RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ATM (Homo sapiens)

Ensembl gene IDs: ENSG00000149311

Ensembl transcript IDs: ENST00000278616.8, ENST00000278616.9, ENST00000419286.2, ENST00000452508.6, ENST00000524792.5, ENST00000525012.5, ENST00000525056.2, ENST00000526567.5, ENST00000527805.6, ENST00000529588.5, ENST00000530958.5, ENST00000531525.2, ENST00000532931.5, ENST00000533526.1, ENST00000533690.5, ENST00000533733.6, ENST00000601453.2, ENST00000638443.1, ENST00000638786.2, ENST00000639240.1, ENST00000639953.1, ENST00000640388.1, ENST00000675595.1, ENST00000675843.1, ENST00000682147.1, ENST00000682289.1, ENST00000682430.1, ENST00000682465.1, ENST00000682516.1, ENST00000682569.1, ENST00000682956.1, ENST00000683100.1, ENST00000683150.1, ENST00000683174.1, ENST00000683468.1, ENST00000683488.1, ENST00000683524.1, ENST00000683605.1, ENST00000683914.1, ENST00000684029.1, ENST00000684037.1, ENST00000684061.1, ENST00000684152.1, ENST00000684179.1, ENST00000684447.1

Found 1390 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCTATATGGGGAGCAAAGAACCCAGGGCTTGCCAAAGGCAGGCAGTaGGAATTAAATGTACCTCCTTCCACCCCTGCCATAAAGGTGGGA +
Preference number: 1 (lower is better)
Translates to: SIWGAKNPGLAKGRQ*ELNVPPSTPAIKVG
Trigger: TCCCACCTTTATGGCAGGGGTGGAAGGAGGTACATTTAATTCCCACTGCCTGCCTTTGGCAAGCCCTGGGTTCTTTGCTCCCCATATAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278616.8
ENST00000452508.6
ENST00000675843.1
3UTR CCA 90 bp TTCTGCCCACTAGCACAAGGAGATGAGGAGGAAGTGTGTTTGCCTTaGCCTGGGAAATCTCCTATCAGTATTTATGCTACACTTCAGGTA +
Preference number: 1 (lower is better)
Translates to: FCPLAQGDEEEVCLP*PGKSPISIYATLQV
Trigger: TACCTGAAGTGTAGCATAAATACTGATAGGAGATTTCCCAGGCCAAGGCAAACACACTTCCTCCTCATCTCCTTGTGCTAGTGGGCAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278616.8
ENST00000452508.6
ENST00000675843.1
3UTR TCA 90 bp CACCCCTGCCATAAAGGTGGGACACATGGAAGCTTATACTCTCAGTaGAAAAGGCATCAATCAAATATTCTGCCCACTAGCACAAGGAGA +
Preference number: 1 (lower is better)
Translates to: HPCHKGGTHGSLYSQ*KRHQSNILPTSTRR
Trigger: TCTCCTTGTGCTAGTGGGCAGAATATTTGATTGATGCCTTTTTCACTGAGAGTATAAGCTTCCATGTGTCCCACCTTTATGGCAGGGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278616.8
ENST00000452508.6
ENST00000675843.1
3UTR TCA 90 bp ATCAGGATCTCCAAAATGACTGTGCGTAGAGCCATGATAGGCTCCTaGAAACTAAAATCACTGTCCTTGAGAAGCTGGGAGTGTTTCTGC +
Preference number: 1 (lower is better)
Translates to: IRISKMTVRRAMIGS*KLKSLSLRSWECFC
Trigger: GCAGAAACACTCCCAGCTTCTCAAGGACAGTGATTTTAGTTTTCAGGAGCCTATCATGGCTCTACGCACAGTCATTTTGGAGATCCTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR CCA 90 bp CTCTTCCTAGTTTCCGTGTTTCTCTGCAGTAATGTATTACACATCTaGAAGACCTGTTGCATGACAGCATCTTGTCTCAGGTCATCACGG +
Preference number: 1 (lower is better)
Translates to: LFLVSVFLCSNVLHI*KTCCMTASCLRSSR
Trigger: CCGTGATGACCTGAGACAAGATGCTGTCATGCAACAGGTCTTCCAGATGTGTAATACATTACTGCAGAGAAACACGGAAACTAGGAAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR TCA 90 bp CTGAGATTTCGTTTGCATTCTTGGTCATCTGCATTCAGAGTAGGGTaGAGCTCAGTTTCATCTTCCGGCCTCTGCTGTAAATACAAAGCT +
Preference number: 1 (lower is better)
Translates to: LRFRLHSWSSAFRVG*SSVSSSGLCCKYKA
Trigger: AGCTTTGTATTTACAGCAGAGGCCGGAAGATGAAACTGAGCTTCACCCTACTCTGAATGCAGATGACCAAGAATGCAAACGAAATCTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR TCA 90 bp CGGCTCGTTTGCGAGAAGTGTCGAAGACAGCTGGTGAAAAATCCCTaGACATGTGTAGAAAGCAGATTTCTCCATGATTCATTTGTATCT +
Preference number: 1 (lower is better)
Translates to: RLVCEKCRRQLVKNP*TCVESRFLHDSFVS
Trigger: AGATACAAATGAATCATGGAGAAATCTGCTTTCTACACATGTTCAGGGATTTTTCACCAGCTGTCTTCGACACTTCTCGCAAACGAGCCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR CCA 90 bp CATCTTCCGGCCTCTGCTGTAAATACAAAGCTTTCAAAGGATTCATaGTCCAGTCAAAGAGTGGATCATATAGAAGGACCTCTACAATGG +
Preference number: 1 (lower is better)
Translates to: HLPASAVNTKLSKDS*SSQRVDHIEGPLQW
Trigger: CCATTGTAGAGGTCCTTCTATATGATCCACTCTTTGACTGGACCATGAATCCTTTGAAAGCTTTGTATTTACAGCAGAGGCCGGAAGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR CCA 90 bp CCCAAATATGTCTGTATCACAGCACATTATGAACTCTGGTTTACTTaGGTTTTCTTCTGCCACTGTCAACTCCTTGACGATGGAGATGGT +
Preference number: 1 (lower is better)
Translates to: PKYVCITAHYELWFT*VFFCHCQLLDDGDG
Trigger: ACCATCTCCATCGTCAAGGAGTTGACAGTGGCAGAAGAAAACCCAAGTAAACCAGAGTTCATAATGTGCTGTGATACAGACATATTTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530958.5
3UTR CCA 90 bp CCTACTGAACCCAAATATGTCTGTATCACAGCACATTATGAACTCTaGTTTACTTGGGTTTTCTTCTGCCACTGTCAACTCCTTGACGAT +
Preference number: 1 (lower is better)
Translates to: PTEPKYVCITAHYEL*FTWVFFCHCQLLDD
Trigger: ATCGTCAAGGAGTTGACAGTGGCAGAAGAAAACCCAAGTAAACCAGAGTTCATAATGTGCTGTGATACAGACATATTTGGGTTCAGTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530958.5
3UTR TCA 90 bp ATTAAAATAAGAATGGGCTTGTGTGCAGCAACAGCCCTGGGAATATaGCATAAACAGACACTCAAGATTCCCATAGATAAAGCCTTGCTG +
Preference number: 1 (lower is better)
Translates to: IKIRMGLCAATALGI*HKQTLKIPIDKALL
Trigger: CAGCAAGGCTTTATCTATGGGAATCTTGAGTGTCTGTTTATGTCATATTCCCAGGGCTGTTGCTGCACACAAGCCCATTCTTATTTTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278616.8
ENST00000452508.6
ENST00000675843.1
3UTR TCA 90 bp AGTGGATCATATAGAAGGACCTCTACAATGGTTAACAGAGTTTCCTaGGAGTTTCTCATCACTTCCATGGTTTTCTCACAGCATCTTCTG +
Preference number: 1 (lower is better)
Translates to: SGSYRRTSTMVNRVS*EFLITSMVFSQHLL
Trigger: CAGAAGATGCTGTGAGAAAACCATGGAAGTGATGAGAAACTCTCAGGAAACTCTGTTAACCATTGTAGAGGTCCTTCTATATGATCCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR GCA 90 bp TGTATCACAGCACATTATGAACTCTGGTTTACTTGGGTTTTCTTCTaGCACTGTCAACTCCTTGACGATGGAGATGGTATTTTTCAACTG +
Preference number: 1 (lower is better)
Translates to: CITAHYELWFTWVFF*HCQLLDDGDGIFQL
Trigger: CAGTTGAAAAATACCATCTCCATCGTCAAGGAGTTGACAGTGGCAGAAGAAAACCCAAGTAAACCAGAGTTCATAATGTGCTGTGATACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530958.5
3UTR TCA 90 bp ATTAAAAATCAGGCTGGCCTGAGTGCAGTGGTGTTTACAACGAATTaGTCACAACCAGTTACAGATTTCTTTGTTCCTTCTAAACTCCCA +
Preference number: 1 (lower is better)
Translates to: IKNQAGLSAVVFTTN*SQPVTDFFVPSKLP
Trigger: TGGGAGTTTAGAAGGAACAAAGAAATCTGTAACTGGTTGTGATCAATTCGTTGTAAACACCACTGCACTCAGGCCAGCCTGATTTTTAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638443.1
3UTR TCA 90 bp TTCTACAAGGTGTTTGGTGAGAATGTCCTTAATACATTCTCTTTGTaGGTTGTCCATTTCCTTTTCCATCAGGATCTCCAAAATGACTGT +
Preference number: 1 (lower is better)
Translates to: FYKVFGENVLNTFSL*VVHFLFHQDLQNDC
Trigger: ACAGTCATTTTGGAGATCCTGATGGAAAAGGAAATGGACAACTCACAAAGAGAATGTATTAAGGACATTCTCACCAAACACCTTGTAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR-3UTR TCA 90 bp CAGGCAGTGGGAATTAAATGTACCTCCTTCCACCCCTGCCATAAAGGTGGGACAGAACTCCTGACCTTGTaGTCCGCTCACCTCGGCCTC +
Preference number: 2 (lower is better)
Translates to: QAVGIKCTSFHPCHKGGTELLTL*SAHLGL
Trigger: GAGGCCGAGGTGAGCGGATCACAAGGTCAGGAGTTC...TGTCCCACCTTTATGGCAGGGGTGGAAGGAGGTACATTTAATTCCCACTGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278616.8
ENST00000452508.6
ENST00000675843.1
3UTR-3UTR TCA 90 bp CTACTAGGAAGGCTGAGGCACGAGAATCTGAGCTCAGGAGGTGGAGGTTGCAGTGGCAGGAGGATCACTTaGGGCCAAGAATTCGAGACC +
Preference number: 2 (lower is better)
Translates to: LLGRLRHENLSSGGGGCSGRRIT*GQEFET
Trigger: GGTCTCGAATTCTTGGCCTCAAGTGATCCTCCTGCC...ACTGCAACCTCCACCTCCTGAGCTCAGATTCTCGTGCCTCAGCCTTCCTAGTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531525.2
3UTR-3UTR CCA 90 bp AGGCAGGCAGTGGGAATTAAATGTACCTCCTTCCACCCCTGCCATAAAGGTGGGAGGGTTTCACCATACTaGCCAGGCTGGTCTCTTGGC +
Preference number: 2 (lower is better)
Translates to: RQAVGIKCTSFHPCHKGGRVSPY*PGWSLG
Trigger: GCCAAGAGACCAGCCTGGCCAGTATGGTGAAACCCT...CCCACCTTTATGGCAGGGGTGGAAGGAGGTACATTTAATTCCCACTGCCTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278616.8
ENST00000452508.6
ENST00000675843.1
3UTR-3UTR CCA 90 bp CACAAGGAGATGAGGAGGAAGTGTGTTTGCCTTGGCCTGGGAAATCTCCTATCAAGCCTCTCGAGTAGCTaGGATTACAGGTGCCCGCCA +
Preference number: 2 (lower is better)
Translates to: HKEMRRKCVCLGLGNLLSSLSSS*DYRCPP
Trigger: TGGCGGGCACCTGTAATCCCAGCTACTCGAGAGGCT...TGATAGGAGATTTCCCAGGCCAAGGCAAACACACTTCCTCCTCATCTCCTTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278616.8
ENST00000452508.6
ENST00000675843.1
3UTR-3UTR CCA 90 bp AGGCAGGCAGTGGGAATTAAATGTACCTCCTTCCACCCCTGCCATAAAGGTGGGCAGGCTGGAGTGCAATaGCATGATTTTGGCCCACAG +
Preference number: 2 (lower is better)
Translates to: RQAVGIKCTSFHPCHKGGQAGVQ*HDFGPQ
Trigger: CTGTGGGCCAAAATCATGCCATTGCACTCCAGCCTG...CCCACCTTTATGGCAGGGGTGGAAGGAGGTACATTTAATTCCCACTGCCTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278616.8
ENST00000452508.6
ENST00000675843.1
3UTR-3UTR GCA 90 bp AGGCAGGCAGTGGGAATTAAATGTACCTCCTTCCACCCCTGCCATAAAGGTGGGAGGAGGAAGTGTGTTTaGCTTGGCCTGGGAAATCTC +
Preference number: 2 (lower is better)
Translates to: RQAVGIKCTSFHPCHKGGRRKCV*LGLGNL
Trigger: GAGATTTCCCAGGCCAAGGCAAACACACTTCCTCCT...CCCACCTTTATGGCAGGGGTGGAAGGAGGTACATTTAATTCCCACTGCCTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278616.8
ENST00000452508.6
ENST00000675843.1
3UTR-3UTR CCA 90 bp CAGGCAGTGGGAATTAAATGTACCTCCTTCCACCCCTGCCATAAAGGTGGGACACAGGCTGGAGTGCAATaGCATGATTTTGGCCCACAG +
Preference number: 2 (lower is better)
Translates to: QAVGIKCTSFHPCHKGGTQAGVQ*HDFGPQ
Trigger: CTGTGGGCCAAAATCATGCCATTGCACTCCAGCCTG...TGTCCCACCTTTATGGCAGGGGTGGAAGGAGGTACATTTAATTCCCACTGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278616.8
ENST00000452508.6
ENST00000675843.1
3UTR-3UTR TCA 90 bp CACCAATGGGGACAGTTCCTGTGCACCATTCAAGAACACCACTTCGCTGAGAGAAAATTCTGCAAGGCCTaGATGATTCCTGCCTGGCGT +
Preference number: 2 (lower is better)
Translates to: HQWGQFLCTIQEHHFAERKFCKA*MIPAWR
Trigger: ACGCCAGGCAGGAATCATTCAGGCCTTGCAGAATTT...TCTCTCAGCGAAGTGGTGTTCTTGAATGGTGCACAGGAACTGTCCCCATTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR-3UTR GCA 90 bp GCCTCCCATCATCTTGGTCCCCATTCTAGCAGCCAATTGGTACATAAGAGGCAAAGCTCTCCAATGGCCTaGAACCTGCTAAGTGTGGGA +
Preference number: 2 (lower is better)
Translates to: ASHHLGPHSSSQLVHKRQSSPMA*NLLSVG
Trigger: TCCCACACTTAGCAGGTTGCAGGCCATTGGAGAGCT...TTGCCTCTTATGTACCAATTGGCTGCTAGAATGGGGACCAAGATGATGGGAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR-3UTR GCA 90 bp GCCTCCCATCATCTTGGTCCCCATTCTAGCAGCCAATTGGTACATAAGAGGCAAGCTGGGATTGTTCGCTaGACAGCTGGCATCCAACTT +
Preference number: 2 (lower is better)
Translates to: ASHHLGPHSSSQLVHKRQAGIVR*TAGIQL
Trigger: AAGTTGGATGCCAGCTGTGCAGCGAACAATCCCAGC...TTGCCTCTTATGTACCAATTGGCTGCTAGAATGGGGACCAAGATGATGGGAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR-3UTR TCA 90 bp CAGGCAGTGGGAATTAAATGTACCTCCTTCCACCCCTGCCATAAAGGTGGGACATGCGCCCAGCCCGAATaGCCATTATTTCTAAAGAGT +
Preference number: 2 (lower is better)
Translates to: QAVGIKCTSFHPCHKGGTCAQPE*PLFLKS
Trigger: ACTCTTTAGAAATAATGGTCATTCGGGCTGGGCGCA...TGTCCCACCTTTATGGCAGGGGTGGAAGGAGGTACATTTAATTCCCACTGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278616.8
ENST00000452508.6
ENST00000675843.1
3UTR-3UTR TCA 90 bp GATCTTGAGAAAAGCTCCCCAATGCTTTCCAGCTCTCCAATGGCCTGCAACCTGGTCGAAGACAGCTGGTaGAAAATCCCTGAACATGTG +
Preference number: 2 (lower is better)
Translates to: DLEKSSPMLSSSPMACNLVEDSW*KIPEHV
Trigger: CACATGTTCAGGGATTTTTCACCAGCTGTCTTCGAC...CAGGTTGCAGGCCATTGGAGAGCTGGAAAGCATTGGGGAGCTTTTCTCAAGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR-3UTR TCA 90 bp CTAAGCACGTTTCTGCTAACCAGTTGCCACAAACCCTCAGACATTCTGTGTATGTCTGCAAGGCCTGAATaGTTCCTGCCTGGCGTGTTG +
Preference number: 2 (lower is better)
Translates to: LSTFLLTSCHKPSDILCMSARPE*FLPGVL
Trigger: CAACACGCCAGGCAGGAATCATTCAGGCCTTGCAGA...CATACACAGAATGTCTGAGGGTTTGTGGCAACTGGTTAGCAGAAACGTGCTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR-3UTR CCA 90 bp CTCAATCACCCATTTGTTAATCTCCGCAGCTGGGATGAACATTTTCCTAAGGATCCATACTGGCCAGGCTaGTCTCTTGGCCAGGCTGGT +
Preference number: 2 (lower is better)
Translates to: LNHPFVNLRSWDEHFPKDPYWPG*SLGQAG
Trigger: ACCAGCCTGGCCAAGAGACCAGCCTGGCCAGTATGG...ATCCTTAGGAAAATGTTCATCCCAGCTGCGGAGATTAACAAATGGGTGATTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278616.8
ENST00000452508.6
ENST00000675843.1
3UTR CAA 90 bp GCTGAGATTTTTGGGGTCTATGGCCTGCTGTATGAGCAAATTCACTaGTCCACCAACACTGAGCACAGTGCCTTCTTCCACTCCTTTCAG +
Preference number: 2 (lower is better)
Translates to: AEIFGVYGLLYEQIH*STNTEHSAFFHSFQ
Trigger: CTGAAAGGAGTGGAAGAAGGCACTGTGCTCAGTGTTGGTGGACAAGTGAATTTGCTCATACAGCAGGCCATAGACCCCAAAAATCTCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR-3UTR TCA 90 bp CACAAGGAGATGAGGAGGAAGTGTGTTTGCCTTGGCCTGGGAAATCTCCTATCATGCGCCCAGCCCGAATaGCCATTATTTCTAAAGAGT +
Preference number: 2 (lower is better)
Translates to: HKEMRRKCVCLGLGNLLSCAQPE*PLFLKS
Trigger: ACTCTTTAGAAATAATGGTCATTCGGGCTGGGCGCA...TGATAGGAGATTTCCCAGGCCAAGGCAAACACACTTCCTCCTCATCTCCTTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278616.8
ENST00000452508.6
ENST00000675843.1
3UTR-3UTR TCA 90 bp GTTTACGATCCTCTTTCAGTGCACGCAGGGCTAATTCATCCAACTCCAGCTCTCGTCGAAGACAGCTGGTaGAAAATCCCTGAACATGTG +
Preference number: 2 (lower is better)
Translates to: VYDPLSVHAGLIHPTPALVEDSW*KIPEHV
Trigger: CACATGTTCAGGGATTTTTCACCAGCTGTCTTCGAC...GAGAGCTGGAGTTGGATGAATTAGCCCTGCGTGCACTGAAAGAGGATCGTAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR-3UTR TCA 90 bp CACCAATGGGGACAGTTCCTGTGCACCATTCAAGAACACCACTTCGCTGAGAGAGCCATGATAGGCTCCTaGAAACTAAAATCACTGTCC +
Preference number: 2 (lower is better)
Translates to: HQWGQFLCTIQEHHFAERAMIGS*KLKSLS
Trigger: GGACAGTGATTTTAGTTTTCAGGAGCCTATCATGGC...TCTCTCAGCGAAGTGGTGTTCTTGAATGGTGCACAGGAACTGTCCCCATTGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR-3UTR TCA 90 bp CTACTAGGAAGGCTGAGGCACGAGAATCTGAGCTCAGGAGGTGGAGGTTGCAGTTTAAAATTAGCACCCTaGGAAGCTCTCATAATGTCC +
Preference number: 2 (lower is better)
Translates to: LLGRLRHENLSSGGGGCSLKLAP*EALIMS
Trigger: GGACATTATGAGAGCTTCTCAGGGTGCTAATTTTAA...ACTGCAACCTCCACCTCCTGAGCTCAGATTCTCGTGCCTCAGCCTTCCTAGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531525.2
3UTR-3UTR TCA 90 bp GAATATTCAGAGGAGAGTAGCATAAAACCTAGGTCACGTGAGCTGAAGAAAGTGCTGGTCTCGATCTCCTaGCCTCAGGTGATCTGCCTG +
Preference number: 2 (lower is better)
Translates to: EYSEESSIKPRSRELKKVLVSIS*PQVICL
Trigger: CAGGCAGATCACCTGAGGTCAGGAGATCGAGACCAG...CACTTTCTTCAGCTCACGTGACCTAGGTTTTATGCTACTCTCCTCTGAATATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638443.1
3UTR-3UTR GCA 90 bp CTAAGCACGTTTCTGCTAACCAGTTGCCACAAACCCTCAGACATTCTGTGTATGGTGGATCGGCTCGTTTaGGAGAAGTGTCGAAGACAG +
Preference number: 2 (lower is better)
Translates to: LSTFLLTSCHKPSDILCMVDRLV*EKCRRQ
Trigger: CTGTCTTCGACACTTCTCGCAAACGAGCCGATCCAC...CATACACAGAATGTCTGAGGGTTTGTGGCAACTGGTTAGCAGAAACGTGCTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR-3UTR GCA 90 bp GTTTACGATCCTCTTTCAGTGCACGCAGGGCTAATTCATCCAACTCCAGCTCTCAGAAAAGCTCCCCAATaGTTTCCAGCTCTCCAATGG +
Preference number: 2 (lower is better)
Translates to: VYDPLSVHAGLIHPTPALRKAPQ*FPALQW
Trigger: CCATTGGAGAGCTGGAAAGCATTGGGGAGCTTTTCT...GAGAGCTGGAGTTGGATGAATTAGCCCTGCGTGCACTGAAAGAGGATCGTAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR-3UTR CCA 90 bp ATTAGAATACTTGAACAGAACAGGAGCCTCATAGCATACCATGCAAGGCTAAAGCCATACTGGCCAGGCTaGTCTCTTGGCCAGGCTGGT +
Preference number: 2 (lower is better)
Translates to: IRILEQNRSLIAYHARLKPYWPG*SLGQAG
Trigger: ACCAGCCTGGCCAAGAGACCAGCCTGGCCAGTATGG...CTTTAGCCTTGCATGGTATGCTATGAGGCTCCTGTTCTGTTCAAGTATTCTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278616.8
ENST00000452508.6
ENST00000675843.1
3UTR-3UTR CCA 90 bp GCTGGCATCCAACTTCTTGATCATTTGCTTGAGAATACTCAGGGCAAGACTCTGAGTTTGCAGGGGTTGTaGATCGGCTCGTTTGCGAGA +
Preference number: 2 (lower is better)
Translates to: AGIQLLDHLLENTQGKTLSLQGL*IGSFAR
Trigger: TCTCGCAAACGAGCCGATCCACAACCCCTGCAAACT...CAGAGTCTTGCCCTGAGTATTCTCAAGCAAATGATCAAGAAGTTGGATGCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR-3UTR TCA 90 bp CTACTAGGAAGGCTGAGGCACGAGAATCTGAGCTCAGGAGGTGGAGGTTGCAGTATAATGTCCACCATCTaGTCTTTATGTAGTTCCAGT +
Preference number: 2 (lower is better)
Translates to: LLGRLRHENLSSGGGGCSIMSTI*SLCSSS
Trigger: ACTGGAACTACATAAAGATCAGATGGTGGACATTAT...ACTGCAACCTCCACCTCCTGAGCTCAGATTCTCGTGCCTCAGCCTTCCTAGTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531525.2
3UTR-3UTR GCA 90 bp AAAGGCATCAATCAAATATTCTGCCCACTAGCACAAGGAGATGAGGAGGAAGTGTCACCCAGGCTGGAGTaGAATGGCATGATTTTGGCC +
Preference number: 2 (lower is better)
Translates to: KGINQIFCPLAQGDEEEVSPRLE*NGMILA
Trigger: GGCCAAAATCATGCCATTGCACTCCAGCCTGGGTGA...CACTTCCTCCTCATCTCCTTGTGCTAGTGGGCAGAATATTTGATTGATGCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278616.8
ENST00000452508.6
ENST00000675843.1
3UTR-3UTR GCA 90 bp CTCAATCACCCATTTGTTAATCTCCGCAGCTGGGATGAACATTTTCCTAAGGATAAAGAACCCAGGGCTTaGCAAAGGCAGGCAGTGGGA +
Preference number: 2 (lower is better)
Translates to: LNHPFVNLRSWDEHFPKDKEPRA*QRQAVG
Trigger: TCCCACTGCCTGCCTTTGGCAAGCCCTGGGTTCTTT...ATCCTTAGGAAAATGTTCATCCCAGCTGCGGAGATTAACAAATGGGTGATTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278616.8
ENST00000452508.6
ENST00000675843.1
3UTR-3UTR GCA 90 bp CAGTTGCCACAAACCCTCAGACATTCTGTGTATGTAAGTTTTAGGCTGGGATTGAGCTCTCCAATGGCCTaGAACCTGCTAAGTGTGGGA +
Preference number: 2 (lower is better)
Translates to: QLPQTLRHSVYVSFRLGLSSPMA*NLLSVG
Trigger: TCCCACACTTAGCAGGTTGCAGGCCATTGGAGAGCT...CAATCCCAGCCTAAAACTTACATACACAGAATGTCTGAGGGTTTGTGGCAACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR-3UTR GCA 90 bp ACTGTCTCAGGAGTAGGAAGGATTTTGCCCTGTTCAAAAGCAACACCTAGATCTTGTGCTTCTTCCAGCTaGCACTCAGAGACTCCACAG +
Preference number: 2 (lower is better)
Translates to: TVSGVGRILPCSKATPRSCASSS*HSETPQ
Trigger: CTGTGGAGTCTCTGAGTGGCAGCTGGAAGAAGCACA...AGATCTAGGTGTTGCTTTTGAACAGGGCAAAATCCTTCCTACTCCTGAGACAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR CAA 90 bp AGTTTTAGGCTGGGATTGTTCGCTGCACAGCTGGCATCCAACTTCTaGATCATTTGCTTGAGAATACTCAGGGCAAGACTCTGCTCCTTT +
Preference number: 2 (lower is better)
Translates to: SFRLGLFAAQLASNF*IICLRILRARLCSF
Trigger: AAAGGAGCAGAGTCTTGCCCTGAGTATTCTCAAGCAAATGATCAAGAAGTTGGATGCCAGCTGTGCAGCGAACAATCCCAGCCTAAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR-3UTR TCA 90 bp GCACAGCTGGCATCCAACTTCTTGATCATTTGCTTGAGAATACTCAGGGCAAGATGCGCCCAGCCCGAATaGCCATTATTTCTAAAGAGT +
Preference number: 2 (lower is better)
Translates to: AQLASNFLIICLRILRARCAQPE*PLFLKS
Trigger: ACTCTTTAGAAATAATGGTCATTCGGGCTGGGCGCA...TCTTGCCCTGAGTATTCTCAAGCAAATGATCAAGAAGTTGGATGCCAGCTGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527805.6
3UTR-3UTR TCA 90 bp TCTAAGCACGTTTCTGCTAACCAGTTGCCACAAACCCTCAGACATTCTGTGTATAAATTCTGCAAGGCCTaGATGATTCCTGCCTGGCGT +
Preference number: 2 (lower is better)
Translates to: SKHVSANQLPQTLRHSVYKFCKA*MIPAWR
Trigger: ACGCCAGGCAGGAATCATTCAGGCCTTGCAGAATTT...ATACACAGAATGTCTGAGGGTTTGTGGCAACTGGTTAGCAGAAACGTGCTTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR-3UTR TCA 90 bp TTGTTCGCTGCACAGCTGGCATCCAACTTCTTGATCATTTGCTTGAGAATACTCCTTCTACTTCTTTGCTaGCGGAAGTGCAATGGTCCC +
Preference number: 2 (lower is better)
Translates to: LFAAQLASNFLIICLRILLLLLC*RKCNGP
Trigger: GGGACCATTGCACTTCCGTCAGCAAAGAAGTAGAAG...GAGTATTCTCAAGCAAATGATCAAGAAGTTGGATGCCAGCTGTGCAGCGAACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR-3UTR TCA 90 bp TCTAAGCACGTTTCTGCTAACCAGTTGCCACAAACCCTCAGACATTCTGTGTATGCCCTTTCAGGGAGCTaGGTGTTCTTGAAAGTTCTG +
Preference number: 2 (lower is better)
Translates to: SKHVSANQLPQTLRHSVYALSGS*VFLKVL
Trigger: CAGAACTTTCAAGAACACTCAGCTCCCTGAAAGGGC...ATACACAGAATGTCTGAGGGTTTGTGGCAACTGGTTAGCAGAAACGTGCTTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR-3UTR TCA 90 bp GCTTTAAATGACTGTATAGTCACCAGATTTCCATATTCTCCTGTGTGGTCCACCGTGCCTCAACACTTCTaGCCATCTGAGGTCTCCTAC +
Preference number: 2 (lower is better)
Translates to: ALNDCIVTRFPYSPVWSTVPQHF*PSEVSY
Trigger: GTAGGAGACCTCAGATGGTCAGAAGTGTTGAGGCAC...GGTGGACCACACAGGAGAATATGGAAATCTGGTGACTATACAGTCATTTAAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR-3UTR GCA 90 bp CTCAATCACCCATTTGTTAATCTCCGCAGCTGGGATGAACATTTTCCTAAGGATTCACCCAGGCTGGAGTaGAATGGCATGATTTTGGCC +
Preference number: 2 (lower is better)
Translates to: LNHPFVNLRSWDEHFPKDSPRLE*NGMILA
Trigger: GGCCAAAATCATGCCATTGCACTCCAGCCTGGGTGA...ATCCTTAGGAAAATGTTCATCCCAGCTGCGGAGATTAACAAATGGGTGATTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278616.8
ENST00000452508.6
ENST00000675843.1
3UTR-3UTR GCA 90 bp TCTAAGCACGTTTCTGCTAACCAGTTGCCACAAACCCTCAGACATTCTGTGTATTGCCCAGAATACTTGTaGTTCTTCCAGCTGCCACTC +
Preference number: 2 (lower is better)
Translates to: SKHVSANQLPQTLRHSVYCPEYL*FFQLPL
Trigger: GAGTGGCAGCTGGAAGAAGCACAAGTATTCTGGGCA...ATACACAGAATGTCTGAGGGTTTGTGGCAACTGGTTAGCAGAAACGTGCTTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR-3UTR GCA 90 bp GAATATTCAGAGGAGAGTAGCATAAAACCTAGGTCACGTGAGCTGAAGAAAGTGGCTCACCACAACCTCTaGCTCCTGGGTTCAAGCAAT +
Preference number: 2 (lower is better)
Translates to: EYSEESSIKPRSRELKKVAHHNL*LLGSSN
Trigger: ATTGCTTGAACCCAGGAGGCAGAGGTTGTGGTGAGC...CACTTTCTTCAGCTCACGTGACCTAGGTTTTATGCTACTCTCCTCTGAATATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638443.1
3UTR-3UTR CCA 90 bp GGGAAAGCTATTATCTCCCTTAATCTGGACACAACTGTTCAAGCAGTCTATAATAGCCTCTCGAGTAGCTaGGATTACAGGTGCCCGCCA +
Preference number: 2 (lower is better)
Translates to: GKAIISLNLDTTVQAVYNSLSSS*DYRCPP
Trigger: TGGCGGGCACCTGTAATCCCAGCTACTCGAGAGGCT...ATTATAGACTGCTTGAACAGTTGTGTCCAGATTAAGGGAGATAATAGCTTTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278616.8
ENST00000452508.6
ENST00000675843.1
3UTR-3UTR CCA 90 bp CTCAATCACCCATTTGTTAATCTCCGCAGCTGGGATGAACATTTTCCTAAGGATCAGGCTGGAGTGCAATaGCATGATTTTGGCCCACAG +
Preference number: 2 (lower is better)
Translates to: LNHPFVNLRSWDEHFPKDQAGVQ*HDFGPQ
Trigger: CTGTGGGCCAAAATCATGCCATTGCACTCCAGCCTG...ATCCTTAGGAAAATGTTCATCCCAGCTGCGGAGATTAACAAATGGGTGATTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278616.8
ENST00000452508.6
ENST00000675843.1
3UTR-3UTR CCA 90 bp GTTTACGATCCTCTTTCAGTGCACGCAGGGCTAATTCATCCAACTCCAGCTCTCGCCATACAAACTATCTaGCTCCCCTATACTTCTGTA +
Preference number: 2 (lower is better)
Translates to: VYDPLSVHAGLIHPTPALAIQTI*LPYTSV
Trigger: TACAGAAGTATAGGGGAGCCAGATAGTTTGTATGGC...GAGAGCTGGAGTTGGATGAATTAGCCCTGCGTGCACTGAAAGAGGATCGTAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR-3UTR TCA 90 bp GAGTTGTCCATTTCCTTTTCCATCAGGATCTCCAAAATGACTGTGCGTAGAGCCGGTAGGTCAGCATTATaGAGGTCCACTGAAGTTCTT +
Preference number: 2 (lower is better)
Translates to: ELSISFSIRISKMTVRRAGRSAL*RSTEVL
Trigger: AAGAACTTCAGTGGACCTTCATAATGCTGACCTACC...GGCTCTACGCACAGTCATTTTGGAGATCCTGATGGAAAAGGAAATGGACAACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR-3UTR TCA 90 bp AGCATCACAAAGTGCCTCAACACTTCTGACCATCTGAGGTCTCCTACTTCTGATCTGCTGATCGAACTTTaGCACAATCTTCTACCAGTG +
Preference number: 2 (lower is better)
Translates to: SITKCLNTSDHLRSPTSDLLIEL*HNLLPV
Trigger: CACTGGTAGAAGATTGTGTCAAAGTTCGATCAGCAG...ATCAGAAGTAGGAGACCTCAGATGGTCAGAAGTGTTGAGGCACTTTGTGATGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR-3UTR TCA 90 bp GATCTTGAGAAAAGCTCCCCAATGCTTTCCAGCTCTCCAATGGCCTGCAACCTGTATGGAAGTACAGTCTaGCAAAAGTCAGTTTTCACT +
Preference number: 2 (lower is better)
Translates to: DLEKSSPMLSSSPMACNLYGSTV*QKSVFT
Trigger: AGTGAAAACTGACTTTTGTCAGACTGTACTTCCATA...CAGGTTGCAGGCCATTGGAGAGCTGGAAAGCATTGGGGAGCTTTTCTCAAGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR-3UTR TCA 90 bp CACCAATGGGGACAGTTCCTGTGCACCATTCAAGAACACCACTTCGCTGAGAGAAAGCAGATTTCTCCATaGTTCATTTGTATCTTGGAG +
Preference number: 2 (lower is better)
Translates to: HQWGQFLCTIQEHHFAERKQISP*FICILE
Trigger: CTCCAAGATACAAATGAATCATGGAGAAATCTGCTT...TCTCTCAGCGAAGTGGTGTTCTTGAATGGTGCACAGGAACTGTCCCCATTGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR-3UTR TCA 90 bp CCCTCCACCACAGCCATACAAACTATCTGGCTCCCCTATACTTCTGTAGATTTCCTGGTGAAAAATCCCTaGACATGTGTAGAAAGCAGA +
Preference number: 2 (lower is better)
Translates to: PSTTAIQTIWLPYTSVDFLVKNP*TCVESR
Trigger: TCTGCTTTCTACACATGTTCAGGGATTTTTCACCAG...GAAATCTACAGAAGTATAGGGGAGCCAGATAGTTTGTATGGCTGTGGTGGAGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR-3UTR TCA 90 bp TTCAAGAACACCACTTCGCTGAGAGAGGGGAACCACCTTATAAGTACAGATAGTAACTCCAGCTCTCGCTaGACCTTTACTGTGTATCTG +
Preference number: 2 (lower is better)
Translates to: FKNTTSLREGNHLISTDSNSSSR*TFTVYL
Trigger: CAGATACACAGTAAAGGTTCAGCGAGAGCTGGAGTT...ACTATCTGTACTTATAAGGTGGTTCCCCTCTCTCAGCGAAGTGGTGTTCTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR-3UTR TCA 90 bp CCAGAATTTTCAAGCCAGAGGGAACAAAGTCGGAATACCCACATATCATGTTCTCTATTTTCAAATGTGTaGGGAGGAGGGGCTCAGCAC +
Preference number: 2 (lower is better)
Translates to: PEFSSQREQSRNTHISCSLFSNV*GGGAQH
Trigger: GTGCTGAGCCCCTCCTCCTCACACATTTGAAAATAG...AGAACATGATATGTGGGTATTCCGACTTTGTTCCCTCTGGCTTGAAAATTCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000675595.1
3UTR-3UTR GCA 90 bp CAGGCAGTGGGAATTAAATGTACCTCCTTCCACCCCTGCCATAAAGGTGGGACAATCAATCAAATATTCTaGCCACTAGCACAAGGAGAT +
Preference number: 2 (lower is better)
Translates to: QAVGIKCTSFHPCHKGGTINQIF*PLAQGD
Trigger: ATCTCCTTGTGCTAGTGGGCAGAATATTTGATTGAT...TGTCCCACCTTTATGGCAGGGGTGGAAGGAGGTACATTTAATTCCCACTGCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278616.8
ENST00000452508.6
ENST00000675843.1
3UTR-3UTR GCA 90 bp GGGAAAGCTATTATCTCCCTTAATCTGGACACAACTGTTCAAGCAGTCTATAATAAAGAACCCAGGGCTTaGCAAAGGCAGGCAGTGGGA +
Preference number: 2 (lower is better)
Translates to: GKAIISLNLDTTVQAVYNKEPRA*QRQAVG
Trigger: TCCCACTGCCTGCCTTTGGCAAGCCCTGGGTTCTTT...ATTATAGACTGCTTGAACAGTTGTGTCCAGATTAAGGGAGATAATAGCTTTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278616.8
ENST00000452508.6
ENST00000675843.1
3UTR-3UTR GCA 90 bp GAGTTGTCCATTTCCTTTTCCATCAGGATCTCCAAAATGACTGTGCGTAGAGCCCAGCATCGGAAAAAGTaGTCTGACTCTGAATCCAAG +
Preference number: 2 (lower is better)
Translates to: ELSISFSIRISKMTVRRAQHRKK*SDSESK
Trigger: CTTGGATTCAGAGTCAGAGCACTTTTTCCGATGCTG...GGCTCTACGCACAGTCATTTTGGAGATCCTGATGGAAAAGGAAATGGACAACTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR-3UTR GCA 90 bp TTGTTCGCTGCACAGCTGGCATCCAACTTCTTGATCATTTGCTTGAGAATACTCGGCTTTGCCCCACATTaGTTCGTGTTCATATGTTCG +
Preference number: 2 (lower is better)
Translates to: LFAAQLASNFLIICLRILGFAPH*FVFICS
Trigger: CGAACATATGAACACGAAGCAATGTGGGGCAAAGCC...GAGTATTCTCAAGCAAATGATCAAGAAGTTGGATGCCAGCTGTGCAGCGAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR-3UTR GCA 90 bp CTAAGCACGTTTCTGCTAACCAGTTGCCACAAACCCTCAGACATTCTGTGTATGATGTTACTAGGGCTTTaGCCCACATTGCTTCGTGTT +
Preference number: 2 (lower is better)
Translates to: LSTFLLTSCHKPSDILCMMLLGL*PTLLRV
Trigger: AACACGAAGCAATGTGGGGCAAAGCCCTAGTAACAT...CATACACAGAATGTCTGAGGGTTTGTGGCAACTGGTTAGCAGAAACGTGCTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR-3UTR GCA 90 bp TTCAAGAACACCACTTCGCTGAGAGAGGGGAACCACCTTATAAGTACAGATAGTAGAAAAGCTCCCCAATaGTTTCCAGCTCTCCAATGG +
Preference number: 2 (lower is better)
Translates to: FKNTTSLREGNHLISTDSRKAPQ*FPALQW
Trigger: CCATTGGAGAGCTGGAAAGCATTGGGGAGCTTTTCT...ACTATCTGTACTTATAAGGTGGTTCCCCTCTCTCAGCGAAGTGGTGTTCTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR-3UTR GCA 90 bp AGCCAGAGGGAACAAAGTCGGAATACCCACATATCATGTTCTTCTCCACTTAATTGCCCAGAATACTTGTaGTTCTTCCAGCTGCCACTC +
Preference number: 2 (lower is better)
Translates to: SQREQSRNTHISCSSPLNCPEYL*FFQLPL
Trigger: GAGTGGCAGCTGGAAGAAGCACAAGTATTCTGGGCA...ATTAAGTGGAGAAGAACATGATATGTGGGTATTCCGACTTTGTTCCCTCTGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR-3UTR CCA 90 bp CAAAATCTAACTACTCCTCATTTGTCCTTGGCAGTTTTCTATCTTAGTCATTTGCCATACTGGCCAGGCTaGTCTCTTGGCCAGGCTGGT +
Preference number: 2 (lower is better)
Translates to: QNLTTPHLSLAVFYLSHLPYWPG*SLGQAG
Trigger: ACCAGCCTGGCCAAGAGACCAGCCTGGCCAGTATGG...CAAATGACTAAGATAGAAAACTGCCAAGGACAAATGAGGAGTAGTTAGATTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278616.8
ENST00000452508.6
ENST00000675843.1
3UTR-3UTR CCA 90 bp GGGAAAGCTATTATCTCCCTTAATCTGGACACAACTGTTCAAGCAGTCTATAATAGGGTTTCACCATACTaGCCAGGCTGGTCTCTTGGC +
Preference number: 2 (lower is better)
Translates to: GKAIISLNLDTTVQAVYNRVSPY*PGWSLG
Trigger: GCCAAGAGACCAGCCTGGCCAGTATGGTGAAACCCT...ATTATAGACTGCTTGAACAGTTGTGTCCAGATTAAGGGAGATAATAGCTTTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278616.8
ENST00000452508.6
ENST00000675843.1
3UTR-3UTR CCA 90 bp CAAAATCTAACTACTCCTCATTTGTCCTTGGCAGTTTTCTATCTTAGTCATTTGGGAGGCCGAGGAGGGTaGATCACGAGGTCAAGCGAT +
Preference number: 2 (lower is better)
Translates to: QNLTTPHLSLAVFYLSHLGGRGG*ITRSSD
Trigger: ATCGCTTGACCTCGTGATCCACCCTCCTCGGCCTCC...CAAATGACTAAGATAGAAAACTGCCAAGGACAAATGAGGAGTAGTTAGATTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278616.8
ENST00000452508.6
ENST00000675843.1
3UTR-3UTR CCA 90 bp ATCCAACTTCTTGATCATTTGCTTGAGAATACTCAGGGCAAGACTCTGCTCCTTCTGACGGAAGTGCAATaGTCCCACTGCATATTCCTC +
Preference number: 2 (lower is better)
Translates to: IQLLDHLLENTQGKTLLLLTEVQ*SHCIFL
Trigger: GAGGAATATGCAGTGGGACCATTGCACTTCCGTCAG...AAGGAGCAGAGTCTTGCCCTGAGTATTCTCAAGCAAATGATCAAGAAGTTGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR CAA 90 bp GTTGATGAGGGGATTGCTGTTTCGAGGTCATATGTTACTAGGGCTTaGCCCCACATTGCTTCGTGTTCATATGTTCGTAGTCTAGTAATG +
Preference number: 2 (lower is better)
Translates to: VDEGIAVSRSYVTRA*PHIASCSYVRSLVM
Trigger: CATTACTAGACTACGAACATATGAACACGAAGCAATGTGGGGCAAAGCCCTAGTAACATATGACCTCGAAACAGCAATCCCCTCATCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR CAA 90 bp TGCATGATGACCGCAGGATTTTCTAAGCACGTTTCTGCTAACCAGTaGCCACAAACCCTCAGACATTCTGTGTATGTAAGTTTTAGGCTG +
Preference number: 2 (lower is better)
Translates to: CMMTAGFSKHVSANQ*PQTLRHSVYVSFRL
Trigger: CAGCCTAAAACTTACATACACAGAATGTCTGAGGGTTTGTGGCAACTGGTTAGCAGAAACGTGCTTAGAAAATCCTGCGGTCATCATGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR-3UTR TCA 90 bp GGGAAAGCTATTATCTCCCTTAATCTGGACACAACTGTTCAAGCAGTCTATAATGAGGTTTCAGTGAGCTaGGATCATGCCACTGCACTC +
Preference number: 2 (lower is better)
Translates to: GKAIISLNLDTTVQAVYNEVSVS*DHATAL
Trigger: GAGTGCAGTGGCATGATCTCAGCTCACTGAAACCTC...ATTATAGACTGCTTGAACAGTTGTGTCCAGATTAAGGGAGATAATAGCTTTCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278616.8
ENST00000452508.6
ENST00000675843.1
3UTR-3UTR TCA 90 bp GGGAAAGCTATTATCTCCCTTAATCTGGACACAACTGTTCAAGCAGTCTATAATAGGCAGAGGTTTCAGTaGGCTGAGATCATGCCACTG +
Preference number: 2 (lower is better)
Translates to: GKAIISLNLDTTVQAVYNRQRFQ*AEIMPL
Trigger: CAGTGGCATGATCTCAGCTCACTGAAACCTCTGCCT...ATTATAGACTGCTTGAACAGTTGTGTCCAGATTAAGGGAGATAATAGCTTTCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278616.8
ENST00000452508.6
ENST00000675843.1
3UTR-3UTR TCA 90 bp CAGTTGCCACAAACCCTCAGACATTCTGTGTATGTAAGTTTTAGGCTGGGATTGCTGCTGATCGAACTTTaGCACAATCTTCTACCAGTG +
Preference number: 2 (lower is better)
Translates to: QLPQTLRHSVYVSFRLGLLLIEL*HNLLPV
Trigger: CACTGGTAGAAGATTGTGTCAAAGTTCGATCAGCAG...CAATCCCAGCCTAAAACTTACATACACAGAATGTCTGAGGGTTTGTGGCAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR-3UTR TCA 90 bp GTAATGCCCATGCCATCCACAATATCTCTGGTGAGTCTAAAAGGAACTGTCTCAACAGGTAACAGCTGCTaGTCGAACTTTGACACAATC +
Preference number: 2 (lower is better)
Translates to: VMPMPSTISLVSLKGTVSTGNSC*SNFDTI
Trigger: GATTGTGTCAAAGTTCGATCAGCAGCTGTTACCTGT...TGAGACAGTTCCTTTTAGACTCACCAGAGATATTGTGGATGGCATGGGCATTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR-3UTR TCA 90 bp GTAATGCCCATGCCATCCACAATATCTCTGGTGAGTCTAAAAGGAACTGTCTCAGCCATGATAGGCTCCTaGAAACTAAAATCACTGTCC +
Preference number: 2 (lower is better)
Translates to: VMPMPSTISLVSLKGTVSAMIGS*KLKSLS
Trigger: GGACAGTGATTTTAGTTTTCAGGAGCCTATCATGGC...TGAGACAGTTCCTTTTAGACTCACCAGAGATATTGTGGATGGCATGGGCATTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR-3UTR GCA 90 bp TTCAAGAACACCACTTCGCTGAGAGAGGGGAACCACCTTATAAGTACAGATAGTCAGCATCGGAAAAAGTaGTCTGACTCTGAATCCAAG +
Preference number: 2 (lower is better)
Translates to: FKNTTSLREGNHLISTDSQHRKK*SDSESK
Trigger: CTTGGATTCAGAGTCAGAGCACTTTTTCCGATGCTG...ACTATCTGTACTTATAAGGTGGTTCCCCTCTCTCAGCGAAGTGGTGTTCTTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR-3UTR GCA 90 bp GCTGGCATCCAACTTCTTGATCATTTGCTTGAGAATACTCAGGGCAAGACTCTGCTGCATATTCCTCCATaGTGCTTGGTAATGAAGTTC +
Preference number: 2 (lower is better)
Translates to: AGIQLLDHLLENTQGKTLLHIPP*CLVMKF
Trigger: GAACTTCATTACCAAGCAGCATGGAGGAATATGCAG...CAGAGTCTTGCCCTGAGTATTCTCAAGCAAATGATCAAGAAGTTGGATGCCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR-3UTR CCA 90 bp CTCAATCACCCATTTGTTAATCTCCGCAGCTGGGATGAACATTTTCCTAAGGATGCCAAAGGCAGGCAGTaGGAATTAAATGTACCTCCT +
Preference number: 2 (lower is better)
Translates to: LNHPFVNLRSWDEHFPKDAKGRQ*ELNVPP
Trigger: AGGAGGTACATTTAATTCCCACTGCCTGCCTTTGGC...ATCCTTAGGAAAATGTTCATCCCAGCTGCGGAGATTAACAAATGGGTGATTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278616.8
ENST00000452508.6
ENST00000675843.1
3UTR CAA 90 bp ATAACCTTCAAGGTCCAAATACGAGGAGAAAGCTCAATCACCCATTaGTTAATCTCCGCAGCTGGGATGAACATTTTCCTAAGGATGGAG +
Preference number: 2 (lower is better)
Translates to: ITFKVQIRGESSITH*LISAAGMNIFLRME
Trigger: CTCCATCCTTAGGAAAATGTTCATCCCAGCTGCGGAGATTAACAAATGGGTGATTGAGCTTTCTCCTCGTATTTGGACCTTGAAGGTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278616.8
ENST00000452508.6
ENST00000675843.1
3UTR-3UTR TCA 90 bp GGGAAAGCTATTATCTCCCTTAATCTGGACACAACTGTTCAAGCAGTCTATAATACTAGCACAAGGAGATaGGGAGGAAGTGTGTTTGCC +
Preference number: 2 (lower is better)
Translates to: GKAIISLNLDTTVQAVYNTSTRR*GGSVFA
Trigger: GGCAAACACACTTCCTCCTCATCTCCTTGTGCTAGT...ATTATAGACTGCTTGAACAGTTGTGTCCAGATTAAGGGAGATAATAGCTTTCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278616.8
ENST00000452508.6
ENST00000675843.1
3UTR-3UTR TCA 90 bp CTCAATCACCCATTTGTTAATCTCCGCAGCTGGGATGAACATTTTCCTAAGGATGAAAAACCAGAGAGGTaGATATGTGAGCTGATGCTG +
Preference number: 2 (lower is better)
Translates to: LNHPFVNLRSWDEHFPKDEKPER*ICELML
Trigger: CAGCATCAGCTCACATATTCACCTCTCTGGTTTTTC...ATCCTTAGGAAAATGTTCATCCCAGCTGCGGAGATTAACAAATGGGTGATTGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000278616.8
ENST00000452508.6
ENST00000675843.1
3UTR-3UTR TCA 90 bp GCTTCTTCTGGCTACCTCTGGTTTAGTCAGAAATTCATCTCTGTTTGCATTTGCACAGGTAACAGCTGCTaGTCGAACTTTGACACAATC +
Preference number: 2 (lower is better)
Translates to: ASSGYLWFSQKFISVCICTGNSC*SNFDTI
Trigger: GATTGTGTCAAAGTTCGATCAGCAGCTGTTACCTGT...GCAAATGCAAACAGAGATGAATTTCTGACTAAACCAGAGGTAGCCAGAAGAAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR-3UTR TCA 90 bp AGCATCACAAAGTGCCTCAACACTTCTGACCATCTGAGGTCTCCTACTTCTGATTCAATTCTTTGGTATTaGGTATCTGAAAACCGGGCT +
Preference number: 2 (lower is better)
Translates to: SITKCLNTSDHLRSPTSDSILWY*VSENRA
Trigger: AGCCCGGTTTTCAGATACTCAATACCAAAGAATTGA...ATCAGAAGTAGGAGACCTCAGATGGTCAGAAGTGTTGAGGCACTTTGTGATGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR-3UTR GCA 90 bp GGGAAAGCTATTATCTCCCTTAATCTGGACACAACTGTTCAAGCAGTCTATAATAGGAGGAAGTGTGTTTaGCTTGGCCTGGGAAATCTC +
Preference number: 2 (lower is better)
Translates to: GKAIISLNLDTTVQAVYNRRKCV*LGLGNL
Trigger: GAGATTTCCCAGGCCAAGGCAAACACACTTCCTCCT...ATTATAGACTGCTTGAACAGTTGTGTCCAGATTAAGGGAGATAATAGCTTTCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278616.8
ENST00000452508.6
ENST00000675843.1
3UTR-3UTR GCA 90 bp GTTTACGATCCTCTTTCAGTGCACGCAGGGCTAATTCATCCAACTCCAGCTCTCTTTAATTTGAAATATTaGCCTTTCAGGGAGCTGAGT +
Preference number: 2 (lower is better)
Translates to: VYDPLSVHAGLIHPTPALFNLKY*PFRELS
Trigger: ACTCAGCTCCCTGAAAGGGCAATATTTCAAATTAAA...GAGAGCTGGAGTTGGATGAATTAGCCCTGCGTGCACTGAAAGAGGATCGTAAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR-3UTR CCA 90 bp ATTAGAATACTTGAACAGAACAGGAGCCTCATAGCATACCATGCAAGGCTAAAGGCCAAAGGCAGGCAGTaGGAATTAAATGTACCTCCT +
Preference number: 2 (lower is better)
Translates to: IRILEQNRSLIAYHARLKAKGRQ*ELNVPP
Trigger: AGGAGGTACATTTAATTCCCACTGCCTGCCTTTGGC...CTTTAGCCTTGCATGGTATGCTATGAGGCTCCTGTTCTGTTCAAGTATTCTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278616.8
ENST00000452508.6
ENST00000675843.1
3UTR CAA 90 bp ATGAACTCTGGTTTACTTGGGTTTTCTTCTGCCACTGTCAACTCCTaGACGATGGAGATGGTATTTTTCAACTGTAATTCCGGCTCTGAT +
Preference number: 2 (lower is better)
Translates to: MNSGLLGFSSATVNS*TMEMVFFNCNSGSD
Trigger: ATCAGAGCCGGAATTACAGTTGAAAAATACCATCTCCATCGTCAAGGAGTTGACAGTGGCAGAAGAAAACCCAAGTAAACCAGAGTTCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530958.5
3UTR-3UTR TCA 90 bp GGGAAAGCTATTATCTCCCTTAATCTGGACACAACTGTTCAAGCAGTCTATAATAGAGAGGTGAATATGTaGGCTGATGCTGTAGCTGTC +
Preference number: 2 (lower is better)
Translates to: GKAIISLNLDTTVQAVYNREVNM*ADAVAV
Trigger: GACAGCTACAGCATCAGCTCACATATTCACCTCTCT...ATTATAGACTGCTTGAACAGTTGTGTCCAGATTAAGGGAGATAATAGCTTTCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278616.8
ENST00000452508.6
ENST00000675843.1
3UTR-3UTR TCA 90 bp GAGATTATACTCACTAATACACGAGTCAGTAGTTTTACTTTCAGGTGGCTTTTTGAGGTTTCAGTGAGCTaGGATCATGCCACTGCACTC +
Preference number: 2 (lower is better)
Translates to: EIILTNTRVSSFTFRWLFEVSVS*DHATAL
Trigger: GAGTGCAGTGGCATGATCTCAGCTCACTGAAACCTC...AAAAAGCCACCTGAAAGTAAAACTACTGACTCGTGTATTAGTGAGTATAATCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000278616.8
ENST00000452508.6
ENST00000675843.1
3UTR-3UTR TCA 90 bp TCCTCTTTGGCTCTTTTCAGGAGAGCTTGCTTGTTTTCAAATTCCGATGATTTCGGTAGGTCAGCATTATaGAGGTCCACTGAAGTTCTT +
Preference number: 2 (lower is better)
Translates to: SSLALFRRACLFSNSDDFGRSAL*RSTEVL
Trigger: AAGAACTTCAGTGGACCTTCATAATGCTGACCTACC...GAAATCATCGGAATTTGAAAACAAGCAAGCTCTCCTGAAAAGAGCCAAAGAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR-3UTR TCA 90 bp GTAATGCCCATGCCATCCACAATATCTCTGGTGAGTCTAAAAGGAACTGTCTCAGGCCTGTATCTTTTATaGGCACCATCTTCATTGTTA +
Preference number: 2 (lower is better)
Translates to: VMPMPSTISLVSLKGTVSGLYLL*APSSLL
Trigger: TAACAATGAAGATGGTGCTCATAAAAGATACAGGCC...TGAGACAGTTCCTTTTAGACTCACCAGAGATATTGTGGATGGCATGGGCATTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR-3UTR TCA 90 bp GTTCCAGCTATTCAGAAGGCTGAGACAGGAGAATTCCTTGTACCCAGGAATTCACAGTTAGATGAGAAATaGGGGTCTGAACTAAATGAT +
Preference number: 2 (lower is better)
Translates to: VPAIQKAETGEFLVPRNSQLDEK*GSELND
Trigger: ATCATTTAGTTCAGACCCTCATTTCTCATCTAACTG...TGAATTCCTGGGTACAAGGAATTCTCCTGTCTCAGCCTTCTGAATAGCTGGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531525.2
3UTR-3UTR GCA 90 bp CAAAATCTAACTACTCCTCATTTGTCCTTGGCAGTTTTCTATCTTAGTCATTTGTCACCCAGGCTGGAGTaGAATGGCATGATTTTGGCC +
Preference number: 2 (lower is better)
Translates to: QNLTTPHLSLAVFYLSHLSPRLE*NGMILA
Trigger: GGCCAAAATCATGCCATTGCACTCCAGCCTGGGTGA...CAAATGACTAAGATAGAAAACTGCCAAGGACAAATGAGGAGTAGTTAGATTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000278616.8
ENST00000452508.6
ENST00000675843.1
3UTR-3UTR GCA 90 bp GAGATTATACTCACTAATACACGAGTCAGTAGTTTTACTTTCAGGTGGCTTTTTACCTCCTTCCACCCCTaGCATAAAGGTGGGACACAT +
Preference number: 2 (lower is better)
Translates to: EIILTNTRVSSFTFRWLFTSFHP*HKGGTH
Trigger: ATGTGTCCCACCTTTATGGCAGGGGTGGAAGGAGGT...AAAAAGCCACCTGAAAGTAAAACTACTGACTCGTGTATTAGTGAGTATAATCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000278616.8
ENST00000452508.6
ENST00000675843.1
3UTR-3UTR TCA 90 bp GAGATTATACTCACTAATACACGAGTCAGTAGTTTTACTTTCAGGTGGCTTTTTACTAGCACAAGGAGATaGGGAGGAAGTGTGTTTGCC +
Preference number: 2 (lower is better)
Translates to: EIILTNTRVSSFTFRWLFTSTRR*GGSVFA
Trigger: GGCAAACACACTTCCTCCTCATCTCCTTGTGCTAGT...AAAAAGCCACCTGAAAGTAAAACTACTGACTCGTGTATTAGTGAGTATAATCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000278616.8
ENST00000452508.6
ENST00000675843.1
3UTR-3UTR TCA 90 bp CAAAATCTAACTACTCCTCATTTGTCCTTGGCAGTTTTCTATCTTAGTCATTTGACTAGCACAAGGAGATaGGGAGGAAGTGTGTTTGCC +
Preference number: 2 (lower is better)
Translates to: QNLTTPHLSLAVFYLSHLTSTRR*GGSVFA
Trigger: GGCAAACACACTTCCTCCTCATCTCCTTGTGCTAGT...CAAATGACTAAGATAGAAAACTGCCAAGGACAAATGAGGAGTAGTTAGATTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278616.8
ENST00000452508.6
ENST00000675843.1
3UTR-3UTR TCA 90 bp GGGAAAGCTATTATCTCCCTTAATCTGGACACAACTGTTCAAGCAGTCTATAATGAAAAACCAGAGAGGTaGATATGTGAGCTGATGCTG +
Preference number: 2 (lower is better)
Translates to: GKAIISLNLDTTVQAVYNEKPER*ICELML
Trigger: CAGCATCAGCTCACATATTCACCTCTCTGGTTTTTC...ATTATAGACTGCTTGAACAGTTGTGTCCAGATTAAGGGAGATAATAGCTTTCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000278616.8
ENST00000452508.6
ENST00000675843.1
3UTR-3UTR TCA 90 bp ATTAGAATACTTGAACAGAACAGGAGCCTCATAGCATACCATGCAAGGCTAAAGGAGATCAAATATGAATaGGTGCCTGCCATTGGCAAT +
Preference number: 2 (lower is better)
Translates to: IRILEQNRSLIAYHARLKEIKYE*VPAIGN
Trigger: ATTGCCAATGGCAGGCACTCATTCATATTTGATCTC...CTTTAGCCTTGCATGGTATGCTATGAGGCTCCTGTTCTGTTCAAGTATTCTAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278616.8
ENST00000452508.6
ENST00000675843.1
3UTR-3UTR TCA 90 bp TCTAAGCACGTTTCTGCTAACCAGTTGCCACAAACCCTCAGACATTCTGTGTATTATGGAAGTACAGTCTaGCAAAAGTCAGTTTTCACT +
Preference number: 2 (lower is better)
Translates to: SKHVSANQLPQTLRHSVYYGSTV*QKSVFT
Trigger: AGTGAAAACTGACTTTTGTCAGACTGTACTTCCATA...ATACACAGAATGTCTGAGGGTTTGTGGCAACTGGTTAGCAGAAACGTGCTTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR-3UTR TCA 90 bp GTAATGCCCATGCCATCCACAATATCTCTGGTGAGTCTAAAAGGAACTGTCTCAGACTCCACAGCTAACTaGATTGTACTGTTTAATTTG +
Preference number: 2 (lower is better)
Translates to: VMPMPSTISLVSLKGTVSDSTAN*IVLFNL
Trigger: CAAATTAAACAGTACAATTCAGTTAGCTGTGGAGTC...TGAGACAGTTCCTTTTAGACTCACCAGAGATATTGTGGATGGCATGGGCATTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR-3UTR TCA 90 bp AGCCAGAGGGAACAAAGTCGGAATACCCACATATCATGTTCTTCTCCACTTAATTCAATTCTTTGGTATTaGGTATCTGAAAACCGGGCT +
Preference number: 2 (lower is better)
Translates to: SQREQSRNTHISCSSPLNSILWY*VSENRA
Trigger: AGCCCGGTTTTCAGATACTCAATACCAAAGAATTGA...ATTAAGTGGAGAAGAACATGATATGTGGGTATTCCGACTTTGTTCCCTCTGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR-3UTR TCA 90 bp TTCAAGAACACCACTTCGCTGAGAGAGGGGAACCACCTTATAAGTACAGATAGTGTGTATCTGTTTGTCTaGATTTTATGTTCCCTAAGG +
Preference number: 2 (lower is better)
Translates to: FKNTTSLREGNHLISTDSVYLFV*ILCSLR
Trigger: CCTTAGGGAACATAAAATTCAGACAAACAGATACAC...ACTATCTGTACTTATAAGGTGGTTCCCCTCTCTCAGCGAAGTGGTGTTCTTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR-3UTR TCA 90 bp ACTGTCTCAGGAGTAGGAAGGATTTTGCCCTGTTCAAAAGCAACACCTAGATCTATGTACAAGTTCTGCTaGCTGCTCATTTATCAAGAT +
Preference number: 2 (lower is better)
Translates to: TVSGVGRILPCSKATPRSMYKFC*LLIYQD
Trigger: ATCTTGATAAATGAGCAGTCAGCAGAACTTGTACAT...AGATCTAGGTGTTGCTTTTGAACAGGGCAAAATCCTTCCTACTCCTGAGACAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR-3UTR GCA 90 bp ACTGTCTCAGGAGTAGGAAGGATTTTGCCCTGTTCAAAAGCAACACCTAGATCTACATATTATTCTATTTaGAGCCTCTGTTCGATCCTC +
Preference number: 2 (lower is better)
Translates to: TVSGVGRILPCSKATPRSTYYSI*SLCSIL
Trigger: GAGGATCGAACAGAGGCTGCAAATAGAATAATATGT...AGATCTAGGTGTTGCTTTTGAACAGGGCAAAATCCTTCCTACTCCTGAGACAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR-3UTR CCA 90 bp ATTAGAATACTTGAACAGAACAGGAGCCTCATAGCATACCATGCAAGGCTAAAGGTTAATCTCCGCAGCTaGGATGAACATTTTCCTAAG +
Preference number: 2 (lower is better)
Translates to: IRILEQNRSLIAYHARLKVNLRS*DEHFPK
Trigger: CTTAGGAAAATGTTCATCCCAGCTGCGGAGATTAAC...CTTTAGCCTTGCATGGTATGCTATGAGGCTCCTGTTCTGTTCAAGTATTCTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278616.8
ENST00000452508.6
ENST00000675843.1
3UTR-3UTR CCA 90 bp TTCAAGAACACCACTTCGCTGAGAGAGGGGAACCACCTTATAAGTACAGATAGTAATTGGCTGGTCTGCTaGAATATTTATGCCTTTTCT +
Preference number: 2 (lower is better)
Translates to: FKNTTSLREGNHLISTDSNWLVC*NIYAFS
Trigger: AGAAAAGGCATAAATATTCCAGCAGACCAGCCAATT...ACTATCTGTACTTATAAGGTGGTTCCCCTCTCTCAGCGAAGTGGTGTTCTTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR-3UTR TCA 90 bp GAGATTATACTCACTAATACACGAGTCAGTAGTTTTACTTTCAGGTGGCTTTTTTGCGCCCAGCCCGAATaGCCATTATTTCTAAAGAGT +
Preference number: 2 (lower is better)
Translates to: EIILTNTRVSSFTFRWLFCAQPE*PLFLKS
Trigger: ACTCTTTAGAAATAATGGTCATTCGGGCTGGGCGCA...AAAAAGCCACCTGAAAGTAAAACTACTGACTCGTGTATTAGTGAGTATAATCTC
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000278616.8
ENST00000452508.6
ENST00000675843.1
3UTR-3UTR TCA 90 bp ATCTTCATTCCGTCTCTCTTCATCATGCCATTGACTTCAGAAACTCCAGAATTTCTGGTGAAAAATCCCTaGACATGTGTAGAAAGCAGA +
Preference number: 2 (lower is better)
Translates to: IFIPSLFIMPLTSETPEFLVKNP*TCVESR
Trigger: TCTGCTTTCTACACATGTTCAGGGATTTTTCACCAG...AAATTCTGGAGTTTCTGAAGTCAATGGCATGATGAAGAGAGACGGAATGAAGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR-3UTR GCA 90 bp GCTTTAAATGACTGTATAGTCACCAGATTTCCATATTCTCCTGTGTGGTCCACCGCCATCTTGGATAACTaGAACAAATTGACAACTAGT +
Preference number: 2 (lower is better)
Translates to: ALNDCIVTRFPYSPVWSTAILDN*NKLTTS
Trigger: ACTAGTTGTCAATTTGTTGCAGTTATCCAAGATGGC...GGTGGACCACACAGGAGAATATGGAAATCTGGTGACTATACAGTCATTTAAAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR-3UTR GCA 90 bp GCTTCTTCTGGCTACCTCTGGTTTAGTCAGAAATTCATCTCTGTTTGCATTTGCGCCATCTTGGATAACTaGAACAAATTGACAACTAGT +
Preference number: 2 (lower is better)
Translates to: ASSGYLWFSQKFISVCICAILDN*NKLTTS
Trigger: ACTAGTTGTCAATTTGTTGCAGTTATCCAAGATGGC...GCAAATGCAAACAGAGATGAATTTCTGACTAAACCAGAGGTAGCCAGAAGAAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR-3UTR GCA 90 bp GCTAACCAGTTGCCACAAACCCTCAGACATTCTGTGTATGTAAGTTTTAGGCTGTTTAATTTGAAATATTaGCCTTTCAGGGAGCTGAGT +
Preference number: 2 (lower is better)
Translates to: ANQLPQTLRHSVYVSFRLFNLKY*PFRELS
Trigger: ACTCAGCTCCCTGAAAGGGCAATATTTCAAATTAAA...CAGCCTAAAACTTACATACACAGAATGTCTGAGGGTTTGTGGCAACTGGTTAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR-3UTR GCA 90 bp GAATATTCAGAGGAGAGTAGCATAAAACCTAGGTCACGTGAGCTGAAGAAAGTGAAGCGTGCGCCACAATaGCCAATTAATTTTTGTATT +
Preference number: 2 (lower is better)
Translates to: EYSEESSIKPRSRELKKVKRAPQ*PINFCI
Trigger: AATACAAAAATTAATTGGGCATTGTGGCGCACGCTT...CACTTTCTTCAGCTCACGTGACCTAGGTTTTATGCTACTCTCCTCTGAATATTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638443.1
3UTR-3UTR CCA 90 bp GGGAAAGCTATTATCTCCCTTAATCTGGACACAACTGTTCAAGCAGTCTATAATGTTAATCTCCGCAGCTaGGATGAACATTTTCCTAAG +
Preference number: 2 (lower is better)
Translates to: GKAIISLNLDTTVQAVYNVNLRS*DEHFPK
Trigger: CTTAGGAAAATGTTCATCCCAGCTGCGGAGATTAAC...ATTATAGACTGCTTGAACAGTTGTGTCCAGATTAAGGGAGATAATAGCTTTCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278616.8
ENST00000452508.6
ENST00000675843.1
3UTR-3UTR CCA 90 bp ACTGTCTCAGGAGTAGGAAGGATTTTGCCCTGTTCAAAAGCAACACCTAGATCTATTCTAGCAGCCAATTaGTACATAAGAGGCAAAAAT +
Preference number: 2 (lower is better)
Translates to: TVSGVGRILPCSKATPRSILAAN*YIRGKN
Trigger: ATTTTTGCCTCTTATGTACCAATTGGCTGCTAGAAT...AGATCTAGGTGTTGCTTTTGAACAGGGCAAAATCCTTCCTACTCCTGAGACAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR CAA 90 bp GTGTTCTTGAAAGTTCTGGCCAGTATAGAGAGTTCTACAAGGTGTTaGGTGAGAATGTCCTTAATACATTCTCTTTGTGAGTTGTCCATT +
Preference number: 2 (lower is better)
Translates to: VFLKVLASIESSTRC*VRMSLIHSLCELSI
Trigger: AATGGACAACTCACAAAGAGAATGTATTAAGGACATTCTCACCAAACACCTTGTAGAACTCTCTATACTGGCCAGAACTTTCAAGAACAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR-3UTR TCA 90 bp CAAAATCTAACTACTCCTCATTTGTCCTTGGCAGTTTTCTATCTTAGTCATTTGGAAAAACCAGAGAGGTaGATATGTGAGCTGATGCTG +
Preference number: 2 (lower is better)
Translates to: QNLTTPHLSLAVFYLSHLEKPER*ICELML
Trigger: CAGCATCAGCTCACATATTCACCTCTCTGGTTTTTC...CAAATGACTAAGATAGAAAACTGCCAAGGACAAATGAGGAGTAGTTAGATTTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000278616.8
ENST00000452508.6
ENST00000675843.1
3UTR-3UTR GCA 90 bp ATTAGAATACTTGAACAGAACAGGAGCCTCATAGCATACCATGCAAGGCTAAAGATCAATCAAATATTCTaGCCACTAGCACAAGGAGAT +
Preference number: 2 (lower is better)
Translates to: IRILEQNRSLIAYHARLKINQIF*PLAQGD
Trigger: ATCTCCTTGTGCTAGTGGGCAGAATATTTGATTGAT...CTTTAGCCTTGCATGGTATGCTATGAGGCTCCTGTTCTGTTCAAGTATTCTAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278616.8
ENST00000452508.6
ENST00000675843.1
3UTR-3UTR TCA 90 bp GGGAAAGCTATTATCTCCCTTAATCTGGACACAACTGTTCAAGCAGTCTATAATTGCAAAGTAATATTCTaGACAGTTCTCCAGAAGTCA +
Preference number: 2 (lower is better)
Translates to: GKAIISLNLDTTVQAVYNCKVIF*TVLQKS
Trigger: TGACTTCTGGAGAACTGTTCAGAATATTACTTTGCA...ATTATAGACTGCTTGAACAGTTGTGTCCAGATTAAGGGAGATAATAGCTTTCCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278616.8
ENST00000452508.6
ENST00000675843.1
3UTR-3UTR TCA 90 bp GGGAAAGCTATTATCTCCCTTAATCTGGACACAACTGTTCAAGCAGTCTATAATCTATTTGGTTTTCATTaGCCTTTTGAGCAACTGACT +
Preference number: 2 (lower is better)
Translates to: GKAIISLNLDTTVQAVYNLFGFH*PFEQLT
Trigger: AGTCAGTTGCTCAAAAGGTCAATGAAAACCAAATAG...ATTATAGACTGCTTGAACAGTTGTGTCCAGATTAAGGGAGATAATAGCTTTCCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278616.8
ENST00000452508.6
ENST00000675843.1
3UTR-3UTR GCA 90 bp ATTAGAATACTTGAACAGAACAGGAGCCTCATAGCATACCATGCAAGGCTAAAGTCCTATCAGTATTTATaGTACACTTCAGGTATGGAA +
Preference number: 2 (lower is better)
Translates to: IRILEQNRSLIAYHARLKSYQYL*YTSGME
Trigger: TTCCATACCTGAAGTGTAGCATAAATACTGATAGGA...CTTTAGCCTTGCATGGTATGCTATGAGGCTCCTGTTCTGTTCAAGTATTCTAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278616.8
ENST00000452508.6
ENST00000675843.1
3UTR-3UTR GCA 90 bp GGGAAAGCTATTATCTCCCTTAATCTGGACACAACTGTTCAAGCAGTCTATAATTCCTATCAGTATTTATaGTACACTTCAGGTATGGAA +
Preference number: 2 (lower is better)
Translates to: GKAIISLNLDTTVQAVYNSYQYL*YTSGME
Trigger: TTCCATACCTGAAGTGTAGCATAAATACTGATAGGA...ATTATAGACTGCTTGAACAGTTGTGTCCAGATTAAGGGAGATAATAGCTTTCCC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278616.8
ENST00000452508.6
ENST00000675843.1
3UTR-3UTR TCA 90 bp TGGTCCACCTTAATTTCCATAGTAGGGACAACAACATCTTCTAAATTCTTAAGTAAGCAGATTTCTCCATaGTTCATTTGTATCTTGGAG +
Preference number: 2 (lower is better)
Translates to: WSTLISIVGTTTSSKFLSKQISP*FICILE
Trigger: CTCCAAGATACAAATGAATCATGGAGAAATCTGCTT...ACTTAAGAATTTAGAAGATGTTGTTGTCCCTACTATGGAAATTAAGGTGGACCA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR-3UTR GCA 90 bp TGGTCCACCTTAATTTCCATAGTAGGGACAACAACATCTTCTAAATTCTTAAGTACATATTATTCTATTTaGAGCCTCTGTTCGATCCTC +
Preference number: 2 (lower is better)
Translates to: WSTLISIVGTTTSSKFLSTYYSI*SLCSIL
Trigger: GAGGATCGAACAGAGGCTGCAAATAGAATAATATGT...ACTTAAGAATTTAGAAGATGTTGTTGTCCCTACTATGGAAATTAAGGTGGACCA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR CCA 72 bp GGAGCAAAGAACCCAGGGCTTGCCAAAGGCAGGCAGTaGGAATTAAATGTACCTCCTTCCACCCCTGCCATA +
Preference number: 3 (lower is better)
Translates to: GAKNPGLAKGRQ*ELNVPPSTPAI
Trigger: TATGGCAGGGGTGGAAGGAGGTACATTTAATTCCCACTGCCTGCCTTTGGCAAGCCCTGGGTTCTTTGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278616.8
ENST00000452508.6
ENST00000675843.1
3UTR CCA 72 bp AGTGCTCTGACTCTGAATCCAAGTTTGCAGGGGTTGTaGATCGGCTCGTTTGCGAGAAGTGTCGAAGACAGC +
Preference number: 3 (lower is better)
Translates to: SALTLNPSLQGL*IGSFARSVEDS
Trigger: GCTGTCTTCGACACTTCTCGCAAACGAGCCGATCCACAACCCCTGCAAACTTGGATTCAGAGTCAGAGCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR GCA 72 bp GAATCCAAGTTTGCAGGGGTTGTGGATCGGCTCGTTTaGGAGAAGTGTCGAAGACAGCTGGTGAAAAATCCC +
Preference number: 3 (lower is better)
Translates to: ESKFAGVVDRLV*EKCRRQLVKNP
Trigger: GGGATTTTTCACCAGCTGTCTTCGACACTTCTCGCAAACGAGCCGATCCACAACCCCTGCAAACTTGGATTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR-3UTR CAA 90 bp GCTAACCAGTTGCCACAAACCCTCAGACATTCTGTGTATGTAAGTTTTAGGCTGCCAAGTTTGCAGGGGTaGTGGATCGGCTCGTTTGCG +
Preference number: 3 (lower is better)
Translates to: ANQLPQTLRHSVYVSFRLPSLQG*WIGSFA
Trigger: CGCAAACGAGCCGATCCACAACCCCTGCAAACTTGG...CAGCCTAAAACTTACATACACAGAATGTCTGAGGGTTTGTGGCAACTGGTTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR-3UTR CAA 90 bp CAGTTGCCACAAACCCTCAGACATTCTGTGTATGTAAGTTTTAGGCTGGGATTGCCAAGTTTGCAGGGGTaGTGGATCGGCTCGTTTGCG +
Preference number: 3 (lower is better)
Translates to: QLPQTLRHSVYVSFRLGLPSLQG*WIGSFA
Trigger: CGCAAACGAGCCGATCCACAACCCCTGCAAACTTGG...CAATCCCAGCCTAAAACTTACATACACAGAATGTCTGAGGGTTTGTGGCAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR-3UTR CAA 90 bp CACCAATGGGGACAGTTCCTGTGCACCATTCAAGAACACCACTTCGCTGAGAGATATGTTACTAGGGCTTaGCCCCACATTGCTTCGTGT +
Preference number: 3 (lower is better)
Translates to: HQWGQFLCTIQEHHFAERYVTRA*PHIASC
Trigger: ACACGAAGCAATGTGGGGCAAAGCCCTAGTAACATA...TCTCTCAGCGAAGTGGTGTTCTTGAATGGTGCACAGGAACTGTCCCCATTGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR-3UTR CAA 90 bp GATCTTGAGAAAAGCTCCCCAATGCTTTCCAGCTCTCCAATGGCCTGCAACCTGTATGTTACTAGGGCTTaGCCCCACATTGCTTCGTGT +
Preference number: 3 (lower is better)
Translates to: DLEKSSPMLSSSPMACNLYVTRA*PHIASC
Trigger: ACACGAAGCAATGTGGGGCAAAGCCCTAGTAACATA...CAGGTTGCAGGCCATTGGAGAGCTGGAAAGCATTGGGGAGCTTTTCTCAAGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR-3UTR CAA 90 bp GTTTACGATCCTCTTTCAGTGCACGCAGGGCTAATTCATCCAACTCCAGCTCTCTTTTGCCCAGAATACTaGTGCTTCTTCCAGCTGCCA +
Preference number: 3 (lower is better)
Translates to: VYDPLSVHAGLIHPTPALFCPEY*CFFQLP
Trigger: TGGCAGCTGGAAGAAGCACAAGTATTCTGGGCAAAA...GAGAGCTGGAGTTGGATGAATTAGCCCTGCGTGCACTGAAAGAGGATCGTAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR-3UTR CAA 90 bp GTTTACGATCCTCTTTCAGTGCACGCAGGGCTAATTCATCCAACTCCAGCTCTCAGACCTACTTCCTCTTaGGCTCTTTTCAGGAGAGCT +
Preference number: 3 (lower is better)
Translates to: VYDPLSVHAGLIHPTPALRPTSS*ALFRRA
Trigger: AGCTCTCCTGAAAAGAGCCAAAGAGGAAGTAGGTCT...GAGAGCTGGAGTTGGATGAATTAGCCCTGCGTGCACTGAAAGAGGATCGTAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR-3UTR CAA 90 bp GTTTACGATCCTCTTTCAGTGCACGCAGGGCTAATTCATCCAACTCCAGCTCTCGCTGCTGATCGAACTTaGACACAATCTTCTACCAGT +
Preference number: 3 (lower is better)
Translates to: VYDPLSVHAGLIHPTPALAADRT*TQSSTS
Trigger: ACTGGTAGAAGATTGTGTCAAAGTTCGATCAGCAGC...GAGAGCTGGAGTTGGATGAATTAGCCCTGCGTGCACTGAAAGAGGATCGTAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR-3UTR CAA 90 bp GATCTTGAGAAAAGCTCCCCAATGCTTTCCAGCTCTCCAATGGCCTGCAACCTGGTAGATAGGCCAGCATaGGATCTGTTGTCATCTTAT +
Preference number: 3 (lower is better)
Translates to: DLEKSSPMLSSSPMACNLVDRPA*DLLSSY
Trigger: ATAAGATGACAACAGATCCAATGCTGGCCTATCTAC...CAGGTTGCAGGCCATTGGAGAGCTGGAAAGCATTGGGGAGCTTTTCTCAAGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR-3UTR CAA 90 bp GTAATGCCCATGCCATCCACAATATCTCTGGTGAGTCTAAAAGGAACTGTCTCATTCCTGCCTGGCGTGTaGATGAGGGGATTGCTGTTT +
Preference number: 3 (lower is better)
Translates to: VMPMPSTISLVSLKGTVSFLPGV*MRGLLF
Trigger: AAACAGCAATCCCCTCATCAACACGCCAGGCAGGAA...TGAGACAGTTCCTTTTAGACTCACCAGAGATATTGTGGATGGCATGGGCATTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR-3UTR CAA 90 bp CTCAATCACCCATTTGTTAATCTCCGCAGCTGGGATGAACATTTTCCTAAGGATGAGGAGGAAGTGTGTTaGCCTTGGCCTGGGAAATCT +
Preference number: 3 (lower is better)
Translates to: LNHPFVNLRSWDEHFPKDEEEVC*PWPGKS
Trigger: AGATTTCCCAGGCCAAGGCAAACACACTTCCTCCTC...ATCCTTAGGAAAATGTTCATCCCAGCTGCGGAGATTAACAAATGGGTGATTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278616.8
ENST00000452508.6
ENST00000675843.1
3UTR-3UTR CAA 90 bp CTTCCCTCCACCACAGCCATACAAACTATCTGGCTCCCCTATACTTCTGTAGATCACCAGTGTGGTTTATaGCCATCTTGGATAACTGCA +
Preference number: 3 (lower is better)
Translates to: LPSTTAIQTIWLPYTSVDHQCGL*PSWITA
Trigger: TGCAGTTATCCAAGATGGCAATAAACCACACTGGTG...ATCTACAGAAGTATAGGGGAGCCAGATAGTTTGTATGGCTGTGGTGGAGGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR-3UTR CAA 90 bp CACCAATGGGGACAGTTCCTGTGCACCATTCAAGAACACCACTTCGCTGAGAGAGAAGAATTTCACATTTaGTGCCTCCACTGTCCAAAA +
Preference number: 3 (lower is better)
Translates to: HQWGQFLCTIQEHHFAEREEFHI*CLHCPK
Trigger: TTTTGGACAGTGGAGGCACAAAATGTGAAATTCTTC...TCTCTCAGCGAAGTGGTGTTCTTGAATGGTGCACAGGAACTGTCCCCATTGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR-3UTR CAA 90 bp ATTGTTCGCTGCACAGCTGGCATCCAACTTCTTGATCATTTGCTTGAGAATACTTGTGGATCGGCTCGTTaGCGAGAAGTGTCGAAGACA +
Preference number: 3 (lower is better)
Translates to: IVRCTAGIQLLDHLLENTCGSAR*REVSKT
Trigger: TGTCTTCGACACTTCTCGCAAACGAGCCGATCCACA...AGTATTCTCAAGCAAATGATCAAGAAGTTGGATGCCAGCTGTGCAGCGAACAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR-3UTR CAA 90 bp GCTTTAAATGACTGTATAGTCACCAGATTTCCATATTCTCCTGTGTGGTCCACCTGTGGATCGGCTCGTTaGCGAGAAGTGTCGAAGACA +
Preference number: 3 (lower is better)
Translates to: ALNDCIVTRFPYSPVWSTCGSAR*REVSKT
Trigger: TGTCTTCGACACTTCTCGCAAACGAGCCGATCCACA...GGTGGACCACACAGGAGAATATGGAAATCTGGTGACTATACAGTCATTTAAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR-3UTR CAA 90 bp CACCAATGGGGACAGTTCCTGTGCACCATTCAAGAACACCACTTCGCTGAGAGATTCTTGATCATTTGCTaGAGAATACTCAGGGCAAGA +
Preference number: 3 (lower is better)
Translates to: HQWGQFLCTIQEHHFAERFLIIC*RILRAR
Trigger: TCTTGCCCTGAGTATTCTCAAGCAAATGATCAAGAA...TCTCTCAGCGAAGTGGTGTTCTTGAATGGTGCACAGGAACTGTCCCCATTGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR TCA 72 bp CATCAATCAAATATTCTGCCCACTAGCACAAGGAGATaGGGAGGAAGTGTGTTTGCCTTGGCCTGGGAAATC +
Preference number: 3 (lower is better)
Translates to: HQSNILPTSTRR*GGSVFALAWEI
Trigger: GATTTCCCAGGCCAAGGCAAACACACTTCCTCCTCATCTCCTTGTGCTAGTGGGCAGAATATTTGATTGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278616.8
ENST00000452508.6
ENST00000675843.1
3UTR TCA 72 bp CGTTTGCATTCTTGGTCATCTGCATTCAGAGTAGGGTaGAGCTCAGTTTCATCTTCCGGCCTCTGCTGTAAA +
Preference number: 3 (lower is better)
Translates to: RLHSWSSAFRVG*SSVSSSGLCCK
Trigger: TTTACAGCAGAGGCCGGAAGATGAAACTGAGCTTCACCCTACTCTGAATGCAGATGACCAAGAATGCAAACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR-3UTR CAA 90 bp ATTAGAATACTTGAACAGAACAGGAGCCTCATAGCATACCATGCAAGGCTAAAGGAGGAGGAAGTGTGTTaGCCTTGGCCTGGGAAATCT +
Preference number: 3 (lower is better)
Translates to: IRILEQNRSLIAYHARLKEEEVC*PWPGKS
Trigger: AGATTTCCCAGGCCAAGGCAAACACACTTCCTCCTC...CTTTAGCCTTGCATGGTATGCTATGAGGCTCCTGTTCTGTTCAAGTATTCTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278616.8
ENST00000452508.6
ENST00000675843.1
3UTR-3UTR CAA 90 bp GCACAGCTGGCATCCAACTTCTTGATCATTTGCTTGAGAATACTCAGGGCAAGACACCAGTGTGGTTTATaGCCATCTTGGATAACTGCA +
Preference number: 3 (lower is better)
Translates to: AQLASNFLIICLRILRARHQCGL*PSWITA
Trigger: TGCAGTTATCCAAGATGGCAATAAACCACACTGGTG...TCTTGCCCTGAGTATTCTCAAGCAAATGATCAAGAAGTTGGATGCCAGCTGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR-3UTR CAA 90 bp GCTGGCATCCAACTTCTTGATCATTTGCTTGAGAATACTCAGGGCAAGACTCTGGCTGCTGATCGAACTTaGACACAATCTTCTACCAGT +
Preference number: 3 (lower is better)
Translates to: AGIQLLDHLLENTQGKTLAADRT*TQSSTS
Trigger: ACTGGTAGAAGATTGTGTCAAAGTTCGATCAGCAGC...CAGAGTCTTGCCCTGAGTATTCTCAAGCAAATGATCAAGAAGTTGGATGCCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR-3UTR CAA 90 bp CCAGAATTTTCAAGCCAGAGGGAACAAAGTCGGAATACCCACATATCATGTTCTGGGCTTTGCCCCACATaGCTTCGTGTTCATATGTTC +
Preference number: 3 (lower is better)
Translates to: PEFSSQREQSRNTHISCSGLCPT*LRVHMF
Trigger: GAACATATGAACACGAAGCAATGTGGGGCAAAGCCC...AGAACATGATATGTGGGTATTCCGACTTTGTTCCCTCTGGCTTGAAAATTCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR-3UTR CAA 90 bp TTGTTCGCTGCACAGCTGGCATCCAACTTCTTGATCATTTGCTTGAGAATACTCGTGTTGATGAGGGGATaGCTGTTTCGAGGTCATATG +
Preference number: 3 (lower is better)
Translates to: LFAAQLASNFLIICLRILVLMRG*LFRGHM
Trigger: CATATGACCTCGAAACAGCAATCCCCTCATCAACAC...GAGTATTCTCAAGCAAATGATCAAGAAGTTGGATGCCAGCTGTGCAGCGAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR-3UTR CAA 90 bp CAAGCCAGAGGGAACAAAGTCGGAATACCCACATATCATGTTCTTCTCCACTTAGTTCCTTCTACTTCTTaGCTGACGGAAGTGCAATGG +
Preference number: 3 (lower is better)
Translates to: QARGNKVGIPTYHVLLHLVPSTS*LTEVQW
Trigger: CCATTGCACTTCCGTCAGCAAAGAAGTAGAAGGAAC...TAAGTGGAGAAGAACATGATATGTGGGTATTCCGACTTTGTTCCCTCTGGCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR-3UTR CAA 90 bp TTCAAGAACACCACTTCGCTGAGAGAGGGGAACCACCTTATAAGTACAGATAGTGTTTCTGCTAACCAGTaGCCACAAACCCTCAGACAT +
Preference number: 3 (lower is better)
Translates to: FKNTTSLREGNHLISTDSVSANQ*PQTLRH
Trigger: ATGTCTGAGGGTTTGTGGCAACTGGTTAGCAGAAAC...ACTATCTGTACTTATAAGGTGGTTCCCCTCTCTCAGCGAAGTGGTGTTCTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR-3UTR CAA 90 bp ACCTGTTGCATGACAGCATCTTGTCTCAGGTCATCACGGCCCTTAACAAGCTGTTTCAGGAGAGCTTGCTaGTTTTCAAATTCCGATGAT +
Preference number: 3 (lower is better)
Translates to: TCCMTASCLRSSRPLTSCFRRAC*FSNSDD
Trigger: ATCATCGGAATTTGAAAACAAGCAAGCTCTCCTGAA...ACAGCTTGTTAAGGGCCGTGATGACCTGAGACAAGATGCTGTCATGCAACAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR-3UTR CAA 90 bp CAAGCCAGAGGGAACAAAGTCGGAATACCCACATATCATGTTCTTCTCCACTTAAGACCTACTTCCTCTTaGGCTCTTTTCAGGAGAGCT +
Preference number: 3 (lower is better)
Translates to: QARGNKVGIPTYHVLLHLRPTSS*ALFRRA
Trigger: AGCTCTCCTGAAAAGAGCCAAAGAGGAAGTAGGTCT...TAAGTGGAGAAGAACATGATATGTGGGTATTCCGACTTTGTTCCCTCTGGCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR-3UTR CAA 90 bp ACCTGTTGCATGACAGCATCTTGTCTCAGGTCATCACGGCCCTTAACAAGCTGTGAAATTCATCTCTGTTaGCATTTGCTAAGGCCAGTA +
Preference number: 3 (lower is better)
Translates to: TCCMTASCLRSSRPLTSCEIHLC*HLLRPV
Trigger: TACTGGCCTTAGCAAATGCAAACAGAGATGAATTTC...ACAGCTTGTTAAGGGCCGTGATGACCTGAGACAAGATGCTGTCATGCAACAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR TCA 72 bp AGGGGAATGAAAAACCAGAGAGGTGAATATGTGAGCTaGTGCTGTAGCTGTCCTGGAACAATTTGCCAGTCT +
Preference number: 3 (lower is better)
Translates to: RGMKNQRGEYVS*CCSCPGTICQS
Trigger: AGACTGGCAAATTGTTCCAGGACAGCTACAGCATCAGCTCACATATTCACCTCTCTGGTTTTTCATTCCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000278616.8
ENST00000452508.6
ENST00000675843.1
3UTR TCA 72 bp TCCAAAATGACTGTGCGTAGAGCCATGATAGGCTCCTaGAAACTAAAATCACTGTCCTTGAGAAGCTGGGAG +
Preference number: 3 (lower is better)
Translates to: SKMTVRRAMIGS*KLKSLSLRSWE
Trigger: CTCCCAGCTTCTCAAGGACAGTGATTTTAGTTTTCAGGAGCCTATCATGGCTCTACGCACAGTCATTTTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR CCA 72 bp CTAGCACAAGGAGATGAGGAGGAAGTGTGTTTGCCTTaGCCTGGGAAATCTCCTATCAGTATTTATGCTACA +
Preference number: 3 (lower is better)
Translates to: LAQGDEEEVCLP*PGKSPISIYAT
Trigger: TGTAGCATAAATACTGATAGGAGATTTCCCAGGCCAAGGCAAACACACTTCCTCCTCATCTCCTTGTGCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278616.8
ENST00000452508.6
ENST00000675843.1
3UTR-3UTR CAA 90 bp GCTTCTTCTGGCTACCTCTGGTTTAGTCAGAAATTCATCTCTGTTTGCATTTGCGTGTTGATGAGGGGATaGCTGTTTCGAGGTCATATG +
Preference number: 3 (lower is better)
Translates to: ASSGYLWFSQKFISVCICVLMRG*LFRGHM
Trigger: CATATGACCTCGAAACAGCAATCCCCTCATCAACAC...GCAAATGCAAACAGAGATGAATTTCTGACTAAACCAGAGGTAGCCAGAAGAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR-3UTR CAA 90 bp TCTAAGCACGTTTCTGCTAACCAGTTGCCACAAACCCTCAGACATTCTGTGTATCTAAAATCACTGTCCTaGAGAAGCTGGGAGTGTTTC +
Preference number: 3 (lower is better)
Translates to: SKHVSANQLPQTLRHSVYLKSLS*RSWECF
Trigger: GAAACACTCCCAGCTTCTCAAGGACAGTGATTTTAG...ATACACAGAATGTCTGAGGGTTTGTGGCAACTGGTTAGCAGAAACGTGCTTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR-3UTR CAA 90 bp GCTTTAAATGACTGTATAGTCACCAGATTTCCATATTCTCCTGTGTGGTCCACCTTTTGCCCAGAATACTaGTGCTTCTTCCAGCTGCCA +
Preference number: 3 (lower is better)
Translates to: ALNDCIVTRFPYSPVWSTFCPEY*CFFQLP
