Pregenerated sensors for ATOH7 (Homo sapiens)
Ensembl gene IDs: ENSG00000179774Ensembl transcript IDs: ENST00000373673.5
Found 68 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCCTCGAGGATTGCATCCTTAGAATCCTGGGCCGCCGGAGGCTTCTaGGCTACTTGGGGCAGGGCCGAGGCTCGGAGCGGCTGCCGGACA | + |
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Preference number: 1 (lower is better) Translates to: SSRIASLESWAAGGF*ATWGRAEARSGCRT Trigger: TGTCCGGCAGCCGCTCCGAGCCTCGGCCCTGCCCCAAGTAGCCCAGAAGCCTCCGGCGGCCCAGGATTCTAAGGATGCAATCCTCGAGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373673.5 |
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| 3UTR CAA 90 bp | GATTGCATCCTTAGAATCCTGGGCCGCCGGAGGCTTCTGGGCTACTaGGGGCAGGGCCGAGGCTCGGAGCGGCTGCCGGACACCCACCCC | + |
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Preference number: 2 (lower is better) Translates to: DCILRILGRRRLLGY*GQGRGSERLPDTHP Trigger: GGGGTGGGTGTCCGGCAGCCGCTCCGAGCCTCGGCCCTGCCCCAAGTAGCCCAGAAGCCTCCGGCGGCCCAGGATTCTAAGGATGCAATC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373673.5 |
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| 3UTR-3UTR CCA 90 bp | CACACACAATGCACTAAAGCAAAAACGCATTTACACAACAGGAAGGTAGCTCTGGCCGCCGGAGGCTTCTaGGCTACTTGGGGCAGGGCC | + |
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Preference number: 2 (lower is better) Translates to: HTQCTKAKTHLHNRKVALAAGGF*ATWGRA Trigger: GGCCCTGCCCCAAGTAGCCCAGAAGCCTCCGGCGGC...CAGAGCTACCTTCCTGTTGTGTAAATGCGTTTTTGCTTTAGTGCATTGTGTGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373673.5 |
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| 3UTR CCA 72 bp | ATTGCATCCTTAGAATCCTGGGCCGCCGGAGGCTTCTaGGCTACTTGGGGCAGGGCCGAGGCTCGGAGCGGC | + |
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Preference number: 3 (lower is better) Translates to: IASLESWAAGGF*ATWGRAEARSG Trigger: GCCGCTCCGAGCCTCGGCCCTGCCCCAAGTAGCCCAGAAGCCTCCGGCGGCCCAGGATTCTAAGGATGCAAT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373673.5 |
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| 3UTR-3UTR CAA 90 bp | CAAACACAAGTAATGGATACTGTAACTTCACCCGAACAGGACAAACTCACAAAGAGGCTTCTGGGCTACTaGGGGCAGGGCCGAGGCTCG | + |
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Preference number: 3 (lower is better) Translates to: QTQVMDTVTSPEQDKLTKRLLGY*GQGRGS Trigger: CGAGCCTCGGCCCTGCCCCAAGTAGCCCAGAAGCCT...CTTTGTGAGTTTGTCCTGTTCGGGTGAAGTTACAGTATCCATTACTTGTGTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373673.5 |
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| 3UTR TCA 72 bp | GCGTCCATAGGTCTGATGATGCGAATAAAGGTAATCTaGGAATCGACTAATTTTCCTCGAGGATTGCATCCT | + |
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Preference number: 3 (lower is better) Translates to: ASIGLMMRIKVI*ESTNFPRGLHP Trigger: AGGATGCAATCCTCGAGGAAAATTAGTCGATTCTCAGATTACCTTTATTCGCATCATCAGACCTATGGACGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373673.5 |
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| CDS-3UTR TCA 90 bp | CTGGGCCGCCGGAGGCTTCTGGGCTACTTGGGGCAGGGCCGAGGCTCGGAGCGGGGTCGAAGGCAGTGTTaGGCCCCTGCATGCGGCGGC | + |
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Preference number: 4 (lower is better) Translates to: LGRRRLLGYLGQGRGSERGRRQC*APACGG Trigger: GCCGCCGCATGCAGGGGCTCAACACTGCCTTCGACC...CCGCTCCGAGCCTCGGCCCTGCCCCAAGTAGCCCAGAAGCCTCCGGCGGCCCAG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000373673.5 |
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| CDS-3UTR GCA 90 bp | AGAATCCTGGGCCGCCGGAGGCTTCTGGGCTACTTGGGGCAGGGCCGAGGCTCGGCGGGCCGCTGGGCTTaGAGGACTTCATCCCCGGCC | + |
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Preference number: 4 (lower is better) Translates to: RILGRRRLLGYLGQGRGSAGRWA*RTSSPA Trigger: GGCCGGGGATGAAGTCCTGCAAGCCCAGCGGCCCGC...CGAGCCTCGGCCCTGCCCCAAGTAGCCCAGAAGCCTCCGGCGGCCCAGGATTCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373673.5 |
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| CDS-3UTR GCA 90 bp | AGAATCCTGGGCCGCCGGAGGCTTCTGGGCTACTTGGGGCAGGGCCGAGGCTCGGCAGTGTTGAGCCCCTaGATGCGGCGGCGCTCGCGC | + |
