RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ATG7 (Homo sapiens)

Ensembl gene IDs: ENSG00000197548

Ensembl transcript IDs: ENST00000354449.7, ENST00000354956.9, ENST00000414717.5, ENST00000418682.5, ENST00000419112.5, ENST00000423116.1, ENST00000424071.5, ENST00000427759.5, ENST00000434066.6, ENST00000435760.5, ENST00000444619.5, ENST00000446110.1, ENST00000446450.6, ENST00000451513.5, ENST00000451830.5, ENST00000460291.1, ENST00000460444.5, ENST00000461278.1, ENST00000464282.1, ENST00000467121.1, ENST00000469654.2, ENST00000470474.1, ENST00000478638.5, ENST00000488924.5

Found 769 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCCACAGGAGGAGCCTGCGGTGCGGTGGGCAGCACATTCCGGGGATaGGGGTGCCACCTCCCGCAGTGGCTCTGGGCAGGAGCTGGTTGC +
Preference number: 1 (lower is better)
Translates to: PTGGACGAVGSTFRG*GCHLPQWLWAGAGC
Trigger: GCAACCAGCTCCTGCCCAGAGCCACTGCGGGAGGTGGCACCCTCATCCCCGGAATGTGCTGCCCACCGCACCGCAGGCTCCTCCTGTGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354449.7
3UTR TCA 90 bp GACCGGCTCGGTGGAGGACACTCCTGGGACAGGTCTCTTTGTCAGTaGACAAGGGCGTCACTCTGGGAGGGGTCGGCGGTGCTGGCGGCC +
Preference number: 1 (lower is better)
Translates to: DRLGGGHSWDRSLCQ*TRASLWEGSAVLAA
Trigger: GGCCGCCAGCACCGCCGACCCCTCCCAGAGTGACGCCCTTGTTCACTGACAAAGAGACCTGTCCCAGGAGTGTCCTCCACCGAGCCGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354449.7
3UTR CCA 90 bp TCCCAGACCTCGGGGTATGGAGGAGGGGCCCAGAATCACCAGGCCTaGGGTCAGCAGTCCTGCTCTGGCGATGGAGAGCTCCTCAGCAGG +
Preference number: 1 (lower is better)
Translates to: SQTSGYGGGAQNHQA*GQQSCSGDGELLSR
Trigger: CCTGCTGAGGAGCTCTCCATCGCCAGAGCAGGACTGCTGACCCCAGGCCTGGTGATTCTGGGCCCCTCCTCCATACCCCGAGGTCTGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
3UTR TCA 90 bp CCCACCTGGCCCACCAGAGGCTCACGACGATGGCACCTGACCAGGTaGCGTGGGCGTGGTCACCTCACCTGCAAGGCTTTGTGGACTCTG +
Preference number: 1 (lower is better)
Translates to: PTWPTRGSRRWHLTR*RGRGHLTCKALWTL
Trigger: CAGAGTCCACAAAGCCTTGCAGGTGAGGTGACCACGCCCACGTCACCTGGTCAGGTGCCATCGTCGTGAGCCTCTGGTGGGCCAGGTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354449.7
3UTR GCA 90 bp CTCTTTGTCAGTGAACAAGGGCGTCACTCTGGGAGGGGTCGGCGGTaGTGGCGGCCGGGTCCCTGGTGCACTGACCTATCTGGGATAGGC +
Preference number: 1 (lower is better)
Translates to: LFVSEQGRHSGRGRR*WRPGPWCTDLSGIG
Trigger: GCCTATCCCAGATAGGTCAGTGCACCAGGGACCCGGCCGCCAGCACCGCCGACCCCTCCCAGAGTGACGCCCTTGTTCACTGACAAAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354449.7
3UTR TCA 90 bp TGCTGTGTCCCACCTGGCCCACCAGAGGCTCACGACGATGGCACCTaGCCAGGTGACGTGGGCGTGGTCACCTCACCTGCAAGGCTTTGT +
Preference number: 1 (lower is better)
Translates to: CCVPPGPPEAHDDGT*PGDVGVVTSPARLC
Trigger: ACAAAGCCTTGCAGGTGAGGTGACCACGCCCACGTCACCTGGTCAGGTGCCATCGTCGTGAGCCTCTGGTGGGCCAGGTGGGACACAGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354449.7
3UTR CCA 90 bp GATGCCCTCTACACGGGGGCAGGGTGGTCACAGGTACCTAGGCCATaGCCTCTCCTGGGTTGGGGCCTCACAGCTGCACACACCCAGAAT +
Preference number: 1 (lower is better)
Translates to: DALYTGAGWSQVPRP*PLLGWGLTAAHTQN
Trigger: ATTCTGGGTGTGTGCAGCTGTGAGGCCCCAACCCAGGAGAGGCCATGGCCTAGGTACCTGTGACCACCCTGCCCCCGTGTAGAGGGCATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000354449.7
3UTR CCA 90 bp CTGGCCCACCAGAGGCTCACGACGATGGCACCTGACCAGGTGACGTaGGCGTGGTCACCTCACCTGCAAGGCTTTGTGGACTCTGCACAC +