Trigger: TGGCAGCTGGAAGAAGCACAAGTATTCTGGGCAAAA...GGTGGACCACACAGGAGAATATGGAAATCTGGTGACTATACAGTCATTTAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR TCA 72 bp CAGGCTGGCCTGAGTGCAGTGGTGTTTACAACGAATTaGTCACAACCAGTTACAGATTTCTTTGTTCCTTCT +
Preference number: 3 (lower is better)
Translates to: QAGLSAVVFTTN*SQPVTDFFVPS
Trigger: AGAAGGAACAAAGAAATCTGTAACTGGTTGTGATCAATTCGTTGTAAACACCACTGCACTCAGGCCAGCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638443.1
3UTR CCA 72 bp GTTTCCGTGTTTCTCTGCAGTAATGTATTACACATCTaGAAGACCTGTTGCATGACAGCATCTTGTCTCAGG +
Preference number: 3 (lower is better)
Translates to: VSVFLCSNVLHI*KTCCMTASCLR
Trigger: CCTGAGACAAGATGCTGTCATGCAACAGGTCTTCCAGATGTGTAATACATTACTGCAGAGAAACACGGAAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR-3UTR CAA 90 bp CTAAGCACGTTTCTGCTAACCAGTTGCCACAAACCCTCAGACATTCTGTGTATGGAAGAATTTCACATTTaGTGCCTCCACTGTCCAAAA +
Preference number: 3 (lower is better)
Translates to: LSTFLLTSCHKPSDILCMEEFHI*CLHCPK
Trigger: TTTTGGACAGTGGAGGCACAAAATGTGAAATTCTTC...CATACACAGAATGTCTGAGGGTTTGTGGCAACTGGTTAGCAGAAACGTGCTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR-3UTR CAA 90 bp TCTAAGCACGTTTCTGCTAACCAGTTGCCACAAACCCTCAGACATTCTGTGTATCAACTTCTTGATCATTaGCTTGAGAATACTCAGGGC +
Preference number: 3 (lower is better)
Translates to: SKHVSANQLPQTLRHSVYQLLDH*LENTQG
Trigger: GCCCTGAGTATTCTCAAGCAAATGATCAAGAAGTTG...ATACACAGAATGTCTGAGGGTTTGTGGCAACTGGTTAGCAGAAACGTGCTTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR-3UTR CAA 90 bp GCTAACCAGTTGCCACAAACCCTCAGACATTCTGTGTATGTAAGTTTTAGGCTGCAACTTCTTGATCATTaGCTTGAGAATACTCAGGGC +
Preference number: 3 (lower is better)
Translates to: ANQLPQTLRHSVYVSFRLQLLDH*LENTQG
Trigger: GCCCTGAGTATTCTCAAGCAAATGATCAAGAAGTTG...CAGCCTAAAACTTACATACACAGAATGTCTGAGGGTTTGTGGCAACTGGTTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR-3UTR CAA 90 bp TCCTCTTTGGCTCTTTTCAGGAGAGCTTGCTTGTTTTCAAATTCCGATGATTTCGTTTCTGCTAACCAGTaGCCACAAACCCTCAGACAT +
Preference number: 3 (lower is better)
Translates to: SSLALFRRACLFSNSDDFVSANQ*PQTLRH
Trigger: ATGTCTGAGGGTTTGTGGCAACTGGTTAGCAGAAAC...GAAATCATCGGAATTTGAAAACAAGCAAGCTCTCCTGAAAAGAGCCAAAGAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR-3UTR CAA 90 bp GTTCCAGCTATTCAGAAGGCTGAGACAGGAGAATTCCTTGTACCCAGGAATTCATTAGTCCTTCAAGTCTaGTCAATGGAAGTGCATCAT +
Preference number: 3 (lower is better)
Translates to: VPAIQKAETGEFLVPRNSLVLQV*SMEVHH
Trigger: ATGATGCACTTCCATTGACAAGACTTGAAGGACTAA...TGAATTCCTGGGTACAAGGAATTCTCCTGTCTCAGCCTTCTGAATAGCTGGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531525.2
3UTR TCA 72 bp AGAATGGGCTTGTGTGCAGCAACAGCCCTGGGAATATaGCATAAACAGACACTCAAGATTCCCATAGATAAA +
Preference number: 3 (lower is better)
Translates to: RMGLCAATALGI*HKQTLKIPIDK
Trigger: TTTATCTATGGGAATCTTGAGTGTCTGTTTATGTCATATTCCCAGGGCTGTTGCTGCACACAAGCCCATTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278616.8
ENST00000452508.6
ENST00000675843.1
3UTR TCA 72 bp TGCGAGAAGTGTCGAAGACAGCTGGTGAAAAATCCCTaGACATGTGTAGAAAGCAGATTTCTCCATGATTCA +
Preference number: 3 (lower is better)
Translates to: CEKCRRQLVKNP*TCVESRFLHDS
Trigger: TGAATCATGGAGAAATCTGCTTTCTACACATGTTCAGGGATTTTTCACCAGCTGTCTTCGACACTTCTCGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR GCA 72 bp TTTGCCTTGGCCTGGGAAATCTCCTATCAGTATTTATaGTACACTTCAGGTATGGAAACCCTAAAGCCAAGA +
Preference number: 3 (lower is better)
Translates to: FALAWEISYQYL*YTSGMETLKPR
Trigger: TCTTGGCTTTAGGGTTTCCATACCTGAAGTGTAGCATAAATACTGATAGGAGATTTCCCAGGCCAAGGCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278616.8
ENST00000452508.6
ENST00000675843.1
3UTR GCA 72 bp GCACATTATGAACTCTGGTTTACTTGGGTTTTCTTCTaGCACTGTCAACTCCTTGACGATGGAGATGGTATT +
Preference number: 3 (lower is better)
Translates to: AHYELWFTWVFF*HCQLLDDGDGI
Trigger: AATACCATCTCCATCGTCAAGGAGTTGACAGTGGCAGAAGAAAACCCAAGTAAACCAGAGTTCATAATGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530958.5
3UTR CCA 72 bp GTCTGTATCACAGCACATTATGAACTCTGGTTTACTTaGGTTTTCTTCTGCCACTGTCAACTCCTTGACGAT +
Preference number: 3 (lower is better)
Translates to: VCITAHYELWFT*VFFCHCQLLDD
Trigger: ATCGTCAAGGAGTTGACAGTGGCAGAAGAAAACCCAAGTAAACCAGAGTTCATAATGTGCTGTGATACAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530958.5
3UTR-3UTR CAA 90 bp ATCCAACTTCTTGATCATTTGCTTGAGAATACTCAGGGCAAGACTCTGCTCCTTCCAGCATTGGATCTGTaGTCATCTTATAAATCTCCC +
Preference number: 3 (lower is better)
Translates to: IQLLDHLLENTQGKTLLLPALDL*SSYKSP
Trigger: GGGAGATTTATAAGATGACAACAGATCCAATGCTGG...AAGGAGCAGAGTCTTGCCCTGAGTATTCTCAAGCAAATGATCAAGAAGTTGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR-3UTR CAA 90 bp AGCCAGAGGGAACAAAGTCGGAATACCCACATATCATGTTCTTCTCCACTTAATGTAGATAGGCCAGCATaGGATCTGTTGTCATCTTAT +
Preference number: 3 (lower is better)
Translates to: SQREQSRNTHISCSSPLNVDRPA*DLLSSY
Trigger: ATAAGATGACAACAGATCCAATGCTGGCCTATCTAC...ATTAAGTGGAGAAGAACATGATATGTGGGTATTCCGACTTTGTTCCCTCTGGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR-3UTR CAA 90 bp AGCATCACAAAGTGCCTCAACACTTCTGACCATCTGAGGTCTCCTACTTCTGATTACATATTATTCTATTaGCAGCCTCTGTTCGATCCT +
Preference number: 3 (lower is better)
Translates to: SITKCLNTSDHLRSPTSDYILFY*QPLFDP
Trigger: AGGATCGAACAGAGGCTGCAAATAGAATAATATGTA...ATCAGAAGTAGGAGACCTCAGATGGTCAGAAGTGTTGAGGCACTTTGTGATGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR TCA 72 bp CATAAAGGTGGGACACATGGAAGCTTATACTCTCAGTaGAAAAGGCATCAATCAAATATTCTGCCCACTAGC +
Preference number: 3 (lower is better)
Translates to: HKGGTHGSLYSQ*KRHQSNILPTS
Trigger: GCTAGTGGGCAGAATATTTGATTGATGCCTTTTTCACTGAGAGTATAAGCTTCCATGTGTCCCACCTTTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278616.8
ENST00000452508.6
ENST00000675843.1
3UTR GCA 72 bp AGGTCTCCTACTTCTGATAGTACATATTATTCTATTTaGAGCCTCTGTTCGATCCTCATCAAGCTGAGAGCT +
Preference number: 3 (lower is better)
Translates to: RSPTSDSTYYSI*SLCSILIKLRA
Trigger: AGCTCTCAGCTTGATGAGGATCGAACAGAGGCTGCAAATAGAATAATATGTACTATCAGAAGTAGGAGACCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR CCA 72 bp GCCTCTGCTGTAAATACAAAGCTTTCAAAGGATTCATaGTCCAGTCAAAGAGTGGATCATATAGAAGGACCT +
Preference number: 3 (lower is better)
Translates to: ASAVNTKLSKDS*SSQRVDHIEGP
Trigger: AGGTCCTTCTATATGATCCACTCTTTGACTGGACCATGAATCCTTTGAAAGCTTTGTATTTACAGCAGAGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR CCA 72 bp CCCAAATATGTCTGTATCACAGCACATTATGAACTCTaGTTTACTTGGGTTTTCTTCTGCCACTGTCAACTC +
Preference number: 3 (lower is better)
Translates to: PKYVCITAHYEL*FTWVFFCHCQL
Trigger: GAGTTGACAGTGGCAGAAGAAAACCCAAGTAAACCAGAGTTCATAATGTGCTGTGATACAGACATATTTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530958.5
3UTR-3UTR CAA 90 bp AAAGGCATCAATCAAATATTCTGCCCACTAGCACAAGGAGATGAGGAGGAAGTGCCCATAGATAAAGCCTaGCTGAAAATAAACTCACTT +
Preference number: 3 (lower is better)
Translates to: KGINQIFCPLAQGDEEEVPIDKA*LKINSL
Trigger: AAGTGAGTTTATTTTCAGCAAGGCTTTATCTATGGG...CACTTCCTCCTCATCTCCTTGTGCTAGTGGGCAGAATATTTGATTGATGCCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278616.8
ENST00000452508.6
ENST00000675843.1
3UTR-3UTR CAA 90 bp CAAAATCTAACTACTCCTCATTTGTCCTTGGCAGTTTTCTATCTTAGTCATTTGGGAAGTGTGTTTGCCTaGGCCTGGGAAATCTCCTAT +
Preference number: 3 (lower is better)
Translates to: QNLTTPHLSLAVFYLSHLGSVFA*AWEISY
Trigger: ATAGGAGATTTCCCAGGCCAAGGCAAACACACTTCC...CAAATGACTAAGATAGAAAACTGCCAAGGACAAATGAGGAGTAGTTAGATTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278616.8
ENST00000452508.6
ENST00000675843.1
3UTR-3UTR CAA 90 bp GAGATTATACTCACTAATACACGAGTCAGTAGTTTTACTTTCAGGTGGCTTTTTGGAAGTGTGTTTGCCTaGGCCTGGGAAATCTCCTAT +
Preference number: 3 (lower is better)
Translates to: EIILTNTRVSSFTFRWLFGSVFA*AWEISY
Trigger: ATAGGAGATTTCCCAGGCCAAGGCAAACACACTTCC...AAAAAGCCACCTGAAAGTAAAACTACTGACTCGTGTATTAGTGAGTATAATCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000278616.8
ENST00000452508.6
ENST00000675843.1
3UTR-3UTR CAA 90 bp TCCTCTTTGGCTCTTTTCAGGAGAGCTTGCTTGTTTTCAAATTCCGATGATTTCCCAGCATTGGATCTGTaGTCATCTTATAAATCTCCC +
Preference number: 3 (lower is better)
Translates to: SSLALFRRACLFSNSDDFPALDL*SSYKSP
Trigger: GGGAGATTTATAAGATGACAACAGATCCAATGCTGG...GAAATCATCGGAATTTGAAAACAAGCAAGCTCTCCTGAAAAGAGCCAAAGAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR-3UTR CAA 90 bp TTGTTCGCTGCACAGCTGGCATCCAACTTCTTGATCATTTGCTTGAGAATACTCTCAAAAGGGTTTTCTTaGTCAAATCTGGGTACTTCT +
Preference number: 3 (lower is better)
Translates to: LFAAQLASNFLIICLRILSKGFS*SNLGTS
Trigger: AGAAGTACCCAGATTTGACAAAGAAAACCCTTTTGA...GAGTATTCTCAAGCAAATGATCAAGAAGTTGGATGCCAGCTGTGCAGCGAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR-3UTR CAA 90 bp CAGTTGCCACAAACCCTCAGACATTCTGTGTATGTAAGTTTTAGGCTGGGATTGTCAAAAGGGTTTTCTTaGTCAAATCTGGGTACTTCT +
Preference number: 3 (lower is better)
Translates to: QLPQTLRHSVYVSFRLGLSKGFS*SNLGTS
Trigger: AGAAGTACCCAGATTTGACAAAGAAAACCCTTTTGA...CAATCCCAGCCTAAAACTTACATACACAGAATGTCTGAGGGTTTGTGGCAACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR-3UTR CAA 90 bp TTCAAGAACACCACTTCGCTGAGAGAGGGGAACCACCTTATAAGTACAGATAGTAGTTCTACAAGGTGTTaGGTGAGAATGTCCTTAATA +
Preference number: 3 (lower is better)
Translates to: FKNTTSLREGNHLISTDSSSTRC*VRMSLI
Trigger: TATTAAGGACATTCTCACCAAACACCTTGTAGAACT...ACTATCTGTACTTATAAGGTGGTTCCCCTCTCTCAGCGAAGTGGTGTTCTTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR-3UTR CAA 90 bp CCAGAATTTTCAAGCCAGAGGGAACAAAGTCGGAATACCCACATATCATGTTCTTTCTTGATCATTTGCTaGAGAATACTCAGGGCAAGA +
Preference number: 3 (lower is better)
Translates to: PEFSSQREQSRNTHISCSFLIIC*RILRAR
Trigger: TCTTGCCCTGAGTATTCTCAAGCAAATGATCAAGAA...AGAACATGATATGTGGGTATTCCGACTTTGTTCCCTCTGGCTTGAAAATTCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR-3UTR CAA 90 bp ATCCAACTTCTTGATCATTTGCTTGAGAATACTCAGGGCAAGACTCTGCTCCTTCTGGCATCCAACTTCTaGATCATTTGCTTGAGAATA +
Preference number: 3 (lower is better)
Translates to: IQLLDHLLENTQGKTLLLLASNF*IICLRI
Trigger: TATTCTCAAGCAAATGATCAAGAAGTTGGATGCCAG...AAGGAGCAGAGTCTTGCCCTGAGTATTCTCAAGCAAATGATCAAGAAGTTGGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR-3UTR CAA 90 bp GCTTCTTCTGGCTACCTCTGGTTTAGTCAGAAATTCATCTCTGTTTGCATTTGCTCTTTTCAGGAGAGCTaGCTTGTTTTCAAATTCCGA +
Preference number: 3 (lower is better)
Translates to: ASSGYLWFSQKFISVCICSFQES*LVFKFR
Trigger: TCGGAATTTGAAAACAAGCAAGCTCTCCTGAAAAGA...GCAAATGCAAACAGAGATGAATTTCTGACTAAACCAGAGGTAGCCAGAAGAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR-3UTR CAA 90 bp GAATATTCAGAGGAGAGTAGCATAAAACCTAGGTCACGTGAGCTGAAGAAAGTGCAGTTACAGATTTCTTaGTTCCTTCTAAACTCCCAC +
Preference number: 3 (lower is better)
Translates to: EYSEESSIKPRSRELKKVQLQIS*FLLNSH
Trigger: GTGGGAGTTTAGAAGGAACAAAGAAATCTGTAACTG...CACTTTCTTCAGCTCACGTGACCTAGGTTTTATGCTACTCTCCTCTGAATATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638443.1
3UTR-3UTR CAA 90 bp CTCCTACTTCTGATAGTACATATTATTCTATTTGCAGCCTCTGTTCGATCCTCACTCTTCATCATGCCATaGACTTCAGAAACTCCAGAA +
Preference number: 3 (lower is better)
Translates to: LLLLIVHIILFAASVRSSLFIMP*TSETPE
Trigger: TTCTGGAGTTTCTGAAGTCAATGGCATGATGAAGAG...TGAGGATCGAACAGAGGCTGCAAATAGAATAATATGTACTATCAGAAGTAGGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR TCA 72 bp TATAGAAGGACCTCTACAATGGTTAACAGAGTTTCCTaGGAGTTTCTCATCACTTCCATGGTTTTCTCACAG +
Preference number: 3 (lower is better)
Translates to: YRRTSTMVNRVS*EFLITSMVFSQ
Trigger: CTGTGAGAAAACCATGGAAGTGATGAGAAACTCTCAGGAAACTCTGTTAACCATTGTAGAGGTCCTTCTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR CCA 72 bp CTTCCAACAGCCTCTAGAACTTCTTTTTCACCAGTGTaGTTTATTGCCATCTTGGATAACTGCAACAAATTG +
Preference number: 3 (lower is better)
Translates to: LPTASRTSFSPV*FIAILDNCNKL
Trigger: CAATTTGTTGCAGTTATCCAAGATGGCAATAAACCACACTGGTGAAAAAGAAGTTCTAGAGGCTGTTGGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR-3UTR CAA 90 bp GGGAAAGCTATTATCTCCCTTAATCTGGACACAACTGTTCAAGCAGTCTATAATACTCCTCATTTGTCCTaGGCAGTTTTCTATCTTAGT +
Preference number: 3 (lower is better)
Translates to: GKAIISLNLDTTVQAVYNTPHLS*AVFYLS
Trigger: ACTAAGATAGAAAACTGCCAAGGACAAATGAGGAGT...ATTATAGACTGCTTGAACAGTTGTGTCCAGATTAAGGGAGATAATAGCTTTCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278616.8
ENST00000452508.6
ENST00000675843.1
3UTR-3UTR CAA 90 bp GGGAAAGCTATTATCTCCCTTAATCTGGACACAACTGTTCAAGCAGTCTATAATCTAACTACTCCTCATTaGTCCTTGGCAGTTTTCTAT +
Preference number: 3 (lower is better)
Translates to: GKAIISLNLDTTVQAVYNLTTPH*SLAVFY
Trigger: ATAGAAAACTGCCAAGGACAAATGAGGAGTAGTTAG...ATTATAGACTGCTTGAACAGTTGTGTCCAGATTAAGGGAGATAATAGCTTTCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278616.8
ENST00000452508.6
ENST00000675843.1
3UTR-3UTR CAA 90 bp AACCTCCAAGTGGTTCAAGGATCAACTGTAAACCTGGCATATTTGAGACTTTCATGGTTTATTGCCATCTaGGATAACTGCAACAAATTG +
Preference number: 3 (lower is better)
Translates to: NLQVVQGSTVNLAYLRLSWFIAI*DNCNKL
Trigger: CAATTTGTTGCAGTTATCCAAGATGGCAATAAACCA...TGAAAGTCTCAAATATGCCAGGTTTACAGTTGATCCTTGAACCACTTGGAGGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675595.1
3UTR-3UTR CAA 90 bp CTCCTACTTCTGATAGTACATATTATTCTATTTGCAGCCTCTGTTCGATCCTCAGAAATTCATCTCTGTTaGCATTTGCTAAGGCCAGTA +
Preference number: 3 (lower is better)
Translates to: LLLLIVHIILFAASVRSSEIHLC*HLLRPV
Trigger: TACTGGCCTTAGCAAATGCAAACAGAGATGAATTTC...TGAGGATCGAACAGAGGCTGCAAATAGAATAATATGTACTATCAGAAGTAGGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR GCA 72 bp CTAAAATCACTGTCCTTGAGAAGCTGGGAGTGTTTCTaGCACTTAATATATACTTCAGAGAGTTGTCTATGT +
Preference number: 3 (lower is better)
Translates to: LKSLSLRSWECF*HLIYTSESCLC
Trigger: ACATAGACAACTCTCTGAAGTATATATTAAGTGGCAGAAACACTCCCAGCTTCTCAAGGACAGTGATTTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR CCA 72 bp CTCATTAAGACACGTTCAGCTACTTTGTTGAAACTCTaGTCAATATCACTGAGATTTCGTTTGCATTCTTGG +
Preference number: 3 (lower is better)
Translates to: LIKTRSATLLKL*SISLRFRLHSW
Trigger: CCAAGAATGCAAACGAAATCTCAGTGATATTGACCAGAGTTTCAACAAAGTAGCTGAACGTGTCTTAATGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR-3UTR CAA 90 bp ATCTTCATTCCGTCTCTCTTCATCATGCCATTGACTTCAGAAACTCCAGAATTTTGGTTTATTGCCATCTaGGATAACTGCAACAAATTG +
Preference number: 3 (lower is better)
Translates to: IFIPSLFIMPLTSETPEFWFIAI*DNCNKL
Trigger: CAATTTGTTGCAGTTATCCAAGATGGCAATAAACCA...AAATTCTGGAGTTTCTGAAGTCAATGGCATGATGAAGAGAGACGGAATGAAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR TCA 72 bp CTTCTACCAGTGTGTTATTCAGGTAGGTCAGCATTATaGAGGTCCACTGAAGTTCTTTATCTTCAAATAACT +
Preference number: 3 (lower is better)
Translates to: LLPVCYSGRSAL*RSTEVLYLQIT
Trigger: AGTTATTTGAAGATAAAGAACTTCAGTGGACCTTCATAATGCTGACCTACCTGAATAACACACTGGTAGAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR-3UTR CAA 90 bp CAAAATCTAACTACTCCTCATTTGTCCTTGGCAGTTTTCTATCTTAGTCATTTGCCCATAGATAAAGCCTaGCTGAAAATAAACTCACTT +
Preference number: 3 (lower is better)
Translates to: QNLTTPHLSLAVFYLSHLPIDKA*LKINSL
Trigger: AAGTGAGTTTATTTTCAGCAAGGCTTTATCTATGGG...CAAATGACTAAGATAGAAAACTGCCAAGGACAAATGAGGAGTAGTTAGATTTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000278616.8
ENST00000452508.6
ENST00000675843.1
3UTR-3UTR CAA 90 bp GAGATTATACTCACTAATACACGAGTCAGTAGTTTTACTTTCAGGTGGCTTTTTCCCATAGATAAAGCCTaGCTGAAAATAAACTCACTT +
Preference number: 3 (lower is better)
Translates to: EIILTNTRVSSFTFRWLFPIDKA*LKINSL
Trigger: AAGTGAGTTTATTTTCAGCAAGGCTTTATCTATGGG...AAAAAGCCACCTGAAAGTAAAACTACTGACTCGTGTATTAGTGAGTATAATCTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000278616.8
ENST00000452508.6
ENST00000675843.1
3UTR CCA 72 bp AGCCAATTGGTACATAAGAGGCAAAAATTTATATGTTaGAATCTTCATTCCGTCTCTCTTCATCATGCCATT +
Preference number: 3 (lower is better)
Translates to: SQLVHKRQKFIC*NLHSVSLHHAI
Trigger: AATGGCATGATGAAGAGAGACGGAATGAAGATTCCAACATATAAATTTTTGCCTCTTATGTACCAATTGGCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR TCA 72 bp TCTGACAAGAGAATTCATGAACTAGAAGGCAATCTATaGAGTTATCACAGAAAGATAACATACATGGACAGT +
Preference number: 3 (lower is better)
Translates to: SDKRIHELEGNL*SYHRKITYMDS
Trigger: ACTGTCCATGTATGTTATCTTTCTGTGATAACTTCATAGATTGCCTTCTAGTTCATGAATTCTCTTGTCAGA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278616.8
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CCA 90 bp AGGCAGGCAGTGGGAATTAAATGTACCTCCTTCCACCCCTGCCATAAAGGTGGGTATCAACCGCGGCGGTaGCTGCAGCGCAGATCCCGA +
Preference number: 4 (lower is better)
Translates to: RQAVGIKCTSFHPCHKGGYQPRR*LQRRSR
Trigger: TCGGGATCTGCGCTGCAGCCACCGCCGCGGTTGATA...CCCACCTTTATGGCAGGGGTGGAAGGAGGTACATTTAATTCCCACTGCCTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR GCA 90 bp GCACAGCTGGCATCCAACTTCTTGATCATTTGCTTGAGAATACTCAGGGCAAGAAACCGCGGCGGTGGCTaGAGCGCAGATCCCGACTCC +
Preference number: 4 (lower is better)
Translates to: AQLASNFLIICLRILRARNRGGG*SADPDS
Trigger: GGAGTCGGGATCTGCGCTGCAGCCACCGCCGCGGTT...TCTTGCCCTGAGTATTCTCAAGCAAATGATCAAGAAGTTGGATGCCAGCTGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR GCA 90 bp CTAAGCACGTTTCTGCTAACCAGTTGCCACAAACCCTCAGACATTCTGTGTATGAACCGCGGCGGTGGCTaGAGCGCAGATCCCGACTCC +
Preference number: 4 (lower is better)
Translates to: LSTFLLTSCHKPSDILCMNRGGG*SADPDS
Trigger: GGAGTCGGGATCTGCGCTGCAGCCACCGCCGCGGTT...CATACACAGAATGTCTGAGGGTTTGTGGCAACTGGTTAGCAGAAACGTGCTTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp AGGCAGGCAGTGGGAATTAAATGTACCTCCTTCCACCCCTGCCATAAAGGTGGGTCTGCAAGGCCTGAATaGTTCCTGCCTGGCGTGTTG +
Preference number: 4 (lower is better)
Translates to: RQAVGIKCTSFHPCHKGGSARPE*FLPGVL
Trigger: CAACACGCCAGGCAGGAATCATTCAGGCCTTGCAGA...CCCACCTTTATGGCAGGGGTGGAAGGAGGTACATTTAATTCCCACTGCCTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CCA 90 bp TCTTCCCTCCACCACAGCCATACAAACTATCTGGCTCCCCTATACTTCTGTAGATATCAACCGCGGCGGTaGCTGCAGCGCAGATCCCGA +
Preference number: 4 (lower is better)
Translates to: SSLHHSHTNYLAPLYFCRYQPRR*LQRRSR
Trigger: TCGGGATCTGCGCTGCAGCCACCGCCGCGGTTGATA...TCTACAGAAGTATAGGGGAGCCAGATAGTTTGTATGGCTGTGGTGGAGGGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp TCTTTGCTGACGGAAGTGCAATGGTCCCACTGCATATTCCTCCATGCTGCTTGGTCTGCAAGGCCTGAATaGTTCCTGCCTGGCGTGTTG +
Preference number: 4 (lower is better)
Translates to: SLLTEVQWSHCIFLHAAWSARPE*FLPGVL
Trigger: CAACACGCCAGGCAGGAATCATTCAGGCCTTGCAGA...CCAAGCAGCATGGAGGAATATGCAGTGGGACCATTGCACTTCCGTCAGCAAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR GCA 90 bp AGGCAGGCAGTGGGAATTAAATGTACCTCCTTCCACCCCTGCCATAAAGGTGGGTCACCCAGGCTGGAGTaGAATGGCATGATTTTGGCC +
Preference number: 4 (lower is better)
Translates to: RQAVGIKCTSFHPCHKGGSPRLE*NGMILA
Trigger: GGCCAAAATCATGCCATTGCACTCCAGCCTGGGTGA...CCCACCTTTATGGCAGGGGTGGAAGGAGGTACATTTAATTCCCACTGCCTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR GCA 90 bp CTCAATCACCCATTTGTTAATCTCCGCAGCTGGGATGAACATTTTCCTAAGGATAACCGCGGCGGTGGCTaGAGCGCAGATCCCGACTCC +
Preference number: 4 (lower is better)
Translates to: LNHPFVNLRSWDEHFPKDNRGGG*SADPDS
Trigger: GGAGTCGGGATCTGCGCTGCAGCCACCGCCGCGGTT...ATCCTTAGGAAAATGTTCATCCCAGCTGCGGAGATTAACAAATGGGTGATTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CCA 90 bp CAGGCAGTGGGAATTAAATGTACCTCCTTCCACCCCTGCCATAAAGGTGGGACAAGGGTTTCACCATACTaGCCAGGCTGGTCTCTTGGC +
Preference number: 4 (lower is better)
Translates to: QAVGIKCTSFHPCHKGGTRVSPY*PGWSLG
Trigger: GCCAAGAGACCAGCCTGGCCAGTATGGTGAAACCCT...TGTCCCACCTTTATGGCAGGGGTGGAAGGAGGTACATTTAATTCCCACTGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp CTACTAGGAAGGCTGAGGCACGAGAATCTGAGCTCAGGAGGTGGAGGTTGCAGTAGGATCCAAATCCCCTaGAAAGTCACAGAGGTCAGT +
Preference number: 4 (lower is better)
Translates to: LLGRLRHENLSSGGGGCSRIQIP*KVTEVS
Trigger: ACTGACCTCTGTGACTTTTCAGGGGATTTGGATCCT...ACTGCAACCTCCACCTCCTGAGCTCAGATTCTCGTGCCTCAGCCTTCCTAGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531525.2
CDS-3UTR TCA 90 bp AGGCAGGCAGTGGGAATTAAATGTACCTCCTTCCACCCCTGCCATAAAGGTGGGGCCCTTTCAGGGAGCTaGGTGTTCTTGAAAGTTCTG +
Preference number: 4 (lower is better)
Translates to: RQAVGIKCTSFHPCHKGGALSGS*VFLKVL
Trigger: CAGAACTTTCAAGAACACTCAGCTCCCTGAAAGGGC...CCCACCTTTATGGCAGGGGTGGAAGGAGGTACATTTAATTCCCACTGCCTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR GCA 90 bp AGGCAGGCAGTGGGAATTAAATGTACCTCCTTCCACCCCTGCCATAAAGGTGGGGTAGCAGTCTCTCTTTaGTGTGCCATCCCACTGTCT +
Preference number: 4 (lower is better)
Translates to: RQAVGIKCTSFHPCHKGGVAVSL*CAIPLS
Trigger: AGACAGTGGGATGGCACAGCAAAGAGAGACTGCTAC...CCCACCTTTATGGCAGGGGTGGAAGGAGGTACATTTAATTCCCACTGCCTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR GCA 90 bp CAGGCAGTGGGAATTAAATGTACCTCCTTCCACCCCTGCCATAAAGGTGGGACAGCTGGGATTGTTCGCTaGACAGCTGGCATCCAACTT +
Preference number: 4 (lower is better)
Translates to: QAVGIKCTSFHPCHKGGTAGIVR*TAGIQL
Trigger: AAGTTGGATGCCAGCTGTGCAGCGAACAATCCCAGC...TGTCCCACCTTTATGGCAGGGGTGGAAGGAGGTACATTTAATTCCCACTGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR GCA 90 bp AGGCAGGCAGTGGGAATTAAATGTACCTCCTTCCACCCCTGCCATAAAGGTGGGGCTGTCTCCTCTCCTTaGCATCGGAACCTACACAAT +
Preference number: 4 (lower is better)
Translates to: RQAVGIKCTSFHPCHKGGAVSSP*HRNLHN
Trigger: ATTGTGTAGGTTCCGATGGCAAGGAGAGGAGACAGC...CCCACCTTTATGGCAGGGGTGGAAGGAGGTACATTTAATTCCCACTGCCTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR GCA 90 bp AGGCAGGCAGTGGGAATTAAATGTACCTCCTTCCACCCCTGCCATAAAGGTGGGTGGGGACAGTTCCTGTaGACCATTCAAGAACACCAC +
Preference number: 4 (lower is better)
Translates to: RQAVGIKCTSFHPCHKGGWGQFL*TIQEHH
Trigger: GTGGTGTTCTTGAATGGTGCACAGGAACTGTCCCCA...CCCACCTTTATGGCAGGGGTGGAAGGAGGTACATTTAATTCCCACTGCCTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR GCA 90 bp CAGGCAGTGGGAATTAAATGTACCTCCTTCCACCCCTGCCATAAAGGTGGGACAACCTCCTTCCACCCCTaGCATAAAGGTGGGACACAT +
Preference number: 4 (lower is better)
Translates to: QAVGIKCTSFHPCHKGGTTSFHP*HKGGTH
Trigger: ATGTGTCCCACCTTTATGGCAGGGGTGGAAGGAGGT...TGTCCCACCTTTATGGCAGGGGTGGAAGGAGGTACATTTAATTCCCACTGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR GCA 90 bp TCACTTAGGAACAGAGAAGCTTCAGCCTGCAGTGAGCTATCATCACACCATTGCGAGCAGGGGGAGGACTaGTTGAGGCCAGGAGTTCAA +
Preference number: 4 (lower is better)
Translates to: SLRNREASACSELSSHHCEQGED*LRPGVQ
Trigger: TTGAACTCCTGGCCTCAAGCAGTCCTCCCCCTGCTC...GCAATGGTGTGATGATAGCTCACTGCAGGCTGAAGCTTCTCTGTTCCTAAGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638443.1
CDS-3UTR CCA 90 bp CTCCACCACAGCCATACAAACTATCTGGCTCCCCTATACTTCTGTAGATTTCTATATCAACCGCGGCGGTaGCTGCAGCGCAGATCCCGA +
Preference number: 4 (lower is better)
Translates to: LHHSHTNYLAPLYFCRFLYQPRR*LQRRSR
Trigger: TCGGGATCTGCGCTGCAGCCACCGCCGCGGTTGATA...TAGAAATCTACAGAAGTATAGGGGAGCCAGATAGTTTGTATGGCTGTGGTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp AGGCAGGCAGTGGGAATTAAATGTACCTCCTTCCACCCCTGCCATAAAGGTGGGGATCCAGTGATTCCTTaGGATTCTGGTGGACAGAGA +
Preference number: 4 (lower is better)
Translates to: RQAVGIKCTSFHPCHKGGDPVIP*DSGGQR
Trigger: TCTCTGTCCACCAGAATCTCAAGGAATCACTGGATC...CCCACCTTTATGGCAGGGGTGGAAGGAGGTACATTTAATTCCCACTGCCTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp GATCTTGAGAAAAGCTCCCCAATGCTTTCCAGCTCTCCAATGGCCTGCAACCTGACCCACCAAAAGACGTaGACACCGGACAAGAGTTTC +
Preference number: 4 (lower is better)
Translates to: DLEKSSPMLSSSPMACNLTHQKT*TPDKSF
Trigger: GAAACTCTTGTCCGGTGTTCACGTCTTTTGGTGGGT...CAGGTTGCAGGCCATTGGAGAGCTGGAAAGCATTGGGGAGCTTTTCTCAAGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp TCTTTGCTGACGGAAGTGCAATGGTCCCACTGCATATTCCTCCATGCTGCTTGGAAATTCTGCAAGGCCTaGATGATTCCTGCCTGGCGT +
Preference number: 4 (lower is better)
Translates to: SLLTEVQWSHCIFLHAAWKFCKA*MIPAWR
Trigger: ACGCCAGGCAGGAATCATTCAGGCCTTGCAGAATTT...CCAAGCAGCATGGAGGAATATGCAGTGGGACCATTGCACTTCCGTCAGCAAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp CAGGCAGTGGGAATTAAATGTACCTCCTTCCACCCCTGCCATAAAGGTGGGACAAAATTCTGCAAGGCCTaGATGATTCCTGCCTGGCGT +
Preference number: 4 (lower is better)
Translates to: QAVGIKCTSFHPCHKGGTKFCKA*MIPAWR
Trigger: ACGCCAGGCAGGAATCATTCAGGCCTTGCAGAATTT...TGTCCCACCTTTATGGCAGGGGTGGAAGGAGGTACATTTAATTCCCACTGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp CAGGCAGTGGGAATTAAATGTACCTCCTTCCACCCCTGCCATAAAGGTGGGACAGCCCTTTCAGGGAGCTaGGTGTTCTTGAAAGTTCTG +
Preference number: 4 (lower is better)
Translates to: QAVGIKCTSFHPCHKGGTALSGS*VFLKVL
Trigger: CAGAACTTTCAAGAACACTCAGCTCCCTGAAAGGGC...TGTCCCACCTTTATGGCAGGGGTGGAAGGAGGTACATTTAATTCCCACTGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp GTTTACGATCCTCTTTCAGTGCACGCAGGGCTAATTCATCCAACTCCAGCTCTCGTGCCTCAACACTTCTaGCCATCTGAGGTCTCCTAC +
Preference number: 4 (lower is better)
Translates to: VYDPLSVHAGLIHPTPALVPQHF*PSEVSY
Trigger: GTAGGAGACCTCAGATGGTCAGAAGTGTTGAGGCAC...GAGAGCTGGAGTTGGATGAATTAGCCCTGCGTGCACTGAAAGAGGATCGTAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp CAGGCAGTGGGAATTAAATGTACCTCCTTCCACCCCTGCCATAAAGGTGGGACAGGAAGACCTGTTGCATaGCAGCATCTTGTCTCAGGT +
Preference number: 4 (lower is better)
Translates to: QAVGIKCTSFHPCHKGGTGRPVA*QHLVSG
Trigger: ACCTGAGACAAGATGCTGTCATGCAACAGGTCTTCC...TGTCCCACCTTTATGGCAGGGGTGGAAGGAGGTACATTTAATTCCCACTGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp CACCAATGGGGACAGTTCCTGTGCACCATTCAAGAACACCACTTCGCTGAGAGAGGAAGACCTGTTGCATaGCAGCATCTTGTCTCAGGT +
Preference number: 4 (lower is better)
Translates to: HQWGQFLCTIQEHHFAERGRPVA*QHLVSG
Trigger: ACCTGAGACAAGATGCTGTCATGCAACAGGTCTTCC...TCTCTCAGCGAAGTGGTGTTCTTGAATGGTGCACAGGAACTGTCCCCATTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp CACAAGGAGATGAGGAGGAAGTGTGTTTGCCTTGGCCTGGGAAATCTCCTATCAAGAACACCACTTCGCTaGGAGAGGGGAACCACCTTA +
Preference number: 4 (lower is better)
Translates to: HKEMRRKCVCLGLGNLLSRTPLR*ERGTTL
Trigger: TAAGGTGGTTCCCCTCTCTCAGCGAAGTGGTGTTCT...TGATAGGAGATTTCCCAGGCCAAGGCAAACACACTTCCTCCTCATCTCCTTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp AGGCAGGCAGTGGGAATTAAATGTACCTCCTTCCACCCCTGCCATAAAGGTGGGGGCACTGAAAGGCACTaGAATCATTTGGCCTGTATC +
Preference number: 4 (lower is better)
Translates to: RQAVGIKCTSFHPCHKGGGTERH*NHLACI
Trigger: GATACAGGCCAAATGATTTCAGTGCCTTTCAGTGCC...CCCACCTTTATGGCAGGGGTGGAAGGAGGTACATTTAATTCCCACTGCCTGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp ACCTGTTGCATGACAGCATCTTGTCTCAGGTCATCACGGCCCTTAACAAGCTGTCTTGTCCACCAACACTaGGCACAGTGCCTTCTTCCA +
Preference number: 4 (lower is better)
Translates to: TCCMTASCLRSSRPLTSCLVHQH*AQCLLP
Trigger: TGGAAGAAGGCACTGTGCTCAGTGTTGGTGGACAAG...ACAGCTTGTTAAGGGCCGTGATGACCTGAGACAAGATGCTGTCATGCAACAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp CAGGCAGTGGGAATTAAATGTACCTCCTTCCACCCCTGCCATAAAGGTGGGACAACTAGCACAAGGAGATaGGGAGGAAGTGTGTTTGCC +
Preference number: 4 (lower is better)
Translates to: QAVGIKCTSFHPCHKGGTTSTRR*GGSVFA
Trigger: GGCAAACACACTTCCTCCTCATCTCCTTGTGCTAGT...TGTCCCACCTTTATGGCAGGGGTGGAAGGAGGTACATTTAATTCCCACTGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp CTACTAGGAAGGCTGAGGCACGAGAATCTGAGCTCAGGAGGTGGAGGTTGCAGTGGTCATAGTAAGTTATaGTGGTGCCACTACACTCCA +
Preference number: 4 (lower is better)
Translates to: LLGRLRHENLSSGGGGCSGHSKL*WCHYTP
Trigger: TGGAGTGTAGTGGCACCATCATAACTTACTATGACC...ACTGCAACCTCCACCTCCTGAGCTCAGATTCTCGTGCCTCAGCCTTCCTAGTAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531525.2
CDS-3UTR GCA 90 bp AGGCAGGCAGTGGGAATTAAATGTACCTCCTTCCACCCCTGCCATAAAGGTGGGGGCTTTGCCCCACATTaGTTCGTGTTCATATGTTCG +
Preference number: 4 (lower is better)
Translates to: RQAVGIKCTSFHPCHKGGGFAPH*FVFICS
Trigger: CGAACATATGAACACGAAGCAATGTGGGGCAAAGCC...CCCACCTTTATGGCAGGGGTGGAAGGAGGTACATTTAATTCCCACTGCCTGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR GCA 90 bp CACAAGGAGATGAGGAGGAAGTGTGTTTGCCTTGGCCTGGGAAATCTCCTATCAAGCTCTCCAATGGCCTaGAACCTGCTAAGTGTGGGA +
Preference number: 4 (lower is better)
Translates to: HKEMRRKCVCLGLGNLLSSSPMA*NLLSVG
Trigger: TCCCACACTTAGCAGGTTGCAGGCCATTGGAGAGCT...TGATAGGAGATTTCCCAGGCCAAGGCAAACACACTTCCTCCTCATCTCCTTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR GCA 90 bp CAGGCAGTGGGAATTAAATGTACCTCCTTCCACCCCTGCCATAAAGGTGGGACATGGGGACAGTTCCTGTaGACCATTCAAGAACACCAC +
Preference number: 4 (lower is better)
Translates to: QAVGIKCTSFHPCHKGGTWGQFL*TIQEHH
Trigger: GTGGTGTTCTTGAATGGTGCACAGGAACTGTCCCCA...TGTCCCACCTTTATGGCAGGGGTGGAAGGAGGTACATTTAATTCCCACTGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR GCA 90 bp GTATCACAGCACATTATGAACTCTGGTTTACTTGGGTTTTCTTCTGCCACTGTCCCAGGAGGCAGAGGTTaGAGTGAGCGGAGATCGCGC +
Preference number: 4 (lower is better)
Translates to: VSQHIMNSGLLGFSSATVPGGRG*SERRSR
Trigger: GCGCGATCTCCGCTCACTGCAACCTCTGCCTCCTGG...GACAGTGGCAGAAGAAAACCCAAGTAAACCAGAGTTCATAATGTGCTGTGATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530958.5
CDS-3UTR GCA 90 bp TCACTTAGGAACAGAGAAGCTTCAGCCTGCAGTGAGCTATCATCACACCATTGCGATTGCACCACTGCATaGACTCCAGCCTGGGCTACA +
Preference number: 4 (lower is better)
Translates to: SLRNREASACSELSSHHCDCTTA*TPAWAT
Trigger: TGTAGCCCAGGCTGGAGTGCATGCAGTGGTGCAATC...GCAATGGTGTGATGATAGCTCACTGCAGGCTGAAGCTTCTCTGTTCCTAAGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638443.1
CDS-3UTR CCA 90 bp GATCTTGAGAAAAGCTCCCCAATGCTTTCCAGCTCTCCAATGGCCTGCAACCTGGCATCTTTTTCTGCCTaGAGGCTTGTGTTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: DLEKSSPMLSSSPMACNLASFSA*RLVLRL
Trigger: CAGCCTCAACACAAGCCTCCAGGCAGAAAAAGATGC...CAGGTTGCAGGCCATTGGAGAGCTGGAAAGCATTGGGGAGCTTTTCTCAAGATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CCA 90 bp AGGCAGGCAGTGGGAATTAAATGTACCTCCTTCCACCCCTGCCATAAAGGTGGGGCACCTATGGTACTTTaGCTCTCTCCAGGTTCGTTT +
Preference number: 4 (lower is better)
Translates to: RQAVGIKCTSFHPCHKGGAPMVL*LSPGSF
Trigger: AAACGAACCTGGAGAGAGCCAAAGTACCATAGGTGC...CCCACCTTTATGGCAGGGGTGGAAGGAGGTACATTTAATTCCCACTGCCTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CCA 90 bp AGGCAGGCAGTGGGAATTAAATGTACCTCCTTCCACCCCTGCCATAAAGGTGGGCAAGAAATTCACCAATaGGGACAGTTCCTGTGCACC +
Preference number: 4 (lower is better)
Translates to: RQAVGIKCTSFHPCHKGGQEIHQ*GQFLCT
Trigger: GGTGCACAGGAACTGTCCCCATTGGTGAATTTCTTG...CCCACCTTTATGGCAGGGGTGGAAGGAGGTACATTTAATTCCCACTGCCTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp CAGGCAGTGGGAATTAAATGTACCTCCTTCCACCCCTGCCATAAAGGTGGGACATCCAATACCTGTTTCTaGACCTCCACCTGCTCATAC +
Preference number: 4 (lower is better)
Translates to: QAVGIKCTSFHPCHKGGTSNTCF*TSTCSY
Trigger: GTATGAGCAGGTGGAGGTTCAGAAACAGGTATTGGA...TGTCCCACCTTTATGGCAGGGGTGGAAGGAGGTACATTTAATTCCCACTGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp AGGCAGGCAGTGGGAATTAAATGTACCTCCTTCCACCCCTGCCATAAAGGTGGGTCTTGCGGATTATCCTaGGAAGCTCTCATAATGTCC +
Preference number: 4 (lower is better)
Translates to: RQAVGIKCTSFHPCHKGGSCGLS*EALIMS
Trigger: GGACATTATGAGAGCTTCTCAGGATAATCCGCAAGA...CCCACCTTTATGGCAGGGGTGGAAGGAGGTACATTTAATTCCCACTGCCTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp AGGCAGGCAGTGGGAATTAAATGTACCTCCTTCCACCCCTGCCATAAAGGTGGGGGTAGGTCAGCATTATaGAGGTCCACTGAAGTTCTT +
Preference number: 4 (lower is better)
Translates to: RQAVGIKCTSFHPCHKGGGRSAL*RSTEVL
Trigger: AAGAACTTCAGTGGACCTTCATAATGCTGACCTACC...CCCACCTTTATGGCAGGGGTGGAAGGAGGTACATTTAATTCCCACTGCCTGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp CACAAGGAGATGAGGAGGAAGTGTGTTTGCCTTGGCCTGGGAAATCTCCTATCAAAATTCTGCAAGGCCTaGATGATTCCTGCCTGGCGT +
Preference number: 4 (lower is better)
Translates to: HKEMRRKCVCLGLGNLLSKFCKA*MIPAWR
Trigger: ACGCCAGGCAGGAATCATTCAGGCCTTGCAGAATTT...TGATAGGAGATTTCCCAGGCCAAGGCAAACACACTTCCTCCTCATCTCCTTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp GTTTACGATCCTCTTTCAGTGCACGCAGGGCTAATTCATCCAACTCCAGCTCTCGCCCTTTCAGGGAGCTaGGTGTTCTTGAAAGTTCTG +
Preference number: 4 (lower is better)
Translates to: VYDPLSVHAGLIHPTPALALSGS*VFLKVL
Trigger: CAGAACTTTCAAGAACACTCAGCTCCCTGAAAGGGC...GAGAGCTGGAGTTGGATGAATTAGCCCTGCGTGCACTGAAAGAGGATCGTAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp GATCTTGAGAAAAGCTCCCCAATGCTTTCCAGCTCTCCAATGGCCTGCAACCTGAACTCCAGCTCTCGCTaGACCTTTACTGTGTATCTG +
Preference number: 4 (lower is better)
Translates to: DLEKSSPMLSSSPMACNLNSSSR*TFTVYL
Trigger: CAGATACACAGTAAAGGTTCAGCGAGAGCTGGAGTT...CAGGTTGCAGGCCATTGGAGAGCTGGAAAGCATTGGGGAGCTTTTCTCAAGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp GCCTCCCATCATCTTGGTCCCCATTCTAGCAGCCAATTGGTACATAAGAGGCAAGGAAGACCTGTTGCATaGCAGCATCTTGTCTCAGGT +
Preference number: 4 (lower is better)
Translates to: ASHHLGPHSSSQLVHKRQGRPVA*QHLVSG
Trigger: ACCTGAGACAAGATGCTGTCATGCAACAGGTCTTCC...TTGCCTCTTATGTACCAATTGGCTGCTAGAATGGGGACCAAGATGATGGGAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp CACAAGGAGATGAGGAGGAAGTGTGTTTGCCTTGGCCTGGGAAATCTCCTATCAGGAAGACCTGTTGCATaGCAGCATCTTGTCTCAGGT +
Preference number: 4 (lower is better)
Translates to: HKEMRRKCVCLGLGNLLSGRPVA*QHLVSG
Trigger: ACCTGAGACAAGATGCTGTCATGCAACAGGTCTTCC...TGATAGGAGATTTCCCAGGCCAAGGCAAACACACTTCCTCCTCATCTCCTTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp CACAAGGAGATGAGGAGGAAGTGTGTTTGCCTTGGCCTGGGAAATCTCCTATCATCTCACAGCATCTTCTaGAGACACCTTCAACACCCG +
Preference number: 4 (lower is better)
Translates to: HKEMRRKCVCLGLGNLLSSHSIF*RHLQHP
Trigger: CGGGTGTTGAAGGTGTCTTCAGAAGATGCTGTGAGA...TGATAGGAGATTTCCCAGGCCAAGGCAAACACACTTCCTCCTCATCTCCTTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp TCTTTGCTGACGGAAGTGCAATGGTCCCACTGCATATTCCTCCATGCTGCTTGGCTATGGCCTGCTGTATaGGCAAATTCACTTGTCCAC +
Preference number: 4 (lower is better)
Translates to: SLLTEVQWSHCIFLHAAWLWPAV*ANSLVH
Trigger: GTGGACAAGTGAATTTGCTCATACAGCAGGCCATAG...CCAAGCAGCATGGAGGAATATGCAGTGGGACCATTGCACTTCCGTCAGCAAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp CAGCTATTCAGAAGGCTGAGACAGGAGAATTCCTTGTACCCAGGAATTCAAGGTGGCAGGAGGATCACTTaGGGCCAAGAATTCGAGACC +
Preference number: 4 (lower is better)
Translates to: QLFRRLRQENSLYPGIQGGRRIT*GQEFET
Trigger: GGTCTCGAATTCTTGGCCTCAAGTGATCCTCCTGCC...ACCTTGAATTCCTGGGTACAAGGAATTCTCCTGTCTCAGCCTTCTGAATAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531525.2
CDS-3UTR TCA 90 bp CAGCTATTCAGAAGGCTGAGACAGGAGAATTCCTTGTACCCAGGAATTCAAGGTCTGAGCTCAGGAGTTTaGGACCACCCTGGCCAACAT +
Preference number: 4 (lower is better)
Translates to: QLFRRLRQENSLYPGIQGLSSGV*DHPGQH
Trigger: ATGTTGGCCAGGGTGGTCTCAAACTCCTGAGCTCAG...ACCTTGAATTCCTGGGTACAAGGAATTCTCCTGTCTCAGCCTTCTGAATAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531525.2
CDS-3UTR TCA 90 bp CAGTGGTGTTTACAACGAATTGATCACAACCAGTTACAGATTTCTTTGTTCCTTGGCAGGAGGATCACCTaGGCCTGGGAGGCGGAGGCT +
Preference number: 4 (lower is better)
Translates to: QWCLQRIDHNQLQISLFLGRRIT*AWEAEA
Trigger: AGCCTCCGCCTCCCAGGCTCAGGTGATCCTCCTGCC...AAGGAACAAAGAAATCTGTAACTGGTTGTGATCAATTCGTTGTAAACACCACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638443.1
CDS-3UTR GCA 90 bp TCTTCCCTCCACCACAGCCATACAAACTATCTGGCTCCCCTATACTTCTGTAGAGTGGATCGGCTCGTTTaGGAGAAGTGTCGAAGACAG +
Preference number: 4 (lower is better)
Translates to: SSLHHSHTNYLAPLYFCRVDRLV*EKCRRQ
Trigger: CTGTCTTCGACACTTCTCGCAAACGAGCCGATCCAC...TCTACAGAAGTATAGGGGAGCCAGATAGTTTGTATGGCTGTGGTGGAGGGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527805.6
ENST00000529588.5
ENST00000675595.1
CDS-3UTR GCA 90 bp AGGCAGGCAGTGGGAATTAAATGTACCTCCTTCCACCCCTGCCATAAAGGTGGGCAGCATCGGAAAAAGTaGTCTGACTCTGAATCCAAG +
Preference number: 4 (lower is better)
Translates to: RQAVGIKCTSFHPCHKGGQHRKK*SDSESK
Trigger: CTTGGATTCAGAGTCAGAGCACTTTTTCCGATGCTG...CCCACCTTTATGGCAGGGGTGGAAGGAGGTACATTTAATTCCCACTGCCTGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR GCA 90 bp AGGCAGGCAGTGGGAATTAAATGTACCTCCTTCCACCCCTGCCATAAAGGTGGGTTGGGGTCTATGGCCTaGTGTATGAGCAAATTCACT +
Preference number: 4 (lower is better)
Translates to: RQAVGIKCTSFHPCHKGGLGSMA*CMSKFT
Trigger: AGTGAATTTGCTCATACAGCAGGCCATAGACCCCAA...CCCACCTTTATGGCAGGGGTGGAAGGAGGTACATTTAATTCCCACTGCCTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR GCA 90 bp TACCTACTGAACCCAAATATGTCTGTATCACAGCACATTATGAACTCTGGTTTAAACCGCGGCGGTGGCTaGAGCGCAGATCCCGACTCC +
Preference number: 4 (lower is better)
Translates to: YLLNPNMSVSQHIMNSGLNRGGG*SADPDS
Trigger: GGAGTCGGGATCTGCGCTGCAGCCACCGCCGCGGTT...TAAACCAGAGTTCATAATGTGCTGTGATACAGACATATTTGGGTTCAGTAGGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530958.5
CDS-3UTR GCA 90 bp TACCTACTGAACCCAAATATGTCTGTATCACAGCACATTATGAACTCTGGTTTACAGCGCAGAAGCCGCTaGGTTGCCTCCGCGCCCCTA +
Preference number: 4 (lower is better)
Translates to: YLLNPNMSVSQHIMNSGLQRRSR*VASAPL
Trigger: TAGGGGCGCGGAGGCAACGCAGCGGCTTCTGCGCTG...TAAACCAGAGTTCATAATGTGCTGTGATACAGACATATTTGGGTTCAGTAGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530958.5
CDS-3UTR GCA 90 bp GTATCACAGCACATTATGAACTCTGGTTTACTTGGGTTTTCTTCTGCCACTGTCGCCACTCTGGAGGGGTaGATGAGATTGGCGGTCTGG +
Preference number: 4 (lower is better)
Translates to: VSQHIMNSGLLGFSSATVATLEG*MRLAVW
Trigger: CCAGACCGCCAATCTCATGCACCCCTCCAGAGTGGC...GACAGTGGCAGAAGAAAACCCAAGTAAACCAGAGTTCATAATGTGCTGTGATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530958.5
CDS-3UTR GCA 90 bp GAATATTCAGAGGAGAGTAGCATAAAACCTAGGTCACGTGAGCTGAAGAAAGTGCTGGGAGGCGGAGGCTaGAGTGAGCCAAGATTGCAC +
Preference number: 4 (lower is better)
Translates to: EYSEESSIKPRSRELKKVLGGGG*SEPRLH
Trigger: GTGCAATCTTGGCTCACTGCAGCCTCCGCCTCCCAG...CACTTTCTTCAGCTCACGTGACCTAGGTTTTATGCTACTCTCCTCTGAATATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638443.1
CDS-3UTR CCA 90 bp AGGCAGGCAGTGGGAATTAAATGTACCTCCTTCCACCCCTGCCATAAAGGTGGGTTCCTGGAACTATACTaGTGGTCAGTGCCAAAGTCA +
Preference number: 4 (lower is better)
Translates to: RQAVGIKCTSFHPCHKGGFLELY*WSVPKS
Trigger: TGACTTTGGCACTGACCACCAGTATAGTTCCAGGAA...CCCACCTTTATGGCAGGGGTGGAAGGAGGTACATTTAATTCCCACTGCCTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CCA 90 bp AGGCAGGCAGTGGGAATTAAATGTACCTCCTTCCACCCCTGCCATAAAGGTGGGAAGAACATCTTCCATTaGCAAGGGGTACTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: RQAVGIKCTSFHPCHKGGKNIFH*QGVLFS
Trigger: GGAGAAGAGTACCCCTTGCCAATGGAAGATGTTCTT...CCCACCTTTATGGCAGGGGTGGAAGGAGGTACATTTAATTCCCACTGCCTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CCA 90 bp TCTTCCCTCCACCACAGCCATACAAACTATCTGGCTCCCCTATACTTCTGTAGAAGTTTGCAGGGGTTGTaGATCGGCTCGTTTGCGAGA +
Preference number: 4 (lower is better)
Translates to: SSLHHSHTNYLAPLYFCRSLQGL*IGSFAR
Trigger: TCTCGCAAACGAGCCGATCCACAACCCCTGCAAACT...TCTACAGAAGTATAGGGGAGCCAGATAGTTTGTATGGCTGTGGTGGAGGGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000527805.6
ENST00000529588.5
ENST00000675595.1
CDS-3UTR CCA 90 bp CACAAGGAGATGAGGAGGAAGTGTGTTTGCCTTGGCCTGGGAAATCTCCTATCACTGACGGAAGTGCAATaGTCCCACTGCATATTCCTC +
Preference number: 4 (lower is better)
Translates to: HKEMRRKCVCLGLGNLLSLTEVQ*SHCIFL
Trigger: GAGGAATATGCAGTGGGACCATTGCACTTCCGTCAG...TGATAGGAGATTTCCCAGGCCAAGGCAAACACACTTCCTCCTCATCTCCTTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CCA 90 bp CTCAATCACCCATTTGTTAATCTCCGCAGCTGGGATGAACATTTTCCTAAGGATGGAGGCCGAGGAGGGTaGATCACGAGGTCAAGCGAT +
Preference number: 4 (lower is better)
Translates to: LNHPFVNLRSWDEHFPKDGGRGG*ITRSSD
Trigger: ATCGCTTGACCTCGTGATCCACCCTCCTCGGCCTCC...ATCCTTAGGAAAATGTTCATCCCAGCTGCGGAGATTAACAAATGGGTGATTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CCA 90 bp TCACTTAGGAACAGAGAAGCTTCAGCCTGCAGTGAGCTATCATCACACCATTGCAGCCTCCCAAGTAGCTaGAATTACAAGCGTGCGCCA +
Preference number: 4 (lower is better)
Translates to: SLRNREASACSELSSHHCSLPSS*NYKRAP
Trigger: TGGCGCACGCTTGTAATTCCAGCTACTTGGGAGGCT...GCAATGGTGTGATGATAGCTCACTGCAGGCTGAAGCTTCTCTGTTCCTAAGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638443.1
CDS-3UTR CCA 90 bp TCACTTAGGAACAGAGAAGCTTCAGCCTGCAGTGAGCTATCATCACACCATTGCGGGGTTTCGCTATATTaGCCAGGCTGGTCTCGAACT +
Preference number: 4 (lower is better)
Translates to: SLRNREASACSELSSHHCGVSLY*PGWSRT
Trigger: AGTTCGAGACCAGCCTGGCCAATATAGCGAAACCCC...GCAATGGTGTGATGATAGCTCACTGCAGGCTGAAGCTTCTCTGTTCCTAAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638443.1
3UTR CAA 72 bp AAAAGTGCTCTGACTCTGAATCCAAGTTTGCAGGGGTaGTGGATCGGCTCGTTTGCGAGAAGTGTCGAAGAC +
Preference number: 4 (lower is better)
Translates to: KSALTLNPSLQG*WIGSFARSVED
Trigger: GTCTTCGACACTTCTCGCAAACGAGCCGATCCACAACCCCTGCAAACTTGGATTCAGAGTCAGAGCACTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp AGGCAGGCAGTGGGAATTAAATGTACCTCCTTCCACCCCTGCCATAAAGGTGGGTTTAATCCGTCAGTCTaGGAACAGCATCCTTTGGTA +
Preference number: 4 (lower is better)
Translates to: RQAVGIKCTSFHPCHKGGFNPSV*EQHPLV
Trigger: TACCAAAGGATGCTGTTCTCAGACTGACGGATTAAA...CCCACCTTTATGGCAGGGGTGGAAGGAGGTACATTTAATTCCCACTGCCTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp CAGGCAGTGGGAATTAAATGTACCTCCTTCCACCCCTGCCATAAAGGTGGGACACCTGGAACAATCTATTaGTTGACTCTGCAGCCAACA +
Preference number: 4 (lower is better)
Translates to: QAVGIKCTSFHPCHKGGTPGTIY*LTLQPT
Trigger: TGTTGGCTGCAGAGTCAATCAATAGATTGTTCCAGG...TGTCCCACCTTTATGGCAGGGGTGGAAGGAGGTACATTTAATTCCCACTGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp CACAAGGAGATGAGGAGGAAGTGTGTTTGCCTTGGCCTGGGAAATCTCCTATCAAGGATCCAAATCCCCTaGAAAGTCACAGAGGTCAGT +
Preference number: 4 (lower is better)
Translates to: HKEMRRKCVCLGLGNLLSRIQIP*KVTEVS
Trigger: ACTGACCTCTGTGACTTTTCAGGGGATTTGGATCCT...TGATAGGAGATTTCCCAGGCCAAGGCAAACACACTTCCTCCTCATCTCCTTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp TCTTTGCTGACGGAAGTGCAATGGTCCCACTGCATATTCCTCCATGCTGCTTGGCTGCTGATCGAACTTTaGCACAATCTTCTACCAGTG +
Preference number: 4 (lower is better)
Translates to: SLLTEVQWSHCIFLHAAWLLIEL*HNLLPV
Trigger: CACTGGTAGAAGATTGTGTCAAAGTTCGATCAGCAG...CCAAGCAGCATGGAGGAATATGCAGTGGGACCATTGCACTTCCGTCAGCAAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp CACAAGGAGATGAGGAGGAAGTGTGTTTGCCTTGGCCTGGGAAATCTCCTATCAGTCGAAGACAGCTGGTaGAAAATCCCTGAACATGTG +
Preference number: 4 (lower is better)
Translates to: HKEMRRKCVCLGLGNLLSVEDSW*KIPEHV
Trigger: CACATGTTCAGGGATTTTTCACCAGCTGTCTTCGAC...TGATAGGAGATTTCCCAGGCCAAGGCAAACACACTTCCTCCTCATCTCCTTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp GCTAACCAGTTGCCACAAACCCTCAGACATTCTGTGTATGTAAGTTTTAGGCTGTCTGCAAGGCCTGAATaGTTCCTGCCTGGCGTGTTG +
Preference number: 4 (lower is better)
Translates to: ANQLPQTLRHSVYVSFRLSARPE*FLPGVL
Trigger: CAACACGCCAGGCAGGAATCATTCAGGCCTTGCAGA...CAGCCTAAAACTTACATACACAGAATGTCTGAGGGTTTGTGGCAACTGGTTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp CATCTTCCCTCCACCACAGCCATACAAACTATCTGGCTCCCCTATACTTCTGTACTTCTACTTCTTTGCTaGCGGAAGTGCAATGGTCCC +
Preference number: 4 (lower is better)
Translates to: HLPSTTAIQTIWLPYTSVLLLLC*RKCNGP
Trigger: GGGACCATTGCACTTCCGTCAGCAAAGAAGTAGAAG...TACAGAAGTATAGGGGAGCCAGATAGTTTGTATGGCTGTGGTGGAGGGAAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp ACCTGTTGCATGACAGCATCTTGTCTCAGGTCATCACGGCCCTTAACAAGCTGTCGATCCTCATCAAGCTaGGAGCTTTGTTTAGGCACA +
Preference number: 4 (lower is better)
Translates to: TCCMTASCLRSSRPLTSCRSSSS*ELCLGT
Trigger: TGTGCCTAAACAAAGCTCTCAGCTTGATGAGGATCG...ACAGCTTGTTAAGGGCCGTGATGACCTGAGACAAGATGCTGTCATGCAACAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp TCTTTGCTGACGGAAGTGCAATGGTCCCACTGCATATTCCTCCATGCTGCTTGGACACTTCTGACCATCTaGGGTCTCCTACTTCTGATA +
Preference number: 4 (lower is better)
Translates to: SLLTEVQWSHCIFLHAAWTLLTI*GLLLLI
Trigger: TATCAGAAGTAGGAGACCTCAGATGGTCAGAAGTGT...CCAAGCAGCATGGAGGAATATGCAGTGGGACCATTGCACTTCCGTCAGCAAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp CAGGCAGTGGGAATTAAATGTACCTCCTTCCACCCCTGCCATAAAGGTGGGACAACACTTCTGACCATCTaGGGTCTCCTACTTCTGATA +
Preference number: 4 (lower is better)
Translates to: QAVGIKCTSFHPCHKGGTTLLTI*GLLLLI
Trigger: TATCAGAAGTAGGAGACCTCAGATGGTCAGAAGTGT...TGTCCCACCTTTATGGCAGGGGTGGAAGGAGGTACATTTAATTCCCACTGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp GAGTTGTCCATTTCCTTTTCCATCAGGATCTCCAAAATGACTGTGCGTAGAGCCAGAACACCACTTCGCTaGGAGAGGGGAACCACCTTA +
Preference number: 4 (lower is better)
Translates to: ELSISFSIRISKMTVRRARTPLR*ERGTTL
Trigger: TAAGGTGGTTCCCCTCTCTCAGCGAAGTGGTGTTCT...GGCTCTACGCACAGTCATTTTGGAGATCCTGATGGAAAAGGAAATGGACAACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp CACAAGGAGATGAGGAGGAAGTGTGTTTGCCTTGGCCTGGGAAATCTCCTATCACTATGGCCTGCTGTATaGGCAAATTCACTTGTCCAC +
Preference number: 4 (lower is better)
Translates to: HKEMRRKCVCLGLGNLLSLWPAV*ANSLVH
Trigger: GTGGACAAGTGAATTTGCTCATACAGCAGGCCATAG...TGATAGGAGATTTCCCAGGCCAAGGCAAACACACTTCCTCCTCATCTCCTTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp AGGCAGGCAGTGGGAATTAAATGTACCTCCTTCCACCCCTGCCATAAAGGTGGGGAGATCAAATATGAATaGGTGCCTGCCATTGGCAAT +
Preference number: 4 (lower is better)
Translates to: RQAVGIKCTSFHPCHKGGEIKYE*VPAIGN
Trigger: ATTGCCAATGGCAGGCACTCATTCATATTTGATCTC...CCCACCTTTATGGCAGGGGTGGAAGGAGGTACATTTAATTCCCACTGCCTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR GCA 90 bp AGGCAGGCAGTGGGAATTAAATGTACCTCCTTCCACCCCTGCCATAAAGGTGGGTATACTGGTGGTCAGTaGCAAAGTCAAACAGCATAC +
Preference number: 4 (lower is better)
Translates to: RQAVGIKCTSFHPCHKGGYTGGQ*QSQTAY
Trigger: GTATGCTGTTTGACTTTGGCACTGACCACCAGTATA...CCCACCTTTATGGCAGGGGTGGAAGGAGGTACATTTAATTCCCACTGCCTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR GCA 90 bp GAGTTGTCCATTTCCTTTTCCATCAGGATCTCCAAAATGACTGTGCGTAGAGCCGTGGATCGGCTCGTTTaGGAGAAGTGTCGAAGACAG +
Preference number: 4 (lower is better)
Translates to: ELSISFSIRISKMTVRRAVDRLV*EKCRRQ
Trigger: CTGTCTTCGACACTTCTCGCAAACGAGCCGATCCAC...GGCTCTACGCACAGTCATTTTGGAGATCCTGATGGAAAAGGAAATGGACAACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR GCA 90 bp GTTTACGATCCTCTTTCAGTGCACGCAGGGCTAATTCATCCAACTCCAGCTCTCGGCTTTGCCCCACATTaGTTCGTGTTCATATGTTCG +
Preference number: 4 (lower is better)
Translates to: VYDPLSVHAGLIHPTPALGFAPH*FVFICS
Trigger: CGAACATATGAACACGAAGCAATGTGGGGCAAAGCC...GAGAGCTGGAGTTGGATGAATTAGCCCTGCGTGCACTGAAAGAGGATCGTAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR GCA 90 bp CTAAGCACGTTTCTGCTAACCAGTTGCCACAAACCCTCAGACATTCTGTGTATGGCTGGGATTGTTCGCTaGACAGCTGGCATCCAACTT +
Preference number: 4 (lower is better)
Translates to: LSTFLLTSCHKPSDILCMAGIVR*TAGIQL
Trigger: AAGTTGGATGCCAGCTGTGCAGCGAACAATCCCAGC...CATACACAGAATGTCTGAGGGTTTGTGGCAACTGGTTAGCAGAAACGTGCTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR GCA 90 bp CCCTCCACCACAGCCATACAAACTATCTGGCTCCCCTATACTTCTGTAGATTTCGCTGTCTCCTCTCCTTaGCATCGGAACCTACACAAT +
Preference number: 4 (lower is better)
Translates to: PSTTAIQTIWLPYTSVDFAVSSP*HRNLHN
Trigger: ATTGTGTAGGTTCCGATGGCAAGGAGAGGAGACAGC...GAAATCTACAGAAGTATAGGGGAGCCAGATAGTTTGTATGGCTGTGGTGGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR GCA 90 bp CTTCCCTCCACCACAGCCATACAAACTATCTGGCTCCCCTATACTTCTGTAGATGCTGTCTCCTCTCCTTaGCATCGGAACCTACACAAT +
Preference number: 4 (lower is better)
Translates to: LPSTTAIQTIWLPYTSVDAVSSP*HRNLHN
Trigger: ATTGTGTAGGTTCCGATGGCAAGGAGAGGAGACAGC...ATCTACAGAAGTATAGGGGAGCCAGATAGTTTGTATGGCTGTGGTGGAGGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR GCA 90 bp AGGCAGGCAGTGGGAATTAAATGTACCTCCTTCCACCCCTGCCATAAAGGTGGGTCATCTTCCGGCCTCTaGTGTAAATACAAAGCTTTC +
Preference number: 4 (lower is better)
Translates to: RQAVGIKCTSFHPCHKGGSSSGL*CKYKAF
Trigger: GAAAGCTTTGTATTTACAGCAGAGGCCGGAAGATGA...CCCACCTTTATGGCAGGGGTGGAAGGAGGTACATTTAATTCCCACTGCCTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR GCA 90 bp GAGATTATACTCACTAATACACGAGTCAGTAGTTTTACTTTCAGGTGGCTTTTTAACCGCGGCGGTGGCTaGAGCGCAGATCCCGACTCC +
Preference number: 4 (lower is better)
Translates to: EIILTNTRVSSFTFRWLFNRGGG*SADPDS
Trigger: GGAGTCGGGATCTGCGCTGCAGCCACCGCCGCGGTT...AAAAAGCCACCTGAAAGTAAAACTACTGACTCGTGTATTAGTGAGTATAATCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR GCA 90 bp ATAGACAGATACAGACAGAGTGCTTTCTTTGGTGAAGTTTCATTTCATGAGGAACAGAAGCCGCTGCGTTaGCTCCGCGCCCCTACCACT +
Preference number: 4 (lower is better)
Translates to: IDRYRQSAFFGEVSFHEEQKPLR*LRAPTT
Trigger: AGTGGTAGGGGCGCGGAGGCAACGCAGCGGCTTCTG...TTCCTCATGAAATGAAACTTCACCAAAGAAAGCACTCTGTCTGTATCTGTCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530958.5
CDS-3UTR CCA 90 bp AGGCAGGCAGTGGGAATTAAATGTACCTCCTTCCACCCCTGCCATAAAGGTGGGCTTTTTCTTGGGTTTTaGCTCCTTTCGGATGATGGA +
Preference number: 4 (lower is better)
Translates to: RQAVGIKCTSFHPCHKGGLFLGF*LLSDDG
Trigger: TCCATCATCCGAAAGGAGCCAAAACCCAAGAAAAAG...CCCACCTTTATGGCAGGGGTGGAAGGAGGTACATTTAATTCCCACTGCCTGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CCA 90 bp TCTTTGCTGACGGAAGTGCAATGGTCCCACTGCATATTCCTCCATGCTGCTTGGCTGGAACTATACTGGTaGTCAGTGCCAAAGTCAAAC +
Preference number: 4 (lower is better)
Translates to: SLLTEVQWSHCIFLHAAWLELYW*SVPKSN
Trigger: GTTTGACTTTGGCACTGACCACCAGTATAGTTCCAG...CCAAGCAGCATGGAGGAATATGCAGTGGGACCATTGCACTTCCGTCAGCAAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CCA 90 bp CACAAGGAGATGAGGAGGAAGTGTGTTTGCCTTGGCCTGGGAAATCTCCTATCAGCCAAAGGCAGGCAGTaGGAATTAAATGTACCTCCT +
Preference number: 4 (lower is better)
Translates to: HKEMRRKCVCLGLGNLLSAKGRQ*ELNVPP
Trigger: AGGAGGTACATTTAATTCCCACTGCCTGCCTTTGGC...TGATAGGAGATTTCCCAGGCCAAGGCAAACACACTTCCTCCTCATCTCCTTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CCA 90 bp GGGAAAGCTATTATCTCCCTTAATCTGGACACAACTGTTCAAGCAGTCTATAATTATCAACCGCGGCGGTaGCTGCAGCGCAGATCCCGA +
Preference number: 4 (lower is better)
Translates to: GKAIISLNLDTTVQAVYNYQPRR*LQRRSR
Trigger: TCGGGATCTGCGCTGCAGCCACCGCCGCGGTTGATA...ATTATAGACTGCTTGAACAGTTGTGTCCAGATTAAGGGAGATAATAGCTTTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CCA 90 bp CTACTGAACCCAAATATGTCTGTATCACAGCACATTATGAACTCTGGTTTACTTTCTGGGAGGCCGAGGTaGGCGTTCCACGAGGTCAGG +
Preference number: 4 (lower is better)
Translates to: LLNPNMSVSQHIMNSGLLSGRPR*AFHEVR
Trigger: CCTGACCTCGTGGAACGCCCACCTCGGCCTCCCAGA...AAGTAAACCAGAGTTCATAATGTGCTGTGATACAGACATATTTGGGTTCAGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530958.5
3UTR CAA 72 bp GTTCGCTGCACAGCTGGCATCCAACTTCTTGATCATTaGCTTGAGAATACTCAGGGCAAGACTCTGCTCCTT +
Preference number: 4 (lower is better)
Translates to: VRCTAGIQLLDH*LENTQGKTLLL
Trigger: AAGGAGCAGAGTCTTGCCCTGAGTATTCTCAAGCAAATGATCAAGAAGTTGGATGCCAGCTGTGCAGCGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR CAA 72 bp CTGGGATTGTTCGCTGCACAGCTGGCATCCAACTTCTaGATCATTTGCTTGAGAATACTCAGGGCAAGACTC +
Preference number: 4 (lower is better)
Translates to: LGLFAAQLASNF*IICLRILRARL
Trigger: GAGTCTTGCCCTGAGTATTCTCAAGCAAATGATCAAGAAGTTGGATGCCAGCTGTGCAGCGAACAATCCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp AGGCAGGCAGTGGGAATTAAATGTACCTCCTTCCACCCCTGCCATAAAGGTGGGTCTATGAACATCTTGTaGAGGTTTCAGATAGAGCCT +
Preference number: 4 (lower is better)
Translates to: RQAVGIKCTSFHPCHKGGSMNIL*RFQIEP
Trigger: AGGCTCTATCTGAAACCTTCACAAGATGTTCATAGA...CCCACCTTTATGGCAGGGGTGGAAGGAGGTACATTTAATTCCCACTGCCTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp AGGCAGGCAGTGGGAATTAAATGTACCTCCTTCCACCCCTGCCATAAAGGTGGGGCCACTAAAACTCTATaGACATCTTGTGAAGGTTTC +
Preference number: 4 (lower is better)
Translates to: RQAVGIKCTSFHPCHKGGATKTL*TSCEGF
Trigger: GAAACCTTCACAAGATGTTCATAGAGTTTTAGTGGC...CCCACCTTTATGGCAGGGGTGGAAGGAGGTACATTTAATTCCCACTGCCTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp AGGCAGGCAGTGGGAATTAAATGTACCTCCTTCCACCCCTGCCATAAAGGTGGGTGTTGGGGTAGAAGCTaGGATAGTATCATCAGTAAT +
Preference number: 4 (lower is better)
Translates to: RQAVGIKCTSFHPCHKGGCWGRS*DSIISN
Trigger: ATTACTGATGATACTATCTCAGCTTCTACCCCAACA...CCCACCTTTATGGCAGGGGTGGAAGGAGGTACATTTAATTCCCACTGCCTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp CATCTTCCCTCCACCACAGCCATACAAACTATCTGGCTCCCCTATACTTCTGTAGATCCAGTGATTCCTTaGGATTCTGGTGGACAGAGA +
Preference number: 4 (lower is better)
Translates to: HLPSTTAIQTIWLPYTSVDPVIP*DSGGQR
Trigger: TCTCTGTCCACCAGAATCTCAAGGAATCACTGGATC...TACAGAAGTATAGGGGAGCCAGATAGTTTGTATGGCTGTGGTGGAGGGAAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp TCTTCCCTCCACCACAGCCATACAAACTATCTGGCTCCCCTATACTTCTGTAGAGATCCAGTGATTCCTTaGGATTCTGGTGGACAGAGA +
Preference number: 4 (lower is better)
Translates to: SSLHHSHTNYLAPLYFCRDPVIP*DSGGQR
Trigger: TCTCTGTCCACCAGAATCTCAAGGAATCACTGGATC...TCTACAGAAGTATAGGGGAGCCAGATAGTTTGTATGGCTGTGGTGGAGGGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp CTTCCCTCCACCACAGCCATACAAACTATCTGGCTCCCCTATACTTCTGTAGATAAGACAGCGATCCAGTaGTTCCTTGAGATTCTGGTG +
Preference number: 4 (lower is better)
Translates to: LPSTTAIQTIWLPYTSVDKTAIQ*FLEILV
Trigger: CACCAGAATCTCAAGGAATCACTGGATCGCTGTCTT...ATCTACAGAAGTATAGGGGAGCCAGATAGTTTGTATGGCTGTGGTGGAGGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp TCTTTGCTGACGGAAGTGCAATGGTCCCACTGCATATTCCTCCATGCTGCTTGGAGTATCATCTTCCATTaGTTCTACTTCTCCACGGTC +
Preference number: 4 (lower is better)
Translates to: SLLTEVQWSHCIFLHAAWSIIFH*FYFSTV
Trigger: GACCGTGGAGAAGTAGAATCAATGGAAGATGATACT...CCAAGCAGCATGGAGGAATATGCAGTGGGACCATTGCACTTCCGTCAGCAAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp CACAAGGAGATGAGGAGGAAGTGTGTTTGCCTTGGCCTGGGAAATCTCCTATCAGAACAATCTATTGATTaGCTCTGCAGCCAACATGCG +
Preference number: 4 (lower is better)
Translates to: HKEMRRKCVCLGLGNLLSEQSID*LCSQHA
Trigger: CGCATGTTGGCTGCAGAGTCAATCAATAGATTGTTC...TGATAGGAGATTTCCCAGGCCAAGGCAAACACACTTCCTCCTCATCTCCTTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp TCTTCCCTCCACCACAGCCATACAAACTATCTGGCTCCCCTATACTTCTGTAGAAGGATCCAAATCCCCTaGAAAGTCACAGAGGTCAGT +
Preference number: 4 (lower is better)
Translates to: SSLHHSHTNYLAPLYFCRRIQIP*KVTEVS
Trigger: ACTGACCTCTGTGACTTTTCAGGGGATTTGGATCCT...TCTACAGAAGTATAGGGGAGCCAGATAGTTTGTATGGCTGTGGTGGAGGGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp CACAAGGAGATGAGGAGGAAGTGTGTTTGCCTTGGCCTGGGAAATCTCCTATCATCTTGCGGATTATCCTaGGAAGCTCTCATAATGTCC +
Preference number: 4 (lower is better)
Translates to: HKEMRRKCVCLGLGNLLSSCGLS*EALIMS
Trigger: GGACATTATGAGAGCTTCTCAGGATAATCCGCAAGA...TGATAGGAGATTTCCCAGGCCAAGGCAAACACACTTCCTCCTCATCTCCTTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp CTAAGCACGTTTCTGCTAACCAGTTGCCACAAACCCTCAGACATTCTGTGTATGAAATTCTGCAAGGCCTaGATGATTCCTGCCTGGCGT +
Preference number: 4 (lower is better)
Translates to: LSTFLLTSCHKPSDILCMKFCKA*MIPAWR
Trigger: ACGCCAGGCAGGAATCATTCAGGCCTTGCAGAATTT...CATACACAGAATGTCTGAGGGTTTGTGGCAACTGGTTAGCAGAAACGTGCTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp CACAAGGAGATGAGGAGGAAGTGTGTTTGCCTTGGCCTGGGAAATCTCCTATCAGCCATGATAGGCTCCTaGAAACTAAAATCACTGTCC +
Preference number: 4 (lower is better)
Translates to: HKEMRRKCVCLGLGNLLSAMIGS*KLKSLS
Trigger: GGACAGTGATTTTAGTTTTCAGGAGCCTATCATGGC...TGATAGGAGATTTCCCAGGCCAAGGCAAACACACTTCCTCCTCATCTCCTTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp TCTTTGCTGACGGAAGTGCAATGGTCCCACTGCATATTCCTCCATGCTGCTTGGGTTAACAGAGTTTCCTaGGAGTTTCTCATCACTTCC +
Preference number: 4 (lower is better)
Translates to: SLLTEVQWSHCIFLHAAWVNRVS*EFLITS
Trigger: GGAAGTGATGAGAAACTCTCAGGAAACTCTGTTAAC...CCAAGCAGCATGGAGGAATATGCAGTGGGACCATTGCACTTCCGTCAGCAAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp CATCTTCCCTCCACCACAGCCATACAAACTATCTGGCTCCCCTATACTTCTGTATGCGCCCAGCCCGAATaGCCATTATTTCTAAAGAGT +
Preference number: 4 (lower is better)
Translates to: HLPSTTAIQTIWLPYTSVCAQPE*PLFLKS
Trigger: ACTCTTTAGAAATAATGGTCATTCGGGCTGGGCGCA...TACAGAAGTATAGGGGAGCCAGATAGTTTGTATGGCTGTGGTGGAGGGAAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527805.6
CDS-3UTR TCA 90 bp GGGAAAGCTATTATCTCCCTTAATCTGGACACAACTGTTCAAGCAGTCTATAATGAACTCCTGACCTTGTaGTCCGCTCACCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: GKAIISLNLDTTVQAVYNELLTL*SAHLGL
Trigger: GAGGCCGAGGTGAGCGGATCACAAGGTCAGGAGTTC...ATTATAGACTGCTTGAACAGTTGTGTCCAGATTAAGGGAGATAATAGCTTTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp ATAGACAGATACAGACAGAGTGCTTTCTTTGGTGAAGTTTCATTTCATGAGGAACTCTGGAGGGGTGCATaGGATTGGCGGTCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: IDRYRQSAFFGEVSFHEELWRGA*DWRSGE
Trigger: CTCCCCAGACCGCCAATCTCATGCACCCCTCCAGAG...TTCCTCATGAAATGAAACTTCACCAAAGAAAGCACTCTGTCTGTATCTGTCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530958.5
CDS-3UTR TCA 90 bp GTATCACAGCACATTATGAACTCTGGTTTACTTGGGTTTTCTTCTGCCACTGTCTGCCCAGGCTGGTCTTaGACTCCTGAGCTCAAGCAA +
Preference number: 4 (lower is better)
Translates to: VSQHIMNSGLLGFSSATVCPGWS*TPELKQ
Trigger: TTGCTTGAGCTCAGGAGTTCAAGACCAGCCTGGGCA...GACAGTGGCAGAAGAAAACCCAAGTAAACCAGAGTTCATAATGTGCTGTGATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530958.5
CDS-3UTR TCA 90 bp TACCTACTGAACCCAAATATGTCTGTATCACAGCACATTATGAACTCTGGTTTAGGCCGGAGTGCAGTGTaGTCACAGCTCACTGCAGCC +
Preference number: 4 (lower is better)
Translates to: YLLNPNMSVSQHIMNSGLGRSAV*SQLTAA
Trigger: GGCTGCAGTGAGCTGTGATCACACTGCACTCCGGCC...TAAACCAGAGTTCATAATGTGCTGTGATACAGACATATTTGGGTTCAGTAGGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530958.5
CDS-3UTR TCA 90 bp CTACTAGGAAGGCTGAGGCACGAGAATCTGAGCTCAGGAGGTGGAGGTTGCAGTCAGTTAGATGAGAAATaGGGGTCTGAACTAAATGAT +
Preference number: 4 (lower is better)
Translates to: LLGRLRHENLSSGGGGCSQLDEK*GSELND
Trigger: ATCATTTAGTTCAGACCCTCATTTCTCATCTAACTG...ACTGCAACCTCCACCTCCTGAGCTCAGATTCTCGTGCCTCAGCCTTCCTAGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531525.2
CDS-3UTR GCA 90 bp CAGGCAGTGGGAATTAAATGTACCTCCTTCCACCCCTGCCATAAAGGTGGGACATATACTGGTGGTCAGTaGCAAAGTCAAACAGCATAC +
Preference number: 4 (lower is better)
Translates to: QAVGIKCTSFHPCHKGGTYTGGQ*QSQTAY
Trigger: GTATGCTGTTTGACTTTGGCACTGACCACCAGTATA...TGTCCCACCTTTATGGCAGGGGTGGAAGGAGGTACATTTAATTCCCACTGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR GCA 90 bp GAGTTGTCCATTTCCTTTTCCATCAGGATCTCCAAAATGACTGTGCGTAGAGCCAGTCTCTCTTTGCTGTaGCATCCCACTGTCTCTGGT +
Preference number: 4 (lower is better)
Translates to: ELSISFSIRISKMTVRRASLSLL*HPTVSG
Trigger: ACCAGAGACAGTGGGATGGCACAGCAAAGAGAGACT...GGCTCTACGCACAGTCATTTTGGAGATCCTGATGGAAAAGGAAATGGACAACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR GCA 90 bp ACCTGTTGCATGACAGCATCTTGTCTCAGGTCATCACGGCCCTTAACAAGCTGTCAGCATCGGAAAAAGTaGTCTGACTCTGAATCCAAG +
Preference number: 4 (lower is better)
Translates to: TCCMTASCLRSSRPLTSCQHRKK*SDSESK
Trigger: CTTGGATTCAGAGTCAGAGCACTTTTTCCGATGCTG...ACAGCTTGTTAAGGGCCGTGATGACCTGAGACAAGATGCTGTCATGCAACAGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR GCA 90 bp CACAAGGAGATGAGGAGGAAGTGTGTTTGCCTTGGCCTGGGAAATCTCCTATCACAGCATCGGAAAAAGTaGTCTGACTCTGAATCCAAG +
Preference number: 4 (lower is better)
Translates to: HKEMRRKCVCLGLGNLLSQHRKK*SDSESK
Trigger: CTTGGATTCAGAGTCAGAGCACTTTTTCCGATGCTG...TGATAGGAGATTTCCCAGGCCAAGGCAAACACACTTCCTCCTCATCTCCTTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR GCA 90 bp AGGCAGGCAGTGGGAATTAAATGTACCTCCTTCCACCCCTGCCATAAAGGTGGGCATATTCCTCCATGCTaGTTGGTAATGAAGTTCTTC +
Preference number: 4 (lower is better)
Translates to: RQAVGIKCTSFHPCHKGGHIPPC*LVMKFF
Trigger: GAAGAACTTCATTACCAAGCAGCATGGAGGAATATG...CCCACCTTTATGGCAGGGGTGGAAGGAGGTACATTTAATTCCCACTGCCTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR GCA 90 bp AAAGGCATCAATCAAATATTCTGCCCACTAGCACAAGGAGATGAGGAGGAAGTGGCTGGGATTGTTCGCTaGACAGCTGGCATCCAACTT +
Preference number: 4 (lower is better)
Translates to: KGINQIFCPLAQGDEEEVAGIVR*TAGIQL
Trigger: AAGTTGGATGCCAGCTGTGCAGCGAACAATCCCAGC...CACTTCCTCCTCATCTCCTTGTGCTAGTGGGCAGAATATTTGATTGATGCCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR GCA 90 bp GCCTCCCATCATCTTGGTCCCCATTCTAGCAGCCAATTGGTACATAAGAGGCAATTGGGGTCTATGGCCTaGTGTATGAGCAAATTCACT +
Preference number: 4 (lower is better)
Translates to: ASHHLGPHSSSQLVHKRQLGSMA*CMSKFT
Trigger: AGTGAATTTGCTCATACAGCAGGCCATAGACCCCAA...TTGCCTCTTATGTACCAATTGGCTGCTAGAATGGGGACCAAGATGATGGGAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR GCA 90 bp CACAAGGAGATGAGGAGGAAGTGTGTTTGCCTTGGCCTGGGAAATCTCCTATCATTGGGGTCTATGGCCTaGTGTATGAGCAAATTCACT +
Preference number: 4 (lower is better)
Translates to: HKEMRRKCVCLGLGNLLSLGSMA*CMSKFT
Trigger: AGTGAATTTGCTCATACAGCAGGCCATAGACCCCAA...TGATAGGAGATTTCCCAGGCCAAGGCAAACACACTTCCTCCTCATCTCCTTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR GCA 90 bp TACCTACTGAACCCAAATATGTCTGTATCACAGCACATTATGAACTCTGGTTTAAACAGAGGAAGGCTCTaGGGGGCGGGAGATGGGGGA +
Preference number: 4 (lower is better)
Translates to: YLLNPNMSVSQHIMNSGLNRGRL*GAGDGG
Trigger: TCCCCCATCTCCCGCCCCGCAGAGCCTTCCTCTGTT...TAAACCAGAGTTCATAATGTGCTGTGATACAGACATATTTGGGTTCAGTAGGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000530958.5
CDS-3UTR GCA 90 bp GTATCACAGCACATTATGAACTCTGGTTTACTTGGGTTTTCTTCTGCCACTGTCTCATGGAGGCCGGAGTaGAGTGTGATCACAGCTCAC +
Preference number: 4 (lower is better)
Translates to: VSQHIMNSGLLGFSSATVSWRPE*SVITAH
Trigger: GTGAGCTGTGATCACACTGCACTCCGGCCTCCATGA...GACAGTGGCAGAAGAAAACCCAAGTAAACCAGAGTTCATAATGTGCTGTGATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530958.5
CDS-3UTR GCA 90 bp TCACTTAGGAACAGAGAAGCTTCAGCCTGCAGTGAGCTATCATCACACCATTGCACAGGAATGAGCCACTaGGCCTGGCCAGTTTTTAAT +
Preference number: 4 (lower is better)
Translates to: SLRNREASACSELSSHHCTGMSH*AWPVFN
Trigger: ATTAAAAACTGGCCAGGCGCAGTGGCTCATTCCTGT...GCAATGGTGTGATGATAGCTCACTGCAGGCTGAAGCTTCTCTGTTCCTAAGTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638443.1
CDS-3UTR CCA 90 bp CACAAGGAGATGAGGAGGAAGTGTGTTTGCCTTGGCCTGGGAAATCTCCTATCATTCCTGGAACTATACTaGTGGTCAGTGCCAAAGTCA +
Preference number: 4 (lower is better)
Translates to: HKEMRRKCVCLGLGNLLSFLELY*WSVPKS
Trigger: TGACTTTGGCACTGACCACCAGTATAGTTCCAGGAA...TGATAGGAGATTTCCCAGGCCAAGGCAAACACACTTCCTCCTCATCTCCTTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CCA 90 bp GATCTTGAGAAAAGCTCCCCAATGCTTTCCAGCTCTCCAATGGCCTGCAACCTGCATTTTTACCGTTCCTaGAACTATACTGGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: DLEKSSPMLSSSPMACNLHFYRS*NYTGGQ
Trigger: CTGACCACCAGTATAGTTCCAGGAACGGTAAAAATG...CAGGTTGCAGGCCATTGGAGAGCTGGAAAGCATTGGGGAGCTTTTCTCAAGATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CCA 90 bp AGGCAGGCAGTGGGAATTAAATGTACCTCCTTCCACCCCTGCCATAAAGGTGGGTCTTTATCTTTTTGGTaGTGTTCACATTCTGGCACG +
Preference number: 4 (lower is better)
Translates to: RQAVGIKCTSFHPCHKGGSLSFW*CSHSGT
Trigger: CGTGCCAGAATGTGAACACCACCAAAAAGATAAAGA...CCCACCTTTATGGCAGGGGTGGAAGGAGGTACATTTAATTCCCACTGCCTGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CCA 90 bp CACAAGGAGATGAGGAGGAAGTGTGTTTGCCTTGGCCTGGGAAATCTCCTATCATCCTTGAGATTCTGGTaGACAGAGAAGCCAATACTG +
Preference number: 4 (lower is better)
Translates to: HKEMRRKCVCLGLGNLLSSLRFW*TEKPIL
Trigger: CAGTATTGGCTTCTCTGTCCACCAGAATCTCAAGGA...TGATAGGAGATTTCCCAGGCCAAGGCAAACACACTTCCTCCTCATCTCCTTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CCA 90 bp CAGGCAGTGGGAATTAAATGTACCTCCTTCCACCCCTGCCATAAAGGTGGGACATTCTCCACGGTCAAATaGCTTTTTGATGAAGGATGC +
Preference number: 4 (lower is better)
Translates to: QAVGIKCTSFHPCHKGGTFSTVK*LFDEGC
Trigger: GCATCCTTCATCAAAAAGCCATTTGACCGTGGAGAA...TGTCCCACCTTTATGGCAGGGGTGGAAGGAGGTACATTTAATTCCCACTGCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CCA 90 bp CATCTTCCCTCCACCACAGCCATACAAACTATCTGGCTCCCCTATACTTCTGTAGCACCTATGGTACTTTaGCTCTCTCCAGGTTCGTTT +
Preference number: 4 (lower is better)
Translates to: HLPSTTAIQTIWLPYTSVAPMVL*LSPGSF
Trigger: AAACGAACCTGGAGAGAGCCAAAGTACCATAGGTGC...TACAGAAGTATAGGGGAGCCAGATAGTTTGTATGGCTGTGGTGGAGGGAAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CCA 90 bp CACAAGGAGATGAGGAGGAAGTGTGTTTGCCTTGGCCTGGGAAATCTCCTATCAGGGTTCTCAGCACTATaGGACATTTCTCTCATTCCT +