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Preference number: 4 (lower is better) Translates to: RILGRRRLLGYLGQGRGSAVLSP*MRRRSR Trigger: GCGCGAGCGCCGCCGCATGCAGGGGCTCAACACTGC...CGAGCCTCGGCCCTGCCCCAAGTAGCCCAGAAGCCTCCGGCGGCCCAGGATTCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373673.5 |
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| CDS-3UTR CCA 90 bp | GGCTACTTGGGGCAGGGCCGAGGCTCGGAGCGGCTGCCGGACACCCACCCCCGCGCATCCTTAGAATCCTaGGCCGCCGGAGGCTTCTGG | + |
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Preference number: 4 (lower is better) Translates to: GYLGQGRGSERLPDTHPRASLES*AAGGFW Trigger: CCAGAAGCCTCCGGCGGCCCAGGATTCTAAGGATGC...GCGGGGGTGGGTGTCCGGCAGCCGCTCCGAGCCTCGGCCCTGCCCCAAGTAGCC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373673.5 |
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| 3UTR CAA 72 bp | CTTAGAATCCTGGGCCGCCGGAGGCTTCTGGGCTACTaGGGGCAGGGCCGAGGCTCGGAGCGGCTGCCGGAC | + |
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Preference number: 4 (lower is better) Translates to: LRILGRRRLLGY*GQGRGSERLPD Trigger: GTCCGGCAGCCGCTCCGAGCCTCGGCCCTGCCCCAAGTAGCCCAGAAGCCTCCGGCGGCCCAGGATTCTAAG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373673.5 |
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| CDS-3UTR GCA 90 bp | GCTTCTGGGCTACTTGGGGCAGGGCCGAGGCTCGGAGCGGCTGCCGGACACCCAACTGGGGAACCACCCTaGGTAAGCGGTCGAAGGCAG | + |
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Preference number: 4 (lower is better) Translates to: ASGLLGAGPRLGAAAGHPTGEPP*VSGRRQ Trigger: CTGCCTTCGACCGCTTACGCAGGGTGGTTCCCCAGT...TGGGTGTCCGGCAGCCGCTCCGAGCCTCGGCCCTGCCCCAAGTAGCCCAGAAGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373673.5 |
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| CDS-3UTR CCA 90 bp | CTGGGCCGCCGGAGGCTTCTGGGCTACTTGGGGCAGGGCCGAGGCTCGGAGCGGAAGCCGAAGAGTCTCTaGCTGTACAGCTCGCTCTCG | + |
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Preference number: 4 (lower is better) Translates to: LGRRRLLGYLGQGRGSERKPKSL*LYSSLS Trigger: CGAGAGCGAGCTGTACAGCCAGAGACTCTTCGGCTT...CCGCTCCGAGCCTCGGCCCTGCCCCAAGTAGCCCAGAAGCCTCCGGCGGCCCAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373673.5 |
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| CDS-3UTR GCA 90 bp | GGCTTCTGGGCTACTTGGGGCAGGGCCGAGGCTCGGAGCGGCTGCCGGACACCCTTTACAGTGGGGGAGTaGGGGACTCGGCCTTCTGTT | + |
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Preference number: 4 (lower is better) Translates to: GFWATWGRAEARSGCRTPFTVGE*GTRPSV Trigger: AACAGAAGGCCGAGTCCCGCACTCCCCCACTGTAAA...GGGTGTCCGGCAGCCGCTCCGAGCCTCGGCCCTGCCCCAAGTAGCCCAGAAGCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000373673.5 |
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| CDS-3UTR CCA 90 bp | GGGCTACTTGGGGCAGGGCCGAGGCTCGGAGCGGCTGCCGGACACCCACCCCCGGCAGGGTCTCGTACTTaGACAGCTTTTTATCCTGGC | + |
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Preference number: 4 (lower is better) Translates to: GLLGAGPRLGAAAGHPPPAGSRT*TAFYPG Trigger: GCCAGGATAAAAAGCTGTCCAAGTACGAGACCCTGC...CGGGGGTGGGTGTCCGGCAGCCGCTCCGAGCCTCGGCCCTGCCCCAAGTAGCCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000373673.5 |
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| CDS-3UTR CCA 90 bp | CTGGGCCGCCGGAGGCTTCTGGGCTACTTGGGGCAGGGCCGAGGCTCGGAGCGGGCCTTTCAAGTCCTCTaGGAAAGCCTGAGACTCCTT | + |
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Preference number: 4 (lower is better) Translates to: LGRRRLLGYLGQGRGSERAFQVL*ESLRLL Trigger: AAGGAGTCTCAGGCTTTCCCAGAGGACTTGAAAGGC...CCGCTCCGAGCCTCGGCCCTGCCCCAAGTAGCCCAGAAGCCTCCGGCGGCCCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373673.5 |
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| CDS-3UTR CCA 90 bp | GATTGCATCCTTAGAATCCTGGGCCGCCGGAGGCTTCTGGGCTACTTGGGGCAGGGCGCGCGCCCTAGGTaGCCATCTGGAAGGGCTCGG | + |
