RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ATP10B (Homo sapiens)

Ensembl gene IDs: ENSG00000118322

Ensembl transcript IDs: ENST00000326831.7, ENST00000327245.10, ENST00000517802.5, ENST00000517815.1, ENST00000518411.5, ENST00000520098.5, ENST00000520108.1, ENST00000520975.1, ENST00000521033.5, ENST00000522169.1, ENST00000523758.1, ENST00000642502.1

Found 974 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ATTAGCTCCAGGACAGTGCTGCAAATGGCCCTTCCAGTCCAGGTTTaGCAGGAAGATGGTCAGAGGGCCAGCTCCCTGTGTCATTTGCCA +
Preference number: 1 (lower is better)
Translates to: ISSRTVLQMALPVQV*QEDGQRASSLCHLP
Trigger: TGGCAAATGACACAGGGAGCTGGCCCTCTGACCATCTTCCTGGCAAACCTGGACTGGAAGGGCCATTTGCAGCACTGTCCTGGAGCTAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR TCA 90 bp ATTGGGCTGGATGACTTCCAGGGTCCTCTAGACTCCAAGATTCAGTaGTCTGTTGGGGGTTGGGTGCTTCCCTGGTGTACCCAAATCCCA +
Preference number: 1 (lower is better)
Translates to: IGLDDFQGPLDSKIQ*SVGGWVLPWCTQIP
Trigger: TGGGATTTGGGTACACCAGGGAAGCACCCAACCCCCAACAGATCACTGAATCTTGGAGTCTAGAGGACCCTGGAAGTCATCCAGCCCAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520108.1
3UTR GCA 90 bp CACTTTGCCAGGTATGTGTACCTGCCCCTTATTGGGCAATCCTCATaGAGGATTCCTCCAAATACCCACCAGCTGGCTAGTGCTGGCATC +
Preference number: 1 (lower is better)
Translates to: HFARYVYLPLIGQSS*RIPPNTHQLASAGI
Trigger: GATGCCAGCACTAGCCAGCTGGTGGGTATTTGGAGGAATCCTGCATGAGGATTGCCCAATAAGGGGCAGGTACACATACCTGGCAAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR CCA 90 bp GACAGTGCTGCAAATGGCCCTTCCAGTCCAGGTTTGCCAGGAAGATaGTCAGAGGGCCAGCTCCCTGTGTCATTTGCCAACTTGATTGAA +
Preference number: 1 (lower is better)
Translates to: DSAANGPSSPGLPGR*SEGQLPVSFANLIE
Trigger: TTCAATCAAGTTGGCAAATGACACAGGGAGCTGGCCCTCTGACCATCTTCCTGGCAAACCTGGACTGGAAGGGCCATTTGCAGCACTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR TCA 90 bp CCCTGGTGTACCCAAATCCCACCTAGAAGCCTGTGTCCTCTTGGTTaGGGGGTTGCTCTACACGTTGATATCTGCAGATATCAATACAGA +
Preference number: 1 (lower is better)
Translates to: PWCTQIPPRSLCPLG*GVALHVDICRYQYR
Trigger: TCTGTATTGATATCTGCAGATATCAACGTGTAGAGCAACCCCTCAACCAAGAGGACACAGGCTTCTAGGTGGGATTTGGGTACACCAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520108.1
3UTR CCA 90 bp ATGTCAAGCCTGGGAAGAAAGGCAGTTCTAATCAACTTGCAGGTGTaGCATTCTGCTTCAAGCCACCTGCATCCTAGAGAGCAAGGATTC +
Preference number: 1 (lower is better)
Translates to: MSSLGRKAVLINLQV*HSASSHLHPREQGF
Trigger: GAATCCTTGCTCTCTAGGATGCAGGTGGCTTGAAGCAGAATGCCACACCTGCAAGTTGATTAGAACTGCCTTTCTTCCCAGGCTTGACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR GCA 90 bp CTGGAAACAATTCACATCATCATCACTTTGCCAGGTATGTGTACCTaGCCCTTATTGGGCAATCCTCATGCAGGATTCCTCCAAATACCC +
Preference number: 1 (lower is better)
Translates to: LETIHIIITLPGMCT*PLLGNPHAGFLQIP
Trigger: GGGTATTTGGAGGAATCCTGCATGAGGATTGCCCAATAAGGGGCAGGTACACATACCTGGCAAAGTGATGATGATGTGAATTGTTTCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR CCA 90 bp CTGAGCAAGAGACTTAGCCCCAGTAGTCTTCAGTTTCCTTATCTGTaGGGAAATGGGGAGACTAGACCAATAGTAGAATTTGGGAGAGGT +
Preference number: 1 (lower is better)
Translates to: LSKRLSPSSLQFPYL*GNGETRPIVEFGRG
Trigger: ACCTCTCCCAAATTCTACTATTGGTCTAGTCTCCCCATTTCCCCACAGATAAGGAAACTGAAGACTACTGGGGCTAAGTCTCTTGCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520108.1
3UTR-3UTR CCA 90 bp GGGTCCTCTAGACTCCAAGATTCAGTGATCTGTTGGGGGTTGGGTGCTTCCCTGAAGCCTGTGTCCTCTTaGTTGAGGGGTTGCTCTACA +
Preference number: 2 (lower is better)
Translates to: GSSRLQDSVICWGLGASLKPVSS*LRGCST
Trigger: TGTAGAGCAACCCCTCAACCAAGAGGACACAGGCTT...CAGGGAAGCACCCAACCCCCAACAGATCACTGAATCTTGGAGTCTAGAGGACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520108.1
3UTR-3UTR GCA 90 bp ACATCATCATCACTTTGCCAGGTATGTGTACCTGCCCCTTATTGGGCAATCCTCGCTCCAGGACAGTGCTaGAAATGGCCCTTCCAGTCC +
Preference number: 2 (lower is better)
Translates to: TSSSLCQVCVPAPYWAILAPGQC*KWPFQS
Trigger: GGACTGGAAGGGCCATTTGCAGCACTGTCCTGGAGC...GAGGATTGCCCAATAAGGGGCAGGTACACATACCTGGCAAAGTGATGATGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR-3UTR CCA 90 bp TGTGGCATTCTGCTTCAAGCCACCTGCATCCTAGAGAGCAAGGATTCAAACTCAGGTTTGCCAGGAAGATaGTCAGAGGGCCAGCTCCCT +
Preference number: 2 (lower is better)
Translates to: CGILLQATCILESKDSNSGLPGR*SEGQLP
Trigger: AGGGAGCTGGCCCTCTGACCATCTTCCTGGCAAACC...TGAGTTTGAATCCTTGCTCTCTAGGATGCAGGTGGCTTGAAGCAGAATGCCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR-3UTR TCA 90 bp GCAAGAGACTTAGCCCCAGTAGTCTTCAGTTTCCTTATCTGTGGGGAAATGGGGCTGTGTCCTCTTGGTTaGGGGGTTGCTCTACACGTT +
Preference number: 2 (lower is better)
Translates to: ARDLAPVVFSFLICGEMGLCPLG*GVALHV
Trigger: AACGTGTAGAGCAACCCCTCAACCAAGAGGACACAG...CCCCATTTCCCCACAGATAAGGAAACTGAAGACTACTGGGGCTAAGTCTCTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000520108.1
3UTR-3UTR GCA 90 bp TCACTTTGCCAGGTATGTGTACCTGCCCCTTATTGGGCAATCCTCATGCAGGATAACAGGGGTCTCTGGTaGACCCGTTCCCTTTTGCAT +
Preference number: 2 (lower is better)
Translates to: SLCQVCVPAPYWAILMQDNRGLW*TRSLLH
Trigger: ATGCAAAAGGGAACGGGTGCACCAGAGACCCCTGTT...ATCCTGCATGAGGATTGCCCAATAAGGGGCAGGTACACATACCTGGCAAAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR-3UTR CCA 90 bp CTGGTGCACCCGTTCCCTTTTGCATGTCTATTCTTCATGCCTCTTACACTAGCTTTGTGTCAGACCCCTTaGGGCCAGCACTTCCTCCAT +
Preference number: 2 (lower is better)
Translates to: LVHPFPFACLFFMPLTLALCQTP*GQHFLH
Trigger: ATGGAGGAAGTGCTGGCCCCAAGGGGTCTGACACAA...AGCTAGTGTAAGAGGCATGAAGAATAGACATGCAAAAGGGAACGGGTGCACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR-3UTR CCA 90 bp TCACTTTGCCAGGTATGTGTACCTGCCCCTTATTGGGCAATCCTCATGCAGGATAGATTCCCCAGCTGGTaGGACATATGGTCTGTCAGC +
Preference number: 2 (lower is better)
Translates to: SLCQVCVPAPYWAILMQDRFPSW*DIWSVS
Trigger: GCTGACAGACCATATGTCCCACCAGCTGGGGAATCT...ATCCTGCATGAGGATTGCCCAATAAGGGGCAGGTACACATACCTGGCAAAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR-3UTR GCA 90 bp TCACTTTGCCAGGTATGTGTACCTGCCCCTTATTGGGCAATCCTCATGCAGGATAGAACCAACTCGCTGTaGCTGGAAGGGATGTTAACC +
Preference number: 2 (lower is better)
Translates to: SLCQVCVPAPYWAILMQDRTNSL*LEGMLT
Trigger: GGTTAACATCCCTTCCAGGCACAGCGAGTTGGTTCT...ATCCTGCATGAGGATTGCCCAATAAGGGGCAGGTACACATACCTGGCAAAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR-3UTR GCA 90 bp TGTGGCATTCTGCTTCAAGCCACCTGCATCCTAGAGAGCAAGGATTCAAACTCAAACAGGGGTCTCTGGTaGACCCGTTCCCTTTTGCAT +
Preference number: 2 (lower is better)
Translates to: CGILLQATCILESKDSNSNRGLW*TRSLLH
Trigger: ATGCAAAAGGGAACGGGTGCACCAGAGACCCCTGTT...TGAGTTTGAATCCTTGCTCTCTAGGATGCAGGTGGCTTGAAGCAGAATGCCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR-3UTR CCA 90 bp TCACTTTGCCAGGTATGTGTACCTGCCCCTTATTGGGCAATCCTCATGCAGGATGGACCAGTGACTAGGTaGCCTCTGTTGAGTTTGTAC +
Preference number: 2 (lower is better)
Translates to: SLCQVCVPAPYWAILMQDGPVTR*PLLSLY
Trigger: GTACAAACTCAACAGAGGCCACCTAGTCACTGGTCC...ATCCTGCATGAGGATTGCCCAATAAGGGGCAGGTACACATACCTGGCAAAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR-3UTR CCA 90 bp TGTGGCATTCTGCTTCAAGCCACCTGCATCCTAGAGAGCAAGGATTCAAACTCATGCCCACAGCAGACCTaGCTTCTTTGGACAGCCTAT +
Preference number: 2 (lower is better)
Translates to: CGILLQATCILESKDSNSCPQQT*LLWTAY
Trigger: ATAGGCTGTCCAAAGAAGCCAGGTCTGCTGTGGGCA...TGAGTTTGAATCCTTGCTCTCTAGGATGCAGGTGGCTTGAAGCAGAATGCCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR CAA 90 bp CCAGGAAGATGGTCAGAGGGCCAGCTCCCTGTGTCATTTGCCAACTaGATTGAATGTTTTCTGGCATCTTTGCTGAGGAGGTTCTCAAGT +
Preference number: 2 (lower is better)
Translates to: PGRWSEGQLPVSFAN*IECFLASLLRRFSS
Trigger: ACTTGAGAACCTCCTCAGCAAAGATGCCAGAAAACATTCAATCAAGTTGGCAAATGACACAGGGAGCTGGCCCTCTGACCATCTTCCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR CAA 90 bp TGCTTCCCTGGTGTACCCAAATCCCACCTAGAAGCCTGTGTCCTCTaGGTTGAGGGGTTGCTCTACACGTTGATATCTGCAGATATCAAT +
Preference number: 2 (lower is better)
Translates to: CFPGVPKSHLEACVL*VEGLLYTLISADIN
Trigger: ATTGATATCTGCAGATATCAACGTGTAGAGCAACCCCTCAACCAAGAGGACACAGGCTTCTAGGTGGGATTTGGGTACACCAGGGAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520108.1
3UTR-3UTR GCA 90 bp GCTGTGCCTGGAAGGGATGTTAACCCCGATTCAGCCATTACTGCAATACACTTGACTGTTTGCAAGATGTaGTGCCTGAGAGCAGCAGAA +
Preference number: 2 (lower is better)
Translates to: AVPGRDVNPDSAITAIHLTVCKM*CLRAAE
Trigger: TTCTGCTGCTCTCAGGCAGCACATCTTGCAAACAGT...CAAGTGTATTGCAGTAATGGCTGAATCGGGGTTAACATCCCTTCCAGGCACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR-3UTR GCA 90 bp GGGGTTGGGTGCTTCCCTGGTGTACCCAAATCCCACCTAGAAGCCTGTGTCCTCCTACACGTTGATATCTaGAGATATCAATACAGAGAA +
Preference number: 2 (lower is better)
Translates to: GVGCFPGVPKSHLEACVLLHVDI*RYQYRE
Trigger: TTCTCTGTATTGATATCTGCAGATATCAACGTGTAG...GAGGACACAGGCTTCTAGGTGGGATTTGGGTACACCAGGGAAGCACCCAACCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520108.1
3UTR-3UTR CCA 90 bp ACATCATCATCACTTTGCCAGGTATGTGTACCTGCCCCTTATTGGGCAATCCTCGGACCAGTGACTAGGTaGCCTCTGTTGAGTTTGTAC +
Preference number: 2 (lower is better)
Translates to: TSSSLCQVCVPAPYWAILGPVTR*PLLSLY
Trigger: GTACAAACTCAACAGAGGCCACCTAGTCACTGGTCC...GAGGATTGCCCAATAAGGGGCAGGTACACATACCTGGCAAAGTGATGATGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR-3UTR CCA 90 bp TCACTTTGCCAGGTATGTGTACCTGCCCCTTATTGGGCAATCCTCATGCAGGATGGAAACTTACGGCACTaGGTTGTAGGCTACGCTTAT +
Preference number: 2 (lower is better)
Translates to: SLCQVCVPAPYWAILMQDGNLRH*VVGYAY
Trigger: ATAAGCGTAGCCTACAACCCAGTGCCGTAAGTTTCC...ATCCTGCATGAGGATTGCCCAATAAGGGGCAGGTACACATACCTGGCAAAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR-3UTR CCA 90 bp ACATCATCATCACTTTGCCAGGTATGTGTACCTGCCCCTTATTGGGCAATCCTCAGCTGGTGGGACATATaGTCTGTCAGCCAAAACAGG +
Preference number: 2 (lower is better)
Translates to: TSSSLCQVCVPAPYWAILSWWDI*SVSQNR
Trigger: CCTGTTTTGGCTGACAGACCATATGTCCCACCAGCT...GAGGATTGCCCAATAAGGGGCAGGTACACATACCTGGCAAAGTGATGATGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR-3UTR CCA 90 bp GCTGGTGGCATGACTCGTAGGCTCAAAGACTCACCACACTTATTGCATCTATTTGTGTCTTCCAGAGGCTaGAAGGGGGTTTCAGCCTAT +
Preference number: 2 (lower is better)
Translates to: AGGMTRRLKDSPHLLHLFVSSRG*KGVSAY
Trigger: ATAGGCTGAAACCCCCTTCCAGCCTCTGGAAGACAC...AAATAGATGCAATAAGTGTGGTGAGTCTTTGAGCCTACGAGTCATGCCACCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR-3UTR TCA 90 bp ACATCATCATCACTTTGCCAGGTATGTGTACCTGCCCCTTATTGGGCAATCCTCCTAGGTGGCCTCTGTTaGGTTTGTACAGATTTCTGC +
Preference number: 2 (lower is better)
Translates to: TSSSLCQVCVPAPYWAILLGGLC*VCTDFC
Trigger: GCAGAAATCTGTACAAACTCAACAGAGGCCACCTAG...GAGGATTGCCCAATAAGGGGCAGGTACACATACCTGGCAAAGTGATGATGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR-3UTR TCA 90 bp GCTGTGCCTGGAAGGGATGTTAACCCCGATTCAGCCATTACTGCAATACACTTGACATTGTTTCCTCTATaGAGAAGAAGGGGTCAAGGG +
Preference number: 2 (lower is better)
Translates to: AVPGRDVNPDSAITAIHLTLFPL*RRRGQG
Trigger: CCCTTGACCCCTTCTTCTTCATAGAGGAAACAATGT...CAAGTGTATTGCAGTAATGGCTGAATCGGGGTTAACATCCCTTCCAGGCACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR-3UTR TCA 90 bp GCTGTGCCTGGAAGGGATGTTAACCCCGATTCAGCCATTACTGCAATACACTTGTGCACAAGTCTCTTCTaGAACTTTAACTCTGGGCAC +
Preference number: 2 (lower is better)
Translates to: AVPGRDVNPDSAITAIHLCTSLF*NFNSGH
Trigger: GTGCCCAGAGTTAAAGTTTCAGAAGAGACTTGTGCA...CAAGTGTATTGCAGTAATGGCTGAATCGGGGTTAACATCCCTTCCAGGCACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR-3UTR GCA 90 bp ACATCATCATCACTTTGCCAGGTATGTGTACCTGCCCCTTATTGGGCAATCCTCGTTTGCAAGATGTGCTaGCTGAGAGCAGCAGAAAAC +
Preference number: 2 (lower is better)
Translates to: TSSSLCQVCVPAPYWAILVCKMC*LRAAEN
Trigger: GTTTTCTGCTGCTCTCAGGCAGCACATCTTGCAAAC...GAGGATTGCCCAATAAGGGGCAGGTACACATACCTGGCAAAGTGATGATGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR-3UTR CCA 90 bp TTTTACAAGACTAGGGTTAGGCTATACTTGCCCACAGCAGACCTGGCTTCTTTGAAACTAGAGGCCGACTaGGTTTCCCGTCTTTGTGTC +
Preference number: 2 (lower is better)
Translates to: FYKTRVRLYLPTADLASLKLEAD*VSRLCV
Trigger: GACACAAAGACGGGAAACCCAGTCGGCCTCTAGTTT...CAAAGAAGCCAGGTCTGCTGTGGGCAAGTATAGCCTAACCCTAGTCTTGTAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR-3UTR CCA 90 bp CAATTCACATCATCATCACTTTGCCAGGTATGTGTACCTGCCCCTTATTGGGCAAAACTAGAGGCCGACTaGGTTTCCCGTCTTTGTGTC +
Preference number: 2 (lower is better)
Translates to: QFTSSSLCQVCVPAPYWAKLEAD*VSRLCV
Trigger: GACACAAAGACGGGAAACCCAGTCGGCCTCTAGTTT...TGCCCAATAAGGGGCAGGTACACATACCTGGCAAAGTGATGATGATGTGAATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR-3UTR CCA 90 bp ACCAACTCGCTGTGCCTGGAAGGGATGTTAACCCCGATTCAGCCATTACTGCAAACACTTCTTGAATCTTaGAAACTTACGGCACTGGGT +
Preference number: 2 (lower is better)
Translates to: TNSLCLEGMLTPIQPLLQTLLES*KLTALG
Trigger: ACCCAGTGCCGTAAGTTTCCAAGATTCAAGAAGTGT...TTGCAGTAATGGCTGAATCGGGGTTAACATCCCTTCCAGGCACAGCGAGTTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR-3UTR CCA 90 bp GCTGGTGGCATGACTCGTAGGCTCAAAGACTCACCACACTTATTGCATCTATTTGGTTGCCCTATCATATaGGCCTATTCTGGGTGCAGA +
Preference number: 2 (lower is better)
Translates to: AGGMTRRLKDSPHLLHLFGCPII*AYSGCR
Trigger: TCTGCACCCAGAATAGGCCCATATGATAGGGCAACC...AAATAGATGCAATAAGTGTGGTGAGTCTTTGAGCCTACGAGTCATGCCACCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR CAA 90 bp TTTGAGAACTCGATTCAACAAAAACAGCCTCCTTCTCCAAACTGTTaGCAAGATGTGCTGCCTGAGAGCAGCAGAAAACTAGAGGCCGAC +
Preference number: 2 (lower is better)
Translates to: FENSIQQKQPPSPNC*QDVLPESSRKLEAD
Trigger: GTCGGCCTCTAGTTTTCTGCTGCTCTCAGGCAGCACATCTTGCAAACAGTTTGGAGAAGGAGGCTGTTTTTGTTGAATCGAGTTCTCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR CAA 90 bp TTAATACCTATGTCAAGCCTGGGAAGAAAGGCAGTTCTAATCAACTaGCAGGTGTGGCATTCTGCTTCAAGCCACCTGCATCCTAGAGAG +
Preference number: 2 (lower is better)
Translates to: LIPMSSLGRKAVLIN*QVWHSASSHLHPRE
Trigger: CTCTCTAGGATGCAGGTGGCTTGAAGCAGAATGCCACACCTGCAAGTTGATTAGAACTGCCTTTCTTCCCAGGCTTGACATAGGTATTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR CAA 90 bp GTCACAGTTGGCTTGATTTACAGAGGGGCAAGAGTAGGTGACCAGTaGTACCAGTTGCTCCAGTTTCCTAGGATTTGGGACTCTGTAAAA +
Preference number: 2 (lower is better)
Translates to: VTVGLIYRGARVGDQ*YQLLQFPRIWDSVK
Trigger: TTTTACAGAGTCCCAAATCCTAGGAAACTGGAGCAACTGGTACAACTGGTCACCTACTCTTGCCCCTCTGTAAATCAAGCCAACTGTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR-3UTR TCA 90 bp GGTGGCATGACTCGTAGGCTCAAAGACTCACCACACTTATTGCATCTATTTCTGCTAGGTGGCCTCTGTTaGGTTTGTACAGATTTCTGC +
Preference number: 2 (lower is better)
Translates to: GGMTRRLKDSPHLLHLFLLGGLC*VCTDFC
Trigger: GCAGAAATCTGTACAAACTCAACAGAGGCCACCTAG...CAGAAATAGATGCAATAAGTGTGGTGAGTCTTTGAGCCTACGAGTCATGCCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR-3UTR TCA 90 bp GCTGTGCCTGGAAGGGATGTTAACCCCGATTCAGCCATTACTGCAATACACTTGGAAACTTCCATATCCTaGGATATTGCCTGGGTTGAT +
Preference number: 2 (lower is better)
Translates to: AVPGRDVNPDSAITAIHLETSIS*DIAWVD
Trigger: ATCAACCCAGGCAATATCTCAGGATATGGAAGTTTC...CAAGTGTATTGCAGTAATGGCTGAATCGGGGTTAACATCCCTTCCAGGCACAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR-3UTR TCA 90 bp CTGGTGCACCCGTTCCCTTTTGCATGTCTATTCTTCATGCCTCTTACACTAGCTTTTAACTCTGGGCACTaGGGGGTAAATAAACCCAGA +
Preference number: 2 (lower is better)
Translates to: LVHPFPFACLFFMPLTLAFNSGH*GVNKPR
Trigger: TCTGGGTTTATTTACCCCTCAGTGCCCAGAGTTAAA...AGCTAGTGTAAGAGGCATGAAGAATAGACATGCAAAAGGGAACGGGTGCACCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR-3UTR TCA 90 bp CTGGTGCACCCGTTCCCTTTTGCATGTCTATTCTTCATGCCTCTTACACTAGCTGCAATACACTTGAGATaGAGCCCTTATGTGCACAAG +
Preference number: 2 (lower is better)
Translates to: LVHPFPFACLFFMPLTLAAIHLR*SPYVHK
Trigger: CTTGTGCACATAAGGGCTTCATCTCAAGTGTATTGC...AGCTAGTGTAAGAGGCATGAAGAATAGACATGCAAAAGGGAACGGGTGCACCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR-3UTR GCA 90 bp TTTTACAAGACTAGGGTTAGGCTATACTTGCCCACAGCAGACCTGGCTTCTTTGACTGTTTGCAAGATGTaGTGCCTGAGAGCAGCAGAA +
Preference number: 2 (lower is better)
Translates to: FYKTRVRLYLPTADLASLTVCKM*CLRAAE
Trigger: TTCTGCTGCTCTCAGGCAGCACATCTTGCAAACAGT...CAAAGAAGCCAGGTCTGCTGTGGGCAAGTATAGCCTAACCCTAGTCTTGTAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR-3UTR GCA 90 bp GGTGGCATGACTCGTAGGCTCAAAGACTCACCACACTTATTGCATCTATTTCTGGCACCCGTTCCCTTTTaGATGTCTATTCTTCATGCC +
Preference number: 2 (lower is better)
Translates to: GGMTRRLKDSPHLLHLFLAPVPF*MSILHA
Trigger: GGCATGAAGAATAGACATGCAAAAGGGAACGGGTGC...CAGAAATAGATGCAATAAGTGTGGTGAGTCTTTGAGCCTACGAGTCATGCCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR-3UTR GCA 90 bp GGTGGCATGACTCGTAGGCTCAAAGACTCACCACACTTATTGCATCTATTTCTGTGGGCCTATTCTGGGTaGAGATGTGCTTATATCTCC +
Preference number: 2 (lower is better)
Translates to: GGMTRRLKDSPHLLHLFLWAYSG*RCAYIS
Trigger: GGAGATATAAGCACATCTGCACCCAGAATAGGCCCA...CAGAAATAGATGCAATAAGTGTGGTGAGTCTTTGAGCCTACGAGTCATGCCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR-3UTR CCA 90 bp CAATTCACATCATCATCACTTTGCCAGGTATGTGTACCTGCCCCTTATTGGGCACCAGCACTTCCTCCATaGAAGTCAAGGTTGTTGAAG +
Preference number: 2 (lower is better)
Translates to: QFTSSSLCQVCVPAPYWAPALPP*KSRLLK
Trigger: CTTCAACAACCTTGACTTCCATGGAGGAAGTGCTGG...TGCCCAATAAGGGGCAGGTACACATACCTGGCAAAGTGATGATGATGTGAATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR-3UTR CCA 90 bp TCACTTTGCCAGGTATGTGTACCTGCCCCTTATTGGGCAATCCTCATGCAGGATCATATGGGCCTATTCTaGGTGCAGATGTGCTTATAT +
Preference number: 2 (lower is better)
Translates to: SLCQVCVPAPYWAILMQDHMGLF*VQMCLY
Trigger: ATATAAGCACATCTGCACCCAGAATAGGCCCATATG...ATCCTGCATGAGGATTGCCCAATAAGGGGCAGGTACACATACCTGGCAAAGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR-3UTR CCA 90 bp GCTGGTGGCATGACTCGTAGGCTCAAAGACTCACCACACTTATTGCATCTATTTAGCCTATCCCCATTCTaGAATAGGCTGAATGGGGTT +
Preference number: 2 (lower is better)
Translates to: AGGMTRRLKDSPHLLHLFSLSPF*NRLNGV
Trigger: AACCCCATTCAGCCTATTCCAGAATGGGGATAGGCT...AAATAGATGCAATAAGTGTGGTGAGTCTTTGAGCCTACGAGTCATGCCACCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR-3UTR CCA 90 bp GGTGGCATGACTCGTAGGCTCAAAGACTCACCACACTTATTGCATCTATTTCTGAGCCTATCCCCATTCTaGAATAGGCTGAATGGGGTT +
Preference number: 2 (lower is better)
Translates to: GGMTRRLKDSPHLLHLFLSLSPF*NRLNGV
Trigger: AACCCCATTCAGCCTATTCCAGAATGGGGATAGGCT...CAGAAATAGATGCAATAAGTGTGGTGAGTCTTTGAGCCTACGAGTCATGCCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR CAA 90 bp CTCCCTGTGTCATTTGCCAACTTGATTGAATGTTTTCTGGCATCTTaGCTGAGGAGGTTCTCAAGTGATAGGTCAACTTATGGCTGGTGG +
Preference number: 2 (lower is better)
Translates to: LPVSFANLIECFLAS*LRRFSSDRSTYGWW
Trigger: CCACCAGCCATAAGTTGACCTATCACTTGAGAACCTCCTCAGCAAAGATGCCAGAAAACATTCAATCAAGTTGGCAAATGACACAGGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR CAA 90 bp TTTGACTCAATCCCCTCACTGGAAACAATTCACATCATCATCACTTaGCCAGGTATGTGTACCTGCCCCTTATTGGGCAATCCTCATGCA +
Preference number: 2 (lower is better)
Translates to: FDSIPSLETIHIIIT*PGMCTCPLLGNPHA
Trigger: TGCATGAGGATTGCCCAATAAGGGGCAGGTACACATACCTGGCAAAGTGATGATGATGTGAATTGTTTCCAGTGAGGGGATTGAGTCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR-3UTR TCA 90 bp GGTGGCATGACTCGTAGGCTCAAAGACTCACCACACTTATTGCATCTATTTCTGGCAATACACTTGAGATaGAGCCCTTATGTGCACAAG +
Preference number: 2 (lower is better)
Translates to: GGMTRRLKDSPHLLHLFLAIHLR*SPYVHK
Trigger: CTTGTGCACATAAGGGCTTCATCTCAAGTGTATTGC...CAGAAATAGATGCAATAAGTGTGGTGAGTCTTTGAGCCTACGAGTCATGCCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR-3UTR TCA 90 bp ACATCATCATCACTTTGCCAGGTATGTGTACCTGCCCCTTATTGGGCAATCCTCTTACTGCAATACACTTaGGATGAAGCCCTTATGTGC +
Preference number: 2 (lower is better)
Translates to: TSSSLCQVCVPAPYWAILLLQYT*DEALMC
Trigger: GCACATAAGGGCTTCATCTCAAGTGTATTGCAGTAA...GAGGATTGCCCAATAAGGGGCAGGTACACATACCTGGCAAAGTGATGATGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR-3UTR GCA 90 bp TTGCTCCAGTTTCCTAGGATTTGGGACTCTGTAAAAATGAGAAAGTCCCAGGCAGTTTGCAAGATGTGCTaGCTGAGAGCAGCAGAAAAC +
Preference number: 2 (lower is better)
Translates to: LLQFPRIWDSVKMRKSQAVCKMC*LRAAEN
Trigger: GTTTTCTGCTGCTCTCAGGCAGCACATCTTGCAAAC...TGCCTGGGACTTTCTCATTTTTACAGAGTCCCAAATCCTAGGAAACTGGAGCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR-3UTR GCA 90 bp AGGCTATACTTGCCCACAGCAGACCTGGCTTCTTTGGACAGCCTATTAAAATTCCTTCTCCAAACTGTTTaGAAGATGTGCTGCCTGAGA +
Preference number: 2 (lower is better)
Translates to: RLYLPTADLASLDSLLKFLLQTV*KMCCLR
Trigger: TCTCAGGCAGCACATCTTGCAAACAGTTTGGAGAAG...GAATTTTAATAGGCTGTCCAAAGAAGCCAGGTCTGCTGTGGGCAAGTATAGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR-3UTR CCA 90 bp TTGCTCCAGTTTCCTAGGATTTGGGACTCTGTAAAAATGAGAAAGTCCCAGGCACCAGCACTTCCTCCATaGAAGTCAAGGTTGTTGAAG +
Preference number: 2 (lower is better)
Translates to: LLQFPRIWDSVKMRKSQAPALPP*KSRLLK
Trigger: CTTCAACAACCTTGACTTCCATGGAGGAAGTGCTGG...TGCCTGGGACTTTCTCATTTTTACAGAGTCCCAAATCCTAGGAAACTGGAGCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR-3UTR CCA 90 bp CTGGTGCACCCGTTCCCTTTTGCATGTCTATTCTTCATGCCTCTTACACTAGCTAGAGGGTCAGAAGAATaGCTTTGGTCTAAACCGATT +
Preference number: 2 (lower is better)
Translates to: LVHPFPFACLFFMPLTLARGSEE*LWSKPI
Trigger: AATCGGTTTAGACCAAAGCCATTCTTCTGACCCTCT...AGCTAGTGTAAGAGGCATGAAGAATAGACATGCAAAAGGGAACGGGTGCACCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR-3UTR CCA 90 bp TTGCTCCAGTTTCCTAGGATTTGGGACTCTGTAAAAATGAGAAAGTCCCAGGCAGGAAACTTACGGCACTaGGTTGTAGGCTACGCTTAT +
Preference number: 2 (lower is better)
Translates to: LLQFPRIWDSVKMRKSQAGNLRH*VVGYAY
Trigger: ATAAGCGTAGCCTACAACCCAGTGCCGTAAGTTTCC...TGCCTGGGACTTTCTCATTTTTACAGAGTCCCAAATCCTAGGAAACTGGAGCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR-3UTR CCA 90 bp ACATCATCATCACTTTGCCAGGTATGTGTACCTGCCCCTTATTGGGCAATCCTCACACTTCTTGAATCTTaGAAACTTACGGCACTGGGT +
Preference number: 2 (lower is better)
Translates to: TSSSLCQVCVPAPYWAILTLLES*KLTALG
Trigger: ACCCAGTGCCGTAAGTTTCCAAGATTCAAGAAGTGT...GAGGATTGCCCAATAAGGGGCAGGTACACATACCTGGCAAAGTGATGATGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR-3UTR CCA 90 bp TCTTTTCCCTGTGAAGTGACACTTGCTCTGACTCTAACTGATGCAGGCCAGTGTCATATGGGCCTATTCTaGGTGCAGATGTGCTTATAT +
Preference number: 2 (lower is better)
Translates to: SFPCEVTLALTLTDAGQCHMGLF*VQMCLY
Trigger: ATATAAGCACATCTGCACCCAGAATAGGCCCATATG...ACACTGGCCTGCATCAGTTAGAGTCAGAGCAAGTGTCACTTCACAGGGAAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR-3UTR TCA 90 bp GCTGGTGGCATGACTCGTAGGCTCAAAGACTCACCACACTTATTGCATCTATTTGAAACTTCCATATCCTaGGATATTGCCTGGGTTGAT +
Preference number: 2 (lower is better)
Translates to: AGGMTRRLKDSPHLLHLFETSIS*DIAWVD
Trigger: ATCAACCCAGGCAATATCTCAGGATATGGAAGTTTC...AAATAGATGCAATAAGTGTGGTGAGTCTTTGAGCCTACGAGTCATGCCACCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR-3UTR TCA 90 bp GCTGGTGGCATGACTCGTAGGCTCAAAGACTCACCACACTTATTGCATCTATTTTTACTGCAATACACTTaGGATGAAGCCCTTATGTGC +
Preference number: 2 (lower is better)
Translates to: AGGMTRRLKDSPHLLHLFLLQYT*DEALMC
Trigger: GCACATAAGGGCTTCATCTCAAGTGTATTGCAGTAA...AAATAGATGCAATAAGTGTGGTGAGTCTTTGAGCCTACGAGTCATGCCACCAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR-3UTR TCA 90 bp TCACTTTGCCAGGTATGTGTACCTGCCCCTTATTGGGCAATCCTCATGCAGGATTGTCATTTGCCAACTTaGTTGAATGTTTTCTGGCAT +
Preference number: 2 (lower is better)
Translates to: SLCQVCVPAPYWAILMQDCHLPT*LNVFWH
Trigger: ATGCCAGAAAACATTCAATCAAGTTGGCAAATGACA...ATCCTGCATGAGGATTGCCCAATAAGGGGCAGGTACACATACCTGGCAAAGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR-3UTR TCA 90 bp TATCTGTGGGGAAATGGGGAGACTAGACCAATAGTAGAATTTGGGAGAGGTAAAAGCCATGTGTGGGGATaGGATAAAGGATATTGGGCT +
Preference number: 2 (lower is better)
Translates to: YLWGNGETRPIVEFGRGKSHVWG*DKGYWA
Trigger: AGCCCAATATCCTTTATCTCATCCCCACACATGGCT...TTTACCTCTCCCAAATTCTACTATTGGTCTAGTCTCCCCATTTCCCCACAGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000520108.1
3UTR-3UTR GCA 90 bp TCTTTTCCCTGTGAAGTGACACTTGCTCTGACTCTAACTGATGCAGGCCAGTGTCGATTCAGCCATTACTaGAATACACTTGAGATGAAG +
Preference number: 2 (lower is better)
Translates to: SFPCEVTLALTLTDAGQCRFSHY*NTLEMK
Trigger: CTTCATCTCAAGTGTATTGCAGTAATGGCTGAATCG...ACACTGGCCTGCATCAGTTAGAGTCAGAGCAAGTGTCACTTCACAGGGAAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR-3UTR CCA 90 bp TTTTACAAGACTAGGGTTAGGCTATACTTGCCCACAGCAGACCTGGCTTCTTTGAGAGGGTCAGAAGAATaGCTTTGGTCTAAACCGATT +
Preference number: 2 (lower is better)
Translates to: FYKTRVRLYLPTADLASLRGSEE*LWSKPI
Trigger: AATCGGTTTAGACCAAAGCCATTCTTCTGACCCTCT...CAAAGAAGCCAGGTCTGCTGTGGGCAAGTATAGCCTAACCCTAGTCTTGTAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR-3UTR CCA 90 bp TGTTATAGGGGAATAGTGGTTATAACTTTTCCCTGTAAGATGGCACATTGGATGAGATTCCCCAGCTGGTaGGACATATGGTCTGTCAGC +
Preference number: 2 (lower is better)
Translates to: CYRGIVVITFPCKMAHWMRFPSW*DIWSVS
Trigger: GCTGACAGACCATATGTCCCACCAGCTGGGGAATCT...CATCCAATGTGCCATCTTACAGGGAAAAGTTATAACCACTATTCCCCTATAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR-3UTR CCA 90 bp TGTGGCATTCTGCTTCAAGCCACCTGCATCCTAGAGAGCAAGGATTCAAACTCACTGTTCTGTTCTTTCTaGCTTTTAGTAGTAGCCAGA +
Preference number: 2 (lower is better)
Translates to: CGILLQATCILESKDSNSLFCSF*LLVVAR
Trigger: TCTGGCTACTACTAAAAGCCAGAAAGAACAGAACAG...TGAGTTTGAATCCTTGCTCTCTAGGATGCAGGTGGCTTGAAGCAGAATGCCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR CAA 90 bp CAGAAACTTCCATATCCTGAGATATTGCCTGGGTTGATACACTTCTaGAATCTTGGAAACTTACGGCACTGGGTTGTAGGCTACGCTTAT +
Preference number: 2 (lower is better)
Translates to: QKLPYPEILPGLIHF*NLGNLRHWVVGYAY
Trigger: ATAAGCGTAGCCTACAACCCAGTGCCGTAAGTTTCCAAGATTCAAGAAGTGTATCAACCCAGGCAATATCTCAGGATATGGAAGTTTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR CAA 90 bp GTAACCCTTTCTGGCTTATTTTACAAGACTAGGGTTAGGCTATACTaGCCCACAGCAGACCTGGCTTCTTTGGACAGCCTATTAAAATTC +
Preference number: 2 (lower is better)
Translates to: VTLSGLFYKTRVRLY*PTADLASLDSLLKF
Trigger: GAATTTTAATAGGCTGTCCAAAGAAGCCAGGTCTGCTGTGGGCAAGTATAGCCTAACCCTAGTCTTGTAAAATAAGCCAGAAAGGGTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR-3UTR TCA 90 bp AAAGAGCAGCATCAGAGTGTTGGCTATAGTTTGGAACTTAGGAACAGGATCAGAACATTGTTTCCTCTATaGAGAAGAAGGGGTCAAGGG +
Preference number: 2 (lower is better)
Translates to: KEQHQSVGYSLELRNRIRTLFPL*RRRGQG
Trigger: CCCTTGACCCCTTCTTCTTCATAGAGGAAACAATGT...TCTGATCCTGTTCCTAAGTTCCAAACTATAGCCAACACTCTGATGCTGCTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR-3UTR TCA 90 bp GACTTAATACCTATGTCAAGCCTGGGAAGAAAGGCAGTTCTAATCAACTTGCAGTTTAACTCTGGGCACTaGGGGGTAAATAAACCCAGA +
Preference number: 2 (lower is better)
Translates to: DLIPMSSLGRKAVLINLQFNSGH*GVNKPR
Trigger: TCTGGGTTTATTTACCCCTCAGTGCCCAGAGTTAAA...CTGCAAGTTGATTAGAACTGCCTTTCTTCCCAGGCTTGACATAGGTATTAAGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR-3UTR TCA 90 bp GACTTAATACCTATGTCAAGCCTGGGAAGAAAGGCAGTTCTAATCAACTTGCAGTGCACAAGTCTCTTCTaGAACTTTAACTCTGGGCAC +
Preference number: 2 (lower is better)
Translates to: DLIPMSSLGRKAVLINLQCTSLF*NFNSGH
Trigger: GTGCCCAGAGTTAAAGTTTCAGAAGAGACTTGTGCA...CTGCAAGTTGATTAGAACTGCCTTTCTTCCCAGGCTTGACATAGGTATTAAGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR-3UTR TCA 90 bp TGTTATAGGGGAATAGTGGTTATAACTTTTCCCTGTAAGATGGCACATTGGATGTTATGGCTGGTGGCATaGCTCGTAGGCTCAAAGACT +
Preference number: 2 (lower is better)
Translates to: CYRGIVVITFPCKMAHWMLWLVA*LVGSKT
Trigger: AGTCTTTGAGCCTACGAGTCATGCCACCAGCCATAA...CATCCAATGTGCCATCTTACAGGGAAAAGTTATAACCACTATTCCCCTATAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR-3UTR GCA 90 bp GCTGGTGGCATGACTCGTAGGCTCAAAGACTCACCACACTTATTGCATCTATTTTTCTGGGTGCAGATGTaGTTATATCTCCTGATTTAC +
Preference number: 2 (lower is better)
Translates to: AGGMTRRLKDSPHLLHLFFWVQM*LYLLIY
Trigger: GTAAATCAGGAGATATAAGCACATCTGCACCCAGAA...AAATAGATGCAATAAGTGTGGTGAGTCTTTGAGCCTACGAGTCATGCCACCAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR-3UTR TCA 90 bp GGTGGCATGACTCGTAGGCTCAAAGACTCACCACACTTATTGCATCTATTTCTGTGGTCTAAACCGATTTaGGAACTCGATTCAACAAAA +
Preference number: 2 (lower is better)
Translates to: GGMTRRLKDSPHLLHLFLWSKPI*ELDSTK
Trigger: TTTTGTTGAATCGAGTTCTCAAATCGGTTTAGACCA...CAGAAATAGATGCAATAAGTGTGGTGAGTCTTTGAGCCTACGAGTCATGCCACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR-3UTR TCA 90 bp TTTTACAAGACTAGGGTTAGGCTATACTTGCCCACAGCAGACCTGGCTTCTTTGGTTCTAAGAGCTGAATaGGGATGGGCAATTTTATTT +
Preference number: 2 (lower is better)
Translates to: FYKTRVRLYLPTADLASLVLRAE*GWAILF
Trigger: AAATAAAATTGCCCATCCTCATTCAGCTCTTAGAAC...CAAAGAAGCCAGGTCTGCTGTGGGCAAGTATAGCCTAACCCTAGTCTTGTAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR-3UTR TCA 90 bp AGGCTATACTTGCCCACAGCAGACCTGGCTTCTTTGGACAGCCTATTAAAATTCTTTTGTTCTAAGAGCTaGATGAGGATGGGCAATTTT +
Preference number: 2 (lower is better)
Translates to: RLYLPTADLASLDSLLKFFCSKS*MRMGNF
Trigger: AAAATTGCCCATCCTCATTCAGCTCTTAGAACAAAA...GAATTTTAATAGGCTGTCCAAAGAAGCCAGGTCTGCTGTGGGCAAGTATAGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR-3UTR TCA 90 bp TGTTATAGGGGAATAGTGGTTATAACTTTTCCCTGTAAGATGGCACATTGGATGATATGGCAGAGGCAGTaGAACAGTGTATTAGCTCCA +
Preference number: 2 (lower is better)
Translates to: CYRGIVVITFPCKMAHWMIWQRQ*NSVLAP
Trigger: TGGAGCTAATACACTGTTTCACTGCCTCTGCCATAT...CATCCAATGTGCCATCTTACAGGGAAAAGTTATAACCACTATTCCCCTATAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR-3UTR TCA 90 bp TATCTGTGGGGAAATGGGGAGACTAGACCAATAGTAGAATTTGGGAGAGGTAAAGGTTGCTCTACACGTTaGTATCTGCAGATATCAATA +
Preference number: 2 (lower is better)
Translates to: YLWGNGETRPIVEFGRGKGCSTR*YLQISI
Trigger: TATTGATATCTGCAGATATCAACGTGTAGAGCAACC...TTTACCTCTCCCAAATTCTACTATTGGTCTAGTCTCCCCATTTCCCCACAGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520108.1
3UTR-3UTR TCA 90 bp GACTTAATACCTATGTCAAGCCTGGGAAGAAAGGCAGTTCTAATCAACTTGCAGGTTCTAAGAGCTGAATaGGGATGGGCAATTTTATTT +
Preference number: 2 (lower is better)
Translates to: DLIPMSSLGRKAVLINLQVLRAE*GWAILF
Trigger: AAATAAAATTGCCCATCCTCATTCAGCTCTTAGAAC...CTGCAAGTTGATTAGAACTGCCTTTCTTCCCAGGCTTGACATAGGTATTAAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR-3UTR TCA 90 bp AAAGAGCAGCATCAGAGTGTTGGCTATAGTTTGGAACTTAGGAACAGGATCAGATTTTGTTCTAAGAGCTaGATGAGGATGGGCAATTTT +
Preference number: 2 (lower is better)
Translates to: KEQHQSVGYSLELRNRIRFCSKS*MRMGNF
Trigger: AAAATTGCCCATCCTCATTCAGCTCTTAGAACAAAA...TCTGATCCTGTTCCTAAGTTCCAAACTATAGCCAACACTCTGATGCTGCTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR-3UTR TCA 90 bp AAAGAGCAGCATCAGAGTGTTGGCTATAGTTTGGAACTTAGGAACAGGATCAGATGTCATTTGCCAACTTaGTTGAATGTTTTCTGGCAT +
Preference number: 2 (lower is better)
Translates to: KEQHQSVGYSLELRNRIRCHLPT*LNVFWH
Trigger: ATGCCAGAAAACATTCAATCAAGTTGGCAAATGACA...TCTGATCCTGTTCCTAAGTTCCAAACTATAGCCAACACTCTGATGCTGCTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR GCA 72 bp AGGACAGTGCTGCAAATGGCCCTTCCAGTCCAGGTTTaGCAGGAAGATGGTCAGAGGGCCAGCTCCCTGTGT +
Preference number: 3 (lower is better)
Translates to: RTVLQMALPVQV*QEDGQRASSLC
Trigger: ACACAGGGAGCTGGCCCTCTGACCATCTTCCTGGCAAACCTGGACTGGAAGGGCCATTTGCAGCACTGTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR CCA 72 bp GGCCGACTGGGTTTCCCGTCTTTGTGTCAGACCCCTTaGGGCCAGCACTTCCTCCATGGAAGTCAAGGTTGT +
Preference number: 3 (lower is better)
Translates to: GRLGFPSLCQTP*GQHFLHGSQGC
Trigger: ACAACCTTGACTTCCATGGAGGAAGTGCTGGCCCCAAGGGGTCTGACACAAAGACGGGAAACCCAGTCGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR-3UTR CAA 90 bp GGGTCCTCTAGACTCCAAGATTCAGTGATCTGTTGGGGGTTGGGTGCTTCCCTGCCTGTGTCCTCTTGGTaGAGGGGTTGCTCTACACGT +
Preference number: 3 (lower is better)
Translates to: GSSRLQDSVICWGLGASLPVSSW*RGCSTR
Trigger: ACGTGTAGAGCAACCCCTCAACCAAGAGGACACAGG...CAGGGAAGCACCCAACCCCCAACAGATCACTGAATCTTGGAGTCTAGAGGACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520108.1
3UTR-3UTR CAA 90 bp ACATCATCATCACTTTGCCAGGTATGTGTACCTGCCCCTTATTGGGCAATCCTCCTGGGTTTCCCGTCTTaGTGTCAGACCCCTTGGGGC +
Preference number: 3 (lower is better)
Translates to: TSSSLCQVCVPAPYWAILLGFPS*CQTPWG
Trigger: GCCCCAAGGGGTCTGACACAAAGACGGGAAACCCAG...GAGGATTGCCCAATAAGGGGCAGGTACACATACCTGGCAAAGTGATGATGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR-3UTR CAA 90 bp GCAAGAGACTTAGCCCCAGTAGTCTTCAGTTTCCTTATCTGTGGGGAAATGGGGGTGATCTGTTGGGGGTaGGGTGCTTCCCTGGTGTAC +
Preference number: 3 (lower is better)
Translates to: ARDLAPVVFSFLICGEMGVICWG*GASLVY
Trigger: GTACACCAGGGAAGCACCCAACCCCCAACAGATCAC...CCCCATTTCCCCACAGATAAGGAAACTGAAGACTACTGGGGCTAAGTCTCTTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000520108.1
3UTR-3UTR CAA 90 bp TTTCTTTGGCTTACAGGCAAAAAGCAGAACCAACTCGCTGTGCCTGGAAGGGATTTTGTGTCAGACCCCTaGGGGCCAGCACTTCCTCCA +
Preference number: 3 (lower is better)
Translates to: FLWLTGKKQNQLAVPGRDFVSDP*GPALPP
Trigger: TGGAGGAAGTGCTGGCCCCAAGGGGTCTGACACAAA...ATCCCTTCCAGGCACAGCGAGTTGGTTCTGCTTTTTGCCTGTAAGCCAAAGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR-3UTR CAA 90 bp CTGGTGCACCCGTTCCCTTTTGCATGTCTATTCTTCATGCCTCTTACACTAGCTTTTGTGTCAGACCCCTaGGGGCCAGCACTTCCTCCA +
Preference number: 3 (lower is better)
Translates to: LVHPFPFACLFFMPLTLAFVSDP*GPALPP
Trigger: TGGAGGAAGTGCTGGCCCCAAGGGGTCTGACACAAA...AGCTAGTGTAAGAGGCATGAAGAATAGACATGCAAAAGGGAACGGGTGCACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR-3UTR CAA 90 bp GCAAGAGACTTAGCCCCAGTAGTCTTCAGTTTCCTTATCTGTGGGGAAATGGGGAGATTCAGTGATCTGTaGGGGGTTGGGTGCTTCCCT +
Preference number: 3 (lower is better)
Translates to: ARDLAPVVFSFLICGEMGRFSDL*GVGCFP
Trigger: AGGGAAGCACCCAACCCCCAACAGATCACTGAATCT...CCCCATTTCCCCACAGATAAGGAAACTGAAGACTACTGGGGCTAAGTCTCTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000520108.1
3UTR GCA 72 bp AGGTATGTGTACCTGCCCCTTATTGGGCAATCCTCATaGAGGATTCCTCCAAATACCCACCAGCTGGCTAGT +
Preference number: 3 (lower is better)
Translates to: RYVYLPLIGQSS*RIPPNTHQLAS
Trigger: ACTAGCCAGCTGGTGGGTATTTGGAGGAATCCTGCATGAGGATTGCCCAATAAGGGGCAGGTACACATACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR-3UTR CAA 90 bp ACCAACTCGCTGTGCCTGGAAGGGATGTTAACCCCGATTCAGCCATTACTGCAATGGCCTCTGTTGAGTTaGTACAGATTTCTGCAGCTC +
Preference number: 3 (lower is better)
Translates to: TNSLCLEGMLTPIQPLLQWPLLS*YRFLQL
Trigger: GAGCTGCAGAAATCTGTACAAACTCAACAGAGGCCA...TTGCAGTAATGGCTGAATCGGGGTTAACATCCCTTCCAGGCACAGCGAGTTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR CCA 72 bp CTGGGAAGAAAGGCAGTTCTAATCAACTTGCAGGTGTaGCATTCTGCTTCAAGCCACCTGCATCCTAGAGAG +
Preference number: 3 (lower is better)
Translates to: LGRKAVLINLQV*HSASSHLHPRE
Trigger: CTCTCTAGGATGCAGGTGGCTTGAAGCAGAATGCCACACCTGCAAGTTGATTAGAACTGCCTTTCTTCCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR TCA 72 bp CTGGCTAGTGCTGGCATCATTATATGGCAGAGGCAGTaGAACAGTGTATTAGCTCCAGGACAGTGCTGCAAA +
Preference number: 3 (lower is better)
Translates to: LASAGIIIWQRQ*NSVLAPGQCCK
Trigger: TTTGCAGCACTGTCCTGGAGCTAATACACTGTTTCACTGCCTCTGCCATATAATGATGCCAGCACTAGCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR TCA 72 bp ACCCAAATCCCACCTAGAAGCCTGTGTCCTCTTGGTTaGGGGGTTGCTCTACACGTTGATATCTGCAGATAT +
Preference number: 3 (lower is better)
Translates to: TQIPPRSLCPLG*GVALHVDICRY
Trigger: ATATCTGCAGATATCAACGTGTAGAGCAACCCCTCAACCAAGAGGACACAGGCTTCTAGGTGGGATTTGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520108.1
3UTR GCA 72 bp TTTGGCTTACAGGCAAAAAGCAGAACCAACTCGCTGTaGCTGGAAGGGATGTTAACCCCGATTCAGCCATTA +
Preference number: 3 (lower is better)
Translates to: FGLQAKSRTNSL*LEGMLTPIQPL
Trigger: TAATGGCTGAATCGGGGTTAACATCCCTTCCAGGCACAGCGAGTTGGTTCTGCTTTTTGCCTGTAAGCCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR GCA 72 bp TCAACTTGCAGGTGTGGCATTCTGCTTCAAGCCACCTaGATCCTAGAGAGCAAGGATTCAAACTCAGATCTC +
Preference number: 3 (lower is better)
Translates to: STCRCGILLQAT*ILESKDSNSDL
Trigger: GAGATCTGAGTTTGAATCCTTGCTCTCTAGGATGCAGGTGGCTTGAAGCAGAATGCCACACCTGCAAGTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR CCA 72 bp TCATCACTTTGCCAGGTATGTGTACCTGCCCCTTATTaGGCAATCCTCATGCAGGATTCCTCCAAATACCCA +
Preference number: 3 (lower is better)
Translates to: SSLCQVCVPAPY*AILMQDSSKYP
Trigger: TGGGTATTTGGAGGAATCCTGCATGAGGATTGCCCAATAAGGGGCAGGTACACATACCTGGCAAAGTGATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR-3UTR CAA 90 bp TGTTATAGGGGAATAGTGGTTATAACTTTTCCCTGTAAGATGGCACATTGGATGCTGGGTTTCCCGTCTTaGTGTCAGACCCCTTGGGGC +
Preference number: 3 (lower is better)
Translates to: CYRGIVVITFPCKMAHWMLGFPS*CQTPWG
Trigger: GCCCCAAGGGGTCTGACACAAAGACGGGAAACCCAG...CATCCAATGTGCCATCTTACAGGGAAAAGTTATAACCACTATTCCCCTATAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR-3UTR CAA 90 bp TCACTTTGCCAGGTATGTGTACCTGCCCCTTATTGGGCAATCCTCATGCAGGATGCAGACCTGGCTTCTTaGGACAGCCTATTAAAATTC +
Preference number: 3 (lower is better)
Translates to: SLCQVCVPAPYWAILMQDADLAS*DSLLKF
Trigger: GAATTTTAATAGGCTGTCCAAAGAAGCCAGGTCTGC...ATCCTGCATGAGGATTGCCCAATAAGGGGCAGGTACACATACCTGGCAAAGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR-3UTR CAA 90 bp AAAGAGCAGCATCAGAGTGTTGGCTATAGTTTGGAACTTAGGAACAGGATCAGACCTTCCAGTCCAGGTTaGCCAGGAAGATGGTCAGAG +
Preference number: 3 (lower is better)
Translates to: KEQHQSVGYSLELRNRIRPSSPG*PGRWSE
Trigger: CTCTGACCATCTTCCTGGCAAACCTGGACTGGAAGG...TCTGATCCTGTTCCTAAGTTCCAAACTATAGCCAACACTCTGATGCTGCTCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR-3UTR CAA 90 bp TGTGGCATTCTGCTTCAAGCCACCTGCATCCTAGAGAGCAAGGATTCAAACTCAACTAGGTGGCCTCTGTaGAGTTTGTACAGATTTCTG +
Preference number: 3 (lower is better)
Translates to: CGILLQATCILESKDSNSTRWPL*SLYRFL
Trigger: CAGAAATCTGTACAAACTCAACAGAGGCCACCTAGT...TGAGTTTGAATCCTTGCTCTCTAGGATGCAGGTGGCTTGAAGCAGAATGCCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR-3UTR CAA 90 bp ACATCATCATCACTTTGCCAGGTATGTGTACCTGCCCCTTATTGGGCAATCCTCCCATATCCTGAGATATaGCCTGGGTTGATACACTTC +
Preference number: 3 (lower is better)
Translates to: TSSSLCQVCVPAPYWAILPYPEI*PGLIHF
Trigger: GAAGTGTATCAACCCAGGCAATATCTCAGGATATGG...GAGGATTGCCCAATAAGGGGCAGGTACACATACCTGGCAAAGTGATGATGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR-3UTR CAA 90 bp AGGCTATACTTGCCCACAGCAGACCTGGCTTCTTTGGACAGCCTATTAAAATTCTGCACCCGTTCCCTTTaGCATGTCTATTCTTCATGC +
Preference number: 3 (lower is better)
Translates to: RLYLPTADLASLDSLLKFCTRSL*HVYSSC
Trigger: GCATGAAGAATAGACATGCAAAAGGGAACGGGTGCA...GAATTTTAATAGGCTGTCCAAAGAAGCCAGGTCTGCTGTGGGCAAGTATAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR-3UTR CAA 90 bp GGTGGCATGACTCGTAGGCTCAAAGACTCACCACACTTATTGCATCTATTTCTGCCCTTGAAGATGTCATaGTTTAAGCTCAGGGTTGCC +
Preference number: 3 (lower is better)
Translates to: GGMTRRLKDSPHLLHLFLPLKMS*FKLRVA
Trigger: GGCAACCCTGAGCTTAAACAATGACATCTTCAAGGG...CAGAAATAGATGCAATAAGTGTGGTGAGTCTTTGAGCCTACGAGTCATGCCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR GCA 72 bp CTGGCTTATTTTACAAGACTAGGGTTAGGCTATACTTaGCCACAGCAGACCTGGCTTCTTTGGACAGCCTAT +
Preference number: 3 (lower is better)
Translates to: LAYFTRLGLGYT*PQQTWLLWTAY
Trigger: ATAGGCTGTCCAAAGAAGCCAGGTCTGCTGTGGGCAAGTATAGCCTAACCCTAGTCTTGTAAAATAAGCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR GCA 72 bp ATTCACATCATCATCACTTTGCCAGGTATGTGTACCTaGCCCTTATTGGGCAATCCTCATGCAGGATTCCTC +
Preference number: 3 (lower is better)
Translates to: IHIIITLPGMCT*PLLGNPHAGFL
Trigger: GAGGAATCCTGCATGAGGATTGCCCAATAAGGGGCAGGTACACATACCTGGCAAAGTGATGATGATGTGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR CCA 72 bp TGGGACTCTGTAAAAATGAGAAAGTCCCAGGCAAACTaGGACGGTTGGTCCTACAAGAAAAAGAGCAGCATC +
Preference number: 3 (lower is better)
Translates to: WDSVKMRKSQAN*DGWSYKKKSSI
Trigger: GATGCTGCTCTTTTTCTTGTAGGACCAACCGTCCCAGTTTGCCTGGGACTTTCTCATTTTTACAGAGTCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR-3UTR CAA 90 bp GGTGGCATGACTCGTAGGCTCAAAGACTCACCACACTTATTGCATCTATTTCTGACTAGGTGGCCTCTGTaGAGTTTGTACAGATTTCTG +
Preference number: 3 (lower is better)
Translates to: GGMTRRLKDSPHLLHLFLTRWPL*SLYRFL
Trigger: CAGAAATCTGTACAAACTCAACAGAGGCCACCTAGT...CAGAAATAGATGCAATAAGTGTGGTGAGTCTTTGAGCCTACGAGTCATGCCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR-3UTR CAA 90 bp CAATTCACATCATCATCACTTTGCCAGGTATGTGTACCTGCCCCTTATTGGGCAGCAGACCTGGCTTCTTaGGACAGCCTATTAAAATTC +
Preference number: 3 (lower is better)
Translates to: QFTSSSLCQVCVPAPYWAADLAS*DSLLKF
Trigger: GAATTTTAATAGGCTGTCCAAAGAAGCCAGGTCTGC...TGCCCAATAAGGGGCAGGTACACATACCTGGCAAAGTGATGATGATGTGAATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR CCA 72 bp TTAAGCTCAGGGTTGCCCTATCATATGGGCCTATTCTaGGTGCAGATGTGCTTATATCTCCTGATTTACAGG +
Preference number: 3 (lower is better)
Translates to: LSSGLPYHMGLF*VQMCLYLLIYR
Trigger: CCTGTAAATCAGGAGATATAAGCACATCTGCACCCAGAATAGGCCCATATGATAGGGCAACCCTGAGCTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR-3UTR CAA 90 bp CTGGTGCACCCGTTCCCTTTTGCATGTCTATTCTTCATGCCTCTTACACTAGCTGAGATATTGCCTGGGTaGATACACTTCTTGAATCTT +
Preference number: 3 (lower is better)
Translates to: LVHPFPFACLFFMPLTLAEILPG*IHFLNL
Trigger: AAGATTCAAGAAGTGTATCAACCCAGGCAATATCTC...AGCTAGTGTAAGAGGCATGAAGAATAGACATGCAAAAGGGAACGGGTGCACCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR-3UTR CAA 90 bp GACTTAATACCTATGTCAAGCCTGGGAAGAAAGGCAGTTCTAATCAACTTGCAGTGTTTAAGCTCAGGGTaGCCCTATCATATGGGCCTA +
Preference number: 3 (lower is better)
Translates to: DLIPMSSLGRKAVLINLQCLSSG*PYHMGL
Trigger: TAGGCCCATATGATAGGGCAACCCTGAGCTTAAACA...CTGCAAGTTGATTAGAACTGCCTTTCTTCCCAGGCTTGACATAGGTATTAAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR CCA 72 bp TTGATACACTTCTTGAATCTTGGAAACTTACGGCACTaGGTTGTAGGCTACGCTTATCTAGAGGGTCAGAAG +
Preference number: 3 (lower is better)
Translates to: LIHFLNLGNLRH*VVGYAYLEGQK
Trigger: CTTCTGACCCTCTAGATAAGCGTAGCCTACAACCCAGTGCCGTAAGTTTCCAAGATTCAAGAAGTGTATCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR-3UTR CAA 90 bp TGTGGCATTCTGCTTCAAGCCACCTGCATCCTAGAGAGCAAGGATTCAAACTCACCATGGAAGTCAAGGTaGTTGAAGAAAAGAATAAGA +
Preference number: 3 (lower is better)
Translates to: CGILLQATCILESKDSNSPWKSR*LKKRIR
Trigger: TCTTATTCTTTTCTTCAACAACCTTGACTTCCATGG...TGAGTTTGAATCCTTGCTCTCTAGGATGCAGGTGGCTTGAAGCAGAATGCCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR-3UTR CAA 90 bp GGTGGCATGACTCGTAGGCTCAAAGACTCACCACACTTATTGCATCTATTTCTGGAGATATTGCCTGGGTaGATACACTTCTTGAATCTT +
Preference number: 3 (lower is better)
Translates to: GGMTRRLKDSPHLLHLFLEILPG*IHFLNL
Trigger: AAGATTCAAGAAGTGTATCAACCCAGGCAATATCTC...CAGAAATAGATGCAATAAGTGTGGTGAGTCTTTGAGCCTACGAGTCATGCCACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR-3UTR CAA 90 bp AAAGAGCAGCATCAGAGTGTTGGCTATAGTTTGGAACTTAGGAACAGGATCAGATGTTTTCTGGCATCTTaGCTGAGGAGGTTCTCAAGT +
Preference number: 3 (lower is better)
Translates to: KEQHQSVGYSLELRNRIRCFLAS*LRRFSS
Trigger: ACTTGAGAACCTCCTCAGCAAAGATGCCAGAAAACA...TCTGATCCTGTTCCTAAGTTCCAAACTATAGCCAACACTCTGATGCTGCTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR TCA 72 bp GAAGAAAAGAATAAGACTGGCACATTGTTTCCTCTATaGAGAAGAAGGGGTCAAGGGTTATGTGGACCAGTG +
Preference number: 3 (lower is better)
Translates to: EEKNKTGTLFPL*RRRGQGLCGPV
Trigger: CACTGGTCCACATAACCCTTGACCCCTTCTTCTTCATAGAGGAAACAATGTGCCAGTCTTATTCTTTTCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR TCA 72 bp AACCCCGATTCAGCCATTACTGCAATACACTTGAGATaGAGCCCTTATGTGCACAAGTCTCTTCTGAAACTT +
Preference number: 3 (lower is better)
Translates to: NPDSAITAIHLR*SPYVHKSLLKL
Trigger: AAGTTTCAGAAGAGACTTGTGCACATAAGGGCTTCATCTCAAGTGTATTGCAGTAATGGCTGAATCGGGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR CCA 72 bp ATAGTGGTTATAACTTTTCCCTGTAAGATGGCACATTaGATGGTCACAGTTGGCTTGATTTACAGAGGGGCA +
Preference number: 3 (lower is better)
Translates to: IVVITFPCKMAH*MVTVGLIYRGA
Trigger: TGCCCCTCTGTAAATCAAGCCAACTGTGACCATCCAATGTGCCATCTTACAGGGAAAAGTTATAACCACTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR CCA 72 bp AGACTTAGCCCCAGTAGTCTTCAGTTTCCTTATCTGTaGGGAAATGGGGAGACTAGACCAATAGTAGAATTT +
Preference number: 3 (lower is better)
Translates to: RLSPSSLQFPYL*GNGETRPIVEF