Preference number: 1 (lower is better)
Translates to: LAHQRLTTMAPDQVT*AWSPHLQGFVDSAH
Trigger: GTGTGCAGAGTCCACAAAGCCTTGCAGGTGAGGTGACCACGCCCACGTCACCTGGTCAGGTGCCATCGTCGTGAGCCTCTGGTGGGCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354449.7
3UTR CCA 90 bp CACCAGAGGCTCACGACGATGGCACCTGACCAGGTGACGTGGGCGTaGTCACCTCACCTGCAAGGCTTTGTGGACTCTGCACACCGTATG +
Preference number: 1 (lower is better)
Translates to: HQRLTTMAPDQVTWA*SPHLQGFVDSAHRM
Trigger: CATACGGTGTGCAGAGTCCACAAAGCCTTGCAGGTGAGGTGACCACGCCCACGTCACCTGGTCAGGTGCCATCGTCGTGAGCCTCTGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354449.7
3UTR CCA 90 bp GGGGCAGGGTGGTCACAGGTACCTAGGCCATGGCCTCTCCTGGGTTaGGGCCTCACAGCTGCACACACCCAGAATAAAGAGGAAAACCAG +
Preference number: 1 (lower is better)
Translates to: GAGWSQVPRPWPLLG*GLTAAHTQNKEENQ
Trigger: CTGGTTTTCCTCTTTATTCTGGGTGTGTGCAGCTGTGAGGCCCCAACCCAGGAGAGGCCATGGCCTAGGTACCTGTGACCACCCTGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354449.7
3UTR CCA 90 bp ACACGGGGGCAGGGTGGTCACAGGTACCTAGGCCATGGCCTCTCCTaGGTTGGGGCCTCACAGCTGCACACACCCAGAATAAAGAGGAAA +
Preference number: 1 (lower is better)
Translates to: TRGQGGHRYLGHGLS*VGASQLHTPRIKRK
Trigger: TTTCCTCTTTATTCTGGGTGTGTGCAGCTGTGAGGCCCCAACCCAGGAGAGGCCATGGCCTAGGTACCTGTGACCACCCTGCCCCCGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000354449.7
3UTR TCA 90 bp CTATGCCCACAGTGGAGGACAGGCTGGGAGGCAGAAAGCCATGTCTaGGCAGCTCACTCAGTCCTTGGTGGAAATCTGGCGTCACTGGGT +
Preference number: 1 (lower is better)
Translates to: LCPQWRTGWEAESHV*AAHSVLGGNLASLG
Trigger: ACCCAGTGACGCCAGATTTCCACCAAGGACTGAGTGAGCTGCTCAGACATGGCTTTCTGCCTCCCAGCCTGTCCTCCACTGTGGGCATAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354449.7
3UTR CCA 90 bp AGCTCCTGGCAGGCCCTCGCGATGAGCAGTGGGTCAGCTGCGGTGTaGGATGCTGGAGTTTGGCTGCAGGCTGACATCATTTATTTTTGC +
Preference number: 1 (lower is better)
Translates to: SSWQALAMSSGSAAV*DAGVWLQADIIYFC
Trigger: GCAAAAATAAATGATGTCAGCCTGCAGCCAAACTCCAGCATCCCACACCGCAGCTGACCCACTGCTCATCGCGAGGGCCTGCCAGGAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000354449.7
3UTR CCA 90 bp GTCCAGGAGACCAGTGATTTCAACCACCTCCCCCTGGAGCATAGCTaGTTCACCTTGACTGTGCCTTGGTTCCAGGCCCAAGTAGCCCCT +
Preference number: 1 (lower is better)
Translates to: VQETSDFNHLPLEHS*FTLTVPWFQAQVAP
Trigger: AGGGGCTACTTGGGCCTGGAACCAAGGCACAGTCAAGGTGAACCAGCTATGCTCCAGGGGGAGGTGGTTGAAATCACTGGTCTCCTGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000414717.5
3UTR TCA 90 bp TTGCTACAGGCTACTGAGCGTCGTAACAGGAAAACCACCCACAGCTaGCCGGCTCGGTGGAGGACACTCCTGGGACAGGTCTCTTTGTCA +
Preference number: 1 (lower is better)
Translates to: LLQATERRNRKTTHS*PARWRTLLGQVSLS
Trigger: TGACAAAGAGACCTGTCCCAGGAGTGTCCTCCACCGAGCCGGTCAGCTGTGGGTGGTTTTCCTGTTACGACGCTCAGTAGCCTGTAGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354449.7
3UTR CCA 90 bp AGGCTGGGAGGCAGAAAGCCATGTCTGAGCAGCTCACTCAGTCCTTaGTGGAAATCTGGCGTCACTGGGTCATGTGGGCCCTTTAGTCTC +
Preference number: 1 (lower is better)
Translates to: RLGGRKPCLSSSLSP*WKSGVTGSCGPFSL
Trigger: GAGACTAAAGGGCCCACATGACCCAGTGACGCCAGATTTCCACCAAGGACTGAGTGAGCTGCTCAGACATGGCTTTCTGCCTCCCAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354449.7
3UTR CCA 90 bp AGCCACCGGCTCTCCCTGGTGTCCATCAATAGGAAGACGACATCATaGCTTTCGATGAGCTGCTCCAGTTGCTCCACATCTCTGCGGGCT +