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Preference number: 4 (lower is better) Translates to: DCILRILGRRRLLGYLGQGARPR*PSGRAR Trigger: CCGAGCCCTTCCAGATGGCCACCTAGGGCGCGCGCC...CTGCCCCAAGTAGCCCAGAAGCCTCCGGCGGCCCAGGATTCTAAGGATGCAATC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373673.5 |
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| CDS-3UTR GCA 90 bp | GGCTACTTGGGGCAGGGCCGAGGCTCGGAGCGGCTGCCGGACACCCACCCCCGCATTTTCCTCGAGGATTaGATCCTTAGAATCCTGGGC | + |
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Preference number: 4 (lower is better) Translates to: GYLGQGRGSERLPDTHPRIFLED*ILRILG Trigger: GCCCAGGATTCTAAGGATGCAATCCTCGAGGAAAAT...GCGGGGGTGGGTGTCCGGCAGCCGCTCCGAGCCTCGGCCCTGCCCCAAGTAGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000373673.5 |
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| CDS-3UTR TCA 90 bp | GGCTTCTGGGCTACTTGGGGCAGGGCCGAGGCTCGGAGCGGCTGCCGGACACCCTCCTTTGCAGGAAGATaGACTCTTTCCCGAAGCTCA | + |
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Preference number: 4 (lower is better) Translates to: GFWATWGRAEARSGCRTPSFAGR*TLSRSS Trigger: TGAGCTTCGGGAAAGAGTTCATCTTCCTGCAAAGGA...GGGTGTCCGGCAGCCGCTCCGAGCCTCGGCCCTGCCCCAAGTAGCCCAGAAGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373673.5 |
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| CDS-3UTR CCA 90 bp | CTCGAGGATTGCATCCTTAGAATCCTGGGCCGCCGGAGGCTTCTGGGCTACTTGGACCTGCGCGTGGGCTaGTCTCTCGAGCCGCTTCCC | + |
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Preference number: 4 (lower is better) Translates to: LEDCILRILGRRRLLGYLDLRVG*SLEPLP Trigger: GGGAAGCGGCTCGAGAGACCAGCCCACGCGCAGGTC...CAAGTAGCCCAGAAGCCTCCGGCGGCCCAGGATTCTAAGGATGCAATCCTCGAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373673.5 |
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| CDS-3UTR GCA 90 bp | GGGCTACTTGGGGCAGGGCCGAGGCTCGGAGCGGCTGCCGGACACCCACCCCCGAGTGTTTCTACTTCATaGTTGCACACACAATGCACT | + |
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Preference number: 4 (lower is better) Translates to: GLLGAGPRLGAAAGHPPPSVSTS*LHTQCT Trigger: AGTGCATTGTGTGTGCAAGCATGAAGTAGAAACACT...CGGGGGTGGGTGTCCGGCAGCCGCTCCGAGCCTCGGCCCTGCCCCAAGTAGCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373673.5 |
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| CDS-3UTR CCA 90 bp | CTCGAGGATTGCATCCTTAGAATCCTGGGCCGCCGGAGGCTTCTGGGCTACTTGCCGAAGTGCTCACAGTaGAGACCCACCCAGTCCCGC | + |
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Preference number: 4 (lower is better) Translates to: LEDCILRILGRRRLLGYLPKCSQ*RPTQSR Trigger: GCGGGACTGGGTGGGTCTCCACTGTGAGCACTTCGG...CAAGTAGCCCAGAAGCCTCCGGCGGCCCAGGATTCTAAGGATGCAATCCTCGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373673.5 |
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| CDS-3UTR CCA 90 bp | GATTGCATCCTTAGAATCCTGGGCCGCCGGAGGCTTCTGGGCTACTTGGGGCAGTGGAAGGGCTCGGGCTaGAAGCCGAAGAGTCTCTGG | + |
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Preference number: 4 (lower is better) Translates to: DCILRILGRRRLLGYLGQWKGSG*KPKSLW Trigger: CCAGAGACTCTTCGGCTTCCAGCCCGAGCCCTTCCA...CTGCCCCAAGTAGCCCAGAAGCCTCCGGCGGCCCAGGATTCTAAGGATGCAATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373673.5 |
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| CDS-3UTR CCA 90 bp | CTCGAGGATTGCATCCTTAGAATCCTGGGCCGCCGGAGGCTTCTGGGCTACTTGTTATCCTGGCCCCACTaGGGAACCACCCTGCGTAAG | + |
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Preference number: 4 (lower is better) Translates to: LEDCILRILGRRRLLGYLLSWPH*GTTLRK Trigger: CTTACGCAGGGTGGTTCCCCAGTGGGGCCAGGATAA...CAAGTAGCCCAGAAGCCTCCGGCGGCCCAGGATTCTAAGGATGCAATCCTCGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373673.5 |
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| CDS-3UTR CCA 90 bp | CTCGAGGATTGCATCCTTAGAATCCTGGGCCGCCGGAGGCTTCTGGGCTACTTGTCAAATAGTTTACAGTaGGGGAGTGCGGGACTCGGC | + |
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Preference number: 4 (lower is better) Translates to: LEDCILRILGRRRLLGYLSNSLQ*GSAGLG Trigger: GCCGAGTCCCGCACTCCCCCACTGTAAACTATTTGA...CAAGTAGCCCAGAAGCCTCCGGCGGCCCAGGATTCTAAGGATGCAATCCTCGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373673.5 |