Preference number: 4 (lower is better)
Translates to: HKEMRRKCVCLGLGNLLSGFSAL*DISLIP
Trigger: AGGAATGAGAGAAATGTCCCATAGTGCTGAGAACCC...TGATAGGAGATTTCCCAGGCCAAGGCAAACACACTTCCTCCTCATCTCCTTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CCA 90 bp CTCCACCACAGCCATACAAACTATCTGGCTCCCCTATACTTCTGTAGATTTCTAAGTTTGCAGGGGTTGTaGATCGGCTCGTTTGCGAGA +
Preference number: 4 (lower is better)
Translates to: LHHSHTNYLAPLYFCRFLSLQGL*IGSFAR
Trigger: TCTCGCAAACGAGCCGATCCACAACCCCTGCAAACT...TAGAAATCTACAGAAGTATAGGGGAGCCAGATAGTTTGTATGGCTGTGGTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000527805.6
ENST00000529588.5
ENST00000675595.1
CDS-3UTR CCA 90 bp CAGGCAGTGGGAATTAAATGTACCTCCTTCCACCCCTGCCATAAAGGTGGGACAGCCATACAAACTATCTaGCTCCCCTATACTTCTGTA +
Preference number: 4 (lower is better)
Translates to: QAVGIKCTSFHPCHKGGTAIQTI*LPYTSV
Trigger: TACAGAAGTATAGGGGAGCCAGATAGTTTGTATGGC...TGTCCCACCTTTATGGCAGGGGTGGAAGGAGGTACATTTAATTCCCACTGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CCA 90 bp AGGCAGGCAGTGGGAATTAAATGTACCTCCTTCCACCCCTGCCATAAAGGTGGGCCATATTCTCCTGTGTaGTCCACCTTAATTTCCATA +
Preference number: 4 (lower is better)
Translates to: RQAVGIKCTSFHPCHKGGPYSPV*STLISI
Trigger: TATGGAAATTAAGGTGGACCACACAGGAGAATATGG...CCCACCTTTATGGCAGGGGTGGAAGGAGGTACATTTAATTCCCACTGCCTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CCA 90 bp CATCTTCCCTCCACCACAGCCATACAAACTATCTGGCTCCCCTATACTTCTGTACAAGAAATTCACCAATaGGGACAGTTCCTGTGCACC +
Preference number: 4 (lower is better)
Translates to: HLPSTTAIQTIWLPYTSVQEIHQ*GQFLCT
Trigger: GGTGCACAGGAACTGTCCCCATTGGTGAATTTCTTG...TACAGAAGTATAGGGGAGCCAGATAGTTTGTATGGCTGTGGTGGAGGGAAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CCA 90 bp AGGCAGGCAGTGGGAATTAAATGTACCTCCTTCCACCCCTGCCATAAAGGTGGGCTTTCAAAGGATTCATaGTCCAGTCAAAGAGTGGAT +
Preference number: 4 (lower is better)
Translates to: RQAVGIKCTSFHPCHKGGLSKDS*SSQRVD
Trigger: ATCCACTCTTTGACTGGACCATGAATCCTTTGAAAG...CCCACCTTTATGGCAGGGGTGGAAGGAGGTACATTTAATTCCCACTGCCTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CCA 90 bp GGGAAAGCTATTATCTCCCTTAATCTGGACACAACTGTTCAAGCAGTCTATAATCCATACTGGCCAGGCTaGTCTCTTGGCCAGGCTGGT +
Preference number: 4 (lower is better)
Translates to: GKAIISLNLDTTVQAVYNPYWPG*SLGQAG
Trigger: ACCAGCCTGGCCAAGAGACCAGCCTGGCCAGTATGG...ATTATAGACTGCTTGAACAGTTGTGTCCAGATTAAGGGAGATAATAGCTTTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CCA 90 bp AGCCAAGAAATTAAAATAAGAATGGGCTTGTGTGCAGCAACAGCCCTGGGAATAAGGGTTTCACCATACTaGCCAGGCTGGTCTCTTGGC +
Preference number: 4 (lower is better)
Translates to: SQEIKIRMGLCAATALGIRVSPY*PGWSLG
Trigger: GCCAAGAGACCAGCCTGGCCAGTATGGTGAAACCCT...TATTCCCAGGGCTGTTGCTGCACACAAGCCCATTCTTATTTTAATTTCTTGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CCA 90 bp ATTAGAATACTTGAACAGAACAGGAGCCTCATAGCATACCATGCAAGGCTAAAGAGCCTCTCGAGTAGCTaGGATTACAGGTGCCCGCCA +
Preference number: 4 (lower is better)
Translates to: IRILEQNRSLIAYHARLKSLSSS*DYRCPP
Trigger: TGGCGGGCACCTGTAATCCCAGCTACTCGAGAGGCT...CTTTAGCCTTGCATGGTATGCTATGAGGCTCCTGTTCTGTTCAAGTATTCTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CCA 90 bp TACCTACTGAACCCAAATATGTCTGTATCACAGCACATTATGAACTCTGGTTTATATCAACCGCGGCGGTaGCTGCAGCGCAGATCCCGA +
Preference number: 4 (lower is better)
Translates to: YLLNPNMSVSQHIMNSGLYQPRR*LQRRSR
Trigger: TCGGGATCTGCGCTGCAGCCACCGCCGCGGTTGATA...TAAACCAGAGTTCATAATGTGCTGTGATACAGACATATTTGGGTTCAGTAGGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530958.5
CDS-3UTR TCA 90 bp CAGGCAGTGGGAATTAAATGTACCTCCTTCCACCCCTGCCATAAAGGTGGGACACCTCTACTTCCTATATaGCTTATCTCATTCACTAGC +
Preference number: 4 (lower is better)
Translates to: QAVGIKCTSFHPCHKGGTPLLPI*LISFTS
Trigger: GCTAGTGAATGAGATAAGTCATATAGGAAGTAGAGG...TGTCCCACCTTTATGGCAGGGGTGGAAGGAGGTACATTTAATTCCCACTGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp GCTGGCATCCAACTTCTTGATCATTTGCTTGAGAATACTCAGGGCAAGACTCTGAAGACAGCGATCCAGTaGTTCCTTGAGATTCTGGTG +
Preference number: 4 (lower is better)
Translates to: AGIQLLDHLLENTQGKTLKTAIQ*FLEILV
Trigger: CACCAGAATCTCAAGGAATCACTGGATCGCTGTCTT...CAGAGTCTTGCCCTGAGTATTCTCAAGCAAATGATCAAGAAGTTGGATGCCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp CAGGCAGTGGGAATTAAATGTACCTCCTTCCACCCCTGCCATAAAGGTGGGACAGAGTCCATATTGCTTTaGCCTAGGTTTTTCACTACA +
Preference number: 4 (lower is better)
Translates to: QAVGIKCTSFHPCHKGGTESILL*PRFFTT
Trigger: TGTAGTGAAAAACCTAGGTCAAAGCAATATGGACTC...TGTCCCACCTTTATGGCAGGGGTGGAAGGAGGTACATTTAATTCCCACTGCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp CATCTTCCCTCCACCACAGCCATACAAACTATCTGGCTCCCCTATACTTCTGTAGTAAGAAACTGTCCTTaGGCATCCCTTGTGTTCTCA +
Preference number: 4 (lower is better)
Translates to: HLPSTTAIQTIWLPYTSVVRNCP*ASLVFS
Trigger: TGAGAACACAAGGGATGCTCAAGGACAGTTTCTTAC...TACAGAAGTATAGGGGAGCCAGATAGTTTGTATGGCTGTGGTGGAGGGAAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp GCCTCCCATCATCTTGGTCCCCATTCTAGCAGCCAATTGGTACATAAGAGGCAATCAAAAGCTGTTTGCTaGAGCTTCAAAGGAAGTGCT +
Preference number: 4 (lower is better)
Translates to: ASHHLGPHSSSQLVHKRQSKAVC*SFKGSA
Trigger: AGCACTTCCTTTGAAGCTTCAGCAAACAGCTTTTGA...TTGCCTCTTATGTACCAATTGGCTGCTAGAATGGGGACCAAGATGATGGGAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp ACCTGTTGCATGACAGCATCTTGTCTCAGGTCATCACGGCCCTTAACAAGCTGTGTAATGACACATCCATaGTACAAGAAGGCCTTTGGT +
Preference number: 4 (lower is better)
Translates to: TCCMTASCLRSSRPLTSCVMTHP*YKKAFG
Trigger: ACCAAAGGCCTTCTTGTATCATGGATGTGTCATTAC...ACAGCTTGTTAAGGGCCGTGATGACCTGAGACAAGATGCTGTCATGCAACAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp GTTTACGATCCTCTTTCAGTGCACGCAGGGCTAATTCATCCAACTCCAGCTCTCGCTGTCTGGCAAACCTaGCTTAATAAGTCACAACAA +
Preference number: 4 (lower is better)
Translates to: VYDPLSVHAGLIHPTPALAVWQT*LNKSQQ
Trigger: TTGTTGTGACTTATTAAGTCAGGTTTGCCAGACAGC...GAGAGCTGGAGTTGGATGAATTAGCCCTGCGTGCACTGAAAGAGGATCGTAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp CTTCCCTCCACCACAGCCATACAAACTATCTGGCTCCCCTATACTTCTGTAGATCTGCTGATCGAACTTTaGCACAATCTTCTACCAGTG +
Preference number: 4 (lower is better)
Translates to: LPSTTAIQTIWLPYTSVDLLIEL*HNLLPV
Trigger: CACTGGTAGAAGATTGTGTCAAAGTTCGATCAGCAG...ATCTACAGAAGTATAGGGGAGCCAGATAGTTTGTATGGCTGTGGTGGAGGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp CACAAGGAGATGAGGAGGAAGTGTGTTTGCCTTGGCCTGGGAAATCTCCTATCACTGGTGAAAAATCCCTaGACATGTGTAGAAAGCAGA +
Preference number: 4 (lower is better)
Translates to: HKEMRRKCVCLGLGNLLSLVKNP*TCVESR
Trigger: TCTGCTTTCTACACATGTTCAGGGATTTTTCACCAG...TGATAGGAGATTTCCCAGGCCAAGGCAAACACACTTCCTCCTCATCTCCTTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp GTAATGCCCATGCCATCCACAATATCTCTGGTGAGTCTAAAAGGAACTGTCTCAGCCCTTTCAGGGAGCTaGGTGTTCTTGAAAGTTCTG +
Preference number: 4 (lower is better)
Translates to: VMPMPSTISLVSLKGTVSALSGS*VFLKVL
Trigger: CAGAACTTTCAAGAACACTCAGCTCCCTGAAAGGGC...TGAGACAGTTCCTTTTAGACTCACCAGAGATATTGTGGATGGCATGGGCATTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp AGGCAGGCAGTGGGAATTAAATGTACCTCCTTCCACCCCTGCCATAAAGGTGGGGACTCCACAGCTAACTaGATTGTACTGTTTAATTTG +
Preference number: 4 (lower is better)
Translates to: RQAVGIKCTSFHPCHKGGDSTAN*IVLFNL
Trigger: CAAATTAAACAGTACAATTCAGTTAGCTGTGGAGTC...CCCACCTTTATGGCAGGGGTGGAAGGAGGTACATTTAATTCCCACTGCCTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp GCACAGCTGGCATCCAACTTCTTGATCATTTGCTTGAGAATACTCAGGGCAAGAAACTCCAGCTCTCGCTaGACCTTTACTGTGTATCTG +
Preference number: 4 (lower is better)
Translates to: AQLASNFLIICLRILRARNSSSR*TFTVYL
Trigger: CAGATACACAGTAAAGGTTCAGCGAGAGCTGGAGTT...TCTTGCCCTGAGTATTCTCAAGCAAATGATCAAGAAGTTGGATGCCAGCTGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp GCTTCTTCTGGCTACCTCTGGTTTAGTCAGAAATTCATCTCTGTTTGCATTTGCGTGCCTCAACACTTCTaGCCATCTGAGGTCTCCTAC +
Preference number: 4 (lower is better)
Translates to: ASSGYLWFSQKFISVCICVPQHF*PSEVSY
Trigger: GTAGGAGACCTCAGATGGTCAGAAGTGTTGAGGCAC...GCAAATGCAAACAGAGATGAATTTCTGACTAAACCAGAGGTAGCCAGAAGAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp GCTTCTTCTGGCTACCTCTGGTTTAGTCAGAAATTCATCTCTGTTTGCATTTGCAGAACACCACTTCGCTaGGAGAGGGGAACCACCTTA +
Preference number: 4 (lower is better)
Translates to: ASSGYLWFSQKFISVCICRTPLR*ERGTTL
Trigger: TAAGGTGGTTCCCCTCTCTCAGCGAAGTGGTGTTCT...GCAAATGCAAACAGAGATGAATTTCTGACTAAACCAGAGGTAGCCAGAAGAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp AGCCAAGAAATTAAAATAAGAATGGGCTTGTGTGCAGCAACAGCCCTGGGAATAAGAACACCACTTCGCTaGGAGAGGGGAACCACCTTA +
Preference number: 4 (lower is better)
Translates to: SQEIKIRMGLCAATALGIRTPLR*ERGTTL
Trigger: TAAGGTGGTTCCCCTCTCTCAGCGAAGTGGTGTTCT...TATTCCCAGGGCTGTTGCTGCACACAAGCCCATTCTTATTTTAATTTCTTGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp AGGCAGGCAGTGGGAATTAAATGTACCTCCTTCCACCCCTGCCATAAAGGTGGGATGTACAAGTTCTGCTaGCTGCTCATTTATCAAGAT +
Preference number: 4 (lower is better)
Translates to: RQAVGIKCTSFHPCHKGGMYKFC*LLIYQD
Trigger: ATCTTGATAAATGAGCAGTCAGCAGAACTTGTACAT...CCCACCTTTATGGCAGGGGTGGAAGGAGGTACATTTAATTCCCACTGCCTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp CACAAGGAGATGAGGAGGAAGTGTGTTTGCCTTGGCCTGGGAAATCTCCTATCAGTTAACAGAGTTTCCTaGGAGTTTCTCATCACTTCC +
Preference number: 4 (lower is better)
Translates to: HKEMRRKCVCLGLGNLLSVNRVS*EFLITS
Trigger: GGAAGTGATGAGAAACTCTCAGGAAACTCTGTTAAC...TGATAGGAGATTTCCCAGGCCAAGGCAAACACACTTCCTCCTCATCTCCTTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp AGGCAGGCAGTGGGAATTAAATGTACCTCCTTCCACCCCTGCCATAAAGGTGGGTCTGGTCAATATCACTaGGATTTCGTTTGCATTCTT +
Preference number: 4 (lower is better)
Translates to: RQAVGIKCTSFHPCHKGGSGQYH*DFVCIL
Trigger: AAGAATGCAAACGAAATCTCAGTGATATTGACCAGA...CCCACCTTTATGGCAGGGGTGGAAGGAGGTACATTTAATTCCCACTGCCTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp ATTGTTCGCTGCACAGCTGGCATCCAACTTCTTGATCATTTGCTTGAGAATACTCTTGTCCACCAACACTaGGCACAGTGCCTTCTTCCA +
Preference number: 4 (lower is better)
Translates to: IVRCTAGIQLLDHLLENTLVHQH*AQCLLP
Trigger: TGGAAGAAGGCACTGTGCTCAGTGTTGGTGGACAAG...AGTATTCTCAAGCAAATGATCAAGAAGTTGGATGCCAGCTGTGCAGCGAACAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp GAGTTGTCCATTTCCTTTTCCATCAGGATCTCCAAAATGACTGTGCGTAGAGCCCTATGGCCTGCTGTATaGGCAAATTCACTTGTCCAC +
Preference number: 4 (lower is better)
Translates to: ELSISFSIRISKMTVRRALWPAV*ANSLVH
Trigger: GTGGACAAGTGAATTTGCTCATACAGCAGGCCATAG...GGCTCTACGCACAGTCATTTTGGAGATCCTGATGGAAAAGGAAATGGACAACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR GCA 90 bp CACCAATGGGGACAGTTCCTGTGCACCATTCAAGAACACCACTTCGCTGAGAGAAAACTACTGATTTCCTaGATCTTTTTCTGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: HQWGQFLCTIQEHHFAERKLLIS*IFFCLE
Trigger: CTCCAGGCAGAAAAAGATGCAGGAAATCAGTAGTTT...TCTCTCAGCGAAGTGGTGTTCTTGAATGGTGCACAGGAACTGTCCCCATTGGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR GCA 90 bp CACCAATGGGGACAGTTCCTGTGCACCATTCAAGAACACCACTTCGCTGAGAGATCTTCTTGGTACAGTTaGTCAAGCAACGTGTACATA +
Preference number: 4 (lower is better)
Translates to: HQWGQFLCTIQEHHFAERSSWYS*SSNVYI
Trigger: TATGTACACGTTGCTTGAGCAACTGTACCAAGAAGA...TCTCTCAGCGAAGTGGTGTTCTTGAATGGTGCACAGGAACTGTCCCCATTGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR GCA 90 bp CAGGCAGTGGGAATTAAATGTACCTCCTTCCACCCCTGCCATAAAGGTGGGACAAGCATTAGATACATATaGAGGTGGAGGGATTTGGTA +
Preference number: 4 (lower is better)
Translates to: QAVGIKCTSFHPCHKGGTSIRYI*RWRDLV
Trigger: TACCAAATCCCTCCACCTGCATATGTATCTAATGCT...TGTCCCACCTTTATGGCAGGGGTGGAAGGAGGTACATTTAATTCCCACTGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR GCA 90 bp GATCTTGAGAAAAGCTCCCCAATGCTTTCCAGCTCTCCAATGGCCTGCAACCTGAGCATTAGATACATATaGAGGTGGAGGGATTTGGTA +
Preference number: 4 (lower is better)
Translates to: DLEKSSPMLSSSPMACNLSIRYI*RWRDLV
Trigger: TACCAAATCCCTCCACCTGCATATGTATCTAATGCT...CAGGTTGCAGGCCATTGGAGAGCTGGAAAGCATTGGGGAGCTTTTCTCAAGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR GCA 90 bp CTCCACCACAGCCATACAAACTATCTGGCTCCCCTATACTTCTGTAGATTTCTAGTAGCAGTCTCTCTTTaGTGTGCCATCCCACTGTCT +
Preference number: 4 (lower is better)
Translates to: LHHSHTNYLAPLYFCRFLVAVSL*CAIPLS
Trigger: AGACAGTGGGATGGCACAGCAAAGAGAGACTGCTAC...TAGAAATCTACAGAAGTATAGGGGAGCCAGATAGTTTGTATGGCTGTGGTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR GCA 90 bp CAAGCCAGAGGGAACAAAGTCGGAATACCCACATATCATGTTCTTCTCCACTTAGTAGCAGTCTCTCTTTaGTGTGCCATCCCACTGTCT +
Preference number: 4 (lower is better)
Translates to: QARGNKVGIPTYHVLLHLVAVSL*CAIPLS
Trigger: AGACAGTGGGATGGCACAGCAAAGAGAGACTGCTAC...TAAGTGGAGAAGAACATGATATGTGGGTATTCCGACTTTGTTCCCTCTGGCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR GCA 90 bp CACAAGGAGATGAGGAGGAAGTGTGTTTGCCTTGGCCTGGGAAATCTCCTATCACTGCATATTCCTCCATaGTGCTTGGTAATGAAGTTC +
Preference number: 4 (lower is better)
Translates to: HKEMRRKCVCLGLGNLLSLHIPP*CLVMKF
Trigger: GAACTTCATTACCAAGCAGCATGGAGGAATATGCAG...TGATAGGAGATTTCCCAGGCCAAGGCAAACACACTTCCTCCTCATCTCCTTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR GCA 90 bp GCTTCTTCTGGCTACCTCTGGTTTAGTCAGAAATTCATCTCTGTTTGCATTTGCTGTGCTTCTTCCAGCTaGCACTCAGAGACTCCACAG +
Preference number: 4 (lower is better)
Translates to: ASSGYLWFSQKFISVCICCASSS*HSETPQ
Trigger: CTGTGGAGTCTCTGAGTGGCAGCTGGAAGAAGCACA...GCAAATGCAAACAGAGATGAATTTCTGACTAAACCAGAGGTAGCCAGAAGAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR GCA 90 bp CTCAATCACCCATTTGTTAATCTCCGCAGCTGGGATGAACATTTTCCTAAGGATTGTGCTTCTTCCAGCTaGCACTCAGAGACTCCACAG +
Preference number: 4 (lower is better)
Translates to: LNHPFVNLRSWDEHFPKDCASSS*HSETPQ
Trigger: CTGTGGAGTCTCTGAGTGGCAGCTGGAAGAAGCACA...ATCCTTAGGAAAATGTTCATCCCAGCTGCGGAGATTAACAAATGGGTGATTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR GCA 90 bp CAGTTGCCACAAACCCTCAGACATTCTGTGTATGTAAGTTTTAGGCTGGGATTGTGCCCAGAATACTTGTaGTTCTTCCAGCTGCCACTC +
Preference number: 4 (lower is better)
Translates to: QLPQTLRHSVYVSFRLGLCPEYL*FFQLPL
Trigger: GAGTGGCAGCTGGAAGAAGCACAAGTATTCTGGGCA...CAATCCCAGCCTAAAACTTACATACACAGAATGTCTGAGGGTTTGTGGCAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR GCA 90 bp TTGTTCGCTGCACAGCTGGCATCCAACTTCTTGATCATTTGCTTGAGAATACTCTGCCCAGAATACTTGTaGTTCTTCCAGCTGCCACTC +
Preference number: 4 (lower is better)
Translates to: LFAAQLASNFLIICLRILCPEYL*FFQLPL
Trigger: GAGTGGCAGCTGGAAGAAGCACAAGTATTCTGGGCA...GAGTATTCTCAAGCAAATGATCAAGAAGTTGGATGCCAGCTGTGCAGCGAACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR GCA 90 bp AAAGGCATCAATCAAATATTCTGCCCACTAGCACAAGGAGATGAGGAGGAAGTGTGCCCAGAATACTTGTaGTTCTTCCAGCTGCCACTC +
Preference number: 4 (lower is better)
Translates to: KGINQIFCPLAQGDEEEVCPEYL*FFQLPL
Trigger: GAGTGGCAGCTGGAAGAAGCACAAGTATTCTGGGCA...CACTTCCTCCTCATCTCCTTGTGCTAGTGGGCAGAATATTTGATTGATGCCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR GCA 90 bp CACCAATGGGGACAGTTCCTGTGCACCATTCAAGAACACCACTTCGCTGAGAGACTGCTGGAATATTTATaGCTTTTCTCTGAGTCTTCC +
Preference number: 4 (lower is better)
Translates to: HQWGQFLCTIQEHHFAERLLEYL*LFSESS
Trigger: GGAAGACTCAGAGAAAAGGCATAAATATTCCAGCAG...TCTCTCAGCGAAGTGGTGTTCTTGAATGGTGCACAGGAACTGTCCCCATTGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR GCA 90 bp CATCTTCCCTCCACCACAGCCATACAAACTATCTGGCTCCCCTATACTTCTGTAATCTGGAAGACCTGTTaGATGACAGCATCTTGTCTC +
Preference number: 4 (lower is better)
Translates to: HLPSTTAIQTIWLPYTSVIWKTC*MTASCL
Trigger: GAGACAAGATGCTGTCATGCAACAGGTCTTCCAGAT...TACAGAAGTATAGGGGAGCCAGATAGTTTGTATGGCTGTGGTGGAGGGAAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR GCA 90 bp CAAGCCAGAGGGAACAAAGTCGGAATACCCACATATCATGTTCTTCTCCACTTATGGGGACAGTTCCTGTaGACCATTCAAGAACACCAC +
Preference number: 4 (lower is better)
Translates to: QARGNKVGIPTYHVLLHLWGQFL*TIQEHH
Trigger: GTGGTGTTCTTGAATGGTGCACAGGAACTGTCCCCA...TAAGTGGAGAAGAACATGATATGTGGGTATTCCGACTTTGTTCCCTCTGGCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR GCA 90 bp TCTTCCCTCCACCACAGCCATACAAACTATCTGGCTCCCCTATACTTCTGTAGATTGGGGTCTATGGCCTaGTGTATGAGCAAATTCACT +
Preference number: 4 (lower is better)
Translates to: SSLHHSHTNYLAPLYFCRLGSMA*CMSKFT
Trigger: AGTGAATTTGCTCATACAGCAGGCCATAGACCCCAA...TCTACAGAAGTATAGGGGAGCCAGATAGTTTGTATGGCTGTGGTGGAGGGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CCA 90 bp TTGTTCGCTGCACAGCTGGCATCCAACTTCTTGATCATTTGCTTGAGAATACTCGCATCTTTTTCTGCCTaGAGGCTTGTGTTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: LFAAQLASNFLIICLRILASFSA*RLVLRL
Trigger: CAGCCTCAACACAAGCCTCCAGGCAGAAAAAGATGC...GAGTATTCTCAAGCAAATGATCAAGAAGTTGGATGCCAGCTGTGCAGCGAACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CCA 90 bp CTTCCCTCCACCACAGCCATACAAACTATCTGGCTCCCCTATACTTCTGTAGATTTCCTGGAACTATACTaGTGGTCAGTGCCAAAGTCA +
Preference number: 4 (lower is better)
Translates to: LPSTTAIQTIWLPYTSVDFLELY*WSVPKS
Trigger: TGACTTTGGCACTGACCACCAGTATAGTTCCAGGAA...ATCTACAGAAGTATAGGGGAGCCAGATAGTTTGTATGGCTGTGGTGGAGGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CCA 90 bp CATCTTCCCTCCACCACAGCCATACAAACTATCTGGCTCCCCTATACTTCTGTATTCCTGGAACTATACTaGTGGTCAGTGCCAAAGTCA +
Preference number: 4 (lower is better)
Translates to: HLPSTTAIQTIWLPYTSVFLELY*WSVPKS
Trigger: TGACTTTGGCACTGACCACCAGTATAGTTCCAGGAA...TACAGAAGTATAGGGGAGCCAGATAGTTTGTATGGCTGTGGTGGAGGGAAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CCA 90 bp GCCTCCCATCATCTTGGTCCCCATTCTAGCAGCCAATTGGTACATAAGAGGCAACATTTTTACCGTTCCTaGAACTATACTGGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: ASHHLGPHSSSQLVHKRQHFYRS*NYTGGQ
Trigger: CTGACCACCAGTATAGTTCCAGGAACGGTAAAAATG...TTGCCTCTTATGTACCAATTGGCTGCTAGAATGGGGACCAAGATGATGGGAGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CCA 90 bp TCTTTGCTGACGGAAGTGCAATGGTCCCACTGCATATTCCTCCATGCTGCTTGGAAGCCAATACTGGACTaGTGCTTTTCTATACCACAT +
Preference number: 4 (lower is better)
Translates to: SLLTEVQWSHCIFLHAAWKPILD*CFSIPH
Trigger: ATGTGGTATAGAAAAGCACCAGTCCAGTATTGGCTT...CCAAGCAGCATGGAGGAATATGCAGTGGGACCATTGCACTTCCGTCAGCAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CCA 90 bp CATCTTCCCTCCACCACAGCCATACAAACTATCTGGCTCCCCTATACTTCTGTATCCTTGAGATTCTGGTaGACAGAGAAGCCAATACTG +
Preference number: 4 (lower is better)
Translates to: HLPSTTAIQTIWLPYTSVSLRFW*TEKPIL
Trigger: CAGTATTGGCTTCTCTGTCCACCAGAATCTCAAGGA...TACAGAAGTATAGGGGAGCCAGATAGTTTGTATGGCTGTGGTGGAGGGAAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CCA 90 bp CTAAGCACGTTTCTGCTAACCAGTTGCCACAAACCCTCAGACATTCTGTGTATGGCACCTATGGTACTTTaGCTCTCTCCAGGTTCGTTT +
Preference number: 4 (lower is better)
Translates to: LSTFLLTSCHKPSDILCMAPMVL*LSPGSF
Trigger: AAACGAACCTGGAGAGAGCCAAAGTACCATAGGTGC...CATACACAGAATGTCTGAGGGTTTGTGGCAACTGGTTAGCAGAAACGTGCTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CCA 90 bp CTTCCCTCCACCACAGCCATACAAACTATCTGGCTCCCCTATACTTCTGTAGATAAGAACATCTTCCATTaGCAAGGGGTACTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: LPSTTAIQTIWLPYTSVDKNIFH*QGVLFS
Trigger: GGAGAAGAGTACCCCTTGCCAATGGAAGATGTTCTT...ATCTACAGAAGTATAGGGGAGCCAGATAGTTTGTATGGCTGTGGTGGAGGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CCA 90 bp GTAATGCCCATGCCATCCACAATATCTCTGGTGAGTCTAAAAGGAACTGTCTCACTGACGGAAGTGCAATaGTCCCACTGCATATTCCTC +
Preference number: 4 (lower is better)
Translates to: VMPMPSTISLVSLKGTVSLTEVQ*SHCIFL
Trigger: GAGGAATATGCAGTGGGACCATTGCACTTCCGTCAG...TGAGACAGTTCCTTTTAGACTCACCAGAGATATTGTGGATGGCATGGGCATTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CCA 90 bp ACTGTCTCAGGAGTAGGAAGGATTTTGCCCTGTTCAAAAGCAACACCTAGATCTCTGACGGAAGTGCAATaGTCCCACTGCATATTCCTC +
Preference number: 4 (lower is better)
Translates to: TVSGVGRILPCSKATPRSLTEVQ*SHCIFL
Trigger: GAGGAATATGCAGTGGGACCATTGCACTTCCGTCAG...AGATCTAGGTGTTGCTTTTGAACAGGGCAAAATCCTTCCTACTCCTGAGACAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CCA 90 bp AGGCAGGCAGTGGGAATTAAATGTACCTCCTTCCACCCCTGCCATAAAGGTGGGATGATTCATGGTAACTaGTTCCTTCTACTTCTTTGC +
Preference number: 4 (lower is better)
Translates to: RQAVGIKCTSFHPCHKGGMIHGN*FLLLLC
Trigger: GCAAAGAAGTAGAAGGAACCAGTTACCATGAATCAT...CCCACCTTTATGGCAGGGGTGGAAGGAGGTACATTTAATTCCCACTGCCTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CCA 90 bp CAGGCAGTGGGAATTAAATGTACCTCCTTCCACCCCTGCCATAAAGGTGGGACAGAGTCTTCCACTGAGTaGCATCTAAGTTTGCTAATA +
Preference number: 4 (lower is better)
Translates to: QAVGIKCTSFHPCHKGGTESSTE*HLSLLI
Trigger: TATTAGCAAACTTAGATGCCACTCAGTGGAAGACTC...TGTCCCACCTTTATGGCAGGGGTGGAAGGAGGTACATTTAATTCCCACTGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CCA 90 bp GATCTTGAGAAAAGCTCCCCAATGCTTTCCAGCTCTCCAATGGCCTGCAACCTGCCATATTCTCCTGTGTaGTCCACCTTAATTTCCATA +
Preference number: 4 (lower is better)
Translates to: DLEKSSPMLSSSPMACNLPYSPV*STLISI
Trigger: TATGGAAATTAAGGTGGACCACACAGGAGAATATGG...CAGGTTGCAGGCCATTGGAGAGCTGGAAAGCATTGGGGAGCTTTTCTCAAGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR CAA 72 bp TGCCCACTAGCACAAGGAGATGAGGAGGAAGTGTGTTaGCCTTGGCCTGGGAAATCTCCTATCAGTATTTAT +
Preference number: 4 (lower is better)
Translates to: CPLAQGDEEEVC*PWPGKSPISIY
Trigger: ATAAATACTGATAGGAGATTTCCCAGGCCAAGGCAAACACACTTCCTCCTCATCTCCTTGTGCTAGTGGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278616.8
ENST00000452508.6
ENST00000675843.1
3UTR CAA 72 bp ATTACACATCTGGAAGACCTGTTGCATGACAGCATCTaGTCTCAGGTCATCACGGCCCTTAACAAGCTGTCT +
Preference number: 4 (lower is better)
Translates to: ITHLEDLLHDSI*SQVITALNKLS
Trigger: AGACAGCTTGTTAAGGGCCGTGATGACCTGAGACAAGATGCTGTCATGCAACAGGTCTTCCAGATGTGTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp CACAAGGAGATGAGGAGGAAGTGTGTTTGCCTTGGCCTGGGAAATCTCCTATCAGTTTCAGATAGAGCCTaGAGTACACAGAGAACAATT +
Preference number: 4 (lower is better)
Translates to: HKEMRRKCVCLGLGNLLSVSDRA*STQRTI
Trigger: AATTGTTCTCTGTGTACTTCAGGCTCTATCTGAAAC...TGATAGGAGATTTCCCAGGCCAAGGCAAACACACTTCCTCCTCATCTCCTTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp GCCTCCCATCATCTTGGTCCCCATTCTAGCAGCCAATTGGTACATAAGAGGCAAGTTTCAGATAGAGCCTaGAGTACACAGAGAACAATT +
Preference number: 4 (lower is better)
Translates to: ASHHLGPHSSSQLVHKRQVSDRA*STQRTI
Trigger: AATTGTTCTCTGTGTACTTCAGGCTCTATCTGAAAC...TTGCCTCTTATGTACCAATTGGCTGCTAGAATGGGGACCAAGATGATGGGAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp CACAAGGAGATGAGGAGGAAGTGTGTTTGCCTTGGCCTGGGAAATCTCCTATCATCTATGAACATCTTGTaGAGGTTTCAGATAGAGCCT +
Preference number: 4 (lower is better)
Translates to: HKEMRRKCVCLGLGNLLSSMNIL*RFQIEP
Trigger: AGGCTCTATCTGAAACCTTCACAAGATGTTCATAGA...TGATAGGAGATTTCCCAGGCCAAGGCAAACACACTTCCTCCTCATCTCCTTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp TCTTTGCTGACGGAAGTGCAATGGTCCCACTGCATATTCCTCCATGCTGCTTGGCCTTTGGTAACAGCATaGATTATTCTAGCCACTAAA +
Preference number: 4 (lower is better)
Translates to: SLLTEVQWSHCIFLHAAWPLVTA*IILATK
Trigger: TTTAGTGGCTAGAATAATTCATGCTGTTACCAAAGG...CCAAGCAGCATGGAGGAATATGCAGTGGGACCATTGCACTTCCGTCAGCAAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp CCCTCCACCACAGCCATACAAACTATCTGGCTCCCCTATACTTCTGTAGATTTCTTTAATCCGTCAGTCTaGGAACAGCATCCTTTGGTA +
Preference number: 4 (lower is better)
Translates to: PSTTAIQTIWLPYTSVDFFNPSV*EQHPLV
Trigger: TACCAAAGGATGCTGTTCTCAGACTGACGGATTAAA...GAAATCTACAGAAGTATAGGGGAGCCAGATAGTTTGTATGGCTGTGGTGGAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp GTTTACGATCCTCTTTCAGTGCACGCAGGGCTAATTCATCCAACTCCAGCTCTCTCAACTAAACTACCCTaGATTATGGCTCCAAGTAAG +
Preference number: 4 (lower is better)
Translates to: VYDPLSVHAGLIHPTPALSTKLP*IMAPSK
Trigger: CTTACTTGGAGCCATAATTCAGGGTAGTTTAGTTGA...GAGAGCTGGAGTTGGATGAATTAGCCCTGCGTGCACTGAAAGAGGATCGTAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp AGCATCACAAAGTGCCTCAACACTTCTGACCATCTGAGGTCTCCTACTTCTGATAGATTCATGGATGACTaGTCCTCCACCTCCATTAGA +
Preference number: 4 (lower is better)
Translates to: SITKCLNTSDHLRSPTSDRFMDD*SSTSIR
Trigger: TCTAATGGAGGTGGAGGATCAGTCATCCATGAATCT...ATCAGAAGTAGGAGACCTCAGATGGTCAGAAGTGTTGAGGCACTTTGTGATGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp AGCATCACAAAGTGCCTCAACACTTCTGACCATCTGAGGTCTCCTACTTCTGATGAACAATCTATTGATTaGCTCTGCAGCCAACATGCG +
Preference number: 4 (lower is better)
Translates to: SITKCLNTSDHLRSPTSDEQSID*LCSQHA
Trigger: CGCATGTTGGCTGCAGAGTCAATCAATAGATTGTTC...ATCAGAAGTAGGAGACCTCAGATGGTCAGAAGTGTTGAGGCACTTTGTGATGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp GTTTACGATCCTCTTTCAGTGCACGCAGGGCTAATTCATCCAACTCCAGCTCTCACCTTTTTCACAAGGTaGGGTTCTAATCCATTCTCT +
Preference number: 4 (lower is better)
Translates to: VYDPLSVHAGLIHPTPALTFFTR*GSNPFS
Trigger: AGAGAATGGATTAGAACCTCACCTTGTGAAAAAGGT...GAGAGCTGGAGTTGGATGAATTAGCCCTGCGTGCACTGAAAGAGGATCGTAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp GTAATGCCCATGCCATCCACAATATCTCTGGTGAGTCTAAAAGGAACTGTCTCAAGGATCCAAATCCCCTaGAAAGTCACAGAGGTCAGT +
Preference number: 4 (lower is better)
Translates to: VMPMPSTISLVSLKGTVSRIQIP*KVTEVS
Trigger: ACTGACCTCTGTGACTTTTCAGGGGATTTGGATCCT...TGAGACAGTTCCTTTTAGACTCACCAGAGATATTGTGGATGGCATGGGCATTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp CCCTCCACCACAGCCATACAAACTATCTGGCTCCCCTATACTTCTGTAGATTTCGTAATGACACATCCATaGTACAAGAAGGCCTTTGGT +
Preference number: 4 (lower is better)
Translates to: PSTTAIQTIWLPYTSVDFVMTHP*YKKAFG
Trigger: ACCAAAGGCCTTCTTGTATCATGGATGTGTCATTAC...GAAATCTACAGAAGTATAGGGGAGCCAGATAGTTTGTATGGCTGTGGTGGAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp TTGTTCGCTGCACAGCTGGCATCCAACTTCTTGATCATTTGCTTGAGAATACTCGTCGAAGACAGCTGGTaGAAAATCCCTGAACATGTG +
Preference number: 4 (lower is better)
Translates to: LFAAQLASNFLIICLRILVEDSW*KIPEHV
Trigger: CACATGTTCAGGGATTTTTCACCAGCTGTCTTCGAC...GAGTATTCTCAAGCAAATGATCAAGAAGTTGGATGCCAGCTGTGCAGCGAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp CTCCACCACAGCCATACAAACTATCTGGCTCCCCTATACTTCTGTAGATTTCTAGTCGAAGACAGCTGGTaGAAAATCCCTGAACATGTG +
Preference number: 4 (lower is better)
Translates to: LHHSHTNYLAPLYFCRFLVEDSW*KIPEHV
Trigger: CACATGTTCAGGGATTTTTCACCAGCTGTCTTCGAC...TAGAAATCTACAGAAGTATAGGGGAGCCAGATAGTTTGTATGGCTGTGGTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000527805.6
ENST00000529588.5
ENST00000675595.1
CDS-3UTR TCA 90 bp AAAGGCATCAATCAAATATTCTGCCCACTAGCACAAGGAGATGAGGAGGAAGTGGTCGAAGACAGCTGGTaGAAAATCCCTGAACATGTG +
Preference number: 4 (lower is better)
Translates to: KGINQIFCPLAQGDEEEVVEDSW*KIPEHV
Trigger: CACATGTTCAGGGATTTTTCACCAGCTGTCTTCGAC...CACTTCCTCCTCATCTCCTTGTGCTAGTGGGCAGAATATTTGATTGATGCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp AGCCAAGAAATTAAAATAAGAATGGGCTTGTGTGCAGCAACAGCCCTGGGAATACTTCTACTTCTTTGCTaGCGGAAGTGCAATGGTCCC +
Preference number: 4 (lower is better)
Translates to: SQEIKIRMGLCAATALGILLLLC*RKCNGP
Trigger: GGGACCATTGCACTTCCGTCAGCAAAGAAGTAGAAG...TATTCCCAGGGCTGTTGCTGCACACAAGCCCATTCTTATTTTAATTTCTTGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp AAAGGCATCAATCAAATATTCTGCCCACTAGCACAAGGAGATGAGGAGGAAGTGAACTCCAGCTCTCGCTaGACCTTTACTGTGTATCTG +
Preference number: 4 (lower is better)
Translates to: KGINQIFCPLAQGDEEEVNSSSR*TFTVYL
Trigger: CAGATACACAGTAAAGGTTCAGCGAGAGCTGGAGTT...CACTTCCTCCTCATCTCCTTGTGCTAGTGGGCAGAATATTTGATTGATGCCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp AAAGGCATCAATCAAATATTCTGCCCACTAGCACAAGGAGATGAGGAGGAAGTGCGATCCTCATCAAGCTaGGAGCTTTGTTTAGGCACA +
Preference number: 4 (lower is better)
Translates to: KGINQIFCPLAQGDEEEVRSSSS*ELCLGT
Trigger: TGTGCCTAAACAAAGCTCTCAGCTTGATGAGGATCG...CACTTCCTCCTCATCTCCTTGTGCTAGTGGGCAGAATATTTGATTGATGCCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp GTTTACGATCCTCTTTCAGTGCACGCAGGGCTAATTCATCCAACTCCAGCTCTCGGCCTGTATCTTTTATaGGCACCATCTTCATTGTTA +
Preference number: 4 (lower is better)
Translates to: VYDPLSVHAGLIHPTPALGLYLL*APSSLL
Trigger: TAACAATGAAGATGGTGCTCATAAAAGATACAGGCC...GAGAGCTGGAGTTGGATGAATTAGCCCTGCGTGCACTGAAAGAGGATCGTAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp ACCTGTTGCATGACAGCATCTTGTCTCAGGTCATCACGGCCCTTAACAAGCTGTGGCCTGTATCTTTTATaGGCACCATCTTCATTGTTA +
Preference number: 4 (lower is better)
Translates to: TCCMTASCLRSSRPLTSCGLYLL*APSSLL
Trigger: TAACAATGAAGATGGTGCTCATAAAAGATACAGGCC...ACAGCTTGTTAAGGGCCGTGATGACCTGAGACAAGATGCTGTCATGCAACAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp ACTGTCTCAGGAGTAGGAAGGATTTTGCCCTGTTCAAAAGCAACACCTAGATCTGGCACTGAAAGGCACTaGAATCATTTGGCCTGTATC +
Preference number: 4 (lower is better)
Translates to: TVSGVGRILPCSKATPRSGTERH*NHLACI
Trigger: GATACAGGCCAAATGATTTCAGTGCCTTTCAGTGCC...AGATCTAGGTGTTGCTTTTGAACAGGGCAAAATCCTTCCTACTCCTGAGACAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp CAAGCCAGAGGGAACAAAGTCGGAATACCCACATATCATGTTCTTCTCCACTTAGGCACTGAAAGGCACTaGAATCATTTGGCCTGTATC +
Preference number: 4 (lower is better)
Translates to: QARGNKVGIPTYHVLLHLGTERH*NHLACI
Trigger: GATACAGGCCAAATGATTTCAGTGCCTTTCAGTGCC...TAAGTGGAGAAGAACATGATATGTGGGTATTCCGACTTTGTTCCCTCTGGCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp CAGGCAGTGGGAATTAAATGTACCTCCTTCCACCCCTGCCATAAAGGTGGGACAATGTACAAGTTCTGCTaGCTGCTCATTTATCAAGAT +
Preference number: 4 (lower is better)
Translates to: QAVGIKCTSFHPCHKGGTMYKFC*LLIYQD
Trigger: ATCTTGATAAATGAGCAGTCAGCAGAACTTGTACAT...TGTCCCACCTTTATGGCAGGGGTGGAAGGAGGTACATTTAATTCCCACTGCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp ATCCAACTTCTTGATCATTTGCTTGAGAATACTCAGGGCAAGACTCTGCTCCTTTCTCACAGCATCTTCTaGAGACACCTTCAACACCCG +
Preference number: 4 (lower is better)
Translates to: IQLLDHLLENTQGKTLLLSHSIF*RHLQHP
Trigger: CGGGTGTTGAAGGTGTCTTCAGAAGATGCTGTGAGA...AAGGAGCAGAGTCTTGCCCTGAGTATTCTCAAGCAAATGATCAAGAAGTTGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp AAAGGCATCAATCAAATATTCTGCCCACTAGCACAAGGAGATGAGGAGGAAGTGGCATTCAGAGTAGGGTaGAGCTCAGTTTCATCTTCC +
Preference number: 4 (lower is better)
Translates to: KGINQIFCPLAQGDEEEVAFRVG*SSVSSS
Trigger: GGAAGATGAAACTGAGCTTCACCCTACTCTGAATGC...CACTTCCTCCTCATCTCCTTGTGCTAGTGGGCAGAATATTTGATTGATGCCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp ATTAGAATACTTGAACAGAACAGGAGCCTCATAGCATACCATGCAAGGCTAAAGCTTGTCCACCAACACTaGGCACAGTGCCTTCTTCCA +
Preference number: 4 (lower is better)
Translates to: IRILEQNRSLIAYHARLKLVHQH*AQCLLP
Trigger: TGGAAGAAGGCACTGTGCTCAGTGTTGGTGGACAAG...CTTTAGCCTTGCATGGTATGCTATGAGGCTCCTGTTCTGTTCAAGTATTCTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp CTCAATCACCCATTTGTTAATCTCCGCAGCTGGGATGAACATTTTCCTAAGGATACTAGCACAAGGAGATaGGGAGGAAGTGTGTTTGCC +
Preference number: 4 (lower is better)
Translates to: LNHPFVNLRSWDEHFPKDTSTRR*GGSVFA
Trigger: GGCAAACACACTTCCTCCTCATCTCCTTGTGCTAGT...ATCCTTAGGAAAATGTTCATCCCAGCTGCGGAGATTAACAAATGGGTGATTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp CTCCACCACAGCCATACAAACTATCTGGCTCCCCTATACTTCTGTAGATTTCTATTCCTGAAGAAGGTCTaGATCCAAGTTTGCAGGGGT +
Preference number: 4 (lower is better)
Translates to: LHHSHTNYLAPLYFCRFLFLKKV*IQVCRG
Trigger: ACCCCTGCAAACTTGGATTCAGACCTTCTTCAGGAA...TAGAAATCTACAGAAGTATAGGGGAGCCAGATAGTTTGTATGGCTGTGGTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529588.5
CDS-3UTR TCA 90 bp TACCTACTGAACCCAAATATGTCTGTATCACAGCACATTATGAACTCTGGTTTATGGGTCGCACACGACTaGATTTCCCAGCGCAGAAGC +
Preference number: 4 (lower is better)
Translates to: YLLNPNMSVSQHIMNSGLWVAHD*ISQRRS
Trigger: GCTTCTGCGCTGGGAAATTCAGTCGTGTGCGACCCA...TAAACCAGAGTTCATAATGTGCTGTGATACAGACATATTTGGGTTCAGTAGGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530958.5
CDS-3UTR TCA 90 bp TACCTACTGAACCCAAATATGTCTGTATCACAGCACATTATGAACTCTGGTTTACACTGGTGGTTCTTCTaGCTTCCCCCATCCCCCAAC +
Preference number: 4 (lower is better)
Translates to: YLLNPNMSVSQHIMNSGLHWWFF*LPPSPN
Trigger: GTTGGGGGATGGGGGAAGTCAGAAGAACCACCAGTG...TAAACCAGAGTTCATAATGTGCTGTGATACAGACATATTTGGGTTCAGTAGGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000530958.5
CDS-3UTR GCA 90 bp CTCCACCACAGCCATACAAACTATCTGGCTCCCCTATACTTCTGTAGATTTCTATCCTGCATCTTTTTCTaGCTGGAGGCTTGTGTTGAG +
Preference number: 4 (lower is better)
Translates to: LHHSHTNYLAPLYFCRFLSCIFF*LEACVE
Trigger: CTCAACACAAGCCTCCAGGCAGAAAAAGATGCAGGA...TAGAAATCTACAGAAGTATAGGGGAGCCAGATAGTTTGTATGGCTGTGGTGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR GCA 90 bp CCCTCCACCACAGCCATACAAACTATCTGGCTCCCCTATACTTCTGTAGATTTCTATACTGGTGGTCAGTaGCAAAGTCAAACAGCATAC +
Preference number: 4 (lower is better)
Translates to: PSTTAIQTIWLPYTSVDFYTGGQ*QSQTAY
Trigger: GTATGCTGTTTGACTTTGGCACTGACCACCAGTATA...GAAATCTACAGAAGTATAGGGGAGCCAGATAGTTTGTATGGCTGTGGTGGAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR GCA 90 bp CAGGCAGTGGGAATTAAATGTACCTCCTTCCACCCCTGCCATAAAGGTGGGACAATTATTTGTTTCAGCTaGTTGCTCACATATGGCAAG +
Preference number: 4 (lower is better)
Translates to: QAVGIKCTSFHPCHKGGTIICFS*LLTYGK
Trigger: CTTGCCATATGTGAGCAAGCAGCTGAAACAAATAAT...TGTCCCACCTTTATGGCAGGGGTGGAAGGAGGTACATTTAATTCCCACTGCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR GCA 90 bp TCTTTGCTGACGGAAGTGCAATGGTCCCACTGCATATTCCTCCATGCTGCTTGGGCCATCTTGGATAACTaGAACAAATTGACAACTAGT +
Preference number: 4 (lower is better)
Translates to: SLLTEVQWSHCIFLHAAWAILDN*NKLTTS
Trigger: ACTAGTTGTCAATTTGTTGCAGTTATCCAAGATGGC...CCAAGCAGCATGGAGGAATATGCAGTGGGACCATTGCACTTCCGTCAGCAAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR GCA 90 bp CAGGCAGTGGGAATTAAATGTACCTCCTTCCACCCCTGCCATAAAGGTGGGACAGCCATCTTGGATAACTaGAACAAATTGACAACTAGT +
Preference number: 4 (lower is better)
Translates to: QAVGIKCTSFHPCHKGGTAILDN*NKLTTS
Trigger: ACTAGTTGTCAATTTGTTGCAGTTATCCAAGATGGC...TGTCCCACCTTTATGGCAGGGGTGGAAGGAGGTACATTTAATTCCCACTGCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR GCA 90 bp GTTTACGATCCTCTTTCAGTGCACGCAGGGCTAATTCATCCAACTCCAGCTCTCCATATTCCTCCATGCTaGTTGGTAATGAAGTTCTTC +
Preference number: 4 (lower is better)
Translates to: VYDPLSVHAGLIHPTPALHIPPC*LVMKFF
Trigger: GAAGAACTTCATTACCAAGCAGCATGGAGGAATATG...GAGAGCTGGAGTTGGATGAATTAGCCCTGCGTGCACTGAAAGAGGATCGTAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR GCA 90 bp CTCCACCACAGCCATACAAACTATCTGGCTCCCCTATACTTCTGTAGATTTCTAAGAAAAGCTCCCCAATaGTTTCCAGCTCTCCAATGG +
Preference number: 4 (lower is better)
Translates to: LHHSHTNYLAPLYFCRFLRKAPQ*FPALQW
Trigger: CCATTGGAGAGCTGGAAAGCATTGGGGAGCTTTTCT...TAGAAATCTACAGAAGTATAGGGGAGCCAGATAGTTTGTATGGCTGTGGTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR GCA 90 bp AAAGGCATCAATCAAATATTCTGCCCACTAGCACAAGGAGATGAGGAGGAAGTGAGAAAAGCTCCCCAATaGTTTCCAGCTCTCCAATGG +
Preference number: 4 (lower is better)
Translates to: KGINQIFCPLAQGDEEEVRKAPQ*FPALQW
Trigger: CCATTGGAGAGCTGGAAAGCATTGGGGAGCTTTTCT...CACTTCCTCCTCATCTCCTTGTGCTAGTGGGCAGAATATTTGATTGATGCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR GCA 90 bp AGGCAGGCAGTGGGAATTAAATGTACCTCCTTCCACCCCTGCCATAAAGGTGGGTTTAATTTGAAATATTaGCCTTTCAGGGAGCTGAGT +
Preference number: 4 (lower is better)
Translates to: RQAVGIKCTSFHPCHKGGFNLKY*PFRELS
Trigger: ACTCAGCTCCCTGAAAGGGCAATATTTCAAATTAAA...CCCACCTTTATGGCAGGGGTGGAAGGAGGTACATTTAATTCCCACTGCCTGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR GCA 90 bp ATTAGAATACTTGAACAGAACAGGAGCCTCATAGCATACCATGCAAGGCTAAAGTGTGCTTCTTCCAGCTaGCACTCAGAGACTCCACAG +
Preference number: 4 (lower is better)
Translates to: IRILEQNRSLIAYHARLKCASSS*HSETPQ
Trigger: CTGTGGAGTCTCTGAGTGGCAGCTGGAAGAAGCACA...CTTTAGCCTTGCATGGTATGCTATGAGGCTCCTGTTCTGTTCAAGTATTCTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR GCA 90 bp CTCAATCACCCATTTGTTAATCTCCGCAGCTGGGATGAACATTTTCCTAAGGATTGCCCAGAATACTTGTaGTTCTTCCAGCTGCCACTC +
Preference number: 4 (lower is better)
Translates to: LNHPFVNLRSWDEHFPKDCPEYL*FFQLPL
Trigger: GAGTGGCAGCTGGAAGAAGCACAAGTATTCTGGGCA...ATCCTTAGGAAAATGTTCATCCCAGCTGCGGAGATTAACAAATGGGTGATTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR GCA 90 bp TCTTTGCTGACGGAAGTGCAATGGTCCCACTGCATATTCCTCCATGCTGCTTGGCTTTTCAGGAGAGCTTaGTTGTTTTCAAATTCCGAT +
Preference number: 4 (lower is better)
Translates to: SLLTEVQWSHCIFLHAAWLFRRA*LFSNSD
Trigger: ATCGGAATTTGAAAACAAGCAAGCTCTCCTGAAAAG...CCAAGCAGCATGGAGGAATATGCAGTGGGACCATTGCACTTCCGTCAGCAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR GCA 90 bp CAGGCAGTGGGAATTAAATGTACCTCCTTCCACCCCTGCCATAAAGGTGGGACACTTTTCAGGAGAGCTTaGTTGTTTTCAAATTCCGAT +
Preference number: 4 (lower is better)
Translates to: QAVGIKCTSFHPCHKGGTLFRRA*LFSNSD
Trigger: ATCGGAATTTGAAAACAAGCAAGCTCTCCTGAAAAG...TGTCCCACCTTTATGGCAGGGGTGGAAGGAGGTACATTTAATTCCCACTGCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR GCA 90 bp CACAAGGAGATGAGGAGGAAGTGTGTTTGCCTTGGCCTGGGAAATCTCCTATCAATAAGCATCACAAAGTaGCTCAACACTTCTGACCAT +
Preference number: 4 (lower is better)
Translates to: HKEMRRKCVCLGLGNLLSISITK*LNTSDH
Trigger: ATGGTCAGAAGTGTTGAGGCACTTTGTGATGCTTAT...TGATAGGAGATTTCCCAGGCCAAGGCAAACACACTTCCTCCTCATCTCCTTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR GCA 90 bp CAGGCAGTGGGAATTAAATGTACCTCCTTCCACCCCTGCCATAAAGGTGGGACAAGTAATTGGCTGGTCTaGTGGAATATTTATGCCTTT +
Preference number: 4 (lower is better)
Translates to: QAVGIKCTSFHPCHKGGTSNWLV*WNIYAF
Trigger: AAAGGCATAAATATTCCAGCAGACCAGCCAATTACT...TGTCCCACCTTTATGGCAGGGGTGGAAGGAGGTACATTTAATTCCCACTGCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR GCA 90 bp GCTTCTTCTGGCTACCTCTGGTTTAGTCAGAAATTCATCTCTGTTTGCATTTGCTGGGGACAGTTCCTGTaGACCATTCAAGAACACCAC +
Preference number: 4 (lower is better)
Translates to: ASSGYLWFSQKFISVCICWGQFL*TIQEHH
Trigger: GTGGTGTTCTTGAATGGTGCACAGGAACTGTCCCCA...GCAAATGCAAACAGAGATGAATTTCTGACTAAACCAGAGGTAGCCAGAAGAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR GCA 90 bp GAGTTGTCCATTTCCTTTTCCATCAGGATCTCCAAAATGACTGTGCGTAGAGCCACACATCACTGTCACTaGACTCGGAAGGTCAAAGTA +
Preference number: 4 (lower is better)
Translates to: ELSISFSIRISKMTVRRATHHCH*TRKVKV
Trigger: TACTTTGACCTTCCGAGTGCAGTGACAGTGATGTGT...GGCTCTACGCACAGTCATTTTGGAGATCCTGATGGAAAAGGAAATGGACAACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR GCA 90 bp TACCTACTGAACCCAAATATGTCTGTATCACAGCACATTATGAACTCTGGTTTACCGCGCCCCTACCACTaGACTCGGAAGGTCAAAGTA +
Preference number: 4 (lower is better)
Translates to: YLLNPNMSVSQHIMNSGLPRPYH*TRKVKV
Trigger: TACTTTGACCTTCCGAGTGCAGTGGTAGGGGCGCGG...TAAACCAGAGTTCATAATGTGCTGTGATACAGACATATTTGGGTTCAGTAGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530958.5
CDS-3UTR CCA 90 bp CTCAATCACCCATTTGTTAATCTCCGCAGCTGGGATGAACATTTTCCTAAGGATGCATCTTTTTCTGCCTaGAGGCTTGTGTTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: LNHPFVNLRSWDEHFPKDASFSA*RLVLRL
Trigger: CAGCCTCAACACAAGCCTCCAGGCAGAAAAAGATGC...ATCCTTAGGAAAATGTTCATCCCAGCTGCGGAGATTAACAAATGGGTGATTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CCA 90 bp CACAAGGAGATGAGGAGGAAGTGTGTTTGCCTTGGCCTGGGAAATCTCCTATCATATTTGGACTCTTCTTaGTACAGTTGCTCAAGCAAC +
Preference number: 4 (lower is better)
Translates to: HKEMRRKCVCLGLGNLLSYLDSS*YSCSSN
Trigger: GTTGCTTGAGCAACTGTACCAAGAAGAGTCCAAATA...TGATAGGAGATTTCCCAGGCCAAGGCAAACACACTTCCTCCTCATCTCCTTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CCA 90 bp CATCTTCCCTCCACCACAGCCATACAAACTATCTGGCTCCCCTATACTTCTGTATTCTCCACGGTCAAATaGCTTTTTGATGAAGGATGC +
Preference number: 4 (lower is better)
Translates to: HLPSTTAIQTIWLPYTSVFSTVK*LFDEGC
Trigger: GCATCCTTCATCAAAAAGCCATTTGACCGTGGAGAA...TACAGAAGTATAGGGGAGCCAGATAGTTTGTATGGCTGTGGTGGAGGGAAGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CCA 90 bp CTTCCCTCCACCACAGCCATACAAACTATCTGGCTCCCCTATACTTCTGTAGATTCTCCCTTCGTGTCCTaGAACAATCTATTGATTGAC +
Preference number: 4 (lower is better)
Translates to: LPSTTAIQTIWLPYTSVDSPFVS*NNLLID
Trigger: GTCAATCAATAGATTGTTCCAGGACACGAAGGGAGA...ATCTACAGAAGTATAGGGGAGCCAGATAGTTTGTATGGCTGTGGTGGAGGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CCA 90 bp CTAAGCACGTTTCTGCTAACCAGTTGCCACAAACCCTCAGACATTCTGTGTATGGGGTTCTCAGCACTATaGGACATTTCTCTCATTCCT +
Preference number: 4 (lower is better)
Translates to: LSTFLLTSCHKPSDILCMGFSAL*DISLIP
Trigger: AGGAATGAGAGAAATGTCCCATAGTGCTGAGAACCC...CATACACAGAATGTCTGAGGGTTTGTGGCAACTGGTTAGCAGAAACGTGCTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CCA 90 bp GCTGGCATCCAACTTCTTGATCATTTGCTTGAGAATACTCAGGGCAAGACTCTGGGGTTCTCAGCACTATaGGACATTTCTCTCATTCCT +
Preference number: 4 (lower is better)
Translates to: AGIQLLDHLLENTQGKTLGFSAL*DISLIP
Trigger: AGGAATGAGAGAAATGTCCCATAGTGCTGAGAACCC...CAGAGTCTTGCCCTGAGTATTCTCAAGCAAATGATCAAGAAGTTGGATGCCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CCA 90 bp ATTAGAATACTTGAACAGAACAGGAGCCTCATAGCATACCATGCAAGGCTAAAGAGTTTGCAGGGGTTGTaGATCGGCTCGTTTGCGAGA +
Preference number: 4 (lower is better)
Translates to: IRILEQNRSLIAYHARLKSLQGL*IGSFAR
Trigger: TCTCGCAAACGAGCCGATCCACAACCCCTGCAAACT...CTTTAGCCTTGCATGGTATGCTATGAGGCTCCTGTTCTGTTCAAGTATTCTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CCA 90 bp TCTTCCCTCCACCACAGCCATACAAACTATCTGGCTCCCCTATACTTCTGTAGAGCCATACAAACTATCTaGCTCCCCTATACTTCTGTA +
Preference number: 4 (lower is better)
Translates to: SSLHHSHTNYLAPLYFCRAIQTI*LPYTSV
Trigger: TACAGAAGTATAGGGGAGCCAGATAGTTTGTATGGC...TCTACAGAAGTATAGGGGAGCCAGATAGTTTGTATGGCTGTGGTGGAGGGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000527805.6
ENST00000529588.5
ENST00000675595.1
CDS-3UTR CCA 90 bp CACAAGGAGATGAGGAGGAAGTGTGTTTGCCTTGGCCTGGGAAATCTCCTATCAGAGTCTTCCACTGAGTaGCATCTAAGTTTGCTAATA +
Preference number: 4 (lower is better)
Translates to: HKEMRRKCVCLGLGNLLSESSTE*HLSLLI
Trigger: TATTAGCAAACTTAGATGCCACTCAGTGGAAGACTC...TGATAGGAGATTTCCCAGGCCAAGGCAAACACACTTCCTCCTCATCTCCTTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CCA 90 bp CACAAGGAGATGAGGAGGAAGTGTGTTTGCCTTGGCCTGGGAAATCTCCTATCACCATATTCTCCTGTGTaGTCCACCTTAATTTCCATA +
Preference number: 4 (lower is better)
Translates to: HKEMRRKCVCLGLGNLLSPYSPV*STLISI
Trigger: TATGGAAATTAAGGTGGACCACACAGGAGAATATGG...TGATAGGAGATTTCCCAGGCCAAGGCAAACACACTTCCTCCTCATCTCCTTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CCA 90 bp TTGTTCGCTGCACAGCTGGCATCCAACTTCTTGATCATTTGCTTGAGAATACTCCAAGAAATTCACCAATaGGGACAGTTCCTGTGCACC +
Preference number: 4 (lower is better)
Translates to: LFAAQLASNFLIICLRILQEIHQ*GQFLCT
Trigger: GGTGCACAGGAACTGTCCCCATTGGTGAATTTCTTG...GAGTATTCTCAAGCAAATGATCAAGAAGTTGGATGCCAGCTGTGCAGCGAACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CCA 90 bp ACCTGTTGCATGACAGCATCTTGTCTCAGGTCATCACGGCCCTTAACAAGCTGTTTCTCATCACTTCCATaGTTTTCTCACAGCATCTTC +
Preference number: 4 (lower is better)
Translates to: TCCMTASCLRSSRPLTSCFSSLP*FSHSIF
Trigger: GAAGATGCTGTGAGAAAACCATGGAAGTGATGAGAA...ACAGCTTGTTAAGGGCCGTGATGACCTGAGACAAGATGCTGTCATGCAACAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CCA 90 bp CACAAGGAGATGAGGAGGAAGTGTGTTTGCCTTGGCCTGGGAAATCTCCTATCATTATCTCCCTTAATCTaGACACAACTGTTCAAGCAG +
Preference number: 4 (lower is better)
Translates to: HKEMRRKCVCLGLGNLLSLSPLI*TQLFKQ
Trigger: CTGCTTGAACAGTTGTGTCCAGATTAAGGGAGATAA...TGATAGGAGATTTCCCAGGCCAAGGCAAACACACTTCCTCCTCATCTCCTTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
3UTR CAA 72 bp GGGATTGCTGTTTCGAGGTCATATGTTACTAGGGCTTaGCCCCACATTGCTTCGTGTTCATATGTTCGTAGT +
Preference number: 4 (lower is better)
Translates to: GIAVSRSYVTRA*PHIASCSYVRS
Trigger: ACTACGAACATATGAACACGAAGCAATGTGGGGCAAAGCCCTAGTAACATATGACCTCGAAACAGCAATCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR CAA 72 bp AGGTCATCACGGCCCTTAACAAGCTGTCTCCTCTCCTaGCCATCGGAACCTACACAATCTATTATTTTTGGT +
Preference number: 4 (lower is better)
Translates to: RSSRPLTSCLLS*PSEPTQSIIFG
Trigger: ACCAAAAATAATAGATTGTGTAGGTTCCGATGGCAAGGAGAGGAGACAGCTTGTTAAGGGCCGTGATGACCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp GCTAACCAGTTGCCACAAACCCTCAGACATTCTGTGTATGTAAGTTTTAGGCTGCTATCATGTTCTAGTTaGCGGCAGCAGATAAGCAGA +
Preference number: 4 (lower is better)
Translates to: ANQLPQTLRHSVYVSFRLLSCSS*RQQISR
Trigger: TCTGCTTATCTGCTGCCGTCAACTAGAACATGATAG...CAGCCTAAAACTTACATACACAGAATGTCTGAGGGTTTGTGGCAACTGGTTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp CCCTCCACCACAGCCATACAAACTATCTGGCTCCCCTATACTTCTGTAGATTTCTCTAACCACTGTTGCTaGGATATTTCACACCAGTAT +
Preference number: 4 (lower is better)
Translates to: PSTTAIQTIWLPYTSVDFSNHCC*DISHQY
Trigger: ATACTGGTGTGAAATATCTCAGCAACAGTGGTTAGA...GAAATCTACAGAAGTATAGGGGAGCCAGATAGTTTGTATGGCTGTGGTGGAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527805.6
CDS-3UTR TCA 90 bp ATTAGAATACTTGAACAGAACAGGAGCCTCATAGCATACCATGCAAGGCTAAAGACCCACCAAAAGACGTaGACACCGGACAAGAGTTTC +
Preference number: 4 (lower is better)
Translates to: IRILEQNRSLIAYHARLKTHQKT*TPDKSF
Trigger: GAAACTCTTGTCCGGTGTTCACGTCTTTTGGTGGGT...CTTTAGCCTTGCATGGTATGCTATGAGGCTCCTGTTCTGTTCAAGTATTCTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp TTGTTCGCTGCACAGCTGGCATCCAACTTCTTGATCATTTGCTTGAGAATACTCGAACAATCTATTGATTaGCTCTGCAGCCAACATGCG +
Preference number: 4 (lower is better)
Translates to: LFAAQLASNFLIICLRILEQSID*LCSQHA
Trigger: CGCATGTTGGCTGCAGAGTCAATCAATAGATTGTTC...GAGTATTCTCAAGCAAATGATCAAGAAGTTGGATGCCAGCTGTGCAGCGAACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp CAAGCCAGAGGGAACAAAGTCGGAATACCCACATATCATGTTCTTCTCCACTTACCTGGAACAATCTATTaGTTGACTCTGCAGCCAACA +
Preference number: 4 (lower is better)
Translates to: QARGNKVGIPTYHVLLHLPGTIY*LTLQPT
Trigger: TGTTGGCTGCAGAGTCAATCAATAGATTGTTCCAGG...TAAGTGGAGAAGAACATGATATGTGGGTATTCCGACTTTGTTCCCTCTGGCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp GCTAACCAGTTGCCACAAACCCTCAGACATTCTGTGTATGTAAGTTTTAGGCTGCCTGGAACAATCTATTaGTTGACTCTGCAGCCAACA +
Preference number: 4 (lower is better)
Translates to: ANQLPQTLRHSVYVSFRLPGTIY*LTLQPT
Trigger: TGTTGGCTGCAGAGTCAATCAATAGATTGTTCCAGG...CAGCCTAAAACTTACATACACAGAATGTCTGAGGGTTTGTGGCAACTGGTTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp AAAGGCATCAATCAAATATTCTGCCCACTAGCACAAGGAGATGAGGAGGAAGTGCCTGGAACAATCTATTaGTTGACTCTGCAGCCAACA +
Preference number: 4 (lower is better)
Translates to: KGINQIFCPLAQGDEEEVPGTIY*LTLQPT
Trigger: TGTTGGCTGCAGAGTCAATCAATAGATTGTTCCAGG...CACTTCCTCCTCATCTCCTTGTGCTAGTGGGCAGAATATTTGATTGATGCCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp CACAAGGAGATGAGGAGGAAGTGTGTTTGCCTTGGCCTGGGAAATCTCCTATCAGTACCAACAATAACATaGAGATGGTTTTCTAGAGCA +
Preference number: 4 (lower is better)
Translates to: HKEMRRKCVCLGLGNLLSVPTIT*RWFSRA
Trigger: TGCTCTAGAAAACCATCTTCATGTTATTGTTGGTAC...TGATAGGAGATTTCCCAGGCCAAGGCAAACACACTTCCTCCTCATCTCCTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp ATTGTTCGCTGCACAGCTGGCATCCAACTTCTTGATCATTTGCTTGAGAATACTTCCAATACCTGTTTCTaGACCTCCACCTGCTCATAC +
Preference number: 4 (lower is better)
Translates to: IVRCTAGIQLLDHLLENTSNTCF*TSTCSY
Trigger: GTATGAGCAGGTGGAGGTTCAGAAACAGGTATTGGA...AGTATTCTCAAGCAAATGATCAAGAAGTTGGATGCCAGCTGTGCAGCGAACAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675595.1
CDS-3UTR TCA 90 bp AGCCAAGAAATTAAAATAAGAATGGGCTTGTGTGCAGCAACAGCCCTGGGAATATCCAATACCTGTTTCTaGACCTCCACCTGCTCATAC +
Preference number: 4 (lower is better)
Translates to: SQEIKIRMGLCAATALGISNTCF*TSTCSY
Trigger: GTATGAGCAGGTGGAGGTTCAGAAACAGGTATTGGA...TATTCCCAGGGCTGTTGCTGCACACAAGCCCATTCTTATTTTAATTTCTTGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp ACTGTCTCAGGAGTAGGAAGGATTTTGCCCTGTTCAAAAGCAACACCTAGATCTGGTAGGTCAGCATTATaGAGGTCCACTGAAGTTCTT +
Preference number: 4 (lower is better)
Translates to: TVSGVGRILPCSKATPRSGRSAL*RSTEVL
Trigger: AAGAACTTCAGTGGACCTTCATAATGCTGACCTACC...AGATCTAGGTGTTGCTTTTGAACAGGGCAAAATCCTTCCTACTCCTGAGACAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp TCTAAGCACGTTTCTGCTAACCAGTTGCCACAAACCCTCAGACATTCTGTGTATACAGGTAACAGCTGCTaGTCGAACTTTGACACAATC +
Preference number: 4 (lower is better)
Translates to: SKHVSANQLPQTLRHSVYTGNSC*SNFDTI
Trigger: GATTGTGTCAAAGTTCGATCAGCAGCTGTTACCTGT...ATACACAGAATGTCTGAGGGTTTGTGGCAACTGGTTAGCAGAAACGTGCTTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp GTTTACGATCCTCTTTCAGTGCACGCAGGGCTAATTCATCCAACTCCAGCTCTCAAGCAGATTTCTCCATaGTTCATTTGTATCTTGGAG +
Preference number: 4 (lower is better)
Translates to: VYDPLSVHAGLIHPTPALKQISP*FICILE
Trigger: CTCCAAGATACAAATGAATCATGGAGAAATCTGCTT...GAGAGCTGGAGTTGGATGAATTAGCCCTGCGTGCACTGAAAGAGGATCGTAAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp GCTGGCATCCAACTTCTTGATCATTTGCTTGAGAATACTCAGGGCAAGACTCTGCTGGTGAAAAATCCCTaGACATGTGTAGAAAGCAGA +
Preference number: 4 (lower is better)
Translates to: AGIQLLDHLLENTQGKTLLVKNP*TCVESR
Trigger: TCTGCTTTCTACACATGTTCAGGGATTTTTCACCAG...CAGAGTCTTGCCCTGAGTATTCTCAAGCAAATGATCAAGAAGTTGGATGCCAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp ACTGTCTCAGGAGTAGGAAGGATTTTGCCCTGTTCAAAAGCAACACCTAGATCTGCCATGATAGGCTCCTaGAAACTAAAATCACTGTCC +
Preference number: 4 (lower is better)
Translates to: TVSGVGRILPCSKATPRSAMIGS*KLKSLS
Trigger: GGACAGTGATTTTAGTTTTCAGGAGCCTATCATGGC...AGATCTAGGTGTTGCTTTTGAACAGGGCAAAATCCTTCCTACTCCTGAGACAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp ATTGTTCGCTGCACAGCTGGCATCCAACTTCTTGATCATTTGCTTGAGAATACTCGATCCTCATCAAGCTaGGAGCTTTGTTTAGGCACA +
Preference number: 4 (lower is better)
Translates to: IVRCTAGIQLLDHLLENTRSSSS*ELCLGT
Trigger: TGTGCCTAAACAAAGCTCTCAGCTTGATGAGGATCG...AGTATTCTCAAGCAAATGATCAAGAAGTTGGATGCCAGCTGTGCAGCGAACAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp CTCAATCACCCATTTGTTAATCTCCGCAGCTGGGATGAACATTTTCCTAAGGATGGCACTGAAAGGCACTaGAATCATTTGGCCTGTATC +
Preference number: 4 (lower is better)
Translates to: LNHPFVNLRSWDEHFPKDGTERH*NHLACI
Trigger: GATACAGGCCAAATGATTTCAGTGCCTTTCAGTGCC...ATCCTTAGGAAAATGTTCATCCCAGCTGCGGAGATTAACAAATGGGTGATTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp ATTAGAATACTTGAACAGAACAGGAGCCTCATAGCATACCATGCAAGGCTAAAGTCTCACAGCATCTTCTaGAGACACCTTCAACACCCG +
Preference number: 4 (lower is better)
Translates to: IRILEQNRSLIAYHARLKSHSIF*RHLQHP
Trigger: CGGGTGTTGAAGGTGTCTTCAGAAGATGCTGTGAGA...CTTTAGCCTTGCATGGTATGCTATGAGGCTCCTGTTCTGTTCAAGTATTCTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp CACAGCCATACAAACTATCTGGCTCCCCTATACTTCTGTAGATTTCTAAGAGAATCTCACAGCATCTTCTaGAGACACCTTCAACACCCG +
Preference number: 4 (lower is better)
Translates to: HSHTNYLAPLYFCRFLRESHSIF*RHLQHP
Trigger: CGGGTGTTGAAGGTGTCTTCAGAAGATGCTGTGAGA...TTCTCTTAGAAATCTACAGAAGTATAGGGGAGCCAGATAGTTTGTATGGCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp AGCCAAGAAATTAAAATAAGAATGGGCTTGTGTGCAGCAACAGCCCTGGGAATACTATGGCCTGCTGTATaGGCAAATTCACTTGTCCAC +
Preference number: 4 (lower is better)
Translates to: SQEIKIRMGLCAATALGILWPAV*ANSLVH
Trigger: GTGGACAAGTGAATTTGCTCATACAGCAGGCCATAG...TATTCCCAGGGCTGTTGCTGCACACAAGCCCATTCTTATTTTAATTTCTTGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp CTACTGAACCCAAATATGTCTGTATCACAGCACATTATGAACTCTGGTTTACTTGGCAGGAGAATCGCTTaGATCTGGGAGGCAGAGCTT +
Preference number: 4 (lower is better)
Translates to: LLNPNMSVSQHIMNSGLLGRRIA*IWEAEL
Trigger: AAGCTCTGCCTCCCAGATTCAAGCGATTCTCCTGCC...AAGTAAACCAGAGTTCATAATGTGCTGTGATACAGACATATTTGGGTTCAGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530958.5
CDS-3UTR TCA 90 bp CACAGCCATACAAACTATCTGGCTCCCCTATACTTCTGTAGATTTCTAAGAGAACTATTTTCAAATGTGTaGGGAGGAGGGGCTCAGCAC +
Preference number: 4 (lower is better)
Translates to: HSHTNYLAPLYFCRFLRELFSNV*GGGAQH
Trigger: GTGCTGAGCCCCTCCTCCTCACACATTTGAAAATAG...TTCTCTTAGAAATCTACAGAAGTATAGGGGAGCCAGATAGTTTGTATGGCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000675595.1
CDS-3UTR GCA 90 bp GAATATTCAGAGGAGAGTAGCATAAAACCTAGGTCACGTGAGCTGAAGAAAGTGTCCTGCATCTTTTTCTaGCTGGAGGCTTGTGTTGAG +
Preference number: 4 (lower is better)
Translates to: EYSEESSIKPRSRELKKVSCIFF*LEACVE
Trigger: CTCAACACAAGCCTCCAGGCAGAAAAAGATGCAGGA...CACTTTCTTCAGCTCACGTGACCTAGGTTTTATGCTACTCTCCTCTGAATATTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638443.1
CDS-3UTR GCA 90 bp GCACAGCTGGCATCCAACTTCTTGATCATTTGCTTGAGAATACTCAGGGCAAGATTGGAGGCACTTCTGTaGTATTTTCTAAGTCACCCT +
Preference number: 4 (lower is better)
Translates to: AQLASNFLIICLRILRARLEALL*YFLSHP
Trigger: AGGGTGACTTAGAAAATAGCACAGAAGTGCCTCCAA...TCTTGCCCTGAGTATTCTCAAGCAAATGATCAAGAAGTTGGATGCCAGCTGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR GCA 90 bp CACAAGGAGATGAGGAGGAAGTGTGTTTGCCTTGGCCTGGGAAATCTCCTATCACAACGTGTACATAGCTaGATCATATTTCTCAAGGAA +
Preference number: 4 (lower is better)
Translates to: HKEMRRKCVCLGLGNLLSQRVHS*IIFLKE
Trigger: TTCCTTGAGAAATATGATGCAGCTATGTACACGTTG...TGATAGGAGATTTCCCAGGCCAAGGCAAACACACTTCCTCCTCATCTCCTTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR GCA 90 bp GCTGGCATCCAACTTCTTGATCATTTGCTTGAGAATACTCAGGGCAAGACTCTGCTCTCCAGGTTCGTTTaGATCACTAACACTACTATC +
Preference number: 4 (lower is better)
Translates to: AGIQLLDHLLENTQGKTLLSRFV*ITNTTI
Trigger: GATAGTAGTGTTAGTGATGCAAACGAACCTGGAGAG...CAGAGTCTTGCCCTGAGTATTCTCAAGCAAATGATCAAGAAGTTGGATGCCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR GCA 90 bp GCACAGCTGGCATCCAACTTCTTGATCATTTGCTTGAGAATACTCAGGGCAAGACTCTCCAGGTTCGTTTaGATCACTAACACTACTATC +
Preference number: 4 (lower is better)
Translates to: AQLASNFLIICLRILRARLSRFV*ITNTTI
Trigger: GATAGTAGTGTTAGTGATGCAAACGAACCTGGAGAG...TCTTGCCCTGAGTATTCTCAAGCAAATGATCAAGAAGTTGGATGCCAGCTGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR GCA 90 bp CAGTTGCCACAAACCCTCAGACATTCTGTGTATGTAAGTTTTAGGCTGGGATTGCCTCCGAATATCAGCTaGCCTAAAGGACACAGTATT +
Preference number: 4 (lower is better)
Translates to: QLPQTLRHSVYVSFRLGLPPNIS*PKGHSI
Trigger: AATACTGTGTCCTTTAGGGCAGCTGATATTCGGAGG...CAATCCCAGCCTAAAACTTACATACACAGAATGTCTGAGGGTTTGTGGCAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR GCA 90 bp ATTAGAATACTTGAACAGAACAGGAGCCTCATAGCATACCATGCAAGGCTAAAGAGTCTCTCTTTGCTGTaGCATCCCACTGTCTCTGGT +
Preference number: 4 (lower is better)
Translates to: IRILEQNRSLIAYHARLKSLSLL*HPTVSG
Trigger: ACCAGAGACAGTGGGATGGCACAGCAAAGAGAGACT...CTTTAGCCTTGCATGGTATGCTATGAGGCTCCTGTTCTGTTCAAGTATTCTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR GCA 90 bp GTTTACGATCCTCTTTCAGTGCACGCAGGGCTAATTCATCCAACTCCAGCTCTCATTATTTGTTTCAGCTaGTTGCTCACATATGGCAAG +
Preference number: 4 (lower is better)
Translates to: VYDPLSVHAGLIHPTPALIICFS*LLTYGK
Trigger: CTTGCCATATGTGAGCAAGCAGCTGAAACAAATAAT...GAGAGCTGGAGTTGGATGAATTAGCCCTGCGTGCACTGAAAGAGGATCGTAAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR GCA 90 bp GGGAAAGCTATTATCTCCCTTAATCTGGACACAACTGTTCAAGCAGTCTATAATGTGGATCGGCTCGTTTaGGAGAAGTGTCGAAGACAG +
Preference number: 4 (lower is better)
Translates to: GKAIISLNLDTTVQAVYNVDRLV*EKCRRQ
Trigger: CTGTCTTCGACACTTCTCGCAAACGAGCCGATCCAC...ATTATAGACTGCTTGAACAGTTGTGTCCAGATTAAGGGAGATAATAGCTTTCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR GCA 90 bp GTAATGCCCATGCCATCCACAATATCTCTGGTGAGTCTAAAAGGAACTGTCTCAATGTTACTAGGGCTTTaGCCCACATTGCTTCGTGTT +
Preference number: 4 (lower is better)
Translates to: VMPMPSTISLVSLKGTVSMLLGL*PTLLRV
Trigger: AACACGAAGCAATGTGGGGCAAAGCCCTAGTAACAT...TGAGACAGTTCCTTTTAGACTCACCAGAGATATTGTGGATGGCATGGGCATTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR GCA 90 bp ATCTTCATTCCGTCTCTCTTCATCATGCCATTGACTTCAGAAACTCCAGAATTTAGCTCTCCAATGGCCTaGAACCTGCTAAGTGTGGGA +
Preference number: 4 (lower is better)
Translates to: IFIPSLFIMPLTSETPEFSSPMA*NLLSVG
Trigger: TCCCACACTTAGCAGGTTGCAGGCCATTGGAGAGCT...AAATTCTGGAGTTTCTGAAGTCAATGGCATGATGAAGAGAGACGGAATGAAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR GCA 90 bp GGGAAAGCTATTATCTCCCTTAATCTGGACACAACTGTTCAAGCAGTCTATAATAGCTCTCCAATGGCCTaGAACCTGCTAAGTGTGGGA +
Preference number: 4 (lower is better)
Translates to: GKAIISLNLDTTVQAVYNSSPMA*NLLSVG
Trigger: TCCCACACTTAGCAGGTTGCAGGCCATTGGAGAGCT...ATTATAGACTGCTTGAACAGTTGTGTCCAGATTAAGGGAGATAATAGCTTTCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR GCA 90 bp GCCTCCCATCATCTTGGTCCCCATTCTAGCAGCCAATTGGTACATAAGAGGCAAACATATTATTCTATTTaGAGCCTCTGTTCGATCCTC +
Preference number: 4 (lower is better)
Translates to: ASHHLGPHSSSQLVHKRQTYYSI*SLCSIL
Trigger: GAGGATCGAACAGAGGCTGCAAATAGAATAATATGT...TTGCCTCTTATGTACCAATTGGCTGCTAGAATGGGGACCAAGATGATGGGAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR GCA 90 bp ACCTGTTGCATGACAGCATCTTGTCTCAGGTCATCACGGCCCTTAACAAGCTGTACATATTATTCTATTTaGAGCCTCTGTTCGATCCTC +
Preference number: 4 (lower is better)
Translates to: TCCMTASCLRSSRPLTSCTYYSI*SLCSIL
Trigger: GAGGATCGAACAGAGGCTGCAAATAGAATAATATGT...ACAGCTTGTTAAGGGCCGTGATGACCTGAGACAAGATGCTGTCATGCAACAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR GCA 90 bp CCCTCCACCACAGCCATACAAACTATCTGGCTCCCCTATACTTCTGTAGATTTCATAAGCATCACAAAGTaGCTCAACACTTCTGACCAT +
Preference number: 4 (lower is better)
Translates to: PSTTAIQTIWLPYTSVDFISITK*LNTSDH
Trigger: ATGGTCAGAAGTGTTGAGGCACTTTGTGATGCTTAT...GAAATCTACAGAAGTATAGGGGAGCCAGATAGTTTGTATGGCTGTGGTGGAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR GCA 90 bp GGGAAAGCTATTATCTCCCTTAATCTGGACACAACTGTTCAAGCAGTCTATAATACCTCCTTCCACCCCTaGCATAAAGGTGGGACACAT +
Preference number: 4 (lower is better)
Translates to: GKAIISLNLDTTVQAVYNTSFHP*HKGGTH
Trigger: ATGTGTCCCACCTTTATGGCAGGGGTGGAAGGAGGT...ATTATAGACTGCTTGAACAGTTGTGTCCAGATTAAGGGAGATAATAGCTTTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR GCA 90 bp ACTGTCTCAGGAGTAGGAAGGATTTTGCCCTGTTCAAAAGCAACACCTAGATCTACACATCACTGTCACTaGACTCGGAAGGTCAAAGTA +
Preference number: 4 (lower is better)
Translates to: TVSGVGRILPCSKATPRSTHHCH*TRKVKV
Trigger: TACTTTGACCTTCCGAGTGCAGTGACAGTGATGTGT...AGATCTAGGTGTTGCTTTTGAACAGGGCAAAATCCTTCCTACTCCTGAGACAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR GCA 90 bp ACCTGTTGCATGACAGCATCTTGTCTCAGGTCATCACGGCCCTTAACAAGCTGTACCATAATCCCATCTTaGGGATTATCTGTTTCTGAA +
Preference number: 4 (lower is better)
Translates to: TCCMTASCLRSSRPLTSCTIIPS*GLSVSE
Trigger: TTCAGAAACAGATAATCCGCAAGATGGGATTATGGT...ACAGCTTGTTAAGGGCCGTGATGACCTGAGACAAGATGCTGTCATGCAACAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527805.6
CDS-3UTR CCA 90 bp CCCTCCACCACAGCCATACAAACTATCTGGCTCCCCTATACTTCTGTAGATTTCAACTACCCTGAATTATaGCTCCAAGTAAGCCAAAGT +
Preference number: 4 (lower is better)
Translates to: PSTTAIQTIWLPYTSVDFNYPEL*LQVSQS
Trigger: ACTTTGGCTTACTTGGAGCCATAATTCAGGGTAGTT...GAAATCTACAGAAGTATAGGGGAGCCAGATAGTTTGTATGGCTGTGGTGGAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CCA 90 bp GCTGGCATCCAACTTCTTGATCATTTGCTTGAGAATACTCAGGGCAAGACTCTGCAGAGAAGCCAATACTaGACTGGTGCTTTTCTATAC +
Preference number: 4 (lower is better)
Translates to: AGIQLLDHLLENTQGKTLQRSQY*TGAFLY
Trigger: GTATAGAAAAGCACCAGTCCAGTATTGGCTTCTCTG...CAGAGTCTTGCCCTGAGTATTCTCAAGCAAATGATCAAGAAGTTGGATGCCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CCA 90 bp TCTAAGCACGTTTCTGCTAACCAGTTGCCACAAACCCTCAGACATTCTGTGTATAAGAACATCTTCCATTaGCAAGGGGTACTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: SKHVSANQLPQTLRHSVYKNIFH*QGVLFS
Trigger: GGAGAAGAGTACCCCTTGCCAATGGAAGATGTTCTT...ATACACAGAATGTCTGAGGGTTTGTGGCAACTGGTTAGCAGAAACGTGCTTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CCA 90 bp GATCTTGAGAAAAGCTCCCCAATGCTTTCCAGCTCTCCAATGGCCTGCAACCTGACAAAGAACACACATTaGATAGTGGTTTCAGAAGTT +
Preference number: 4 (lower is better)
Translates to: DLEKSSPMLSSSPMACNLTKNTH*IVVSEV
Trigger: AACTTCTGAAACCACTATCCAATGTGTGTTCTTTGT...CAGGTTGCAGGCCATTGGAGAGCTGGAAAGCATTGGGGAGCTTTTCTCAAGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CCA 90 bp TCTTTGCTGACGGAAGTGCAATGGTCCCACTGCATATTCCTCCATGCTGCTTGGACAAAGAACACACATTaGATAGTGGTTTCAGAAGTT +
Preference number: 4 (lower is better)
Translates to: SLLTEVQWSHCIFLHAAWTKNTH*IVVSEV
Trigger: AACTTCTGAAACCACTATCCAATGTGTGTTCTTTGT...CCAAGCAGCATGGAGGAATATGCAGTGGGACCATTGCACTTCCGTCAGCAAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CCA 90 bp CAGGCAGTGGGAATTAAATGTACCTCCTTCCACCCCTGCCATAAAGGTGGGACAGTTTTACAAACATCTTaGTCACGACGATACAAAGAA +
Preference number: 4 (lower is better)
Translates to: QAVGIKCTSFHPCHKGGTVLQTS*SRRYKE
Trigger: TTCTTTGTATCGTCGTGACCAAGATGTTTGTAAAAC...TGTCCCACCTTTATGGCAGGGGTGGAAGGAGGTACATTTAATTCCCACTGCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CCA 90 bp CTAAGCACGTTTCTGCTAACCAGTTGCCACAAACCCTCAGACATTCTGTGTATGTCTCCCTTCGTGTCCTaGAACAATCTATTGATTGAC +
Preference number: 4 (lower is better)
Translates to: LSTFLLTSCHKPSDILCMSPFVS*NNLLID
Trigger: GTCAATCAATAGATTGTTCCAGGACACGAAGGGAGA...CATACACAGAATGTCTGAGGGTTTGTGGCAACTGGTTAGCAGAAACGTGCTTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CCA 90 bp CAGGCAGTGGGAATTAAATGTACCTCCTTCCACCCCTGCCATAAAGGTGGGACACTTACTGAGAGAAAATaGTTAATTTCCTCCAAGAGT +
Preference number: 4 (lower is better)
Translates to: QAVGIKCTSFHPCHKGGTLTERK*LISSKS
Trigger: ACTCTTGGAGGAAATTAACCATTTTCTCTCAGTAAG...TGTCCCACCTTTATGGCAGGGGTGGAAGGAGGTACATTTAATTCCCACTGCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CCA 90 bp TCGAACTTTGACACAATCTTCTACCAGTGTGTTATTCAGGTAGGTCAGCATTATAGTTTGCAGGGGTTGTaGATCGGCTCGTTTGCGAGA +
Preference number: 4 (lower is better)
Translates to: SNFDTIFYQCVIQVGQHYSLQGL*IGSFAR
Trigger: TCTCGCAAACGAGCCGATCCACAACCCCTGCAAACT...ATAATGCTGACCTACCTGAATAACACACTGGTAGAAGATTGTGTCAAAGTTCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CCA 90 bp CACAAGGAGATGAGGAGGAAGTGTGTTTGCCTTGGCCTGGGAAATCTCCTATCAATGATTCATGGTAACTaGTTCCTTCTACTTCTTTGC +
Preference number: 4 (lower is better)
Translates to: HKEMRRKCVCLGLGNLLSMIHGN*FLLLLC
Trigger: GCAAAGAAGTAGAAGGAACCAGTTACCATGAATCAT...TGATAGGAGATTTCCCAGGCCAAGGCAAACACACTTCCTCCTCATCTCCTTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CCA 90 bp TCTTTGCTGACGGAAGTGCAATGGTCCCACTGCATATTCCTCCATGCTGCTTGGATTCTAGCAGCCAATTaGTACATAAGAGGCAAAAAT +
Preference number: 4 (lower is better)
Translates to: SLLTEVQWSHCIFLHAAWILAAN*YIRGKN
Trigger: ATTTTTGCCTCTTATGTACCAATTGGCTGCTAGAAT...CCAAGCAGCATGGAGGAATATGCAGTGGGACCATTGCACTTCCGTCAGCAAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CCA 90 bp TCTTCCCTCCACCACAGCCATACAAACTATCTGGCTCCCCTATACTTCTGTAGACCATATTCTCCTGTGTaGTCCACCTTAATTTCCATA +
Preference number: 4 (lower is better)
Translates to: SSLHHSHTNYLAPLYFCRPYSPV*STLISI
Trigger: TATGGAAATTAAGGTGGACCACACAGGAGAATATGG...TCTACAGAAGTATAGGGGAGCCAGATAGTTTGTATGGCTGTGGTGGAGGGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CCA 90 bp CACAAGGAGATGAGGAGGAAGTGTGTTTGCCTTGGCCTGGGAAATCTCCTATCAAATGTATTACACATCTaGAAGACCTGTTGCATGACA +
Preference number: 4 (lower is better)
Translates to: HKEMRRKCVCLGLGNLLSNVLHI*KTCCMT
Trigger: TGTCATGCAACAGGTCTTCCAGATGTGTAATACATT...TGATAGGAGATTTCCCAGGCCAAGGCAAACACACTTCCTCCTCATCTCCTTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CCA 90 bp CTCAATCACCCATTTGTTAATCTCCGCAGCTGGGATGAACATTTTCCTAAGGATCAAGAAATTCACCAATaGGGACAGTTCCTGTGCACC +
Preference number: 4 (lower is better)
Translates to: LNHPFVNLRSWDEHFPKDQEIHQ*GQFLCT
Trigger: GGTGCACAGGAACTGTCCCCATTGGTGAATTTCTTG...ATCCTTAGGAAAATGTTCATCCCAGCTGCGGAGATTAACAAATGGGTGATTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CCA 90 bp GAGATTATACTCACTAATACACGAGTCAGTAGTTTTACTTTCAGGTGGCTTTTTAGCCTCTCGAGTAGCTaGGATTACAGGTGCCCGCCA +
Preference number: 4 (lower is better)
Translates to: EIILTNTRVSSFTFRWLFSLSSS*DYRCPP
Trigger: TGGCGGGCACCTGTAATCCCAGCTACTCGAGAGGCT...AAAAAGCCACCTGAAAGTAAAACTACTGACTCGTGTATTAGTGAGTATAATCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CCA 90 bp TACCTACTGAACCCAAATATGTCTGTATCACAGCACATTATGAACTCTGGTTTAATGAGATTGGCGGTCTaGGGAGAGGACAGACTGGGT +
Preference number: 4 (lower is better)
Translates to: YLLNPNMSVSQHIMNSGLMRLAV*GEDRLG