Preference number: 1 (lower is better)
Translates to: SHRLSLVSINRKTTS*LSMSCSSCSTSLRA
Trigger: AGCCCGCAGAGATGTGGAGCAACTGGAGCAGCTCATCGAAAGCCATGATGTCGTCTTCCTATTGATGGACACCAGGGAGAGCCGGTGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424071.5
3UTR GCA 90 bp TGGCTTTCGATGAGCTGCTCCAGTTGCTCCACATCTCTGCGGGCTTaGTCCAGAGTGACACTGGAGAAGTTCACTGGATGCCCAGGCATA +
Preference number: 1 (lower is better)
Translates to: WLSMSCSSCSTSLRA*SRVTLEKFTGCPGI
Trigger: TATGCCTGGGCATCCAGTGAACTTCTCCAGTGTCACTCTGGAGCAAGCCCGCAGAGATGTGGAGCAACTGGAGCAGCTCATCGAAAGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424071.5
3UTR CCA 90 bp CTGGGAGGCAGAAAGCCATGTCTGAGCAGCTCACTCAGTCCTTGGTaGAAATCTGGCGTCACTGGGTCATGTGGGCCCTTTAGTCTCGTA +
Preference number: 1 (lower is better)
Translates to: LGGRKPCLSSSLSPW*KSGVTGSCGPFSLV
Trigger: TACGAGACTAAAGGGCCCACATGACCCAGTGACGCCAGATTTCCACCAAGGACTGAGTGAGCTGCTCAGACATGGCTTTCTGCCTCCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354449.7
3UTR TCA 90 bp TCTCCCTGGTGTCCATCAATAGGAAGACGACATCATGGCTTTCGATaGGCTGCTCCAGTTGCTCCACATCTCTGCGGGCTTGCTCCAGAG +
Preference number: 1 (lower is better)
Translates to: SPWCPSIGRRHHGFR*AAPVAPHLCGLAPE
Trigger: CTCTGGAGCAAGCCCGCAGAGATGTGGAGCAACTGGAGCAGCTCATCGAAAGCCATGATGTCGTCTTCCTATTGATGGACACCAGGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424071.5
3UTR TCA 90 bp AGGCCAAGGCCAAGGTTATTATTTAGCTCTGAACTGGTGGTATCTTaGATCCCGAGCAACGCCGAACACTGGCCACTCCTGGGCAGCAGA +
Preference number: 1 (lower is better)
Translates to: RPRPRLLFSSELVVS*IPSNAEHWPLLGSR
Trigger: TCTGCTGCCCAGGAGTGGCCAGTGTTCGGCGTTGCTCGGGATTCAAGATACCACCAGTTCAGAGCTAAATAATAACCTTGGCCTTGGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354449.7
ENST00000354956.9
3UTR TCA 90 bp GCCTTGGTTCCAGGCCCAAGTAGCCCCTTGACTGGATTTAGAGGTTaGGTCCCTGGCAGTGGGGTAGCATCTTACAGGAAGAAGTCAAAA +
Preference number: 1 (lower is better)
Translates to: ALVPGPSSPLTGFRG*VPGSGVASYRKKSK
Trigger: TTTTGACTTCTTCCTGTAAGATGCTACCCCACTGCCAGGGACTCAACCTCTAAATCCAGTCAAGGGGCTACTTGGGCCTGGAACCAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414717.5
3UTR GCA 90 bp CTTAAGAACAATAATAAAGTGCTCTTAAACCACATAGTGTACGTGTaGAGTTTCAGCGCCAGGCTGGGTGGGCGGACTCGGGCCCTGCAC +
Preference number: 1 (lower is better)
Translates to: LKNNNKVLLNHIVYV*SFSARLGGRTRALH
Trigger: GTGCAGGGCCCGAGTCCGCCCACCCAGCCTGGCGCTGAAACTGCACACGTACACTATGTGGTTTAAGAGCACTTTATTATTGTTCTTAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354449.7
3UTR GCA 90 bp TCTCTGCGGGCTTGCTCCAGAGTGACACTGGAGAAGTTCACTGGATaGCCAGGCATAGGTATGCTCATGTTGAATCCTCTGGCATTCACA +
Preference number: 1 (lower is better)
Translates to: SLRACSRVTLEKFTG*PGIGMLMLNPLAFT
Trigger: TGTGAATGCCAGAGGATTCAACATGAGCATACCTATGCCTGGGCATCCAGTGAACTTCTCCAGTGTCACTCTGGAGCAAGCCCGCAGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424071.5
3UTR GCA 90 bp ATCAATAGGAAGACGACATCATGGCTTTCGATGAGCTGCTCCAGTTaGTCCACATCTCTGCGGGCTTGCTCCAGAGTGACACTGGAGAAG +
Preference number: 1 (lower is better)
Translates to: INRKTTSWLSMSCSS*STSLRACSRVTLEK
Trigger: CTTCTCCAGTGTCACTCTGGAGCAAGCCCGCAGAGATGTGGAGCAACTGGAGCAGCTCATCGAAAGCCATGATGTCGTCTTCCTATTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424071.5
3UTR CCA 90 bp CACATCTCTGCGGGCTTGCTCCAGAGTGACACTGGAGAAGTTCACTaGATGCCCAGGCATAGGTATGCTCATGTTGAATCCTCTGGCATT +
Preference number: 1 (lower is better)