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| CDS-3UTR GCA 90 bp | CACACACAATGCACTAAAGCAAAAACGCATTTACACAACAGGAAGGTAGCTCTGCGCCCGCTCAGGACCTaGGCGTGGGCTGGTCTCTCG | + |
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Preference number: 4 (lower is better) Translates to: HTQCTKAKTHLHNRKVALRPLRT*AWAGLS Trigger: CGAGAGACCAGCCCACGCGCAGGTCCTGAGCGGGCG...CAGAGCTACCTTCCTGTTGTGTAAATGCGTTTTTGCTTTAGTGCATTGTGTGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000373673.5 |
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| CDS-3UTR CCA 90 bp | CAAACACAAGTAATGGATACTGTAACTTCACCCGAACAGGACAAACTCACAAAGCCGCCGGCGGGCCGCTaGGCTTGCAGGACTTCATCC | + |
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Preference number: 4 (lower is better) Translates to: QTQVMDTVTSPEQDKLTKPPAGR*ACRTSS Trigger: GGATGAAGTCCTGCAAGCCCAGCGGCCCGCCGGCGG...CTTTGTGAGTTTGTCCTGTTCGGGTGAAGTTACAGTATCCATTACTTGTGTTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373673.5 |
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| CDS-3UTR CCA 90 bp | CAAACACAAGTAATGGATACTGTAACTTCACCCGAACAGGACAAACTCACAAAGCTCAGGACCTGCGCGTaGGCTGGTCTCTCGAGCCGC | + |
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Preference number: 4 (lower is better) Translates to: QTQVMDTVTSPEQDKLTKLRTCA*AGLSSR Trigger: GCGGCTCGAGAGACCAGCCCACGCGCAGGTCCTGAG...CTTTGTGAGTTTGTCCTGTTCGGGTGAAGTTACAGTATCCATTACTTGTGTTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373673.5 |
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| CDS-3UTR GCA 90 bp | TGTGAGCAAACACAAGTAATGGATACTGTAACTTCACCCGAACAGGACAAACTCTGGTCGCGGCCGAAGTaGTCACAGTGGAGACCCACC | + |
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Preference number: 4 (lower is better) Translates to: CEQTQVMDTVTSPEQDKLWSRPK*SQWRPT Trigger: GGTGGGTCTCCACTGTGAGCACTTCGGCCGCGACCA...GAGTTTGTCCTGTTCGGGTGAAGTTACAGTATCCATTACTTGTGTTTGCTCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373673.5 |
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| CDS-3UTR CCA 90 bp | GGAAAAGAAAGGCAATTAAATGATTGCGTCCATAGGTCTGATGATGCGAATAAAGCCGCCGGAGGCTTCTaGGCTACTTGGGGCAGGGCC | + |
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Preference number: 4 (lower is better) Translates to: GKERQLNDCVHRSDDANKAAGGF*ATWGRA Trigger: GGCCCTGCCCCAAGTAGCCCAGAAGCCTCCGGCGGC...TTTATTCGCATCATCAGACCTATGGACGCAATCATTTAATTGCCTTTCTTTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373673.5 |
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| CDS-3UTR GCA 90 bp | CTCGAGGATTGCATCCTTAGAATCCTGGGCCGCCGGAGGCTTCTGGGCTACTTGACAAAGCAACTCACGTaGAATCAAATAGTTTACAGT | + |
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Preference number: 4 (lower is better) Translates to: LEDCILRILGRRRLLGYLTKQLT*NQIVYS Trigger: ACTGTAAACTATTTGATTGCACGTGAGTTGCTTTGT...CAAGTAGCCCAGAAGCCTCCGGCGGCCCAGGATTCTAAGGATGCAATCCTCGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373673.5 |
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| CDS-3UTR CCA 90 bp | CAAACACAAGTAATGGATACTGTAACTTCACCCGAACAGGACAAACTCACAAAGCAGCAGAGTTTGGTGTaGCTGGTTCGAGGAAGGCCT | + |
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Preference number: 4 (lower is better) Translates to: QTQVMDTVTSPEQDKLTKQQSLV*LVRGRP Trigger: AGGCCTTCCTCGAACCAGCCACACCAAACTCTGCTG...CTTTGTGAGTTTGTCCTGTTCGGGTGAAGTTACAGTATCCATTACTTGTGTTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373673.5 |
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| CDS-3UTR TCA 90 bp | CACACACAATGCACTAAAGCAAAAACGCATTTACACAACAGGAAGGTAGCTCTGAAGGTAGCTCTGTTGTaGGCAAACACAAGTAATGGA | + |
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Preference number: 4 (lower is better) Translates to: HTQCTKAKTHLHNRKVALKVALL*ANTSNG Trigger: TCCATTACTTGTGTTTGCTCACAACAGAGCTACCTT...CAGAGCTACCTTCCTGTTGTGTAAATGCGTTTTTGCTTTAGTGCATTGTGTGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000373673.5 |