Trigger: AAATTCTACTATTGGTCTAGTCTCCCCATTTCCCCACAGATAAGGAAACTGAAGACTACTGGGGCTAAGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520108.1
3UTR-3UTR CAA 90 bp TGTTATAGGGGAATAGTGGTTATAACTTTTCCCTGTAAGATGGCACATTGGATGTGGCCTCTGTTGAGTTaGTACAGATTTCTGCAGCTC +
Preference number: 3 (lower is better)
Translates to: CYRGIVVITFPCKMAHWMWPLLS*YRFLQL
Trigger: GAGCTGCAGAAATCTGTACAAACTCAACAGAGGCCA...CATCCAATGTGCCATCTTACAGGGAAAAGTTATAACCACTATTCCCCTATAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR-3UTR CAA 90 bp TGTTATAGGGGAATAGTGGTTATAACTTTTCCCTGTAAGATGGCACATTGGATGTGCACCCGTTCCCTTTaGCATGTCTATTCTTCATGC +
Preference number: 3 (lower is better)
Translates to: CYRGIVVITFPCKMAHWMCTRSL*HVYSSC
Trigger: GCATGAAGAATAGACATGCAAAAGGGAACGGGTGCA...CATCCAATGTGCCATCTTACAGGGAAAAGTTATAACCACTATTCCCCTATAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR-3UTR CAA 90 bp TGTTATAGGGGAATAGTGGTTATAACTTTTCCCTGTAAGATGGCACATTGGATGTGTTTAAGCTCAGGGTaGCCCTATCATATGGGCCTA +
Preference number: 3 (lower is better)
Translates to: CYRGIVVITFPCKMAHWMCLSSG*PYHMGL
Trigger: TAGGCCCATATGATAGGGCAACCCTGAGCTTAAACA...CATCCAATGTGCCATCTTACAGGGAAAAGTTATAACCACTATTCCCCTATAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR-3UTR CAA 90 bp TATCTGTGGGGAAATGGGGAGACTAGACCAATAGTAGAATTTGGGAGAGGTAAAGGGTTGCTCTACACGTaGATATCTGCAGATATCAAT +
Preference number: 3 (lower is better)
Translates to: YLWGNGETRPIVEFGRGKGLLYT*ISADIN
Trigger: ATTGATATCTGCAGATATCAACGTGTAGAGCAACCC...TTTACCTCTCCCAAATTCTACTATTGGTCTAGTCTCCCCATTTCCCCACAGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520108.1
3UTR-3UTR CAA 90 bp TTGCTCCAGTTTCCTAGGATTTGGGACTCTGTAAAAATGAGAAAGTCCCAGGCAGACTCACCACACTTATaGCATCTATTTCTGTACTTT +
Preference number: 3 (lower is better)
Translates to: LLQFPRIWDSVKMRKSQADSPHL*HLFLYF
Trigger: AAAGTACAGAAATAGATGCAATAAGTGTGGTGAGTC...TGCCTGGGACTTTCTCATTTTTACAGAGTCCCAAATCCTAGGAAACTGGAGCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR-3UTR CAA 90 bp AAAGAGCAGCATCAGAGTGTTGGCTATAGTTTGGAACTTAGGAACAGGATCAGAGACTCACCACACTTATaGCATCTATTTCTGTACTTT +
Preference number: 3 (lower is better)
Translates to: KEQHQSVGYSLELRNRIRDSPHL*HLFLYF
Trigger: AAAGTACAGAAATAGATGCAATAAGTGTGGTGAGTC...TCTGATCCTGTTCCTAAGTTCCAAACTATAGCCAACACTCTGATGCTGCTCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR-3UTR CAA 90 bp TGTTATAGGGGAATAGTGGTTATAACTTTTCCCTGTAAGATGGCACATTGGATGAAATTGGGGGAAAAATaGAGGTACCTGAGATCCAAG +
Preference number: 3 (lower is better)
Translates to: CYRGIVVITFPCKMAHWMKLGEK*RYLRSK
Trigger: CTTGGATCTCAGGTACCTCAATTTTTCCCCCAATTT...CATCCAATGTGCCATCTTACAGGGAAAAGTTATAACCACTATTCCCCTATAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR TCA 90 bp GGGGGTTGGGTGCTTCCCTGGTGTACCCAAATCCCACCTAGAAGCCTGTGTCCTGGCCACAGGAGGCTGTaGGCTTTCACGGTGCCCCAT +
Preference number: 4 (lower is better)
Translates to: GGWVLPWCTQIPPRSLCPGHRRL*AFTVPH
Trigger: ATGGGGCACCGTGAAAGCTCACAGCCTCCTGTGGCC...AGGACACAGGCTTCTAGGTGGGATTTGGGTACACCAGGGAAGCACCCAACCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520108.1
CDS-3UTR GCA 90 bp GGGGTTGGGTGCTTCCCTGGTGTACCCAAATCCCACCTAGAAGCCTGTGTCCTCCGCCCTGGTCCCACATaGTGCTCCTGTAGCCACCGT +
Preference number: 4 (lower is better)
Translates to: GVGCFPGVPKSHLEACVLRPGPT*CSCSHR
Trigger: ACGGTGGCTACAGGAGCAGCATGTGGGACCAGGGCG...GAGGACACAGGCTTCTAGGTGGGATTTGGGTACACCAGGGAAGCACCCAACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520108.1
CDS-3UTR CCA 90 bp TGGGTGCTTCCCTGGTGTACCCAAATCCCACCTAGAAGCCTGTGTCCTCTTGGTGGTAGTGGCCCTGGATaGGCACCCGGGCACTCTGGC +
Preference number: 4 (lower is better)
Translates to: WVLPWCTQIPPRSLCPLGGSGPG*APGHSG
Trigger: GCCAGAGTGCCCGGGTGCCCATCCAGGGCCACTACC...ACCAAGAGGACACAGGCTTCTAGGTGGGATTTGGGTACACCAGGGAAGCACCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520108.1
CDS-3UTR CCA 90 bp GGGGTTGGGTGCTTCCCTGGTGTACCCAAATCCCACCTAGAAGCCTGTGTCCTCTCCAGGATGTCGCCCTaGTCCCACATGCTGCTCCTG +
Preference number: 4 (lower is better)
Translates to: GVGCFPGVPKSHLEACVLSRMSP*SHMLLL
Trigger: CAGGAGCAGCATGTGGGACCAGGGCGACATCCTGGA...GAGGACACAGGCTTCTAGGTGGGATTTGGGTACACCAGGGAAGCACCCAACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520108.1
CDS-3UTR CCA 90 bp GGGTCCTCTAGACTCCAAGATTCAGTGATCTGTTGGGGGTTGGGTGCTTCCCTGGGCCAGGTCTGTGGCTaGGGCCTCCAATGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: GSSRLQDSVICWGLGASLGQVCG*GLQCLL
Trigger: GAGGAGGCATTGGAGGCCCCAGCCACAGACCTGGCC...CAGGGAAGCACCCAACCCCCAACAGATCACTGAATCTTGGAGTCTAGAGGACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520108.1
CDS-3UTR CCA 90 bp CCAGGGTCCTCTAGACTCCAAGATTCAGTGATCTGTTGGGGGTTGGGTGCTTCCGCCTGGCCAGGTCTGTaGCTGGGGCCTCCAATGCCT +
Preference number: 4 (lower is better)
Translates to: PGSSRLQDSVICWGLGASAWPGL*LGPPMP
Trigger: AGGCATTGGAGGCCCCAGCCACAGACCTGGCCAGGC...GGAAGCACCCAACCCCCAACAGATCACTGAATCTTGGAGTCTAGAGGACCCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520108.1
CDS-3UTR GCA 90 bp GGGGGTTGGGTGCTTCCCTGGTGTACCCAAATCCCACCTAGAAGCCTGTGTCCTCCTCCTCCAAGGAAGTaGCTGACCCAGACTCCAGGA +
Preference number: 4 (lower is better)
Translates to: GGWVLPWCTQIPPRSLCPPPPRK*LTQTPG
Trigger: TCCTGGAGTCTGGGTCAGGCACTTCCTTGGAGGAGG...AGGACACAGGCTTCTAGGTGGGATTTGGGTACACCAGGGAAGCACCCAACCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520108.1
CDS-3UTR CCA 90 bp GGGGGTTGGGTGCTTCCCTGGTGTACCCAAATCCCACCTAGAAGCCTGTGTCCTGTCAGGTACGCAGGCTaGGTCTTCCAGCAGGTCCAT +
Preference number: 4 (lower is better)
Translates to: GGWVLPWCTQIPPRSLCPVRYAG*VFQQVH
Trigger: ATGGACCTGCTGGAAGACCCAGCCTGCGTACCTGAC...AGGACACAGGCTTCTAGGTGGGATTTGGGTACACCAGGGAAGCACCCAACCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520108.1
CDS-3UTR CCA 90 bp GGGTCCTCTAGACTCCAAGATTCAGTGATCTGTTGGGGGTTGGGTGCTTCCCTGGTCAGGACCCAGAGCTaGATCCCAGCCTCCCGCAGA +
Preference number: 4 (lower is better)
Translates to: GSSRLQDSVICWGLGASLVRTQS*IPASRR
Trigger: TCTGCGGGAGGCTGGGATCCAGCTCTGGGTCCTGAC...CAGGGAAGCACCCAACCCCCAACAGATCACTGAATCTTGGAGTCTAGAGGACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520108.1
CDS-3UTR GCA 90 bp GGGGTTGGGTGCTTCCCTGGTGTACCCAAATCCCACCTAGAAGCCTGTGTCCTCCTGTTGGGGGTTGGGTaGTTCCCTGGTGTACCCAAA +
Preference number: 4 (lower is better)
Translates to: GVGCFPGVPKSHLEACVLLLGVG*FPGVPK
Trigger: TTTGGGTACACCAGGGAAGCACCCAACCCCCAACAG...GAGGACACAGGCTTCTAGGTGGGATTTGGGTACACCAGGGAAGCACCCAACCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520108.1
CDS-3UTR CCA 90 bp GTTGGGTGCTTCCCTGGTGTACCCAAATCCCACCTAGAAGCCTGTGTCCTCTTGAACAGAACTCAGGCCTaGCCAGGTCTGTGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: VGCFPGVPKSHLEACVLLNRTQA*PGLWLG
Trigger: CCCCAGCCACAGACCTGGCCAGGCCTGAGTTCTGTT...CAAGAGGACACAGGCTTCTAGGTGGGATTTGGGTACACCAGGGAAGCACCCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520108.1
CDS-3UTR CCA 90 bp GCAAGAGACTTAGCCCCAGTAGTCTTCAGTTTCCTTATCTGTGGGGAAATGGGGGTGAGGCAGGTGCCCTaGGGCAGGCGCACAGTCACC +
Preference number: 4 (lower is better)
Translates to: ARDLAPVVFSFLICGEMGVRQVP*GRRTVT
Trigger: GGTGACTGTGCGCCTGCCCCAGGGCACCTGCCTCAC...CCCCATTTCCCCACAGATAAGGAAACTGAAGACTACTGGGGCTAAGTCTCTTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000520108.1
CDS-3UTR CCA 90 bp GCTGTGCCTGGAAGGGATGTTAACCCCGATTCAGCCATTACTGCAATACACTTGGTGAGGCAGGTGCCCTaGGGCAGGCGCACAGTCACC +
Preference number: 4 (lower is better)
Translates to: AVPGRDVNPDSAITAIHLVRQVP*GRRTVT
Trigger: GGTGACTGTGCGCCTGCCCCAGGGCACCTGCCTCAC...CAAGTGTATTGCAGTAATGGCTGAATCGGGGTTAACATCCCTTCCAGGCACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp GGGGTTGGGTGCTTCCCTGGTGTACCCAAATCCCACCTAGAAGCCTGTGTCCTCGGTTGGGTGCTTCCCTaGTGTACCCAAATCCCACCT +
Preference number: 4 (lower is better)
Translates to: GVGCFPGVPKSHLEACVLGWVLP*CTQIPP
Trigger: AGGTGGGATTTGGGTACACCAGGGAAGCACCCAACC...GAGGACACAGGCTTCTAGGTGGGATTTGGGTACACCAGGGAAGCACCCAACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520108.1
3UTR CAA 72 bp AGGCCGACTGGGTTTCCCGTCTTTGTGTCAGACCCCTaGGGGCCAGCACTTCCTCCATGGAAGTCAAGGTTG +
Preference number: 4 (lower is better)
Translates to: RPTGFPVFVSDP*GPALPPWKSRL
Trigger: CAACCTTGACTTCCATGGAGGAAGTGCTGGCCCCAAGGGGTCTGACACAAAGACGGGAAACCCAGTCGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR TCA 90 bp CCAGGGTCCTCTAGACTCCAAGATTCAGTGATCTGTTGGGGGTTGGGTGCTTCCCTCCAAGGAAGTGCCTaGCCCAGACTCCAGGATGTC +
Preference number: 4 (lower is better)
Translates to: PGSSRLQDSVICWGLGASLQGSA*PRLQDV
Trigger: GACATCCTGGAGTCTGGGTCAGGCACTTCCTTGGAG...GGAAGCACCCAACCCCCAACAGATCACTGAATCTTGGAGTCTAGAGGACCCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520108.1
CDS-3UTR TCA 90 bp TGGGTGCTTCCCTGGTGTACCCAAATCCCACCTAGAAGCCTGTGTCCTCTTGGTTCCGGGACACTAGTGTaGAGCTGTAGGCATGGGCAG +
Preference number: 4 (lower is better)
Translates to: WVLPWCTQIPPRSLCPLGSGTLV*SCRHGQ
Trigger: CTGCCCATGCCTACAGCTTCACACTAGTGTCCCGGA...ACCAAGAGGACACAGGCTTCTAGGTGGGATTTGGGTACACCAGGGAAGCACCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520108.1
CDS-3UTR TCA 90 bp GGGGTTGGGTGCTTCCCTGGTGTACCCAAATCCCACCTAGAAGCCTGTGTCCTCGGATATTGGGCTGGATaGCTTCCAGGGTCCTCTAGA +
Preference number: 4 (lower is better)
Translates to: GVGCFPGVPKSHLEACVLGYWAG*LPGSSR
Trigger: TCTAGAGGACCCTGGAAGTCATCCAGCCCAATATCC...GAGGACACAGGCTTCTAGGTGGGATTTGGGTACACCAGGGAAGCACCCAACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520108.1
CDS-3UTR GCA 90 bp GGGTCCTCTAGACTCCAAGATTCAGTGATCTGTTGGGGGTTGGGTGCTTCCCTGCTGGCCCAAGTCCTCTaGGATGTTGAGGGCTCGACA +
Preference number: 4 (lower is better)
Translates to: GSSRLQDSVICWGLGASLLAQVL*DVEGST
Trigger: TGTCGAGCCCTCAACATCGCAGAGGACTTGGGCCAG...CAGGGAAGCACCCAACCCCCAACAGATCACTGAATCTTGGAGTCTAGAGGACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520108.1
CDS-3UTR GCA 90 bp AGATTCAGTGATCTGTTGGGGGTTGGGTGCTTCCCTGGTGTACCCAAATCCCACAGGCGCACAGTCACCTaGTCAGGTGTCCGGGACACT +
Preference number: 4 (lower is better)
Translates to: RFSDLLGVGCFPGVPKSHRRTVT*SGVRDT
Trigger: AGTGTCCCGGACACCTGAGCAGGTGACTGTGCGCCT...GTGGGATTTGGGTACACCAGGGAAGCACCCAACCCCCAACAGATCACTGAATCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520108.1
CDS-3UTR CCA 90 bp GGGGGTTGGGTGCTTCCCTGGTGTACCCAAATCCCACCTAGAAGCCTGTGTCCTGGAAGAAATCAGCAATaGAGGAGGTGGTGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: GGWVLPWCTQIPPRSLCPGRNQQ*RRWWRG
Trigger: CCCTCTCCACCACCTCCTCCATTGCTGATTTCTTCC...AGGACACAGGCTTCTAGGTGGGATTTGGGTACACCAGGGAAGCACCCAACCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520108.1
CDS-3UTR CCA 90 bp AGATTCAGTGATCTGTTGGGGGTTGGGTGCTTCCCTGGTGTACCCAAATCCCACCATCCGAGTCTGTGGTaGCCACGTTGGCCCCTAAGC +
Preference number: 4 (lower is better)
Translates to: RFSDLLGVGCFPGVPKSHHPSLW*PRWPLS
Trigger: GCTTAGGGGCCAACGTGGCCACCACAGACTCGGATG...GTGGGATTTGGGTACACCAGGGAAGCACCCAACCCCCAACAGATCACTGAATCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520108.1
CDS-3UTR CCA 90 bp CTGGTGCACCCGTTCCCTTTTGCATGTCTATTCTTCATGCCTCTTACACTAGCTGTGAGGCAGGTGCCCTaGGGCAGGCGCACAGTCACC +
Preference number: 4 (lower is better)
Translates to: LVHPFPFACLFFMPLTLAVRQVP*GRRTVT
Trigger: GGTGACTGTGCGCCTGCCCCAGGGCACCTGCCTCAC...AGCTAGTGTAAGAGGCATGAAGAATAGACATGCAAAAGGGAACGGGTGCACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp GGGGTTGGGTGCTTCCCTGGTGTACCCAAATCCCACCTAGAAGCCTGTGTCCTCCCGAGTCAGCACCCTTaGTGTAGACAACAATCTCGC +
Preference number: 4 (lower is better)
Translates to: GVGCFPGVPKSHLEACVLPSQHP*CRQQSR
Trigger: GCGAGATTGTTGTCTACACCAAGGGTGCTGACTCGG...GAGGACACAGGCTTCTAGGTGGGATTTGGGTACACCAGGGAAGCACCCAACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520108.1
CDS-3UTR CCA 90 bp GGGGGTTGGGTGCTTCCCTGGTGTACCCAAATCCCACCTAGAAGCCTGTGTCCTGATTCAGTGATCTGTTaGGGGTTGGGTGCTTCCCTG +
Preference number: 4 (lower is better)
Translates to: GGWVLPWCTQIPPRSLCPDSVIC*GLGASL
Trigger: CAGGGAAGCACCCAACCCCCAACAGATCACTGAATC...AGGACACAGGCTTCTAGGTGGGATTTGGGTACACCAGGGAAGCACCCAACCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520108.1
CDS-3UTR TCA 90 bp ACCAACTCGCTGTGCCTGGAAGGGATGTTAACCCCGATTCAGCCATTACTGCAAGGGGGAAGCCATCTCTaGCTCTCCACTGCCACCGAT +
Preference number: 4 (lower is better)
Translates to: TNSLCLEGMLTPIQPLLQGGSHL*LSTATD
Trigger: ATCGGTGGCAGTGGAGAGTCAGAGATGGCTTCCCCC...TTGCAGTAATGGCTGAATCGGGGTTAACATCCCTTCCAGGCACAGCGAGTTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327245.10
CDS-3UTR TCA 90 bp AGATTCAGTGATCTGTTGGGGGTTGGGTGCTTCCCTGGTGTACCCAAATCCCACGGCAGGTCTGCTGTCTaGCAAGGTCTCCAACCACAG +
Preference number: 4 (lower is better)
Translates to: RFSDLLGVGCFPGVPKSHGRSAV*QGLQPQ
Trigger: CTGTGGTTGGAGACCTTGTCAGACAGCAGACCTGCC...GTGGGATTTGGGTACACCAGGGAAGCACCCAACCCCCAACAGATCACTGAATCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520108.1
CDS-3UTR GCA 90 bp GGGTCCTCTAGACTCCAAGATTCAGTGATCTGTTGGGGGTTGGGTGCTTCCCTGTGTGAGCTTTCACGGTaGCCCATAGACCTTTGCCGG +
Preference number: 4 (lower is better)
Translates to: GSSRLQDSVICWGLGASLCELSR*PIDLCR
Trigger: CCGGCAAAGGTCTATGGGGCACCGTGAAAGCTCACA...CAGGGAAGCACCCAACCCCCAACAGATCACTGAATCTTGGAGTCTAGAGGACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520108.1
CDS-3UTR GCA 90 bp TTACAGGCAAAAAGCAGAACCAACTCGCTGTGCCTGGAAGGGATGTTAACCCCGAGGCGCACAGTCACCTaGTCAGGTGTCCGGGACACT +
Preference number: 4 (lower is better)
Translates to: LQAKSRTNSLCLEGMLTPRRTVT*SGVRDT
Trigger: AGTGTCCCGGACACCTGAGCAGGTGACTGTGCGCCT...CGGGGTTAACATCCCTTCCAGGCACAGCGAGTTGGTTCTGCTTTTTGCCTGTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR GCA 90 bp GGGGTTGGGTGCTTCCCTGGTGTACCCAAATCCCACCTAGAAGCCTGTGTCCTCCAACCTTCTTGGCAATaGATAGTGTGCGCAGGCCAT +
Preference number: 4 (lower is better)
Translates to: GVGCFPGVPKSHLEACVLQPSWQ*IVCAGH
Trigger: ATGGCCTGCGCACACTATGCATTGCCAAGAAGGTTG...GAGGACACAGGCTTCTAGGTGGGATTTGGGTACACCAGGGAAGCACCCAACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520108.1
CDS-3UTR GCA 90 bp TGGGTGCTTCCCTGGTGTACCCAAATCCCACCTAGAAGCCTGTGTCCTCTTGGTTCTGGAACTCCTTCCTaGAGCCGGTCTTCGATCCCA +
Preference number: 4 (lower is better)
Translates to: WVLPWCTQIPPRSLCPLGSGTPS*SRSSIP
Trigger: TGGGATCGAAGACCGGCTGCAGGAAGGAGTTCCAGA...ACCAAGAGGACACAGGCTTCTAGGTGGGATTTGGGTACACCAGGGAAGCACCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520108.1
CDS-3UTR CCA 90 bp GTTGGGTGCTTCCCTGGTGTACCCAAATCCCACCTAGAAGCCTGTGTCCTCTTGAGCCACCGTCATCAGTaGAGTCACCTCCACTGCACA +
Preference number: 4 (lower is better)
Translates to: VGCFPGVPKSHLEACVLLSHRHQ*SHLHCT
Trigger: TGTGCAGTGGAGGTGACTCCACTGATGACGGTGGCT...CAAGAGGACACAGGCTTCTAGGTGGGATTTGGGTACACCAGGGAAGCACCCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520108.1
CDS-3UTR CCA 90 bp TCTTTTCCCTGTGAAGTGACACTTGCTCTGACTCTAACTGATGCAGGCCAGTGTGGCCAGGTCTGTGGCTaGGGCCTCCAATGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: SFPCEVTLALTLTDAGQCGQVCG*GLQCLL
Trigger: GAGGAGGCATTGGAGGCCCCAGCCACAGACCTGGCC...ACACTGGCCTGCATCAGTTAGAGTCAGAGCAAGTGTCACTTCACAGGGAAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp TCTTTTCCCTGTGAAGTGACACTTGCTCTGACTCTAACTGATGCAGGCCAGTGTGCCTGGCCAGGTCTGTaGCTGGGGCCTCCAATGCCT +
Preference number: 4 (lower is better)
Translates to: SFPCEVTLALTLTDAGQCAWPGL*LGPPMP
Trigger: AGGCATTGGAGGCCCCAGCCACAGACCTGGCCAGGC...ACACTGGCCTGCATCAGTTAGAGTCAGAGCAAGTGTCACTTCACAGGGAAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR TCA 90 bp TGGGTGCTTCCCTGGTGTACCCAAATCCCACCTAGAAGCCTGTGTCCTCTTGGTAATACTCGCTGCCCATaGTGGTGCAACGTCGGAACA +
Preference number: 4 (lower is better)
Translates to: WVLPWCTQIPPRSLCPLGNTRCP*WCNVGT
Trigger: TGTTCCGACGTTGCACCATCATGGGCAGCGAGTATT...ACCAAGAGGACACAGGCTTCTAGGTGGGATTTGGGTACACCAGGGAAGCACCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520108.1
CDS-3UTR TCA 90 bp TGTGGCATTCTGCTTCAAGCCACCTGCATCCTAGAGAGCAAGGATTCAAACTCAGGCCACAGGAGGCTGTaGGCTTTCACGGTGCCCCAT +
Preference number: 4 (lower is better)
Translates to: CGILLQATCILESKDSNSGHRRL*AFTVPH
Trigger: ATGGGGCACCGTGAAAGCTCACAGCCTCCTGTGGCC...TGAGTTTGAATCCTTGCTCTCTAGGATGCAGGTGGCTTGAAGCAGAATGCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR TCA 90 bp GTTGGGTGCTTCCCTGGTGTACCCAAATCCCACCTAGAAGCCTGTGTCCTCTTGCTGTGTCCTCTTGGTTaGGGGGTTGCTCTACACGTT +
Preference number: 4 (lower is better)
Translates to: VGCFPGVPKSHLEACVLLLCPLG*GVALHV
Trigger: AACGTGTAGAGCAACCCCTCAACCAAGAGGACACAG...CAAGAGGACACAGGCTTCTAGGTGGGATTTGGGTACACCAGGGAAGCACCCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520108.1
CDS-3UTR GCA 90 bp TTACAGGCAAAAAGCAGAACCAACTCGCTGTGCCTGGAAGGGATGTTAACCCCGCCTCCTCCAAGGAAGTaGCTGACCCAGACTCCAGGA +
Preference number: 4 (lower is better)
Translates to: LQAKSRTNSLCLEGMLTPPPPRK*LTQTPG
Trigger: TCCTGGAGTCTGGGTCAGGCACTTCCTTGGAGGAGG...CGGGGTTAACATCCCTTCCAGGCACAGCGAGTTGGTTCTGCTTTTTGCCTGTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR GCA 90 bp GTTGGGTGCTTCCCTGGTGTACCCAAATCCCACCTAGAAGCCTGTGTCCTCTTGTTGACCGCTGTCTCCTaGTTATCTCCAGTCAGGACC +
Preference number: 4 (lower is better)
Translates to: VGCFPGVPKSHLEACVLLLTAVS*LSPVRT
Trigger: GGTCCTGACTGGAGATAAGCAGGAGACAGCGGTCAA...CAAGAGGACACAGGCTTCTAGGTGGGATTTGGGTACACCAGGGAAGCACCCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520108.1
CDS-3UTR GCA 90 bp ACATCATCATCACTTTGCCAGGTATGTGTACCTGCCCCTTATTGGGCAATCCTCGGGATCGGCGATGGCTaGTCCTCTTTGAGCACCGGC +
Preference number: 4 (lower is better)
Translates to: TSSSLCQVCVPAPYWAILGIGDG*SSLSTG
Trigger: GCCGGTGCTCAAAGAGGAGCAGCCATCGCCGATCCC...GAGGATTGCCCAATAAGGGGCAGGTACACATACCTGGCAAAGTGATGATGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp TTTTACAAGACTAGGGTTAGGCTATACTTGCCCACAGCAGACCTGGCTTCTTTGGGCCAGGTCTGTGGCTaGGGCCTCCAATGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: FYKTRVRLYLPTADLASLGQVCG*GLQCLL
Trigger: GAGGAGGCATTGGAGGCCCCAGCCACAGACCTGGCC...CAAAGAAGCCAGGTCTGCTGTGGGCAAGTATAGCCTAACCCTAGTCTTGTAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp GGTGGCATGACTCGTAGGCTCAAAGACTCACCACACTTATTGCATCTATTTCTGGCCTGGCCAGGTCTGTaGCTGGGGCCTCCAATGCCT +
Preference number: 4 (lower is better)
Translates to: GGMTRRLKDSPHLLHLFLAWPGL*LGPPMP
Trigger: AGGCATTGGAGGCCCCAGCCACAGACCTGGCCAGGC...CAGAAATAGATGCAATAAGTGTGGTGAGTCTTTGAGCCTACGAGTCATGCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp TGGGTGCTTCCCTGGTGTACCCAAATCCCACCTAGAAGCCTGTGTCCTCTTGGTAATCTCGCCAGTCAGTaGGTGCCTCACAACCACAGA +
Preference number: 4 (lower is better)
Translates to: WVLPWCTQIPPRSLCPLGNLASQ*VPHNHR
Trigger: TCTGTGGTTGTGAGGCACCCACTGACTGGCGAGATT...ACCAAGAGGACACAGGCTTCTAGGTGGGATTTGGGTACACCAGGGAAGCACCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520108.1
CDS-3UTR CCA 90 bp TTACAGGCAAAAAGCAGAACCAACTCGCTGTGCCTGGAAGGGATGTTAACCCCGGTCAGGTACGCAGGCTaGGTCTTCCAGCAGGTCCAT +
Preference number: 4 (lower is better)
Translates to: LQAKSRTNSLCLEGMLTPVRYAG*VFQQVH
Trigger: ATGGACCTGCTGGAAGACCCAGCCTGCGTACCTGAC...CGGGGTTAACATCCCTTCCAGGCACAGCGAGTTGGTTCTGCTTTTTGCCTGTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR TCA 90 bp GGGGGTTGGGTGCTTCCCTGGTGTACCCAAATCCCACCTAGAAGCCTGTGTCCTTTGAGGGCTCGACATTaGATGGATAAATCGGTCTCT +
Preference number: 4 (lower is better)
Translates to: GGWVLPWCTQIPPRSLCPLRARH*MDKSVS
Trigger: AGAGACCGATTTATCCATTCAATGTCGAGCCCTCAA...AGGACACAGGCTTCTAGGTGGGATTTGGGTACACCAGGGAAGCACCCAACCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520108.1
CDS-3UTR TCA 90 bp ACCAACTCGCTGTGCCTGGAAGGGATGTTAACCCCGATTCAGCCATTACTGCAACTCCTCCTCAGAGGCTaGGCACCTTTTTGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: TNSLCLEGMLTPIQPLLQLLLRG*APFWLL
Trigger: GAGAAGCCAAAAAGGTGCTCAGCCTCTGAGGAGGAG...TTGCAGTAATGGCTGAATCGGGGTTAACATCCCTTCCAGGCACAGCGAGTTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR TCA 90 bp GCAAGAGACTTAGCCCCAGTAGTCTTCAGTTTCCTTATCTGTGGGGAAATGGGGCCCCAGAGCCTTGCTTaGGGGTTTGATGGTGACCCT +
Preference number: 4 (lower is better)
Translates to: ARDLAPVVFSFLICGEMGPQSLA*GFDGDP
Trigger: AGGGTCACCATCAAACCCTCAAGCAAGGCTCTGGGG...CCCCATTTCCCCACAGATAAGGAAACTGAAGACTACTGGGGCTAAGTCTCTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000520108.1
CDS-3UTR TCA 90 bp TCACTTTGCCAGGTATGTGTACCTGCCCCTTATTGGGCAATCCTCATGCAGGATCTCCAAGGAAGTGCCTaGCCCAGACTCCAGGATGTC +
Preference number: 4 (lower is better)
Translates to: SLCQVCVPAPYWAILMQDLQGSA*PRLQDV
Trigger: GACATCCTGGAGTCTGGGTCAGGCACTTCCTTGGAG...ATCCTGCATGAGGATTGCCCAATAAGGGGCAGGTACACATACCTGGCAAAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR TCA 90 bp TGGGTGCTTCCCTGGTGTACCCAAATCCCACCTAGAAGCCTGTGTCCTCTTGGTGCTGTGCAGTTTCCATaGGAAGCTCATCTCGGTTGT +
Preference number: 4 (lower is better)
Translates to: WVLPWCTQIPPRSLCPLGAVQFP*EAHLGC
Trigger: ACAACCGAGATGAGCTTCTCATGGAAACTGCACAGC...ACCAAGAGGACACAGGCTTCTAGGTGGGATTTGGGTACACCAGGGAAGCACCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520108.1
CDS-3UTR TCA 90 bp GTTGGGTGCTTCCCTGGTGTACCCAAATCCCACCTAGAAGCCTGTGTCCTCTTGAGGAATGGGCAATGTTaGCCGCTGTCTCCTGCTTAT +
Preference number: 4 (lower is better)
Translates to: VGCFPGVPKSHLEACVLLRNGQC*PLSPAY
Trigger: ATAAGCAGGAGACAGCGGTCAACATTGCCCATTCCT...CAAGAGGACACAGGCTTCTAGGTGGGATTTGGGTACACCAGGGAAGCACCCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520108.1
CDS-3UTR GCA 90 bp TGTGGCATTCTGCTTCAAGCCACCTGCATCCTAGAGAGCAAGGATTCAAACTCAGCCGCTCAATCTTGCTaGGTTTGTACCGGGGGCCAC +
Preference number: 4 (lower is better)
Translates to: CGILLQATCILESKDSNSAAQSC*VCTGGH
Trigger: GTGGCCCCCGGTACAAACGCAGCAAGATTGAGCGGC...TGAGTTTGAATCCTTGCTCTCTAGGATGCAGGTGGCTTGAAGCAGAATGCCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR GCA 90 bp CTGGTGCACCCGTTCCCTTTTGCATGTCTATTCTTCATGCCTCTTACACTAGCTTGCGCCGCTCAATCTTaGTGCGTTTGTACCGGGGGC +
Preference number: 4 (lower is better)
Translates to: LVHPFPFACLFFMPLTLACAAQS*CVCTGG
Trigger: GCCCCCGGTACAAACGCAGCAAGATTGAGCGGCGCA...AGCTAGTGTAAGAGGCATGAAGAATAGACATGCAAAAGGGAACGGGTGCACCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR GCA 90 bp GCTGTGCCTGGAAGGGATGTTAACCCCGATTCAGCCATTACTGCAATACACTTGTTGATGGTGACCCTCTaGCTGGGCTCGGTGGTTGTG +
Preference number: 4 (lower is better)
Translates to: AVPGRDVNPDSAITAIHLLMVTL*LGSVVV
Trigger: CACAACCACCGAGCCCAGGCAGAGGGTCACCATCAA...CAAGTGTATTGCAGTAATGGCTGAATCGGGGTTAACATCCCTTCCAGGCACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR GCA 90 bp GGGTCCTCTAGACTCCAAGATTCAGTGATCTGTTGGGGGTTGGGTGCTTCCCTGTGGAGTCACCTCCACTaGACACAGATGCATCATCTC +
Preference number: 4 (lower is better)
Translates to: GSSRLQDSVICWGLGASLWSHLH*TQMHHL
Trigger: GAGATGATGCATCTGTGTGCAGTGGAGGTGACTCCA...CAGGGAAGCACCCAACCCCCAACAGATCACTGAATCTTGGAGTCTAGAGGACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520108.1
CDS-3UTR GCA 90 bp GCAAGAGACTTAGCCCCAGTAGTCTTCAGTTTCCTTATCTGTGGGGAAATGGGGCCTGGTCCCACATGCTaGTCCTGTAGCCACCGTCAT +
Preference number: 4 (lower is better)
Translates to: ARDLAPVVFSFLICGEMGPGPTC*SCSHRH
Trigger: ATGACGGTGGCTACAGGAGCAGCATGTGGGACCAGG...CCCCATTTCCCCACAGATAAGGAAACTGAAGACTACTGGGGCTAAGTCTCTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000520108.1
CDS-3UTR CCA 90 bp TTACAGGCAAAAAGCAGAACCAACTCGCTGTGCCTGGAAGGGATGTTAACCCCGCTGTCTCCCTTTCTCTaGAGAGAGCAGCGGTGTGGT +
Preference number: 4 (lower is better)
Translates to: LQAKSRTNSLCLEGMLTPLSPFL*REQRCG
Trigger: ACCACACCGCTGCTCTCTCCAGAGAAAGGGAGACAG...CGGGGTTAACATCCCTTCCAGGCACAGCGAGTTGGTTCTGCTTTTTGCCTGTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327245.10
CDS-3UTR CCA 90 bp GACTTAATACCTATGTCAAGCCTGGGAAGAAAGGCAGTTCTAATCAACTTGCAGGGTAGTGGCCCTGGATaGGCACCCGGGCACTCTGGC +
Preference number: 4 (lower is better)
Translates to: DLIPMSSLGRKAVLINLQGSGPG*APGHSG
Trigger: GCCAGAGTGCCCGGGTGCCCATCCAGGGCCACTACC...CTGCAAGTTGATTAGAACTGCCTTTCTTCCCAGGCTTGACATAGGTATTAAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp TGTGGCATTCTGCTTCAAGCCACCTGCATCCTAGAGAGCAAGGATTCAAACTCACATCCGAGTCTGTGGTaGCCACGTTGGCCCCTAAGC +
Preference number: 4 (lower is better)
Translates to: CGILLQATCILESKDSNSHPSLW*PRWPLS
Trigger: GCTTAGGGGCCAACGTGGCCACCACAGACTCGGATG...TGAGTTTGAATCCTTGCTCTCTAGGATGCAGGTGGCTTGAAGCAGAATGCCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp GCTGTGCCTGGAAGGGATGTTAACCCCGATTCAGCCATTACTGCAATACACTTGTCTCATCCGAGTCTGTaGTGGCCACGTTGGCCCCTA +
Preference number: 4 (lower is better)
Translates to: AVPGRDVNPDSAITAIHLSHPSL*WPRWPL
Trigger: TAGGGGCCAACGTGGCCACCACAGACTCGGATGAGA...CAAGTGTATTGCAGTAATGGCTGAATCGGGGTTAACATCCCTTCCAGGCACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp TGTGGCATTCTGCTTCAAGCCACCTGCATCCTAGAGAGCAAGGATTCAAACTCAAACAGAACTCAGGCCTaGCCAGGTCTGTGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: CGILLQATCILESKDSNSNRTQA*PGLWLG
Trigger: CCCCAGCCACAGACCTGGCCAGGCCTGAGTTCTGTT...TGAGTTTGAATCCTTGCTCTCTAGGATGCAGGTGGCTTGAAGCAGAATGCCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp TTTCTTTGGCTTACAGGCAAAAAGCAGAACCAACTCGCTGTGCCTGGAAGGGATAACAGAACTCAGGCCTaGCCAGGTCTGTGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: FLWLTGKKQNQLAVPGRDNRTQA*PGLWLG
Trigger: CCCCAGCCACAGACCTGGCCAGGCCTGAGTTCTGTT...ATCCCTTCCAGGCACAGCGAGTTGGTTCTGCTTTTTGCCTGTAAGCCAAAGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp CTGGTGCACCCGTTCCCTTTTGCATGTCTATTCTTCATGCCTCTTACACTAGCTCCTCACGCCGGAAACTaGCCCATCTCCGGAAGTCCT +
Preference number: 4 (lower is better)
Translates to: LVHPFPFACLFFMPLTLAPHAGN*PISGSP
Trigger: AGGACTTCCGGAGATGGGCCAGTTTCCGGCGTGAGG...AGCTAGTGTAAGAGGCATGAAGAATAGACATGCAAAAGGGAACGGGTGCACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp ACCAACTCGCTGTGCCTGGAAGGGATGTTAACCCCGATTCAGCCATTACTGCAACAGCCTCCCGCAGAGTaGCAATCGTATCTGGAACTC +
Preference number: 4 (lower is better)
Translates to: TNSLCLEGMLTPIQPLLQQPPAE*QSYLEL
Trigger: GAGTTCCAGATACGATTGCCACTCTGCGGGAGGCTG...TTGCAGTAATGGCTGAATCGGGGTTAACATCCCTTCCAGGCACAGCGAGTTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp TCACTTTGCCAGGTATGTGTACCTGCCCCTTATTGGGCAATCCTCATGCAGGATAGTACACCACCATCCTaGCCAGGCGCGAGTAACACC +
Preference number: 4 (lower is better)
Translates to: SLCQVCVPAPYWAILMQDSTPPS*PGASNT
Trigger: GGTGTTACTCGCGCCTGGCCAGGATGGTGGTGTACT...ATCCTGCATGAGGATTGCCCAATAAGGGGCAGGTACACATACCTGGCAAAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR TCA 90 bp TTACAGGCAAAAAGCAGAACCAACTCGCTGTGCCTGGAAGGGATGTTAACCCCGAGTCCTCTGCGATGTTaGGGGCTCGACATTGAATGG +
Preference number: 4 (lower is better)
Translates to: LQAKSRTNSLCLEGMLTPSPLRC*GLDIEW
Trigger: CCATTCAATGTCGAGCCCTCAACATCGCAGAGGACT...CGGGGTTAACATCCCTTCCAGGCACAGCGAGTTGGTTCTGCTTTTTGCCTGTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR TCA 90 bp TCTTTTCCCTGTGAAGTGACACTTGCTCTGACTCTAACTGATGCAGGCCAGTGTGGCAGGTCTGCTGTCTaGCAAGGTCTCCAACCACAG +
Preference number: 4 (lower is better)
Translates to: SFPCEVTLALTLTDAGQCGRSAV*QGLQPQ
Trigger: CTGTGGTTGGAGACCTTGTCAGACAGCAGACCTGCC...ACACTGGCCTGCATCAGTTAGAGTCAGAGCAAGTGTCACTTCACAGGGAAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR TCA 90 bp ACATCATCATCACTTTGCCAGGTATGTGTACCTGCCCCTTATTGGGCAATCCTCCTCCAAGGAAGTGCCTaGCCCAGACTCCAGGATGTC +
Preference number: 4 (lower is better)
Translates to: TSSSLCQVCVPAPYWAILLQGSA*PRLQDV
Trigger: GACATCCTGGAGTCTGGGTCAGGCACTTCCTTGGAG...GAGGATTGCCCAATAAGGGGCAGGTACACATACCTGGCAAAGTGATGATGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR TCA 90 bp TTACAGGCAAAAAGCAGAACCAACTCGCTGTGCCTGGAAGGGATGTTAACCCCGCTGTCCTGTGATAGATaGCACTGGGTGGTGAGTTGG +
Preference number: 4 (lower is better)
Translates to: LQAKSRTNSLCLEGMLTPLSCDR*HWVVSW
Trigger: CCAACTCACCACCCAGTGTCATCTATCACAGGACAG...CGGGGTTAACATCCCTTCCAGGCACAGCGAGTTGGTTCTGCTTTTTGCCTGTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR TCA 90 bp TTTTACAAGACTAGGGTTAGGCTATACTTGCCCACAGCAGACCTGGCTTCTTTGTCCCCGGATGAGAGTTaGGCTGAGGAGTCCCCTGAG +
Preference number: 4 (lower is better)
Translates to: FYKTRVRLYLPTADLASLSPDES*AEESPE
Trigger: CTCAGGGGACTCCTCAGCTCAACTCTCATCCGGGGA...CAAAGAAGCCAGGTCTGCTGTGGGCAAGTATAGCCTAACCCTAGTCTTGTAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR TCA 90 bp GGGTCCTCTAGACTCCAAGATTCAGTGATCTGTTGGGGGTTGGGTGCTTCCCTGAGCCATGTGTGGGGATaGGATAAAGGATATTGGGCT +
Preference number: 4 (lower is better)
Translates to: GSSRLQDSVICWGLGASLSHVWG*DKGYWA
Trigger: AGCCCAATATCCTTTATCTCATCCCCACACATGGCT...CAGGGAAGCACCCAACCCCCAACAGATCACTGAATCTTGGAGTCTAGAGGACCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520108.1
CDS-3UTR GCA 90 bp AGGCTATACTTGCCCACAGCAGACCTGGCTTCTTTGGACAGCCTATTAAAATTCTGCGCCGCTCAATCTTaGTGCGTTTGTACCGGGGGC +
Preference number: 4 (lower is better)
Translates to: RLYLPTADLASLDSLLKFCAAQS*CVCTGG
Trigger: GCCCCCGGTACAAACGCAGCAAGATTGAGCGGCGCA...GAATTTTAATAGGCTGTCCAAAGAAGCCAGGTCTGCTGTGGGCAAGTATAGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR GCA 90 bp ACATCATCATCACTTTGCCAGGTATGTGTACCTGCCCCTTATTGGGCAATCCTCCTCCACTGCCACCGATaGCACGATGAGTCCACTGAG +
Preference number: 4 (lower is better)
Translates to: TSSSLCQVCVPAPYWAILLHCHR*HDESTE
Trigger: CTCAGTGGACTCATCGTGGCATCGGTGGCAGTGGAG...GAGGATTGCCCAATAAGGGGCAGGTACACATACCTGGCAAAGTGATGATGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327245.10
CDS-3UTR GCA 90 bp TTTCTTTGGCTTACAGGCAAAAAGCAGAACCAACTCGCTGTGCCTGGAAGGGATCCTGGTCCCACATGCTaGTCCTGTAGCCACCGTCAT +
Preference number: 4 (lower is better)
Translates to: FLWLTGKKQNQLAVPGRDPGPTC*SCSHRH
Trigger: ATGACGGTGGCTACAGGAGCAGCATGTGGGACCAGG...ATCCCTTCCAGGCACAGCGAGTTGGTTCTGCTTTTTGCCTGTAAGCCAAAGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR GCA 90 bp ACATCATCATCACTTTGCCAGGTATGTGTACCTGCCCCTTATTGGGCAATCCTCCCTGGTCCCACATGCTaGTCCTGTAGCCACCGTCAT +
Preference number: 4 (lower is better)
Translates to: TSSSLCQVCVPAPYWAILPGPTC*SCSHRH
Trigger: ATGACGGTGGCTACAGGAGCAGCATGTGGGACCAGG...GAGGATTGCCCAATAAGGGGCAGGTACACATACCTGGCAAAGTGATGATGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR GCA 90 bp TTGCTCCAGTTTCCTAGGATTTGGGACTCTGTAAAAATGAGAAAGTCCCAGGCACGCCCTGGTCCCACATaGTGCTCCTGTAGCCACCGT +
Preference number: 4 (lower is better)
Translates to: LLQFPRIWDSVKMRKSQARPGPT*CSCSHR
Trigger: ACGGTGGCTACAGGAGCAGCATGTGGGACCAGGGCG...TGCCTGGGACTTTCTCATTTTTACAGAGTCCCAAATCCTAGGAAACTGGAGCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR GCA 90 bp TTACAGGCAAAAAGCAGAACCAACTCGCTGTGCCTGGAAGGGATGTTAACCCCGTCGCCAGTCAGTGGGTaGCTCACAACCACAGACATT +
Preference number: 4 (lower is better)
Translates to: LQAKSRTNSLCLEGMLTPSPVSG*LTTTDI
Trigger: AATGTCTGTGGTTGTGAGGCACCCACTGACTGGCGA...CGGGGTTAACATCCCTTCCAGGCACAGCGAGTTGGTTCTGCTTTTTGCCTGTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR GCA 90 bp GGTGGCATGACTCGTAGGCTCAAAGACTCACCACACTTATTGCATCTATTTCTGTCGGTTGTCGAGGGATaGCTCAGCCTCACGCCGGAA +
Preference number: 4 (lower is better)
Translates to: GGMTRRLKDSPHLLHLFLSVVEG*LSLTPE
Trigger: TTCCGGCGTGAGGCTGAGGCATCCCTCGACAACCGA...CAGAAATAGATGCAATAAGTGTGGTGAGTCTTTGAGCCTACGAGTCATGCCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR GCA 90 bp TTTTACAAGACTAGGGTTAGGCTATACTTGCCCACAGCAGACCTGGCTTCTTTGTCGGTTGTCGAGGGATaGCTCAGCCTCACGCCGGAA +
Preference number: 4 (lower is better)
Translates to: FYKTRVRLYLPTADLASLSVVEG*LSLTPE
Trigger: TTCCGGCGTGAGGCTGAGGCATCCCTCGACAACCGA...CAAAGAAGCCAGGTCTGCTGTGGGCAAGTATAGCCTAACCCTAGTCTTGTAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR GCA 90 bp ACCAACTCGCTGTGCCTGGAAGGGATGTTAACCCCGATTCAGCCATTACTGCAAGGGCAGGCCTCTGTCTaGTTCTCCAACTCTGGATTT +
Preference number: 4 (lower is better)
Translates to: TNSLCLEGMLTPIQPLLQGQASV*FSNSGF
Trigger: AAATCCAGAGTTGGAGAAGCAGACAGAGGCCTGCCC...TTGCAGTAATGGCTGAATCGGGGTTAACATCCCTTCCAGGCACAGCGAGTTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR GCA 90 bp GCTGTGCCTGGAAGGGATGTTAACCCCGATTCAGCCATTACTGCAATACACTTGCCCTCATGCACTCCGTaGCACATCTCTGTTCGTGGA +
Preference number: 4 (lower is better)
Translates to: AVPGRDVNPDSAITAIHLPSCTP*HISVRG
Trigger: TCCACGAACAGAGATGTGGCACGGAGTGCATGAGGG...CAAGTGTATTGCAGTAATGGCTGAATCGGGGTTAACATCCCTTCCAGGCACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR GCA 90 bp TTTCTTTGGCTTACAGGCAAAAAGCAGAACCAACTCGCTGTGCCTGGAAGGGATGCTCCAGGACAGTGCTaGAAATGGCCCTTCCAGTCC +
Preference number: 4 (lower is better)
Translates to: FLWLTGKKQNQLAVPGRDAPGQC*KWPFQS
Trigger: GGACTGGAAGGGCCATTTGCAGCACTGTCCTGGAGC...ATCCCTTCCAGGCACAGCGAGTTGGTTCTGCTTTTTGCCTGTAAGCCAAAGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp TCACTTTGCCAGGTATGTGTACCTGCCCCTTATTGGGCAATCCTCATGCAGGATCGGTGTGGTTTCCGATaGACAATGGGGGAAGCCATC +
Preference number: 4 (lower is better)
Translates to: SLCQVCVPAPYWAILMQDRCGFR*TMGEAI
Trigger: GATGGCTTCCCCCATTGTCCATCGGAAACCACACCG...ATCCTGCATGAGGATTGCCCAATAAGGGGCAGGTACACATACCTGGCAAAGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327245.10
CDS-3UTR CCA 90 bp CCAGGGTCCTCTAGACTCCAAGATTCAGTGATCTGTTGGGGGTTGGGTGCTTCCGAGAAGGACAGGCATTaGTATTGGGTCCACTCTTCA +
Preference number: 4 (lower is better)
Translates to: PGSSRLQDSVICWGLGASEKDRH*YWVHSS
Trigger: TGAAGAGTGGACCCAATACCAATGCCTGTCCTTCTC...GGAAGCACCCAACCCCCAACAGATCACTGAATCTTGGAGTCTAGAGGACCCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520108.1
CDS-3UTR CCA 90 bp GGGTCCTCTAGACTCCAAGATTCAGTGATCTGTTGGGGGTTGGGTGCTTCCCTGGTGGATGAGAATGACTaGCTGAGGCTCAATAGCTTC +
Preference number: 4 (lower is better)
Translates to: GSSRLQDSVICWGLGASLVDEND*LRLNSF
Trigger: GAAGCTATTGAGCCTCAGCCAGTCATTCTCATCCAC...CAGGGAAGCACCCAACCCCCAACAGATCACTGAATCTTGGAGTCTAGAGGACCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520108.1
CDS-3UTR CCA 90 bp GGTGGCATGACTCGTAGGCTCAAAGACTCACCACACTTATTGCATCTATTTCTGTCCAGGATGTCGCCCTaGTCCCACATGCTGCTCCTG +
Preference number: 4 (lower is better)
Translates to: GGMTRRLKDSPHLLHLFLSRMSP*SHMLLL
Trigger: CAGGAGCAGCATGTGGGACCAGGGCGACATCCTGGA...CAGAAATAGATGCAATAAGTGTGGTGAGTCTTTGAGCCTACGAGTCATGCCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp GCAAGAGACTTAGCCCCAGTAGTCTTCAGTTTCCTTATCTGTGGGGAAATGGGGCAGCCTCCCGCAGAGTaGCAATCGTATCTGGAACTC +
Preference number: 4 (lower is better)
Translates to: ARDLAPVVFSFLICGEMGQPPAE*QSYLEL
Trigger: GAGTTCCAGATACGATTGCCACTCTGCGGGAGGCTG...CCCCATTTCCCCACAGATAAGGAAACTGAAGACTACTGGGGCTAAGTCTCTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000520108.1
CDS-3UTR CCA 90 bp TTGCTCCAGTTTCCTAGGATTTGGGACTCTGTAAAAATGAGAAAGTCCCAGGCAGTCAGGACCCAGAGCTaGATCCCAGCCTCCCGCAGA +
Preference number: 4 (lower is better)
Translates to: LLQFPRIWDSVKMRKSQAVRTQS*IPASRR
Trigger: TCTGCGGGAGGCTGGGATCCAGCTCTGGGTCCTGAC...TGCCTGGGACTTTCTCATTTTTACAGAGTCCCAAATCCTAGGAAACTGGAGCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp GGTGGCATGACTCGTAGGCTCAAAGACTCACCACACTTATTGCATCTATTTCTGCACTGGGTGGTGAGTTaGTCGAGCCACTTCGGGGAC +
Preference number: 4 (lower is better)
Translates to: GGMTRRLKDSPHLLHLFLHWVVS*SSHFGD
Trigger: GTCCCCGAAGTGGCTCGACCAACTCACCACCCAGTG...CAGAAATAGATGCAATAAGTGTGGTGAGTCTTTGAGCCTACGAGTCATGCCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp TTTCTTTGGCTTACAGGCAAAAAGCAGAACCAACTCGCTGTGCCTGGAAGGGATCTCTGGGATCGGCGATaGCTGCTCCTCTTTGAGCAC +
Preference number: 4 (lower is better)
Translates to: FLWLTGKKQNQLAVPGRDLWDRR*LLLFEH
Trigger: GTGCTCAAAGAGGAGCAGCCATCGCCGATCCCAGAG...ATCCCTTCCAGGCACAGCGAGTTGGTTCTGCTTTTTGCCTGTAAGCCAAAGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp TTACAGGCAAAAAGCAGAACCAACTCGCTGTGCCTGGAAGGGATGTTAACCCCGGTGTCTTCCAGAGGCTaGAAGGGGGTTTCAGCCTAT +
Preference number: 4 (lower is better)
Translates to: LQAKSRTNSLCLEGMLTPVSSRG*KGVSAY
Trigger: ATAGGCTGAAACCCCCTTCCAGCCTCTGGAAGACAC...CGGGGTTAACATCCCTTCCAGGCACAGCGAGTTGGTTCTGCTTTTTGCCTGTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp ACATCATCATCACTTTGCCAGGTATGTGTACCTGCCCCTTATTGGGCAATCCTCGGTTTGCCAGGAAGATaGTCAGAGGGCCAGCTCCCT +
Preference number: 4 (lower is better)
Translates to: TSSSLCQVCVPAPYWAILGLPGR*SEGQLP
Trigger: AGGGAGCTGGCCCTCTGACCATCTTCCTGGCAAACC...GAGGATTGCCCAATAAGGGGCAGGTACACATACCTGGCAAAGTGATGATGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp TTACAGGCAAAAAGCAGAACCAACTCGCTGTGCCTGGAAGGGATGTTAACCCCGAAGTCCCAGGCAAACTaGGACGGTTGGTCCTACAAG +
Preference number: 4 (lower is better)
Translates to: LQAKSRTNSLCLEGMLTPKSQAN*DGWSYK
Trigger: CTTGTAGGACCAACCGTCCCAGTTTGCCTGGGACTT...CGGGGTTAACATCCCTTCCAGGCACAGCGAGTTGGTTCTGCTTTTTGCCTGTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR TCA 90 bp CTGGTGCACCCGTTCCCTTTTGCATGTCTATTCTTCATGCCTCTTACACTAGCTCCATCTCGGTGTTTCTaGTGGTGCAGCCTCGAAGCA +
Preference number: 4 (lower is better)
Translates to: LVHPFPFACLFFMPLTLAPSRCF*WCSLEA
Trigger: TGCTTCGAGGCTGCACCATCAGAAACACCGAGATGG...AGCTAGTGTAAGAGGCATGAAGAATAGACATGCAAAAGGGAACGGGTGCACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR TCA 90 bp GACTTAATACCTATGTCAAGCCTGGGAAGAAAGGCAGTTCTAATCAACTTGCAGGGCCACAGGAGGCTGTaGGCTTTCACGGTGCCCCAT +
Preference number: 4 (lower is better)
Translates to: DLIPMSSLGRKAVLINLQGHRRL*AFTVPH
Trigger: ATGGGGCACCGTGAAAGCTCACAGCCTCCTGTGGCC...CTGCAAGTTGATTAGAACTGCCTTTCTTCCCAGGCTTGACATAGGTATTAAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR TCA 90 bp TTTTACAAGACTAGGGTTAGGCTATACTTGCCCACAGCAGACCTGGCTTCTTTGGGCAGGTCTGCTGTCTaGCAAGGTCTCCAACCACAG +
Preference number: 4 (lower is better)
Translates to: FYKTRVRLYLPTADLASLGRSAV*QGLQPQ
Trigger: CTGTGGTTGGAGACCTTGTCAGACAGCAGACCTGCC...CAAAGAAGCCAGGTCTGCTGTGGGCAAGTATAGCCTAACCCTAGTCTTGTAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR TCA 90 bp AGGCTATACTTGCCCACAGCAGACCTGGCTTCTTTGGACAGCCTATTAAAATTCCCCCAGAGCCTTGCTTaGGGGTTTGATGGTGACCCT +
Preference number: 4 (lower is better)
Translates to: RLYLPTADLASLDSLLKFPQSLA*GFDGDP
Trigger: AGGGTCACCATCAAACCCTCAAGCAAGGCTCTGGGG...GAATTTTAATAGGCTGTCCAAAGAAGCCAGGTCTGCTGTGGGCAAGTATAGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR TCA 90 bp GCTGGTGGCATGACTCGTAGGCTCAAAGACTCACCACACTTATTGCATCTATTTTCCGGGACACTAGTGTaGAGCTGTAGGCATGGGCAG +
Preference number: 4 (lower is better)
Translates to: AGGMTRRLKDSPHLLHLFSGTLV*SCRHGQ
Trigger: CTGCCCATGCCTACAGCTTCACACTAGTGTCCCGGA...AAATAGATGCAATAAGTGTGGTGAGTCTTTGAGCCTACGAGTCATGCCACCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR TCA 90 bp TTACAGGCAAAAAGCAGAACCAACTCGCTGTGCCTGGAAGGGATGTTAACCCCGGCTGTGCAGTTTCCATaGGAAGCTCATCTCGGTTGT +
Preference number: 4 (lower is better)
Translates to: LQAKSRTNSLCLEGMLTPAVQFP*EAHLGC
Trigger: ACAACCGAGATGAGCTTCTCATGGAAACTGCACAGC...CGGGGTTAACATCCCTTCCAGGCACAGCGAGTTGGTTCTGCTTTTTGCCTGTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR TCA 90 bp GGTGGCATGACTCGTAGGCTCAAAGACTCACCACACTTATTGCATCTATTTCTGGATGACACTGGGTGGTaGGTTGGTCGAGCCACTTCG +
Preference number: 4 (lower is better)
Translates to: GGMTRRLKDSPHLLHLFLDDTGW*VGRATS
Trigger: CGAAGTGGCTCGACCAACTCACCACCCAGTGTCATC...CAGAAATAGATGCAATAAGTGTGGTGAGTCTTTGAGCCTACGAGTCATGCCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR TCA 90 bp TTTTACAAGACTAGGGTTAGGCTATACTTGCCCACAGCAGACCTGGCTTCTTTGGATGACACTGGGTGGTaGGTTGGTCGAGCCACTTCG +
Preference number: 4 (lower is better)
Translates to: FYKTRVRLYLPTADLASLDDTGW*VGRATS
Trigger: CGAAGTGGCTCGACCAACTCACCACCCAGTGTCATC...CAAAGAAGCCAGGTCTGCTGTGGGCAAGTATAGCCTAACCCTAGTCTTGTAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR TCA 90 bp ACCAACTCGCTGTGCCTGGAAGGGATGTTAACCCCGATTCAGCCATTACTGCAATTATGGCTGGTGGCATaGCTCGTAGGCTCAAAGACT +
Preference number: 4 (lower is better)
Translates to: TNSLCLEGMLTPIQPLLQLWLVA*LVGSKT
Trigger: AGTCTTTGAGCCTACGAGTCATGCCACCAGCCATAA...TTGCAGTAATGGCTGAATCGGGGTTAACATCCCTTCCAGGCACAGCGAGTTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR GCA 90 bp GTTGGGTGCTTCCCTGGTGTACCCAAATCCCACCTAGAAGCCTGTGTCCTCTTGACAGGTCAAGGTCATTaGTCAAGAAGAACACTTGCC +
Preference number: 4 (lower is better)
Translates to: VGCFPGVPKSHLEACVLLTGQGH*SRRTLA
Trigger: GGCAAGTGTTCTTCTTGAGCAATGACCTTGACCTGT...CAAGAGGACACAGGCTTCTAGGTGGGATTTGGGTACACCAGGGAAGCACCCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520108.1
CDS-3UTR GCA 90 bp AGGCTATACTTGCCCACAGCAGACCTGGCTTCTTTGGACAGCCTATTAAAATTCCTGGCCCAAGTCCTCTaGGATGTTGAGGGCTCGACA +
Preference number: 4 (lower is better)
Translates to: RLYLPTADLASLDSLLKFLAQVL*DVEGST
Trigger: TGTCGAGCCCTCAACATCGCAGAGGACTTGGGCCAG...GAATTTTAATAGGCTGTCCAAAGAAGCCAGGTCTGCTGTGGGCAAGTATAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR GCA 90 bp ACATCATCATCACTTTGCCAGGTATGTGTACCTGCCCCTTATTGGGCAATCCTCTGTGAGCTTTCACGGTaGCCCATAGACCTTTGCCGG +
Preference number: 4 (lower is better)
Translates to: TSSSLCQVCVPAPYWAILCELSR*PIDLCR
Trigger: CCGGCAAAGGTCTATGGGGCACCGTGAAAGCTCACA...GAGGATTGCCCAATAAGGGGCAGGTACACATACCTGGCAAAGTGATGATGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR GCA 90 bp AAAGAGCAGCATCAGAGTGTTGGCTATAGTTTGGAACTTAGGAACAGGATCAGAGGGATCGGCGATGGCTaGTCCTCTTTGAGCACCGGC +
Preference number: 4 (lower is better)
Translates to: KEQHQSVGYSLELRNRIRGIGDG*SSLSTG
Trigger: GCCGGTGCTCAAAGAGGAGCAGCCATCGCCGATCCC...TCTGATCCTGTTCCTAAGTTCCAAACTATAGCCAACACTCTGATGCTGCTCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR GCA 90 bp CAATTCACATCATCATCACTTTGCCAGGTATGTGTACCTGCCCCTTATTGGGCAGCTCCAGGACAGTGCTaGAAATGGCCCTTCCAGTCC +
Preference number: 4 (lower is better)
Translates to: QFTSSSLCQVCVPAPYWAAPGQC*KWPFQS
Trigger: GGACTGGAAGGGCCATTTGCAGCACTGTCCTGGAGC...TGCCCAATAAGGGGCAGGTACACATACCTGGCAAAGTGATGATGATGTGAATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR GCA 90 bp ACCAACTCGCTGTGCCTGGAAGGGATGTTAACCCCGATTCAGCCATTACTGCAACCAGGTATGTGTACCTaGCCCTTATTGGGCAATCCT +
Preference number: 4 (lower is better)
Translates to: TNSLCLEGMLTPIQPLLQPGMCT*PLLGNP
Trigger: AGGATTGCCCAATAAGGGGCAGGTACACATACCTGG...TTGCAGTAATGGCTGAATCGGGGTTAACATCCCTTCCAGGCACAGCGAGTTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp ACATCATCATCACTTTGCCAGGTATGTGTACCTGCCCCTTATTGGGCAATCCTCAGCCAAAGCCAGTCCTaGTCTGGTCAGGATGCTCCA +
Preference number: 4 (lower is better)
Translates to: TSSSLCQVCVPAPYWAILSQSQS*SGQDAP
Trigger: TGGAGCATCCTGACCAGACCAGGACTGGCTTTGGCT...GAGGATTGCCCAATAAGGGGCAGGTACACATACCTGGCAAAGTGATGATGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp TTTCTTTGGCTTACAGGCAAAAAGCAGAACCAACTCGCTGTGCCTGGAAGGGATGCAGGCGAAGATCTGTaGCCGGAACCTCAAAGGAGA +
Preference number: 4 (lower is better)
Translates to: FLWLTGKKQNQLAVPGRDAGEDL*PEPQRR
Trigger: TCTCCTTTGAGGTTCCGGCCACAGATCTTCGCCTGC...ATCCCTTCCAGGCACAGCGAGTTGGTTCTGCTTTTTGCCTGTAAGCCAAAGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327245.10
CDS-3UTR CCA 90 bp GCAAGAGACTTAGCCCCAGTAGTCTTCAGTTTCCTTATCTGTGGGGAAATGGGGGCTTCTCATAGTTGCTaGATCCTGGGCCCATCTAGC +
Preference number: 4 (lower is better)
Translates to: ARDLAPVVFSFLICGEMGASHSC*ILGPSS
Trigger: GCTAGATGGGCCCAGGATCCAGCAACTATGAGAAGC...CCCCATTTCCCCACAGATAAGGAAACTGAAGACTACTGGGGCTAAGTCTCTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000520108.1
CDS-3UTR CCA 90 bp AAGAATGGCTTTGGTCTAAACCGATTTGAGAACTCGATTCAACAAAAACAGCCTGGTAGTGGCCCTGGATaGGCACCCGGGCACTCTGGC +
Preference number: 4 (lower is better)
Translates to: KNGFGLNRFENSIQQKQPGSGPG*APGHSG
Trigger: GCCAGAGTGCCCGGGTGCCCATCCAGGGCCACTACC...AGGCTGTTTTTGTTGAATCGAGTTCTCAAATCGGTTTAGACCAAAGCCATTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp TGTGGCATTCTGCTTCAAGCCACCTGCATCCTAGAGAGCAAGGATTCAAACTCATGGAGAGGGAAGCCTTaGCAGGTCTGCTGTCTGACA +
Preference number: 4 (lower is better)
Translates to: CGILLQATCILESKDSNSWRGKP*QVCCLT
Trigger: TGTCAGACAGCAGACCTGCCAAGGCTTCCCTCTCCA...TGAGTTTGAATCCTTGCTCTCTAGGATGCAGGTGGCTTGAAGCAGAATGCCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp TTTCCTTATCTGTGGGGAAATGGGGAGACTAGACCAATAGTAGAATTTGGGAGACTGTGGTGGCCACGTTaGCCCCTAAGCTCTCCCCGA +
Preference number: 4 (lower is better)
Translates to: FPYLWGNGETRPIVEFGRLWWPR*PLSSPR
Trigger: TCGGGGAGAGCTTAGGGGCCAACGTGGCCACCACAG...TCTCCCAAATTCTACTATTGGTCTAGTCTCCCCATTTCCCCACAGATAAGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000520108.1
CDS-3UTR CCA 90 bp TTTCTTTGGCTTACAGGCAAAAAGCAGAACCAACTCGCTGTGCCTGGAAGGGATAGCCACCGTCATCAGTaGAGTCACCTCCACTGCACA +
Preference number: 4 (lower is better)