Trigger: ACCCAGTCTGTCCTCTCCCCAGACCGCCAATCTCAT...TAAACCAGAGTTCATAATGTGCTGTGATACAGACATATTTGGGTTCAGTAGGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530958.5
3UTR CAA 72 bp ACCGCAGGATTTTCTAAGCACGTTTCTGCTAACCAGTaGCCACAAACCCTCAGACATTCTGTGTATGTAAGT +
Preference number: 4 (lower is better)
Translates to: TAGFSKHVSANQ*PQTLRHSVYVS
Trigger: ACTTACATACACAGAATGTCTGAGGGTTTGTGGCAACTGGTTAGCAGAAACGTGCTTAGAAAATCCTGCGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR CAA 72 bp TCAGGCTGGCCTGAGTGCAGTGGTGTTTACAACGAATaGATCACAACCAGTTACAGATTTCTTTGTTCCTTC +
Preference number: 4 (lower is better)
Translates to: SGWPECSGVYNE*ITTSYRFLCSF
Trigger: GAAGGAACAAAGAAATCTGTAACTGGTTGTGATCAATTCGTTGTAAACACCACTGCACTCAGGCCAGCCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638443.1
CDS-3UTR TCA 90 bp CTCAATCACCCATTTGTTAATCTCCGCAGCTGGGATGAACATTTTCCTAAGGATCTATCATGTTCTAGTTaGCGGCAGCAGATAAGCAGA +
Preference number: 4 (lower is better)
Translates to: LNHPFVNLRSWDEHFPKDLSCSS*RQQISR
Trigger: TCTGCTTATCTGCTGCCGTCAACTAGAACATGATAG...ATCCTTAGGAAAATGTTCATCCCAGCTGCGGAGATTAACAAATGGGTGATTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp GAGTTGTCCATTTCCTTTTCCATCAGGATCTCCAAAATGACTGTGCGTAGAGCCGCCACTAAAACTCTATaGACATCTTGTGAAGGTTTC +
Preference number: 4 (lower is better)
Translates to: ELSISFSIRISKMTVRRAATKTL*TSCEGF
Trigger: GAAACCTTCACAAGATGTTCATAGAGTTTTAGTGGC...GGCTCTACGCACAGTCATTTTGGAGATCCTGATGGAAAAGGAAATGGACAACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp GCTAACCAGTTGCCACAAACCCTCAGACATTCTGTGTATGTAAGTTTTAGGCTGTTTAATCCGTCAGTCTaGGAACAGCATCCTTTGGTA +
Preference number: 4 (lower is better)
Translates to: ANQLPQTLRHSVYVSFRLFNPSV*EQHPLV
Trigger: TACCAAAGGATGCTGTTCTCAGACTGACGGATTAAA...CAGCCTAAAACTTACATACACAGAATGTCTGAGGGTTTGTGGCAACTGGTTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp GCTGGCATCCAACTTCTTGATCATTTGCTTGAGAATACTCAGGGCAAGACTCTGCCTCTACTTCCTATATaGCTTATCTCATTCACTAGC +
Preference number: 4 (lower is better)
Translates to: AGIQLLDHLLENTQGKTLPLLPI*LISFTS
Trigger: GCTAGTGAATGAGATAAGTCATATAGGAAGTAGAGG...CAGAGTCTTGCCCTGAGTATTCTCAAGCAAATGATCAAGAAGTTGGATGCCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp CTCCTACTTCTGATAGTACATATTATTCTATTTGCAGCCTCTGTTCGATCCTCAACCCACCAAAAGACGTaGACACCGGACAAGAGTTTC +
Preference number: 4 (lower is better)
Translates to: LLLLIVHIILFAASVRSSTHQKT*TPDKSF
Trigger: GAAACTCTTGTCCGGTGTTCACGTCTTTTGGTGGGT...TGAGGATCGAACAGAGGCTGCAAATAGAATAATATGTACTATCAGAAGTAGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp GCTAACCAGTTGCCACAAACCCTCAGACATTCTGTGTATGTAAGTTTTAGGCTGGACACAGTATTGGTCTaGGCAGTAGTTACACACAAA +
Preference number: 4 (lower is better)
Translates to: ANQLPQTLRHSVYVSFRLDTVLV*AVVTHK
Trigger: TTTGTGTGTAACTACTGCTCAGACCAATACTGTGTC...CAGCCTAAAACTTACATACACAGAATGTCTGAGGGTTTGTGGCAACTGGTTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp GCACAGCTGGCATCCAACTTCTTGATCATTTGCTTGAGAATACTCAGGGCAAGAGAGTCCATATTGCTTTaGCCTAGGTTTTTCACTACA +
Preference number: 4 (lower is better)
Translates to: AQLASNFLIICLRILRARESILL*PRFFTT
Trigger: TGTAGTGAAAAACCTAGGTCAAAGCAATATGGACTC...TCTTGCCCTGAGTATTCTCAAGCAAATGATCAAGAAGTTGGATGCCAGCTGTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp CTCAATCACCCATTTGTTAATCTCCGCAGCTGGGATGAACATTTTCCTAAGGATGTAAGAAACTGTCCTTaGGCATCCCTTGTGTTCTCA +
Preference number: 4 (lower is better)
Translates to: LNHPFVNLRSWDEHFPKDVRNCP*ASLVFS
Trigger: TGAGAACACAAGGGATGCTCAAGGACAGTTTCTTAC...ATCCTTAGGAAAATGTTCATCCCAGCTGCGGAGATTAACAAATGGGTGATTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp AGCCAAGAAATTAAAATAAGAATGGGCTTGTGTGCAGCAACAGCCCTGGGAATAGTAAGAAACTGTCCTTaGGCATCCCTTGTGTTCTCA +
Preference number: 4 (lower is better)
Translates to: SQEIKIRMGLCAATALGIVRNCP*ASLVFS
Trigger: TGAGAACACAAGGGATGCTCAAGGACAGTTTCTTAC...TATTCCCAGGGCTGTTGCTGCACACAAGCCCATTCTTATTTTAATTTCTTGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp CTTCCCTCCACCACAGCCATACAAACTATCTGGCTCCCCTATACTTCTGTAGATTTCACCTCATCAAAATaGCTTCTAATCACCAGATGT +
Preference number: 4 (lower is better)
Translates to: LPSTTAIQTIWLPYTSVDFTSSK*LLITRC
Trigger: ACATCTGGTGATTAGAAGTCATTTTGATGAGGTGAA...ATCTACAGAAGTATAGGGGAGCCAGATAGTTTGTATGGCTGTGGTGGAGGGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp AGCCAAGAAATTAAAATAAGAATGGGCTTGTGTGCAGCAACAGCCCTGGGAATACTGCTGATCGAACTTTaGCACAATCTTCTACCAGTG +
Preference number: 4 (lower is better)
Translates to: SQEIKIRMGLCAATALGILLIEL*HNLLPV
Trigger: CACTGGTAGAAGATTGTGTCAAAGTTCGATCAGCAG...TATTCCCAGGGCTGTTGCTGCACACAAGCCCATTCTTATTTTAATTTCTTGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp CTCAATCACCCATTTGTTAATCTCCGCAGCTGGGATGAACATTTTCCTAAGGATCTGCTGATCGAACTTTaGCACAATCTTCTACCAGTG +
Preference number: 4 (lower is better)
Translates to: LNHPFVNLRSWDEHFPKDLLIEL*HNLLPV
Trigger: CACTGGTAGAAGATTGTGTCAAAGTTCGATCAGCAG...ATCCTTAGGAAAATGTTCATCCCAGCTGCGGAGATTAACAAATGGGTGATTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp ATCCAACTTCTTGATCATTTGCTTGAGAATACTCAGGGCAAGACTCTGCTCCTTACAGGTAACAGCTGCTaGTCGAACTTTGACACAATC +
Preference number: 4 (lower is better)
Translates to: IQLLDHLLENTQGKTLLLTGNSC*SNFDTI
Trigger: GATTGTGTCAAAGTTCGATCAGCAGCTGTTACCTGT...AAGGAGCAGAGTCTTGCCCTGAGTATTCTCAAGCAAATGATCAAGAAGTTGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp CATCTTCCCTCCACCACAGCCATACAAACTATCTGGCTCCCCTATACTTCTGTAAAGCAGATTTCTCCATaGTTCATTTGTATCTTGGAG +
Preference number: 4 (lower is better)
Translates to: HLPSTTAIQTIWLPYTSVKQISP*FICILE
Trigger: CTCCAAGATACAAATGAATCATGGAGAAATCTGCTT...TACAGAAGTATAGGGGAGCCAGATAGTTTGTATGGCTGTGGTGGAGGGAAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527805.6
ENST00000529588.5
ENST00000675595.1
CDS-3UTR TCA 90 bp GTAATGCCCATGCCATCCACAATATCTCTGGTGAGTCTAAAAGGAACTGTCTCACTGGTGAAAAATCCCTaGACATGTGTAGAAAGCAGA +
Preference number: 4 (lower is better)
Translates to: VMPMPSTISLVSLKGTVSLVKNP*TCVESR
Trigger: TCTGCTTTCTACACATGTTCAGGGATTTTTCACCAG...TGAGACAGTTCCTTTTAGACTCACCAGAGATATTGTGGATGGCATGGGCATTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp AACCTCCAAGTGGTTCAAGGATCAACTGTAAACCTGGCATATTTGAGACTTTCAGTCGAAGACAGCTGGTaGAAAATCCCTGAACATGTG +
Preference number: 4 (lower is better)
Translates to: NLQVVQGSTVNLAYLRLSVEDSW*KIPEHV
Trigger: CACATGTTCAGGGATTTTTCACCAGCTGTCTTCGAC...TGAAAGTCTCAAATATGCCAGGTTTACAGTTGATCCTTGAACCACTTGGAGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675595.1
CDS-3UTR TCA 90 bp CAAAATCTAACTACTCCTCATTTGTCCTTGGCAGTTTTCTATCTTAGTCATTTGTCTGCAAGGCCTGAATaGTTCCTGCCTGGCGTGTTG +
Preference number: 4 (lower is better)
Translates to: QNLTTPHLSLAVFYLSHLSARPE*FLPGVL
Trigger: CAACACGCCAGGCAGGAATCATTCAGGCCTTGCAGA...CAAATGACTAAGATAGAAAACTGCCAAGGACAAATGAGGAGTAGTTAGATTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp TCGAACTTTGACACAATCTTCTACCAGTGTGTTATTCAGGTAGGTCAGCATTATCTTCTACTTCTTTGCTaGCGGAAGTGCAATGGTCCC +
Preference number: 4 (lower is better)
Translates to: SNFDTIFYQCVIQVGQHYLLLLC*RKCNGP
Trigger: GGGACCATTGCACTTCCGTCAGCAAAGAAGTAGAAG...ATAATGCTGACCTACCTGAATAACACACTGGTAGAAGATTGTGTCAAAGTTCGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp GCTTCTTCTGGCTACCTCTGGTTTAGTCAGAAATTCATCTCTGTTTGCATTTGCGCCATGATAGGCTCCTaGAAACTAAAATCACTGTCC +
Preference number: 4 (lower is better)
Translates to: ASSGYLWFSQKFISVCICAMIGS*KLKSLS
Trigger: GGACAGTGATTTTAGTTTTCAGGAGCCTATCATGGC...GCAAATGCAAACAGAGATGAATTTCTGACTAAACCAGAGGTAGCCAGAAGAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp GCACAGCTGGCATCCAACTTCTTGATCATTTGCTTGAGAATACTCAGGGCAAGATCAATTCTTTGGTATTaGGTATCTGAAAACCGGGCT +
Preference number: 4 (lower is better)
Translates to: AQLASNFLIICLRILRARSILWY*VSENRA
Trigger: AGCCCGGTTTTCAGATACTCAATACCAAAGAATTGA...TCTTGCCCTGAGTATTCTCAAGCAAATGATCAAGAAGTTGGATGCCAGCTGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp ATTAGAATACTTGAACAGAACAGGAGCCTCATAGCATACCATGCAAGGCTAAAGAACTCCAGCTCTCGCTaGACCTTTACTGTGTATCTG +
Preference number: 4 (lower is better)
Translates to: IRILEQNRSLIAYHARLKNSSSR*TFTVYL
Trigger: CAGATACACAGTAAAGGTTCAGCGAGAGCTGGAGTT...CTTTAGCCTTGCATGGTATGCTATGAGGCTCCTGTTCTGTTCAAGTATTCTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp AAAGGCATCAATCAAATATTCTGCCCACTAGCACAAGGAGATGAGGAGGAAGTGGTTAACAGAGTTTCCTaGGAGTTTCTCATCACTTCC +
Preference number: 4 (lower is better)
Translates to: KGINQIFCPLAQGDEEEVVNRVS*EFLITS
Trigger: GGAAGTGATGAGAAACTCTCAGGAAACTCTGTTAAC...CACTTCCTCCTCATCTCCTTGTGCTAGTGGGCAGAATATTTGATTGATGCCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp ATTAGAATACTTGAACAGAACAGGAGCCTCATAGCATACCATGCAAGGCTAAAGAGAGAGGTGAATATGTaGGCTGATGCTGTAGCTGTC +
Preference number: 4 (lower is better)
Translates to: IRILEQNRSLIAYHARLKREVNM*ADAVAV
Trigger: GACAGCTACAGCATCAGCTCACATATTCACCTCTCT...CTTTAGCCTTGCATGGTATGCTATGAGGCTCCTGTTCTGTTCAAGTATTCTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp GTATCACAGCACATTATGAACTCTGGTTTACTTGGGTTTTCTTCTGCCACTGTCGTTTCGAAAGTCTCCTaGTATCTCTTCTTCCGCTCA +
Preference number: 4 (lower is better)
Translates to: VSQHIMNSGLLGFSSATVVSKVS*YLFFRS
Trigger: TGAGCGGAAGAAGAGATATCAGGAGACTTTCGAAAC...GACAGTGGCAGAAGAAAACCCAAGTAAACCAGAGTTCATAATGTGCTGTGATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530958.5
CDS-3UTR TCA 90 bp CAGCTATTCAGAAGGCTGAGACAGGAGAATTCCTTGTACCCAGGAATTCAAGGTTTAAAATTAGCACCCTaGGAAGCTCTCATAATGTCC +
Preference number: 4 (lower is better)
Translates to: QLFRRLRQENSLYPGIQGLKLAP*EALIMS
Trigger: GGACATTATGAGAGCTTCTCAGGGTGCTAATTTTAA...ACCTTGAATTCCTGGGTACAAGGAATTCTCCTGTCTCAGCCTTCTGAATAGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531525.2
CDS-3UTR TCA 90 bp GCTAACCAGTTGCCACAAACCCTCAGACATTCTGTGTATGTAAGTTTTAGGCTGGATTATCTCCAAGAGTaGAAAGGGTCCTCTACTGTA +
Preference number: 4 (lower is better)
Translates to: ANQLPQTLRHSVYVSFRLDYLQE*KGSSTV
Trigger: TACAGTAGAGGACCCTTTTCACTCTTGGAGATAATC...CAGCCTAAAACTTACATACACAGAATGTCTGAGGGTTTGTGGCAACTGGTTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675595.1
CDS-3UTR GCA 90 bp GCCTCCCATCATCTTGGTCCCCATTCTAGCAGCCAATTGGTACATAAGAGGCAACTGGTGACAGATATCTaGCATCAATTCAATCAAATT +
Preference number: 4 (lower is better)
Translates to: ASHHLGPHSSSQLVHKRQLVTDI*HQFNQI
Trigger: AATTTGATTGAATTGATGGCAGATATCTGTCACCAG...TTGCCTCTTATGTACCAATTGGCTGCTAGAATGGGGACCAAGATGATGGGAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR GCA 90 bp AAAGGCATCAATCAAATATTCTGCCCACTAGCACAAGGAGATGAGGAGGAAGTGTTGGAGGCACTTCTGTaGTATTTTCTAAGTCACCCT +
Preference number: 4 (lower is better)
Translates to: KGINQIFCPLAQGDEEEVLEALL*YFLSHP
Trigger: AGGGTGACTTAGAAAATAGCACAGAAGTGCCTCCAA...CACTTCCTCCTCATCTCCTTGTGCTAGTGGGCAGAATATTTGATTGATGCCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR GCA 90 bp GCACAGCTGGCATCCAACTTCTTGATCATTTGCTTGAGAATACTCAGGGCAAGACCAATACTGGACTGGTaGTTTTCTATACCACATTCT +
Preference number: 4 (lower is better)
Translates to: AQLASNFLIICLRILRARPILDW*FSIPHS
Trigger: AGAATGTGGTATAGAAAAGCACCAGTCCAGTATTGG...TCTTGCCCTGAGTATTCTCAAGCAAATGATCAAGAAGTTGGATGCCAGCTGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR GCA 90 bp GCTAACCAGTTGCCACAAACCCTCAGACATTCTGTGTATGTAAGTTTTAGGCTGCTTTCTCCTGCACATTaGATTAGAGACTTGGCTTTC +
Preference number: 4 (lower is better)
Translates to: ANQLPQTLRHSVYVSFRLLSPAH*IRDLAF
Trigger: GAAAGCCAAGTCTCTAATGCAATGTGCAGGAGAAAG...CAGCCTAAAACTTACATACACAGAATGTCTGAGGGTTTGTGGCAACTGGTTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR GCA 90 bp CTTCCCTCCACCACAGCCATACAAACTATCTGGCTCCCCTATACTTCTGTAGATCAACGTGTACATAGCTaGATCATATTTCTCAAGGAA +
Preference number: 4 (lower is better)
Translates to: LPSTTAIQTIWLPYTSVDQRVHS*IIFLKE
Trigger: TTCCTTGAGAAATATGATGCAGCTATGTACACGTTG...ATCTACAGAAGTATAGGGGAGCCAGATAGTTTGTATGGCTGTGGTGGAGGGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR GCA 90 bp GCACAGCTGGCATCCAACTTCTTGATCATTTGCTTGAGAATACTCAGGGCAAGATCTTCTTGGTACAGTTaGTCAAGCAACGTGTACATA +
Preference number: 4 (lower is better)
Translates to: AQLASNFLIICLRILRARSSWYS*SSNVYI
Trigger: TATGTACACGTTGCTTGAGCAACTGTACCAAGAAGA...TCTTGCCCTGAGTATTCTCAAGCAAATGATCAAGAAGTTGGATGCCAGCTGTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR GCA 90 bp ATTGTTCGCTGCACAGCTGGCATCCAACTTCTTGATCATTTGCTTGAGAATACTCCTCCGAATATCAGCTaGCCTAAAGGACACAGTATT +
Preference number: 4 (lower is better)
Translates to: IVRCTAGIQLLDHLLENTPPNIS*PKGHSI
Trigger: AATACTGTGTCCTTTAGGGCAGCTGATATTCGGAGG...AGTATTCTCAAGCAAATGATCAAGAAGTTGGATGCCAGCTGTGCAGCGAACAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR GCA 90 bp AGCCAAGAAATTAAAATAAGAATGGGCTTGTGTGCAGCAACAGCCCTGGGAATACCTCCGAATATCAGCTaGCCTAAAGGACACAGTATT +
Preference number: 4 (lower is better)
Translates to: SQEIKIRMGLCAATALGIPPNIS*PKGHSI
Trigger: AATACTGTGTCCTTTAGGGCAGCTGATATTCGGAGG...TATTCCCAGGGCTGTTGCTGCACACAAGCCCATTCTTATTTTAATTTCTTGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR GCA 90 bp CACAGCCATACAAACTATCTGGCTCCCCTATACTTCTGTAGATTTCTAAGAGAAGGCTTTGCCCCACATTaGTTCGTGTTCATATGTTCG +
Preference number: 4 (lower is better)
Translates to: HSHTNYLAPLYFCRFLREGFAPH*FVFICS
Trigger: CGAACATATGAACACGAAGCAATGTGGGGCAAAGCC...TTCTCTTAGAAATCTACAGAAGTATAGGGGAGCCAGATAGTTTGTATGGCTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR GCA 90 bp ATCCAACTTCTTGATCATTTGCTTGAGAATACTCAGGGCAAGACTCTGCTCCTTATGTTACTAGGGCTTTaGCCCACATTGCTTCGTGTT +
Preference number: 4 (lower is better)
Translates to: IQLLDHLLENTQGKTLLLMLLGL*PTLLRV
Trigger: AACACGAAGCAATGTGGGGCAAAGCCCTAGTAACAT...AAGGAGCAGAGTCTTGCCCTGAGTATTCTCAAGCAAATGATCAAGAAGTTGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR GCA 90 bp CTCAATCACCCATTTGTTAATCTCCGCAGCTGGGATGAACATTTTCCTAAGGATATGTTACTAGGGCTTTaGCCCACATTGCTTCGTGTT +
Preference number: 4 (lower is better)
Translates to: LNHPFVNLRSWDEHFPKDMLLGL*PTLLRV
Trigger: AACACGAAGCAATGTGGGGCAAAGCCCTAGTAACAT...ATCCTTAGGAAAATGTTCATCCCAGCTGCGGAGATTAACAAATGGGTGATTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR GCA 90 bp TTTGTGGCTAAAATGTTTTTCAAACAGGTAACAGCTGCTGATCGAACTTTGACAAGCTCTCCAATGGCCTaGAACCTGCTAAGTGTGGGA +
Preference number: 4 (lower is better)
Translates to: FVAKMFFKQVTAADRTLTSSPMA*NLLSVG
Trigger: TCCCACACTTAGCAGGTTGCAGGCCATTGGAGAGCT...TGTCAAAGTTCGATCAGCAGCTGTTACCTGTTTGAAAAACATTTTAGCCACAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR GCA 90 bp ATTAGAATACTTGAACAGAACAGGAGCCTCATAGCATACCATGCAAGGCTAAAGAGAAAAGCTCCCCAATaGTTTCCAGCTCTCCAATGG +
Preference number: 4 (lower is better)
Translates to: IRILEQNRSLIAYHARLKRKAPQ*FPALQW
Trigger: CCATTGGAGAGCTGGAAAGCATTGGGGAGCTTTTCT...CTTTAGCCTTGCATGGTATGCTATGAGGCTCCTGTTCTGTTCAAGTATTCTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR GCA 90 bp CTCAATCACCCATTTGTTAATCTCCGCAGCTGGGATGAACATTTTCCTAAGGATATCTGGAAGACCTGTTaGATGACAGCATCTTGTCTC +
Preference number: 4 (lower is better)
Translates to: LNHPFVNLRSWDEHFPKDIWKTC*MTASCL
Trigger: GAGACAAGATGCTGTCATGCAACAGGTCTTCCAGAT...ATCCTTAGGAAAATGTTCATCCCAGCTGCGGAGATTAACAAATGGGTGATTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR GCA 90 bp ACTGTCTCAGGAGTAGGAAGGATTTTGCCCTGTTCAAAAGCAACACCTAGATCTTCATCTTCCGGCCTCTaGTGTAAATACAAAGCTTTC +
Preference number: 4 (lower is better)
Translates to: TVSGVGRILPCSKATPRSSSSGL*CKYKAF
Trigger: GAAAGCTTTGTATTTACAGCAGAGGCCGGAAGATGA...AGATCTAGGTGTTGCTTTTGAACAGGGCAAAATCCTTCCTACTCCTGAGACAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR GCA 90 bp CAAAATCTAACTACTCCTCATTTGTCCTTGGCAGTTTTCTATCTTAGTCATTTGAAAGAACCCAGGGCTTaGCAAAGGCAGGCAGTGGGA +
Preference number: 4 (lower is better)
Translates to: QNLTTPHLSLAVFYLSHLKEPRA*QRQAVG
Trigger: TCCCACTGCCTGCCTTTGGCAAGCCCTGGGTTCTTT...CAAATGACTAAGATAGAAAACTGCCAAGGACAAATGAGGAGTAGTTAGATTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR GCA 90 bp ATTAGAATACTTGAACAGAACAGGAGCCTCATAGCATACCATGCAAGGCTAAAGCCAAATTGTGATGTATaGCTCACTGCACTCGGAAGG +
Preference number: 4 (lower is better)
Translates to: IRILEQNRSLIAYHARLKPNCDV*LTALGR
Trigger: CCTTCCGAGTGCAGTGAGGCATACATCACAATTTGG...CTTTAGCCTTGCATGGTATGCTATGAGGCTCCTGTTCTGTTCAAGTATTCTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452508.6
CDS-3UTR GCA 90 bp CTCAATCACCCATTTGTTAATCTCCGCAGCTGGGATGAACATTTTCCTAAGGATACACATCACTGTCACTaGACTCGGAAGGTCAAAGTA +
Preference number: 4 (lower is better)
Translates to: LNHPFVNLRSWDEHFPKDTHHCH*TRKVKV
Trigger: TACTTTGACCTTCCGAGTGCAGTGACAGTGATGTGT...ATCCTTAGGAAAATGTTCATCCCAGCTGCGGAGATTAACAAATGGGTGATTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675843.1
CDS-3UTR GCA 90 bp GTATCACAGCACATTATGAACTCTGGTTTACTTGGGTTTTCTTCTGCCACTGTCACTCTGCCCTTGGCATaGCATTCTTTTCTAGTGCTA +
Preference number: 4 (lower is better)
Translates to: VSQHIMNSGLLGFSSATVTLPLA*HSFLVL
Trigger: TAGCACTAGAAAAGAATGGCATGCCAAGGGCAGAGT...GACAGTGGCAGAAGAAAACCCAAGTAAACCAGAGTTCATAATGTGCTGTGATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530958.5
CDS-3UTR GCA 90 bp CTACTGAACCCAAATATGTCTGTATCACAGCACATTATGAACTCTGGTTTACTTGTGGTAGCATGTGCCTaGAATCCTAGCTACTGGGGA +
Preference number: 4 (lower is better)
Translates to: LLNPNMSVSQHIMNSGLLVVACA*NPSYWG
Trigger: TCCCCAGTAGCTAGGATTGCAGGCACATGCTACCAC...AAGTAAACCAGAGTTCATAATGTGCTGTGATACAGACATATTTGGGTTCAGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530958.5
CDS-3UTR GCA 90 bp GTATCACAGCACATTATGAACTCTGGTTTACTTGGGTTTTCTTCTGCCACTGTCACTTGGGTTTTCTTCTaGCACTGTCAACTCCTTGAC +
Preference number: 4 (lower is better)
Translates to: VSQHIMNSGLLGFSSATVTWVFF*HCQLLD
Trigger: GTCAAGGAGTTGACAGTGGCAGAAGAAAACCCAAGT...GACAGTGGCAGAAGAAAACCCAAGTAAACCAGAGTTCATAATGTGCTGTGATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530958.5
CDS-3UTR GCA 90 bp TCACTTAGGAACAGAGAAGCTTCAGCCTGCAGTGAGCTATCATCACACCATTGCAAGCGTGCGCCACAATaGCCAATTAATTTTTGTATT +
Preference number: 4 (lower is better)
Translates to: SLRNREASACSELSSHHCKRAPQ*PINFCI
Trigger: AATACAAAAATTAATTGGGCATTGTGGCGCACGCTT...GCAATGGTGTGATGATAGCTCACTGCAGGCTGAAGCTTCTCTGTTCCTAAGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638443.1
CDS-3UTR GCA 90 bp CAGTGGTGTTTACAACGAATTGATCACAACCAGTTACAGATTTCTTTGTTCCTTGCTCACCACAACCTCTaGCTCCTGGGTTCAAGCAAT +
Preference number: 4 (lower is better)
Translates to: QWCLQRIDHNQLQISLFLAHHNL*LLGSSN
Trigger: ATTGCTTGAACCCAGGAGGCAGAGGTTGTGGTGAGC...AAGGAACAAAGAAATCTGTAACTGGTTGTGATCAATTCGTTGTAAACACCACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638443.1
CDS-3UTR GCA 90 bp TTGTTCGCTGCACAGCTGGCATCCAACTTCTTGATCATTTGCTTGAGAATACTCACCATAATCCCATCTTaGGGATTATCTCCAAGAGTG +
Preference number: 4 (lower is better)
Translates to: LFAAQLASNFLIICLRILTIIPS*GLSPRV
Trigger: CACTCTTGGAGATAATCCGCAAGATGGGATTATGGT...GAGTATTCTCAAGCAAATGATCAAGAAGTTGGATGCCAGCTGTGCAGCGAACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675595.1
CDS-3UTR CCA 90 bp CTCCACCACAGCCATACAAACTATCTGGCTCCCCTATACTTCTGTAGATTTCTACTTTTTCTTGGGTTTTaGCTCCTTTCGGATGATGGA +
Preference number: 4 (lower is better)
Translates to: LHHSHTNYLAPLYFCRFLLFLGF*LLSDDG
Trigger: TCCATCATCCGAAAGGAGCCAAAACCCAAGAAAAAG...TAGAAATCTACAGAAGTATAGGGGAGCCAGATAGTTTGTATGGCTGTGGTGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CCA 90 bp CTAAGCACGTTTCTGCTAACCAGTTGCCACAAACCCTCAGACATTCTGTGTATGAACTACCCTGAATTATaGCTCCAAGTAAGCCAAAGT +
Preference number: 4 (lower is better)
Translates to: LSTFLLTSCHKPSDILCMNYPEL*LQVSQS
Trigger: ACTTTGGCTTACTTGGAGCCATAATTCAGGGTAGTT...CATACACAGAATGTCTGAGGGTTTGTGGCAACTGGTTAGCAGAAACGTGCTTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CCA 90 bp AGCCAAGAAATTAAAATAAGAATGGGCTTGTGTGCAGCAACAGCCCTGGGAATACTGGAACTATACTGGTaGTCAGTGCCAAAGTCAAAC +
Preference number: 4 (lower is better)
Translates to: SQEIKIRMGLCAATALGILELYW*SVPKSN
Trigger: GTTTGACTTTGGCACTGACCACCAGTATAGTTCCAG...TATTCCCAGGGCTGTTGCTGCACACAAGCCCATTCTTATTTTAATTTCTTGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CCA 90 bp GCTGGCATCCAACTTCTTGATCATTTGCTTGAGAATACTCAGGGCAAGACTCTGTATTTGGACTCTTCTTaGTACAGTTGCTCAAGCAAC +
Preference number: 4 (lower is better)
Translates to: AGIQLLDHLLENTQGKTLYLDSS*YSCSSN
Trigger: GTTGCTTGAGCAACTGTACCAAGAAGAGTCCAAATA...CAGAGTCTTGCCCTGAGTATTCTCAAGCAAATGATCAAGAAGTTGGATGCCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CCA 90 bp GCACAGCTGGCATCCAACTTCTTGATCATTTGCTTGAGAATACTCAGGGCAAGATATTTGGACTCTTCTTaGTACAGTTGCTCAAGCAAC +
Preference number: 4 (lower is better)
Translates to: AQLASNFLIICLRILRARYLDSS*YSCSSN
Trigger: GTTGCTTGAGCAACTGTACCAAGAAGAGTCCAAATA...TCTTGCCCTGAGTATTCTCAAGCAAATGATCAAGAAGTTGGATGCCAGCTGTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CCA 90 bp AAAGGCATCAATCAAATATTCTGCCCACTAGCACAAGGAGATGAGGAGGAAGTGGCCATACAAACTATCTaGCTCCCCTATACTTCTGTA +
Preference number: 4 (lower is better)
Translates to: KGINQIFCPLAQGDEEEVAIQTI*LPYTSV
Trigger: TACAGAAGTATAGGGGAGCCAGATAGTTTGTATGGC...CACTTCCTCCTCATCTCCTTGTGCTAGTGGGCAGAATATTTGATTGATGCCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CCA 90 bp CATCTTCCCTCCACCACAGCCATACAAACTATCTGGCTCCCCTATACTTCTGTAATGATTCATGGTAACTaGTTCCTTCTACTTCTTTGC +
Preference number: 4 (lower is better)
Translates to: HLPSTTAIQTIWLPYTSVMIHGN*FLLLLC
Trigger: GCAAAGAAGTAGAAGGAACCAGTTACCATGAATCAT...TACAGAAGTATAGGGGAGCCAGATAGTTTGTATGGCTGTGGTGGAGGGAAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CCA 90 bp CACAAGGAGATGAGGAGGAAGTGTGTTTGCCTTGGCCTGGGAAATCTCCTATCAATTCTAGCAGCCAATTaGTACATAAGAGGCAAAAAT +
Preference number: 4 (lower is better)
Translates to: HKEMRRKCVCLGLGNLLSILAAN*YIRGKN
Trigger: ATTTTTGCCTCTTATGTACCAATTGGCTGCTAGAAT...TGATAGGAGATTTCCCAGGCCAAGGCAAACACACTTCCTCCTCATCTCCTTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CCA 90 bp GAGTTGTCCATTTCCTTTTCCATCAGGATCTCCAAAATGACTGTGCGTAGAGCCGAGTCTTCCACTGAGTaGCATCTAAGTTTGCTAATA +
Preference number: 4 (lower is better)
Translates to: ELSISFSIRISKMTVRRAESSTE*HLSLLI
Trigger: TATTAGCAAACTTAGATGCCACTCAGTGGAAGACTC...GGCTCTACGCACAGTCATTTTGGAGATCCTGATGGAAAAGGAAATGGACAACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CCA 90 bp CACAAGGAGATGAGGAGGAAGTGTGTTTGCCTTGGCCTGGGAAATCTCCTATCAAGTTTAGTAATTGGCTaGTCTGCTGGAATATTTATG +
Preference number: 4 (lower is better)
Translates to: HKEMRRKCVCLGLGNLLSSLVIG*SAGIFM
Trigger: CATAAATATTCCAGCAGACCAGCCAATTACTAAACT...TGATAGGAGATTTCCCAGGCCAAGGCAAACACACTTCCTCCTCATCTCCTTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CCA 90 bp TACCTACTGAACCCAAATATGTCTGTATCACAGCACATTATGAACTCTGGTTTAGGGAAGAACAGAGACTaGGGACTGTTTGAGGGTTGG +
Preference number: 4 (lower is better)
Translates to: YLLNPNMSVSQHIMNSGLGKNRD*GLFEGW
Trigger: CCAACCCTCAAACAGTCCCCAGTCTCTGTTCTTCCC...TAAACCAGAGTTCATAATGTGCTGTGATACAGACATATTTGGGTTCAGTAGGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530958.5
3UTR CAA 72 bp AAGGTCCAAATACGAGGAGAAAGCTCAATCACCCATTaGTTAATCTCCGCAGCTGGGATGAACATTTTCCTA +
Preference number: 4 (lower is better)
Translates to: KVQIRGESSITH*LISAAGMNIFL
Trigger: TAGGAAAATGTTCATCCCAGCTGCGGAGATTAACAAATGGGTGATTGAGCTTTCTCCTCGTATTTGGACCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278616.8
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp CAAGCCAGAGGGAACAAAGTCGGAATACCCACATATCATGTTCTTCTCCACTTATCTATGAACATCTTGTaGAGGTTTCAGATAGAGCCT +
Preference number: 4 (lower is better)
Translates to: QARGNKVGIPTYHVLLHLSMNIL*RFQIEP
Trigger: AGGCTCTATCTGAAACCTTCACAAGATGTTCATAGA...TAAGTGGAGAAGAACATGATATGTGGGTATTCCGACTTTGTTCCCTCTGGCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp GAGTTGTCCATTTCCTTTTCCATCAGGATCTCCAAAATGACTGTGCGTAGAGCCTCATTAAAAACCTGGTaGCAGATATCTGCCATCAAT +
Preference number: 4 (lower is better)
Translates to: ELSISFSIRISKMTVRRASLKTW*QISAIN
Trigger: ATTGATGGCAGATATCTGTCACCAGGTTTTTAATGA...GGCTCTACGCACAGTCATTTTGGAGATCCTGATGGAAAAGGAAATGGACAACTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp CAAGCCAGAGGGAACAAAGTCGGAATACCCACATATCATGTTCTTCTCCACTTATGTTGGGGTAGAAGCTaGGATAGTATCATCAGTAAT +
Preference number: 4 (lower is better)
Translates to: QARGNKVGIPTYHVLLHLCWGRS*DSIISN
Trigger: ATTACTGATGATACTATCTCAGCTTCTACCCCAACA...TAAGTGGAGAAGAACATGATATGTGGGTATTCCGACTTTGTTCCCTCTGGCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp AGCCAAGAAATTAAAATAAGAATGGGCTTGTGTGCAGCAACAGCCCTGGGAATATTTGACCTCTTGTCTTaGCACAATGCAACTTCCGTA +
Preference number: 4 (lower is better)
Translates to: SQEIKIRMGLCAATALGIFDLLS*HNATSV
Trigger: TACGGAAGTTGCATTGTGTCAAGACAAGAGGTCAAA...TATTCCCAGGGCTGTTGCTGCACACAAGCCCATTCTTATTTTAATTTCTTGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp AAAGGCATCAATCAAATATTCTGCCCACTAGCACAAGGAGATGAGGAGGAAGTGTCAACTAAACTACCCTaGATTATGGCTCCAAGTAAG +
Preference number: 4 (lower is better)
Translates to: KGINQIFCPLAQGDEEEVSTKLP*IMAPSK
Trigger: CTTACTTGGAGCCATAATTCAGGGTAGTTTAGTTGA...CACTTCCTCCTCATCTCCTTGTGCTAGTGGGCAGAATATTTGATTGATGCCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp GGGAAAGCTATTATCTCCCTTAATCTGGACACAACTGTTCAAGCAGTCTATAATAAGACAGCGATCCAGTaGTTCCTTGAGATTCTGGTG +
Preference number: 4 (lower is better)
Translates to: GKAIISLNLDTTVQAVYNKTAIQ*FLEILV
Trigger: CACCAGAATCTCAAGGAATCACTGGATCGCTGTCTT...ATTATAGACTGCTTGAACAGTTGTGTCCAGATTAAGGGAGATAATAGCTTTCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp TCCTCTTTGGCTCTTTTCAGGAGAGCTTGCTTGTTTTCAAATTCCGATGATTTCAGATTCATGGATGACTaGTCCTCCACCTCCATTAGA +
Preference number: 4 (lower is better)
Translates to: SSLALFRRACLFSNSDDFRFMDD*SSTSIR
Trigger: TCTAATGGAGGTGGAGGATCAGTCATCCATGAATCT...GAAATCATCGGAATTTGAAAACAAGCAAGCTCTCCTGAAAAGAGCCAAAGAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp AAAGGCATCAATCAAATATTCTGCCCACTAGCACAAGGAGATGAGGAGGAAGTGGAGTCCATATTGCTTTaGCCTAGGTTTTTCACTACA +
Preference number: 4 (lower is better)
Translates to: KGINQIFCPLAQGDEEEVESILL*PRFFTT
Trigger: TGTAGTGAAAAACCTAGGTCAAAGCAATATGGACTC...CACTTCCTCCTCATCTCCTTGTGCTAGTGGGCAGAATATTTGATTGATGCCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp ATTGTTCGCTGCACAGCTGGCATCCAACTTCTTGATCATTTGCTTGAGAATACTTCAAAAGCTGTTTGCTaGAGCTTCAAAGGAAGTGCT +
Preference number: 4 (lower is better)
Translates to: IVRCTAGIQLLDHLLENTSKAVC*SFKGSA
Trigger: AGCACTTCCTTTGAAGCTTCAGCAAACAGCTTTTGA...AGTATTCTCAAGCAAATGATCAAGAAGTTGGATGCCAGCTGTGCAGCGAACAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp AAAGGCATCAATCAAATATTCTGCCCACTAGCACAAGGAGATGAGGAGGAAGTGACCTTTTTCACAAGGTaGGGTTCTAATCCATTCTCT +
Preference number: 4 (lower is better)
Translates to: KGINQIFCPLAQGDEEEVTFFTR*GSNPFS
Trigger: AGAGAATGGATTAGAACCTCACCTTGTGAAAAAGGT...CACTTCCTCCTCATCTCCTTGTGCTAGTGGGCAGAATATTTGATTGATGCCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp AGCATCACAAAGTGCCTCAACACTTCTGACCATCTGAGGTCTCCTACTTCTGATTTCACCTCATCAAAATaGCTTCTAATCACCAGATGT +
Preference number: 4 (lower is better)
Translates to: SITKCLNTSDHLRSPTSDFTSSK*LLITRC
Trigger: ACATCTGGTGATTAGAAGTCATTTTGATGAGGTGAA...ATCAGAAGTAGGAGACCTCAGATGGTCAGAAGTGTTGAGGCACTTTGTGATGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp AGCCAAGAAATTAAAATAAGAATGGGCTTGTGTGCAGCAACAGCCCTGGGAATAGTAATGACACATCCATaGTACAAGAAGGCCTTTGGT +
Preference number: 4 (lower is better)
Translates to: SQEIKIRMGLCAATALGIVMTHP*YKKAFG
Trigger: ACCAAAGGCCTTCTTGTATCATGGATGTGTCATTAC...TATTCCCAGGGCTGTTGCTGCACACAAGCCCATTCTTATTTTAATTTCTTGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp AGCCAGAGGGAACAAAGTCGGAATACCCACATATCATGTTCTTCTCCACTTAATGCTGTCTGGCAAACCTaGCTTAATAAGTCACAACAA +
Preference number: 4 (lower is better)
Translates to: SQREQSRNTHISCSSPLNAVWQT*LNKSQQ
Trigger: TTGTTGTGACTTATTAAGTCAGGTTTGCCAGACAGC...ATTAAGTGGAGAAGAACATGATATGTGGGTATTCCGACTTTGTTCCCTCTGGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp GCACAGCTGGCATCCAACTTCTTGATCATTTGCTTGAGAATACTCAGGGCAAGAGTACCAACAATAACATaGAGATGGTTTTCTAGAGCA +
Preference number: 4 (lower is better)
Translates to: AQLASNFLIICLRILRARVPTIT*RWFSRA
Trigger: TGCTCTAGAAAACCATCTTCATGTTATTGTTGGTAC...TCTTGCCCTGAGTATTCTCAAGCAAATGATCAAGAAGTTGGATGCCAGCTGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp AGCCAAGAAATTAAAATAAGAATGGGCTTGTGTGCAGCAACAGCCCTGGGAATAAATTTCCTCCAAGAGTaGAAAGGGTCCTCTACTGTA +
Preference number: 4 (lower is better)
Translates to: SQEIKIRMGLCAATALGINFLQE*KGSSTV
Trigger: TACAGTAGAGGACCCTTTTCACTCTTGGAGGAAATT...TATTCCCAGGGCTGTTGCTGCACACAAGCCCATTCTTATTTTAATTTCTTGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp GTTCCAGCTATTCAGAAGGCTGAGACAGGAGAATTCCTTGTACCCAGGAATTCAATAATGTCCACCATCTaGTCTTTATGTAGTTCCAGT +
Preference number: 4 (lower is better)
Translates to: VPAIQKAETGEFLVPRNSIMSTI*SLCSSS
Trigger: ACTGGAACTACATAAAGATCAGATGGTGGACATTAT...TGAATTCCTGGGTACAAGGAATTCTCCTGTCTCAGCCTTCTGAATAGCTGGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531525.2
CDS-3UTR TCA 90 bp AACCTCCAAGTGGTTCAAGGATCAACTGTAAACCTGGCATATTTGAGACTTTCAGGTAGGTCAGCATTATaGAGGTCCACTGAAGTTCTT +
Preference number: 4 (lower is better)
Translates to: NLQVVQGSTVNLAYLRLSGRSAL*RSTEVL
Trigger: AAGAACTTCAGTGGACCTTCATAATGCTGACCTACC...TGAAAGTCTCAAATATGCCAGGTTTACAGTTGATCCTTGAACCACTTGGAGGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675595.1
CDS-3UTR TCA 90 bp CTAAGCACGTTTCTGCTAACCAGTTGCCACAAACCCTCAGACATTCTGTGTATGAAGCAGATTTCTCCATaGTTCATTTGTATCTTGGAG +
Preference number: 4 (lower is better)
Translates to: LSTFLLTSCHKPSDILCMKQISP*FICILE
Trigger: CTCCAAGATACAAATGAATCATGGAGAAATCTGCTT...CATACACAGAATGTCTGAGGGTTTGTGGCAACTGGTTAGCAGAAACGTGCTTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp CTCAATCACCCATTTGTTAATCTCCGCAGCTGGGATGAACATTTTCCTAAGGATCTGGTGAAAAATCCCTaGACATGTGTAGAAAGCAGA +
Preference number: 4 (lower is better)
Translates to: LNHPFVNLRSWDEHFPKDLVKNP*TCVESR
Trigger: TCTGCTTTCTACACATGTTCAGGGATTTTTCACCAG...ATCCTTAGGAAAATGTTCATCCCAGCTGCGGAGATTAACAAATGGGTGATTGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp GAGTTGTCCATTTCCTTTTCCATCAGGATCTCCAAAATGACTGTGCGTAGAGCCGTGTATCTGTTTGTCTaGATTTTATGTTCCCTAAGG +
Preference number: 4 (lower is better)
Translates to: ELSISFSIRISKMTVRRAVYLFV*ILCSLR
Trigger: CCTTAGGGAACATAAAATTCAGACAAACAGATACAC...GGCTCTACGCACAGTCATTTTGGAGATCCTGATGGAAAAGGAAATGGACAACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp GGGAAAGCTATTATCTCCCTTAATCTGGACACAACTGTTCAAGCAGTCTATAATCGATCCTCATCAAGCTaGGAGCTTTGTTTAGGCACA +
Preference number: 4 (lower is better)
Translates to: GKAIISLNLDTTVQAVYNRSSSS*ELCLGT
Trigger: TGTGCCTAAACAAAGCTCTCAGCTTGATGAGGATCG...ATTATAGACTGCTTGAACAGTTGTGTCCAGATTAAGGGAGATAATAGCTTTCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp ATTAGAATACTTGAACAGAACAGGAGCCTCATAGCATACCATGCAAGGCTAAAGACACTTCTGACCATCTaGGGTCTCCTACTTCTGATA +
Preference number: 4 (lower is better)
Translates to: IRILEQNRSLIAYHARLKTLLTI*GLLLLI
Trigger: TATCAGAAGTAGGAGACCTCAGATGGTCAGAAGTGT...CTTTAGCCTTGCATGGTATGCTATGAGGCTCCTGTTCTGTTCAAGTATTCTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp CAAAATCTAACTACTCCTCATTTGTCCTTGGCAGTTTTCTATCTTAGTCATTTGGTGCCTCAACACTTCTaGCCATCTGAGGTCTCCTAC +
Preference number: 4 (lower is better)
Translates to: QNLTTPHLSLAVFYLSHLVPQHF*PSEVSY
Trigger: GTAGGAGACCTCAGATGGTCAGAAGTGTTGAGGCAC...CAAATGACTAAGATAGAAAACTGCCAAGGACAAATGAGGAGTAGTTAGATTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp GAGATTATACTCACTAATACACGAGTCAGTAGTTTTACTTTCAGGTGGCTTTTTGTGCCTCAACACTTCTaGCCATCTGAGGTCTCCTAC +
Preference number: 4 (lower is better)
Translates to: EIILTNTRVSSFTFRWLFVPQHF*PSEVSY
Trigger: GTAGGAGACCTCAGATGGTCAGAAGTGTTGAGGCAC...AAAAAGCCACCTGAAAGTAAAACTACTGACTCGTGTATTAGTGAGTATAATCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp GCACAGCTGGCATCCAACTTCTTGATCATTTGCTTGAGAATACTCAGGGCAAGAATGTACAAGTTCTGCTaGCTGCTCATTTATCAAGAT +
Preference number: 4 (lower is better)
Translates to: AQLASNFLIICLRILRARMYKFC*LLIYQD
Trigger: ATCTTGATAAATGAGCAGTCAGCAGAACTTGTACAT...TCTTGCCCTGAGTATTCTCAAGCAAATGATCAAGAAGTTGGATGCCAGCTGTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp ATCTTCATTCCGTCTCTCTTCATCATGCCATTGACTTCAGAAACTCCAGAATTTGCATTCAGAGTAGGGTaGAGCTCAGTTTCATCTTCC +
Preference number: 4 (lower is better)
Translates to: IFIPSLFIMPLTSETPEFAFRVG*SSVSSS
Trigger: GGAAGATGAAACTGAGCTTCACCCTACTCTGAATGC...AAATTCTGGAGTTTCTGAAGTCAATGGCATGATGAAGAGAGACGGAATGAAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp CAAAATCTAACTACTCCTCATTTGTCCTTGGCAGTTTTCTATCTTAGTCATTTGCTTGTCCACCAACACTaGGCACAGTGCCTTCTTCCA +
Preference number: 4 (lower is better)
Translates to: QNLTTPHLSLAVFYLSHLLVHQH*AQCLLP
Trigger: TGGAAGAAGGCACTGTGCTCAGTGTTGGTGGACAAG...CAAATGACTAAGATAGAAAACTGCCAAGGACAAATGAGGAGTAGTTAGATTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp ATTAGAATACTTGAACAGAACAGGAGCCTCATAGCATACCATGCAAGGCTAAAGGAAAAACCAGAGAGGTaGATATGTGAGCTGATGCTG +
Preference number: 4 (lower is better)
Translates to: IRILEQNRSLIAYHARLKEKPER*ICELML
Trigger: CAGCATCAGCTCACATATTCACCTCTCTGGTTTTTC...CTTTAGCCTTGCATGGTATGCTATGAGGCTCCTGTTCTGTTCAAGTATTCTAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp CTCCTACTTCTGATAGTACATATTATTCTATTTGCAGCCTCTGTTCGATCCTCACGGATTATCTGTTTCTaGACCTCCACCTGCTCATAC +
Preference number: 4 (lower is better)
Translates to: LLLLIVHIILFAASVRSSRIICF*TSTCSY
Trigger: GTATGAGCAGGTGGAGGTTCAGAAACAGATAATCCG...TGAGGATCGAACAGAGGCTGCAAATAGAATAATATGTACTATCAGAAGTAGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527805.6
CDS-3UTR TCA 90 bp ATAGACAGATACAGACAGAGTGCTTTCTTTGGTGAAGTTTCATTTCATGAGGAAAAGGGAGGTATGGCTTaGAGGGCTACCTATCAGGTA +
Preference number: 4 (lower is better)
Translates to: IDRYRQSAFFGEVSFHEEKGGMA*RATYQV
Trigger: TACCTGATAGGTAGCCCTTCAAGCCATACCTCCCTT...TTCCTCATGAAATGAAACTTCACCAAAGAAAGCACTCTGTCTGTATCTGTCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530958.5
CDS-3UTR TCA 90 bp ATAGACAGATACAGACAGAGTGCTTTCTTTGGTGAAGTTTCATTTCATGAGGAAAGACTGGGGACTGTTTaGGGGTTGGAAAGAAAGGGA +
Preference number: 4 (lower is better)
Translates to: IDRYRQSAFFGEVSFHEERLGTV*GLERKG
Trigger: TCCCTTTCTTTCCAACCCTCAAACAGTCCCCAGTCT...TTCCTCATGAAATGAAACTTCACCAAAGAAAGCACTCTGTCTGTATCTGTCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530958.5
CDS-3UTR GCA 90 bp ATAGACAGATACAGACAGAGTGCTTTCTTTGGTGAAGTTTCATTTCATGAGGAAGCTAACGCTCACGAGTaGTCACCACAGGTCAAGATT +
Preference number: 4 (lower is better)
Translates to: IDRYRQSAFFGEVSFHEEANAHE*SPQVKI
Trigger: AATCTTGACCTGTGGTGAGCACTCGTGAGCGTTAGC...TTCCTCATGAAATGAAACTTCACCAAAGAAAGCACTCTGTCTGTATCTGTCTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530958.5
CDS-3UTR GCA 90 bp CAAGCCAGAGGGAACAAAGTCGGAATACCCACATATCATGTTCTTCTCCACTTAAAACTACTGATTTCCTaGATCTTTTTCTGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: QARGNKVGIPTYHVLLHLKLLIS*IFFCLE
Trigger: CTCCAGGCAGAAAAAGATGCAGGAAATCAGTAGTTT...TAAGTGGAGAAGAACATGATATGTGGGTATTCCGACTTTGTTCCCTCTGGCTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR GCA 90 bp GCTTCTTCTGGCTACCTCTGGTTTAGTCAGAAATTCATCTCTGTTTGCATTTGCTATACTGGTGGTCAGTaGCAAAGTCAAACAGCATAC +
Preference number: 4 (lower is better)
Translates to: ASSGYLWFSQKFISVCICYTGGQ*QSQTAY
Trigger: GTATGCTGTTTGACTTTGGCACTGACCACCAGTATA...GCAAATGCAAACAGAGATGAATTTCTGACTAAACCAGAGGTAGCCAGAAGAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR GCA 90 bp CTCAATCACCCATTTGTTAATCTCCGCAGCTGGGATGAACATTTTCCTAAGGATTTGGAGGCACTTCTGTaGTATTTTCTAAGTCACCCT +
Preference number: 4 (lower is better)
Translates to: LNHPFVNLRSWDEHFPKDLEALL*YFLSHP
Trigger: AGGGTGACTTAGAAAATAGCACAGAAGTGCCTCCAA...ATCCTTAGGAAAATGTTCATCCCAGCTGCGGAGATTAACAAATGGGTGATTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR GCA 90 bp AGCCAGAGGGAACAAAGTCGGAATACCCACATATCATGTTCTTCTCCACTTAATTTGGAGGCACTTCTGTaGTATTTTCTAAGTCACCCT +
Preference number: 4 (lower is better)
Translates to: SQREQSRNTHISCSSPLNLEALL*YFLSHP
Trigger: AGGGTGACTTAGAAAATAGCACAGAAGTGCCTCCAA...ATTAAGTGGAGAAGAACATGATATGTGGGTATTCCGACTTTGTTCCCTCTGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR GCA 90 bp AGCCAAGAAATTAAAATAAGAATGGGCTTGTGTGCAGCAACAGCCCTGGGAATACTTTCTCCTGCACATTaGATTAGAGACTTGGCTTTC +
Preference number: 4 (lower is better)
Translates to: SQEIKIRMGLCAATALGILSPAH*IRDLAF
Trigger: GAAAGCCAAGTCTCTAATGCAATGTGCAGGAGAAAG...TATTCCCAGGGCTGTTGCTGCACACAAGCCCATTCTTATTTTAATTTCTTGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR GCA 90 bp CTCAATCACCCATTTGTTAATCTCCGCAGCTGGGATGAACATTTTCCTAAGGATCTTTCTCCTGCACATTaGATTAGAGACTTGGCTTTC +
Preference number: 4 (lower is better)
Translates to: LNHPFVNLRSWDEHFPKDLSPAH*IRDLAF
Trigger: GAAAGCCAAGTCTCTAATGCAATGTGCAGGAGAAAG...ATCCTTAGGAAAATGTTCATCCCAGCTGCGGAGATTAACAAATGGGTGATTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR GCA 90 bp TTCAAGAACACCACTTCGCTGAGAGAGGGGAACCACCTTATAAGTACAGATAGTAGCATTAGATACATATaGAGGTGGAGGGATTTGGTA +
Preference number: 4 (lower is better)
Translates to: FKNTTSLREGNHLISTDSSIRYI*RWRDLV
Trigger: TACCAAATCCCTCCACCTGCATATGTATCTAATGCT...ACTATCTGTACTTATAAGGTGGTTCCCCTCTCTCAGCGAAGTGGTGTTCTTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR GCA 90 bp TTTGTGGCTAAAATGTTTTTCAAACAGGTAACAGCTGCTGATCGAACTTTGACAAGTCTCTCTTTGCTGTaGCATCCCACTGTCTCTGGT +
Preference number: 4 (lower is better)
Translates to: FVAKMFFKQVTAADRTLTSLSLL*HPTVSG
Trigger: ACCAGAGACAGTGGGATGGCACAGCAAAGAGAGACT...TGTCAAAGTTCGATCAGCAGCTGTTACCTGTTTGAAAAACATTTTAGCCACAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR GCA 90 bp CAGCTATTCAGAAGGCTGAGACAGGAGAATTCCTTGTACCCAGGAATTCAAGGTATTATTTGTTTCAGCTaGTTGCTCACATATGGCAAG +
Preference number: 4 (lower is better)
Translates to: QLFRRLRQENSLYPGIQGIICFS*LLTYGK
Trigger: CTTGCCATATGTGAGCAAGCAGCTGAAACAAATAAT...ACCTTGAATTCCTGGGTACAAGGAATTCTCCTGTCTCAGCCTTCTGAATAGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531525.2
CDS-3UTR GCA 90 bp GCTGGCATCCAACTTCTTGATCATTTGCTTGAGAATACTCAGGGCAAGACTCTGGCCATCTTGGATAACTaGAACAAATTGACAACTAGT +
Preference number: 4 (lower is better)
Translates to: AGIQLLDHLLENTQGKTLAILDN*NKLTTS
Trigger: ACTAGTTGTCAATTTGTTGCAGTTATCCAAGATGGC...CAGAGTCTTGCCCTGAGTATTCTCAAGCAAATGATCAAGAAGTTGGATGCCAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR GCA 90 bp ACTGTCTCAGGAGTAGGAAGGATTTTGCCCTGTTCAAAAGCAACACCTAGATCTCATATTCCTCCATGCTaGTTGGTAATGAAGTTCTTC +
Preference number: 4 (lower is better)
Translates to: TVSGVGRILPCSKATPRSHIPPC*LVMKFF
Trigger: GAAGAACTTCATTACCAAGCAGCATGGAGGAATATG...AGATCTAGGTGTTGCTTTTGAACAGGGCAAAATCCTTCCTACTCCTGAGACAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR GCA 90 bp AAAGGCATCAATCAAATATTCTGCCCACTAGCACAAGGAGATGAGGAGGAAGTGCATATTCCTCCATGCTaGTTGGTAATGAAGTTCTTC +
Preference number: 4 (lower is better)
Translates to: KGINQIFCPLAQGDEEEVHIPPC*LVMKFF
Trigger: GAAGAACTTCATTACCAAGCAGCATGGAGGAATATG...CACTTCCTCCTCATCTCCTTGTGCTAGTGGGCAGAATATTTGATTGATGCCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR GCA 90 bp CCAGAATTTTCAAGCCAGAGGGAACAAAGTCGGAATACCCACATATCATGTTCTCTGCATATTCCTCCATaGTGCTTGGTAATGAAGTTC +
Preference number: 4 (lower is better)
Translates to: PEFSSQREQSRNTHISCSLHIPP*CLVMKF
Trigger: GAACTTCATTACCAAGCAGCATGGAGGAATATGCAG...AGAACATGATATGTGGGTATTCCGACTTTGTTCCCTCTGGCTTGAAAATTCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR GCA 90 bp CATCTTCCCTCCACCACAGCCATACAAACTATCTGGCTCCCCTATACTTCTGTATTTAATTTGAAATATTaGCCTTTCAGGGAGCTGAGT +
Preference number: 4 (lower is better)
Translates to: HLPSTTAIQTIWLPYTSVFNLKY*PFRELS
Trigger: ACTCAGCTCCCTGAAAGGGCAATATTTCAAATTAAA...TACAGAAGTATAGGGGAGCCAGATAGTTTGTATGGCTGTGGTGGAGGGAAGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR GCA 90 bp CAAGCCAGAGGGAACAAAGTCGGAATACCCACATATCATGTTCTTCTCCACTTAATAAGCATCACAAAGTaGCTCAACACTTCTGACCAT +
Preference number: 4 (lower is better)
Translates to: QARGNKVGIPTYHVLLHLISITK*LNTSDH
Trigger: ATGGTCAGAAGTGTTGAGGCACTTTGTGATGCTTAT...TAAGTGGAGAAGAACATGATATGTGGGTATTCCGACTTTGTTCCCTCTGGCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR GCA 90 bp AAAGGCATCAATCAAATATTCTGCCCACTAGCACAAGGAGATGAGGAGGAAGTGCTGCTGGAATATTTATaGCTTTTCTCTGAGTCTTCC +
Preference number: 4 (lower is better)
Translates to: KGINQIFCPLAQGDEEEVLLEYL*LFSESS
Trigger: GGAAGACTCAGAGAAAAGGCATAAATATTCCAGCAG...CACTTCCTCCTCATCTCCTTGTGCTAGTGGGCAGAATATTTGATTGATGCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR GCA 90 bp GCTGGCATCCAACTTCTTGATCATTTGCTTGAGAATACTCAGGGCAAGACTCTGAGTAATTGGCTGGTCTaGTGGAATATTTATGCCTTT +
Preference number: 4 (lower is better)
Translates to: AGIQLLDHLLENTQGKTLSNWLV*WNIYAF
Trigger: AAAGGCATAAATATTCCAGCAGACCAGCCAATTACT...CAGAGTCTTGCCCTGAGTATTCTCAAGCAAATGATCAAGAAGTTGGATGCCAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR GCA 90 bp CTAAGCACGTTTCTGCTAACCAGTTGCCACAAACCCTCAGACATTCTGTGTATGCCAAGAATTTTTCCATaGAGAAGTAACGGAAAACTG +
Preference number: 4 (lower is better)
Translates to: LSTFLLTSCHKPSDILCMPRIFP*RSNGKL
Trigger: CAGTTTTCCGTTACTTCTGCATGGAAAAATTCTTGG...CATACACAGAATGTCTGAGGGTTTGTGGCAACTGGTTAGCAGAAACGTGCTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR GCA 90 bp AGCCAAGAAATTAAAATAAGAATGGGCTTGTGTGCAGCAACAGCCCTGGGAATATCATCTTCCGGCCTCTaGTGTAAATACAAAGCTTTC +
Preference number: 4 (lower is better)
Translates to: SQEIKIRMGLCAATALGISSSGL*CKYKAF
Trigger: GAAAGCTTTGTATTTACAGCAGAGGCCGGAAGATGA...TATTCCCAGGGCTGTTGCTGCACACAAGCCCATTCTTATTTTAATTTCTTGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR GCA 90 bp GAGATTATACTCACTAATACACGAGTCAGTAGTTTTACTTTCAGGTGGCTTTTTTCACCCAGGCTGGAGTaGAATGGCATGATTTTGGCC +
Preference number: 4 (lower is better)
Translates to: EIILTNTRVSSFTFRWLFSPRLE*NGMILA
Trigger: GGCCAAAATCATGCCATTGCACTCCAGCCTGGGTGA...AAAAAGCCACCTGAAAGTAAAACTACTGACTCGTGTATTAGTGAGTATAATCTC
42% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR GCA 90 bp CTACTGAACCCAAATATGTCTGTATCACAGCACATTATGAACTCTGGTTTACTTAAGGCTTCTACCATCTaGCAAGGTAACACTGCGAGG +
Preference number: 4 (lower is better)
Translates to: LLNPNMSVSQHIMNSGLLKASTI*QGNTAR
Trigger: CCTCGCAGTGTTACCTTGGCAGATGGTAGAAGCCTT...AAGTAAACCAGAGTTCATAATGTGCTGTGATACAGACATATTTGGGTTCAGTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530958.5
CDS-3UTR GCA 90 bp CAGTGGTGTTTACAACGAATTGATCACAACCAGTTACAGATTTCTTTGTTCCTTCTATCATCACACCATTaGACTCCAGCCTGGGTGACA +
Preference number: 4 (lower is better)
Translates to: QWCLQRIDHNQLQISLFLLSSHH*TPAWVT
Trigger: TGTCACCCAGGCTGGAGTGCAATGGTGTGATGATAG...AAGGAACAAAGAAATCTGTAACTGGTTGTGATCAATTCGTTGTAAACACCACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638443.1
CDS-3UTR CCA 90 bp ATAGACAGATACAGACAGAGTGCTTTCTTTGGTGAAGTTTCATTTCATGAGGAAGCATCTTTTTCTGCCTaGAGGCTTGTGTTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: IDRYRQSAFFGEVSFHEEASFSA*RLVLRL
Trigger: CAGCCTCAACACAAGCCTCCAGGCAGAAAAAGATGC...TTCCTCATGAAATGAAACTTCACCAAAGAAAGCACTCTGTCTGTATCTGTCTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530958.5
CDS-3UTR CCA 90 bp CAGTGGTGTTTACAACGAATTGATCACAACCAGTTACAGATTTCTTTGTTCCTTGCATCTTTTTCTGCCTaGAGGCTTGTGTTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: QWCLQRIDHNQLQISLFLASFSA*RLVLRL
Trigger: CAGCCTCAACACAAGCCTCCAGGCAGAAAAAGATGC...AAGGAACAAAGAAATCTGTAACTGGTTGTGATCAATTCGTTGTAAACACCACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638443.1
CDS-3UTR CCA 90 bp AGCCAAGAAATTAAAATAAGAATGGGCTTGTGTGCAGCAACAGCCCTGGGAATACATTTTTACCGTTCCTaGAACTATACTGGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: SQEIKIRMGLCAATALGIHFYRS*NYTGGQ
Trigger: CTGACCACCAGTATAGTTCCAGGAACGGTAAAAATG...TATTCCCAGGGCTGTTGCTGCACACAAGCCCATTCTTATTTTAATTTCTTGGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CCA 90 bp TTCAAGAACACCACTTCGCTGAGAGAGGGGAACCACCTTATAAGTACAGATAGTTCTTTATCTTTTTGGTaGTGTTCACATTCTGGCACG +
Preference number: 4 (lower is better)
Translates to: FKNTTSLREGNHLISTDSSLSFW*CSHSGT
Trigger: CGTGCCAGAATGTGAACACCACCAAAAAGATAAAGA...ACTATCTGTACTTATAAGGTGGTTCCCCTCTCTCAGCGAAGTGGTGTTCTTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CCA 90 bp CTCCACCACAGCCATACAAACTATCTGGCTCCCCTATACTTCTGTAGATTTCTAAAGCCAATACTGGACTaGTGCTTTTCTATACCACAT +
Preference number: 4 (lower is better)
Translates to: LHHSHTNYLAPLYFCRFLKPILD*CFSIPH
Trigger: ATGTGGTATAGAAAAGCACCAGTCCAGTATTGGCTT...TAGAAATCTACAGAAGTATAGGGGAGCCAGATAGTTTGTATGGCTGTGGTGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CCA 90 bp ATTAGAATACTTGAACAGAACAGGAGCCTCATAGCATACCATGCAAGGCTAAAGTCCTTGAGATTCTGGTaGACAGAGAAGCCAATACTG +
Preference number: 4 (lower is better)
Translates to: IRILEQNRSLIAYHARLKSLRFW*TEKPIL
Trigger: CAGTATTGGCTTCTCTGTCCACCAGAATCTCAAGGA...CTTTAGCCTTGCATGGTATGCTATGAGGCTCCTGTTCTGTTCAAGTATTCTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CCA 90 bp CATCTTCCCTCCACCACAGCCATACAAACTATCTGGCTCCCCTATACTTCTGTAAGATGCAATCTTATTTaGACTCTTCTTGGTACAGTT +
Preference number: 4 (lower is better)
Translates to: HLPSTTAIQTIWLPYTSVRCNLI*TLLGTV
Trigger: AACTGTACCAAGAAGAGTCCAAATAAGATTGCATCT...TACAGAAGTATAGGGGAGCCAGATAGTTTGTATGGCTGTGGTGGAGGGAAGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CCA 90 bp AGCCAAGAAATTAAAATAAGAATGGGCTTGTGTGCAGCAACAGCCCTGGGAATATTCTCCACGGTCAAATaGCTTTTTGATGAAGGATGC +
Preference number: 4 (lower is better)
Translates to: SQEIKIRMGLCAATALGIFSTVK*LFDEGC
Trigger: GCATCCTTCATCAAAAAGCCATTTGACCGTGGAGAA...TATTCCCAGGGCTGTTGCTGCACACAAGCCCATTCTTATTTTAATTTCTTGGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CCA 90 bp ATTAGAATACTTGAACAGAACAGGAGCCTCATAGCATACCATGCAAGGCTAAAGAAGAACATCTTCCATTaGCAAGGGGTACTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: IRILEQNRSLIAYHARLKKNIFH*QGVLFS
Trigger: GGAGAAGAGTACCCCTTGCCAATGGAAGATGTTCTT...CTTTAGCCTTGCATGGTATGCTATGAGGCTCCTGTTCTGTTCAAGTATTCTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CCA 90 bp CATCTTCCCTCCACCACAGCCATACAAACTATCTGGCTCCCCTATACTTCTGTAGTTTTACAAACATCTTaGTCACGACGATACAAAGAA +
Preference number: 4 (lower is better)
Translates to: HLPSTTAIQTIWLPYTSVVLQTS*SRRYKE
Trigger: TTCTTTGTATCGTCGTGACCAAGATGTTTGTAAAAC...TACAGAAGTATAGGGGAGCCAGATAGTTTGTATGGCTGTGGTGGAGGGAAGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CCA 90 bp AGCCAAGAAATTAAAATAAGAATGGGCTTGTGTGCAGCAACAGCCCTGGGAATATCTCCCTTCGTGTCCTaGAACAATCTATTGATTGAC +
Preference number: 4 (lower is better)
Translates to: SQEIKIRMGLCAATALGISPFVS*NNLLID
Trigger: GTCAATCAATAGATTGTTCCAGGACACGAAGGGAGA...TATTCCCAGGGCTGTTGCTGCACACAAGCCCATTCTTATTTTAATTTCTTGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CCA 90 bp ATTAGAATACTTGAACAGAACAGGAGCCTCATAGCATACCATGCAAGGCTAAAGGGGTTCTCAGCACTATaGGACATTTCTCTCATTCCT +
Preference number: 4 (lower is better)
Translates to: IRILEQNRSLIAYHARLKGFSAL*DISLIP
Trigger: AGGAATGAGAGAAATGTCCCATAGTGCTGAGAACCC...CTTTAGCCTTGCATGGTATGCTATGAGGCTCCTGTTCTGTTCAAGTATTCTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CCA 90 bp CAAAATCTAACTACTCCTCATTTGTCCTTGGCAGTTTTCTATCTTAGTCATTTGAGTTTGCAGGGGTTGTaGATCGGCTCGTTTGCGAGA +
Preference number: 4 (lower is better)
Translates to: QNLTTPHLSLAVFYLSHLSLQGL*IGSFAR
Trigger: TCTCGCAAACGAGCCGATCCACAACCCCTGCAAACT...CAAATGACTAAGATAGAAAACTGCCAAGGACAAATGAGGAGTAGTTAGATTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CCA 90 bp ATCCAACTTCTTGATCATTTGCTTGAGAATACTCAGGGCAAGACTCTGCTCCTTGCCATACAAACTATCTaGCTCCCCTATACTTCTGTA +
Preference number: 4 (lower is better)
Translates to: IQLLDHLLENTQGKTLLLAIQTI*LPYTSV
Trigger: TACAGAAGTATAGGGGAGCCAGATAGTTTGTATGGC...AAGGAGCAGAGTCTTGCCCTGAGTATTCTCAAGCAAATGATCAAGAAGTTGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CCA 90 bp GCTTCTTCTGGCTACCTCTGGTTTAGTCAGAAATTCATCTCTGTTTGCATTTGCGCCATACAAACTATCTaGCTCCCCTATACTTCTGTA +
Preference number: 4 (lower is better)
Translates to: ASSGYLWFSQKFISVCICAIQTI*LPYTSV
Trigger: TACAGAAGTATAGGGGAGCCAGATAGTTTGTATGGC...GCAAATGCAAACAGAGATGAATTTCTGACTAAACCAGAGGTAGCCAGAAGAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CCA 90 bp ATCCAACTTCTTGATCATTTGCTTGAGAATACTCAGGGCAAGACTCTGCTCCTTGAAGGACCTCTACAATaGTTAACAGAGTTTCCTGAG +
Preference number: 4 (lower is better)
Translates to: IQLLDHLLENTQGKTLLLEGPLQ*LTEFPE
Trigger: CTCAGGAAACTCTGTTAACCATTGTAGAGGTCCTTC...AAGGAGCAGAGTCTTGCCCTGAGTATTCTCAAGCAAATGATCAAGAAGTTGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CCA 90 bp AGCCAAGAAATTAAAATAAGAATGGGCTTGTGTGCAGCAACAGCCCTGGGAATAGAAGGACCTCTACAATaGTTAACAGAGTTTCCTGAG +
Preference number: 4 (lower is better)
Translates to: SQEIKIRMGLCAATALGIEGPLQ*LTEFPE
Trigger: CTCAGGAAACTCTGTTAACCATTGTAGAGGTCCTTC...TATTCCCAGGGCTGTTGCTGCACACAAGCCCATTCTTATTTTAATTTCTTGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CCA 90 bp GCTAACCAGTTGCCACAAACCCTCAGACATTCTGTGTATGTAAGTTTTAGGCTGCTTTCAAAGGATTCATaGTCCAGTCAAAGAGTGGAT +
Preference number: 4 (lower is better)
Translates to: ANQLPQTLRHSVYVSFRLLSKDS*SSQRVD
Trigger: ATCCACTCTTTGACTGGACCATGAATCCTTTGAAAG...CAGCCTAAAACTTACATACACAGAATGTCTGAGGGTTTGTGGCAACTGGTTAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CCA 90 bp CAAAATCTAACTACTCCTCATTTGTCCTTGGCAGTTTTCTATCTTAGTCATTTGCAGGCTGGAGTGCAATaGCATGATTTTGGCCCACAG +
Preference number: 4 (lower is better)
Translates to: QNLTTPHLSLAVFYLSHLQAGVQ*HDFGPQ
Trigger: CTGTGGGCCAAAATCATGCCATTGCACTCCAGCCTG...CAAATGACTAAGATAGAAAACTGCCAAGGACAAATGAGGAGTAGTTAGATTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CCA 90 bp AAAGGCATCAATCAAATATTCTGCCCACTAGCACAAGGAGATGAGGAGGAAGTGTTATCTCCCTTAATCTaGACACAACTGTTCAAGCAG +
Preference number: 4 (lower is better)
Translates to: KGINQIFCPLAQGDEEEVLSPLI*TQLFKQ
Trigger: CTGCTTGAACAGTTGTGTCCAGATTAAGGGAGATAA...CACTTCCTCCTCATCTCCTTGTGCTAGTGGGCAGAATATTTGATTGATGCCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CCA 90 bp CTCAATCACCCATTTGTTAATCTCCGCAGCTGGGATGAACATTTTCCTAAGGATGTTAATCTCCGCAGCTaGGATGAACATTTTCCTAAG +
Preference number: 4 (lower is better)
Translates to: LNHPFVNLRSWDEHFPKDVNLRS*DEHFPK
Trigger: CTTAGGAAAATGTTCATCCCAGCTGCGGAGATTAAC...ATCCTTAGGAAAATGTTCATCCCAGCTGCGGAGATTAACAAATGGGTGATTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CCA 90 bp ATAGACAGATACAGACAGAGTGCTTTCTTTGGTGAAGTTTCATTTCATGAGGAAAAAGGAGGAGGTTATTaGCCAAGTCCGCTAAGCACC +
Preference number: 4 (lower is better)
Translates to: IDRYRQSAFFGEVSFHEEKGGGY*PSPLST
Trigger: GGTGCTTAGCGGACTTGGCCAATAACCTCCTCCTTT...TTCCTCATGAAATGAAACTTCACCAAAGAAAGCACTCTGTCTGTATCTGTCTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530958.5
CDS-3UTR CCA 90 bp TACCTACTGAACCCAAATATGTCTGTATCACAGCACATTATGAACTCTGGTTTACTGCGGGGCGGGAGATaGGGGAAGTATATTTACTTT +
Preference number: 4 (lower is better)
Translates to: YLLNPNMSVSQHIMNSGLLRGGR*GKYIYF
Trigger: AAAGTAAATATACTTCCCCCATCTCCCGCCCCGCAG...TAAACCAGAGTTCATAATGTGCTGTGATACAGACATATTTGGGTTCAGTAGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530958.5
CDS-3UTR CCA 90 bp CTACTGAACCCAAATATGTCTGTATCACAGCACATTATGAACTCTGGTTTACTTAGCCTCCCAAGTAACTaGGACTACAAGCAAGAGCCA +
Preference number: 4 (lower is better)
Translates to: LLNPNMSVSQHIMNSGLLSLPSN*DYKQEP
Trigger: TGGCTCTTGCTTGTAGTCCCAGTTACTTGGGAGGCT...AAGTAAACCAGAGTTCATAATGTGCTGTGATACAGACATATTTGGGTTCAGTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530958.5
3UTR CAA 72 bp GCCTCCCATCATCTTGGTCCCCATTCTAGCAGCCAATaGGTACATAAGAGGCAAAAATTTATATGTTGGAAT +
Preference number: 4 (lower is better)
Translates to: ASHHLGPHSSSQ*VHKRQKFICWN
Trigger: ATTCCAACATATAAATTTTTGCCTCTTATGTACCAATTGGCTGCTAGAATGGGGACCAAGATGATGGGAGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR CAA 72 bp GGTTTACTTGGGTTTTCTTCTGCCACTGTCAACTCCTaGACGATGGAGATGGTATTTTTCAACTGTAATTCC +
Preference number: 4 (lower is better)
Translates to: GLLGFSSATVNS*TMEMVFFNCNS
Trigger: GGAATTACAGTTGAAAAATACCATCTCCATCGTCAAGGAGTTGACAGTGGCAGAAGAAAACCCAAGTAAACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530958.5
CDS-3UTR TCA 90 bp AGCCAGAGGGAACAAAGTCGGAATACCCACATATCATGTTCTTCTCCACTTAATTCTATGAACATCTTGTaGAGGTTTCAGATAGAGCCT +
Preference number: 4 (lower is better)
Translates to: SQREQSRNTHISCSSPLNSMNIL*RFQIEP
Trigger: AGGCTCTATCTGAAACCTTCACAAGATGTTCATAGA...ATTAAGTGGAGAAGAACATGATATGTGGGTATTCCGACTTTGTTCCCTCTGGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp CCAGAATTTTCAAGCCAGAGGGAACAAAGTCGGAATACCCACATATCATGTTCTCCTCTACTTCCTATATaGCTTATCTCATTCACTAGC +
Preference number: 4 (lower is better)
Translates to: PEFSSQREQSRNTHISCSPLLPI*LISFTS
Trigger: GCTAGTGAATGAGATAAGTCATATAGGAAGTAGAGG...AGAACATGATATGTGGGTATTCCGACTTTGTTCCCTCTGGCTTGAAAATTCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp TCCTCTTTGGCTCTTTTCAGGAGAGCTTGCTTGTTTTCAAATTCCGATGATTTCTTTGACCTCTTGTCTTaGCACAATGCAACTTCCGTA +
Preference number: 4 (lower is better)
Translates to: SSLALFRRACLFSNSDDFFDLLS*HNATSV
Trigger: TACGGAAGTTGCATTGTGTCAAGACAAGAGGTCAAA...GAAATCATCGGAATTTGAAAACAAGCAAGCTCTCCTGAAAAGAGCCAAAGAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp ATTAGAATACTTGAACAGAACAGGAGCCTCATAGCATACCATGCAAGGCTAAAGTTTGACCTCTTGTCTTaGCACAATGCAACTTCCGTA +
Preference number: 4 (lower is better)
Translates to: IRILEQNRSLIAYHARLKFDLLS*HNATSV
Trigger: TACGGAAGTTGCATTGTGTCAAGACAAGAGGTCAAA...CTTTAGCCTTGCATGGTATGCTATGAGGCTCCTGTTCTGTTCAAGTATTCTAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp ATTAGAATACTTGAACAGAACAGGAGCCTCATAGCATACCATGCAAGGCTAAAGGACACAGTATTGGTCTaGGCAGTAGTTACACACAAA +
Preference number: 4 (lower is better)
Translates to: IRILEQNRSLIAYHARLKDTVLV*AVVTHK
Trigger: TTTGTGTGTAACTACTGCTCAGACCAATACTGTGTC...CTTTAGCCTTGCATGGTATGCTATGAGGCTCCTGTTCTGTTCAAGTATTCTAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp GCTTTAAATGACTGTATAGTCACCAGATTTCCATATTCTCCTGTGTGGTCCACCGAGTCCATATTGCTTTaGCCTAGGTTTTTCACTACA +
Preference number: 4 (lower is better)
Translates to: ALNDCIVTRFPYSPVWSTESILL*PRFFTT
Trigger: TGTAGTGAAAAACCTAGGTCAAAGCAATATGGACTC...GGTGGACCACACAGGAGAATATGGAAATCTGGTGACTATACAGTCATTTAAAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp CTCCTACTTCTGATAGTACATATTATTCTATTTGCAGCCTCTGTTCGATCCTCAGTAAGAAACTGTCCTTaGGCATCCCTTGTGTTCTCA +
Preference number: 4 (lower is better)
Translates to: LLLLIVHIILFAASVRSSVRNCP*ASLVFS
Trigger: TGAGAACACAAGGGATGCTCAAGGACAGTTTCTTAC...TGAGGATCGAACAGAGGCTGCAAATAGAATAATATGTACTATCAGAAGTAGGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp ATTAGAATACTTGAACAGAACAGGAGCCTCATAGCATACCATGCAAGGCTAAAGTCAAAAGCTGTTTGCTaGAGCTTCAAAGGAAGTGCT +
Preference number: 4 (lower is better)
Translates to: IRILEQNRSLIAYHARLKSKAVC*SFKGSA
Trigger: AGCACTTCCTTTGAAGCTTCAGCAAACAGCTTTTGA...CTTTAGCCTTGCATGGTATGCTATGAGGCTCCTGTTCTGTTCAAGTATTCTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp ATTGTTCGCTGCACAGCTGGCATCCAACTTCTTGATCATTTGCTTGAGAATACTTCTCTCATTCCTTCCTaGGCTTTCAAGTATGCATTT +
Preference number: 4 (lower is better)
Translates to: IVRCTAGIQLLDHLLENTSLIPS*AFKYAF
Trigger: AAATGCATACTTGAAAGCTCAGGAAGGAATGAGAGA...AGTATTCTCAAGCAAATGATCAAGAAGTTGGATGCCAGCTGTGCAGCGAACAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp AGCCAAGAAATTAAAATAAGAATGGGCTTGTGTGCAGCAACAGCCCTGGGAATATCTCTCATTCCTTCCTaGGCTTTCAAGTATGCATTT +
Preference number: 4 (lower is better)
Translates to: SQEIKIRMGLCAATALGISLIPS*AFKYAF
Trigger: AAATGCATACTTGAAAGCTCAGGAAGGAATGAGAGA...TATTCCCAGGGCTGTTGCTGCACACAAGCCCATTCTTATTTTAATTTCTTGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp ATCCAACTTCTTGATCATTTGCTTGAGAATACTCAGGGCAAGACTCTGCTCCTTACCTTTTTCACAAGGTaGGGTTCTAATCCATTCTCT +
Preference number: 4 (lower is better)
Translates to: IQLLDHLLENTQGKTLLLTFFTR*GSNPFS
Trigger: AGAGAATGGATTAGAACCTCACCTTGTGAAAAAGGT...AAGGAGCAGAGTCTTGCCCTGAGTATTCTCAAGCAAATGATCAAGAAGTTGGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp CTCAATCACCCATTTGTTAATCTCCGCAGCTGGGATGAACATTTTCCTAAGGATACCTTTTTCACAAGGTaGGGTTCTAATCCATTCTCT +
Preference number: 4 (lower is better)
Translates to: LNHPFVNLRSWDEHFPKDTFFTR*GSNPFS
Trigger: AGAGAATGGATTAGAACCTCACCTTGTGAAAAAGGT...ATCCTTAGGAAAATGTTCATCCCAGCTGCGGAGATTAACAAATGGGTGATTGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp CAAGCCAGAGGGAACAAAGTCGGAATACCCACATATCATGTTCTTCTCCACTTAGTACCAACAATAACATaGAGATGGTTTTCTAGAGCA +
Preference number: 4 (lower is better)
Translates to: QARGNKVGIPTYHVLLHLVPTIT*RWFSRA
Trigger: TGCTCTAGAAAACCATCTTCATGTTATTGTTGGTAC...TAAGTGGAGAAGAACATGATATGTGGGTATTCCGACTTTGTTCCCTCTGGCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp AAAGGCATCAATCAAATATTCTGCCCACTAGCACAAGGAGATGAGGAGGAAGTGATAATGTCCACCATCTaGTCTTTATGTAGTTCCAGT +
Preference number: 4 (lower is better)
Translates to: KGINQIFCPLAQGDEEEVIMSTI*SLCSSS
Trigger: ACTGGAACTACATAAAGATCAGATGGTGGACATTAT...CACTTCCTCCTCATCTCCTTGTGCTAGTGGGCAGAATATTTGATTGATGCCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp GGGAAAGCTATTATCTCCCTTAATCTGGACACAACTGTTCAAGCAGTCTATAATGGTAGGTCAGCATTATaGAGGTCCACTGAAGTTCTT +
Preference number: 4 (lower is better)
Translates to: GKAIISLNLDTTVQAVYNGRSAL*RSTEVL
Trigger: AAGAACTTCAGTGGACCTTCATAATGCTGACCTACC...ATTATAGACTGCTTGAACAGTTGTGTCCAGATTAAGGGAGATAATAGCTTTCCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp CAGTTGCCACAAACCCTCAGACATTCTGTGTATGTAAGTTTTAGGCTGGGATTGTATGGAAGTACAGTCTaGCAAAAGTCAGTTTTCACT +
Preference number: 4 (lower is better)
Translates to: QLPQTLRHSVYVSFRLGLYGSTV*QKSVFT
Trigger: AGTGAAAACTGACTTTTGTCAGACTGTACTTCCATA...CAATCCCAGCCTAAAACTTACATACACAGAATGTCTGAGGGTTTGTGGCAACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp AAAGGCATCAATCAAATATTCTGCCCACTAGCACAAGGAGATGAGGAGGAAGTGTATGGAAGTACAGTCTaGCAAAAGTCAGTTTTCACT +
Preference number: 4 (lower is better)
Translates to: KGINQIFCPLAQGDEEEVYGSTV*QKSVFT
Trigger: AGTGAAAACTGACTTTTGTCAGACTGTACTTCCATA...CACTTCCTCCTCATCTCCTTGTGCTAGTGGGCAGAATATTTGATTGATGCCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp CACAGCCATACAAACTATCTGGCTCCCCTATACTTCTGTAGATTTCTAAGAGAACTGGTGAAAAATCCCTaGACATGTGTAGAAAGCAGA +
Preference number: 4 (lower is better)
Translates to: HSHTNYLAPLYFCRFLRELVKNP*TCVESR
Trigger: TCTGCTTTCTACACATGTTCAGGGATTTTTCACCAG...TTCTCTTAGAAATCTACAGAAGTATAGGGGAGCCAGATAGTTTGTATGGCTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000527805.6
ENST00000529588.5
ENST00000675595.1
CDS-3UTR TCA 90 bp CAAAATCTAACTACTCCTCATTTGTCCTTGGCAGTTTTCTATCTTAGTCATTTGCTTCTACTTCTTTGCTaGCGGAAGTGCAATGGTCCC +
Preference number: 4 (lower is better)
Translates to: QNLTTPHLSLAVFYLSHLLLLLC*RKCNGP
Trigger: GGGACCATTGCACTTCCGTCAGCAAAGAAGTAGAAG...CAAATGACTAAGATAGAAAACTGCCAAGGACAAATGAGGAGTAGTTAGATTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp GTAATGCCCATGCCATCCACAATATCTCTGGTGAGTCTAAAAGGAACTGTCTCAGTGTATCTGTTTGTCTaGATTTTATGTTCCCTAAGG +
Preference number: 4 (lower is better)
Translates to: VMPMPSTISLVSLKGTVSVYLFV*ILCSLR
Trigger: CCTTAGGGAACATAAAATTCAGACAAACAGATACAC...TGAGACAGTTCCTTTTAGACTCACCAGAGATATTGTGGATGGCATGGGCATTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp ATCTTCATTCCGTCTCTCTTCATCATGCCATTGACTTCAGAAACTCCAGAATTTACACTTCTGACCATCTaGGGTCTCCTACTTCTGATA +
Preference number: 4 (lower is better)
Translates to: IFIPSLFIMPLTSETPEFTLLTI*GLLLLI
Trigger: TATCAGAAGTAGGAGACCTCAGATGGTCAGAAGTGT...AAATTCTGGAGTTTCTGAAGTCAATGGCATGATGAAGAGAGACGGAATGAAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp AGCCAAGAAATTAAAATAAGAATGGGCTTGTGTGCAGCAACAGCCCTGGGAATAGGCCTGTATCTTTTATaGGCACCATCTTCATTGTTA +
Preference number: 4 (lower is better)
Translates to: SQEIKIRMGLCAATALGIGLYLL*APSSLL
Trigger: TAACAATGAAGATGGTGCTCATAAAAGATACAGGCC...TATTCCCAGGGCTGTTGCTGCACACAAGCCCATTCTTATTTTAATTTCTTGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp CTCAATCACCCATTTGTTAATCTCCGCAGCTGGGATGAACATTTTCCTAAGGATGGCCTGTATCTTTTATaGGCACCATCTTCATTGTTA +
Preference number: 4 (lower is better)
Translates to: LNHPFVNLRSWDEHFPKDGLYLL*APSSLL
Trigger: TAACAATGAAGATGGTGCTCATAAAAGATACAGGCC...ATCCTTAGGAAAATGTTCATCCCAGCTGCGGAGATTAACAAATGGGTGATTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp TTGTTCGCTGCACAGCTGGCATCCAACTTCTTGATCATTTGCTTGAGAATACTCTCTGGTCAATATCACTaGGATTTCGTTTGCATTCTT +
Preference number: 4 (lower is better)
Translates to: LFAAQLASNFLIICLRILSGQYH*DFVCIL
Trigger: AAGAATGCAAACGAAATCTCAGTGATATTGACCAGA...GAGTATTCTCAAGCAAATGATCAAGAAGTTGGATGCCAGCTGTGCAGCGAACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp TTCAAGAACACCACTTCGCTGAGAGAGGGGAACCACCTTATAAGTACAGATAGTTCTGGTCAATATCACTaGGATTTCGTTTGCATTCTT +
Preference number: 4 (lower is better)
Translates to: FKNTTSLREGNHLISTDSSGQYH*DFVCIL
Trigger: AAGAATGCAAACGAAATCTCAGTGATATTGACCAGA...ACTATCTGTACTTATAAGGTGGTTCCCCTCTCTCAGCGAAGTGGTGTTCTTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp AAAGGCATCAATCAAATATTCTGCCCACTAGCACAAGGAGATGAGGAGGAAGTGTGCAAAGTAATATTCTaGACAGTTCTCCAGAAGTCA +
Preference number: 4 (lower is better)
Translates to: KGINQIFCPLAQGDEEEVCKVIF*TVLQKS
Trigger: TGACTTCTGGAGAACTGTTCAGAATATTACTTTGCA...CACTTCCTCCTCATCTCCTTGTGCTAGTGGGCAGAATATTTGATTGATGCCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp AAAGGCATCAATCAAATATTCTGCCCACTAGCACAAGGAGATGAGGAGGAAGTGCTATTTGGTTTTCATTaGCCTTTTGAGCAACTGACT +
Preference number: 4 (lower is better)
Translates to: KGINQIFCPLAQGDEEEVLFGFH*PFEQLT
Trigger: AGTCAGTTGCTCAAAAGGTCAATGAAAACCAAATAG...CACTTCCTCCTCATCTCCTTGTGCTAGTGGGCAGAATATTTGATTGATGCCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp GTATCACAGCACATTATGAACTCTGGTTTACTTGGGTTTTCTTCTGCCACTGTCAATAAAGCCAAGATCTaGACTAACTGGTGCCAATCA +
Preference number: 4 (lower is better)
Translates to: VSQHIMNSGLLGFSSATVNKAKI*TNWCQS
Trigger: TGATTGGCACCAGTTAGTTCAGATCTTGGCTTTATT...GACAGTGGCAGAAGAAAACCCAAGTAAACCAGAGTTCATAATGTGCTGTGATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530958.5
CDS-3UTR TCA 90 bp GTATCACAGCACATTATGAACTCTGGTTTACTTGGGTTTTCTTCTGCCACTGTCTGTGATGTATGCCTCTaGGGAAACAAAAACACAGTA +
Preference number: 4 (lower is better)
Translates to: VSQHIMNSGLLGFSSATVCDVCL*GNKNTV
Trigger: TACTGTGTTTTTGTTTCCTCAGAGGCATACATCACA...GACAGTGGCAGAAGAAAACCCAAGTAAACCAGAGTTCATAATGTGCTGTGATAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530958.5
CDS-3UTR GCA 90 bp TACCTACTGAACCCAAATATGTCTGTATCACAGCACATTATGAACTCTGGTTTATCCTGCATCTTTTTCTaGCTGGAGGCTTGTGTTGAG +
Preference number: 4 (lower is better)
Translates to: YLLNPNMSVSQHIMNSGLSCIFF*LEACVE
Trigger: CTCAACACAAGCCTCCAGGCAGAAAAAGATGCAGGA...TAAACCAGAGTTCATAATGTGCTGTGATACAGACATATTTGGGTTCAGTAGGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530958.5
CDS-3UTR GCA 90 bp GTATCACAGCACATTATGAACTCTGGTTTACTTGGGTTTTCTTCTGCCACTGTCAAACTACTGATTTCCTaGATCTTTTTCTGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: VSQHIMNSGLLGFSSATVKLLIS*IFFCLE
Trigger: CTCCAGGCAGAAAAAGATGCAGGAAATCAGTAGTTT...GACAGTGGCAGAAGAAAACCCAAGTAAACCAGAGTTCATAATGTGCTGTGATAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530958.5
CDS-3UTR GCA 90 bp GCTGGCATCCAACTTCTTGATCATTTGCTTGAGAATACTCAGGGCAAGACTCTGCTGGTGACAGATATCTaGCATCAATTCAATCAAATT +
Preference number: 4 (lower is better)
Translates to: AGIQLLDHLLENTQGKTLLVTDI*HQFNQI
Trigger: AATTTGATTGAATTGATGGCAGATATCTGTCACCAG...CAGAGTCTTGCCCTGAGTATTCTCAAGCAAATGATCAAGAAGTTGGATGCCAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR GCA 90 bp AGCCAAGAAATTAAAATAAGAATGGGCTTGTGTGCAGCAACAGCCCTGGGAATACCAATACTGGACTGGTaGTTTTCTATACCACATTCT +
Preference number: 4 (lower is better)
Translates to: SQEIKIRMGLCAATALGIPILDW*FSIPHS
Trigger: AGAATGTGGTATAGAAAAGCACCAGTCCAGTATTGG...TATTCCCAGGGCTGTTGCTGCACACAAGCCCATTCTTATTTTAATTTCTTGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR GCA 90 bp CAAGCCAGAGGGAACAAAGTCGGAATACCCACATATCATGTTCTTCTCCACTTACAGGAAAAAGCCAGATaGAATCTTATTTGGACTCTT +
Preference number: 4 (lower is better)