Translates to: HISAGLLQSDTGEVH*MPRHRYAHVESSGI
Trigger: AATGCCAGAGGATTCAACATGAGCATACCTATGCCTGGGCATCCAGTGAACTTCTCCAGTGTCACTCTGGAGCAAGCCCGCAGAGATGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424071.5
3UTR TCA 90 bp GGGTTTGTGTCTTCCAACTTCCCTACATGCAGAAACTGCTCCCTTTaGACTCTCTTGGCTGAACAGCAGATTACTGACAGACAATCTGTG +
Preference number: 1 (lower is better)
Translates to: GFVSSNFPTCRNCSL*TLLAEQQITDRQSV
Trigger: CACAGATTGTCTGTCAGTAATCTGCTGTTCAGCCAAGAGAGTTCAAAGGGAGCAGTTTCTGCATGTAGGGAAGTTGGAAGACACAAACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354449.7
3UTR CCA 90 bp ACTCTCTTGGCTGAACAGCAGATTACTGACAGACAATCTGTGATATaGTGTTTTATACGCTTCCTCGTACGCTGGGGCCAAGGCAGTATA +
Preference number: 1 (lower is better)
Translates to: TLLAEQQITDRQSVI*CFIRFLVRWGQGSI
Trigger: TATACTGCCTTGGCCCCAGCGTACGAGGAAGCGTATAAAACACCATATCACAGATTGTCTGTCAGTAATCTGCTGTTCAGCCAAGAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354449.7
3UTR GCA 90 bp CCAAGAATCAGATGGGCGAGGAATAAAAGATTCCATTCACAGAAGTaGTTGATTCTTCCGTCCATTTGTTTATGTTCTGCCTCTCCTGCT +
Preference number: 1 (lower is better)
Translates to: PRIRWARNKRFHSQK*LILPSICLCSASPA
Trigger: AGCAGGAGAGGCAGAACATAAACAAATGGACGGAAGAATCAAGCACTTCTGTGAATGGAATCTTTTATTCCTCGCCCATCTGATTCTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427759.5
3UTR GCA 90 bp CAAAAGTCAGGAATTCATGAATTCAGTCTGGTCAGGCTTGCAGTCTaGTCAAGTACCATGATGTATCATGTGCCTCATTCTTTTAAAGGC +
Preference number: 1 (lower is better)
Translates to: QKSGIHEFSLVRLAV*SSTMMYHVPHSFKG
Trigger: GCCTTTAAAAGAATGAGGCACATGATACATCATGGTACTTGAGCAGACTGCAAGCCTGACCAGACTGAATTCATGAATTCCTGACTTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414717.5
3UTR CCA 90 bp GACAGACAATCTGTGATATGGTGTTTTATACGCTTCCTCGTACGCTaGGGCCAAGGCAGTATACATTCCTCTGACTTTATACTGTTATTA +
Preference number: 1 (lower is better)
Translates to: DRQSVIWCFIRFLVR*GQGSIHSSDFILLL
Trigger: TAATAACAGTATAAAGTCAGAGGAATGTATACTGCCTTGGCCCCAGCGTACGAGGAAGCGTATAAAACACCATATCACAGATTGTCTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354449.7
3UTR CCA 90 bp ATCATTGTTCATCTACCTTATGGAACAAAGCAGCCAAGAATCAGATaGGCGAGGAATAAAAGATTCCATTCACAGAAGTGCTTGATTCTT +
Preference number: 1 (lower is better)
Translates to: IIVHLPYGTKQPRIR*ARNKRFHSQKCLIL
Trigger: AAGAATCAAGCACTTCTGTGAATGGAATCTTTTATTCCTCGCCCATCTGATTCTTGGCTGCTTTGTTCCATAAGGTAGATGAACAATGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427759.5
3UTR-3UTR TCA 90 bp GCAGGCCCTCGCGATGAGCAGTGGGTCAGCTGCGGTGTGGGATGCTGGAGTTTGTGGCACCTGACCAGGTaGCGTGGGCGTGGTCACCTC +
Preference number: 2 (lower is better)
Translates to: AGPRDEQWVSCGVGCWSLWHLTR*RGRGHL
Trigger: GAGGTGACCACGCCCACGTCACCTGGTCAGGTGCCA...CAAACTCCAGCATCCCACACCGCAGCTGACCCACTGCTCATCGCGAGGGCCTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354449.7
3UTR CAA 90 bp GGGATGAGGGTGCCACCTCCCGCAGTGGCTCTGGGCAGGAGCTGGTaGCTCATTTCCCCATTTGGTCTGTGTTGGGTCACCCCCTCAGGG +
Preference number: 2 (lower is better)
Translates to: GMRVPPPAVALGRSW*LISPFGLCWVTPSG
Trigger: CCCTGAGGGGGTGACCCAACACAGACCAAATGGGGAAATGAGCAACCAGCTCCTGCCCAGAGCCACTGCGGGAGGTGGCACCCTCATCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000354449.7
3UTR-3UTR GCA 90 bp CTTAAACCACATAGTGTACGTGTGCAGTTTCAGCGCCAGGCTGGGTGGGCGGACCCACCAGGGCCAGGGTaGAGTGCGCTCACGGGGTCC +
Preference number: 2 (lower is better)