Translates to: FLWLTGKKQNQLAVPGRDSHRHQ*SHLHCT
Trigger: TGTGCAGTGGAGGTGACTCCACTGATGACGGTGGCT...ATCCCTTCCAGGCACAGCGAGTTGGTTCTGCTTTTTGCCTGTAAGCCAAAGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp TCACTTTGCCAGGTATGTGTACCTGCCCCTTATTGGGCAATCCTCATGCAGGATAATCTCGCCAGTCAGTaGGTGCCTCACAACCACAGA +
Preference number: 4 (lower is better)
Translates to: SLCQVCVPAPYWAILMQDNLASQ*VPHNHR
Trigger: TCTGTGGTTGTGAGGCACCCACTGACTGGCGAGATT...ATCCTGCATGAGGATTGCCCAATAAGGGGCAGGTACACATACCTGGCAAAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp GCTGGTGGCATGACTCGTAGGCTCAAAGACTCACCACACTTATTGCATCTATTTCATACTCTTCTGGAGTaGCGTGGAGCGGCAGCACAG +
Preference number: 4 (lower is better)
Translates to: AGGMTRRLKDSPHLLHLFHTLLE*RGAAAQ
Trigger: CTGTGCTGCCGCTCCACGCCACTCCAGAAGAGTATG...AAATAGATGCAATAAGTGTGGTGAGTCTTTGAGCCTACGAGTCATGCCACCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp TCACTTTGCCAGGTATGTGTACCTGCCCCTTATTGGGCAATCCTCATGCAGGATACTATCATACTCTTCTaGAGTGGCGTGGAGCGGCAG +
Preference number: 4 (lower is better)
Translates to: SLCQVCVPAPYWAILMQDTIILF*SGVERQ
Trigger: CTGCCGCTCCACGCCACTCCAGAAGAGTATGATAGT...ATCCTGCATGAGGATTGCCCAATAAGGGGCAGGTACACATACCTGGCAAAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp CTGGTGCACCCGTTCCCTTTTGCATGTCTATTCTTCATGCCTCTTACACTAGCTATGGTCAGTGAACTCTaGGATCGGCGATGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: LVHPFPFACLFFMPLTLAMVSEL*DRRWLL
Trigger: GAGCAGCCATCGCCGATCCCAGAGTTCACTGACCAT...AGCTAGTGTAAGAGGCATGAAGAATAGACATGCAAAAGGGAACGGGTGCACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp TCTTTTCCCTGTGAAGTGACACTTGCTCTGACTCTAACTGATGCAGGCCAGTGTATGGTCAGTGAACTCTaGGATCGGCGATGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: SFPCEVTLALTLTDAGQCMVSEL*DRRWLL
Trigger: GAGCAGCCATCGCCGATCCCAGAGTTCACTGACCAT...ACACTGGCCTGCATCAGTTAGAGTCAGAGCAAGTGTCACTTCACAGGGAAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp TTACAGGCAAAAAGCAGAACCAACTCGCTGTGCCTGGAAGGGATGTTAACCCCGAAACTAGAGGCCGACTaGGTTTCCCGTCTTTGTGTC +
Preference number: 4 (lower is better)
Translates to: LQAKSRTNSLCLEGMLTPKLEAD*VSRLCV
Trigger: GACACAAAGACGGGAAACCCAGTCGGCCTCTAGTTT...CGGGGTTAACATCCCTTCCAGGCACAGCGAGTTGGTTCTGCTTTTTGCCTGTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp TTACAGGCAAAAAGCAGAACCAACTCGCTGTGCCTGGAAGGGATGTTAACCCCGAGCTGGTGGGACATATaGTCTGTCAGCCAAAACAGG +
Preference number: 4 (lower is better)
Translates to: LQAKSRTNSLCLEGMLTPSWWDI*SVSQNR
Trigger: CCTGTTTTGGCTGACAGACCATATGTCCCACCAGCT...CGGGGTTAACATCCCTTCCAGGCACAGCGAGTTGGTTCTGCTTTTTGCCTGTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR TCA 90 bp TTTTACAAGACTAGGGTTAGGCTATACTTGCCCACAGCAGACCTGGCTTCTTTGCTGTACCTCCTGCTGTaGGAAGCCCTTCACGACACA +
Preference number: 4 (lower is better)
Translates to: FYKTRVRLYLPTADLASLLYLLL*EALHDT
Trigger: TGTGTCGTGAAGGGCTTCTCACAGCAGGAGGTACAG...CAAAGAAGCCAGGTCTGCTGTGGGCAAGTATAGCCTAACCCTAGTCTTGTAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR TCA 90 bp TTTTACAAGACTAGGGTTAGGCTATACTTGCCCACAGCAGACCTGGCTTCTTTGCCATCTCGGTGTTTCTaGTGGTGCAGCCTCGAAGCA +
Preference number: 4 (lower is better)
Translates to: FYKTRVRLYLPTADLASLPSRCF*WCSLEA
Trigger: TGCTTCGAGGCTGCACCATCAGAAACACCGAGATGG...CAAAGAAGCCAGGTCTGCTGTGGGCAAGTATAGCCTAACCCTAGTCTTGTAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR TCA 90 bp TGTGGCATTCTGCTTCAAGCCACCTGCATCCTAGAGAGCAAGGATTCAAACTCAAGTCCTCTGCGATGTTaGGGGCTCGACATTGAATGG +
Preference number: 4 (lower is better)
Translates to: CGILLQATCILESKDSNSSPLRC*GLDIEW
Trigger: CCATTCAATGTCGAGCCCTCAACATCGCAGAGGACT...TGAGTTTGAATCCTTGCTCTCTAGGATGCAGGTGGCTTGAAGCAGAATGCCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR TCA 90 bp TGTGGCATTCTGCTTCAAGCCACCTGCATCCTAGAGAGCAAGGATTCAAACTCAAATACTCGCTGCCCATaGTGGTGCAACGTCGGAACA +
Preference number: 4 (lower is better)
Translates to: CGILLQATCILESKDSNSNTRCP*WCNVGT
Trigger: TGTTCCGACGTTGCACCATCATGGGCAGCGAGTATT...TGAGTTTGAATCCTTGCTCTCTAGGATGCAGGTGGCTTGAAGCAGAATGCCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR TCA 90 bp GGTGGCATGACTCGTAGGCTCAAAGACTCACCACACTTATTGCATCTATTTCTGAGGAGGTTAGACCAGTaGCCTTTGCTGTGCCCCTAC +
Preference number: 4 (lower is better)
Translates to: GGMTRRLKDSPHLLHLFLRRLDQ*PLLCPY
Trigger: GTAGGGGCACAGCAAAGGTCACTGGTCTAACCTCCT...CAGAAATAGATGCAATAAGTGTGGTGAGTCTTTGAGCCTACGAGTCATGCCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327245.10
CDS-3UTR TCA 90 bp TGTGGCATTCTGCTTCAAGCCACCTGCATCCTAGAGAGCAAGGATTCAAACTCACAAAGCGGTGTCTCTTaGAGTCCTCCATGCCATCCT +
Preference number: 4 (lower is better)
Translates to: CGILLQATCILESKDSNSQSGVS*SPPCHP
Trigger: AGGATGGCATGGAGGACTTCAAGAGACACCGCTTTG...TGAGTTTGAATCCTTGCTCTCTAGGATGCAGGTGGCTTGAAGCAGAATGCCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327245.10
CDS-3UTR TCA 90 bp TTACAGGCAAAAAGCAGAACCAACTCGCTGTGCCTGGAAGGGATGTTAACCCCGATGTCTTCCCATCGATaGCCAATCCAGCTTCTGGAA +
Preference number: 4 (lower is better)
Translates to: LQAKSRTNSLCLEGMLTPMSSHR*PIQLLE
Trigger: TTCCAGAAGCTGGATTGGTCATCGATGGGAAGACAT...CGGGGTTAACATCCCTTCCAGGCACAGCGAGTTGGTTCTGCTTTTTGCCTGTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR TCA 90 bp GCTGGTGGCATGACTCGTAGGCTCAAAGACTCACCACACTTATTGCATCTATTTCAAAGTCGCTGGACATaGCAGCCTGCATGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: AGGMTRRLKDSPHLLHLFQSRWT*QPACLP
Trigger: AGGAAGGCATGCAGGCTGTCATGTCCAGCGACTTTG...AAATAGATGCAATAAGTGTGGTGAGTCTTTGAGCCTACGAGTCATGCCACCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR TCA 90 bp CTGGTGCACCCGTTCCCTTTTGCATGTCTATTCTTCATGCCTCTTACACTAGCTCTGTCCTGTGATAGATaGCACTGGGTGGTGAGTTGG +
Preference number: 4 (lower is better)
Translates to: LVHPFPFACLFFMPLTLALSCDR*HWVVSW
Trigger: CCAACTCACCACCCAGTGTCATCTATCACAGGACAG...AGCTAGTGTAAGAGGCATGAAGAATAGACATGCAAAAGGGAACGGGTGCACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR TCA 90 bp CTGGTGCACCCGTTCCCTTTTGCATGTCTATTCTTCATGCCTCTTACACTAGCTATGGCTGCTCCTCTTTaGGCACCGGCACATATCAGT +
Preference number: 4 (lower is better)
Translates to: LVHPFPFACLFFMPLTLAMAAPL*APAHIS
Trigger: ACTGATATGTGCCGGTGCTCAAAGAGGAGCAGCCAT...AGCTAGTGTAAGAGGCATGAAGAATAGACATGCAAAAGGGAACGGGTGCACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR TCA 90 bp ACATCATCATCACTTTGCCAGGTATGTGTACCTGCCCCTTATTGGGCAATCCTCTCCTCATATGGTCAGTaGACTCTGGGATCGGCGATG +
Preference number: 4 (lower is better)
Translates to: TSSSLCQVCVPAPYWAILSSYGQ*TLGSAM
Trigger: CATCGCCGATCCCAGAGTTCACTGACCATATGAGGA...GAGGATTGCCCAATAAGGGGCAGGTACACATACCTGGCAAAGTGATGATGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR TCA 90 bp GGGTCCTCTAGACTCCAAGATTCAGTGATCTGTTGGGGGTTGGGTGCTTCCCTGGAGAATCACCTCACCTaGTTCTCTGTATTGATGGTA +
Preference number: 4 (lower is better)
Translates to: GSSRLQDSVICWGLGASLENHLT*FSVLMV
Trigger: TACCATCAATACAGAGAATCAGGTGAGGTGATTCTC...CAGGGAAGCACCCAACCCCCAACAGATCACTGAATCTTGGAGTCTAGAGGACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520108.1
CDS-3UTR GCA 90 bp GACTTAATACCTATGTCAAGCCTGGGAAGAAAGGCAGTTCTAATCAACTTGCAGGCCGCTCAATCTTGCTaGGTTTGTACCGGGGGCCAC +
Preference number: 4 (lower is better)
Translates to: DLIPMSSLGRKAVLINLQAAQSC*VCTGGH
Trigger: GTGGCCCCCGGTACAAACGCAGCAAGATTGAGCGGC...CTGCAAGTTGATTAGAACTGCCTTTCTTCCCAGGCTTGACATAGGTATTAAGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR GCA 90 bp TTGCTCCAGTTTCCTAGGATTTGGGACTCTGTAAAAATGAGAAAGTCCCAGGCAGAGGTGACTGGGCTGTaGTACTGTCCAGTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: LLQFPRIWDSVKMRKSQAEVTGL*YCPVSW
Trigger: CCAGCTGACTGGACAGTAGCACAGCCCAGTCACCTC...TGCCTGGGACTTTCTCATTTTTACAGAGTCCCAAATCCTAGGAAACTGGAGCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327245.10
CDS-3UTR GCA 90 bp GCTGTGCCTGGAAGGGATGTTAACCCCGATTCAGCCATTACTGCAATACACTTGGGGTGTATTTGGTTGTaGAGGTTCTGTTGCCAGGGT +
Preference number: 4 (lower is better)
Translates to: AVPGRDVNPDSAITAIHLGCIWL*RFCCQG
Trigger: ACCCTGGCAACAGAACCTGCACAACCAAATACACCC...CAAGTGTATTGCAGTAATGGCTGAATCGGGGTTAACATCCCTTCCAGGCACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327245.10
CDS-3UTR GCA 90 bp TCTTTTCCCTGTGAAGTGACACTTGCTCTGACTCTAACTGATGCAGGCCAGTGTAAGCCTTGGCAGGTCTaGTGTCTGACAAGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: SFPCEVTLALTLTDAGQCKPWQV*CLTRSP
Trigger: TGGAGACCTTGTCAGACAGCAGACCTGCCAAGGCTT...ACACTGGCCTGCATCAGTTAGAGTCAGAGCAAGTGTCACTTCACAGGGAAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR GCA 90 bp CTTTTTGCCTACTATATAGGTACTAGCTTAAGGTGGCTCAGTAACCCTTTCTGGAGGCGCACAGTCACCTaGTCAGGTGTCCGGGACACT +
Preference number: 4 (lower is better)
Translates to: LFAYYIGTSLRWLSNPFWRRTVT*SGVRDT
Trigger: AGTGTCCCGGACACCTGAGCAGGTGACTGTGCGCCT...CCAGAAAGGGTTACTGAGCCACCTTAAGCTAGTACCTATATAGTAGGCAAAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR GCA 90 bp CTGGTGCACCCGTTCCCTTTTGCATGTCTATTCTTCATGCCTCTTACACTAGCTGCATACAAGTCTAGATaGTTTTGGGTCCGGGCTCGG +
Preference number: 4 (lower is better)
Translates to: LVHPFPFACLFFMPLTLAAYKSR*FWVRAR
Trigger: CCGAGCCCGGACCCAAAAGCATCTAGACTTGTATGC...AGCTAGTGTAAGAGGCATGAAGAATAGACATGCAAAAGGGAACGGGTGCACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR GCA 90 bp TTTCCTTATCTGTGGGGAAATGGGGAGACTAGACCAATAGTAGAATTTGGGAGATCGGTTGTCGAGGGATaGCTCAGCCTCACGCCGGAA +
Preference number: 4 (lower is better)
Translates to: FPYLWGNGETRPIVEFGRSVVEG*LSLTPE
Trigger: TTCCGGCGTGAGGCTGAGGCATCCCTCGACAACCGA...TCTCCCAAATTCTACTATTGGTCTAGTCTCCCCATTTCCCCACAGATAAGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520108.1
CDS-3UTR GCA 90 bp AGGCTATACTTGCCCACAGCAGACCTGGCTTCTTTGGACAGCCTATTAAAATTCTCTGGAACTCCTTCCTaGAGCCGGTCTTCGATCCCA +
Preference number: 4 (lower is better)
Translates to: RLYLPTADLASLDSLLKFSGTPS*SRSSIP
Trigger: TGGGATCGAAGACCGGCTGCAGGAAGGAGTTCCAGA...GAATTTTAATAGGCTGTCCAAAGAAGCCAGGTCTGCTGTGGGCAAGTATAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR GCA 90 bp ACCAACTCGCTGTGCCTGGAAGGGATGTTAACCCCGATTCAGCCATTACTGCAAACTGACTCTTCCACATaGTTCCTCTTGGGAGGGTTA +
Preference number: 4 (lower is better)
Translates to: TNSLCLEGMLTPIQPLLQTDSST*FLLGGL
Trigger: TAACCCTCCCAAGAGGAAGCATGTGGAAGAGTCAGT...TTGCAGTAATGGCTGAATCGGGGTTAACATCCCTTCCAGGCACAGCGAGTTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR GCA 90 bp GGTGGCATGACTCGTAGGCTCAAAGACTCACCACACTTATTGCATCTATTTCTGCCCTCATGCACTCCGTaGCACATCTCTGTTCGTGGA +
Preference number: 4 (lower is better)
Translates to: GGMTRRLKDSPHLLHLFLPSCTP*HISVRG
Trigger: TCCACGAACAGAGATGTGGCACGGAGTGCATGAGGG...CAGAAATAGATGCAATAAGTGTGGTGAGTCTTTGAGCCTACGAGTCATGCCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR GCA 90 bp ACCAACTCGCTGTGCCTGGAAGGGATGTTAACCCCGATTCAGCCATTACTGCAAGCACCCGTTCCCTTTTaGATGTCTATTCTTCATGCC +
Preference number: 4 (lower is better)
Translates to: TNSLCLEGMLTPIQPLLQAPVPF*MSILHA
Trigger: GGCATGAAGAATAGACATGCAAAAGGGAACGGGTGC...TTGCAGTAATGGCTGAATCGGGGTTAACATCCCTTCCAGGCACAGCGAGTTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR GCA 90 bp CTGGTGCACCCGTTCCCTTTTGCATGTCTATTCTTCATGCCTCTTACACTAGCTGGGTTAGGCTATACTTaGCCACAGCAGACCTGGCTT +
Preference number: 4 (lower is better)
Translates to: LVHPFPFACLFFMPLTLAGLGYT*PQQTWL
Trigger: AAGCCAGGTCTGCTGTGGGCAAGTATAGCCTAACCC...AGCTAGTGTAAGAGGCATGAAGAATAGACATGCAAAAGGGAACGGGTGCACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR GCA 90 bp TGTGGCATTCTGCTTCAAGCCACCTGCATCCTAGAGAGCAAGGATTCAAACTCATTAGCTCCAGGACAGTaGTGCAAATGGCCCTTCCAG +
Preference number: 4 (lower is better)
Translates to: CGILLQATCILESKDSNSLAPGQ*CKWPFQ
Trigger: CTGGAAGGGCCATTTGCAGCACTGTCCTGGAGCTAA...TGAGTTTGAATCCTTGCTCTCTAGGATGCAGGTGGCTTGAAGCAGAATGCCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR GCA 90 bp TCTTTTCCCTGTGAAGTGACACTTGCTCTGACTCTAACTGATGCAGGCCAGTGTTTAGCTCCAGGACAGTaGTGCAAATGGCCCTTCCAG +
Preference number: 4 (lower is better)
Translates to: SFPCEVTLALTLTDAGQCLAPGQ*CKWPFQ
Trigger: CTGGAAGGGCCATTTGCAGCACTGTCCTGGAGCTAA...ACACTGGCCTGCATCAGTTAGAGTCAGAGCAAGTGTCACTTCACAGGGAAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR GCA 90 bp CAATTCACATCATCATCACTTTGCCAGGTATGTGTACCTGCCCCTTATTGGGCAGCAGGTGTGGCATTCTaGTTCAAGCCACCTGCATCC +
Preference number: 4 (lower is better)
Translates to: QFTSSSLCQVCVPAPYWAAGVAF*FKPPAS
Trigger: GGATGCAGGTGGCTTGAAGCAGAATGCCACACCTGC...TGCCCAATAAGGGGCAGGTACACATACCTGGCAAAGTGATGATGATGTGAATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp TTGCTCCAGTTTCCTAGGATTTGGGACTCTGTAAAAATGAGAAAGTCCCAGGCAGCTGCCATTGGCATCTaGCACATCGAAGGGAGGGTG +
Preference number: 4 (lower is better)
Translates to: LLQFPRIWDSVKMRKSQAAAIGI*HIEGRV
Trigger: CACCCTCCCTTCGATGTGCCAGATGCCAATGGCAGC...TGCCTGGGACTTTCTCATTTTTACAGAGTCCCAAATCCTAGGAAACTGGAGCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp TCACTTTGCCAGGTATGTGTACCTGCCCCTTATTGGGCAATCCTCATGCAGGATATGGGGATCAGCACCTaGAGCAGGATGATCATTGTG +
Preference number: 4 (lower is better)
Translates to: SLCQVCVPAPYWAILMQDMGIST*SRMIIV
Trigger: CACAATGATCATCCTGCTCCAGGTGCTGATCCCCAT...ATCCTGCATGAGGATTGCCCAATAAGGGGCAGGTACACATACCTGGCAAAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp ACCAACTCGCTGTGCCTGGAAGGGATGTTAACCCCGATTCAGCCATTACTGCAAAGACATACAAAGAGATaGGGATCAGCACCTGGAGCA +
Preference number: 4 (lower is better)
Translates to: TNSLCLEGMLTPIQPLLQRHTKR*GSAPGA
Trigger: TGCTCCAGGTGCTGATCCCCATCTCTTTGTATGTCT...TTGCAGTAATGGCTGAATCGGGGTTAACATCCCTTCCAGGCACAGCGAGTTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp GGGTCCTCTAGACTCCAAGATTCAGTGATCTGTTGGGGGTTGGGTGCTTCCCTGGGGCTCGACATTGAATaGATAAATCGGTCTCTTCAT +
Preference number: 4 (lower is better)
Translates to: GSSRLQDSVICWGLGASLGLDIE*INRSLH
Trigger: ATGAAGAGACCGATTTATCCATTCAATGTCGAGCCC...CAGGGAAGCACCCAACCCCCAACAGATCACTGAATCTTGGAGTCTAGAGGACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520108.1
CDS-3UTR CCA 90 bp GCTGTGCCTGGAAGGGATGTTAACCCCGATTCAGCCATTACTGCAATACACTTGAAGATGTACTGGATCTaGCCCAAGTCCTCTGCGATG +
Preference number: 4 (lower is better)
Translates to: AVPGRDVNPDSAITAIHLKMYWI*PKSSAM
Trigger: CATCGCAGAGGACTTGGGCCAGATCCAGTACATCTT...CAAGTGTATTGCAGTAATGGCTGAATCGGGGTTAACATCCCTTCCAGGCACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp GCAAGAGACTTAGCCCCAGTAGTCTTCAGTTTCCTTATCTGTGGGGAAATGGGGAAGATGTACTGGATCTaGCCCAAGTCCTCTGCGATG +
Preference number: 4 (lower is better)
Translates to: ARDLAPVVFSFLICGEMGKMYWI*PKSSAM
Trigger: CATCGCAGAGGACTTGGGCCAGATCCAGTACATCTT...CCCCATTTCCCCACAGATAAGGAAACTGAAGACTACTGGGGCTAAGTCTCTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000520108.1
CDS-3UTR CCA 90 bp CAATTCACATCATCATCACTTTGCCAGGTATGTGTACCTGCCCCTTATTGGGCAGAGAGAGCAGCGGTGTaGTTTCCGATGGACAATGGG +
Preference number: 4 (lower is better)
Translates to: QFTSSSLCQVCVPAPYWAERAAV*FPMDNG
Trigger: CCCATTGTCCATCGGAAACCACACCGCTGCTCTCTC...TGCCCAATAAGGGGCAGGTACACATACCTGGCAAAGTGATGATGATGTGAATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327245.10
CDS-3UTR CCA 90 bp TTTCTTTGGCTTACAGGCAAAAAGCAGAACCAACTCGCTGTGCCTGGAAGGGATGGAATATGCTGTTGTTaGGGAACACGACCCGCTGCT +
Preference number: 4 (lower is better)
Translates to: FLWLTGKKQNQLAVPGRDGICCC*GTRPAA
Trigger: AGCAGCGGGTCGTGTTCCCCAACAACAGCATATTCC...ATCCCTTCCAGGCACAGCGAGTTGGTTCTGCTTTTTGCCTGTAAGCCAAAGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327245.10
CDS-3UTR CCA 90 bp TTACAGGCAAAAAGCAGAACCAACTCGCTGTGCCTGGAAGGGATGTTAACCCCGGACAGGCATTGGTATTaGGTCCACTCTTCACCATCT +
Preference number: 4 (lower is better)
Translates to: LQAKSRTNSLCLEGMLTPDRHWY*VHSSPS
Trigger: AGATGGTGAAGAGTGGACCCAATACCAATGCCTGTC...CGGGGTTAACATCCCTTCCAGGCACAGCGAGTTGGTTCTGCTTTTTGCCTGTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp TCTTTTCCCTGTGAAGTGACACTTGCTCTGACTCTAACTGATGCAGGCCAGTGTATAGTTGCTGGATCCTaGGCCCATCTAGCCGAGAAG +
Preference number: 4 (lower is better)
Translates to: SFPCEVTLALTLTDAGQCIVAGS*AHLAEK
Trigger: CTTCTCGGCTAGATGGGCCCAGGATCCAGCAACTAT...ACACTGGCCTGCATCAGTTAGAGTCAGAGCAAGTGTCACTTCACAGGGAAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp TTTCTTTGGCTTACAGGCAAAAAGCAGAACCAACTCGCTGTGCCTGGAAGGGATGCTTCTCATAGTTGCTaGATCCTGGGCCCATCTAGC +
Preference number: 4 (lower is better)
Translates to: FLWLTGKKQNQLAVPGRDASHSC*ILGPSS
Trigger: GCTAGATGGGCCCAGGATCCAGCAACTATGAGAAGC...ATCCCTTCCAGGCACAGCGAGTTGGTTCTGCTTTTTGCCTGTAAGCCAAAGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp GTTGGGTGCTTCCCTGGTGTACCCAAATCCCACCTAGAAGCCTGTGTCCTCTTGCAGCATCTCGAACCTTaGTCAGTAGGTTTTTATCTG +
Preference number: 4 (lower is better)
Translates to: VGCFPGVPKSHLEACVLLQHLEP*SVGFYL
Trigger: CAGATAAAAACCTACTGACCAAGGTTCGAGATGCTG...CAAGAGGACACAGGCTTCTAGGTGGGATTTGGGTACACCAGGGAAGCACCCAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520108.1
CDS-3UTR CCA 90 bp TCTTTTCCCTGTGAAGTGACACTTGCTCTGACTCTAACTGATGCAGGCCAGTGTGGAAGAAATCAGCAATaGAGGAGGTGGTGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: SFPCEVTLALTLTDAGQCGRNQQ*RRWWRG
Trigger: CCCTCTCCACCACCTCCTCCATTGCTGATTTCTTCC...ACACTGGCCTGCATCAGTTAGAGTCAGAGCAAGTGTCACTTCACAGGGAAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp TTACAGGCAAAAAGCAGAACCAACTCGCTGTGCCTGGAAGGGATGTTAACCCCGGTGGATGAGAATGACTaGCTGAGGCTCAATAGCTTC +
Preference number: 4 (lower is better)
Translates to: LQAKSRTNSLCLEGMLTPVDEND*LRLNSF
Trigger: GAAGCTATTGAGCCTCAGCCAGTCATTCTCATCCAC...CGGGGTTAACATCCCTTCCAGGCACAGCGAGTTGGTTCTGCTTTTTGCCTGTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp AAAGAGCAGCATCAGAGTGTTGGCTATAGTTTGGAACTTAGGAACAGGATCAGACATCCGAGTCTGTGGTaGCCACGTTGGCCCCTAAGC +
Preference number: 4 (lower is better)
Translates to: KEQHQSVGYSLELRNRIRHPSLW*PRWPLS
Trigger: GCTTAGGGGCCAACGTGGCCACCACAGACTCGGATG...TCTGATCCTGTTCCTAAGTTCCAAACTATAGCCAACACTCTGATGCTGCTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp CTGGTGCACCCGTTCCCTTTTGCATGTCTATTCTTCATGCCTCTTACACTAGCTAATCTCGCCAGTCAGTaGGTGCCTCACAACCACAGA +
Preference number: 4 (lower is better)
Translates to: LVHPFPFACLFFMPLTLANLASQ*VPHNHR
Trigger: TCTGTGGTTGTGAGGCACCCACTGACTGGCGAGATT...AGCTAGTGTAAGAGGCATGAAGAATAGACATGCAAAAGGGAACGGGTGCACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp AGATTCAGTGATCTGTTGGGGGTTGGGTGCTTCCCTGGTGTACCCAAATCCCACAAGTCTAGATGCTTTTaGGTCCGGGCTCGGATTTTT +
Preference number: 4 (lower is better)
Translates to: RFSDLLGVGCFPGVPKSHKSRCF*VRARIF
Trigger: AAAAATCCGAGCCCGGACCCAAAAGCATCTAGACTT...GTGGGATTTGGGTACACCAGGGAAGCACCCAACCCCCAACAGATCACTGAATCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520108.1
CDS-3UTR CCA 90 bp TATCTGTGGGGAAATGGGGAGACTAGACCAATAGTAGAATTTGGGAGAGGTAAACCTCACGCCGGAAACTaGCCCATCTCCGGAAGTCCT +
Preference number: 4 (lower is better)
Translates to: YLWGNGETRPIVEFGRGKPHAGN*PISGSP
Trigger: AGGACTTCCGGAGATGGGCCAGTTTCCGGCGTGAGG...TTTACCTCTCCCAAATTCTACTATTGGTCTAGTCTCCCCATTTCCCCACAGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520108.1
CDS-3UTR CCA 90 bp ACCAACTCGCTGTGCCTGGAAGGGATGTTAACCCCGATTCAGCCATTACTGCAAGCCAGTAATCAATCATaGTGGAGCTGGAGAAACCAC +
Preference number: 4 (lower is better)
Translates to: TNSLCLEGMLTPIQPLLQASNQS*WSWRNH
Trigger: GTGGTTTCTCCAGCTCCACCATGATTGATTACTGGC...TTGCAGTAATGGCTGAATCGGGGTTAACATCCCTTCCAGGCACAGCGAGTTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp GCTGTGCCTGGAAGGGATGTTAACCCCGATTCAGCCATTACTGCAATACACTTGAGGAGCACGACTCCGTaGAAAATGGTCCATGTCTTC +
Preference number: 4 (lower is better)
Translates to: AVPGRDVNPDSAITAIHLRSTTP*KMVHVF
Trigger: GAAGACATGGACCATTTTCCACGGAGTCGTGCTCCT...CAAGTGTATTGCAGTAATGGCTGAATCGGGGTTAACATCCCTTCCAGGCACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp GACTTAATACCTATGTCAAGCCTGGGAAGAAAGGCAGTTCTAATCAACTTGCAGCACTGGGTGGTGAGTTaGTCGAGCCACTTCGGGGAC +
Preference number: 4 (lower is better)
Translates to: DLIPMSSLGRKAVLINLQHWVVS*SSHFGD
Trigger: GTCCCCGAAGTGGCTCGACCAACTCACCACCCAGTG...CTGCAAGTTGATTAGAACTGCCTTTCTTCCCAGGCTTGACATAGGTATTAAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp TTTCTTTGGCTTACAGGCAAAAAGCAGAACCAACTCGCTGTGCCTGGAAGGGATAGGGTTAGAGCTCTTTaGGGTGCTGGCACTGAAGTC +
Preference number: 4 (lower is better)
Translates to: FLWLTGKKQNQLAVPGRDRVRAL*GAGTEV
Trigger: GACTTCAGTGCCAGCACCCCAAAGAGCTCTAACCCT...ATCCCTTCCAGGCACAGCGAGTTGGTTCTGCTTTTTGCCTGTAAGCCAAAGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp ACCAACTCGCTGTGCCTGGAAGGGATGTTAACCCCGATTCAGCCATTACTGCAACCACATCTCTGTTCGTaGAGTACTGACTCTTCCACA +
Preference number: 4 (lower is better)
Translates to: TNSLCLEGMLTPIQPLLQPHLCS*STDSST
Trigger: TGTGGAAGAGTCAGTACTCCACGAACAGAGATGTGG...TTGCAGTAATGGCTGAATCGGGGTTAACATCCCTTCCAGGCACAGCGAGTTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp TTACAGGCAAAAAGCAGAACCAACTCGCTGTGCCTGGAAGGGATGTTAACCCCGCCAGCACTTCCTCCATaGAAGTCAAGGTTGTTGAAG +
Preference number: 4 (lower is better)
Translates to: LQAKSRTNSLCLEGMLTPPALPP*KSRLLK
Trigger: CTTCAACAACCTTGACTTCCATGGAGGAAGTGCTGG...CGGGGTTAACATCCCTTCCAGGCACAGCGAGTTGGTTCTGCTTTTTGCCTGTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp GCTGGTGGCATGACTCGTAGGCTCAAAGACTCACCACACTTATTGCATCTATTTTTGTGTCAGACCCCTTaGGGCCAGCACTTCCTCCAT +
Preference number: 4 (lower is better)
Translates to: AGGMTRRLKDSPHLLHLFLCQTP*GQHFLH
Trigger: ATGGAGGAAGTGCTGGCCCCAAGGGGTCTGACACAA...AAATAGATGCAATAAGTGTGGTGAGTCTTTGAGCCTACGAGTCATGCCACCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp CTGGTGCACCCGTTCCCTTTTGCATGTCTATTCTTCATGCCTCTTACACTAGCTAGATTCCCCAGCTGGTaGGACATATGGTCTGTCAGC +
Preference number: 4 (lower is better)
Translates to: LVHPFPFACLFFMPLTLARFPSW*DIWSVS
Trigger: GCTGACAGACCATATGTCCCACCAGCTGGGGAATCT...AGCTAGTGTAAGAGGCATGAAGAATAGACATGCAAAAGGGAACGGGTGCACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp CTGGTGCACCCGTTCCCTTTTGCATGTCTATTCTTCATGCCTCTTACACTAGCTGGACAGTGCTGCAAATaGCCCTTCCAGTCCAGGTTT +
Preference number: 4 (lower is better)
Translates to: LVHPFPFACLFFMPLTLAGQCCK*PFQSRF
Trigger: AAACCTGGACTGGAAGGGCCATTTGCAGCACTGTCC...AGCTAGTGTAAGAGGCATGAAGAATAGACATGCAAAAGGGAACGGGTGCACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp ACATCATCATCACTTTGCCAGGTATGTGTACCTGCCCCTTATTGGGCAATCCTCGGACAGTGCTGCAAATaGCCCTTCCAGTCCAGGTTT +
Preference number: 4 (lower is better)
Translates to: TSSSLCQVCVPAPYWAILGQCCK*PFQSRF
Trigger: AAACCTGGACTGGAAGGGCCATTTGCAGCACTGTCC...GAGGATTGCCCAATAAGGGGCAGGTACACATACCTGGCAAAGTGATGATGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp GCAAGAGACTTAGCCCCAGTAGTCTTCAGTTTCCTTATCTGTGGGGAAATGGGGAAGCCTGTGTCCTCTTaGTTGAGGGGTTGCTCTACA +
Preference number: 4 (lower is better)
Translates to: ARDLAPVVFSFLICGEMGKPVSS*LRGCST
Trigger: TGTAGAGCAACCCCTCAACCAAGAGGACACAGGCTT...CCCCATTTCCCCACAGATAAGGAAACTGAAGACTACTGGGGCTAAGTCTCTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000520108.1
3UTR CAA 72 bp GGCTTGATTTACAGAGGGGCAAGAGTAGGTGACCAGTaGTACCAGTTGCTCCAGTTTCCTAGGATTTGGGAC +
Preference number: 4 (lower is better)
Translates to: GLIYRGARVGDQ*YQLLQFPRIWD
Trigger: GTCCCAAATCCTAGGAAACTGGAGCAACTGGTACAACTGGTCACCTACTCTTGCCCCTCTGTAAATCAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR TCA 90 bp TTTCTTTGGCTTACAGGCAAAAAGCAGAACCAACTCGCTGTGCCTGGAAGGGATCATGGCCTGCATAGATaGCAATGCCAACAGCCATCT +
Preference number: 4 (lower is better)
Translates to: FLWLTGKKQNQLAVPGRDHGLHR*QCQQPS
Trigger: AGATGGCTGTTGGCATTGTCATCTATGCAGGCCATG...ATCCCTTCCAGGCACAGCGAGTTGGTTCTGCTTTTTGCCTGTAAGCCAAAGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR TCA 90 bp ACCAACTCGCTGTGCCTGGAAGGGATGTTAACCCCGATTCAGCCATTACTGCAATTGAGGGCTCGACATTaGATGGATAAATCGGTCTCT +
Preference number: 4 (lower is better)
Translates to: TNSLCLEGMLTPIQPLLQLRARH*MDKSVS
Trigger: AGAGACCGATTTATCCATTCAATGTCGAGCCCTCAA...TTGCAGTAATGGCTGAATCGGGGTTAACATCCCTTCCAGGCACAGCGAGTTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR TCA 90 bp CTTTTTGCCTACTATATAGGTACTAGCTTAAGGTGGCTCAGTAACCCTTTCTGGCCCCAGAGCCTTGCTTaGGGGTTTGATGGTGACCCT +
Preference number: 4 (lower is better)
Translates to: LFAYYIGTSLRWLSNPFWPQSLA*GFDGDP
Trigger: AGGGTCACCATCAAACCCTCAAGCAAGGCTCTGGGG...CCAGAAAGGGTTACTGAGCCACCTTAAGCTAGTACCTATATAGTAGGCAAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR TCA 90 bp TTACAGGCAAAAAGCAGAACCAACTCGCTGTGCCTGGAAGGGATGTTAACCCCGATGAGAATGACTGGCTaGGGCTCAATAGCTTCAACT +
Preference number: 4 (lower is better)
Translates to: LQAKSRTNSLCLEGMLTPMRMTG*GSIAST
Trigger: AGTTGAAGCTATTGAGCCTCAGCCAGTCATTCTCAT...CGGGGTTAACATCCCTTCCAGGCACAGCGAGTTGGTTCTGCTTTTTGCCTGTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR TCA 90 bp TCTTTTCCCTGTGAAGTGACACTTGCTCTGACTCTAACTGATGCAGGCCAGTGTGCTGTGCAGTTTCCATaGGAAGCTCATCTCGGTTGT +
Preference number: 4 (lower is better)
Translates to: SFPCEVTLALTLTDAGQCAVQFP*EAHLGC
Trigger: ACAACCGAGATGAGCTTCTCATGGAAACTGCACAGC...ACACTGGCCTGCATCAGTTAGAGTCAGAGCAAGTGTCACTTCACAGGGAAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR TCA 90 bp GCAAGAGACTTAGCCCCAGTAGTCTTCAGTTTCCTTATCTGTGGGGAAATGGGGCCAAGTAAGGTGAGTTaGTTCTCCAGATGCTGTGCA +
Preference number: 4 (lower is better)
Translates to: ARDLAPVVFSFLICGEMGPSKVS*FSRCCA
Trigger: TGCACAGCATCTGGAGAATCAACTCACCTTACTTGG...CCCCATTTCCCCACAGATAAGGAAACTGAAGACTACTGGGGCTAAGTCTCTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000520108.1
CDS-3UTR TCA 90 bp GCTGTGCCTGGAAGGGATGTTAACCCCGATTCAGCCATTACTGCAATACACTTGTGTCTCGCACCAGCTTaGCTATCATACTCTTCTGGA +
Preference number: 4 (lower is better)
Translates to: AVPGRDVNPDSAITAIHLCLAPA*LSYSSG
Trigger: TCCAGAAGAGTATGATAGTCAAGCTGGTGCGAGACA...CAAGTGTATTGCAGTAATGGCTGAATCGGGGTTAACATCCCTTCCAGGCACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR TCA 90 bp TTTTACAAGACTAGGGTTAGGCTATACTTGCCCACAGCAGACCTGGCTTCTTTGCTATGGAAAGGGTCATaGCGCGCAACTTGTCTCGCA +
Preference number: 4 (lower is better)
Translates to: FYKTRVRLYLPTADLASLLWKGS*RATCLA
Trigger: TGCGAGACAAGTTGCGCGTCATGACCCTTTCCATAG...CAAAGAAGCCAGGTCTGCTGTGGGCAAGTATAGCCTAACCCTAGTCTTGTAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR TCA 90 bp TTTCTTTGGCTTACAGGCAAAAAGCAGAACCAACTCGCTGTGCCTGGAAGGGATACCAGAAGAGCAGGTTaGCGTAGCACACGTTCTTGT +
Preference number: 4 (lower is better)
Translates to: FLWLTGKKQNQLAVPGRDTRRAG*RSTRSC
Trigger: ACAAGAACGTGTGCTACGTCAACCTGCTCTTCTGGT...ATCCCTTCCAGGCACAGCGAGTTGGTTCTGCTTTTTGCCTGTAAGCCAAAGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR TCA 90 bp GCTGGTGGCATGACTCGTAGGCTCAAAGACTCACCACACTTATTGCATCTATTTGTAGAAAGTGGGGTTTaGGAGCTGGCCTTCCATCAC +
Preference number: 4 (lower is better)
Translates to: AGGMTRRLKDSPHLLHLFVESGV*ELAFHH
Trigger: GTGATGGAAGGCCAGCTCTCAAACCCCACTTTCTAC...AAATAGATGCAATAAGTGTGGTGAGTCTTTGAGCCTACGAGTCATGCCACCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR TCA 90 bp TTACAGGCAAAAAGCAGAACCAACTCGCTGTGCCTGGAAGGGATGTTAACCCCGATCAGTCTGTCCTCTTaGGTAGGCCATTATCCTGTT +
Preference number: 4 (lower is better)
Translates to: LQAKSRTNSLCLEGMLTPISLSS*VGHYPV
Trigger: AACAGGATAATGGCCTACTCAAGAGGACAGACTGAT...CGGGGTTAACATCCCTTCCAGGCACAGCGAGTTGGTTCTGCTTTTTGCCTGTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR TCA 90 bp GGTGGCATGACTCGTAGGCTCAAAGACTCACCACACTTATTGCATCTATTTCTGTCCTCATATGGTCAGTaGACTCTGGGATCGGCGATG +
Preference number: 4 (lower is better)
Translates to: GGMTRRLKDSPHLLHLFLSSYGQ*TLGSAM
Trigger: CATCGCCGATCCCAGAGTTCACTGACCATATGAGGA...CAGAAATAGATGCAATAAGTGTGGTGAGTCTTTGAGCCTACGAGTCATGCCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR TCA 90 bp TCTTTTCCCTGTGAAGTGACACTTGCTCTGACTCTAACTGATGCAGGCCAGTGTTTATGGCTGGTGGCATaGCTCGTAGGCTCAAAGACT +
Preference number: 4 (lower is better)
Translates to: SFPCEVTLALTLTDAGQCLWLVA*LVGSKT
Trigger: AGTCTTTGAGCCTACGAGTCATGCCACCAGCCATAA...ACACTGGCCTGCATCAGTTAGAGTCAGAGCAAGTGTCACTTCACAGGGAAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR TCA 90 bp GTTGGGTGCTTCCCTGGTGTACCCAAATCCCACCTAGAAGCCTGTGTCCTCTTGGGTTGCTCTACACGTTaGTATCTGCAGATATCAATA +
Preference number: 4 (lower is better)
Translates to: VGCFPGVPKSHLEACVLLGCSTR*YLQISI
Trigger: TATTGATATCTGCAGATATCAACGTGTAGAGCAACC...CAAGAGGACACAGGCTTCTAGGTGGGATTTGGGTACACCAGGGAAGCACCCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520108.1
CDS-3UTR GCA 90 bp TTACAGGCAAAAAGCAGAACCAACTCGCTGTGCCTGGAAGGGATGTTAACCCCGAAGGAGGAGTATGTCTaGTGGGACAATCTCATTGCA +
Preference number: 4 (lower is better)
Translates to: LQAKSRTNSLCLEGMLTPKEEYV*WDNLIA
Trigger: TGCAATGAGATTGTCCCAGCAGACATACTCCTCCTT...CGGGGTTAACATCCCTTCCAGGCACAGCGAGTTGGTTCTGCTTTTTGCCTGTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR GCA 90 bp TTTCTTTGGCTTACAGGCAAAAAGCAGAACCAACTCGCTGTGCCTGGAAGGGATAGGTCCCATTCCAGATaGTGTGACCTACAGCTCCAA +
Preference number: 4 (lower is better)
Translates to: FLWLTGKKQNQLAVPGRDRSHSR*CDLQLQ
Trigger: TTGGAGCTGTAGGTCACAGCATCTGGAATGGGACCT...ATCCCTTCCAGGCACAGCGAGTTGGTTCTGCTTTTTGCCTGTAAGCCAAAGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR GCA 90 bp TTTCTTTGGCTTACAGGCAAAAAGCAGAACCAACTCGCTGTGCCTGGAAGGGATCTCAAGAAGAACACTTaGCCGAGCTTCACCAGCTCA +
Preference number: 4 (lower is better)
Translates to: FLWLTGKKQNQLAVPGRDLKKNT*PSFTSS
Trigger: TGAGCTGGTGAAGCTCGGGCAAGTGTTCTTCTTGAG...ATCCCTTCCAGGCACAGCGAGTTGGTTCTGCTTTTTGCCTGTAAGCCAAAGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR GCA 90 bp TCTTTTCCCTGTGAAGTGACACTTGCTCTGACTCTAACTGATGCAGGCCAGTGTCTCAAGAAGAACACTTaGCCGAGCTTCACCAGCTCA +
Preference number: 4 (lower is better)
Translates to: SFPCEVTLALTLTDAGQCLKKNT*PSFTSS
Trigger: TGAGCTGGTGAAGCTCGGGCAAGTGTTCTTCTTGAG...ACACTGGCCTGCATCAGTTAGAGTCAGAGCAAGTGTCACTTCACAGGGAAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR GCA 90 bp CTTTTTGCCTACTATATAGGTACTAGCTTAAGGTGGCTCAGTAACCCTTTCTGGCTGGCCCAAGTCCTCTaGGATGTTGAGGGCTCGACA +
Preference number: 4 (lower is better)
Translates to: LFAYYIGTSLRWLSNPFWLAQVL*DVEGST
Trigger: TGTCGAGCCCTCAACATCGCAGAGGACTTGGGCCAG...CCAGAAAGGGTTACTGAGCCACCTTAAGCTAGTACCTATATAGTAGGCAAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR GCA 90 bp GACTTAATACCTATGTCAAGCCTGGGAAGAAAGGCAGTTCTAATCAACTTGCAGTTGATGGTGACCCTCTaGCTGGGCTCGGTGGTTGTG +
Preference number: 4 (lower is better)
Translates to: DLIPMSSLGRKAVLINLQLMVTL*LGSVVV
Trigger: CACAACCACCGAGCCCAGGCAGAGGGTCACCATCAA...CTGCAAGTTGATTAGAACTGCCTTTCTTCCCAGGCTTGACATAGGTATTAAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR GCA 90 bp TATCTGTGGGGAAATGGGGAGACTAGACCAATAGTAGAATTTGGGAGAGGTAAATTGATGGTGACCCTCTaGCTGGGCTCGGTGGTTGTG +
Preference number: 4 (lower is better)
Translates to: YLWGNGETRPIVEFGRGKLMVTL*LGSVVV
Trigger: CACAACCACCGAGCCCAGGCAGAGGGTCACCATCAA...TTTACCTCTCCCAAATTCTACTATTGGTCTAGTCTCCCCATTTCCCCACAGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520108.1
CDS-3UTR GCA 90 bp ACATCATCATCACTTTGCCAGGTATGTGTACCTGCCCCTTATTGGGCAATCCTCTGGAGTCACCTCCACTaGACACAGATGCATCATCTC +
Preference number: 4 (lower is better)
Translates to: TSSSLCQVCVPAPYWAILWSHLH*TQMHHL
Trigger: GAGATGATGCATCTGTGTGCAGTGGAGGTGACTCCA...GAGGATTGCCCAATAAGGGGCAGGTACACATACCTGGCAAAGTGATGATGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR GCA 90 bp TGTTATAGGGGAATAGTGGTTATAACTTTTCCCTGTAAGATGGCACATTGGATGCGCCCTGGTCCCACATaGTGCTCCTGTAGCCACCGT +
Preference number: 4 (lower is better)
Translates to: CYRGIVVITFPCKMAHWMRPGPT*CSCSHR
Trigger: ACGGTGGCTACAGGAGCAGCATGTGGGACCAGGGCG...CATCCAATGTGCCATCTTACAGGGAAAAGTTATAACCACTATTCCCCTATAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR GCA 90 bp AAAGAGCAGCATCAGAGTGTTGGCTATAGTTTGGAACTTAGGAACAGGATCAGACCTCCTCCAAGGAAGTaGCTGACCCAGACTCCAGGA +
Preference number: 4 (lower is better)
Translates to: KEQHQSVGYSLELRNRIRPPPRK*LTQTPG
Trigger: TCCTGGAGTCTGGGTCAGGCACTTCCTTGGAGGAGG...TCTGATCCTGTTCCTAAGTTCCAAACTATAGCCAACACTCTGATGCTGCTCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR GCA 90 bp TTTCTTTGGCTTACAGGCAAAAAGCAGAACCAACTCGCTGTGCCTGGAAGGGATCAACCTTCTTGGCAATaGATAGTGTGCGCAGGCCAT +
Preference number: 4 (lower is better)
Translates to: FLWLTGKKQNQLAVPGRDQPSWQ*IVCAGH
Trigger: ATGGCCTGCGCACACTATGCATTGCCAAGAAGGTTG...ATCCCTTCCAGGCACAGCGAGTTGGTTCTGCTTTTTGCCTGTAAGCCAAAGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR GCA 90 bp AGGCTATACTTGCCCACAGCAGACCTGGCTTCTTTGGACAGCCTATTAAAATTCTTGACCGCTGTCTCCTaGTTATCTCCAGTCAGGACC +
Preference number: 4 (lower is better)
Translates to: RLYLPTADLASLDSLLKFLTAVS*LSPVRT
Trigger: GGTCCTGACTGGAGATAAGCAGGAGACAGCGGTCAA...GAATTTTAATAGGCTGTCCAAAGAAGCCAGGTCTGCTGTGGGCAAGTATAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR GCA 90 bp ACCAACTCGCTGTGCCTGGAAGGGATGTTAACCCCGATTCAGCCATTACTGCAATGCCAGGAGTGTTTCTaGAGAGATGTCTTTGTCAAG +
Preference number: 4 (lower is better)
Translates to: TNSLCLEGMLTPIQPLLQCQECF*RDVFVK
Trigger: CTTGACAAAGACATCTCTGCAGAAACACTCCTGGCA...TTGCAGTAATGGCTGAATCGGGGTTAACATCCCTTCCAGGCACAGCGAGTTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR GCA 90 bp TCACTTTGCCAGGTATGTGTACCTGCCCCTTATTGGGCAATCCTCATGCAGGATACTGTTTGCAAGATGTaGTGCCTGAGAGCAGCAGAA +
Preference number: 4 (lower is better)
Translates to: SLCQVCVPAPYWAILMQDTVCKM*CLRAAE
Trigger: TTCTGCTGCTCTCAGGCAGCACATCTTGCAAACAGT...ATCCTGCATGAGGATTGCCCAATAAGGGGCAGGTACACATACCTGGCAAAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR GCA 90 bp TCTTTTCCCTGTGAAGTGACACTTGCTCTGACTCTAACTGATGCAGGCCAGTGTAGAACCAACTCGCTGTaGCTGGAAGGGATGTTAACC +
Preference number: 4 (lower is better)
Translates to: SFPCEVTLALTLTDAGQCRTNSL*LEGMLT
Trigger: GGTTAACATCCCTTCCAGGCACAGCGAGTTGGTTCT...ACACTGGCCTGCATCAGTTAGAGTCAGAGCAAGTGTCACTTCACAGGGAAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR GCA 90 bp AGGCTATACTTGCCCACAGCAGACCTGGCTTCTTTGGACAGCCTATTAAAATTCGGGTTAGGCTATACTTaGCCACAGCAGACCTGGCTT +
Preference number: 4 (lower is better)
Translates to: RLYLPTADLASLDSLLKFGLGYT*PQQTWL
Trigger: AAGCCAGGTCTGCTGTGGGCAAGTATAGCCTAACCC...GAATTTTAATAGGCTGTCCAAAGAAGCCAGGTCTGCTGTGGGCAAGTATAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR GCA 90 bp CTGGTGCACCCGTTCCCTTTTGCATGTCTATTCTTCATGCCTCTTACACTAGCTCTGCTTCAAGCCACCTaGATCCTAGAGAGCAAGGAT +
Preference number: 4 (lower is better)
Translates to: LVHPFPFACLFFMPLTLALLQAT*ILESKD
Trigger: ATCCTTGCTCTCTAGGATGCAGGTGGCTTGAAGCAG...AGCTAGTGTAAGAGGCATGAAGAATAGACATGCAAAAGGGAACGGGTGCACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR GCA 90 bp TTGCTCCAGTTTCCTAGGATTTGGGACTCTGTAAAAATGAGAAAGTCCCAGGCAGCAGGTGTGGCATTCTaGTTCAAGCCACCTGCATCC +
Preference number: 4 (lower is better)
Translates to: LLQFPRIWDSVKMRKSQAAGVAF*FKPPAS
Trigger: GGATGCAGGTGGCTTGAAGCAGAATGCCACACCTGC...TGCCTGGGACTTTCTCATTTTTACAGAGTCCCAAATCCTAGGAAACTGGAGCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp AGGCTATACTTGCCCACAGCAGACCTGGCTTCTTTGGACAGCCTATTAAAATTCATGCTCACCTCAGGCTaGAAAGCATTGACCACAGGG +
Preference number: 4 (lower is better)
Translates to: RLYLPTADLASLDSLLKFMLTSG*KALTTG
Trigger: CCCTGTGGTCAATGCTTTCCAGCCTGAGGTGAGCAT...GAATTTTAATAGGCTGTCCAAAGAAGCCAGGTCTGCTGTGGGCAAGTATAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642502.1
CDS-3UTR CCA 90 bp CTGGTGCACCCGTTCCCTTTTGCATGTCTATTCTTCATGCCTCTTACACTAGCTATGGGGATCAGCACCTaGAGCAGGATGATCATTGTG +
Preference number: 4 (lower is better)
Translates to: LVHPFPFACLFFMPLTLAMGIST*SRMIIV
Trigger: CACAATGATCATCCTGCTCCAGGTGCTGATCCCCAT...AGCTAGTGTAAGAGGCATGAAGAATAGACATGCAAAAGGGAACGGGTGCACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp TCACTTTGCCAGGTATGTGTACCTGCCCCTTATTGGGCAATCCTCATGCAGGATAGACATACAAAGAGATaGGGATCAGCACCTGGAGCA +
Preference number: 4 (lower is better)
Translates to: SLCQVCVPAPYWAILMQDRHTKR*GSAPGA
Trigger: TGCTCCAGGTGCTGATCCCCATCTCTTTGTATGTCT...ATCCTGCATGAGGATTGCCCAATAAGGGGCAGGTACACATACCTGGCAAAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp GCAAGAGACTTAGCCCCAGTAGTCTTCAGTTTCCTTATCTGTGGGGAAATGGGGGACAGGCATTGGTATTaGGTCCACTCTTCACCATCT +
Preference number: 4 (lower is better)
Translates to: ARDLAPVVFSFLICGEMGDRHWY*VHSSPS
Trigger: AGATGGTGAAGAGTGGACCCAATACCAATGCCTGTC...CCCCATTTCCCCACAGATAAGGAAACTGAAGACTACTGGGGCTAAGTCTCTTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000520108.1
CDS-3UTR CCA 90 bp GCTGTGCCTGGAAGGGATGTTAACCCCGATTCAGCCATTACTGCAATACACTTGGAGAAGGACAGGCATTaGTATTGGGTCCACTCTTCA +
Preference number: 4 (lower is better)
Translates to: AVPGRDVNPDSAITAIHLEKDRH*YWVHSS
Trigger: TGAAGAGTGGACCCAATACCAATGCCTGTCCTTCTC...CAAGTGTATTGCAGTAATGGCTGAATCGGGGTTAACATCCCTTCCAGGCACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp GGTGGCATGACTCGTAGGCTCAAAGACTCACCACACTTATTGCATCTATTTCTGATAGTTGCTGGATCCTaGGCCCATCTAGCCGAGAAG +
Preference number: 4 (lower is better)
Translates to: GGMTRRLKDSPHLLHLFLIVAGS*AHLAEK
Trigger: CTTCTCGGCTAGATGGGCCCAGGATCCAGCAACTAT...CAGAAATAGATGCAATAAGTGTGGTGAGTCTTTGAGCCTACGAGTCATGCCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp CAATTCACATCATCATCACTTTGCCAGGTATGTGTACCTGCCCCTTATTGGGCAGCTTCTCATAGTTGCTaGATCCTGGGCCCATCTAGC +
Preference number: 4 (lower is better)
Translates to: QFTSSSLCQVCVPAPYWAASHSC*ILGPSS
Trigger: GCTAGATGGGCCCAGGATCCAGCAACTATGAGAAGC...TGCCCAATAAGGGGCAGGTACACATACCTGGCAAAGTGATGATGATGTGAATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp TTTTACAAGACTAGGGTTAGGCTATACTTGCCCACAGCAGACCTGGCTTCTTTGGGAAGAAATCAGCAATaGAGGAGGTGGTGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: FYKTRVRLYLPTADLASLGRNQQ*RRWWRG
Trigger: CCCTCTCCACCACCTCCTCCATTGCTGATTTCTTCC...CAAAGAAGCCAGGTCTGCTGTGGGCAAGTATAGCCTAACCCTAGTCTTGTAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp TGTTATAGGGGAATAGTGGTTATAACTTTTCCCTGTAAGATGGCACATTGGATGCTGTGGTGGCCACGTTaGCCCCTAAGCTCTCCCCGA +
Preference number: 4 (lower is better)
Translates to: CYRGIVVITFPCKMAHWMLWWPR*PLSSPR
Trigger: TCGGGGAGAGCTTAGGGGCCAACGTGGCCACCACAG...CATCCAATGTGCCATCTTACAGGGAAAAGTTATAACCACTATTCCCCTATAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp TTTCCTTATCTGTGGGGAAATGGGGAGACTAGACCAATAGTAGAATTTGGGAGATCTCATCCGAGTCTGTaGTGGCCACGTTGGCCCCTA +
Preference number: 4 (lower is better)
Translates to: FPYLWGNGETRPIVEFGRSHPSL*WPRWPL
Trigger: TAGGGGCCAACGTGGCCACCACAGACTCGGATGAGA...TCTCCCAAATTCTACTATTGGTCTAGTCTCCCCATTTCCCCACAGATAAGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000520108.1
CDS-3UTR CCA 90 bp CAATTCACATCATCATCACTTTGCCAGGTATGTGTACCTGCCCCTTATTGGGCACCGAGTCAGCACCCTTaGTGTAGACAACAATCTCGC +
Preference number: 4 (lower is better)
Translates to: QFTSSSLCQVCVPAPYWAPSQHP*CRQQSR
Trigger: GCGAGATTGTTGTCTACACCAAGGGTGCTGACTCGG...TGCCCAATAAGGGGCAGGTACACATACCTGGCAAAGTGATGATGATGTGAATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp AAGAATGGCTTTGGTCTAAACCGATTTGAGAACTCGATTCAACAAAAACAGCCTGTCAGGACCCAGAGCTaGATCCCAGCCTCCCGCAGA +
Preference number: 4 (lower is better)
Translates to: KNGFGLNRFENSIQQKQPVRTQS*IPASRR
Trigger: TCTGCGGGAGGCTGGGATCCAGCTCTGGGTCCTGAC...AGGCTGTTTTTGTTGAATCGAGTTCTCAAATCGGTTTAGACCAAAGCCATTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp AGGCTATACTTGCCCACAGCAGACCTGGCTTCTTTGGACAGCCTATTAAAATTCACTATCATACTCTTCTaGAGTGGCGTGGAGCGGCAG +
Preference number: 4 (lower is better)
Translates to: RLYLPTADLASLDSLLKFTIILF*SGVERQ
Trigger: CTGCCGCTCCACGCCACTCCAGAAGAGTATGATAGT...GAATTTTAATAGGCTGTCCAAAGAAGCCAGGTCTGCTGTGGGCAAGTATAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp ACCAACTCGCTGTGCCTGGAAGGGATGTTAACCCCGATTCAGCCATTACTGCAACGACTCCGTGGAAAATaGTCCATGTCTTCATTTCCA +
Preference number: 4 (lower is better)
Translates to: TNSLCLEGMLTPIQPLLQRLRGK*SMSSFP
Trigger: TGGAAATGAAGACATGGACCATTTTCCACGGAGTCG...TTGCAGTAATGGCTGAATCGGGGTTAACATCCCTTCCAGGCACAGCGAGTTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp CTGGTGCACCCGTTCCCTTTTGCATGTCTATTCTTCATGCCTCTTACACTAGCTAGACGAGGTAGAAAGTaGGGTTTGAGAGCTGGCCTT +
Preference number: 4 (lower is better)
Translates to: LVHPFPFACLFFMPLTLARRGRK*GLRAGL
Trigger: AAGGCCAGCTCTCAAACCCCACTTTCTACCTCGTCT...AGCTAGTGTAAGAGGCATGAAGAATAGACATGCAAAAGGGAACGGGTGCACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp ACATCATCATCACTTTGCCAGGTATGTGTACCTGCCCCTTATTGGGCAATCCTCAGACGAGGTAGAAAGTaGGGTTTGAGAGCTGGCCTT +
Preference number: 4 (lower is better)
Translates to: TSSSLCQVCVPAPYWAILRRGRK*GLRAGL
Trigger: AAGGCCAGCTCTCAAACCCCACTTTCTACCTCGTCT...GAGGATTGCCCAATAAGGGGCAGGTACACATACCTGGCAAAGTGATGATGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp GCTGTGCCTGGAAGGGATGTTAACCCCGATTCAGCCATTACTGCAATACACTTGGAGAAGAGCAACAACTaGTGTGAGAAAGCAGACGAG +
Preference number: 4 (lower is better)
Translates to: AVPGRDVNPDSAITAIHLEKSNN*CEKADE
Trigger: CTCGTCTGCTTTCTCACACCAGTTGTTGCTCTTCTC...CAAGTGTATTGCAGTAATGGCTGAATCGGGGTTAACATCCCTTCCAGGCACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp TTTTACAAGACTAGGGTTAGGCTATACTTGCCCACAGCAGACCTGGCTTCTTTGAGGGTTAGAGCTCTTTaGGGTGCTGGCACTGAAGTC +
Preference number: 4 (lower is better)
Translates to: FYKTRVRLYLPTADLASLRVRAL*GAGTEV
Trigger: GACTTCAGTGCCAGCACCCCAAAGAGCTCTAACCCT...CAAAGAAGCCAGGTCTGCTGTGGGCAAGTATAGCCTAACCCTAGTCTTGTAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp TTTCTTTGGCTTACAGGCAAAAAGCAGAACCAACTCGCTGTGCCTGGAAGGGATAGCTGGTGGGACATATaGTCTGTCAGCCAAAACAGG +
Preference number: 4 (lower is better)
Translates to: FLWLTGKKQNQLAVPGRDSWWDI*SVSQNR
Trigger: CCTGTTTTGGCTGACAGACCATATGTCCCACCAGCT...ATCCCTTCCAGGCACAGCGAGTTGGTTCTGCTTTTTGCCTGTAAGCCAAAGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp GCTGGTGGCATGACTCGTAGGCTCAAAGACTCACCACACTTATTGCATCTATTTAGATTCCCCAGCTGGTaGGACATATGGTCTGTCAGC +
Preference number: 4 (lower is better)
Translates to: AGGMTRRLKDSPHLLHLFRFPSW*DIWSVS
Trigger: GCTGACAGACCATATGTCCCACCAGCTGGGGAATCT...AAATAGATGCAATAAGTGTGGTGAGTCTTTGAGCCTACGAGTCATGCCACCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp GCTGGTGGCATGACTCGTAGGCTCAAAGACTCACCACACTTATTGCATCTATTTTGCCCACAGCAGACCTaGCTTCTTTGGACAGCCTAT +
Preference number: 4 (lower is better)
Translates to: AGGMTRRLKDSPHLLHLFCPQQT*LLWTAY
Trigger: ATAGGCTGTCCAAAGAAGCCAGGTCTGCTGTGGGCA...AAATAGATGCAATAAGTGTGGTGAGTCTTTGAGCCTACGAGTCATGCCACCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp ACCAACTCGCTGTGCCTGGAAGGGATGTTAACCCCGATTCAGCCATTACTGCAACTTTTCCCTGTAAGATaGCACATTGGATGGTCACAG +
Preference number: 4 (lower is better)
Translates to: TNSLCLEGMLTPIQPLLQLFPVR*HIGWSQ
Trigger: CTGTGACCATCCAATGTGCCATCTTACAGGGAAAAG...TTGCAGTAATGGCTGAATCGGGGTTAACATCCCTTCCAGGCACAGCGAGTTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR CAA 72 bp ATCATCACTTTGCCAGGTATGTGTACCTGCCCCTTATaGGGCAATCCTCATGCAGGATTCCTCCAAATACCC +
Preference number: 4 (lower is better)
Translates to: IITLPGMCTCPL*GNPHAGFLQIP
Trigger: GGGTATTTGGAGGAATCCTGCATGAGGATTGCCCAATAAGGGGCAGGTACACATACCTGGCAAAGTGATGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR CAA 72 bp ATGTCAAGCCTGGGAAGAAAGGCAGTTCTAATCAACTaGCAGGTGTGGCATTCTGCTTCAAGCCACCTGCAT +
Preference number: 4 (lower is better)
Translates to: MSSLGRKAVLIN*QVWHSASSHLH
Trigger: ATGCAGGTGGCTTGAAGCAGAATGCCACACCTGCAAGTTGATTAGAACTGCCTTTCTTCCCAGGCTTGACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR TCA 90 bp AAAGAGCAGCATCAGAGTGTTGGCTATAGTTTGGAACTTAGGAACAGGATCAGACCCAGGGGAGAAACATaGCAAGGAAAGAGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: KEQHQSVGYSLELRNRIRPRGET*QGKSLQ
Trigger: CTGCAGGCTCTTTCCTTGTCATGTTTCTCCCCTGGG...TCTGATCCTGTTCCTAAGTTCCAAACTATAGCCAACACTCTGATGCTGCTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642502.1
CDS-3UTR TCA 90 bp ACATCATCATCACTTTGCCAGGTATGTGTACCTGCCCCTTATTGGGCAATCCTCTGCATTTCATTTGGATaGAGTCTCCCACGCGCACAT +
Preference number: 4 (lower is better)
Translates to: TSSSLCQVCVPAPYWAILCISFG*SLPRAH
Trigger: ATGTGCGCGTGGGAGACTTCATCCAAATGAAATGCA...GAGGATTGCCCAATAAGGGGCAGGTACACATACCTGGCAAAGTGATGATGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR TCA 90 bp TTTCTTTGGCTTACAGGCAAAAAGCAGAACCAACTCGCTGTGCCTGGAAGGGATCGACACATCTTTGCTTaGGGTTTGTCTCTCCATCCA +
Preference number: 4 (lower is better)
Translates to: FLWLTGKKQNQLAVPGRDRHIFA*GLSLHP