Translates to: QARGNKVGIPTYHVLLHLQEKAR*NLIWTL
Trigger: AAGAGTCCAAATAAGATTGCATCTGGCTTTTTCCTG...TAAGTGGAGAAGAACATGATATGTGGGTATTCCGACTTTGTTCCCTCTGGCTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR GCA 90 bp AAAGGCATCAATCAAATATTCTGCCCACTAGCACAAGGAGATGAGGAGGAAGTGCAGGAAAAAGCCAGATaGAATCTTATTTGGACTCTT +
Preference number: 4 (lower is better)
Translates to: KGINQIFCPLAQGDEEEVQEKAR*NLIWTL
Trigger: AAGAGTCCAAATAAGATTGCATCTGGCTTTTTCCTG...CACTTCCTCCTCATCTCCTTGTGCTAGTGGGCAGAATATTTGATTGATGCCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR GCA 90 bp CAAGCCAGAGGGAACAAAGTCGGAATACCCACATATCATGTTCTTCTCCACTTATCTCAGAGTCCATATTaGTTTGACCTAGGTTTTTCA +
Preference number: 4 (lower is better)
Translates to: QARGNKVGIPTYHVLLHLSQSPY*FDLGFS
Trigger: TGAAAAACCTAGGTCAAAGCAATATGGACTCTGAGA...TAAGTGGAGAAGAACATGATATGTGGGTATTCCGACTTTGTTCCCTCTGGCTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR GCA 90 bp AAAGGCATCAATCAAATATTCTGCCCACTAGCACAAGGAGATGAGGAGGAAGTGTCTCAGAGTCCATATTaGTTTGACCTAGGTTTTTCA +
Preference number: 4 (lower is better)
Translates to: KGINQIFCPLAQGDEEEVSQSPY*FDLGFS
Trigger: TGAAAAACCTAGGTCAAAGCAATATGGACTCTGAGA...CACTTCCTCCTCATCTCCTTGTGCTAGTGGGCAGAATATTTGATTGATGCCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR GCA 90 bp CAAAATCTAACTACTCCTCATTTGTCCTTGGCAGTTTTCTATCTTAGTCATTTGAGTCTCTCTTTGCTGTaGCATCCCACTGTCTCTGGT +
Preference number: 4 (lower is better)
Translates to: QNLTTPHLSLAVFYLSHLSLSLL*HPTVSG
Trigger: ACCAGAGACAGTGGGATGGCACAGCAAAGAGAGACT...CAAATGACTAAGATAGAAAACTGCCAAGGACAAATGAGGAGTAGTTAGATTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR GCA 90 bp GAGATTATACTCACTAATACACGAGTCAGTAGTTTTACTTTCAGGTGGCTTTTTGTAGCAGTCTCTCTTTaGTGTGCCATCCCACTGTCT +
Preference number: 4 (lower is better)
Translates to: EIILTNTRVSSFTFRWLFVAVSL*CAIPLS
Trigger: AGACAGTGGGATGGCACAGCAAAGAGAGACTGCTAC...AAAAAGCCACCTGAAAGTAAAACTACTGACTCGTGTATTAGTGAGTATAATCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR GCA 90 bp AACTATCTGGCTCCCCTATACTTCTGTAGATTTCTAAGAGAAGATCCTGTAAACCAGCATCGGAAAAAGTaGTCTGACTCTGAATCCAAG +
Preference number: 4 (lower is better)
Translates to: NYLAPLYFCRFLREDPVNQHRKK*SDSESK
Trigger: CTTGGATTCAGAGTCAGAGCACTTTTTCCGATGCTG...GTTTACAGGATCTTCTCTTAGAAATCTACAGAAGTATAGGGGAGCCAGATAGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR GCA 90 bp GGGAAAGCTATTATCTCCCTTAATCTGGACACAACTGTTCAAGCAGTCTATAATATGTTACTAGGGCTTTaGCCCACATTGCTTCGTGTT +
Preference number: 4 (lower is better)
Translates to: GKAIISLNLDTTVQAVYNMLLGL*PTLLRV
Trigger: AACACGAAGCAATGTGGGGCAAAGCCCTAGTAACAT...ATTATAGACTGCTTGAACAGTTGTGTCCAGATTAAGGGAGATAATAGCTTTCCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR GCA 90 bp CTCAATCACCCATTTGTTAATCTCCGCAGCTGGGATGAACATTTTCCTAAGGATATAAGCATCACAAAGTaGCTCAACACTTCTGACCAT +
Preference number: 4 (lower is better)
Translates to: LNHPFVNLRSWDEHFPKDISITK*LNTSDH
Trigger: ATGGTCAGAAGTGTTGAGGCACTTTGTGATGCTTAT...ATCCTTAGGAAAATGTTCATCCCAGCTGCGGAGATTAACAAATGGGTGATTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR GCA 90 bp CAGTTGCCACAAACCCTCAGACATTCTGTGTATGTAAGTTTTAGGCTGGGATTGAGTAATTGGCTGGTCTaGTGGAATATTTATGCCTTT +
Preference number: 4 (lower is better)
Translates to: QLPQTLRHSVYVSFRLGLSNWLV*WNIYAF
Trigger: AAAGGCATAAATATTCCAGCAGACCAGCCAATTACT...CAATCCCAGCCTAAAACTTACATACACAGAATGTCTGAGGGTTTGTGGCAACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR GCA 90 bp GAGATTATACTCACTAATACACGAGTCAGTAGTTTTACTTTCAGGTGGCTTTTTGCTGTCTCCTCTCCTTaGCATCGGAACCTACACAAT +
Preference number: 4 (lower is better)
Translates to: EIILTNTRVSSFTFRWLFAVSSP*HRNLHN
Trigger: ATTGTGTAGGTTCCGATGGCAAGGAGAGGAGACAGC...AAAAAGCCACCTGAAAGTAAAACTACTGACTCGTGTATTAGTGAGTATAATCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR GCA 90 bp CTCCTACTTCTGATAGTACATATTATTCTATTTGCAGCCTCTGTTCGATCCTCAATCTGGAAGACCTGTTaGATGACAGCATCTTGTCTC +
Preference number: 4 (lower is better)
Translates to: LLLLIVHIILFAASVRSSIWKTC*MTASCL
Trigger: GAGACAAGATGCTGTCATGCAACAGGTCTTCCAGAT...TGAGGATCGAACAGAGGCTGCAAATAGAATAATATGTACTATCAGAAGTAGGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR GCA 90 bp CAAAATCTAACTACTCCTCATTTGTCCTTGGCAGTTTTCTATCTTAGTCATTTGAGGAGGAAGTGTGTTTaGCTTGGCCTGGGAAATCTC +
Preference number: 4 (lower is better)
Translates to: QNLTTPHLSLAVFYLSHLRRKCV*LGLGNL
Trigger: GAGATTTCCCAGGCCAAGGCAAACACACTTCCTCCT...CAAATGACTAAGATAGAAAACTGCCAAGGACAAATGAGGAGTAGTTAGATTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR GCA 90 bp ATAGACAGATACAGACAGAGTGCTTTCTTTGGTGAAGTTTCATTTCATGAGGAACCACTGCACCCTGCCTaGTTTCACTTTTATGGTACT +
Preference number: 4 (lower is better)
Translates to: IDRYRQSAFFGEVSFHEEPLHPA*FHFYGT
Trigger: AGTACCATAAAAGTGAAAGCAGGCAGGGTGCAGTGG...TTCCTCATGAAATGAAACTTCACCAAAGAAAGCACTCTGTCTGTATCTGTCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530958.5
CDS-3UTR CCA 90 bp ATTAGAATACTTGAACAGAACAGGAGCCTCATAGCATACCATGCAAGGCTAAAGCTTTTTCTTGGGTTTTaGCTCCTTTCGGATGATGGA +
Preference number: 4 (lower is better)
Translates to: IRILEQNRSLIAYHARLKLFLGF*LLSDDG
Trigger: TCCATCATCCGAAAGGAGCCAAAACCCAAGAAAAAG...CTTTAGCCTTGCATGGTATGCTATGAGGCTCCTGTTCTGTTCAAGTATTCTAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CCA 90 bp CTCAATCACCCATTTGTTAATCTCCGCAGCTGGGATGAACATTTTCCTAAGGATAACTACCCTGAATTATaGCTCCAAGTAAGCCAAAGT +
Preference number: 4 (lower is better)
Translates to: LNHPFVNLRSWDEHFPKDNYPEL*LQVSQS
Trigger: ACTTTGGCTTACTTGGAGCCATAATTCAGGGTAGTT...ATCCTTAGGAAAATGTTCATCCCAGCTGCGGAGATTAACAAATGGGTGATTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CCA 90 bp CTCAATCACCCATTTGTTAATCTCCGCAGCTGGGATGAACATTTTCCTAAGGATTCTTTATCTTTTTGGTaGTGTTCACATTCTGGCACG +
Preference number: 4 (lower is better)
Translates to: LNHPFVNLRSWDEHFPKDSLSFW*CSHSGT
Trigger: CGTGCCAGAATGTGAACACCACCAAAAAGATAAAGA...ATCCTTAGGAAAATGTTCATCCCAGCTGCGGAGATTAACAAATGGGTGATTGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CCA 90 bp GCACAGCTGGCATCCAACTTCTTGATCATTTGCTTGAGAATACTCAGGGCAAGACACATTCTCTCACAATaGTTAAAAAGTCCATCTTGT +
Preference number: 4 (lower is better)
Translates to: AQLASNFLIICLRILRARHILSQ*LKSPSC
Trigger: ACAAGATGGACTTTTTAACCATTGTGAGAGAATGTG...TCTTGCCCTGAGTATTCTCAAGCAAATGATCAAGAAGTTGGATGCCAGCTGTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CCA 90 bp CTCCTACTTCTGATAGTACATATTATTCTATTTGCAGCCTCTGTTCGATCCTCATCCTTGAGATTCTGGTaGACAGAGAAGCCAATACTG +
Preference number: 4 (lower is better)
Translates to: LLLLIVHIILFAASVRSSSLRFW*TEKPIL
Trigger: CAGTATTGGCTTCTCTGTCCACCAGAATCTCAAGGA...TGAGGATCGAACAGAGGCTGCAAATAGAATAATATGTACTATCAGAAGTAGGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CCA 90 bp ATTAGAATACTTGAACAGAACAGGAGCCTCATAGCATACCATGCAAGGCTAAAGTCTCCCTTCGTGTCCTaGAACAATCTATTGATTGAC +
Preference number: 4 (lower is better)
Translates to: IRILEQNRSLIAYHARLKSPFVS*NNLLID
Trigger: GTCAATCAATAGATTGTTCCAGGACACGAAGGGAGA...CTTTAGCCTTGCATGGTATGCTATGAGGCTCCTGTTCTGTTCAAGTATTCTAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CCA 90 bp GAGATTATACTCACTAATACACGAGTCAGTAGTTTTACTTTCAGGTGGCTTTTTCTGACGGAAGTGCAATaGTCCCACTGCATATTCCTC +
Preference number: 4 (lower is better)
Translates to: EIILTNTRVSSFTFRWLFLTEVQ*SHCIFL
Trigger: GAGGAATATGCAGTGGGACCATTGCACTTCCGTCAG...AAAAAGCCACCTGAAAGTAAAACTACTGACTCGTGTATTAGTGAGTATAATCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CCA 90 bp AAAGGCATCAATCAAATATTCTGCCCACTAGCACAAGGAGATGAGGAGGAAGTGAATTGGCTGGTCTGCTaGAATATTTATGCCTTTTCT +
Preference number: 4 (lower is better)
Translates to: KGINQIFCPLAQGDEEEVNWLVC*NIYAFS
Trigger: AGAAAAGGCATAAATATTCCAGCAGACCAGCCAATT...CACTTCCTCCTCATCTCCTTGTGCTAGTGGGCAGAATATTTGATTGATGCCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CCA 90 bp TCTAAGCACGTTTCTGCTAACCAGTTGCCACAAACCCTCAGACATTCTGTGTATAATTGGCTGGTCTGCTaGAATATTTATGCCTTTTCT +
Preference number: 4 (lower is better)
Translates to: SKHVSANQLPQTLRHSVYNWLVC*NIYAFS
Trigger: AGAAAAGGCATAAATATTCCAGCAGACCAGCCAATT...ATACACAGAATGTCTGAGGGTTTGTGGCAACTGGTTAGCAGAAACGTGCTTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CCA 90 bp TTGTTCGCTGCACAGCTGGCATCCAACTTCTTGATCATTTGCTTGAGAATACTCAATGTATTACACATCTaGAAGACCTGTTGCATGACA +
Preference number: 4 (lower is better)
Translates to: LFAAQLASNFLIICLRILNVLHI*KTCCMT
Trigger: TGTCATGCAACAGGTCTTCCAGATGTGTAATACATT...GAGTATTCTCAAGCAAATGATCAAGAAGTTGGATGCCAGCTGTGCAGCGAACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CCA 90 bp CTCAATCACCCATTTGTTAATCTCCGCAGCTGGGATGAACATTTTCCTAAGGATTTCTCATCACTTCCATaGTTTTCTCACAGCATCTTC +
Preference number: 4 (lower is better)
Translates to: LNHPFVNLRSWDEHFPKDFSSLP*FSHSIF
Trigger: GAAGATGCTGTGAGAAAACCATGGAAGTGATGAGAA...ATCCTTAGGAAAATGTTCATCCCAGCTGCGGAGATTAACAAATGGGTGATTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CCA 90 bp TACCTACTGAACCCAAATATGTCTGTATCACAGCACATTATGAACTCTGGTTTAGGACTGTTTGAGGGTTaGAAAGAAAGGGAGGTATGG +
Preference number: 4 (lower is better)
Translates to: YLLNPNMSVSQHIMNSGLGLFEG*KEREVW
Trigger: CCATACCTCCCTTTCTTTCCAACCCTCAAACAGTCC...TAAACCAGAGTTCATAATGTGCTGTGATACAGACATATTTGGGTTCAGTAGGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530958.5
CDS-3UTR TCA 90 bp ATAGACAGATACAGACAGAGTGCTTTCTTTGGTGAAGTTTCATTTCATGAGGAACTATCATGTTCTAGTTaGCGGCAGCAGATAAGCAGA +
Preference number: 4 (lower is better)
Translates to: IDRYRQSAFFGEVSFHEELSCSS*RQQISR
Trigger: TCTGCTTATCTGCTGCCGTCAACTAGAACATGATAG...TTCCTCATGAAATGAAACTTCACCAAAGAAAGCACTCTGTCTGTATCTGTCTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530958.5
CDS-3UTR TCA 90 bp CAGTGGTGTTTACAACGAATTGATCACAACCAGTTACAGATTTCTTTGTTCCTTCTATCATGTTCTAGTTaGCGGCAGCAGATAAGCAGA +
Preference number: 4 (lower is better)
Translates to: QWCLQRIDHNQLQISLFLLSCSS*RQQISR
Trigger: TCTGCTTATCTGCTGCCGTCAACTAGAACATGATAG...AAGGAACAAAGAAATCTGTAACTGGTTGTGATCAATTCGTTGTAAACACCACTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638443.1
CDS-3UTR TCA 90 bp CACAGCCATACAAACTATCTGGCTCCCCTATACTTCTGTAGATTTCTAAGAGAAGCCACTAAAACTCTATaGACATCTTGTGAAGGTTTC +
Preference number: 4 (lower is better)
Translates to: HSHTNYLAPLYFCRFLREATKTL*TSCEGF
Trigger: GAAACCTTCACAAGATGTTCATAGAGTTTTAGTGGC...TTCTCTTAGAAATCTACAGAAGTATAGGGGAGCCAGATAGTTTGTATGGCTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp AGCCAAGAAATTAAAATAAGAATGGGCTTGTGTGCAGCAACAGCCCTGGGAATACCTTTGGTAACAGCATaGATTATTCTAGCCACTAAA +
Preference number: 4 (lower is better)
Translates to: SQEIKIRMGLCAATALGIPLVTA*IILATK
Trigger: TTTAGTGGCTAGAATAATTCATGCTGTTACCAAAGG...TATTCCCAGGGCTGTTGCTGCACACAAGCCCATTCTTATTTTAATTTCTTGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp AGCCAAGAAATTAAAATAAGAATGGGCTTGTGTGCAGCAACAGCCCTGGGAATATCATTAAAAACCTGGTaGCAGATATCTGCCATCAAT +
Preference number: 4 (lower is better)
Translates to: SQEIKIRMGLCAATALGISLKTW*QISAIN
Trigger: ATTGATGGCAGATATCTGTCACCAGGTTTTTAATGA...TATTCCCAGGGCTGTTGCTGCACACAAGCCCATTCTTATTTTAATTTCTTGGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp ATCCAACTTCTTGATCATTTGCTTGAGAATACTCAGGGCAAGACTCTGCTCCTTTCATTAAAAACCTGGTaGCAGATATCTGCCATCAAT +
Preference number: 4 (lower is better)
Translates to: IQLLDHLLENTQGKTLLLSLKTW*QISAIN
Trigger: ATTGATGGCAGATATCTGTCACCAGGTTTTTAATGA...AAGGAGCAGAGTCTTGCCCTGAGTATTCTCAAGCAAATGATCAAGAAGTTGGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp ATTAGAATACTTGAACAGAACAGGAGCCTCATAGCATACCATGCAAGGCTAAAGTGTTGGGGTAGAAGCTaGGATAGTATCATCAGTAAT +
Preference number: 4 (lower is better)
Translates to: IRILEQNRSLIAYHARLKCWGRS*DSIISN
Trigger: ATTACTGATGATACTATCTCAGCTTCTACCCCAACA...CTTTAGCCTTGCATGGTATGCTATGAGGCTCCTGTTCTGTTCAAGTATTCTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp ATCTTCATTCCGTCTCTCTTCATCATGCCATTGACTTCAGAAACTCCAGAATTTTTTGACCTCTTGTCTTaGCACAATGCAACTTCCGTA +
Preference number: 4 (lower is better)
Translates to: IFIPSLFIMPLTSETPEFFDLLS*HNATSV
Trigger: TACGGAAGTTGCATTGTGTCAAGACAAGAGGTCAAA...AAATTCTGGAGTTTCTGAAGTCAATGGCATGATGAAGAGAGACGGAATGAAGAT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp GAGATTATACTCACTAATACACGAGTCAGTAGTTTTACTTTCAGGTGGCTTTTTGATCCAGTGATTCCTTaGGATTCTGGTGGACAGAGA +
Preference number: 4 (lower is better)
Translates to: EIILTNTRVSSFTFRWLFDPVIP*DSGGQR
Trigger: TCTCTGTCCACCAGAATCTCAAGGAATCACTGGATC...AAAAAGCCACCTGAAAGTAAAACTACTGACTCGTGTATTAGTGAGTATAATCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp GGGAAAGCTATTATCTCCCTTAATCTGGACACAACTGTTCAAGCAGTCTATAATAGTATCATCTTCCATTaGTTCTACTTCTCCACGGTC +
Preference number: 4 (lower is better)
Translates to: GKAIISLNLDTTVQAVYNSIIFH*FYFSTV
Trigger: GACCGTGGAGAAGTAGAATCAATGGAAGATGATACT...ATTATAGACTGCTTGAACAGTTGTGTCCAGATTAAGGGAGATAATAGCTTTCCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp CTCCTACTTCTGATAGTACATATTATTCTATTTGCAGCCTCTGTTCGATCCTCAAGTATCATCTTCCATTaGTTCTACTTCTCCACGGTC +
Preference number: 4 (lower is better)
Translates to: LLLLIVHIILFAASVRSSSIIFH*FYFSTV
Trigger: GACCGTGGAGAAGTAGAATCAATGGAAGATGATACT...TGAGGATCGAACAGAGGCTGCAAATAGAATAATATGTACTATCAGAAGTAGGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp CAAAATCTAACTACTCCTCATTTGTCCTTGGCAGTTTTCTATCTTAGTCATTTGAGGATCCAAATCCCCTaGAAAGTCACAGAGGTCAGT +
Preference number: 4 (lower is better)
Translates to: QNLTTPHLSLAVFYLSHLRIQIP*KVTEVS
Trigger: ACTGACCTCTGTGACTTTTCAGGGGATTTGGATCCT...CAAATGACTAAGATAGAAAACTGCCAAGGACAAATGAGGAGTAGTTAGATTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp GGGAAAGCTATTATCTCCCTTAATCTGGACACAACTGTTCAAGCAGTCTATAATGCTGTCTGGCAAACCTaGCTTAATAAGTCACAACAA +
Preference number: 4 (lower is better)
Translates to: GKAIISLNLDTTVQAVYNAVWQT*LNKSQQ
Trigger: TTGTTGTGACTTATTAAGTCAGGTTTGCCAGACAGC...ATTATAGACTGCTTGAACAGTTGTGTCCAGATTAAGGGAGATAATAGCTTTCCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp AGCCAAGAAATTAAAATAAGAATGGGCTTGTGTGCAGCAACAGCCCTGGGAATAATAATGTCCACCATCTaGTCTTTATGTAGTTCCAGT +
Preference number: 4 (lower is better)
Translates to: SQEIKIRMGLCAATALGIIMSTI*SLCSSS
Trigger: ACTGGAACTACATAAAGATCAGATGGTGGACATTAT...TATTCCCAGGGCTGTTGCTGCACACAAGCCCATTCTTATTTTAATTTCTTGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp CCAGAATTTTCAAGCCAGAGGGAACAAAGTCGGAATACCCACATATCATGTTCTGACTCCACAGCTAACTaGATTGTACTGTTTAATTTG +
Preference number: 4 (lower is better)
Translates to: PEFSSQREQSRNTHISCSDSTAN*IVLFNL
Trigger: CAAATTAAACAGTACAATTCAGTTAGCTGTGGAGTC...AGAACATGATATGTGGGTATTCCGACTTTGTTCCCTCTGGCTTGAAAATTCTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp TCCTCTTTGGCTCTTTTCAGGAGAGCTTGCTTGTTTTCAAATTCCGATGATTTCTCAATTCTTTGGTATTaGGTATCTGAAAACCGGGCT +
Preference number: 4 (lower is better)
Translates to: SSLALFRRACLFSNSDDFSILWY*VSENRA
Trigger: AGCCCGGTTTTCAGATACTCAATACCAAAGAATTGA...GAAATCATCGGAATTTGAAAACAAGCAAGCTCTCCTGAAAAGAGCCAAAGAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp CTCAATCACCCATTTGTTAATCTCCGCAGCTGGGATGAACATTTTCCTAAGGATGTGTATCTGTTTGTCTaGATTTTATGTTCCCTAAGG +
Preference number: 4 (lower is better)
Translates to: LNHPFVNLRSWDEHFPKDVYLFV*ILCSLR
Trigger: CCTTAGGGAACATAAAATTCAGACAAACAGATACAC...ATCCTTAGGAAAATGTTCATCCCAGCTGCGGAGATTAACAAATGGGTGATTGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp GAGATTATACTCACTAATACACGAGTCAGTAGTTTTACTTTCAGGTGGCTTTTTGCATTCAGAGTAGGGTaGAGCTCAGTTTCATCTTCC +
Preference number: 4 (lower is better)
Translates to: EIILTNTRVSSFTFRWLFAFRVG*SSVSSS
Trigger: GGAAGATGAAACTGAGCTTCACCCTACTCTGAATGC...AAAAAGCCACCTGAAAGTAAAACTACTGACTCGTGTATTAGTGAGTATAATCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp TGGTCCACCTTAATTTCCATAGTAGGGACAACAACATCTTCTAAATTCTTAAGTGCATTCAGAGTAGGGTaGAGCTCAGTTTCATCTTCC +
Preference number: 4 (lower is better)
Translates to: WSTLISIVGTTTSSKFLSAFRVG*SSVSSS
Trigger: GGAAGATGAAACTGAGCTTCACCCTACTCTGAATGC...ACTTAAGAATTTAGAAGATGTTGTTGTCCCTACTATGGAAATTAAGGTGGACCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp GAGATTATACTCACTAATACACGAGTCAGTAGTTTTACTTTCAGGTGGCTTTTTAGAGAGGTGAATATGTaGGCTGATGCTGTAGCTGTC +
Preference number: 4 (lower is better)
Translates to: EIILTNTRVSSFTFRWLFREVNM*ADAVAV
Trigger: GACAGCTACAGCATCAGCTCACATATTCACCTCTCT...AAAAAGCCACCTGAAAGTAAAACTACTGACTCGTGTATTAGTGAGTATAATCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp CTCAATCACCCATTTGTTAATCTCCGCAGCTGGGATGAACATTTTCCTAAGGATTGCAAAGTAATATTCTaGACAGTTCTCCAGAAGTCA +
Preference number: 4 (lower is better)
Translates to: LNHPFVNLRSWDEHFPKDCKVIF*TVLQKS
Trigger: TGACTTCTGGAGAACTGTTCAGAATATTACTTTGCA...ATCCTTAGGAAAATGTTCATCCCAGCTGCGGAGATTAACAAATGGGTGATTGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp AGCCAAGAAATTAAAATAAGAATGGGCTTGTGTGCAGCAACAGCCCTGGGAATACATAATATGGGTCAGTaGCTTAGCATACAACAACTA +
Preference number: 4 (lower is better)
Translates to: SQEIKIRMGLCAATALGIHNMGQ*LSIQQL
Trigger: TAGTTGTTGTATGCTAAGTCACTGACCCATATTATG...TATTCCCAGGGCTGTTGCTGCACACAAGCCCATTCTTATTTTAATTTCTTGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp CTCAATCACCCATTTGTTAATCTCCGCAGCTGGGATGAACATTTTCCTAAGGATCTATTTGGTTTTCATTaGCCTTTTGAGCAACTGACT +
Preference number: 4 (lower is better)
Translates to: LNHPFVNLRSWDEHFPKDLFGFH*PFEQLT
Trigger: AGTCAGTTGCTCAAAAGGTCAATGAAAACCAAATAG...ATCCTTAGGAAAATGTTCATCCCAGCTGCGGAGATTAACAAATGGGTGATTGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp ATTAGAATACTTGAACAGAACAGGAGCCTCATAGCATACCATGCAAGGCTAAAGCATAATTCCAAATTGTaGTGTATGCCTCACTGCACT +
Preference number: 4 (lower is better)
Translates to: IRILEQNRSLIAYHARLKHNSKL*CMPHCT
Trigger: AGTGCAGTGAGGCATACATCACAATTTGGAATTATG...CTTTAGCCTTGCATGGTATGCTATGAGGCTCCTGTTCTGTTCAAGTATTCTAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452508.6
CDS-3UTR TCA 90 bp ATAGACAGATACAGACAGAGTGCTTTCTTTGGTGAAGTTTCATTTCATGAGGAATCTCATCCATTCCTATaGCTTCAGCAGCTGAAAACC +
Preference number: 4 (lower is better)
Translates to: IDRYRQSAFFGEVSFHEESHPFL*LQQLKT
Trigger: GGTTTTCAGCTGCTGAAGTCATAGGAATGGATGAGA...TTCCTCATGAAATGAAACTTCACCAAAGAAAGCACTCTGTCTGTATCTGTCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530958.5
CDS-3UTR TCA 90 bp ATAGACAGATACAGACAGAGTGCTTTCTTTGGTGAAGTTTCATTTCATGAGGAACATGCTTACAGTGCCTaGAACACAGCAAATGTTAGC +
Preference number: 4 (lower is better)
Translates to: IDRYRQSAFFGEVSFHEEHAYSA*NTANVS
Trigger: GCTAACATTTGCTGTGTTTCAGGCACTGTAAGCATG...TTCCTCATGAAATGAAACTTCACCAAAGAAAGCACTCTGTCTGTATCTGTCTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530958.5
CDS-3UTR TCA 90 bp ATAGACAGATACAGACAGAGTGCTTTCTTTGGTGAAGTTTCATTTCATGAGGAACTTCCTACGAGCCTCTaGATTGACGAATTCAGTGTT +
Preference number: 4 (lower is better)
Translates to: IDRYRQSAFFGEVSFHEELPTSL*IDEFSV
Trigger: AACACTGAATTCGTCAATTCAGAGGCTCGTAGGAAG...TTCCTCATGAAATGAAACTTCACCAAAGAAAGCACTCTGTCTGTATCTGTCTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530958.5
CDS-3UTR TCA 90 bp GTATCACAGCACATTATGAACTCTGGTTTACTTGGGTTTTCTTCTGCCACTGTCCATAATTCCAAATTGTaGTGTATGCCTCTGAGGAAA +
Preference number: 4 (lower is better)
Translates to: VSQHIMNSGLLGFSSATVHNSKL*CMPLRK
Trigger: TTTCCTCAGAGGCATACATCACAATTTGGAATTATG...GACAGTGGCAGAAGAAAACCCAAGTAAACCAGAGTTCATAATGTGCTGTGATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530958.5
CDS-3UTR TCA 90 bp CTTTATGTAGTTCCAGTTGTCTTCGAAGATCCTTTAGTCCTTCAAGTCTTGTCATCATCTGGCAGAGGATaGATAAAACAGGAAGAGTTC +
Preference number: 4 (lower is better)
Translates to: LYVVPVVFEDPLVLQVLSSSGRG*IKQEEF
Trigger: GAACTCTTCCTGTTTTATTCATCCTCTGCCAGATGA...TGACAAGACTTGAAGGACTAAAGGATCTTCGAAGACAACTGGAACTACATAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531525.2
CDS-3UTR GCA 90 bp CAAAATCTAACTACTCCTCATTTGTCCTTGGCAGTTTTCTATCTTAGTCATTTGTCCTGCATCTTTTTCTaGCTGGAGGCTTGTGTTGAG +
Preference number: 4 (lower is better)
Translates to: QNLTTPHLSLAVFYLSHLSCIFF*LEACVE
Trigger: CTCAACACAAGCCTCCAGGCAGAAAAAGATGCAGGA...CAAATGACTAAGATAGAAAACTGCCAAGGACAAATGAGGAGTAGTTAGATTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR GCA 90 bp ATCTTCATTCCGTCTCTCTTCATCATGCCATTGACTTCAGAAACTCCAGAATTTCTTTCTCCTGCACATTaGATTAGAGACTTGGCTTTC +
Preference number: 4 (lower is better)
Translates to: IFIPSLFIMPLTSETPEFLSPAH*IRDLAF
Trigger: GAAAGCCAAGTCTCTAATGCAATGTGCAGGAGAAAG...AAATTCTGGAGTTTCTGAAGTCAATGGCATGATGAAGAGAGACGGAATGAAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR GCA 90 bp ATCCAACTTCTTGATCATTTGCTTGAGAATACTCAGGGCAAGACTCTGCTCCTTCAACGTGTACATAGCTaGATCATATTTCTCAAGGAA +
Preference number: 4 (lower is better)
Translates to: IQLLDHLLENTQGKTLLLQRVHS*IIFLKE
Trigger: TTCCTTGAGAAATATGATGCAGCTATGTACACGTTG...AAGGAGCAGAGTCTTGCCCTGAGTATTCTCAAGCAAATGATCAAGAAGTTGGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR GCA 90 bp GGGAAAGCTATTATCTCCCTTAATCTGGACACAACTGTTCAAGCAGTCTATAATCTCTCCAGGTTCGTTTaGATCACTAACACTACTATC +
Preference number: 4 (lower is better)
Translates to: GKAIISLNLDTTVQAVYNLSRFV*ITNTTI
Trigger: GATAGTAGTGTTAGTGATGCAAACGAACCTGGAGAG...ATTATAGACTGCTTGAACAGTTGTGTCCAGATTAAGGGAGATAATAGCTTTCCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR GCA 90 bp ATCCAACTTCTTGATCATTTGCTTGAGAATACTCAGGGCAAGACTCTGCTCCTTTCTCAGAGTCCATATTaGTTTGACCTAGGTTTTTCA +
Preference number: 4 (lower is better)
Translates to: IQLLDHLLENTQGKTLLLSQSPY*FDLGFS
Trigger: TGAAAAACCTAGGTCAAAGCAATATGGACTCTGAGA...AAGGAGCAGAGTCTTGCCCTGAGTATTCTCAAGCAAATGATCAAGAAGTTGGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR GCA 90 bp GAGATTATACTCACTAATACACGAGTCAGTAGTTTTACTTTCAGGTGGCTTTTTGGCTTTGCCCCACATTaGTTCGTGTTCATATGTTCG +
Preference number: 4 (lower is better)
Translates to: EIILTNTRVSSFTFRWLFGFAPH*FVFICS
Trigger: CGAACATATGAACACGAAGCAATGTGGGGCAAAGCC...AAAAAGCCACCTGAAAGTAAAACTACTGACTCGTGTATTAGTGAGTATAATCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR GCA 90 bp CTCAATCACCCATTTGTTAATCTCCGCAGCTGGGATGAACATTTTCCTAAGGATCTTTTCAGGAGAGCTTaGTTGTTTTCAAATTCCGAT +
Preference number: 4 (lower is better)
Translates to: LNHPFVNLRSWDEHFPKDLFRRA*LFSNSD
Trigger: ATCGGAATTTGAAAACAAGCAAGCTCTCCTGAAAAG...ATCCTTAGGAAAATGTTCATCCCAGCTGCGGAGATTAACAAATGGGTGATTGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR GCA 90 bp GCTTCTTCTGGCTACCTCTGGTTTAGTCAGAAATTCATCTCTGTTTGCATTTGCCTTTTCAGGAGAGCTTaGTTGTTTTCAAATTCCGAT +
Preference number: 4 (lower is better)
Translates to: ASSGYLWFSQKFISVCICLFRRA*LFSNSD
Trigger: ATCGGAATTTGAAAACAAGCAAGCTCTCCTGAAAAG...GCAAATGCAAACAGAGATGAATTTCTGACTAAACCAGAGGTAGCCAGAAGAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR GCA 90 bp AGCCAAGAAATTAAAATAAGAATGGGCTTGTGTGCAGCAACAGCCCTGGGAATACCAAGAATTTTTCCATaGAGAAGTAACGGAAAACTG +
Preference number: 4 (lower is better)
Translates to: SQEIKIRMGLCAATALGIPRIFP*RSNGKL
Trigger: CAGTTTTCCGTTACTTCTGCATGGAAAAATTCTTGG...TATTCCCAGGGCTGTTGCTGCACACAAGCCCATTCTTATTTTAATTTCTTGGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR GCA 90 bp CCAGAATTTTCAAGCCAGAGGGAACAAAGTCGGAATACCCACATATCATGTTCTCCAAGAATTTTTCCATaGAGAAGTAACGGAAAACTG +
Preference number: 4 (lower is better)
Translates to: PEFSSQREQSRNTHISCSPRIFP*RSNGKL
Trigger: CAGTTTTCCGTTACTTCTGCATGGAAAAATTCTTGG...AGAACATGATATGTGGGTATTCCGACTTTGTTCCCTCTGGCTTGAAAATTCTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR GCA 90 bp TTGTTCGCTGCACAGCTGGCATCCAACTTCTTGATCATTTGCTTGAGAATACTCACAAGTTCTGCTGACTaGTCATTTATCAAGATATTC +
Preference number: 4 (lower is better)
Translates to: LFAAQLASNFLIICLRILTSSAD*SFIKIF
Trigger: GAATATCTTGATAAATGAGCAGTCAGCAGAACTTGT...GAGTATTCTCAAGCAAATGATCAAGAAGTTGGATGCCAGCTGTGCAGCGAACAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR GCA 90 bp AGCCAAGAAATTAAAATAAGAATGGGCTTGTGTGCAGCAACAGCCCTGGGAATAATCAATCAAATATTCTaGCCACTAGCACAAGGAGAT +
Preference number: 4 (lower is better)
Translates to: SQEIKIRMGLCAATALGIINQIF*PLAQGD
Trigger: ATCTCCTTGTGCTAGTGGGCAGAATATTTGATTGAT...TATTCCCAGGGCTGTTGCTGCACACAAGCCCATTCTTATTTTAATTTCTTGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR GCA 90 bp AAAGGCATCAATCAAATATTCTGCCCACTAGCACAAGGAGATGAGGAGGAAGTGTCAAATATGAATGAGTaGCTGCCATTGGCAATAAAA +
Preference number: 4 (lower is better)
Translates to: KGINQIFCPLAQGDEEEVSNMNE*LPLAIK
Trigger: TTTTATTGCCAATGGCAGGCACTCATTCATATTTGA...CACTTCCTCCTCATCTCCTTGTGCTAGTGGGCAGAATATTTGATTGATGCCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR GCA 90 bp AGCCAAGAAATTAAAATAAGAATGGGCTTGTGTGCAGCAACAGCCCTGGGAATATCTATCTTAGTCATTTaGAGAAAGAGTTCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: SQEIKIRMGLCAATALGISILVI*RKSSSL
Trigger: CAAGCTGGAACTCTTTCTGCAAATGACTAAGATAGA...TATTCCCAGGGCTGTTGCTGCACACAAGCCCATTCTTATTTTAATTTCTTGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR GCA 90 bp CTACTGAACCCAAATATGTCTGTATCACAGCACATTATGAACTCTGGTTTACTTATATATTTCATTCAATaGCAGGCCTCACGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: LLNPNMSVSQHIMNSGLLIYFIQ*QASRWS
Trigger: GCTCCAGCGTGAGGCCTGGCATTGAATGAAATATAT...AAGTAAACCAGAGTTCATAATGTGCTGTGATACAGACATATTTGGGTTCAGTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530958.5
CDS-3UTR GCA 90 bp GTATCACAGCACATTATGAACTCTGGTTTACTTGGGTTTTCTTCTGCCACTGTCTATACATGCTTACAGTaGCTGAAACACAGCAAATGT +
Preference number: 4 (lower is better)
Translates to: VSQHIMNSGLLGFSSATVYTCLQ*LKHSKC
Trigger: ACATTTGCTGTGTTTCAGGCACTGTAAGCATGTATA...GACAGTGGCAGAAGAAAACCCAAGTAAACCAGAGTTCATAATGTGCTGTGATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530958.5
CDS-3UTR CCA 90 bp AAAGGCATCAATCAAATATTCTGCCCACTAGCACAAGGAGATGAGGAGGAAGTGCACATTCTCTCACAATaGTTAAAAAGTCCATCTTGT +
Preference number: 4 (lower is better)
Translates to: KGINQIFCPLAQGDEEEVHILSQ*LKSPSC
Trigger: ACAAGATGGACTTTTTAACCATTGTGAGAGAATGTG...CACTTCCTCCTCATCTCCTTGTGCTAGTGGGCAGAATATTTGATTGATGCCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CCA 90 bp ACTGTCTCAGGAGTAGGAAGGATTTTGCCCTGTTCAAAAGCAACACCTAGATCTCACATTCTCTCACAATaGTTAAAAAGTCCATCTTGT +
Preference number: 4 (lower is better)
Translates to: TVSGVGRILPCSKATPRSHILSQ*LKSPSC
Trigger: ACAAGATGGACTTTTTAACCATTGTGAGAGAATGTG...AGATCTAGGTGTTGCTTTTGAACAGGGCAAAATCCTTCCTACTCCTGAGACAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CCA 90 bp TCGAACTTTGACACAATCTTCTACCAGTGTGTTATTCAGGTAGGTCAGCATTATCAGAGAAGCCAATACTaGACTGGTGCTTTTCTATAC +
Preference number: 4 (lower is better)
Translates to: SNFDTIFYQCVIQVGQHYQRSQY*TGAFLY
Trigger: GTATAGAAAAGCACCAGTCCAGTATTGGCTTCTCTG...ATAATGCTGACCTACCTGAATAACACACTGGTAGAAGATTGTGTCAAAGTTCGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CCA 90 bp GGGAAAGCTATTATCTCCCTTAATCTGGACACAACTGTTCAAGCAGTCTATAATCAGAGAAGCCAATACTaGACTGGTGCTTTTCTATAC +
Preference number: 4 (lower is better)
Translates to: GKAIISLNLDTTVQAVYNQRSQY*TGAFLY
Trigger: GTATAGAAAAGCACCAGTCCAGTATTGGCTTCTCTG...ATTATAGACTGCTTGAACAGTTGTGTCCAGATTAAGGGAGATAATAGCTTTCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CCA 90 bp ATTAGAATACTTGAACAGAACAGGAGCCTCATAGCATACCATGCAAGGCTAAAGTATTTGGACTCTTCTTaGTACAGTTGCTCAAGCAAC +
Preference number: 4 (lower is better)
Translates to: IRILEQNRSLIAYHARLKYLDSS*YSCSSN
Trigger: GTTGCTTGAGCAACTGTACCAAGAAGAGTCCAAATA...CTTTAGCCTTGCATGGTATGCTATGAGGCTCCTGTTCTGTTCAAGTATTCTAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CCA 90 bp CAAAATCTAACTACTCCTCATTTGTCCTTGGCAGTTTTCTATCTTAGTCATTTGGCACCTATGGTACTTTaGCTCTCTCCAGGTTCGTTT +
Preference number: 4 (lower is better)
Translates to: QNLTTPHLSLAVFYLSHLAPMVL*LSPGSF
Trigger: AAACGAACCTGGAGAGAGCCAAAGTACCATAGGTGC...CAAATGACTAAGATAGAAAACTGCCAAGGACAAATGAGGAGTAGTTAGATTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CCA 90 bp GTAATGCCCATGCCATCCACAATATCTCTGGTGAGTCTAAAAGGAACTGTCTCAGTTTTACAAACATCTTaGTCACGACGATACAAAGAA +
Preference number: 4 (lower is better)
Translates to: VMPMPSTISLVSLKGTVSVLQTS*SRRYKE
Trigger: TTCTTTGTATCGTCGTGACCAAGATGTTTGTAAAAC...TGAGACAGTTCCTTTTAGACTCACCAGAGATATTGTGGATGGCATGGGCATTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CCA 90 bp GCTTCTTCTGGCTACCTCTGGTTTAGTCAGAAATTCATCTCTGTTTGCATTTGCATGATTCATGGTAACTaGTTCCTTCTACTTCTTTGC +
Preference number: 4 (lower is better)
Translates to: ASSGYLWFSQKFISVCICMIHGN*FLLLLC
Trigger: GCAAAGAAGTAGAAGGAACCAGTTACCATGAATCAT...GCAAATGCAAACAGAGATGAATTTCTGACTAAACCAGAGGTAGCCAGAAGAAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CCA 90 bp TTCAAGAACACCACTTCGCTGAGAGAGGGGAACCACCTTATAAGTACAGATAGTAGTTTAGTAATTGGCTaGTCTGCTGGAATATTTATG +
Preference number: 4 (lower is better)
Translates to: FKNTTSLREGNHLISTDSSLVIG*SAGIFM
Trigger: CATAAATATTCCAGCAGACCAGCCAATTACTAAACT...ACTATCTGTACTTATAAGGTGGTTCCCCTCTCTCAGCGAAGTGGTGTTCTTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CCA 90 bp AGCCAAGAAATTAAAATAAGAATGGGCTTGTGTGCAGCAACAGCCCTGGGAATAAATGTATTACACATCTaGAAGACCTGTTGCATGACA +
Preference number: 4 (lower is better)
Translates to: SQEIKIRMGLCAATALGINVLHI*KTCCMT
Trigger: TGTCATGCAACAGGTCTTCCAGATGTGTAATACATT...TATTCCCAGGGCTGTTGCTGCACACAAGCCCATTCTTATTTTAATTTCTTGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CCA 90 bp ATTAGAATACTTGAACAGAACAGGAGCCTCATAGCATACCATGCAAGGCTAAAGTTCTCATCACTTCCATaGTTTTCTCACAGCATCTTC +
Preference number: 4 (lower is better)
Translates to: IRILEQNRSLIAYHARLKFSSLP*FSHSIF
Trigger: GAAGATGCTGTGAGAAAACCATGGAAGTGATGAGAA...CTTTAGCCTTGCATGGTATGCTATGAGGCTCCTGTTCTGTTCAAGTATTCTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CCA 90 bp AACTATCTGGCTCCCCTATACTTCTGTAGATTTCTAAGAGAAGATCCTGTAAACGAAGGACCTCTACAATaGTTAACAGAGTTTCCTGAG +
Preference number: 4 (lower is better)
Translates to: NYLAPLYFCRFLREDPVNEGPLQ*LTEFPE
Trigger: CTCAGGAAACTCTGTTAACCATTGTAGAGGTCCTTC...GTTTACAGGATCTTCTCTTAGAAATCTACAGAAGTATAGGGGAGCCAGATAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CCA 90 bp GAGATTATACTCACTAATACACGAGTCAGTAGTTTTACTTTCAGGTGGCTTTTTGCCAAAGGCAGGCAGTaGGAATTAAATGTACCTCCT +
Preference number: 4 (lower is better)
Translates to: EIILTNTRVSSFTFRWLFAKGRQ*ELNVPP
Trigger: AGGAGGTACATTTAATTCCCACTGCCTGCCTTTGGC...AAAAAGCCACCTGAAAGTAAAACTACTGACTCGTGTATTAGTGAGTATAATCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CCA 90 bp CTACTGAACCCAAATATGTCTGTATCACAGCACATTATGAACTCTGGTTTACTTAAGTATAATTTACACTaGACGCAGTGGCTCACGCCT +
Preference number: 4 (lower is better)
Translates to: LLNPNMSVSQHIMNSGLLKYNLH*TQWLTP
Trigger: AGGCGTGAGCCACTGCGTCCAGTGTAAATTATACTT...AAGTAAACCAGAGTTCATAATGTGCTGTGATACAGACATATTTGGGTTCAGTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530958.5
CDS-3UTR CCA 90 bp GTATCACAGCACATTATGAACTCTGGTTTACTTGGGTTTTCTTCTGCCACTGTCGCACATTATGAACTCTaGTTTACTTGGGTTTTCTTC +
Preference number: 4 (lower is better)
Translates to: VSQHIMNSGLLGFSSATVAHYEL*FTWVFF
Trigger: GAAGAAAACCCAAGTAAACCAGAGTTCATAATGTGC...GACAGTGGCAGAAGAAAACCCAAGTAAACCAGAGTTCATAATGTGCTGTGATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530958.5
3UTR CAA 72 bp AGTCTAAAAGGAACTGTCTCAGGAGTAGGAAGGATTTaGCCCTGTTCAAAAGCAACACCTAGATCTATATGT +
Preference number: 4 (lower is better)
Translates to: SLKGTVSGVGRI*PCSKATPRSIC
Trigger: ACATATAGATCTAGGTGTTGCTTTTGAACAGGGCAAAATCCTTCCTACTCCTGAGACAGTTCCTTTTAGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp CTACTGAACCCAAATATGTCTGTATCACAGCACATTATGAACTCTGGTTTACTTAGAGAGATCAAAAGATaGCTAGTCAAGTCGCGTAGT +
Preference number: 4 (lower is better)
Translates to: LLNPNMSVSQHIMNSGLLREIKR*LVKSRS
Trigger: ACTACGCGACTTGACTAGTCATCTTTTGATCTCTCT...AAGTAAACCAGAGTTCATAATGTGCTGTGATACAGACATATTTGGGTTCAGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530958.5
CDS-3UTR TCA 90 bp GGGAAAGCTATTATCTCCCTTAATCTGGACACAACTGTTCAAGCAGTCTATAATGTTTCAGATAGAGCCTaGAGTACACAGAGAACAATT +
Preference number: 4 (lower is better)
Translates to: GKAIISLNLDTTVQAVYNVSDRA*STQRTI
Trigger: AATTGTTCTCTGTGTACTTCAGGCTCTATCTGAAAC...ATTATAGACTGCTTGAACAGTTGTGTCCAGATTAAGGGAGATAATAGCTTTCCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp GGGAAAGCTATTATCTCCCTTAATCTGGACACAACTGTTCAAGCAGTCTATAATGCCACTAAAACTCTATaGACATCTTGTGAAGGTTTC +
Preference number: 4 (lower is better)
Translates to: GKAIISLNLDTTVQAVYNATKTL*TSCEGF
Trigger: GAAACCTTCACAAGATGTTCATAGAGTTTTAGTGGC...ATTATAGACTGCTTGAACAGTTGTGTCCAGATTAAGGGAGATAATAGCTTTCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp ATTAGAATACTTGAACAGAACAGGAGCCTCATAGCATACCATGCAAGGCTAAAGTCATTAAAAACCTGGTaGCAGATATCTGCCATCAAT +
Preference number: 4 (lower is better)
Translates to: IRILEQNRSLIAYHARLKSLKTW*QISAIN
Trigger: ATTGATGGCAGATATCTGTCACCAGGTTTTTAATGA...CTTTAGCCTTGCATGGTATGCTATGAGGCTCCTGTTCTGTTCAAGTATTCTAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp GGGAAAGCTATTATCTCCCTTAATCTGGACACAACTGTTCAAGCAGTCTATAATTCAACTAAACTACCCTaGATTATGGCTCCAAGTAAG +
Preference number: 4 (lower is better)
Translates to: GKAIISLNLDTTVQAVYNSTKLP*IMAPSK
Trigger: CTTACTTGGAGCCATAATTCAGGGTAGTTTAGTTGA...ATTATAGACTGCTTGAACAGTTGTGTCCAGATTAAGGGAGATAATAGCTTTCCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp AACTATCTGGCTCCCCTATACTTCTGTAGATTTCTAAGAGAAGATCCTGTAAACTCAACTAAACTACCCTaGATTATGGCTCCAAGTAAG +
Preference number: 4 (lower is better)
Translates to: NYLAPLYFCRFLREDPVNSTKLP*IMAPSK
Trigger: CTTACTTGGAGCCATAATTCAGGGTAGTTTAGTTGA...GTTTACAGGATCTTCTCTTAGAAATCTACAGAAGTATAGGGGAGCCAGATAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp GAGATTATACTCACTAATACACGAGTCAGTAGTTTTACTTTCAGGTGGCTTTTTAGATTCATGGATGACTaGTCCTCCACCTCCATTAGA +
Preference number: 4 (lower is better)
Translates to: EIILTNTRVSSFTFRWLFRFMDD*SSTSIR
Trigger: TCTAATGGAGGTGGAGGATCAGTCATCCATGAATCT...AAAAAGCCACCTGAAAGTAAAACTACTGACTCGTGTATTAGTGAGTATAATCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp GAGATTATACTCACTAATACACGAGTCAGTAGTTTTACTTTCAGGTGGCTTTTTGAACAATCTATTGATTaGCTCTGCAGCCAACATGCG +
Preference number: 4 (lower is better)
Translates to: EIILTNTRVSSFTFRWLFEQSID*LCSQHA
Trigger: CGCATGTTGGCTGCAGAGTCAATCAATAGATTGTTC...AAAAAGCCACCTGAAAGTAAAACTACTGACTCGTGTATTAGTGAGTATAATCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp CTCCTACTTCTGATAGTACATATTATTCTATTTGCAGCCTCTGTTCGATCCTCATCTCTCATTCCTTCCTaGGCTTTCAAGTATGCATTT +
Preference number: 4 (lower is better)
Translates to: LLLLIVHIILFAASVRSSSLIPS*AFKYAF
Trigger: AAATGCATACTTGAAAGCTCAGGAAGGAATGAGAGA...TGAGGATCGAACAGAGGCTGCAAATAGAATAATATGTACTATCAGAAGTAGGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp ATTAGAATACTTGAACAGAACAGGAGCCTCATAGCATACCATGCAAGGCTAAAGGTACCAACAATAACATaGAGATGGTTTTCTAGAGCA +
Preference number: 4 (lower is better)
Translates to: IRILEQNRSLIAYHARLKVPTIT*RWFSRA
Trigger: TGCTCTAGAAAACCATCTTCATGTTATTGTTGGTAC...CTTTAGCCTTGCATGGTATGCTATGAGGCTCCTGTTCTGTTCAAGTATTCTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp GAGATTATACTCACTAATACACGAGTCAGTAGTTTTACTTTCAGGTGGCTTTTTACAGGTAACAGCTGCTaGTCGAACTTTGACACAATC +
Preference number: 4 (lower is better)
Translates to: EIILTNTRVSSFTFRWLFTGNSC*SNFDTI
Trigger: GATTGTGTCAAAGTTCGATCAGCAGCTGTTACCTGT...AAAAAGCCACCTGAAAGTAAAACTACTGACTCGTGTATTAGTGAGTATAATCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp CAAAATCTAACTACTCCTCATTTGTCCTTGGCAGTTTTCTATCTTAGTCATTTGACAGGTAACAGCTGCTaGTCGAACTTTGACACAATC +
Preference number: 4 (lower is better)
Translates to: QNLTTPHLSLAVFYLSHLTGNSC*SNFDTI
Trigger: GATTGTGTCAAAGTTCGATCAGCAGCTGTTACCTGT...CAAATGACTAAGATAGAAAACTGCCAAGGACAAATGAGGAGTAGTTAGATTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp ATTAGAATACTTGAACAGAACAGGAGCCTCATAGCATACCATGCAAGGCTAAAGTATGGAAGTACAGTCTaGCAAAAGTCAGTTTTCACT +
Preference number: 4 (lower is better)
Translates to: IRILEQNRSLIAYHARLKYGSTV*QKSVFT
Trigger: AGTGAAAACTGACTTTTGTCAGACTGTACTTCCATA...CTTTAGCCTTGCATGGTATGCTATGAGGCTCCTGTTCTGTTCAAGTATTCTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp ATTAGAATACTTGAACAGAACAGGAGCCTCATAGCATACCATGCAAGGCTAAAGAAGCAGATTTCTCCATaGTTCATTTGTATCTTGGAG +
Preference number: 4 (lower is better)
Translates to: IRILEQNRSLIAYHARLKKQISP*FICILE
Trigger: CTCCAAGATACAAATGAATCATGGAGAAATCTGCTT...CTTTAGCCTTGCATGGTATGCTATGAGGCTCCTGTTCTGTTCAAGTATTCTAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp ATTAGAATACTTGAACAGAACAGGAGCCTCATAGCATACCATGCAAGGCTAAAGGTGTATCTGTTTGTCTaGATTTTATGTTCCCTAAGG +
Preference number: 4 (lower is better)
Translates to: IRILEQNRSLIAYHARLKVYLFV*ILCSLR
Trigger: CCTTAGGGAACATAAAATTCAGACAAACAGATACAC...CTTTAGCCTTGCATGGTATGCTATGAGGCTCCTGTTCTGTTCAAGTATTCTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp TACCTACTGAACCCAAATATGTCTGTATCACAGCACATTATGAACTCTGGTTTAGGTCCAATCTTCCTATaGAGGAAGGAATGTCTCTTA +
Preference number: 4 (lower is better)
Translates to: YLLNPNMSVSQHIMNSGLGPIFL*RKECLL
Trigger: TAAGAGACATTCCTTCCTTCATAGGAAGATTGGACC...TAAACCAGAGTTCATAATGTGCTGTGATACAGACATATTTGGGTTCAGTAGGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530958.5
CDS-3UTR TCA 90 bp CTACTGAACCCAAATATGTCTGTATCACAGCACATTATGAACTCTGGTTTACTTCCTAACCACTGTTGCTaGGATATTTCACACCAGTAT +
Preference number: 4 (lower is better)
Translates to: LLNPNMSVSQHIMNSGLLPNHCC*DISHQY
Trigger: ATACTGGTGTGAAATATCTCAGCAACAGTGGTTAGG...AAGTAAACCAGAGTTCATAATGTGCTGTGATACAGACATATTTGGGTTCAGTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530958.5
CDS-3UTR GCA 90 bp GGGAAAGCTATTATCTCCCTTAATCTGGACACAACTGTTCAAGCAGTCTATAATAAACTACTGATTTCCTaGATCTTTTTCTGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: GKAIISLNLDTTVQAVYNKLLIS*IFFCLE
Trigger: CTCCAGGCAGAAAAAGATGCAGGAAATCAGTAGTTT...ATTATAGACTGCTTGAACAGTTGTGTCCAGATTAAGGGAGATAATAGCTTTCCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR GCA 90 bp AGCCAAGAAATTAAAATAAGAATGGGCTTGTGTGCAGCAACAGCCCTGGGAATACTGGTGACAGATATCTaGCATCAATTCAATCAAATT +
Preference number: 4 (lower is better)
Translates to: SQEIKIRMGLCAATALGILVTDI*HQFNQI
Trigger: AATTTGATTGAATTGATGGCAGATATCTGTCACCAG...TATTCCCAGGGCTGTTGCTGCACACAAGCCCATTCTTATTTTAATTTCTTGGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR GCA 90 bp TCGAACTTTGACACAATCTTCTACCAGTGTGTTATTCAGGTAGGTCAGCATTATCCAATACTGGACTGGTaGTTTTCTATACCACATTCT +
Preference number: 4 (lower is better)
Translates to: SNFDTIFYQCVIQVGQHYPILDW*FSIPHS
Trigger: AGAATGTGGTATAGAAAAGCACCAGTCCAGTATTGG...ATAATGCTGACCTACCTGAATAACACACTGGTAGAAGATTGTGTCAAAGTTCGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR GCA 90 bp GGGAAAGCTATTATCTCCCTTAATCTGGACACAACTGTTCAAGCAGTCTATAATTCTTCTTGGTACAGTTaGTCAAGCAACGTGTACATA +
Preference number: 4 (lower is better)
Translates to: GKAIISLNLDTTVQAVYNSSWYS*SSNVYI
Trigger: TATGTACACGTTGCTTGAGCAACTGTACCAAGAAGA...ATTATAGACTGCTTGAACAGTTGTGTCCAGATTAAGGGAGATAATAGCTTTCCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR GCA 90 bp TCCTCTTTGGCTCTTTTCAGGAGAGCTTGCTTGTTTTCAAATTCCGATGATTTCCAGGAAAAAGCCAGATaGAATCTTATTTGGACTCTT +
Preference number: 4 (lower is better)
Translates to: SSLALFRRACLFSNSDDFQEKAR*NLIWTL
Trigger: AAGAGTCCAAATAAGATTGCATCTGGCTTTTTCCTG...GAAATCATCGGAATTTGAAAACAAGCAAGCTCTCCTGAAAAGAGCCAAAGAGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR GCA 90 bp CAAAATCTAACTACTCCTCATTTGTCCTTGGCAGTTTTCTATCTTAGTCATTTGCCTCCGAATATCAGCTaGCCTAAAGGACACAGTATT +
Preference number: 4 (lower is better)
Translates to: QNLTTPHLSLAVFYLSHLPPNIS*PKGHSI
Trigger: AATACTGTGTCCTTTAGGGCAGCTGATATTCGGAGG...CAAATGACTAAGATAGAAAACTGCCAAGGACAAATGAGGAGTAGTTAGATTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR GCA 90 bp GGGAAAGCTATTATCTCCCTTAATCTGGACACAACTGTTCAAGCAGTCTATAATAGCATTAGATACATATaGAGGTGGAGGGATTTGGTA +
Preference number: 4 (lower is better)
Translates to: GKAIISLNLDTTVQAVYNSIRYI*RWRDLV
Trigger: TACCAAATCCCTCCACCTGCATATGTATCTAATGCT...ATTATAGACTGCTTGAACAGTTGTGTCCAGATTAAGGGAGATAATAGCTTTCCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR GCA 90 bp TTTGTGGCTAAAATGTTTTTCAAACAGGTAACAGCTGCTGATCGAACTTTGACACTGCATATTCCTCCATaGTGCTTGGTAATGAAGTTC +
Preference number: 4 (lower is better)
Translates to: FVAKMFFKQVTAADRTLTLHIPP*CLVMKF
Trigger: GAACTTCATTACCAAGCAGCATGGAGGAATATGCAG...TGTCAAAGTTCGATCAGCAGCTGTTACCTGTTTGAAAAACATTTTAGCCACAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR GCA 90 bp CTCAATCACCCATTTGTTAATCTCCGCAGCTGGGATGAACATTTTCCTAAGGATTTTAATTTGAAATATTaGCCTTTCAGGGAGCTGAGT +
Preference number: 4 (lower is better)
Translates to: LNHPFVNLRSWDEHFPKDFNLKY*PFRELS
Trigger: ACTCAGCTCCCTGAAAGGGCAATATTTCAAATTAAA...ATCCTTAGGAAAATGTTCATCCCAGCTGCGGAGATTAACAAATGGGTGATTGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR GCA 90 bp AACTATCTGGCTCCCCTATACTTCTGTAGATTTCTAAGAGAAGATCCTGTAAACCTGCTGGAATATTTATaGCTTTTCTCTGAGTCTTCC +
Preference number: 4 (lower is better)
Translates to: NYLAPLYFCRFLREDPVNLLEYL*LFSESS
Trigger: GGAAGACTCAGAGAAAAGGCATAAATATTCCAGCAG...GTTTACAGGATCTTCTCTTAGAAATCTACAGAAGTATAGGGGAGCCAGATAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR GCA 90 bp CAAAATCTAACTACTCCTCATTTGTCCTTGGCAGTTTTCTATCTTAGTCATTTGATCTGGAAGACCTGTTaGATGACAGCATCTTGTCTC +
Preference number: 4 (lower is better)
Translates to: QNLTTPHLSLAVFYLSHLIWKTC*MTASCL
Trigger: GAGACAAGATGCTGTCATGCAACAGGTCTTCCAGAT...CAAATGACTAAGATAGAAAACTGCCAAGGACAAATGAGGAGTAGTTAGATTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR GCA 90 bp CTCAATCACCCATTTGTTAATCTCCGCAGCTGGGATGAACATTTTCCTAAGGATACAAGTTCTGCTGACTaGTCATTTATCAAGATATTC +
Preference number: 4 (lower is better)
Translates to: LNHPFVNLRSWDEHFPKDTSSAD*SFIKIF
Trigger: GAATATCTTGATAAATGAGCAGTCAGCAGAACTTGT...ATCCTTAGGAAAATGTTCATCCCAGCTGCGGAGATTAACAAATGGGTGATTGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR GCA 90 bp AGCCAAGAAATTAAAATAAGAATGGGCTTGTGTGCAGCAACAGCCCTGGGAATATCCTATCAGTATTTATaGTACACTTCAGGTATGGAA +
Preference number: 4 (lower is better)
Translates to: SQEIKIRMGLCAATALGISYQYL*YTSGME
Trigger: TTCCATACCTGAAGTGTAGCATAAATACTGATAGGA...TATTCCCAGGGCTGTTGCTGCACACAAGCCCATTCTTATTTTAATTTCTTGGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR GCA 90 bp CTCAATCACCCATTTGTTAATCTCCGCAGCTGGGATGAACATTTTCCTAAGGATTCCTATCAGTATTTATaGTACACTTCAGGTATGGAA +
Preference number: 4 (lower is better)
Translates to: LNHPFVNLRSWDEHFPKDSYQYL*YTSGME
Trigger: TTCCATACCTGAAGTGTAGCATAAATACTGATAGGA...ATCCTTAGGAAAATGTTCATCCCAGCTGCGGAGATTAACAAATGGGTGATTGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR GCA 90 bp TACCTACTGAACCCAAATATGTCTGTATCACAGCACATTATGAACTCTGGTTTAAAGGACCCATATACATaGTTACAGTGCCTGAAACAC +
Preference number: 4 (lower is better)
Translates to: YLLNPNMSVSQHIMNSGLKDPYT*LQCLKH
Trigger: GTGTTTCAGGCACTGTAAGCATGTATATGGGTCCTT...TAAACCAGAGTTCATAATGTGCTGTGATACAGACATATTTGGGTTCAGTAGGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530958.5
CDS-3UTR GCA 90 bp GTATCACAGCACATTATGAACTCTGGTTTACTTGGGTTTTCTTCTGCCACTGTCTATGGTGGTATCCTTTaGAAATATCAAGGATCAACT +
Preference number: 4 (lower is better)
Translates to: VSQHIMNSGLLGFSSATVYGGIL*KYQGST
Trigger: AGTTGATCCTTGATATTTGCAAAGGATACCACCATA...GACAGTGGCAGAAGAAAACCCAAGTAAACCAGAGTTCATAATGTGCTGTGATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530958.5
CDS-3UTR CCA 90 bp GGGAAAGCTATTATCTCCCTTAATCTGGACACAACTGTTCAAGCAGTCTATAATAAGCCAATACTGGACTaGTGCTTTTCTATACCACAT +
Preference number: 4 (lower is better)
Translates to: GKAIISLNLDTTVQAVYNKPILD*CFSIPH
Trigger: ATGTGGTATAGAAAAGCACCAGTCCAGTATTGGCTT...ATTATAGACTGCTTGAACAGTTGTGTCCAGATTAAGGGAGATAATAGCTTTCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CCA 90 bp AGCCAGAGGGAACAAAGTCGGAATACCCACATATCATGTTCTTCTCCACTTAATATTGCATTAGAGACTTaGCTTTCTGGAATAATTCTG +
Preference number: 4 (lower is better)
Translates to: SQREQSRNTHISCSSPLNIALET*LSGIIL
Trigger: CAGAATTATTCCAGAAAGCCAAGTCTCTAATGCAAT...ATTAAGTGGAGAAGAACATGATATGTGGGTATTCCGACTTTGTTCCCTCTGGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CCA 90 bp CTCAATCACCCATTTGTTAATCTCCGCAGCTGGGATGAACATTTTCCTAAGGATAGATGCAATCTTATTTaGACTCTTCTTGGTACAGTT +
Preference number: 4 (lower is better)
Translates to: LNHPFVNLRSWDEHFPKDRCNLI*TLLGTV
Trigger: AACTGTACCAAGAAGAGTCCAAATAAGATTGCATCT...ATCCTTAGGAAAATGTTCATCCCAGCTGCGGAGATTAACAAATGGGTGATTGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CCA 90 bp AGCCAAGAAATTAAAATAAGAATGGGCTTGTGTGCAGCAACAGCCCTGGGAATACTTACTGAGAGAAAATaGTTAATTTCCTCCAAGAGT +
Preference number: 4 (lower is better)
Translates to: SQEIKIRMGLCAATALGILTERK*LISSKS
Trigger: ACTCTTGGAGGAAATTAACCATTTTCTCTCAGTAAG...TATTCCCAGGGCTGTTGCTGCACACAAGCCCATTCTTATTTTAATTTCTTGGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CCA 90 bp CTCAATCACCCATTTGTTAATCTCCGCAGCTGGGATGAACATTTTCCTAAGGATTTCAAGTCTTGTCAATaGAAGTGCATCATAAACACT +
Preference number: 4 (lower is better)
Translates to: LNHPFVNLRSWDEHFPKDFKSCQ*KCIINT
Trigger: AGTGTTTATGATGCACTTCCATTGACAAGACTTGAA...ATCCTTAGGAAAATGTTCATCCCAGCTGCGGAGATTAACAAATGGGTGATTGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CCA 90 bp CTCAATCACCCATTTGTTAATCTCCGCAGCTGGGATGAACATTTTCCTAAGGATATTCTAGCAGCCAATTaGTACATAAGAGGCAAAAAT +
Preference number: 4 (lower is better)
Translates to: LNHPFVNLRSWDEHFPKDILAAN*YIRGKN
Trigger: ATTTTTGCCTCTTATGTACCAATTGGCTGCTAGAAT...ATCCTTAGGAAAATGTTCATCCCAGCTGCGGAGATTAACAAATGGGTGATTGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CCA 90 bp AGCCAGAGGGAACAAAGTCGGAATACCCACATATCATGTTCTTCTCCACTTAATATTCTAGCAGCCAATTaGTACATAAGAGGCAAAAAT +
Preference number: 4 (lower is better)
Translates to: SQREQSRNTHISCSSPLNILAAN*YIRGKN
Trigger: ATTTTTGCCTCTTATGTACCAATTGGCTGCTAGAAT...ATTAAGTGGAGAAGAACATGATATGTGGGTATTCCGACTTTGTTCCCTCTGGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CCA 90 bp AGCCAAGAAATTAAAATAAGAATGGGCTTGTGTGCAGCAACAGCCCTGGGAATAAGTTTAGTAATTGGCTaGTCTGCTGGAATATTTATG +
Preference number: 4 (lower is better)
Translates to: SQEIKIRMGLCAATALGISLVIG*SAGIFM
Trigger: CATAAATATTCCAGCAGACCAGCCAATTACTAAACT...TATTCCCAGGGCTGTTGCTGCACACAAGCCCATTCTTATTTTAATTTCTTGGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CCA 90 bp TCGAACTTTGACACAATCTTCTACCAGTGTGTTATTCAGGTAGGTCAGCATTATTTCTCATCACTTCCATaGTTTTCTCACAGCATCTTC +
Preference number: 4 (lower is better)
Translates to: SNFDTIFYQCVIQVGQHYFSSLP*FSHSIF
Trigger: GAAGATGCTGTGAGAAAACCATGGAAGTGATGAGAA...ATAATGCTGACCTACCTGAATAACACACTGGTAGAAGATTGTGTCAAAGTTCGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CCA 90 bp TCGAACTTTGACACAATCTTCTACCAGTGTGTTATTCAGGTAGGTCAGCATTATCTTTCAAAGGATTCATaGTCCAGTCAAAGAGTGGAT +
Preference number: 4 (lower is better)
Translates to: SNFDTIFYQCVIQVGQHYLSKDS*SSQRVD
Trigger: ATCCACTCTTTGACTGGACCATGAATCCTTTGAAAG...ATAATGCTGACCTACCTGAATAACACACTGGTAGAAGATTGTGTCAAAGTTCGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CCA 90 bp GTATCACAGCACATTATGAACTCTGGTTTACTTGGGTTTTCTTCTGCCACTGTCGCAAATTCTATGCTATaGTGGTATCCTTTGCAAATA +
Preference number: 4 (lower is better)
Translates to: VSQHIMNSGLLGFSSATVANSML*WYPLQI
Trigger: TATTTGCAAAGGATACCACCATAGCATAGAATTTGC...GACAGTGGCAGAAGAAAACCCAAGTAAACCAGAGTTCATAATGTGCTGTGATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530958.5
CDS-3UTR CCA 90 bp TACCTACTGAACCCAAATATGTCTGTATCACAGCACATTATGAACTCTGGTTTAGAACTCTGGTTTACTTaGGTTTTCTTCTGCCACTGT +
Preference number: 4 (lower is better)
Translates to: YLLNPNMSVSQHIMNSGLELWFT*VFFCHC
Trigger: ACAGTGGCAGAAGAAAACCCAAGTAAACCAGAGTTC...TAAACCAGAGTTCATAATGTGCTGTGATACAGACATATTTGGGTTCAGTAGGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530958.5
3UTR CAA 72 bp AAAGTTCTGGCCAGTATAGAGAGTTCTACAAGGTGTTaGGTGAGAATGTCCTTAATACATTCTCTTTGTGAG +
Preference number: 4 (lower is better)
Translates to: KVLASIESSTRC*VRMSLIHSLCE
Trigger: CTCACAAAGAGAATGTATTAAGGACATTCTCACCAAACACCTTGTAGAACTCTCTATACTGGCCAGAACTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp GGGAAAGCTATTATCTCCCTTAATCTGGACACAACTGTTCAAGCAGTCTATAATCCTTTGGTAACAGCATaGATTATTCTAGCCACTAAA +
Preference number: 4 (lower is better)
Translates to: GKAIISLNLDTTVQAVYNPLVTA*IILATK
Trigger: TTTAGTGGCTAGAATAATTCATGCTGTTACCAAAGG...ATTATAGACTGCTTGAACAGTTGTGTCCAGATTAAGGGAGATAATAGCTTTCCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp ATCTTCATTCCGTCTCTCTTCATCATGCCATTGACTTCAGAAACTCCAGAATTTCCTTTGGTAACAGCATaGATTATTCTAGCCACTAAA +
Preference number: 4 (lower is better)
Translates to: IFIPSLFIMPLTSETPEFPLVTA*IILATK
Trigger: TTTAGTGGCTAGAATAATTCATGCTGTTACCAAAGG...AAATTCTGGAGTTTCTGAAGTCAATGGCATGATGAAGAGAGACGGAATGAAGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp GAGATTATACTCACTAATACACGAGTCAGTAGTTTTACTTTCAGGTGGCTTTTTTTTAATCCGTCAGTCTaGGAACAGCATCCTTTGGTA +
Preference number: 4 (lower is better)
Translates to: EIILTNTRVSSFTFRWLFFNPSV*EQHPLV
Trigger: TACCAAAGGATGCTGTTCTCAGACTGACGGATTAAA...AAAAAGCCACCTGAAAGTAAAACTACTGACTCGTGTATTAGTGAGTATAATCTC
38% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp GAGATTATACTCACTAATACACGAGTCAGTAGTTTTACTTTCAGGTGGCTTTTTAGTATCATCTTCCATTaGTTCTACTTCTCCACGGTC +
Preference number: 4 (lower is better)
Translates to: EIILTNTRVSSFTFRWLFSIIFH*FYFSTV
Trigger: GACCGTGGAGAAGTAGAATCAATGGAAGATGATACT...AAAAAGCCACCTGAAAGTAAAACTACTGACTCGTGTATTAGTGAGTATAATCTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp TGGTCCACCTTAATTTCCATAGTAGGGACAACAACATCTTCTAAATTCTTAAGTGACACAGTATTGGTCTaGGCAGTAGTTACACACAAA +
Preference number: 4 (lower is better)
Translates to: WSTLISIVGTTTSSKFLSDTVLV*AVVTHK
Trigger: TTTGTGTGTAACTACTGCTCAGACCAATACTGTGTC...ACTTAAGAATTTAGAAGATGTTGTTGTCCCTACTATGGAAATTAAGGTGGACCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp CAAAATCTAACTACTCCTCATTTGTCCTTGGCAGTTTTCTATCTTAGTCATTTGTCAAAAGCTGTTTGCTaGAGCTTCAAAGGAAGTGCT +
Preference number: 4 (lower is better)
Translates to: QNLTTPHLSLAVFYLSHLSKAVC*SFKGSA
Trigger: AGCACTTCCTTTGAAGCTTCAGCAAACAGCTTTTGA...CAAATGACTAAGATAGAAAACTGCCAAGGACAAATGAGGAGTAGTTAGATTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp CAAAATCTAACTACTCCTCATTTGTCCTTGGCAGTTTTCTATCTTAGTCATTTGGTAATGACACATCCATaGTACAAGAAGGCCTTTGGT +
Preference number: 4 (lower is better)
Translates to: QNLTTPHLSLAVFYLSHLVMTHP*YKKAFG
Trigger: ACCAAAGGCCTTCTTGTATCATGGATGTGTCATTAC...CAAATGACTAAGATAGAAAACTGCCAAGGACAAATGAGGAGTAGTTAGATTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp AACTATCTGGCTCCCCTATACTTCTGTAGATTTCTAAGAGAAGATCCTGTAAACTATGGAAGTACAGTCTaGCAAAAGTCAGTTTTCACT +
Preference number: 4 (lower is better)
Translates to: NYLAPLYFCRFLREDPVNYGSTV*QKSVFT
Trigger: AGTGAAAACTGACTTTTGTCAGACTGTACTTCCATA...GTTTACAGGATCTTCTCTTAGAAATCTACAGAAGTATAGGGGAGCCAGATAGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000527805.6
ENST00000529588.5
ENST00000675595.1
CDS-3UTR TCA 90 bp CTCCTACTTCTGATAGTACATATTATTCTATTTGCAGCCTCTGTTCGATCCTCATATGGAAGTACAGTCTaGCAAAAGTCAGTTTTCACT +
Preference number: 4 (lower is better)
Translates to: LLLLIVHIILFAASVRSSYGSTV*QKSVFT
Trigger: AGTGAAAACTGACTTTTGTCAGACTGTACTTCCATA...TGAGGATCGAACAGAGGCTGCAAATAGAATAATATGTACTATCAGAAGTAGGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp GGGAAAGCTATTATCTCCCTTAATCTGGACACAACTGTTCAAGCAGTCTATAATGACTCCACAGCTAACTaGATTGTACTGTTTAATTTG +
Preference number: 4 (lower is better)
Translates to: GKAIISLNLDTTVQAVYNDSTAN*IVLFNL
Trigger: CAAATTAAACAGTACAATTCAGTTAGCTGTGGAGTC...ATTATAGACTGCTTGAACAGTTGTGTCCAGATTAAGGGAGATAATAGCTTTCCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp AACTATCTGGCTCCCCTATACTTCTGTAGATTTCTAAGAGAAGATCCTGTAAACGACTCCACAGCTAACTaGATTGTACTGTTTAATTTG +
Preference number: 4 (lower is better)
Translates to: NYLAPLYFCRFLREDPVNDSTAN*IVLFNL
Trigger: CAAATTAAACAGTACAATTCAGTTAGCTGTGGAGTC...GTTTACAGGATCTTCTCTTAGAAATCTACAGAAGTATAGGGGAGCCAGATAGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp AACTATCTGGCTCCCCTATACTTCTGTAGATTTCTAAGAGAAGATCCTGTAAACATGTACAAGTTCTGCTaGCTGCTCATTTATCAAGAT +
Preference number: 4 (lower is better)
Translates to: NYLAPLYFCRFLREDPVNMYKFC*LLIYQD
Trigger: ATCTTGATAAATGAGCAGTCAGCAGAACTTGTACAT...GTTTACAGGATCTTCTCTTAGAAATCTACAGAAGTATAGGGGAGCCAGATAGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp TGGTCCACCTTAATTTCCATAGTAGGGACAACAACATCTTCTAAATTCTTAAGTGTTAACAGAGTTTCCTaGGAGTTTCTCATCACTTCC +
Preference number: 4 (lower is better)
Translates to: WSTLISIVGTTTSSKFLSVNRVS*EFLITS
Trigger: GGAAGTGATGAGAAACTCTCAGGAAACTCTGTTAAC...ACTTAAGAATTTAGAAGATGTTGTTGTCCCTACTATGGAAATTAAGGTGGACCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp GAGATTATACTCACTAATACACGAGTCAGTAGTTTTACTTTCAGGTGGCTTTTTGAGATCAAATATGAATaGGTGCCTGCCATTGGCAAT +
Preference number: 4 (lower is better)
Translates to: EIILTNTRVSSFTFRWLFEIKYE*VPAIGN
Trigger: ATTGCCAATGGCAGGCACTCATTCATATTTGATCTC...AAAAAGCCACCTGAAAGTAAAACTACTGACTCGTGTATTAGTGAGTATAATCTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp ATAGACAGATACAGACAGAGTGCTTTCTTTGGTGAAGTTTCATTTCATGAGGAAAATATACTAAAGATTTaGCACTTCCCGGAAGAGGCA +
Preference number: 4 (lower is better)
Translates to: IDRYRQSAFFGEVSFHEENILKI*HFPEEA
Trigger: TGCCTCTTCCGGGAAGTGTCAAATCTTTAGTATATT...TTCCTCATGAAATGAAACTTCACCAAAGAAAGCACTCTGTCTGTATCTGTCTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530958.5
CDS-3UTR TCA 90 bp TACCTACTGAACCCAAATATGTCTGTATCACAGCACATTATGAACTCTGGTTTAGACATGTCATTTTGCTaGGCCAAAGGCTTAAAACAT +
Preference number: 4 (lower is better)
Translates to: YLLNPNMSVSQHIMNSGLDMSFC*AKGLKH
Trigger: ATGTTTTAAGCCTTTGGCTCAGCAAAATGACATGTC...TAAACCAGAGTTCATAATGTGCTGTGATACAGACATATTTGGGTTCAGTAGGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530958.5
CDS-3UTR GCA 90 bp CAGTGGTGTTTACAACGAATTGATCACAACCAGTTACAGATTTCTTTGTTCCTTAAACTACTGATTTCCTaGATCTTTTTCTGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: QWCLQRIDHNQLQISLFLKLLIS*IFFCLE
Trigger: CTCCAGGCAGAAAAAGATGCAGGAAATCAGTAGTTT...AAGGAACAAAGAAATCTGTAACTGGTTGTGATCAATTCGTTGTAAACACCACTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638443.1
CDS-3UTR GCA 90 bp GGGAAAGCTATTATCTCCCTTAATCTGGACACAACTGTTCAAGCAGTCTATAATCAACGTGTACATAGCTaGATCATATTTCTCAAGGAA +
Preference number: 4 (lower is better)
Translates to: GKAIISLNLDTTVQAVYNQRVHS*IIFLKE
Trigger: TTCCTTGAGAAATATGATGCAGCTATGTACACGTTG...ATTATAGACTGCTTGAACAGTTGTGTCCAGATTAAGGGAGATAATAGCTTTCCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR GCA 90 bp GGGAAAGCTATTATCTCCCTTAATCTGGACACAACTGTTCAAGCAGTCTATAATCAGGAAAAAGCCAGATaGAATCTTATTTGGACTCTT +
Preference number: 4 (lower is better)
Translates to: GKAIISLNLDTTVQAVYNQEKAR*NLIWTL
Trigger: AAGAGTCCAAATAAGATTGCATCTGGCTTTTTCCTG...ATTATAGACTGCTTGAACAGTTGTGTCCAGATTAAGGGAGATAATAGCTTTCCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR GCA 90 bp GGGAAAGCTATTATCTCCCTTAATCTGGACACAACTGTTCAAGCAGTCTATAATTCTCAGAGTCCATATTaGTTTGACCTAGGTTTTTCA +
Preference number: 4 (lower is better)
Translates to: GKAIISLNLDTTVQAVYNSQSPY*FDLGFS
Trigger: TGAAAAACCTAGGTCAAAGCAATATGGACTCTGAGA...ATTATAGACTGCTTGAACAGTTGTGTCCAGATTAAGGGAGATAATAGCTTTCCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR GCA 90 bp ATCTTCATTCCGTCTCTCTTCATCATGCCATTGACTTCAGAAACTCCAGAATTTATTATTTGTTTCAGCTaGTTGCTCACATATGGCAAG +
Preference number: 4 (lower is better)
Translates to: IFIPSLFIMPLTSETPEFIICFS*LLTYGK
Trigger: CTTGCCATATGTGAGCAAGCAGCTGAAACAAATAAT...AAATTCTGGAGTTTCTGAAGTCAATGGCATGATGAAGAGAGACGGAATGAAGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR GCA 90 bp GGGAAAGCTATTATCTCCCTTAATCTGGACACAACTGTTCAAGCAGTCTATAATGCCATCTTGGATAACTaGAACAAATTGACAACTAGT +
Preference number: 4 (lower is better)
Translates to: GKAIISLNLDTTVQAVYNAILDN*NKLTTS
Trigger: ACTAGTTGTCAATTTGTTGCAGTTATCCAAGATGGC...ATTATAGACTGCTTGAACAGTTGTGTCCAGATTAAGGGAGATAATAGCTTTCCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR GCA 90 bp GAGATTATACTCACTAATACACGAGTCAGTAGTTTTACTTTCAGGTGGCTTTTTCTGCATATTCCTCCATaGTGCTTGGTAATGAAGTTC +
Preference number: 4 (lower is better)
Translates to: EIILTNTRVSSFTFRWLFLHIPP*CLVMKF
Trigger: GAACTTCATTACCAAGCAGCATGGAGGAATATGCAG...AAAAAGCCACCTGAAAGTAAAACTACTGACTCGTGTATTAGTGAGTATAATCTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR GCA 90 bp GGGAAAGCTATTATCTCCCTTAATCTGGACACAACTGTTCAAGCAGTCTATAATACATATTATTCTATTTaGAGCCTCTGTTCGATCCTC +
Preference number: 4 (lower is better)
Translates to: GKAIISLNLDTTVQAVYNTYYSI*SLCSIL
Trigger: GAGGATCGAACAGAGGCTGCAAATAGAATAATATGT...ATTATAGACTGCTTGAACAGTTGTGTCCAGATTAAGGGAGATAATAGCTTTCCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR GCA 90 bp TCCTCTTTGGCTCTTTTCAGGAGAGCTTGCTTGTTTTCAAATTCCGATGATTTCACAAGTTCTGCTGACTaGTCATTTATCAAGATATTC +
Preference number: 4 (lower is better)
Translates to: SSLALFRRACLFSNSDDFTSSAD*SFIKIF
Trigger: GAATATCTTGATAAATGAGCAGTCAGCAGAACTTGT...GAAATCATCGGAATTTGAAAACAAGCAAGCTCTCCTGAAAAGAGCCAAAGAGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR GCA 90 bp ATTAGAATACTTGAACAGAACAGGAGCCTCATAGCATACCATGCAAGGCTAAAGACAAGTTCTGCTGACTaGTCATTTATCAAGATATTC +
Preference number: 4 (lower is better)
Translates to: IRILEQNRSLIAYHARLKTSSAD*SFIKIF
Trigger: GAATATCTTGATAAATGAGCAGTCAGCAGAACTTGT...CTTTAGCCTTGCATGGTATGCTATGAGGCTCCTGTTCTGTTCAAGTATTCTAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR GCA 90 bp ATTAGAATACTTGAACAGAACAGGAGCCTCATAGCATACCATGCAAGGCTAAAGTCAAATATGAATGAGTaGCTGCCATTGGCAATAAAA +
Preference number: 4 (lower is better)
Translates to: IRILEQNRSLIAYHARLKSNMNE*LPLAIK
Trigger: TTTTATTGCCAATGGCAGGCACTCATTCATATTTGA...CTTTAGCCTTGCATGGTATGCTATGAGGCTCCTGTTCTGTTCAAGTATTCTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR GCA 90 bp CTACTGAACCCAAATATGTCTGTATCACAGCACATTATGAACTCTGGTTTACTTTTAAGTATGTTTCTCTaGCCCGATTCAATCTCACAG +
Preference number: 4 (lower is better)
Translates to: LLNPNMSVSQHIMNSGLLLSMFL*PDSISQ
Trigger: CTGTGAGATTGAATCGGGGCAGAGAAACATACTTAA...AAGTAAACCAGAGTTCATAATGTGCTGTGATACAGACATATTTGGGTTCAGTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530958.5
CDS-3UTR CCA 90 bp TGGTCCACCTTAATTTCCATAGTAGGGACAACAACATCTTCTAAATTCTTAAGTCTTTTTCTTGGGTTTTaGCTCCTTTCGGATGATGGA +
Preference number: 4 (lower is better)
Translates to: WSTLISIVGTTTSSKFLSLFLGF*LLSDDG
Trigger: TCCATCATCCGAAAGGAGCCAAAACCCAAGAAAAAG...ACTTAAGAATTTAGAAGATGTTGTTGTCCCTACTATGGAAATTAAGGTGGACCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CCA 90 bp GAGATTATACTCACTAATACACGAGTCAGTAGTTTTACTTTCAGGTGGCTTTTTCATTTTTACCGTTCCTaGAACTATACTGGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: EIILTNTRVSSFTFRWLFHFYRS*NYTGGQ
Trigger: CTGACCACCAGTATAGTTCCAGGAACGGTAAAAATG...AAAAAGCCACCTGAAAGTAAAACTACTGACTCGTGTATTAGTGAGTATAATCTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CCA 90 bp CAAAATCTAACTACTCCTCATTTGTCCTTGGCAGTTTTCTATCTTAGTCATTTGCAGAGAAGCCAATACTaGACTGGTGCTTTTCTATAC +
Preference number: 4 (lower is better)
Translates to: QNLTTPHLSLAVFYLSHLQRSQY*TGAFLY
Trigger: GTATAGAAAAGCACCAGTCCAGTATTGGCTTCTCTG...CAAATGACTAAGATAGAAAACTGCCAAGGACAAATGAGGAGTAGTTAGATTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CCA 90 bp CACAGCCATACAAACTATCTGGCTCCCCTATACTTCTGTAGATTTCTAAGAGAAATTGCATTAGAGACTTaGCTTTCTGGAATAATTCTG +
Preference number: 4 (lower is better)
Translates to: HSHTNYLAPLYFCRFLREIALET*LSGIIL
Trigger: CAGAATTATTCCAGAAAGCCAAGTCTCTAATGCAAT...TTCTCTTAGAAATCTACAGAAGTATAGGGGAGCCAGATAGTTTGTATGGCTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CCA 90 bp TGGTCCACCTTAATTTCCATAGTAGGGACAACAACATCTTCTAAATTCTTAAGTTTCTCCACGGTCAAATaGCTTTTTGATGAAGGATGC +
Preference number: 4 (lower is better)
Translates to: WSTLISIVGTTTSSKFLSFSTVK*LFDEGC
Trigger: GCATCCTTCATCAAAAAGCCATTTGACCGTGGAGAA...ACTTAAGAATTTAGAAGATGTTGTTGTCCCTACTATGGAAATTAAGGTGGACCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CCA 90 bp ATTAGAATACTTGAACAGAACAGGAGCCTCATAGCATACCATGCAAGGCTAAAGACAAAGAACACACATTaGATAGTGGTTTCAGAAGTT +
Preference number: 4 (lower is better)
Translates to: IRILEQNRSLIAYHARLKTKNTH*IVVSEV
Trigger: AACTTCTGAAACCACTATCCAATGTGTGTTCTTTGT...CTTTAGCCTTGCATGGTATGCTATGAGGCTCCTGTTCTGTTCAAGTATTCTAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CCA 90 bp ATTAGAATACTTGAACAGAACAGGAGCCTCATAGCATACCATGCAAGGCTAAAGGTTTTACAAACATCTTaGTCACGACGATACAAAGAA +
Preference number: 4 (lower is better)
Translates to: IRILEQNRSLIAYHARLKVLQTS*SRRYKE
Trigger: TTCTTTGTATCGTCGTGACCAAGATGTTTGTAAAAC...CTTTAGCCTTGCATGGTATGCTATGAGGCTCCTGTTCTGTTCAAGTATTCTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CCA 90 bp TTTGTGGCTAAAATGTTTTTCAAACAGGTAACAGCTGCTGATCGAACTTTGACAGAGTCTTCCACTGAGTaGCATCTAAGTTTGCTAATA +
Preference number: 4 (lower is better)
Translates to: FVAKMFFKQVTAADRTLTESSTE*HLSLLI
Trigger: TATTAGCAAACTTAGATGCCACTCAGTGGAAGACTC...TGTCAAAGTTCGATCAGCAGCTGTTACCTGTTTGAAAAACATTTTAGCCACAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CCA 90 bp CTCCTACTTCTGATAGTACATATTATTCTATTTGCAGCCTCTGTTCGATCCTCAAATTGGCTGGTCTGCTaGAATATTTATGCCTTTTCT +
Preference number: 4 (lower is better)
Translates to: LLLLIVHIILFAASVRSSNWLVC*NIYAFS
Trigger: AGAAAAGGCATAAATATTCCAGCAGACCAGCCAATT...TGAGGATCGAACAGAGGCTGCAAATAGAATAATATGTACTATCAGAAGTAGGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CCA 90 bp GGGAAAGCTATTATCTCCCTTAATCTGGACACAACTGTTCAAGCAGTCTATAATAATTGGCTGGTCTGCTaGAATATTTATGCCTTTTCT +
Preference number: 4 (lower is better)
Translates to: GKAIISLNLDTTVQAVYNNWLVC*NIYAFS
Trigger: AGAAAAGGCATAAATATTCCAGCAGACCAGCCAATT...ATTATAGACTGCTTGAACAGTTGTGTCCAGATTAAGGGAGATAATAGCTTTCCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CCA 90 bp CACAGCCATACAAACTATCTGGCTCCCCTATACTTCTGTAGATTTCTAAGAGAAAGTTTAGTAATTGGCTaGTCTGCTGGAATATTTATG +
Preference number: 4 (lower is better)
Translates to: HSHTNYLAPLYFCRFLRESLVIG*SAGIFM
Trigger: CATAAATATTCCAGCAGACCAGCCAATTACTAAACT...TTCTCTTAGAAATCTACAGAAGTATAGGGGAGCCAGATAGTTTGTATGGCTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CCA 90 bp CAAAATCTAACTACTCCTCATTTGTCCTTGGCAGTTTTCTATCTTAGTCATTTGGAAGGACCTCTACAATaGTTAACAGAGTTTCCTGAG +
Preference number: 4 (lower is better)
Translates to: QNLTTPHLSLAVFYLSHLEGPLQ*LTEFPE
Trigger: CTCAGGAAACTCTGTTAACCATTGTAGAGGTCCTTC...CAAATGACTAAGATAGAAAACTGCCAAGGACAAATGAGGAGTAGTTAGATTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
3UTR CAA 72 bp TCTTGTAGTCTCATTAAGACACGTTCAGCTACTTTGTaGAAACTCTGGTCAATATCACTGAGATTTCGTTTG +
Preference number: 4 (lower is better)
Translates to: SCSLIKTRSATL*KLWSISLRFRL
Trigger: CAAACGAAATCTCAGTGATATTGACCAGAGTTTCAACAAAGTAGCTGAACGTGTCTTAATGAGACTACAAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
3UTR CAA 72 bp TTCTCTTGTAGTCTCATTAAGACACGTTCAGCTACTTaGTTGAAACTCTGGTCAATATCACTGAGATTTCGT +
Preference number: 4 (lower is better)
Translates to: FSCSLIKTRSAT*LKLWSISLRFR
Trigger: ACGAAATCTCAGTGATATTGACCAGAGTTTCAACAAAGTAGCTGAACGTGTCTTAATGAGACTACAAGAGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp GAGATTATACTCACTAATACACGAGTCAGTAGTTTTACTTTCAGGTGGCTTTTTTCTAACCACTGTTGCTaGGATATTTCACACCAGTAT +
Preference number: 4 (lower is better)
Translates to: EIILTNTRVSSFTFRWLFSNHCC*DISHQY
Trigger: ATACTGGTGTGAAATATCTCAGCAACAGTGGTTAGA...AAAAAGCCACCTGAAAGTAAAACTACTGACTCGTGTATTAGTGAGTATAATCTC
37% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp TGGTCCACCTTAATTTCCATAGTAGGGACAACAACATCTTCTAAATTCTTAAGTTGTTGGGGTAGAAGCTaGGATAGTATCATCAGTAAT +
Preference number: 4 (lower is better)
Translates to: WSTLISIVGTTTSSKFLSCWGRS*DSIISN
Trigger: ATTACTGATGATACTATCTCAGCTTCTACCCCAACA...ACTTAAGAATTTAGAAGATGTTGTTGTCCCTACTATGGAAATTAAGGTGGACCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR TCA 90 bp CAAAATCTAACTACTCCTCATTTGTCCTTGGCAGTTTTCTATCTTAGTCATTTGTCTCTCATTCCTTCCTaGGCTTTCAAGTATGCATTT +
Preference number: 4 (lower is better)
Translates to: QNLTTPHLSLAVFYLSHLSLIPS*AFKYAF