Translates to: LKPHSVRVQFQRQAGWADPPGPG*SALTGS
Trigger: GGACCCCGTGAGCGCACTGCACCCTGGCCCTGGTGG...GTCCGCCCACCCAGCCTGGCGCTGAAACTGCACACGTACACTATGTGGTTTAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354449.7
3UTR-3UTR TCA 90 bp CTTAAACCACATAGTGTACGTGTGCAGTTTCAGCGCCAGGCTGGGTGGGCGGACCATGGTAGAGCCGTCTaGCCCCTCCCTCGGCTGGGG +
Preference number: 2 (lower is better)
Translates to: LKPHSVRVQFQRQAGWADHGRAV*PLPRLG
Trigger: CCCCAGCCGAGGGAGGGGTCAGACGGCTCTACCATG...GTCCGCCCACCCAGCCTGGCGCTGAAACTGCACACGTACACTATGTGGTTTAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354449.7
3UTR-3UTR GCA 90 bp GAATATTTTCTGGAGCCGGTCCGCTGCTGCCAGAGCCTTGGGCTTACCACCCCCCATTGCAACCCAAGGTaGCGGCTCCAAGCAGCAGAC +
Preference number: 2 (lower is better)
Translates to: EYFLEPVRCCQSLGLTTPHCNPR*RLQAAD
Trigger: GTCTGCTGCTTGGAGCCGGCACCTTGGGTTGCAATG...GGGGGTGGTAAGCCCAAGGCTCTGGCAGCAGCGGACCGGCTCCAGAAAATATTC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000424071.5
3UTR-3UTR TCA 90 bp GAAAAGGTCGGAGGACTGGCTCTTGTAGTCACAGAGTGGCTGCAGGCCTTTGAAAGCACATTCCGGGGATaGGGGTGCCACCTCCCGCAG +
Preference number: 2 (lower is better)
Translates to: EKVGGLALVVTEWLQAFESTFRG*GCHLPQ
Trigger: CTGCGGGAGGTGGCACCCTCATCCCCGGAATGTGCT...TTCAAAGGCCTGCAGCCACTCTGTGACTACAAGAGCCAGTCCTCCGACCTTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000354449.7
3UTR-3UTR GCA 90 bp GCTGCGGTGTGGGATGCTGGAGTTTGGCTGCAGGCTGACATCATTTATTTTTGCCCTCCCCCTGGGGTGTaGTGTGTCCCACCTGGCCCA +
Preference number: 2 (lower is better)
Translates to: AAVWDAGVWLQADIIYFCPPPGV*CVPPGP
Trigger: TGGGCCAGGTGGGACACAGCACACCCCAGGGGGAGG...GCAAAAATAAATGATGTCAGCCTGCAGCCAAACTCCAGCATCCCACACCGCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000354449.7
3UTR-3UTR CCA 90 bp GGCAGAAAGCCATGTCTGAGCAGCTCACTCAGTCCTTGGTGGAAATCTGGCGTCAGCAACGCCGAACACTaGCCACTCCTGGGCAGCAGA +
Preference number: 2 (lower is better)
Translates to: GRKPCLSSSLSPWWKSGVSNAEH*PLLGSR
Trigger: TCTGCTGCCCAGGAGTGGCCAGTGTTCGGCGTTGCT...GACGCCAGATTTCCACCAAGGACTGAGTGAGCTGCTCAGACATGGCTTTCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354449.7
3UTR-3UTR CCA 90 bp GCTGCGGTGTGGGATGCTGGAGTTTGGCTGCAGGCTGACATCATTTATTTTTGCGGCCATGGCCTCTCCTaGGTTGGGGCCTCACAGCTG +
Preference number: 2 (lower is better)
Translates to: AAVWDAGVWLQADIIYFCGHGLS*VGASQL
Trigger: CAGCTGTGAGGCCCCAACCCAGGAGAGGCCATGGCC...GCAAAAATAAATGATGTCAGCCTGCAGCCAAACTCCAGCATCCCACACCGCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000354449.7
3UTR CAA 90 bp ATGGCTTTCGATGAGCTGCTCCAGTTGCTCCACATCTCTGCGGGCTaGCTCCAGAGTGACACTGGAGAAGTTCACTGGATGCCCAGGCAT +
Preference number: 2 (lower is better)
Translates to: MAFDELLQLLHISAG*LQSDTGEVHWMPRH
Trigger: ATGCCTGGGCATCCAGTGAACTTCTCCAGTGTCACTCTGGAGCAAGCCCGCAGAGATGTGGAGCAACTGGAGCAGCTCATCGAAAGCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424071.5
3UTR-3UTR TCA 90 bp GGTCCGCTGCTGCCAGAGCCTTGGGCTTACCACCCCCTAGGCAATCTTCAAACTCATTGTCCACAAATGTaGTGTGTCTCACGCCCCAAC +
Preference number: 2 (lower is better)
Translates to: GPLLPEPWAYHPLGNLQTHCPQM*CVSRPN
Trigger: GTTGGGGCGTGAGACACATCACATTTGTGGACAATG...AGTTTGAAGATTGCCTAGGGGGTGGTAAGCCCAAGGCTCTGGCAGCAGCGGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424071.5
3UTR-3UTR TCA 90 bp GCTGCGGTGTGGGATGCTGGAGTTTGGCTGCAGGCTGACATCATTTATTTTTGCCCCATGAAGCTCCCATaGGCTGAACGACAGCCACTG +