Trigger: TGGATGGAGAGACAAACCTCAAGCAAAGATGTGTCG...ATCCCTTCCAGGCACAGCGAGTTGGTTCTGCTTTTTGCCTGTAAGCCAAAGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR TCA 90 bp GACTTAATACCTATGTCAAGCCTGGGAAGAAAGGCAGTTCTAATCAACTTGCAGCTGTACCTCCTGCTGTaGGAAGCCCTTCACGACACA +
Preference number: 4 (lower is better)
Translates to: DLIPMSSLGRKAVLINLQLYLLL*EALHDT
Trigger: TGTGTCGTGAAGGGCTTCTCACAGCAGGAGGTACAG...CTGCAAGTTGATTAGAACTGCCTTTCTTCCCAGGCTTGACATAGGTATTAAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR TCA 90 bp CAATTCACATCATCATCACTTTGCCAGGTATGTGTACCTGCCCCTTATTGGGCAAATTTGTCCATGAGGTaGCTGGGCTGTGCTACTGTC +
Preference number: 4 (lower is better)
Translates to: QFTSSSLCQVCVPAPYWANLSMR*LGCATV
Trigger: GACAGTAGCACAGCCCAGTCACCTCATGGACAAATT...TGCCCAATAAGGGGCAGGTACACATACCTGGCAAAGTGATGATGATGTGAATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327245.10
CDS-3UTR TCA 90 bp TTTCCTTATCTGTGGGGAAATGGGGAGACTAGACCAATAGTAGAATTTGGGAGACTCCTCCTCAGAGGCTaGGCACCTTTTTGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: FPYLWGNGETRPIVEFGRLLLRG*APFWLL
Trigger: GAGAAGCCAAAAAGGTGCTCAGCCTCTGAGGAGGAG...TCTCCCAAATTCTACTATTGGTCTAGTCTCCCCATTTCCCCACAGATAAGGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000520108.1
CDS-3UTR TCA 90 bp CTTTTTGCCTACTATATAGGTACTAGCTTAAGGTGGCTCAGTAACCCTTTCTGGCTCCTCCTCAGAGGCTaGGCACCTTTTTGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: LFAYYIGTSLRWLSNPFWLLLRG*APFWLL
Trigger: GAGAAGCCAAAAAGGTGCTCAGCCTCTGAGGAGGAG...CCAGAAAGGGTTACTGAGCCACCTTAAGCTAGTACCTATATAGTAGGCAAAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR TCA 90 bp GCAAGAGACTTAGCCCCAGTAGTCTTCAGTTTCCTTATCTGTGGGGAAATGGGGATGAGAATGACTGGCTaGGGCTCAATAGCTTCAACT +
Preference number: 4 (lower is better)
Translates to: ARDLAPVVFSFLICGEMGMRMTG*GSIAST
Trigger: AGTTGAAGCTATTGAGCCTCAGCCAGTCATTCTCAT...CCCCATTTCCCCACAGATAAGGAAACTGAAGACTACTGGGGCTAAGTCTCTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000520108.1
CDS-3UTR TCA 90 bp TGTGGCATTCTGCTTCAAGCCACCTGCATCCTAGAGAGCAAGGATTCAAACTCACCAAGTAAGGTGAGTTaGTTCTCCAGATGCTGTGCA +
Preference number: 4 (lower is better)
Translates to: CGILLQATCILESKDSNSPSKVS*FSRCCA
Trigger: TGCACAGCATCTGGAGAATCAACTCACCTTACTTGG...TGAGTTTGAATCCTTGCTCTCTAGGATGCAGGTGGCTTGAAGCAGAATGCCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR TCA 90 bp TTTTACAAGACTAGGGTTAGGCTATACTTGCCCACAGCAGACCTGGCTTCTTTGAGGAATGGGCAATGTTaGCCGCTGTCTCCTGCTTAT +
Preference number: 4 (lower is better)
Translates to: FYKTRVRLYLPTADLASLRNGQC*PLSPAY
Trigger: ATAAGCAGGAGACAGCGGTCAACATTGCCCATTCCT...CAAAGAAGCCAGGTCTGCTGTGGGCAAGTATAGCCTAACCCTAGTCTTGTAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR TCA 90 bp TTTCTTTGGCTTACAGGCAAAAAGCAGAACCAACTCGCTGTGCCTGGAAGGGATTGTCTCGCACCAGCTTaGCTATCATACTCTTCTGGA +
Preference number: 4 (lower is better)
Translates to: FLWLTGKKQNQLAVPGRDCLAPA*LSYSSG
Trigger: TCCAGAAGAGTATGATAGTCAAGCTGGTGCGAGACA...ATCCCTTCCAGGCACAGCGAGTTGGTTCTGCTTTTTGCCTGTAAGCCAAAGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR TCA 90 bp TTGCTCCAGTTTCCTAGGATTTGGGACTCTGTAAAAATGAGAAAGTCCCAGGCACTATGGAAAGGGTCATaGCGCGCAACTTGTCTCGCA +
Preference number: 4 (lower is better)
Translates to: LLQFPRIWDSVKMRKSQALWKGS*RATCLA
Trigger: TGCGAGACAAGTTGCGCGTCATGACCCTTTCCATAG...TGCCTGGGACTTTCTCATTTTTACAGAGTCCCAAATCCTAGGAAACTGGAGCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR TCA 90 bp AAGAATGGCTTTGGTCTAAACCGATTTGAGAACTCGATTCAACAAAAACAGCCTTCCCCGGATGAGAGTTaGGCTGAGGAGTCCCCTGAG +
Preference number: 4 (lower is better)
Translates to: KNGFGLNRFENSIQQKQPSPDES*AEESPE
Trigger: CTCAGGGGACTCCTCAGCTCAACTCTCATCCGGGGA...AGGCTGTTTTTGTTGAATCGAGTTCTCAAATCGGTTTAGACCAAAGCCATTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR TCA 90 bp TTTCTTTGGCTTACAGGCAAAAAGCAGAACCAACTCGCTGTGCCTGGAAGGGATCTAGGTGGCCTCTGTTaGGTTTGTACAGATTTCTGC +
Preference number: 4 (lower is better)
Translates to: FLWLTGKKQNQLAVPGRDLGGLC*VCTDFC
Trigger: GCAGAAATCTGTACAAACTCAACAGAGGCCACCTAG...ATCCCTTCCAGGCACAGCGAGTTGGTTCTGCTTTTTGCCTGTAAGCCAAAGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR TCA 90 bp TTACAGGCAAAAAGCAGAACCAACTCGCTGTGCCTGGAAGGGATGTTAACCCCGGAAACTTCCATATCCTaGGATATTGCCTGGGTTGAT +
Preference number: 4 (lower is better)
Translates to: LQAKSRTNSLCLEGMLTPETSIS*DIAWVD
Trigger: ATCAACCCAGGCAATATCTCAGGATATGGAAGTTTC...CGGGGTTAACATCCCTTCCAGGCACAGCGAGTTGGTTCTGCTTTTTGCCTGTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR TCA 90 bp TCACTTTGCCAGGTATGTGTACCTGCCCCTTATTGGGCAATCCTCATGCAGGATTTTAACTCTGGGCACTaGGGGGTAAATAAACCCAGA +
Preference number: 4 (lower is better)
Translates to: SLCQVCVPAPYWAILMQDFNSGH*GVNKPR
Trigger: TCTGGGTTTATTTACCCCTCAGTGCCCAGAGTTAAA...ATCCTGCATGAGGATTGCCCAATAAGGGGCAGGTACACATACCTGGCAAAGTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR TCA 90 bp TTACAGGCAAAAAGCAGAACCAACTCGCTGTGCCTGGAAGGGATGTTAACCCCGTTACTGCAATACACTTaGGATGAAGCCCTTATGTGC +
Preference number: 4 (lower is better)
Translates to: LQAKSRTNSLCLEGMLTPLLQYT*DEALMC
Trigger: GCACATAAGGGCTTCATCTCAAGTGTATTGCAGTAA...CGGGGTTAACATCCCTTCCAGGCACAGCGAGTTGGTTCTGCTTTTTGCCTGTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR TCA 90 bp TTTTACAAGACTAGGGTTAGGCTATACTTGCCCACAGCAGACCTGGCTTCTTTGTGGTCACAGTTGGCTTaGTTTACAGAGGGGCAAGAG +
Preference number: 4 (lower is better)
Translates to: FYKTRVRLYLPTADLASLWSQLA*FTEGQE
Trigger: CTCTTGCCCCTCTGTAAATCAAGCCAACTGTGACCA...CAAAGAAGCCAGGTCTGCTGTGGGCAAGTATAGCCTAACCCTAGTCTTGTAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR GCA 90 bp TGTGGCATTCTGCTTCAAGCCACCTGCATCCTAGAGAGCAAGGATTCAAACTCACACAGATTGGTATCATaGTCACCTCAGGCTGGAAAG +
Preference number: 4 (lower is better)
Translates to: CGILLQATCILESKDSNSHRLVS*SPQAGK
Trigger: CTTTCCAGCCTGAGGTGAGCATGATACCAATCTGTG...TGAGTTTGAATCCTTGCTCTCTAGGATGCAGGTGGCTTGAAGCAGAATGCCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642502.1
CDS-3UTR GCA 90 bp TTACAGGCAAAAAGCAGAACCAACTCGCTGTGCCTGGAAGGGATGTTAACCCCGTTCACGACACATCTTTaGTTGAGGTTTGTCTCTCCA +
Preference number: 4 (lower is better)
Translates to: LQAKSRTNSLCLEGMLTPFTTHL*LRFVSP
Trigger: TGGAGAGACAAACCTCAAGCAAAGATGTGTCGTGAA...CGGGGTTAACATCCCTTCCAGGCACAGCGAGTTGGTTCTGCTTTTTGCCTGTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR GCA 90 bp CAATTCACATCATCATCACTTTGCCAGGTATGTGTACCTGCCCCTTATTGGGCAAGGTCCCATTCCAGATaGTGTGACCTACAGCTCCAA +
Preference number: 4 (lower is better)
Translates to: QFTSSSLCQVCVPAPYWARSHSR*CDLQLQ
Trigger: TTGGAGCTGTAGGTCACAGCATCTGGAATGGGACCT...TGCCCAATAAGGGGCAGGTACACATACCTGGCAAAGTGATGATGATGTGAATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR GCA 90 bp GGTGGCATGACTCGTAGGCTCAAAGACTCACCACACTTATTGCATCTATTTCTGTTGTGCAGGTTCTGTTaGCAGGGTATCTCCTGGAGA +
Preference number: 4 (lower is better)
Translates to: GGMTRRLKDSPHLLHLFLLCRFC*QGISWR
Trigger: TCTCCAGGAGATACCCTGGCAACAGAACCTGCACAA...CAGAAATAGATGCAATAAGTGTGGTGAGTCTTTGAGCCTACGAGTCATGCCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327245.10
CDS-3UTR GCA 90 bp AAAGAGCAGCATCAGAGTGTTGGCTATAGTTTGGAACTTAGGAACAGGATCAGATGTGAGCTTTCACGGTaGCCCATAGACCTTTGCCGG +
Preference number: 4 (lower is better)
Translates to: KEQHQSVGYSLELRNRIRCELSR*PIDLCR
Trigger: CCGGCAAAGGTCTATGGGGCACCGTGAAAGCTCACA...TCTGATCCTGTTCCTAAGTTCCAAACTATAGCCAACACTCTGATGCTGCTCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR GCA 90 bp ACATCATCATCACTTTGCCAGGTATGTGTACCTGCCCCTTATTGGGCAATCCTCTCCACTGCACACAGATaGATCATCTCTCTCATCCGA +
Preference number: 4 (lower is better)
Translates to: TSSSLCQVCVPAPYWAILSTAHR*IISLIR
Trigger: TCGGATGAGAGAGATGATGCATCTGTGTGCAGTGGA...GAGGATTGCCCAATAAGGGGCAGGTACACATACCTGGCAAAGTGATGATGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR GCA 90 bp GGTGGCATGACTCGTAGGCTCAAAGACTCACCACACTTATTGCATCTATTTCTGTGGAGTCACCTCCACTaGACACAGATGCATCATCTC +
Preference number: 4 (lower is better)
Translates to: GGMTRRLKDSPHLLHLFLWSHLH*TQMHHL
Trigger: GAGATGATGCATCTGTGTGCAGTGGAGGTGACTCCA...CAGAAATAGATGCAATAAGTGTGGTGAGTCTTTGAGCCTACGAGTCATGCCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR GCA 90 bp TTGCTCCAGTTTCCTAGGATTTGGGACTCTGTAAAAATGAGAAAGTCCCAGGCATCGCCAGTCAGTGGGTaGCTCACAACCACAGACATT +
Preference number: 4 (lower is better)
Translates to: LLQFPRIWDSVKMRKSQASPVSG*LTTTDI
Trigger: AATGTCTGTGGTTGTGAGGCACCCACTGACTGGCGA...TGCCTGGGACTTTCTCATTTTTACAGAGTCCCAAATCCTAGGAAACTGGAGCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR GCA 90 bp GGTGGCATGACTCGTAGGCTCAAAGACTCACCACACTTATTGCATCTATTTCTGCAACCTTCTTGGCAATaGATAGTGTGCGCAGGCCAT +
Preference number: 4 (lower is better)
Translates to: GGMTRRLKDSPHLLHLFLQPSWQ*IVCAGH
Trigger: ATGGCCTGCGCACACTATGCATTGCCAAGAAGGTTG...CAGAAATAGATGCAATAAGTGTGGTGAGTCTTTGAGCCTACGAGTCATGCCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR GCA 90 bp AAAGAGCAGCATCAGAGTGTTGGCTATAGTTTGGAACTTAGGAACAGGATCAGAAGTACATCAGGAAGCTaGCGAGGAGCACGACTCCGT +
Preference number: 4 (lower is better)
Translates to: KEQHQSVGYSLELRNRIRSTSGS*RGARLR
Trigger: ACGGAGTCGTGCTCCTCGGCAGCTTCCTGATGTACT...TCTGATCCTGTTCCTAAGTTCCAAACTATAGCCAACACTCTGATGCTGCTCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR GCA 90 bp TCTTTTCCCTGTGAAGTGACACTTGCTCTGACTCTAACTGATGCAGGCCAGTGTACTGACTCTTCCACATaGTTCCTCTTGGGAGGGTTA +
Preference number: 4 (lower is better)
Translates to: SFPCEVTLALTLTDAGQCTDSST*FLLGGL
Trigger: TAACCCTCCCAAGAGGAAGCATGTGGAAGAGTCAGT...ACACTGGCCTGCATCAGTTAGAGTCAGAGCAAGTGTCACTTCACAGGGAAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR GCA 90 bp GCTGGTGGCATGACTCGTAGGCTCAAAGACTCACCACACTTATTGCATCTATTTATGAGTCATCCCTCATaGACTCCGTGCCACATCTCT +
Preference number: 4 (lower is better)
Translates to: AGGMTRRLKDSPHLLHLFMSHPS*TPCHIS
Trigger: AGAGATGTGGCACGGAGTGCATGAGGGATGACTCAT...AAATAGATGCAATAAGTGTGGTGAGTCTTTGAGCCTACGAGTCATGCCACCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR GCA 90 bp TTGCTCCAGTTTCCTAGGATTTGGGACTCTGTAAAAATGAGAAAGTCCCAGGCAAACAGGGGTCTCTGGTaGACCCGTTCCCTTTTGCAT +
Preference number: 4 (lower is better)
Translates to: LLQFPRIWDSVKMRKSQANRGLW*TRSLLH
Trigger: ATGCAAAAGGGAACGGGTGCACCAGAGACCCCTGTT...TGCCTGGGACTTTCTCATTTTTACAGAGTCCCAAATCCTAGGAAACTGGAGCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR GCA 90 bp TCTTTTCCCTGTGAAGTGACACTTGCTCTGACTCTAACTGATGCAGGCCAGTGTTGGGCCTATTCTGGGTaGAGATGTGCTTATATCTCC +
Preference number: 4 (lower is better)
Translates to: SFPCEVTLALTLTDAGQCWAYSG*RCAYIS
Trigger: GGAGATATAAGCACATCTGCACCCAGAATAGGCCCA...ACACTGGCCTGCATCAGTTAGAGTCAGAGCAAGTGTCACTTCACAGGGAAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR GCA 90 bp TTTTACAAGACTAGGGTTAGGCTATACTTGCCCACAGCAGACCTGGCTTCTTTGCTGCTTCAAGCCACCTaGATCCTAGAGAGCAAGGAT +
Preference number: 4 (lower is better)
Translates to: FYKTRVRLYLPTADLASLLLQAT*ILESKD
Trigger: ATCCTTGCTCTCTAGGATGCAGGTGGCTTGAAGCAG...CAAAGAAGCCAGGTCTGCTGTGGGCAAGTATAGCCTAACCCTAGTCTTGTAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp CTGGTGCACCCGTTCCCTTTTGCATGTCTATTCTTCATGCCTCTTACACTAGCTCACGATGATGTCTGTTaGGGTTCTCTTTGTGAGACC +
Preference number: 4 (lower is better)
Translates to: LVHPFPFACLFFMPLTLAHDDVC*GSLCET
Trigger: GGTCTCACAAAGAGAACCCCAACAGACATCATCGTG...AGCTAGTGTAAGAGGCATGAAGAATAGACATGCAAAAGGGAACGGGTGCACCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642502.1
CDS-3UTR CCA 90 bp ACCAACTCGCTGTGCCTGGAAGGGATGTTAACCCCGATTCAGCCATTACTGCAAGAGGAGTATGTCTGCTaGGACAATCTCATTGCATTT +
Preference number: 4 (lower is better)
Translates to: TNSLCLEGMLTPIQPLLQEEYVC*DNLIAF
Trigger: AAATGCAATGAGATTGTCCCAGCAGACATACTCCTC...TTGCAGTAATGGCTGAATCGGGGTTAACATCCCTTCCAGGCACAGCGAGTTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp TGTGGCATTCTGCTTCAAGCCACCTGCATCCTAGAGAGCAAGGATTCAAACTCATCTCTCCATCCAAGCTaGCAGTTTCCAGATGGCATA +
Preference number: 4 (lower is better)
Translates to: CGILLQATCILESKDSNSSLHPS*QFPDGI
Trigger: TATGCCATCTGGAAACTGCCAGCTTGGATGGAGAGA...TGAGTTTGAATCCTTGCTCTCTAGGATGCAGGTGGCTTGAAGCAGAATGCCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp GCTGTGCCTGGAAGGGATGTTAACCCCGATTCAGCCATTACTGCAATACACTTGATTGTGGAAAAGCTCTaGTTCGAACTGTACCTCCTG +
Preference number: 4 (lower is better)
Translates to: AVPGRDVNPDSAITAIHLIVEKL*FELYLL
Trigger: CAGGAGGTACAGTTCGAACCAGAGCTTTTCCACAAT...CAAGTGTATTGCAGTAATGGCTGAATCGGGGTTAACATCCCTTCCAGGCACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp CAATTCACATCATCATCACTTTGCCAGGTATGTGTACCTGCCCCTTATTGGGCACTCCACTCCATTTGGTaGTTTCTGTTAGCGGAGTCC +
Preference number: 4 (lower is better)
Translates to: QFTSSSLCQVCVPAPYWALHSIW*FLLAES
Trigger: GGACTCCGCTAACAGAAACCACCAAATGGAGTGGAG...TGCCCAATAAGGGGCAGGTACACATACCTGGCAAAGTGATGATGATGTGAATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327245.10
CDS-3UTR CCA 90 bp TTTTACAAGACTAGGGTTAGGCTATACTTGCCCACAGCAGACCTGGCTTCTTTGTGCCAGGGTATCTCCTaGAGACCTCTTCCCAATCTT +
Preference number: 4 (lower is better)
Translates to: FYKTRVRLYLPTADLASLCQGIS*RPLPNL
Trigger: AAGATTGGGAAGAGGTCTCCAGGAGATACCCTGGCA...CAAAGAAGCCAGGTCTGCTGTGGGCAAGTATAGCCTAACCCTAGTCTTGTAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327245.10
CDS-3UTR CCA 90 bp TTTCCTTATCTGTGGGGAAATGGGGAGACTAGACCAATAGTAGAATTTGGGAGATGGAGAGGGAAGCCTTaGCAGGTCTGCTGTCTGACA +
Preference number: 4 (lower is better)
Translates to: FPYLWGNGETRPIVEFGRWRGKP*QVCCLT
Trigger: TGTCAGACAGCAGACCTGCCAAGGCTTCCCTCTCCA...TCTCCCAAATTCTACTATTGGTCTAGTCTCCCCATTTCCCCACAGATAAGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520108.1
CDS-3UTR CCA 90 bp GACTTAATACCTATGTCAAGCCTGGGAAGAAAGGCAGTTCTAATCAACTTGCAGTGGAGAGGGAAGCCTTaGCAGGTCTGCTGTCTGACA +
Preference number: 4 (lower is better)
Translates to: DLIPMSSLGRKAVLINLQWRGKP*QVCCLT
Trigger: TGTCAGACAGCAGACCTGCCAAGGCTTCCCTCTCCA...CTGCAAGTTGATTAGAACTGCCTTTCTTCCCAGGCTTGACATAGGTATTAAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp AAAGAGCAGCATCAGAGTGTTGGCTATAGTTTGGAACTTAGGAACAGGATCAGAAGCCACCGTCATCAGTaGAGTCACCTCCACTGCACA +
Preference number: 4 (lower is better)
Translates to: KEQHQSVGYSLELRNRIRSHRHQ*SHLHCT
Trigger: TGTGCAGTGGAGGTGACTCCACTGATGACGGTGGCT...TCTGATCCTGTTCCTAAGTTCCAAACTATAGCCAACACTCTGATGCTGCTCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp AAGAATGGCTTTGGTCTAAACCGATTTGAGAACTCGATTCAACAAAAACAGCCTTCCAGGATGTCGCCCTaGTCCCACATGCTGCTCCTG +
Preference number: 4 (lower is better)
Translates to: KNGFGLNRFENSIQQKQPSRMSP*SHMLLL
Trigger: CAGGAGCAGCATGTGGGACCAGGGCGACATCCTGGA...AGGCTGTTTTTGTTGAATCGAGTTCTCAAATCGGTTTAGACCAAAGCCATTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp GCTGTGCCTGGAAGGGATGTTAACCCCGATTCAGCCATTACTGCAATACACTTGAAGTCTAGATGCTTTTaGGTCCGGGCTCGGATTTTT +
Preference number: 4 (lower is better)
Translates to: AVPGRDVNPDSAITAIHLKSRCF*VRARIF
Trigger: AAAAATCCGAGCCCGGACCCAAAAGCATCTAGACTT...CAAGTGTATTGCAGTAATGGCTGAATCGGGGTTAACATCCCTTCCAGGCACAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp AAGAATGGCTTTGGTCTAAACCGATTTGAGAACTCGATTCAACAAAAACAGCCTCCTCACGCCGGAAACTaGCCCATCTCCGGAAGTCCT +
Preference number: 4 (lower is better)
Translates to: KNGFGLNRFENSIQQKQPPHAGN*PISGSP
Trigger: AGGACTTCCGGAGATGGGCCAGTTTCCGGCGTGAGG...AGGCTGTTTTTGTTGAATCGAGTTCTCAAATCGGTTTAGACCAAAGCCATTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp CTTTTTGCCTACTATATAGGTACTAGCTTAAGGTGGCTCAGTAACCCTTTCTGGCAGCCTCCCGCAGAGTaGCAATCGTATCTGGAACTC +
Preference number: 4 (lower is better)
Translates to: LFAYYIGTSLRWLSNPFWQPPAE*QSYLEL
Trigger: GAGTTCCAGATACGATTGCCACTCTGCGGGAGGCTG...CCAGAAAGGGTTACTGAGCCACCTTAAGCTAGTACCTATATAGTAGGCAAAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp GCTGTGCCTGGAAGGGATGTTAACCCCGATTCAGCCATTACTGCAATACACTTGCAATCATGGTGGAGCTaGAGAAACCACAGAAGAACT +
Preference number: 4 (lower is better)
Translates to: AVPGRDVNPDSAITAIHLQSWWS*RNHRRT
Trigger: AGTTCTTCTGTGGTTTCTCCAGCTCCACCATGATTG...CAAGTGTATTGCAGTAATGGCTGAATCGGGGTTAACATCCCTTCCAGGCACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp TCTTTTCCCTGTGAAGTGACACTTGCTCTGACTCTAACTGATGCAGGCCAGTGTGCCAGTAATCAATCATaGTGGAGCTGGAGAAACCAC +
Preference number: 4 (lower is better)
Translates to: SFPCEVTLALTLTDAGQCASNQS*WSWRNH
Trigger: GTGGTTTCTCCAGCTCCACCATGATTGATTACTGGC...ACACTGGCCTGCATCAGTTAGAGTCAGAGCAAGTGTCACTTCACAGGGAAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp GCTGTGCCTGGAAGGGATGTTAACCCCGATTCAGCCATTACTGCAATACACTTGGGAGATGGTGTTGATTaGTGTCCCAAAGGTAAAGAC +
Preference number: 4 (lower is better)
Translates to: AVPGRDVNPDSAITAIHLGDGVD*CPKGKD
Trigger: GTCTTTACCTTTGGGACACCAATCAACACCATCTCC...CAAGTGTATTGCAGTAATGGCTGAATCGGGGTTAACATCCCTTCCAGGCACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp TTACAGGCAAAAAGCAGAACCAACTCGCTGTGCCTGGAAGGGATGTTAACCCCGCAGGAAAAAGTATCTTaGGAGAAGAGCAACAACTGG +
Preference number: 4 (lower is better)
Translates to: LQAKSRTNSLCLEGMLTPQEKVS*EKSNNW
Trigger: CCAGTTGTTGCTCTTCTCCCAAGATACTTTTTCCTG...CGGGGTTAACATCCCTTCCAGGCACAGCGAGTTGGTTCTGCTTTTTGCCTGTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp ACCAACTCGCTGTGCCTGGAAGGGATGTTAACCCCGATTCAGCCATTACTGCAACAGGAAAAAGTATCTTaGGAGAAGAGCAACAACTGG +
Preference number: 4 (lower is better)
Translates to: TNSLCLEGMLTPIQPLLQQEKVS*EKSNNW
Trigger: CCAGTTGTTGCTCTTCTCCCAAGATACTTTTTCCTG...TTGCAGTAATGGCTGAATCGGGGTTAACATCCCTTCCAGGCACAGCGAGTTGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp AGGCTATACTTGCCCACAGCAGACCTGGCTTCTTTGGACAGCCTATTAAAATTCAAACTAGAGGCCGACTaGGTTTCCCGTCTTTGTGTC +
Preference number: 4 (lower is better)
Translates to: RLYLPTADLASLDSLLKFKLEAD*VSRLCV
Trigger: GACACAAAGACGGGAAACCCAGTCGGCCTCTAGTTT...GAATTTTAATAGGCTGTCCAAAGAAGCCAGGTCTGCTGTGGGCAAGTATAGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp AGGCTATACTTGCCCACAGCAGACCTGGCTTCTTTGGACAGCCTATTAAAATTCGGTTGCCCTATCATATaGGCCTATTCTGGGTGCAGA +
Preference number: 4 (lower is better)
Translates to: RLYLPTADLASLDSLLKFGCPII*AYSGCR
Trigger: TCTGCACCCAGAATAGGCCCATATGATAGGGCAACC...GAATTTTAATAGGCTGTCCAAAGAAGCCAGGTCTGCTGTGGGCAAGTATAGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp TTTTACAAGACTAGGGTTAGGCTATACTTGCCCACAGCAGACCTGGCTTCTTTGGGTTGCCCTATCATATaGGCCTATTCTGGGTGCAGA +
Preference number: 4 (lower is better)
Translates to: FYKTRVRLYLPTADLASLGCPII*AYSGCR
Trigger: TCTGCACCCAGAATAGGCCCATATGATAGGGCAACC...CAAAGAAGCCAGGTCTGCTGTGGGCAAGTATAGCCTAACCCTAGTCTTGTAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp CTGGTGCACCCGTTCCCTTTTGCATGTCTATTCTTCATGCCTCTTACACTAGCTAGCCTATCCCCATTCTaGAATAGGCTGAATGGGGTT +
Preference number: 4 (lower is better)
Translates to: LVHPFPFACLFFMPLTLASLSPF*NRLNGV
Trigger: AACCCCATTCAGCCTATTCCAGAATGGGGATAGGCT...AGCTAGTGTAAGAGGCATGAAGAATAGACATGCAAAAGGGAACGGGTGCACCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp TTTTACAAGACTAGGGTTAGGCTATACTTGCCCACAGCAGACCTGGCTTCTTTGGTACCTGCCCCTTATTaGGCAATCCTCATGCAGGAT +
Preference number: 4 (lower is better)
Translates to: FYKTRVRLYLPTADLASLVPAPY*AILMQD
Trigger: ATCCTGCATGAGGATTGCCCAATAAGGGGCAGGTAC...CAAAGAAGCCAGGTCTGCTGTGGGCAAGTATAGCCTAACCCTAGTCTTGTAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp TCTTTTCCCTGTGAAGTGACACTTGCTCTGACTCTAACTGATGCAGGCCAGTGTTTGGATGGTCACAGTTaGCTTGATTTACAGAGGGGC +
Preference number: 4 (lower is better)
Translates to: SFPCEVTLALTLTDAGQCLDGHS*LDLQRG
Trigger: GCCCCTCTGTAAATCAAGCCAACTGTGACCATCCAA...ACACTGGCCTGCATCAGTTAGAGTCAGAGCAAGTGTCACTTCACAGGGAAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp GCAAGAGACTTAGCCCCAGTAGTCTTCAGTTTCCTTATCTGTGGGGAAATGGGGCAGTTTCCTTATCTGTaGGGAAATGGGGAGACTAGA +
Preference number: 4 (lower is better)
Translates to: ARDLAPVVFSFLICGEMGQFPYL*GNGETR
Trigger: TCTAGTCTCCCCATTTCCCCACAGATAAGGAAACTG...CCCCATTTCCCCACAGATAAGGAAACTGAAGACTACTGGGGCTAAGTCTCTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000520108.1
CDS-3UTR TCA 90 bp AGGCTATACTTGCCCACAGCAGACCTGGCTTCTTTGGACAGCCTATTAAAATTCTTGGGGTTCTCTTTGTaGGACCATCCTTCAAAGAGC +
Preference number: 4 (lower is better)
Translates to: RLYLPTADLASLDSLLKFLGFSL*DHPSKS
Trigger: GCTCTTTGAAGGATGGTCTCACAAAGAGAACCCCAA...GAATTTTAATAGGCTGTCCAAAGAAGCCAGGTCTGCTGTGGGCAAGTATAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642502.1
CDS-3UTR TCA 90 bp GGTGGCATGACTCGTAGGCTCAAAGACTCACCACACTTATTGCATCTATTTCTGTGCATTTCATTTGGATaGAGTCTCCCACGCGCACAT +
Preference number: 4 (lower is better)
Translates to: GGMTRRLKDSPHLLHLFLCISFG*SLPRAH
Trigger: ATGTGCGCGTGGGAGACTTCATCCAAATGAAATGCA...CAGAAATAGATGCAATAAGTGTGGTGAGTCTTTGAGCCTACGAGTCATGCCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR TCA 90 bp TTTCCTTATCTGTGGGGAAATGGGGAGACTAGACCAATAGTAGAATTTGGGAGAAGTCCTCTGCGATGTTaGGGGCTCGACATTGAATGG +
Preference number: 4 (lower is better)
Translates to: FPYLWGNGETRPIVEFGRSPLRC*GLDIEW
Trigger: CCATTCAATGTCGAGCCCTCAACATCGCAGAGGACT...TCTCCCAAATTCTACTATTGGTCTAGTCTCCCCATTTCCCCACAGATAAGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000520108.1
CDS-3UTR TCA 90 bp CTTTTTGCCTACTATATAGGTACTAGCTTAAGGTGGCTCAGTAACCCTTTCTGGAATACTCGCTGCCCATaGTGGTGCAACGTCGGAACA +
Preference number: 4 (lower is better)
Translates to: LFAYYIGTSLRWLSNPFWNTRCP*WCNVGT
Trigger: TGTTCCGACGTTGCACCATCATGGGCAGCGAGTATT...CCAGAAAGGGTTACTGAGCCACCTTAAGCTAGTACCTATATAGTAGGCAAAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR TCA 90 bp TTTTACAAGACTAGGGTTAGGCTATACTTGCCCACAGCAGACCTGGCTTCTTTGGTCACCAGTCGGTTCTaGTTCTCTTGTCAAAGGAAG +
Preference number: 4 (lower is better)
Translates to: FYKTRVRLYLPTADLASLVTSRF*FSCQRK
Trigger: CTTCCTTTGACAAGAGAATCAGAACCGACTGGTGAC...CAAAGAAGCCAGGTCTGCTGTGGGCAAGTATAGCCTAACCCTAGTCTTGTAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327245.10
CDS-3UTR TCA 90 bp GCTGTGCCTGGAAGGGATGTTAACCCCGATTCAGCCATTACTGCAATACACTTGACCTCTTCCCAATCTTaGTGGAATATGCTGTTGTTG +
Preference number: 4 (lower is better)
Translates to: AVPGRDVNPDSAITAIHLTSSQS*WNMLLL
Trigger: CAACAACAGCATATTCCATCAAGATTGGGAAGAGGT...CAAGTGTATTGCAGTAATGGCTGAATCGGGGTTAACATCCCTTCCAGGCACAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327245.10
CDS-3UTR TCA 90 bp ACATCATCATCACTTTGCCAGGTATGTGTACCTGCCCCTTATTGGGCAATCCTCTTAGCATTTTCTTGGTaGGAATACTCGCTGCCCATG +
Preference number: 4 (lower is better)
Translates to: TSSSLCQVCVPAPYWAILLAFSW*EYSLPM
Trigger: CATGGGCAGCGAGTATTCTCACCAAGAAAATGCTAA...GAGGATTGCCCAATAAGGGGCAGGTACACATACCTGGCAAAGTGATGATGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR TCA 90 bp TGTTATAGGGGAATAGTGGTTATAACTTTTCCCTGTAAGATGGCACATTGGATGTCCGGGACACTAGTGTaGAGCTGTAGGCATGGGCAG +
Preference number: 4 (lower is better)
Translates to: CYRGIVVITFPCKMAHWMSGTLV*SCRHGQ
Trigger: CTGCCCATGCCTACAGCTTCACACTAGTGTCCCGGA...CATCCAATGTGCCATCTTACAGGGAAAAGTTATAACCACTATTCCCCTATAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR TCA 90 bp GGTGGCATGACTCGTAGGCTCAAAGACTCACCACACTTATTGCATCTATTTCTGCCAAGTAAGGTGAGTTaGTTCTCCAGATGCTGTGCA +
Preference number: 4 (lower is better)
Translates to: GGMTRRLKDSPHLLHLFLPSKVS*FSRCCA
Trigger: TGCACAGCATCTGGAGAATCAACTCACCTTACTTGG...CAGAAATAGATGCAATAAGTGTGGTGAGTCTTTGAGCCTACGAGTCATGCCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR TCA 90 bp CAATTCACATCATCATCACTTTGCCAGGTATGTGTACCTGCCCCTTATTGGGCAATGTCTTCCCATCGATaGCCAATCCAGCTTCTGGAA +
Preference number: 4 (lower is better)
Translates to: QFTSSSLCQVCVPAPYWAMSSHR*PIQLLE
Trigger: TTCCAGAAGCTGGATTGGTCATCGATGGGAAGACAT...TGCCCAATAAGGGGCAGGTACACATACCTGGCAAAGTGATGATGATGTGAATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR TCA 90 bp TTGCTCCAGTTTCCTAGGATTTGGGACTCTGTAAAAATGAGAAAGTCCCAGGCAACCAGAAGAGCAGGTTaGCGTAGCACACGTTCTTGT +
Preference number: 4 (lower is better)
Translates to: LLQFPRIWDSVKMRKSQATRRAG*RSTRSC
Trigger: ACAAGAACGTGTGCTACGTCAACCTGCTCTTCTGGT...TGCCTGGGACTTTCTCATTTTTACAGAGTCCCAAATCCTAGGAAACTGGAGCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR TCA 90 bp TGTGGCATTCTGCTTCAAGCCACCTGCATCCTAGAGAGCAAGGATTCAAACTCAATCAGTCTGTCCTCTTaGGTAGGCCATTATCCTGTT +
Preference number: 4 (lower is better)
Translates to: CGILLQATCILESKDSNSISLSS*VGHYPV
Trigger: AACAGGATAATGGCCTACTCAAGAGGACAGACTGAT...TGAGTTTGAATCCTTGCTCTCTAGGATGCAGGTGGCTTGAAGCAGAATGCCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR TCA 90 bp CAATTCACATCATCATCACTTTGCCAGGTATGTGTACCTGCCCCTTATTGGGCACTAGGTGGCCTCTGTTaGGTTTGTACAGATTTCTGC +
Preference number: 4 (lower is better)
Translates to: QFTSSSLCQVCVPAPYWALGGLC*VCTDFC
Trigger: GCAGAAATCTGTACAAACTCAACAGAGGCCACCTAG...TGCCCAATAAGGGGCAGGTACACATACCTGGCAAAGTGATGATGATGTGAATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR TCA 90 bp TCTTTTCCCTGTGAAGTGACACTTGCTCTGACTCTAACTGATGCAGGCCAGTGTTGCACAAGTCTCTTCTaGAACTTTAACTCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: SFPCEVTLALTLTDAGQCCTSLF*NFNSGH
Trigger: GTGCCCAGAGTTAAAGTTTCAGAAGAGACTTGTGCA...ACACTGGCCTGCATCAGTTAGAGTCAGAGCAAGTGTCACTTCACAGGGAAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR TCA 90 bp GACTTAATACCTATGTCAAGCCTGGGAAGAAAGGCAGTTCTAATCAACTTGCAGTGCTCTGACTCTAACTaGTGCAGGCCAGTGTCTTCC +
Preference number: 4 (lower is better)
Translates to: DLIPMSSLGRKAVLINLQCSDSN*CRPVSS
Trigger: GGAAGACACTGGCCTGCATCAGTTAGAGTCAGAGCA...CTGCAAGTTGATTAGAACTGCCTTTCTTCCCAGGCTTGACATAGGTATTAAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR TCA 90 bp TCTTTTCCCTGTGAAGTGACACTTGCTCTGACTCTAACTGATGCAGGCCAGTGTATATGGCAGAGGCAGTaGAACAGTGTATTAGCTCCA +
Preference number: 4 (lower is better)
Translates to: SFPCEVTLALTLTDAGQCIWQRQ*NSVLAP
Trigger: TGGAGCTAATACACTGTTTCACTGCCTCTGCCATAT...ACACTGGCCTGCATCAGTTAGAGTCAGAGCAAGTGTCACTTCACAGGGAAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR GCA 90 bp TGTGGCATTCTGCTTCAAGCCACCTGCATCCTAGAGAGCAAGGATTCAAACTCAAAGGAGGAGTATGTCTaGTGGGACAATCTCATTGCA +
Preference number: 4 (lower is better)
Translates to: CGILLQATCILESKDSNSKEEYV*WDNLIA
Trigger: TGCAATGAGATTGTCCCAGCAGACATACTCCTCCTT...TGAGTTTGAATCCTTGCTCTCTAGGATGCAGGTGGCTTGAAGCAGAATGCCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR GCA 90 bp TGTGGCATTCTGCTTCAAGCCACCTGCATCCTAGAGAGCAAGGATTCAAACTCAAGATGTCTATATTCATaGGCCGCTCAATCTTGCTGC +
Preference number: 4 (lower is better)
Translates to: CGILLQATCILESKDSNSRCLYS*AAQSCC
Trigger: GCAGCAAGATTGAGCGGCGCATGAATATAGACATCT...TGAGTTTGAATCCTTGCTCTCTAGGATGCAGGTGGCTTGAAGCAGAATGCCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR GCA 90 bp CTGGTGCACCCGTTCCCTTTTGCATGTCTATTCTTCATGCCTCTTACACTAGCTACAGGTCAAGGTCATTaGTCAAGAAGAACACTTGCC +
Preference number: 4 (lower is better)
Translates to: LVHPFPFACLFFMPLTLATGQGH*SRRTLA
Trigger: GGCAAGTGTTCTTCTTGAGCAATGACCTTGACCTGT...AGCTAGTGTAAGAGGCATGAAGAATAGACATGCAAAAGGGAACGGGTGCACCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR GCA 90 bp TATCTGTGGGGAAATGGGGAGACTAGACCAATAGTAGAATTTGGGAGAGGTAAAAAGCCTTGGCAGGTCTaGTGTCTGACAAGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: YLWGNGETRPIVEFGRGKKPWQV*CLTRSP
Trigger: TGGAGACCTTGTCAGACAGCAGACCTGCCAAGGCTT...TTTACCTCTCCCAAATTCTACTATTGGTCTAGTCTCCCCATTTCCCCACAGATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000520108.1
CDS-3UTR GCA 90 bp AAAGAGCAGCATCAGAGTGTTGGCTATAGTTTGGAACTTAGGAACAGGATCAGAAAGCCTTGGCAGGTCTaGTGTCTGACAAGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: KEQHQSVGYSLELRNRIRKPWQV*CLTRSP
Trigger: TGGAGACCTTGTCAGACAGCAGACCTGCCAAGGCTT...TCTGATCCTGTTCCTAAGTTCCAAACTATAGCCAACACTCTGATGCTGCTCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR GCA 90 bp TTTCCTTATCTGTGGGGAAATGGGGAGACTAGACCAATAGTAGAATTTGGGAGATCGCCAGTCAGTGGGTaGCTCACAACCACAGACATT +
Preference number: 4 (lower is better)
Translates to: FPYLWGNGETRPIVEFGRSPVSG*LTTTDI
Trigger: AATGTCTGTGGTTGTGAGGCACCCACTGACTGGCGA...TCTCCCAAATTCTACTATTGGTCTAGTCTCCCCATTTCCCCACAGATAAGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520108.1
CDS-3UTR GCA 90 bp TTTCCTTATCTGTGGGGAAATGGGGAGACTAGACCAATAGTAGAATTTGGGAGAGCATACAAGTCTAGATaGTTTTGGGTCCGGGCTCGG +
Preference number: 4 (lower is better)
Translates to: FPYLWGNGETRPIVEFGRAYKSR*FWVRAR
Trigger: CCGAGCCCGGACCCAAAAGCATCTAGACTTGTATGC...TCTCCCAAATTCTACTATTGGTCTAGTCTCCCCATTTCCCCACAGATAAGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000520108.1
CDS-3UTR GCA 90 bp CTGGTGCACCCGTTCCCTTTTGCATGTCTATTCTTCATGCCTCTTACACTAGCTGAGGCTCTGGTAGAATaGATCCACCATAGAAATCCA +
Preference number: 4 (lower is better)
Translates to: LVHPFPFACLFFMPLTLAEALVE*IHHRNP
Trigger: TGGATTTCTATGGTGGATGCATTCTACCAGAGCCTC...AGCTAGTGTAAGAGGCATGAAGAATAGACATGCAAAAGGGAACGGGTGCACCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR GCA 90 bp TGTGGCATTCTGCTTCAAGCCACCTGCATCCTAGAGAGCAAGGATTCAAACTCAGAGGCTCTGGTAGAATaGATCCACCATAGAAATCCA +
Preference number: 4 (lower is better)
Translates to: CGILLQATCILESKDSNSEALVE*IHHRNP
Trigger: TGGATTTCTATGGTGGATGCATTCTACCAGAGCCTC...TGAGTTTGAATCCTTGCTCTCTAGGATGCAGGTGGCTTGAAGCAGAATGCCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR GCA 90 bp TCACTTTGCCAGGTATGTGTACCTGCCCCTTATTGGGCAATCCTCATGCAGGATGTTTGTACAGATTTCTaGAGCTCCTCATATGGTCAG +
Preference number: 4 (lower is better)
Translates to: SLCQVCVPAPYWAILMQDVCTDF*SSSYGQ
Trigger: CTGACCATATGAGGAGCTGCAGAAATCTGTACAAAC...ATCCTGCATGAGGATTGCCCAATAAGGGGCAGGTACACATACCTGGCAAAGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR GCA 90 bp GGTGGCATGACTCGTAGGCTCAAAGACTCACCACACTTATTGCATCTATTTCTGGTTTGCAAGATGTGCTaGCTGAGAGCAGCAGAAAAC +
Preference number: 4 (lower is better)
Translates to: GGMTRRLKDSPHLLHLFLVCKMC*LRAAEN
Trigger: GTTTTCTGCTGCTCTCAGGCAGCACATCTTGCAAAC...CAGAAATAGATGCAATAAGTGTGGTGAGTCTTTGAGCCTACGAGTCATGCCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR GCA 90 bp CTGGTGCACCCGTTCCCTTTTGCATGTCTATTCTTCATGCCTCTTACACTAGCTCTTCTCCAAACTGTTTaGAAGATGTGCTGCCTGAGA +
Preference number: 4 (lower is better)
Translates to: LVHPFPFACLFFMPLTLALLQTV*KMCCLR
Trigger: TCTCAGGCAGCACATCTTGCAAACAGTTTGGAGAAG...AGCTAGTGTAAGAGGCATGAAGAATAGACATGCAAAAGGGAACGGGTGCACCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR GCA 90 bp GCTGGTGGCATGACTCGTAGGCTCAAAGACTCACCACACTTATTGCATCTATTTGCACCCGTTCCCTTTTaGATGTCTATTCTTCATGCC +
Preference number: 4 (lower is better)
Translates to: AGGMTRRLKDSPHLLHLFAPVPF*MSILHA
Trigger: GGCATGAAGAATAGACATGCAAAAGGGAACGGGTGC...AAATAGATGCAATAAGTGTGGTGAGTCTTTGAGCCTACGAGTCATGCCACCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR GCA 90 bp GACTTAATACCTATGTCAAGCCTGGGAAGAAAGGCAGTTCTAATCAACTTGCAGCTTCCAGTCCAGGTTTaGCAGGAAGATGGTCAGAGG +
Preference number: 4 (lower is better)
Translates to: DLIPMSSLGRKAVLINLQLPVQV*QEDGQR
Trigger: CCTCTGACCATCTTCCTGGCAAACCTGGACTGGAAG...CTGCAAGTTGATTAGAACTGCCTTTCTTCCCAGGCTTGACATAGGTATTAAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR GCA 90 bp GCTGTGCCTGGAAGGGATGTTAACCCCGATTCAGCCATTACTGCAATACACTTGACCAGTTGTACCAGTTaGTCCAGTTTCCTAGGATTT +
Preference number: 4 (lower is better)
Translates to: AVPGRDVNPDSAITAIHLTSCTS*SSFLGF
Trigger: AAATCCTAGGAAACTGGAGCAACTGGTACAACTGGT...CAAGTGTATTGCAGTAATGGCTGAATCGGGGTTAACATCCCTTCCAGGCACAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR GCA 90 bp TGGGTGCTTCCCTGGTGTACCCAAATCCCACCTAGAAGCCTGTGTCCTCTTGGTCTACACGTTGATATCTaGAGATATCAATACAGAGAA +
Preference number: 4 (lower is better)
Translates to: WVLPWCTQIPPRSLCPLGLHVDI*RYQYRE
Trigger: TTCTCTGTATTGATATCTGCAGATATCAACGTGTAG...ACCAAGAGGACACAGGCTTCTAGGTGGGATTTGGGTACACCAGGGAAGCACCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520108.1
CDS-3UTR CCA 90 bp TCTTTTCCCTGTGAAGTGACACTTGCTCTGACTCTAACTGATGCAGGCCAGTGTGCTCAAAAATGTTTTTaGGGACGAAGGACAACACGG +
Preference number: 4 (lower is better)
Translates to: SFPCEVTLALTLTDAGQCAQKCF*GRRTTR
Trigger: CCGTGTTGTCCTTCGTCCCCAAAAACATTTTTGAGC...ACACTGGCCTGCATCAGTTAGAGTCAGAGCAAGTGTCACTTCACAGGGAAAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000642502.1
CDS-3UTR CCA 90 bp CTGGTGCACCCGTTCCCTTTTGCATGTCTATTCTTCATGCCTCTTACACTAGCTTCATTGCATTTCATTTaGATGAAGTCTCCCACGCGC +
Preference number: 4 (lower is better)
Translates to: LVHPFPFACLFFMPLTLASLHFI*MKSPTR
Trigger: GCGCGTGGGAGACTTCATCCAAATGAAATGCAATGA...AGCTAGTGTAAGAGGCATGAAGAATAGACATGCAAAAGGGAACGGGTGCACCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp CAATTCACATCATCATCACTTTGCCAGGTATGTGTACCTGCCCCTTATTGGGCATCTCTCCATCCAAGCTaGCAGTTTCCAGATGGCATA +
Preference number: 4 (lower is better)
Translates to: QFTSSSLCQVCVPAPYWASLHPS*QFPDGI
Trigger: TATGCCATCTGGAAACTGCCAGCTTGGATGGAGAGA...TGCCCAATAAGGGGCAGGTACACATACCTGGCAAAGTGATGATGATGTGAATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp ACATCATCATCACTTTGCCAGGTATGTGTACCTGCCCCTTATTGGGCAATCCTCCACACGATGGTATTGTaGAAAAGCTCTGGTTCGAAC +
Preference number: 4 (lower is better)
Translates to: TSSSLCQVCVPAPYWAILHTMVL*KSSGSN
Trigger: GTTCGAACCAGAGCTTTTCCACAATACCATCGTGTG...GAGGATTGCCCAATAAGGGGCAGGTACACATACCTGGCAAAGTGATGATGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp AAGAATGGCTTTGGTCTAAACCGATTTGAGAACTCGATTCAACAAAAACAGCCTGCTGCCATTGGCATCTaGCACATCGAAGGGAGGGTG +
Preference number: 4 (lower is better)
Translates to: KNGFGLNRFENSIQQKQPAAIGI*HIEGRV
Trigger: CACCCTCCCTTCGATGTGCCAGATGCCAATGGCAGC...AGGCTGTTTTTGTTGAATCGAGTTCTCAAATCGGTTTAGACCAAAGCCATTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp TTGCTCCAGTTTCCTAGGATTTGGGACTCTGTAAAAATGAGAAAGTCCCAGGCAAAGATGTACTGGATCTaGCCCAAGTCCTCTGCGATG +
Preference number: 4 (lower is better)
Translates to: LLQFPRIWDSVKMRKSQAKMYWI*PKSSAM
Trigger: CATCGCAGAGGACTTGGGCCAGATCCAGTACATCTT...TGCCTGGGACTTTCTCATTTTTACAGAGTCCCAAATCCTAGGAAACTGGAGCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp ACATCATCATCACTTTGCCAGGTATGTGTACCTGCCCCTTATTGGGCAATCCTCGGTAGTTTCTCATCTTaGCAGTGGAGAGGAGTTCAT +
Preference number: 4 (lower is better)
Translates to: TSSSLCQVCVPAPYWAILGSFSS*QWRGVH
Trigger: ATGAACTCCTCTCCACTGCCAAGATGAGAAACTACC...GAGGATTGCCCAATAAGGGGCAGGTACACATACCTGGCAAAGTGATGATGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327245.10
CDS-3UTR CCA 90 bp CAATTCACATCATCATCACTTTGCCAGGTATGTGTACCTGCCCCTTATTGGGCAATGGTGATTTCTCTGTaGAAGACTTCCATGGAGGGC +
Preference number: 4 (lower is better)
Translates to: QFTSSSLCQVCVPAPYWAMVISL*KTSMEG
Trigger: GCCCTCCATGGAAGTCTTCCACAGAGAAATCACCAT...TGCCCAATAAGGGGCAGGTACACATACCTGGCAAAGTGATGATGATGTGAATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327245.10
CDS-3UTR CCA 90 bp CAATTCACATCATCATCACTTTGCCAGGTATGTGTACCTGCCCCTTATTGGGCAGACAGGCATTGGTATTaGGTCCACTCTTCACCATCT +
Preference number: 4 (lower is better)
Translates to: QFTSSSLCQVCVPAPYWADRHWY*VHSSPS
Trigger: AGATGGTGAAGAGTGGACCCAATACCAATGCCTGTC...TGCCCAATAAGGGGCAGGTACACATACCTGGCAAAGTGATGATGATGTGAATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp TATCTGTGGGGAAATGGGGAGACTAGACCAATAGTAGAATTTGGGAGAGGTAAAATAGTTGCTGGATCCTaGGCCCATCTAGCCGAGAAG +
Preference number: 4 (lower is better)
Translates to: YLWGNGETRPIVEFGRGKIVAGS*AHLAEK
Trigger: CTTCTCGGCTAGATGGGCCCAGGATCCAGCAACTAT...TTTACCTCTCCCAAATTCTACTATTGGTCTAGTCTCCCCATTTCCCCACAGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000520108.1
CDS-3UTR CCA 90 bp CAATTCACATCATCATCACTTTGCCAGGTATGTGTACCTGCCCCTTATTGGGCAGTGGATGAGAATGACTaGCTGAGGCTCAATAGCTTC +
Preference number: 4 (lower is better)
Translates to: QFTSSSLCQVCVPAPYWAVDEND*LRLNSF
Trigger: GAAGCTATTGAGCCTCAGCCAGTCATTCTCATCCAC...TGCCCAATAAGGGGCAGGTACACATACCTGGCAAAGTGATGATGATGTGAATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp TGTTATAGGGGAATAGTGGTTATAACTTTTCCCTGTAAGATGGCACATTGGATGTCTCATCCGAGTCTGTaGTGGCCACGTTGGCCCCTA +
Preference number: 4 (lower is better)
Translates to: CYRGIVVITFPCKMAHWMSHPSL*WPRWPL
Trigger: TAGGGGCCAACGTGGCCACCACAGACTCGGATGAGA...CATCCAATGTGCCATCTTACAGGGAAAAGTTATAACCACTATTCCCCTATAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp AAGAATGGCTTTGGTCTAAACCGATTTGAGAACTCGATTCAACAAAAACAGCCTGTCAGGTACGCAGGCTaGGTCTTCCAGCAGGTCCAT +
Preference number: 4 (lower is better)
Translates to: KNGFGLNRFENSIQQKQPVRYAG*VFQQVH
Trigger: ATGGACCTGCTGGAAGACCCAGCCTGCGTACCTGAC...AGGCTGTTTTTGTTGAATCGAGTTCTCAAATCGGTTTAGACCAAAGCCATTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp TTTCTTTGGCTTACAGGCAAAAAGCAGAACCAACTCGCTGTGCCTGGAAGGGATAAGTCTAGATGCTTTTaGGTCCGGGCTCGGATTTTT +
Preference number: 4 (lower is better)
Translates to: FLWLTGKKQNQLAVPGRDKSRCF*VRARIF
Trigger: AAAAATCCGAGCCCGGACCCAAAAGCATCTAGACTT...ATCCCTTCCAGGCACAGCGAGTTGGTTCTGCTTTTTGCCTGTAAGCCAAAGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp ACATCATCATCACTTTGCCAGGTATGTGTACCTGCCCCTTATTGGGCAATCCTCACGGACCGACAATACTaGGTCAATTCCAGAAACTTC +
Preference number: 4 (lower is better)
Translates to: TSSSLCQVCVPAPYWAILTDRQY*VNSRNF
Trigger: GAAGTTTCTGGAATTGACCCAGTATTGTCGGTCCGT...GAGGATTGCCCAATAAGGGGCAGGTACACATACCTGGCAAAGTGATGATGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp AAGAATGGCTTTGGTCTAAACCGATTTGAGAACTCGATTCAACAAAAACAGCCTCATACTCTTCTGGAGTaGCGTGGAGCGGCAGCACAG +
Preference number: 4 (lower is better)
Translates to: KNGFGLNRFENSIQQKQPHTLLE*RGAAAQ
Trigger: CTGTGCTGCCGCTCCACGCCACTCCAGAAGAGTATG...AGGCTGTTTTTGTTGAATCGAGTTCTCAAATCGGTTTAGACCAAAGCCATTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp TGTTATAGGGGAATAGTGGTTATAACTTTTCCCTGTAAGATGGCACATTGGATGAGTACACCACCATCCTaGCCAGGCGCGAGTAACACC +
Preference number: 4 (lower is better)
Translates to: CYRGIVVITFPCKMAHWMSTPPS*PGASNT
Trigger: GGTGTTACTCGCGCCTGGCCAGGATGGTGGTGTACT...CATCCAATGTGCCATCTTACAGGGAAAAGTTATAACCACTATTCCCCTATAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp TCACTTTGCCAGGTATGTGTACCTGCCCCTTATTGGGCAATCCTCATGCAGGATAGTAATCAATCATGGTaGAGCTGGAGAAACCACAGA +
Preference number: 4 (lower is better)
Translates to: SLCQVCVPAPYWAILMQDSNQSW*SWRNHR
Trigger: TCTGTGGTTTCTCCAGCTCCACCATGATTGATTACT...ATCCTGCATGAGGATTGCCCAATAAGGGGCAGGTACACATACCTGGCAAAGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp TTGCTCCAGTTTCCTAGGATTTGGGACTCTGTAAAAATGAGAAAGTCCCAGGCAAGGAGCACGACTCCGTaGAAAATGGTCCATGTCTTC +
Preference number: 4 (lower is better)
Translates to: LLQFPRIWDSVKMRKSQARSTTP*KMVHVF
Trigger: GAAGACATGGACCATTTTCCACGGAGTCGTGCTCCT...TGCCTGGGACTTTCTCATTTTTACAGAGTCCCAAATCCTAGGAAACTGGAGCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp GCTGGTGGCATGACTCGTAGGCTCAAAGACTCACCACACTTATTGCATCTATTTCCACATCTCTGTTCGTaGAGTACTGACTCTTCCACA +
Preference number: 4 (lower is better)
Translates to: AGGMTRRLKDSPHLLHLFPHLCS*STDSST
Trigger: TGTGGAAGAGTCAGTACTCCACGAACAGAGATGTGG...AAATAGATGCAATAAGTGTGGTGAGTCTTTGAGCCTACGAGTCATGCCACCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp AAGAATGGCTTTGGTCTAAACCGATTTGAGAACTCGATTCAACAAAAACAGCCTCTCTGGGATCGGCGATaGCTGCTCCTCTTTGAGCAC +
Preference number: 4 (lower is better)
Translates to: KNGFGLNRFENSIQQKQPLWDRR*LLLFEH
Trigger: GTGCTCAAAGAGGAGCAGCCATCGCCGATCCCAGAG...AGGCTGTTTTTGTTGAATCGAGTTCTCAAATCGGTTTAGACCAAAGCCATTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp GCTGTGCCTGGAAGGGATGTTAACCCCGATTCAGCCATTACTGCAATACACTTGAGAGGGTCAGAAGAATaGCTTTGGTCTAAACCGATT +
Preference number: 4 (lower is better)
Translates to: AVPGRDVNPDSAITAIHLRGSEE*LWSKPI
Trigger: AATCGGTTTAGACCAAAGCCATTCTTCTGACCCTCT...CAAGTGTATTGCAGTAATGGCTGAATCGGGGTTAACATCCCTTCCAGGCACAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp AGGCTATACTTGCCCACAGCAGACCTGGCTTCTTTGGACAGCCTATTAAAATTCGGAAACTTACGGCACTaGGTTGTAGGCTACGCTTAT +
Preference number: 4 (lower is better)
Translates to: RLYLPTADLASLDSLLKFGNLRH*VVGYAY
Trigger: ATAAGCGTAGCCTACAACCCAGTGCCGTAAGTTTCC...GAATTTTAATAGGCTGTCCAAAGAAGCCAGGTCTGCTGTGGGCAAGTATAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp TGTTATAGGGGAATAGTGGTTATAACTTTTCCCTGTAAGATGGCACATTGGATGGGTTTGCCAGGAAGATaGTCAGAGGGCCAGCTCCCT +
Preference number: 4 (lower is better)
Translates to: CYRGIVVITFPCKMAHWMGLPGR*SEGQLP
Trigger: AGGGAGCTGGCCCTCTGACCATCTTCCTGGCAAACC...CATCCAATGTGCCATCTTACAGGGAAAAGTTATAACCACTATTCCCCTATAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp ACCAACTCGCTGTGCCTGGAAGGGATGTTAACCCCGATTCAGCCATTACTGCAAACTCAATCCCCTCACTaGAAACAATTCACATCATCA +
Preference number: 4 (lower is better)
Translates to: TNSLCLEGMLTPIQPLLQTQSPH*KQFTSS
Trigger: TGATGATGTGAATTGTTTCCAGTGAGGGGATTGAGT...TTGCAGTAATGGCTGAATCGGGGTTAACATCCCTTCCAGGCACAGCGAGTTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp TTTTACAAGACTAGGGTTAGGCTATACTTGCCCACAGCAGACCTGGCTTCTTTGTTGGATGGTCACAGTTaGCTTGATTTACAGAGGGGC +
Preference number: 4 (lower is better)
Translates to: FYKTRVRLYLPTADLASLLDGHS*LDLQRG
Trigger: GCCCCTCTGTAAATCAAGCCAACTGTGACCATCCAA...CAAAGAAGCCAGGTCTGCTGTGGGCAAGTATAGCCTAACCCTAGTCTTGTAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR CAA 72 bp TCTGGCTTATTTTACAAGACTAGGGTTAGGCTATACTaGCCCACAGCAGACCTGGCTTCTTTGGACAGCCTA +
Preference number: 4 (lower is better)
Translates to: SGLFYKTRVRLY*PTADLASLDSL
Trigger: TAGGCTGTCCAAAGAAGCCAGGTCTGCTGTGGGCAAGTATAGCCTAACCCTAGTCTTGTAAAATAAGCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR CAA 72 bp TACAGAGGGGCAAGAGTAGGTGACCAGTTGTACCAGTaGCTCCAGTTTCCTAGGATTTGGGACTCTGTAAAA +
Preference number: 4 (lower is better)
Translates to: YRGARVGDQLYQ*LQFPRIWDSVK
Trigger: TTTTACAGAGTCCCAAATCCTAGGAAACTGGAGCAACTGGTACAACTGGTCACCTACTCTTGCCCCTCTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR CAA 72 bp TCCCACCTAGAAGCCTGTGTCCTCTTGGTTGAGGGGTaGCTCTACACGTTGATATCTGCAGATATCAATACA +
Preference number: 4 (lower is better)
Translates to: SHLEACVLLVEG*LYTLISADINT
Trigger: TGTATTGATATCTGCAGATATCAACGTGTAGAGCAACCCCTCAACCAAGAGGACACAGGCTTCTAGGTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520108.1
CDS-3UTR TCA 90 bp CTTTTTGCCTACTATATAGGTACTAGCTTAAGGTGGCTCAGTAACCCTTTCTGGCATGGCCTGCATAGATaGCAATGCCAACAGCCATCT +
Preference number: 4 (lower is better)
Translates to: LFAYYIGTSLRWLSNPFWHGLHR*QCQQPS
Trigger: AGATGGCTGTTGGCATTGTCATCTATGCAGGCCATG...CCAGAAAGGGTTACTGAGCCACCTTAAGCTAGTACCTATATAGTAGGCAAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR TCA 90 bp TCACTTTGCCAGGTATGTGTACCTGCCCCTTATTGGGCAATCCTCATGCAGGATGAGAAGATGACACACTaGAAAGAAATAACTGTGACC +
Preference number: 4 (lower is better)
Translates to: SLCQVCVPAPYWAILMQDEKMTH*KEITVT
Trigger: GGTCACAGTTATTTCTTTTCAGTGTGTCATCTTCTC...ATCCTGCATGAGGATTGCCCAATAAGGGGCAGGTACACATACCTGGCAAAGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327245.10
CDS-3UTR TCA 90 bp ACCAACTCGCTGTGCCTGGAAGGGATGTTAACCCCGATTCAGCCATTACTGCAATTTTCTGATTATATCTaGTTATGTCAAGGCAAGGCC +
Preference number: 4 (lower is better)
Translates to: TNSLCLEGMLTPIQPLLQFSDYI*LCQGKA
Trigger: GGCCTTGCCTTGACATAATCAGATATAATCAGAAAA...TTGCAGTAATGGCTGAATCGGGGTTAACATCCCTTCCAGGCACAGCGAGTTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327245.10
CDS-3UTR TCA 90 bp CTGGTGCACCCGTTCCCTTTTGCATGTCTATTCTTCATGCCTCTTACACTAGCTGAAGAAAACAGTGCTTaGAAGTGGCGGTATTTCTCT +
Preference number: 4 (lower is better)
Translates to: LVHPFPFACLFFMPLTLAEENSA*KWRYFS
Trigger: AGAGAAATACCGCCACTTTCAAGCACTGTTTTCTTC...AGCTAGTGTAAGAGGCATGAAGAATAGACATGCAAAAGGGAACGGGTGCACCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327245.10
CDS-3UTR TCA 90 bp CAATTCACATCATCATCACTTTGCCAGGTATGTGTACCTGCCCCTTATTGGGCATTAGCATTTTCTTGGTaGGAATACTCGCTGCCCATG +
Preference number: 4 (lower is better)
Translates to: QFTSSSLCQVCVPAPYWALAFSW*EYSLPM
Trigger: CATGGGCAGCGAGTATTCTCACCAAGAAAATGCTAA...TGCCCAATAAGGGGCAGGTACACATACCTGGCAAAGTGATGATGATGTGAATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR TCA 90 bp AGGCTATACTTGCCCACAGCAGACCTGGCTTCTTTGGACAGCCTATTAAAATTCATGAGAATGACTGGCTaGGGCTCAATAGCTTCAACT +
Preference number: 4 (lower is better)
Translates to: RLYLPTADLASLDSLLKFMRMTG*GSIAST
Trigger: AGTTGAAGCTATTGAGCCTCAGCCAGTCATTCTCAT...GAATTTTAATAGGCTGTCCAAAGAAGCCAGGTCTGCTGTGGGCAAGTATAGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR TCA 90 bp GACTTAATACCTATGTCAAGCCTGGGAAGAAAGGCAGTTCTAATCAACTTGCAGAGGAATGGGCAATGTTaGCCGCTGTCTCCTGCTTAT +
