RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ATN1 (Homo sapiens)

Ensembl gene IDs: ENSG00000111676

Ensembl transcript IDs: ENST00000356654.8, ENST00000396684.3, ENST00000537488.1, ENST00000541029.1

Found 329 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR TCA 90 bp ATCCTCGCCACCTCCCCACCTCTGCACACCACATCGGGCCTTGGCCTTCTGTCTCGGAGGCCCTGCAACTaGGCAGCACCCTCTTGGCTC +
Preference number: 2 (lower is better)
Translates to: ILATSPPLHTTSGLGLLSRRPCN*AAPSWL
Trigger: GAGCCAAGAGGGTGCTGCTCAGTTGCAGGGCCTCCG...AGACAGAAGGCCAAGGCCCGATGTGGTGTGCAGAGGTGGGGAGGTGGCGAGGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
3UTR-3UTR CCA 90 bp ATCCTCGCCACCTCCCCACCTCTGCACACCACATCGGGCCTTGGCCTTCTGTCTGCACCCTCTTGGCTCTaGGTGGCAGGCCAAGGGCAC +
Preference number: 2 (lower is better)
Translates to: ILATSPPLHTTSGLGLLSAPSWL*VAGQGH
Trigger: GTGCCCTTGGCCTGCCACCCAGAGCCAAGAGGGTGC...AGACAGAAGGCCAAGGCCCGATGTGGTGTGCAGAGGTGGGGAGGTGGCGAGGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
3UTR-3UTR GCA 90 bp ACTCTCTGTCCAGCTGCGGAGGCCCTGCAACTGAGCAGCACCCTCTTGGCTCTGGGGGGAGGGTGGGGGTaGTCCAAGGTCCAATGTAGG +
Preference number: 2 (lower is better)
Translates to: TLCPAAEALQLSSTLLALGGGWG*SKVQCR
Trigger: CCTACATTGGACCTTGGAGCACCCCCACCCTCCCCC...CAGAGCCAAGAGGGTGCTGCTCAGTTGCAGGGCCTCCGCAGCTGGACAGAGAGT
63% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
3UTR-3UTR GCA 90 bp GACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCACCTCCCCACGGGGGAGGGTGGGGGTaGTCCAAGGTCCAATGTAGG +
Preference number: 2 (lower is better)
Translates to: DLVQDSVRFLSPSSPPPHGGGWG*SKVQCR
Trigger: CCTACATTGGACCTTGGAGCACCCCCACCCTCCCCC...GTGGGGAGGTGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
3UTR-3UTR TCA 90 bp GGACAAGGAAGAGAGACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGGAGGCCCTGCAACTaGGCAGCACCCTCTTGGCTC +
Preference number: 2 (lower is better)
Translates to: GQGRETWSKILCAFCPHPRRPCN*AAPSWL
Trigger: GAGCCAAGAGGGTGCTGCTCAGTTGCAGGGCCTCCG...AGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTCTCTCTTCCTTGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
3UTR-3UTR GCA 90 bp AGGAAGAGAGACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCACACTCTCTGTCCAGCTaGGGAGGCCCTGCAACTGAG +
Preference number: 2 (lower is better)
Translates to: RKRDLVQDSVRFLSPSSPHSLSS*GGPATE
Trigger: CTCAGTTGCAGGGCCTCCGCAGCTGGACAGAGAGTG...TGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTCTCTCTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
3UTR-3UTR CCA 90 bp AGGAAGAGAGACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCACACCACATCGGGCCTTaGCCTTCTGTCTGTCCCTCC +
Preference number: 2 (lower is better)
Translates to: RKRDLVQDSVRFLSPSSPHHIGP*PSVCPS
Trigger: GGAGGGACAGACAGAAGGCCAAGGCCCGATGTGGTG...TGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTCTCTCTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
3UTR-3UTR CAA 90 bp CCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCACCTCCCCACCTACACCACATCGGGCCTaGGCCTTCTGTCTGTCCCTC +
Preference number: 3 (lower is better)
Translates to: PGPRFCALSVPILATSPPTPHRA*AFCLSL
Trigger: GAGGGACAGACAGAAGGCCAAGGCCCGATGTGGTGT...AGGTGGGGAGGTGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR TCA 90 bp ACTCTCTGTCCAGCTGCGGAGGCCCTGCAACTGAGCAGCACCCTCTTGGCTCTGCACTGCTGGACGTGCTaGCCCCTCCAGGGGAGGCCC +
Preference number: 4 (lower is better)
Translates to: TLCPAAEALQLSSTLLALHCWTC*PLQGRP
Trigger: GGGCCTCCCCTGGAGGGGTCAGCACGTCCAGCAGTG...CAGAGCCAAGAGGGTGCTGCTCAGTTGCAGGGCCTCCGCAGCTGGACAGAGAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CCA 90 bp ACTCTCTGTCCAGCTGCGGAGGCCCTGCAACTGAGCAGCACCCTCTTGGCTCTGGGGTGGGCGGTGGACTaGGCCCCAGTAGAGGGAGGG +
Preference number: 4 (lower is better)
Translates to: TLCPAAEALQLSSTLLALGWAVD*APVEGG
Trigger: CCCTCCCTCTACTGGGGCCCAGTCCACCGCCCACCC...CAGAGCCAAGAGGGTGCTGCTCAGTTGCAGGGCCTCCGCAGCTGGACAGAGAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CCA 90 bp ATCCTCGCCACCTCCCCACCTCTGCACACCACATCGGGCCTTGGCCTTCTGTCTGGGCGGGCTGGGCCCTaGGACAGGCCAGAAGATGAG +
Preference number: 4 (lower is better)
Translates to: ILATSPPLHTTSGLGLLSGRAGP*DRPEDE
Trigger: CTCATCTTCTGGCCTGTCCCAGGGCCCAGCCCGCCC...AGACAGAAGGCCAAGGCCCGATGTGGTGTGCAGAGGTGGGGAGGTGGCGAGGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CCA 90 bp ACTCTCTGTCCAGCTGCGGAGGCCCTGCAACTGAGCAGCACCCTCTTGGCTCTGTGGGGGCAGGTGTGCTaGCCCTGGTGGGTAGGGCCT +
Preference number: 4 (lower is better)
Translates to: TLCPAAEALQLSSTLLALWGQVC*PWWVGP
Trigger: AGGCCCTACCCACCAGGGCCAGCACACCTGCCCCCA...CAGAGCCAAGAGGGTGCTGCTCAGTTGCAGGGCCTCCGCAGCTGGACAGAGAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CCA 90 bp CCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCACCTCCCCACCTAGGGGCCGCAGGTGGTaGTGGCAGCGATGGCAGGCC +
Preference number: 4 (lower is better)
Translates to: PGPRFCALSVPILATSPPRGRRW*WQRWQA
Trigger: GGCCTGCCATCGCTGCCACCACCACCTGCGGCCCCT...AGGTGGGGAGGTGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CCA 90 bp CCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCACCTCCCCACCTGGCAGGGGCCGCAGGTaGTGGTGGCAGCGATGGCAG +
Preference number: 4 (lower is better)
Translates to: PGPRFCALSVPILATSPPGRGRR*WWQRWQ
Trigger: CTGCCATCGCTGCCACCACCACCTGCGGCCCCTGCC...AGGTGGGGAGGTGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR TCA 90 bp ACTCTCTGTCCAGCTGCGGAGGCCCTGCAACTGAGCAGCACCCTCTTGGCTCTGCAGCCGGCTCCTGTTTaGTCTGCGTGGCGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: TLCPAAEALQLSSTLLALQPAPV*SAWRSG
Trigger: CCCTGAGCGCCACGCAGATCAAACAGGAGCCGGCTG...CAGAGCCAAGAGGGTGCTGCTCAGTTGCAGGGCCTCCGCAGCTGGACAGAGAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR TCA 90 bp ATCCTCGCCACCTCCCCACCTCTGCACACCACATCGGGCCTTGGCCTTCTGTCTCAGCCGGCTCCTGTTTaGTCTGCGTGGCGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: ILATSPPLHTTSGLGLLSQPAPV*SAWRSG
Trigger: CCCTGAGCGCCACGCAGATCAAACAGGAGCCGGCTG...AGACAGAAGGCCAAGGCCCGATGTGGTGTGCAGAGGTGGGGAGGTGGCGAGGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR TCA 90 bp ACTCTCTGTCCAGCTGCGGAGGCCCTGCAACTGAGCAGCACCCTCTTGGCTCTGGGCCCCAGGCTCGGATaGAAGGGGAAAGGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: TLCPAAEALQLSSTLLALGPRLG*KGKGCR
Trigger: CCTGCACCCTTTCCCCTTTCATCCGAGCCTGGGGCC...CAGAGCCAAGAGGGTGCTGCTCAGTTGCAGGGCCTCCGCAGCTGGACAGAGAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR TCA 90 bp CCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCACCTCCCCACCTGGGATCCGGGTAAGGTaGGACCCTGAGGCCAGGGGG +
Preference number: 4 (lower is better)
Translates to: PGPRFCALSVPILATSPPGIRVR*DPEARG
Trigger: CCCCCTGGCCTCAGGGTCTCACCTTACCCGGATCCC...AGGTGGGGAGGTGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR TCA 90 bp ACTCTCTGTCCAGCTGCGGAGGCCCTGCAACTGAGCAGCACCCTCTTGGCTCTGGCGCTGCAGCTCAGCTaGCTGTGCGTGCATGGCCTG +
Preference number: 4 (lower is better)
Translates to: TLCPAAEALQLSSTLLALALQLS*LCVHGL
Trigger: CAGGCCATGCACGCACAGTCAGCTGAGCTGCAGCGC...CAGAGCCAAGAGGGTGCTGCTCAGTTGCAGGGCCTCCGCAGCTGGACAGAGAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR GCA 90 bp ATCCTCGCCACCTCCCCACCTCTGCACACCACATCGGGCCTTGGCCTTCTGTCTCTGGCTGTCGAGGGGTaGTGTCTGGCGGTTGAGGGG +
Preference number: 4 (lower is better)
Translates to: ILATSPPLHTTSGLGLLSLAVEG*CLAVEG
Trigger: CCCCTCAACCGCCAGACAGCACCCCTCGACAGCCAG...AGACAGAAGGCCAAGGCCCGATGTGGTGTGCAGAGGTGGGGAGGTGGCGAGGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR GCA 90 bp ACTCTCTGTCCAGCTGCGGAGGCCCTGCAACTGAGCAGCACCCTCTTGGCTCTGGAAGGTCCCTGGGCCTaGAGGTGGCGAGGTTCCTCG +
Preference number: 4 (lower is better)
Translates to: TLCPAAEALQLSSTLLALEGPWA*RWRGSS
Trigger: CGAGGAACCTCGCCACCTGCAGGCCCAGGGACCTTC...CAGAGCCAAGAGGGTGCTGCTCAGTTGCAGGGCCTCCGCAGCTGGACAGAGAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR GCA 90 bp ATCCTCGCCACCTCCCCACCTCTGCACACCACATCGGGCCTTGGCCTTCTGTCTGGCCGCCACCCTTTCTaGGTGCTGCCTCTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: ILATSPPLHTTSGLGLLSGRHPF*VLPLSC
Trigger: GCAGCTGAGAGGCAGCACGCAGAAAGGGTGGCGGCC...AGACAGAAGGCCAAGGCCCGATGTGGTGTGCAGAGGTGGGGAGGTGGCGAGGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CCA 90 bp ATCCTCGCCACCTCCCCACCTCTGCACACCACATCGGGCCTTGGCCTTCTGTCTGCCATAGGGAGGAGGTaGTGGGGGACCCTGGCTCCA +
Preference number: 4 (lower is better)
Translates to: ILATSPPLHTTSGLGLLSAIGRR*WGTLAP
Trigger: TGGAGCCAGGGTCCCCCACCACCTCCTCCCTATGGC...AGACAGAAGGCCAAGGCCCGATGTGGTGTGCAGAGGTGGGGAGGTGGCGAGGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CCA 90 bp ACTCTCTGTCCAGCTGCGGAGGCCCTGCAACTGAGCAGCACCCTCTTGGCTCTGGCCATAGGGAGGAGGTaGTGGGGGACCCTGGCTCCA +
Preference number: 4 (lower is better)
Translates to: TLCPAAEALQLSSTLLALAIGRR*WGTLAP
Trigger: TGGAGCCAGGGTCCCCCACCACCTCCTCCCTATGGC...CAGAGCCAAGAGGGTGCTGCTCAGTTGCAGGGCCTCCGCAGCTGGACAGAGAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CCA 90 bp ACTCTCTGTCCAGCTGCGGAGGCCCTGCAACTGAGCAGCACCCTCTTGGCTCTGGTTGAGACTGGTGGGTaGGCGGTGGACTGGGCCCCA +
Preference number: 4 (lower is better)
Translates to: TLCPAAEALQLSSTLLALVETGG*AVDWAP
Trigger: TGGGGCCCAGTCCACCGCCCACCCACCAGTCTCAAC...CAGAGCCAAGAGGGTGCTGCTCAGTTGCAGGGCCTCCGCAGCTGGACAGAGAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CCA 90 bp GACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCACCTCCCCACCGGTGGGGGCCCAGGTaGGGAGGCCGTTTTGTAGCC +
Preference number: 4 (lower is better)
Translates to: DLVQDSVRFLSPSSPPPHRWGPR*GGRFVA
Trigger: GGCTACAAAACGGCCTCCCCACCTGGGCCCCCACCG...GTGGGGAGGTGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CCA 90 bp ATCCTCGCCACCTCCCCACCTCTGCACACCACATCGGGCCTTGGCCTTCTGTCTTCTCTTTCCGTACGGTaGGGGCCCAGGTGGGGAGGC +
Preference number: 4 (lower is better)
Translates to: ILATSPPLHTTSGLGLLSSLSVR*GPRWGG
Trigger: GCCTCCCCACCTGGGCCCCCACCGTACGGAAAGAGA...AGACAGAAGGCCAAGGCCCGATGTGGTGTGCAGAGGTGGGGAGGTGGCGAGGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CCA 90 bp ATCCTCGCCACCTCCCCACCTCTGCACACCACATCGGGCCTTGGCCTTCTGTCTCGGCTTGAAGGTCCCTaGGCCTGCAGGTGGCGAGGT +
Preference number: 4 (lower is better)
Translates to: ILATSPPLHTTSGLGLLSRLEGP*ACRWRG
Trigger: ACCTCGCCACCTGCAGGCCCAGGGACCTTCAAGCCG...AGACAGAAGGCCAAGGCCCGATGTGGTGTGCAGAGGTGGGGAGGTGGCGAGGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR TCA 90 bp ATCCTCGCCACCTCCCCACCTCTGCACACCACATCGGGCCTTGGCCTTCTGTCTCGCAGGGGACAGCCTTaGAGTTCCTCCCACTTGGCG +
Preference number: 4 (lower is better)
Translates to: ILATSPPLHTTSGLGLLSRRGQP*SSSHLA
Trigger: CGCCAAGTGGGAGGAACTTCAAGGCTGTCCCCTGCG...AGACAGAAGGCCAAGGCCCGATGTGGTGTGCAGAGGTGGGGAGGTGGCGAGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356654.8
CDS-3UTR TCA 90 bp AAGGAAGAGAGACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCCAGCGATGGCAGGCCTaGGGGCCCCGCAGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: KEERPGPRFCALSVPILAQRWQA*GPRRWQ
Trigger: CTGCCACCTGCGGGGCCCTCAGGCCTGCCATCGCTG...GGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTCTCTCTTCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR TCA 90 bp AGGAAGAGAGACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCACAGCGATGGCAGGCCTaGGGGCCCCGCAGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: RKRDLVQDSVRFLSPSSPQRWQA*GPRRWQ
Trigger: CTGCCACCTGCGGGGCCCTCAGGCCTGCCATCGCTG...TGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTCTCTCTTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR TCA 90 bp ATCCTCGCCACCTCCCCACCTCTGCACACCACATCGGGCCTTGGCCTTCTGTCTTGCGCGCGCACGAGTTaGAGCCGCGATCCAGGTGTT +
Preference number: 4 (lower is better)
Translates to: ILATSPPLHTTSGLGLLSCARTS*SRDPGV
Trigger: AACACCTGGATCGCGGCTTCAACTCGTGCGCGCGCA...AGACAGAAGGCCAAGGCCCGATGTGGTGTGCAGAGGTGGGGAGGTGGCGAGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR TCA 90 bp GACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCACCTCCCCACGCGCTGCAGCTCAGCTaGCTGTGCGTGCATGGCCTG +
Preference number: 4 (lower is better)
Translates to: DLVQDSVRFLSPSSPPPHALQLS*LCVHGL
Trigger: CAGGCCATGCACGCACAGTCAGCTGAGCTGCAGCGC...GTGGGGAGGTGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR TCA 90 bp GACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCACCTCCCCACCGGAGGCCCTGCAACTaGGCAGCACCCTCTTGGCTC +
Preference number: 4 (lower is better)
Translates to: DLVQDSVRFLSPSSPPPHRRPCN*AAPSWL
Trigger: GAGCCAAGAGGGTGCTGCTCAGTTGCAGGGCCTCCG...GTGGGGAGGTGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR TCA 90 bp CCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCACCTCCCCACCTCGGAGGCCCTGCAACTaGGCAGCACCCTCTTGGCTC +
Preference number: 4 (lower is better)
Translates to: PGPRFCALSVPILATSPPRRPCN*AAPSWL
Trigger: GAGCCAAGAGGGTGCTGCTCAGTTGCAGGGCCTCCG...AGGTGGGGAGGTGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR GCA 90 bp GACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCACCTCCCCACCTGGCTGTCGAGGGGTaGTGTCTGGCGGTTGAGGGG +
Preference number: 4 (lower is better)
Translates to: DLVQDSVRFLSPSSPPPHLAVEG*CLAVEG
Trigger: CCCCTCAACCGCCAGACAGCACCCCTCGACAGCCAG...GTGGGGAGGTGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR GCA 90 bp ACTCTCTGTCCAGCTGCGGAGGCCCTGCAACTGAGCAGCACCCTCTTGGCTCTGCATGGCGTAAGGGTGTaGGTGGTGGGAGCTACCGCC +
Preference number: 4 (lower is better)
Translates to: TLCPAAEALQLSSTLLALHGVRV*VVGATA
Trigger: GGCGGTAGCTCCCACCACGCACACCCTTACGCCATG...CAGAGCCAAGAGGGTGCTGCTCAGTTGCAGGGCCTCCGCAGCTGGACAGAGAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR GCA 90 bp CCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCACCTCCCCACCTGGCCGCCACCCTTTCTaGGTGCTGCCTCTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: PGPRFCALSVPILATSPPGRHPF*VLPLSC
Trigger: GCAGCTGAGAGGCAGCACGCAGAAAGGGTGGCGGCC...AGGTGGGGAGGTGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR GCA 90 bp ACTCTCTGTCCAGCTGCGGAGGCCCTGCAACTGAGCAGCACCCTCTTGGCTCTGTCCAGCGCCAAGCGCTaGAGCTCAGCTGACTGTGCG +
Preference number: 4 (lower is better)
Translates to: TLCPAAEALQLSSTLLALSSAKR*SSADCA
Trigger: CGCACAGTCAGCTGAGCTGCAGCGCTTGGCGCTGGA...CAGAGCCAAGAGGGTGCTGCTCAGTTGCAGGGCCTCCGCAGCTGGACAGAGAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR GCA 90 bp ATCCTCGCCACCTCCCCACCTCTGCACACCACATCGGGCCTTGGCCTTCTGTCTGGGGGAGGGTGGGGGTaGTCCAAGGTCCAATGTAGG +
Preference number: 4 (lower is better)
Translates to: ILATSPPLHTTSGLGLLSGGGWG*SKVQCR
Trigger: CCTACATTGGACCTTGGAGCACCCCCACCCTCCCCC...AGACAGAAGGCCAAGGCCCGATGTGGTGTGCAGAGGTGGGGAGGTGGCGAGGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CCA 90 bp CCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCACCTCCCCACCTGGGTCTCAGGGCAGGTaGGGGAGGCAGGTTCGGTGT +
Preference number: 4 (lower is better)
Translates to: PGPRFCALSVPILATSPPGSQGR*GRQVRC