Preference number: 2 (lower is better)
Translates to: AAVWDAGVWLQADIIYFCPMKLP*AERQPL
Trigger: CAGTGGCTGTCGTTCAGCTCATGGGAGCTTCATGGG...GCAAAAATAAATGATGTCAGCCTGCAGCCAAACTCCAGCATCCCACACCGCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000354449.7
3UTR-3UTR GCA 90 bp TATTTAGCTCTGAACTGGTGGTATCTTGAATCCCGAGCAACGCCGAACACTGGCTGGGGTCAGCAGTCCTaGTCTGGCGATGGAGAGCTC +
Preference number: 2 (lower is better)
Translates to: YLALNWWYLESRATPNTGWGQQS*SGDGEL
Trigger: GAGCTCTCCATCGCCAGAGCAGGACTGCTGACCCCA...GCCAGTGTTCGGCGTTGCTCGGGATTCAAGATACCACCAGTTCAGAGCTAAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354449.7
ENST00000354956.9
3UTR-3UTR GCA 90 bp TGCTGGCGGCCGGGTCCCTGGTGCACTGACCTATCTGGGATAGGCAGTACCCTGACAAGAAATAAAAACTaGATGGAGGACCAAGTCCCA +
Preference number: 2 (lower is better)
Translates to: CWRPGPWCTDLSGIGSTLTRNKN*MEDQVP
Trigger: TGGGACTTGGTCCTCCATGCAGTTTTTATTTCTTGT...CAGGGTACTGCCTATCCCAGATAGGTCAGTGCACCAGGGACCCGGCCGCCAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000354449.7
3UTR-3UTR CCA 90 bp GAAAAGGTCGGAGGACTGGCTCTTGTAGTCACAGAGTGGCTGCAGGCCTTTGAAGGTGGAGGACACTCCTaGGACAGGTCTCTTTGTCAG +
Preference number: 2 (lower is better)
Translates to: EKVGGLALVVTEWLQAFEGGGHS*DRSLCQ
Trigger: CTGACAAAGAGACCTGTCCCAGGAGTGTCCTCCACC...TTCAAAGGCCTGCAGCCACTCTGTGACTACAAGAGCCAGTCCTCCGACCTTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354449.7
3UTR-3UTR CCA 90 bp AACCACCTCCCCCTGGAGCATAGCTGGTTCACCTTGACTGTGCCTTGGTTCCAGTTGAGTCCCTGGCAGTaGGGTAGCATCTTACAGGAA +
Preference number: 2 (lower is better)
Translates to: NHLPLEHSWFTLTVPWFQLSPWQ*GSILQE
Trigger: TTCCTGTAAGATGCTACCCCACTGCCAGGGACTCAA...CTGGAACCAAGGCACAGTCAAGGTGAACCAGCTATGCTCCAGGGGGAGGTGGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000414717.5
3UTR-3UTR TCA 90 bp GGACAACACGATGTCTCTCATACCTCCCCAGCCCCAATAACCATCACTCATGGCGCCCAAGTAGCCCCTTaGCTGGATTTAGAGGTTGAG +
Preference number: 2 (lower is better)
Translates to: GQHDVSHTSPAPITITHGAQVAP*LDLEVE
Trigger: CTCAACCTCTAAATCCAGTCAAGGGGCTACTTGGGC...GCCATGAGTGATGGTTATTGGGGCTGGGGAGGTATGAGAGACATCGTGTTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000414717.5
3UTR-3UTR CCA 90 bp GGCCAAGGTTATTATTTAGCTCTGAACTGGTGGTATCTTGAATCCCGAGCAACGGTCCTGCTCTGGCGATaGAGAGCTCCTCAGCAGGCG +
Preference number: 2 (lower is better)
Translates to: GQGYYLALNWWYLESRATVLLWR*RAPQQA
Trigger: CGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAGGAC...CGTTGCTCGGGATTCAAGATACCACCAGTTCAGAGCTAAATAATAACCTTGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354449.7
ENST00000354956.9
3UTR-3UTR CCA 90 bp CTTGCCCCGCACACATTTCACTCCCACTGTACTGGGCTTCCAAGCTTTGGCATTTCCTTGGTGGAAATCTaGCGTCACTGGGTCATGTGG +
Preference number: 2 (lower is better)
Translates to: LAPHTFHSHCTGLPSFGISLVEI*RHWVMW
Trigger: CCACATGACCCAGTGACGCCAGATTTCCACCAAGGA...AATGCCAAAGCTTGGAAGCCCAGTACAGTGGGAGTGAAATGTGTGCGGGGCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354449.7
3UTR-3UTR CCA 90 bp CTGTACTGGGCTTCCAAGCTTTGGCATTCAGGCCCCTATATTTTCTGTAGGAAACGGCCTTTCTGGGCCTaGCCTGCTCATAAGGGCAGG +
Preference number: 2 (lower is better)
Translates to: LYWASKLWHSGPYIFCRKRPFWA*PAHKGR
Trigger: CCTGCCCTTATGAGCAGGCCAGGCCCAGAAAGGCCG...TTTCCTACAGAAAATATAGGGGCCTGAATGCCAAAGCTTGGAAGCCCAGTACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354449.7