Preference number: 4 (lower is better)
Translates to: DLIPMSSLGRKAVLINLQRNGQC*PLSPAY
Trigger: ATAAGCAGGAGACAGCGGTCAACATTGCCCATTCCT...CTGCAAGTTGATTAGAACTGCCTTTCTTCCCAGGCTTGACATAGGTATTAAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR TCA 90 bp AAGAATGGCTTTGGTCTAAACCGATTTGAGAACTCGATTCAACAAAAACAGCCTCAAAGTCGCTGGACATaGCAGCCTGCATGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: KNGFGLNRFENSIQQKQPQSRWT*QPACLP
Trigger: AGGAAGGCATGCAGGCTGTCATGTCCAGCGACTTTG...AGGCTGTTTTTGTTGAATCGAGTTCTCAAATCGGTTTAGACCAAAGCCATTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR TCA 90 bp TGTTATAGGGGAATAGTGGTTATAACTTTTCCCTGTAAGATGGCACATTGGATGTGGGGCTGTTGCAGATaGCGCAGGTGGCATTGTACA +
Preference number: 4 (lower is better)
Translates to: CYRGIVVITFPCKMAHWMWGCCR*RRWHCT
Trigger: TGTACAATGCCACCTGCGTCATCTGCAACAGCCCCA...CATCCAATGTGCCATCTTACAGGGAAAAGTTATAACCACTATTCCCCTATAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR TCA 90 bp AAAGAGCAGCATCAGAGTGTTGGCTATAGTTTGGAACTTAGGAACAGGATCAGAGAGCAACAACTGGTGTaGGAAAGCAGACGAGGTAGA +
Preference number: 4 (lower is better)
Translates to: KEQHQSVGYSLELRNRIREQQLV*ESRRGR
Trigger: TCTACCTCGTCTGCTTTCTCACACCAGTTGTTGCTC...TCTGATCCTGTTCCTAAGTTCCAAACTATAGCCAACACTCTGATGCTGCTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR TCA 90 bp GACTTAATACCTATGTCAAGCCTGGGAAGAAAGGCAGTTCTAATCAACTTGCAGGAGCAACAACTGGTGTaGGAAAGCAGACGAGGTAGA +
Preference number: 4 (lower is better)
Translates to: DLIPMSSLGRKAVLINLQEQQLV*ESRRGR
Trigger: TCTACCTCGTCTGCTTTCTCACACCAGTTGTTGCTC...CTGCAAGTTGATTAGAACTGCCTTTCTTCCCAGGCTTGACATAGGTATTAAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR TCA 90 bp CAATTCACATCATCATCACTTTGCCAGGTATGTGTACCTGCCCCTTATTGGGCAACATTGTTTCCTCTATaGAGAAGAAGGGGTCAAGGG +
Preference number: 4 (lower is better)
Translates to: QFTSSSLCQVCVPAPYWATLFPL*RRRGQG
Trigger: CCCTTGACCCCTTCTTCTTCATAGAGGAAACAATGT...TGCCCAATAAGGGGCAGGTACACATACCTGGCAAAGTGATGATGATGTGAATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR TCA 90 bp GGTGGCATGACTCGTAGGCTCAAAGACTCACCACACTTATTGCATCTATTTCTGTTTAACTCTGGGCACTaGGGGGTAAATAAACCCAGA +
Preference number: 4 (lower is better)
Translates to: GGMTRRLKDSPHLLHLFLFNSGH*GVNKPR
Trigger: TCTGGGTTTATTTACCCCTCAGTGCCCAGAGTTAAA...CAGAAATAGATGCAATAAGTGTGGTGAGTCTTTGAGCCTACGAGTCATGCCACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR TCA 90 bp TTTTACAAGACTAGGGTTAGGCTATACTTGCCCACAGCAGACCTGGCTTCTTTGTGCACAAGTCTCTTCTaGAACTTTAACTCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: FYKTRVRLYLPTADLASLCTSLF*NFNSGH
Trigger: GTGCCCAGAGTTAAAGTTTCAGAAGAGACTTGTGCA...CAAAGAAGCCAGGTCTGCTGTGGGCAAGTATAGCCTAACCCTAGTCTTGTAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR TCA 90 bp GCTGGTGGCATGACTCGTAGGCTCAAAGACTCACCACACTTATTGCATCTATTTGCAATACACTTGAGATaGAGCCCTTATGTGCACAAG +
Preference number: 4 (lower is better)
Translates to: AGGMTRRLKDSPHLLHLFAIHLR*SPYVHK
Trigger: CTTGTGCACATAAGGGCTTCATCTCAAGTGTATTGC...AAATAGATGCAATAAGTGTGGTGAGTCTTTGAGCCTACGAGTCATGCCACCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR TCA 90 bp TTACAGGCAAAAAGCAGAACCAACTCGCTGTGCCTGGAAGGGATGTTAACCCCGGTTCTAAGAGCTGAATaGGGATGGGCAATTTTATTT +
Preference number: 4 (lower is better)
Translates to: LQAKSRTNSLCLEGMLTPVLRAE*GWAILF
Trigger: AAATAAAATTGCCCATCCTCATTCAGCTCTTAGAAC...CGGGGTTAACATCCCTTCCAGGCACAGCGAGTTGGTTCTGCTTTTTGCCTGTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR TCA 90 bp TTACAGGCAAAAAGCAGAACCAACTCGCTGTGCCTGGAAGGGATGTTAACCCCGTTTTGTTCTAAGAGCTaGATGAGGATGGGCAATTTT +
Preference number: 4 (lower is better)
Translates to: LQAKSRTNSLCLEGMLTPFCSKS*MRMGNF
Trigger: AAAATTGCCCATCCTCATTCAGCTCTTAGAACAAAA...CGGGGTTAACATCCCTTCCAGGCACAGCGAGTTGGTTCTGCTTTTTGCCTGTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR TCA 90 bp GGTGGCATGACTCGTAGGCTCAAAGACTCACCACACTTATTGCATCTATTTCTGATATGGCAGAGGCAGTaGAACAGTGTATTAGCTCCA +
Preference number: 4 (lower is better)
Translates to: GGMTRRLKDSPHLLHLFLIWQRQ*NSVLAP
Trigger: TGGAGCTAATACACTGTTTCACTGCCTCTGCCATAT...CAGAAATAGATGCAATAAGTGTGGTGAGTCTTTGAGCCTACGAGTCATGCCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR TCA 90 bp CTGGTGCACCCGTTCCCTTTTGCATGTCTATTCTTCATGCCTCTTACACTAGCTCCCTTTTGTTATTACTaGGGGTGTTACAGCTTTCAG +
Preference number: 4 (lower is better)
Translates to: LVHPFPFACLFFMPLTLAPFCYY*GCYSFQ
Trigger: CTGAAAGCTGTAACACCCTCAGTAATAACAAAAGGG...AGCTAGTGTAAGAGGCATGAAGAATAGACATGCAAAAGGGAACGGGTGCACCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR GCA 90 bp ACATCATCATCACTTTGCCAGGTATGTGTACCTGCCCCTTATTGGGCAATCCTCTTCACGACACATCTTTaGTTGAGGTTTGTCTCTCCA +
Preference number: 4 (lower is better)
Translates to: TSSSLCQVCVPAPYWAILFTTHL*LRFVSP
Trigger: TGGAGAGACAAACCTCAAGCAAAGATGTGTCGTGAA...GAGGATTGCCCAATAAGGGGCAGGTACACATACCTGGCAAAGTGATGATGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR GCA 90 bp AGGCTATACTTGCCCACAGCAGACCTGGCTTCTTTGGACAGCCTATTAAAATTCTTTCGTCTCATGGCCTaGATAGATGACAATGCCAAC +
Preference number: 4 (lower is better)
Translates to: RLYLPTADLASLDSLLKFFRLMA*IDDNAN
Trigger: GTTGGCATTGTCATCTATGCAGGCCATGAGACGAAA...GAATTTTAATAGGCTGTCCAAAGAAGCCAGGTCTGCTGTGGGCAAGTATAGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR GCA 90 bp TTTTACAAGACTAGGGTTAGGCTATACTTGCCCACAGCAGACCTGGCTTCTTTGTTTCGTCTCATGGCCTaGATAGATGACAATGCCAAC +
Preference number: 4 (lower is better)
Translates to: FYKTRVRLYLPTADLASLFRLMA*IDDNAN
Trigger: GTTGGCATTGTCATCTATGCAGGCCATGAGACGAAA...CAAAGAAGCCAGGTCTGCTGTGGGCAAGTATAGCCTAACCCTAGTCTTGTAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR GCA 90 bp AAGAATGGCTTTGGTCTAAACCGATTTGAGAACTCGATTCAACAAAAACAGCCTTCTCTGACTCTCCACTaGCACCGATGCCACGATGAG +
Preference number: 4 (lower is better)
Translates to: KNGFGLNRFENSIQQKQPSLTLH*HRCHDE
Trigger: CTCATCGTGGCATCGGTGGCAGTGGAGAGTCAGAGA...AGGCTGTTTTTGTTGAATCGAGTTCTCAAATCGGTTTAGACCAAAGCCATTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327245.10
CDS-3UTR GCA 90 bp GCTGTGCCTGGAAGGGATGTTAACCCCGATTCAGCCATTACTGCAATACACTTGGTTGGAGCAGTTTATTaGTTTATCAAAGCGGTGTCT +
Preference number: 4 (lower is better)
Translates to: AVPGRDVNPDSAITAIHLVGAVY*FIKAVS
Trigger: AGACACCGCTTTGATAAAGCAATAAACTGCTCCAAC...CAAGTGTATTGCAGTAATGGCTGAATCGGGGTTAACATCCCTTCCAGGCACAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327245.10
CDS-3UTR GCA 90 bp TTTTACAAGACTAGGGTTAGGCTATACTTGCCCACAGCAGACCTGGCTTCTTTGATTCTCCAGATGCTGTaGAGTTTCCATGAGAAGCTC +
Preference number: 4 (lower is better)
Translates to: FYKTRVRLYLPTADLASLILQML*SFHEKL
Trigger: GAGCTTCTCATGGAAACTGCACAGCATCTGGAGAAT...CAAAGAAGCCAGGTCTGCTGTGGGCAAGTATAGCCTAACCCTAGTCTTGTAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR GCA 90 bp GCTGGTGGCATGACTCGTAGGCTCAAAGACTCACCACACTTATTGCATCTATTTATTCTCCAGATGCTGTaGAGTTTCCATGAGAAGCTC +
Preference number: 4 (lower is better)
Translates to: AGGMTRRLKDSPHLLHLFILQML*SFHEKL
Trigger: GAGCTTCTCATGGAAACTGCACAGCATCTGGAGAAT...AAATAGATGCAATAAGTGTGGTGAGTCTTTGAGCCTACGAGTCATGCCACCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR GCA 90 bp AAGAATGGCTTTGGTCTAAACCGATTTGAGAACTCGATTCAACAAAAACAGCCTTCTGGAACTCCTTCCTaGAGCCGGTCTTCGATCCCA +
Preference number: 4 (lower is better)
Translates to: KNGFGLNRFENSIQQKQPSGTPS*SRSSIP
Trigger: TGGGATCGAAGACCGGCTGCAGGAAGGAGTTCCAGA...AGGCTGTTTTTGTTGAATCGAGTTCTCAAATCGGTTTAGACCAAAGCCATTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR GCA 90 bp TCACTTTGCCAGGTATGTGTACCTGCCCCTTATTGGGCAATCCTCATGCAGGATCAGCAGCTTGAATCATaGTTACATCATTTGCTCCAT +
Preference number: 4 (lower is better)
Translates to: SLCQVCVPAPYWAILMQDQQLES*LHHLLH
Trigger: ATGGAGCAAATGATGTAAGCATGATTCAAGCTGCTG...ATCCTGCATGAGGATTGCCCAATAAGGGGCAGGTACACATACCTGGCAAAGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR GCA 90 bp CAATTCACATCATCATCACTTTGCCAGGTATGTGTACCTGCCCCTTATTGGGCAAGCAACTTCTTGAGATaGTTAAAGCGGGTGATGGCA +
Preference number: 4 (lower is better)
Translates to: QFTSSSLCQVCVPAPYWASNFLR*LKRVMA
Trigger: TGCCATCACCCGCTTTAAGCATCTCAAGAAGTTGCT...TGCCCAATAAGGGGCAGGTACACATACCTGGCAAAGTGATGATGATGTGAATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR GCA 90 bp AGGCTATACTTGCCCACAGCAGACCTGGCTTCTTTGGACAGCCTATTAAAATTCAGCAACTTCTTGAGATaGTTAAAGCGGGTGATGGCA +
Preference number: 4 (lower is better)
Translates to: RLYLPTADLASLDSLLKFSNFLR*LKRVMA
Trigger: TGCCATCACCCGCTTTAAGCATCTCAAGAAGTTGCT...GAATTTTAATAGGCTGTCCAAAGAAGCCAGGTCTGCTGTGGGCAAGTATAGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR GCA 90 bp AAGAATGGCTTTGGTCTAAACCGATTTGAGAACTCGATTCAACAAAAACAGCCTAGTACATCAGGAAGCTaGCGAGGAGCACGACTCCGT +
Preference number: 4 (lower is better)
Translates to: KNGFGLNRFENSIQQKQPSTSGS*RGARLR
Trigger: ACGGAGTCGTGCTCCTCGGCAGCTTCCTGATGTACT...AGGCTGTTTTTGTTGAATCGAGTTCTCAAATCGGTTTAGACCAAAGCCATTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR GCA 90 bp TTTCTTTGGCTTACAGGCAAAAAGCAGAACCAACTCGCTGTGCCTGGAAGGGATGTTTGTACAGATTTCTaGAGCTCCTCATATGGTCAG +
Preference number: 4 (lower is better)
Translates to: FLWLTGKKQNQLAVPGRDVCTDF*SSSYGQ
Trigger: CTGACCATATGAGGAGCTGCAGAAATCTGTACAAAC...ATCCCTTCCAGGCACAGCGAGTTGGTTCTGCTTTTTGCCTGTAAGCCAAAGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR GCA 90 bp TTGCTCCAGTTTCCTAGGATTTGGGACTCTGTAAAAATGAGAAAGTCCCAGGCATGGGCCTATTCTGGGTaGAGATGTGCTTATATCTCC +
Preference number: 4 (lower is better)
Translates to: LLQFPRIWDSVKMRKSQAWAYSG*RCAYIS
Trigger: GGAGATATAAGCACATCTGCACCCAGAATAGGCCCA...TGCCTGGGACTTTCTCATTTTTACAGAGTCCCAAATCCTAGGAAACTGGAGCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR GCA 90 bp GGTGGCATGACTCGTAGGCTCAAAGACTCACCACACTTATTGCATCTATTTCTGATTGGGCAATCCTCATaGAGGATTCCTCCAAATACC +
Preference number: 4 (lower is better)
Translates to: GGMTRRLKDSPHLLHLFLIGQSS*RIPPNT
Trigger: GGTATTTGGAGGAATCCTGCATGAGGATTGCCCAAT...CAGAAATAGATGCAATAAGTGTGGTGAGTCTTTGAGCCTACGAGTCATGCCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR GCA 90 bp CAATTCACATCATCATCACTTTGCCAGGTATGTGTACCTGCCCCTTATTGGGCAATTGGGCAATCCTCATaGAGGATTCCTCCAAATACC +
Preference number: 4 (lower is better)
Translates to: QFTSSSLCQVCVPAPYWAIGQSS*RIPPNT
Trigger: GGTATTTGGAGGAATCCTGCATGAGGATTGCCCAAT...TGCCCAATAAGGGGCAGGTACACATACCTGGCAAAGTGATGATGATGTGAATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR GCA 90 bp TCTTTTCCCTGTGAAGTGACACTTGCTCTGACTCTAACTGATGCAGGCCAGTGTACCAGTTGTACCAGTTaGTCCAGTTTCCTAGGATTT +
Preference number: 4 (lower is better)
Translates to: SFPCEVTLALTLTDAGQCTSCTS*SSFLGF
Trigger: AAATCCTAGGAAACTGGAGCAACTGGTACAACTGGT...ACACTGGCCTGCATCAGTTAGAGTCAGAGCAAGTGTCACTTCACAGGGAAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp GCTGGTGGCATGACTCGTAGGCTCAAAGACTCACCACACTTATTGCATCTATTTCAGGATAACACAGATTaGTATCATGCTCACCTCAGG +
Preference number: 4 (lower is better)
Translates to: AGGMTRRLKDSPHLLHLFQDNTD*YHAHLR
Trigger: CCTGAGGTGAGCATGATACCAATCTGTGTTATCCTG...AAATAGATGCAATAAGTGTGGTGAGTCTTTGAGCCTACGAGTCATGCCACCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642502.1
CDS-3UTR CCA 90 bp TTACAGGCAAAAAGCAGAACCAACTCGCTGTGCCTGGAAGGGATGTTAACCCCGTTAAATTTGTTGAGGTaGTTGTTGGGTTTCTCACAC +
Preference number: 4 (lower is better)
Translates to: LQAKSRTNSLCLEGMLTPLNLLR*LLGFSH
Trigger: GTGTGAGAAACCCAACAACCACCTCAACAAATTTAA...CGGGGTTAACATCCCTTCCAGGCACAGCGAGTTGGTTCTGCTTTTTGCCTGTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp AAGAATGGCTTTGGTCTAAACCGATTTGAGAACTCGATTCAACAAAAACAGCCTAGCCAAAGCCAGTCCTaGTCTGGTCAGGATGCTCCA +
Preference number: 4 (lower is better)
Translates to: KNGFGLNRFENSIQQKQPSQSQS*SGQDAP
Trigger: TGGAGCATCCTGACCAGACCAGGACTGGCTTTGGCT...AGGCTGTTTTTGTTGAATCGAGTTCTCAAATCGGTTTAGACCAAAGCCATTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp TTTCTTTGGCTTACAGGCAAAAAGCAGAACCAACTCGCTGTGCCTGGAAGGGATTTCTCATCTTGGCAGTaGAGAGGAGTTCATTATCTC +
Preference number: 4 (lower is better)
Translates to: FLWLTGKKQNQLAVPGRDFSSWQ*RGVHYL
Trigger: GAGATAATGAACTCCTCTCCACTGCCAAGATGAGAA...ATCCCTTCCAGGCACAGCGAGTTGGTTCTGCTTTTTGCCTGTAAGCCAAAGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327245.10
CDS-3UTR CCA 90 bp TTTTACAAGACTAGGGTTAGGCTATACTTGCCCACAGCAGACCTGGCTTCTTTGTTTCTCCACTCCATTTaGTGGTTTCTGTTAGCGGAG +
Preference number: 4 (lower is better)
Translates to: FYKTRVRLYLPTADLASLFLHSI*WFLLAE
Trigger: CTCCGCTAACAGAAACCACCAAATGGAGTGGAGAAA...CAAAGAAGCCAGGTCTGCTGTGGGCAAGTATAGCCTAACCCTAGTCTTGTAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327245.10
CDS-3UTR CCA 90 bp GACTTAATACCTATGTCAAGCCTGGGAAGAAAGGCAGTTCTAATCAACTTGCAGGTTTCCGATGGACAATaGGGGAAGCCATCTCTGACT +
Preference number: 4 (lower is better)
Translates to: DLIPMSSLGRKAVLINLQVSDGQ*GKPSLT
Trigger: AGTCAGAGATGGCTTCCCCCATTGTCCATCGGAAAC...CTGCAAGTTGATTAGAACTGCCTTTCTTCCCAGGCTTGACATAGGTATTAAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327245.10
CDS-3UTR CCA 90 bp TTTTACAAGACTAGGGTTAGGCTATACTTGCCCACAGCAGACCTGGCTTCTTTGTGTGGAAGACTTCCATaGAGGGCATCCAGTTCAAAA +
Preference number: 4 (lower is better)
Translates to: FYKTRVRLYLPTADLASLCGRLP*RASSSK
Trigger: TTTTGAACTGGATGCCCTCCATGGAAGTCTTCCACA...CAAAGAAGCCAGGTCTGCTGTGGGCAAGTATAGCCTAACCCTAGTCTTGTAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327245.10
CDS-3UTR CCA 90 bp CTGGTGCACCCGTTCCCTTTTGCATGTCTATTCTTCATGCCTCTTACACTAGCTCAGCATCTCGAACCTTaGTCAGTAGGTTTTTATCTG +
Preference number: 4 (lower is better)
Translates to: LVHPFPFACLFFMPLTLAQHLEP*SVGFYL
Trigger: CAGATAAAAACCTACTGACCAAGGTTCGAGATGCTG...AGCTAGTGTAAGAGGCATGAAGAATAGACATGCAAAAGGGAACGGGTGCACCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp GGTGGCATGACTCGTAGGCTCAAAGACTCACCACACTTATTGCATCTATTTCTGACGGACCGACAATACTaGGTCAATTCCAGAAACTTC +
Preference number: 4 (lower is better)
Translates to: GGMTRRLKDSPHLLHLFLTDRQY*VNSRNF
Trigger: GAAGTTTCTGGAATTGACCCAGTATTGTCGGTCCGT...CAGAAATAGATGCAATAAGTGTGGTGAGTCTTTGAGCCTACGAGTCATGCCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp TGTGGCATTCTGCTTCAAGCCACCTGCATCCTAGAGAGCAAGGATTCAAACTCATTCATTTCCATTGCCTaGTGCAAAAGGATTGTGGTG +
Preference number: 4 (lower is better)
Translates to: CGILLQATCILESKDSNSFISIA*CKRIVV
Trigger: CACCACAATCCTTTTGCACCAGGCAATGGAAATGAA...TGAGTTTGAATCCTTGCTCTCTAGGATGCAGGTGGCTTGAAGCAGAATGCCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp AAAGAGCAGCATCAGAGTGTTGGCTATAGTTTGGAACTTAGGAACAGGATCAGACTGCAGCTCCTCATATaGTCAGTGAACTCTGGGATC +
Preference number: 4 (lower is better)
Translates to: KEQHQSVGYSLELRNRIRLQLLI*SVNSGI
Trigger: GATCCCAGAGTTCACTGACCATATGAGGAGCTGCAG...TCTGATCCTGTTCCTAAGTTCCAAACTATAGCCAACACTCTGATGCTGCTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp CTTTTTGCCTACTATATAGGTACTAGCTTAAGGTGGCTCAGTAACCCTTTCTGGCTGCAGCTCCTCATATaGTCAGTGAACTCTGGGATC +
Preference number: 4 (lower is better)
Translates to: LFAYYIGTSLRWLSNPFWLQLLI*SVNSGI
Trigger: GATCCCAGAGTTCACTGACCATATGAGGAGCTGCAG...CCAGAAAGGGTTACTGAGCCACCTTAAGCTAGTACCTATATAGTAGGCAAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp CTTTTTGCCTACTATATAGGTACTAGCTTAAGGTGGCTCAGTAACCCTTTCTGGGGACCAGTGACTAGGTaGCCTCTGTTGAGTTTGTAC +
Preference number: 4 (lower is better)
Translates to: LFAYYIGTSLRWLSNPFWGPVTR*PLLSLY
Trigger: GTACAAACTCAACAGAGGCCACCTAGTCACTGGTCC...CCAGAAAGGGTTACTGAGCCACCTTAAGCTAGTACCTATATAGTAGGCAAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp TGTGGCATTCTGCTTCAAGCCACCTGCATCCTAGAGAGCAAGGATTCAAACTCAAGAGGGTCAGAAGAATaGCTTTGGTCTAAACCGATT +
Preference number: 4 (lower is better)
Translates to: CGILLQATCILESKDSNSRGSEE*LWSKPI
Trigger: AATCGGTTTAGACCAAAGCCATTCTTCTGACCCTCT...TGAGTTTGAATCCTTGCTCTCTAGGATGCAGGTGGCTTGAAGCAGAATGCCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp CTTTTTGCCTACTATATAGGTACTAGCTTAAGGTGGCTCAGTAACCCTTTCTGGGTACCTGCCCCTTATTaGGCAATCCTCATGCAGGAT +
Preference number: 4 (lower is better)
Translates to: LFAYYIGTSLRWLSNPFWVPAPY*AILMQD
Trigger: ATCCTGCATGAGGATTGCCCAATAAGGGGCAGGTAC...CCAGAAAGGGTTACTGAGCCACCTTAAGCTAGTACCTATATAGTAGGCAAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp ACCAACTCGCTGTGCCTGGAAGGGATGTTAACCCCGATTCAGCCATTACTGCAACAGTTTCCTAGGATTTaGGACTCTGTAAAAATGAGA +
Preference number: 4 (lower is better)
Translates to: TNSLCLEGMLTPIQPLLQQFPRI*DSVKMR
Trigger: TCTCATTTTTACAGAGTCCCAAATCCTAGGAAACTG...TTGCAGTAATGGCTGAATCGGGGTTAACATCCCTTCCAGGCACAGCGAGTTGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp AGGCTATACTTGCCCACAGCAGACCTGGCTTCTTTGGACAGCCTATTAAAATTCTGTAAGATGGCACATTaGATGGTCACAGTTGGCTTG +
Preference number: 4 (lower is better)
Translates to: RLYLPTADLASLDSLLKFCKMAH*MVTVGL
Trigger: CAAGCCAACTGTGACCATCCAATGTGCCATCTTACA...GAATTTTAATAGGCTGTCCAAAGAAGCCAGGTCTGCTGTGGGCAAGTATAGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp AGGCTATACTTGCCCACAGCAGACCTGGCTTCTTTGGACAGCCTATTAAAATTCCTTTTCCCTGTAAGATaGCACATTGGATGGTCACAG +
Preference number: 4 (lower is better)
Translates to: RLYLPTADLASLDSLLKFLFPVR*HIGWSQ
Trigger: CTGTGACCATCCAATGTGCCATCTTACAGGGAAAAG...GAATTTTAATAGGCTGTCCAAAGAAGCCAGGTCTGCTGTGGGCAAGTATAGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR CAA 72 bp ATCCCCTCACTGGAAACAATTCACATCATCATCACTTaGCCAGGTATGTGTACCTGCCCCTTATTGGGCAAT +
Preference number: 4 (lower is better)
Translates to: IPSLETIHIIIT*PGMCTCPLLGN
Trigger: ATTGCCCAATAAGGGGCAGGTACACATACCTGGCAAAGTGATGATGATGTGAATTGTTTCCAGTGAGGGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR TCA 90 bp AAGAATGGCTTTGGTCTAAACCGATTTGAGAACTCGATTCAACAAAAACAGCCTGTAGAAAGTGGGGTTTaGGAGCTGGCCTTCCATCAC +
Preference number: 4 (lower is better)
Translates to: KNGFGLNRFENSIQQKQPVESGV*ELAFHH
Trigger: GTGATGGAAGGCCAGCTCTCAAACCCCACTTTCTAC...AGGCTGTTTTTGTTGAATCGAGTTCTCAAATCGGTTTAGACCAAAGCCATTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR TCA 90 bp TGTTATAGGGGAATAGTGGTTATAACTTTTCCCTGTAAGATGGCACATTGGATGATGGCTGCTCCTCTTTaGGCACCGGCACATATCAGT +
Preference number: 4 (lower is better)
Translates to: CYRGIVVITFPCKMAHWMMAAPL*APAHIS
Trigger: ACTGATATGTGCCGGTGCTCAAAGAGGAGCAGCCAT...CATCCAATGTGCCATCTTACAGGGAAAAGTTATAACCACTATTCCCCTATAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR TCA 90 bp TTGCTCCAGTTTCCTAGGATTTGGGACTCTGTAAAAATGAGAAAGTCCCAGGCAACATTGTTTCCTCTATaGAGAAGAAGGGGTCAAGGG +
Preference number: 4 (lower is better)
Translates to: LLQFPRIWDSVKMRKSQATLFPL*RRRGQG
Trigger: CCCTTGACCCCTTCTTCTTCATAGAGGAAACAATGT...TGCCTGGGACTTTCTCATTTTTACAGAGTCCCAAATCCTAGGAAACTGGAGCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR TCA 90 bp GGTGGCATGACTCGTAGGCTCAAAGACTCACCACACTTATTGCATCTATTTCTGGAAACTTCCATATCCTaGGATATTGCCTGGGTTGAT +
Preference number: 4 (lower is better)
Translates to: GGMTRRLKDSPHLLHLFLETSIS*DIAWVD
Trigger: ATCAACCCAGGCAATATCTCAGGATATGGAAGTTTC...CAGAAATAGATGCAATAAGTGTGGTGAGTCTTTGAGCCTACGAGTCATGCCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR TCA 90 bp AAGAATGGCTTTGGTCTAAACCGATTTGAGAACTCGATTCAACAAAAACAGCCTTGCTCTGACTCTAACTaGTGCAGGCCAGTGTCTTCC +
Preference number: 4 (lower is better)
Translates to: KNGFGLNRFENSIQQKQPCSDSN*CRPVSS
Trigger: GGAAGACACTGGCCTGCATCAGTTAGAGTCAGAGCA...AGGCTGTTTTTGTTGAATCGAGTTCTCAAATCGGTTTAGACCAAAGCCATTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR TCA 90 bp TTTTACAAGACTAGGGTTAGGCTATACTTGCCCACAGCAGACCTGGCTTCTTTGCCCTTTTGTTATTACTaGGGGTGTTACAGCTTTCAG +
Preference number: 4 (lower is better)
Translates to: FYKTRVRLYLPTADLASLPFCYY*GCYSFQ
Trigger: CTGAAAGCTGTAACACCCTCAGTAATAACAAAAGGG...CAAAGAAGCCAGGTCTGCTGTGGGCAAGTATAGCCTAACCCTAGTCTTGTAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR GCA 90 bp TTGCTCCAGTTTCCTAGGATTTGGGACTCTGTAAAAATGAGAAAGTCCCAGGCAACAGGTCAAGGTCATTaGTCAAGAAGAACACTTGCC +
Preference number: 4 (lower is better)
Translates to: LLQFPRIWDSVKMRKSQATGQGH*SRRTLA
Trigger: GGCAAGTGTTCTTCTTGAGCAATGACCTTGACCTGT...TGCCTGGGACTTTCTCATTTTTACAGAGTCCCAAATCCTAGGAAACTGGAGCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR GCA 90 bp TATCTGTGGGGAAATGGGGAGACTAGACCAATAGTAGAATTTGGGAGAGGTAAATCCACTGCACACAGATaGATCATCTCTCTCATCCGA +
Preference number: 4 (lower is better)
Translates to: YLWGNGETRPIVEFGRGKSTAHR*IISLIR
Trigger: TCGGATGAGAGAGATGATGCATCTGTGTGCAGTGGA...TTTACCTCTCCCAAATTCTACTATTGGTCTAGTCTCCCCATTTCCCCACAGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520108.1
CDS-3UTR GCA 90 bp TGTTATAGGGGAATAGTGGTTATAACTTTTCCCTGTAAGATGGCACATTGGATGGCATACAAGTCTAGATaGTTTTGGGTCCGGGCTCGG +
Preference number: 4 (lower is better)
Translates to: CYRGIVVITFPCKMAHWMAYKSR*FWVRAR
Trigger: CCGAGCCCGGACCCAAAAGCATCTAGACTTGTATGC...CATCCAATGTGCCATCTTACAGGGAAAAGTTATAACCACTATTCCCCTATAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR GCA 90 bp AAGAATGGCTTTGGTCTAAACCGATTTGAGAACTCGATTCAACAAAAACAGCCTTTGACCGCTGTCTCCTaGTTATCTCCAGTCAGGACC +
Preference number: 4 (lower is better)
Translates to: KNGFGLNRFENSIQQKQPLTAVS*LSPVRT
Trigger: GGTCCTGACTGGAGATAAGCAGGAGACAGCGGTCAA...AGGCTGTTTTTGTTGAATCGAGTTCTCAAATCGGTTTAGACCAAAGCCATTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR GCA 90 bp TTGCTCCAGTTTCCTAGGATTTGGGACTCTGTAAAAATGAGAAAGTCCCAGGCATGCCAGGAGTGTTTCTaGAGAGATGTCTTTGTCAAG +
Preference number: 4 (lower is better)
Translates to: LLQFPRIWDSVKMRKSQACQECF*RDVFVK
Trigger: CTTGACAAAGACATCTCTGCAGAAACACTCCTGGCA...TGCCTGGGACTTTCTCATTTTTACAGAGTCCCAAATCCTAGGAAACTGGAGCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR GCA 90 bp TTTCTTTGGCTTACAGGCAAAAAGCAGAACCAACTCGCTGTGCCTGGAAGGGATTTCCCACAAGTTCCTTaGAGAGACAGGAAAAAGTAT +
Preference number: 4 (lower is better)
Translates to: FLWLTGKKQNQLAVPGRDFPQVP*RDRKKY
Trigger: ATACTTTTTCCTGTCTCTGCAAGGAACTTGTGGGAA...ATCCCTTCCAGGCACAGCGAGTTGGTTCTGCTTTTTGCCTGTAAGCCAAAGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR GCA 90 bp AAGAATGGCTTTGGTCTAAACCGATTTGAGAACTCGATTCAACAAAAACAGCCTGGGCAGGCCTCTGTCTaGTTCTCCAACTCTGGATTT +
Preference number: 4 (lower is better)
Translates to: KNGFGLNRFENSIQQKQPGQASV*FSNSGF
Trigger: AAATCCAGAGTTGGAGAAGCAGACAGAGGCCTGCCC...AGGCTGTTTTTGTTGAATCGAGTTCTCAAATCGGTTTAGACCAAAGCCATTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR GCA 90 bp AAAGAGCAGCATCAGAGTGTTGGCTATAGTTTGGAACTTAGGAACAGGATCAGAGTTTGCAAGATGTGCTaGCTGAGAGCAGCAGAAAAC +
Preference number: 4 (lower is better)
Translates to: KEQHQSVGYSLELRNRIRVCKMC*LRAAEN
Trigger: GTTTTCTGCTGCTCTCAGGCAGCACATCTTGCAAAC...TCTGATCCTGTTCCTAAGTTCCAAACTATAGCCAACACTCTGATGCTGCTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR GCA 90 bp AAAGAGCAGCATCAGAGTGTTGGCTATAGTTTGGAACTTAGGAACAGGATCAGAACTGTTTGCAAGATGTaGTGCCTGAGAGCAGCAGAA +
Preference number: 4 (lower is better)
Translates to: KEQHQSVGYSLELRNRIRTVCKM*CLRAAE
Trigger: TTCTGCTGCTCTCAGGCAGCACATCTTGCAAACAGT...TCTGATCCTGTTCCTAAGTTCCAAACTATAGCCAACACTCTGATGCTGCTCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR GCA 90 bp ACATCATCATCACTTTGCCAGGTATGTGTACCTGCCCCTTATTGGGCAATCCTCTTCTGGGTGCAGATGTaGTTATATCTCCTGATTTAC +
Preference number: 4 (lower is better)
Translates to: TSSSLCQVCVPAPYWAILFWVQM*LYLLIY
Trigger: GTAAATCAGGAGATATAAGCACATCTGCACCCAGAA...GAGGATTGCCCAATAAGGGGCAGGTACACATACCTGGCAAAGTGATGATGATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR GCA 90 bp TGTTATAGGGGAATAGTGGTTATAACTTTTCCCTGTAAGATGGCACATTGGATGCTTCCAGTCCAGGTTTaGCAGGAAGATGGTCAGAGG +
Preference number: 4 (lower is better)
Translates to: CYRGIVVITFPCKMAHWMLPVQV*QEDGQR
Trigger: CCTCTGACCATCTTCCTGGCAAACCTGGACTGGAAG...CATCCAATGTGCCATCTTACAGGGAAAAGTTATAACCACTATTCCCCTATAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp GCTGGTGGCATGACTCGTAGGCTCAAAGACTCACCACACTTATTGCATCTATTTGAGGAGTATGTCTGCTaGGACAATCTCATTGCATTT +
Preference number: 4 (lower is better)
Translates to: AGGMTRRLKDSPHLLHLFEEYVC*DNLIAF
Trigger: AAATGCAATGAGATTGTCCCAGCAGACATACTCCTC...AAATAGATGCAATAAGTGTGGTGAGTCTTTGAGCCTACGAGTCATGCCACCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp GGTGGCATGACTCGTAGGCTCAAAGACTCACCACACTTATTGCATCTATTTCTGGGGCTCGACATTGAATaGATAAATCGGTCTCTTCAT +
Preference number: 4 (lower is better)
Translates to: GGMTRRLKDSPHLLHLFLGLDIE*INRSLH
Trigger: ATGAAGAGACCGATTTATCCATTCAATGTCGAGCCC...CAGAAATAGATGCAATAAGTGTGGTGAGTCTTTGAGCCTACGAGTCATGCCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp CTTTTTGCCTACTATATAGGTACTAGCTTAAGGTGGCTCAGTAACCCTTTCTGGGAGAAGGACAGGCATTaGTATTGGGTCCACTCTTCA +
Preference number: 4 (lower is better)
Translates to: LFAYYIGTSLRWLSNPFWEKDRH*YWVHSS
Trigger: TGAAGAGTGGACCCAATACCAATGCCTGTCCTTCTC...CCAGAAAGGGTTACTGAGCCACCTTAAGCTAGTACCTATATAGTAGGCAAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp TGTTATAGGGGAATAGTGGTTATAACTTTTCCCTGTAAGATGGCACATTGGATGCCGAGTCAGCACCCTTaGTGTAGACAACAATCTCGC +
Preference number: 4 (lower is better)
Translates to: CYRGIVVITFPCKMAHWMPSQHP*CRQQSR
Trigger: GCGAGATTGTTGTCTACACCAAGGGTGCTGACTCGG...CATCCAATGTGCCATCTTACAGGGAAAAGTTATAACCACTATTCCCCTATAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp TTGCTCCAGTTTCCTAGGATTTGGGACTCTGTAAAAATGAGAAAGTCCCAGGCACAATCATGGTGGAGCTaGAGAAACCACAGAAGAACT +
Preference number: 4 (lower is better)
Translates to: LLQFPRIWDSVKMRKSQAQSWWS*RNHRRT
Trigger: AGTTCTTCTGTGGTTTCTCCAGCTCCACCATGATTG...TGCCTGGGACTTTCTCATTTTTACAGAGTCCCAAATCCTAGGAAACTGGAGCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp GGTGGCATGACTCGTAGGCTCAAAGACTCACCACACTTATTGCATCTATTTCTGTTCATTTCCATTGCCTaGTGCAAAAGGATTGTGGTG +
Preference number: 4 (lower is better)
Translates to: GGMTRRLKDSPHLLHLFLFISIA*CKRIVV
Trigger: CACCACAATCCTTTTGCACCAGGCAATGGAAATGAA...CAGAAATAGATGCAATAAGTGTGGTGAGTCTTTGAGCCTACGAGTCATGCCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp AAAGAGCAGCATCAGAGTGTTGGCTATAGTTTGGAACTTAGGAACAGGATCAGAGAGAAGAGCAACAACTaGTGTGAGAAAGCAGACGAG +
Preference number: 4 (lower is better)
Translates to: KEQHQSVGYSLELRNRIREKSNN*CEKADE
Trigger: CTCGTCTGCTTTCTCACACCAGTTGTTGCTCTTCTC...TCTGATCCTGTTCCTAAGTTCCAAACTATAGCCAACACTCTGATGCTGCTCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp TTTTACAAGACTAGGGTTAGGCTATACTTGCCCACAGCAGACCTGGCTTCTTTGCTGCTTCTCCAACTCTaGATTTCCAGGTTTCTTTTG +
Preference number: 4 (lower is better)
Translates to: FYKTRVRLYLPTADLASLLLLQL*ISRFLL
Trigger: CAAAAGAAACCTGGAAATCCAGAGTTGGAGAAGCAG...CAAAGAAGCCAGGTCTGCTGTGGGCAAGTATAGCCTAACCCTAGTCTTGTAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp CTTTTTGCCTACTATATAGGTACTAGCTTAAGGTGGCTCAGTAACCCTTTCTGGCCAGCACTTCCTCCATaGAAGTCAAGGTTGTTGAAG +
Preference number: 4 (lower is better)
Translates to: LFAYYIGTSLRWLSNPFWPALPP*KSRLLK
Trigger: CTTCAACAACCTTGACTTCCATGGAGGAAGTGCTGG...CCAGAAAGGGTTACTGAGCCACCTTAAGCTAGTACCTATATAGTAGGCAAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp CTTTTTGCCTACTATATAGGTACTAGCTTAAGGTGGCTCAGTAACCCTTTCTGGGGAAACTTACGGCACTaGGTTGTAGGCTACGCTTAT +
Preference number: 4 (lower is better)
Translates to: LFAYYIGTSLRWLSNPFWGNLRH*VVGYAY
Trigger: ATAAGCGTAGCCTACAACCCAGTGCCGTAAGTTTCC...CCAGAAAGGGTTACTGAGCCACCTTAAGCTAGTACCTATATAGTAGGCAAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp GCTGGTGGCATGACTCGTAGGCTCAAAGACTCACCACACTTATTGCATCTATTTACACTTCTTGAATCTTaGAAACTTACGGCACTGGGT +
Preference number: 4 (lower is better)
Translates to: AGGMTRRLKDSPHLLHLFTLLES*KLTALG
Trigger: ACCCAGTGCCGTAAGTTTCCAAGATTCAAGAAGTGT...AAATAGATGCAATAAGTGTGGTGAGTCTTTGAGCCTACGAGTCATGCCACCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp AGGCTATACTTGCCCACAGCAGACCTGGCTTCTTTGGACAGCCTATTAAAATTCACACTTCTTGAATCTTaGAAACTTACGGCACTGGGT +
Preference number: 4 (lower is better)
Translates to: RLYLPTADLASLDSLLKFTLLES*KLTALG
Trigger: ACCCAGTGCCGTAAGTTTCCAAGATTCAAGAAGTGT...GAATTTTAATAGGCTGTCCAAAGAAGCCAGGTCTGCTGTGGGCAAGTATAGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp AAAGAGCAGCATCAGAGTGTTGGCTATAGTTTGGAACTTAGGAACAGGATCAGAAGCCTATCCCCATTCTaGAATAGGCTGAATGGGGTT +
Preference number: 4 (lower is better)
Translates to: KEQHQSVGYSLELRNRIRSLSPF*NRLNGV
Trigger: AACCCCATTCAGCCTATTCCAGAATGGGGATAGGCT...TCTGATCCTGTTCCTAAGTTCCAAACTATAGCCAACACTCTGATGCTGCTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp TGTTATAGGGGAATAGTGGTTATAACTTTTCCCTGTAAGATGGCACATTGGATGTGCCCACAGCAGACCTaGCTTCTTTGGACAGCCTAT +
Preference number: 4 (lower is better)
Translates to: CYRGIVVITFPCKMAHWMCPQQT*LLWTAY
Trigger: ATAGGCTGTCCAAAGAAGCCAGGTCTGCTGTGGGCA...CATCCAATGTGCCATCTTACAGGGAAAAGTTATAACCACTATTCCCCTATAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp TGTGGCATTCTGCTTCAAGCCACCTGCATCCTAGAGAGCAAGGATTCAAACTCAACTCAATCCCCTCACTaGAAACAATTCACATCATCA +
Preference number: 4 (lower is better)
Translates to: CGILLQATCILESKDSNSTQSPH*KQFTSS
Trigger: TGATGATGTGAATTGTTTCCAGTGAGGGGATTGAGT...TGAGTTTGAATCCTTGCTCTCTAGGATGCAGGTGGCTTGAAGCAGAATGCCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR CAA 72 bp TGGGGTTTCAGATTAGTTCTACCCTTGAAGATGTCATaGTTTAAGCTCAGGGTTGCCCTATCATATGGGCCT +
Preference number: 4 (lower is better)
Translates to: WGFRLVLPLKMS*FKLRVALSYGP
Trigger: AGGCCCATATGATAGGGCAACCCTGAGCTTAAACAATGACATCTTCAAGGGTAGAACTAATCTGAAACCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR TCA 90 bp GACTTAATACCTATGTCAAGCCTGGGAAGAAAGGCAGTTCTAATCAACTTGCAGTTGAGGGCTCGACATTaGATGGATAAATCGGTCTCT +
Preference number: 4 (lower is better)
Translates to: DLIPMSSLGRKAVLINLQLRARH*MDKSVS
Trigger: AGAGACCGATTTATCCATTCAATGTCGAGCCCTCAA...CTGCAAGTTGATTAGAACTGCCTTTCTTCCCAGGCTTGACATAGGTATTAAGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR TCA 90 bp CAATTCACATCATCATCACTTTGCCAGGTATGTGTACCTGCCCCTTATTGGGCAAGGTTAGCCCATCTATaGAATTGCTCAAAGAGATTC +
Preference number: 4 (lower is better)
Translates to: QFTSSSLCQVCVPAPYWARLAHL*NCSKRF
Trigger: GAATCTCTTTGAGCAATTTCATAGATGGGCTAACCT...TGCCCAATAAGGGGCAGGTACACATACCTGGCAAAGTGATGATGATGTGAATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327245.10
CDS-3UTR TCA 90 bp TATCTGTGGGGAAATGGGGAGACTAGACCAATAGTAGAATTTGGGAGAGGTAAATTAGCATTTTCTTGGTaGGAATACTCGCTGCCCATG +
Preference number: 4 (lower is better)
Translates to: YLWGNGETRPIVEFGRGKLAFSW*EYSLPM
Trigger: CATGGGCAGCGAGTATTCTCACCAAGAAAATGCTAA...TTTACCTCTCCCAAATTCTACTATTGGTCTAGTCTCCCCATTTCCCCACAGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000520108.1
CDS-3UTR TCA 90 bp CTGGTGCACCCGTTCCCTTTTGCATGTCTATTCTTCATGCCTCTTACACTAGCTCCAATATCAGCAGCTTaGATCATGCTTACATCATTT +
Preference number: 4 (lower is better)
Translates to: LVHPFPFACLFFMPLTLAPISAA*IMLTSF
Trigger: AAATGATGTAAGCATGATTCAAGCTGCTGATATTGG...AGCTAGTGTAAGAGGCATGAAGAATAGACATGCAAAAGGGAACGGGTGCACCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR TCA 90 bp TTTCTTTGGCTTACAGGCAAAAAGCAGAACCAACTCGCTGTGCCTGGAAGGGATTGTCATTTGCCAACTTaGTTGAATGTTTTCTGGCAT +
Preference number: 4 (lower is better)
Translates to: FLWLTGKKQNQLAVPGRDCHLPT*LNVFWH
Trigger: ATGCCAGAAAACATTCAATCAAGTTGGCAAATGACA...ATCCCTTCCAGGCACAGCGAGTTGGTTCTGCTTTTTGCCTGTAAGCCAAAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR TCA 90 bp AAGAATGGCTTTGGTCTAAACCGATTTGAGAACTCGATTCAACAAAAACAGCCTTGGTCACAGTTGGCTTaGTTTACAGAGGGGCAAGAG +
Preference number: 4 (lower is better)
Translates to: KNGFGLNRFENSIQQKQPWSQLA*FTEGQE
Trigger: CTCTTGCCCCTCTGTAAATCAAGCCAACTGTGACCA...AGGCTGTTTTTGTTGAATCGAGTTCTCAAATCGGTTTAGACCAAAGCCATTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR GCA 90 bp AAAGAGCAGCATCAGAGTGTTGGCTATAGTTTGGAACTTAGGAACAGGATCAGAGCAAACCGGTGTAGCTaGTCAAAAATGTTTTTGGGG +
Preference number: 4 (lower is better)
Translates to: KEQHQSVGYSLELRNRIRANRCS*SKMFLG
Trigger: CCCCAAAAACATTTTTGAGCAGCTACACCGGTTTGC...TCTGATCCTGTTCCTAAGTTCCAAACTATAGCCAACACTCTGATGCTGCTCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000642502.1
CDS-3UTR GCA 90 bp AAAGAGCAGCATCAGAGTGTTGGCTATAGTTTGGAACTTAGGAACAGGATCAGAAGATGTCTATATTCATaGGCCGCTCAATCTTGCTGC +
Preference number: 4 (lower is better)
Translates to: KEQHQSVGYSLELRNRIRRCLYS*AAQSCC
Trigger: GCAGCAAGATTGAGCGGCGCATGAATATAGACATCT...TCTGATCCTGTTCCTAAGTTCCAAACTATAGCCAACACTCTGATGCTGCTCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR GCA 90 bp TATCTGTGGGGAAATGGGGAGACTAGACCAATAGTAGAATTTGGGAGAGGTAAAATTCTCCAGATGCTGTaGAGTTTCCATGAGAAGCTC +
Preference number: 4 (lower is better)
Translates to: YLWGNGETRPIVEFGRGKILQML*SFHEKL
Trigger: GAGCTTCTCATGGAAACTGCACAGCATCTGGAGAAT...TTTACCTCTCCCAAATTCTACTATTGGTCTAGTCTCCCCATTTCCCCACAGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000520108.1
CDS-3UTR GCA 90 bp TCTTTTCCCTGTGAAGTGACACTTGCTCTGACTCTAACTGATGCAGGCCAGTGTTGTAGTTCACGAAATTaGTTTAGCTCTTCCAATGCA +
Preference number: 4 (lower is better)
Translates to: SFPCEVTLALTLTDAGQCCSSRN*FSSSNA
Trigger: TGCATTGGAAGAGCTAAAGCAATTTCGTGAACTACA...ACACTGGCCTGCATCAGTTAGAGTCAGAGCAAGTGTCACTTCACAGGGAAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR GCA 90 bp TTTTACAAGACTAGGGTTAGGCTATACTTGCCCACAGCAGACCTGGCTTCTTTGCAGCAGCTTGAATCATaGTTACATCATTTGCTCCAT +
Preference number: 4 (lower is better)
Translates to: FYKTRVRLYLPTADLASLQQLES*LHHLLH
Trigger: ATGGAGCAAATGATGTAAGCATGATTCAAGCTGCTG...CAAAGAAGCCAGGTCTGCTGTGGGCAAGTATAGCCTAACCCTAGTCTTGTAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR GCA 90 bp AAAGAGCAGCATCAGAGTGTTGGCTATAGTTTGGAACTTAGGAACAGGATCAGAATTTCCATTGCCTGGTaGAAAAGGATTGTGGTGAGG +
Preference number: 4 (lower is better)
Translates to: KEQHQSVGYSLELRNRIRISIAW*KRIVVR
Trigger: CCTCACCACAATCCTTTTGCACCAGGCAATGGAAAT...TCTGATCCTGTTCCTAAGTTCCAAACTATAGCCAACACTCTGATGCTGCTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR GCA 90 bp GACTTAATACCTATGTCAAGCCTGGGAAGAAAGGCAGTTCTAATCAACTTGCAGATTTCCATTGCCTGGTaGAAAAGGATTGTGGTGAGG +
Preference number: 4 (lower is better)
Translates to: DLIPMSSLGRKAVLINLQISIAW*KRIVVR
Trigger: CCTCACCACAATCCTTTTGCACCAGGCAATGGAAAT...CTGCAAGTTGATTAGAACTGCCTTTCTTCCCAGGCTTGACATAGGTATTAAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR GCA 90 bp AGGCTATACTTGCCCACAGCAGACCTGGCTTCTTTGGACAGCCTATTAAAATTCTGTCTTCATTTCCATTaGCTGGTGCAAAAGGATTGT +
Preference number: 4 (lower is better)
Translates to: RLYLPTADLASLDSLLKFCLHFH*LVQKDC
Trigger: ACAATCCTTTTGCACCAGGCAATGGAAATGAAGACA...GAATTTTAATAGGCTGTCCAAAGAAGCCAGGTCTGCTGTGGGCAAGTATAGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR GCA 90 bp CAATTCACATCATCATCACTTTGCCAGGTATGTGTACCTGCCCCTTATTGGGCATTCCCACAAGTTCCTTaGAGAGACAGGAAAAAGTAT +
Preference number: 4 (lower is better)
Translates to: QFTSSSLCQVCVPAPYWAFPQVP*RDRKKY
Trigger: ATACTTTTTCCTGTCTCTGCAAGGAACTTGTGGGAA...TGCCCAATAAGGGGCAGGTACACATACCTGGCAAAGTGATGATGATGTGAATTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR GCA 90 bp GGTGGCATGACTCGTAGGCTCAAAGACTCACCACACTTATTGCATCTATTTCTGCGATTCAGCCATTACTaGAATACACTTGAGATGAAG +
Preference number: 4 (lower is better)
Translates to: GGMTRRLKDSPHLLHLFLRFSHY*NTLEMK
Trigger: CTTCATCTCAAGTGTATTGCAGTAATGGCTGAATCG...CAGAAATAGATGCAATAAGTGTGGTGAGTCTTTGAGCCTACGAGTCATGCCACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR GCA 90 bp TGTTATAGGGGAATAGTGGTTATAACTTTTCCCTGTAAGATGGCACATTGGATGCCAGGTATGTGTACCTaGCCCTTATTGGGCAATCCT +
Preference number: 4 (lower is better)
Translates to: CYRGIVVITFPCKMAHWMPGMCT*PLLGNP
Trigger: AGGATTGCCCAATAAGGGGCAGGTACACATACCTGG...CATCCAATGTGCCATCTTACAGGGAAAAGTTATAACCACTATTCCCCTATAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR GCA 90 bp AAAGAGCAGCATCAGAGTGTTGGCTATAGTTTGGAACTTAGGAACAGGATCAGAACATCATCATCACTTTaGCAGGTATGTGTACCTGCC +
Preference number: 4 (lower is better)
Translates to: KEQHQSVGYSLELRNRIRTSSSL*QVCVPA
Trigger: GGCAGGTACACATACCTGGCAAAGTGATGATGATGT...TCTGATCCTGTTCCTAAGTTCCAAACTATAGCCAACACTCTGATGCTGCTCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR GCA 90 bp GACTTAATACCTATGTCAAGCCTGGGAAGAAAGGCAGTTCTAATCAACTTGCAGACATCATCATCACTTTaGCAGGTATGTGTACCTGCC +
Preference number: 4 (lower is better)
Translates to: DLIPMSSLGRKAVLINLQTSSSL*QVCVPA
Trigger: GGCAGGTACACATACCTGGCAAAGTGATGATGATGT...CTGCAAGTTGATTAGAACTGCCTTTCTTCCCAGGCTTGACATAGGTATTAAGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp GACTTAATACCTATGTCAAGCCTGGGAAGAAAGGCAGTTCTAATCAACTTGCAGTCATTGCATTTCATTTaGATGAAGTCTCCCACGCGC +
Preference number: 4 (lower is better)
Translates to: DLIPMSSLGRKAVLINLQSLHFI*MKSPTR
Trigger: GCGCGTGGGAGACTTCATCCAAATGAAATGCAATGA...CTGCAAGTTGATTAGAACTGCCTTTCTTCCCAGGCTTGACATAGGTATTAAGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp AAAGAGCAGCATCAGAGTGTTGGCTATAGTTTGGAACTTAGGAACAGGATCAGAATTGTGGAAAAGCTCTaGTTCGAACTGTACCTCCTG +
Preference number: 4 (lower is better)
Translates to: KEQHQSVGYSLELRNRIRIVEKL*FELYLL
Trigger: CAGGAGGTACAGTTCGAACCAGAGCTTTTCCACAAT...TCTGATCCTGTTCCTAAGTTCCAAACTATAGCCAACACTCTGATGCTGCTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp CTTTTTGCCTACTATATAGGTACTAGCTTAAGGTGGCTCAGTAACCCTTTCTGGCACACGATGGTATTGTaGAAAAGCTCTGGTTCGAAC +
Preference number: 4 (lower is better)
Translates to: LFAYYIGTSLRWLSNPFWHTMVL*KSSGSN
Trigger: GTTCGAACCAGAGCTTTTCCACAATACCATCGTGTG...CCAGAAAGGGTTACTGAGCCACCTTAAGCTAGTACCTATATAGTAGGCAAAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp TTGCTCCAGTTTCCTAGGATTTGGGACTCTGTAAAAATGAGAAAGTCCCAGGCACAGCATCTCGAACCTTaGTCAGTAGGTTTTTATCTG +
Preference number: 4 (lower is better)
Translates to: LLQFPRIWDSVKMRKSQAQHLEP*SVGFYL
Trigger: CAGATAAAAACCTACTGACCAAGGTTCGAGATGCTG...TGCCTGGGACTTTCTCATTTTTACAGAGTCCCAAATCCTAGGAAACTGGAGCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp CTTTTTGCCTACTATATAGGTACTAGCTTAAGGTGGCTCAGTAACCCTTTCTGGGGAGATGGTGTTGATTaGTGTCCCAAAGGTAAAGAC +
Preference number: 4 (lower is better)
Translates to: LFAYYIGTSLRWLSNPFWGDGVD*CPKGKD
Trigger: GTCTTTACCTTTGGGACACCAATCAACACCATCTCC...CCAGAAAGGGTTACTGAGCCACCTTAAGCTAGTACCTATATAGTAGGCAAAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp AGGCTATACTTGCCCACAGCAGACCTGGCTTCTTTGGACAGCCTATTAAAATTCCAGGTTTCTTTTGTCTaGGGGGAGTTTGTCAATTTT +
Preference number: 4 (lower is better)
Translates to: RLYLPTADLASLDSLLKFQVSFV*GEFVNF
Trigger: AAAATTGACAAACTCCCCCCAGACAAAAGAAACCTG...GAATTTTAATAGGCTGTCCAAAGAAGCCAGGTCTGCTGTGGGCAAGTATAGCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp AGGCTATACTTGCCCACAGCAGACCTGGCTTCTTTGGACAGCCTATTAAAATTCCTGTTCTGTTCTTTCTaGCTTTTAGTAGTAGCCAGA +
Preference number: 4 (lower is better)
Translates to: RLYLPTADLASLDSLLKFLFCSF*LLVVAR
Trigger: TCTGGCTACTACTAAAAGCCAGAAAGAACAGAACAG...GAATTTTAATAGGCTGTCCAAAGAAGCCAGGTCTGCTGTGGGCAAGTATAGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp GGTGGCATGACTCGTAGGCTCAAAGACTCACCACACTTATTGCATCTATTTCTGGTGTTGGCTATAGTTTaGAACTTAGGAACAGGATCA +
Preference number: 4 (lower is better)
Translates to: GGMTRRLKDSPHLLHLFLVLAIV*NLGTGS
Trigger: TGATCCTGTTCCTAAGTTCCAAACTATAGCCAACAC...CAGAAATAGATGCAATAAGTGTGGTGAGTCTTTGAGCCTACGAGTCATGCCACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp GACTTAATACCTATGTCAAGCCTGGGAAGAAAGGCAGTTCTAATCAACTTGCAGTGTAAGATGGCACATTaGATGGTCACAGTTGGCTTG +
Preference number: 4 (lower is better)
Translates to: DLIPMSSLGRKAVLINLQCKMAH*MVTVGL
Trigger: CAAGCCAACTGTGACCATCCAATGTGCCATCTTACA...CTGCAAGTTGATTAGAACTGCCTTTCTTCCCAGGCTTGACATAGGTATTAAGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
3UTR CAA 72 bp ACCCAGAAACTTCCATATCCTGAGATATTGCCTGGGTaGATACACTTCTTGAATCTTGGAAACTTACGGCAC +
Preference number: 4 (lower is better)
Translates to: TQKLPYPEILPG*IHFLNLGNLRH
Trigger: GTGCCGTAAGTTTCCAAGATTCAAGAAGTGTATCAACCCAGGCAATATCTCAGGATATGGAAGTTTCTGGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR TCA 90 bp AAAGAGCAGCATCAGAGTGTTGGCTATAGTTTGGAACTTAGGAACAGGATCAGATGTACTTGCTGGTCTTaGTTTGATTCCCACGATGAT +
Preference number: 4 (lower is better)
Translates to: KEQHQSVGYSLELRNRIRCTCWS*FDSHDD
Trigger: ATCATCGTGGGAATCAAATCAAGACCAGCAAGTACA...TCTGATCCTGTTCCTAAGTTCCAAACTATAGCCAACACTCTGATGCTGCTCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642502.1
CDS-3UTR TCA 90 bp AAGAATGGCTTTGGTCTAAACCGATTTGAGAACTCGATTCAACAAAAACAGCCTCGACACATCTTTGCTTaGGGTTTGTCTCTCCATCCA +
Preference number: 4 (lower is better)
Translates to: KNGFGLNRFENSIQQKQPRHIFA*GLSLHP
Trigger: TGGATGGAGAGACAAACCTCAAGCAAAGATGTGTCG...AGGCTGTTTTTGTTGAATCGAGTTCTCAAATCGGTTTAGACCAAAGCCATTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR TCA 90 bp TTGCTCCAGTTTCCTAGGATTTGGGACTCTGTAAAAATGAGAAAGTCCCAGGCATCCTTCCCTCCTTTTTaGAGTCTCAGTGTTTATTGT +
Preference number: 4 (lower is better)
Translates to: LLQFPRIWDSVKMRKSQASFPPF*SLSVYC
Trigger: ACAATAAACACTGAGACTTCAAAAAGGAGGGAAGGA...TGCCTGGGACTTTCTCATTTTTACAGAGTCCCAAATCCTAGGAAACTGGAGCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000327245.10
CDS-3UTR TCA 90 bp GGTGGCATGACTCGTAGGCTCAAAGACTCACCACACTTATTGCATCTATTTCTGGTTCTAAGAGCTGAATaGGGATGGGCAATTTTATTT +
Preference number: 4 (lower is better)
Translates to: GGMTRRLKDSPHLLHLFLVLRAE*GWAILF
Trigger: AAATAAAATTGCCCATCCTCATTCAGCTCTTAGAAC...CAGAAATAGATGCAATAAGTGTGGTGAGTCTTTGAGCCTACGAGTCATGCCACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR GCA 90 bp AAGAATGGCTTTGGTCTAAACCGATTTGAGAACTCGATTCAACAAAAACAGCCTTCCACTGCACACAGATaGATCATCTCTCTCATCCGA +
Preference number: 4 (lower is better)
Translates to: KNGFGLNRFENSIQQKQPSTAHR*IISLIR
Trigger: TCGGATGAGAGAGATGATGCATCTGTGTGCAGTGGA...AGGCTGTTTTTGTTGAATCGAGTTCTCAAATCGGTTTAGACCAAAGCCATTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR GCA 90 bp TTGCTCCAGTTTCCTAGGATTTGGGACTCTGTAAAAATGAGAAAGTCCCAGGCATGTCTTCATTTCCATTaGCTGGTGCAAAAGGATTGT +
Preference number: 4 (lower is better)
Translates to: LLQFPRIWDSVKMRKSQACLHFH*LVQKDC
Trigger: ACAATCCTTTTGCACCAGGCAATGGAAATGAAGACA...TGCCTGGGACTTTCTCATTTTTACAGAGTCCCAAATCCTAGGAAACTGGAGCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp CTTTTTGCCTACTATATAGGTACTAGCTTAAGGTGGCTCAGTAACCCTTTCTGGGGGCTCGACATTGAATaGATAAATCGGTCTCTTCAT +
Preference number: 4 (lower is better)
Translates to: LFAYYIGTSLRWLSNPFWGLDIE*INRSLH
Trigger: ATGAAGAGACCGATTTATCCATTCAATGTCGAGCCC...CCAGAAAGGGTTACTGAGCCACCTTAAGCTAGTACCTATATAGTAGGCAAAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp GACTTAATACCTATGTCAAGCCTGGGAAGAAAGGCAGTTCTAATCAACTTGCAGCATATGGGCCTATTCTaGGTGCAGATGTGCTTATAT +
Preference number: 4 (lower is better)
Translates to: DLIPMSSLGRKAVLINLQHMGLF*VQMCLY
Trigger: ATATAAGCACATCTGCACCCAGAATAGGCCCATATG...CTGCAAGTTGATTAGAACTGCCTTTCTTCCCAGGCTTGACATAGGTATTAAGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp AAAGAGCAGCATCAGAGTGTTGGCTATAGTTTGGAACTTAGGAACAGGATCAGACATATGGGCCTATTCTaGGTGCAGATGTGCTTATAT +
Preference number: 4 (lower is better)
Translates to: KEQHQSVGYSLELRNRIRHMGLF*VQMCLY
Trigger: ATATAAGCACATCTGCACCCAGAATAGGCCCATATG...TCTGATCCTGTTCCTAAGTTCCAAACTATAGCCAACACTCTGATGCTGCTCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp GCTGGTGGCATGACTCGTAGGCTCAAAGACTCACCACACTTATTGCATCTATTTCAGTTTCCTAGGATTTaGGACTCTGTAAAAATGAGA +
Preference number: 4 (lower is better)
Translates to: AGGMTRRLKDSPHLLHLFQFPRI*DSVKMR
Trigger: TCTCATTTTTACAGAGTCCCAAATCCTAGGAAACTG...AAATAGATGCAATAAGTGTGGTGAGTCTTTGAGCCTACGAGTCATGCCACCAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR TCA 90 bp TGTTATAGGGGAATAGTGGTTATAACTTTTCCCTGTAAGATGGCACATTGGATGTTCTGGCATCTTTGCTaGGGAGGTTCTCAAGTGATA +
Preference number: 4 (lower is better)
Translates to: CYRGIVVITFPCKMAHWMFWHLC*GGSQVI
Trigger: TATCACTTGAGAACCTCCTCAGCAAAGATGCCAGAA...CATCCAATGTGCCATCTTACAGGGAAAAGTTATAACCACTATTCCCCTATAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR TCA 90 bp AAGAATGGCTTTGGTCTAAACCGATTTGAGAACTCGATTCAACAAAAACAGCCTTTCTGGCATCTTTGCTaGGGAGGTTCTCAAGTGATA +
Preference number: 4 (lower is better)
Translates to: KNGFGLNRFENSIQQKQPFWHLC*GGSQVI
Trigger: TATCACTTGAGAACCTCCTCAGCAAAGATGCCAGAA...AGGCTGTTTTTGTTGAATCGAGTTCTCAAATCGGTTTAGACCAAAGCCATTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR GCA 90 bp AAAGAGCAGCATCAGAGTGTTGGCTATAGTTTGGAACTTAGGAACAGGATCAGAAATTCAGAACCGCAATaGCCACAAAATAGAGATTGG +
Preference number: 4 (lower is better)