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| CDS-3UTR CCA 90 bp | GGAAAAGAAAGGCAATTAAATGATTGCGTCCATAGGTCTGATGATGCGAATAAATTCTGCAGCAGAGTTTaGTGTGGCTGGTTCGAGGAA | + |
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Preference number: 4 (lower is better) Translates to: GKERQLNDCVHRSDDANKFCSRV*CGWFEE Trigger: TTCCTCGAACCAGCCACACCAAACTCTGCTGCAGAA...TTTATTCGCATCATCAGACCTATGGACGCAATCATTTAATTGCCTTTCTTTTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373673.5 |
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| CDS-3UTR GCA 90 bp | TGTGAGCAAACACAAGTAATGGATACTGTAACTTCACCCGAACAGGACAAACTCTGCTTGCACACACAATaGACTAAAGCAAAAACGCAT | + |
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Preference number: 4 (lower is better) Translates to: CEQTQVMDTVTSPEQDKLCLHTQ*TKAKTH Trigger: ATGCGTTTTTGCTTTAGTGCATTGTGTGTGCAAGCA...GAGTTTGTCCTGTTCGGGTGAAGTTACAGTATCCATTACTTGTGTTTGCTCACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000373673.5 |
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| CDS-3UTR GCA 90 bp | TGTGAGCAAACACAAGTAATGGATACTGTAACTTCACCCGAACAGGACAAACTCAGGCAATTAAATGATTaGGTCCATAGGTCTGATGAT | + |
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Preference number: 4 (lower is better) Translates to: CEQTQVMDTVTSPEQDKLRQLND*VHRSDD Trigger: ATCATCAGACCTATGGACGCAATCATTTAATTGCCT...GAGTTTGTCCTGTTCGGGTGAAGTTACAGTATCCATTACTTGTGTTTGCTCACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373673.5 |
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| CDS GCA 90 bp | GGAGGCTTCTGGGCTACTTGGGGCAGGGCCGAGGCTCGGAGCGGCTaGCGGACACCCACCCCCGCGGAGGCGCGCGCCCTAGGTGGCCAT | + |
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Preference number: 5 (lower is better) Translates to: GGFWATWGRAEARSG*RTPTPAEARALGGH Trigger: ATGGCCACCTAGGGCGCGCGCCTCCGCGGGGGTGGGTGTCCGGCAGCCGCTCCGAGCCTCGGCCCTGCCCCAAGTAGCCCAGAAGCCTCC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373673.5 |
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| CDS GCA 90 bp | CCAAGCAGCGAGGCGCCGACCTCGCACGCCCGCCCGCTCAGGACCTaGGCGTGGGCTGGTCTCTCGAGCCGCTTCCCAACGTGCCTCTTC | + |
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Preference number: 5 (lower is better) Translates to: PSSEAPTSHARPLRT*AWAGLSSRFPTCLF Trigger: GAAGAGGCACGTTGGGAAGCGGCTCGAGAGACCAGCCCACGCGCAGGTCCTGAGCGGGCGGGCGTGCGAGGTCGGCGCCTCGCTGCTTGG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373673.5 |
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| CDS-3UTR CAA 90 bp | AGAATCCTGGGCCGCCGGAGGCTTCTGGGCTACTTGGGGCAGGGCCGAGGCTCGGGCGGGCCGCTGGGCTaGCAGGACTTCATCCCCGGC | + |
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Preference number: 5 (lower is better) Translates to: RILGRRRLLGYLGQGRGSGGPLG*QDFIPG Trigger: GCCGGGGATGAAGTCCTGCAAGCCCAGCGGCCCGCC...CGAGCCTCGGCCCTGCCCCAAGTAGCCCAGAAGCCTCCGGCGGCCCAGGATTCT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373673.5 |
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| CDS-3UTR CAA 90 bp | GGCTTCTGGGCTACTTGGGGCAGGGCCGAGGCTCGGAGCGGCTGCCGGACACCCCGGTCGAAGGCAGTGTaGAGCCCCTGCATGCGGCGG | + |
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Preference number: 5 (lower is better) Translates to: GFWATWGRAEARSGCRTPRSKAV*SPCMRR Trigger: CCGCCGCATGCAGGGGCTCAACACTGCCTTCGACCG...GGGTGTCCGGCAGCCGCTCCGAGCCTCGGCCCTGCCCCAAGTAGCCCAGAAGCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000373673.5 |
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| CDS-3UTR CAA 90 bp | AGAATCCTGGGCCGCCGGAGGCTTCTGGGCTACTTGGGGCAGGGCCGAGGCTCGCTTCTGCAGCAGAGTTaGGTGTGGCTGGTTCGAGGA | + |
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Preference number: 5 (lower is better) Translates to: RILGRRRLLGYLGQGRGSLLQQS*VWLVRG Trigger: TCCTCGAACCAGCCACACCAAACTCTGCTGCAGAAG...CGAGCCTCGGCCCTGCCCCAAGTAGCCCAGAAGCCTCCGGCGGCCCAGGATTCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373673.5 |
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| CDS-3UTR CAA 90 bp | GATTGCATCCTTAGAATCCTGGGCCGCCGGAGGCTTCTGGGCTACTTGGGGCAGAGGCTTCTGGGCTACTaGGGGCAGGGCCGAGGCTCG | + |