Trigger: ACACCGAACCTGCCTCCCCCACCTGCCCTGAGACCC...AGGTGGGGAGGTGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CCA 90 bp GACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCACCTCCCCACGGGTCTCAGGGCAGGTaGGGGAGGCAGGTTCGGTGT +
Preference number: 4 (lower is better)
Translates to: DLVQDSVRFLSPSSPPPHGSQGR*GRQVRC
Trigger: ACACCGAACCTGCCTCCCCCACCTGCCCTGAGACCC...GTGGGGAGGTGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CCA 90 bp ACTCTCTGTCCAGCTGCGGAGGCCCTGCAACTGAGCAGCACCCTCTTGGCTCTGGGGAGGGAAGGGGCCTaGATGGGCATTGCTGTTGGC +
Preference number: 4 (lower is better)
Translates to: TLCPAAEALQLSSTLLALGREGA*MGIAVG
Trigger: GCCAACAGCAATGCCCATCCAGGCCCCTTCCCTCCC...CAGAGCCAAGAGGGTGCTGCTCAGTTGCAGGGCCTCCGCAGCTGGACAGAGAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CCA 90 bp CCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCACCTCCCCACCTGTGTGCTGGCCCTGGTaGGTAGGGCCTCAGAGACCC +
Preference number: 4 (lower is better)
Translates to: PGPRFCALSVPILATSPPVCWPW*VGPQRP
Trigger: GGGTCTCTGAGGCCCTACCCACCAGGGCCAGCACAC...AGGTGGGGAGGTGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CCA 90 bp GACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCACCTCCCCACTCTCTTTCCGTACGGTaGGGGCCCAGGTGGGGAGGC +
Preference number: 4 (lower is better)
Translates to: DLVQDSVRFLSPSSPPPHSLSVR*GPRWGG
Trigger: GCCTCCCCACCTGGGCCCCCACCGTACGGAAAGAGA...GTGGGGAGGTGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CCA 90 bp ACTCTCTGTCCAGCTGCGGAGGCCCTGCAACTGAGCAGCACCCTCTTGGCTCTGTCCTCGATAGCCCGGTaGGGTCCCCGTTCGGAAGGA +
Preference number: 4 (lower is better)
Translates to: TLCPAAEALQLSSTLLALSSIAR*GPRSEG
Trigger: TCCTTCCGAACGGGGACCCCACCGGGCTATCGAGGA...CAGAGCCAAGAGGGTGCTGCTCAGTTGCAGGGCCTCCGCAGCTGGACAGAGAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CCA 90 bp GACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCACCTCCCCACCCCTGGGCCTGCAGGTaGCGAGGTTCCTCGATAGCC +
Preference number: 4 (lower is better)
Translates to: DLVQDSVRFLSPSSPPPHPWACR*RGSSIA
Trigger: GGCTATCGAGGAACCTCGCCACCTGCAGGCCCAGGG...GTGGGGAGGTGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CCA 90 bp GACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCACCTCCCCACCGGCTTGAAGGTCCCTaGGCCTGCAGGTGGCGAGGT +
Preference number: 4 (lower is better)
Translates to: DLVQDSVRFLSPSSPPPHRLEGP*ACRWRG
Trigger: ACCTCGCCACCTGCAGGCCCAGGGACCTTCAAGCCG...GTGGGGAGGTGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CCA 90 bp GACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCACCTCCCCACGGTCGGCCCGCTTCTTaGCCAGCTTGGAGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: DLVQDSVRFLSPSSPPPHGRPAS*PAWSPP
Trigger: TGGAGGGCTCCAAGCTGGCCAAGAAGCGGGCCGACC...GTGGGGAGGTGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CCA 90 bp GACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCACCTCCCCACGTAGCTCGGGACGGCTaGCTGGCTCCGAGCGGGATT +
Preference number: 4 (lower is better)
Translates to: DLVQDSVRFLSPSSPPPHVARDG*LAPSGI
Trigger: AATCCCGCTCGGAGCCAGCCAGCCGTCCCGAGCTAC...GTGGGGAGGTGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396684.3
CDS-3UTR TCA 90 bp ACTCTCTGTCCAGCTGCGGAGGCCCTGCAACTGAGCAGCACCCTCTTGGCTCTGGGAAGGGGAGGGGTGTaGACATGGGTAGGACCCTTG +
Preference number: 4 (lower is better)
Translates to: TLCPAAEALQLSSTLLALGRGGV*TWVGPL
Trigger: CAAGGGTCCTACCCATGTTCACACCCCTCCCCTTCC...CAGAGCCAAGAGGGTGCTGCTCAGTTGCAGGGCCTCCGCAGCTGGACAGAGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR TCA 90 bp ACTCTCTGTCCAGCTGCGGAGGCCCTGCAACTGAGCAGCACCCTCTTGGCTCTGGCCGGGCATATTCACTaGGAGTGCGCAAGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: TLCPAAEALQLSSTLLALAGHIH*ECARLE
Trigger: CTCCAGCCTTGCGCACTCTCAGTGAATATGCCCGGC...CAGAGCCAAGAGGGTGCTGCTCAGTTGCAGGGCCTCCGCAGCTGGACAGAGAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR TCA 90 bp ATCCTCGCCACCTCCCCACCTCTGCACACCACATCGGGCCTTGGCCTTCTGTCTGGTAAGGTGAGACCCTaGGGCCAGGGGGTCAATGAG +
Preference number: 4 (lower is better)
Translates to: ILATSPPLHTTSGLGLLSGKVRP*GQGVNE
Trigger: CTCATTGACCCCCTGGCCTCAGGGTCTCACCTTACC...AGACAGAAGGCCAAGGCCCGATGTGGTGTGCAGAGGTGGGGAGGTGGCGAGGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR TCA 90 bp ACTCTCTGTCCAGCTGCGGAGGCCCTGCAACTGAGCAGCACCCTCTTGGCTCTGTTCTCGTGCAGAGGGTaGGGAAGCAGGGGGTTAGGG +
Preference number: 4 (lower is better)
Translates to: TLCPAAEALQLSSTLLALFSCRG*GSRGLG
Trigger: CCCTAACCCCCTGCTTCCTCACCCTCTGCACGAGAA...CAGAGCCAAGAGGGTGCTGCTCAGTTGCAGGGCCTCCGCAGCTGGACAGAGAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR TCA 90 bp CCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCACCTCCCCACCTACACTGTGCAGCGGGTaGTGGGCATGCAGCCACTGC +
Preference number: 4 (lower is better)
Translates to: PGPRFCALSVPILATSPPTLCSG*WACSHC
Trigger: GCAGTGGCTGCATGCCCATCACCCGCTGCACAGTGT...AGGTGGGGAGGTGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR GCA 90 bp CCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCACCTCCCCACCTCATGGCGTAAGGGTGTaGGTGGTGGGAGCTACCGCC +
Preference number: 4 (lower is better)
Translates to: PGPRFCALSVPILATSPPHGVRV*VVGATA
Trigger: GGCGGTAGCTCCCACCACGCACACCCTTACGCCATG...AGGTGGGGAGGTGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR GCA 90 bp GACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCACCTCCCCACACCCTTTCTGCGTGCTaGCTCTCAGCTGCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: DLVQDSVRFLSPSSPPPHTLSAC*LSAASR
Trigger: GCGGCTGGCAGCTGAGAGGCAGCACGCAGAAAGGGT...GTGGGGAGGTGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR GCA 90 bp GACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCACCTCCCCACTCCAGCGCCAAGCGCTaGAGCTCAGCTGACTGTGCG +
Preference number: 4 (lower is better)
Translates to: DLVQDSVRFLSPSSPPPHSSAKR*SSADCA
Trigger: CGCACAGTCAGCTGAGCTGCAGCGCTTGGCGCTGGA...GTGGGGAGGTGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR GCA 90 bp GACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCACCTCCCCACGCATGCAGCCACTGCTaGTGTTCCAGCGCCAAGCGC +
Preference number: 4 (lower is better)
Translates to: DLVQDSVRFLSPSSPPPHACSHC*CSSAKR
Trigger: GCGCTTGGCGCTGGAACAGCAGCAGTGGCTGCATGC...GTGGGGAGGTGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR GCA 90 bp ATCCTCGCCACCTCCCCACCTCTGCACACCACATCGGGCCTTGGCCTTCTGTCTCACTCTCTGTCCAGCTaGGGAGGCCCTGCAACTGAG +
Preference number: 4 (lower is better)
Translates to: ILATSPPLHTTSGLGLLSHSLSS*GGPATE
Trigger: CTCAGTTGCAGGGCCTCCGCAGCTGGACAGAGAGTG...AGACAGAAGGCCAAGGCCCGATGTGGTGTGCAGAGGTGGGGAGGTGGCGAGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR GCA 90 bp GACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCACCTCCCCACCCACCTCCCCACCTCTaGACACCACATCGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: DLVQDSVRFLSPSSPPPHPPPHL*TPHRAL
Trigger: CAAGGCCCGATGTGGTGTGCAGAGGTGGGGAGGTGG...GTGGGGAGGTGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR GCA 90 bp ATCCTCGCCACCTCCCCACCTCTGCACACCACATCGGGCCTTGGCCTTCTGTCTGCAAGGGGCATACATTaGAGAGGGGGCGCGCACACA +
Preference number: 4 (lower is better)
Translates to: ILATSPPLHTTSGLGLLSARGIH*RGGAHT
Trigger: TGTGTGCGCGCCCCCTCTGCAATGTATGCCCCTTGC...AGACAGAAGGCCAAGGCCCGATGTGGTGTGCAGAGGTGGGGAGGTGGCGAGGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CCA 90 bp ACTCTCTGTCCAGCTGCGGAGGCCCTGCAACTGAGCAGCACCCTCTTGGCTCTGATCGGAGGGAGACTGTaGCCGAGGGAGTTCCTGCTC +
Preference number: 4 (lower is better)
Translates to: TLCPAAEALQLSSTLLALIGGRL*PREFLL
Trigger: GAGCAGGAACTCCCTCGGCCACAGTCTCCCTCCGAT...CAGAGCCAAGAGGGTGCTGCTCAGTTGCAGGGCCTCCGCAGCTGGACAGAGAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CCA 90 bp GACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCACCTCCCCACTCGAGGGGTGCTGTCTaGCGGTTGAGGGGAAGGAGG +
Preference number: 4 (lower is better)
Translates to: DLVQDSVRFLSPSSPPPHSRGAV*RLRGRR
Trigger: CCTCCTTCCCCTCAACCGCCAGACAGCACCCCTCGA...GTGGGGAGGTGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CCA 90 bp ATCCTCGCCACCTCCCCACCTCTGCACACCACATCGGGCCTTGGCCTTCTGTCTGCCCCAGGAGGAGCCTaGAACATTCGAGATGTGGGG +
Preference number: 4 (lower is better)
Translates to: ILATSPPLHTTSGLGLLSAPGGA*NIRDVG
Trigger: CCCCACATCTCGAATGTTCCAGGCTCCTCCTGGGGC...AGACAGAAGGCCAAGGCCCGATGTGGTGTGCAGAGGTGGGGAGGTGGCGAGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CCA 90 bp GACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCACCTCCCCACGGTAGGCGGCTTTGTTaGGGGAGCACCACTAGCCCC +
Preference number: 4 (lower is better)
Translates to: DLVQDSVRFLSPSSPPPHGRRLC*GSTTSP
Trigger: GGGGCTAGTGGTGCTCCCCCAACAAAGCCGCCTACC...GTGGGGAGGTGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CCA 90 bp AGGAAGAGAGACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCAGGGTGGGCGGTGGACTaGGCCCCAGTAGAGGGAGGG +
Preference number: 4 (lower is better)
Translates to: RKRDLVQDSVRFLSPSSPGWAVD*APVEGG
Trigger: CCCTCCCTCTACTGGGGCCCAGTCCACCGCCCACCC...TGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTCTCTCTTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CCA 90 bp GACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCACCTCCCCACCAGGTGTGCTGGCCCTaGTGGGTAGGGCCTCAGAGA +
Preference number: 4 (lower is better)
Translates to: DLVQDSVRFLSPSSPPPHQVCWP*WVGPQR
Trigger: TCTCTGAGGCCCTACCCACCAGGGCCAGCACACCTG...GTGGGGAGGTGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CCA 90 bp CCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCACCTCCCCACCTTGTATCCGGGTGGGGTaGCTGTCTTGTAGGCCCCCG +
Preference number: 4 (lower is better)
Translates to: PGPRFCALSVPILATSPPCIRVG*LSCRPP
Trigger: CGGGGGCCTACAAGACAGCCACCCCACCCGGATACA...AGGTGGGGAGGTGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CCA 90 bp GACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCACCTCCCCACTGTATCCGGGTGGGGTaGCTGTCTTGTAGGCCCCCG +
Preference number: 4 (lower is better)
Translates to: DLVQDSVRFLSPSSPPPHCIRVG*LSCRPP
Trigger: CGGGGGCCTACAAGACAGCCACCCCACCCGGATACA...GTGGGGAGGTGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CCA 90 bp AAGGAAGAGAGACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCAGGGGCCGCAGGTGGTaGTGGCAGCGATGGCAGGCC +
Preference number: 4 (lower is better)
Translates to: KEERPGPRFCALSVPILARGRRW*WQRWQA
Trigger: GGCCTGCCATCGCTGCCACCACCACCTGCGGCCCCT...GGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTCTCTCTTCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CCA 90 bp AGGAAGAGAGACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCAGGCAGGGGCCGCAGGTaGTGGTGGCAGCGATGGCAG +
Preference number: 4 (lower is better)
Translates to: RKRDLVQDSVRFLSPSSPGRGRR*WWQRWQ
Trigger: CTGCCATCGCTGCCACCACCACCTGCGGCCCCTGCC...TGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTCTCTCTTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CCA 90 bp CCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCACCTCCCCACCTCACTGGGCCCAGAGATaGGCATTCCACCGGAGCACG +
Preference number: 4 (lower is better)
Translates to: PGPRFCALSVPILATSPPHWAQR*AFHRST
Trigger: CGTGCTCCGGTGGAATGCCCATCTCTGGGCCCAGTG...AGGTGGGGAGGTGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CCA 90 bp ATCCTCGCCACCTCCCCACCTCTGCACACCACATCGGGCCTTGGCCTTCTGTCTCACCACATCGGGCCTTaGCCTTCTGTCTGTCCCTCC +
Preference number: 4 (lower is better)
Translates to: ILATSPPLHTTSGLGLLSHHIGP*PSVCPS
Trigger: GGAGGGACAGACAGAAGGCCAAGGCCCGATGTGGTG...AGACAGAAGGCCAAGGCCCGATGTGGTGTGCAGAGGTGGGGAGGTGGCGAGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CCA 90 bp AGGAAGAGAGACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCACTCGGGACGGCTGGCTaGCTCCGAGCGGGATTCCGG +
Preference number: 4 (lower is better)
Translates to: RKRDLVQDSVRFLSPSSPLGTAG*LRAGFR
Trigger: CCGGAATCCCGCTCGGAGCCAGCCAGCCGTCCCGAG...TGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTCTCTCTTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396684.3
CDS-3UTR TCA 90 bp GGACAAGGAAGAGAGACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCACTGCTGGACGTGCTaGCCCCTCCAGGGGAGGCCC +
Preference number: 4 (lower is better)
Translates to: GQGRETWSKILCAFCPHPHCWTC*PLQGRP
Trigger: GGGCCTCCCCTGGAGGGGTCAGCACGTCCAGCAGTG...AGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTCTCTCTTCCTTGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR TCA 90 bp ACTCTCTGTCCAGCTGCGGAGGCCCTGCAACTGAGCAGCACCCTCTTGGCTCTGGTGCTGTCTGGCGGTTaGGGGGAAGGAGGAAAGAGT +
Preference number: 4 (lower is better)
Translates to: TLCPAAEALQLSSTLLALVLSGG*GEGGKS
Trigger: ACTCTTTCCTCCTTCCCCTCAACCGCCAGACAGCAC...CAGAGCCAAGAGGGTGCTGCTCAGTTGCAGGGCCTCCGCAGCTGGACAGAGAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR TCA 90 bp ATCCTCGCCACCTCCCCACCTCTGCACACCACATCGGGCCTTGGCCTTCTGTCTAGGCTGATGCATTGTTaGGGGGTCTCAGGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: ILATSPPLHTTSGLGLLSRLMHC*GVSGQV
Trigger: CACCTGCCCTGAGACCCCTCAACAATGCATCAGCCT...AGACAGAAGGCCAAGGCCCGATGTGGTGTGCAGAGGTGGGGAGGTGGCGAGGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR TCA 90 bp CCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCACCTCCCCACCTGGAAGGGGAGGGGTGTaGACATGGGTAGGACCCTTG +
Preference number: 4 (lower is better)
Translates to: PGPRFCALSVPILATSPPGRGGV*TWVGPL
Trigger: CAAGGGTCCTACCCATGTTCACACCCCTCCCCTTCC...AGGTGGGGAGGTGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR TCA 90 bp CCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCACCTCCCCACCTGATGGGGAGTCACATTaGGCATCTGCAGCCGGGCCA +
Preference number: 4 (lower is better)
Translates to: PGPRFCALSVPILATSPPDGESH*ASAAGP
Trigger: TGGCCCGGCTGCAGATGCTCAATGTGACTCCCCATC...AGGTGGGGAGGTGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR TCA 90 bp ACTCTCTGTCCAGCTGCGGAGGCCCTGCAACTGAGCAGCACCCTCTTGGCTCTGTGGGAGTGCTGGTGGTaGTGGGGAGTCACATTGAGC +
Preference number: 4 (lower is better)
Translates to: TLCPAAEALQLSSTLLALWECWW*WGVTLS
Trigger: GCTCAATGTGACTCCCCATCACCACCAGCACTCCCA...CAGAGCCAAGAGGGTGCTGCTCAGTTGCAGGGCCTCCGCAGCTGGACAGAGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR TCA 90 bp AAGGAAGAGAGACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCGGGATCCGGGTAAGGTaGGACCCTGAGGCCAGGGGG +
Preference number: 4 (lower is better)
Translates to: KEERPGPRFCALSVPILAGIRVR*DPEARG
Trigger: CCCCCTGGCCTCAGGGTCTCACCTTACCCGGATCCC...GGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTCTCTCTTCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR TCA 90 bp GACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCACCTCCCCACTTCTCGTGCAGAGGGTaGGGAAGCAGGGGGTTAGGG +
Preference number: 4 (lower is better)
Translates to: DLVQDSVRFLSPSSPPPHFSCRG*GSRGLG
Trigger: CCCTAACCCCCTGCTTCCTCACCCTCTGCACGAGAA...GTGGGGAGGTGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR GCA 90 bp GACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCACCTCCCCACGGCCTGGATGGGCATTaGTGTTGGCTAAGAGGCGGC +