Translates to: KEQHQSVGYSLELRNRIRNSEPQ*PQNRDW
Trigger: CCAATCTCTATTTTGTGGGCATTGCGGTTCTGAATT...TCTGATCCTGTTCCTAAGTTCCAAACTATAGCCAACACTCTGATGCTGCTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642502.1
CDS-3UTR GCA 90 bp GACTTAATACCTATGTCAAGCCTGGGAAGAAAGGCAGTTCTAATCAACTTGCAGAATCTTGATGGAATATaGTGTTGTTGGGGAACACGA +
Preference number: 4 (lower is better)
Translates to: DLIPMSSLGRKAVLINLQNLDGI*CCWGTR
Trigger: TCGTGTTCCCCAACAACAGCATATTCCATCAAGATT...CTGCAAGTTGATTAGAACTGCCTTTCTTCCCAGGCTTGACATAGGTATTAAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327245.10
CDS-3UTR GCA 90 bp GACTTAATACCTATGTCAAGCCTGGGAAGAAAGGCAGTTCTAATCAACTTGCAGTTCTGGGTGCAGATGTaGTTATATCTCCTGATTTAC +
Preference number: 4 (lower is better)
Translates to: DLIPMSSLGRKAVLINLQFWVQM*LYLLIY
Trigger: GTAAATCAGGAGATATAAGCACATCTGCACCCAGAA...CTGCAAGTTGATTAGAACTGCCTTTCTTCCCAGGCTTGACATAGGTATTAAGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp TGTTATAGGGGAATAGTGGTTATAACTTTTCCCTGTAAGATGGCACATTGGATGCCACAAAATAGAGATTaGCAAACCGGTGTAGCTGCT +
Preference number: 4 (lower is better)
Translates to: CYRGIVVITFPCKMAHWMPQNRD*QTGVAA
Trigger: AGCAGCTACACCGGTTTGCCAATCTCTATTTTGTGG...CATCCAATGTGCCATCTTACAGGGAAAAGTTATAACCACTATTCCCCTATAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000642502.1
CDS-3UTR CCA 90 bp AAGAATGGCTTTGGTCTAAACCGATTTGAGAACTCGATTCAACAAAAACAGCCTCGACTCCGTGGAAAATaGTCCATGTCTTCATTTCCA +
Preference number: 4 (lower is better)
Translates to: KNGFGLNRFENSIQQKQPRLRGK*SMSSFP
Trigger: TGGAAATGAAGACATGGACCATTTTCCACGGAGTCG...AGGCTGTTTTTGTTGAATCGAGTTCTCAAATCGGTTTAGACCAAAGCCATTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp AAAGAGCAGCATCAGAGTGTTGGCTATAGTTTGGAACTTAGGAACAGGATCAGACAGGTTTCTTTTGTCTaGGGGGAGTTTGTCAATTTT +
Preference number: 4 (lower is better)
Translates to: KEQHQSVGYSLELRNRIRQVSFV*GEFVNF
Trigger: AAAATTGACAAACTCCCCCCAGACAAAAGAAACCTG...TCTGATCCTGTTCCTAAGTTCCAAACTATAGCCAACACTCTGATGCTGCTCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp AAAGAGCAGCATCAGAGTGTTGGCTATAGTTTGGAACTTAGGAACAGGATCAGACTGTTCTGTTCTTTCTaGCTTTTAGTAGTAGCCAGA +
Preference number: 4 (lower is better)
Translates to: KEQHQSVGYSLELRNRIRLFCSF*LLVVAR
Trigger: TCTGGCTACTACTAAAAGCCAGAAAGAACAGAACAG...TCTGATCCTGTTCCTAAGTTCCAAACTATAGCCAACACTCTGATGCTGCTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR TCA 90 bp AAGAATGGCTTTGGTCTAAACCGATTTGAGAACTCGATTCAACAAAAACAGCCTCACTGTTGCTTTCATTaGAACAAATGTCACCAGTCG +
Preference number: 4 (lower is better)
Translates to: KNGFGLNRFENSIQQKQPHCCFH*NKCHQS
Trigger: CGACTGGTGACATTTGTTTCAATGAAAGCAACAGTG...AGGCTGTTTTTGTTGAATCGAGTTCTCAAATCGGTTTAGACCAAAGCCATTCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327245.10
CDS-3UTR TCA 90 bp TGTTATAGGGGAATAGTGGTTATAACTTTTCCCTGTAAGATGGCACATTGGATGTTACTGCAATACACTTaGGATGAAGCCCTTATGTGC +
Preference number: 4 (lower is better)
Translates to: CYRGIVVITFPCKMAHWMLLQYT*DEALMC
Trigger: GCACATAAGGGCTTCATCTCAAGTGTATTGCAGTAA...CATCCAATGTGCCATCTTACAGGGAAAAGTTATAACCACTATTCCCCTATAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR GCA 90 bp CTTTTTGCCTACTATATAGGTACTAGCTTAAGGTGGCTCAGTAACCCTTTCTGGTGTAGTTCACGAAATTaGTTTAGCTCTTCCAATGCA +
Preference number: 4 (lower is better)
Translates to: LFAYYIGTSLRWLSNPFWCSSRN*FSSSNA
Trigger: TGCATTGGAAGAGCTAAAGCAATTTCGTGAACTACA...CCAGAAAGGGTTACTGAGCCACCTTAAGCTAGTACCTATATAGTAGGCAAAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp TGTTATAGGGGAATAGTGGTTATAACTTTTCCCTGTAAGATGGCACATTGGATGAGTAATCAATCATGGTaGAGCTGGAGAAACCACAGA +
Preference number: 4 (lower is better)
Translates to: CYRGIVVITFPCKMAHWMSNQSW*SWRNHR
Trigger: TCTGTGGTTTCTCCAGCTCCACCATGATTGATTACT...CATCCAATGTGCCATCTTACAGGGAAAAGTTATAACCACTATTCCCCTATAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp AAGAATGGCTTTGGTCTAAACCGATTTGAGAACTCGATTCAACAAAAACAGCCTGTGTTGGCTATAGTTTaGAACTTAGGAACAGGATCA +
Preference number: 4 (lower is better)
Translates to: KNGFGLNRFENSIQQKQPVLAIV*NLGTGS
Trigger: TGATCCTGTTCCTAAGTTCCAAACTATAGCCAACAC...AGGCTGTTTTTGTTGAATCGAGTTCTCAAATCGGTTTAGACCAAAGCCATTCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR TCA 90 bp AAGAATGGCTTTGGTCTAAACCGATTTGAGAACTCGATTCAACAAAAACAGCCTCCAATATCAGCAGCTTaGATCATGCTTACATCATTT +
Preference number: 4 (lower is better)
Translates to: KNGFGLNRFENSIQQKQPPISAA*IMLTSF
Trigger: AAATGATGTAAGCATGATTCAAGCTGCTGATATTGG...AGGCTGTTTTTGTTGAATCGAGTTCTCAAATCGGTTTAGACCAAAGCCATTCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR TCA 90 bp AAGAATGGCTTTGGTCTAAACCGATTTGAGAACTCGATTCAACAAAAACAGCCTTGGTCTAAACCGATTTaGGAACTCGATTCAACAAAA +
Preference number: 4 (lower is better)
Translates to: KNGFGLNRFENSIQQKQPWSKPI*ELDSTK
Trigger: TTTTGTTGAATCGAGTTCTCAAATCGGTTTAGACCA...AGGCTGTTTTTGTTGAATCGAGTTCTCAAATCGGTTTAGACCAAAGCCATTCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR TCA 90 bp TGTTATAGGGGAATAGTGGTTATAACTTTTCCCTGTAAGATGGCACATTGGATGTGTCATTTGCCAACTTaGTTGAATGTTTTCTGGCAT +
Preference number: 4 (lower is better)
Translates to: CYRGIVVITFPCKMAHWMCHLPT*LNVFWH
Trigger: ATGCCAGAAAACATTCAATCAAGTTGGCAAATGACA...CATCCAATGTGCCATCTTACAGGGAAAAGTTATAACCACTATTCCCCTATAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CCA 90 bp TGTTATAGGGGAATAGTGGTTATAACTTTTCCCTGTAAGATGGCACATTGGATGTTAAATTTGTTGAGGTaGTTGTTGGGTTTCTCACAC +
Preference number: 4 (lower is better)
Translates to: CYRGIVVITFPCKMAHWMLNLLR*LLGFSH
Trigger: GTGTGAGAAACCCAACAACCACCTCAACAAATTTAA...CATCCAATGTGCCATCTTACAGGGAAAAGTTATAACCACTATTCCCCTATAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS TCA 90 bp TGGCCCTGGATGGGCACCCGGGCACTCTGGCTCCTCCTCAGAGGCTaGGCACCTTTTTGGCTTCTCATAGTTGCTGGATCCTGGGCCCAT +
Preference number: 5 (lower is better)
Translates to: WPWMGTRALWLLLRG*APFWLLIVAGSWAH
Trigger: ATGGGCCCAGGATCCAGCAACTATGAGAAGCCAAAAAGGTGCTCAGCCTCTGAGGAGGAGCCAGAGTGCCCGGGTGCCCATCCAGGGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327245.10
ENST00000520108.1
ENST00000642502.1
CDS GCA 90 bp AGGAAGTGCCTGACCCAGACTCCAGGATGTCGCCCTGGTCCCACATaGTGCTCCTGTAGCCACCGTCATCAGTGGAGTCACCTCCACTGC +
Preference number: 5 (lower is better)
Translates to: RKCLTQTPGCRPGPT*CSCSHRHQWSHLHC
Trigger: GCAGTGGAGGTGACTCCACTGATGACGGTGGCTACAGGAGCAGCATGTGGGACCAGGGCGACATCCTGGAGTCTGGGTCAGGCACTTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327245.10
ENST00000520108.1
ENST00000642502.1
CDS TCA 90 bp GTGCTGGCACTGAAGTCCTGTCCTGTGATAGATGACACTGGGTGGTaGGTTGGTCGAGCCACTTCGGGGACAGGGGCAGGCCTCTGTCTG +
Preference number: 5 (lower is better)
Translates to: VLALKSCPVIDDTGW*VGRATSGTGAGLCL
Trigger: CAGACAGAGGCCTGCCCCTGTCCCCGAAGTGGCTCGACCAACTCACCACCCAGTGTCATCTATCACAGGACAGGACTTCAGTGCCAGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp GTTGGGTGCTTCCCTGGTGTACCCAAATCCCACCTAGAAGCCTGTGTCCTCTTGTCTGTGGTGGCCACGTaGGCCCCTAAGCTCTCCCCG +
Preference number: 5 (lower is better)
Translates to: VGCFPGVPKSHLEACVLLSVVAT*APKLSP
Trigger: CGGGGAGAGCTTAGGGGCCAACGTGGCCACCACAGA...CAAGAGGACACAGGCTTCTAGGTGGGATTTGGGTACACCAGGGAAGCACCCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520108.1
CDS GCA 90 bp GATGGACAATGGGGGAAGCCATCTCTGACTCTCCACTGCCACCGATaGCACGATGAGTCCACTGAGAGGGCCATTTCCAGCAGCAGGCGA +
Preference number: 5 (lower is better)
Translates to: DGQWGKPSLTLHCHR*HDESTERAISSSRR
Trigger: TCGCCTGCTGCTGGAAATGGCCCTCTCAGTGGACTCATCGTGGCATCGGTGGCAGTGGAGAGTCAGAGATGGCTTCCCCCATTGTCCATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000327245.10
ENST00000517802.5
ENST00000518411.5
ENST00000520098.5
ENST00000521033.5
CDS GCA 90 bp CCTGTAGCCACCGTCATCAGTGGAGTCACCTCCACTGCACACAGATaGATCATCTCTCTCATCCGAGTCTGTGGTGGCCACGTTGGCCCC +
Preference number: 5 (lower is better)
Translates to: PVATVISGVTSTAHR*IISLIRVCGGHVGP
Trigger: GGGGCCAACGTGGCCACCACAGACTCGGATGAGAGAGATGATGCATCTGTGTGCAGTGGAGGTGACTCCACTGATGACGGTGGCTACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327245.10
ENST00000520108.1
ENST00000642502.1
CDS CCA 90 bp CTCCACTGCACACAGATGCATCATCTCTCTCATCCGAGTCTGTGGTaGCCACGTTGGCCCCTAAGCTCTCCCCGAGGTCTGTGTCAGAGG +
Preference number: 5 (lower is better)
Translates to: LHCTQMHHLSHPSLW*PRWPLSSPRGLCQR
Trigger: CCTCTGACACAGACCTCGGGGAGAGCTTAGGGGCCAACGTGGCCACCACAGACTCGGATGAGAGAGATGATGCATCTGTGTGCAGTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327245.10
ENST00000520108.1
ENST00000642502.1
CDS CCA 90 bp CACCTCCACTGCACACAGATGCATCATCTCTCTCATCCGAGTCTGTaGTGGCCACGTTGGCCCCTAAGCTCTCCCCGAGGTCTGTGTCAG +
Preference number: 5 (lower is better)
Translates to: HLHCTQMHHLSHPSL*WPRWPLSSPRGLCQ
Trigger: CTGACACAGACCTCGGGGAGAGCTTAGGGGCCAACGTGGCCACCACAGACTCGGATGAGAGAGATGATGCATCTGTGTGCAGTGGAGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327245.10
ENST00000520108.1
ENST00000642502.1
CDS-3UTR CAA 90 bp GGGGGTTGGGTGCTTCCCTGGTGTACCCAAATCCCACCTAGAAGCCTGTGTCCTCGTCGGAACACCATCTaGTTCTCTGTCAGGGTCCCC +
Preference number: 5 (lower is better)
Translates to: GGWVLPWCTQIPPRSLCPRRNTI*FSVRVP
Trigger: GGGGACCCTGACAGAGAACAAGATGGTGTTCCGACG...AGGACACAGGCTTCTAGGTGGGATTTGGGTACACCAGGGAAGCACCCAACCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520108.1
CDS GCA 90 bp GTGGTTTCCGATGGACAATGGGGGAAGCCATCTCTGACTCTCCACTaGCACCGATGCCACGATGAGTCCACTGAGAGGGCCATTTCCAGC +
Preference number: 5 (lower is better)
Translates to: VVSDGQWGKPSLTLH*HRCHDESTERAISS
Trigger: GCTGGAAATGGCCCTCTCAGTGGACTCATCGTGGCATCGGTGGCAGTGGAGAGTCAGAGATGGCTTCCCCCATTGTCCATCGGAAACCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000327245.10
ENST00000517802.5
ENST00000518411.5
ENST00000520098.5
ENST00000521033.5
CDS CCA 90 bp CTCCCTTTCTCTGGAGAGAGCAGCGGTGTGGTTTCCGATGGACAATaGGGGAAGCCATCTCTGACTCTCCACTGCCACCGATGCCACGAT +
Preference number: 5 (lower is better)
Translates to: LPFSGESSGVVSDGQ*GKPSLTLHCHRCHD
Trigger: ATCGTGGCATCGGTGGCAGTGGAGAGTCAGAGATGGCTTCCCCCATTGTCCATCGGAAACCACACCGCTGCTCTCTCCAGAGAAAGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327245.10
ENST00000517802.5
ENST00000518411.5
ENST00000520098.5
ENST00000521033.5
CDS CCA 90 bp GCTCTGTCTCCCTTTCTCTGGAGAGAGCAGCGGTGTGGTTTCCGATaGACAATGGGGGAAGCCATCTCTGACTCTCCACTGCCACCGATG +
Preference number: 5 (lower is better)
Translates to: ALSPFLWREQRCGFR*TMGEAISDSPLPPM
Trigger: CATCGGTGGCAGTGGAGAGTCAGAGATGGCTTCCCCCATTGTCCATCGGAAACCACACCGCTGCTCTCTCCAGAGAAAGGGAGACAGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000327245.10
ENST00000517802.5
ENST00000518411.5
ENST00000520098.5
ENST00000521033.5
CDS CCA 90 bp CACGACCCGCTGCTGTGTCAAGTTGTAGCTCTGTCTCCCTTTCTCTaGAGAGAGCAGCGGTGTGGTTTCCGATGGACAATGGGGGAAGCC +
Preference number: 5 (lower is better)
Translates to: HDPLLCQVVALSPFL*REQRCGFRWTMGEA
Trigger: GGCTTCCCCCATTGTCCATCGGAAACCACACCGCTGCTCTCTCCAGAGAAAGGGAGACAGAGCTACAACTTGACACAGCAGCGGGTCGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000327245.10
ENST00000517802.5
ENST00000518411.5
ENST00000520098.5
ENST00000521033.5
CDS CCA 90 bp GCTGGATCCTGGGCCCATCTAGCCGAGAAGGACAGGCATTGGTATTaGGTCCACTCTTCACCATCTGAGTCCAGCTCCTTTGGGGTCTCC +
Preference number: 5 (lower is better)
Translates to: AGSWAHLAEKDRHWY*VHSSPSESSSFGVS
Trigger: GGAGACCCCAAAGGAGCTGGACTCAGATGGTGAAGAGTGGACCCAATACCAATGCCTGTCCTTCTCGGCTAGATGGGCCCAGGATCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327245.10
ENST00000520108.1
ENST00000642502.1
CDS CCA 90 bp GCTCATCTCGGTTGTCGAGGGATGCCTCAGCCTCACGCCGGAAACTaGCCCATCTCCGGAAGTCCTCTTCGCTTACAACCTTCTTGGCAA +
Preference number: 5 (lower is better)
Translates to: AHLGCRGMPQPHAGN*PISGSPLRLQPSWQ
Trigger: TTGCCAAGAAGGTTGTAAGCGAAGAGGACTTCCGGAGATGGGCCAGTTTCCGGCGTGAGGCTGAGGCATCCCTCGACAACCGAGATGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327245.10
ENST00000520108.1
ENST00000642502.1
CDS-3UTR CAA 90 bp GGGTCCTCTAGACTCCAAGATTCAGTGATCTGTTGGGGGTTGGGTGCTTCCCTGGTGCCCCATAGACCTTaGCCGGTAGTGGCCCTGGAT +
Preference number: 5 (lower is better)
Translates to: GSSRLQDSVICWGLGASLVPHRP*PVVALD
Trigger: ATCCAGGGCCACTACCGGCAAAGGTCTATGGGGCAC...CAGGGAAGCACCCAACCCCCAACAGATCACTGAATCTTGGAGTCTAGAGGACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520108.1
CDS-3UTR CAA 90 bp GTTGGGTGCTTCCCTGGTGTACCCAAATCCCACCTAGAAGCCTGTGTCCTCTTGGCCTTGCTTGAGGGTTaGATGGTGACCCTCTGCCTG +
Preference number: 5 (lower is better)
Translates to: VGCFPGVPKSHLEACVLLALLEG*MVTLCL
Trigger: CAGGCAGAGGGTCACCATCAAACCCTCAAGCAAGGC...CAAGAGGACACAGGCTTCTAGGTGGGATTTGGGTACACCAGGGAAGCACCCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520108.1
CDS-3UTR CAA 90 bp GTTGGGTGCTTCCCTGGTGTACCCAAATCCCACCTAGAAGCCTGTGTCCTCTTGGTGATCTGTTGGGGGTaGGGTGCTTCCCTGGTGTAC +
Preference number: 5 (lower is better)
Translates to: VGCFPGVPKSHLEACVLLVICWG*GASLVY
Trigger: GTACACCAGGGAAGCACCCAACCCCCAACAGATCAC...CAAGAGGACACAGGCTTCTAGGTGGGATTTGGGTACACCAGGGAAGCACCCAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520108.1
CDS GCA 90 bp ACATGCTGCTCCTGTAGCCACCGTCATCAGTGGAGTCACCTCCACTaGACACAGATGCATCATCTCTCTCATCCGAGTCTGTGGTGGCCA +
Preference number: 5 (lower is better)
Translates to: TCCSCSHRHQWSHLH*TQMHHLSHPSLWWP
Trigger: TGGCCACCACAGACTCGGATGAGAGAGATGATGCATCTGTGTGCAGTGGAGGTGACTCCACTGATGACGGTGGCTACAGGAGCAGCATGT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327245.10
ENST00000520108.1
ENST00000642502.1
CDS GCA 90 bp CACTCCGTGCCACATCTCTGTTCGTGGAGTACTGACTCTTCCACATaGTTCCTCTTGGGAGGGTTAGAGCTCTTTGGGGTGCTGGCACTG +
Preference number: 5 (lower is better)
Translates to: HSVPHLCSWSTDSST*FLLGGLELFGVLAL
Trigger: CAGTGCCAGCACCCCAAAGAGCTCTAACCCTCCCAAGAGGAAGCATGTGGAAGAGTCAGTACTCCACGAACAGAGATGTGGCACGGAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS CCA 90 bp GCCCTACGGGCCCTACGCCCACACCCCTGCAGTAGAGTGCTCTTCTaGTTAATATCCTCCATGGAATCCAACCCCTGCTTCCTTCTGATA +
Preference number: 5 (lower is better)
Translates to: ALRALRPHPCSRVLF*LISSMESNPCFLLI
Trigger: TATCAGAAGGAAGCAGGGGTTGGATTCCATGGAGGATATTAACCAGAAGAGCACTCTACTGCAGGGGTGTGGGCGTAGGGCCCGTAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522169.1
CDS-3UTR CAA 90 bp TTACAGGCAAAAAGCAGAACCAACTCGCTGTGCCTGGAAGGGATGTTAACCCCGGTGGAGAGGGAAGCCTaGGCAGGTCTGCTGTCTGAC +
Preference number: 5 (lower is better)
Translates to: LQAKSRTNSLCLEGMLTPVEREA*AGLLSD
Trigger: GTCAGACAGCAGACCTGCCAAGGCTTCCCTCTCCAC...CGGGGTTAACATCCCTTCCAGGCACAGCGAGTTGGTTCTGCTTTTTGCCTGTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp TGTGGCATTCTGCTTCAAGCCACCTGCATCCTAGAGAGCAAGGATTCAAACTCATCTGTGGTGGCCACGTaGGCCCCTAAGCTCTCCCCG +
Preference number: 5 (lower is better)
Translates to: CGILLQATCILESKDSNSSVVAT*APKLSP
Trigger: CGGGGAGAGCTTAGGGGCCAACGTGGCCACCACAGA...TGAGTTTGAATCCTTGCTCTCTAGGATGCAGGTGGCTTGAAGCAGAATGCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp TTTCTTTGGCTTACAGGCAAAAAGCAGAACCAACTCGCTGTGCCTGGAAGGGATTCTGTGGTGGCCACGTaGGCCCCTAAGCTCTCCCCG +
Preference number: 5 (lower is better)
Translates to: FLWLTGKKQNQLAVPGRDSVVAT*APKLSP
Trigger: CGGGGAGAGCTTAGGGGCCAACGTGGCCACCACAGA...ATCCCTTCCAGGCACAGCGAGTTGGTTCTGCTTTTTGCCTGTAAGCCAAAGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp AGATTCAGTGATCTGTTGGGGGTTGGGTGCTTCCCTGGTGTACCCAAATCCCACAGAAGCTCATCTCGGTaGTCGAGGGATGCCTCAGCC +
Preference number: 5 (lower is better)
Translates to: RFSDLLGVGCFPGVPKSHRSSSR*SRDASA
Trigger: GGCTGAGGCATCCCTCGACAACCGAGATGAGCTTCT...GTGGGATTTGGGTACACCAGGGAAGCACCCAACCCCCAACAGATCACTGAATCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520108.1
CDS-3UTR CAA 90 bp TTACAGGCAAAAAGCAGAACCAACTCGCTGTGCCTGGAAGGGATGTTAACCCCGACACTGGGTGGTGAGTaGGTCGAGCCACTTCGGGGA +
Preference number: 5 (lower is better)
Translates to: LQAKSRTNSLCLEGMLTPTLGGE*VEPLRG
Trigger: TCCCCGAAGTGGCTCGACCAACTCACCACCCAGTGT...CGGGGTTAACATCCCTTCCAGGCACAGCGAGTTGGTTCTGCTTTTTGCCTGTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp CCAGGGTCCTCTAGACTCCAAGATTCAGTGATCTGTTGGGGGTTGGGTGCTTCCCCTGTGTCCTCTTGGTaGAGGGGTTGCTCTACACGT +
Preference number: 5 (lower is better)
Translates to: PGSSRLQDSVICWGLGASPVSSW*RGCSTR
Trigger: ACGTGTAGAGCAACCCCTCAACCAAGAGGACACAGG...GGAAGCACCCAACCCCCAACAGATCACTGAATCTTGGAGTCTAGAGGACCCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000520108.1
CDS GCA 90 bp CTGCAGCTCCTCATATGGTCAGTGAACTCTGGGATCGGCGATGGCTaGTCCTCTTTGAGCACCGGCACATATCAGTCTGTCCTCTTGAGT +
Preference number: 5 (lower is better)
Translates to: LQLLIWSVNSGIGDG*SSLSTGTYQSVLLS
Trigger: ACTCAAGAGGACAGACTGATATGTGCCGGTGCTCAAAGAGGAGCAGCCATCGCCGATCCCAGAGTTCACTGACCATATGAGGAGCTGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS CCA 90 bp ATAGTTGCTGGATCCTGGGCCCATCTAGCCGAGAAGGACAGGCATTaGTATTGGGTCCACTCTTCACCATCTGAGTCCAGCTCCTTTGGG +
Preference number: 5 (lower is better)
Translates to: IVAGSWAHLAEKDRH*YWVHSSPSESSSFG
Trigger: CCCAAAGGAGCTGGACTCAGATGGTGAAGAGTGGACCCAATACCAATGCCTGTCCTTCTCGGCTAGATGGGCCCAGGATCCAGCAACTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327245.10
ENST00000520108.1
ENST00000642502.1
CDS CCA 90 bp GCTCCTCCTCAGAGGCTGAGCACCTTTTTGGCTTCTCATAGTTGCTaGATCCTGGGCCCATCTAGCCGAGAAGGACAGGCATTGGTATTG +
Preference number: 5 (lower is better)
Translates to: APPQRLSTFLASHSC*ILGPSSREGQALVL
Trigger: CAATACCAATGCCTGTCCTTCTCGGCTAGATGGGCCCAGGATCCAGCAACTATGAGAAGCCAAAAAGGTGCTCAGCCTCTGAGGAGGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327245.10
ENST00000520108.1
ENST00000642502.1
CDS-3UTR CAA 90 bp TTACAGGCAAAAAGCAGAACCAACTCGCTGTGCCTGGAAGGGATGTTAACCCCGTACCGGGGGCCACTGTaGTTCAGCATGGCTTTCGTC +
Preference number: 5 (lower is better)
Translates to: LQAKSRTNSLCLEGMLTPYRGPL*FSMAFV
Trigger: GACGAAAGCCATGCTGAACAACAGTGGCCCCCGGTA...CGGGGTTAACATCCCTTCCAGGCACAGCGAGTTGGTTCTGCTTTTTGCCTGTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp GCTGTGCCTGGAAGGGATGTTAACCCCGATTCAGCCATTACTGCAATACACTTGATGCGCCGCTCAATCTaGCTGCGTTTGTACCGGGGG +
Preference number: 5 (lower is better)
Translates to: AVPGRDVNPDSAITAIHLMRRSI*LRLYRG
Trigger: CCCCCGGTACAAACGCAGCAAGATTGAGCGGCGCAT...CAAGTGTATTGCAGTAATGGCTGAATCGGGGTTAACATCCCTTCCAGGCACAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp CCAGGGTCCTCTAGACTCCAAGATTCAGTGATCTGTTGGGGGTTGGGTGCTTCCCGAGAAGGACAGGCATaGGTATTGGGTCCACTCTTC +
Preference number: 5 (lower is better)
Translates to: PGSSRLQDSVICWGLGASREGQA*VLGPLF
Trigger: GAAGAGTGGACCCAATACCAATGCCTGTCCTTCTCG...GGAAGCACCCAACCCCCAACAGATCACTGAATCTTGGAGTCTAGAGGACCCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520108.1
CDS-3UTR CAA 90 bp TCACTTTGCCAGGTATGTGTACCTGCCCCTTATTGGGCAATCCTCATGCAGGATGTGCCCCATAGACCTTaGCCGGTAGTGGCCCTGGAT +
Preference number: 5 (lower is better)
Translates to: SLCQVCVPAPYWAILMQDVPHRP*PVVALD
Trigger: ATCCAGGGCCACTACCGGCAAAGGTCTATGGGGCAC...ATCCTGCATGAGGATTGCCCAATAAGGGGCAGGTACACATACCTGGCAAAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp GCTGTGCCTGGAAGGGATGTTAACCCCGATTCAGCCATTACTGCAATACACTTGACACTGGGTGGTGAGTaGGTCGAGCCACTTCGGGGA +
Preference number: 5 (lower is better)
Translates to: AVPGRDVNPDSAITAIHLTLGGE*VEPLRG
Trigger: TCCCCGAAGTGGCTCGACCAACTCACCACCCAGTGT...CAAGTGTATTGCAGTAATGGCTGAATCGGGGTTAACATCCCTTCCAGGCACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS TCA 90 bp CAGGTTCTGTTGCCAGGGTATCTCCTGGAGACCTCTTCCCAATCTTaGTGGAATATGCTGTTGTTGGGGAACACGACCCGCTGCTGTGTC +
Preference number: 5 (lower is better)
Translates to: QVLLPGYLLETSSQS*WNMLLLGNTTRCCV
Trigger: GACACAGCAGCGGGTCGTGTTCCCCAACAACAGCATATTCCATCAAGATTGGGAAGAGGTCTCCAGGAGATACCCTGGCAACAGAACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327245.10
ENST00000517802.5
ENST00000518411.5
ENST00000521033.5
CDS TCA 90 bp GCTGGCCTTCCATCACCCAATAGGGATTGGTGGGGCTGTTGCAGATaGCGCAGGTGGCATTGTACAGGAGGGATACCAGAAAGTACATCA +
Preference number: 5 (lower is better)
Translates to: AGLPSPNRDWWGCCR*RRWHCTGGIPESTS
Trigger: TGATGTACTTTCTGGTATCCCTCCTGTACAATGCCACCTGCGTCATCTGCAACAGCCCCACCAATCCCTATTGGGTGATGGAAGGCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp TTACAGGCAAAAAGCAGAACCAACTCGCTGTGCCTGGAAGGGATGTTAACCCCGTCAATCTTGCTGCGTTaGTACCGGGGGCCACTGTTG +
Preference number: 5 (lower is better)
Translates to: LQAKSRTNSLCLEGMLTPSILLR*YRGPLL
Trigger: CAACAGTGGCCCCCGGTACAAACGCAGCAAGATTGA...CGGGGTTAACATCCCTTCCAGGCACAGCGAGTTGGTTCTGCTTTTTGCCTGTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp GGGGGTTGGGTGCTTCCCTGGTGTACCCAAATCCCACCTAGAAGCCTGTGTCCTTACAGGTCAAGGTCATaGCTCAAGAAGAACACTTGC +
Preference number: 5 (lower is better)
Translates to: GGWVLPWCTQIPPRSLCPYRSRS*LKKNTC
Trigger: GCAAGTGTTCTTCTTGAGCAATGACCTTGACCTGTA...AGGACACAGGCTTCTAGGTGGGATTTGGGTACACCAGGGAAGCACCCAACCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520108.1
CDS-3UTR CAA 90 bp CCAGGGTCCTCTAGACTCCAAGATTCAGTGATCTGTTGGGGGTTGGGTGCTTCCAGGCTGAGCACCTTTTaGGCTTCTCATAGTTGCTGG +
Preference number: 5 (lower is better)
Translates to: PGSSRLQDSVICWGLGASRLSTF*ASHSCW
Trigger: CCAGCAACTATGAGAAGCCAAAAAGGTGCTCAGCCT...GGAAGCACCCAACCCCCAACAGATCACTGAATCTTGGAGTCTAGAGGACCCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520108.1
CDS-3UTR CAA 90 bp GTTGGGTGCTTCCCTGGTGTACCCAAATCCCACCTAGAAGCCTGTGTCCTCTTGTGCGCAGGCCATCTCTaGCATACAAGTCTAGATGCT +
Preference number: 5 (lower is better)
Translates to: VGCFPGVPKSHLEACVLLCAGHL*HTSLDA
Trigger: AGCATCTAGACTTGTATGCAAGAGATGGCCTGCGCA...CAAGAGGACACAGGCTTCTAGGTGGGATTTGGGTACACCAGGGAAGCACCCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520108.1
CDS-3UTR CAA 90 bp GGGTCCTCTAGACTCCAAGATTCAGTGATCTGTTGGGGGTTGGGTGCTTCCCTGTCGCTTACAACCTTCTaGGCAATGCATAGTGTGCGC +
Preference number: 5 (lower is better)
Translates to: GSSRLQDSVICWGLGASLSLTTF*AMHSVR
Trigger: GCGCACACTATGCATTGCCAAGAAGGTTGTAAGCGA...CAGGGAAGCACCCAACCCCCAACAGATCACTGAATCTTGGAGTCTAGAGGACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520108.1
CDS-3UTR CAA 90 bp AGATTCAGTGATCTGTTGGGGGTTGGGTGCTTCCCTGGTGTACCCAAATCCCACCAGGAATGGGCAATGTaGACCGCTGTCTCCTGCTTA +
Preference number: 5 (lower is better)
Translates to: RFSDLLGVGCFPGVPKSHQEWAM*TAVSCL
Trigger: TAAGCAGGAGACAGCGGTCAACATTGCCCATTCCTG...GTGGGATTTGGGTACACCAGGGAAGCACCCAACCCCCAACAGATCACTGAATCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520108.1
CDS-3UTR CAA 90 bp TGTGGCATTCTGCTTCAAGCCACCTGCATCCTAGAGAGCAAGGATTCAAACTCAGGATTGGTGGGGCTGTaGCAGATGACGCAGGTGGCA +
Preference number: 5 (lower is better)
Translates to: CGILLQATCILESKDSNSGLVGL*QMTQVA
Trigger: TGCCACCTGCGTCATCTGCAACAGCCCCACCAATCC...TGAGTTTGAATCCTTGCTCTCTAGGATGCAGGTGGCTTGAAGCAGAATGCCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp TTACAGGCAAAAAGCAGAACCAACTCGCTGTGCCTGGAAGGGATGTTAACCCCGAGGGTTAGGCTATACTaGCCCACAGCAGACCTGGCT +
Preference number: 5 (lower is better)
Translates to: LQAKSRTNSLCLEGMLTPRVRLY*PTADLA
Trigger: AGCCAGGTCTGCTGTGGGCAAGTATAGCCTAACCCT...CGGGGTTAACATCCCTTCCAGGCACAGCGAGTTGGTTCTGCTTTTTGCCTGTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp AGATTCAGTGATCTGTTGGGGGTTGGGTGCTTCCCTGGTGTACCCAAATCCCACAGATTCAGTGATCTGTaGGGGGTTGGGTGCTTCCCT +
Preference number: 5 (lower is better)
Translates to: RFSDLLGVGCFPGVPKSHRFSDL*GVGCFP
Trigger: AGGGAAGCACCCAACCCCCAACAGATCACTGAATCT...GTGGGATTTGGGTACACCAGGGAAGCACCCAACCCCCAACAGATCACTGAATCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000520108.1
CDS TCA 90 bp AGCCGAGAAGGACAGGCATTGGTATTGGGTCCACTCTTCACCATCTaGGTCCAGCTCCTTTGGGGTCTCCAGTCGCTTAGCATTTTCTTG +
Preference number: 5 (lower is better)
Translates to: SREGQALVLGPLFTI*VQLLWGLQSLSIFL
Trigger: CAAGAAAATGCTAAGCGACTGGAGACCCCAAAGGAGCTGGACTCAGATGGTGAAGAGTGGACCCAATACCAATGCCTGTCCTTCTCGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327245.10
ENST00000520108.1
ENST00000642502.1
CDS TCA 90 bp AGCAACAACTGGTGTGAGAAAGCAGACGAGGTAGAAAGTGGGGTTTaGGAGCTGGCCTTCCATCACCCAATAGGGATTGGTGGGGCTGTT +
Preference number: 5 (lower is better)
Translates to: SNNWCEKADEVESGV*ELAFHHPIGIGGAV
Trigger: AACAGCCCCACCAATCCCTATTGGGTGATGGAAGGCCAGCTCTCAAACCCCACTTTCTACCTCGTCTGCTTTCTCACACCAGTTGTTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS GCA 90 bp TTTGTACCTCCGGAGGTCTTCCCAAGCGTCCTTGATGGCAGTGACTaGCAGGATAACACAGATTGGTATCATGCTCACCTCAGGCTGGAA +
Preference number: 5 (lower is better)
Translates to: FVPPEVFPSVLDGSD*QDNTDWYHAHLRLE
Trigger: TTCCAGCCTGAGGTGAGCATGATACCAATCTGTGTTATCCTGGCAGTCACTGCCATCAAGGACGCTTGGGAAGACCTCCGGAGGTACAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326831.7
ENST00000642502.1
CDS GCA 90 bp TGCCAGGGTATCTCCTGGAGACCTCTTCCCAATCTTGATGGAATATaGTGTTGTTGGGGAACACGACCCGCTGCTGTGTCAAGTTGTAGC +
Preference number: 5 (lower is better)
Translates to: CQGISWRPLPNLDGI*CCWGTRPAAVSSCS
Trigger: GCTACAACTTGACACAGCAGCGGGTCGTGTTCCCCAACAACAGCATATTCCATCAAGATTGGGAAGAGGTCTCCAGGAGATACCCTGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327245.10
ENST00000517802.5
ENST00000518411.5
ENST00000521033.5
CDS CCA 90 bp GACCATGCACCTAGACACAGACCTGCCCTGACATGTCAGGTAAGGTaGCCTGAGAAATTCCTAAGCCTTGGTTGTGTGACTGGCACACAA +
Preference number: 5 (lower is better)
Translates to: DHAPRHRPALTCQVR*PEKFLSLGCVTGTQ
Trigger: TTGTGTGCCAGTCACACAACCAAGGCTTAGGAATTTCTCAGGCCACCTTACCTGACATGTCAGGGCAGGTCTGTGTCTAGGTGCATGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326831.7
ENST00000517802.5
ENST00000521033.5
CDS CCA 90 bp ATTTCTGCAGCTCCTCATATGGTCAGTGAACTCTGGGATCGGCGATaGCTGCTCCTCTTTGAGCACCGGCACATATCAGTCTGTCCTCTT +
Preference number: 5 (lower is better)
Translates to: ISAAPHMVSELWDRR*LLLFEHRHISVCPL
Trigger: AAGAGGACAGACTGATATGTGCCGGTGCTCAAAGAGGAGCAGCCATCGCCGATCCCAGAGTTCACTGACCATATGAGGAGCTGCAGAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS CCA 90 bp AGGTGGCCTCTGTTGAGTTTGTACAGATTTCTGCAGCTCCTCATATaGTCAGTGAACTCTGGGATCGGCGATGGCTGCTCCTCTTTGAGC +
Preference number: 5 (lower is better)
Translates to: RWPLLSLYRFLQLLI*SVNSGIGDGCSSLS
Trigger: GCTCAAAGAGGAGCAGCCATCGCCGATCCCAGAGTTCACTGACCATATGAGGAGCTGCAGAAATCTGTACAAACTCAACAGAGGCCACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp TGTGGCATTCTGCTTCAAGCCACCTGCATCCTAGAGAGCAAGGATTCAAACTCATCTTCCCAAGCGTCCTaGATGGCAGTGACTGCCAGG +
Preference number: 5 (lower is better)
Translates to: CGILLQATCILESKDSNSSSQAS*MAVTAR
Trigger: CCTGGCAGTCACTGCCATCAAGGACGCTTGGGAAGA...TGAGTTTGAATCCTTGCTCTCTAGGATGCAGGTGGCTTGAAGCAGAATGCCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642502.1
CDS-3UTR CAA 90 bp GCTGTGCCTGGAAGGGATGTTAACCCCGATTCAGCCATTACTGCAATACACTTGTCAATCTTGCTGCGTTaGTACCGGGGGCCACTGTTG +
Preference number: 5 (lower is better)
Translates to: AVPGRDVNPDSAITAIHLSILLR*YRGPLL
Trigger: CAACAGTGGCCCCCGGTACAAACGCAGCAAGATTGA...CAAGTGTATTGCAGTAATGGCTGAATCGGGGTTAACATCCCTTCCAGGCACAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp GCTGTGCCTGGAAGGGATGTTAACCCCGATTCAGCCATTACTGCAATACACTTGGCTCAAGAAGAACACTaGCCCGAGCTTCACCAGCTC +
Preference number: 5 (lower is better)
Translates to: AVPGRDVNPDSAITAIHLAQEEH*PELHQL
Trigger: GAGCTGGTGAAGCTCGGGCAAGTGTTCTTCTTGAGC...CAAGTGTATTGCAGTAATGGCTGAATCGGGGTTAACATCCCTTCCAGGCACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp GCTGTGCCTGGAAGGGATGTTAACCCCGATTCAGCCATTACTGCAATACACTTGGTTGTGCAGGTTCTGTaGCCAGGGTATCTCCTGGAG +
Preference number: 5 (lower is better)
Translates to: AVPGRDVNPDSAITAIHLVVQVL*PGYLLE
Trigger: CTCCAGGAGATACCCTGGCAACAGAACCTGCACAAC...CAAGTGTATTGCAGTAATGGCTGAATCGGGGTTAACATCCCTTCCAGGCACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327245.10
CDS-3UTR CAA 90 bp TTACAGGCAAAAAGCAGAACCAACTCGCTGTGCCTGGAAGGGATGTTAACCCCGTCAAAGCGGTGTCTCTaGAAGTCCTCCATGCCATCC +
Preference number: 5 (lower is better)
Translates to: LQAKSRTNSLCLEGMLTPSKRCL*KSSMPS
Trigger: GGATGGCATGGAGGACTTCAAGAGACACCGCTTTGA...CGGGGTTAACATCCCTTCCAGGCACAGCGAGTTGGTTCTGCTTTTTGCCTGTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327245.10
CDS-3UTR CAA 90 bp GGGTCCTCTAGACTCCAAGATTCAGTGATCTGTTGGGGGTTGGGTGCTTCCCTGTCGCTTAGCATTTTCTaGGTGAGAATACTCGCTGCC +
Preference number: 5 (lower is better)
Translates to: GSSRLQDSVICWGLGASLSLSIF*VRILAA
Trigger: GGCAGCGAGTATTCTCACCAAGAAAATGCTAAGCGA...CAGGGAAGCACCCAACCCCCAACAGATCACTGAATCTTGGAGTCTAGAGGACCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520108.1
CDS-3UTR CAA 90 bp TGTGGCATTCTGCTTCAAGCCACCTGCATCCTAGAGAGCAAGGATTCAAACTCAGCCTTGCTTGAGGGTTaGATGGTGACCCTCTGCCTG +
Preference number: 5 (lower is better)
Translates to: CGILLQATCILESKDSNSALLEG*MVTLCL
Trigger: CAGGCAGAGGGTCACCATCAAACCCTCAAGCAAGGC...TGAGTTTGAATCCTTGCTCTCTAGGATGCAGGTGGCTTGAAGCAGAATGCCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp TGTGGCATTCTGCTTCAAGCCACCTGCATCCTAGAGAGCAAGGATTCAAACTCAGACGTCCCCAGAGCCTaGCTTGAGGGTTTGATGGTG +
Preference number: 5 (lower is better)
Translates to: CGILLQATCILESKDSNSDVPRA*LEGLMV
Trigger: CACCATCAAACCCTCAAGCAAGGCTCTGGGGACGTC...TGAGTTTGAATCCTTGCTCTCTAGGATGCAGGTGGCTTGAAGCAGAATGCCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp TTACAGGCAAAAAGCAGAACCAACTCGCTGTGCCTGGAAGGGATGTTAACCCCGATGACGCAGGTGGCATaGTACAGGAGGGATACCAGA +
Preference number: 5 (lower is better)
Translates to: LQAKSRTNSLCLEGMLTPMTQVA*YRRDTR
Trigger: TCTGGTATCCCTCCTGTACAATGCCACCTGCGTCAT...CGGGGTTAACATCCCTTCCAGGCACAGCGAGTTGGTTCTGCTTTTTGCCTGTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp TGTGGCATTCTGCTTCAAGCCACCTGCATCCTAGAGAGCAAGGATTCAAACTCATTTGTGTCAGACCCCTaGGGGCCAGCACTTCCTCCA +
Preference number: 5 (lower is better)
Translates to: CGILLQATCILESKDSNSFVSDP*GPALPP
Trigger: TGGAGGAAGTGCTGGCCCCAAGGGGTCTGACACAAA...TGAGTTTGAATCCTTGCTCTCTAGGATGCAGGTGGCTTGAAGCAGAATGCCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp GGGGGTTGGGTGCTTCCCTGGTGTACCCAAATCCCACCTAGAAGCCTGTGTCCTGGGTTGCTCTACACGTaGATATCTGCAGATATCAAT +
Preference number: 5 (lower is better)
Translates to: GGWVLPWCTQIPPRSLCPGLLYT*ISADIN
Trigger: ATTGATATCTGCAGATATCAACGTGTAGAGCAACCC...AGGACACAGGCTTCTAGGTGGGATTTGGGTACACCAGGGAAGCACCCAACCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520108.1
CDS TCA 90 bp GAAAGAGGGATGGAGCCCTTGGGAGCTTCTATACCATTTTCTTGGTaGGAATACTCGCTGCCCATGATGGTGCAACGTCGGAACACCATC +
Preference number: 5 (lower is better)
Translates to: ERGMEPLGASIPFSW*EYSLPMMVQRRNTI
Trigger: GATGGTGTTCCGACGTTGCACCATCATGGGCAGCGAGTATTCTCACCAAGAAAATGGTATAGAAGCTCCCAAGGGCTCCATCCCTCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326831.7
ENST00000517802.5
ENST00000521033.5
CDS GCA 90 bp TCGAACTGTACCTCCTGCTGTGAGAAGCCCTTCACGACACATCTTTaGTTGAGGTTTGTCTCTCCATCCAAGCTGGCAGTTTCCAGATGG +
Preference number: 5 (lower is better)
Translates to: SNCTSCCEKPFTTHL*LRFVSPSKLAVSRW
Trigger: CCATCTGGAAACTGCCAGCTTGGATGGAGAGACAAACCTCAAGCAAAGATGTGTCGTGAAGGGCTTCTCACAGCAGGAGGTACAGTTCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326831.7
ENST00000327245.10
ENST00000517802.5
ENST00000521033.5
ENST00000642502.1
CDS CCA 90 bp TTCCCAAGCGTCCTTGATGGCAGTGACTGCCAGGATAACACAGATTaGTATCATGCTCACCTCAGGCTGGAAAGCATTGACCACAGGGAT +
Preference number: 5 (lower is better)
Translates to: FPSVLDGSDCQDNTD*YHAHLRLESIDHRD
Trigger: ATCCCTGTGGTCAATGCTTTCCAGCCTGAGGTGAGCATGATACCAATCTGTGTTATCCTGGCAGTCACTGCCATCAAGGACGCTTGGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326831.7
ENST00000642502.1
CDS CCA 90 bp ATCTCCTGGAGACCTCTTCCCAATCTTGATGGAATATGCTGTTGTTaGGGAACACGACCCGCTGCTGTGTCAAGTTGTAGCTCTGTCTCC +
Preference number: 5 (lower is better)
Translates to: ISWRPLPNLDGICCC*GTRPAAVSSCSSVS
Trigger: GGAGACAGAGCTACAACTTGACACAGCAGCGGGTCGTGTTCCCCAACAACAGCATATTCCATCAAGATTGGGAAGAGGTCTCCAGGAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327245.10
ENST00000517802.5
ENST00000518411.5
ENST00000521033.5
CDS CCA 90 bp GAGTTTGTACAGATTTCTGCAGCTCCTCATATGGTCAGTGAACTCTaGGATCGGCGATGGCTGCTCCTCTTTGAGCACCGGCACATATCA +
Preference number: 5 (lower is better)
Translates to: EFVQISAAPHMVSEL*DRRWLLLFEHRHIS
Trigger: TGATATGTGCCGGTGCTCAAAGAGGAGCAGCCATCGCCGATCCCAGAGTTCACTGACCATATGAGGAGCTGCAGAAATCTGTACAAACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS CCA 90 bp GACAGCCTCTCTAGAATCCAAGGAGGGCAGATCAGAAGGGATCAGTaGTCTAGGCTGGCTCTTCATCCGTTTATCCAGCAAGCATTGACT +
Preference number: 5 (lower is better)
Translates to: DSLSRIQGGQIRRDQ*SRLALHPFIQQALT
Trigger: AGTCAATGCTTGCTGGATAAACGGATGAAGAGCCAGCCTAGACCACTGATCCCTTCTGATCTGCCCTCCTTGGATTCTAGAGAGGCTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523758.1
CDS-3UTR CAA 90 bp AGGCTATACTTGCCCACAGCAGACCTGGCTTCTTTGGACAGCCTATTAAAATTCTACCGGGGGCCACTGTaGTTCAGCATGGCTTTCGTC +
Preference number: 5 (lower is better)
Translates to: RLYLPTADLASLDSLLKFYRGPL*FSMAFV
Trigger: GACGAAAGCCATGCTGAACAACAGTGGCCCCCGGTA...GAATTTTAATAGGCTGTCCAAAGAAGCCAGGTCTGCTGTGGGCAAGTATAGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp CCAGGGTCCTCTAGACTCCAAGATTCAGTGATCTGTTGGGGGTTGGGTGCTTCCGCAGCATCTCGAACCTaGGTCAGTAGGTTTTTATCT +
Preference number: 5 (lower is better)
Translates to: PGSSRLQDSVICWGLGASAASRT*VSRFLS
Trigger: AGATAAAAACCTACTGACCAAGGTTCGAGATGCTGC...GGAAGCACCCAACCCCCAACAGATCACTGAATCTTGGAGTCTAGAGGACCCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000520108.1
CDS-3UTR CAA 90 bp TTGCTCCAGTTTCCTAGGATTTGGGACTCTGTAAAAATGAGAAAGTCCCAGGCAGTGGAGAGGGAAGCCTaGGCAGGTCTGCTGTCTGAC +
Preference number: 5 (lower is better)
Translates to: LLQFPRIWDSVKMRKSQAVEREA*AGLLSD
Trigger: GTCAGACAGCAGACCTGCCAAGGCTTCCCTCTCCAC...TGCCTGGGACTTTCTCATTTTTACAGAGTCCCAAATCCTAGGAAACTGGAGCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp GGTGGCATGACTCGTAGGCTCAAAGACTCACCACACTTATTGCATCTATTTCTGGCCTTGCTTGAGGGTTaGATGGTGACCCTCTGCCTG +
Preference number: 5 (lower is better)
Translates to: GGMTRRLKDSPHLLHLFLALLEG*MVTLCL
Trigger: CAGGCAGAGGGTCACCATCAAACCCTCAAGCAAGGC...CAGAAATAGATGCAATAAGTGTGGTGAGTCTTTGAGCCTACGAGTCATGCCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp AGGCTATACTTGCCCACAGCAGACCTGGCTTCTTTGGACAGCCTATTAAAATTCGACGTCCCCAGAGCCTaGCTTGAGGGTTTGATGGTG +
Preference number: 5 (lower is better)
Translates to: RLYLPTADLASLDSLLKFDVPRA*LEGLMV
Trigger: CACCATCAAACCCTCAAGCAAGGCTCTGGGGACGTC...GAATTTTAATAGGCTGTCCAAAGAAGCCAGGTCTGCTGTGGGCAAGTATAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp TTTTACAAGACTAGGGTTAGGCTATACTTGCCCACAGCAGACCTGGCTTCTTTGAGAAGCTCATCTCGGTaGTCGAGGGATGCCTCAGCC +
Preference number: 5 (lower is better)
Translates to: FYKTRVRLYLPTADLASLRSSSR*SRDASA
Trigger: GGCTGAGGCATCCCTCGACAACCGAGATGAGCTTCT...CAAAGAAGCCAGGTCTGCTGTGGGCAAGTATAGCCTAACCCTAGTCTTGTAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp TCACTTTGCCAGGTATGTGTACCTGCCCCTTATTGGGCAATCCTCATGCAGGATCAGGAATGGGCAATGTaGACCGCTGTCTCCTGCTTA +
Preference number: 5 (lower is better)
Translates to: SLCQVCVPAPYWAILMQDQEWAM*TAVSCL
Trigger: TAAGCAGGAGACAGCGGTCAACATTGCCCATTCCTG...ATCCTGCATGAGGATTGCCCAATAAGGGGCAGGTACACATACCTGGCAAAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp TGTGGCATTCTGCTTCAAGCCACCTGCATCCTAGAGAGCAAGGATTCAAACTCAGATGGCTGCTCCTCTTaGAGCACCGGCACATATCAG +
Preference number: 5 (lower is better)
Translates to: CGILLQATCILESKDSNSDGCSS*STGTYQ
Trigger: CTGATATGTGCCGGTGCTCAAAGAGGAGCAGCCATC...TGAGTTTGAATCCTTGCTCTCTAGGATGCAGGTGGCTTGAAGCAGAATGCCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp GGTGGCATGACTCGTAGGCTCAAAGACTCACCACACTTATTGCATCTATTTCTGTTTGTGTCAGACCCCTaGGGGCCAGCACTTCCTCCA +
Preference number: 5 (lower is better)
Translates to: GGMTRRLKDSPHLLHLFLFVSDP*GPALPP
Trigger: TGGAGGAAGTGCTGGCCCCAAGGGGTCTGACACAAA...CAGAAATAGATGCAATAAGTGTGGTGAGTCTTTGAGCCTACGAGTCATGCCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS GCA 90 bp AGGTGGCATTGTACAGGAGGGATACCAGAAAGTACATCAGGAAGCTaGCGAGGAGCACGACTCCGTGGAAAATGGTCCATGTCTTCATTT +
Preference number: 5 (lower is better)
Translates to: RWHCTGGIPESTSGS*RGARLRGKWSMSSF
Trigger: AAATGAAGACATGGACCATTTTCCACGGAGTCGTGCTCCTCGGCAGCTTCCTGATGTACTTTCTGGTATCCCTCCTGTACAATGCCACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS CCA 90 bp TTACAATCCTCTGAACACCTTTCACCACCCCCTGAGTCAGGCCATTaGCTCCATTCACAGATGGAGCTAAGTGACAGCTCTTCCTTTACC +
Preference number: 5 (lower is better)
Translates to: LQSSEHLSPPPESGH*LHSQMELSDSSSFT
Trigger: GGTAAAGGAAGAGCTGTCACTTAGCTCCATCTGTGAATGGAGCCAATGGCCTGACTCAGGGGGTGGTGAAAGGTGTTCAGAGGATTGTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523758.1
CDS-3UTR CAA 90 bp CTTTTTGCCTACTATATAGGTACTAGCTTAAGGTGGCTCAGTAACCCTTTCTGGATGCGCCGCTCAATCTaGCTGCGTTTGTACCGGGGG +
Preference number: 5 (lower is better)
Translates to: LFAYYIGTSLRWLSNPFWMRRSI*LRLYRG
Trigger: CCCCCGGTACAAACGCAGCAAGATTGAGCGGCGCAT...CCAGAAAGGGTTACTGAGCCACCTTAAGCTAGTACCTATATAGTAGGCAAAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp TTGCTCCAGTTTCCTAGGATTTGGGACTCTGTAAAAATGAGAAAGTCCCAGGCACGTCGGAACACCATCTaGTTCTCTGTCAGGGTCCCC +
Preference number: 5 (lower is better)
Translates to: LLQFPRIWDSVKMRKSQARRNTI*FSVRVP
Trigger: GGGGACCCTGACAGAGAACAAGATGGTGTTCCGACG...TGCCTGGGACTTTCTCATTTTTACAGAGTCCCAAATCCTAGGAAACTGGAGCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp TTTCTTTGGCTTACAGGCAAAAAGCAGAACCAACTCGCTGTGCCTGGAAGGGATTCTAGATGGCTGGAGTaGGGGATAGGGGATCCCTTT +
Preference number: 5 (lower is better)
Translates to: FLWLTGKKQNQLAVPGRDSRWLE*GIGDPF
Trigger: AAAGGGATCCCCTATCCCCAACTCCAGCCATCTAGA...ATCCCTTCCAGGCACAGCGAGTTGGTTCTGCTTTTTGCCTGTAAGCCAAAGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327245.10
CDS-3UTR CAA 90 bp GGTGGCATGACTCGTAGGCTCAAAGACTCACCACACTTATTGCATCTATTTCTGTGGAATATGCTGTTGTaGGGGAACACGACCCGCTGC +
Preference number: 5 (lower is better)
Translates to: GGMTRRLKDSPHLLHLFLWNMLL*GNTTRC
Trigger: GCAGCGGGTCGTGTTCCCCAACAACAGCATATTCCA...CAGAAATAGATGCAATAAGTGTGGTGAGTCTTTGAGCCTACGAGTCATGCCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327245.10
CDS-3UTR CAA 90 bp ACATCATCATCACTTTGCCAGGTATGTGTACCTGCCCCTTATTGGGCAATCCTCCGAGAAGGACAGGCATaGGTATTGGGTCCACTCTTC +
Preference number: 5 (lower is better)
Translates to: TSSSLCQVCVPAPYWAILREGQA*VLGPLF
Trigger: GAAGAGTGGACCCAATACCAATGCCTGTCCTTCTCG...GAGGATTGCCCAATAAGGGGCAGGTACACATACCTGGCAAAGTGATGATGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp AAAGAGCAGCATCAGAGTGTTGGCTATAGTTTGGAACTTAGGAACAGGATCAGAGTGCCCCATAGACCTTaGCCGGTAGTGGCCCTGGAT +
Preference number: 5 (lower is better)
Translates to: KEQHQSVGYSLELRNRIRVPHRP*PVVALD
Trigger: ATCCAGGGCCACTACCGGCAAAGGTCTATGGGGCAC...TCTGATCCTGTTCCTAAGTTCCAAACTATAGCCAACACTCTGATGCTGCTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp TATCTGTGGGGAAATGGGGAGACTAGACCAATAGTAGAATTTGGGAGAGGTAAAGTGGAGAGGGAAGCCTaGGCAGGTCTGCTGTCTGAC +
Preference number: 5 (lower is better)
Translates to: YLWGNGETRPIVEFGRGKVEREA*AGLLSD
Trigger: GTCAGACAGCAGACCTGCCAAGGCTTCCCTCTCCAC...TTTACCTCTCCCAAATTCTACTATTGGTCTAGTCTCCCCATTTCCCCACAGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520108.1
CDS-3UTR CAA 90 bp GCAAGAGACTTAGCCCCAGTAGTCTTCAGTTTCCTTATCTGTGGGGAAATGGGGGACACCATGACAGAGTaGCAGATGGTTAAGGCAAGG +
Preference number: 5 (lower is better)
Translates to: ARDLAPVVFSFLICGEMGDTMTE*QMVKAR
Trigger: CCTTGCCTTAACCATCTGCAACTCTGTCATGGTGTC...CCCCATTTCCCCACAGATAAGGAAACTGAAGACTACTGGGGCTAAGTCTCTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000520108.1
CDS-3UTR CAA 90 bp TTGCTCCAGTTTCCTAGGATTTGGGACTCTGTAAAAATGAGAAAGTCCCAGGCAAGAAGCTCATCTCGGTaGTCGAGGGATGCCTCAGCC +
Preference number: 5 (lower is better)
Translates to: LLQFPRIWDSVKMRKSQARSSSR*SRDASA
Trigger: GGCTGAGGCATCCCTCGACAACCGAGATGAGCTTCT...TGCCTGGGACTTTCTCATTTTTACAGAGTCCCAAATCCTAGGAAACTGGAGCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp ACATCATCATCACTTTGCCAGGTATGTGTACCTGCCCCTTATTGGGCAATCCTCCGGAATCCAAAGAGCTaGCGGTCTGGCTTCTGTAGT +
Preference number: 5 (lower is better)
Translates to: TSSSLCQVCVPAPYWAILRNPKS*RSGFCS
Trigger: ACTACAGAAGCCAGACCGCAAGCTCTTTGGATTCCG...GAGGATTGCCCAATAAGGGGCAGGTACACATACCTGGCAAAGTGATGATGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp GCTGTGCCTGGAAGGGATGTTAACCCCGATTCAGCCATTACTGCAATACACTTGGTGATGGATGGTGTCTaGGAAGGTAAGCGGAATCCA +
Preference number: 5 (lower is better)
Translates to: AVPGRDVNPDSAITAIHLVMDGV*EGKRNP
Trigger: TGGATTCCGCTTACCTTCCAAGACACCATCCATCAC...CAAGTGTATTGCAGTAATGGCTGAATCGGGGTTAACATCCCTTCCAGGCACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp AGGCTATACTTGCCCACAGCAGACCTGGCTTCTTTGGACAGCCTATTAAAATTCGTCATGACGCGCAACTaGTCTCGCACCAGCTTGACT +
Preference number: 5 (lower is better)
Translates to: RLYLPTADLASLDSLLKFVMTRN*SRTSLT
Trigger: AGTCAAGCTGGTGCGAGACAAGTTGCGCGTCATGAC...GAATTTTAATAGGCTGTCCAAAGAAGCCAGGTCTGCTGTGGGCAAGTATAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp TGTGGCATTCTGCTTCAAGCCACCTGCATCCTAGAGAGCAAGGATTCAAACTCAGAGTTCTGGCCACTCTaGTATAGCTCAGGCAATGCC +
Preference number: 5 (lower is better)
Translates to: CGILLQATCILESKDSNSEFWPL*YSSGNA
Trigger: GGCATTGCCTGAGCTATACAAGAGTGGCCAGAACTC...TGAGTTTGAATCCTTGCTCTCTAGGATGCAGGTGGCTTGAAGCAGAATGCCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp TCTTTTCCCTGTGAAGTGACACTTGCTCTGACTCTAACTGATGCAGGCCAGTGTATGACGCAGGTGGCATaGTACAGGAGGGATACCAGA +
Preference number: 5 (lower is better)
Translates to: SFPCEVTLALTLTDAGQCMTQVA*YRRDTR
Trigger: TCTGGTATCCCTCCTGTACAATGCCACCTGCGTCAT...ACACTGGCCTGCATCAGTTAGAGTCAGAGCAAGTGTCACTTCACAGGGAAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp TCACTTTGCCAGGTATGTGTACCTGCCCCTTATTGGGCAATCCTCATGCAGGATTCCACATGCTTCCTCTaGGGAGGGTTAGAGCTCTTT +
Preference number: 5 (lower is better)
Translates to: SLCQVCVPAPYWAILMQDSTCFL*GGLELF
Trigger: AAAGAGCTCTAACCCTCCCAAGAGGAAGCATGTGGA...ATCCTGCATGAGGATTGCCCAATAAGGGGCAGGTACACATACCTGGCAAAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp GCTGGTGGCATGACTCGTAGGCTCAAAGACTCACCACACTTATTGCATCTATTTGATGGCTGCTCCTCTTaGAGCACCGGCACATATCAG +
Preference number: 5 (lower is better)
Translates to: AGGMTRRLKDSPHLLHLFDGCSS*STGTYQ
Trigger: CTGATATGTGCCGGTGCTCAAAGAGGAGCAGCCATC...AAATAGATGCAATAAGTGTGGTGAGTCTTTGAGCCTACGAGTCATGCCACCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp CTTTTTGCCTACTATATAGGTACTAGCTTAAGGTGGCTCAGTAACCCTTTCTGGCTGGGTTTCCCGTCTTaGTGTCAGACCCCTTGGGGC +
Preference number: 5 (lower is better)
Translates to: LFAYYIGTSLRWLSNPFWLGFPS*CQTPWG
Trigger: GCCCCAAGGGGTCTGACACAAAGACGGGAAACCCAG...CCAGAAAGGGTTACTGAGCCACCTTAAGCTAGTACCTATATAGTAGGCAAAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp AGGCTATACTTGCCCACAGCAGACCTGGCTTCTTTGGACAGCCTATTAAAATTCAGGGTTAGGCTATACTaGCCCACAGCAGACCTGGCT +
Preference number: 5 (lower is better)
Translates to: RLYLPTADLASLDSLLKFRVRLY*PTADLA
Trigger: AGCCAGGTCTGCTGTGGGCAAGTATAGCCTAACCCT...GAATTTTAATAGGCTGTCCAAAGAAGCCAGGTCTGCTGTGGGCAAGTATAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp GCTGGTGGCATGACTCGTAGGCTCAAAGACTCACCACACTTATTGCATCTATTTCCTTCCAGTCCAGGTTaGCCAGGAAGATGGTCAGAG +
Preference number: 5 (lower is better)
Translates to: AGGMTRRLKDSPHLLHLFPSSPG*PGRWSE
Trigger: CTCTGACCATCTTCCTGGCAAACCTGGACTGGAAGG...AAATAGATGCAATAAGTGTGGTGAGTCTTTGAGCCTACGAGTCATGCCACCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS GCA 90 bp ACGACTCCGTGGAAAATGGTCCATGTCTTCATTTCCATTGCCTGGTaGAAAAGGATTGTGGTGAGGGAGATGGTGTTGATTGGTGTCCCA +
Preference number: 5 (lower is better)
Translates to: TTPWKMVHVFISIAW*KRIVVREMVLIGVP
Trigger: TGGGACACCAATCAACACCATCTCCCTCACCACAATCCTTTTGCACCAGGCAATGGAAATGAAGACATGGACCATTTTCCACGGAGTCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS GCA 90 bp AGTAGAGTGCTCTTCTGGTTAATATCCTCCATGGAATCCAACCCCTaGTTCCTTCTGATAGGAGCACACAATCTCAGTGCCCACTTCCCA +
Preference number: 5 (lower is better)
Translates to: SRVLFWLISSMESNP*FLLIGAHNLSAHFP
Trigger: TGGGAAGTGGGCACTGAGATTGTGTGCTCCTATCAGAAGGAAGCAGGGGTTGGATTCCATGGAGGATATTAACCAGAAGAGCACTCTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522169.1
CDS CCA 90 bp GTGACTGCCAGGATAACACAGATTGGTATCATGCTCACCTCAGGCTaGAAAGCATTGACCACAGGGATAAAATTCAGAACCGCAATGCCC +
Preference number: 5 (lower is better)
Translates to: VTARITQIGIMLTSG*KALTTGIKFRTAMP