Trigger: AAATGCATACTTGAAAGCTCAGGAAGGAATGAGAGA...CAAATGACTAAGATAGAAAACTGCCAAGGACAAATGAGGAGTAGTTAGATTTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp GAGATTATACTCACTAATACACGAGTCAGTAGTTTTACTTTCAGGTGGCTTTTTTCAATTCTTTGGTATTaGGTATCTGAAAACCGGGCT +
Preference number: 4 (lower is better)
Translates to: EIILTNTRVSSFTFRWLFSILWY*VSENRA
Trigger: AGCCCGGTTTTCAGATACTCAATACCAAAGAATTGA...AAAAAGCCACCTGAAAGTAAAACTACTGACTCGTGTATTAGTGAGTATAATCTC
37% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp CAAAATCTAACTACTCCTCATTTGTCCTTGGCAGTTTTCTATCTTAGTCATTTGTCAATTCTTTGGTATTaGGTATCTGAAAACCGGGCT +
Preference number: 4 (lower is better)
Translates to: QNLTTPHLSLAVFYLSHLSILWY*VSENRA
Trigger: AGCCCGGTTTTCAGATACTCAATACCAAAGAATTGA...CAAATGACTAAGATAGAAAACTGCCAAGGACAAATGAGGAGTAGTTAGATTTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp TACCTACTGAACCCAAATATGTCTGTATCACAGCACATTATGAACTCTGGTTTAATTAGCAGATGGCTCTaGTTCTCTTCTCCTTTTATA +
Preference number: 4 (lower is better)
Translates to: YLLNPNMSVSQHIMNSGLISRWL*FSSPFI
Trigger: TATAAAAGGAGAAGAGAATCAGAGCCATCTGCTAAT...TAAACCAGAGTTCATAATGTGCTGTGATACAGACATATTTGGGTTCAGTAGGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530958.5
CDS-3UTR TCA 90 bp ATAGACAGATACAGACAGAGTGCTTTCTTTGGTGAAGTTTCATTTCATGAGGAATCTTTTGGGGGCTTCTaGTATAATCAAACTCTCTTT +
Preference number: 4 (lower is better)
Translates to: IDRYRQSAFFGEVSFHEESFGGF*YNQTLF
Trigger: AAAGAGAGTTTGATTATATCAGAAGCCCCCAAAAGA...TTCCTCATGAAATGAAACTTCACCAAAGAAAGCACTCTGTCTGTATCTGTCTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530958.5
CDS-3UTR TCA 90 bp TACCTACTGAACCCAAATATGTCTGTATCACAGCACATTATGAACTCTGGTTTATTGAGACATGAAAGATaGATAGAAAACAGCCAGGTA +
Preference number: 4 (lower is better)
Translates to: YLLNPNMSVSQHIMNSGLLRHER*IENSQV
Trigger: TACCTGGCTGTTTTCTATTCATCTTTCATGTCTCAA...TAAACCAGAGTTCATAATGTGCTGTGATACAGACATATTTGGGTTCAGTAGGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530958.5
CDS-3UTR TCA 90 bp CAGTGGTGTTTACAACGAATTGATCACAACCAGTTACAGATTTCTTTGTTCCTTGACAGACAATTAAAGTaGAGAATATTCAGAGGAGAG +
Preference number: 4 (lower is better)
Translates to: QWCLQRIDHNQLQISLFLDRQLK*RIFRGE
Trigger: CTCTCCTCTGAATATTCTTCACTTTAATTGTCTGTC...AAGGAACAAAGAAATCTGTAACTGGTTGTGATCAATTCGTTGTAAACACCACTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638443.1
CDS-3UTR GCA 90 bp CAAAATCTAACTACTCCTCATTTGTCCTTGGCAGTTTTCTATCTTAGTCATTTGAAACTACTGATTTCCTaGATCTTTTTCTGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: QNLTTPHLSLAVFYLSHLKLLIS*IFFCLE
Trigger: CTCCAGGCAGAAAAAGATGCAGGAAATCAGTAGTTT...CAAATGACTAAGATAGAAAACTGCCAAGGACAAATGAGGAGTAGTTAGATTTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR GCA 90 bp CAAAATCTAACTACTCCTCATTTGTCCTTGGCAGTTTTCTATCTTAGTCATTTGCCAATACTGGACTGGTaGTTTTCTATACCACATTCT +
Preference number: 4 (lower is better)
Translates to: QNLTTPHLSLAVFYLSHLPILDW*FSIPHS
Trigger: AGAATGTGGTATAGAAAAGCACCAGTCCAGTATTGG...CAAATGACTAAGATAGAAAACTGCCAAGGACAAATGAGGAGTAGTTAGATTTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR GCA 90 bp CAAAATCTAACTACTCCTCATTTGTCCTTGGCAGTTTTCTATCTTAGTCATTTGTCTTCTTGGTACAGTTaGTCAAGCAACGTGTACATA +
Preference number: 4 (lower is better)
Translates to: QNLTTPHLSLAVFYLSHLSSWYS*SSNVYI
Trigger: TATGTACACGTTGCTTGAGCAACTGTACCAAGAAGA...CAAATGACTAAGATAGAAAACTGCCAAGGACAAATGAGGAGTAGTTAGATTTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR GCA 90 bp TCGAACTTTGACACAATCTTCTACCAGTGTGTTATTCAGGTAGGTCAGCATTATTTTAATTTGAAATATTaGCCTTTCAGGGAGCTGAGT +
Preference number: 4 (lower is better)
Translates to: SNFDTIFYQCVIQVGQHYFNLKY*PFRELS
Trigger: ACTCAGCTCCCTGAAAGGGCAATATTTCAAATTAAA...ATAATGCTGACCTACCTGAATAACACACTGGTAGAAGATTGTGTCAAAGTTCGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR GCA 90 bp GAGATTATACTCACTAATACACGAGTCAGTAGTTTTACTTTCAGGTGGCTTTTTCTGCTGGAATATTTATaGCTTTTCTCTGAGTCTTCC +
Preference number: 4 (lower is better)
Translates to: EIILTNTRVSSFTFRWLFLLEYL*LFSESS
Trigger: GGAAGACTCAGAGAAAAGGCATAAATATTCCAGCAG...AAAAAGCCACCTGAAAGTAAAACTACTGACTCGTGTATTAGTGAGTATAATCTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR GCA 90 bp TACCTACTGAACCCAAATATGTCTGTATCACAGCACATTATGAACTCTGGTTTAATGAAGCAAATTCTATaGTATGGTGGTATCCTTTGC +
Preference number: 4 (lower is better)
Translates to: YLLNPNMSVSQHIMNSGLMKQIL*YGGILC
Trigger: GCAAAGGATACCACCATAGCATAGAATTTGCTTCAT...TAAACCAGAGTTCATAATGTGCTGTGATACAGACATATTTGGGTTCAGTAGGTA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530958.5
CDS-3UTR GCA 90 bp CTACTGAACCCAAATATGTCTGTATCACAGCACATTATGAACTCTGGTTTACTTAATGTTTGCCTTGCTTaGAGTAGTAGCAGGATTAAA +
Preference number: 4 (lower is better)
Translates to: LLNPNMSVSQHIMNSGLLNVCLA*SSSRIK
Trigger: TTTAATCCTGCTACTACTGCAAGCAAGGCAAACATT...AAGTAAACCAGAGTTCATAATGTGCTGTGATACAGACATATTTGGGTTCAGTAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530958.5
CDS-3UTR CCA 90 bp CAAAATCTAACTACTCCTCATTTGTCCTTGGCAGTTTTCTATCTTAGTCATTTGAACTACCCTGAATTATaGCTCCAAGTAAGCCAAAGT +
Preference number: 4 (lower is better)
Translates to: QNLTTPHLSLAVFYLSHLNYPEL*LQVSQS
Trigger: ACTTTGGCTTACTTGGAGCCATAATTCAGGGTAGTT...CAAATGACTAAGATAGAAAACTGCCAAGGACAAATGAGGAGTAGTTAGATTTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CCA 90 bp TGGTCCACCTTAATTTCCATAGTAGGGACAACAACATCTTCTAAATTCTTAAGTTCTTTATCTTTTTGGTaGTGTTCACATTCTGGCACG +
Preference number: 4 (lower is better)
Translates to: WSTLISIVGTTTSSKFLSSLSFW*CSHSGT
Trigger: CGTGCCAGAATGTGAACACCACCAAAAAGATAAAGA...ACTTAAGAATTTAGAAGATGTTGTTGTCCCTACTATGGAAATTAAGGTGGACCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CCA 90 bp GGGAAAGCTATTATCTCCCTTAATCTGGACACAACTGTTCAAGCAGTCTATAATATTGCATTAGAGACTTaGCTTTCTGGAATAATTCTG +
Preference number: 4 (lower is better)
Translates to: GKAIISLNLDTTVQAVYNIALET*LSGIIL
Trigger: CAGAATTATTCCAGAAAGCCAAGTCTCTAATGCAAT...ATTATAGACTGCTTGAACAGTTGTGTCCAGATTAAGGGAGATAATAGCTTTCCC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CCA 90 bp CTTTATGTAGTTCCAGTTGTCTTCGAAGATCCTTTAGTCCTTCAAGTCTTGTCATTCAAGTCTTGTCAATaGAAGTGCATCATAAACACT +
Preference number: 4 (lower is better)
Translates to: LYVVPVVFEDPLVLQVLSFKSCQ*KCIINT
Trigger: AGTGTTTATGATGCACTTCCATTGACAAGACTTGAA...TGACAAGACTTGAAGGACTAAAGGATCTTCGAAGACAACTGGAACTACATAAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531525.2
CDS-3UTR CCA 90 bp GAGATTATACTCACTAATACACGAGTCAGTAGTTTTACTTTCAGGTGGCTTTTTCTTTCAAAGGATTCATaGTCCAGTCAAAGAGTGGAT +
Preference number: 4 (lower is better)
Translates to: EIILTNTRVSSFTFRWLFLSKDS*SSQRVD
Trigger: ATCCACTCTTTGACTGGACCATGAATCCTTTGAAAG...AAAAAGCCACCTGAAAGTAAAACTACTGACTCGTGTATTAGTGAGTATAATCTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CCA 90 bp GAGATTATACTCACTAATACACGAGTCAGTAGTTTTACTTTCAGGTGGCTTTTTCTCCTCATTTGTCCTTaGCAGTTTTCTATCTTAGTC +
Preference number: 4 (lower is better)
Translates to: EIILTNTRVSSFTFRWLFLLICP*QFSILV
Trigger: GACTAAGATAGAAAACTGCCAAGGACAAATGAGGAG...AAAAAGCCACCTGAAAGTAAAACTACTGACTCGTGTATTAGTGAGTATAATCTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CCA 90 bp CAAAATCTAACTACTCCTCATTTGTCCTTGGCAGTTTTCTATCTTAGTCATTTGCTCCTCATTTGTCCTTaGCAGTTTTCTATCTTAGTC +
Preference number: 4 (lower is better)
Translates to: QNLTTPHLSLAVFYLSHLLLICP*QFSILV
Trigger: GACTAAGATAGAAAACTGCCAAGGACAAATGAGGAG...CAAATGACTAAGATAGAAAACTGCCAAGGACAAATGAGGAGTAGTTAGATTTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CCA 90 bp ATAGACAGATACAGACAGAGTGCTTTCTTTGGTGAAGTTTCATTTCATGAGGAAACAGAATCTCAAAATTaGGAGGAACTAAAAGACCAG +
Preference number: 4 (lower is better)
Translates to: IDRYRQSAFFGEVSFHEETESQN*EELKDQ
Trigger: CTGGTCTTTTAGTTCCTCCCAATTTTGAGATTCTGT...TTCCTCATGAAATGAAACTTCACCAAAGAAAGCACTCTGTCTGTATCTGTCTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530958.5
CDS-3UTR CCA 90 bp TACCTACTGAACCCAAATATGTCTGTATCACAGCACATTATGAACTCTGGTTTAAACAGCATTTCAACATaGACACAAAGATGGGAAGAA +
Preference number: 4 (lower is better)
Translates to: YLLNPNMSVSQHIMNSGLNSIST*TQRWEE
Trigger: TTCTTCCCATCTTTGTGTCCATGTTGAAATGCTGTT...TAAACCAGAGTTCATAATGTGCTGTGATACAGACATATTTGGGTTCAGTAGGTA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530958.5
CDS-3UTR TCA 90 bp CAAAATCTAACTACTCCTCATTTGTCCTTGGCAGTTTTCTATCTTAGTCATTTGTTCACCTCATCAAAATaGCTTCTAATCACCAGATGT +
Preference number: 4 (lower is better)
Translates to: QNLTTPHLSLAVFYLSHLFTSSK*LLITRC
Trigger: ACATCTGGTGATTAGAAGTCATTTTGATGAGGTGAA...CAAATGACTAAGATAGAAAACTGCCAAGGACAAATGAGGAGTAGTTAGATTTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp GAGATTATACTCACTAATACACGAGTCAGTAGTTTTACTTTCAGGTGGCTTTTTTTCACCTCATCAAAATaGCTTCTAATCACCAGATGT +
Preference number: 4 (lower is better)
Translates to: EIILTNTRVSSFTFRWLFFTSSK*LLITRC
Trigger: ACATCTGGTGATTAGAAGTCATTTTGATGAGGTGAA...AAAAAGCCACCTGAAAGTAAAACTACTGACTCGTGTATTAGTGAGTATAATCTC
36% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp CAAAATCTAACTACTCCTCATTTGTCCTTGGCAGTTTTCTATCTTAGTCATTTGAAGCAGATTTCTCCATaGTTCATTTGTATCTTGGAG +
Preference number: 4 (lower is better)
Translates to: QNLTTPHLSLAVFYLSHLKQISP*FICILE
Trigger: CTCCAAGATACAAATGAATCATGGAGAAATCTGCTT...CAAATGACTAAGATAGAAAACTGCCAAGGACAAATGAGGAGTAGTTAGATTTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp GAGATTATACTCACTAATACACGAGTCAGTAGTTTTACTTTCAGGTGGCTTTTTTCTGGTCAATATCACTaGGATTTCGTTTGCATTCTT +
Preference number: 4 (lower is better)
Translates to: EIILTNTRVSSFTFRWLFSGQYH*DFVCIL
Trigger: AAGAATGCAAACGAAATCTCAGTGATATTGACCAGA...AAAAAGCCACCTGAAAGTAAAACTACTGACTCGTGTATTAGTGAGTATAATCTC
36% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR TCA 90 bp CAAAATCTAACTACTCCTCATTTGTCCTTGGCAGTTTTCTATCTTAGTCATTTGCATAATATGGGTCAGTaGCTTAGCATACAACAACTA +
Preference number: 4 (lower is better)
Translates to: QNLTTPHLSLAVFYLSHLHNMGQ*LSIQQL
Trigger: TAGTTGTTGTATGCTAAGTCACTGACCCATATTATG...CAAATGACTAAGATAGAAAACTGCCAAGGACAAATGAGGAGTAGTTAGATTTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR GCA 90 bp GAGATTATACTCACTAATACACGAGTCAGTAGTTTTACTTTCAGGTGGCTTTTTATTATTTGTTTCAGCTaGTTGCTCACATATGGCAAG +
Preference number: 4 (lower is better)
Translates to: EIILTNTRVSSFTFRWLFIICFS*LLTYGK
Trigger: CTTGCCATATGTGAGCAAGCAGCTGAAACAAATAAT...AAAAAGCCACCTGAAAGTAAAACTACTGACTCGTGTATTAGTGAGTATAATCTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR GCA 90 bp GAGATTATACTCACTAATACACGAGTCAGTAGTTTTACTTTCAGGTGGCTTTTTACATATTATTCTATTTaGAGCCTCTGTTCGATCCTC +
Preference number: 4 (lower is better)
Translates to: EIILTNTRVSSFTFRWLFTYYSI*SLCSIL
Trigger: GAGGATCGAACAGAGGCTGCAAATAGAATAATATGT...AAAAAGCCACCTGAAAGTAAAACTACTGACTCGTGTATTAGTGAGTATAATCTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR GCA 90 bp GAGATTATACTCACTAATACACGAGTCAGTAGTTTTACTTTCAGGTGGCTTTTTCCAAGAATTTTTCCATaGAGAAGTAACGGAAAACTG +
Preference number: 4 (lower is better)
Translates to: EIILTNTRVSSFTFRWLFPRIFP*RSNGKL
Trigger: CAGTTTTCCGTTACTTCTGCATGGAAAAATTCTTGG...AAAAAGCCACCTGAAAGTAAAACTACTGACTCGTGTATTAGTGAGTATAATCTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR GCA 90 bp CTACTGAACCCAAATATGTCTGTATCACAGCACATTATGAACTCTGGTTTACTTTACATAAACAGAAGATaGTCATTCACTGATAGATGC +
Preference number: 4 (lower is better)
Translates to: LLNPNMSVSQHIMNSGLLYINRR*SFTDRC
Trigger: GCATCTATCAGTGAATGAGCATCTTCTGTTTATGTA...AAGTAAACCAGAGTTCATAATGTGCTGTGATACAGACATATTTGGGTTCAGTAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530958.5
CDS-3UTR GCA 90 bp TACCTACTGAACCCAAATATGTCTGTATCACAGCACATTATGAACTCTGGTTTAACTTCCGCTTTACTCTaGTATAGATTACAGATTGTT +
Preference number: 4 (lower is better)
Translates to: YLLNPNMSVSQHIMNSGLTSALL*YRLQIV
Trigger: AACAATCTGTAATCTATAGCAGAGTAAAGCGGAAGT...TAAACCAGAGTTCATAATGTGCTGTGATACAGACATATTTGGGTTCAGTAGGTA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530958.5
CDS-3UTR CCA 90 bp TGGTCCACCTTAATTTCCATAGTAGGGACAACAACATCTTCTAAATTCTTAAGTAATGTATTACACATCTaGAAGACCTGTTGCATGACA +
Preference number: 4 (lower is better)
Translates to: WSTLISIVGTTTSSKFLSNVLHI*KTCCMT
Trigger: TGTCATGCAACAGGTCTTCCAGATGTGTAATACATT...ACTTAAGAATTTAGAAGATGTTGTTGTCCCTACTATGGAAATTAAGGTGGACCA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR GCA 90 bp CAAAATCTAACTACTCCTCATTTGTCCTTGGCAGTTTTCTATCTTAGTCATTTGCTGGTGACAGATATCTaGCATCAATTCAATCAAATT +
Preference number: 4 (lower is better)
Translates to: QNLTTPHLSLAVFYLSHLLVTDI*HQFNQI
Trigger: AATTTGATTGAATTGATGGCAGATATCTGTCACCAG...CAAATGACTAAGATAGAAAACTGCCAAGGACAAATGAGGAGTAGTTAGATTTTG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CCA 90 bp GAGATTATACTCACTAATACACGAGTCAGTAGTTTTACTTTCAGGTGGCTTTTTCACATTCTCTCACAATaGTTAAAAAGTCCATCTTGT +
Preference number: 4 (lower is better)
Translates to: EIILTNTRVSSFTFRWLFHILSQ*LKSPSC
Trigger: ACAAGATGGACTTTTTAACCATTGTGAGAGAATGTG...AAAAAGCCACCTGAAAGTAAAACTACTGACTCGTGTATTAGTGAGTATAATCTC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CCA 90 bp CAAAATCTAACTACTCCTCATTTGTCCTTGGCAGTTTTCTATCTTAGTCATTTGATTGCATTAGAGACTTaGCTTTCTGGAATAATTCTG +
Preference number: 4 (lower is better)
Translates to: QNLTTPHLSLAVFYLSHLIALET*LSGIIL
Trigger: CAGAATTATTCCAGAAAGCCAAGTCTCTAATGCAAT...CAAATGACTAAGATAGAAAACTGCCAAGGACAAATGAGGAGTAGTTAGATTTTG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CCA 90 bp TGGTCCACCTTAATTTCCATAGTAGGGACAACAACATCTTCTAAATTCTTAAGTAGATGCAATCTTATTTaGACTCTTCTTGGTACAGTT +
Preference number: 4 (lower is better)
Translates to: WSTLISIVGTTTSSKFLSRCNLI*TLLGTV
Trigger: AACTGTACCAAGAAGAGTCCAAATAAGATTGCATCT...ACTTAAGAATTTAGAAGATGTTGTTGTCCCTACTATGGAAATTAAGGTGGACCA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CCA 90 bp CAAAATCTAACTACTCCTCATTTGTCCTTGGCAGTTTTCTATCTTAGTCATTTGAGATGCAATCTTATTTaGACTCTTCTTGGTACAGTT +
Preference number: 4 (lower is better)
Translates to: QNLTTPHLSLAVFYLSHLRCNLI*TLLGTV
Trigger: AACTGTACCAAGAAGAGTCCAAATAAGATTGCATCT...CAAATGACTAAGATAGAAAACTGCCAAGGACAAATGAGGAGTAGTTAGATTTTG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CCA 90 bp GAGATTATACTCACTAATACACGAGTCAGTAGTTTTACTTTCAGGTGGCTTTTTACAAAGAACACACATTaGATAGTGGTTTCAGAAGTT +
Preference number: 4 (lower is better)
Translates to: EIILTNTRVSSFTFRWLFTKNTH*IVVSEV
Trigger: AACTTCTGAAACCACTATCCAATGTGTGTTCTTTGT...AAAAAGCCACCTGAAAGTAAAACTACTGACTCGTGTATTAGTGAGTATAATCTC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS GCA 90 bp CCACTGCACTCGGAAGGTCAAAGTAGTATCAACCGCGGCGGTGGCTaGAGCGCAGATCCCGACTCCTCTCGCCTCCTCCCGCGGCCACGG +
Preference number: 5 (lower is better)
Translates to: PLHSEGQSSINRGGG*SADPDSSRLLPRPR
Trigger: CCGTGGCCGCGGGAGGAGGCGAGAGGAGTCGGGATCTGCGCTGCAGCCACCGCCGCGGTTGATACTACTTTGACCTTCCGAGTGCAGTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000683468.1
ENST00000683488.1
CDS GCA 90 bp TCACTGCACTCGGAAGGTCAAAGTAGTATCAACCGCGGCGGTGGCTaGAGCGCAGATCCCGACTCCTCTCGCCTCCTCCCGCGGCCACGG +
Preference number: 5 (lower is better)
Translates to: SLHSEGQSSINRGGG*SADPDSSRLLPRPR
Trigger: CCGTGGCCGCGGGAGGAGGCGAGAGGAGTCGGGATCTGCGCTGCAGCCACCGCCGCGGTTGATACTACTTTGACCTTCCGAGTGCAGTGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527805.6
ENST00000675595.1
ENST00000675843.1
ENST00000683174.1
CDS GCA 90 bp ACACTGCACTCGGAAGGTCAAAGTAGTATCAACCGCGGCGGTGGCTaGAGCGCAGATCCCGACTCCTCTCGCCTCCTCCCGCGGCCACGG +
Preference number: 5 (lower is better)
Translates to: TLHSEGQSSINRGGG*SADPDSSRLLPRPR
Trigger: CCGTGGCCGCGGGAGGAGGCGAGAGGAGTCGGGATCTGCGCTGCAGCCACCGCCGCGGTTGATACTACTTTGACCTTCCGAGTGCAGTGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532931.5
CDS GCA 90 bp TTTCCCAGCGCAGAAGCCGCTGCGTTGCCTCCGCGCCCCTACCACTaGACTCGGAAGGTCAAAGTAGTATCAACCGCGGCGGTGGCTGCA +
Preference number: 5 (lower is better)
Translates to: FPSAEAAALPPRPYH*TRKVKVVSTAAVAA
Trigger: TGCAGCCACCGCCGCGGTTGATACTACTTTGACCTTCCGAGTGCAGTGGTAGGGGCGCGGAGGCAACGCAGCGGCTTCTGCGCTGGGAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000530958.5
ENST00000683468.1
ENST00000683488.1
CDS GCA 90 bp AGATGGAGTGAGGAGAGGGAGGAGTCAAGGGCCACTCTGGAGGGGTaGATGAGATTGGCGGTCTGGGGAGAGGACAGACTGGGTCGCACA +
Preference number: 5 (lower is better)
Translates to: RWSEEREESRATLEG*MRLAVWGEDRLGRT
Trigger: TGTGCGACCCAGTCTGTCCTCTCCCCAGACCGCCAATCTCATGCACCCCTCCAGAGTGGCCCTTGACTCCTCCCTCTCCTCACTCCATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000530958.5
ENST00000683468.1
ENST00000683488.1
CDS CCA 90 bp CAGGAGGCAGGGTTCAATTCAGGGCGTTTAAAAGGAGGAGGTTATTaGCCAAGTCCGCTAAGCACCCGGAGAGAGGCCAGGAAAGATGGA +
Preference number: 5 (lower is better)
Translates to: QEAGFNSGRLKGGGY*PSPLSTRREARKDG
Trigger: TCCATCTTTCCTGGCCTCTCTCCGGGTGCTTAGCGGACTTGGCCAATAACCTCCTCCTTTTAAACGCCCTGAATTGAACCCTGCCTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000530958.5
ENST00000683468.1
ENST00000683488.1
CDS-3UTR CAA 90 bp AGGCAGGCAGTGGGAATTAAATGTACCTCCTTCCACCCCTGCCATAAAGGTGGGTGCAGGTGGAGGGATTaGGTAGGTTCTAGCGTGCTA +
Preference number: 5 (lower is better)
Translates to: RQAVGIKCTSFHPCHKGGCRWRD*VGSSVL
Trigger: TAGCACGCTAGAACCTACCAAATCCCTCCACCTGCA...CCCACCTTTATGGCAGGGGTGGAAGGAGGTACATTTAATTCCCACTGCCTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp GATCTTGAGAAAAGCTCCCCAATGCTTTCCAGCTCTCCAATGGCCTGCAACCTGGGTAGCAGTCTCTCTTaGCTGTGCCATCCCACTGTC +
Preference number: 5 (lower is better)
Translates to: DLEKSSPMLSSSPMACNLGSSLS*LCHPTV
Trigger: GACAGTGGGATGGCACAGCAAAGAGAGACTGCTACC...CAGGTTGCAGGCCATTGGAGAGCTGGAAAGCATTGGGGAGCTTTTCTCAAGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp TCTTTGCTGACGGAAGTGCAATGGTCCCACTGCATATTCCTCCATGCTGCTTGGGGTAGCAGTCTCTCTTaGCTGTGCCATCCCACTGTC +
Preference number: 5 (lower is better)
Translates to: SLLTEVQWSHCIFLHAAWGSSLS*LCHPTV
Trigger: GACAGTGGGATGGCACAGCAAAGAGAGACTGCTACC...CCAAGCAGCATGGAGGAATATGCAGTGGGACCATTGCACTTCCGTCAGCAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp AGGCAGGCAGTGGGAATTAAATGTACCTCCTTCCACCCCTGCCATAAAGGTGGGGAGGAGGAAGTGTGTTaGCCTTGGCCTGGGAAATCT +
Preference number: 5 (lower is better)
Translates to: RQAVGIKCTSFHPCHKGGEEEVC*PWPGKS
Trigger: AGATTTCCCAGGCCAAGGCAAACACACTTCCTCCTC...CCCACCTTTATGGCAGGGGTGGAAGGAGGTACATTTAATTCCCACTGCCTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp AGGCAGGCAGTGGGAATTAAATGTACCTCCTTCCACCCCTGCCATAAAGGTGGGCGATCCAGTGATTCCTaGAGATTCTGGTGGACAGAG +
Preference number: 5 (lower is better)
Translates to: RQAVGIKCTSFHPCHKGGRSSDS*RFWWTE
Trigger: CTCTGTCCACCAGAATCTCAAGGAATCACTGGATCG...CCCACCTTTATGGCAGGGGTGGAAGGAGGTACATTTAATTCCCACTGCCTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp CAGGCAGTGGGAATTAAATGTACCTCCTTCCACCCCTGCCATAAAGGTGGGACATGTGGATCGGCTCGTTaGCGAGAAGTGTCGAAGACA +
Preference number: 5 (lower is better)
Translates to: QAVGIKCTSFHPCHKGGTCGSAR*REVSKT
Trigger: TGTCTTCGACACTTCTCGCAAACGAGCCGATCCACA...TGTCCCACCTTTATGGCAGGGGTGGAAGGAGGTACATTTAATTCCCACTGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp TCTTCCCTCCACCACAGCCATACAAACTATCTGGCTCCCCTATACTTCTGTAGACCAAGTTTGCAGGGGTaGTGGATCGGCTCGTTTGCG +
Preference number: 5 (lower is better)
Translates to: SSLHHSHTNYLAPLYFCRPSLQG*WIGSFA
Trigger: CGCAAACGAGCCGATCCACAACCCCTGCAAACTTGG...TCTACAGAAGTATAGGGGAGCCAGATAGTTTGTATGGCTGTGGTGGAGGGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000527805.6
ENST00000529588.5
ENST00000675595.1
CDS-3UTR CAA 90 bp GATCTTGAGAAAAGCTCCCCAATGCTTTCCAGCTCTCCAATGGCCTGCAACCTGTTGCATGACAGCATCTaGTCTCAGGTCATCACGGCC +
Preference number: 5 (lower is better)
Translates to: DLEKSSPMLSSSPMACNLLHDSI*SQVITA
Trigger: GGCCGTGATGACCTGAGACAAGATGCTGTCATGCAA...CAGGTTGCAGGCCATTGGAGAGCTGGAAAGCATTGGGGAGCTTTTCTCAAGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp CAGGCAGTGGGAATTAAATGTACCTCCTTCCACCCCTGCCATAAAGGTGGGACAAGTCGGCTGAGATTTTaGGGGTCTATGGCCTGCTGT +
Preference number: 5 (lower is better)
Translates to: QAVGIKCTSFHPCHKGGTSRLRF*GSMACC
Trigger: ACAGCAGGCCATAGACCCCAAAAATCTCAGCCGACT...TGTCCCACCTTTATGGCAGGGGTGGAAGGAGGTACATTTAATTCCCACTGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp AGGCAGGCAGTGGGAATTAAATGTACCTCCTTCCACCCCTGCCATAAAGGTGGGGGAAGTGTGTTTGCCTaGGCCTGGGAAATCTCCTAT +
Preference number: 5 (lower is better)
Translates to: RQAVGIKCTSFHPCHKGGGSVFA*AWEISY
Trigger: ATAGGAGATTTCCCAGGCCAAGGCAAACACACTTCC...CCCACCTTTATGGCAGGGGTGGAAGGAGGTACATTTAATTCCCACTGCCTGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp AGGCAGGCAGTGGGAATTAAATGTACCTCCTTCCACCCCTGCCATAAAGGTGGGAGCTCAATCACCCATTaGTTAATCTCCGCAGCTGGG +
Preference number: 5 (lower is better)
Translates to: RQAVGIKCTSFHPCHKGGSSITH*LISAAG
Trigger: CCCAGCTGCGGAGATTAACAAATGGGTGATTGAGCT...CCCACCTTTATGGCAGGGGTGGAAGGAGGTACATTTAATTCCCACTGCCTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp TCTTTGCTGACGGAAGTGCAATGGTCCCACTGCATATTCCTCCATGCTGCTTGGCGATCCAGTGATTCCTaGAGATTCTGGTGGACAGAG +
Preference number: 5 (lower is better)
Translates to: SLLTEVQWSHCIFLHAAWRSSDS*RFWWTE
Trigger: CTCTGTCCACCAGAATCTCAAGGAATCACTGGATCG...CCAAGCAGCATGGAGGAATATGCAGTGGGACCATTGCACTTCCGTCAGCAAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp CTAAGCACGTTTCTGCTAACCAGTTGCCACAAACCCTCAGACATTCTGTGTATGCCAAGTTTGCAGGGGTaGTGGATCGGCTCGTTTGCG +
Preference number: 5 (lower is better)
Translates to: LSTFLLTSCHKPSDILCMPSLQG*WIGSFA
Trigger: CGCAAACGAGCCGATCCACAACCCCTGCAAACTTGG...CATACACAGAATGTCTGAGGGTTTGTGGCAACTGGTTAGCAGAAACGTGCTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp GATCTTGAGAAAAGCTCCCCAATGCTTTCCAGCTCTCCAATGGCCTGCAACCTGGGGCTTTGCCCCACATaGCTTCGTGTTCATATGTTC +
Preference number: 5 (lower is better)
Translates to: DLEKSSPMLSSSPMACNLGLCPT*LRVHMF
Trigger: GAACATATGAACACGAAGCAATGTGGGGCAAAGCCC...CAGGTTGCAGGCCATTGGAGAGCTGGAAAGCATTGGGGAGCTTTTCTCAAGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp AGGCAGGCAGTGGGAATTAAATGTACCTCCTTCCACCCCTGCCATAAAGGTGGGTATGTTACTAGGGCTTaGCCCCACATTGCTTCGTGT +
Preference number: 5 (lower is better)
Translates to: RQAVGIKCTSFHPCHKGGYVTRA*PHIASC
Trigger: ACACGAAGCAATGTGGGGCAAAGCCCTAGTAACATA...CCCACCTTTATGGCAGGGGTGGAAGGAGGTACATTTAATTCCCACTGCCTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp CAGGCAGTGGGAATTAAATGTACCTCCTTCCACCCCTGCCATAAAGGTGGGACAAGCTCAATCACCCATTaGTTAATCTCCGCAGCTGGG +
Preference number: 5 (lower is better)
Translates to: QAVGIKCTSFHPCHKGGTSSITH*LISAAG
Trigger: CCCAGCTGCGGAGATTAACAAATGGGTGATTGAGCT...TGTCCCACCTTTATGGCAGGGGTGGAAGGAGGTACATTTAATTCCCACTGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp CTACTGAACCCAAATATGTCTGTATCACAGCACATTATGAACTCTGGTTTACTTGCAGAAGCCGCTGCGTaGCCTCCGCGCCCCTACCAC +
Preference number: 5 (lower is better)
Translates to: LLNPNMSVSQHIMNSGLLAEAAA*PPRPYH
Trigger: GTGGTAGGGGCGCGGAGGCAACGCAGCGGCTTCTGC...AAGTAAACCAGAGTTCATAATGTGCTGTGATACAGACATATTTGGGTTCAGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530958.5
CDS-3UTR CAA 90 bp CTACTAGGAAGGCTGAGGCACGAGAATCTGAGCTCAGGAGGTGGAGGTTGCAGTAGACAGGAGAATTCCTaGTACCCAGGAATTCAAGGT +
Preference number: 5 (lower is better)
Translates to: LLGRLRHENLSSGGGGCSRQENS*YPGIQG
Trigger: ACCTTGAATTCCTGGGTACAAGGAATTCTCCTGTCT...ACTGCAACCTCCACCTCCTGAGCTCAGATTCTCGTGCCTCAGCCTTCCTAGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531525.2
CDS-3UTR CAA 90 bp GTTCCAGCTATTCAGAAGGCTGAGACAGGAGAATTCCTTGTACCCAGGAATTCACCTGAGCTCAGGAGTTaGAGACCACCCTGGCCAACA +
Preference number: 5 (lower is better)
Translates to: VPAIQKAETGEFLVPRNSPELRS*RPPWPT
Trigger: TGTTGGCCAGGGTGGTCTCAAACTCCTGAGCTCAGG...TGAATTCCTGGGTACAAGGAATTCTCCTGTCTCAGCCTTCTGAATAGCTGGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531525.2
CDS CCA 90 bp GGACACAAAGATGGGAAGAACAGAGACTGGGGACTGTTTGAGGGTTaGAAAGAAAGGGAGGTATGGCTTGAAGGGCTACCTATCAGGTAC +
Preference number: 5 (lower is better)
Translates to: GHKDGKNRDWGLFEG*KEREVWLEGLPIRY
Trigger: GTACCTGATAGGTAGCCCTTCAAGCCATACCTCCCTTTCTTTCCAACCCTCAAACAGTCCCCAGTCTCTGTTCTTCCCATCTTTGTGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000530958.5
ENST00000683468.1
ENST00000683488.1
CDS-3UTR CAA 90 bp CAGGCAGTGGGAATTAAATGTACCTCCTTCCACCCCTGCCATAAAGGTGGGACACAAGAACATCTTCCATaGGCAAGGGGTACTCTTCTC +
Preference number: 5 (lower is better)
Translates to: QAVGIKCTSFHPCHKGGTQEHLP*ARGTLL
Trigger: GAGAAGAGTACCCCTTGCCAATGGAAGATGTTCTTG...TGTCCCACCTTTATGGCAGGGGTGGAAGGAGGTACATTTAATTCCCACTGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp CACCAATGGGGACAGTTCCTGTGCACCATTCAAGAACACCACTTCGCTGAGAGAAGCCAACATGCGAACTaGGTGATGATTGTCAGCAAG +
Preference number: 5 (lower is better)
Translates to: HQWGQFLCTIQEHHFAERSQHAN*VMIVSK
Trigger: CTTGCTGACAATCATCACCAAGTTCGCATGTTGGCT...TCTCTCAGCGAAGTGGTGTTCTTGAATGGTGCACAGGAACTGTCCCCATTGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp CAGGCAGTGGGAATTAAATGTACCTCCTTCCACCCCTGCCATAAAGGTGGGACAAGCCAACATGCGAACTaGGTGATGATTGTCAGCAAG +
Preference number: 5 (lower is better)
Translates to: QAVGIKCTSFHPCHKGGTSQHAN*VMIVSK
Trigger: CTTGCTGACAATCATCACCAAGTTCGCATGTTGGCT...TGTCCCACCTTTATGGCAGGGGTGGAAGGAGGTACATTTAATTCCCACTGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp AGGCAGGCAGTGGGAATTAAATGTACCTCCTTCCACCCCTGCCATAAAGGTGGGTCCTGGAACAATCTATaGATTGACTCTGCAGCCAAC +
Preference number: 5 (lower is better)
Translates to: RQAVGIKCTSFHPCHKGGSWNNL*IDSAAN
Trigger: GTTGGCTGCAGAGTCAATCAATAGATTGTTCCAGGA...CCCACCTTTATGGCAGGGGTGGAAGGAGGTACATTTAATTCCCACTGCCTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp CAGGCAGTGGGAATTAAATGTACCTCCTTCCACCCCTGCCATAAAGGTGGGACACACCATAATCCCATCTaGCGGATTATCCTGAGAAGC +
Preference number: 5 (lower is better)
Translates to: QAVGIKCTSFHPCHKGGTHHNPI*RIILRS
Trigger: GCTTCTCAGGATAATCCGCAAGATGGGATTATGGTG...TGTCCCACCTTTATGGCAGGGGTGGAAGGAGGTACATTTAATTCCCACTGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp CTTCCCTCCACCACAGCCATACAAACTATCTGGCTCCCCTATACTTCTGTAGATTGTGGATCGGCTCGTTaGCGAGAAGTGTCGAAGACA +
Preference number: 5 (lower is better)
Translates to: LPSTTAIQTIWLPYTSVDCGSAR*REVSKT
Trigger: TGTCTTCGACACTTCTCGCAAACGAGCCGATCCACA...ATCTACAGAAGTATAGGGGAGCCAGATAGTTTGTATGGCTGTGGTGGAGGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527805.6
ENST00000529588.5
ENST00000675595.1
CDS-3UTR CAA 90 bp CAGGCAGTGGGAATTAAATGTACCTCCTTCCACCCCTGCCATAAAGGTGGGACATATGTTACTAGGGCTTaGCCCCACATTGCTTCGTGT +
Preference number: 5 (lower is better)
Translates to: QAVGIKCTSFHPCHKGGTYVTRA*PHIASC
Trigger: ACACGAAGCAATGTGGGGCAAAGCCCTAGTAACATA...TGTCCCACCTTTATGGCAGGGGTGGAAGGAGGTACATTTAATTCCCACTGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp CAGGCAGTGGGAATTAAATGTACCTCCTTCCACCCCTGCCATAAAGGTGGGACAGTGTTGATGAGGGGATaGCTGTTTCGAGGTCATATG +
Preference number: 5 (lower is better)
Translates to: QAVGIKCTSFHPCHKGGTVLMRG*LFRGHM
Trigger: CATATGACCTCGAAACAGCAATCCCCTCATCAACAC...TGTCCCACCTTTATGGCAGGGGTGGAAGGAGGTACATTTAATTCCCACTGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp GATCTTGAGAAAAGCTCCCCAATGCTTTCCAGCTCTCCAATGGCCTGCAACCTGGTGTTGATGAGGGGATaGCTGTTTCGAGGTCATATG +
Preference number: 5 (lower is better)
Translates to: DLEKSSPMLSSSPMACNLVLMRG*LFRGHM
Trigger: CATATGACCTCGAAACAGCAATCCCCTCATCAACAC...CAGGTTGCAGGCCATTGGAGAGCTGGAAAGCATTGGGGAGCTTTTCTCAAGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp CAGGCAGTGGGAATTAAATGTACCTCCTTCCACCCCTGCCATAAAGGTGGGACAGTTCCTTCTACTTCTTaGCTGACGGAAGTGCAATGG +
Preference number: 5 (lower is better)
Translates to: QAVGIKCTSFHPCHKGGTVPSTS*LTEVQW
Trigger: CCATTGCACTTCCGTCAGCAAAGAAGTAGAAGGAAC...TGTCCCACCTTTATGGCAGGGGTGGAAGGAGGTACATTTAATTCCCACTGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp AGGCAGGCAGTGGGAATTAAATGTACCTCCTTCCACCCCTGCCATAAAGGTGGGCTAAAATCACTGTCCTaGAGAAGCTGGGAGTGTTTC +
Preference number: 5 (lower is better)
Translates to: RQAVGIKCTSFHPCHKGGLKSLS*RSWECF
Trigger: GAAACACTCCCAGCTTCTCAAGGACAGTGATTTTAG...CCCACCTTTATGGCAGGGGTGGAAGGAGGTACATTTAATTCCCACTGCCTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp AGGCAGGCAGTGGGAATTAAATGTACCTCCTTCCACCCCTGCCATAAAGGTGGGGACTCTGCTCCTTTTTaGCCCAGAATACTTGTGCTT +
Preference number: 5 (lower is better)
Translates to: RQAVGIKCTSFHPCHKGGDSAPF*PRILVL
Trigger: AAGCACAAGTATTCTGGGCAAAAAAGGAGCAGAGTC...CCCACCTTTATGGCAGGGGTGGAAGGAGGTACATTTAATTCCCACTGCCTGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp GCTAACCAGTTGCCACAAACCCTCAGACATTCTGTGTATGTAAGTTTTAGGCTGAGGCCTCCCATCATCTaGGTCCCCATTCTAGCAGCC +
Preference number: 5 (lower is better)
Translates to: ANQLPQTLRHSVYVSFRLRPPII*VPILAA
Trigger: GGCTGCTAGAATGGGGACCAAGATGATGGGAGGCCT...CAGCCTAAAACTTACATACACAGAATGTCTGAGGGTTTGTGGCAACTGGTTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp TCTTTGCTGACGGAAGTGCAATGGTCCCACTGCATATTCCTCCATGCTGCTTGGCATCTGGAAGACCTGTaGCATGACAGCATCTTGTCT +
Preference number: 5 (lower is better)
Translates to: SLLTEVQWSHCIFLHAAWHLEDL*HDSILS
Trigger: AGACAAGATGCTGTCATGCAACAGGTCTTCCAGATG...CCAAGCAGCATGGAGGAATATGCAGTGGGACCATTGCACTTCCGTCAGCAAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp AGGCAGGCAGTGGGAATTAAATGTACCTCCTTCCACCCCTGCCATAAAGGTGGGGGAGTAGGAAGGATTTaGCCCTGTTCAAAAGCAACA +
Preference number: 5 (lower is better)
Translates to: RQAVGIKCTSFHPCHKGGGVGRI*PCSKAT
Trigger: TGTTGCTTTTGAACAGGGCAAAATCCTTCCTACTCC...CCCACCTTTATGGCAGGGGTGGAAGGAGGTACATTTAATTCCCACTGCCTGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp AGGCAGGCAGTGGGAATTAAATGTACCTCCTTCCACCCCTGCCATAAAGGTGGGTATGAGCAAATTCACTaGTCCACCAACACTGAGCAC +
Preference number: 5 (lower is better)
Translates to: RQAVGIKCTSFHPCHKGGYEQIH*STNTEH
Trigger: GTGCTCAGTGTTGGTGGACAAGTGAATTTGCTCATA...CCCACCTTTATGGCAGGGGTGGAAGGAGGTACATTTAATTCCCACTGCCTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp CATCTTCCCTCCACCACAGCCATACAAACTATCTGGCTCCCCTATACTTCTGTAGCCTGGAGGCTTGTGTaGAGGCTGATACATTTGGTT +
Preference number: 5 (lower is better)
Translates to: HLPSTTAIQTIWLPYTSVAWRLV*RLIHLV
Trigger: AACCAAATGTATCAGCCTCAACACAAGCCTCCAGGC...TACAGAAGTATAGGGGAGCCAGATAGTTTGTATGGCTGTGGTGGAGGGAAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp CAGGCAGTGGGAATTAAATGTACCTCCTTCCACCCCTGCCATAAAGGTGGGACAACTCGAATTCGAAAGTaGACAGCCAAAGTCTTGAGG +
Preference number: 5 (lower is better)
Translates to: QAVGIKCTSFHPCHKGGTTRIRK*TAKVLR
Trigger: CCTCAAGACTTTGGCTGTCAACTTTCGAATTCGAGT...TGTCCCACCTTTATGGCAGGGGTGGAAGGAGGTACATTTAATTCCCACTGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp GATCTTGAGAAAAGCTCCCCAATGCTTTCCAGCTCTCCAATGGCCTGCAACCTGACTCGAATTCGAAAGTaGACAGCCAAAGTCTTGAGG +
Preference number: 5 (lower is better)
Translates to: DLEKSSPMLSSSPMACNLTRIRK*TAKVLR
Trigger: CCTCAAGACTTTGGCTGTCAACTTTCGAATTCGAGT...CAGGTTGCAGGCCATTGGAGAGCTGGAAAGCATTGGGGAGCTTTTCTCAAGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp CACCAATGGGGACAGTTCCTGTGCACCATTCAAGAACACCACTTCGCTGAGAGAATAAGCACCTTTTTCTaGGGTTTTGGCTCCTTTCGG +
Preference number: 5 (lower is better)
Translates to: HQWGQFLCTIQEHHFAERISTFF*GFGSFR
Trigger: CCGAAAGGAGCCAAAACCCAAGAAAAAGGTGCTTAT...TCTCTCAGCGAAGTGGTGTTCTTGAATGGTGCACAGGAACTGTCCCCATTGGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp CAGGCAGTGGGAATTAAATGTACCTCCTTCCACCCCTGCCATAAAGGTGGGACAATAAGCACCTTTTTCTaGGGTTTTGGCTCCTTTCGG +
Preference number: 5 (lower is better)
Translates to: QAVGIKCTSFHPCHKGGTISTFF*GFGSFR
Trigger: CCGAAAGGAGCCAAAACCCAAGAAAAAGGTGCTTAT...TGTCCCACCTTTATGGCAGGGGTGGAAGGAGGTACATTTAATTCCCACTGCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp AGGCAGGCAGTGGGAATTAAATGTACCTCCTTCCACCCCTGCCATAAAGGTGGGGTAGATAGGCCAGCATaGGATCTGTTGTCATCTTAT +
Preference number: 5 (lower is better)
Translates to: RQAVGIKCTSFHPCHKGGVDRPA*DLLSSY
Trigger: ATAAGATGACAACAGATCCAATGCTGGCCTATCTAC...CCCACCTTTATGGCAGGGGTGGAAGGAGGTACATTTAATTCCCACTGCCTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp CACAAGGAGATGAGGAGGAAGTGTGTTTGCCTTGGCCTGGGAAATCTCCTATCAGTTCCTTCTACTTCTTaGCTGACGGAAGTGCAATGG +
Preference number: 5 (lower is better)
Translates to: HKEMRRKCVCLGLGNLLSVPSTS*LTEVQW
Trigger: CCATTGCACTTCCGTCAGCAAAGAAGTAGAAGGAAC...TGATAGGAGATTTCCCAGGCCAAGGCAAACACACTTCCTCCTCATCTCCTTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp CAGGCAGTGGGAATTAAATGTACCTCCTTCCACCCCTGCCATAAAGGTGGGACAGACTCTGCTCCTTTTTaGCCCAGAATACTTGTGCTT +
Preference number: 5 (lower is better)
Translates to: QAVGIKCTSFHPCHKGGTDSAPF*PRILVL
Trigger: AAGCACAAGTATTCTGGGCAAAAAAGGAGCAGAGTC...TGTCCCACCTTTATGGCAGGGGTGGAAGGAGGTACATTTAATTCCCACTGCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp CACAAGGAGATGAGGAGGAAGTGTGTTTGCCTTGGCCTGGGAAATCTCCTATCAAGACCTACTTCCTCTTaGGCTCTTTTCAGGAGAGCT +
Preference number: 5 (lower is better)
Translates to: HKEMRRKCVCLGLGNLLSRPTSS*ALFRRA
Trigger: AGCTCTCCTGAAAAGAGCCAAAGAGGAAGTAGGTCT...TGATAGGAGATTTCCCAGGCCAAGGCAAACACACTTCCTCCTCATCTCCTTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp ACCTGTTGCATGACAGCATCTTGTCTCAGGTCATCACGGCCCTTAACAAGCTGTAGACCTACTTCCTCTTaGGCTCTTTTCAGGAGAGCT +
Preference number: 5 (lower is better)
Translates to: TCCMTASCLRSSRPLTSCRPTSS*ALFRRA
Trigger: AGCTCTCCTGAAAAGAGCCAAAGAGGAAGTAGGTCT...ACAGCTTGTTAAGGGCCGTGATGACCTGAGACAAGATGCTGTCATGCAACAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp GCTTTAAATGACTGTATAGTCACCAGATTTCCATATTCTCCTGTGTGGTCCACCAGGCCTCCCATCATCTaGGTCCCCATTCTAGCAGCC +
Preference number: 5 (lower is better)
Translates to: ALNDCIVTRFPYSPVWSTRPPII*VPILAA
Trigger: GGCTGCTAGAATGGGGACCAAGATGATGGGAGGCCT...GGTGGACCACACAGGAGAATATGGAAATCTGGTGACTATACAGTCATTTAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp CTCAATCACCCATTTGTTAATCTCCGCAGCTGGGATGAACATTTTCCTAAGGATAGGCCTCCCATCATCTaGGTCCCCATTCTAGCAGCC +
Preference number: 5 (lower is better)
Translates to: LNHPFVNLRSWDEHFPKDRPPII*VPILAA
Trigger: GGCTGCTAGAATGGGGACCAAGATGATGGGAGGCCT...ATCCTTAGGAAAATGTTCATCCCAGCTGCGGAGATTAACAAATGGGTGATTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp GAGTTGTCCATTTCCTTTTCCATCAGGATCTCCAAAATGACTGTGCGTAGAGCCTTGCATGACAGCATCTaGTCTCAGGTCATCACGGCC +
Preference number: 5 (lower is better)
Translates to: ELSISFSIRISKMTVRRALHDSI*SQVITA
Trigger: GGCCGTGATGACCTGAGACAAGATGCTGTCATGCAA...GGCTCTACGCACAGTCATTTTGGAGATCCTGATGGAAAAGGAAATGGACAACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp GCACAGCTGGCATCCAACTTCTTGATCATTTGCTTGAGAATACTCAGGGCAAGAAGTCGGCTGAGATTTTaGGGGTCTATGGCCTGCTGT +
Preference number: 5 (lower is better)
Translates to: AQLASNFLIICLRILRARSRLRF*GSMACC
Trigger: ACAGCAGGCCATAGACCCCAAAAATCTCAGCCGACT...TCTTGCCCTGAGTATTCTCAAGCAAATGATCAAGAAGTTGGATGCCAGCTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp TGGTGTGTGCCTGTTGTTCCAGCTATTCAGAAGGCTGAGACAGGAGAATTCCTTAGTGGTGTGTGCCTGTaGTTCCAGCTATTCAGAAGG +
Preference number: 5 (lower is better)
Translates to: WCVPVVPAIQKAETGEFLSGVCL*FQLFRR
Trigger: CCTTCTGAATAGCTGGAACAACAGGCACACACCACT...AAGGAATTCTCCTGTCTCAGCCTTCTGAATAGCTGGAACAACAGGCACACACCA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531525.2
CDS TCA 90 bp AATGTCATCTTTGTTCCCTGCGTAACTTCTTCCCAGACTTCTACTTaGGTGCCATCCCAAATTCTAAGGCTAGCTGCGATCCACATCCCC +
Preference number: 5 (lower is better)
Translates to: NVIFVPCVTSSQTST*VPSQILRLAAIHIP
Trigger: GGGGATGTGGATCGCAGCTAGCCTTAGAATTTGGGATGGCACTCAAGTAGAAGTCTGGGAAGAAGTTACGCAGGGAACAAAGATGACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533733.6
CDS CCA 90 bp GCCTCCAGACATTGCCAACTGTCCTCTAGGGGACAAAACTGCTCTTaGCTAAGCATCACTGAGTTAGAGGGAGAGATATATTTCCTTAGC +
Preference number: 5 (lower is better)
Translates to: ASRHCQLSSRGQNCS*LSITELEGEIYFLS
Trigger: GCTAAGGAAATATATCTCTCCCTCTAACTCAGTGATGCTTAGCCAAGAGCAGTTTTGTCCCCTAGAGGACAGTTGGCAATGTCTGGAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000682569.1
CDS-3UTR CAA 90 bp GATCTTGAGAAAAGCTCCCCAATGCTTTCCAGCTCTCCAATGGCCTGCAACCTGTTGACAGCCAAAGTCTaGAGGAAGATAGTAAGAGCT +
Preference number: 5 (lower is better)
Translates to: DLEKSSPMLSSSPMACNLLTAKV*RKIVRA
Trigger: AGCTCTTACTATCTTCCTCAAGACTTTGGCTGTCAA...CAGGTTGCAGGCCATTGGAGAGCTGGAAAGCATTGGGGAGCTTTTCTCAAGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp GAGTTGTCCATTTCCTTTTCCATCAGGATCTCCAAAATGACTGTGCGTAGAGCCCGATCCAGTGATTCCTaGAGATTCTGGTGGACAGAG +
Preference number: 5 (lower is better)
Translates to: ELSISFSIRISKMTVRRARSSDS*RFWWTE
Trigger: CTCTGTCCACCAGAATCTCAAGGAATCACTGGATCG...GGCTCTACGCACAGTCATTTTGGAGATCCTGATGGAAAAGGAAATGGACAACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp AGGCAGGCAGTGGGAATTAAATGTACCTCCTTCCACCCCTGCCATAAAGGTGGGCAGATGCAATCTTATTaGGACTCTTCTTGGTACAGT +
Preference number: 5 (lower is better)
Translates to: RQAVGIKCTSFHPCHKGGQMQSY*DSSWYS
Trigger: ACTGTACCAAGAAGAGTCCAAATAAGATTGCATCTG...CCCACCTTTATGGCAGGGGTGGAAGGAGGTACATTTAATTCCCACTGCCTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp AAAGGCATCAATCAAATATTCTGCCCACTAGCACAAGGAGATGAGGAGGAAGTGGGCACCTATGGTACTTaGGCTCTCTCCAGGTTCGTT +
Preference number: 5 (lower is better)
Translates to: KGINQIFCPLAQGDEEEVGTYGT*ALSRFV
Trigger: AACGAACCTGGAGAGAGCCAAAGTACCATAGGTGCC...CACTTCCTCCTCATCTCCTTGTGCTAGTGGGCAGAATATTTGATTGATGCCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp GTAATGCCCATGCCATCCACAATATCTCTGGTGAGTCTAAAAGGAACTGTCTCAGGCACCTATGGTACTTaGGCTCTCTCCAGGTTCGTT +
Preference number: 5 (lower is better)
Translates to: VMPMPSTISLVSLKGTVSGTYGT*ALSRFV
Trigger: AACGAACCTGGAGAGAGCCAAAGTACCATAGGTGCC...TGAGACAGTTCCTTTTAGACTCACCAGAGATATTGTGGATGGCATGGGCATTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp CTCCACCACAGCCATACAAACTATCTGGCTCCCCTATACTTCTGTAGATTTCTATGCAGGTGGAGGGATTaGGTAGGTTCTAGCGTGCTA +
Preference number: 5 (lower is better)
Translates to: LHHSHTNYLAPLYFCRFLCRWRD*VGSSVL
Trigger: TAGCACGCTAGAACCTACCAAATCCCTCCACCTGCA...TAGAAATCTACAGAAGTATAGGGGAGCCAGATAGTTTGTATGGCTGTGGTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp CAGTTGCCACAAACCCTCAGACATTCTGTGTATGTAAGTTTTAGGCTGGGATTGTGCAGGTGGAGGGATTaGGTAGGTTCTAGCGTGCTA +
Preference number: 5 (lower is better)
Translates to: QLPQTLRHSVYVSFRLGLCRWRD*VGSSVL
Trigger: TAGCACGCTAGAACCTACCAAATCCCTCCACCTGCA...CAATCCCAGCCTAAAACTTACATACACAGAATGTCTGAGGGTTTGTGGCAACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp AAAGGCATCAATCAAATATTCTGCCCACTAGCACAAGGAGATGAGGAGGAAGTGTGCAGGTGGAGGGATTaGGTAGGTTCTAGCGTGCTA +
Preference number: 5 (lower is better)
Translates to: KGINQIFCPLAQGDEEEVCRWRD*VGSSVL
Trigger: TAGCACGCTAGAACCTACCAAATCCCTCCACCTGCA...CACTTCCTCCTCATCTCCTTGTGCTAGTGGGCAGAATATTTGATTGATGCCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp ACCTGTTGCATGACAGCATCTTGTCTCAGGTCATCACGGCCCTTAACAAGCTGTTGTAAGAAACTGTCCTaGAGCATCCCTTGTGTTCTC +
Preference number: 5 (lower is better)
Translates to: TCCMTASCLRSSRPLTSCCKKLS*SIPCVL
Trigger: GAGAACACAAGGGATGCTCAAGGACAGTTTCTTACA...ACAGCTTGTTAAGGGCCGTGATGACCTGAGACAAGATGCTGTCATGCAACAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp AGGCAGGCAGTGGGAATTAAATGTACCTCCTTCCACCCCTGCCATAAAGGTGGGTTAGTCCTTCAAGTCTaGTCAATGGAAGTGCATCAT +
Preference number: 5 (lower is better)
Translates to: RQAVGIKCTSFHPCHKGGLVLQV*SMEVHH
Trigger: ATGATGCACTTCCATTGACAAGACTTGAAGGACTAA...CCCACCTTTATGGCAGGGGTGGAAGGAGGTACATTTAATTCCCACTGCCTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp CACAAGGAGATGAGGAGGAAGTGTGTTTGCCTTGGCCTGGGAAATCTCCTATCACACCAGTGTGGTTTATaGCCATCTTGGATAACTGCA +
Preference number: 5 (lower is better)
Translates to: HKEMRRKCVCLGLGNLLSHQCGL*PSWITA
Trigger: TGCAGTTATCCAAGATGGCAATAAACCACACTGGTG...TGATAGGAGATTTCCCAGGCCAAGGCAAACACACTTCCTCCTCATCTCCTTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp CTCCACCACAGCCATACAAACTATCTGGCTCCCCTATACTTCTGTAGATTTCTATGTGGATCGGCTCGTTaGCGAGAAGTGTCGAAGACA +
Preference number: 5 (lower is better)
Translates to: LHHSHTNYLAPLYFCRFLCGSAR*REVSKT
Trigger: TGTCTTCGACACTTCTCGCAAACGAGCCGATCCACA...TAGAAATCTACAGAAGTATAGGGGAGCCAGATAGTTTGTATGGCTGTGGTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527805.6
ENST00000529588.5
ENST00000675595.1
CDS-3UTR CAA 90 bp TCTAAGCACGTTTCTGCTAACCAGTTGCCACAAACCCTCAGACATTCTGTGTATTTCCTGCCTGGCGTGTaGATGAGGGGATTGCTGTTT +
Preference number: 5 (lower is better)
Translates to: SKHVSANQLPQTLRHSVYFLPGV*MRGLLF
Trigger: AAACAGCAATCCCCTCATCAACACGCCAGGCAGGAA...ATACACAGAATGTCTGAGGGTTTGTGGCAACTGGTTAGCAGAAACGTGCTTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp CCCTCCACCACAGCCATACAAACTATCTGGCTCCCCTATACTTCTGTAGATTTCGTTCCTTCTACTTCTTaGCTGACGGAAGTGCAATGG +
Preference number: 5 (lower is better)
Translates to: PSTTAIQTIWLPYTSVDFVPSTS*LTEVQW
Trigger: CCATTGCACTTCCGTCAGCAAAGAAGTAGAAGGAAC...GAAATCTACAGAAGTATAGGGGAGCCAGATAGTTTGTATGGCTGTGGTGGAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp CACAAGGAGATGAGGAGGAAGTGTGTTTGCCTTGGCCTGGGAAATCTCCTATCACTAAAATCACTGTCCTaGAGAAGCTGGGAGTGTTTC +
Preference number: 5 (lower is better)
Translates to: HKEMRRKCVCLGLGNLLSLKSLS*RSWECF
Trigger: GAAACACTCCCAGCTTCTCAAGGACAGTGATTTTAG...TGATAGGAGATTTCCCAGGCCAAGGCAAACACACTTCCTCCTCATCTCCTTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp CCCTCCACCACAGCCATACAAACTATCTGGCTCCCCTATACTTCTGTAGATTTCAGACCTACTTCCTCTTaGGCTCTTTTCAGGAGAGCT +
Preference number: 5 (lower is better)
Translates to: PSTTAIQTIWLPYTSVDFRPTSS*ALFRRA
Trigger: AGCTCTCCTGAAAAGAGCCAAAGAGGAAGTAGGTCT...GAAATCTACAGAAGTATAGGGGAGCCAGATAGTTTGTATGGCTGTGGTGGAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp CAGTTGCCACAAACCCTCAGACATTCTGTGTATGTAAGTTTTAGGCTGGGATTGAGCTGTCTCCTCTCCTaGCCATCGGAACCTACACAA +
Preference number: 5 (lower is better)
Translates to: QLPQTLRHSVYVSFRLGLSCLLS*PSEPTQ
Trigger: TTGTGTAGGTTCCGATGGCAAGGAGAGGAGACAGCT...CAATCCCAGCCTAAAACTTACATACACAGAATGTCTGAGGGTTTGTGGCAACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp ACTGTCTCAGGAGTAGGAAGGATTTTGCCCTGTTCAAAAGCAACACCTAGATCTAGCTGTCTCCTCTCCTaGCCATCGGAACCTACACAA +
Preference number: 5 (lower is better)
Translates to: TVSGVGRILPCSKATPRSSCLLS*PSEPTQ
Trigger: TTGTGTAGGTTCCGATGGCAAGGAGAGGAGACAGCT...AGATCTAGGTGTTGCTTTTGAACAGGGCAAAATCCTTCCTACTCCTGAGACAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp AAAGGCATCAATCAAATATTCTGCCCACTAGCACAAGGAGATGAGGAGGAAGTGTTGCATGACAGCATCTaGTCTCAGGTCATCACGGCC +
Preference number: 5 (lower is better)
Translates to: KGINQIFCPLAQGDEEEVLHDSI*SQVITA
Trigger: GGCCGTGATGACCTGAGACAAGATGCTGTCATGCAA...CACTTCCTCCTCATCTCCTTGTGCTAGTGGGCAGAATATTTGATTGATGCCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp ACCTGTTGCATGACAGCATCTTGTCTCAGGTCATCACGGCCCTTAACAAGCTGTTATGAGCAAATTCACTaGTCCACCAACACTGAGCAC +
Preference number: 5 (lower is better)
Translates to: TCCMTASCLRSSRPLTSCYEQIH*STNTEH
Trigger: GTGCTCAGTGTTGGTGGACAAGTGAATTTGCTCATA...ACAGCTTGTTAAGGGCCGTGATGACCTGAGACAAGATGCTGTCATGCAACAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp GCCTCCCATCATCTTGGTCCCCATTCTAGCAGCCAATTGGTACATAAGAGGCAATATGAGCAAATTCACTaGTCCACCAACACTGAGCAC +
Preference number: 5 (lower is better)
Translates to: ASHHLGPHSSSQLVHKRQYEQIH*STNTEH
Trigger: GTGCTCAGTGTTGGTGGACAAGTGAATTTGCTCATA...TTGCCTCTTATGTACCAATTGGCTGCTAGAATGGGGACCAAGATGATGGGAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp AGGCAGGCAGTGGGAATTAAATGTACCTCCTTCCACCCCTGCCATAAAGGTGGGACTCCTCATTTGTCCTaGGCAGTTTTCTATCTTAGT +
Preference number: 5 (lower is better)
Translates to: RQAVGIKCTSFHPCHKGGTPHLS*AVFYLS
Trigger: ACTAAGATAGAAAACTGCCAAGGACAAATGAGGAGT...CCCACCTTTATGGCAGGGGTGGAAGGAGGTACATTTAATTCCCACTGCCTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp AGGCAGGCAGTGGGAATTAAATGTACCTCCTTCCACCCCTGCCATAAAGGTGGGCTAACTACTCCTCATTaGTCCTTGGCAGTTTTCTAT +
Preference number: 5 (lower is better)
Translates to: RQAVGIKCTSFHPCHKGGLTTPH*SLAVFY
Trigger: ATAGAAAACTGCCAAGGACAAATGAGGAGTAGTTAG...CCCACCTTTATGGCAGGGGTGGAAGGAGGTACATTTAATTCCCACTGCCTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp CTACTGAACCCAAATATGTCTGTATCACAGCACATTATGAACTCTGGTTTACTTGAGGGGTGCATGAGATaGGCGGTCTGGGGAGAGGAC +
Preference number: 5 (lower is better)
Translates to: LLNPNMSVSQHIMNSGLLEGCMR*AVWGED
Trigger: GTCCTCTCCCCAGACCGCCAATCTCATGCACCCCTC...AAGTAAACCAGAGTTCATAATGTGCTGTGATACAGACATATTTGGGTTCAGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530958.5
CDS-3UTR CAA 90 bp GTATCACAGCACATTATGAACTCTGGTTTACTTGGGTTTTCTTCTGCCACTGTCAGGCAGGAGAATCGCTaGAATCTGGGAGGCAGAGCT +
Preference number: 5 (lower is better)
Translates to: VSQHIMNSGLLGFSSATVRQENR*NLGGRA
Trigger: AGCTCTGCCTCCCAGATTCAAGCGATTCTCCTGCCT...GACAGTGGCAGAAGAAAACCCAAGTAAACCAGAGTTCATAATGTGCTGTGATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530958.5
CDS TCA 90 bp CTTCTACCATCTGCCAAGGTAACACTGCGAGGTCTCACCACAAACTaGATTGATAGTCTCAGGCTGAGTTTGCAGAGAACCAAAGTCACT +
Preference number: 5 (lower is better)
Translates to: LLPSAKVTLRGLTTN*IDSLRLSLQRTKVT
Trigger: AGTGACTTTGGTTCTCTGCAAACTCAGCCTGAGACTATCAATTCAGTTTGTGGTGAGACCTCGCAGTGTTACCTTGGCAGATGGTAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000530958.5
ENST00000683468.1
ENST00000683488.1
CDS-3UTR CAA 90 bp CAGGCAGTGGGAATTAAATGTACCTCCTTCCACCCCTGCCATAAAGGTGGGACATTGAGGCTGATACATTaGGTTTTGCTATTCTCAGAC +
Preference number: 5 (lower is better)
Translates to: QAVGIKCTSFHPCHKGGTLRLIH*VLLFSD
Trigger: GTCTGAGAATAGCAAAACCAAATGTATCAGCCTCAA...TGTCCCACCTTTATGGCAGGGGTGGAAGGAGGTACATTTAATTCCCACTGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp GCTAACCAGTTGCCACAAACCCTCAGACATTCTGTGTATGTAAGTTTTAGGCTGGCCTGGAGGCTTGTGTaGAGGCTGATACATTTGGTT +
Preference number: 5 (lower is better)
Translates to: ANQLPQTLRHSVYVSFRLAWRLV*RLIHLV
Trigger: AACCAAATGTATCAGCCTCAACACAAGCCTCCAGGC...CAGCCTAAAACTTACATACACAGAATGTCTGAGGGTTTGTGGCAACTGGTTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp TCTTCCCTCCACCACAGCCATACAAACTATCTGGCTCCCCTATACTTCTGTAGAACTCGAATTCGAAAGTaGACAGCCAAAGTCTTGAGG +
Preference number: 5 (lower is better)
Translates to: SSLHHSHTNYLAPLYFCRTRIRK*TAKVLR
Trigger: CCTCAAGACTTTGGCTGTCAACTTTCGAATTCGAGT...TCTACAGAAGTATAGGGGAGCCAGATAGTTTGTATGGCTGTGGTGGAGGGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp CAGGCAGTGGGAATTAAATGTACCTCCTTCCACCCCTGCCATAAAGGTGGGACATTGATATTAATTGGGTaGCAATCTGTAGCCAAGGCA +
Preference number: 5 (lower is better)
Translates to: QAVGIKCTSFHPCHKGGTLILIG*QSVAKA
Trigger: TGCCTTGGCTACAGATTGCAACCCAATTAATATCAA...TGTCCCACCTTTATGGCAGGGGTGGAAGGAGGTACATTTAATTCCCACTGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp AGGCAGGCAGTGGGAATTAAATGTACCTCCTTCCACCCCTGCCATAAAGGTGGGCATTGCATTAGAGACTaGGCTTTCTGGAATAATTCT +
Preference number: 5 (lower is better)
Translates to: RQAVGIKCTSFHPCHKGGHCIRD*AFWNNS
Trigger: AGAATTATTCCAGAAAGCCAAGTCTCTAATGCAATG...CCCACCTTTATGGCAGGGGTGGAAGGAGGTACATTTAATTCCCACTGCCTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp CTCAATCACCCATTTGTTAATCTCCGCAGCTGGGATGAACATTTTCCTAAGGATGGCACCTATGGTACTTaGGCTCTCTCCAGGTTCGTT +
Preference number: 5 (lower is better)
Translates to: LNHPFVNLRSWDEHFPKDGTYGT*ALSRFV
Trigger: AACGAACCTGGAGAGAGCCAAAGTACCATAGGTGCC...ATCCTTAGGAAAATGTTCATCCCAGCTGCGGAGATTAACAAATGGGTGATTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp AGCATCACAAAGTGCCTCAACACTTCTGACCATCTGAGGTCTCCTACTTCTGATGTCCTTGAGCATCCCTaGTGTTCTCAGAGTCCATAT +
Preference number: 5 (lower is better)
Translates to: SITKCLNTSDHLRSPTSDVLEHP*CSQSPY
Trigger: ATATGGACTCTGAGAACACAAGGGATGCTCAAGGAC...ATCAGAAGTAGGAGACCTCAGATGGTCAGAAGTGTTGAGGCACTTTGTGATGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp GCACAGCTGGCATCCAACTTCTTGATCATTTGCTTGAGAATACTCAGGGCAAGAAGCCAACATGCGAACTaGGTGATGATTGTCAGCAAG +
Preference number: 5 (lower is better)
Translates to: AQLASNFLIICLRILRARSQHAN*VMIVSK
Trigger: CTTGCTGACAATCATCACCAAGTTCGCATGTTGGCT...TCTTGCCCTGAGTATTCTCAAGCAAATGATCAAGAAGTTGGATGCCAGCTGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp ATTAGAATACTTGAACAGAACAGGAGCCTCATAGCATACCATGCAAGGCTAAAGGGTAGCAGTCTCTCTTaGCTGTGCCATCCCACTGTC +
Preference number: 5 (lower is better)
Translates to: IRILEQNRSLIAYHARLKGSSLS*LCHPTV
Trigger: GACAGTGGGATGGCACAGCAAAGAGAGACTGCTACC...CTTTAGCCTTGCATGGTATGCTATGAGGCTCCTGTTCTGTTCAAGTATTCTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp CATCTTCCCTCCACCACAGCCATACAAACTATCTGGCTCCCCTATACTTCTGTACACCAGTGTGGTTTATaGCCATCTTGGATAACTGCA +
Preference number: 5 (lower is better)
Translates to: HLPSTTAIQTIWLPYTSVHQCGL*PSWITA
Trigger: TGCAGTTATCCAAGATGGCAATAAACCACACTGGTG...TACAGAAGTATAGGGGAGCCAGATAGTTTGTATGGCTGTGGTGGAGGGAAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp CACAAGGAGATGAGGAGGAAGTGTGTTTGCCTTGGCCTGGGAAATCTCCTATCACCAGCATTGGATCTGTaGTCATCTTATAAATCTCCC +
Preference number: 5 (lower is better)
Translates to: HKEMRRKCVCLGLGNLLSPALDL*SSYKSP
Trigger: GGGAGATTTATAAGATGACAACAGATCCAATGCTGG...TGATAGGAGATTTCCCAGGCCAAGGCAAACACACTTCCTCCTCATCTCCTTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp GCCTCCCATCATCTTGGTCCCCATTCTAGCAGCCAATTGGTACATAAGAGGCAACCAGCATTGGATCTGTaGTCATCTTATAAATCTCCC +
Preference number: 5 (lower is better)
Translates to: ASHHLGPHSSSQLVHKRQPALDL*SSYKSP
Trigger: GGGAGATTTATAAGATGACAACAGATCCAATGCTGG...TTGCCTCTTATGTACCAATTGGCTGCTAGAATGGGGACCAAGATGATGGGAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp CTCAATCACCCATTTGTTAATCTCCGCAGCTGGGATGAACATTTTCCTAAGGATTGTGGATCGGCTCGTTaGCGAGAAGTGTCGAAGACA +
Preference number: 5 (lower is better)
Translates to: LNHPFVNLRSWDEHFPKDCGSAR*REVSKT
Trigger: TGTCTTCGACACTTCTCGCAAACGAGCCGATCCACA...ATCCTTAGGAAAATGTTCATCCCAGCTGCGGAGATTAACAAATGGGTGATTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp GGGAAAGCTATTATCTCCCTTAATCTGGACACAACTGTTCAAGCAGTCTATAATCCAAGTTTGCAGGGGTaGTGGATCGGCTCGTTTGCG +
Preference number: 5 (lower is better)
Translates to: GKAIISLNLDTTVQAVYNPSLQG*WIGSFA
Trigger: CGCAAACGAGCCGATCCACAACCCCTGCAAACTTGG...ATTATAGACTGCTTGAACAGTTGTGTCCAGATTAAGGGAGATAATAGCTTTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp TTCAAGAACACCACTTCGCTGAGAGAGGGGAACCACCTTATAAGTACAGATAGTGGGCTTTGCCCCACATaGCTTCGTGTTCATATGTTC +
Preference number: 5 (lower is better)
Translates to: FKNTTSLREGNHLISTDSGLCPT*LRVHMF
Trigger: GAACATATGAACACGAAGCAATGTGGGGCAAAGCCC...ACTATCTGTACTTATAAGGTGGTTCCCCTCTCTCAGCGAAGTGGTGTTCTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp GCTGGCATCCAACTTCTTGATCATTTGCTTGAGAATACTCAGGGCAAGACTCTGTATGTTACTAGGGCTTaGCCCCACATTGCTTCGTGT +
Preference number: 5 (lower is better)
Translates to: AGIQLLDHLLENTQGKTLYVTRA*PHIASC
Trigger: ACACGAAGCAATGTGGGGCAAAGCCCTAGTAACATA...CAGAGTCTTGCCCTGAGTATTCTCAAGCAAATGATCAAGAAGTTGGATGCCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp CCAGAATTTTCAAGCCAGAGGGAACAAAGTCGGAATACCCACATATCATGTTCTTTCCTGCCTGGCGTGTaGATGAGGGGATTGCTGTTT +
Preference number: 5 (lower is better)
Translates to: PEFSSQREQSRNTHISCSFLPGV*MRGLLF
Trigger: AAACAGCAATCCCCTCATCAACACGCCAGGCAGGAA...AGAACATGATATGTGGGTATTCCGACTTTGTTCCCTCTGGCTTGAAAATTCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp GCACAGCTGGCATCCAACTTCTTGATCATTTGCTTGAGAATACTCAGGGCAAGAGTTCCTTCTACTTCTTaGCTGACGGAAGTGCAATGG +
Preference number: 5 (lower is better)
Translates to: AQLASNFLIICLRILRARVPSTS*LTEVQW
Trigger: CCATTGCACTTCCGTCAGCAAAGAAGTAGAAGGAAC...TCTTGCCCTGAGTATTCTCAAGCAAATGATCAAGAAGTTGGATGCCAGCTGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp AGGCAGGCAGTGGGAATTAAATGTACCTCCTTCCACCCCTGCCATAAAGGTGGGAGTTCTACAAGGTGTTaGGTGAGAATGTCCTTAATA +
Preference number: 5 (lower is better)
Translates to: RQAVGIKCTSFHPCHKGGSSTRC*VRMSLI
Trigger: TATTAAGGACATTCTCACCAAACACCTTGTAGAACT...CCCACCTTTATGGCAGGGGTGGAAGGAGGTACATTTAATTCCCACTGCCTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp GTTTACGATCCTCTTTCAGTGCACGCAGGGCTAATTCATCCAACTCCAGCTCTCCAACTTCTTGATCATTaGCTTGAGAATACTCAGGGC +
Preference number: 5 (lower is better)
Translates to: VYDPLSVHAGLIHPTPALQLLDH*LENTQG
Trigger: GCCCTGAGTATTCTCAAGCAAATGATCAAGAAGTTG...GAGAGCTGGAGTTGGATGAATTAGCCCTGCGTGCACTGAAAGAGGATCGTAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp TCTTTGCTGACGGAAGTGCAATGGTCCCACTGCATATTCCTCCATGCTGCTTGGTCTTTTCAGGAGAGCTaGCTTGTTTTCAAATTCCGA +
Preference number: 5 (lower is better)
Translates to: SLLTEVQWSHCIFLHAAWSFQES*LVFKFR
Trigger: TCGGAATTTGAAAACAAGCAAGCTCTCCTGAAAAGA...CCAAGCAGCATGGAGGAATATGCAGTGGGACCATTGCACTTCCGTCAGCAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp CACAAGGAGATGAGGAGGAAGTGTGTTTGCCTTGGCCTGGGAAATCTCCTATCACTCTTCATCATGCCATaGACTTCAGAAACTCCAGAA +
Preference number: 5 (lower is better)
Translates to: HKEMRRKCVCLGLGNLLSLFIMP*TSETPE
Trigger: TTCTGGAGTTTCTGAAGTCAATGGCATGATGAAGAG...TGATAGGAGATTTCCCAGGCCAAGGCAAACACACTTCCTCCTCATCTCCTTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp AGGCAGGCAGTGGGAATTAAATGTACCTCCTTCCACCCCTGCCATAAAGGTGGGTACATATTATTCTATTaGCAGCCTCTGTTCGATCCT +
Preference number: 5 (lower is better)
Translates to: RQAVGIKCTSFHPCHKGGYILFY*QPLFDP
Trigger: AGGATCGAACAGAGGCTGCAAATAGAATAATATGTA...CCCACCTTTATGGCAGGGGTGGAAGGAGGTACATTTAATTCCCACTGCCTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp GCCTCCCATCATCTTGGTCCCCATTCTAGCAGCCAATTGGTACATAAGAGGCAATCACTGAGATTTCGTTaGCATTCTTGGTCATCTGCA +
Preference number: 5 (lower is better)
Translates to: ASHHLGPHSSSQLVHKRQSLRFR*HSWSSA
Trigger: TGCAGATGACCAAGAATGCAAACGAAATCTCAGTGA...TTGCCTCTTATGTACCAATTGGCTGCTAGAATGGGGACCAAGATGATGGGAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp AGGCAGGCAGTGGGAATTAAATGTACCTCCTTCCACCCCTGCCATAAAGGTGGGCCCATAGATAAAGCCTaGCTGAAAATAAACTCACTT +
Preference number: 5 (lower is better)
Translates to: RQAVGIKCTSFHPCHKGGPIDKA*LKINSL
Trigger: AAGTGAGTTTATTTTCAGCAAGGCTTTATCTATGGG...CCCACCTTTATGGCAGGGGTGGAAGGAGGTACATTTAATTCCCACTGCCTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp AGCCAAGAAATTAAAATAAGAATGGGCTTGTGTGCAGCAACAGCCCTGGGAATAGAGGAGGAAGTGTGTTaGCCTTGGCCTGGGAAATCT +
Preference number: 5 (lower is better)
Translates to: SQEIKIRMGLCAATALGIEEEVC*PWPGKS
Trigger: AGATTTCCCAGGCCAAGGCAAACACACTTCCTCCTC...TATTCCCAGGGCTGTTGCTGCACACAAGCCCATTCTTATTTTAATTTCTTGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS CCA 90 bp GATAATCCCAGAAGACAGCGATCCAGTGATTCCTTGAGATTCTGGTaGACAGAGAAGCCAATACTGGACTGGTGCTTTTCTATACCACAT +
Preference number: 5 (lower is better)
Translates to: DNPRRQRSSDSLRFW*TEKPILDWCFSIPH
Trigger: ATGTGGTATAGAAAAGCACCAGTCCAGTATTGGCTTCTCTGTCCACCAGAATCTCAAGGAATCACTGGATCGCTGTCTTCTGGGATTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000278616.9
ENST00000452508.6
ENST00000527805.6
ENST00000675595.1
ENST00000675843.1
ENST00000682516.1
ENST00000683174.1
ENST00000683605.1
ENST00000684037.1
ENST00000684061.1
CDS CCA 90 bp TCTGATAATCCCAGAAGACAGCGATCCAGTGATTCCTTGAGATTCTaGTGGACAGAGAAGCCAATACTGGACTGGTGCTTTTCTATACCA +
Preference number: 5 (lower is better)
Translates to: SDNPRRQRSSDSLRF*WTEKPILDWCFSIP
Trigger: TGGTATAGAAAAGCACCAGTCCAGTATTGGCTTCTCTGTCCACCAGAATCTCAAGGAATCACTGGATCGCTGTCTTCTGGGATTATCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000278616.9
ENST00000452508.6
ENST00000527805.6
ENST00000675595.1
ENST00000675843.1
ENST00000682516.1
ENST00000683174.1
ENST00000683605.1
ENST00000684037.1
ENST00000684061.1
CDS CCA 90 bp TGTCCCAAACAGGAAAATCCACAAAAACCAAGATTGATTAGTGGCTaGTTGCCAGGATCTAGGAGATGCAGGGAATTGGGACTGAATGCT +
Preference number: 5 (lower is better)
Translates to: CPKQENPQKPRLISG*LPGSRRCRELGLNA
Trigger: AGCATTCAGTCCCAATTCCCTGCATCTCCTAGATCCTGGCAACCAGCCACTAATCAATCTTGGTTTTTGTGGATTTTCCTGTTTGGGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000683100.1
CDS-3UTR CAA 90 bp GCCTCCCATCATCTTGGTCCCCATTCTAGCAGCCAATTGGTACATAAGAGGCAAGTTTTCAGCTTGTATTaGCTCAGAACTTATACCACG +
Preference number: 5 (lower is better)
Translates to: ASHHLGPHSSSQLVHKRQVFSLY*LRTYTT
Trigger: CGTGGTATAAGTTCTGAGCAAATACAAGCTGAAAAC...TTGCCTCTTATGTACCAATTGGCTGCTAGAATGGGGACCAAGATGATGGGAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp ACCTGTTGCATGACAGCATCTTGTCTCAGGTCATCACGGCCCTTAACAAGCTGTGTTTTCAGCTTGTATTaGCTCAGAACTTATACCACG +
Preference number: 5 (lower is better)
Translates to: TCCMTASCLRSSRPLTSCVFSLY*LRTYTT
Trigger: CGTGGTATAAGTTCTGAGCAAATACAAGCTGAAAAC...ACAGCTTGTTAAGGGCCGTGATGACCTGAGACAAGATGCTGTCATGCAACAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp CAGGCAGTGGGAATTAAATGTACCTCCTTCCACCCCTGCCATAAAGGTGGGACAGCCAAAGTTTTCAGCTaGTATTTGCTCAGAACTTAT +
Preference number: 5 (lower is better)
Translates to: QAVGIKCTSFHPCHKGGTAKVFS*YLLRTY
Trigger: ATAAGTTCTGAGCAAATACAAGCTGAAAACTTTGGC...TGTCCCACCTTTATGGCAGGGGTGGAAGGAGGTACATTTAATTCCCACTGCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp CTCAATCACCCATTTGTTAATCTCCGCAGCTGGGATGAACATTTTCCTAAGGATCGATCCAGTGATTCCTaGAGATTCTGGTGGACAGAG +
Preference number: 5 (lower is better)
Translates to: LNHPFVNLRSWDEHFPKDRSSDS*RFWWTE
Trigger: CTCTGTCCACCAGAATCTCAAGGAATCACTGGATCG...ATCCTTAGGAAAATGTTCATCCCAGCTGCGGAGATTAACAAATGGGTGATTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp CAGGCAGTGGGAATTAAATGTACCTCCTTCCACCCCTGCCATAAAGGTGGGACACATTGCATTAGAGACTaGGCTTTCTGGAATAATTCT +
Preference number: 5 (lower is better)
Translates to: QAVGIKCTSFHPCHKGGTHCIRD*AFWNNS
Trigger: AGAATTATTCCAGAAAGCCAAGTCTCTAATGCAATG...TGTCCCACCTTTATGGCAGGGGTGGAAGGAGGTACATTTAATTCCCACTGCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp ACCTGTTGCATGACAGCATCTTGTCTCAGGTCATCACGGCCCTTAACAAGCTGTTTATTTGGACTCTTCTaGGTACAGTTGCTCAAGCAA +
Preference number: 5 (lower is better)
Translates to: TCCMTASCLRSSRPLTSCLFGLF*VQLLKQ
Trigger: TTGCTTGAGCAACTGTACCAAGAAGAGTCCAAATAA...ACAGCTTGTTAAGGGCCGTGATGACCTGAGACAAGATGCTGTCATGCAACAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp CACAAGGAGATGAGGAGGAAGTGTGTTTGCCTTGGCCTGGGAAATCTCCTATCACGGTCAAATGGCTTTTaGATGAAGGATGCTAAACTT +
Preference number: 5 (lower is better)
Translates to: HKEMRRKCVCLGLGNLLSRSNGF*MKDAKL
Trigger: AAGTTTAGCATCCTTCATCAAAAAGCCATTTGACCG...TGATAGGAGATTTCCCAGGCCAAGGCAAACACACTTCCTCCTCATCTCCTTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp AAAGGCATCAATCAAATATTCTGCCCACTAGCACAAGGAGATGAGGAGGAAGTGGTCCTTGAGCATCCCTaGTGTTCTCAGAGTCCATAT +
Preference number: 5 (lower is better)
Translates to: KGINQIFCPLAQGDEEEVVLEHP*CSQSPY
Trigger: ATATGGACTCTGAGAACACAAGGGATGCTCAAGGAC...CACTTCCTCCTCATCTCCTTGTGCTAGTGGGCAGAATATTTGATTGATGCCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp CACAAGGAGATGAGGAGGAAGTGTGTTTGCCTTGGCCTGGGAAATCTCCTATCAACTTTTCCAGTCCTCTaGAATCTGATTAGCAATGGA +
Preference number: 5 (lower is better)
Translates to: HKEMRRKCVCLGLGNLLSTFPVL*NLISNG
Trigger: TCCATTGCTAATCAGATTCAAGAGGACTGGAAAAGT...TGATAGGAGATTTCCCAGGCCAAGGCAAACACACTTCCTCCTCATCTCCTTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp AAAGGCATCAATCAAATATTCTGCCCACTAGCACAAGGAGATGAGGAGGAAGTGCACCATAATCCCATCTaGCGGATTATCCTGAGAAGC +
Preference number: 5 (lower is better)
Translates to: KGINQIFCPLAQGDEEEVHHNPI*RIILRS
Trigger: GCTTCTCAGGATAATCCGCAAGATGGGATTATGGTG...CACTTCCTCCTCATCTCCTTGTGCTAGTGGGCAGAATATTTGATTGATGCCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp GCACAGCTGGCATCCAACTTCTTGATCATTTGCTTGAGAATACTCAGGGCAAGAGCTGCTGATCGAACTTaGACACAATCTTCTACCAGT +
Preference number: 5 (lower is better)
Translates to: AQLASNFLIICLRILRARAADRT*TQSSTS
Trigger: ACTGGTAGAAGATTGTGTCAAAGTTCGATCAGCAGC...TCTTGCCCTGAGTATTCTCAAGCAAATGATCAAGAAGTTGGATGCCAGCTGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp TCTAAGCACGTTTCTGCTAACCAGTTGCCACAAACCCTCAGACATTCTGTGTATTATGTTACTAGGGCTTaGCCCCACATTGCTTCGTGT +
Preference number: 5 (lower is better)
Translates to: SKHVSANQLPQTLRHSVYYVTRA*PHIASC
Trigger: ACACGAAGCAATGTGGGGCAAAGCCCTAGTAACATA...ATACACAGAATGTCTGAGGGTTTGTGGCAACTGGTTAGCAGAAACGTGCTTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp TCTAAGCACGTTTCTGCTAACCAGTTGCCACAAACCCTCAGACATTCTGTGTATGTGTTGATGAGGGGATaGCTGTTTCGAGGTCATATG +
Preference number: 5 (lower is better)
Translates to: SKHVSANQLPQTLRHSVYVLMRG*LFRGHM
Trigger: CATATGACCTCGAAACAGCAATCCCCTCATCAACAC...ATACACAGAATGTCTGAGGGTTTGTGGCAACTGGTTAGCAGAAACGTGCTTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp AAAGGCATCAATCAAATATTCTGCCCACTAGCACAAGGAGATGAGGAGGAAGTGGTGTTGATGAGGGGATaGCTGTTTCGAGGTCATATG +
Preference number: 5 (lower is better)
Translates to: KGINQIFCPLAQGDEEEVVLMRG*LFRGHM
Trigger: CATATGACCTCGAAACAGCAATCCCCTCATCAACAC...CACTTCCTCCTCATCTCCTTGTGCTAGTGGGCAGAATATTTGATTGATGCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp ATTAGAATACTTGAACAGAACAGGAGCCTCATAGCATACCATGCAAGGCTAAAGTTCCTGCCTGGCGTGTaGATGAGGGGATTGCTGTTT +
Preference number: 5 (lower is better)
Translates to: IRILEQNRSLIAYHARLKFLPGV*MRGLLF
Trigger: AAACAGCAATCCCCTCATCAACACGCCAGGCAGGAA...CTTTAGCCTTGCATGGTATGCTATGAGGCTCCTGTTCTGTTCAAGTATTCTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp CACAAGGAGATGAGGAGGAAGTGTGTTTGCCTTGGCCTGGGAAATCTCCTATCACTGGCATCCAACTTCTaGATCATTTGCTTGAGAATA +
Preference number: 5 (lower is better)
Translates to: HKEMRRKCVCLGLGNLLSLASNF*IICLRI
Trigger: TATTCTCAAGCAAATGATCAAGAAGTTGGATGCCAG...TGATAGGAGATTTCCCAGGCCAAGGCAAACACACTTCCTCCTCATCTCCTTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp GCCTCCCATCATCTTGGTCCCCATTCTAGCAGCCAATTGGTACATAAGAGGCAACTGGCATCCAACTTCTaGATCATTTGCTTGAGAATA +
Preference number: 5 (lower is better)
Translates to: ASHHLGPHSSSQLVHKRQLASNF*IICLRI
Trigger: TATTCTCAAGCAAATGATCAAGAAGTTGGATGCCAG...TTGCCTCTTATGTACCAATTGGCTGCTAGAATGGGGACCAAGATGATGGGAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp AAAGGCATCAATCAAATATTCTGCCCACTAGCACAAGGAGATGAGGAGGAAGTGGTTTCTGCTAACCAGTaGCCACAAACCCTCAGACAT +
Preference number: 5 (lower is better)
Translates to: KGINQIFCPLAQGDEEEVVSANQ*PQTLRH
Trigger: ATGTCTGAGGGTTTGTGGCAACTGGTTAGCAGAAAC...CACTTCCTCCTCATCTCCTTGTGCTAGTGGGCAGAATATTTGATTGATGCCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp CAAGCCAGAGGGAACAAAGTCGGAATACCCACATATCATGTTCTTCTCCACTTAGTTTCTGCTAACCAGTaGCCACAAACCCTCAGACAT +
Preference number: 5 (lower is better)
Translates to: QARGNKVGIPTYHVLLHLVSANQ*PQTLRH
Trigger: ATGTCTGAGGGTTTGTGGCAACTGGTTAGCAGAAAC...TAAGTGGAGAAGAACATGATATGTGGGTATTCCGACTTTGTTCCCTCTGGCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp AAAGGCATCAATCAAATATTCTGCCCACTAGCACAAGGAGATGAGGAGGAAGTGAGACCTACTTCCTCTTaGGCTCTTTTCAGGAGAGCT +
Preference number: 5 (lower is better)
Translates to: KGINQIFCPLAQGDEEEVRPTSS*ALFRRA
Trigger: AGCTCTCCTGAAAAGAGCCAAAGAGGAAGTAGGTCT...CACTTCCTCCTCATCTCCTTGTGCTAGTGGGCAGAATATTTGATTGATGCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp ACCTGTTGCATGACAGCATCTTGTCTCAGGTCATCACGGCCCTTAACAAGCTGTCATTCTAGCAGCCAATaGGTACATAAGAGGCAAAAA +
Preference number: 5 (lower is better)
Translates to: TCCMTASCLRSSRPLTSCHSSSQ*VHKRQK
Trigger: TTTTTGCCTCTTATGTACCAATTGGCTGCTAGAATG...ACAGCTTGTTAAGGGCCGTGATGACCTGAGACAAGATGCTGTCATGCAACAGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp CACAAGGAGATGAGGAGGAAGTGTGTTTGCCTTGGCCTGGGAAATCTCCTATCAGAAATTCATCTCTGTTaGCATTTGCTAAGGCCAGTA +
Preference number: 5 (lower is better)
Translates to: HKEMRRKCVCLGLGNLLSEIHLC*HLLRPV
Trigger: TACTGGCCTTAGCAAATGCAAACAGAGATGAATTTC...TGATAGGAGATTTCCCAGGCCAAGGCAAACACACTTCCTCCTCATCTCCTTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp AAAGGCATCAATCAAATATTCTGCCCACTAGCACAAGGAGATGAGGAGGAAGTGCATCTGGAAGACCTGTaGCATGACAGCATCTTGTCT +
Preference number: 5 (lower is better)
Translates to: KGINQIFCPLAQGDEEEVHLEDL*HDSILS
Trigger: AGACAAGATGCTGTCATGCAACAGGTCTTCCAGATG...CACTTCCTCCTCATCTCCTTGTGCTAGTGGGCAGAATATTTGATTGATGCCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp ATTAGAATACTTGAACAGAACAGGAGCCTCATAGCATACCATGCAAGGCTAAAGAGTCGGCTGAGATTTTaGGGGTCTATGGCCTGCTGT +
Preference number: 5 (lower is better)
Translates to: IRILEQNRSLIAYHARLKSRLRF*GSMACC