Preference number: 4 (lower is better)
Translates to: DLVQDSVRFLSPSSPPPHGLDGH*CWLRGG
Trigger: GCCGCCTCTTAGCCAACAGCAATGCCCATCCAGGCC...GTGGGGAGGTGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR GCA 90 bp CCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCACCTCCCCACCTGGCCTGGATGGGCATTaGTGTTGGCTAAGAGGCGGC +
Preference number: 4 (lower is better)
Translates to: PGPRFCALSVPILATSPPGLDGH*CWLRGG
Trigger: GCCGCCTCTTAGCCAACAGCAATGCCCATCCAGGCC...AGGTGGGGAGGTGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR GCA 90 bp ATCCTCGCCACCTCCCCACCTCTGCACACCACATCGGGCCTTGGCCTTCTGTCTGTCACATTGAGCATCTaGAGCCGGGCCAGTGGGTCA +
Preference number: 4 (lower is better)
Translates to: ILATSPPLHTTSGLGLLSVTLSI*SRASGS
Trigger: TGACCCACTGGCCCGGCTGCAGATGCTCAATGTGAC...AGACAGAAGGCCAAGGCCCGATGTGGTGTGCAGAGGTGGGGAGGTGGCGAGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR GCA 90 bp ATCCTCGCCACCTCCCCACCTCTGCACACCACATCGGGCCTTGGCCTTCTGTCTTCTTGCTGGTGCAGGTaGAGGTGCGAGTGGATGTGG +
Preference number: 4 (lower is better)
Translates to: ILATSPPLHTTSGLGLLSSCWCR*RCEWMW
Trigger: CCACATCCACTCGCACCTGCACCTGCACCAGCAAGA...AGACAGAAGGCCAAGGCCCGATGTGGTGTGCAGAGGTGGGGAGGTGGCGAGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR GCA 90 bp CCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCACCTCCCCACCTCACTCTCTGTCCAGCTaGGGAGGCCCTGCAACTGAG +
Preference number: 4 (lower is better)
Translates to: PGPRFCALSVPILATSPPHSLSS*GGPATE
Trigger: CTCAGTTGCAGGGCCTCCGCAGCTGGACAGAGAGTG...AGGTGGGGAGGTGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CCA 90 bp CCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCACCTCCCCACCTATCGGAGGGAGACTGTaGCCGAGGGAGTTCCTGCTC +
Preference number: 4 (lower is better)
Translates to: PGPRFCALSVPILATSPPIGGRL*PREFLL
Trigger: GAGCAGGAACTCCCTCGGCCACAGTCTCCCTCCGAT...AGGTGGGGAGGTGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CCA 90 bp AAGGAAGAGAGACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCGGGCGGGCTGGGCCCTaGGACAGGCCAGAAGATGAG +
Preference number: 4 (lower is better)
Translates to: KEERPGPRFCALSVPILAGRAGP*DRPEDE
Trigger: CTCATCTTCTGGCCTGTCCCAGGGCCCAGCCCGCCC...GGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTCTCTCTTCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CCA 90 bp GACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCACCTCCCCACAATGGGAGTAGTGGGTaGGGGGTGCTGCTTACCCCC +
Preference number: 4 (lower is better)
Translates to: DLVQDSVRFLSPSSPPPHNGSSG*GVLLTP
Trigger: GGGGGTAAGCAGCACCCCCCACCCACTACTCCCATT...GTGGGGAGGTGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CCA 90 bp GACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCACCTCCCCACAGTTGGGCCCTTCTCTaGGCCAGGAGGAAGTCCACC +
Preference number: 4 (lower is better)
Translates to: DLVQDSVRFLSPSSPPPHSWALL*ARRKST
Trigger: GGTGGACTTCCTCCTGGCCCAGAGAAGGGCCCAACT...GTGGGGAGGTGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CCA 90 bp ATCCTCGCCACCTCCCCACCTCTGCACACCACATCGGGCCTTGGCCTTCTGTCTGCAGGAGGCAGAGAGTaGGGTGAAGGAGCCAGAGTT +
Preference number: 4 (lower is better)
Translates to: ILATSPPLHTTSGLGLLSAGGRE*GEGARV
Trigger: AACTCTGGCTCCTTCACCCCACTCTCTGCCTCCTGC...AGACAGAAGGCCAAGGCCCGATGTGGTGTGCAGAGGTGGGGAGGTGGCGAGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CCA 90 bp ATCCTCGCCACCTCCCCACCTCTGCACACCACATCGGGCCTTGGCCTTCTGTCTGGGAAGGGGCCTGGATaGGCATTGCTGTTGGCTAAG +
Preference number: 4 (lower is better)
Translates to: ILATSPPLHTTSGLGLLSGKGPG*ALLLAK
Trigger: CTTAGCCAACAGCAATGCCCATCCAGGCCCCTTCCC...AGACAGAAGGCCAAGGCCCGATGTGGTGTGCAGAGGTGGGGAGGTGGCGAGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CCA 90 bp GACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCACCTCCCCACCCAGGGAGGGAGACATaGCGTAAGGGTGTGCGTGGT +
Preference number: 4 (lower is better)
Translates to: DLVQDSVRFLSPSSPPPHPGRET*RKGVRG
Trigger: ACCACGCACACCCTTACGCCATGTCTCCCTCCCTGG...GTGGGGAGGTGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CCA 90 bp CCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCACCTCCCCACCTCCAGGGAGGGAGACATaGCGTAAGGGTGTGCGTGGT +
Preference number: 4 (lower is better)
Translates to: PGPRFCALSVPILATSPPPGRET*RKGVRG
Trigger: ACCACGCACACCCTTACGCCATGTCTCCCTCCCTGG...AGGTGGGGAGGTGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CCA 90 bp AAGGAAGAGAGACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCTGGGGGCAGGTGTGCTaGCCCTGGTGGGTAGGGCCT +
Preference number: 4 (lower is better)
Translates to: KEERPGPRFCALSVPILAWGQVC*PWWVGP
Trigger: AGGCCCTACCCACCAGGGCCAGCACACCTGCCCCCA...GGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTCTCTCTTCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CCA 90 bp GACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCACCTCCCCACGCTTCTTGGCCAGCTTaGAGCCCTCCAGTGGCACGA +
Preference number: 4 (lower is better)
Translates to: DLVQDSVRFLSPSSPPPHASWPA*SPPVAR
Trigger: TCGTGCCACTGGAGGGCTCCAAGCTGGCCAAGAAGC...GTGGGGAGGTGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CCA 90 bp CCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCACCTCCCCACCTGCTTCTTGGCCAGCTTaGAGCCCTCCAGTGGCACGA +
Preference number: 4 (lower is better)
Translates to: PGPRFCALSVPILATSPPASWPA*SPPVAR
Trigger: TCGTGCCACTGGAGGGCTCCAAGCTGGCCAAGAAGC...AGGTGGGGAGGTGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CCA 90 bp ACTCTCTGTCCAGCTGCGGAGGCCCTGCAACTGAGCAGCACCCTCTTGGCTCTGGAGAGTGCGCAAGGCTaGAGTGTCAGGACCCAGGTA +
Preference number: 4 (lower is better)
Translates to: TLCPAAEALQLSSTLLALESAQG*SVRTQV
Trigger: TACCTGGGTCCTGACACTCCAGCCTTGCGCACTCTC...CAGAGCCAAGAGGGTGCTGCTCAGTTGCAGGGCCTCCGCAGCTGGACAGAGAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CCA 90 bp GGACAAGGAAGAGAGACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCTGCAGCCGGGCCAGTaGGTCATTGCCCAGGGCCGC +
Preference number: 4 (lower is better)
Translates to: GQGRETWSKILCAFCPHPLQPGQ*VIAQGR
Trigger: GCGGCCCTGGGCAATGACCCACTGGCCCGGCTGCAG...AGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTCTCTCTTCCTTGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CCA 90 bp GACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCACCTCCCCACAGGTGCAGGTGCGAGTaGATGTGGGAGTGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: DLVQDSVRFLSPSSPPPHRCRCE*MWECWW
Trigger: CCACCAGCACTCCCACATCCACTCGCACCTGCACCT...GTGGGGAGGTGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CCA 90 bp CCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCACCTCCCCACCTAGGTGCAGGTGCGAGTaGATGTGGGAGTGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: PGPRFCALSVPILATSPPRCRCE*MWECWW
Trigger: CCACCAGCACTCCCACATCCACTCGCACCTGCACCT...AGGTGGGGAGGTGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR TCA 90 bp GACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCACCTCCCCACGTGCTGTCTGGCGGTTaGGGGGAAGGAGGAAAGAGT +
Preference number: 4 (lower is better)
Translates to: DLVQDSVRFLSPSSPPPHVLSGG*GEGGKS
Trigger: ACTCTTTCCTCCTTCCCCTCAACCGCCAGACAGCAC...GTGGGGAGGTGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR TCA 90 bp ATCCTCGCCACCTCCCCACCTCTGCACACCACATCGGGCCTTGGCCTTCTGTCTGGCTCCATGGGAGCATaGTATCCAGTGGGTGTCACA +
Preference number: 4 (lower is better)
Translates to: ILATSPPLHTTSGLGLLSGSMGA*YPVGVT
Trigger: TGTGACACCCACTGGATATCATGCTCCCATGGAGCC...AGACAGAAGGCCAAGGCCCGATGTGGTGTGCAGAGGTGGGGAGGTGGCGAGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR TCA 90 bp GACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCACCTCCCCACAGGCTGATGCATTGTTaGGGGGTCTCAGGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: DLVQDSVRFLSPSSPPPHRLMHC*GVSGQV
Trigger: CACCTGCCCTGAGACCCCTCAACAATGCATCAGCCT...GTGGGGAGGTGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR TCA 90 bp GACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCACCTCCCCACGTGATGGTGATGTGTTaGGACTGGTGGGTGGGCGGT +
Preference number: 4 (lower is better)
Translates to: DLVQDSVRFLSPSSPPPHVMVMC*DWWVGG
Trigger: ACCGCCCACCCACCAGTCTCAACACATCACCATCAC...GTGGGGAGGTGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR TCA 90 bp AGGAAGAGAGACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCAGGAGCACGGCCCTCCTaGGCCAACTTCACGCTGCGT +
Preference number: 4 (lower is better)
Translates to: RKRDLVQDSVRFLSPSSPGARPS*ANFTLR
Trigger: ACGCAGCGTGAAGTTGGCTCAGGAGGGCCGTGCTCC...TGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTCTCTCTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR TCA 90 bp AGGAAGAGAGACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCAGGCCCCAGGCTCGGATaGAAGGGGAAAGGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: RKRDLVQDSVRFLSPSSPGPRLG*KGKGCR
Trigger: CCTGCACCCTTTCCCCTTTCATCCGAGCCTGGGGCC...TGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTCTCTCTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR TCA 90 bp GACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCACCTCCCCACCAGCTGATGAGCTGCTaGCATCGGGGCAGAAAGGGA +
Preference number: 4 (lower is better)
Translates to: DLVQDSVRFLSPSSPPPHQLMSC*HRGRKG
Trigger: TCCCTTTCTGCCCCGATGTCAGCAGCTCATCAGCTG...GTGGGGAGGTGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR TCA 90 bp ATCCTCGCCACCTCCCCACCTCTGCACACCACATCGGGCCTTGGCCTTCTGTCTGCCATGGTGCTCTCTTaGTCGCAGGTTCTACAGTGG +
Preference number: 4 (lower is better)
Translates to: ILATSPPLHTTSGLGLLSAMVLS*SQVLQW
Trigger: CCACTGTAGAACCTGCGATCAAGAGAGCACCATGGC...AGACAGAAGGCCAAGGCCCGATGTGGTGTGCAGAGGTGGGGAGGTGGCGAGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR GCA 90 bp AAGGAAGAGAGACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCGGCTCCTGTTTGATCTaGGTGGCGCTCAGGGGCGGC +
Preference number: 4 (lower is better)
Translates to: KEERPGPRFCALSVPILAGSCLI*VALRGG
Trigger: GCCGCCCCTGAGCGCCACGCAGATCAAACAGGAGCC...GGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTCTCTCTTCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR GCA 90 bp GACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCACCTCCCCACGTCACATTGAGCATCTaGAGCCGGGCCAGTGGGTCA +
Preference number: 4 (lower is better)
Translates to: DLVQDSVRFLSPSSPPPHVTLSI*SRASGS
Trigger: TGACCCACTGGCCCGGCTGCAGATGCTCAATGTGAC...GTGGGGAGGTGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR GCA 90 bp GACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCACCTCCCCACTCTTGCTGGTGCAGGTaGAGGTGCGAGTGGATGTGG +
Preference number: 4 (lower is better)
Translates to: DLVQDSVRFLSPSSPPPHSCWCR*RCEWMW
Trigger: CCACATCCACTCGCACCTGCACCTGCACCAGCAAGA...GTGGGGAGGTGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR GCA 90 bp ACTCTCTGTCCAGCTGCGGAGGCCCTGCAACTGAGCAGCACCCTCTTGGCTCTGATAGCATCTTGCTGGTaGAGGTGCAGGTGCGAGTGG +
Preference number: 4 (lower is better)
Translates to: TLCPAAEALQLSSTLLALIASCW*RCRCEW
Trigger: CCACTCGCACCTGCACCTGCACCAGCAAGATGCTAT...CAGAGCCAAGAGGGTGCTGCTCAGTTGCAGGGCCTCCGCAGCTGGACAGAGAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CCA 90 bp ACTCTCTGTCCAGCTGCGGAGGCCCTGCAACTGAGCAGCACCCTCTTGGCTCTGCCCACAGCTGTGGTCTaGGAAGCAGGATCTCCAAGT +
Preference number: 4 (lower is better)
Translates to: TLCPAAEALQLSSTLLALPTAVV*EAGSPS
Trigger: ACTTGGAGATCCTGCTTCCCAGACCACAGCTGTGGG...CAGAGCCAAGAGGGTGCTGCTCAGTTGCAGGGCCTCCGCAGCTGGACAGAGAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CCA 90 bp ACTCTCTGTCCAGCTGCGGAGGCCCTGCAACTGAGCAGCACCCTCTTGGCTCTGTTCAAAGCTAGCCTCTaGCTGTCGAGGGGTGCTGTC +
Preference number: 4 (lower is better)
Translates to: TLCPAAEALQLSSTLLALFKASL*LSRGAV
Trigger: GACAGCACCCCTCGACAGCCAGAGGCTAGCTTTGAA...CAGAGCCAAGAGGGTGCTGCTCAGTTGCAGGGCCTCCGCAGCTGGACAGAGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CCA 90 bp GACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCACCTCCCCACGTTCCCACCACCCACTaGAGTGGTAGGCGGCTTTGT +
Preference number: 4 (lower is better)
Translates to: DLVQDSVRFLSPSSPPPHVPTTH*SGRRLC
Trigger: ACAAAGCCGCCTACCACTCCAGTGGGTGGTGGGAAC...GTGGGGAGGTGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CCA 90 bp CCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCACCTCCCCACCTGTTCCCACCACCCACTaGAGTGGTAGGCGGCTTTGT +
Preference number: 4 (lower is better)
Translates to: PGPRFCALSVPILATSPPVPTTH*SGRRLC
Trigger: ACAAAGCCGCCTACCACTCCAGTGGGTGGTGGGAAC...AGGTGGGGAGGTGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CCA 90 bp ACTCTCTGTCCAGCTGCGGAGGCCCTGCAACTGAGCAGCACCCTCTTGGCTCTGAGGTTCGGTGTCACATaGGGGAAGTTGGCTGGTGGT +
Preference number: 4 (lower is better)
Translates to: TLCPAAEALQLSSTLLALRFGVT*GKLAGG
Trigger: ACCACCAGCCAACTTCCCCCATGTGACACCGAACCT...CAGAGCCAAGAGGGTGCTGCTCAGTTGCAGGGCCTCCGCAGCTGGACAGAGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CCA 90 bp GACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCACCTCCCCACGCAGGAGGCAGAGAGTaGGGTGAAGGAGCCAGAGTT +
Preference number: 4 (lower is better)
Translates to: DLVQDSVRFLSPSSPPPHAGGRE*GEGARV
Trigger: AACTCTGGCTCCTTCACCCCACTCTCTGCCTCCTGC...GTGGGGAGGTGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CCA 90 bp ACTCTCTGTCCAGCTGCGGAGGCCCTGCAACTGAGCAGCACCCTCTTGGCTCTGGATGGGCATTGCTGTTaGCTAAGAGGCGGCCATAGG +
Preference number: 4 (lower is better)
Translates to: TLCPAAEALQLSSTLLALDGHCC*LRGGHR
Trigger: CCTATGGCCGCCTCTTAGCCAACAGCAATGCCCATC...CAGAGCCAAGAGGGTGCTGCTCAGTTGCAGGGCCTCCGCAGCTGGACAGAGAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CCA 90 bp ATCCTCGCCACCTCCCCACCTCTGCACACCACATCGGGCCTTGGCCTTCTGTCTGATGGGCATTGCTGTTaGCTAAGAGGCGGCCATAGG +
Preference number: 4 (lower is better)
Translates to: ILATSPPLHTTSGLGLLSDGHCC*LRGGHR
Trigger: CCTATGGCCGCCTCTTAGCCAACAGCAATGCCCATC...AGACAGAAGGCCAAGGCCCGATGTGGTGTGCAGAGGTGGGGAGGTGGCGAGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CCA 90 bp AGGAAGAGAGACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCAGTTGAGACTGGTGGGTaGGCGGTGGACTGGGCCCCA +
Preference number: 4 (lower is better)
Translates to: RKRDLVQDSVRFLSPSSPVETGG*AVDWAP
Trigger: TGGGGCCCAGTCCACCGCCCACCCACCAGTCTCAAC...TGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTCTCTCTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CCA 90 bp AAGGAAGAGAGACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCGTGTGCTGGCCCTGGTaGGTAGGGCCTCAGAGACCC +
Preference number: 4 (lower is better)
Translates to: KEERPGPRFCALSVPILAVCWPW*VGPQRP
Trigger: GGGTCTCTGAGGCCCTACCCACCAGGGCCAGCACAC...GGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTCTCTCTTCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CCA 90 bp CCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCACCTCCCCACCTCTTGGAGCCCTCCAGTaGCACGAAGTACAGGTCGCT +
Preference number: 4 (lower is better)
Translates to: PGPRFCALSVPILATSPPLGALQ*HEVQVA