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Preference number: 5 (lower is better) Translates to: DCILRILGRRRLLGYLGQRLLGY*GQGRGS Trigger: CGAGCCTCGGCCCTGCCCCAAGTAGCCCAGAAGCCT...CTGCCCCAAGTAGCCCAGAAGCCTCCGGCGGCCCAGGATTCTAAGGATGCAATC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373673.5 |
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| CDS-3UTR CAA 90 bp | CTGGGCCGCCGGAGGCTTCTGGGCTACTTGGGGCAGGGCCGAGGCTCGGAGCGGGTTTCTACTTCATGCTaGCACACACAATGCACTAAA | + |
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Preference number: 5 (lower is better) Translates to: LGRRRLLGYLGQGRGSERVSTSC*HTQCTK Trigger: TTTAGTGCATTGTGTGTGCAAGCATGAAGTAGAAAC...CCGCTCCGAGCCTCGGCCCTGCCCCAAGTAGCCCAGAAGCCTCCGGCGGCCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373673.5 |
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| CDS GCA 90 bp | TCGAGGAAGGCCTTTCAAGTCCTCTGGGAAAGCCTGAGACTCCTTTaGAGGAAGATGAACTCTTTCCCGAAGCTCAGGGAAGGAGCGCTT | + |
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Preference number: 5 (lower is better) Translates to: SRKAFQVLWESLRLL*RKMNSFPKLREGAL Trigger: AAGCGCTCCTTCCCTGAGCTTCGGGAAAGAGTTCATCTTCCTGCAAAGGAGTCTCAGGCTTTCCCAGAGGACTTGAAAGGCCTTCCTCGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373673.5 |
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| CDS CCA 90 bp | GCAGAGTTTGGTGTGGCTGGTTCGAGGAAGGCCTTTCAAGTCCTCTaGGAAAGCCTGAGACTCCTTTGCAGGAAGATGAACTCTTTCCCG | + |
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Preference number: 5 (lower is better) Translates to: AEFGVAGSRKAFQVL*ESLRLLCRKMNSFP Trigger: CGGGAAAGAGTTCATCTTCCTGCAAAGGAGTCTCAGGCTTTCCCAGAGGACTTGAAAGGCCTTCCTCGAACCAGCCACACCAAACTCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373673.5 |
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| CDS CCA 90 bp | AATAGTTTACAGTGGGGGAGTGCGGGACTCGGCCTTCTGTTCTACTaGATGACCAGGCTGATATCTCTTCACTTGCCCAAATTTAGGGGA | + |
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Preference number: 5 (lower is better) Translates to: NSLQWGSAGLGLLFY*MTRLISLHLPKFRG Trigger: TCCCCTAAATTTGGGCAAGTGAAGAGATATCAGCCTGGTCATCCAGTAGAACAGAAGGCCGAGTCCCGCACTCCCCCACTGTAAACTATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373673.5 |
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| CDS-3UTR CAA 90 bp | TGTGAGCAAACACAAGTAATGGATACTGTAACTTCACCCGAACAGGACAAACTCAAGCCTGAGACTCCTTaGCAGGAAGATGAACTCTTT | + |
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Preference number: 5 (lower is better) Translates to: CEQTQVMDTVTSPEQDKLKPETP*QEDELF Trigger: AAAGAGTTCATCTTCCTGCAAAGGAGTCTCAGGCTT...GAGTTTGTCCTGTTCGGGTGAAGTTACAGTATCCATTACTTGTGTTTGCTCACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373673.5 |
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| CDS-3UTR CAA 90 bp | CAAACACAAGTAATGGATACTGTAACTTCACCCGAACAGGACAAACTCACAAAGCTGATATCTCTTCACTaGCCCAAATTTAGGGGAAAA | + |
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Preference number: 5 (lower is better) Translates to: QTQVMDTVTSPEQDKLTKLISLH*PKFRGK Trigger: TTTTCCCCTAAATTTGGGCAAGTGAAGAGATATCAG...CTTTGTGAGTTTGTCCTGTTCGGGTGAAGTTACAGTATCCATTACTTGTGTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373673.5 |
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| CDS CAA 90 bp | TCGAAGGCAGTGTTGAGCCCCTGCATGCGGCGGCGCTCGCGCGCGTaGGCCGCCAGGCGCCTGCGCGCCGCGCTCTCCAGCCGCCCGGCC | + |
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Preference number: 6 (lower is better) Translates to: SKAVLSPCMRRRSRA*AARRLRAALSSRPA Trigger: GGCCGGGCGGCTGGAGAGCGCGGCGCGCAGGCGCCTGGCGGCCAACGCGCGCGAGCGCCGCCGCATGCAGGGGCTCAACACTGCCTTCGA 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373673.5 |
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| CDS CAA 72 bp | GTGTTGAGCCCCTGCATGCGGCGGCGCTCGCGCGCGTaGGCCGCCAGGCGCCTGCGCGCCGCGCTCTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: VLSPCMRRRSRA*AARRLRAALSS Trigger: GCTGGAGAGCGCGGCGCGCAGGCGCCTGGCGGCCAACGCGCGCGAGCGCCGCCGCATGCAGGGGCTCAACAC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373673.5 |