Trigger: ACAGCAGGCCATAGACCCCAAAAATCTCAGCCGACT...CTTTAGCCTTGCATGGTATGCTATGAGGCTCCTGTTCTGTTCAAGTATTCTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp CAGGCAGTGGGAATTAAATGTACCTCCTTCCACCCCTGCCATAAAGGTGGGACACCCATAGATAAAGCCTaGCTGAAAATAAACTCACTT +
Preference number: 5 (lower is better)
Translates to: QAVGIKCTSFHPCHKGGTPIDKA*LKINSL
Trigger: AAGTGAGTTTATTTTCAGCAAGGCTTTATCTATGGG...TGTCCCACCTTTATGGCAGGGGTGGAAGGAGGTACATTTAATTCCCACTGCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp TCACTTAGGAACAGAGAAGCTTCAGCCTGCAGTGAGCTATCATCACACCATTGCGAGTCCCACACTTTTTaGTTTGTTTTTCTGGCCTCT +
Preference number: 5 (lower is better)
Translates to: SLRNREASACSELSSHHCESHTF*FVFLAS
Trigger: AGAGGCCAGAAAAACAAACAAAAAAGTGTGGGACTC...GCAATGGTGTGATGATAGCTCACTGCAGGCTGAAGCTTCTCTGTTCCTAAGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000638443.1
CDS TCA 90 bp AACACATATGGTGTACGTTCCCCATGTCGCTGTTGGGGTAGAAGCTaGGATAGTATCATCAGTAATGGAGACAGCTCACAGTTAGGTAAA +
Preference number: 5 (lower is better)
Translates to: NTYGVRSPCRCWGRS*DSIISNGDSSQLGK
Trigger: TTTACCTAACTGTGAGCTGTCTCCATTACTGATGATACTATCTCAGCTTCTACCCCAACAGCGACATGGGGAACGTACACCATATGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000278616.9
ENST00000452508.6
ENST00000527805.6
ENST00000675595.1
ENST00000675843.1
ENST00000682516.1
ENST00000682956.1
ENST00000683174.1
ENST00000683605.1
ENST00000684037.1
ENST00000684061.1
ENST00000684179.1
CDS GCA 90 bp AACACACATCACTGTCTGGTAAATACAGCAGCTAACGCTCACGAGTaGTCACCACAGGTCAAGATTATCTCACTTATCTTCACAAGACAG +
Preference number: 5 (lower is better)
Translates to: NTHHCLVNTAANAHE*SPQVKIISLIFTRQ
Trigger: CTGTCTTGTGAAGATAAGTGAGATAATCTTGACCTGTGGTGAGCACTCGTGAGCGTTAGCTGCTGTATTTACCAGACAGTGATGTGTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278616.9
ENST00000526567.5
ENST00000683150.1
CDS GCA 90 bp ACTTTTAAGCATATCATAGACCTTGGTAGCAGTCTCTCTTTGCTGTaGCATCCCACTGTCTCTGGTACCCTCATAGGCAAAATAAGGAAG +
Preference number: 5 (lower is better)
Translates to: TFKHIIDLGSSLSLL*HPTVSGTLIGKIRK
Trigger: CTTCCTTATTTTGCCTATGAGGGTACCAGAGACAGTGGGATGGCACAGCAAAGAGAGACTGCTACCAAGGTCTATGATATGCTTAAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000278616.9
ENST00000452508.6
ENST00000527805.6
ENST00000675595.1
ENST00000675843.1
ENST00000682289.1
ENST00000683174.1
CDS CCA 90 bp CTGAAAACCCACAAAATATATTTCATTCAATGCCAGGCCTCACGCTaGAGCTTCAGGGTCCTTCTACACTTTGTGCCTTTACACGCATTT +
Preference number: 5 (lower is better)
Translates to: LKTHKIYFIQCQASR*SFRVLLHFVPLHAF
Trigger: AAATGCGTGTAAAGGCACAAAGTGTAGAAGGACCCTGAAGCTCCAGCGTGAGGCCTGGCATTGAATGAAATATATTTTGTGGGTTTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000530958.5
ENST00000683468.1
ENST00000683488.1
CDS-3UTR CAA 90 bp TCTTCCCTCCACCACAGCCATACAAACTATCTGGCTCCCCTATACTTCTGTAGATTGAGGCTGATACATTaGGTTTTGCTATTCTCAGAC +
Preference number: 5 (lower is better)
Translates to: SSLHHSHTNYLAPLYFCRLRLIH*VLLFSD
Trigger: GTCTGAGAATAGCAAAACCAAATGTATCAGCCTCAA...TCTACAGAAGTATAGGGGAGCCAGATAGTTTGTATGGCTGTGGTGGAGGGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp CATCTTCCCTCCACCACAGCCATACAAACTATCTGGCTCCCCTATACTTCTGTATTGATATTAATTGGGTaGCAATCTGTAGCCAAGGCA +
Preference number: 5 (lower is better)
Translates to: HLPSTTAIQTIWLPYTSVLILIG*QSVAKA
Trigger: TGCCTTGGCTACAGATTGCAACCCAATTAATATCAA...TACAGAAGTATAGGGGAGCCAGATAGTTTGTATGGCTGTGGTGGAGGGAAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp AAAGGCATCAATCAAATATTCTGCCCACTAGCACAAGGAGATGAGGAGGAAGTGGTGAGCTTTCTAGGTTaGACCTCTTGTCTTGACACA +
Preference number: 5 (lower is better)
Translates to: KGINQIFCPLAQGDEEEVVSFLG*TSCLDT
Trigger: TGTGTCAAGACAAGAGGTCAAACCTAGAAAGCTCAC...CACTTCCTCCTCATCTCCTTGTGCTAGTGGGCAGAATATTTGATTGATGCCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp TTCAAGAACACCACTTCGCTGAGAGAGGGGAACCACCTTATAAGTACAGATAGTGTGAGCTTTCTAGGTTaGACCTCTTGTCTTGACACA +
Preference number: 5 (lower is better)
Translates to: FKNTTSLREGNHLISTDSVSFLG*TSCLDT
Trigger: TGTGTCAAGACAAGAGGTCAAACCTAGAAAGCTCAC...ACTATCTGTACTTATAAGGTGGTTCCCCTCTCTCAGCGAAGTGGTGTTCTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp AAAGGCATCAATCAAATATTCTGCCCACTAGCACAAGGAGATGAGGAGGAAGTGCTCTTCTTGGTACAGTaGCTCAAGCAACGTGTACAT +
Preference number: 5 (lower is better)
Translates to: KGINQIFCPLAQGDEEEVLFLVQ*LKQRVH
Trigger: ATGTACACGTTGCTTGAGCAACTGTACCAAGAAGAG...CACTTCCTCCTCATCTCCTTGTGCTAGTGGGCAGAATATTTGATTGATGCCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp CAAGCCAGAGGGAACAAAGTCGGAATACCCACATATCATGTTCTTCTCCACTTACTCTTCTTGGTACAGTaGCTCAAGCAACGTGTACAT +
Preference number: 5 (lower is better)
Translates to: QARGNKVGIPTYHVLLHLLFLVQ*LKQRVH
Trigger: ATGTACACGTTGCTTGAGCAACTGTACCAAGAAGAG...TAAGTGGAGAAGAACATGATATGTGGGTATTCCGACTTTGTTCCCTCTGGCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp CTTCCCTCCACCACAGCCATACAAACTATCTGGCTCCCCTATACTTCTGTAGATCAGATGCAATCTTATTaGGACTCTTCTTGGTACAGT +
Preference number: 5 (lower is better)
Translates to: LPSTTAIQTIWLPYTSVDQMQSY*DSSWYS
Trigger: ACTGTACCAAGAAGAGTCCAAATAAGATTGCATCTG...ATCTACAGAAGTATAGGGGAGCCAGATAGTTTGTATGGCTGTGGTGGAGGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp GCTTCTTCTGGCTACCTCTGGTTTAGTCAGAAATTCATCTCTGTTTGCATTTGCCAAGAACATCTTCCATaGGCAAGGGGTACTCTTCTC +
Preference number: 5 (lower is better)
Translates to: ASSGYLWFSQKFISVCICQEHLP*ARGTLL
Trigger: GAGAAGAGTACCCCTTGCCAATGGAAGATGTTCTTG...GCAAATGCAAACAGAGATGAATTTCTGACTAAACCAGAGGTAGCCAGAAGAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp GTTTACGATCCTCTTTCAGTGCACGCAGGGCTAATTCATCCAACTCCAGCTCTCTACAAAGAACACACATaGGATAGTGGTTTCAGAAGT +
Preference number: 5 (lower is better)
Translates to: VYDPLSVHAGLIHPTPALYKEHT*DSGFRS
Trigger: ACTTCTGAAACCACTATCCAATGTGTGTTCTTTGTA...GAGAGCTGGAGTTGGATGAATTAGCCCTGCGTGCACTGAAAGAGGATCGTAAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp GTTTACGATCCTCTTTCAGTGCACGCAGGGCTAATTCATCCAACTCCAGCTCTCAGTTTTACAAACATCTaGGTCACGACGATACAAAGA +
Preference number: 5 (lower is better)
Translates to: VYDPLSVHAGLIHPTPALSFTNI*VTTIQR
Trigger: TCTTTGTATCGTCGTGACCAAGATGTTTGTAAAACT...GAGAGCTGGAGTTGGATGAATTAGCCCTGCGTGCACTGAAAGAGGATCGTAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp CACAAGGAGATGAGGAGGAAGTGTGTTTGCCTTGGCCTGGGAAATCTCCTATCAAGTTTTACAAACATCTaGGTCACGACGATACAAAGA +
Preference number: 5 (lower is better)
Translates to: HKEMRRKCVCLGLGNLLSSFTNI*VTTIQR
Trigger: TCTTTGTATCGTCGTGACCAAGATGTTTGTAAAACT...TGATAGGAGATTTCCCAGGCCAAGGCAAACACACTTCCTCCTCATCTCCTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp CTCAATCACCCATTTGTTAATCTCCGCAGCTGGGATGAACATTTTCCTAAGGATGTCCTTGAGCATCCCTaGTGTTCTCAGAGTCCATAT +
Preference number: 5 (lower is better)
Translates to: LNHPFVNLRSWDEHFPKDVLEHP*CSQSPY
Trigger: ATATGGACTCTGAGAACACAAGGGATGCTCAAGGAC...ATCCTTAGGAAAATGTTCATCCCAGCTGCGGAGATTAACAAATGGGTGATTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp CCAGAATTTTCAAGCCAGAGGGAACAAAGTCGGAATACCCACATATCATGTTCTGTCCTTGAGCATCCCTaGTGTTCTCAGAGTCCATAT +
Preference number: 5 (lower is better)
Translates to: PEFSSQREQSRNTHISCSVLEHP*CSQSPY
Trigger: ATATGGACTCTGAGAACACAAGGGATGCTCAAGGAC...AGAACATGATATGTGGGTATTCCGACTTTGTTCCCTCTGGCTTGAAAATTCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp TTCAAGAACACCACTTCGCTGAGAGAGGGGAACCACCTTATAAGTACAGATAGTTGTAAGAAACTGTCCTaGAGCATCCCTTGTGTTCTC +
Preference number: 5 (lower is better)
Translates to: FKNTTSLREGNHLISTDSCKKLS*SIPCVL
Trigger: GAGAACACAAGGGATGCTCAAGGACAGTTTCTTACA...ACTATCTGTACTTATAAGGTGGTTCCCCTCTCTCAGCGAAGTGGTGTTCTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp CTCAATCACCCATTTGTTAATCTCCGCAGCTGGGATGAACATTTTCCTAAGGATAGCCAACATGCGAACTaGGTGATGATTGTCAGCAAG +
Preference number: 5 (lower is better)
Translates to: LNHPFVNLRSWDEHFPKDSQHAN*VMIVSK
Trigger: CTTGCTGACAATCATCACCAAGTTCGCATGTTGGCT...ATCCTTAGGAAAATGTTCATCCCAGCTGCGGAGATTAACAAATGGGTGATTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp CACAAGGAGATGAGGAGGAAGTGTGTTTGCCTTGGCCTGGGAAATCTCCTATCAATTTTCAAAAGCTGTTaGCTGAAGCTTCAAAGGAAG +
Preference number: 5 (lower is better)
Translates to: HKEMRRKCVCLGLGNLLSIFKSC*LKLQRK
Trigger: CTTCCTTTGAAGCTTCAGCAAACAGCTTTTGAAAAT...TGATAGGAGATTTCCCAGGCCAAGGCAAACACACTTCCTCCTCATCTCCTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp CACAAGGAGATGAGGAGGAAGTGTGTTTGCCTTGGCCTGGGAAATCTCCTATCATGGTTTATTGCCATCTaGGATAACTGCAACAAATTG +
Preference number: 5 (lower is better)
Translates to: HKEMRRKCVCLGLGNLLSWFIAI*DNCNKL
Trigger: CAATTTGTTGCAGTTATCCAAGATGGCAATAAACCA...TGATAGGAGATTTCCCAGGCCAAGGCAAACACACTTCCTCCTCATCTCCTTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp AAAGGCATCAATCAAATATTCTGCCCACTAGCACAAGGAGATGAGGAGGAAGTGCACCAGTGTGGTTTATaGCCATCTTGGATAACTGCA +
Preference number: 5 (lower is better)
Translates to: KGINQIFCPLAQGDEEEVHQCGL*PSWITA
Trigger: TGCAGTTATCCAAGATGGCAATAAACCACACTGGTG...CACTTCCTCCTCATCTCCTTGTGCTAGTGGGCAGAATATTTGATTGATGCCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp GTAATGCCCATGCCATCCACAATATCTCTGGTGAGTCTAAAAGGAACTGTCTCAGCTGCTGATCGAACTTaGACACAATCTTCTACCAGT +
Preference number: 5 (lower is better)
Translates to: VMPMPSTISLVSLKGTVSAADRT*TQSSTS
Trigger: ACTGGTAGAAGATTGTGTCAAAGTTCGATCAGCAGC...TGAGACAGTTCCTTTTAGACTCACCAGAGATATTGTGGATGGCATGGGCATTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp GCCTCCCATCATCTTGGTCCCCATTCTAGCAGCCAATTGGTACATAAGAGGCAATCAAAAGGGTTTTCTTaGTCAAATCTGGGTACTTCT +
Preference number: 5 (lower is better)
Translates to: ASHHLGPHSSSQLVHKRQSKGFS*SNLGTS
Trigger: AGAAGTACCCAGATTTGACAAAGAAAACCCTTTTGA...TTGCCTCTTATGTACCAATTGGCTGCTAGAATGGGGACCAAGATGATGGGAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp TGGTCCACCTTAATTTCCATAGTAGGGACAACAACATCTTCTAAATTCTTAAGTCCAAGTTTGCAGGGGTaGTGGATCGGCTCGTTTGCG +
Preference number: 5 (lower is better)
Translates to: WSTLISIVGTTTSSKFLSPSLQG*WIGSFA
Trigger: CGCAAACGAGCCGATCCACAACCCCTGCAAACTTGG...ACTTAAGAATTTAGAAGATGTTGTTGTCCCTACTATGGAAATTAAGGTGGACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp CAAAATCTAACTACTCCTCATTTGTCCTTGGCAGTTTTCTATCTTAGTCATTTGCCAAGTTTGCAGGGGTaGTGGATCGGCTCGTTTGCG +
Preference number: 5 (lower is better)
Translates to: QNLTTPHLSLAVFYLSHLPSLQG*WIGSFA
Trigger: CGCAAACGAGCCGATCCACAACCCCTGCAAACTTGG...CAAATGACTAAGATAGAAAACTGCCAAGGACAAATGAGGAGTAGTTAGATTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp ATTAGAATACTTGAACAGAACAGGAGCCTCATAGCATACCATGCAAGGCTAAAGGGGCTTTGCCCCACATaGCTTCGTGTTCATATGTTC +
Preference number: 5 (lower is better)
Translates to: IRILEQNRSLIAYHARLKGLCPT*LRVHMF
Trigger: GAACATATGAACACGAAGCAATGTGGGGCAAAGCCC...CTTTAGCCTTGCATGGTATGCTATGAGGCTCCTGTTCTGTTCAAGTATTCTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp GGGAAAGCTATTATCTCCCTTAATCTGGACACAACTGTTCAAGCAGTCTATAATTTCCTGCCTGGCGTGTaGATGAGGGGATTGCTGTTT +
Preference number: 5 (lower is better)
Translates to: GKAIISLNLDTTVQAVYNFLPGV*MRGLLF
Trigger: AAACAGCAATCCCCTCATCAACACGCCAGGCAGGAA...ATTATAGACTGCTTGAACAGTTGTGTCCAGATTAAGGGAGATAATAGCTTTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp CACAAGGAGATGAGGAGGAAGTGTGTTTGCCTTGGCCTGGGAAATCTCCTATCAAGTTCTACAAGGTGTTaGGTGAGAATGTCCTTAATA +
Preference number: 5 (lower is better)
Translates to: HKEMRRKCVCLGLGNLLSSSTRC*VRMSLI
Trigger: TATTAAGGACATTCTCACCAAACACCTTGTAGAACT...TGATAGGAGATTTCCCAGGCCAAGGCAAACACACTTCCTCCTCATCTCCTTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp ATCCAACTTCTTGATCATTTGCTTGAGAATACTCAGGGCAAGACTCTGCTCCTTTTTTGCCCAGAATACTaGTGCTTCTTCCAGCTGCCA +
Preference number: 5 (lower is better)
Translates to: IQLLDHLLENTQGKTLLLFCPEY*CFFQLP
Trigger: TGGCAGCTGGAAGAAGCACAAGTATTCTGGGCAAAA...AAGGAGCAGAGTCTTGCCCTGAGTATTCTCAAGCAAATGATCAAGAAGTTGGAT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp CTCAATCACCCATTTGTTAATCTCCGCAGCTGGGATGAACATTTTCCTAAGGATTTTTGCCCAGAATACTaGTGCTTCTTCCAGCTGCCA +
Preference number: 5 (lower is better)
Translates to: LNHPFVNLRSWDEHFPKDFCPEY*CFFQLP
Trigger: TGGCAGCTGGAAGAAGCACAAGTATTCTGGGCAAAA...ATCCTTAGGAAAATGTTCATCCCAGCTGCGGAGATTAACAAATGGGTGATTGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp CAGTTGCCACAAACCCTCAGACATTCTGTGTATGTAAGTTTTAGGCTGGGATTGGACTCTGCTCCTTTTTaGCCCAGAATACTTGTGCTT +
Preference number: 5 (lower is better)
Translates to: QLPQTLRHSVYVSFRLGLDSAPF*PRILVL
Trigger: AAGCACAAGTATTCTGGGCAAAAAAGGAGCAGAGTC...CAATCCCAGCCTAAAACTTACATACACAGAATGTCTGAGGGTTTGTGGCAACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp AGCCAAGAAATTAAAATAAGAATGGGCTTGTGTGCAGCAACAGCCCTGGGAATAGTTTCTGCTAACCAGTaGCCACAAACCCTCAGACAT +
Preference number: 5 (lower is better)
Translates to: SQEIKIRMGLCAATALGIVSANQ*PQTLRH
Trigger: ATGTCTGAGGGTTTGTGGCAACTGGTTAGCAGAAAC...TATTCCCAGGGCTGTTGCTGCACACAAGCCCATTCTTATTTTAATTTCTTGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp CAAAATCTAACTACTCCTCATTTGTCCTTGGCAGTTTTCTATCTTAGTCATTTGAGGCCTCCCATCATCTaGGTCCCCATTCTAGCAGCC +
Preference number: 5 (lower is better)
Translates to: QNLTTPHLSLAVFYLSHLRPPII*VPILAA
Trigger: GGCTGCTAGAATGGGGACCAAGATGATGGGAGGCCT...CAAATGACTAAGATAGAAAACTGCCAAGGACAAATGAGGAGTAGTTAGATTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp GGGAAAGCTATTATCTCCCTTAATCTGGACACAACTGTTCAAGCAGTCTATAATAGCTGTCTCCTCTCCTaGCCATCGGAACCTACACAA +
Preference number: 5 (lower is better)
Translates to: GKAIISLNLDTTVQAVYNSCLLS*PSEPTQ
Trigger: TTGTGTAGGTTCCGATGGCAAGGAGAGGAGACAGCT...ATTATAGACTGCTTGAACAGTTGTGTCCAGATTAAGGGAGATAATAGCTTTCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp GGGAAAGCTATTATCTCCCTTAATCTGGACACAACTGTTCAAGCAGTCTATAATTTGCATGACAGCATCTaGTCTCAGGTCATCACGGCC +
Preference number: 5 (lower is better)
Translates to: GKAIISLNLDTTVQAVYNLHDSI*SQVITA
Trigger: GGCCGTGATGACCTGAGACAAGATGCTGTCATGCAA...ATTATAGACTGCTTGAACAGTTGTGTCCAGATTAAGGGAGATAATAGCTTTCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp TTGTTCGCTGCACAGCTGGCATCCAACTTCTTGATCATTTGCTTGAGAATACTCGGAGTAGGAAGGATTTaGCCCTGTTCAAAAGCAACA +
Preference number: 5 (lower is better)
Translates to: LFAAQLASNFLIICLRILGVGRI*PCSKAT
Trigger: TGTTGCTTTTGAACAGGGCAAAATCCTTCCTACTCC...GAGTATTCTCAAGCAAATGATCAAGAAGTTGGATGCCAGCTGTGCAGCGAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp TTCAAGAACACCACTTCGCTGAGAGAGGGGAACCACCTTATAAGTACAGATAGTGGAGTAGGAAGGATTTaGCCCTGTTCAAAAGCAACA +
Preference number: 5 (lower is better)
Translates to: FKNTTSLREGNHLISTDSGVGRI*PCSKAT
Trigger: TGTTGCTTTTGAACAGGGCAAAATCCTTCCTACTCC...ACTATCTGTACTTATAAGGTGGTTCCCCTCTCTCAGCGAAGTGGTGTTCTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp GCTGGCATCCAACTTCTTGATCATTTGCTTGAGAATACTCAGGGCAAGACTCTGTCACTGAGATTTCGTTaGCATTCTTGGTCATCTGCA +
Preference number: 5 (lower is better)
Translates to: AGIQLLDHLLENTQGKTLSLRFR*HSWSSA
Trigger: TGCAGATGACCAAGAATGCAAACGAAATCTCAGTGA...CAGAGTCTTGCCCTGAGTATTCTCAAGCAAATGATCAAGAAGTTGGATGCCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp TCACTTAGGAACAGAGAAGCTTCAGCCTGCAGTGAGCTATCATCACACCATTGCCAGTTACAGATTTCTTaGTTCCTTCTAAACTCCCAC +
Preference number: 5 (lower is better)
Translates to: SLRNREASACSELSSHHCQLQIS*FLLNSH
Trigger: GTGGGAGTTTAGAAGGAACAAAGAAATCTGTAACTG...GCAATGGTGTGATGATAGCTCACTGCAGGCTGAAGCTTCTCTGTTCCTAAGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638443.1
CDS TCA 90 bp CTAGACTCATGGTTCACAATTTCAGAACACACATCACTGTCTGAGTaGCAGGATCATTCGTACACCAAGCCTCAGCAACATGCAATTTAC +
Preference number: 5 (lower is better)
Translates to: LDSWFTISEHTSLSE*QDHSYTKPQQHAIY
Trigger: GTAAATTGCATGTTGCTGAGGCTTGGTGTACGAATGATCCTGTCACTCAGACAGTGATGTGTGTTCTGAAATTGTGAACCATGAGTCTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639953.1
CDS TCA 90 bp AGTACTAGACTCATGGTTCACAATTTCAGAACACACATCACTGTCTaGGTGACAGGATCATTCGTACACCAAGCCTCAGCAACATGCAAT +
Preference number: 5 (lower is better)
Translates to: STRLMVHNFRTHITV*VTGSFVHQASATCN
Trigger: ATTGCATGTTGCTGAGGCTTGGTGTACGAATGATCCTGTCACTCAGACAGTGATGTGTGTTCTGAAATTGTGAACCATGAGTCTAGTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639953.1
CDS TCA 90 bp TTTAAACGAACTGTCCCAAACAGGAAAATCCACAAAAACCAAGATTaGTTAGTGGCTGGTTGCCAGGATCTAGGAGATGCAGGGAATTGG +
Preference number: 5 (lower is better)
Translates to: FKRTVPNRKIHKNQD*LVAGCQDLGDAGNW
Trigger: CCAATTCCCTGCATCTCCTAGATCCTGGCAACCAGCCACTAATCAATCTTGGTTTTTGTGGATTTTCCTGTTTGGGACAGTTCGTTTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000683100.1
CDS GCA 90 bp TTGTCTTATCTGTACCTGGTAAATACAGCAGCTAACGCTCACGAGTaGTCACCACAGGTCAAGATTATCTCACTTATCTTCACAAGACAG +
Preference number: 5 (lower is better)
Translates to: LSYLYLVNTAANAHE*SPQVKIISLIFTRQ
Trigger: CTGTCTTGTGAAGATAAGTGAGATAATCTTGACCTGTGGTGAGCACTCGTGAGCGTTAGCTGCTGTATTTACCAGGTACAGATAAGACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000530958.5
ENST00000683468.1
ENST00000683488.1
CDS-3UTR CAA 90 bp GGGAAAGCTATTATCTCCCTTAATCTGGACACAACTGTTCAAGCAGTCTATAATGCCTGGAGGCTTGTGTaGAGGCTGATACATTTGGTT +
Preference number: 5 (lower is better)
Translates to: GKAIISLNLDTTVQAVYNAWRLV*RLIHLV
Trigger: AACCAAATGTATCAGCCTCAACACAAGCCTCCAGGC...ATTATAGACTGCTTGAACAGTTGTGTCCAGATTAAGGGAGATAATAGCTTTCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp ATCCAACTTCTTGATCATTTGCTTGAGAATACTCAGGGCAAGACTCTGCTCCTTATAAGCACCTTTTTCTaGGGTTTTGGCTCCTTTCGG +
Preference number: 5 (lower is better)
Translates to: IQLLDHLLENTQGKTLLLISTFF*GFGSFR
Trigger: CCGAAAGGAGCCAAAACCCAAGAAAAAGGTGCTTAT...AAGGAGCAGAGTCTTGCCCTGAGTATTCTCAAGCAAATGATCAAGAAGTTGGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp ATTGTTCGCTGCACAGCTGGCATCCAACTTCTTGATCATTTGCTTGAGAATACTGTGAGCTTTCTAGGTTaGACCTCTTGTCTTGACACA +
Preference number: 5 (lower is better)
Translates to: IVRCTAGIQLLDHLLENTVSFLG*TSCLDT
Trigger: TGTGTCAAGACAAGAGGTCAAACCTAGAAAGCTCAC...AGTATTCTCAAGCAAATGATCAAGAAGTTGGATGCCAGCTGTGCAGCGAACAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp AGCCAAGAAATTAAAATAAGAATGGGCTTGTGTGCAGCAACAGCCCTGGGAATAGTGAGCTTTCTAGGTTaGACCTCTTGTCTTGACACA +
Preference number: 5 (lower is better)
Translates to: SQEIKIRMGLCAATALGIVSFLG*TSCLDT
Trigger: TGTGTCAAGACAAGAGGTCAAACCTAGAAAGCTCAC...TATTCCCAGGGCTGTTGCTGCACACAAGCCCATTCTTATTTTAATTTCTTGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp CCCTCCACCACAGCCATACAAACTATCTGGCTCCCCTATACTTCTGTAGATTTCCATTGCATTAGAGACTaGGCTTTCTGGAATAATTCT +
Preference number: 5 (lower is better)
Translates to: PSTTAIQTIWLPYTSVDFHCIRD*AFWNNS
Trigger: AGAATTATTCCAGAAAGCCAAGTCTCTAATGCAATG...GAAATCTACAGAAGTATAGGGGAGCCAGATAGTTTGTATGGCTGTGGTGGAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp AGCATCACAAAGTGCCTCAACACTTCTGACCATCTGAGGTCTCCTACTTCTGATTTATTTGGACTCTTCTaGGTACAGTTGCTCAAGCAA +
Preference number: 5 (lower is better)
Translates to: SITKCLNTSDHLRSPTSDLFGLF*VQLLKQ
Trigger: TTGCTTGAGCAACTGTACCAAGAAGAGTCCAAATAA...ATCAGAAGTAGGAGACCTCAGATGGTCAGAAGTGTTGAGGCACTTTGTGATGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp AGCATCACAAAGTGCCTCAACACTTCTGACCATCTGAGGTCTCCTACTTCTGATCGGTCAAATGGCTTTTaGATGAAGGATGCTAAACTT +
Preference number: 5 (lower is better)
Translates to: SITKCLNTSDHLRSPTSDRSNGF*MKDAKL
Trigger: AAGTTTAGCATCCTTCATCAAAAAGCCATTTGACCG...ATCAGAAGTAGGAGACCTCAGATGGTCAGAAGTGTTGAGGCACTTTGTGATGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp TTTGTGGCTAAAATGTTTTTCAAACAGGTAACAGCTGCTGATCGAACTTTGACAGGCACCTATGGTACTTaGGCTCTCTCCAGGTTCGTT +
Preference number: 5 (lower is better)
Translates to: FVAKMFFKQVTAADRTLTGTYGT*ALSRFV
Trigger: AACGAACCTGGAGAGAGCCAAAGTACCATAGGTGCC...TGTCAAAGTTCGATCAGCAGCTGTTACCTGTTTGAAAAACATTTTAGCCACAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp CACAGCCATACAAACTATCTGGCTCCCCTATACTTCTGTAGATTTCTAAGAGAACAAGAACATCTTCCATaGGCAAGGGGTACTCTTCTC +
Preference number: 5 (lower is better)
Translates to: HSHTNYLAPLYFCRFLREQEHLP*ARGTLL
Trigger: GAGAAGAGTACCCCTTGCCAATGGAAGATGTTCTTG...TTCTCTTAGAAATCTACAGAAGTATAGGGGAGCCAGATAGTTTGTATGGCTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp CTCAATCACCCATTTGTTAATCTCCGCAGCTGGGATGAACATTTTCCTAAGGATTGTAAGAAACTGTCCTaGAGCATCCCTTGTGTTCTC +
Preference number: 5 (lower is better)
Translates to: LNHPFVNLRSWDEHFPKDCKKLS*SIPCVL
Trigger: GAGAACACAAGGGATGCTCAAGGACAGTTTCTTACA...ATCCTTAGGAAAATGTTCATCCCAGCTGCGGAGATTAACAAATGGGTGATTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp GCTTCTTCTGGCTACCTCTGGTTTAGTCAGAAATTCATCTCTGTTTGCATTTGCTCCTGGAACAATCTATaGATTGACTCTGCAGCCAAC +
Preference number: 5 (lower is better)
Translates to: ASSGYLWFSQKFISVCICSWNNL*IDSAAN
Trigger: GTTGGCTGCAGAGTCAATCAATAGATTGTTCCAGGA...GCAAATGCAAACAGAGATGAATTTCTGACTAAACCAGAGGTAGCCAGAAGAAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp CTTCCCTCCACCACAGCCATACAAACTATCTGGCTCCCCTATACTTCTGTAGATATTTTCAAAAGCTGTTaGCTGAAGCTTCAAAGGAAG +
Preference number: 5 (lower is better)
Translates to: LPSTTAIQTIWLPYTSVDIFKSC*LKLQRK
Trigger: CTTCCTTTGAAGCTTCAGCAAACAGCTTTTGAAAAT...ATCTACAGAAGTATAGGGGAGCCAGATAGTTTGTATGGCTGTGGTGGAGGGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp TCTTCCCTCCACCACAGCCATACAAACTATCTGGCTCCCCTATACTTCTGTAGAATTTTCAAAAGCTGTTaGCTGAAGCTTCAAAGGAAG +
Preference number: 5 (lower is better)
Translates to: SSLHHSHTNYLAPLYFCRIFKSC*LKLQRK
Trigger: CTTCCTTTGAAGCTTCAGCAAACAGCTTTTGAAAAT...TCTACAGAAGTATAGGGGAGCCAGATAGTTTGTATGGCTGTGGTGGAGGGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp CAAAATCTAACTACTCCTCATTTGTCCTTGGCAGTTTTCTATCTTAGTCATTTGGGTAGCAGTCTCTCTTaGCTGTGCCATCCCACTGTC +
Preference number: 5 (lower is better)
Translates to: QNLTTPHLSLAVFYLSHLGSSLS*LCHPTV
Trigger: GACAGTGGGATGGCACAGCAAAGAGAGACTGCTACC...CAAATGACTAAGATAGAAAACTGCCAAGGACAAATGAGGAGTAGTTAGATTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp TCTTCCCTCCACCACAGCCATACAAACTATCTGGCTCCCCTATACTTCTGTAGAGATACAAGAAGGCCTTaGGTTGATATAGTGAATCAA +
Preference number: 5 (lower is better)
Translates to: SSLHHSHTNYLAPLYFCRDTRRP*VDIVNQ
Trigger: TTGATTCACTATATCAACCAAAGGCCTTCTTGTATC...TCTACAGAAGTATAGGGGAGCCAGATAGTTTGTATGGCTGTGGTGGAGGGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp CAGCTATTCAGAAGGCTGAGACAGGAGAATTCCTTGTACCCAGGAATTCAAGGTTTAGTCCTTCAAGTCTaGTCAATGGAAGTGCATCAT +
Preference number: 5 (lower is better)
Translates to: QLFRRLRQENSLYPGIQGLVLQV*SMEVHH
Trigger: ATGATGCACTTCCATTGACAAGACTTGAAGGACTAA...ACCTTGAATTCCTGGGTACAAGGAATTCTCCTGTCTCAGCCTTCTGAATAGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531525.2
CDS-3UTR CAA 90 bp CTCAATCACCCATTTGTTAATCTCCGCAGCTGGGATGAACATTTTCCTAAGGATGCTGCTGATCGAACTTaGACACAATCTTCTACCAGT +
Preference number: 5 (lower is better)
Translates to: LNHPFVNLRSWDEHFPKDAADRT*TQSSTS
Trigger: ACTGGTAGAAGATTGTGTCAAAGTTCGATCAGCAGC...ATCCTTAGGAAAATGTTCATCCCAGCTGCGGAGATTAACAAATGGGTGATTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp AGCATCACAAAGTGCCTCAACACTTCTGACCATCTGAGGTCTCCTACTTCTGATGAAGAATTTCACATTTaGTGCCTCCACTGTCCAAAA +
Preference number: 5 (lower is better)
Translates to: SITKCLNTSDHLRSPTSDEEFHI*CLHCPK
Trigger: TTTTGGACAGTGGAGGCACAAAATGTGAAATTCTTC...ATCAGAAGTAGGAGACCTCAGATGGTCAGAAGTGTTGAGGCACTTTGTGATGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp ATCCAACTTCTTGATCATTTGCTTGAGAATACTCAGGGCAAGACTCTGCTCCTTCTAAAATCACTGTCCTaGAGAAGCTGGGAGTGTTTC +
Preference number: 5 (lower is better)
Translates to: IQLLDHLLENTQGKTLLLLKSLS*RSWECF
Trigger: GAAACACTCCCAGCTTCTCAAGGACAGTGATTTTAG...AAGGAGCAGAGTCTTGCCCTGAGTATTCTCAAGCAAATGATCAAGAAGTTGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp GCTTTAAATGACTGTATAGTCACCAGATTTCCATATTCTCCTGTGTGGTCCACCGACTCTGCTCCTTTTTaGCCCAGAATACTTGTGCTT +
Preference number: 5 (lower is better)
Translates to: ALNDCIVTRFPYSPVWSTDSAPF*PRILVL
Trigger: AAGCACAAGTATTCTGGGCAAAAAAGGAGCAGAGTC...GGTGGACCACACAGGAGAATATGGAAATCTGGTGACTATACAGTCATTTAAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp CAAGCCAGAGGGAACAAAGTCGGAATACCCACATATCATGTTCTTCTCCACTTACTCCATCATTTTCTTTaGGCACTGAAAGGCACTGAA +
Preference number: 5 (lower is better)
Translates to: QARGNKVGIPTYHVLLHLLHHFL*ALKGTE
Trigger: TTCAGTGCCTTTCAGTGCCAAAAGAAAATGATGGAG...TAAGTGGAGAAGAACATGATATGTGGGTATTCCGACTTTGTTCCCTCTGGCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp TTTGTGGCTAAAATGTTTTTCAAACAGGTAACAGCTGCTGATCGAACTTTGACAAGTCGGCTGAGATTTTaGGGGTCTATGGCCTGCTGT +
Preference number: 5 (lower is better)
Translates to: FVAKMFFKQVTAADRTLTSRLRF*GSMACC
Trigger: ACAGCAGGCCATAGACCCCAAAAATCTCAGCCGACT...TGTCAAAGTTCGATCAGCAGCTGTTACCTGTTTGAAAAACATTTTAGCCACAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp GTATCACAGCACATTATGAACTCTGGTTTACTTGGGTTTTCTTCTGCCACTGTCGGCTTAAAACATGCTTaGGAGCTGATAAGTAGGAGG +
Preference number: 5 (lower is better)
Translates to: VSQHIMNSGLLGFSSATVGLKHA*ELISRR
Trigger: CCTCCTACTTATCAGCTCCAAAGCATGTTTTAAGCC...GACAGTGGCAGAAGAAAACCCAAGTAAACCAGAGTTCATAATGTGCTGTGATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530958.5
CDS TCA 90 bp AATTTCCTCCGAATATCAGCTGCCCTAAAGGACACAGTATTGGTCTaGGCAGTAGTTACACACAAACACAAGAACTTGAGCATGTCTAAG +
Preference number: 5 (lower is better)
Translates to: NFLRISAALKDTVLV*AVVTHKHKNLSMSK
Trigger: CTTAGACATGCTCAAGTTCTTGTGTTTGTGTGTAACTACTGCTCAGACCAATACTGTGTCCTTTAGGGCAGCTGATATTCGGAGGAAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000278616.9
ENST00000419286.2
ENST00000452508.6
ENST00000527805.6
ENST00000675595.1
ENST00000675843.1
ENST00000683174.1
CDS TCA 90 bp CAGCTTTGTTTTCTTGGTCTCATCCATTCCTATGACTTCAGCAGCTaGAAACCCACAAAATATATTTCATTCAATGCCAGGCCTCACGCT +
Preference number: 5 (lower is better)
Translates to: QLCFLGLIHSYDFSS*KPTKYISFNARPHA
Trigger: AGCGTGAGGCCTGGCATTGAATGAAATATATTTTGTGGGTTTTCAGCTGCTGAAGTCATAGGAATGGATGAGACCAAGAAAACAAAGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000530958.5
ENST00000683468.1
ENST00000683488.1
CDS TCA 90 bp TCTCTCAGTTCTAAATCTGGGTGGATCCAGAAAGGTATAATTTGTTaGAACCTCCTCAAAACCCAAGGTTTGGTGCTGCGTTTGGAATCT +
Preference number: 5 (lower is better)
Translates to: SLSSKSGWIQKGIIC*NLLKTQGLVLRLES
Trigger: AGATTCCAAACGCAGCACCAAACCTTGGGTTTTGAGGAGGTTTCAACAAATTATACCTTTCTGGATCCACCCAGATTTAGAACTGAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682569.1
CDS TCA 90 bp TTGATGGGGGAGGGGAACAAACATCATGCACACTTCATGTTTCCTTaGGGAAACTATCCTAGCATAATGCTCCAAGCTTCTCATTTCATT +
Preference number: 5 (lower is better)
Translates to: LMGEGNKHHAHFMFP*GNYPSIMLQASHFI
Trigger: AATGAAATGAGAAGCTTGGAGCATTATGCTAGGATAGTTTCCTCAAGGAAACATGAAGTGTGCATGATGTTTGTTCCCCTCCCCCATCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000682569.1
CDS TCA 90 bp AACAGTAGAACCAGTATCATACAAATAAGCCAGTCACATGGTAGTTaGTGGGGGAGGGGAACAAACATCATGCACACTTCATGTTTCCTT +
Preference number: 5 (lower is better)
Translates to: NSRTSIIQISQSHGS*WGRGTNIMHTSCFL
Trigger: AAGGAAACATGAAGTGTGCATGATGTTTGTTCCCCTCCCCCATCAACTACCATGTGACTGGCTTATTTGTATGATACTGGTTCTACTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000682569.1
CDS GCA 90 bp TTCTGTCTCAATTACAGAACTTTACTGTTAAGAATTCCCAGGGACTaGGAACAATGTCATCTTTGTTCCCTGCGTAACTTCTTCCCAGAC +
Preference number: 5 (lower is better)
Translates to: FCLNYRTLLLRIPRD*EQCHLCSLRNFFPD
Trigger: GTCTGGGAAGAAGTTACGCAGGGAACAAAGATGACATTGTTCGCAGTCCCTGGGAATTCTTAACAGTAAAGTTCTGTAATTGAGACAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533733.6
CDS CCA 90 bp ACATATTTTGCTCTATTCCCATTTTTACCGTTCCTGGAACTATACTaGTGGTCAGTGCCAAAGTCAAACAGCATACTGCAGGACATGAAG +
Preference number: 5 (lower is better)
Translates to: TYFALFPFLPFLELY*WSVPKSNSILQDMK
Trigger: CTTCATGTCCTGCAGTATGCTGTTTGACTTTGGCACTGACCACCAGTATAGTTCCAGGAACGGTAAAAATGGGAATAGAGCAAAATATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000278616.9
ENST00000452508.6
ENST00000527805.6
ENST00000675595.1
ENST00000675843.1
ENST00000682516.1
ENST00000683174.1
ENST00000683605.1
ENST00000684037.1
ENST00000684061.1
CDS CCA 90 bp AGTGATTCCTTGAGATTCTGGTGGACAGAGAAGCCAATACTGGACTaGTGCTTTTCTATACCACATTCTCTCACAATGGTTAAAAAGTCC +
Preference number: 5 (lower is better)
Translates to: SDSLRFWWTEKPILD*CFSIPHSLTMVKKS
Trigger: GGACTTTTTAACCATTGTGAGAGAATGTGGTATAGAAAAGCACCAGTCCAGTATTGGCTTCTCTGTCCACCAGAATCTCAAGGAATCACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000278616.9
ENST00000452508.6
ENST00000525012.5
ENST00000527805.6
ENST00000533526.1
ENST00000675595.1
ENST00000675843.1
ENST00000682516.1
ENST00000683174.1
ENST00000683605.1
ENST00000684037.1
ENST00000684061.1
CDS CCA 90 bp CATCTTCCGGCCTCTGCTGTAAATACAAAGCTTTCAAAGGATTCATaGTCCAGTCAAAGAGTGGATCATATAGAAGGACCTAAACAGAGA +
Preference number: 5 (lower is better)
Translates to: HLPASAVNTKLSKDS*SSQRVDHIEGPKQR
Trigger: TCTCTGTTTAGGTCCTTCTATATGATCCACTCTTTGACTGGACCATGAATCCTTTGAAAGCTTTGTATTTACAGCAGAGGCCGGAAGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682569.1
CDS-3UTR CAA 90 bp CTACTGAACCCAAATATGTCTGTATCACAGCACATTATGAACTCTGGTTTACTTGCCTGGAGGCTTGTGTaGAGGCTGATACATTTGGTT +
Preference number: 5 (lower is better)
Translates to: LLNPNMSVSQHIMNSGLLAWRLV*RLIHLV
Trigger: AACCAAATGTATCAGCCTCAACACAAGCCTCCAGGC...AAGTAAACCAGAGTTCATAATGTGCTGTGATACAGACATATTTGGGTTCAGTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530958.5
CDS-3UTR CAA 90 bp CAGTGGTGTTTACAACGAATTGATCACAACCAGTTACAGATTTCTTTGTTCCTTGCCTGGAGGCTTGTGTaGAGGCTGATACATTTGGTT +
Preference number: 5 (lower is better)
Translates to: QWCLQRIDHNQLQISLFLAWRLV*RLIHLV
Trigger: AACCAAATGTATCAGCCTCAACACAAGCCTCCAGGC...AAGGAACAAAGAAATCTGTAACTGGTTGTGATCAATTCGTTGTAAACACCACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638443.1
CDS-3UTR CAA 90 bp CTCAATCACCCATTTGTTAATCTCCGCAGCTGGGATGAACATTTTCCTAAGGATTTGACAGCCAAAGTCTaGAGGAAGATAGTAAGAGCT +
Preference number: 5 (lower is better)
Translates to: LNHPFVNLRSWDEHFPKDLTAKV*RKIVRA
Trigger: AGCTCTTACTATCTTCCTCAAGACTTTGGCTGTCAA...ATCCTTAGGAAAATGTTCATCCCAGCTGCGGAGATTAACAAATGGGTGATTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp AGCCAAGAAATTAAAATAAGAATGGGCTTGTGTGCAGCAACAGCCCTGGGAATATTGACAGCCAAAGTCTaGAGGAAGATAGTAAGAGCT +
Preference number: 5 (lower is better)
Translates to: SQEIKIRMGLCAATALGILTAKV*RKIVRA
Trigger: AGCTCTTACTATCTTCCTCAAGACTTTGGCTGTCAA...TATTCCCAGGGCTGTTGCTGCACACAAGCCCATTCTTATTTTAATTTCTTGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp GCTAACCAGTTGCCACAAACCCTCAGACATTCTGTGTATGTAAGTTTTAGGCTGCAGATGCAATCTTATTaGGACTCTTCTTGGTACAGT +
Preference number: 5 (lower is better)
Translates to: ANQLPQTLRHSVYVSFRLQMQSY*DSSWYS
Trigger: ACTGTACCAAGAAGAGTCCAAATAAGATTGCATCTG...CAGCCTAAAACTTACATACACAGAATGTCTGAGGGTTTGTGGCAACTGGTTAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp GCACAGCTGGCATCCAACTTCTTGATCATTTGCTTGAGAATACTCAGGGCAAGATGTCATTCATTAGCTTaGATGTTAACAATCGCAGGA +
Preference number: 5 (lower is better)
Translates to: AQLASNFLIICLRILRARCHSLA*MLTIAG
Trigger: TCCTGCGATTGTTAACATCAAAGCTAATGAATGACA...TCTTGCCCTGAGTATTCTCAAGCAAATGATCAAGAAGTTGGATGCCAGCTGTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp GGGAAAGCTATTATCTCCCTTAATCTGGACACAACTGTTCAAGCAGTCTATAATCAAGAACATCTTCCATaGGCAAGGGGTACTCTTCTC +
Preference number: 5 (lower is better)
Translates to: GKAIISLNLDTTVQAVYNQEHLP*ARGTLL
Trigger: GAGAAGAGTACCCCTTGCCAATGGAAGATGTTCTTG...ATTATAGACTGCTTGAACAGTTGTGTCCAGATTAAGGGAGATAATAGCTTTCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp CACAGCCATACAAACTATCTGGCTCCCCTATACTTCTGTAGATTTCTAAGAGAATCCTGGAACAATCTATaGATTGACTCTGCAGCCAAC +
Preference number: 5 (lower is better)
Translates to: HSHTNYLAPLYFCRFLRESWNNL*IDSAAN
Trigger: GTTGGCTGCAGAGTCAATCAATAGATTGTTCCAGGA...TTCTCTTAGAAATCTACAGAAGTATAGGGGAGCCAGATAGTTTGTATGGCTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp GCTGGCATCCAACTTCTTGATCATTTGCTTGAGAATACTCAGGGCAAGACTCTGTGGTTTATTGCCATCTaGGATAACTGCAACAAATTG +
Preference number: 5 (lower is better)
Translates to: AGIQLLDHLLENTQGKTLWFIAI*DNCNKL
Trigger: CAATTTGTTGCAGTTATCCAAGATGGCAATAAACCA...CAGAGTCTTGCCCTGAGTATTCTCAAGCAAATGATCAAGAAGTTGGATGCCAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp GCTTCTTCTGGCTACCTCTGGTTTAGTCAGAAATTCATCTCTGTTTGCATTTGCGTAGATAGGCCAGCATaGGATCTGTTGTCATCTTAT +
Preference number: 5 (lower is better)
Translates to: ASSGYLWFSQKFISVCICVDRPA*DLLSSY
Trigger: ATAAGATGACAACAGATCCAATGCTGGCCTATCTAC...GCAAATGCAAACAGAGATGAATTTCTGACTAAACCAGAGGTAGCCAGAAGAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp AGCCAAGAAATTAAAATAAGAATGGGCTTGTGTGCAGCAACAGCCCTGGGAATAGTAGATAGGCCAGCATaGGATCTGTTGTCATCTTAT +
Preference number: 5 (lower is better)
Translates to: SQEIKIRMGLCAATALGIVDRPA*DLLSSY
Trigger: ATAAGATGACAACAGATCCAATGCTGGCCTATCTAC...TATTCCCAGGGCTGTTGCTGCACACAAGCCCATTCTTATTTTAATTTCTTGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp GCTGGCATCCAACTTCTTGATCATTTGCTTGAGAATACTCAGGGCAAGACTCTGAGTTCTACAAGGTGTTaGGTGAGAATGTCCTTAATA +
Preference number: 5 (lower is better)
Translates to: AGIQLLDHLLENTQGKTLSSTRC*VRMSLI
Trigger: TATTAAGGACATTCTCACCAAACACCTTGTAGAACT...CAGAGTCTTGCCCTGAGTATTCTCAAGCAAATGATCAAGAAGTTGGATGCCAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp GGGAAAGCTATTATCTCCCTTAATCTGGACACAACTGTTCAAGCAGTCTATAATTTTTGCCCAGAATACTaGTGCTTCTTCCAGCTGCCA +
Preference number: 5 (lower is better)
Translates to: GKAIISLNLDTTVQAVYNFCPEY*CFFQLP
Trigger: TGGCAGCTGGAAGAAGCACAAGTATTCTGGGCAAAA...ATTATAGACTGCTTGAACAGTTGTGTCCAGATTAAGGGAGATAATAGCTTTCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp CTCCTACTTCTGATAGTACATATTATTCTATTTGCAGCCTCTGTTCGATCCTCATTTTGCCCAGAATACTaGTGCTTCTTCCAGCTGCCA +
Preference number: 5 (lower is better)
Translates to: LLLLIVHIILFAASVRSSFCPEY*CFFQLP
Trigger: TGGCAGCTGGAAGAAGCACAAGTATTCTGGGCAAAA...TGAGGATCGAACAGAGGCTGCAAATAGAATAATATGTACTATCAGAAGTAGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp AGCCAAGAAATTAAAATAAGAATGGGCTTGTGTGCAGCAACAGCCCTGGGAATACAACTTCTTGATCATTaGCTTGAGAATACTCAGGGC +
Preference number: 5 (lower is better)
Translates to: SQEIKIRMGLCAATALGIQLLDH*LENTQG
Trigger: GCCCTGAGTATTCTCAAGCAAATGATCAAGAAGTTG...TATTCCCAGGGCTGTTGCTGCACACAAGCCCATTCTTATTTTAATTTCTTGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp CTCAATCACCCATTTGTTAATCTCCGCAGCTGGGATGAACATTTTCCTAAGGATCAACTTCTTGATCATTaGCTTGAGAATACTCAGGGC +
Preference number: 5 (lower is better)
Translates to: LNHPFVNLRSWDEHFPKDQLLDH*LENTQG
Trigger: GCCCTGAGTATTCTCAAGCAAATGATCAAGAAGTTG...ATCCTTAGGAAAATGTTCATCCCAGCTGCGGAGATTAACAAATGGGTGATTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp CTCCACCACAGCCATACAAACTATCTGGCTCCCCTATACTTCTGTAGATTTCTATTCAGGAGAGCTTGCTaGTTTTCAAATTCCGATGAT +
Preference number: 5 (lower is better)
Translates to: LHHSHTNYLAPLYFCRFLFRRAC*FSNSDD
Trigger: ATCATCGGAATTTGAAAACAAGCAAGCTCTCCTGAA...TAGAAATCTACAGAAGTATAGGGGAGCCAGATAGTTTGTATGGCTGTGGTGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp AAAGGCATCAATCAAATATTCTGCCCACTAGCACAAGGAGATGAGGAGGAAGTGTCTTTTCAGGAGAGCTaGCTTGTTTTCAAATTCCGA +
Preference number: 5 (lower is better)
Translates to: KGINQIFCPLAQGDEEEVSFQES*LVFKFR
Trigger: TCGGAATTTGAAAACAAGCAAGCTCTCCTGAAAAGA...CACTTCCTCCTCATCTCCTTGTGCTAGTGGGCAGAATATTTGATTGATGCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp TCTAAGCACGTTTCTGCTAACCAGTTGCCACAAACCCTCAGACATTCTGTGTATGAAATTCATCTCTGTTaGCATTTGCTAAGGCCAGTA +
Preference number: 5 (lower is better)
Translates to: SKHVSANQLPQTLRHSVYEIHLC*HLLRPV
Trigger: TACTGGCCTTAGCAAATGCAAACAGAGATGAATTTC...ATACACAGAATGTCTGAGGGTTTGTGGCAACTGGTTAGCAGAAACGTGCTTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp AAAGGCATCAATCAAATATTCTGCCCACTAGCACAAGGAGATGAGGAGGAAGTGGAAATTCATCTCTGTTaGCATTTGCTAAGGCCAGTA +
Preference number: 5 (lower is better)
Translates to: KGINQIFCPLAQGDEEEVEIHLC*HLLRPV
Trigger: TACTGGCCTTAGCAAATGCAAACAGAGATGAATTTC...CACTTCCTCCTCATCTCCTTGTGCTAGTGGGCAGAATATTTGATTGATGCCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp CAAAATCTAACTACTCCTCATTTGTCCTTGGCAGTTTTCTATCTTAGTCATTTGAGCTGTCTCCTCTCCTaGCCATCGGAACCTACACAA +
Preference number: 5 (lower is better)
Translates to: QNLTTPHLSLAVFYLSHLSCLLS*PSEPTQ
Trigger: TTGTGTAGGTTCCGATGGCAAGGAGAGGAGACAGCT...CAAATGACTAAGATAGAAAACTGCCAAGGACAAATGAGGAGTAGTTAGATTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp AACTATCTGGCTCCCCTATACTTCTGTAGATTTCTAAGAGAAGATCCTGTAAACCATCTGGAAGACCTGTaGCATGACAGCATCTTGTCT +
Preference number: 5 (lower is better)
Translates to: NYLAPLYFCRFLREDPVNHLEDL*HDSILS
Trigger: AGACAAGATGCTGTCATGCAACAGGTCTTCCAGATG...GTTTACAGGATCTTCTCTTAGAAATCTACAGAAGTATAGGGGAGCCAGATAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp AGCCAAGAAATTAAAATAAGAATGGGCTTGTGTGCAGCAACAGCCCTGGGAATACTCCATCATTTTCTTTaGGCACTGAAAGGCACTGAA +
Preference number: 5 (lower is better)
Translates to: SQEIKIRMGLCAATALGILHHFL*ALKGTE
Trigger: TTCAGTGCCTTTCAGTGCCAAAAGAAAATGATGGAG...TATTCCCAGGGCTGTTGCTGCACACAAGCCCATTCTTATTTTAATTTCTTGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp GCTTCTTCTGGCTACCTCTGGTTTAGTCAGAAATTCATCTCTGTTTGCATTTGCCTCCATCATTTTCTTTaGGCACTGAAAGGCACTGAA +
Preference number: 5 (lower is better)
Translates to: ASSGYLWFSQKFISVCICLHHFL*ALKGTE
Trigger: TTCAGTGCCTTTCAGTGCCAAAAGAAAATGATGGAG...GCAAATGCAAACAGAGATGAATTTCTGACTAAACCAGAGGTAGCCAGAAGAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp CTCCACCACAGCCATACAAACTATCTGGCTCCCCTATACTTCTGTAGATTTCTACGTTCAGCTACTTTGTaGAAACTCTGGTCAATATCA +
Preference number: 5 (lower is better)
Translates to: LHHSHTNYLAPLYFCRFLRSATL*KLWSIS
Trigger: TGATATTGACCAGAGTTTCAACAAAGTAGCTGAACG...TAGAAATCTACAGAAGTATAGGGGAGCCAGATAGTTTGTATGGCTGTGGTGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp CAAGCCAGAGGGAACAAAGTCGGAATACCCACATATCATGTTCTTCTCCACTTAACACGTTCAGCTACTTaGTTGAAACTCTGGTCAATA +
Preference number: 5 (lower is better)
Translates to: QARGNKVGIPTYHVLLHLTRSAT*LKLWSI
Trigger: TATTGACCAGAGTTTCAACAAAGTAGCTGAACGTGT...TAAGTGGAGAAGAACATGATATGTGGGTATTCCGACTTTGTTCCCTCTGGCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp CTACTGAACCCAAATATGTCTGTATCACAGCACATTATGAACTCTGGTTTACTTAAAAGGAGGAGGTTATaGGCCAAGTCCGCTAAGCAC +
Preference number: 5 (lower is better)
Translates to: LLNPNMSVSQHIMNSGLLKRRRL*AKSAKH
Trigger: GTGCTTAGCGGACTTGGCCAATAACCTCCTCCTTTT...AAGTAAACCAGAGTTCATAATGTGCTGTGATACAGACATATTTGGGTTCAGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530958.5
CDS-3UTR CAA 90 bp ATAGACAGATACAGACAGAGTGCTTTCTTTGGTGAAGTTTCATTTCATGAGGAAAAAGGGAGGTATGGCTaGAAGGGCTACCTATCAGGT +
Preference number: 5 (lower is better)
Translates to: IDRYRQSAFFGEVSFHEEKGRYG*KGYLSG
Trigger: ACCTGATAGGTAGCCCTTCAAGCCATACCTCCCTTT...TTCCTCATGAAATGAAACTTCACCAAAGAAAGCACTCTGTCTGTATCTGTCTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530958.5
CDS-3UTR CAA 90 bp GTATCACAGCACATTATGAACTCTGGTTTACTTGGGTTTTCTTCTGCCACTGTCGAGAGACATGTCATTTaGCTGAGCCAAAGGCTTAAA +
Preference number: 5 (lower is better)
Translates to: VSQHIMNSGLLGFSSATVERHVI*LSQRLK
Trigger: TTTAAGCCTTTGGCTCAGCAAAATGACATGTCTCTC...GACAGTGGCAGAAGAAAACCCAAGTAAACCAGAGTTCATAATGTGCTGTGATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530958.5
CDS-3UTR CAA 90 bp GTATCACAGCACATTATGAACTCTGGTTTACTTGGGTTTTCTTCTGCCACTGTCTTGAGGCTGATACATTaGGTTTTGCTATTCTCAGAC +
Preference number: 5 (lower is better)
Translates to: VSQHIMNSGLLGFSSATVLRLIH*VLLFSD
Trigger: GTCTGAGAATAGCAAAACCAAATGTATCAGCCTCAA...GACAGTGGCAGAAGAAAACCCAAGTAAACCAGAGTTCATAATGTGCTGTGATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530958.5
CDS-3UTR CAA 90 bp GAATATTCAGAGGAGAGTAGCATAAAACCTAGGTCACGTGAGCTGAAGAAAGTGTTGAGGCTGATACATTaGGTTTTGCTATTCTCAGAC +
Preference number: 5 (lower is better)
Translates to: EYSEESSIKPRSRELKKVLRLIH*VLLFSD
Trigger: GTCTGAGAATAGCAAAACCAAATGTATCAGCCTCAA...CACTTTCTTCAGCTCACGTGACCTAGGTTTTATGCTACTCTCCTCTGAATATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638443.1
CDS-3UTR CAA 90 bp CAAAATCTAACTACTCCTCATTTGTCCTTGGCAGTTTTCTATCTTAGTCATTTGGCCTGGAGGCTTGTGTaGAGGCTGATACATTTGGTT +
Preference number: 5 (lower is better)
Translates to: QNLTTPHLSLAVFYLSHLAWRLV*RLIHLV
Trigger: AACCAAATGTATCAGCCTCAACACAAGCCTCCAGGC...CAAATGACTAAGATAGAAAACTGCCAAGGACAAATGAGGAGTAGTTAGATTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp CTCCACCACAGCCATACAAACTATCTGGCTCCCCTATACTTCTGTAGATTTCTAGCCAAAGTTTTCAGCTaGTATTTGCTCAGAACTTAT +
Preference number: 5 (lower is better)
Translates to: LHHSHTNYLAPLYFCRFLAKVFS*YLLRTY
Trigger: ATAAGTTCTGAGCAAATACAAGCTGAAAACTTTGGC...TAGAAATCTACAGAAGTATAGGGGAGCCAGATAGTTTGTATGGCTGTGGTGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp AAAGGCATCAATCAAATATTCTGCCCACTAGCACAAGGAGATGAGGAGGAAGTGTTCTTCTTTATCTTTTaGGTGGTGTTCACATTCTGG +
Preference number: 5 (lower is better)
Translates to: KGINQIFCPLAQGDEEEVFFFIF*VVFTFW
Trigger: CCAGAATGTGAACACCACCAAAAAGATAAAGAAGAA...CACTTCCTCCTCATCTCCTTGTGCTAGTGGGCAGAATATTTGATTGATGCCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp GCTAACCAGTTGCCACAAACCCTCAGACATTCTGTGTATGTAAGTTTTAGGCTGCATTGCATTAGAGACTaGGCTTTCTGGAATAATTCT +
Preference number: 5 (lower is better)
Translates to: ANQLPQTLRHSVYVSFRLHCIRD*AFWNNS
Trigger: AGAATTATTCCAGAAAGCCAAGTCTCTAATGCAATG...CAGCCTAAAACTTACATACACAGAATGTCTGAGGGTTTGTGGCAACTGGTTAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp CTCAATCACCCATTTGTTAATCTCCGCAGCTGGGATGAACATTTTCCTAAGGATTTATTTGGACTCTTCTaGGTACAGTTGCTCAAGCAA +
Preference number: 5 (lower is better)
Translates to: LNHPFVNLRSWDEHFPKDLFGLF*VQLLKQ
Trigger: TTGCTTGAGCAACTGTACCAAGAAGAGTCCAAATAA...ATCCTTAGGAAAATGTTCATCCCAGCTGCGGAGATTAACAAATGGGTGATTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp CTCAATCACCCATTTGTTAATCTCCGCAGCTGGGATGAACATTTTCCTAAGGATCAGATGCAATCTTATTaGGACTCTTCTTGGTACAGT +
Preference number: 5 (lower is better)
Translates to: LNHPFVNLRSWDEHFPKDQMQSY*DSSWYS
Trigger: ACTGTACCAAGAAGAGTCCAAATAAGATTGCATCTG...ATCCTTAGGAAAATGTTCATCCCAGCTGCGGAGATTAACAAATGGGTGATTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp AAAGGCATCAATCAAATATTCTGCCCACTAGCACAAGGAGATGAGGAGGAAGTGTGTCATTCATTAGCTTaGATGTTAACAATCGCAGGA +
Preference number: 5 (lower is better)
Translates to: KGINQIFCPLAQGDEEEVCHSLA*MLTIAG
Trigger: TCCTGCGATTGTTAACATCAAAGCTAATGAATGACA...CACTTCCTCCTCATCTCCTTGTGCTAGTGGGCAGAATATTTGATTGATGCCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp GTAATGCCCATGCCATCCACAATATCTCTGGTGAGTCTAAAAGGAACTGTCTCATGTCATTCATTAGCTTaGATGTTAACAATCGCAGGA +
Preference number: 5 (lower is better)
Translates to: VMPMPSTISLVSLKGTVSCHSLA*MLTIAG
Trigger: TCCTGCGATTGTTAACATCAAAGCTAATGAATGACA...TGAGACAGTTCCTTTTAGACTCACCAGAGATATTGTGGATGGCATGGGCATTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp AGCCAGAGGGAACAAAGTCGGAATACCCACATATCATGTTCTTCTCCACTTAATCGGTCAAATGGCTTTTaGATGAAGGATGCTAAACTT +
Preference number: 5 (lower is better)
Translates to: SQREQSRNTHISCSSPLNRSNGF*MKDAKL
Trigger: AAGTTTAGCATCCTTCATCAAAAAGCCATTTGACCG...ATTAAGTGGAGAAGAACATGATATGTGGGTATTCCGACTTTGTTCCCTCTGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp TTGTTCGCTGCACAGCTGGCATCCAACTTCTTGATCATTTGCTTGAGAATACTCTACAAAGAACACACATaGGATAGTGGTTTCAGAAGT +
Preference number: 5 (lower is better)
Translates to: LFAAQLASNFLIICLRILYKEHT*DSGFRS
Trigger: ACTTCTGAAACCACTATCCAATGTGTGTTCTTTGTA...GAGTATTCTCAAGCAAATGATCAAGAAGTTGGATGCCAGCTGTGCAGCGAACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp CAAGCCAGAGGGAACAAAGTCGGAATACCCACATATCATGTTCTTCTCCACTTAAGTTTTACAAACATCTaGGTCACGACGATACAAAGA +
Preference number: 5 (lower is better)
Translates to: QARGNKVGIPTYHVLLHLSFTNI*VTTIQR
Trigger: TCTTTGTATCGTCGTGACCAAGATGTTTGTAAAACT...TAAGTGGAGAAGAACATGATATGTGGGTATTCCGACTTTGTTCCCTCTGGCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp TCTAAGCACGTTTCTGCTAACCAGTTGCCACAAACCCTCAGACATTCTGTGTATTATATTTCCTCTCCTTaGTTAGATGCCAAAATGCTC +
Preference number: 5 (lower is better)
Translates to: SKHVSANQLPQTLRHSVYYISSP*LDAKML
Trigger: GAGCATTTTGGCATCTAACAAAGGAGAGGAAATATA...ATACACAGAATGTCTGAGGGTTTGTGGCAACTGGTTAGCAGAAACGTGCTTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp GGGAAAGCTATTATCTCCCTTAATCTGGACACAACTGTTCAAGCAGTCTATAATTCCTGGAACAATCTATaGATTGACTCTGCAGCCAAC +
Preference number: 5 (lower is better)
Translates to: GKAIISLNLDTTVQAVYNSWNNL*IDSAAN
Trigger: GTTGGCTGCAGAGTCAATCAATAGATTGTTCCAGGA...ATTATAGACTGCTTGAACAGTTGTGTCCAGATTAAGGGAGATAATAGCTTTCCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp ATCCAACTTCTTGATCATTTGCTTGAGAATACTCAGGGCAAGACTCTGCTCCTTACTTTTCCAGTCCTCTaGAATCTGATTAGCAATGGA +
Preference number: 5 (lower is better)
Translates to: IQLLDHLLENTQGKTLLLTFPVL*NLISNG
Trigger: TCCATTGCTAATCAGATTCAAGAGGACTGGAAAAGT...AAGGAGCAGAGTCTTGCCCTGAGTATTCTCAAGCAAATGATCAAGAAGTTGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp AAAGGCATCAATCAAATATTCTGCCCACTAGCACAAGGAGATGAGGAGGAAGTGGATACAAGAAGGCCTTaGGTTGATATAGTGAATCAA +
Preference number: 5 (lower is better)
Translates to: KGINQIFCPLAQGDEEEVDTRRP*VDIVNQ
Trigger: TTGATTCACTATATCAACCAAAGGCCTTCTTGTATC...CACTTCCTCCTCATCTCCTTGTGCTAGTGGGCAGAATATTTGATTGATGCCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp GTAATGCCCATGCCATCCACAATATCTCTGGTGAGTCTAAAAGGAACTGTCTCATGGTTTATTGCCATCTaGGATAACTGCAACAAATTG +
Preference number: 5 (lower is better)
Translates to: VMPMPSTISLVSLKGTVSWFIAI*DNCNKL
Trigger: CAATTTGTTGCAGTTATCCAAGATGGCAATAAACCA...TGAGACAGTTCCTTTTAGACTCACCAGAGATATTGTGGATGGCATGGGCATTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp TCCTCTTTGGCTCTTTTCAGGAGAGCTTGCTTGTTTTCAAATTCCGATGATTTCGTAGATAGGCCAGCATaGGATCTGTTGTCATCTTAT +
Preference number: 5 (lower is better)
Translates to: SSLALFRRACLFSNSDDFVDRPA*DLLSSY
Trigger: ATAAGATGACAACAGATCCAATGCTGGCCTATCTAC...GAAATCATCGGAATTTGAAAACAAGCAAGCTCTCCTGAAAAGAGCCAAAGAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp CAAAATCTAACTACTCCTCATTTGTCCTTGGCAGTTTTCTATCTTAGTCATTTGGGGCTTTGCCCCACATaGCTTCGTGTTCATATGTTC +
Preference number: 5 (lower is better)
Translates to: QNLTTPHLSLAVFYLSHLGLCPT*LRVHMF
Trigger: GAACATATGAACACGAAGCAATGTGGGGCAAAGCCC...CAAATGACTAAGATAGAAAACTGCCAAGGACAAATGAGGAGTAGTTAGATTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp TCTAAGCACGTTTCTGCTAACCAGTTGCCACAAACCCTCAGACATTCTGTGTATAGTTCTACAAGGTGTTaGGTGAGAATGTCCTTAATA +
Preference number: 5 (lower is better)
Translates to: SKHVSANQLPQTLRHSVYSSTRC*VRMSLI
Trigger: TATTAAGGACATTCTCACCAAACACCTTGTAGAACT...ATACACAGAATGTCTGAGGGTTTGTGGCAACTGGTTAGCAGAAACGTGCTTAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp CTCAATCACCCATTTGTTAATCTCCGCAGCTGGGATGAACATTTTCCTAAGGATTTCTTGATCATTTGCTaGAGAATACTCAGGGCAAGA +
Preference number: 5 (lower is better)
Translates to: LNHPFVNLRSWDEHFPKDFLIIC*RILRAR
Trigger: TCTTGCCCTGAGTATTCTCAAGCAAATGATCAAGAA...ATCCTTAGGAAAATGTTCATCCCAGCTGCGGAGATTAACAAATGGGTGATTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp GCTTCTTCTGGCTACCTCTGGTTTAGTCAGAAATTCATCTCTGTTTGCATTTGCTTCTTGATCATTTGCTaGAGAATACTCAGGGCAAGA +
Preference number: 5 (lower is better)
Translates to: ASSGYLWFSQKFISVCICFLIIC*RILRAR
Trigger: TCTTGCCCTGAGTATTCTCAAGCAAATGATCAAGAA...GCAAATGCAAACAGAGATGAATTTCTGACTAAACCAGAGGTAGCCAGAAGAAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp ATTGTTCGCTGCACAGCTGGCATCCAACTTCTTGATCATTTGCTTGAGAATACTCTGGCATCCAACTTCTaGATCATTTGCTTGAGAATA +
Preference number: 5 (lower is better)
Translates to: IVRCTAGIQLLDHLLENTLASNF*IICLRI
Trigger: TATTCTCAAGCAAATGATCAAGAAGTTGGATGCCAG...AGTATTCTCAAGCAAATGATCAAGAAGTTGGATGCCAGCTGTGCAGCGAACAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp ATTGTTCGCTGCACAGCTGGCATCCAACTTCTTGATCATTTGCTTGAGAATACTTTCAGGAGAGCTTGCTaGTTTTCAAATTCCGATGAT +
Preference number: 5 (lower is better)
Translates to: IVRCTAGIQLLDHLLENTFRRAC*FSNSDD
Trigger: ATCATCGGAATTTGAAAACAAGCAAGCTCTCCTGAA...AGTATTCTCAAGCAAATGATCAAGAAGTTGGATGCCAGCTGTGCAGCGAACAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp CTCAATCACCCATTTGTTAATCTCCGCAGCTGGGATGAACATTTTCCTAAGGATTTCAGGAGAGCTTGCTaGTTTTCAAATTCCGATGAT +
Preference number: 5 (lower is better)
Translates to: LNHPFVNLRSWDEHFPKDFRRAC*FSNSDD
Trigger: ATCATCGGAATTTGAAAACAAGCAAGCTCTCCTGAA...ATCCTTAGGAAAATGTTCATCCCAGCTGCGGAGATTAACAAATGGGTGATTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp ATTAGAATACTTGAACAGAACAGGAGCCTCATAGCATACCATGCAAGGCTAAAGCTCTTCATCATGCCATaGACTTCAGAAACTCCAGAA +
Preference number: 5 (lower is better)
Translates to: IRILEQNRSLIAYHARLKLFIMP*TSETPE
Trigger: TTCTGGAGTTTCTGAAGTCAATGGCATGATGAAGAG...CTTTAGCCTTGCATGGTATGCTATGAGGCTCCTGTTCTGTTCAAGTATTCTAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp CCAGAATTTTCAAGCCAGAGGGAACAAAGTCGGAATACCCACATATCATGTTCTCATTCTAGCAGCCAATaGGTACATAAGAGGCAAAAA +
Preference number: 5 (lower is better)
Translates to: PEFSSQREQSRNTHISCSHSSSQ*VHKRQK
Trigger: TTTTTGCCTCTTATGTACCAATTGGCTGCTAGAATG...AGAACATGATATGTGGGTATTCCGACTTTGTTCCCTCTGGCTTGAAAATTCTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp CAGTTGCCACAAACCCTCAGACATTCTGTGTATGTAAGTTTTAGGCTGGGATTGTACATATTATTCTATTaGCAGCCTCTGTTCGATCCT +
Preference number: 5 (lower is better)
Translates to: QLPQTLRHSVYVSFRLGLYILFY*QPLFDP
Trigger: AGGATCGAACAGAGGCTGCAAATAGAATAATATGTA...CAATCCCAGCCTAAAACTTACATACACAGAATGTCTGAGGGTTTGTGGCAACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp AGCCAAGAAATTAAAATAAGAATGGGCTTGTGTGCAGCAACAGCCCTGGGAATAACACGTTCAGCTACTTaGTTGAAACTCTGGTCAATA +
Preference number: 5 (lower is better)
Translates to: SQEIKIRMGLCAATALGITRSAT*LKLWSI
Trigger: TATTGACCAGAGTTTCAACAAAGTAGCTGAACGTGT...TATTCCCAGGGCTGTTGCTGCACACAAGCCCATTCTTATTTTAATTTCTTGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp CTCAATCACCCATTTGTTAATCTCCGCAGCTGGGATGAACATTTTCCTAAGGATCTAACTACTCCTCATTaGTCCTTGGCAGTTTTCTAT +
Preference number: 5 (lower is better)
Translates to: LNHPFVNLRSWDEHFPKDLTTPH*SLAVFY
Trigger: ATAGAAAACTGCCAAGGACAAATGAGGAGTAGTTAG...ATCCTTAGGAAAATGTTCATCCCAGCTGCGGAGATTAACAAATGGGTGATTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp TACCTACTGAACCCAAATATGTCTGTATCACAGCACATTATGAACTCTGGTTTAAGTCTCAGGCTGAGTTaGCAGAGAACCAAAGTCACT +
Preference number: 5 (lower is better)
Translates to: YLLNPNMSVSQHIMNSGLSLRLS*QRTKVT
Trigger: AGTGACTTTGGTTCTCTGCAAACTCAGCCTGAGACT...TAAACCAGAGTTCATAATGTGCTGTGATACAGACATATTTGGGTTCAGTAGGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530958.5
CDS-3UTR CAA 90 bp CTACTGAACCCAAATATGTCTGTATCACAGCACATTATGAACTCTGGTTTACTTACCAAGTTGACCCCTTaGCACAACTTGACAATGACG +
Preference number: 5 (lower is better)
Translates to: LLNPNMSVSQHIMNSGLLTKLTP*HNLTMT
Trigger: CGTCATTGTCAAGTTGTGCAAAGGGGTCAACTTGGT...AAGTAAACCAGAGTTCATAATGTGCTGTGATACAGACATATTTGGGTTCAGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530958.5
CDS-3UTR CAA 90 bp TACCTACTGAACCCAAATATGTCTGTATCACAGCACATTATGAACTCTGGTTTATATTTAAAAGCACTCTaGGCCAGGCGTGGTAGTGTG +
Preference number: 5 (lower is better)
Translates to: YLLNPNMSVSQHIMNSGLYLKAL*ARRGSV
Trigger: CACACTACCACGCCTGGCCAAGAGTGCTTTTAAATA...TAAACCAGAGTTCATAATGTGCTGTGATACAGACATATTTGGGTTCAGTAGGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530958.5
CDS-3UTR CAA 90 bp ATCTTCATTCCGTCTCTCTTCATCATGCCATTGACTTCAGAAACTCCAGAATTTCACCATAATCCCATCTaGCGGATTATCTCCAAGAGT +
Preference number: 5 (lower is better)
Translates to: IFIPSLFIMPLTSETPEFHHNPI*RIISKS
Trigger: ACTCTTGGAGATAATCCGCAAGATGGGATTATGGTG...AAATTCTGGAGTTTCTGAAGTCAATGGCATGATGAAGAGAGACGGAATGAAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675595.1
CDS TCA 90 bp CATGAAGAAAAGATACGTAGGGTGCTGATATCCCATCACCCTACATaGGTGTGTCATATGAGTGTGTCAAATTATCACATGTACCTTGAT +
Preference number: 5 (lower is better)
Translates to: HEEKIRRVLISHHPT*VCHMSVSNYHMYLD
Trigger: ATCAAGGTACATGTGATAATTTGACACACTCATATGACACACTCATGTAGGGTGATGGGATATCAGCACCCTACGTATCTTTTCTTCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000682956.1
ENST00000684179.1
CDS GCA 90 bp TTTGGACTCTTCTTGGTACAGTTGCTCAAGCAACGTGTACATAGCTaGATCATATTTCTCAAGGAACCAATTCTGAATTCCTCATTTGTC +
Preference number: 5 (lower is better)
Translates to: FGLFLVQLLKQRVHS*IIFLKEPILNSSFV
Trigger: GACAAATGAGGAATTCAGAATTGGTTCCTTGAGAAATATGATGCAGCTATGTACACGTTGCTTGAGCAACTGTACCAAGAAGAGTCCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000278616.9
ENST00000452508.6
ENST00000527805.6
ENST00000675595.1
ENST00000675843.1
ENST00000682516.1
ENST00000683174.1
ENST00000683605.1
ENST00000684037.1
CDS GCA 90 bp ACACTCCCATTGAGAGTAATTTGGCAATATGTACCAGATTACAGATaGATGTATCCTCTAACCCAGCAATCCAACTTTTGGAAATCCATG +
Preference number: 5 (lower is better)
Translates to: TLPLRVIWQYVPDYR*MYPLTQQSNFWKSM
Trigger: CATGGATTTCCAAAAGTTGGATTGCTGGGTTAGAGGATACATGCATCTGTAATCTGGTACATATTGCCAAATTACTCTCAATGGGAGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525056.2
CDS CCA 90 bp ACTTCCAGAATTCTCTGTCAACCTCAACTAAACTACCCTGAATTATaGCTCCAAGTAAGCCAAAGTTTTCAGCTTGTATTTGCTCAGAAC +
Preference number: 5 (lower is better)
Translates to: TSRILCQPQLNYPEL*LQVSQSFQLVFAQN
Trigger: GTTCTGAGCAAATACAAGCTGAAAACTTTGGCTTACTTGGAGCCATAATTCAGGGTAGTTTAGTTGAGGTTGACAGAGAATTCTGGAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000278616.9
ENST00000452508.6
ENST00000527805.6
ENST00000675595.1
ENST00000675843.1
ENST00000682516.1
ENST00000682956.1
ENST00000683174.1
ENST00000683605.1
ENST00000684037.1
ENST00000684061.1
ENST00000684179.1
CDS-3UTR CAA 90 bp TCGAACTTTGACACAATCTTCTACCAGTGTGTTATTCAGGTAGGTCAGCATTATTTGACAGCCAAAGTCTaGAGGAAGATAGTAAGAGCT +
Preference number: 5 (lower is better)
Translates to: SNFDTIFYQCVIQVGQHYLTAKV*RKIVRA
Trigger: AGCTCTTACTATCTTCCTCAAGACTTTGGCTGTCAA...ATAATGCTGACCTACCTGAATAACACACTGGTAGAAGATTGTGTCAAAGTTCGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp AGCCAAGAAATTAAAATAAGAATGGGCTTGTGTGCAGCAACAGCCCTGGGAATAGCCAAAGTTTTCAGCTaGTATTTGCTCAGAACTTAT +
Preference number: 5 (lower is better)
Translates to: SQEIKIRMGLCAATALGIAKVFS*YLLRTY
Trigger: ATAAGTTCTGAGCAAATACAAGCTGAAAACTTTGGC...TATTCCCAGGGCTGTTGCTGCACACAAGCCCATTCTTATTTTAATTTCTTGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp AGCCAGAGGGAACAAAGTCGGAATACCCACATATCATGTTCTTCTCCACTTAATGCCAAAGTTTTCAGCTaGTATTTGCTCAGAACTTAT +
Preference number: 5 (lower is better)
Translates to: SQREQSRNTHISCSSPLNAKVFS*YLLRTY
Trigger: ATAAGTTCTGAGCAAATACAAGCTGAAAACTTTGGC...ATTAAGTGGAGAAGAACATGATATGTGGGTATTCCGACTTTGTTCCCTCTGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp GCTTCTTCTGGCTACCTCTGGTTTAGTCAGAAATTCATCTCTGTTTGCATTTGCTTCTTCTTTATCTTTTaGGTGGTGTTCACATTCTGG +
Preference number: 5 (lower is better)
Translates to: ASSGYLWFSQKFISVCICFFFIF*VVFTFW
Trigger: CCAGAATGTGAACACCACCAAAAAGATAAAGAAGAA...GCAAATGCAAACAGAGATGAATTTCTGACTAAACCAGAGGTAGCCAGAAGAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp TTTGTGGCTAAAATGTTTTTCAAACAGGTAACAGCTGCTGATCGAACTTTGACACTCTTCTTGGTACAGTaGCTCAAGCAACGTGTACAT +
Preference number: 5 (lower is better)
Translates to: FVAKMFFKQVTAADRTLTLFLVQ*LKQRVH
Trigger: ATGTACACGTTGCTTGAGCAACTGTACCAAGAAGAG...TGTCAAAGTTCGATCAGCAGCTGTTACCTGTTTGAAAAACATTTTAGCCACAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp CACAGCCATACAAACTATCTGGCTCCCCTATACTTCTGTAGATTTCTAAGAGAAACTTTTCCAGTCCTCTaGAATCTGATTAGCAATGGA +
Preference number: 5 (lower is better)
Translates to: HSHTNYLAPLYFCRFLRETFPVL*NLISNG
Trigger: TCCATTGCTAATCAGATTCAAGAGGACTGGAAAAGT...TTCTCTTAGAAATCTACAGAAGTATAGGGGAGCCAGATAGTTTGTATGGCTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp ATTAGAATACTTGAACAGAACAGGAGCCTCATAGCATACCATGCAAGGCTAAAGACTTTTCCAGTCCTCTaGAATCTGATTAGCAATGGA +
Preference number: 5 (lower is better)
Translates to: IRILEQNRSLIAYHARLKTFPVL*NLISNG
Trigger: TCCATTGCTAATCAGATTCAAGAGGACTGGAAAAGT...CTTTAGCCTTGCATGGTATGCTATGAGGCTCCTGTTCTGTTCAAGTATTCTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp ATCCAACTTCTTGATCATTTGCTTGAGAATACTCAGGGCAAGACTCTGCTCCTTGATACAAGAAGGCCTTaGGTTGATATAGTGAATCAA +
Preference number: 5 (lower is better)
Translates to: IQLLDHLLENTQGKTLLLDTRRP*VDIVNQ
Trigger: TTGATTCACTATATCAACCAAAGGCCTTCTTGTATC...AAGGAGCAGAGTCTTGCCCTGAGTATTCTCAAGCAAATGATCAAGAAGTTGGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp ATTAGAATACTTGAACAGAACAGGAGCCTCATAGCATACCATGCAAGGCTAAAGTTAGTCCTTCAAGTCTaGTCAATGGAAGTGCATCAT +
Preference number: 5 (lower is better)
Translates to: IRILEQNRSLIAYHARLKLVLQV*SMEVHH
Trigger: ATGATGCACTTCCATTGACAAGACTTGAAGGACTAA...CTTTAGCCTTGCATGGTATGCTATGAGGCTCCTGTTCTGTTCAAGTATTCTAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp TTTGTGGCTAAAATGTTTTTCAAACAGGTAACAGCTGCTGATCGAACTTTGACACTAAAATCACTGTCCTaGAGAAGCTGGGAGTGTTTC +
Preference number: 5 (lower is better)
Translates to: FVAKMFFKQVTAADRTLTLKSLS*RSWECF
Trigger: GAAACACTCCCAGCTTCTCAAGGACAGTGATTTTAG...TGTCAAAGTTCGATCAGCAGCTGTTACCTGTTTGAAAAACATTTTAGCCACAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp AACTATCTGGCTCCCCTATACTTCTGTAGATTTCTAAGAGAAGATCCTGTAAACCTCTTCATCATGCCATaGACTTCAGAAACTCCAGAA +
Preference number: 5 (lower is better)
Translates to: NYLAPLYFCRFLREDPVNLFIMP*TSETPE
Trigger: TTCTGGAGTTTCTGAAGTCAATGGCATGATGAAGAG...GTTTACAGGATCTTCTCTTAGAAATCTACAGAAGTATAGGGGAGCCAGATAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp ATTAGAATACTTGAACAGAACAGGAGCCTCATAGCATACCATGCAAGGCTAAAGCATTCTAGCAGCCAATaGGTACATAAGAGGCAAAAA +
Preference number: 5 (lower is better)
Translates to: IRILEQNRSLIAYHARLKHSSSQ*VHKRQK
Trigger: TTTTTGCCTCTTATGTACCAATTGGCTGCTAGAATG...CTTTAGCCTTGCATGGTATGCTATGAGGCTCCTGTTCTGTTCAAGTATTCTAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp GCTTTAAATGACTGTATAGTCACCAGATTTCCATATTCTCCTGTGTGGTCCACCTACATATTATTCTATTaGCAGCCTCTGTTCGATCCT +
Preference number: 5 (lower is better)
Translates to: ALNDCIVTRFPYSPVWSTYILFY*QPLFDP
Trigger: AGGATCGAACAGAGGCTGCAAATAGAATAATATGTA...GGTGGACCACACAGGAGAATATGGAAATCTGGTGACTATACAGTCATTTAAAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp AGCCAAGAAATTAAAATAAGAATGGGCTTGTGTGCAGCAACAGCCCTGGGAATATACATATTATTCTATTaGCAGCCTCTGTTCGATCCT +
Preference number: 5 (lower is better)
Translates to: SQEIKIRMGLCAATALGIYILFY*QPLFDP
Trigger: AGGATCGAACAGAGGCTGCAAATAGAATAATATGTA...TATTCCCAGGGCTGTTGCTGCACACAAGCCCATTCTTATTTTAATTTCTTGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp CAAAATCTAACTACTCCTCATTTGTCCTTGGCAGTTTTCTATCTTAGTCATTTGCATCTGGAAGACCTGTaGCATGACAGCATCTTGTCT +
Preference number: 5 (lower is better)
Translates to: QNLTTPHLSLAVFYLSHLHLEDL*HDSILS
Trigger: AGACAAGATGCTGTCATGCAACAGGTCTTCCAGATG...CAAATGACTAAGATAGAAAACTGCCAAGGACAAATGAGGAGTAGTTAGATTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp ATAGACAGATACAGACAGAGTGCTTTCTTTGGTGAAGTTTCATTTCATGAGGAAGGGTCCTTCTACACTTaGTGCCTTTACACGCATTTT +
Preference number: 5 (lower is better)
Translates to: IDRYRQSAFFGEVSFHEEGSFYT*CLYTHF
Trigger: AAAATGCGTGTAAAGGCACAAAGTGTAGAAGGACCC...TTCCTCATGAAATGAAACTTCACCAAAGAAAGCACTCTGTCTGTATCTGTCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530958.5
CDS-3UTR CAA 90 bp CTACTGAACCCAAATATGTCTGTATCACAGCACATTATGAACTCTGGTTTACTTACCCCTTTGCACAACTaGACAATGACGCTTATATCC +
Preference number: 5 (lower is better)
Translates to: LLNPNMSVSQHIMNSGLLTPLHN*TMTLIS
Trigger: GGATATAAGCGTCATTGTCAAGTTGTGCAAAGGGGT...AAGTAAACCAGAGTTCATAATGTGCTGTGATACAGACATATTTGGGTTCAGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530958.5
CDS-3UTR CAA 90 bp CTACTGAACCCAAATATGTCTGTATCACAGCACATTATGAACTCTGGTTTACTTCTACGAGCCTCTGAATaGACGAATTCAGTGTTCCTT +
Preference number: 5 (lower is better)
Translates to: LLNPNMSVSQHIMNSGLLLRASE*TNSVFL
Trigger: AAGGAACACTGAATTCGTCAATTCAGAGGCTCGTAG...AAGTAAACCAGAGTTCATAATGTGCTGTGATACAGACATATTTGGGTTCAGTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530958.5
CDS-3UTR CAA 90 bp CTACTGAACCCAAATATGTCTGTATCACAGCACATTATGAACTCTGGTTTACTTAAAGAACACAGTATGTaGGCGGAACTGAAAGAAGGC +
Preference number: 5 (lower is better)
Translates to: LLNPNMSVSQHIMNSGLLKEHSM*AELKEG
Trigger: GCCTTCTTTCAGTTCCGCCAACATACTGTGTTCTTT...AAGTAAACCAGAGTTCATAATGTGCTGTGATACAGACATATTTGGGTTCAGTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530958.5
CDS-3UTR CAA 90 bp GTATCACAGCACATTATGAACTCTGGTTTACTTGGGTTTTCTTCTGCCACTGTCATATTTTACTATGCCTaGATTCCACTGAGTAGCTCT +
Preference number: 5 (lower is better)
Translates to: VSQHIMNSGLLGFSSATVIFYYA*IPLSSS
Trigger: AGAGCTACTCAGTGGAATCAAGGCATAGTAAAATAT...GACAGTGGCAGAAGAAAACCCAAGTAAACCAGAGTTCATAATGTGCTGTGATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530958.5
CDS-3UTR CAA 90 bp TACCTACTGAACCCAAATATGTCTGTATCACAGCACATTATGAACTCTGGTTTAAAACTGTCAGGTCACTaGGGGGATATAGACAGATAC +
Preference number: 5 (lower is better)
Translates to: YLLNPNMSVSQHIMNSGLKLSGH*GDIDRY
Trigger: GTATCTGTCTATATCCCCCAAGTGACCTGACAGTTT...TAAACCAGAGTTCATAATGTGCTGTGATACAGACATATTTGGGTTCAGTAGGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530958.5
CDS TCA 90 bp AATAAATCTGACTTTTGTGAGCTTTCTAGGTTTGACCTCTTGTCTTaGCACAATGCAACTTCCGTAAGGCATCGTAACACATATGGTGTA +
Preference number: 5 (lower is better)
Translates to: NKSDFCELSRFDLLS*HNATSVRHRNTYGV
Trigger: TACACCATATGTGTTACGATGCCTTACGGAAGTTGCATTGTGTCAAGACAAGAGGTCAAACCTAGAAAGCTCACAAAAGTCAGATTTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000278616.9
ENST00000452508.6
ENST00000527805.6
ENST00000675595.1
ENST00000675843.1
ENST00000682516.1
ENST00000682956.1
ENST00000683174.1
ENST00000683605.1
ENST00000684037.1
ENST00000684061.1
ENST00000684179.1
CDS-3UTR CAA 90 bp TCGAACTTTGACACAATCTTCTACCAGTGTGTTATTCAGGTAGGTCAGCATTATTTGAGGCTGATACATTaGGTTTTGCTATTCTCAGAC +
Preference number: 5 (lower is better)
Translates to: SNFDTIFYQCVIQVGQHYLRLIH*VLLFSD
Trigger: GTCTGAGAATAGCAAAACCAAATGTATCAGCCTCAA...ATAATGCTGACCTACCTGAATAACACACTGGTAGAAGATTGTGTCAAAGTTCGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp CAAAATCTAACTACTCCTCATTTGTCCTTGGCAGTTTTCTATCTTAGTCATTTGACTCGAATTCGAAAGTaGACAGCCAAAGTCTTGAGG +
Preference number: 5 (lower is better)
Translates to: QNLTTPHLSLAVFYLSHLTRIRK*TAKVLR
Trigger: CCTCAAGACTTTGGCTGTCAACTTTCGAATTCGAGT...CAAATGACTAAGATAGAAAACTGCCAAGGACAAATGAGGAGTAGTTAGATTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp GAGATTATACTCACTAATACACGAGTCAGTAGTTTTACTTTCAGGTGGCTTTTTATAAGCACCTTTTTCTaGGGTTTTGGCTCCTTTCGG +
Preference number: 5 (lower is better)
Translates to: EIILTNTRVSSFTFRWLFISTFF*GFGSFR
Trigger: CCGAAAGGAGCCAAAACCCAAGAAAAAGGTGCTTAT...AAAAAGCCACCTGAAAGTAAAACTACTGACTCGTGTATTAGTGAGTATAATCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp ATCTTCATTCCGTCTCTCTTCATCATGCCATTGACTTCAGAAACTCCAGAATTTTTGATATTAATTGGGTaGCAATCTGTAGCCAAGGCA +
Preference number: 5 (lower is better)
Translates to: IFIPSLFIMPLTSETPEFLILIG*QSVAKA
Trigger: TGCCTTGGCTACAGATTGCAACCCAATTAATATCAA...AAATTCTGGAGTTTCTGAAGTCAATGGCATGATGAAGAGAGACGGAATGAAGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp GGGAAAGCTATTATCTCCCTTAATCTGGACACAACTGTTCAAGCAGTCTATAATGTTTTCAGCTTGTATTaGCTCAGAACTTATACCACG +
Preference number: 5 (lower is better)
Translates to: GKAIISLNLDTTVQAVYNVFSLY*LRTYTT
Trigger: CGTGGTATAAGTTCTGAGCAAATACAAGCTGAAAAC...ATTATAGACTGCTTGAACAGTTGTGTCCAGATTAAGGGAGATAATAGCTTTCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp ATTAGAATACTTGAACAGAACAGGAGCCTCATAGCATACCATGCAAGGCTAAAGTTCTTCTTTATCTTTTaGGTGGTGTTCACATTCTGG +
Preference number: 5 (lower is better)
Translates to: IRILEQNRSLIAYHARLKFFFIF*VVFTFW
Trigger: CCAGAATGTGAACACCACCAAAAAGATAAAGAAGAA...CTTTAGCCTTGCATGGTATGCTATGAGGCTCCTGTTCTGTTCAAGTATTCTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp ATTAGAATACTTGAACAGAACAGGAGCCTCATAGCATACCATGCAAGGCTAAAGTACAAAGAACACACATaGGATAGTGGTTTCAGAAGT +