Trigger: AGCGACCTGTACTTCGTGCCACTGGAGGGCTCCAAG...AGGTGGGGAGGTGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CCA 90 bp GACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCACCTCCCCACCTTGGAGCCCTCCAGTaGCACGAAGTACAGGTCGCT +
Preference number: 4 (lower is better)
Translates to: DLVQDSVRFLSPSSPPPHLGALQ*HEVQVA
Trigger: AGCGACCTGTACTTCGTGCCACTGGAGGGCTCCAAG...GTGGGGAGGTGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CCA 90 bp AAGGAAGAGAGACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCGGTCGGCCCGCTTCTTaGCCAGCTTGGAGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: KEERPGPRFCALSVPILAGRPAS*PAWSPP
Trigger: TGGAGGGCTCCAAGCTGGCCAAGAAGCGGGCCGACC...GGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTCTCTCTTCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CCA 90 bp CCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCACCTCCCCACCTTCAAATGGAGGGCGATaGGGCACTGGGCCCAGAGAT +
Preference number: 4 (lower is better)
Translates to: PGPRFCALSVPILATSPPSNGGR*GTGPRD
Trigger: ATCTCTGGGCCCAGTGCCCCATCGCCCTCCATTTGA...AGGTGGGGAGGTGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CCA 90 bp ATCCTCGCCACCTCCCCACCTCTGCACACCACATCGGGCCTTGGCCTTCTGTCTTGGATAGCATCTTGCTaGTGCAGGTGCAGGTGCGAG +
Preference number: 4 (lower is better)
Translates to: ILATSPPLHTTSGLGLLSWIASC*CRCRCE
Trigger: CTCGCACCTGCACCTGCACCAGCAAGATGCTATCCA...AGACAGAAGGCCAAGGCCCGATGTGGTGTGCAGAGGTGGGGAGGTGGCGAGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CCA 90 bp ACTCTCTGTCCAGCTGCGGAGGCCCTGCAACTGAGCAGCACCCTCTTGGCTCTGGAGGCAGAGGCTGCATaGATAGCATCTTGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: TLCPAAEALQLSSTLLALEAEAA*IASCWC
Trigger: GCACCAGCAAGATGCTATCCATGCAGCCTCTGCCTC...CAGAGCCAAGAGGGTGCTGCTCAGTTGCAGGGCCTCCGCAGCTGGACAGAGAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CCA 90 bp ATCCTCGCCACCTCCCCACCTCTGCACACCACATCGGGCCTTGGCCTTCTGTCTGAGGCAGAGGCTGCATaGATAGCATCTTGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: ILATSPPLHTTSGLGLLSEAEAA*IASCWC
Trigger: GCACCAGCAAGATGCTATCCATGCAGCCTCTGCCTC...AGACAGAAGGCCAAGGCCCGATGTGGTGTGCAGAGGTGGGGAGGTGGCGAGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CCA 90 bp AGGAAGAGAGACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCAGCACCCTCTTGGCTCTaGGTGGCAGGCCAAGGGCAC +
Preference number: 4 (lower is better)
Translates to: RKRDLVQDSVRFLSPSSPAPSWL*VAGQGH
Trigger: GTGCCCTTGGCCTGCCACCCAGAGCCAAGAGGGTGC...TGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTCTCTCTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR TCA 90 bp AGGAAGAGAGACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCATGGGGAGAGGGCAGATaGCCAGGTAGTGGTTGGGCC +
Preference number: 4 (lower is better)
Translates to: RKRDLVQDSVRFLSPSSPWGEGR*PGSGWA
Trigger: GGCCCAACCACTACCTGGTCATCTGCCCTCTCCCCA...TGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTCTCTCTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR TCA 90 bp GGACAAGGAAGAGAGACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTGGAGCACGGCCCTCCTaGGCCAACTTCACGCTGCGT +
Preference number: 4 (lower is better)
Translates to: GQGRETWSKILCAFCPHPGARPS*ANFTLR
Trigger: ACGCAGCGTGAAGTTGGCTCAGGAGGGCCGTGCTCC...AGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTCTCTCTTCCTTGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR TCA 90 bp GACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCACCTCCCCACCCAGGAGACATGACATaGGGCCGGGCATATTCACTG +
Preference number: 4 (lower is better)
Translates to: DLVQDSVRFLSPSSPPPHPGDMT*GRAYSL
Trigger: CAGTGAATATGCCCGGCCTCATGTCATGTCTCCTGG...GTGGGGAGGTGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR TCA 90 bp ATCCTCGCCACCTCCCCACCTCTGCACACCACATCGGGCCTTGGCCTTCTGTCTGATTGCCAGGAGACATaGCATGAGGCCGGGCATATT +
Preference number: 4 (lower is better)
Translates to: ILATSPPLHTTSGLGLLSDCQET*HEAGHI
Trigger: AATATGCCCGGCCTCATGTCATGTCTCCTGGCAATC...AGACAGAAGGCCAAGGCCCGATGTGGTGTGCAGAGGTGGGGAGGTGGCGAGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR TCA 90 bp GACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCACCTCCCCACGCCATGGTGCTCTCTTaGTCGCAGGTTCTACAGTGG +
Preference number: 4 (lower is better)
Translates to: DLVQDSVRFLSPSSPPPHAMVLS*SQVLQW
Trigger: CCACTGTAGAACCTGCGATCAAGAGAGCACCATGGC...GTGGGGAGGTGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR GCA 90 bp ACTCTCTGTCCAGCTGCGGAGGCCCTGCAACTGAGCAGCACCCTCTTGGCTCTGGGAAGAGGAGGCTGCTaGAGAGCTACTACTAGAGGA +
Preference number: 4 (lower is better)
Translates to: TLCPAAEALQLSSTLLALGRGGC*RATTRG
Trigger: TCCTCTAGTAGTAGCTCTGCAGCAGCCTCCTCTTCC...CAGAGCCAAGAGGGTGCTGCTCAGTTGCAGGGCCTCCGCAGCTGGACAGAGAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR GCA 90 bp GGACAAGGAAGAGAGACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTGAAGGTCCCTGGGCCTaGAGGTGGCGAGGTTCCTCG +
Preference number: 4 (lower is better)
Translates to: GQGRETWSKILCAFCPHPEGPWA*RWRGSS
Trigger: CGAGGAACCTCGCCACCTGCAGGCCCAGGGACCTTC...AGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTCTCTCTTCCTTGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR GCA 90 bp GGACAAGGAAGAGAGACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTGGCTCCTGTTTGATCTaGGTGGCGCTCAGGGGCGGC +
Preference number: 4 (lower is better)
Translates to: GQGRETWSKILCAFCPHPGSCLI*VALRGG
Trigger: GCCGCCCCTGAGCGCCACGCAGATCAAACAGGAGCC...AGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTCTCTCTTCCTTGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR GCA 90 bp GGACAAGGAAGAGAGACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTGGGCCAGTGGGTCATTaGCCAGGGCCGCCACCCTTT +
Preference number: 4 (lower is better)
Translates to: GQGRETWSKILCAFCPHPGPVGH*PGPPPF
Trigger: AAAGGGTGGCGGCCCTGGGCAATGACCCACTGGCCC...AGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTCTCTCTTCCTTGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR GCA 90 bp GACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCACCTCCCCACATAGCATCTTGCTGGTaGAGGTGCAGGTGCGAGTGG +
Preference number: 4 (lower is better)
Translates to: DLVQDSVRFLSPSSPPPHIASCW*RCRCEW
Trigger: CCACTCGCACCTGCACCTGCACCAGCAAGATGCTAT...GTGGGGAGGTGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR GCA 90 bp CCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCACCTCCCCACCTCACCGAGGCAGAGGCTaGATGGATAGCATCTTGCTG +
Preference number: 4 (lower is better)
Translates to: PGPRFCALSVPILATSPPHRGRG*MDSILL
Trigger: CAGCAAGATGCTATCCATGCAGCCTCTGCCTCGGTG...AGGTGGGGAGGTGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR GCA 90 bp AAGGAAGAGAGACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCGCATGCAGCCACTGCTaGTGTTCCAGCGCCAAGCGC +
Preference number: 4 (lower is better)
Translates to: KEERPGPRFCALSVPILAACSHC*CSSAKR
Trigger: GCGCTTGGCGCTGGAACAGCAGCAGTGGCTGCATGC...GGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTCTCTCTTCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CCA 90 bp GACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCACCTCCCCACCCCACAGCTGTGGTCTaGGAAGCAGGATCTCCAAGT +
Preference number: 4 (lower is better)
Translates to: DLVQDSVRFLSPSSPPPHPTAVV*EAGSPS
Trigger: ACTTGGAGATCCTGCTTCCCAGACCACAGCTGTGGG...GTGGGGAGGTGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CCA 90 bp ACTCTCTGTCCAGCTGCGGAGGCCCTGCAACTGAGCAGCACCCTCTTGGCTCTGCTGCTTGTTGACCTTTaGGGTGGAGGCTTCCTCTAC +
Preference number: 4 (lower is better)
Translates to: TLCPAAEALQLSSTLLALLLVDL*GGGFLY
Trigger: GTAGAGGAAGCCTCCACCCCAAAGGTCAACAAGCAG...CAGAGCCAAGAGGGTGCTGCTCAGTTGCAGGGCCTCCGCAGCTGGACAGAGAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CCA 90 bp CCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCACCTCCCCACCTGTGCTTCGGTTGTCCTaGTCGATATCCCTAGGGTCG +
Preference number: 4 (lower is better)
Translates to: PGPRFCALSVPILATSPPVLRLS*SISLGS
Trigger: CGACCCTAGGGATATCGACCAGGACAACCGAAGCAC...AGGTGGGGAGGTGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CCA 90 bp AAGGAAGAGAGACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCTCGAGGGGTGCTGTCTaGCGGTTGAGGGGAAGGAGG +
Preference number: 4 (lower is better)
Translates to: KEERPGPRFCALSVPILASRGAV*RLRGRR
Trigger: CCTCCTTCCCCTCAACCGCCAGACAGCACCCCTCGA...GGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTCTCTCTTCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CCA 90 bp GACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCACCTCCCCACGGAACATTCGAGATGTaGGGGGCTCCATGGGAGCAT +
Preference number: 4 (lower is better)
Translates to: DLVQDSVRFLSPSSPPPHGTFEM*GAPWEH
Trigger: ATGCTCCCATGGAGCCCCCCACATCTCGAATGTTCC...GTGGGGAGGTGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CCA 90 bp AGGAAGAGAGACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCAGGTAGGCGGCTTTGTTaGGGGAGCACCACTAGCCCC +
Preference number: 4 (lower is better)
Translates to: RKRDLVQDSVRFLSPSSPGRRLC*GSTTSP
Trigger: GGGGCTAGTGGTGCTCCCCCAACAAAGCCGCCTACC...TGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTCTCTCTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CCA 90 bp ACTCTCTGTCCAGCTGCGGAGGCCCTGCAACTGAGCAGCACCCTCTTGGCTCTGAATAAGGAAACCTCATaGGGGGCGCTGGAGCAGAAG +
Preference number: 4 (lower is better)
Translates to: TLCPAAEALQLSSTLLALNKETS*GALEQK
Trigger: CTTCTGCTCCAGCGCCCCCCATGAGGTTTCCTTATT...CAGAGCCAAGAGGGTGCTGCTCAGTTGCAGGGCCTCCGCAGCTGGACAGAGAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CCA 90 bp AGGAAGAGAGACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCAGGGAGGGAAGGGGCCTaGATGGGCATTGCTGTTGGC +
Preference number: 4 (lower is better)
Translates to: RKRDLVQDSVRFLSPSSPGREGA*MGIAVG
Trigger: GCCAACAGCAATGCCCATCCAGGCCCCTTCCCTCCC...TGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTCTCTCTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CCA 90 bp AGGAAGAGAGACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCATCCTCGATAGCCCGGTaGGGTCCCCGTTCGGAAGGA +
Preference number: 4 (lower is better)
Translates to: RKRDLVQDSVRFLSPSSPSSIAR*GPRSEG
Trigger: TCCTTCCGAACGGGGACCCCACCGGGCTATCGAGGA...TGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTCTCTCTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CCA 90 bp ATCCTCGCCACCTCCCCACCTCTGCACACCACATCGGGCCTTGGCCTTCTGTCTACCTGGCAGACTGACTaGCATGGCTGGGTACATCTA +
Preference number: 4 (lower is better)
Translates to: ILATSPPLHTTSGLGLLSTWQTD*HGWVHL
Trigger: TAGATGTACCCAGCCATGCCAGTCAGTCTGCCAGGT...AGACAGAAGGCCAAGGCCCGATGTGGTGTGCAGAGGTGGGGAGGTGGCGAGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CCA 90 bp AGGAAGAGAGACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCAAGGGCGATGGGGCACTaGGCCCAGAGATGGGCATTC +
Preference number: 4 (lower is better)
Translates to: RKRDLVQDSVRFLSPSSPRAMGH*AQRWAF
Trigger: GAATGCCCATCTCTGGGCCCAGTGCCCCATCGCCCT...TGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTCTCTCTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CCA 90 bp GACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCACCTCCCCACCAGGGGCACGTAGAATaGATGGTTGCGATTGCCAGG +
Preference number: 4 (lower is better)
Translates to: DLVQDSVRFLSPSSPPPHQGHVE*MVAIAR
Trigger: CCTGGCAATCGCAACCATCCATTCTACGTGCCCCTG...GTGGGGAGGTGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CCA 90 bp CCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCACCTCCCCACCTCAGGGGCACGTAGAATaGATGGTTGCGATTGCCAGG +
Preference number: 4 (lower is better)
Translates to: PGPRFCALSVPILATSPPQGHVE*MVAIAR
Trigger: CCTGGCAATCGCAACCATCCATTCTACGTGCCCCTG...AGGTGGGGAGGTGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CCA 90 bp AAGGAAGAGAGACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCCCTCTCCCGGGCAGCTaGATCACTGCTGTACAGGGC +
Preference number: 4 (lower is better)
Translates to: KEERPGPRFCALSVPILAPLPGS*ITAVQG
Trigger: GCCCTGTACAGCAGTGATCCAGCTGCCCGGGAGAGG...GGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTCTCTCTTCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CCA 90 bp GACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCACCTCCCCACTGGATAGCATCTTGCTaGTGCAGGTGCAGGTGCGAG +
Preference number: 4 (lower is better)
Translates to: DLVQDSVRFLSPSSPPPHWIASC*CRCRCE
Trigger: CTCGCACCTGCACCTGCACCAGCAAGATGCTATCCA...GTGGGGAGGTGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CCA 90 bp GGACAAGGAAGAGAGACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTGCACCCTCTTGGCTCTaGGTGGCAGGCCAAGGGCAC +
Preference number: 4 (lower is better)
Translates to: GQGRETWSKILCAFCPHPAPSWL*VAGQGH
Trigger: GTGCCCTTGGCCTGCCACCCAGAGCCAAGAGGGTGC...AGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTCTCTCTTCCTTGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR TCA 90 bp CCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCACCTCCCCACCTCTCTGCCTGGGCAGCTaGATACAGAAACTTCTCTGC +
Preference number: 4 (lower is better)
Translates to: PGPRFCALSVPILATSPPLCLGS*IQKLLC
Trigger: GCAGAGAAGTTTCTGTATTCAGCTGCCCAGGCAGAG...AGGTGGGGAGGTGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR TCA 90 bp CCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCACCTCCCCACCTGGACAGGCCAGAAGATaGGTCAGAGTCATTCTCCAC +
Preference number: 4 (lower is better)
Translates to: PGPRFCALSVPILATSPPGQARR*VRVILH
Trigger: GTGGAGAATGACTCTGACTCATCTTCTGGCCTGTCC...AGGTGGGGAGGTGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR TCA 90 bp AGGAAGAGAGACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCAGCCAGGGGGAGAGGCTaGTGCATTGTTGAGGGGTCT +
Preference number: 4 (lower is better)
Translates to: RKRDLVQDSVRFLSPSSPARGRG*CIVEGS
Trigger: AGACCCCTCAACAATGCATCAGCCTCTCCCCCTGGC...TGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTCTCTCTTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR TCA 90 bp GGACAAGGAAGAGAGACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTTGGGGAGAGGGCAGATaGCCAGGTAGTGGTTGGGCC +
Preference number: 4 (lower is better)
Translates to: GQGRETWSKILCAFCPHPWGEGR*PGSGWA
Trigger: GGCCCAACCACTACCTGGTCATCTGCCCTCTCCCCA...AGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTCTCTCTTCCTTGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR TCA 90 bp AGGAAGAGAGACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCAGATGGGGAGTCACATTaGGCATCTGCAGCCGGGCCA +
Preference number: 4 (lower is better)
Translates to: RKRDLVQDSVRFLSPSSPDGESH*ASAAGP
Trigger: TGGCCCGGCTGCAGATGCTCAATGTGACTCCCCATC...TGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTCTCTCTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR TCA 90 bp AAGGAAGAGAGACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCGGTAAGGTGAGACCCTaGGGCCAGGGGGTCAATGAG +
Preference number: 4 (lower is better)
Translates to: KEERPGPRFCALSVPILAGKVRP*GQGVNE