Trigger: GGGCATTGCGGTTCTGAATTTTATCCCTGTGGTCAATGCTTTCCAGCCTGAGGTGAGCATGATACCAATCTGTGTTATCCTGGCAGTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326831.7
ENST00000642502.1
CDS CCA 90 bp AGAGGGTGTATTTGGTTGTGCAGGTTCTGTTGCCAGGGTATCTCCTaGAGACCTCTTCCCAATCTTGATGGAATATGCTGTTGTTGGGGA +
Preference number: 5 (lower is better)
Translates to: RGCIWLCRFCCQGIS*RPLPNLDGICCCWG
Trigger: TCCCCAACAACAGCATATTCCATCAAGATTGGGAAGAGGTCTCCAGGAGATACCCTGGCAACAGAACCTGCACAACCAAATACACCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327245.10
ENST00000517802.5
ENST00000518411.5
ENST00000521033.5
CDS CCA 90 bp AGCACGACTCCGTGGAAAATGGTCCATGTCTTCATTTCCATTGCCTaGTGCAAAAGGATTGTGGTGAGGGAGATGGTGTTGATTGGTGTC +
Preference number: 5 (lower is better)
Translates to: STTPWKMVHVFISIA*CKRIVVREMVLIGV
Trigger: GACACCAATCAACACCATCTCCCTCACCACAATCCTTTTGCACCAGGCAATGGAAATGAAGACATGGACCATTTTCCACGGAGTCGTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp GCTGTGCCTGGAAGGGATGTTAACCCCGATTCAGCCATTACTGCAATACACTTGATGACTTTATCCGATTaGTACCTCCGGAGGTCTTCC +
Preference number: 5 (lower is better)
Translates to: AVPGRDVNPDSAITAIHLMTLSD*YLRRSS
Trigger: GGAAGACCTCCGGAGGTACAAATCGGATAAAGTCAT...CAAGTGTATTGCAGTAATGGCTGAATCGGGGTTAACATCCCTTCCAGGCACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642502.1
CDS-3UTR CAA 90 bp GCTGTGCCTGGAAGGGATGTTAACCCCGATTCAGCCATTACTGCAATACACTTGACGACACATCTTTGCTaGAGGTTTGTCTCTCCATCC +
Preference number: 5 (lower is better)
Translates to: AVPGRDVNPDSAITAIHLTTHLC*RFVSPS
Trigger: GGATGGAGAGACAAACCTCAAGCAAAGATGTGTCGT...CAAGTGTATTGCAGTAATGGCTGAATCGGGGTTAACATCCCTTCCAGGCACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp ACCAACTCGCTGTGCCTGGAAGGGATGTTAACCCCGATTCAGCCATTACTGCAAAATTTGTTGAGGTGGTaGTTGGGTTTCTCACACACG +
Preference number: 5 (lower is better)
Translates to: TNSLCLEGMLTPIQPLLQNLLRW*LGFSHT
Trigger: CGTGTGTGAGAAACCCAACAACCACCTCAACAAATT...TTGCAGTAATGGCTGAATCGGGGTTAACATCCCTTCCAGGCACAGCGAGTTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp GCTGTGCCTGGAAGGGATGTTAACCCCGATTCAGCCATTACTGCAATACACTTGAGCCCATCTATGAAATaGCTCAAAGAGATTCCGGGG +
Preference number: 5 (lower is better)
Translates to: AVPGRDVNPDSAITAIHLSPSMK*LKEIPG
Trigger: CCCCGGAATCTCTTTGAGCAATTTCATAGATGGGCT...CAAGTGTATTGCAGTAATGGCTGAATCGGGGTTAACATCCCTTCCAGGCACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327245.10
CDS-3UTR CAA 90 bp TTTCTTTGGCTTACAGGCAAAAAGCAGAACCAACTCGCTGTGCCTGGAAGGGATAGGCTGAGCACCTTTTaGGCTTCTCATAGTTGCTGG +
Preference number: 5 (lower is better)
Translates to: FLWLTGKKQNQLAVPGRDRLSTF*ASHSCW
Trigger: CCAGCAACTATGAGAAGCCAAAAAGGTGCTCAGCCT...ATCCCTTCCAGGCACAGCGAGTTGGTTCTGCTTTTTGCCTGTAAGCCAAAGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp ACCAACTCGCTGTGCCTGGAAGGGATGTTAACCCCGATTCAGCCATTACTGCAAGCAGCATCTCGAACCTaGGTCAGTAGGTTTTTATCT +
Preference number: 5 (lower is better)
Translates to: TNSLCLEGMLTPIQPLLQAASRT*VSRFLS
Trigger: AGATAAAAACCTACTGACCAAGGTTCGAGATGCTGC...TTGCAGTAATGGCTGAATCGGGGTTAACATCCCTTCCAGGCACAGCGAGTTGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp TTTCCTTATCTGTGGGGAAATGGGGAGACTAGACCAATAGTAGAATTTGGGAGAGACGTCCCCAGAGCCTaGCTTGAGGGTTTGATGGTG +
Preference number: 5 (lower is better)
Translates to: FPYLWGNGETRPIVEFGRDVPRA*LEGLMV
Trigger: CACCATCAAACCCTCAAGCAAGGCTCTGGGGACGTC...TCTCCCAAATTCTACTATTGGTCTAGTCTCCCCATTTCCCCACAGATAAGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000520108.1
CDS-3UTR CAA 90 bp TGTGGCATTCTGCTTCAAGCCACCTGCATCCTAGAGAGCAAGGATTCAAACTCATGCGCAGGCCATCTCTaGCATACAAGTCTAGATGCT +
Preference number: 5 (lower is better)
Translates to: CGILLQATCILESKDSNSCAGHL*HTSLDA
Trigger: AGCATCTAGACTTGTATGCAAGAGATGGCCTGCGCA...TGAGTTTGAATCCTTGCTCTCTAGGATGCAGGTGGCTTGAAGCAGAATGCCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp TGTGGCATTCTGCTTCAAGCCACCTGCATCCTAGAGAGCAAGGATTCAAACTCATCGCTTACAACCTTCTaGGCAATGCATAGTGTGCGC +
Preference number: 5 (lower is better)
Translates to: CGILLQATCILESKDSNSSLTTF*AMHSVR
Trigger: GCGCACACTATGCATTGCCAAGAAGGTTGTAAGCGA...TGAGTTTGAATCCTTGCTCTCTAGGATGCAGGTGGCTTGAAGCAGAATGCCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp TCTTTTCCCTGTGAAGTGACACTTGCTCTGACTCTAACTGATGCAGGCCAGTGTACGAGCAGCAACTTCTaGAGATGCTTAAAGCGGGTG +
Preference number: 5 (lower is better)
Translates to: SFPCEVTLALTLTDAGQCTSSNF*RCLKRV
Trigger: CACCCGCTTTAAGCATCTCAAGAAGTTGCTGCTCGT...ACACTGGCCTGCATCAGTTAGAGTCAGAGCAAGTGTCACTTCACAGGGAAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp ACCAACTCGCTGTGCCTGGAAGGGATGTTAACCCCGATTCAGCCATTACTGCAATCTGCAGAGATGTCTTaGTCAAGGACTCCAAAGACA +
Preference number: 5 (lower is better)
Translates to: TNSLCLEGMLTPIQPLLQSAEMS*SRTPKT
Trigger: TGTCTTTGGAGTCCTTGACAAAGACATCTCTGCAGA...TTGCAGTAATGGCTGAATCGGGGTTAACATCCCTTCCAGGCACAGCGAGTTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp CAATTCACATCATCATCACTTTGCCAGGTATGTGTACCTGCCCCTTATTGGGCAGAGTTCTGGCCACTCTaGTATAGCTCAGGCAATGCC +
Preference number: 5 (lower is better)
Translates to: QFTSSSLCQVCVPAPYWAEFWPL*YSSGNA
Trigger: GGCATTGCCTGAGCTATACAAGAGTGGCCAGAACTC...TGCCCAATAAGGGGCAGGTACACATACCTGGCAAAGTGATGATGATGTGAATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp TCTTTTCCCTGTGAAGTGACACTTGCTCTGACTCTAACTGATGCAGGCCAGTGTGTGAGGGAGATGGTGTaGATTGGTGTCCCAAAGGTA +
Preference number: 5 (lower is better)
Translates to: SFPCEVTLALTLTDAGQCVREMV*IGVPKV
Trigger: TACCTTTGGGACACCAATCAACACCATCTCCCTCAC...ACACTGGCCTGCATCAGTTAGAGTCAGAGCAAGTGTCACTTCACAGGGAAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp GCTGGTGGCATGACTCGTAGGCTCAAAGACTCACCACACTTATTGCATCTATTTTGTACCTGCCCCTTATaGGGCAATCCTCATGCAGGA +
Preference number: 5 (lower is better)
Translates to: AGGMTRRLKDSPHLLHLFCTCPL*GNPHAG
Trigger: TCCTGCATGAGGATTGCCCAATAAGGGGCAGGTACA...AAATAGATGCAATAAGTGTGGTGAGTCTTTGAGCCTACGAGTCATGCCACCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp TGTGGCATTCTGCTTCAAGCCACCTGCATCCTAGAGAGCAAGGATTCAAACTCACCTGAGATCCAAGTTTaGACTCAATCCCCTCACTGG +
Preference number: 5 (lower is better)
Translates to: CGILLQATCILESKDSNSPEIQV*TQSPHW
Trigger: CCAGTGAGGGGATTGAGTCAAAACTTGGATCTCAGG...TGAGTTTGAATCCTTGCTCTCTAGGATGCAGGTGGCTTGAAGCAGAATGCCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp GCTGTGCCTGGAAGGGATGTTAACCCCGATTCAGCCATTACTGCAATACACTTGAGAGTAGGTGACCAGTaGTACCAGTTGCTCCAGTTT +
Preference number: 5 (lower is better)
Translates to: AVPGRDVNPDSAITAIHLRVGDQ*YQLLQF
Trigger: AAACTGGAGCAACTGGTACAACTGGTCACCTACTCT...CAAGTGTATTGCAGTAATGGCTGAATCGGGGTTAACATCCCTTCCAGGCACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS TCA 90 bp TACTGGATCTGGCCCAAGTCCTCTGCGATGTTGAGGGCTCGACATTaGATGGATAAATCGGTCTCTTCATCATACAGGTCAAGGTCATTG +
Preference number: 5 (lower is better)
Translates to: YWIWPKSSAMLRARH*MDKSVSSSYRSRSL
Trigger: CAATGACCTTGACCTGTATGATGAAGAGACCGATTTATCCATTCAATGTCGAGCCCTCAACATCGCAGAGGACTTGGGCCAGATCCAGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000326831.7
ENST00000327245.10
ENST00000517802.5
ENST00000520108.1
ENST00000521033.5
ENST00000642502.1
CDS GCA 90 bp GTCTCTTCATCATACAGGTCAAGGTCATTGCTCAAGAAGAACACTTaGCCGAGCTTCACCAGCTCAATGGAGACATACAAAGAGATGGGG +
Preference number: 5 (lower is better)
Translates to: VSSSYRSRSLLKKNT*PSFTSSMETYKEMG
Trigger: CCCCATCTCTTTGTATGTCTCCATTGAGCTGGTGAAGCTCGGGCAAGTGTTCTTCTTGAGCAATGACCTTGACCTGTATGATGAAGAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326831.7
ENST00000327245.10
ENST00000517802.5
ENST00000521033.5
ENST00000642502.1
CDS CCA 90 bp AATTTGTTGAGGTGGTTGTTGGGTTTCTCACACACGATGGTATTGTaGAAAAGCTCTGGTTCGAACTGTACCTCCTGCTGTGAGAAGCCC +
Preference number: 5 (lower is better)
Translates to: NLLRWLLGFSHTMVL*KSSGSNCTSCCEKP
Trigger: GGGCTTCTCACAGCAGGAGGTACAGTTCGAACCAGAGCTTTTCCACAATACCATCGTGTGTGAGAAACCCAACAACCACCTCAACAAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326831.7
ENST00000327245.10
ENST00000517802.5
ENST00000521033.5
ENST00000642502.1
CDS-3UTR CAA 90 bp GCTGTGCCTGGAAGGGATGTTAACCCCGATTCAGCCATTACTGCAATACACTTGTCAGGCTGGAAAGCATaGACCACAGGGATAAAATTC +
Preference number: 5 (lower is better)
Translates to: AVPGRDVNPDSAITAIHLSGWKA*TTGIKF
Trigger: GAATTTTATCCCTGTGGTCAATGCTTTCCAGCCTGA...CAAGTGTATTGCAGTAATGGCTGAATCGGGGTTAACATCCCTTCCAGGCACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642502.1
CDS-3UTR CAA 90 bp TCTTTTCCCTGTGAAGTGACACTTGCTCTGACTCTAACTGATGCAGGCCAGTGTCTCATTGCATTTCATTaGGATGAAGTCTCCCACGCG +
Preference number: 5 (lower is better)
Translates to: SFPCEVTLALTLTDAGQCLIAFH*DEVSHA
Trigger: CGCGTGGGAGACTTCATCCAAATGAAATGCAATGAG...ACACTGGCCTGCATCAGTTAGAGTCAGAGCAAGTGTCACTTCACAGGGAAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp TGTGGCATTCTGCTTCAAGCCACCTGCATCCTAGAGAGCAAGGATTCAAACTCACTTCACGACACATCTTaGCTTGAGGTTTGTCTCTCC +
Preference number: 5 (lower is better)
Translates to: CGILLQATCILESKDSNSLHDTS*LEVCLS
Trigger: GGAGAGACAAACCTCAAGCAAAGATGTGTCGTGAAG...TGAGTTTGAATCCTTGCTCTCTAGGATGCAGGTGGCTTGAAGCAGAATGCCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp TGTGGCATTCTGCTTCAAGCCACCTGCATCCTAGAGAGCAAGGATTCAAACTCATCACACACGATGGTATaGTGGAAAAGCTCTGGTTCG +
Preference number: 5 (lower is better)
Translates to: CGILLQATCILESKDSNSSHTMV*WKSSGS
Trigger: CGAACCAGAGCTTTTCCACAATACCATCGTGTGTGA...TGAGTTTGAATCCTTGCTCTCTAGGATGCAGGTGGCTTGAAGCAGAATGCCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp ACATCATCATCACTTTGCCAGGTATGTGTACCTGCCCCTTATTGGGCAATCCTCTTGTTGAGGTGGTTGTaGGGTTTCTCACACACGATG +
Preference number: 5 (lower is better)
Translates to: TSSSLCQVCVPAPYWAILLLRWL*GFSHTM
Trigger: CATCGTGTGTGAGAAACCCAACAACCACCTCAACAA...GAGGATTGCCCAATAAGGGGCAGGTACACATACCTGGCAAAGTGATGATGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp GACTTAATACCTATGTCAAGCCTGGGAAGAAAGGCAGTTCTAATCAACTTGCAGGCTCAAGAAGAACACTaGCCCGAGCTTCACCAGCTC +
Preference number: 5 (lower is better)
Translates to: DLIPMSSLGRKAVLINLQAQEEH*PELHQL
Trigger: GAGCTGGTGAAGCTCGGGCAAGTGTTCTTCTTGAGC...CTGCAAGTTGATTAGAACTGCCTTTCTTCCCAGGCTTGACATAGGTATTAAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp TTACAGGCAAAAAGCAGAACCAACTCGCTGTGCCTGGAAGGGATGTTAACCCCGCTCCTTCCCTCCTTTTaGAAGTCTCAGTGTTTATTG +
Preference number: 5 (lower is better)
Translates to: LQAKSRTNSLCLEGMLTPLLPSF*KSQCLL
Trigger: CAATAAACACTGAGACTTCAAAAAGGAGGGAAGGAG...CGGGGTTAACATCCCTTCCAGGCACAGCGAGTTGGTTCTGCTTTTTGCCTGTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327245.10
CDS-3UTR CAA 90 bp CAATTCACATCATCATCACTTTGCCAGGTATGTGTACCTGCCCCTTATTGGGCAAGAGGGTGTATTTGGTaGTGCAGGTTCTGTTGCCAG +
Preference number: 5 (lower is better)
Translates to: QFTSSSLCQVCVPAPYWARGCIW*CRFCCQ
Trigger: CTGGCAACAGAACCTGCACAACCAAATACACCCTCT...TGCCCAATAAGGGGCAGGTACACATACCTGGCAAAGTGATGATGATGTGAATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327245.10
CDS-3UTR CAA 90 bp GCTGGTGGCATGACTCGTAGGCTCAAAGACTCACCACACTTATTGCATCTATTTTCCTCCATGCCATCCTaGATCATGATGACGAACAGG +
Preference number: 5 (lower is better)
Translates to: AGGMTRRLKDSPHLLHLFSSMPS*IMMTNR
Trigger: CCTGTTCGTCATCATGATCAAGGATGGCATGGAGGA...AAATAGATGCAATAAGTGTGGTGAGTCTTTGAGCCTACGAGTCATGCCACCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327245.10
CDS-3UTR CAA 90 bp TTTCTTTGGCTTACAGGCAAAAAGCAGAACCAACTCGCTGTGCCTGGAAGGGATTCGCTTAGCATTTTCTaGGTGAGAATACTCGCTGCC +
Preference number: 5 (lower is better)
Translates to: FLWLTGKKQNQLAVPGRDSLSIF*VRILAA
Trigger: GGCAGCGAGTATTCTCACCAAGAAAATGCTAAGCGA...ATCCCTTCCAGGCACAGCGAGTTGGTTCTGCTTTTTGCCTGTAAGCCAAAGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp TCTTTTCCCTGTGAAGTGACACTTGCTCTGACTCTAACTGATGCAGGCCAGTGTTCGCTTAGCATTTTCTaGGTGAGAATACTCGCTGCC +
Preference number: 5 (lower is better)
Translates to: SFPCEVTLALTLTDAGQCSLSIF*VRILAA
Trigger: GGCAGCGAGTATTCTCACCAAGAAAATGCTAAGCGA...ACACTGGCCTGCATCAGTTAGAGTCAGAGCAAGTGTCACTTCACAGGGAAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp TTTTACAAGACTAGGGTTAGGCTATACTTGCCCACAGCAGACCTGGCTTCTTTGGACACCATGACAGAGTaGCAGATGGTTAAGGCAAGG +
Preference number: 5 (lower is better)
Translates to: FYKTRVRLYLPTADLASLDTMTE*QMVKAR
Trigger: CCTTGCCTTAACCATCTGCAACTCTGTCATGGTGTC...CAAAGAAGCCAGGTCTGCTGTGGGCAAGTATAGCCTAACCCTAGTCTTGTAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp TTTCTTTGGCTTACAGGCAAAAAGCAGAACCAACTCGCTGTGCCTGGAAGGGATTTGTCTCGCACCAGCTaGACTATCATACTCTTCTGG +
Preference number: 5 (lower is better)
Translates to: FLWLTGKKQNQLAVPGRDLSRTS*TIILFW
Trigger: CCAGAAGAGTATGATAGTCAAGCTGGTGCGAGACAA...ATCCCTTCCAGGCACAGCGAGTTGGTTCTGCTTTTTGCCTGTAAGCCAAAGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp TTGCTCCAGTTTCCTAGGATTTGGGACTCTGTAAAAATGAGAAAGTCCCAGGCAGGTAGAAAGTGGGGTTaGAGAGCTGGCCTTCCATCA +
Preference number: 5 (lower is better)
Translates to: LLQFPRIWDSVKMRKSQAGRKWG*RAGLPS
Trigger: TGATGGAAGGCCAGCTCTCAAACCCCACTTTCTACC...TGCCTGGGACTTTCTCATTTTTACAGAGTCCCAAATCCTAGGAAACTGGAGCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp TTACAGGCAAAAAGCAGAACCAACTCGCTGTGCCTGGAAGGGATGTTAACCCCGACAGGAAAAAGTATCTaGGGAGAAGAGCAACAACTG +
Preference number: 5 (lower is better)
Translates to: LQAKSRTNSLCLEGMLTPTGKSI*GEEQQL
Trigger: CAGTTGTTGCTCTTCTCCCAAGATACTTTTTCCTGT...CGGGGTTAACATCCCTTCCAGGCACAGCGAGTTGGTTCTGCTTTTTGCCTGTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp GCTGTGCCTGGAAGGGATGTTAACCCCGATTCAGCCATTACTGCAATACACTTGACTAGGTGGCCTCTGTaGAGTTTGTACAGATTTCTG +
Preference number: 5 (lower is better)
Translates to: AVPGRDVNPDSAITAIHLTRWPL*SLYRFL
Trigger: CAGAAATCTGTACAAACTCAACAGAGGCCACCTAGT...CAAGTGTATTGCAGTAATGGCTGAATCGGGGTTAACATCCCTTCCAGGCACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp TCACTTTGCCAGGTATGTGTACCTGCCCCTTATTGGGCAATCCTCATGCAGGATCCATATCCTGAGATATaGCCTGGGTTGATACACTTC +
Preference number: 5 (lower is better)
Translates to: SLCQVCVPAPYWAILMQDPYPEI*PGLIHF
Trigger: GAAGTGTATCAACCCAGGCAATATCTCAGGATATGG...ATCCTGCATGAGGATTGCCCAATAAGGGGCAGGTACACATACCTGGCAAAGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp TGTGGCATTCTGCTTCAAGCCACCTGCATCCTAGAGAGCAAGGATTCAAACTCATGCACCCGTTCCCTTTaGCATGTCTATTCTTCATGC +
Preference number: 5 (lower is better)
Translates to: CGILLQATCILESKDSNSCTRSL*HVYSSC
Trigger: GCATGAAGAATAGACATGCAAAAGGGAACGGGTGCA...TGAGTTTGAATCCTTGCTCTCTAGGATGCAGGTGGCTTGAAGCAGAATGCCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp TCTTTTCCCTGTGAAGTGACACTTGCTCTGACTCTAACTGATGCAGGCCAGTGTTGCACCCGTTCCCTTTaGCATGTCTATTCTTCATGC +
Preference number: 5 (lower is better)
Translates to: SFPCEVTLALTLTDAGQCCTRSL*HVYSSC
Trigger: GCATGAAGAATAGACATGCAAAAGGGAACGGGTGCA...ACACTGGCCTGCATCAGTTAGAGTCAGAGCAAGTGTCACTTCACAGGGAAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp CTTTTTGCCTACTATATAGGTACTAGCTTAAGGTGGCTCAGTAACCCTTTCTGGCCTTCCAGTCCAGGTTaGCCAGGAAGATGGTCAGAG +
Preference number: 5 (lower is better)
Translates to: LFAYYIGTSLRWLSNPFWPSSPG*PGRWSE
Trigger: CTCTGACCATCTTCCTGGCAAACCTGGACTGGAAGG...CCAGAAAGGGTTACTGAGCCACCTTAAGCTAGTACCTATATAGTAGGCAAAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp CTGGTGCACCCGTTCCCTTTTGCATGTCTATTCTTCATGCCTCTTACACTAGCTCACATCATCATCACTTaGCCAGGTATGTGTACCTGC +
Preference number: 5 (lower is better)
Translates to: LVHPFPFACLFFMPLTLAHIIIT*PGMCTC
Trigger: GCAGGTACACATACCTGGCAAAGTGATGATGATGTG...AGCTAGTGTAAGAGGCATGAAGAATAGACATGCAAAAGGGAACGGGTGCACCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp TTTCTTTGGCTTACAGGCAAAAAGCAGAACCAACTCGCTGTGCCTGGAAGGGATGCAGTTCTAATCAACTaGCAGGTGTGGCATTCTGCT +
Preference number: 5 (lower is better)
Translates to: FLWLTGKKQNQLAVPGRDAVLIN*QVWHSA
Trigger: AGCAGAATGCCACACCTGCAAGTTGATTAGAACTGC...ATCCCTTCCAGGCACAGCGAGTTGGTTCTGCTTTTTGCCTGTAAGCCAAAGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS GCA 90 bp CGGAATCCAAAGAGCTTGCGGTCTGGCTTCTGTAGTTCACGAAATTaGTTTAGCTCTTCCAATGCACAATTGAGGATGGATTCACAGGTC +
Preference number: 5 (lower is better)
Translates to: RNPKSLRSGFCSSRN*FSSSNAQLRMDSQV
Trigger: GACCTGTGAATCCATCCTCAATTGTGCATTGGAAGAGCTAAAGCAATTTCGTGAACTACAGAAGCCAGACCGCAAGCTCTTTGGATTCCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS CCA 90 bp CATTGCCTGGTGCAAAAGGATTGTGGTGAGGGAGATGGTGTTGATTaGTGTCCCAAAGGTAAAGACATCTATATCAGAGCCCTTATAGGC +
Preference number: 5 (lower is better)
Translates to: HCLVQKDCGEGDGVD*CPKGKDIYIRALIG
Trigger: GCCTATAAGGGCTCTGATATAGATGTCTTTACCTTTGGGACACCAATCAACACCATCTCCCTCACCACAATCCTTTTGCACCAGGCAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp TCACTTTGCCAGGTATGTGTACCTGCCCCTTATTGGGCAATCCTCATGCAGGATACCACTACTCGCTTCTaGTCTTCTTTTCTTTTCCAC +
Preference number: 5 (lower is better)
Translates to: SLCQVCVPAPYWAILMQDTTTRF*SSFLFH
Trigger: GTGGAAAAGAAAAGAAGACAAGAAGCGAGTAGTGGT...ATCCTGCATGAGGATTGCCCAATAAGGGGCAGGTACACATACCTGGCAAAGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000642502.1
CDS-3UTR CAA 90 bp CAATTCACATCATCATCACTTTGCCAGGTATGTGTACCTGCCCCTTATTGGGCAACGACACATCTTTGCTaGAGGTTTGTCTCTCCATCC +
Preference number: 5 (lower is better)
Translates to: QFTSSSLCQVCVPAPYWATTHLC*RFVSPS
Trigger: GGATGGAGAGACAAACCTCAAGCAAAGATGTGTCGT...TGCCCAATAAGGGGCAGGTACACATACCTGGCAAAGTGATGATGATGTGAATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp TTTTACAAGACTAGGGTTAGGCTATACTTGCCCACAGCAGACCTGGCTTCTTTGCTTCACGACACATCTTaGCTTGAGGTTTGTCTCTCC +
Preference number: 5 (lower is better)
Translates to: FYKTRVRLYLPTADLASLLHDTS*LEVCLS
Trigger: GGAGAGACAAACCTCAAGCAAAGATGTGTCGTGAAG...CAAAGAAGCCAGGTCTGCTGTGGGCAAGTATAGCCTAACCCTAGTCTTGTAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp GCTGGTGGCATGACTCGTAGGCTCAAAGACTCACCACACTTATTGCATCTATTTTCACACACGATGGTATaGTGGAAAAGCTCTGGTTCG +
Preference number: 5 (lower is better)
Translates to: AGGMTRRLKDSPHLLHLFSHTMV*WKSSGS
Trigger: CGAACCAGAGCTTTTCCACAATACCATCGTGTGTGA...AAATAGATGCAATAAGTGTGGTGAGTCTTTGAGCCTACGAGTCATGCCACCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp AAGAATGGCTTTGGTCTAAACCGATTTGAGAACTCGATTCAACAAAAACAGCCTCGTCGGAACACCATCTaGTTCTCTGTCAGGGTCCCC +
Preference number: 5 (lower is better)
Translates to: KNGFGLNRFENSIQQKQPRRNTI*FSVRVP
Trigger: GGGGACCCTGACAGAGAACAAGATGGTGTTCCGACG...AGGCTGTTTTTGTTGAATCGAGTTCTCAAATCGGTTTAGACCAAAGCCATTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp TATCTGTGGGGAAATGGGGAGACTAGACCAATAGTAGAATTTGGGAGAGGTAAAGGACAGGCATTGGTATaGGGTCCACTCTTCACCATC +
Preference number: 5 (lower is better)
Translates to: YLWGNGETRPIVEFGRGKGQALV*GPLFTI
Trigger: GATGGTGAAGAGTGGACCCAATACCAATGCCTGTCC...TTTACCTCTCCCAAATTCTACTATTGGTCTAGTCTCCCCATTTCCCCACAGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520108.1
CDS-3UTR CAA 90 bp TTGCTCCAGTTTCCTAGGATTTGGGACTCTGTAAAAATGAGAAAGTCCCAGGCATGCGCAGGCCATCTCTaGCATACAAGTCTAGATGCT +
Preference number: 5 (lower is better)
Translates to: LLQFPRIWDSVKMRKSQACAGHL*HTSLDA
Trigger: AGCATCTAGACTTGTATGCAAGAGATGGCCTGCGCA...TGCCTGGGACTTTCTCATTTTTACAGAGTCCCAAATCCTAGGAAACTGGAGCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp CTTTTTGCCTACTATATAGGTACTAGCTTAAGGTGGCTCAGTAACCCTTTCTGGCAGGAATGGGCAATGTaGACCGCTGTCTCCTGCTTA +
Preference number: 5 (lower is better)
Translates to: LFAYYIGTSLRWLSNPFWQEWAM*TAVSCL
Trigger: TAAGCAGGAGACAGCGGTCAACATTGCCCATTCCTG...CCAGAAAGGGTTACTGAGCCACCTTAAGCTAGTACCTATATAGTAGGCAAAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp AAAGAGCAGCATCAGAGTGTTGGCTATAGTTTGGAACTTAGGAACAGGATCAGACGGAATCCAAAGAGCTaGCGGTCTGGCTTCTGTAGT +
Preference number: 5 (lower is better)
Translates to: KEQHQSVGYSLELRNRIRRNPKS*RSGFCS
Trigger: ACTACAGAAGCCAGACCGCAAGCTCTTTGGATTCCG...TCTGATCCTGTTCCTAAGTTCCAAACTATAGCCAACACTCTGATGCTGCTCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp TTTTACAAGACTAGGGTTAGGCTATACTTGCCCACAGCAGACCTGGCTTCTTTGTTGTCTCGCACCAGCTaGACTATCATACTCTTCTGG +
Preference number: 5 (lower is better)
Translates to: FYKTRVRLYLPTADLASLLSRTS*TIILFW
Trigger: CCAGAAGAGTATGATAGTCAAGCTGGTGCGAGACAA...CAAAGAAGCCAGGTCTGCTGTGGGCAAGTATAGCCTAACCCTAGTCTTGTAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp ACCAACTCGCTGTGCCTGGAAGGGATGTTAACCCCGATTCAGCCATTACTGCAACAATTTTCTGAGCTTTaGAGATTAGAGACTTCCCAC +
Preference number: 5 (lower is better)
Translates to: TNSLCLEGMLTPIQPLLQQFSEL*RLETSH
Trigger: GTGGGAAGTCTCTAATCTCAAAAGCTCAGAAAATTG...TTGCAGTAATGGCTGAATCGGGGTTAACATCCCTTCCAGGCACAGCGAGTTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp TTTTACAAGACTAGGGTTAGGCTATACTTGCCCACAGCAGACCTGGCTTCTTTGTGGCCTCTGTTGAGTTaGTACAGATTTCTGCAGCTC +
Preference number: 5 (lower is better)
Translates to: FYKTRVRLYLPTADLASLWPLLS*YRFLQL
Trigger: GAGCTGCAGAAATCTGTACAAACTCAACAGAGGCCA...CAAAGAAGCCAGGTCTGCTGTGGGCAAGTATAGCCTAACCCTAGTCTTGTAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp GGTGGCATGACTCGTAGGCTCAAAGACTCACCACACTTATTGCATCTATTTCTGTGTTTAAGCTCAGGGTaGCCCTATCATATGGGCCTA +
Preference number: 5 (lower is better)
Translates to: GGMTRRLKDSPHLLHLFLCLSSG*PYHMGL
Trigger: TAGGCCCATATGATAGGGCAACCCTGAGCTTAAACA...CAGAAATAGATGCAATAAGTGTGGTGAGTCTTTGAGCCTACGAGTCATGCCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp TTTTACAAGACTAGGGTTAGGCTATACTTGCCCACAGCAGACCTGGCTTCTTTGTGTTTAAGCTCAGGGTaGCCCTATCATATGGGCCTA +
Preference number: 5 (lower is better)
Translates to: FYKTRVRLYLPTADLASLCLSSG*PYHMGL
Trigger: TAGGCCCATATGATAGGGCAACCCTGAGCTTAAACA...CAAAGAAGCCAGGTCTGCTGTGGGCAAGTATAGCCTAACCCTAGTCTTGTAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp AGGCTATACTTGCCCACAGCAGACCTGGCTTCTTTGGACAGCCTATTAAAATTCCCCTTGAAGATGTCATaGTTTAAGCTCAGGGTTGCC +
Preference number: 5 (lower is better)
Translates to: RLYLPTADLASLDSLLKFPLKMS*FKLRVA
Trigger: GGCAACCCTGAGCTTAAACAATGACATCTTCAAGGG...GAATTTTAATAGGCTGTCCAAAGAAGCCAGGTCTGCTGTGGGCAAGTATAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp CTGGTGCACCCGTTCCCTTTTGCATGTCTATTCTTCATGCCTCTTACACTAGCTGCAGACCTGGCTTCTTaGGACAGCCTATTAAAATTC +
Preference number: 5 (lower is better)
Translates to: LVHPFPFACLFFMPLTLAADLAS*DSLLKF
Trigger: GAATTTTAATAGGCTGTCCAAAGAAGCCAGGTCTGC...AGCTAGTGTAAGAGGCATGAAGAATAGACATGCAAAAGGGAACGGGTGCACCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp TTTCTTTGGCTTACAGGCAAAAAGCAGAACCAACTCGCTGTGCCTGGAAGGGATGCAGACCTGGCTTCTTaGGACAGCCTATTAAAATTC +
Preference number: 5 (lower is better)
Translates to: FLWLTGKKQNQLAVPGRDADLAS*DSLLKF
Trigger: GAATTTTAATAGGCTGTCCAAAGAAGCCAGGTCTGC...ATCCCTTCCAGGCACAGCGAGTTGGTTCTGCTTTTTGCCTGTAAGCCAAAGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp CTTTTTGCCTACTATATAGGTACTAGCTTAAGGTGGCTCAGTAACCCTTTCTGGTGTACCTGCCCCTTATaGGGCAATCCTCATGCAGGA +
Preference number: 5 (lower is better)
Translates to: LFAYYIGTSLRWLSNPFWCTCPL*GNPHAG
Trigger: TCCTGCATGAGGATTGCCCAATAAGGGGCAGGTACA...CCAGAAAGGGTTACTGAGCCACCTTAAGCTAGTACCTATATAGTAGGCAAAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp AGGCTATACTTGCCCACAGCAGACCTGGCTTCTTTGGACAGCCTATTAAAATTCATGGTCACAGTTGGCTaGATTTACAGAGGGGCAAGA +
Preference number: 5 (lower is better)
Translates to: RLYLPTADLASLDSLLKFMVTVG*IYRGAR
Trigger: TCTTGCCCCTCTGTAAATCAAGCCAACTGTGACCAT...GAATTTTAATAGGCTGTCCAAAGAAGCCAGGTCTGCTGTGGGCAAGTATAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS CCA 90 bp ATGTCTGTCATTGCTTATGGAGGGCATTGCAACTTTGGATGTGGGTaGAAGTTCTCAGGGAGAAGTTTCTCCAACACTCTGGATATTTCC +
Preference number: 5 (lower is better)
Translates to: MSVIAYGGHCNFGCG*KFSGRSFSNTLDIS
Trigger: GGAAATATCCAGAGTGTTGGAGAAACTTCTCCCTGAGAACTTCCACCCACATCCAAAGTTGCAATGCCCTCCATAAGCAATGACAGACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517815.1
CDS CCA 90 bp CCTTATGTCTGTCATTGCTTATGGAGGGCATTGCAACTTTGGATGTaGGTGGAAGTTCTCAGGGAGAAGTTTCTCCAACACTCTGGATAT +
Preference number: 5 (lower is better)
Translates to: PYVCHCLWRALQLWM*VEVLREKFLQHSGY
Trigger: ATATCCAGAGTGTTGGAGAAACTTCTCCCTGAGAACTTCCACCCACATCCAAAGTTGCAATGCCCTCCATAAGCAATGACAGACATAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517815.1
CDS-3UTR CAA 90 bp AGGCTATACTTGCCCACAGCAGACCTGGCTTCTTTGGACAGCCTATTAAAATTCAATTTGTTGAGGTGGTaGTTGGGTTTCTCACACACG +
Preference number: 5 (lower is better)
Translates to: RLYLPTADLASLDSLLKFNLLRW*LGFSHT
Trigger: CGTGTGTGAGAAACCCAACAACCACCTCAACAAATT...GAATTTTAATAGGCTGTCCAAAGAAGCCAGGTCTGCTGTGGGCAAGTATAGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp GGTGGCATGACTCGTAGGCTCAAAGACTCACCACACTTATTGCATCTATTTCTGTACAGGTCAAGGTCATaGCTCAAGAAGAACACTTGC +
Preference number: 5 (lower is better)
Translates to: GGMTRRLKDSPHLLHLFLYRSRS*LKKNTC
Trigger: GCAAGTGTTCTTCTTGAGCAATGACCTTGACCTGTA...CAGAAATAGATGCAATAAGTGTGGTGAGTCTTTGAGCCTACGAGTCATGCCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp TCTTTTCCCTGTGAAGTGACACTTGCTCTGACTCTAACTGATGCAGGCCAGTGTGACCTCTTCCCAATCTaGATGGAATATGCTGTTGTT +
Preference number: 5 (lower is better)
Translates to: SFPCEVTLALTLTDAGQCDLFPI*MEYAVV
Trigger: AACAACAGCATATTCCATCAAGATTGGGAAGAGGTC...ACACTGGCCTGCATCAGTTAGAGTCAGAGCAAGTGTCACTTCACAGGGAAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327245.10
CDS-3UTR CAA 90 bp TCTTTTCCCTGTGAAGTGACACTTGCTCTGACTCTAACTGATGCAGGCCAGTGTTGTTGGAGCAGTTTATaGCTTTATCAAAGCGGTGTC +
Preference number: 5 (lower is better)
Translates to: SFPCEVTLALTLTDAGQCCWSSL*LYQSGV
Trigger: GACACCGCTTTGATAAAGCAATAAACTGCTCCAACA...ACACTGGCCTGCATCAGTTAGAGTCAGAGCAAGTGTCACTTCACAGGGAAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327245.10
CDS-3UTR CAA 90 bp TTTTACAAGACTAGGGTTAGGCTATACTTGCCCACAGCAGACCTGGCTTCTTTGGCAGCATCTCGAACCTaGGTCAGTAGGTTTTTATCT +
Preference number: 5 (lower is better)
Translates to: FYKTRVRLYLPTADLASLAASRT*VSRFLS
Trigger: AGATAAAAACCTACTGACCAAGGTTCGAGATGCTGC...CAAAGAAGCCAGGTCTGCTGTGGGCAAGTATAGCCTAACCCTAGTCTTGTAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp CTTTTTGCCTACTATATAGGTACTAGCTTAAGGTGGCTCAGTAACCCTTTCTGGGTGATGGATGGTGTCTaGGAAGGTAAGCGGAATCCA +
Preference number: 5 (lower is better)
Translates to: LFAYYIGTSLRWLSNPFWVMDGV*EGKRNP
Trigger: TGGATTCCGCTTACCTTCCAAGACACCATCCATCAC...CCAGAAAGGGTTACTGAGCCACCTTAAGCTAGTACCTATATAGTAGGCAAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp AAGAATGGCTTTGGTCTAAACCGATTTGAGAACTCGATTCAACAAAAACAGCCTGTCATGACGCGCAACTaGTCTCGCACCAGCTTGACT +
Preference number: 5 (lower is better)
Translates to: KNGFGLNRFENSIQQKQPVMTRN*SRTSLT
Trigger: AGTCAAGCTGGTGCGAGACAAGTTGCGCGTCATGAC...AGGCTGTTTTTGTTGAATCGAGTTCTCAAATCGGTTTAGACCAAAGCCATTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp CTGGTGCACCCGTTCCCTTTTGCATGTCTATTCTTCATGCCTCTTACACTAGCTATGTCTTCATTTCCATaGCCTGGTGCAAAAGGATTG +
Preference number: 5 (lower is better)
Translates to: LVHPFPFACLFFMPLTLAMSSFP*PGAKGL
Trigger: CAATCCTTTTGCACCAGGCAATGGAAATGAAGACAT...AGCTAGTGTAAGAGGCATGAAGAATAGACATGCAAAAGGGAACGGGTGCACCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp TCTTTTCCCTGTGAAGTGACACTTGCTCTGACTCTAACTGATGCAGGCCAGTGTACAGGAAAAAGTATCTaGGGAGAAGAGCAACAACTG +
Preference number: 5 (lower is better)
Translates to: SFPCEVTLALTLTDAGQCTGKSI*GEEQQL
Trigger: CAGTTGTTGCTCTTCTCCCAAGATACTTTTTCCTGT...ACACTGGCCTGCATCAGTTAGAGTCAGAGCAAGTGTCACTTCACAGGGAAAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp AAAGAGCAGCATCAGAGTGTTGGCTATAGTTTGGAACTTAGGAACAGGATCAGATCCACATGCTTCCTCTaGGGAGGGTTAGAGCTCTTT +
Preference number: 5 (lower is better)
Translates to: KEQHQSVGYSLELRNRIRSTCFL*GGLELF
Trigger: AAAGAGCTCTAACCCTCCCAAGAGGAAGCATGTGGA...TCTGATCCTGTTCCTAAGTTCCAAACTATAGCCAACACTCTGATGCTGCTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp TTGCTCCAGTTTCCTAGGATTTGGGACTCTGTAAAAATGAGAAAGTCCCAGGCATGGCCTCTGTTGAGTTaGTACAGATTTCTGCAGCTC +
Preference number: 5 (lower is better)
Translates to: LLQFPRIWDSVKMRKSQAWPLLS*YRFLQL
Trigger: GAGCTGCAGAAATCTGTACAAACTCAACAGAGGCCA...TGCCTGGGACTTTCTCATTTTTACAGAGTCCCAAATCCTAGGAAACTGGAGCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp GCTGGTGGCATGACTCGTAGGCTCAAAGACTCACCACACTTATTGCATCTATTTCCATATCCTGAGATATaGCCTGGGTTGATACACTTC +
Preference number: 5 (lower is better)
Translates to: AGGMTRRLKDSPHLLHLFPYPEI*PGLIHF
Trigger: GAAGTGTATCAACCCAGGCAATATCTCAGGATATGG...AAATAGATGCAATAAGTGTGGTGAGTCTTTGAGCCTACGAGTCATGCCACCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp TTGCTCCAGTTTCCTAGGATTTGGGACTCTGTAAAAATGAGAAAGTCCCAGGCACCCTTGAAGATGTCATaGTTTAAGCTCAGGGTTGCC +
Preference number: 5 (lower is better)
Translates to: LLQFPRIWDSVKMRKSQAPLKMS*FKLRVA
Trigger: GGCAACCCTGAGCTTAAACAATGACATCTTCAAGGG...TGCCTGGGACTTTCTCATTTTTACAGAGTCCCAAATCCTAGGAAACTGGAGCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp TTTTACAAGACTAGGGTTAGGCTATACTTGCCCACAGCAGACCTGGCTTCTTTGTGTTTTCTGGCATCTTaGCTGAGGAGGTTCTCAAGT +
Preference number: 5 (lower is better)
Translates to: FYKTRVRLYLPTADLASLCFLAS*LRRFSS
Trigger: ACTTGAGAACCTCCTCAGCAAAGATGCCAGAAAACA...CAAAGAAGCCAGGTCTGCTGTGGGCAAGTATAGCCTAACCCTAGTCTTGTAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp GACTTAATACCTATGTCAAGCCTGGGAAGAAAGGCAGTTCTAATCAACTTGCAGCCTGAGATCCAAGTTTaGACTCAATCCCCTCACTGG +
Preference number: 5 (lower is better)
Translates to: DLIPMSSLGRKAVLINLQPEIQV*TQSPHW
Trigger: CCAGTGAGGGGATTGAGTCAAAACTTGGATCTCAGG...CTGCAAGTTGATTAGAACTGCCTTTCTTCCCAGGCTTGACATAGGTATTAAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp TGTGGCATTCTGCTTCAAGCCACCTGCATCCTAGAGAGCAAGGATTCAAACTCAAAATTGGGGGAAAAATaGAGGTACCTGAGATCCAAG +
Preference number: 5 (lower is better)
Translates to: CGILLQATCILESKDSNSKLGEK*RYLRSK
Trigger: CTTGGATCTCAGGTACCTCAATTTTTCCCCCAATTT...TGAGTTTGAATCCTTGCTCTCTAGGATGCAGGTGGCTTGAAGCAGAATGCCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS GCA 90 bp ATAGGCCAGGTAAGGGATAAAGAAACAGATGAGGCTCTGGTAGAATaGATCCACCATAGAAATCCAGAAAGTCGACAGGTTATAGCACTC +
Preference number: 5 (lower is better)
Translates to: IGQVRDKETDEALVE*IHHRNPESRQVIAL
Trigger: GAGTGCTATAACCTGTCGACTTTCTGGATTTCTATGGTGGATGCATTCTACCAGAGCCTCATCTGTTTCTTTATCCCTTACCTGGCCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS CCA 90 bp AAATGTCCTTATGTCTGTCATTGCTTATGGAGGGCATTGCAACTTTaGATGTGGGTGGAAGTTCTCAGGGAGAAGTTTCTCCAACACTCT +
Preference number: 5 (lower is better)
Translates to: KCPYVCHCLWRALQL*MWVEVLREKFLQHS
Trigger: AGAGTGTTGGAGAAACTTCTCCCTGAGAACTTCCACCCACATCCAAAGTTGCAATGCCCTCCATAAGCAATGACAGACATAAGGACATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517815.1
CDS-3UTR CAA 90 bp GGTGGCATGACTCGTAGGCTCAAAGACTCACCACACTTATTGCATCTATTTCTGAGGCACTCTCGGTTATaGATGACTTTATCCGATTTG +
Preference number: 5 (lower is better)
Translates to: GGMTRRLKDSPHLLHLFLRHSRL*MTLSDL
Trigger: CAAATCGGATAAAGTCATCAATAACCGAGAGTGCCT...CAGAAATAGATGCAATAAGTGTGGTGAGTCTTTGAGCCTACGAGTCATGCCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642502.1
CDS-3UTR CAA 90 bp CTTTTTGCCTACTATATAGGTACTAGCTTAAGGTGGCTCAGTAACCCTTTCTGGCTCATTGCATTTCATTaGGATGAAGTCTCCCACGCG +
Preference number: 5 (lower is better)
Translates to: LFAYYIGTSLRWLSNPFWLIAFH*DEVSHA
Trigger: CGCGTGGGAGACTTCATCCAAATGAAATGCAATGAG...CCAGAAAGGGTTACTGAGCCACCTTAAGCTAGTACCTATATAGTAGGCAAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp TGTGGCATTCTGCTTCAAGCCACCTGCATCCTAGAGAGCAAGGATTCAAACTCAACACTGTTGCTTTCATaGAAACAAATGTCACCAGTC +
Preference number: 5 (lower is better)
Translates to: CGILLQATCILESKDSNSTLLLS*KQMSPV
Trigger: GACTGGTGACATTTGTTTCAATGAAAGCAACAGTGT...TGAGTTTGAATCCTTGCTCTCTAGGATGCAGGTGGCTTGAAGCAGAATGCCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327245.10
CDS-3UTR CAA 90 bp AAGAATGGCTTTGGTCTAAACCGATTTGAGAACTCGATTCAACAAAAACAGCCTGGACAGGCATTGGTATaGGGTCCACTCTTCACCATC +
Preference number: 5 (lower is better)
Translates to: KNGFGLNRFENSIQQKQPGQALV*GPLFTI
Trigger: GATGGTGAAGAGTGGACCCAATACCAATGCCTGTCC...AGGCTGTTTTTGTTGAATCGAGTTCTCAAATCGGTTTAGACCAAAGCCATTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp TGTTATAGGGGAATAGTGGTTATAACTTTTCCCTGTAAGATGGCACATTGGATGCGAGAAGGACAGGCATaGGTATTGGGTCCACTCTTC +
Preference number: 5 (lower is better)
Translates to: CYRGIVVITFPCKMAHWMREGQA*VLGPLF
Trigger: GAAGAGTGGACCCAATACCAATGCCTGTCCTTCTCG...CATCCAATGTGCCATCTTACAGGGAAAAGTTATAACCACTATTCCCCTATAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp TTGCTCCAGTTTCCTAGGATTTGGGACTCTGTAAAAATGAGAAAGTCCCAGGCATCTTCCAATGCACAATaGAGGATGGATTCACAGGTC +
Preference number: 5 (lower is better)
Translates to: LLQFPRIWDSVKMRKSQASSNAQ*RMDSQV
Trigger: GACCTGTGAATCCATCCTCAATTGTGCATTGGAAGA...TGCCTGGGACTTTCTCATTTTTACAGAGTCCCAAATCCTAGGAAACTGGAGCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp GCTGTGCCTGGAAGGGATGTTAACCCCGATTCAGCCATTACTGCAATACACTTGTCCAATATCAGCAGCTaGAATCATGCTTACATCATT +
Preference number: 5 (lower is better)
Translates to: AVPGRDVNPDSAITAIHLSNISS*NHAYII
Trigger: AATGATGTAAGCATGATTCAAGCTGCTGATATTGGA...CAAGTGTATTGCAGTAATGGCTGAATCGGGGTTAACATCCCTTCCAGGCACAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp TGTTATAGGGGAATAGTGGTTATAACTTTTCCCTGTAAGATGGCACATTGGATGGGTAGAAAGTGGGGTTaGAGAGCTGGCCTTCCATCA +
Preference number: 5 (lower is better)
Translates to: CYRGIVVITFPCKMAHWMGRKWG*RAGLPS
Trigger: TGATGGAAGGCCAGCTCTCAAACCCCACTTTCTACC...CATCCAATGTGCCATCTTACAGGGAAAAGTTATAACCACTATTCCCCTATAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp TTTCTTTGGCTTACAGGCAAAAAGCAGAACCAACTCGCTGTGCCTGGAAGGGATCAATTTTCTGAGCTTTaGAGATTAGAGACTTCCCAC +
Preference number: 5 (lower is better)
Translates to: FLWLTGKKQNQLAVPGRDQFSEL*RLETSH
Trigger: GTGGGAAGTCTCTAATCTCAAAAGCTCAGAAAATTG...ATCCCTTCCAGGCACAGCGAGTTGGTTCTGCTTTTTGCCTGTAAGCCAAAGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp GCTGTGCCTGGAAGGGATGTTAACCCCGATTCAGCCATTACTGCAATACACTTGCCATGGAAGTCAAGGTaGTTGAAGAAAAGAATAAGA +
Preference number: 5 (lower is better)
Translates to: AVPGRDVNPDSAITAIHLPWKSR*LKKRIR
Trigger: TCTTATTCTTTTCTTCAACAACCTTGACTTCCATGG...CAAGTGTATTGCAGTAATGGCTGAATCGGGGTTAACATCCCTTCCAGGCACAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp ACATCATCATCACTTTGCCAGGTATGTGTACCTGCCCCTTATTGGGCAATCCTCGAGATATTGCCTGGGTaGATACACTTCTTGAATCTT +
Preference number: 5 (lower is better)
Translates to: TSSSLCQVCVPAPYWAILEILPG*IHFLNL
Trigger: AAGATTCAAGAAGTGTATCAACCCAGGCAATATCTC...GAGGATTGCCCAATAAGGGGCAGGTACACATACCTGGCAAAGTGATGATGATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp GCTGTGCCTGGAAGGGATGTTAACCCCGATTCAGCCATTACTGCAATACACTTGGACTCACCACACTTATaGCATCTATTTCTGTACTTT +
Preference number: 5 (lower is better)
Translates to: AVPGRDVNPDSAITAIHLDSPHL*HLFLYF
Trigger: AAAGTACAGAAATAGATGCAATAAGTGTGGTGAGTC...CAAGTGTATTGCAGTAATGGCTGAATCGGGGTTAACATCCCTTCCAGGCACAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp TTGCTCCAGTTTCCTAGGATTTGGGACTCTGTAAAAATGAGAAAGTCCCAGGCATGTTTTCTGGCATCTTaGCTGAGGAGGTTCTCAAGT +
Preference number: 5 (lower is better)
Translates to: LLQFPRIWDSVKMRKSQACFLAS*LRRFSS
Trigger: ACTTGAGAACCTCCTCAGCAAAGATGCCAGAAAACA...TGCCTGGGACTTTCTCATTTTTACAGAGTCCCAAATCCTAGGAAACTGGAGCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp GGTGGCATGACTCGTAGGCTCAAAGACTCACCACACTTATTGCATCTATTTCTGAGCAGCATCAGAGTGTaGGCTATAGTTTGGAACTTA +
Preference number: 5 (lower is better)
Translates to: GGMTRRLKDSPHLLHLFLSSIRV*AIVWNL
Trigger: TAAGTTCCAAACTATAGCCAACACTCTGATGCTGCT...CAGAAATAGATGCAATAAGTGTGGTGAGTCTTTGAGCCTACGAGTCATGCCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp TTTCCTTATCTGTGGGGAAATGGGGAGACTAGACCAATAGTAGAATTTGGGAGACTCTTGGTTGAGGGGTaGCTCTACACGTTGATATCT +
Preference number: 5 (lower is better)
Translates to: FPYLWGNGETRPIVEFGRLLVEG*LYTLIS
Trigger: AGATATCAACGTGTAGAGCAACCCCTCAACCAAGAG...TCTCCCAAATTCTACTATTGGTCTAGTCTCCCCATTTCCCCACAGATAAGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000520108.1
CDS TCA 90 bp CCATTTCCAGCAGCAGGCGAAGATTCTTCACACTGTTGCTTTCATTaGAACAAATGTCACCAGTCGGTTCTGATTCTCTTGTCAAAGGAA +
Preference number: 5 (lower is better)
Translates to: PFPAAGEDSSHCCFH*NKCHQSVLILLSKE
Trigger: TTCCTTTGACAAGAGAATCAGAACCGACTGGTGACATTTGTTTCAATGAAAGCAACAGTGTGAAGAATCTTCGCCTGCTGCTGGAAATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518411.5
CDS GCA 90 bp ATGATTTCAAATGTCCTTATGTCTGTCATTGCTTATGGAGGGCATTaGAACTTTGGATGTGGGTGGAAGTTCTCAGGGAGAAGTTTCTCC +
Preference number: 5 (lower is better)
Translates to: MISNVLMSVIAYGGH*NFGCGWKFSGRSFS
Trigger: GGAGAAACTTCTCCCTGAGAACTTCCACCCACATCCAAAGTTGCAATGCCCTCCATAAGCAATGACAGACATAAGGACATTTGAAATCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517815.1
CDS CCA 90 bp TGCACATGTAAGTTTATTGCAGCACTGTTCACAATAGCAAAGACTTaGAACCAACCCCAGTGCCCATCAGCGATAGACTGGATAAAGAAA +
Preference number: 5 (lower is better)
Translates to: CTCKFIAALFTIAKT*NQPQCPSAIDWIKK
Trigger: TTTCTTTATCCAGTCTATCGCTGATGGGCACTGGGGTTGGTTCCAAGTCTTTGCTATTGTGAACAGTGCTGCAATAAACTTACATGTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326831.7
CDS-3UTR CAA 90 bp AAAGAGCAGCATCAGAGTGTTGGCTATAGTTTGGAACTTAGGAACAGGATCAGATACAGGTCAAGGTCATaGCTCAAGAAGAACACTTGC +
Preference number: 5 (lower is better)
Translates to: KEQHQSVGYSLELRNRIRYRSRS*LKKNTC
Trigger: GCAAGTGTTCTTCTTGAGCAATGACCTTGACCTGTA...TCTGATCCTGTTCCTAAGTTCCAAACTATAGCCAACACTCTGATGCTGCTCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp CTGGTGCACCCGTTCCCTTTTGCATGTCTATTCTTCATGCCTCTTACACTAGCTAAGTCTCAGTGTTTATaGTTCTCATCTTTGTGTCCA +
Preference number: 5 (lower is better)
Translates to: LVHPFPFACLFFMPLTLAKSQCL*FSSLCP
Trigger: TGGACACAAAGATGAGAACAATAAACACTGAGACTT...AGCTAGTGTAAGAGGCATGAAGAATAGACATGCAAAAGGGAACGGGTGCACCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327245.10
CDS-3UTR CAA 90 bp TGTTATAGGGGAATAGTGGTTATAACTTTTCCCTGTAAGATGGCACATTGGATGAGGCTGAGCACCTTTTaGGCTTCTCATAGTTGCTGG +
Preference number: 5 (lower is better)
Translates to: CYRGIVVITFPCKMAHWMRLSTF*ASHSCW
Trigger: CCAGCAACTATGAGAAGCCAAAAAGGTGCTCAGCCT...CATCCAATGTGCCATCTTACAGGGAAAAGTTATAACCACTATTCCCCTATAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp TGTTATAGGGGAATAGTGGTTATAACTTTTCCCTGTAAGATGGCACATTGGATGTCGCTTACAACCTTCTaGGCAATGCATAGTGTGCGC +
Preference number: 5 (lower is better)
Translates to: CYRGIVVITFPCKMAHWMSLTTF*AMHSVR
Trigger: GCGCACACTATGCATTGCCAAGAAGGTTGTAAGCGA...CATCCAATGTGCCATCTTACAGGGAAAAGTTATAACCACTATTCCCCTATAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp TGTTATAGGGGAATAGTGGTTATAACTTTTCCCTGTAAGATGGCACATTGGATGACGAGCAGCAACTTCTaGAGATGCTTAAAGCGGGTG +
Preference number: 5 (lower is better)
Translates to: CYRGIVVITFPCKMAHWMTSSNF*RCLKRV
Trigger: CACCCGCTTTAAGCATCTCAAGAAGTTGCTGCTCGT...CATCCAATGTGCCATCTTACAGGGAAAAGTTATAACCACTATTCCCCTATAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp GACTTAATACCTATGTCAAGCCTGGGAAGAAAGGCAGTTCTAATCAACTTGCAGTCTGCAGAGATGTCTTaGTCAAGGACTCCAAAGACA +
Preference number: 5 (lower is better)
Translates to: DLIPMSSLGRKAVLINLQSAEMS*SRTPKT
Trigger: TGTCTTTGGAGTCCTTGACAAAGACATCTCTGCAGA...CTGCAAGTTGATTAGAACTGCCTTTCTTCCCAGGCTTGACATAGGTATTAAGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp CTTTTTGCCTACTATATAGGTACTAGCTTAAGGTGGCTCAGTAACCCTTTCTGGTATCAGTCTGTCCTCTaGAGTAGGCCATTATCCTGT +
Preference number: 5 (lower is better)
Translates to: LFAYYIGTSLRWLSNPFWYQSVL*SRPLSC
Trigger: ACAGGATAATGGCCTACTCAAGAGGACAGACTGATA...CCAGAAAGGGTTACTGAGCCACCTTAAGCTAGTACCTATATAGTAGGCAAAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp AAAGAGCAGCATCAGAGTGTTGGCTATAGTTTGGAACTTAGGAACAGGATCAGATATCAGTCTGTCCTCTaGAGTAGGCCATTATCCTGT +
Preference number: 5 (lower is better)
Translates to: KEQHQSVGYSLELRNRIRYQSVL*SRPLSC
Trigger: ACAGGATAATGGCCTACTCAAGAGGACAGACTGATA...TCTGATCCTGTTCCTAAGTTCCAAACTATAGCCAACACTCTGATGCTGCTCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp AAAGAGCAGCATCAGAGTGTTGGCTATAGTTTGGAACTTAGGAACAGGATCAGAACTAGGTGGCCTCTGTaGAGTTTGTACAGATTTCTG +
Preference number: 5 (lower is better)
Translates to: KEQHQSVGYSLELRNRIRTRWPL*SLYRFL
Trigger: CAGAAATCTGTACAAACTCAACAGAGGCCACCTAGT...TCTGATCCTGTTCCTAAGTTCCAAACTATAGCCAACACTCTGATGCTGCTCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp TTTTACAAGACTAGGGTTAGGCTATACTTGCCCACAGCAGACCTGGCTTCTTTGGAGATATTGCCTGGGTaGATACACTTCTTGAATCTT +
Preference number: 5 (lower is better)
Translates to: FYKTRVRLYLPTADLASLEILPG*IHFLNL
Trigger: AAGATTCAAGAAGTGTATCAACCCAGGCAATATCTC...CAAAGAAGCCAGGTCTGCTGTGGGCAAGTATAGCCTAACCCTAGTCTTGTAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp TTTCTTTGGCTTACAGGCAAAAAGCAGAACCAACTCGCTGTGCCTGGAAGGGATGACTCACCACACTTATaGCATCTATTTCTGTACTTT +
Preference number: 5 (lower is better)
Translates to: FLWLTGKKQNQLAVPGRDDSPHL*HLFLYF
Trigger: AAAGTACAGAAATAGATGCAATAAGTGTGGTGAGTC...ATCCCTTCCAGGCACAGCGAGTTGGTTCTGCTTTTTGCCTGTAAGCCAAAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS TCA 90 bp ACTCGTCTCATAAAGTGCTTTGTCTGGCACCAGACAAAGATCAGCTaGAGGGGAACCACATATGGGATAACTTCTAACCTTTGTAAACAA +
Preference number: 5 (lower is better)
Translates to: TRLIKCFVWHQTKIS*RGTTYGITSNLCKQ
Trigger: TTGTTTACAAAGGTTAGAAGTTATCCCATATGTGGTTCCCCTTCAGCTGATCTTTGTCTGGTGCCAGACAAAGCACTTTATGAGACGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326831.7
ENST00000517802.5
ENST00000521033.5
CDS-3UTR CAA 90 bp AAGAATGGCTTTGGTCTAAACCGATTTGAGAACTCGATTCAACAAAAACAGCCTTTGTTGAGGTGGTTGTaGGGTTTCTCACACACGATG +
Preference number: 5 (lower is better)
Translates to: KNGFGLNRFENSIQQKQPLLRWL*GFSHTM
Trigger: CATCGTGTGTGAGAAACCCAACAACCACCTCAACAA...AGGCTGTTTTTGTTGAATCGAGTTCTCAAATCGGTTTAGACCAAAGCCATTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp AAAGAGCAGCATCAGAGTGTTGGCTATAGTTTGGAACTTAGGAACAGGATCAGAAGAAGAAAACAGTGCTaGAAAGTGGCGGTATTTCTC +
Preference number: 5 (lower is better)
Translates to: KEQHQSVGYSLELRNRIRRRKQC*KVAVFL
Trigger: GAGAAATACCGCCACTTTCAAGCACTGTTTTCTTCT...TCTGATCCTGTTCCTAAGTTCCAAACTATAGCCAACACTCTGATGCTGCTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327245.10
CDS-3UTR CAA 90 bp GGTGGCATGACTCGTAGGCTCAAAGACTCACCACACTTATTGCATCTATTTCTGTCCAATATCAGCAGCTaGAATCATGCTTACATCATT +
Preference number: 5 (lower is better)
Translates to: GGMTRRLKDSPHLLHLFLSNISS*NHAYII
Trigger: AATGATGTAAGCATGATTCAAGCTGCTGATATTGGA...CAGAAATAGATGCAATAAGTGTGGTGAGTCTTTGAGCCTACGAGTCATGCCACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp GACTTAATACCTATGTCAAGCCTGGGAAGAAAGGCAGTTCTAATCAACTTGCAGATGTCTTCATTTCCATaGCCTGGTGCAAAAGGATTG +
Preference number: 5 (lower is better)
Translates to: DLIPMSSLGRKAVLINLQMSSFP*PGAKGL
Trigger: CAATCCTTTTGCACCAGGCAATGGAAATGAAGACAT...CTGCAAGTTGATTAGAACTGCCTTTCTTCCCAGGCTTGACATAGGTATTAAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp CAATTCACATCATCATCACTTTGCCAGGTATGTGTACCTGCCCCTTATTGGGCACCATGGAAGTCAAGGTaGTTGAAGAAAAGAATAAGA +
Preference number: 5 (lower is better)
Translates to: QFTSSSLCQVCVPAPYWAPWKSR*LKKRIR
Trigger: TCTTATTCTTTTCTTCAACAACCTTGACTTCCATGG...TGCCCAATAAGGGGCAGGTACACATACCTGGCAAAGTGATGATGATGTGAATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp AAGAATGGCTTTGGTCTAAACCGATTTGAGAACTCGATTCAACAAAAACAGCCTCACATCATCATCACTTaGCCAGGTATGTGTACCTGC +
Preference number: 5 (lower is better)
Translates to: KNGFGLNRFENSIQQKQPHIIIT*PGMCTC
Trigger: GCAGGTACACATACCTGGCAAAGTGATGATGATGTG...AGGCTGTTTTTGTTGAATCGAGTTCTCAAATCGGTTTAGACCAAAGCCATTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS-3UTR CAA 90 bp TGTTATAGGGGAATAGTGGTTATAACTTTTCCCTGTAAGATGGCACATTGGATGATGGTCACAGTTGGCTaGATTTACAGAGGGGCAAGA +
Preference number: 5 (lower is better)
Translates to: CYRGIVVITFPCKMAHWMMVTVG*IYRGAR
Trigger: TCTTGCCCCTCTGTAAATCAAGCCAACTGTGACCAT...CATCCAATGTGCCATCTTACAGGGAAAAGTTATAACCACTATTCCCCTATAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS CCA 90 bp TTGGATGTGGGTGGAAGTTCTCAGGGAGAAGTTTCTCCAACACTCTaGATATTTCCTTGTATCTCAACTAAGGACCAAAGAAAGAAGAAT +
Preference number: 5 (lower is better)
Translates to: LDVGGSSQGEVSPTL*IFPCISTKDQRKKN
Trigger: ATTCTTCTTTCTTTGGTCCTTAGTTGAGATACAAGGAAATATCCAGAGTGTTGGAGAAACTTCTCCCTGAGAACTTCCACCCACATCCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517815.1