Preference number: 5 (lower is better)
Translates to: IRILEQNRSLIAYHARLKYKEHT*DSGFRS
Trigger: ACTTCTGAAACCACTATCCAATGTGTGTTCTTTGTA...CTTTAGCCTTGCATGGTATGCTATGAGGCTCCTGTTCTGTTCAAGTATTCTAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp CAAAATCTAACTACTCCTCATTTGTCCTTGGCAGTTTTCTATCTTAGTCATTTGTGTAAGAAACTGTCCTaGAGCATCCCTTGTGTTCTC +
Preference number: 5 (lower is better)
Translates to: QNLTTPHLSLAVFYLSHLCKKLS*SIPCVL
Trigger: GAGAACACAAGGGATGCTCAAGGACAGTTTCTTACA...CAAATGACTAAGATAGAAAACTGCCAAGGACAAATGAGGAGTAGTTAGATTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp ATTAGAATACTTGAACAGAACAGGAGCCTCATAGCATACCATGCAAGGCTAAAGGATACAAGAAGGCCTTaGGTTGATATAGTGAATCAA +
Preference number: 5 (lower is better)
Translates to: IRILEQNRSLIAYHARLKDTRRP*VDIVNQ
Trigger: TTGATTCACTATATCAACCAAAGGCCTTCTTGTATC...CTTTAGCCTTGCATGGTATGCTATGAGGCTCCTGTTCTGTTCAAGTATTCTAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp GAGATTATACTCACTAATACACGAGTCAGTAGTTTTACTTTCAGGTGGCTTTTTGCTGCTGATCGAACTTaGACACAATCTTCTACCAGT +
Preference number: 5 (lower is better)
Translates to: EIILTNTRVSSFTFRWLFAADRT*TQSSTS
Trigger: ACTGGTAGAAGATTGTGTCAAAGTTCGATCAGCAGC...AAAAAGCCACCTGAAAGTAAAACTACTGACTCGTGTATTAGTGAGTATAATCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp GGGAAAGCTATTATCTCCCTTAATCTGGACACAACTGTTCAAGCAGTCTATAATGAAGAATTTCACATTTaGTGCCTCCACTGTCCAAAA +
Preference number: 5 (lower is better)
Translates to: GKAIISLNLDTTVQAVYNEEFHI*CLHCPK
Trigger: TTTTGGACAGTGGAGGCACAAAATGTGAAATTCTTC...ATTATAGACTGCTTGAACAGTTGTGTCCAGATTAAGGGAGATAATAGCTTTCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp GGGAAAGCTATTATCTCCCTTAATCTGGACACAACTGTTCAAGCAGTCTATAATTCTTTTCAGGAGAGCTaGCTTGTTTTCAAATTCCGA +
Preference number: 5 (lower is better)
Translates to: GKAIISLNLDTTVQAVYNSFQES*LVFKFR
Trigger: TCGGAATTTGAAAACAAGCAAGCTCTCCTGAAAAGA...ATTATAGACTGCTTGAACAGTTGTGTCCAGATTAAGGGAGATAATAGCTTTCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp TCGAACTTTGACACAATCTTCTACCAGTGTGTTATTCAGGTAGGTCAGCATTATGAAATTCATCTCTGTTaGCATTTGCTAAGGCCAGTA +
Preference number: 5 (lower is better)
Translates to: SNFDTIFYQCVIQVGQHYEIHLC*HLLRPV
Trigger: TACTGGCCTTAGCAAATGCAAACAGAGATGAATTTC...ATAATGCTGACCTACCTGAATAACACACTGGTAGAAGATTGTGTCAAAGTTCGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp GAGATTATACTCACTAATACACGAGTCAGTAGTTTTACTTTCAGGTGGCTTTTTGGAGTAGGAAGGATTTaGCCCTGTTCAAAAGCAACA +
Preference number: 5 (lower is better)
Translates to: EIILTNTRVSSFTFRWLFGVGRI*PCSKAT
Trigger: TGTTGCTTTTGAACAGGGCAAAATCCTTCCTACTCC...AAAAAGCCACCTGAAAGTAAAACTACTGACTCGTGTATTAGTGAGTATAATCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp GGGAAAGCTATTATCTCCCTTAATCTGGACACAACTGTTCAAGCAGTCTATAATCGTTCAGCTACTTTGTaGAAACTCTGGTCAATATCA +
Preference number: 5 (lower is better)
Translates to: GKAIISLNLDTTVQAVYNRSATL*KLWSIS
Trigger: TGATATTGACCAGAGTTTCAACAAAGTAGCTGAACG...ATTATAGACTGCTTGAACAGTTGTGTCCAGATTAAGGGAGATAATAGCTTTCCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp AACTATCTGGCTCCCCTATACTTCTGTAGATTTCTAAGAGAAGATCCTGTAAACACACGTTCAGCTACTTaGTTGAAACTCTGGTCAATA +
Preference number: 5 (lower is better)
Translates to: NYLAPLYFCRFLREDPVNTRSAT*LKLWSI
Trigger: TATTGACCAGAGTTTCAACAAAGTAGCTGAACGTGT...GTTTACAGGATCTTCTCTTAGAAATCTACAGAAGTATAGGGGAGCCAGATAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp GAGATTATACTCACTAATACACGAGTCAGTAGTTTTACTTTCAGGTGGCTTTTTTATGAGCAAATTCACTaGTCCACCAACACTGAGCAC +
Preference number: 5 (lower is better)
Translates to: EIILTNTRVSSFTFRWLFYEQIH*STNTEH
Trigger: GTGCTCAGTGTTGGTGGACAAGTGAATTTGCTCATA...AAAAAGCCACCTGAAAGTAAAACTACTGACTCGTGTATTAGTGAGTATAATCTC
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp CTACTGAACCCAAATATGTCTGTATCACAGCACATTATGAACTCTGGTTTACTTAGTAGCTCTCTTCTTTaGGGGGCTTCTGATATAATC +
Preference number: 5 (lower is better)
Translates to: LLNPNMSVSQHIMNSGLLSSSLL*GASDII
Trigger: GATTATATCAGAAGCCCCCAAAAGAAGAGAGCTACT...AAGTAAACCAGAGTTCATAATGTGCTGTGATACAGACATATTTGGGTTCAGTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530958.5
CDS-3UTR CAA 90 bp CTACTGAACCCAAATATGTCTGTATCACAGCACATTATGAACTCTGGTTTACTTACAAAAATGTTTGCCTaGCTTGCAGTAGTAGCAGGA +
Preference number: 5 (lower is better)
Translates to: LLNPNMSVSQHIMNSGLLTKMFA*LAVVAG
Trigger: TCCTGCTACTACTGCAAGCAAGGCAAACATTTTTGT...AAGTAAACCAGAGTTCATAATGTGCTGTGATACAGACATATTTGGGTTCAGTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530958.5
CDS TCA 90 bp CCACTAAAACTCTATGAACATCTTGTGAAGGTTTCAGATAGAGCCTaGAGTACACAGAGAACAATTCTAACCACTGTTGCTGAGATATTT +
Preference number: 5 (lower is better)
Translates to: PLKLYEHLVKVSDRA*STQRTILTTVAEIF
Trigger: AAATATCTCAGCAACAGTGGTTAGAATTGTTCTCTGTGTACTTCAGGCTCTATCTGAAACCTTCACAAGATGTTCATAGAGTTTTAGTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000278616.9
ENST00000452508.6
ENST00000527805.6
ENST00000675843.1
ENST00000682430.1
ENST00000682516.1
ENST00000682956.1
ENST00000683174.1
ENST00000684037.1
ENST00000684061.1
CDS TCA 90 bp GTAAATAACTTCCAGAATTCTCTGTCAACCTCAACTAAACTACCCTaGATTATGGCTCCAAGTAAGCCAAAGTTTTCAGCTTGTATTTGC +
Preference number: 5 (lower is better)
Translates to: VNNFQNSLSTSTKLP*IMAPSKPKFSACIC
Trigger: GCAAATACAAGCTGAAAACTTTGGCTTACTTGGAGCCATAATTCAGGGTAGTTTAGTTGAGGTTGACAGAGAATTCTGGAAGTTATTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000278616.9
ENST00000452508.6
ENST00000527805.6
ENST00000675595.1
ENST00000675843.1
ENST00000682516.1
ENST00000682956.1
ENST00000683174.1
ENST00000683605.1
ENST00000684037.1
ENST00000684061.1
ENST00000684179.1
CDS CCA 90 bp GTAGGGACAACAACATCTTCTAAATTCTTAAGTTTAGTAATTGGCTaGTCTGCTGGAATATTTATGCCTTCTCATCAAGCTGAGAGCTTT +
Preference number: 5 (lower is better)
Translates to: VGTTTSSKFLSLVIG*SAGIFMPSHQAESF
Trigger: AAAGCTCTCAGCTTGATGAGAAGGCATAAATATTCCAGCAGACCAGCCAATTACTAAACTTAAGAATTTAGAAGATGTTGTTGTCCCTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638786.2
CDS-3UTR CAA 90 bp CTCCTACTTCTGATAGTACATATTATTCTATTTGCAGCCTCTGTTCGATCCTCATATATTTCCTCTCCTTaGTTAGATGCCAAAATGCTC +
Preference number: 5 (lower is better)
Translates to: LLLLIVHIILFAASVRSSYISSP*LDAKML
Trigger: GAGCATTTTGGCATCTAACAAAGGAGAGGAAATATA...TGAGGATCGAACAGAGGCTGCAAATAGAATAATATGTACTATCAGAAGTAGGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp GGGAAAGCTATTATCTCCCTTAATCTGGACACAACTGTTCAAGCAGTCTATAATATTTTCAAAAGCTGTTaGCTGAAGCTTCAAAGGAAG +
Preference number: 5 (lower is better)
Translates to: GKAIISLNLDTTVQAVYNIFKSC*LKLQRK
Trigger: CTTCCTTTGAAGCTTCAGCAAACAGCTTTTGAAAAT...ATTATAGACTGCTTGAACAGTTGTGTCCAGATTAAGGGAGATAATAGCTTTCCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp TGGTCCACCTTAATTTCCATAGTAGGGACAACAACATCTTCTAAATTCTTAAGTCCAGCATTGGATCTGTaGTCATCTTATAAATCTCCC +
Preference number: 5 (lower is better)
Translates to: WSTLISIVGTTTSSKFLSPALDL*SSYKSP
Trigger: GGGAGATTTATAAGATGACAACAGATCCAATGCTGG...ACTTAAGAATTTAGAAGATGTTGTTGTCCCTACTATGGAAATTAAGGTGGACCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp GAGATTATACTCACTAATACACGAGTCAGTAGTTTTACTTTCAGGTGGCTTTTTCCAGCATTGGATCTGTaGTCATCTTATAAATCTCCC +
Preference number: 5 (lower is better)
Translates to: EIILTNTRVSSFTFRWLFPALDL*SSYKSP
Trigger: GGGAGATTTATAAGATGACAACAGATCCAATGCTGG...AAAAAGCCACCTGAAAGTAAAACTACTGACTCGTGTATTAGTGAGTATAATCTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp TGGTCCACCTTAATTTCCATAGTAGGGACAACAACATCTTCTAAATTCTTAAGTCAACTTCTTGATCATTaGCTTGAGAATACTCAGGGC +
Preference number: 5 (lower is better)
Translates to: WSTLISIVGTTTSSKFLSQLLDH*LENTQG
Trigger: GCCCTGAGTATTCTCAAGCAAATGATCAAGAAGTTG...ACTTAAGAATTTAGAAGATGTTGTTGTCCCTACTATGGAAATTAAGGTGGACCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp CAAAATCTAACTACTCCTCATTTGTCCTTGGCAGTTTTCTATCTTAGTCATTTGTCACTGAGATTTCGTTaGCATTCTTGGTCATCTGCA +
Preference number: 5 (lower is better)
Translates to: QNLTTPHLSLAVFYLSHLSLRFR*HSWSSA
Trigger: TGCAGATGACCAAGAATGCAAACGAAATCTCAGTGA...CAAATGACTAAGATAGAAAACTGCCAAGGACAAATGAGGAGTAGTTAGATTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp TTTGTGGCTAAAATGTTTTTCAAACAGGTAACAGCTGCTGATCGAACTTTGACACGTTCAGCTACTTTGTaGAAACTCTGGTCAATATCA +
Preference number: 5 (lower is better)
Translates to: FVAKMFFKQVTAADRTLTRSATL*KLWSIS
Trigger: TGATATTGACCAGAGTTTCAACAAAGTAGCTGAACG...TGTCAAAGTTCGATCAGCAGCTGTTACCTGTTTGAAAAACATTTTAGCCACAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp CTACTGAACCCAAATATGTCTGTATCACAGCACATTATGAACTCTGGTTTACTTAACAGCTTTGTTTTCTaGGTCTCATCCATTCCTATG +
Preference number: 5 (lower is better)
Translates to: LLNPNMSVSQHIMNSGLLNSFVF*VSSIPM
Trigger: CATAGGAATGGATGAGACCAAGAAAACAAAGCTGTT...AAGTAAACCAGAGTTCATAATGTGCTGTGATACAGACATATTTGGGTTCAGTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530958.5
CDS-3UTR CAA 90 bp TACCTACTGAACCCAAATATGTCTGTATCACAGCACATTATGAACTCTGGTTTAACCTCAAAAACAGCTTaGTTTTCTTGGTCTCATCCA +
Preference number: 5 (lower is better)
Translates to: YLLNPNMSVSQHIMNSGLTSKTA*FSWSHP
Trigger: TGGATGAGACCAAGAAAACAAAGCTGTTTTTGAGGT...TAAACCAGAGTTCATAATGTGCTGTGATACAGACATATTTGGGTTCAGTAGGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530958.5
CDS-3UTR CAA 90 bp ATAGACAGATACAGACAGAGTGCTTTCTTTGGTGAAGTTTCATTTCATGAGGAAGTGACTTCCTTGAACTaGTTTTTCTTACCTTCAGCT +
Preference number: 5 (lower is better)
Translates to: IDRYRQSAFFGEVSFHEEVTSLN*FFLPSA
Trigger: AGCTGAAGGTAAGAAAAACAAGTTCAAGGAAGTCAC...TTCCTCATGAAATGAAACTTCACCAAAGAAAGCACTCTGTCTGTATCTGTCTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530958.5
CDS-3UTR CAA 90 bp ATAGACAGATACAGACAGAGTGCTTTCTTTGGTGAAGTTTCATTTCATGAGGAAAAATATACTAAAGATTaGACACTTCCCGGAAGAGGC +
Preference number: 5 (lower is better)
Translates to: IDRYRQSAFFGEVSFHEEKYTKD*TLPGRG
Trigger: GCCTCTTCCGGGAAGTGTCAAATCTTTAGTATATTT...TTCCTCATGAAATGAAACTTCACCAAAGAAAGCACTCTGTCTGTATCTGTCTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530958.5
CDS TCA 90 bp GTACCTGGTGACAGATATCTGCCATCAATTCAATCAAATTTTCTTTaGCGGCAATATTACGAAATCCTGAAGAATACTTTCCTCTACTTC +
Preference number: 5 (lower is better)
Translates to: VPGDRYLPSIQSNFL*RQYYEILKNTFLYF
Trigger: GAAGTAGAGGAAAGTATTCTTCAGGATTTCGTAATATTGCCGTCAAAGAAAATTTGATTGAATTGATGGCAGATATCTGTCACCAGGTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000683100.1
ENST00000684037.1
CDS-3UTR CAA 90 bp GAGATTATACTCACTAATACACGAGTCAGTAGTTTTACTTTCAGGTGGCTTTTTTTGATATTAATTGGGTaGCAATCTGTAGCCAAGGCA +
Preference number: 5 (lower is better)
Translates to: EIILTNTRVSSFTFRWLFLILIG*QSVAKA
Trigger: TGCCTTGGCTACAGATTGCAACCCAATTAATATCAA...AAAAAGCCACCTGAAAGTAAAACTACTGACTCGTGTATTAGTGAGTATAATCTC
37% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp GAGATTATACTCACTAATACACGAGTCAGTAGTTTTACTTTCAGGTGGCTTTTTGTTTTCAGCTTGTATTaGCTCAGAACTTATACCACG +
Preference number: 5 (lower is better)
Translates to: EIILTNTRVSSFTFRWLFVFSLY*LRTYTT
Trigger: CGTGGTATAAGTTCTGAGCAAATACAAGCTGAAAAC...AAAAAGCCACCTGAAAGTAAAACTACTGACTCGTGTATTAGTGAGTATAATCTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp CAAAATCTAACTACTCCTCATTTGTCCTTGGCAGTTTTCTATCTTAGTCATTTGTTATTTGGACTCTTCTaGGTACAGTTGCTCAAGCAA +
Preference number: 5 (lower is better)
Translates to: QNLTTPHLSLAVFYLSHLLFGLF*VQLLKQ
Trigger: TTGCTTGAGCAACTGTACCAAGAAGAGTCCAAATAA...CAAATGACTAAGATAGAAAACTGCCAAGGACAAATGAGGAGTAGTTAGATTTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp GAGATTATACTCACTAATACACGAGTCAGTAGTTTTACTTTCAGGTGGCTTTTTCGGTCAAATGGCTTTTaGATGAAGGATGCTAAACTT +
Preference number: 5 (lower is better)
Translates to: EIILTNTRVSSFTFRWLFRSNGF*MKDAKL
Trigger: AAGTTTAGCATCCTTCATCAAAAAGCCATTTGACCG...AAAAAGCCACCTGAAAGTAAAACTACTGACTCGTGTATTAGTGAGTATAATCTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp GAGATTATACTCACTAATACACGAGTCAGTAGTTTTACTTTCAGGTGGCTTTTTTTCTTGATCATTTGCTaGAGAATACTCAGGGCAAGA +
Preference number: 5 (lower is better)
Translates to: EIILTNTRVSSFTFRWLFFLIIC*RILRAR
Trigger: TCTTGCCCTGAGTATTCTCAAGCAAATGATCAAGAA...AAAAAGCCACCTGAAAGTAAAACTACTGACTCGTGTATTAGTGAGTATAATCTC
37% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp GAGATTATACTCACTAATACACGAGTCAGTAGTTTTACTTTCAGGTGGCTTTTTCTGGCATCCAACTTCTaGATCATTTGCTTGAGAATA +
Preference number: 5 (lower is better)
Translates to: EIILTNTRVSSFTFRWLFLASNF*IICLRI
Trigger: TATTCTCAAGCAAATGATCAAGAAGTTGGATGCCAG...AAAAAGCCACCTGAAAGTAAAACTACTGACTCGTGTATTAGTGAGTATAATCTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp CAAAATCTAACTACTCCTCATTTGTCCTTGGCAGTTTTCTATCTTAGTCATTTGTTCAGGAGAGCTTGCTaGTTTTCAAATTCCGATGAT +
Preference number: 5 (lower is better)
Translates to: QNLTTPHLSLAVFYLSHLFRRAC*FSNSDD
Trigger: ATCATCGGAATTTGAAAACAAGCAAGCTCTCCTGAA...CAAATGACTAAGATAGAAAACTGCCAAGGACAAATGAGGAGTAGTTAGATTTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp TGGTCCACCTTAATTTCCATAGTAGGGACAACAACATCTTCTAAATTCTTAAGTTCTTTTCAGGAGAGCTaGCTTGTTTTCAAATTCCGA +
Preference number: 5 (lower is better)
Translates to: WSTLISIVGTTTSSKFLSSFQES*LVFKFR
Trigger: TCGGAATTTGAAAACAAGCAAGCTCTCCTGAAAAGA...ACTTAAGAATTTAGAAGATGTTGTTGTCCCTACTATGGAAATTAAGGTGGACCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp CAAAATCTAACTACTCCTCATTTGTCCTTGGCAGTTTTCTATCTTAGTCATTTGCATTCTAGCAGCCAATaGGTACATAAGAGGCAAAAA +
Preference number: 5 (lower is better)
Translates to: QNLTTPHLSLAVFYLSHLHSSSQ*VHKRQK
Trigger: TTTTTGCCTCTTATGTACCAATTGGCTGCTAGAATG...CAAATGACTAAGATAGAAAACTGCCAAGGACAAATGAGGAGTAGTTAGATTTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp CAAAATCTAACTACTCCTCATTTGTCCTTGGCAGTTTTCTATCTTAGTCATTTGCGTTCAGCTACTTTGTaGAAACTCTGGTCAATATCA +
Preference number: 5 (lower is better)
Translates to: QNLTTPHLSLAVFYLSHLRSATL*KLWSIS
Trigger: TGATATTGACCAGAGTTTCAACAAAGTAGCTGAACG...CAAATGACTAAGATAGAAAACTGCCAAGGACAAATGAGGAGTAGTTAGATTTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp CAAAATCTAACTACTCCTCATTTGTCCTTGGCAGTTTTCTATCTTAGTCATTTGACACGTTCAGCTACTTaGTTGAAACTCTGGTCAATA +
Preference number: 5 (lower is better)
Translates to: QNLTTPHLSLAVFYLSHLTRSAT*LKLWSI
Trigger: TATTGACCAGAGTTTCAACAAAGTAGCTGAACGTGT...CAAATGACTAAGATAGAAAACTGCCAAGGACAAATGAGGAGTAGTTAGATTTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp GAGATTATACTCACTAATACACGAGTCAGTAGTTTTACTTTCAGGTGGCTTTTTACTCCTCATTTGTCCTaGGCAGTTTTCTATCTTAGT +
Preference number: 5 (lower is better)
Translates to: EIILTNTRVSSFTFRWLFTPHLS*AVFYLS
Trigger: ACTAAGATAGAAAACTGCCAAGGACAAATGAGGAGT...AAAAAGCCACCTGAAAGTAAAACTACTGACTCGTGTATTAGTGAGTATAATCTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS TCA 90 bp AAACCTGGTGACAGATATCTGCCATCAATTCAATCAAATTTTCTTTaGCGGCAATATTACGAAATCCTGAAGAATACTTTCCTCTACTTC +
Preference number: 5 (lower is better)
Translates to: KPGDRYLPSIQSNFL*RQYYEILKNTFLYF
Trigger: GAAGTAGAGGAAAGTATTCTTCAGGATTTCGTAATATTGCCGTCAAAGAAAATTTGATTGAATTGATGGCAGATATCTGTCACCAGGTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000278616.9
ENST00000452508.6
ENST00000527805.6
ENST00000675595.1
ENST00000675843.1
ENST00000682516.1
ENST00000682956.1
ENST00000683174.1
ENST00000683605.1
ENST00000684061.1
ENST00000684179.1
CDS TCA 90 bp ATCCAACTTTTGGAAATCCATGCTACAAATTTGCCTGCGCATGTATaGAATTTGTATGTTCAAGGTTATTCACTACAATACAGCGTTGTT +
Preference number: 5 (lower is better)
Translates to: IQLLEIHATNLPAHV*NLYVQGYSLQYSVV
Trigger: AACAACGCTGTATTGTAGTGAATAACCTTGAACATACAAATTTCATACATGCGCAGGCAAATTTGTAGCATGGATTTCCAAAAGTTGGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525056.2
CDS TCA 90 bp CATTCTCTCACAATGGTTAAAAAGTCCATCTTGTCAAAAGTTGTCTaGAGAAATAGTTCTTCTACTTCATTCTGGCACGCTTTGGAAAAA +
Preference number: 5 (lower is better)
Translates to: HSLTMVKKSILSKVV*RNSSSTSFWHALEK
Trigger: TTTTTCCAAAGCGTGCCAGAATGAAGTAGAAGAACTATTTCTTCAGACAACTTTTGACAAGATGGACTTTTTAACCATTGTGAGAGAATG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533526.1
CDS-3UTR CAA 90 bp TGGTCCACCTTAATTTCCATAGTAGGGACAACAACATCTTCTAAATTCTTAAGTTTCTTCTTTATCTTTTaGGTGGTGTTCACATTCTGG +
Preference number: 5 (lower is better)
Translates to: WSTLISIVGTTTSSKFLSFFFIF*VVFTFW
Trigger: CCAGAATGTGAACACCACCAAAAAGATAAAGAAGAA...ACTTAAGAATTTAGAAGATGTTGTTGTCCCTACTATGGAAATTAAGGTGGACCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527805.6
ENST00000675595.1
CDS-3UTR CAA 90 bp CAAAATCTAACTACTCCTCATTTGTCCTTGGCAGTTTTCTATCTTAGTCATTTGTGTCATTCATTAGCTTaGATGTTAACAATCGCAGGA +
Preference number: 5 (lower is better)
Translates to: QNLTTPHLSLAVFYLSHLCHSLA*MLTIAG
Trigger: TCCTGCGATTGTTAACATCAAAGCTAATGAATGACA...CAAATGACTAAGATAGAAAACTGCCAAGGACAAATGAGGAGTAGTTAGATTTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp GAGATTATACTCACTAATACACGAGTCAGTAGTTTTACTTTCAGGTGGCTTTTTTACAAAGAACACACATaGGATAGTGGTTTCAGAAGT +
Preference number: 5 (lower is better)
Translates to: EIILTNTRVSSFTFRWLFYKEHT*DSGFRS
Trigger: ACTTCTGAAACCACTATCCAATGTGTGTTCTTTGTA...AAAAAGCCACCTGAAAGTAAAACTACTGACTCGTGTATTAGTGAGTATAATCTC
36% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp CAAAATCTAACTACTCCTCATTTGTCCTTGGCAGTTTTCTATCTTAGTCATTTGAGTTTTACAAACATCTaGGTCACGACGATACAAAGA +
Preference number: 5 (lower is better)
Translates to: QNLTTPHLSLAVFYLSHLSFTNI*VTTIQR
Trigger: TCTTTGTATCGTCGTGACCAAGATGTTTGTAAAACT...CAAATGACTAAGATAGAAAACTGCCAAGGACAAATGAGGAGTAGTTAGATTTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp CAAAATCTAACTACTCCTCATTTGTCCTTGGCAGTTTTCTATCTTAGTCATTTGTATATTTCCTCTCCTTaGTTAGATGCCAAAATGCTC +
Preference number: 5 (lower is better)
Translates to: QNLTTPHLSLAVFYLSHLYISSP*LDAKML
Trigger: GAGCATTTTGGCATCTAACAAAGGAGAGGAAATATA...CAAATGACTAAGATAGAAAACTGCCAAGGACAAATGAGGAGTAGTTAGATTTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp GAGATTATACTCACTAATACACGAGTCAGTAGTTTTACTTTCAGGTGGCTTTTTTGGTTTATTGCCATCTaGGATAACTGCAACAAATTG +
Preference number: 5 (lower is better)
Translates to: EIILTNTRVSSFTFRWLFWFIAI*DNCNKL
Trigger: CAATTTGTTGCAGTTATCCAAGATGGCAATAAACCA...AAAAAGCCACCTGAAAGTAAAACTACTGACTCGTGTATTAGTGAGTATAATCTC
36% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp GAGATTATACTCACTAATACACGAGTCAGTAGTTTTACTTTCAGGTGGCTTTTTTCAAAAGGGTTTTCTTaGTCAAATCTGGGTACTTCT +
Preference number: 5 (lower is better)
Translates to: EIILTNTRVSSFTFRWLFSKGFS*SNLGTS
Trigger: AGAAGTACCCAGATTTGACAAAGAAAACCCTTTTGA...AAAAAGCCACCTGAAAGTAAAACTACTGACTCGTGTATTAGTGAGTATAATCTC
36% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS-3UTR CAA 90 bp CAAAATCTAACTACTCCTCATTTGTCCTTGGCAGTTTTCTATCTTAGTCATTTGTCAAAAGGGTTTTCTTaGTCAAATCTGGGTACTTCT +
Preference number: 5 (lower is better)
Translates to: QNLTTPHLSLAVFYLSHLSKGFS*SNLGTS
Trigger: AGAAGTACCCAGATTTGACAAAGAAAACCCTTTTGA...CAAATGACTAAGATAGAAAACTGCCAAGGACAAATGAGGAGTAGTTAGATTTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000452508.6
ENST00000675843.1
CDS GCA 72 bp TCGGAAGGTCAAAGTAGTATCAACCGCGGCGGTGGCTaGAGCGCAGATCCCGACTCCTCTCGCCTCCTCCCG +
Preference number: 6 (lower is better)
Translates to: SEGQSSINRGGG*SADPDSSRLLP
Trigger: CGGGAGGAGGCGAGAGGAGTCGGGATCTGCGCTGCAGCCACCGCCGCGGTTGATACTACTTTGACCTTCCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000527805.6
ENST00000530958.5
ENST00000532931.5
ENST00000675595.1
ENST00000675843.1
ENST00000683174.1
ENST00000683468.1
ENST00000683488.1
CDS GCA 72 bp GCAGAAGCCGCTGCGTTGCCTCCGCGCCCCTACCACTaGACTCGGAAGGTCAAAGTAGTATCAACCGCGGCG +
Preference number: 6 (lower is better)
Translates to: AEAAALPPRPYH*TRKVKVVSTAA
Trigger: CGCCGCGGTTGATACTACTTTGACCTTCCGAGTGCAGTGGTAGGGGCGCGGAGGCAACGCAGCGGCTTCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000530958.5
ENST00000683468.1
ENST00000683488.1
CDS CAA 72 bp CACACGACTGAATTTCCCAGCGCAGAAGCCGCTGCGTaGCCTCCGCGCCCCTACCACTGCACTCGGAAGGTC +
Preference number: 6 (lower is better)
Translates to: HTTEFPSAEAAA*PPRPYHCTRKV
Trigger: GACCTTCCGAGTGCAGTGGTAGGGGCGCGGAGGCAACGCAGCGGCTTCTGCGCTGGGAAATTCAGTCGTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000530958.5
ENST00000683468.1
ENST00000683488.1
CDS GCA 72 bp ACACGACTGAATTTCCCAGCGCAGAAGCCGCTGCGTTaGCTCCGCGCCCCTACCACTGCACTCGGAAGGTCA +
Preference number: 6 (lower is better)
Translates to: TRLNFPAQKPLR*LRAPTTALGRS
Trigger: TGACCTTCCGAGTGCAGTGGTAGGGGCGCGGAGGCAACGCAGCGGCTTCTGCGCTGGGAAATTCAGTCGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000530958.5
ENST00000683468.1
ENST00000683488.1
CDS CAA 90 bp ACTGGGTCGCACACGACTGAATTTCCCAGCGCAGAAGCCGCTGCGTaGCCTCCGCGCCCCTACCACTGCACTCGGAAGGTCAAAGTAGTA +
Preference number: 6 (lower is better)
Translates to: TGSHTTEFPSAEAAA*PPRPYHCTRKVKVV
Trigger: TACTACTTTGACCTTCCGAGTGCAGTGGTAGGGGCGCGGAGGCAACGCAGCGGCTTCTGCGCTGGGAAATTCAGTCGTGTGCGACCCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000530958.5
ENST00000683468.1
ENST00000683488.1
CDS CAA 90 bp GCAGGAGGCAGGGTTCAATTCAGGGCGTTTAAAAGGAGGAGGTTATaGGCCAAGTCCGCTAAGCACCCGGAGAGAGGCCAGGAAAGATGG +
Preference number: 6 (lower is better)
Translates to: AGGRVQFRAFKRRRL*AKSAKHPERGQERW
Trigger: CCATCTTTCCTGGCCTCTCTCCGGGTGCTTAGCGGACTTGGCCAATAACCTCCTCCTTTTAAACGCCCTGAATTGAACCCTGCCTCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000530958.5
ENST00000683468.1
ENST00000683488.1
CDS CCA 72 bp GGGTTCAATTCAGGGCGTTTAAAAGGAGGAGGTTATTaGCCAAGTCCGCTAAGCACCCGGAGAGAGGCCAGG +
Preference number: 6 (lower is better)
Translates to: GFNSGRLKGGGY*PSPLSTRREAR
Trigger: CCTGGCCTCTCTCCGGGTGCTTAGCGGACTTGGCCAATAACCTCCTCCTTTTAAACGCCCTGAATTGAACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000530958.5
ENST00000683468.1
ENST00000683488.1
CDS CAA 72 bp AGGGTTCAATTCAGGGCGTTTAAAAGGAGGAGGTTATaGGCCAAGTCCGCTAAGCACCCGGAGAGAGGCCAG +
Preference number: 6 (lower is better)
Translates to: RVQFRAFKRRRL*AKSAKHPERGQ
Trigger: CTGGCCTCTCTCCGGGTGCTTAGCGGACTTGGCCAATAACCTCCTCCTTTTAAACGCCCTGAATTGAACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000530958.5
ENST00000683468.1
ENST00000683488.1
CDS GCA 72 bp GGTGTTCAGCAGCATCCCTGGCCTCTACCCAGTAGATaGCAATACTATCCTCATCTCCCATCCCCAATTGTG +
Preference number: 6 (lower is better)
Translates to: GVQQHPWPLPSR*QYYPHLPSPIV
Trigger: CACAATTGGGGATGGGAGATGAGGATAGTATTGGCATCTACTGGGTAGAGGCCAGGGATGCTGCTGAACACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682569.1
CDS CCA 72 bp CCTGAAGAAGGTCTGAATCCAAGTTTGCAGGGGTTGTaGATCGGCTCGTTTGCGAGAAGTGTCGAAGACAGC +
Preference number: 6 (lower is better)
Translates to: PEEGLNPSLQGL*IGSFARSVEDS
Trigger: GCTGTCTTCGACACTTCTCGCAAACGAGCCGATCCACAACCCCTGCAAACTTGGATTCAGACCTTCTTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529588.5
CDS CAA 90 bp TTTGAACCCAGGAGGCGGAAAGTGCAGTTAGCTGAGATCACGCAATaGCACTCCAGCATGGGCGACAGAGCGAGACCTCATGAAGTCATA +
Preference number: 6 (lower is better)
Translates to: FEPRRRKVQLAEITQ*HSSMGDRARPHEVI
Trigger: TATGACTTCATGAGGTCTCGCTCTGTCGCCCATGCTGGAGTGCAATTGCGTGATCTCAGCTAACTGCACTTTCCGCCTCCTGGGTTCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640388.1
CDS CCA 72 bp GATGGGAAGAACAGAGACTGGGGACTGTTTGAGGGTTaGAAAGAAAGGGAGGTATGGCTTGAAGGGCTACCT +
Preference number: 6 (lower is better)
Translates to: DGKNRDWGLFEG*KEREVWLEGLP
Trigger: AGGTAGCCCTTCAAGCCATACCTCCCTTTCTTTCCAACCCTCAAACAGTCCCCAGTCTCTGTTCTTCCCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000530958.5
ENST00000683468.1
ENST00000683488.1
CDS CCA 72 bp ATTCTTCCTCAGCCCAGGCTGTCTCAAGGTATAGATTaGGATGTGGGAACTGGAGAGCACCAGCAAGCCTAT +
Preference number: 6 (lower is better)
Translates to: ILPQPRLSQGID*DVGTGEHQQAY
Trigger: ATAGGCTTGCTGGTGCTCTCCAGTTCCCACATCCCAATCTATACCTTGAGACAGCCTGGGCTGAGGAAGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682569.1
CDS CAA 72 bp GTTCCTGAAGAAGGTCTGAATCCAAGTTTGCAGGGGTaGTGGATCGGCTCGTTTGCGAGAAGTGTCGAAGAC +
Preference number: 6 (lower is better)
Translates to: VPEEGLNPSLQG*WIGSFARSVED
Trigger: GTCTTCGACACTTCTCGCAAACGAGCCGATCCACAACCCCTGCAAACTTGGATTCAGACCTTCTTCAGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529588.5
CDS TCA 72 bp GGTGTACGTTCCCCATGTCGCTGTTGGGGTAGAAGCTaGGATAGTATCATCAGTAATGGAGACAGCTCACAG +
Preference number: 6 (lower is better)
Translates to: GVRSPCRCWGRS*DSIISNGDSSQ
Trigger: CTGTGAGCTGTCTCCATTACTGATGATACTATCTCAGCTTCTACCCCAACAGCGACATGGGGAACGTACACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000278616.9
ENST00000452508.6
ENST00000527805.6
ENST00000675595.1
ENST00000675843.1
ENST00000682516.1
ENST00000682956.1
ENST00000683174.1
ENST00000683605.1
ENST00000684037.1
ENST00000684061.1
ENST00000684179.1
CDS GCA 72 bp TCCAGACATTGCCAACTGTCCTCTAGGGGACAAAACTaGTCTTGGCTAAGCATCACTGAGTTAGAGGGAGAG +
Preference number: 6 (lower is better)
Translates to: SRHCQLSSRGQN*SWLSITELEGE
Trigger: CTCTCCCTCTAACTCAGTGATGCTTAGCCAAGAGCAGTTTTGTCCCCTAGAGGACAGTTGGCAATGTCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000682569.1
CDS CAA 72 bp AGGCCTCACGCTGGAGCTTCAGGGTCCTTCTACACTTaGTGCCTTTACACGCATTTTTCCTTCCATCTGGAA +
Preference number: 6 (lower is better)
Translates to: RPHAGASGSFYT*CLYTHFSFHLE
Trigger: TTCCAGATGGAAGGAAAAATGCGTGTAAAGGCACAAAGTGTAGAAGGACCCTGAAGCTCCAGCGTGAGGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000530958.5
ENST00000683468.1
ENST00000683488.1
CDS CAA 72 bp CCTTCTCTCTCTACTCTTAACCCTGGGTTAGTGTATTaGCTTTGTAGGGCCCAATTCTTCCTCAGCCCAGGC +
Preference number: 6 (lower is better)
Translates to: PSLSTLNPGLVY*LCRAQFFLSPG
Trigger: GCCTGGGCTGAGGAAGAATTGGGCCCTACAAAGCAAATACACTAACCCAGGGTTAAGAGTAGAGAGAGAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682569.1
CDS CAA 90 bp TCACTAAGCAGGTACATGTCTGTGGGACACCACTGTAGACAAACCTaGGGGACACCAATGCCTCTACTTTATCCAGTGTGTATGCTGGGT +
Preference number: 6 (lower is better)
Translates to: SLSRYMSVGHHCRQT*GTPMPLLYPVCMLG
Trigger: ACCCAGCATACACACTGGATAAAGTAGAGGCATTGGTGTCCCCAAGGTTTGTCTACAGTGGTGTCCCACAGACATGTACCTGCTTAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684447.1
CDS TCA 72 bp GGTTGCCAGGATCTAGGAGATGCAGGGAATTGGGACTaGATGCTAAGAAGGGATGAGGTTTCTTTTGGGATG +
Preference number: 6 (lower is better)
Translates to: GCQDLGDAGNWD*MLRRDEVSFGM
Trigger: CATCCCAAAAGAAACCTCATCCCTTCTTAGCATTCAGTCCCAATTCCCTGCATCTCCTAGATCCTGGCAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683100.1
CDS GCA 72 bp CATATCATAGACCTTGGTAGCAGTCTCTCTTTGCTGTaGCATCCCACTGTCTCTGGTACCCTCATAGGCAAA +
Preference number: 6 (lower is better)
Translates to: HIIDLGSSLSLL*HPTVSGTLIGK
Trigger: TTTGCCTATGAGGGTACCAGAGACAGTGGGATGGCACAGCAAAGAGAGACTGCTACCAAGGTCTATGATATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000278616.9
ENST00000452508.6
ENST00000527805.6
ENST00000675595.1
ENST00000675843.1
ENST00000682289.1
ENST00000683174.1
CDS CCA 72 bp GGTACATGTCTGTGGGACACCACTGTAGACAAACCTTaGGGACACCAATGCCTCTACTTTATCCAGTGTGTA +
Preference number: 6 (lower is better)
Translates to: GTCLWDTTVDKP*GHQCLYFIQCV
Trigger: TACACACTGGATAAAGTAGAGGCATTGGTGTCCCCAAGGTTTGTCTACAGTGGTGTCCCACAGACATGTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684447.1
CDS CCA 72 bp ATTGAAGGTCAAGCAGGAATAGTCAGCAGATACCACTaGCCCCAACTTGTTGCTAATCTGTGGTTCAGGCTC +
Preference number: 6 (lower is better)
Translates to: IEGQAGIVSRYH*PQLVANLWFRL
Trigger: GAGCCTGAACCACAGATTAGCAACAAGTTGGGGCCAGTGGTATCTGCTGACTATTCCTGCTTGACCTTCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684447.1
CDS CAA 72 bp AGGTACATGTCTGTGGGACACCACTGTAGACAAACCTaGGGGACACCAATGCCTCTACTTTATCCAGTGTGT +
Preference number: 6 (lower is better)
Translates to: RYMSVGHHCRQT*GTPMPLLYPVC
Trigger: ACACACTGGATAAAGTAGAGGCATTGGTGTCCCCAAGGTTTGTCTACAGTGGTGTCCCACAGACATGTACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684447.1
CDS CAA 90 bp CAATGTCATCTTTGTTCCCTGCGTAACTTCTTCCCAGACTTCTACTaGAGTGCCATCCCAAATTCTAAGGCTAGCTGCGATCCACATCCC +
Preference number: 6 (lower is better)
Translates to: QCHLCSLRNFFPDFY*SAIPNSKASCDPHP
Trigger: GGGATGTGGATCGCAGCTAGCCTTAGAATTTGGGATGGCACTCAAGTAGAAGTCTGGGAAGAAGTTACGCAGGGAACAAAGATGACATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533733.6
CDS CAA 90 bp GGTATAGATTGGGATGTGGGAACTGGAGAGCACCAGCAAGCCTATTaGGACCTCACTCCTAAGCCGTCTTCTCCAATAGTTTTATCAGTA +
Preference number: 6 (lower is better)
Translates to: GIDWDVGTGEHQQAY*DLTPKPSSPIVLSV
Trigger: TACTGATAAAACTATTGGAGAAGACGGCTTAGGAGTGAGGTCCAAATAGGCTTGCTGGTGCTCTCCAGTTCCCACATCCCAATCTATACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682569.1
CDS CAA 90 bp ACTTTCTTTCCTTCTCTCTCTACTCTTAACCCTGGGTTAGTGTATTaGCTTTGTAGGGCCCAATTCTTCCTCAGCCCAGGCTGTCTCAAG +
Preference number: 6 (lower is better)
Translates to: TFFPSLSTLNPGLVY*LCRAQFFLSPGCLK
Trigger: CTTGAGACAGCCTGGGCTGAGGAAGAATTGGGCCCTACAAAGCAAATACACTAACCCAGGGTTAAGAGTAGAGAGAGAAGGAAAGAAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682569.1
CDS TCA 72 bp TTATCTTCACAAGACAGTAGAGAGCGGCCACACGACTaGCAGAATTCCAATTCCAGCCGTATGATTCCAGAG +
Preference number: 6 (lower is better)
Translates to: LSSQDSRERPHD*QNSNSSRMIPE
Trigger: CTCTGGAATCATACGGCTGGAATTGGAATTCTGTCAGTCGTGTGGCCGCTCTCTACTGTCTTGTGAAGATAA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000278616.9
ENST00000526567.5
ENST00000530958.5
ENST00000683150.1
ENST00000683468.1
ENST00000683488.1
CDS TCA 72 bp TTTGTTCCCTGCGTAACTTCTTCCCAGACTTCTACTTaGGTGCCATCCCAAATTCTAAGGCTAGCTGCGATC +
Preference number: 6 (lower is better)
Translates to: FVPCVTSSQTST*VPSQILRLAAI
Trigger: GATCGCAGCTAGCCTTAGAATTTGGGATGGCACTCAAGTAGAAGTCTGGGAAGAAGTTACGCAGGGAACAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533733.6
CDS CCA 72 bp AGAAGACAGCGATCCAGTGATTCCTTGAGATTCTGGTaGACAGAGAAGCCAATACTGGACTGGTGCTTTTCT +
Preference number: 6 (lower is better)
Translates to: RRQRSSDSLRFW*TEKPILDWCFS
Trigger: AGAAAAGCACCAGTCCAGTATTGGCTTCTCTGTCCACCAGAATCTCAAGGAATCACTGGATCGCTGTCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000278616.9
ENST00000452508.6
ENST00000527805.6
ENST00000675595.1
ENST00000675843.1
ENST00000682516.1
ENST00000683174.1
ENST00000683605.1
ENST00000684037.1
ENST00000684061.1
CDS CAA 72 bp TCTGATAATCCCAGAAGACAGCGATCCAGTGATTCCTaGAGATTCTGGTGGACAGAGAAGCCAATACTGGAC +
Preference number: 6 (lower is better)
Translates to: SDNPRRQRSSDS*RFWWTEKPILD
Trigger: GTCCAGTATTGGCTTCTCTGTCCACCAGAATCTCAAGGAATCACTGGATCGCTGTCTTCTGGGATTATCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000278616.9
ENST00000452508.6
ENST00000527805.6
ENST00000675595.1
ENST00000675843.1
ENST00000682516.1
ENST00000683174.1
ENST00000683605.1
ENST00000684037.1
ENST00000684061.1
CDS CAA 72 bp CTTTGTTCCCTGCGTAACTTCTTCCCAGACTTCTACTaGAGTGCCATCCCAAATTCTAAGGCTAGCTGCGAT +
Preference number: 6 (lower is better)
Translates to: LCSLRNFFPDFY*SAIPNSKASCD
Trigger: ATCGCAGCTAGCCTTAGAATTTGGGATGGCACTCAAGTAGAAGTCTGGGAAGAAGTTACGCAGGGAACAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533733.6
CDS CAA 90 bp CCCAAACAGGAAAATCCACAAAAACCAAGATTGATTAGTGGCTGGTaGCCAGGATCTAGGAGATGCAGGGAATTGGGACTGAATGCTAAG +
Preference number: 6 (lower is better)
Translates to: PKQENPQKPRLISGW*PGSRRCRELGLNAK
Trigger: CTTAGCATTCAGTCCCAATTCCCTGCATCTCCTAGATCCTGGCAACCAGCCACTAATCAATCTTGGTTTTTGTGGATTTTCCTGTTTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000683100.1
CDS TCA 72 bp CTCATGGTTCACAATTTCAGAACACACATCACTGTCTaGGTGACAGGATCATTCGTACACCAAGCCTCAGCA +
Preference number: 6 (lower is better)
Translates to: LMVHNFRTHITV*VTGSFVHQASA
Trigger: TGCTGAGGCTTGGTGTACGAATGATCCTGTCACTCAGACAGTGATGTGTGTTCTGAAATTGTGAACCATGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639953.1
CDS TCA 72 bp TTCCCCAGTACCAAAGGCAAGGTGAAATGGGACACTTaGCACTGCGAAAACAGTGGACTGAGTTATAACAGA +
Preference number: 6 (lower is better)
Translates to: FPSTKGKVKWDT*HCENSGLSYNR
Trigger: TCTGTTATAACTCAGTCCACTGTTTTCGCAGTGTCAAGTGTCCCATTTCACCTTGCCTTTGGTACTGGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683100.1
CDS GCA 72 bp CACTGTCTGGTAAATACAGCAGCTAACGCTCACGAGTaGTCACCACAGGTCAAGATTATCTCACTTATCTTC +
Preference number: 6 (lower is better)
Translates to: HCLVNTAANAHE*SPQVKIISLIF
Trigger: GAAGATAAGTGAGATAATCTTGACCTGTGGTGAGCACTCGTGAGCGTTAGCTGCTGTATTTACCAGACAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278616.9
ENST00000526567.5
ENST00000683150.1
CDS GCA 72 bp CTGTACCTGGTAAATACAGCAGCTAACGCTCACGAGTaGTCACCACAGGTCAAGATTATCTCACTTATCTTC +
Preference number: 6 (lower is better)
Translates to: LYLVNTAANAHE*SPQVKIISLIF
Trigger: GAAGATAAGTGAGATAATCTTGACCTGTGGTGAGCACTCGTGAGCGTTAGCTGCTGTATTTACCAGGTACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000530958.5
ENST00000683468.1
ENST00000683488.1
CDS CCA 72 bp CATTGCCAACTGTCCTCTAGGGGACAAAACTGCTCTTaGCTAAGCATCACTGAGTTAGAGGGAGAGATATAT +
Preference number: 6 (lower is better)
Translates to: HCQLSSRGQNCS*LSITELEGEIY
Trigger: ATATATCTCTCCCTCTAACTCAGTGATGCTTAGCCAAGAGCAGTTTTGTCCCCTAGAGGACAGTTGGCAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000682569.1
CDS CCA 72 bp CAGGAAAATCCACAAAAACCAAGATTGATTAGTGGCTaGTTGCCAGGATCTAGGAGATGCAGGGAATTGGGA +
Preference number: 6 (lower is better)
Translates to: QENPQKPRLISG*LPGSRRCRELG
Trigger: TCCCAATTCCCTGCATCTCCTAGATCCTGGCAACCAGCCACTAATCAATCTTGGTTTTTGTGGATTTTCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000683100.1
CDS CAA 72 bp TTTAAGCATATCATAGACCTTGGTAGCAGTCTCTCTTaGCTGTGCCATCCCACTGTCTCTGGTACCCTCATA +
Preference number: 6 (lower is better)
Translates to: FKHIIDLGSSLS*LCHPTVSGTLI
Trigger: TATGAGGGTACCAGAGACAGTGGGATGGCACAGCAAAGAGAGACTGCTACCAAGGTCTATGATATGCTTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000278616.9
ENST00000452508.6
ENST00000527805.6
ENST00000675595.1
ENST00000675843.1
ENST00000682289.1
ENST00000683174.1
CDS CAA 72 bp CTCCCAGTAATGATGGTAGCCAGACTACCTTCATTTTaGCATCAGTTCCCCAGTACCAAAGGCAAGGTGAAA +
Preference number: 6 (lower is better)
Translates to: LPVMMVARLPSF*HQFPSTKGKVK
Trigger: TTTCACCTTGCCTTTGGTACTGGGGAACTGATGCAAAAATGAAGGTAGTCTGGCTACCATCATTACTGGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683100.1
CDS TCA 72 bp ACCAGTATCATACAAATAAGCCAGTCACATGGTAGTTaGTGGGGGAGGGGAACAAACATCATGCACACTTCA +
Preference number: 6 (lower is better)
Translates to: TSIIQISQSHGS*WGRGTNIMHTS
Trigger: TGAAGTGTGCATGATGTTTGTTCCCCTCCCCCATCAACTACCATGTGACTGGCTTATTTGTATGATACTGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000682569.1
CDS GCA 72 bp GGCACCTATGGTACTTTGGCTCTCTCCAGGTTCGTTTaGATCACTAACACTACTATCAGGGTAATCGTTAAA +
Preference number: 6 (lower is better)
Translates to: GTYGTLALSRFV*ITNTTIRVIVK
Trigger: TTTAACGATTACCCTGATAGTAGTGTTAGTGATGCAAACGAACCTGGAGAGAGCCAAAGTACCATAGGTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000278616.9
ENST00000452508.6
ENST00000527805.6
ENST00000675595.1
ENST00000675843.1
ENST00000683174.1
CDS CAA 72 bp TGGATAGTGGTTTCAGAAGTTCAAGAACATCTTCCATaGGCAAGGGGTACTCTTCTCCAGGAAGCTCCTTTA +
Preference number: 6 (lower is better)
Translates to: WIVVSEVQEHLP*ARGTLLQEAPL
Trigger: TAAAGGAGCTTCCTGGAGAAGAGTACCCCTTGCCAATGGAAGATGTTCTTGAACTTCTGAAACCACTATCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000278616.9
ENST00000452508.6
ENST00000527805.6
ENST00000675595.1
ENST00000675843.1
ENST00000682516.1
ENST00000683174.1
ENST00000684037.1
CDS CAA 72 bp AAGGTCCAAATACGAGGAGAAAGCTCAATCACCCATTaGTTAATCTCCGCAGCTGGGATGAACATTTTCCTG +
Preference number: 6 (lower is better)
Translates to: KVQIRGESSITH*LISAAGMNIFL
Trigger: CAGGAAAATGTTCATCCCAGCTGCGGAGATTAACAAATGGGTGATTGAGCTTTCTCCTCGTATTTGGACCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278616.9
CDS TCA 72 bp GACTTTTGTGAGCTTTCTAGGTTTGACCTCTTGTCTTaGCACAATGCAACTTCCGTAAGGCATCGTAACACA +
Preference number: 6 (lower is better)
Translates to: DFCELSRFDLLS*HNATSVRHRNT
Trigger: TGTGTTACGATGCCTTACGGAAGTTGCATTGTGTCAAGACAAGAGGTCAAACCTAGAAAGCTCACAAAAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000278616.9
ENST00000452508.6
ENST00000527805.6
ENST00000675595.1
ENST00000675843.1
ENST00000682516.1
ENST00000682956.1
ENST00000683174.1
ENST00000683605.1
ENST00000684037.1
ENST00000684061.1
ENST00000684179.1
CDS TCA 72 bp TCTAAATCTGGGTGGATCCAGAAAGGTATAATTTGTTaGAACCTCCTCAAAACCCAAGGTTTGGTGCTGCGT +
Preference number: 6 (lower is better)
Translates to: SKSGWIQKGIIC*NLLKTQGLVLR
Trigger: ACGCAGCACCAAACCTTGGGTTTTGAGGAGGTTTCAACAAATTATACCTTTCTGGATCCACCCAGATTTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682569.1
CDS GCA 72 bp AACAAATTGACAACTAGTTTCACCATAATCCCATCTTaGGGATTATCTGTAATCCCTGCTCCTTGGGAGGCT +
Preference number: 6 (lower is better)
Translates to: NKLTTSFTIIPS*GLSVIPAPWEA
Trigger: AGCCTCCCAAGGAGCAGGGATTACAGATAATCCGCAAGATGGGATTATGGTGAAACTAGTTGTCAATTTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683174.1
CDS CAA 72 bp CAGATGCATGTATCCTCTAACCCAGCAATCCAACTTTaGGAAATCCATGCTACAAATTTGCCTGCGCATGTA +
Preference number: 6 (lower is better)
Translates to: QMHVSSNPAIQL*EIHATNLPAHV
Trigger: TACATGCGCAGGCAAATTTGTAGCATGGATTTCCAAAAGTTGGATTGCTGGGTTAGAGGATACATGCATCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525056.2
CDS CAA 72 bp GCCAAAGGGTTCTACAATGTTAAAGAACACAGTATGTaGGCGGAACTGAAAGAAGGCAGAGGAACTATTAGG +
Preference number: 6 (lower is better)
Translates to: AKGFYNVKEHSM*AELKEGRGTIR
Trigger: CCTAATAGTTCCTCTGCCTTCTTTCAGTTCCGCCAACATACTGTGTTCTTTAACATTGTAGAACCCTTTGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000530958.5
ENST00000683468.1
ENST00000683488.1
CDS CAA 72 bp TGTCTAACTACCCTGGCTAGAACCTCCAACATAATGTaGAAAAGGAGTGGTGAGAGTGCACATCCTTATCTT +
Preference number: 6 (lower is better)
Translates to: CLTTLARTSNIM*KRSGESAHPYL
Trigger: AAGATAAGGATGTGCACTCTCACCACTCCTTTTCAACATTATGTTGGAGGTTCTAGCCAGGGTAGTTAGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683100.1
CDS CAA 72 bp CTGGTCAACAGAACATCAGCAAGACACATCTCCCCCTaGAAAACTTCACGTAGTGTTCTGCATATTGGATAT +
Preference number: 6 (lower is better)
Translates to: LVNRTSARHISP*KTSRSVLHIGY
Trigger: ATATCCAATATGCAGAACACTACGTGAAGTTTTCAAGGGGGAGATGTGTCTTGCTGATGTTCTGTTGACCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000683100.1
CDS TCA 72 bp TGCCAAAATGCTCCAATTACTGTAAGAAACTGTCCTTaGGCATCCCTTGTGTTCTCAGAGTCCATATTGCTT +
Preference number: 6 (lower is better)
Translates to: CQNAPITVRNCP*ASLVFSESILL
Trigger: AAGCAATATGGACTCTGAGAACACAAGGGATGCTCAAGGACAGTTTCTTACAGTAATTGGAGCATTTTGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000278616.9
ENST00000452508.6
ENST00000527805.6
ENST00000675595.1
ENST00000675843.1
ENST00000683174.1
CDS TCA 72 bp TTGGGAGGAACTAAAAGACCAGGTCCAATCTTCCTATaGAGGAAGGAATGTCTCTTACAAAATGAATGCCCT +
Preference number: 6 (lower is better)
Translates to: LGGTKRPGPIFL*RKECLLQNECP
Trigger: AGGGCATTCATTTTGTAAGAGACATTCCTTCCTTCATAGGAAGATTGGACCTGGTCTTTTAGTTCCTCCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000530958.5
ENST00000683468.1
ENST00000683488.1
CDS TCA 72 bp GCACTCTTGCTTATATGGAGAGACATGTCATTTTGCTaGGCCAAAGGCTTAAAACATGCTTTGGAGCTGATA +
Preference number: 6 (lower is better)
Translates to: ALLLIWRDMSFC*AKGLKHALELI
Trigger: TATCAGCTCCAAAGCATGTTTTAAGCCTTTGGCTCAGCAAAATGACATGTCTCTCCATATAAGCAAGAGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000530958.5
ENST00000683468.1
ENST00000683488.1
CDS TCA 72 bp TGGTCAACAGAACATCAGCAAGACACATCTCCCCCTTaGAAACTTCACGTAGTGTTCTGCATATTGGATATT +
Preference number: 6 (lower is better)
Translates to: WSTEHQQDTSPP*KLHVVFCILDI
Trigger: AATATCCAATATGCAGAACACTACGTGAAGTTTTCAAGGGGGAGATGTGTCTTGCTGATGTTCTGTTGACCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000683100.1
CDS GCA 72 bp TATTTGACCAAACTACTGATTTCCTGCATCTTTTTCTaGCTGGAGGCTTGTGTTGAGGCTGATACATTTGGT +
Preference number: 6 (lower is better)
Translates to: YLTKLLISCIFF*LEACVEADTFG
Trigger: ACCAAATGTATCAGCCTCAACACAAGCCTCCAGGCAGAAAAAGATGCAGGAAATCAGTAGTTTGGTCAAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 26 transcripts:
ENST00000278616.9
ENST00000452508.6
ENST00000526567.5
ENST00000527805.6
ENST00000530958.5
ENST00000601453.2
ENST00000638443.1
ENST00000639240.1
ENST00000639953.1
ENST00000640388.1
ENST00000675595.1
ENST00000675843.1
ENST00000682147.1
ENST00000682430.1
ENST00000682465.1
ENST00000682516.1
ENST00000682956.1
ENST00000683150.1
ENST00000683174.1
ENST00000683468.1
ENST00000683488.1
ENST00000683914.1
ENST00000684029.1
ENST00000684037.1
ENST00000684061.1
ENST00000684179.1
CDS CAA 72 bp ATGCCAAAATGCTCCAATTACTGTAAGAAACTGTCCTaGAGCATCCCTTGTGTTCTCAGAGTCCATATTGCT +
Preference number: 6 (lower is better)
Translates to: MPKCSNYCKKLS*SIPCVLRVHIA
Trigger: AGCAATATGGACTCTGAGAACACAAGGGATGCTCAAGGACAGTTTCTTACAGTAATTGGAGCATTTTGGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000278616.9
ENST00000452508.6
ENST00000527805.6
ENST00000675595.1
ENST00000675843.1
ENST00000683174.1
CDS CAA 72 bp CCTCCAGGACCATTAAATACTGTGGAGAAACTGAGCTaGATTACATGTAGCTTGTCCGTTAAGTTCAAGGTT +
Preference number: 6 (lower is better)
Translates to: PPGPLNTVEKLS*ITCSLSVKFKV
Trigger: AACCTTGAACTTAACGGACAAGCTACATGTAATCAAGCTCAGTTTCTCCACAGTATTTAATGGTCCTGGAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682569.1
CDS CAA 90 bp CATTTTAGCCTAGGTGCTCTTCTGTTTGCACATTTGATGAAGTATTaGACCAAACTACTGATTTCCTGCATCTTTTTCTGCCTGGAGGCT +
Preference number: 6 (lower is better)
Translates to: HFSLGALLFAHLMKY*TKLLISCIFFCLEA
Trigger: AGCCTCCAGGCAGAAAAAGATGCAGGAAATCAGTAGTTTGGTCAAATACTTCATCAAATGTGCAAACAGAAGAGCACCTAGGCTAAAATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENST00000278616.9
ENST00000452508.6
ENST00000527805.6
ENST00000530958.5
ENST00000601453.2
ENST00000675843.1
ENST00000682147.1
ENST00000682430.1
ENST00000682516.1
ENST00000682956.1
ENST00000683174.1
ENST00000684029.1
ENST00000684037.1
ENST00000684061.1
CDS CAA 90 bp AACACACATTGGATAGTGGTTTCAGAAGTTCAAGAACATCTTCCATaGGCAAGGGGTACTCTTCTCCAGGAAGCTCCTTTAAAAGCATTA +
Preference number: 6 (lower is better)
Translates to: NTHWIVVSEVQEHLP*ARGTLLQEAPLKAL
Trigger: TAATGCTTTTAAAGGAGCTTCCTGGAGAAGAGTACCCCTTGCCAATGGAAGATGTTCTTGAACTTCTGAAACCACTATCCAATGTGTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000278616.9
ENST00000452508.6
ENST00000527805.6
ENST00000675595.1
ENST00000675843.1
ENST00000682516.1
ENST00000683174.1
ENST00000684037.1
CDS CAA 90 bp GGACCATTAAATACTGTGGAGAAACTGAGCTTGATTACATGTAGCTaGTCCGTTAAGTTCAAGGTTTCCTATGTGACTTCAAGTTGGGCA +
Preference number: 6 (lower is better)
Translates to: GPLNTVEKLSLITCS*SVKFKVSYVTSSWA
Trigger: TGCCCAACTTGAAGTCACATAGGAAACCTTGAACTTAACGGACAAGCTACATGTAATCAAGCTCAGTTTCTCCACAGTATTTAATGGTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682569.1
CDS CAA 90 bp TTTGAGTGTCCTCCAGGACCATTAAATACTGTGGAGAAACTGAGCTaGATTACATGTAGCTTGTCCGTTAAGTTCAAGGTTTCCTATGTG +
Preference number: 6 (lower is better)
Translates to: FECPPGPLNTVEKLS*ITCSLSVKFKVSYV
Trigger: CACATAGGAAACCTTGAACTTAACGGACAAGCTACATGTAATCAAGCTCAGTTTCTCCACAGTATTTAATGGTCCTGGAGGACACTCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682569.1
CDS CAA 90 bp GTGGGAAGAATTTCATCTCCTAATTCACACACTCGAATTCGAAAGTaGACAGCCAAAGTCTTGAGGAAGATAGTAAGAGCTGCTAAGATA +
Preference number: 6 (lower is better)
Translates to: VGRISSPNSHTRIRK*TAKVLRKIVRAAKI
Trigger: TATCTTAGCAGCTCTTACTATCTTCCTCAAGACTTTGGCTGTCAACTTTCGAATTCGAGTGTGTGAATTAGGAGATGAAATTCTTCCCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000278616.9
ENST00000452508.6
ENST00000527805.6
ENST00000675595.1
ENST00000675843.1
ENST00000682430.1
ENST00000682516.1
ENST00000682956.1
ENST00000683100.1
ENST00000683174.1
ENST00000683605.1
ENST00000684037.1
ENST00000684061.1
ENST00000684179.1
CDS CAA 90 bp ATGATTCTACAGGGCATTCCAGTATTACAAGGTTGGAACACTTTTTaGCTGCTATCTGTATACAGTTTCTCAGTAAATCTGCAGGTTGGG +
Preference number: 6 (lower is better)
Translates to: MILQGIPVLQGWNTF*LLSVYSFSVNLQVG
Trigger: CCCAACCTGCAGATTTACTGAGAAACTGTATACAGATAGCAGCAAAAAAGTGTTCCAACCTTGTAATACTGGAATGCCCTGTAGAATCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000682569.1
CDS CAA 90 bp TATTTTTCTTGTCTAACTACCCTGGCTAGAACCTCCAACATAATGTaGAAAAGGAGTGGTGAGAGTGCACATCCTTATCTTGTTCCCAAT +
Preference number: 6 (lower is better)
Translates to: YFSCLTTLARTSNIM*KRSGESAHPYLVPN
Trigger: ATTGGGAACAAGATAAGGATGTGCACTCTCACCACTCCTTTTCAACATTATGTTGGAGGTTCTAGCCAGGGTAGTTAGACAAGAAAAATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000683100.1
CDS CAA 90 bp TTAACTTTCCTGGTCAACAGAACATCAGCAAGACACATCTCCCCCTaGAAAACTTCACGTAGTGTTCTGCATATTGGATATTCAGAAAGT +
Preference number: 6 (lower is better)
Translates to: LTFLVNRTSARHISP*KTSRSVLHIGYSES
Trigger: ACTTTCTGAATATCCAATATGCAGAACACTACGTGAAGTTTTCAAGGGGGAGATGTGTCTTGCTGATGTTCTGTTGACCAGGAAAGTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000683100.1
CDS TCA 72 bp TTCCAGAATTCTCTGTCAACCTCAACTAAACTACCCTaGATTATGGCTCCAAGTAAGCCAAAGTTTTCAGCT +
Preference number: 6 (lower is better)
Translates to: FQNSLSTSTKLP*IMAPSKPKFSA
Trigger: AGCTGAAAACTTTGGCTTACTTGGAGCCATAATTCAGGGTAGTTTAGTTGAGGTTGACAGAGAATTCTGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000278616.9
ENST00000452508.6
ENST00000527805.6
ENST00000675595.1
ENST00000675843.1
ENST00000682516.1
ENST00000682956.1
ENST00000683174.1
ENST00000683605.1
ENST00000684037.1
ENST00000684061.1
ENST00000684179.1
CDS TCA 72 bp TTCTCAGCACTATGGGACATTTCTCTCATTCCTTCCTaGGCTTTCAAGTATGCATTTTCAAAAGCTGTTTGC +
Preference number: 6 (lower is better)
Translates to: FSALWDISLIPS*AFKYAFSKAVC
Trigger: GCAAACAGCTTTTGAAAATGCATACTTGAAAGCTCAGGAAGGAATGAGAGAAATGTCCCATAGTGCTGAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000278616.9
ENST00000452508.6
ENST00000527805.6
ENST00000675595.1
ENST00000675843.1
ENST00000683174.1
CDS TCA 72 bp CACTACAATACAGCGTTGTTTGTAGCAGCAAAAGACTaGAAACAACACAAATGCCCATCGATAAGGACTTGT +
Preference number: 6 (lower is better)
Translates to: HYNTALFVAAKD*KQHKCPSIRTC
Trigger: ACAAGTCCTTATCGATGGGCATTTGTGTTGTTTTCAGTCTTTTGCTGCTACAAACAACGCTGTATTGTAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525056.2
CDS TCA 72 bp TGGTTCACAATTTCAGAACACACATCACTGTCTCTATaGGTCCCTTTAAGGACCCATATACATGCTTACAGT +
Preference number: 6 (lower is better)
Translates to: WFTISEHTSLSL*VPLRTHIHAYS
Trigger: ACTGTAAGCATGTATATGGGTCCTTAAAGGGACTCATAGAGACAGTGATGTGTGTTCTGAAATTGTGAACCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682430.1
CDS TCA 72 bp ACTACCTTTCGTTCTGTAGCTCTATCATGTTCTAGTTaGCGGCAGCAGATAAGCAGATCATTAAGTACTAGA +
Preference number: 6 (lower is better)
Translates to: TTFRSVALSCSS*RQQISRSLSTR
Trigger: TCTAGTACTTAATGATCTGCTTATCTGCTGCCGTCAACTAGAACATGATAGAGCTACAGAACGAAAGGTAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683488.1
CDS GCA 72 bp TTCTTGGTACAGTTGCTCAAGCAACGTGTACATAGCTaGATCATATTTCTCAAGGAACCAATTCTGAATTCC +
Preference number: 6 (lower is better)
Translates to: FLVQLLKQRVHS*IIFLKEPILNS
Trigger: GGAATTCAGAATTGGTTCCTTGAGAAATATGATGCAGCTATGTACACGTTGCTTGAGCAACTGTACCAAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000278616.9
ENST00000452508.6
ENST00000527805.6
ENST00000675595.1
ENST00000675843.1
ENST00000682516.1
ENST00000683174.1
ENST00000683605.1
ENST00000684037.1
CDS GCA 72 bp AATTACAGAACTTTACTGTTAAGAATTCCCAGGGACTaGGAACAATGTCATCTTTGTTCCCTGCGTAACTTC +
Preference number: 6 (lower is better)
Translates to: NYRTLLLRIPRD*EQCHLCSLRNF
Trigger: GAAGTTACGCAGGGAACAAAGATGACATTGTTCGCAGTCCCTGGGAATTCTTAACAGTAAAGTTCTGTAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533733.6
CDS GCA 72 bp AGATACTATGGTACTTTGGCTCTCTCCAGGTTCGTTTaGATCACTAACACTACTATCAGGGTAATCGTTAAA +
Preference number: 6 (lower is better)
Translates to: RYYGTLALSRFV*ITNTTIRVIVK
Trigger: TTTAACGATTACCCTGATAGTAGTGTTAGTGATGCAAACGAACCTGGAGAGAGCCAAAGTACCATAGTATCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000682516.1
ENST00000684037.1
CDS GCA 72 bp TTTACCTATGGTACTTTGGCTCTCTCCAGGTTCGTTTaGATCACTAACACTACTATCAGGGTAATCGTTAAA +
Preference number: 6 (lower is better)
Translates to: FTYGTLALSRFV*ITNTTIRVIVK
Trigger: TTTAACGATTACCCTGATAGTAGTGTTAGTGATGCAAACGAACCTGGAGAGAGCCAAAGTACCATAGGTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683605.1
CDS CAA 72 bp CCAGTTGTCTTCGAAGATCCTTTAGTCCTTCAAGTCTaGTCAATGGAAGTGCATCATAAACACTTACTGAGA +
Preference number: 6 (lower is better)
Translates to: PVVFEDPLVLQV*SMEVHHKHLLR
Trigger: TCTCAGTAAGTGTTTATGATGCACTTCCATTGACAAGACTTGAAGGACTAAAGGATCTTCGAAGACAACTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000278616.9
ENST00000452508.6
ENST00000524792.5
ENST00000531525.2
ENST00000675843.1
ENST00000683174.1
CDS CAA 90 bp TTTTCACCAGTGTGGTTTATTGCCATCTTGGATAACTGCAACAAATaGACAACTAGTTTCACCATAATCCCATCTTGCGGATTATCTCCA +
Preference number: 6 (lower is better)
Translates to: FSPVWFIAILDNCNK*TTSFTIIPSCGLSP
Trigger: TGGAGATAATCCGCAAGATGGGATTATGGTGAAACTAGTTGTCAATTTGTTGCAGTTATCCAAGATGGCAATAAACCACACTGGTGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675595.1
ENST00000683524.1
CDS TCA 72 bp TCTTTCTTTCGTTCTGTAGCTCTATCATGTTCTAGTTaGCGGCAGCAGATAAGCAGATCATTAAGTACTAGA +
Preference number: 6 (lower is better)
Translates to: SFFRSVALSCSS*RQQISRSLSTR
Trigger: TCTAGTACTTAATGATCTGCTTATCTGCTGCCGTCAACTAGAACATGATAGAGCTACAGAACGAAAGAAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 25 transcripts:
ENST00000278616.9
ENST00000452508.6
ENST00000526567.5
ENST00000527805.6
ENST00000530958.5
ENST00000532931.5
ENST00000601453.2
ENST00000638443.1
ENST00000639240.1
ENST00000639953.1
ENST00000640388.1
ENST00000675595.1
ENST00000675843.1
ENST00000682430.1
ENST00000682465.1
ENST00000682516.1
ENST00000682956.1
ENST00000683150.1
ENST00000683174.1
ENST00000683468.1
ENST00000683914.1
ENST00000684029.1
ENST00000684037.1
ENST00000684061.1
ENST00000684179.1
CDS TCA 72 bp ATATTAACTTCCGTTATGACTGTTTCGAAAGTCTCCTaGTATCTCTTCTTCCGCTCATACCTCAAAAACAGC +
Preference number: 6 (lower is better)
Translates to: ILTSVMTVSKVS*YLFFRSYLKNS
Trigger: GCTGTTTTTGAGGTATGAGCGGAAGAAGAGATATCAGGAGACTTTCGAAACAGTCATAACGGAAGTTAATAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000530958.5
ENST00000683468.1
ENST00000683488.1
CDS TCA 72 bp GTCCCTTTAAGGACCCATATACATGCTTACAGTGCCTaGAACACAGCAAATGTTAGCAATGATCATATTAAC +
Preference number: 6 (lower is better)
Translates to: VPLRTHIHAYSA*NTANVSNDHIN
Trigger: GTTAATATGATCATTGCTAACATTTGCTGTGTTTCAGGCACTGTAAGCATGTATATGGGTCCTTAAAGGGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000530958.5
ENST00000683468.1
ENST00000683488.1
CDS TCA 72 bp AACTTCTTTCGTTCTGTAGCTCTATCATGTTCTAGTTaGCGGCAGCAGATAAGCAGATCATTAAGTACTAGA +
Preference number: 6 (lower is better)
Translates to: NFFRSVALSCSS*RQQISRSLSTR
Trigger: TCTAGTACTTAATGATCTGCTTATCTGCTGCCGTCAACTAGAACATGATAGAGCTACAGAACGAAAGAAGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682147.1
CDS GCA 72 bp TTGAGAGTAATTTGGCAATATGTACCAGATTACAGATaGATGTATCCTCTAACCCAGCAATCCAACTTTTGG +
Preference number: 6 (lower is better)
Translates to: LRVIWQYVPDYR*MYPLTQQSNFW
Trigger: CCAAAAGTTGGATTGCTGGGTTAGAGGATACATGCATCTGTAATCTGGTACATATTGCCAAATTACTCTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525056.2
CDS CCA 72 bp TCCCAAGTAGTAAATATGTATTTACCTATGGTACTTTaGCTCTCTCCAGGTTCGTTTGCATCACTAACACTA +
Preference number: 6 (lower is better)
Translates to: SQVVNMYLPMVL*LSPGSFASLTL
Trigger: TAGTGTTAGTGATGCAAACGAACCTGGAGAGAGCCAAAGTACCATAGGTAAATACATATTTACTACTTGGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683605.1
CDS CAA 72 bp CTAGGTGCTCTTCTGTTTGCACATTTGATGAAGTATTaGACCAAACTACTGATTTCCTGCATCTTTTTCTGC +
Preference number: 6 (lower is better)
Translates to: LGALLFAHLMKY*TKLLISCIFFC
Trigger: GCAGAAAAAGATGCAGGAAATCAGTAGTTTGGTCAAATACTTCATCAAATGTGCAAACAGAAGAGCACCTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000278616.9
ENST00000452508.6
ENST00000527805.6
ENST00000530958.5
ENST00000601453.2
ENST00000675843.1
ENST00000682147.1
ENST00000682430.1
ENST00000682516.1
ENST00000682956.1
ENST00000683174.1
ENST00000684029.1
ENST00000684037.1
ENST00000684061.1
CDS CAA 72 bp ATTTCATCTCCTAATTCACACACTCGAATTCGAAAGTaGACAGCCAAAGTCTTGAGGAAGATAGTAAGAGCT +
Preference number: 6 (lower is better)
Translates to: ISSPNSHTRIRK*TAKVLRKIVRA
Trigger: AGCTCTTACTATCTTCCTCAAGACTTTGGCTGTCAACTTTCGAATTCGAGTGTGTGAATTAGGAGATGAAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000278616.9
ENST00000452508.6
ENST00000527805.6
ENST00000675595.1
ENST00000675843.1
ENST00000682430.1
ENST00000682516.1
ENST00000682956.1
ENST00000683100.1
ENST00000683174.1
ENST00000683605.1
ENST00000684037.1
ENST00000684061.1
ENST00000684179.1
CDS CAA 72 bp CCTTTTGCAAGGGACACTGTAATCACTAGATTCTCTTaGTGTAGTAGTGTAAGATTGAGAAATCTCCAAGGA +
Preference number: 6 (lower is better)
Translates to: PFARDTVITRFS*CSSVRLRNLQG
Trigger: TCCTTGGAGATTTCTCAATCTTACACTACTACACAAAGAGAATCTAGTGATTACAGTGTCCCTTGCAAAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000278616.9
ENST00000452508.6
ENST00000527805.6
ENST00000675595.1
ENST00000675843.1
ENST00000682516.1
ENST00000682956.1
ENST00000683174.1
ENST00000683605.1
ENST00000684037.1
ENST00000684061.1
ENST00000684179.1
CDS CAA 72 bp AAGATAAGGATTTCCTACTTCCTACGAGCCTCTGAATaGACGAATTCAGTGTTCCTTTTTAGATCTCAACCA +
Preference number: 6 (lower is better)
Translates to: KIRISYFLRASE*TNSVFLFRSQP
Trigger: TGGTTGAGATCTAAAAAGGAACACTGAATTCGTCAATTCAGAGGCTCGTAGGAAGTAGGAAATCCTTATCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000530958.5
ENST00000683468.1
ENST00000683488.1
CDS CAA 72 bp AATACTGTGGAGAAACTGAGCTTGATTACATGTAGCTaGTCCGTTAAGTTCAAGGTTTCCTATGTGACTTCA +
Preference number: 6 (lower is better)
Translates to: NTVEKLSLITCS*SVKFKVSYVTS
Trigger: TGAAGTCACATAGGAAACCTTGAACTTAACGGACAAGCTACATGTAATCAAGCTCAGTTTCTCCACAGTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682569.1
CDS CAA 72 bp CCTCAAAACCCAAGGTTTGGTGCTGCGTTTGGAATCTaGAGATATATATTAGGTGTAGAATTAGGATACCAA +
Preference number: 6 (lower is better)
Translates to: PQNPRFGAAFGI*RYILGVELGYQ
Trigger: TTGGTATCCTAATTCTACACCTAATATATATCTCAAGATTCCAAACGCAGCACCAAACCTTGGGTTTTGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682569.1
CDS CAA 72 bp ATCCCAAGTAGTAAATATGTATTTACCTATGGTACTTaGGCTCTCTCCAGGTTCGTTTGCATCACTAACACT +
Preference number: 6 (lower is better)
Translates to: IPSSKYVFTYGT*ALSRFVCITNT
Trigger: AGTGTTAGTGATGCAAACGAACCTGGAGAGAGCCAAAGTACCATAGGTAAATACATATTTACTACTTGGGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683605.1
CDS CAA 90 bp AGGGACACTGTAATCACTAGATTCTCTTTGTGTAGTAGTGTAAGATaGAGAAATCTCCAAGGATCTGGTATCTTCATTAAAAACCTGGTG +
Preference number: 6 (lower is better)
Translates to: RDTVITRFSLCSSVR*RNLQGSGIFIKNLV
Trigger: CACCAGGTTTTTAATGAAGATACCAGATCCTTGGAGATTTCTCAATCTTACACTACTACACAAAGAGAATCTAGTGATTACAGTGTCCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000278616.9
ENST00000452508.6
ENST00000527805.6
ENST00000675595.1
ENST00000675843.1
ENST00000682516.1
ENST00000682956.1
ENST00000683174.1
ENST00000683605.1
ENST00000684061.1
ENST00000684179.1
CDS CAA 90 bp TATGTAGTTCCAGTTGTCTTCGAAGATCCTTTAGTCCTTCAAGTCTaGTCAATGGAAGTGCATCATAAACACTTACTGAGAGAAAATGGT +
Preference number: 6 (lower is better)
Translates to: YVVPVVFEDPLVLQV*SMEVHHKHLLRENG
Trigger: ACCATTTTCTCTCAGTAAGTGTTTATGATGCACTTCCATTGACAAGACTTGAAGGACTAAAGGATCTTCGAAGACAACTGGAACTACATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000278616.9
ENST00000452508.6
ENST00000524792.5
ENST00000531525.2
ENST00000675843.1
ENST00000683174.1
CDS CAA 90 bp TTTTCACCAGTGTGGTTTATTGCCATCTTGGATAACTGCAACAAATaGACAACTAGTTTCACCATAATCCCATCTTGCGGATTATCTGTT +
Preference number: 6 (lower is better)
Translates to: FSPVWFIAILDNCNK*TTSFTIIPSCGLSV
Trigger: AACAGATAATCCGCAAGATGGGATTATGGTGAAACTAGTTGTCAATTTGTTGCAGTTATCCAAGATGGCAATAAACCACACTGGTGAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527805.6
CDS CAA 90 bp TTTTCACCAGTGTGGTTTATTGCCATCTTGGATAACTGCAACAAATaGACAACTAGTTTCACCATAATCCCATCTTGCGGATTATCTAGA +
Preference number: 6 (lower is better)
Translates to: FSPVWFIAILDNCNK*TTSFTIIPSCGLSR
Trigger: TCTAGATAATCCGCAAGATGGGATTATGGTGAAACTAGTTGTCAATTTGTTGCAGTTATCCAAGATGGCAATAAACCACACTGGTGAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533690.5
ENST00000684152.1
CDS CAA 90 bp TTTTCACCAGTGTGGTTTATTGCCATCTTGGATAACTGCAACAAATaGACAACTAGTTTCACCATAATCCCATCTTGCGGATTATCTGTA +
Preference number: 6 (lower is better)
Translates to: FSPVWFIAILDNCNK*TTSFTIIPSCGLSV
Trigger: TACAGATAATCCGCAAGATGGGATTATGGTGAAACTAGTTGTCAATTTGTTGCAGTTATCCAAGATGGCAATAAACCACACTGGTGAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683174.1
CDS TCA 72 bp CGCGAGGCTGAAGTTGAAATATCAATAAATGCTCGCTaGCTAAAAGTACTAAATACGAGAGAGAGATCAAAA +
Preference number: 6 (lower is better)
Translates to: REAEVEISINAR*LKVLNTRERSK
Trigger: TTTTGATCTCTCTCTCGTATTTAGTACTTTTAGTCAGCGAGCATTTATTGATATTTCAACTTCAGCCTCGCG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278616.9
ENST00000530958.5
ENST00000683468.1
ENST00000683488.1
CDS TCA 72 bp CTGAAGTACACAGAGAACAATTCTAACCACTGTTGCTaGGATATTTCACACCAGTATTTTCTCACAGAAAGA +
Preference number: 6 (lower is better)
Translates to: LKYTENNSNHCC*DISHQYFLTER
Trigger: TCTTTCTGTGAGAAAATACTGGTGTGAAATATCTCAGCAACAGTGGTTAGAATTGTTCTCTGTGTACTTCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000278616.9
ENST00000452508.6
ENST00000527805.6
ENST00000675843.1
ENST00000682430.1
ENST00000682516.1
ENST00000682956.1
ENST00000683174.1
ENST00000684037.1
ENST00000684061.1
CDS CAA 90 bp TCTTTTTCTGCCTGGAGGCTTGTGTTGAGGCTGATACATTTGGTTTaGCTATTCTCAGACATTCTGTTTCTTTCTGAATATATTTCTGTA +
Preference number: 6 (lower is better)
Translates to: SFSAWRLVLRLIHLV*LFSDILFLSEYISV
Trigger: TACAGAAATATATTCAGAAAGAAACAGAATGTCTGAGAATAGCAAAACCAAATGTATCAGCCTCAACACAAGCCTCCAGGCAGAAAAAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 27 transcripts:
ENST00000278616.9
ENST00000452508.6
ENST00000526567.5
ENST00000527805.6
ENST00000530958.5
ENST00000532931.5
ENST00000601453.2
ENST00000638443.1
ENST00000639240.1
ENST00000639953.1
ENST00000640388.1
ENST00000675595.1
ENST00000675843.1
ENST00000682147.1
ENST00000682430.1
ENST00000682465.1
ENST00000682516.1
ENST00000682956.1
ENST00000683150.1
ENST00000683174.1
ENST00000683468.1
ENST00000683488.1
ENST00000683914.1
ENST00000684029.1
ENST00000684037.1
ENST00000684061.1
ENST00000684179.1
CDS CAA 90 bp TATTTTCTTCCTTTTGCAAGGGACACTGTAATCACTAGATTCTCTTaGTGTAGTAGTGTAAGATTGAGAAATCTCCAAGGATCTGGTATC +
Preference number: 6 (lower is better)
Translates to: YFLPFARDTVITRFS*CSSVRLRNLQGSGI
Trigger: GATACCAGATCCTTGGAGATTTCTCAATCTTACACTACTACACAAAGAGAATCTAGTGATTACAGTGTCCCTTGCAAAAGGAAGAAAATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000278616.9
ENST00000452508.6
ENST00000527805.6
ENST00000675595.1
ENST00000675843.1
ENST00000682516.1
ENST00000682956.1
ENST00000683174.1
ENST00000683605.1
ENST00000684037.1
ENST00000684061.1
ENST00000684179.1
CDS CAA 90 bp TGGTACCCTCATAGGCAAAATAAGGAAGAATATTTACAAGAATCTTaGGAAAGCAGTCTGTTAGAAGACTTTTCCAGTCCTCTTGAATCT +
Preference number: 6 (lower is better)
Translates to: WYPHRQNKEEYLQES*ESSLLEDFSSPLES
Trigger: AGATTCAAGAGGACTGGAAAAGTCTTCTAACAGACTGCTTTCCAAAGATTCTTGTAAATATTCTTCCTTATTTTGCCTATGAGGGTACCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000278616.9
ENST00000452508.6
ENST00000527805.6
ENST00000675595.1
ENST00000675843.1
ENST00000682289.1
ENST00000683174.1
CDS CAA 90 bp AGGGACACTGTAATCACTAGATTCTCTTTGTGTAGTAGTGTAAGATaGAGAAATCTCCAAGGATCTGGTATCTTCATTAAAAACTTACTG +
Preference number: 6 (lower is better)
Translates to: RDTVITRFSLCSSVR*RNLQGSGIFIKNLL
Trigger: CAGTAAGTTTTTAATGAAGATACCAGATCCTTGGAGATTTCTCAATCTTACACTACTACACAAAGAGAATCTAGTGATTACAGTGTCCCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000684037.1
CDS TCA 72 bp ACAATGGTTAAAAAGTCCATCTTGTCAAAAGTTGTCTaGAGAAATAGTTCTTCTACTTCATTCTGGCACGCT +
Preference number: 6 (lower is better)
Translates to: TMVKKSILSKVV*RNSSSTSFWHA
Trigger: AGCGTGCCAGAATGAAGTAGAAGAACTATTTCTTCAGACAACTTTTGACAAGATGGACTTTTTAACCATTGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533526.1
CDS CCA 72 bp TACTTCATTTACATAGGGTGTATACCAAGTAACCAATaGAAAACCTCTGAAGGGTATTTAAACCCCAGAAAA +
Preference number: 6 (lower is better)
Translates to: YFIYIGCIPSNQ*KTSEGYLNPRK
Trigger: TTTTCTGGGGTTTAAATACCCTTCAGAGGTTTTCCATTGGTTACTTGGTATACACCCTATGTAAATGAAGTA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533733.6
CDS CCA 72 bp GCTATCTGTATACAGTTTCTCAGTAAATCTGCAGGTTaGGACTATAAAATGCCTTTAGCAGATTTAGTTTCA +
Preference number: 6 (lower is better)
Translates to: AICIQFLSKSAG*DYKMPLADLVS
Trigger: TGAAACTAAATCTGCTAAAGGCATTTTATAGTCCCAACCTGCAGATTTACTGAGAAACTGTATACAGATAGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682569.1
CDS CAA 72 bp TTTAAAAGCATTAGATACATATGCAGGTGGAGGGATTaGGTAGGTTCTAGCGTGCTAGAATCAATTAACATT +
Preference number: 6 (lower is better)
Translates to: FKSIRYICRWRD*VGSSVLESINI
Trigger: AATGTTAATTGATTCTAGCACGCTAGAACCTACCAAATCCCTCCACCTGCATATGTATCTAATGCTTTTAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000278616.9
ENST00000452508.6
ENST00000527805.6
ENST00000675595.1
ENST00000675843.1
ENST00000683174.1
CDS CAA 72 bp CATCACTTACTTCTGTTTGCACATTTGATGAAGTATTaGACCAAACTACTGATTTCCTGCATCTTTTTCTGC +
Preference number: 6 (lower is better)
Translates to: HHLLLFAHLMKY*TKLLISCIFFC
Trigger: GCAGAAAAAGATGCAGGAAATCAGTAGTTTGGTCAAATACTTCATCAAATGTGCAAACAGAAGTAAGTGATG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000526567.5
ENST00000638443.1
ENST00000639240.1
ENST00000639953.1
ENST00000640388.1
ENST00000682465.1
ENST00000683150.1
ENST00000683468.1
ENST00000683488.1
ENST00000683914.1
CDS CAA 72 bp TACTTCAAAACCAAGGGCTTGTGTCAGGAATCATACTaGCAAATATTAGAATTAAGGAGGAACTGGAATAAG +
Preference number: 6 (lower is better)
Translates to: YFKTKGLCQESY*QILELRRNWNK
Trigger: CTTATTCCAGTTCCTCCTTAATTCTAATATTTGCAAGTATGATTCCTGACACAAGCCCTTGGTTTTGAAGTA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682569.1
CDS TCA 72 bp CGAAATCCTGAAGAATACTTTCCTCTACTTCCTATATaGCTTATCTCATTCACTAGCAGATCATATAAGTTG +
Preference number: 6 (lower is better)
Translates to: RNPEEYFPLLPI*LISFTSRSYKL
Trigger: CAACTTATATGATCTGCTAGTGAATGAGATAAGTCATATAGGAAGTAGAGGAAAGTATTCTTCAGGATTTCG
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000278616.9
ENST00000452508.6
ENST00000527805.6
ENST00000675595.1
ENST00000675843.1
ENST00000682516.1
ENST00000682956.1
ENST00000683100.1
ENST00000683174.1
ENST00000683605.1
ENST00000684037.1
ENST00000684061.1
ENST00000684179.1
CDS TCA 72 bp TTGGAAATCCATGCTACAAATTTGCCTGCGCATGTATaGAATTTGTATGTTCAAGGTTATTCACTACAATAC +
Preference number: 6 (lower is better)
Translates to: LEIHATNLPAHV*NLYVQGYSLQY
Trigger: GTATTGTAGTGAATAACCTTGAACATACAAATTTCATACATGCGCAGGCAAATTTGTAGCATGGATTTCCAA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525056.2
CDS GCA 72 bp AATCCAACTTTTGGAAATCCATGCTACAAATTTGCCTaGGCATGTATGAAATTTGTATGTTCAAGGTTATTC +
Preference number: 6 (lower is better)
Translates to: NPTFGNPCYKFA*ACMKFVCSRLF
Trigger: GAATAACCTTGAACATACAAATTTCATACATGCGCAGGCAAATTTGTAGCATGGATTTCCAAAAGTTGGATT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525056.2
CDS GCA 72 bp GTGCTTTGGTATAATGATTTCTCTAATAACAGAAGATaGTATACAATGAGTGCCCAACATCAAAAAGTACAG +
Preference number: 6 (lower is better)
Translates to: VLWYNDFSNNRR*YTMSAQHQKVQ
Trigger: CTGTACTTTTTGATGTTGGGCACTCATTGTATAGCATCTTCTGTTATTAGAGAAATCATTATACCAAAGCAC
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000684447.1