3UTR-3UTR CCA 90 bp GCTGCGGTGTGGGATGCTGGAGTTTGGCTGCAGGCTGACATCATTTATTTTTGCTCACTCAGTCCTTGGTaGAAATCTGGCGTCACTGGG +
Preference number: 2 (lower is better)
Translates to: AAVWDAGVWLQADIIYFCSLSPW*KSGVTG
Trigger: CCCAGTGACGCCAGATTTCCACCAAGGACTGAGTGA...GCAAAAATAAATGATGTCAGCCTGCAGCCAAACTCCAGCATCCCACACCGCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000354449.7
3UTR-3UTR TCA 90 bp ATGGCCCAGTCCAGGAGACCAGTGATTTCAACCACCTCCCCCTGGAGCATAGCTTCTGCTCAAGTACCATaGTGTATCATGTGCCTCATT +
Preference number: 2 (lower is better)
Translates to: MAQSRRPVISTTSPWSIASAQVP*CIMCLI
Trigger: AATGAGGCACATGATACATCATGGTACTTGAGCAGA...AGCTATGCTCCAGGGGGAGGTGGTTGAAATCACTGGTCTCCTGGACTGGGCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000414717.5
3UTR-3UTR CCA 90 bp TCAATAGCAAGGCCAAGGCCAAGGTTATTATTTAGCTCTGAACTGGTGGTATCTGTCCTGCTCTGGCGATaGAGAGCTCCTCAGCAGGCG +
Preference number: 2 (lower is better)
Translates to: SIARPRPRLLFSSELVVSVLLWR*RAPQQA
Trigger: CGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAGGAC...AGATACCACCAGTTCAGAGCTAAATAATAACCTTGGCCTTGGCCTTGCTATTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354449.7
ENST00000354956.9
3UTR-3UTR CCA 90 bp AGCTACATTGCAACCCAAGGTGCCGGCTCCAAGCAGCAGACATTTGACAGACACCCCATGCCTCCTTTCTaGTTCTTTTCCCATCCAACT +
Preference number: 2 (lower is better)
Translates to: SYIATQGAGSKQQTFDRHPMPPF*FFSHPT
Trigger: AGTTGGATGGGAAAAGAACCAGAAAGGAGGCATGGG...GTGTCTGTCAAATGTCTGCTGCTTGGAGCCGGCACCTTGGGTTGCAATGTAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434066.6
3UTR-3UTR CCA 90 bp TCGTTGAGAACACTTTTCTATATGGGTGATTTTGAGACCATCGTTACGCTGTGCCAGGCTCGGCCTTTCTaGGCCTGGCCTGCTCATAAG +
Preference number: 2 (lower is better)
Translates to: SLRTLFYMGDFETIVTLCQARPF*AWPAHK
Trigger: CTTATGAGCAGGCCAGGCCCAGAAAGGCCGAGCCTG...GCACAGCGTAACGATGGTCTCAAAATCACCCATATAGAAAAGTGTTCTCAACGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354449.7
3UTR CAA 90 bp CCCAAGGTGCCGGCTCCAAGCAGCAGACATTTGACAGACACAACCTaGTCCAAGTCTAAAGTAGGAACCAATCTCCAACACATCAGTTTG +
Preference number: 2 (lower is better)
Translates to: PKVPAPSSRHLTDTT*SKSKVGTNLQHISL
Trigger: CAAACTGATGTGTTGGAGATTGGTTCCTACTTTAGACTTGGACAAGGTTGTGTCTGTCAAATGTCTGCTGCTTGGAGCCGGCACCTTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424071.5
ENST00000434066.6
3UTR CAA 90 bp CTAGCTACATTGCAACCCAAGGTGCCGGCTCCAAGCAGCAGACATTaGACAGACACAACCTTGTCCAAGTCTAAAGTAGGAACCAATCTC +
Preference number: 2 (lower is better)
Translates to: LATLQPKVPAPSSRH*TDTTLSKSKVGTNL
Trigger: GAGATTGGTTCCTACTTTAGACTTGGACAAGGTTGTGTCTGTCAAATGTCTGCTGCTTGGAGCCGGCACCTTGGGTTGCAATGTAGCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424071.5
ENST00000434066.6
3UTR-3UTR CCA 90 bp GTGATATGGTGTTTTATACGCTTCCTCGTACGCTGGGGCCAAGGCAGTATACATACAGCCACTGGAACTTaGACTGGCTACTTTGGGAGA +
Preference number: 2 (lower is better)
Translates to: VIWCFIRFLVRWGQGSIHTATGT*TGYFGR
Trigger: TCTCCCAAAGTAGCCAGTCCAAGTTCCAGTGGCTGT...ATGTATACTGCCTTGGCCCCAGCGTACGAGGAAGCGTATAAAACACCATATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354449.7
3UTR-3UTR CCA 90 bp CAGAGACCTTTGAAGATACACAGAGGTAGATGGACAACACGATGTCTCTCATACCCCCTGGAGCATAGCTaGTTCACCTTGACTGTGCCT +
Preference number: 2 (lower is better)
Translates to: QRPLKIHRGRWTTRCLSYPLEHS*FTLTVP