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| CDS GCA 72 bp | TGGGCTACTTGGGGCAGGGCCGAGGCTCGGAGCGGCTaGCGGACACCCACCCCCGCGGAGGCGCGCGCCCTA | + |
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Preference number: 6 (lower is better) Translates to: WATWGRAEARSG*RTPTPAEARAL Trigger: TAGGGCGCGCGCCTCCGCGGGGGTGGGTGTCCGGCAGCCGCTCCGAGCCTCGGCCCTGCCCCAAGTAGCCCA 78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373673.5 |
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| CDS GCA 72 bp | GTGCAACGCGCGCTCCCGCCGGCGGGCCGCTGGGCTTaGAGGACTTCATCCCCGGCCCCAAGCAGCGAGGCG | + |
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Preference number: 6 (lower is better) Translates to: VQRALPPAGRWA*RTSSPAPSSEA Trigger: CGCCTCGCTGCTTGGGGCCGGGGATGAAGTCCTGCAAGCCCAGCGGCCCGCCGGCGGGAGCGCGCGTTGCAC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373673.5 |
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| CDS CAA 72 bp | GGTGCAACGCGCGCTCCCGCCGGCGGGCCGCTGGGCTaGCAGGACTTCATCCCCGGCCCCAAGCAGCGAGGC | + |
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Preference number: 6 (lower is better) Translates to: GATRAPAGGPLG*QDFIPGPKQRG Trigger: GCCTCGCTGCTTGGGGCCGGGGATGAAGTCCTGCAAGCCCAGCGGCCCGCCGGCGGGAGCGCGCGTTGCACC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373673.5 |
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| CDS GCA 72 bp | GAGGCGCCGACCTCGCACGCCCGCCCGCTCAGGACCTaGGCGTGGGCTGGTCTCTCGAGCCGCTTCCCAACG | + |
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Preference number: 6 (lower is better) Translates to: EAPTSHARPLRT*AWAGLSSRFPT Trigger: CGTTGGGAAGCGGCTCGAGAGACCAGCCCACGCGCAGGTCCTGAGCGGGCGGGCGTGCGAGGTCGGCGCCTC 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373673.5 |
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| CDS CCA 72 bp | CCGACCTCGCACGCCCGCCCGCTCAGGACCTGCGCGTaGGCTGGTCTCTCGAGCCGCTTCCCAACGTGCCTC | + |
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Preference number: 6 (lower is better) Translates to: PTSHARPLRTCA*AGLSSRFPTCL Trigger: GAGGCACGTTGGGAAGCGGCTCGAGAGACCAGCCCACGCGCAGGTCCTGAGCGGGCGGGCGTGCGAGGTCGG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373673.5 |
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| CDS CCA 72 bp | CCGGACACCCACCCCCGCGGAGGCGCGCGCCCTAGGTaGCCATCTGGAAGGGCTCGGGCTGGAAGCCGAAGA | + |
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Preference number: 6 (lower is better) Translates to: PDTHPRGGARPR*PSGRARAGSRR Trigger: TCTTCGGCTTCCAGCCCGAGCCCTTCCAGATGGCCACCTAGGGCGCGCGCCTCCGCGGGGGTGGGTGTCCGG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000373673.5 |
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| CDS TCA 72 bp | GGGGAACCACCCTGCGTAAGCGGTCGAAGGCAGTGTTaGGCCCCTGCATGCGGCGGCGCTCGCGCGCGTTGG | + |
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Preference number: 6 (lower is better) Translates to: GEPPCVSGRRQC*APACGGARARW Trigger: CCAACGCGCGCGAGCGCCGCCGCATGCAGGGGCTCAACACTGCCTTCGACCGCTTACGCAGGGTGGTTCCCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373673.5 |
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| CDS CCA 72 bp | CTCGCACGCCCGCCCGCTCAGGACCTGCGCGTGGGCTaGTCTCTCGAGCCGCTTCCCAACGTGCCTCTTCTG | + |
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Preference number: 6 (lower is better) Translates to: LARPPAQDLRVG*SLEPLPNVPLL Trigger: CAGAAGAGGCACGTTGGGAAGCGGCTCGAGAGACCAGCCCACGCGCAGGTCCTGAGCGGGCGGGCGTGCGAG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373673.5 |
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| CDS CAA 72 bp | TGGGGAACCACCCTGCGTAAGCGGTCGAAGGCAGTGTaGAGCCCCTGCATGCGGCGGCGCTCGCGCGCGTTG | + |
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Preference number: 6 (lower is better) Translates to: WGTTLRKRSKAV*SPCMRRRSRAL Trigger: CAACGCGCGCGAGCGCCGCCGCATGCAGGGGCTCAACACTGCCTTCGACCGCTTACGCAGGGTGGTTCCCCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373673.5 |