Trigger: CTCATTGACCCCCTGGCCTCAGGGTCTCACCTTACC...GGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTCTCTCTTCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR TCA 90 bp GACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCACCTCCCCACGCAGCAAAGAGCTGGTaGCGAAGAACTTCGTTCTCG +
Preference number: 4 (lower is better)
Translates to: DLVQDSVRFLSPSSPPPHAAKSW*RRTSFS
Trigger: CGAGAACGAAGTTCTTCGTCACCAGCTCTTTGCTGC...GTGGGGAGGTGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR GCA 90 bp CCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCACCTCCCCACCTTGGACTTCTCAGCTTTaGCATCACTGCTGGACGTGC +
Preference number: 4 (lower is better)
Translates to: PGPRFCALSVPILATSPPWTSQL*HHCWTC
Trigger: GCACGTCCAGCAGTGATGGCAAAGCTGAGAAGTCCA...AGGTGGGGAGGTGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR GCA 90 bp CCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCACCTCCCCACCTGCCTTCTTGGCTGTCTaGCTGGACTTCTCAGCTTTG +
Preference number: 4 (lower is better)
Translates to: PGPRFCALSVPILATSPPAFLAV*LDFSAL
Trigger: CAAAGCTGAGAAGTCCAGGCAGACAGCCAAGAAGGC...AGGTGGGGAGGTGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR GCA 90 bp CCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCACCTCCCCACCTGGAAGAGGAGGCTGCTaGAGAGCTACTACTAGAGGA +
Preference number: 4 (lower is better)
Translates to: PGPRFCALSVPILATSPPGRGGC*RATTRG
Trigger: TCCTCTAGTAGTAGCTCTGCAGCAGCCTCCTCTTCC...AGGTGGGGAGGTGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR GCA 90 bp ACTCTCTGTCCAGCTGCGGAGGCCCTGCAACTGAGCAGCACCCTCTTGGCTCTGACTGGAAGAGGAGGCTaGTGCAGAGCTACTACTAGA +
Preference number: 4 (lower is better)
Translates to: TLCPAAEALQLSSTLLALTGRGG*CRATTR
Trigger: TCTAGTAGTAGCTCTGCAGCAGCCTCCTCTTCCAGT...CAGAGCCAAGAGGGTGCTGCTCAGTTGCAGGGCCTCCGCAGCTGGACAGAGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR GCA 90 bp AGGAAGAGAGACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCAGGGCAGCTGGATCACTaGTGTACAGGGCCGGGACAT +
Preference number: 4 (lower is better)
Translates to: RKRDLVQDSVRFLSPSSPGQLDH*CTGPGH
Trigger: ATGTCCCGGCCCTGTACAGCAGTGATCCAGCTGCCC...TGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTCTCTCTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR GCA 90 bp AAGGAAGAGAGACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCGGGCAGCTGGATCACTaGTGTACAGGGCCGGGACAT +
Preference number: 4 (lower is better)
Translates to: KEERPGPRFCALSVPILAGQLDH*CTGPGH
Trigger: ATGTCCCGGCCCTGTACAGCAGTGATCCAGCTGCCC...GGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTCTCTCTTCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR GCA 90 bp GGACAAGGAAGAGAGACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTACCCTTTCTGCGTGCTaGCTCTCAGCTGCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: GQGRETWSKILCAFCPHPTLSAC*LSAASR
Trigger: GCGGCTGGCAGCTGAGAGGCAGCACGCAGAAAGGGT...AGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTCTCTCTTCCTTGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR GCA 90 bp AAGGAAGAGAGACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCTGGGCATGCAGCCACTaGTGCTGTTCCAGCGCCAAG +
Preference number: 4 (lower is better)
Translates to: KEERPGPRFCALSVPILAWACSH*CCSSAK
Trigger: CTTGGCGCTGGAACAGCAGCAGTGGCTGCATGCCCA...GGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTCTCTCTTCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR GCA 90 bp AGGAAGAGAGACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCATGGGCATGCAGCCACTaGTGCTGTTCCAGCGCCAAG +
Preference number: 4 (lower is better)
Translates to: RKRDLVQDSVRFLSPSSPWACSH*CCSSAK
Trigger: CTTGGCGCTGGAACAGCAGCAGTGGCTGCATGCCCA...TGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTCTCTCTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR GCA 90 bp GGACAAGGAAGAGAGACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTGGGGGAGGGTGGGGGTaGTCCAAGGTCCAATGTAGG +
Preference number: 4 (lower is better)
Translates to: GQGRETWSKILCAFCPHPGGGWG*SKVQCR
Trigger: CCTACATTGGACCTTGGAGCACCCCCACCCTCCCCC...AGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTCTCTCTTCCTTGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR GCA 90 bp AGGAAGAGAGACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCAGCAAGGGGCATACATTaGAGAGGGGGCGCGCACACA +
Preference number: 4 (lower is better)
Translates to: RKRDLVQDSVRFLSPSSPARGIH*RGGAHT
Trigger: TGTGTGCGCGCCCCCTCTGCAATGTATGCCCCTTGC...TGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTCTCTCTTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CCA 90 bp AAGGAAGAGAGACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCGCCCCAGGAGGAGCCTaGAACATTCGAGATGTGGGG +
Preference number: 4 (lower is better)
Translates to: KEERPGPRFCALSVPILAAPGGA*NIRDVG
Trigger: CCCCACATCTCGAATGTTCCAGGCTCCTCCTGGGGC...GGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTCTCTCTTCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CCA 90 bp AGGAAGAGAGACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCACCATACCCTGTCCCATaGCGTGGGGAGAGGGCAGAT +
Preference number: 4 (lower is better)
Translates to: RKRDLVQDSVRFLSPSSPPYPVP*RGERAD
Trigger: ATCTGCCCTCTCCCCACGCCATGGGACAGGGTATGG...TGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTCTCTCTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CCA 90 bp AAGGAAGAGAGACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCCCATACCCTGTCCCATaGCGTGGGGAGAGGGCAGAT +
Preference number: 4 (lower is better)
Translates to: KEERPGPRFCALSVPILAPYPVP*RGERAD
Trigger: ATCTGCCCTCTCCCCACGCCATGGGACAGGGTATGG...GGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTCTCTCTTCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CCA 90 bp CCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCACCTCCCCACCTAATAAGGAAACCTCATaGGGGGCGCTGGAGCAGAAG +
Preference number: 4 (lower is better)
Translates to: PGPRFCALSVPILATSPPNKETS*GALEQK
Trigger: CTTCTGCTCCAGCGCCCCCCATGAGGTTTCCTTATT...AGGTGGGGAGGTGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CCA 90 bp GACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCACCTCCCCACAAGAGGAGGAAGAACTaGAAGAGGAGGCTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: DLVQDSVRFLSPSSPPPHKRRKN*KRRLLQ
Trigger: CTGCAGCAGCCTCCTCTTCCAGTTCTTCCTCCTCTT...GTGGGGAGGTGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CCA 90 bp CCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCACCTCCCCACCTACCTGGCAGACTGACTaGCATGGCTGGGTACATCTA +
Preference number: 4 (lower is better)
Translates to: PGPRFCALSVPILATSPPTWQTD*HGWVHL
Trigger: TAGATGTACCCAGCCATGCCAGTCAGTCTGCCAGGT...AGGTGGGGAGGTGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CCA 90 bp GGACAAGGAAGAGAGACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCACTGGGCCCAGAGATaGGCATTCCACCGGAGCACG +
Preference number: 4 (lower is better)
Translates to: GQGRETWSKILCAFCPHPHWAQR*AFHRST
Trigger: CGTGCTCCGGTGGAATGCCCATCTCTGGGCCCAGTG...AGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTCTCTCTTCCTTGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CCA 90 bp ATCCTCGCCACCTCCCCACCTCTGCACACCACATCGGGCCTTGGCCTTCTGTCTCAAGGAAGAGAGACCTaGTCCAAGATTCTGTGCGCT +
Preference number: 4 (lower is better)
Translates to: ILATSPPLHTTSGLGLLSQGRET*SKILCA
Trigger: AGCGCACAGAATCTTGGACCAGGTCTCTCTTCCTTG...AGACAGAAGGCCAAGGCCCGATGTGGTGTGCAGAGGTGGGGAGGTGGCGAGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR TCA 90 bp GGACAAGGAAGAGAGACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTGCCAGGGGGAGAGGCTaGTGCATTGTTGAGGGGTCT +
Preference number: 4 (lower is better)
Translates to: GQGRETWSKILCAFCPHPARGRG*CIVEGS
Trigger: AGACCCCTCAACAATGCATCAGCCTCTCCCCCTGGC...AGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTCTCTCTTCCTTGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR TCA 90 bp AAGGAAGAGAGACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCGTGATGGTGATGTGTTaGGACTGGTGGGTGGGCGGT +
Preference number: 4 (lower is better)
Translates to: KEERPGPRFCALSVPILAVMVMC*DWWVGG
Trigger: ACCGCCCACCCACCAGTCTCAACACATCACCATCAC...GGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTCTCTCTTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR TCA 90 bp GGACAAGGAAGAGAGACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTGCCGGGCATATTCACTaGGAGTGCGCAAGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: GQGRETWSKILCAFCPHPAGHIH*ECARLE
Trigger: CTCCAGCCTTGCGCACTCTCAGTGAATATGCCCGGC...AGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTCTCTCTTCCTTGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CCA 90 bp CCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCACCTCCCCACCTTCCAGTGTGGGCACCTaGAACTTTTGCAGGATCTGT +
Preference number: 4 (lower is better)
Translates to: PGPRFCALSVPILATSPPSSVGT*NFCRIC
Trigger: ACAGATCCTGCAAAAGTTCCAGGTGCCCACACTGGA...AGGTGGGGAGGTGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CCA 90 bp GACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCACCTCCCCACGAGCATGATATCCAGTaGGTGTCACAGAAGGATGGG +
Preference number: 4 (lower is better)
Translates to: DLVQDSVRFLSPSSPPPHEHDIQ*VSQKDG
Trigger: CCCATCCTTCTGTGACACCCACTGGATATCATGCTC...GTGGGGAGGTGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CCA 90 bp AAGGAAGAGAGACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCGGGAAGGGGCCTGGATaGGCATTGCTGTTGGCTAAG +
Preference number: 4 (lower is better)
Translates to: KEERPGPRFCALSVPILAGKGPG*ALLLAK
Trigger: CTTAGCCAACAGCAATGCCCATCCAGGCCCCTTCCC...GGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTCTCTCTTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CCA 90 bp AAGGAAGAGAGACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCGGGTTTGTATCCGGGTaGGGTGGCTGTCTTGTAGGC +
Preference number: 4 (lower is better)
Translates to: KEERPGPRFCALSVPILAGFVSG*GGCLVG
Trigger: GCCTACAAGACAGCCACCCCACCCGGATACAAACCC...GGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTCTCTCTTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CCA 90 bp AAGGAAGAGAGACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCTCAAATGGAGGGCGATaGGGCACTGGGCCCAGAGAT +
Preference number: 4 (lower is better)
Translates to: KEERPGPRFCALSVPILASNGGR*GTGPRD
Trigger: ATCTCTGGGCCCAGTGCCCCATCGCCCTCCATTTGA...GGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTCTCTCTTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CCA 90 bp GGACAAGGAAGAGAGACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTACTGCCCGGTTCAAATaGAGGGCGATGGGGCACTGG +
Preference number: 4 (lower is better)
Translates to: GQGRETWSKILCAFCPHPTARFK*RAMGHW
Trigger: CCAGTGCCCCATCGCCCTCCATTTGAACCGGGCAGT...AGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTCTCTCTTCCTTGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CCA 90 bp AGGAAGAGAGACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCAGAGAGTGCGCAAGGCTaGAGTGTCAGGACCCAGGTA +
Preference number: 4 (lower is better)
Translates to: RKRDLVQDSVRFLSPSSPESAQG*SVRTQV
Trigger: TACCTGGGTCCTGACACTCCAGCCTTGCGCACTCTC...TGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTCTCTCTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CCA 90 bp AGGAAGAGAGACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCAAGGGAGAGTTCCAGCTaGGTAGGGGATCCGGGTAAG +
Preference number: 4 (lower is better)
Translates to: RKRDLVQDSVRFLSPSSPRESSS*VGDPGK
Trigger: CTTACCCGGATCCCCTACCCAGCTGGAACTCTCCCT...TGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTCTCTCTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CCA 90 bp AAGGAAGAGAGACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCAGGGAGAGTTCCAGCTaGGTAGGGGATCCGGGTAAG +
Preference number: 4 (lower is better)
Translates to: KEERPGPRFCALSVPILARESSS*VGDPGK
Trigger: CTTACCCGGATCCCCTACCCAGCTGGAACTCTCCCT...GGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTCTCTCTTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CCA 90 bp GGACAAGGAAGAGAGACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCACCACATCGGGCCTTaGCCTTCTGTCTGTCCCTCC +
Preference number: 4 (lower is better)
Translates to: GQGRETWSKILCAFCPHPHHIGP*PSVCPS
Trigger: GGAGGGACAGACAGAAGGCCAAGGCCCGATGTGGTG...AGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTCTCTCTTCCTTGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR TCA 90 bp GGACAAGGAAGAGAGACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTTCCGACCCTGCTTGTTaGCCTTTGGGGTGGAGGCTT +
Preference number: 4 (lower is better)
Translates to: GQGRETWSKILCAFCPHPSDPAC*PLGWRL
Trigger: AAGCCTCCACCCCAAAGGTCAACAAGCAGGGTCGGA...AGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTCTCTCTTCCTTGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR TCA 90 bp ATCCTCGCCACCTCCCCACCTCTGCACACCACATCGGGCCTTGGCCTTCTGTCTGCTACTACTAGAGGATaGATAAGGAAACCTCATGGG +
Preference number: 4 (lower is better)
Translates to: ILATSPPLHTTSGLGLLSATTRG*IRKPHG
Trigger: CCCATGAGGTTTCCTTATTCATCCTCTAGTAGTAGC...AGACAGAAGGCCAAGGCCCGATGTGGTGTGCAGAGGTGGGGAGGTGGCGAGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR TCA 90 bp AGGAAGAGAGACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCATTGAACCTGGCAGACTaGCTGGCATGGCTGGGTACA +
Preference number: 4 (lower is better)
Translates to: RKRDLVQDSVRFLSPSSPLNLAD*LAWLGT
Trigger: TGTACCCAGCCATGCCAGTCAGTCTGCCAGGTTCAA...TGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTCTCTCTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR TCA 90 bp AAGGAAGAGAGACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCCCAGGAGACATGACATaGGGCCGGGCATATTCACTG +
Preference number: 4 (lower is better)
Translates to: KEERPGPRFCALSVPILAPGDMT*GRAYSL
Trigger: CAGTGAATATGCCCGGCCTCATGTCATGTCTCCTGG...GGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTCTCTCTTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR TCA 90 bp GGACAAGGAAGAGAGACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTTGGGAGTGCTGGTGGTaGTGGGGAGTCACATTGAGC +
Preference number: 4 (lower is better)
Translates to: GQGRETWSKILCAFCPHPWECWW*WGVTLS
Trigger: GCTCAATGTGACTCCCCATCACCACCAGCACTCCCA...AGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTCTCTCTTCCTTGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR TCA 90 bp GGACAAGGAAGAGAGACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCAGCTGATGAGCTGCTaGCATCGGGGCAGAAAGGGA +
Preference number: 4 (lower is better)
Translates to: GQGRETWSKILCAFCPHPQLMSC*HRGRKG
Trigger: TCCCTTTCTGCCCCGATGTCAGCAGCTCATCAGCTG...AGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTCTCTCTTCCTTGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR TCA 90 bp ACTCTCTGTCCAGCTGCGGAGGCCCTGCAACTGAGCAGCACCCTCTTGGCTCTGGCCACATCTAACAGATaGAATAATCACACCAACGGG +
Preference number: 4 (lower is better)
Translates to: TLCPAAEALQLSSTLLALATSNR*NNHTNG