CDS-3UTR CAA 90 bp TGTTATAGGGGAATAGTGGTTATAACTTTTCCCTGTAAGATGGCACATTGGATGCTTGCTGGTCTTGATTaGATTCCCACGATGATGTCT +
Preference number: 5 (lower is better)
Translates to: CYRGIVVITFPCKMAHWMLAGLD*IPTMMS
Trigger: AGACATCATCGTGGGAATCAAATCAAGACCAGCAAG...CATCCAATGTGCCATCTTACAGGGAAAAGTTATAACCACTATTCCCCTATAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642502.1
CDS-3UTR CAA 90 bp GACTTAATACCTATGTCAAGCCTGGGAAGAAAGGCAGTTCTAATCAACTTGCAGTTTCTCTCGCACACCTaGGCTAAAATAGTTCTCTTT +
Preference number: 5 (lower is better)
Translates to: DLIPMSSLGRKAVLINLQFLSHT*AKIVLF
Trigger: AAAGAGAACTATTTTAGCCAAGGTGTGCGAGAGAAA...CTGCAAGTTGATTAGAACTGCCTTTCTTCCCAGGCTTGACATAGGTATTAAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327245.10
CDS-3UTR CAA 90 bp AAGAATGGCTTTGGTCTAAACCGATTTGAGAACTCGATTCAACAAAAACAGCCTTTTTCTCCACTCCATTaGGTGGTTTCTGTTAGCGGA +
Preference number: 5 (lower is better)
Translates to: KNGFGLNRFENSIQQKQPFSPLH*VVSVSG
Trigger: TCCGCTAACAGAAACCACCAAATGGAGTGGAGAAAA...AGGCTGTTTTTGTTGAATCGAGTTCTCAAATCGGTTTAGACCAAAGCCATTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000327245.10
CDS-3UTR CAA 90 bp AAGAATGGCTTTGGTCTAAACCGATTTGAGAACTCGATTCAACAAAAACAGCCTTCTTCCAATGCACAATaGAGGATGGATTCACAGGTC +
Preference number: 5 (lower is better)
Translates to: KNGFGLNRFENSIQQKQPSSNAQ*RMDSQV
Trigger: GACCTGTGAATCCATCCTCAATTGTGCATTGGAAGA...AGGCTGTTTTTGTTGAATCGAGTTCTCAAATCGGTTTAGACCAAAGCCATTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS TCA 90 bp CCAGTGAGAATAGTGATCATTAAAATGTCAGGACACAACAGATGCTaGAGAGGATGTAGAGAAACAGGAATACTTTTACACTGTTGGTGG +
Preference number: 5 (lower is better)
Translates to: PVRIVIIKMSGHNRC*RGCRETGILLHCWW
Trigger: CCACCAACAGTGTAAAAGTATTCCTGTTTCTCTACATCCTCTTCAGCATCTGTTGTGTCCTGACATTTTAATGATCACTATTCTCACTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326831.7
CDS-3UTR CAA 90 bp AAGAATGGCTTTGGTCTAAACCGATTTGAGAACTCGATTCAACAAAAACAGCCTAAATTGGGGGAAAAATaGAGGTACCTGAGATCCAAG +
Preference number: 5 (lower is better)
Translates to: KNGFGLNRFENSIQQKQPKLGEK*RYLRSK
Trigger: CTTGGATCTCAGGTACCTCAATTTTTCCCCCAATTT...AGGCTGTTTTTGTTGAATCGAGTTCTCAAATCGGTTTAGACCAAAGCCATTCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS TCA 90 bp TGGAAGACAAAGATTCCTCAAGGATCTAGAACCAGAAATACCATTTaGCCAGCAATCCCATTACTGGGTATATACCCAAAGGATTATAAA +
Preference number: 5 (lower is better)
Translates to: WKTKIPQGSRTRNTI*PAIPLLGIYPKDYK
Trigger: TTTATAATCCTTTGGGTATATACCCAGTAATGGGATTGCTGGTCAAATGGTATTTCTGGTTCTAGATCCTTGAGGAATCTTTGTCTTCCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326831.7
CDS GCA 90 bp ATATTTCCTTGTATCTCAACTAAGGACCAAAGAAAGAAGAATAGTTaGAGAGAACAATACCTGCATGCCTTCCTGTCCAGATATTCCAAT +
Preference number: 5 (lower is better)
Translates to: IFPCISTKDQRKKNS*REQYLHAFLSRYSN
Trigger: ATTGGAATATCTGGACAGGAAGGCATGCAGGTATTGTTCTCTGCAACTATTCTTCTTTCTTTGGTCCTTAGTTGAGATACAAGGAAATAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517815.1
CDS TCA 72 bp GGCTGGGGCCTCCAATGCCTCCTCCAAGGAAGTGCCTaGCCCAGACTCCAGGATGTCGCCCTGGTCCCACAT +
Preference number: 6 (lower is better)
Translates to: GWGLQCLLQGSA*PRLQDVALVPH
Trigger: ATGTGGGACCAGGGCGACATCCTGGAGTCTGGGTCAGGCACTTCCTTGGAGGAGGCATTGGAGGCCCCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327245.10
ENST00000520108.1
ENST00000642502.1
CDS GCA 72 bp CTGACCCAGACTCCAGGATGTCGCCCTGGTCCCACATaGTGCTCCTGTAGCCACCGTCATCAGTGGAGTCAC +
Preference number: 6 (lower is better)
Translates to: LTQTPGCRPGPT*CSCSHRHQWSH
Trigger: GTGACTCCACTGATGACGGTGGCTACAGGAGCAGCATGTGGGACCAGGGCGACATCCTGGAGTCTGGGTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327245.10
ENST00000520108.1
ENST00000642502.1
CDS CCA 72 bp TCAGGACCCAGAGCTGGATCCCAGCCTCCCGCAGAGTaGCAATCGTATCTGGAACTCCTTCCTGCAGCCGGT +
Preference number: 6 (lower is better)
Translates to: SGPRAGSQPPAE*QSYLELLPAAG
Trigger: ACCGGCTGCAGGAAGGAGTTCCAGATACGATTGCCACTCTGCGGGAGGCTGGGATCCAGCTCTGGGTCCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327245.10
ENST00000520108.1
ENST00000642502.1
CDS CAA 90 bp GGGCACCCGGGCACTCTGGCTCCTCCTCAGAGGCTGAGCACCTTTTaGGCTTCTCATAGTTGCTGGATCCTGGGCCCATCTAGCCGAGAA +
Preference number: 6 (lower is better)
Translates to: GHPGTLAPPQRLSTF*ASHSCWILGPSSRE
Trigger: TTCTCGGCTAGATGGGCCCAGGATCCAGCAACTATGAGAAGCCAAAAAGGTGCTCAGCCTCTGAGGAGGAGCCAGAGTGCCCGGGTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327245.10
ENST00000520108.1
ENST00000642502.1
CDS TCA 72 bp CTGAAGTCCTGTCCTGTGATAGATGACACTGGGTGGTaGGTTGGTCGAGCCACTTCGGGGACAGGGGCAGGC +
Preference number: 6 (lower is better)
Translates to: LKSCPVIDDTGW*VGRATSGTGAG
Trigger: GCCTGCCCCTGTCCCCGAAGTGGCTCGACCAACTCACCACCCAGTGTCATCTATCACAGGACAGGACTTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS GCA 72 bp TGGGGGAAGCCATCTCTGACTCTCCACTGCCACCGATaGCACGATGAGTCCACTGAGAGGGCCATTTCCAGC +
Preference number: 6 (lower is better)
Translates to: WGKPSLTLHCHR*HDESTERAISS
Trigger: GCTGGAAATGGCCCTCTCAGTGGACTCATCGTGGCATCGGTGGCAGTGGAGAGTCAGAGATGGCTTCCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000327245.10
ENST00000517802.5
ENST00000518411.5
ENST00000520098.5
ENST00000521033.5
CDS GCA 72 bp GATGGACAATGGGGGAAGCCATCTCTGACTCTCCACTaGCACCGATGCCACGATGAGTCCACTGAGAGGGCC +
Preference number: 6 (lower is better)
Translates to: DGQWGKPSLTLH*HRCHDESTERA
Trigger: GGCCCTCTCAGTGGACTCATCGTGGCATCGGTGGCAGTGGAGAGTCAGAGATGGCTTCCCCCATTGTCCATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000327245.10
ENST00000517802.5
ENST00000518411.5
ENST00000520098.5
ENST00000521033.5
CDS CCA 72 bp CATCATCTCTCTCATCCGAGTCTGTGGTGGCCACGTTaGCCCCTAAGCTCTCCCCGAGGTCTGTGTCAGAGG +
Preference number: 6 (lower is better)
Translates to: HHLSHPSLWWPR*PLSSPRGLCQR
Trigger: CCTCTGACACAGACCTCGGGGAGAGCTTAGGGGCCAACGTGGCCACCACAGACTCGGATGAGAGAGATGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327245.10
ENST00000520108.1
ENST00000642502.1
CDS CCA 72 bp GGTTGTCGAGGGATGCCTCAGCCTCACGCCGGAAACTaGCCCATCTCCGGAAGTCCTCTTCGCTTACAACCT +
Preference number: 6 (lower is better)
Translates to: GCRGMPQPHAGN*PISGSPLRLQP
Trigger: AGGTTGTAAGCGAAGAGGACTTCCGGAGATGGGCCAGTTTCCGGCGTGAGGCTGAGGCATCCCTCGACAACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327245.10
ENST00000520108.1
ENST00000642502.1
CDS CAA 72 bp GCATCATCTCTCTCATCCGAGTCTGTGGTGGCCACGTaGGCCCCTAAGCTCTCCCCGAGGTCTGTGTCAGAG +
Preference number: 6 (lower is better)
Translates to: ASSLSSESVVAT*APKLSPRSVSE
Trigger: CTCTGACACAGACCTCGGGGAGAGCTTAGGGGCCAACGTGGCCACCACAGACTCGGATGAGAGAGATGATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327245.10
ENST00000520108.1
ENST00000642502.1
CDS CCA 72 bp TCTGGAGAGAGCAGCGGTGTGGTTTCCGATGGACAATaGGGGAAGCCATCTCTGACTCTCCACTGCCACCGA +
Preference number: 6 (lower is better)
Translates to: SGESSGVVSDGQ*GKPSLTLHCHR
Trigger: TCGGTGGCAGTGGAGAGTCAGAGATGGCTTCCCCCATTGTCCATCGGAAACCACACCGCTGCTCTCTCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327245.10
ENST00000517802.5
ENST00000518411.5
ENST00000520098.5
ENST00000521033.5
CDS CCA 72 bp TGCACACAGATGCATCATCTCTCTCATCCGAGTCTGTaGTGGCCACGTTGGCCCCTAAGCTCTCCCCGAGGT +
Preference number: 6 (lower is better)
Translates to: CTQMHHLSHPSL*WPRWPLSSPRG
Trigger: ACCTCGGGGAGAGCTTAGGGGCCAACGTGGCCACCACAGACTCGGATGAGAGAGATGATGCATCTGTGTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327245.10
ENST00000520108.1
ENST00000642502.1
CDS CCA 72 bp CCCTTTCTCTGGAGAGAGCAGCGGTGTGGTTTCCGATaGACAATGGGGGAAGCCATCTCTGACTCTCCACTG +
Preference number: 6 (lower is better)
Translates to: PFLWREQRCGFR*TMGEAISDSPL
Trigger: CAGTGGAGAGTCAGAGATGGCTTCCCCCATTGTCCATCGGAAACCACACCGCTGCTCTCTCCAGAGAAAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000327245.10
ENST00000517802.5
ENST00000518411.5
ENST00000520098.5
ENST00000521033.5
CDS CCA 72 bp GGATCCTGGGCCCATCTAGCCGAGAAGGACAGGCATTaGTATTGGGTCCACTCTTCACCATCTGAGTCCAGC +
Preference number: 6 (lower is better)
Translates to: GSWAHLAEKDRH*YWVHSSPSESS
Trigger: GCTGGACTCAGATGGTGAAGAGTGGACCCAATACCAATGCCTGTCCTTCTCGGCTAGATGGGCCCAGGATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327245.10
ENST00000520108.1
ENST00000642502.1
CDS CCA 72 bp GGTCCCACATGCTGCTCCTGTAGCCACCGTCATCAGTaGAGTCACCTCCACTGCACACAGATGCATCATCTC +
Preference number: 6 (lower is better)
Translates to: GPTCCSCSHRHQ*SHLHCTQMHHL
Trigger: GAGATGATGCATCTGTGTGCAGTGGAGGTGACTCCACTGATGACGGTGGCTACAGGAGCAGCATGTGGGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327245.10
ENST00000520108.1
ENST00000642502.1
CDS CCA 72 bp AGCACACGTTCTTGTAGAGGTAGTACACCACCATCCTaGCCAGGCGCGAGTAACACCAGTGGCCATGCACGA +
Preference number: 6 (lower is better)
Translates to: STRSCRGSTPPS*PGASNTSGHAR
Trigger: TCGTGCATGGCCACTGGTGTTACTCGCGCCTGGCCAGGATGGTGGTGTACTACCTCTACAAGAACGTGTGCT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS CAA 90 bp TCACCTATGGAAAGGGTCATGACGCGCAACTTGTCTCGCACCAGCTaGACTATCATACTCTTCTGGAGTGGCGTGGAGCGGCAGCACAGG +
Preference number: 6 (lower is better)
Translates to: SPMERVMTRNLSRTS*TIILFWSGVERQHR
Trigger: CCTGTGCTGCCGCTCCACGCCACTCCAGAAGAGTATGATAGTCAAGCTGGTGCGAGACAAGTTGCGCGTCATGACCCTTTCCATAGGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327245.10
ENST00000517815.1
ENST00000642502.1
CDS TCA 72 bp GGACAGGCATTGGTATTGGGTCCACTCTTCACCATCTaGGTCCAGCTCCTTTGGGGTCTCCAGTCGCTTAGC +
Preference number: 6 (lower is better)
Translates to: GQALVLGPLFTI*VQLLWGLQSLS
Trigger: GCTAAGCGACTGGAGACCCCAAAGGAGCTGGACTCAGATGGTGAAGAGTGGACCCAATACCAATGCCTGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327245.10
ENST00000520108.1
ENST00000642502.1
CDS GCA 72 bp ACCGTCATCAGTGGAGTCACCTCCACTGCACACAGATaGATCATCTCTCTCATCCGAGTCTGTGGTGGCCAC +
Preference number: 6 (lower is better)
Translates to: TVISGVTSTAHR*IISLIRVCGGH
Trigger: GTGGCCACCACAGACTCGGATGAGAGAGATGATGCATCTGTGTGCAGTGGAGGTGACTCCACTGATGACGGT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327245.10
ENST00000520108.1
ENST00000642502.1
CDS CCA 72 bp CAGAGGCTGAGCACCTTTTTGGCTTCTCATAGTTGCTaGATCCTGGGCCCATCTAGCCGAGAAGGACAGGCA +
Preference number: 6 (lower is better)
Translates to: QRLSTFLASHSC*ILGPSSREGQA
Trigger: TGCCTGTCCTTCTCGGCTAGATGGGCCCAGGATCCAGCAACTATGAGAAGCCAAAAAGGTGCTCAGCCTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327245.10
ENST00000520108.1
ENST00000642502.1
CDS CCA 72 bp TTACCACGTTCTTGTAGAGGTAGTACACCACCATCCTaGCCAGGCGCGAGTAACACCAGTGGCCATGCACGA +
Preference number: 6 (lower is better)
Translates to: LPRSCRGSTPPS*PGASNTSGHAR
Trigger: TCGTGCATGGCCACTGGTGTTACTCGCGCCTGGCCAGGATGGTGGTGTACTACCTCTACAAGAACGTGGTAA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523758.1
CDS CCA 72 bp GCCCTACGCCCACACCCCTGCAGTAGAGTGCTCTTCTaGTTAATATCCTCCATGGAATCCAACCCCTGCTTC +
Preference number: 6 (lower is better)
Translates to: ALRPHPCSRVLF*LISSMESNPCF
Trigger: GAAGCAGGGGTTGGATTCCATGGAGGATATTAACCAGAAGAGCACTCTACTGCAGGGGTGTGGGCGTAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522169.1
CDS CAA 72 bp GAAAGGGTCATGACGCGCAACTTGTCTCGCACCAGCTaGACTATCATACTCTTCTGGAGTGGCGTGGAGCGG +
Preference number: 6 (lower is better)
Translates to: ERVMTRNLSRTS*TIILFWSGVER
Trigger: CCGCTCCACGCCACTCCAGAAGAGTATGATAGTCAAGCTGGTGCGAGACAAGTTGCGCGTCATGACCCTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327245.10
ENST00000517815.1
ENST00000642502.1
CDS CAA 90 bp GTGACCCTCTGCCTGGGCTCGGTGGTTGTGGACACCATGACAGAGTaGCAGATGGTTAAGGCAAGGAAGAAATCAGCAATGGAGGAGGTG +
Preference number: 6 (lower is better)
Translates to: VTLCLGSVVVDTMTE*QMVKARKKSAMEEV
Trigger: CACCTCCTCCATTGCTGATTTCTTCCTTGCCTTAACCATCTGCAACTCTGTCATGGTGTCCACAACCACCGAGCCCAGGCAGAGGGTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327245.10
ENST00000520108.1
ENST00000642502.1
CDS TCA 72 bp TCTGTTAGCGGAGTCCCTTTAAGGAGGTTAGACCAGTaGCCTTTGCTGTGCCCCTACAGCCACAGGAAGAGG +
Preference number: 6 (lower is better)
Translates to: SVSGVPLRRLDQ*PLLCPYSHRKR
Trigger: CCTCTTCCTGTGGCTGTAGGGGCACAGCAAAGGTCACTGGTCTAACCTCCTTAAAGGGACTCCGCTAACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327245.10
ENST00000517802.5
ENST00000520098.5
ENST00000520975.1
CDS TCA 72 bp CCATCACCCAATAGGGATTGGTGGGGCTGTTGCAGATaGCGCAGGTGGCATTGTACAGGAGGGATACCAGAA +
Preference number: 6 (lower is better)
Translates to: PSPNRDWWGCCR*RRWHCTGGIPE
Trigger: TTCTGGTATCCCTCCTGTACAATGCCACCTGCGTCATCTGCAACAGCCCCACCAATCCCTATTGGGTGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS GCA 72 bp CCGGAGGTCTTCCCAAGCGTCCTTGATGGCAGTGACTaGCAGGATAACACAGATTGGTATCATGCTCACCTC +
Preference number: 6 (lower is better)
Translates to: PEVFPSVLDGSD*QDNTDWYHAHL
Trigger: GAGGTGAGCATGATACCAATCTGTGTTATCCTGGCAGTCACTGCCATCAAGGACGCTTGGGAAGACCTCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326831.7
ENST00000642502.1
CDS GCA 72 bp TCCTGTAGCCACCGTCATCAGTGGAGTCACCTCCACTaGACACAGATGCATCATCTCTCTCATCCGAGTCTG +
Preference number: 6 (lower is better)
Translates to: SCSHRHQWSHLH*TQMHHLSHPSL
Trigger: CAGACTCGGATGAGAGAGATGATGCATCTGTGTGCAGTGGAGGTGACTCCACTGATGACGGTGGCTACAGGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327245.10
ENST00000520108.1
ENST00000642502.1
CDS GCA 72 bp AGTCCCCTGAGCATGAGTCATCCCTCATGCACTCCGTaGCACATCTCTGTTCGTGGAGTACTGACTCTTCCA +
Preference number: 6 (lower is better)
Translates to: SPLSMSHPSCTP*HISVRGVLTLP
Trigger: TGGAAGAGTCAGTACTCCACGAACAGAGATGTGGCACGGAGTGCATGAGGGATGACTCATGCTCAGGGGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS GCA 72 bp CTCATATGGTCAGTGAACTCTGGGATCGGCGATGGCTaGTCCTCTTTGAGCACCGGCACATATCAGTCTGTC +
Preference number: 6 (lower is better)
Translates to: LIWSVNSGIGDG*SSLSTGTYQSV
Trigger: GACAGACTGATATGTGCCGGTGCTCAAAGAGGAGCAGCCATCGCCGATCCCAGAGTTCACTGACCATATGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS CCA 72 bp TGGGCCCATCTAGCCGAGAAGGACAGGCATTGGTATTaGGTCCACTCTTCACCATCTGAGTCCAGCTCCTTT +
Preference number: 6 (lower is better)
Translates to: WAHLAEKDRHWY*VHSSPSESSSF
Trigger: AAAGGAGCTGGACTCAGATGGTGAAGAGTGGACCCAATACCAATGCCTGTCCTTCTCGGCTAGATGGGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327245.10
ENST00000520108.1
ENST00000642502.1
CDS CAA 72 bp TGTTCGTGGAGTACTGACTCTTCCACATGCTTCCTCTaGGGAGGGTTAGAGCTCTTTGGGGTGCTGGCACTG +
Preference number: 6 (lower is better)
Translates to: CSWSTDSSTCFL*GGLELFGVLAL
Trigger: CAGTGCCAGCACCCCAAAGAGCTCTAACCCTCCCAAGAGGAAGCATGTGGAAGAGTCAGTACTCCACGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS CAA 72 bp TCAGTGAACTCTGGGATCGGCGATGGCTGCTCCTCTTaGAGCACCGGCACATATCAGTCTGTCCTCTTGAGT +
Preference number: 6 (lower is better)
Translates to: SVNSGIGDGCSS*STGTYQSVLLS
Trigger: ACTCAAGAGGACAGACTGATATGTGCCGGTGCTCAAAGAGGAGCAGCCATCGCCGATCCCAGAGTTCACTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS CAA 90 bp GCAGGTTCTGTTGCCAGGGTATCTCCTGGAGACCTCTTCCCAATCTaGATGGAATATGCTGTTGTTGGGGAACACGACCCGCTGCTGTGT +
Preference number: 6 (lower is better)
Translates to: AGSVARVSPGDLFPI*MEYAVVGEHDPLLC
Trigger: ACACAGCAGCGGGTCGTGTTCCCCAACAACAGCATATTCCATCAAGATTGGGAAGAGGTCTCCAGGAGATACCCTGGCAACAGAACCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327245.10
ENST00000517802.5
ENST00000518411.5
ENST00000521033.5
CDS CAA 90 bp CCACATCTCTGTTCGTGGAGTACTGACTCTTCCACATGCTTCCTCTaGGGAGGGTTAGAGCTCTTTGGGGTGCTGGCACTGAAGTCCTGT +
Preference number: 6 (lower is better)
Translates to: PHLCSWSTDSSTCFL*GGLELFGVLALKSC
Trigger: ACAGGACTTCAGTGCCAGCACCCCAAAGAGCTCTAACCCTCCCAAGAGGAAGCATGTGGAAGAGTCAGTACTCCACGAACAGAGATGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS TCA 72 bp TTGCCAGGGTATCTCCTGGAGACCTCTTCCCAATCTTaGTGGAATATGCTGTTGTTGGGGAACACGACCCGC +
Preference number: 6 (lower is better)
Translates to: LPGYLLETSSQS*WNMLLLGNTTR
Trigger: GCGGGTCGTGTTCCCCAACAACAGCATATTCCATCAAGATTGGGAAGAGGTCTCCAGGAGATACCCTGGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327245.10
ENST00000517802.5
ENST00000518411.5
ENST00000521033.5
CDS GCA 72 bp TGTACAGGAGGGATACCAGAAAGTACATCAGGAAGCTaGCGAGGAGCACGACTCCGTGGAAAATGGTCCATG +
Preference number: 6 (lower is better)
Translates to: CTGGIPESTSGS*RGARLRGKWSM
Trigger: CATGGACCATTTTCCACGGAGTCGTGCTCCTCGGCAGCTTCCTGATGTACTTTCTGGTATCCCTCCTGTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS GCA 72 bp CCACATCTCTGTTCGTGGAGTACTGACTCTTCCACATaGTTCCTCTTGGGAGGGTTAGAGCTCTTTGGGGTG +
Preference number: 6 (lower is better)
Translates to: PHLCSWSTDSST*FLLGGLELFGV
Trigger: CACCCCAAAGAGCTCTAACCCTCCCAAGAGGAAGCATGTGGAAGAGTCAGTACTCCACGAACAGAGATGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS CCA 72 bp CTGCTGTGTCAAGTTGTAGCTCTGTCTCCCTTTCTCTaGAGAGAGCAGCGGTGTGGTTTCCGATGGACAATG +
Preference number: 6 (lower is better)
Translates to: LLCQVVALSPFL*REQRCGFRWTM
Trigger: CATTGTCCATCGGAAACCACACCGCTGCTCTCTCCAGAGAAAGGGAGACAGAGCTACAACTTGACACAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327245.10
ENST00000517802.5
ENST00000518411.5
ENST00000520098.5
ENST00000521033.5
CDS CCA 72 bp TTCCACATGCTTCCTCTTGGGAGGGTTAGAGCTCTTTaGGGTGCTGGCACTGAAGTCCTGTCCTGTGATAGA +
Preference number: 6 (lower is better)
Translates to: FHMLPLGRVRAL*GAGTEVLSCDR
Trigger: TCTATCACAGGACAGGACTTCAGTGCCAGCACCCCAAAGAGCTCTAACCCTCCCAAGAGGAAGCATGTGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS CCA 72 bp TCTGAACACCTTTCACCACCCCCTGAGTCAGGCCATTaGCTCCATTCACAGATGGAGCTAAGTGACAGCTCT +
Preference number: 6 (lower is better)
Translates to: SEHLSPPPESGH*LHSQMELSDSS
Trigger: AGAGCTGTCACTTAGCTCCATCTGTGAATGGAGCCAATGGCCTGACTCAGGGGGTGGTGAAAGGTGTTCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523758.1
CDS CAA 72 bp TCCGATTTGTACCTCCGGAGGTCTTCCCAAGCGTCCTaGATGGCAGTGACTGCCAGGATAACACAGATTGGT +
Preference number: 6 (lower is better)
Translates to: SDLYLRRSSQAS*MAVTARITQIG
Trigger: ACCAATCTGTGTTATCCTGGCAGTCACTGCCATCAAGGACGCTTGGGAAGACCTCCGGAGGTACAAATCGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326831.7
ENST00000642502.1
CDS CAA 72 bp GTTGCCAGGGTATCTCCTGGAGACCTCTTCCCAATCTaGATGGAATATGCTGTTGTTGGGGAACACGACCCG +
Preference number: 6 (lower is better)
Translates to: VARVSPGDLFPI*MEYAVVGEHDP
Trigger: CGGGTCGTGTTCCCCAACAACAGCATATTCCATCAAGATTGGGAAGAGGTCTCCAGGAGATACCCTGGCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327245.10
ENST00000517802.5
ENST00000518411.5
ENST00000521033.5
CDS CAA 72 bp GGATTGGTGGGGCTGTTGCAGATGACGCAGGTGGCATaGTACAGGAGGGATACCAGAAAGTACATCAGGAAG +
Preference number: 6 (lower is better)
Translates to: GLVGLLQMTQVA*YRRDTRKYIRK
Trigger: CTTCCTGATGTACTTTCTGGTATCCCTCCTGTACAATGCCACCTGCGTCATCTGCAACAGCCCCACCAATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS CAA 90 bp CTCATATGGTCAGTGAACTCTGGGATCGGCGATGGCTGCTCCTCTTaGAGCACCGGCACATATCAGTCTGTCCTCTTGAGTAGGCCATTA +
Preference number: 6 (lower is better)
Translates to: LIWSVNSGIGDGCSS*STGTYQSVLLSRPL
Trigger: TAATGGCCTACTCAAGAGGACAGACTGATATGTGCCGGTGCTCAAAGAGGAGCAGCCATCGCCGATCCCAGAGTTCACTGACCATATGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS CAA 90 bp GCCCTGATCTGTGACAAGGAAGACCACAGGGATACAGGAAGCAACTaGTGGAAATGCCACACAGCCTCTAAGAGAGCCAGGAGAATGTCT +
Preference number: 6 (lower is better)
Translates to: ALICDKEDHRDTGSN*WKCHTASKRARRMS
Trigger: AGACATTCTCCTGGCTCTCTTAGAGGCTGTGTGGCATTTCCACAAGTTGCTTCCTGTATCCCTGTGGTCTTCCTTGTCACAGATCAGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326831.7
ENST00000517802.5
ENST00000521033.5
CDS CAA 90 bp AATTGCTCAAAGAGATTCCGGGGCAGGAAGGTGAAGAGGGTGTATTaGGTTGTGCAGGTTCTGTTGCCAGGGTATCTCCTGGAGACCTCT +
Preference number: 6 (lower is better)
Translates to: NCSKRFRGRKVKRVY*VVQVLLPGYLLETS
Trigger: AGAGGTCTCCAGGAGATACCCTGGCAACAGAACCTGCACAACCAAATACACCCTCTTCACCTTCCTGCCCCGGAATCTCTTTGAGCAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327245.10
ENST00000517802.5
ENST00000518411.5
ENST00000521033.5
CDS TCA 72 bp CCTGCTGTGAGAAGCCCTTCACGACACATCTTTGCTTaGGGTTTGTCTCTCCATCCAAGCTGGCAGTTTCCA +
Preference number: 6 (lower is better)
Translates to: PAVRSPSRHIFA*GLSLHPSWQFP
Trigger: TGGAAACTGCCAGCTTGGATGGAGAGACAAACCTCAAGCAAAGATGTGTCGTGAAGGGCTTCTCACAGCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326831.7
ENST00000327245.10
ENST00000517802.5
ENST00000521033.5
ENST00000642502.1
CDS TCA 72 bp ATGGAGCCCTTGGGAGCTTCTATACCATTTTCTTGGTaGGAATACTCGCTGCCCATGATGGTGCAACGTCGG +
Preference number: 6 (lower is better)
Translates to: MEPLGASIPFSW*EYSLPMMVQRR
Trigger: CCGACGTTGCACCATCATGGGCAGCGAGTATTCTCACCAAGAAAATGGTATAGAAGCTCCCAAGGGCTCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326831.7
ENST00000517802.5
ENST00000521033.5
CDS TCA 72 bp GGGAGAGGTTCTTTCCTAGGAAATTTGTCCATGAGGTaGCTGGGCTGTGCTACTGTCCAGTCAGCTGGCTTT +
Preference number: 6 (lower is better)
Translates to: GRGSFLGNLSMR*LGCATVQSAGF
Trigger: AAAGCCAGCTGACTGGACAGTAGCACAGCCCAGTCACCTCATGGACAAATTTCCTAGGAAAGAACCTCTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327245.10
CDS TCA 72 bp CGGTCTTCGATCCCAGTGGCTCCAAGTAAGGTGAGTTaGTTCTCCAGATGCTGTGCAGTTTCCATGAGAAGC +
Preference number: 6 (lower is better)
Translates to: RSSIPVAPSKVS*FSRCCAVSMRS
Trigger: GCTTCTCATGGAAACTGCACAGCATCTGGAGAATCAACTCACCTTACTTGGAGCCACTGGGATCGAAGACCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327245.10
ENST00000520108.1
ENST00000642502.1
CDS GCA 72 bp ATCTCCTGGAGACCTCTTCCCAATCTTGATGGAATATaGTGTTGTTGGGGAACACGACCCGCTGCTGTGTCA +
Preference number: 6 (lower is better)
Translates to: ISWRPLPNLDGI*CCWGTRPAAVS
Trigger: TGACACAGCAGCGGGTCGTGTTCCCCAACAACAGCATATTCCATCAAGATTGGGAAGAGGTCTCCAGGAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327245.10
ENST00000517802.5
ENST00000518411.5
ENST00000521033.5
CDS GCA 72 bp AGTGTGCGCAGGCCATCTCTTGCATACAAGTCTAGATaGTTTTGGGTCCGGGCTCGGATTTTTCTCAGCTTC +
Preference number: 6 (lower is better)
Translates to: SVRRPSLAYKSR*FWVRARIFLSF
Trigger: GAAGCTGAGAAAAATCCGAGCCCGGACCCAAAAGCATCTAGACTTGTATGCAAGAGATGGCCTGCGCACACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327245.10
ENST00000520108.1
ENST00000642502.1
CDS CCA 72 bp CTGTTGAGTTTGTACAGATTTCTGCAGCTCCTCATATaGTCAGTGAACTCTGGGATCGGCGATGGCTGCTCC +
Preference number: 6 (lower is better)
Translates to: LLSLYRFLQLLI*SVNSGIGDGCS
Trigger: GGAGCAGCCATCGCCGATCCCAGAGTTCACTGACCATATGAGGAGCTGCAGAAATCTGTACAAACTCAACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS CAA 72 bp TCCTGCTGTGAGAAGCCCTTCACGACACATCTTTGCTaGAGGTTTGTCTCTCCATCCAAGCTGGCAGTTTCC +
Preference number: 6 (lower is better)
Translates to: SCCEKPFTTHLC*RFVSPSKLAVS
Trigger: GGAAACTGCCAGCTTGGATGGAGAGACAAACCTCAAGCAAAGATGTGTCGTGAAGGGCTTCTCACAGCAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326831.7
ENST00000327245.10
ENST00000517802.5
ENST00000521033.5
ENST00000642502.1
CDS CAA 72 bp AGGGATGGAGCCCTTGGGAGCTTCTATACCATTTTCTaGGTGAGAATACTCGCTGCCCATGATGGTGCAACG +
Preference number: 6 (lower is better)
Translates to: RDGALGSFYTIF*VRILAAHDGAT
Trigger: CGTTGCACCATCATGGGCAGCGAGTATTCTCACCAAGAAAATGGTATAGAAGCTCCCAAGGGCTCCATCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326831.7
ENST00000517802.5
ENST00000521033.5
CDS CAA 72 bp TGTGACAAGGAAGACCACAGGGATACAGGAAGCAACTaGTGGAAATGCCACACAGCCTCTAAGAGAGCCAGG +
Preference number: 6 (lower is better)
Translates to: CDKEDHRDTGSN*WKCHTASKRAR
Trigger: CCTGGCTCTCTTAGAGGCTGTGTGGCATTTCCACAAGTTGCTTCCTGTATCCCTGTGGTCTTCCTTGTCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326831.7
ENST00000517802.5
ENST00000521033.5
CDS CAA 90 bp GGTCAAGGGTTATGTGGACCAGTGACTAGGTGGCCTCTGTTGAGTTaGTACAGATTTCTGCAGCTCCTCATATGGTCAGTGAACTCTGGG +
Preference number: 6 (lower is better)
Translates to: GQGLCGPVTRWPLLS*YRFLQLLIWSVNSG
Trigger: CCCAGAGTTCACTGACCATATGAGGAGCTGCAGAAATCTGTACAAACTCAACAGAGGCCACCTAGTCACTGGTCCACATAACCCTTGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS TCA 72 bp TGGGGACGAAGGACAACACGGTGTACTTGCTGGTCTTaGTTTGATTCCCACGATGATGTCTGTTGGGGTTCT +
Preference number: 6 (lower is better)
Translates to: WGRRTTRCTCWS*FDSHDDVCWGS
Trigger: AGAACCCCAACAGACATCATCGTGGGAATCAAATCAAGACCAGCAAGTACACCGTGTTGTCCTTCGTCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326831.7
ENST00000642502.1
CDS CCA 72 bp AGACCTCTTCCCAATCTTGATGGAATATGCTGTTGTTaGGGAACACGACCCGCTGCTGTGTCAAGTTGTAGC +
Preference number: 6 (lower is better)
Translates to: RPLPNLDGICCC*GTRPAAVSSCS
Trigger: GCTACAACTTGACACAGCAGCGGGTCGTGTTCCCCAACAACAGCATATTCCATCAAGATTGGGAAGAGGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327245.10
ENST00000517802.5
ENST00000518411.5
ENST00000521033.5
CDS CCA 72 bp TCTAGAATCCAAGGAGGGCAGATCAGAAGGGATCAGTaGTCTAGGCTGGCTCTTCATCCGTTTATCCAGCAA +
Preference number: 6 (lower is better)
Translates to: SRIQGGQIRRDQ*SRLALHPFIQQ
Trigger: TTGCTGGATAAACGGATGAAGAGCCAGCCTAGACCACTGATCCCTTCTGATCTGCCCTCCTTGGATTCTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523758.1
CDS CAA 72 bp AAGGTGAAGAGGGTGTATTTGGTTGTGCAGGTTCTGTaGCCAGGGTATCTCCTGGAGACCTCTTCCCAATCT +
Preference number: 6 (lower is better)
Translates to: KVKRVYLVVQVL*PGYLLETSSQS
Trigger: AGATTGGGAAGAGGTCTCCAGGAGATACCCTGGCAACAGAACCTGCACAACCAAATACACCCTCTTCACCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327245.10
ENST00000517802.5
ENST00000518411.5
ENST00000521033.5
CDS CAA 90 bp ATGACTTTATCCGATTTGTACCTCCGGAGGTCTTCCCAAGCGTCCTaGATGGCAGTGACTGCCAGGATAACACAGATTGGTATCATGCTC +
Preference number: 6 (lower is better)
Translates to: MTLSDLYLRRSSQAS*MAVTARITQIGIML
Trigger: GAGCATGATACCAATCTGTGTTATCCTGGCAGTCACTGCCATCAAGGACGCTTGGGAAGACCTCCGGAGGTACAAATCGGATAAAGTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326831.7
ENST00000642502.1
CDS CAA 90 bp TTTAGAAAGAGGGATGGAGCCCTTGGGAGCTTCTATACCATTTTCTaGGTGAGAATACTCGCTGCCCATGATGGTGCAACGTCGGAACAC +
Preference number: 6 (lower is better)
Translates to: FRKRDGALGSFYTIF*VRILAAHDGATSEH
Trigger: GTGTTCCGACGTTGCACCATCATGGGCAGCGAGTATTCTCACCAAGAAAATGGTATAGAAGCTCCCAAGGGCTCCATCCCTCTTTCTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326831.7
ENST00000517802.5
ENST00000521033.5
CDS CAA 90 bp GAGGTGATGGATGGTGTCTTGGAAGGTAAGCGGAATCCAAAGAGCTaGCGGTCTGGCTTCTGTAGTTCACGAAATTGCTTTAGCTCTTCC +
Preference number: 6 (lower is better)
Translates to: EVMDGVLEGKRNPKS*RSGFCSSRNCFSSS
Trigger: GGAAGAGCTAAAGCAATTTCGTGAACTACAGAAGCCAGACCGCAAGCTCTTTGGATTCCGCTTACCTTCCAAGACACCATCCATCACCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS CAA 90 bp AGAAGGGGTCAAGGGTTATGTGGACCAGTGACTAGGTGGCCTCTGTaGAGTTTGTACAGATTTCTGCAGCTCCTCATATGGTCAGTGAAC +
Preference number: 6 (lower is better)
Translates to: RRGQGLCGPVTRWPL*SLYRFLQLLIWSVN
Trigger: GTTCACTGACCATATGAGGAGCTGCAGAAATCTGTACAAACTCAACAGAGGCCACCTAGTCACTGGTCCACATAACCCTTGACCCCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS TCA 72 bp TGGCCCAAGTCCTCTGCGATGTTGAGGGCTCGACATTaGATGGATAAATCGGTCTCTTCATCATACAGGTCA +
Preference number: 6 (lower is better)
Translates to: WPKSSAMLRARH*MDKSVSSSYRS
Trigger: TGACCTGTATGATGAAGAGACCGATTTATCCATTCAATGTCGAGCCCTCAACATCGCAGAGGACTTGGGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000326831.7
ENST00000327245.10
ENST00000517802.5
ENST00000520108.1
ENST00000521033.5
ENST00000642502.1
CDS TCA 72 bp AGATGTACTGGATCTGGCCCAAGTCCTCTGCGATGTTaGGGGCTCGACATTGAATGGATAAATCGGTCTCTT +
Preference number: 6 (lower is better)
Translates to: RCTGSGPSPLRC*GLDIEWINRSL
Trigger: AAGAGACCGATTTATCCATTCAATGTCGAGCCCTCAACATCGCAGAGGACTTGGGCCAGATCCAGTACATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000326831.7
ENST00000327245.10
ENST00000517802.5
ENST00000520108.1
ENST00000521033.5
ENST00000642502.1
CDS GCA 72 bp CCTCTTCGCTTACAACCTTCTTGGCAATGCATAGTGTaGGCAGGCCATCTCTTGCATACAAGTCTAGATGCT +
Preference number: 6 (lower is better)
Translates to: PLRLQPSWQCIV*AGHLLHTSLDA
Trigger: AGCATCTAGACTTGTATGCAAGAGATGGCCTGCGCACACTATGCATTGCCAAGAAGGTTGTAAGCGAAGAGG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327245.10
ENST00000520108.1
ENST00000642502.1
CDS GCA 72 bp GACTCCGTGGAAAATGGTCCATGTCTTCATTTCCATTaGCTGGTGCAAAAGGATTGTGGTGAGGGAGATGGT +
Preference number: 6 (lower is better)
Translates to: DSVENGPCLHFH*LVQKDCGEGDG
Trigger: ACCATCTCCCTCACCACAATCCTTTTGCACCAGGCAATGGAAATGAAGACATGGACCATTTTCCACGGAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS CCA 72 bp AGGTGGTTGTTGGGTTTCTCACACACGATGGTATTGTaGAAAAGCTCTGGTTCGAACTGTACCTCCTGCTGT +
Preference number: 6 (lower is better)
Translates to: RWLLGFSHTMVL*KSSGSNCTSCC
Trigger: ACAGCAGGAGGTACAGTTCGAACCAGAGCTTTTCCACAATACCATCGTGTGTGAGAAACCCAACAACCACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326831.7
ENST00000327245.10
ENST00000517802.5
ENST00000521033.5
ENST00000642502.1
CDS CCA 72 bp CCGTGGAAAATGGTCCATGTCTTCATTTCCATTGCCTaGTGCAAAAGGATTGTGGTGAGGGAGATGGTGTTG +
Preference number: 6 (lower is better)
Translates to: PWKMVHVFISIA*CKRIVVREMVL
Trigger: CAACACCATCTCCCTCACCACAATCCTTTTGCACCAGGCAATGGAAATGAAGACATGGACCATTTTCCACGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS CAA 72 bp ATGAGGCACTCTCGGTTATTGATGACTTTATCCGATTaGTACCTCCGGAGGTCTTCCCAAGCGTCCTTGATG +
Preference number: 6 (lower is better)
Translates to: MRHSRLLMTLSD*YLRRSSQASLM
Trigger: CATCAAGGACGCTTGGGAAGACCTCCGGAGGTACAAATCGGATAAAGTCATCAATAACCGAGAGTGCCTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326831.7
ENST00000642502.1
CDS CAA 72 bp TTGAGGTGGTTGTTGGGTTTCTCACACACGATGGTATaGTGGAAAAGCTCTGGTTCGAACTGTACCTCCTGC +
Preference number: 6 (lower is better)
Translates to: LRWLLGFSHTMV*WKSSGSNCTSC
Trigger: GCAGGAGGTACAGTTCGAACCAGAGCTTTTCCACAATACCATCGTGTGTGAGAAACCCAACAACCACCTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326831.7
ENST00000327245.10
ENST00000517802.5
ENST00000521033.5
ENST00000642502.1
CDS CAA 72 bp CAAGGGTTATGTGGACCAGTGACTAGGTGGCCTCTGTaGAGTTTGTACAGATTTCTGCAGCTCCTCATATGG +
Preference number: 6 (lower is better)
Translates to: QGLCGPVTRWPL*SLYRFLQLLIW
Trigger: CCATATGAGGAGCTGCAGAAATCTGTACAAACTCAACAGAGGCCACCTAGTCACTGGTCCACATAACCCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS CAA 90 bp GGTCTCTTCATCATACAGGTCAAGGTCATTGCTCAAGAAGAACACTaGCCCGAGCTTCACCAGCTCAATGGAGACATACAAAGAGATGGG +
Preference number: 6 (lower is better)
Translates to: GLFIIQVKVIAQEEH*PELHQLNGDIQRDG
Trigger: CCCATCTCTTTGTATGTCTCCATTGAGCTGGTGAAGCTCGGGCAAGTGTTCTTCTTGAGCAATGACCTTGACCTGTATGATGAAGAGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326831.7
ENST00000327245.10
ENST00000517802.5
ENST00000521033.5
ENST00000642502.1
CDS CAA 90 bp TTGTATAGCTCAGGCAATGCCAGGAGTGTTTCTGCAGAGATGTCTTaGTCAAGGACTCCAAAGACAAGAGGAGGCAAGGAGGTAAAGAAG +
Preference number: 6 (lower is better)
Translates to: LYSSGNARSVSAEMS*SRTPKTRGGKEVKK
Trigger: CTTCTTTACCTCCTTGCCTCCTCTTGTCTTTGGAGTCCTTGACAAAGACATCTCTGCAGAAACACTCCTGGCATTGCCTGAGCTATACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS CAA 90 bp GTACCCAAATCCCACCTAGAAGCCTGTGTCCTCTTGGTTGAGGGGTaGCTCTACACGTTGATATCTGCAGATATCAATACAGAGAATCAC +
Preference number: 6 (lower is better)
Translates to: VPKSHLEACVLLVEG*LYTLISADINTENH
Trigger: GTGATTCTCTGTATTGATATCTGCAGATATCAACGTGTAGAGCAACCCCTCAACCAAGAGGACACAGGCTTCTAGGTGGGATTTGGGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520108.1
CDS TCA 72 bp CTATACCATTTTCTTGGTGAGAATACTCGCTGCCCATaGTGGTGCAACGTCGGAACACCATCTTGTTCTCTG +
Preference number: 6 (lower is better)
Translates to: LYHFLGENTRCP*WCNVGTPSCSL
Trigger: CAGAGAACAAGATGGTGTTCCGACGTTGCACCATCATGGGCAGCGAGTATTCTCACCAAGAAAATGGTATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326831.7
ENST00000517802.5
ENST00000521033.5
CDS TCA 72 bp CCTATTGAGCAGACTCCAGTAGAAGAAAACAGTGCTTaGAAGTGGCGGTATTTCTCTCGCACACCTTGGCTA +
Preference number: 6 (lower is better)
Translates to: PIEQTPVEENSA*KWRYFSRTPWL
Trigger: TAGCCAAGGTGTGCGAGAGAAATACCGCCACTTTCAAGCACTGTTTTCTTCTACTGGAGTCTGCTCAATAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327245.10
ENST00000517802.5
ENST00000518411.5
ENST00000520098.5
ENST00000520975.1
ENST00000521033.5
CDS CCA 72 bp ATTTGGTTGTGCAGGTTCTGTTGCCAGGGTATCTCCTaGAGACCTCTTCCCAATCTTGATGGAATATGCTGT +
Preference number: 6 (lower is better)
Translates to: IWLCRFCCQGIS*RPLPNLDGICC
Trigger: ACAGCATATTCCATCAAGATTGGGAAGAGGTCTCCAGGAGATACCCTGGCAACAGAACCTGCACAACCAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327245.10
ENST00000517802.5
ENST00000518411.5
ENST00000521033.5
CDS CCA 72 bp ATTGCTTATGGAGGGCATTGCAACTTTGGATGTGGGTaGAAGTTCTCAGGGAGAAGTTTCTCCAACACTCTG +
Preference number: 6 (lower is better)
Translates to: IAYGGHCNFGCG*KFSGRSFSNTL
Trigger: CAGAGTGTTGGAGAAACTTCTCCCTGAGAACTTCCACCCACATCCAAAGTTGCAATGCCCTCCATAAGCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517815.1
CDS CCA 72 bp TGTCATTGCTTATGGAGGGCATTGCAACTTTGGATGTaGGTGGAAGTTCTCAGGGAGAAGTTTCTCCAACAC +
Preference number: 6 (lower is better)
Translates to: CHCLWRALQLWM*VEVLREKFLQH
Trigger: GTGTTGGAGAAACTTCTCCCTGAGAACTTCCACCCACATCCAAAGTTGCAATGCCCTCCATAAGCAATGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517815.1
CDS CAA 72 bp GACGAAGGACAACACGGTGTACTTGCTGGTCTTGATTaGATTCCCACGATGATGTCTGTTGGGGTTCTCTTT +
Preference number: 6 (lower is better)
Translates to: DEGQHGVLAGLD*IPTMMSVGVLF
Trigger: AAAGAGAACCCCAACAGACATCATCGTGGGAATCAAATCAAGACCAGCAAGTACACCGTGTTGTCCTTCGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326831.7
ENST00000642502.1
CDS CAA 72 bp GATAAATCGGTCTCTTCATCATACAGGTCAAGGTCATaGCTCAAGAAGAACACTTGCCCGAGCTTCACCAGC +
Preference number: 6 (lower is better)
Translates to: DKSVSSSYRSRS*LKKNTCPSFTS
Trigger: GCTGGTGAAGCTCGGGCAAGTGTTCTTCTTGAGCAATGACCTTGACCTGTATGATGAAGAGACCGATTTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326831.7
ENST00000327245.10
ENST00000517802.5
ENST00000521033.5
ENST00000642502.1
CDS CAA 72 bp GATGGTGTCTTGGAAGGTAAGCGGAATCCAAAGAGCTaGCGGTCTGGCTTCTGTAGTTCACGAAATTGCTTT +
Preference number: 6 (lower is better)
Translates to: DGVLEGKRNPKS*RSGFCSSRNCF
Trigger: AAAGCAATTTCGTGAACTACAGAAGCCAGACCGCAAGCTCTTTGGATTCCGCTTACCTTCCAAGACACCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS CAA 90 bp CAAATGTCCTTATGTCTGTCATTGCTTATGGAGGGCATTGCAACTTaGGATGTGGGTGGAAGTTCTCAGGGAGAAGTTTCTCCAACACTC +
Preference number: 6 (lower is better)
Translates to: QMSLCLSLLMEGIAT*DVGGSSQGEVSPTL
Trigger: GAGTGTTGGAGAAACTTCTCCCTGAGAACTTCCACCCACATCCAAAGTTGCAATGCCCTCCATAAGCAATGACAGACATAAGGACATTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517815.1
CDS TCA 72 bp GGAAAAAGTATCTTGGGAGAAGAGCAACAACTGGTGTaGGAAAGCAGACGAGGTAGAAAGTGGGGTTTGAGA +
Preference number: 6 (lower is better)
Translates to: GKSILGEEQQLV*ESRRGRKWGLR
Trigger: TCTCAAACCCCACTTTCTACCTCGTCTGCTTTCTCACACCAGTTGTTGCTCTTCTCCCAAGATACTTTTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS GCA 72 bp TCATACAGGTCAAGGTCATTGCTCAAGAAGAACACTTaGCCGAGCTTCACCAGCTCAATGGAGACATACAAA +
Preference number: 6 (lower is better)
Translates to: SYRSRSLLKKNT*PSFTSSMETYK
Trigger: TTTGTATGTCTCCATTGAGCTGGTGAAGCTCGGGCAAGTGTTCTTCTTGAGCAATGACCTTGACCTGTATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326831.7
ENST00000327245.10
ENST00000517802.5
ENST00000521033.5
ENST00000642502.1
CDS GCA 72 bp AATGTCCTTATGTCTGTCATTGCTTATGGAGGGCATTaGAACTTTGGATGTGGGTGGAAGTTCTCAGGGAGA +
Preference number: 6 (lower is better)
Translates to: NVLMSVIAYGGH*NFGCGWKFSGR
Trigger: TCTCCCTGAGAACTTCCACCCACATCCAAAGTTGCAATGCCCTCCATAAGCAATGACAGACATAAGGACATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517815.1
CDS CCA 72 bp AGGACAATGGCCAATGGTAACATGGTGATTTCTCTGTaGAAGACTTCCATGGAGGGCATCCAGTTCAAAATC +
Preference number: 6 (lower is better)
Translates to: RTMANGNMVISL*KTSMEGIQFKI
Trigger: GATTTTGAACTGGATGCCCTCCATGGAAGTCTTCCACAGAGAAATCACCATGTTACCATTGGCCATTGTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327245.10
ENST00000517802.5
ENST00000521033.5
CDS CCA 72 bp GTGCAAAAGGATTGTGGTGAGGGAGATGGTGTTGATTaGTGTCCCAAAGGTAAAGACATCTATATCAGAGCC +
Preference number: 6 (lower is better)
Translates to: VQKDCGEGDGVD*CPKGKDIYIRA
Trigger: GGCTCTGATATAGATGTCTTTACCTTTGGGACACCAATCAACACCATCTCCCTCACCACAATCCTTTTGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS CAA 72 bp ATCATACAGGTCAAGGTCATTGCTCAAGAAGAACACTaGCCCGAGCTTCACCAGCTCAATGGAGACATACAA +
Preference number: 6 (lower is better)
Translates to: IIQVKVIAQEEH*PELHQLNGDIQ
Trigger: TTGTATGTCTCCATTGAGCTGGTGAAGCTCGGGCAAGTGTTCTTCTTGAGCAATGACCTTGACCTGTATGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326831.7
ENST00000327245.10
ENST00000517802.5
ENST00000521033.5
ENST00000642502.1
CDS CAA 72 bp GACAAGGTCTCCAACCACAGGGCAGCATCTCGAACCTaGGTCAGTAGGTTTTTATCTGGAGTTACATCTTTT +
Preference number: 6 (lower is better)
Translates to: DKVSNHRAASRT*VSRFLSGVTSF
Trigger: AAAAGATGTAACTCCAGATAAAAACCTACTGACCAAGGTTCGAGATGCTGCCCTGTGGTTGGAGACCTTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327245.10
ENST00000520108.1
ENST00000642502.1
CDS CAA 90 bp TTAAATTTGTTGAGGTGGTTGTTGGGTTTCTCACACACGATGGTATaGTGGAAAAGCTCTGGTTCGAACTGTACCTCCTGCTGTGAGAAG +
Preference number: 6 (lower is better)
Translates to: LNLLRWLLGFSHTMV*WKSSGSNCTSCCEK
Trigger: CTTCTCACAGCAGGAGGTACAGTTCGAACCAGAGCTTTTCCACAATACCATCGTGTGTGAGAAACCCAACAACCACCTCAACAAATTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326831.7
ENST00000327245.10
ENST00000517802.5
ENST00000521033.5
ENST00000642502.1
CDS GCA 72 bp TGGAAAATGGTCCATGTCTTCATTTCCATTGCCTGGTaGAAAAGGATTGTGGTGAGGGAGATGGTGTTGATT +
Preference number: 6 (lower is better)
Translates to: WKMVHVFISIAW*KRIVVREMVLI
Trigger: AATCAACACCATCTCCCTCACCACAATCCTTTTGCACCAGGCAATGGAAATGAAGACATGGACCATTTTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327245.10
ENST00000642502.1
CDS CCA 72 bp TTATTATTACAAAGAGACCAGAAGCTCCCATGTGAATaGTCTGCTATCACCATGGCAAAGGGGATACAGCTG +
Preference number: 6 (lower is better)
Translates to: LLLQRDQKLPCE*SAITMAKGIQL
Trigger: CAGCTGTATCCCCTTTGCCATGGTGATAGCAGACCATTCACATGGGAGCTTCTGGTCTCTTTGTAATAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326831.7
CDS CCA 72 bp ACAAGGTCTCCAACCACAGGGCAGCATCTCGAACCTTaGTCAGTAGGTTTTTATCTGGAGTTACATCTTTTT +
Preference number: 6 (lower is better)
Translates to: TRSPTTGQHLEP*SVGFYLELHLF
Trigger: AAAAAGATGTAACTCCAGATAAAAACCTACTGACCAAGGTTCGAGATGCTGCCCTGTGGTTGGAGACCTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327245.10
ENST00000520108.1
ENST00000642502.1
CDS CAA 72 bp TTGGAGCAGTTTATTGCTTTATCAAAGCGGTGTCTCTaGAAGTCCTCCATGCCATCCTTGATCATGATGACG +
Preference number: 6 (lower is better)
Translates to: LEQFIALSKRCL*KSSMPSLIMMT
Trigger: CGTCATCATGATCAAGGATGGCATGGAGGACTTCAAGAGACACCGCTTTGATAAAGCAATAAACTGCTCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327245.10
ENST00000517802.5
ENST00000521033.5
CDS CAA 72 bp TTATGTCTGTCATTGCTTATGGAGGGCATTGCAACTTaGGATGTGGGTGGAAGTTCTCAGGGAGAAGTTTCT +
Preference number: 6 (lower is better)
Translates to: LCLSLLMEGIAT*DVGGSSQGEVS
Trigger: AGAAACTTCTCCCTGAGAACTTCCACCCACATCCAAAGTTGCAATGCCCTCCATAAGCAATGACAGACATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517815.1
CDS CAA 90 bp ATTCGAATGTTGGAGCAGTTTATTGCTTTATCAAAGCGGTGTCTCTaGAAGTCCTCCATGCCATCCTTGATCATGATGACGAACAGGACA +
Preference number: 6 (lower is better)
Translates to: IRMLEQFIALSKRCL*KSSMPSLIMMTNRT
Trigger: TGTCCTGTTCGTCATCATGATCAAGGATGGCATGGAGGACTTCAAGAGACACCGCTTTGATAAAGCAATAAACTGCTCCAACATTCGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327245.10
ENST00000517802.5
ENST00000521033.5
CDS TCA 72 bp ATAAAGTGCTTTGTCTGGCACCAGACAAAGATCAGCTaGAGGGGAACCACATATGGGATAACTTCTAACCTT +
Preference number: 6 (lower is better)
Translates to: IKCFVWHQTKIS*RGTTYGITSNL
Trigger: AAGGTTAGAAGTTATCCCATATGTGGTTCCCCTTCAGCTGATCTTTGTCTGGTGCCAGACAAAGCACTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326831.7
ENST00000517802.5
ENST00000521033.5
CDS CCA 72 bp GGTGGAAGTTCTCAGGGAGAAGTTTCTCCAACACTCTaGATATTTCCTTGTATCTCAACTAAGGACCAAAGA +
Preference number: 6 (lower is better)
Translates to: GGSSQGEVSPTL*IFPCISTKDQR
Trigger: TCTTTGGTCCTTAGTTGAGATACAAGGAAATATCCAGAGTGTTGGAGAAACTTCTCCCTGAGAACTTCCACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517815.1
CDS CCA 72 bp TTCCTTTACCTGGAGCTGAAATATGTCTTCTGCCCCTaGGATTACTCAGAACAAGGCACAGTTTATAGTACT +
Preference number: 6 (lower is better)
Translates to: FLYLELKYVFCP*DYSEQGTVYST
Trigger: AGTACTATAAACTGTGCCTTGTTCTGAGTAATCCCAGGGGCAGAAGACATATTTCAGCTCCAGGTAAAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523758.1
CDS CAA 72 bp ATAGCATTAGGAGAAATACCTAAGGTAGATGATGGGTaGGTGGGTGCTGCAAACCACCATGACACATGTATA +
Preference number: 6 (lower is better)
Translates to: IALGEIPKVDDG*VGAANHHDTCI
Trigger: TATACATGTGTCATGGTGGTTTGCAGCACCCACCAACCCATCATCTACCTTAGGTATTTCTCCTAATGCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326831.7
ENST00000517802.5
CDS CAA 72 bp AGCAGCAGGCGAAGATTCTTCACACTGTTGCTTTCATaGAAACAAATGTCACCAGTCGGTTCTGATTCTCTT +
Preference number: 6 (lower is better)
Translates to: SSRRRFFTLLLS*KQMSPVGSDSL
Trigger: AAGAGAATCAGAACCGACTGGTGACATTTGTTTCAATGAAAGCAACAGTGTGAAGAATCTTCGCCTGCTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518411.5
CDS TCA 72 bp AAAAGGATGAGTTCATGTCCTTTGCAGGGACACAGATaGACAGGAAACCATCAGCAAACTAACACAAGAACA +
Preference number: 6 (lower is better)
Translates to: KRMSSCPLQGHR*TGNHQQTNTRT
Trigger: TGTTCTTGTGTTAGTTTGCTGATGGTTTCCTGTTCATCTGTGTCCCTGCAAAGGACATGAACTCATCCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326831.7
ENST00000517802.5
CDS CAA 72 bp AAATTCCTAAGCCTTGGTTGTGTGACTGGCACACAATaGGGAAATGTCTCCAATCCATTGCTGACAGATAAA +
Preference number: 6 (lower is better)
Translates to: KFLSLGCVTGTQ*GNVSNPLLTDK
Trigger: TTTATCTGTCAGCAATGGATTGGAGACATTTCCCAATTGTGTGCCAGTCACACAACCAAGGCTTAGGAATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326831.7
ENST00000517802.5
ENST00000521033.5
CDS TCA 72 bp AAGATTCCTCAAGGATCTAGAACCAGAAATACCATTTaGCCAGCAATCCCATTACTGGGTATATACCCAAAG +
Preference number: 6 (lower is better)
Translates to: KIPQGSRTRNTI*PAIPLLGIYPK
Trigger: CTTTGGGTATATACCCAGTAATGGGATTGCTGGTCAAATGGTATTTCTGGTTCTAGATCCTTGAGGAATCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326831.7
CDS CAA 90 bp GGAATACTTTTACACTGTTGGTGGGAGTACAAATTAGTTCAACCATaGTGGAAGACAAAGATTCCTCAAGGATCTAGAACCAGAAATACC +
Preference number: 6 (lower is better)
Translates to: GILLHCWWEYKLVQP*WKTKIPQGSRTRNT
Trigger: GGTATTTCTGGTTCTAGATCCTTGAGGAATCTTTGTCTTCCACAATGGTTGAACTAATTTGTACTCCCACCAACAGTGTAAAAGTATTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326831.7
CDS CCA 72 bp GGATGTAGAGAAACAGGAATACTTTTACACTGTTGGTaGGAGTACAAATTAGTTCAACCATTGTGGAAGACA +
Preference number: 6 (lower is better)
Translates to: GCRETGILLHCW*EYKLVQPLWKT
Trigger: TGTCTTCCACAATGGTTGAACTAATTTGTACTCCCACCAACAGTGTAAAAGTATTCCTGTTTCTCTACATCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326831.7
CDS GCA 72 bp TCAATGCTCTCTATCCTCATCAACAAATTTAAGCAGTaGCAAATGTTTACACTGGTGGTGGAAATACAATTG +
Preference number: 6 (lower is better)
Translates to: SMLSILINKFKQ*QMFTLVVEIQL
Trigger: CAATTGTATTTCCACCACCAGTGTAAACATTTGGCACTGCTTAAATTTGTTGATGAGGATAGAGAGCATTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517815.1
CDS CAA 72 bp CAGTGCCAAATGTTTACACTGGTGGTGGAAATACAATaGTTAATGGCTCAAAACCCACAAAATGTCTGTTTA +
Preference number: 6 (lower is better)
Translates to: QCQMFTLVVEIQ*LMAQNPQNVCL
Trigger: TAAACAGACATTTTGTGGGTTTTGAGCCATTAACAATTGTATTTCCACCACCAGTGTAAACATTTGGCACTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517815.1
CDS CAA 90 bp ATGAATAATAGGAAAAACTACTTACTCTTCACACTGTTGCTTTCATaGAAACAAATGTCACCAGTCGGTTCTGATTCTCTTGTCAAAGGA +
Preference number: 6 (lower is better)
Translates to: MNNRKNYLLFTLLLS*KQMSPVGSDSLVKG
Trigger: TCCTTTGACAAGAGAATCAGAACCGACTGGTGACATTTGTTTCAATGAAAGCAACAGTGTGAAGAGTAAGTAGTTTTTCCTATTATTCAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327245.10
ENST00000517802.5
ENST00000521033.5