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| CDS CCA 72 bp | GTCTCGTACTTGGACAGCTTTTTATCCTGGCCCCACTaGGGAACCACCCTGCGTAAGCGGTCGAAGGCAGTG | + |
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Preference number: 6 (lower is better) Translates to: VSYLDSFLSWPH*GTTLRKRSKAV Trigger: CACTGCCTTCGACCGCTTACGCAGGGTGGTTCCCCAGTGGGGCCAGGATAAAAAGCTGTCCAAGTACGAGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373673.5 |
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| CDS CCA 72 bp | CAGTGGGGGAGTGCGGGACTCGGCCTTCTGTTCTACTaGATGACCAGGCTGATATCTCTTCACTTGCCCAAA | + |
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Preference number: 6 (lower is better) Translates to: QWGSAGLGLLFY*MTRLISLHLPK Trigger: TTTGGGCAAGTGAAGAGATATCAGCCTGGTCATCCAGTAGAACAGAAGGCCGAGTCCCGCACTCCCCCACTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000373673.5 |
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| CDS CCA 72 bp | GGTGTGGCTGGTTCGAGGAAGGCCTTTCAAGTCCTCTaGGAAAGCCTGAGACTCCTTTGCAGGAAGATGAAC | + |
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Preference number: 6 (lower is better) Translates to: GVAGSRKAFQVL*ESLRLLCRKMN Trigger: GTTCATCTTCCTGCAAAGGAGTCTCAGGCTTTCCCAGAGGACTTGAAAGGCCTTCCTCGAACCAGCCACACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373673.5 |
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| CDS CAA 90 bp | TTCGAGGAAGGCCTTTCAAGTCCTCTGGGAAAGCCTGAGACTCCTTaGCAGGAAGATGAACTCTTTCCCGAAGCTCAGGGAAGGAGCGCT | + |
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Preference number: 6 (lower is better) Translates to: FEEGLSSPLGKPETP*QEDELFPEAQGRSA Trigger: AGCGCTCCTTCCCTGAGCTTCGGGAAAGAGTTCATCTTCCTGCAAAGGAGTCTCAGGCTTTCCCAGAGGACTTGAAAGGCCTTCCTCGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373673.5 |
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| CDS CAA 72 bp | GGCCTTTCAAGTCCTCTGGGAAAGCCTGAGACTCCTTaGCAGGAAGATGAACTCTTTCCCGAAGCTCAGGGA | + |
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Preference number: 6 (lower is better) Translates to: GLSSPLGKPETP*QEDELFPEAQG Trigger: TCCCTGAGCTTCGGGAAAGAGTTCATCTTCCTGCAAAGGAGTCTCAGGCTTTCCCAGAGGACTTGAAAGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373673.5 |
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| CDS GCA 72 bp | GCCTTTCAAGTCCTCTGGGAAAGCCTGAGACTCCTTTaGAGGAAGATGAACTCTTTCCCGAAGCTCAGGGAA | + |
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Preference number: 6 (lower is better) Translates to: AFQVLWESLRLL*RKMNSFPKLRE Trigger: TTCCCTGAGCTTCGGGAAAGAGTTCATCTTCCTGCAAAGGAGTCTCAGGCTTTCCCAGAGGACTTGAAAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373673.5 |
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| CDS CCA 72 bp | AAAAGAGAAGGAAACCTTCTGCAGCAGAGTTTGGTGTaGCTGGTTCGAGGAAGGCCTTTCAAGTCCTCTGGG | + |
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Preference number: 6 (lower is better) Translates to: KREGNLLQQSLV*LVRGRPFKSSG Trigger: CCCAGAGGACTTGAAAGGCCTTCCTCGAACCAGCCACACCAAACTCTGCTGCAGAAGGTTTCCTTCTCTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373673.5 |
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| CDS CCA 72 bp | AACAAAGCAACTCACGTGCAATCAAATAGTTTACAGTaGGGGAGTGCGGGACTCGGCCTTCTGTTCTACTGG | + |
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Preference number: 6 (lower is better) Translates to: NKATHVQSNSLQ*GSAGLGLLFYW Trigger: CCAGTAGAACAGAAGGCCGAGTCCCGCACTCCCCCACTGTAAACTATTTGATTGCACGTGAGTTGCTTTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373673.5 |
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| CDS CCA 72 bp | GTTGAAAAAGAGAAGGAAACCTTCTGCAGCAGAGTTTaGTGTGGCTGGTTCGAGGAAGGCCTTTCAAGTCCT | + |
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Preference number: 6 (lower is better) Translates to: VEKEKETFCSRV*CGWFEEGLSSP Trigger: AGGACTTGAAAGGCCTTCCTCGAACCAGCCACACCAAACTCTGCTGCAGAAGGTTTCCTTCTCTTTTTCAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000373673.5 |
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