Trigger: CCCGTTGGTGTGATTATTTCATCTGTTAGATGTGGC...CAGAGCCAAGAGGGTGCTGCTCAGTTGCAGGGCCTCCGCAGCTGGACAGAGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR GCA 90 bp GACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCACCTCCCCACATACAGAAACTTCTCTaGTCCACCCCAAGTTCCCCA +
Preference number: 4 (lower is better)
Translates to: DLVQDSVRFLSPSSPPPHIQKLL*STPSSP
Trigger: TGGGGAACTTGGGGTGGAGCAGAGAAGTTTCTGTAT...GTGGGGAGGTGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR GCA 90 bp CCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCACCTCCCCACCTATACAGAAACTTCTCTaGTCCACCCCAAGTTCCCCA +
Preference number: 4 (lower is better)
Translates to: PGPRFCALSVPILATSPPIQKLL*STPSSP
Trigger: TGGGGAACTTGGGGTGGAGCAGAGAAGTTTCTGTAT...AGGTGGGGAGGTGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR GCA 90 bp AGGAAGAGAGACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCATCCTCACTCCGACCCTaGTTGTTGACCTTTGGGGTG +
Preference number: 4 (lower is better)
Translates to: RKRDLVQDSVRFLSPSSPSSLRP*LLTFGV
Trigger: CACCCCAAAGGTCAACAAGCAGGGTCGGAGTGAGGA...TGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTCTCTCTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR GCA 90 bp AAGGAAGAGAGACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCTCCTCACTCCGACCCTaGTTGTTGACCTTTGGGGTG +
Preference number: 4 (lower is better)
Translates to: KEERPGPRFCALSVPILASSLRP*LLTFGV
Trigger: CACCCCAAAGGTCAACAAGCAGGGTCGGAGTGAGGA...GGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTCTCTCTTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR GCA 90 bp AAGGAAGAGAGACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCCACCGAGGCAGAGGCTaGATGGATAGCATCTTGCTG +
Preference number: 4 (lower is better)
Translates to: KEERPGPRFCALSVPILAHRGRG*MDSILL
Trigger: CAGCAAGATGCTATCCATGCAGCCTCTGCCTCGGTG...GGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTCTCTCTTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CCA 90 bp AGGAAGAGAGACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCAGGAACATTCGAGATGTaGGGGGCTCCATGGGAGCAT +
Preference number: 4 (lower is better)
Translates to: RKRDLVQDSVRFLSPSSPGTFEM*GAPWEH
Trigger: ATGCTCCCATGGAGCCCCCCACATCTCGAATGTTCC...TGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTCTCTCTTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CCA 90 bp GGACAAGGAAGAGAGACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTGGGTTTGTATCCGGGTaGGGTGGCTGTCTTGTAGGC +
Preference number: 4 (lower is better)
Translates to: GQGRETWSKILCAFCPHPGFVSG*GGCLVG
Trigger: GCCTACAAGACAGCCACCCCACCCGGATACAAACCC...AGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTCTCTCTTCCTTGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CCA 90 bp CCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCACCTCCCCACCTTCGCAGGTTCTACAGTaGCTTGTCGCTTTCCTTCTT +
Preference number: 4 (lower is better)
Translates to: PGPRFCALSVPILATSPPSQVLQ*LVAFLL
Trigger: AAGAAGGAAAGCGACAAGCCACTGTAGAACCTGCGA...AGGTGGGGAGGTGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CCA 90 bp GACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCACCTCCCCACTCGCAGGTTCTACAGTaGCTTGTCGCTTTCCTTCTT +
Preference number: 4 (lower is better)
Translates to: DLVQDSVRFLSPSSPPPHSQVLQ*LVAFLL
Trigger: AAGAAGGAAAGCGACAAGCCACTGTAGAACCTGCGA...GTGGGGAGGTGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR TCA 90 bp AAGGAAGAGAGACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCCTCACTTTCACTCTCTaGGATCTCCTCACTCCGACC +
Preference number: 4 (lower is better)
Translates to: KEERPGPRFCALSVPILALTFTL*DLLTPT
Trigger: GGTCGGAGTGAGGAGATCTCAGAGAGTGAAAGTGAG...GGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTCTCTCTTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR TCA 90 bp GGACAAGGAAGAGAGACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTGGCTCCATGGGAGCATaGTATCCAGTGGGTGTCACA +
Preference number: 4 (lower is better)
Translates to: GQGRETWSKILCAFCPHPGSMGA*YPVGVT
Trigger: TGTGACACCCACTGGATATCATGCTCCCATGGAGCC...AGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTCTCTCTTCCTTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR TCA 90 bp GACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCACCTCCCCACGCTACTACTAGAGGATaGATAAGGAAACCTCATGGG +
Preference number: 4 (lower is better)
Translates to: DLVQDSVRFLSPSSPPPHATTRG*IRKPHG
Trigger: CCCATGAGGTTTCCTTATTCATCCTCTAGTAGTAGC...GTGGGGAGGTGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR TCA 90 bp GGACAAGGAAGAGAGACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTTTGAACCTGGCAGACTaGCTGGCATGGCTGGGTACA +
Preference number: 4 (lower is better)
Translates to: GQGRETWSKILCAFCPHPLNLAD*LAWLGT
Trigger: TGTACCCAGCCATGCCAGTCAGTCTGCCAGGTTCAA...AGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTCTCTCTTCCTTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR TCA 90 bp AAGGAAGAGAGACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCGATTGCCAGGAGACATaGCATGAGGCCGGGCATATT +
Preference number: 4 (lower is better)
Translates to: KEERPGPRFCALSVPILADCQET*HEAGHI
Trigger: AATATGCCCGGCCTCATGTCATGTCTCCTGGCAATC...GGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTCTCTCTTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR GCA 90 bp AAGGAAGAGAGACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCTGGACTTCTCAGCTTTaGCATCACTGCTGGACGTGC +
Preference number: 4 (lower is better)
Translates to: KEERPGPRFCALSVPILAWTSQL*HHCWTC
Trigger: GCACGTCCAGCAGTGATGGCAAAGCTGAGAAGTCCA...GGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTCTCTCTTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR GCA 90 bp AGGAAGAGAGACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCAAGGGGTGGCACACGATaGTACGCAAAACAGCCACAT +
Preference number: 4 (lower is better)
Translates to: RKRDLVQDSVRFLSPSSPRGGTR*YAKQPH
Trigger: ATGTGGCTGTTTTGCGTAGCATCGTGTGCCACCCCT...TGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTCTCTCTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR GCA 90 bp AAGGAAGAGAGACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCAGGGGTGGCACACGATaGTACGCAAAACAGCCACAT +
Preference number: 4 (lower is better)
Translates to: KEERPGPRFCALSVPILARGGTR*YAKQPH
Trigger: ATGTGGCTGTTTTGCGTAGCATCGTGTGCCACCCCT...GGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTCTCTCTTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CCA 90 bp GGACAAGGAAGAGAGACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTAGTTCCCCACAGCTGTaGTCTGGGAAGCAGGATCTC +
Preference number: 4 (lower is better)
Translates to: GQGRETWSKILCAFCPHPSSPQL*SGKQDL
Trigger: GAGATCCTGCTTCCCAGACCACAGCTGTGGGGAACT...AGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTCTCTCTTCCTTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CCA 90 bp GGACAAGGAAGAGAGACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCTACTCGGGCCTTCTTaGCTGTCTGCCTGGACTTCT +
Preference number: 4 (lower is better)
Translates to: GQGRETWSKILCAFCPHPLLGPS*LSAWTS
Trigger: AGAAGTCCAGGCAGACAGCCAAGAAGGCCCGAGTAG...AGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTCTCTCTTCCTTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CCA 90 bp AGGAAGAGAGACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCAACTGACTGGCATGGCTaGGTACATCTACCACCTTGG +
Preference number: 4 (lower is better)
Translates to: RKRDLVQDSVRFLSPSSPTDWHG*VHLPPW
Trigger: CCAAGGTGGTAGATGTACCCAGCCATGCCAGTCAGT...TGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTCTCTCTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CCA 90 bp ATCCTCGCCACCTCCCCACCTCTGCACACCACATCGGGCCTTGGCCTTCTGTCTTATAAATTATTAGTGTaGGGAAGGGGCAAGGGGCAT +
Preference number: 4 (lower is better)
Translates to: ILATSPPLHTTSGLGLLSYKLLV*GRGKGH
Trigger: ATGCCCCTTGCCCCTTCCCCACACTAATAATTTATA...AGACAGAAGGCCAAGGCCCGATGTGGTGTGCAGAGGTGGGGAGGTGGCGAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR TCA 90 bp GGACAAGGAAGAGAGACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCTCACTTTCACTCTCTaGGATCTCCTCACTCCGACC +
Preference number: 4 (lower is better)
Translates to: GQGRETWSKILCAFCPHPLTFTL*DLLTPT
Trigger: GGTCGGAGTGAGGAGATCTCAGAGAGTGAAAGTGAG...AGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTCTCTCTTCCTTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR TCA 90 bp GGACAAGGAAGAGAGACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTGGACAGGCCAGAAGATaGGTCAGAGTCATTCTCCAC +
Preference number: 4 (lower is better)
Translates to: GQGRETWSKILCAFCPHPGQARR*VRVILH
Trigger: GTGGAGAATGACTCTGACTCATCTTCTGGCCTGTCC...AGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTCTCTCTTCCTTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR GCA 90 bp AAGGAAGAGAGACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCACTGGAAGAGGAGGCTaGTGCAGAGCTACTACTAGA +
Preference number: 4 (lower is better)
Translates to: KEERPGPRFCALSVPILATGRGG*CRATTR
Trigger: TCTAGTAGTAGCTCTGCAGCAGCCTCCTCTTCCAGT...GGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTCTCTCTTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CCA 90 bp AGGAAGAGAGACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCATCCAGTGTGGGCACCTaGAACTTTTGCAGGATCTGT +
Preference number: 4 (lower is better)
Translates to: RKRDLVQDSVRFLSPSSPSSVGT*NFCRIC
Trigger: ACAGATCCTGCAAAAGTTCCAGGTGCCCACACTGGA...TGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTCTCTCTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CCA 90 bp AGGAAGAGAGACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCAGGTGTCACAGAAGGATaGGGTTCAAAGCTAGCCTCT +
Preference number: 4 (lower is better)
Translates to: RKRDLVQDSVRFLSPSSPGVTEG*GSKLAS
Trigger: AGAGGCTAGCTTTGAACCCCATCCTTCTGTGACACC...TGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTCTCTCTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CCA 90 bp GGACAAGGAAGAGAGACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTAAGAGGAGGAAGAACTaGAAGAGGAGGCTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: GQGRETWSKILCAFCPHPKRRKN*KRRLLQ
Trigger: CTGCAGCAGCCTCCTCTTCCAGTTCTTCCTCCTCTT...AGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTCTCTCTTCCTTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CCA 90 bp GGACAAGGAAGAGAGACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTACTGACTGGCATGGCTaGGTACATCTACCACCTTGG +
Preference number: 4 (lower is better)
Translates to: GQGRETWSKILCAFCPHPTDWHG*VHLPPW
Trigger: CCAAGGTGGTAGATGTACCCAGCCATGCCAGTCAGT...AGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTCTCTCTTCCTTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CCA 90 bp GGACAAGGAAGAGAGACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTGGTGTCACAGAAGGATaGGGTTCAAAGCTAGCCTCT +
Preference number: 4 (lower is better)
Translates to: GQGRETWSKILCAFCPHPGVTEG*GSKLAS
Trigger: AGAGGCTAGCTTTGAACCCCATCCTTCTGTGACACC...AGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTCTCTCTTCCTTGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CCA 90 bp GGACAAGGAAGAGAGACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTGAGCATGATATCCAGTaGGTGTCACAGAAGGATGGG +
Preference number: 4 (lower is better)
Translates to: GQGRETWSKILCAFCPHPEHDIQ*VSQKDG
Trigger: CCCATCCTTCTGTGACACCCACTGGATATCATGCTC...AGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTCTCTCTTCCTTGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CCA 90 bp GGACAAGGAAGAGAGACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCAAGGAAGAGAGACCTaGTCCAAGATTCTGTGCGCT +
Preference number: 4 (lower is better)
Translates to: GQGRETWSKILCAFCPHPQGRET*SKILCA
Trigger: AGCGCACAGAATCTTGGACCAGGTCTCTCTTCCTTG...AGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTCTCTCTTCCTTGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR TCA 90 bp GGACAAGGAAGAGAGACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTAGGATCTGTTTTCAATaGAACCTGCTGGTAGCTCGG +
Preference number: 4 (lower is better)
Translates to: GQGRETWSKILCAFCPHPRICFQ*NLLVAR
Trigger: CCGAGCTACCAGCAGGTTTCATTGAAAACAGATCCT...AGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTCTCTCTTCCTTGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396684.3
CDS-3UTR TCA 90 bp GGACAAGGAAGAGAGACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTGCCACATCTAACAGATaGAATAATCACACCAACGGG +
Preference number: 4 (lower is better)
Translates to: GQGRETWSKILCAFCPHPATSNR*NNHTNG
Trigger: CCCGTTGGTGTGATTATTTCATCTGTTAGATGTGGC...AGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTCTCTCTTCCTTGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CCA 90 bp AGGAAGAGAGACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCATATAAATTATTAGTGTaGGGAAGGGGCAAGGGGCAT +
Preference number: 4 (lower is better)
Translates to: RKRDLVQDSVRFLSPSSPYKLLV*GRGKGH
Trigger: ATGCCCCTTGCCCCTTCCCCACACTAATAATTTATA...TGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTCTCTCTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS GCA 90 bp GAACCTGCCGGGCGTGGAAGCAGCGGGCGCTCAGGCGGTGCGAGCTaGCCGATGGAGCCCGCAGCGCCGCGGCCCCGGCGAGTGCTTGTA +
Preference number: 5 (lower is better)
Translates to: EPAGRGSSGRSGGAS*PMEPAAPRPRRVLV
Trigger: TACAAGCACTCGCCGGGGCCGCGGCGCTGCGGGCTCCATCGGGCAGCTCGCACCGCCTGAGCGCCCGCTGCTTCCACGCCCGGCAGGTTC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541029.1
CDS CCA 90 bp CAGGGGCCCAGGTCCCACGGTGGGCGAGCCCGGCTTGAAGGTCCCTaGGCCTGCAGGTGGCGAGGTTCCTCGATAGCCCGGTGGGGTCCC +
Preference number: 5 (lower is better)
Translates to: QGPRSHGGRARLEGP*ACRWRGSSIARWGP
Trigger: GGGACCCCACCGGGCTATCGAGGAACCTCGCCACCTGCAGGCCCAGGGACCTTCAAGCCGGGCTCGCCCACCGTGGGACCTGGGCCCCTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS GCA 90 bp CCCAGGTCCCACGGTGGGCGAGCCCGGCTTGAAGGTCCCTGGGCCTaGAGGTGGCGAGGTTCCTCGATAGCCCGGTGGGGTCCCCGTTCG +
Preference number: 5 (lower is better)
Translates to: PRSHGGRARLEGPWA*RWRGSSIARWGPRS
Trigger: CGAACGGGGACCCCACCGGGCTATCGAGGAACCTCGCCACCTGCAGGCCCAGGGACCTTCAAGCCGGGCTCGCCCACCGTGGGACCTGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS CCA 90 bp TCCCACGGTGGGCGAGCCCGGCTTGAAGGTCCCTGGGCCTGCAGGTaGCGAGGTTCCTCGATAGCCCGGTGGGGTCCCCGTTCGGAAGGA +
Preference number: 5 (lower is better)
Translates to: SHGGRARLEGPWACR*RGSSIARWGPRSEG
Trigger: TCCTTCCGAACGGGGACCCCACCGGGCTATCGAGGAACCTCGCCACCTGCAGGCCCAGGGACCTTCAAGCCGGGCTCGCCCACCGTGGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS CCA 90 bp GGGGGCACTGTAGCCACCGCACTGCCCGGTTCAAATGGAGGGCGATaGGGCACTGGGCCCAGAGATGGGCATTCCACCGGAGCACGGCCC +
Preference number: 5 (lower is better)
Translates to: GGTVATALPGSNGGR*GTGPRDGHSTGARP
Trigger: GGGCCGTGCTCCGGTGGAATGCCCATCTCTGGGCCCAGTGCCCCATCGCCCTCCATTTGAACCGGGCAGTGCGGTGGCTACAGTGCCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356654.8
ENST00000396684.3
ENST00000541029.1
CDS CCA 90 bp GAAGGTCCCTGGGCCTGCAGGTGGCGAGGTTCCTCGATAGCCCGGTaGGGTCCCCGTTCGGAAGGAGGGAGGCGACCCGGGTTTGTATCC +
Preference number: 5 (lower is better)
Translates to: EGPWACRWRGSSIAR*GPRSEGGRRPGFVS
Trigger: GGATACAAACCCGGGTCGCCTCCCTCCTTCCGAACGGGGACCCCACCGGGCTATCGAGGAACCTCGCCACCTGCAGGCCCAGGGACCTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS TCA 90 bp GGCACTGGGCCCAGAGATGGGCATTCCACCGGAGCACGGCCCTCCTaGGCCAACTTCACGCTGCGTTCAAGCTCGCGCTCCTTCTCGCGC +
Preference number: 5 (lower is better)
Translates to: GTGPRDGHSTGARPS*ANFTLRSSSRSFSR
Trigger: GCGCGAGAAGGAGCGCGAGCTTGAACGCAGCGTGAAGTTGGCTCAGGAGGGCCGTGCTCCGGTGGAATGCCCATCTCTGGGCCCAGTGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356654.8
ENST00000396684.3
ENST00000541029.1
CDS GCA 90 bp CTGCAGCCGGGCCAGTGGGTCATTGCCCAGGGCCGCCACCCTTTCTaGGTGCTGCCTCTCAGCTGCCAGCCGCTCAGCATAGGACATGTC +
Preference number: 5 (lower is better)
Translates to: LQPGQWVIAQGRHPF*VLPLSCQPLSIGHV
Trigger: GACATGTCCTATGCTGAGCGGCTGGCAGCTGAGAGGCAGCACGCAGAAAGGGTGGCGGCCCTGGGCAATGACCCACTGGCCCGGCTGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS CCA 90 bp TGTAGCCACCGCACTGCCCGGTTCAAATGGAGGGCGATGGGGCACTaGGCCCAGAGATGGGCATTCCACCGGAGCACGGCCCTCCTGAGC +
Preference number: 5 (lower is better)
Translates to: CSHRTARFKWRAMGH*AQRWAFHRSTALLS
Trigger: GCTCAGGAGGGCCGTGCTCCGGTGGAATGCCCATCTCTGGGCCCAGTGCCCCATCGCCCTCCATTTGAACCGGGCAGTGCGGTGGCTACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356654.8
ENST00000396684.3
ENST00000541029.1
CDS GCA 90 bp CTCGTTCACGGGCTTCCCGTTCCCTCTCCCGGGCAGCTGGATCACTaGTGTACAGGGCCGGGACATTGTAACCCAGGAGCCCCGGGTCCA +
Preference number: 5 (lower is better)
Translates to: LVHGLPVPSPGQLDH*CTGPGHCNPGAPGP
Trigger: TGGACCCGGGGCTCCTGGGTTACAATGTCCCGGCCCTGTACAGCAGTGATCCAGCTGCCCGGGAGAGGGAACGGGAAGCCCGTGAACGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356654.8
ENST00000396684.3
ENST00000541029.1
CDS-3UTR CAA 90 bp GACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCACCTCCCCACAGGGTAGGGCGCCCCTaGAGGGCCCTGGGAAGGGGA +
Preference number: 5 (lower is better)
Translates to: DLVQDSVRFLSPSSPPPHRVGRP*RALGRG
Trigger: TCCCCTTCCCAGGGCCCTCAAGGGGCGCCCTACCCT...GTGGGGAGGTGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CAA 90 bp ACTCTCTGTCCAGCTGCGGAGGCCCTGCAACTGAGCAGCACCCTCTTGGCTCTGAGGTCGGCCCGCTTCTaGGCCAGCTTGGAGCCCTCC +
Preference number: 5 (lower is better)
Translates to: TLCPAAEALQLSSTLLALRSARF*ASLEPS
Trigger: GGAGGGCTCCAAGCTGGCCAAGAAGCGGGCCGACCT...CAGAGCCAAGAGGGTGCTGCTCAGTTGCAGGGCCTCCGCAGCTGGACAGAGAGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CAA 90 bp ATCCTCGCCACCTCCCCACCTCTGCACACCACATCGGGCCTTGGCCTTCTGTCTAGGTCGGCCCGCTTCTaGGCCAGCTTGGAGCCCTCC +
Preference number: 5 (lower is better)
Translates to: ILATSPPLHTTSGLGLLSRSARF*ASLEPS
Trigger: GGAGGGCTCCAAGCTGGCCAAGAAGCGGGCCGACCT...AGACAGAAGGCCAAGGCCCGATGTGGTGTGCAGAGGTGGGGAGGTGGCGAGGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS TCA 90 bp AGGGAGAGTTCCAGCTGGGTAGGGGATCCGGGTAAGGTGAGACCCTaGGGCCAGGGGGTCAATGAGAGGGTGCACCGAGGCAGAGGCTGC +
Preference number: 5 (lower is better)
Translates to: RESSSWVGDPGKVRP*GQGVNERVHRGRGC
Trigger: GCAGCCTCTGCCTCGGTGCACCCTCTCATTGACCCCCTGGCCTCAGGGTCTCACCTTACCCGGATCCCCTACCCAGCTGGAACTCTCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356654.8
ENST00000396684.3
ENST00000537488.1
CDS GCA 90 bp ATGGGCATTCCACCGGAGCACGGCCCTCCTGAGCCAACTTCACGCTaGGTTCAAGCTCGCGCTCCTTCTCGCGCTCGCGCTCTTTCTCGC +
Preference number: 5 (lower is better)
Translates to: MGIPPEHGPPEPTSR*VQARAPSRARALSR
Trigger: GCGAGAAAGAGCGCGAGCGCGAGAAGGAGCGCGAGCTTGAACGCAGCGTGAAGTTGGCTCAGGAGGGCCGTGCTCCGGTGGAATGCCCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356654.8
ENST00000396684.3
ENST00000541029.1
CDS CCA 90 bp ACTGCCCGGTTCAAATGGAGGGCGATGGGGCACTGGGCCCAGAGATaGGCATTCCACCGGAGCACGGCCCTCCTGAGCCAACTTCACGCT +
Preference number: 5 (lower is better)
Translates to: TARFKWRAMGHWAQR*AFHRSTALLSQLHA
Trigger: AGCGTGAAGTTGGCTCAGGAGGGCCGTGCTCCGGTGGAATGCCCATCTCTGGGCCCAGTGCCCCATCGCCCTCCATTTGAACCGGGCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356654.8
ENST00000396684.3
ENST00000541029.1
CDS CCA 90 bp ACGGAGGTCTCGTTCACGGGCTTCCCGTTCCCTCTCCCGGGCAGCTaGATCACTGCTGTACAGGGCCGGGACATTGTAACCCAGGAGCCC +
Preference number: 5 (lower is better)
Translates to: TEVSFTGFPFPLPGS*ITAVQGRDIVTQEP
Trigger: GGGCTCCTGGGTTACAATGTCCCGGCCCTGTACAGCAGTGATCCAGCTGCCCGGGAGAGGGAACGGGAAGCCCGTGAACGAGACCTCCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356654.8
ENST00000396684.3
ENST00000541029.1
CDS CCA 90 bp CTGGTGGTGATGGGGAGTCACATTGAGCATCTGCAGCCGGGCCAGTaGGTCATTGCCCAGGGCCGCCACCCTTTCTGCGTGCTGCCTCTC +
Preference number: 5 (lower is better)
Translates to: LVVMGSHIEHLQPGQ*VIAQGRHPFCVLPL
Trigger: GAGAGGCAGCACGCAGAAAGGGTGGCGGCCCTGGGCAATGACCCACTGGCCCGGCTGCAGATGCTCAATGTGACTCCCCATCACCACCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CAA 90 bp GACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCACCTCCCCACGGAGGCGACCCGGGTTaGTATCCGGGTGGGGTGGCT +
Preference number: 5 (lower is better)
Translates to: DLVQDSVRFLSPSSPPPHGGDPG*YPGGVA
Trigger: AGCCACCCCACCCGGATACAAACCCGGGTCGCCTCC...GTGGGGAGGTGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CAA 90 bp CCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCACCTCCCCACCTGGAGGCGACCCGGGTTaGTATCCGGGTGGGGTGGCT +
Preference number: 5 (lower is better)
Translates to: PGPRFCALSVPILATSPPGGDPG*YPGGVA
Trigger: AGCCACCCCACCCGGATACAAACCCGGGTCGCCTCC...AGGTGGGGAGGTGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CAA 90 bp ACTCTCTGTCCAGCTGCGGAGGCCCTGCAACTGAGCAGCACCCTCTTGGCTCTGCGCTTCTTGGCCAGCTaGGAGCCCTCCAGTGGCACG +
Preference number: 5 (lower is better)
Translates to: TLCPAAEALQLSSTLLALRFLAS*EPSSGT
Trigger: CGTGCCACTGGAGGGCTCCAAGCTGGCCAAGAAGCG...CAGAGCCAAGAGGGTGCTGCTCAGTTGCAGGGCCTCCGCAGCTGGACAGAGAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CAA 90 bp ACTCTCTGTCCAGCTGCGGAGGCCCTGCAACTGAGCAGCACCCTCTTGGCTCTGGTGAAGGAGCCAGAGTaGGGCCCTTCTCTGGGCCAG +
Preference number: 5 (lower is better)
Translates to: TLCPAAEALQLSSTLLALVKEPE*GPSLGQ
Trigger: CTGGCCCAGAGAAGGGCCCAACTCTGGCTCCTTCAC...CAGAGCCAAGAGGGTGCTGCTCAGTTGCAGGGCCTCCGCAGCTGGACAGAGAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CAA 90 bp ACTCTCTGTCCAGCTGCGGAGGCCCTGCAACTGAGCAGCACCCTCTTGGCTCTGGGGCCTGGATGGGCATaGCTGTTGGCTAAGAGGCGG +
Preference number: 5 (lower is better)
Translates to: TLCPAAEALQLSSTLLALGPGWA*LLAKRR
Trigger: CCGCCTCTTAGCCAACAGCAATGCCCATCCAGGCCC...CAGAGCCAAGAGGGTGCTGCTCAGTTGCAGGGCCTCCGCAGCTGGACAGAGAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CAA 90 bp ATCCTCGCCACCTCCCCACCTCTGCACACCACATCGGGCCTTGGCCTTCTGTCTTCAGCCGGCTCCTGTTaGATCTGCGTGGCGCTCAGG +
Preference number: 5 (lower is better)
Translates to: ILATSPPLHTTSGLGLLSSAGSC*ICVALR
Trigger: CCTGAGCGCCACGCAGATCAAACAGGAGCCGGCTGA...AGACAGAAGGCCAAGGCCCGATGTGGTGTGCAGAGGTGGGGAGGTGGCGAGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CAA 90 bp GACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCACCTCCCCACCTGCGCGCGCACGAGTaGAAGCCGCGATCCAGGTGT +
Preference number: 5 (lower is better)
Translates to: DLVQDSVRFLSPSSPPPHLRAHE*KPRSRC
Trigger: ACACCTGGATCGCGGCTTCAACTCGTGCGCGCGCAG...GTGGGGAGGTGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CAA 90 bp CCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCACCTCCCCACCTCTGCGCGCGCACGAGTaGAAGCCGCGATCCAGGTGT +
Preference number: 5 (lower is better)
Translates to: PGPRFCALSVPILATSPPLRAHE*KPRSRC
Trigger: ACACCTGGATCGCGGCTTCAACTCGTGCGCGCGCAG...AGGTGGGGAGGTGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CAA 90 bp GACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCACCTCCCCACCGCTTCTTGGCCAGCTaGGAGCCCTCCAGTGGCACG +
Preference number: 5 (lower is better)
Translates to: DLVQDSVRFLSPSSPPPHRFLAS*EPSSGT
Trigger: CGTGCCACTGGAGGGCTCCAAGCTGGCCAAGAAGCG...GTGGGGAGGTGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CAA 90 bp GACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCACCTCCCCACGGCAAGGGGCATACATaGCAGAGGGGGCGCGCACAC +
Preference number: 5 (lower is better)
Translates to: DLVQDSVRFLSPSSPPPHGKGHT*QRGRAH
Trigger: GTGTGCGCGCCCCCTCTGCAATGTATGCCCCTTGCC...GTGGGGAGGTGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS CCA 90 bp GAGGCCAGGGGGTCAATGAGAGGGTGCACCGAGGCAGAGGCTGCATaGATAGCATCTTGCTGGTGCAGGTGCAGGTGCGAGTGGATGTGG +
Preference number: 5 (lower is better)
Translates to: EARGSMRGCTEAEAA*IASCWCRCRCEWMW
Trigger: CCACATCCACTCGCACCTGCACCTGCACCAGCAAGATGCTATCCATGCAGCCTCTGCCTCGGTGCACCCTCTCATTGACCCCCTGGCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356654.8
ENST00000396684.3
ENST00000537488.1
CDS-3UTR CAA 90 bp GACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCACCTCCCCACGTGAAGGAGCCAGAGTaGGGCCCTTCTCTGGGCCAG +
Preference number: 5 (lower is better)
Translates to: DLVQDSVRFLSPSSPPPHVKEPE*GPSLGQ
Trigger: CTGGCCCAGAGAAGGGCCCAACTCTGGCTCCTTCAC...GTGGGGAGGTGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CAA 90 bp GACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCACCTCCCCACGGGCCTGGATGGGCATaGCTGTTGGCTAAGAGGCGG +
Preference number: 5 (lower is better)
Translates to: DLVQDSVRFLSPSSPPPHGPGWA*LLAKRR
Trigger: CCGCCTCTTAGCCAACAGCAATGCCCATCCAGGCCC...GTGGGGAGGTGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CAA 90 bp AAGGAAGAGAGACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCAGGGTAGGGCGCCCCTaGAGGGCCCTGGGAAGGGGA +
Preference number: 5 (lower is better)
Translates to: KEERPGPRFCALSVPILARVGRP*RALGRG
Trigger: TCCCCTTCCCAGGGCCCTCAAGGGGCGCCCTACCCT...GGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTCTCTCTTCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CAA 90 bp ACTCTCTGTCCAGCTGCGGAGGCCCTGCAACTGAGCAGCACCCTCTTGGCTCTGACACCACATCGGGCCTaGGCCTTCTGTCTGTCCCTC +
Preference number: 5 (lower is better)
Translates to: TLCPAAEALQLSSTLLALTPHRA*AFCLSL
Trigger: GAGGGACAGACAGAAGGCCAAGGCCCGATGTGGTGT...CAGAGCCAAGAGGGTGCTGCTCAGTTGCAGGGCCTCCGCAGCTGGACAGAGAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CAA 90 bp ACTCTCTGTCCAGCTGCGGAGGCCCTGCAACTGAGCAGCACCCTCTTGGCTCTGGGAGAGGCTGATGCATaGTTGAGGGGTCTCAGGGCA +
Preference number: 5 (lower is better)
Translates to: TLCPAAEALQLSSTLLALGEADA*LRGLRA
Trigger: TGCCCTGAGACCCCTCAACAATGCATCAGCCTCTCC...CAGAGCCAAGAGGGTGCTGCTCAGTTGCAGGGCCTCCGCAGCTGGACAGAGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CAA 90 bp CCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCACCTCCCCACCTTCTACTCGGGCCTTCTaGGCTGTCTGCCTGGACTTC +
Preference number: 5 (lower is better)
Translates to: PGPRFCALSVPILATSPPSTRAF*AVCLDF
Trigger: GAAGTCCAGGCAGACAGCCAAGAAGGCCCGAGTAGA...AGGTGGGGAGGTGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CAA 90 bp GACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCACCTCCCCACTCACTCCGACCCTGCTaGTTGACCTTTGGGGTGGAG +
Preference number: 5 (lower is better)
Translates to: DLVQDSVRFLSPSSPPPHSLRPC*LTFGVE
Trigger: CTCCACCCCAAAGGTCAACAAGCAGGGTCGGAGTGA...GTGGGGAGGTGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CAA 90 bp ATCCTCGCCACCTCCCCACCTCTGCACACCACATCGGGCCTTGGCCTTCTGTCTTGCATGGATAGCATCTaGCTGGTGCAGGTGCAGGTG +
Preference number: 5 (lower is better)
Translates to: ILATSPPLHTTSGLGLLSCMDSI*LVQVQV
Trigger: CACCTGCACCTGCACCAGCAAGATGCTATCCATGCA...AGACAGAAGGCCAAGGCCCGATGTGGTGTGCAGAGGTGGGGAGGTGGCGAGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CAA 90 bp AGGAAGAGAGACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCAGGCAAGGGGCATACATaGCAGAGGGGGCGCGCACAC +
Preference number: 5 (lower is better)
Translates to: RKRDLVQDSVRFLSPSSPGKGHT*QRGRAH
Trigger: GTGTGCGCGCCCCCTCTGCAATGTATGCCCCTTGCC...TGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTCTCTCTTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CAA 90 bp AGGAAGAGAGACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCACCGCAGGGGACAGCCTaGAAGTTCCTCCCACTTGGC +
Preference number: 5 (lower is better)
Translates to: RKRDLVQDSVRFLSPSSPPQGTA*KFLPLG
Trigger: GCCAAGTGGGAGGAACTTCAAGGCTGTCCCCTGCGG...TGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTCTCTCTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356654.8
CDS-3UTR CAA 90 bp ACTCTCTGTCCAGCTGCGGAGGCCCTGCAACTGAGCAGCACCCTCTTGGCTCTGAGCCATGGTGCTCTCTaGATCGCAGGTTCTACAGTG +
Preference number: 5 (lower is better)
Translates to: TLCPAAEALQLSSTLLALSHGAL*IAGSTV
Trigger: CACTGTAGAACCTGCGATCAAGAGAGCACCATGGCT...CAGAGCCAAGAGGGTGCTGCTCAGTTGCAGGGCCTCCGCAGCTGGACAGAGAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CAA 90 bp AGGAAGAGAGACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCAGGTGCTGTCTGGCGGTaGAGGGGAAGGAGGAAAGAG +
Preference number: 5 (lower is better)
Translates to: RKRDLVQDSVRFLSPSSPGAVWR*RGRRKE
Trigger: CTCTTTCCTCCTTCCCCTCAACCGCCAGACAGCACC...TGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTCTCTCTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CAA 90 bp CCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCACCTCCCCACCTAGCCATGGTGCTCTCTaGATCGCAGGTTCTACAGTG +
Preference number: 5 (lower is better)
Translates to: PGPRFCALSVPILATSPPSHGAL*IAGSTV
Trigger: CACTGTAGAACCTGCGATCAAGAGAGCACCATGGCT...AGGTGGGGAGGTGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CAA 90 bp AGGAAGAGAGACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCAACACCACATCGGGCCTaGGCCTTCTGTCTGTCCCTC +
Preference number: 5 (lower is better)
Translates to: RKRDLVQDSVRFLSPSSPTPHRA*AFCLSL
Trigger: GAGGGACAGACAGAAGGCCAAGGCCCGATGTGGTGT...TGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTCTCTCTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS TCA 90 bp CCTCACTTTCACTCTCTGAGATCTCCTCACTCCGACCCTGCTTGTTaGCCTTTGGGGTGGAGGCTTCCTCTACTCGGGCCTTCTTGGCTG +
Preference number: 5 (lower is better)
Translates to: PHFHSLRSPHSDPAC*PLGWRLPLLGPSWL
Trigger: CAGCCAAGAAGGCCCGAGTAGAGGAAGCCTCCACCCCAAAGGTCAACAAGCAGGGTCGGAGTGAGGAGATCTCAGAGAGTGAAAGTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CAA 90 bp AGGAAGAGAGACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCATCACTCCGACCCTGCTaGTTGACCTTTGGGGTGGAG +
Preference number: 5 (lower is better)
Translates to: RKRDLVQDSVRFLSPSSPSLRPC*LTFGVE
Trigger: CTCCACCCCAAAGGTCAACAAGCAGGGTCGGAGTGA...TGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTCTCTCTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CAA 90 bp AAGGAAGAGAGACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCGGAGAGGCTGATGCATaGTTGAGGGGTCTCAGGGCA +
Preference number: 5 (lower is better)
Translates to: KEERPGPRFCALSVPILAGEADA*LRGLRA
Trigger: TGCCCTGAGACCCCTCAACAATGCATCAGCCTCTCC...GGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTCTCTCTTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS GCA 90 bp TTGGTCTCCTCACTTTCACTCTCTGAGATCTCCTCACTCCGACCCTaGTTGTTGACCTTTGGGGTGGAGGCTTCCTCTACTCGGGCCTTC +
Preference number: 5 (lower is better)
Translates to: LVSSLSLSEISSLRP*LLTFGVEASSTRAF
Trigger: GAAGGCCCGAGTAGAGGAAGCCTCCACCCCAAAGGTCAACAAGCAGGGTCGGAGTGAGGAGATCTCAGAGAGTGAAAGTGAGGAGACCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CAA 90 bp ACTCTCTGTCCAGCTGCGGAGGCCCTGCAACTGAGCAGCACCCTCTTGGCTCTGTCCGTCCACTCCTCATaGACATCGAGTCTTTATTCT +
Preference number: 5 (lower is better)
Translates to: TLCPAAEALQLSSTLLALSVHSS*TSSLYS
Trigger: AGAATAAAGACTCGATGTCAATGAGGAGTGGACGGA...CAGAGCCAAGAGGGTGCTGCTCAGTTGCAGGGCCTCCGCAGCTGGACAGAGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CAA 90 bp AAGGAAGAGAGACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCCTGGACTTCTCAGCTTaGCCATCACTGCTGGACGTG +
Preference number: 5 (lower is better)
Translates to: KEERPGPRFCALSVPILALDFSA*PSLLDV
Trigger: CACGTCCAGCAGTGATGGCAAAGCTGAGAAGTCCAG...GGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTCTCTCTTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS CCA 90 bp CGTGTCTTCATTCTTCAGGCTGTGGAGACCCCATTCTCCTCTGCCTaGGCAGCTGAATACAGAAACTTCTCTGCTCCACCCCAAGTTCCC +
Preference number: 5 (lower is better)
Translates to: RVFILQAVETPFSSA*AAEYRNFSAPPQVP
Trigger: GGGAACTTGGGGTGGAGCAGAGAAGTTTCTGTATTCAGCTGCCCAGGCAGAGGAGAATGGGGTCTCCACAGCCTGAAGAATGAAGACACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CAA 90 bp CCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCACCTCCCCACCTTCCGTCCACTCCTCATaGACATCGAGTCTTTATTCT +
Preference number: 5 (lower is better)
Translates to: PGPRFCALSVPILATSPPSVHSS*TSSLYS
Trigger: AGAATAAAGACTCGATGTCAATGAGGAGTGGACGGA...AGGTGGGGAGGTGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CAA 90 bp CCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCGCCACCTCCCCACCTCAGTTTTGGTCTTTTTaGGTGCATTGGTCTCCTCAC +
Preference number: 5 (lower is better)
Translates to: PGPRFCALSVPILATSPPQFWSF*VHWSPH
Trigger: GTGAGGAGACCAATGCACCAAAAAAGACCAAAACTG...AGGTGGGGAGGTGGCGAGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CAA 90 bp GGACAAGGAAGAGAGACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTTGCATGGATAGCATCTaGCTGGTGCAGGTGCAGGTG +
Preference number: 5 (lower is better)
Translates to: GQGRETWSKILCAFCPHPCMDSI*LVQVQV
Trigger: CACCTGCACCTGCACCAGCAAGATGCTATCCATGCA...AGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTCTCTCTTCCTTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS-3UTR CAA 90 bp GGACAAGGAAGAGAGACCTGGTCCAAGATTCTGTGCGCTTTCTGTCCCCATCCTCAGTTTTGGTCTTTTTaGGTGCATTGGTCTCCTCAC +
Preference number: 5 (lower is better)
Translates to: GQGRETWSKILCAFCPHPQFWSF*VHWSPH
Trigger: GTGAGGAGACCAATGCACCAAAAAAGACCAAAACTG...AGGATGGGGACAGAAAGCGCACAGAATCTTGGACCAGGTCTCTCTTCCTTGTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS CCA 90 bp TTGACATCGAGTCTTTATTCTGTCGTGTCTTCATTCTTCAGGCTGTaGAGACCCCATTCTCCTCTGCCTGGGCAGCTGAATACAGAAACT +
Preference number: 5 (lower is better)
Translates to: LTSSLYSVVSSFFRL*RPHSPLPGQLNTET
Trigger: AGTTTCTGTATTCAGCTGCCCAGGCAGAGGAGAATGGGGTCTCCACAGCCTGAAGAATGAAGACACGACAGAATAAAGACTCGATGTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS GCA 72 bp ACCTGCCGGGCGTGGAAGCAGCGGGCGCTCAGGCGGTaGGAGCTGCCCGATGGAGCCCGCAGCGCCGCGGCC +
Preference number: 6 (lower is better)
Translates to: TCRAWKQRALRR*ELPDGARSAAA
Trigger: GGCCGCGGCGCTGCGGGCTCCATCGGGCAGCTCGCACCGCCTGAGCGCCCGCTGCTTCCACGCCCGGCAGGT
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541029.1
CDS TCA 72 bp GCAGGGGCCCAGGTCCCACGGTGGGCGAGCCCGGCTTaGAGGTCCCTGGGCCTGCAGGTGGCGAGGTTCCTC +
Preference number: 6 (lower is better)
Translates to: AGAQVPRWASPA*RSLGLQVARFL
Trigger: GAGGAACCTCGCCACCTGCAGGCCCAGGGACCTTCAAGCCGGGCTCGCCCACCGTGGGACCTGGGCCCCTGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS GCA 72 bp CGCTCGCGCTCGCGCTCCTTTTCTTCGCGCGCGCGCTaGTCGGCCTCGCGCCGCACCTTCTCCACCAGGTCG +
Preference number: 6 (lower is better)
Translates to: RSRSRSFSSRAR*SASRRTFSTRS
Trigger: CGACCTGGTGGAGAAGGTGCGGCGCGAGGCCGAGCAGCGCGCGCGCGAAGAAAAGGAGCGCGAGCGCGAGCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356654.8
ENST00000396684.3
ENST00000541029.1
CDS CCA 72 bp TGGGCCTGCAGGTGGCGAGGTTCCTCGATAGCCCGGTaGGGTCCCCGTTCGGAAGGAGGGAGGCGACCCGGG +
Preference number: 6 (lower is better)
Translates to: WACRWRGSSIAR*GPRSEGGRRPG
Trigger: CCCGGGTCGCCTCCCTCCTTCCGAACGGGGACCCCACCGGGCTATCGAGGAACCTCGCCACCTGCAGGCCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS CCA 72 bp GGGCGAGCCCGGCTTGAAGGTCCCTGGGCCTGCAGGTaGCGAGGTTCCTCGATAGCCCGGTGGGGTCCCCGT +
Preference number: 6 (lower is better)
Translates to: GRARLEGPWACR*RGSSIARWGPR
Trigger: ACGGGGACCCCACCGGGCTATCGAGGAACCTCGCCACCTGCAGGCCCAGGGACCTTCAAGCCGGGCTCGCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS GCA 72 bp CACGGTGGGCGAGCCCGGCTTGAAGGTCCCTGGGCCTaGAGGTGGCGAGGTTCCTCGATAGCCCGGTGGGGT +
Preference number: 6 (lower is better)
Translates to: HGGRARLEGPWA*RWRGSSIARWG
Trigger: ACCCCACCGGGCTATCGAGGAACCTCGCCACCTGCAGGCCCAGGGACCTTCAAGCCGGGCTCGCCCACCGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS CCA 72 bp AGGTCCCACGGTGGGCGAGCCCGGCTTGAAGGTCCCTaGGCCTGCAGGTGGCGAGGTTCCTCGATAGCCCGG +
Preference number: 6 (lower is better)
Translates to: RSHGGRARLEGP*ACRWRGSSIAR
Trigger: CCGGGCTATCGAGGAACCTCGCCACCTGCAGGCCCAGGGACCTTCAAGCCGGGCTCGCCCACCGTGGGACCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS TCA 72 bp TCCTCCTGGGCAGGCAGCGGCACACTGTGCAGCGGGTaGTGGGCATGCAGCCACTGCTGCTGTTCCAGCGCC +
Preference number: 6 (lower is better)
Translates to: SSWAGSGTLCSG*WACSHCCCSSA
Trigger: GGCGCTGGAACAGCAGCAGTGGCTGCATGCCCATCACCCGCTGCACAGTGTGCCGCTGCCTGCCCAGGAGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356654.8
ENST00000396684.3
ENST00000537488.1
CDS GCA 72 bp CCACCGGAGCACGGCCCTCCTGAGCCAACTTCACGCTaGGTTCAAGCTCGCGCTCCTTCTCGCGCTCGCGCT +
Preference number: 6 (lower is better)
Translates to: PPEHGPPEPTSR*VQARAPSRARA
Trigger: AGCGCGAGCGCGAGAAGGAGCGCGAGCTTGAACGCAGCGTGAAGTTGGCTCAGGAGGGCCGTGCTCCGGTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356654.8
ENST00000396684.3
ENST00000541029.1
CDS GCA 72 bp TTCCCTCCCCCAGGAGCACGGTGCCCAGCCGTACCATaGCCACAGCTCCTCCCAGGCTCGCTGAGCCCATGT +
Preference number: 6 (lower is better)
Translates to: FPPPGARCPAVP*PQLLPGSLSPC
Trigger: ACATGGGCTCAGCGAGCCTGGGAGGAGCTGTGGGCATGGTACGGCTGGGCACCGTGCTCCTGGGGGAGGGAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537488.1
CDS CCA 72 bp CGCACTGCCCGGTTCAAATGGAGGGCGATGGGGCACTaGGCCCAGAGATGGGCATTCCACCGGAGCACGGCC +
Preference number: 6 (lower is better)
Translates to: RTARFKWRAMGH*AQRWAFHRSTA
Trigger: GGCCGTGCTCCGGTGGAATGCCCATCTCTGGGCCCAGTGCCCCATCGCCCTCCATTTGAACCGGGCAGTGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356654.8
ENST00000396684.3
ENST00000541029.1
CDS CAA 90 bp TACAGGTCGCTGCGCGCGCACGAGTTGAAGCCGCGATCCAGGTGTTaGTTGAACCTGCCGGGCGTGGAAGCAGCGGGCGCTCAGGCGGTG +
Preference number: 6 (lower is better)
Translates to: YRSLRAHELKPRSRC*LNLPGVEAAGAQAV
Trigger: CACCGCCTGAGCGCCCGCTGCTTCCACGCCCGGCAGGTTCAACAAACACCTGGATCGCGGCTTCAACTCGTGCGCGCGCAGCGACCTGTA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541029.1
CDS CAA 72 bp CTGCGCGCGCACGAGTTGAAGCCGCGATCCAGGTGTTaGTTGAACCTGCCGGGCGTGGAAGCAGCGGGCGCT +
Preference number: 6 (lower is better)
Translates to: LRAHELKPRSRC*LNLPGVEAAGA
Trigger: AGCGCCCGCTGCTTCCACGCCCGGCAGGTTCAACAAACACCTGGATCGCGGCTTCAACTCGTGCGCGCGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541029.1
CDS TCA 72 bp CCCAGAGATGGGCATTCCACCGGAGCACGGCCCTCCTaGGCCAACTTCACGCTGCGTTCAAGCTCGCGCTCC +
Preference number: 6 (lower is better)
Translates to: PRDGHSTGARPS*ANFTLRSSSRS
Trigger: GGAGCGCGAGCTTGAACGCAGCGTGAAGTTGGCTCAGGAGGGCCGTGCTCCGGTGGAATGCCCATCTCTGGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356654.8
ENST00000396684.3
ENST00000541029.1
CDS TCA 72 bp TCCAGCTGGGTAGGGGATCCGGGTAAGGTGAGACCCTaGGGCCAGGGGGTCAATGAGAGGGTGCACCGAGGC +
Preference number: 6 (lower is better)
Translates to: SSWVGDPGKVRP*GQGVNERVHRG
Trigger: GCCTCGGTGCACCCTCTCATTGACCCCCTGGCCTCAGGGTCTCACCTTACCCGGATCCCCTACCCAGCTGGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356654.8
ENST00000396684.3
ENST00000537488.1
CDS CCA 72 bp GTAGCCACCGCACTGCCCGGTTCAAATGGAGGGCGATaGGGCACTGGGCCCAGAGATGGGCATTCCACCGGA +
Preference number: 6 (lower is better)
Translates to: VATALPGSNGGR*GTGPRDGHSTG
Trigger: TCCGGTGGAATGCCCATCTCTGGGCCCAGTGCCCCATCGCCCTCCATTTGAACCGGGCAGTGCGGTGGCTAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356654.8
ENST00000396684.3
ENST00000541029.1
CDS CCA 72 bp ATGGGGAGTCACATTGAGCATCTGCAGCCGGGCCAGTaGGTCATTGCCCAGGGCCGCCACCCTTTCTGCGTG +
Preference number: 6 (lower is better)
Translates to: MGSHIEHLQPGQ*VIAQGRHPFCV
Trigger: CACGCAGAAAGGGTGGCGGCCCTGGGCAATGACCCACTGGCCCGGCTGCAGATGCTCAATGTGACTCCCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS CAA 90 bp TCCTCTACTCGGGCCTTCTTGGCTGTCTGCCTGGACTTCTCAGCTTaGCCATCACTGCTGGACGTGCTGACCCCTCCAGGGGAGGCCCGG +
Preference number: 6 (lower is better)
Translates to: SSTRAFLAVCLDFSA*PSLLDVLTPPGEAR
Trigger: CCGGGCCTCCCCTGGAGGGGTCAGCACGTCCAGCAGTGATGGCAAAGCTGAGAAGTCCAGGCAGACAGCCAAGAAGGCCCGAGTAGAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS CCA 72 bp GGGTCAATGAGAGGGTGCACCGAGGCAGAGGCTGCATaGATAGCATCTTGCTGGTGCAGGTGCAGGTGCGAG +
Preference number: 6 (lower is better)
Translates to: GSMRGCTEAEAA*IASCWCRCRCE
Trigger: CTCGCACCTGCACCTGCACCAGCAAGATGCTATCCATGCAGCCTCTGCCTCGGTGCACCCTCTCATTGACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356654.8
ENST00000396684.3
ENST00000537488.1
CDS CAA 90 bp GTCAATGAGAGGGTGCACCGAGGCAGAGGCTGCATGGATAGCATCTaGCTGGTGCAGGTGCAGGTGCGAGTGGATGTGGGAGTGCTGGTG +
Preference number: 6 (lower is better)
Translates to: VNERVHRGRGCMDSI*LVQVQVRVDVGVLV
Trigger: CACCAGCACTCCCACATCCACTCGCACCTGCACCTGCACCAGCAAGATGCTATCCATGCAGCCTCTGCCTCGGTGCACCCTCTCATTGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356654.8
ENST00000396684.3
ENST00000537488.1
CDS CCA 72 bp TTCAAAGCTAGCCTCTGGCTGTCGAGGGGTGCTGTCTaGCGGTTGAGGGGAAGGAGGAAAGAGTGGAGGTGG +
Preference number: 6 (lower is better)
Translates to: FKASLWLSRGAV*RLRGRRKEWRW
Trigger: CCACCTCCACTCTTTCCTCCTTCCCCTCAACCGCCAGACAGCACCCCTCGACAGCCAGAGGCTAGCTTTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS TCA 72 bp CACTCTCTGAGATCTCCTCACTCCGACCCTGCTTGTTaGCCTTTGGGGTGGAGGCTTCCTCTACTCGGGCCT +
Preference number: 6 (lower is better)
Translates to: HSLRSPHSDPAC*PLGWRLPLLGP
Trigger: AGGCCCGAGTAGAGGAAGCCTCCACCCCAAAGGTCAACAAGCAGGGTCGGAGTGAGGAGATCTCAGAGAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS CCA 72 bp AGGCTTCCTCTACTCGGGCCTTCTTGGCTGTCTGCCTaGACTTCTCAGCTTTGCCATCACTGCTGGACGTGC +
Preference number: 6 (lower is better)
Translates to: RLPLLGPSWLSA*TSQLCHHCWTC
Trigger: GCACGTCCAGCAGTGATGGCAAAGCTGAGAAGTCCAGGCAGACAGCCAAGAAGGCCCGAGTAGAGGAAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS CCA 72 bp CCGCCCGTCCAAGCTATCCAGATCGGAGGGAGACTGTaGCCGAGGGAGTTCCTGCTCAGTTTTGGTCTTTTT +
Preference number: 6 (lower is better)
Translates to: PPVQAIQIGGRL*PREFLLSFGLF
Trigger: AAAAAGACCAAAACTGAGCAGGAACTCCCTCGGCCACAGTCTCCCTCCGATCTGGATAGCTTGGACGGGCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS CAA 90 bp GTCTCCTCACTTTCACTCTCTGAGATCTCCTCACTCCGACCCTGCTaGTTGACCTTTGGGGTGGAGGCTTCCTCTACTCGGGCCTTCTTG +
Preference number: 6 (lower is better)
Translates to: VSSLSLSEISSLRPC*LTFGVEASSTRAFL
Trigger: CAAGAAGGCCCGAGTAGAGGAAGCCTCCACCCCAAAGGTCAACAAGCAGGGTCGGAGTGAGGAGATCTCAGAGAGTGAAAGTGAGGAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS CAA 90 bp GGGTGGGGGTGCTCCAAGGTCCAATGTAGGAGCCATGGTGCTCTCTaGATCGCAGGTTCTACAGTGGCTTGTCGCTTTCCTTCTTCAGGT +
Preference number: 6 (lower is better)
Translates to: GWGCSKVQCRSHGAL*IAGSTVACRFPSSG
Trigger: ACCTGAAGAAGGAAAGCGACAAGCCACTGTAGAACCTGCGATCAAGAGAGCACCATGGCTCCTACATTGGACCTTGGAGCACCCCCACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356654.8
ENST00000396684.3
ENST00000537488.1
CDS CAA 72 bp CTTTCACTCTCTGAGATCTCCTCACTCCGACCCTGCTaGTTGACCTTTGGGGTGGAGGCTTCCTCTACTCGG +
Preference number: 6 (lower is better)
Translates to: LSLSEISSLRPC*LTFGVEASSTR
Trigger: CCGAGTAGAGGAAGCCTCCACCCCAAAGGTCAACAAGCAGGGTCGGAGTGAGGAGATCTCAGAGAGTGAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS TCA 72 bp GCTCCAAGGTCCAATGTAGGAGCCATGGTGCTCTCTTaGTCGCAGGTTCTACAGTGGCTTGTCGCTTTCCTT +
Preference number: 6 (lower is better)
Translates to: APRSNVGAMVLS*SQVLQWLVAFL
Trigger: AAGGAAAGCGACAAGCCACTGTAGAACCTGCGATCAAGAGAGCACCATGGCTCCTACATTGGACCTTGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356654.8
ENST00000396684.3
ENST00000537488.1
CDS GCA 72 bp TCACTTTCACTCTCTGAGATCTCCTCACTCCGACCCTaGTTGTTGACCTTTGGGGTGGAGGCTTCCTCTACT +
Preference number: 6 (lower is better)
Translates to: SLSLSEISSLRP*LLTFGVEASST
Trigger: AGTAGAGGAAGCCTCCACCCCAAAGGTCAACAAGCAGGGTCGGAGTGAGGAGATCTCAGAGAGTGAAAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3
CDS CAA 72 bp TGCTCCAAGGTCCAATGTAGGAGCCATGGTGCTCTCTaGATCGCAGGTTCTACAGTGGCTTGTCGCTTTCCT +
Preference number: 6 (lower is better)
Translates to: CSKVQCRSHGAL*IAGSTVACRFP
Trigger: AGGAAAGCGACAAGCCACTGTAGAACCTGCGATCAAGAGAGCACCATGGCTCCTACATTGGACCTTGGAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356654.8
ENST00000396684.3
ENST00000537488.1
CDS CAA 90 bp TGGGAAGCAGGATCTCCAAGTTTCCAGTGTGGGCACCTGGAACTTTaGCAGGATCTGTTTTCAATGAAACCTGCTGGTAGCTCGGGACGG +
Preference number: 6 (lower is better)
Translates to: WEAGSPSFQCGHLEL*QDLFSMKPAGSSGR
Trigger: CCGTCCCGAGCTACCAGCAGGTTTCATTGAAAACAGATCCTGCAAAAGTTCCAGGTGCCCACACTGGAAACTTGGAGATCCTGCTTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396684.3
CDS CAA 90 bp TGGGAAGCAGGATCTCCAAGTTTCCAGTGTGGGCACCTGGAACTTTaGCAGGATCTGTTTTCAATGAAACCTTCGCAGAAGCAGAGCGGG +
Preference number: 6 (lower is better)
Translates to: WEAGSPSFQCGHLEL*QDLFSMKPSQKQSG
Trigger: CCCGCTCTGCTTCTGCGAAGGTTTCATTGAAAACAGATCCTGCAAAAGTTCCAGGTGCCCACACTGGAAACTTGGAGATCCTGCTTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356654.8
CDS CAA 72 bp GTGGCCGAGGGAGTTCCTGCTCAGTTTTGGTCTTTTTaGGTGCATTGGTCTCCTCACTTTCACTCTCTGAGA +
Preference number: 6 (lower is better)
Translates to: VAEGVPAQFWSF*VHWSPHFHSLR
Trigger: TCTCAGAGAGTGAAAGTGAGGAGACCAATGCACCAAAAAAGACCAAAACTGAGCAGGAACTCCCTCGGCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356654.8
ENST00000396684.3