Trigger: AGGCACAGTCAAGGTGAACCAGCTATGCTCCAGGGG...GTATGAGAGACATCGTGTTGTCCATCTACCTCTGTGTATCTTCAAAGGTCTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000414717.5
3UTR CAA 90 bp CCACTGGAACTTGGACTGGCTACTTTGGGAGAAGCGAAGCCTCATTaGAAATCTACCCTACTAAATCCTACTGTTGTAAGGGTCAGCTCG +
Preference number: 2 (lower is better)
Translates to: PLELGLATLGEAKPH*KSTLLNPTVVRVSS
Trigger: CGAGCTGACCCTTACAACAGTAGGATTTAGTAGGGTAGATTTCAAATGAGGCTTCGCTTCTCCCAAAGTAGCCAGTCCAAGTTCCAGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354449.7
3UTR-3UTR TCA 90 bp CAGAGACCTTTGAAGATACACAGAGGTAGATGGACAACACGATGTCTCTCATACATAGCTGGTTCACCTTaGCTGTGCCTTGGTTCCAGG +
Preference number: 2 (lower is better)
Translates to: QRPLKIHRGRWTTRCLSYIAGSP*LCLGSR
Trigger: CCTGGAACCAAGGCACAGTCAAGGTGAACCAGCTAT...GTATGAGAGACATCGTGTTGTCCATCTACCTCTGTGTATCTTCAAAGGTCTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414717.5
3UTR-3UTR TCA 90 bp GTCCTAGCTACATTGCAACCCAAGGTGCCGGCTCCAAGCAGCAGACATTTGACATCCAACACATCAGTTTaGGATTTAGATCCACTGATG +
Preference number: 2 (lower is better)
Translates to: VLATLQPKVPAPSSRHLTSNTSV*DLDPLM
Trigger: CATCAGTGGATCTAAATCTCAAACTGATGTGTTGGA...TGTCAAATGTCTGCTGCTTGGAGCCGGCACCTTGGGTTGCAATGTAGCTAGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424071.5
ENST00000434066.6
3UTR-3UTR CCA 90 bp TCTACCCTACTAAATCCTACTGTTGTAAGGGTCAGCTCGACTCAATTTTCACTTTCAGCAGTCCTGCTCTaGCGATGGAGAGCTCCTCAG +
Preference number: 2 (lower is better)
Translates to: STLLNPTVVRVSSTQFSLSAVLL*RWRAPQ
Trigger: CTGAGGAGCTCTCCATCGCCAGAGCAGGACTGCTGA...AAGTGAAAATTGAGTCGAGCTGACCCTTACAACAGTAGGATTTAGTAGGGTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354449.7
3UTR-3UTR CCA 90 bp CTGTACTGGGCTTCCAAGCTTTGGCATTCAGGCCCCTATATTTTCTGTAGGAAAAGCTCACTCAGTCCTTaGTGGAAATCTGGCGTCACT +
Preference number: 2 (lower is better)
Translates to: LYWASKLWHSGPYIFCRKSSLSP*WKSGVT
Trigger: AGTGACGCCAGATTTCCACCAAGGACTGAGTGAGCT...TTTCCTACAGAAAATATAGGGGCCTGAATGCCAAAGCTTGGAAGCCCAGTACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000354449.7
3UTR CAA 90 bp TTCTATGAGAACACTGCATCTGCATTCATAGCCACGAGTTTGTTATaGCTACAGGCTACTGAGCGTCGTAACAGGAAAACCACCCACAGC +
Preference number: 2 (lower is better)
Translates to: FYENTASAFIATSLL*LQATERRNRKTTHS
Trigger: GCTGTGGGTGGTTTTCCTGTTACGACGCTCAGTAGCCTGTAGCAATAACAAACTCGTGGCTATGAATGCAGATGCAGTGTTCTCATAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354449.7
3UTR-3UTR TCA 90 bp GCTGCGGTGTGGGATGCTGGAGTTTGGCTGCAGGCTGACATCATTTATTTTTGCGGCTATCAGTCACTGTaGCAAGAAATAAAAACTGCA +
Preference number: 2 (lower is better)
Translates to: AAVWDAGVWLQADIIYFCGYQSL*QEIKTA
Trigger: TGCAGTTTTTATTTCTTGTCACAGTGACTGATAGCC...GCAAAAATAAATGATGTCAGCCTGCAGCCAAACTCCAGCATCCCACACCGCAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000354449.7
3UTR-3UTR TCA 90 bp TTGGAAGAAATCACTGTAGTGTTTAAGCAAGGAAACCAGCACCATGTTCTCATCCCACTGGCCCCTGAATaGGAGGTAAACTCTCTGGAA +
Preference number: 2 (lower is better)
Translates to: LEEITVVFKQGNQHHVLIPLAPE*EVNSLE
Trigger: TTCCAGAGAGTTTACCTCTCATTCAGGGGCCAGTGG...GATGAGAACATGGTGCTGGTTTCCTTGCTTAAACACTACAGTGATTTCTTCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418682.5
3UTR CAA 90 bp CAGTTATTCTATGAGAACACTGCATCTGCATTCATAGCCACGAGTTaGTTATTGCTACAGGCTACTGAGCGTCGTAACAGGAAAACCACC +
Preference number: 2 (lower is better)
Translates to: QLFYENTASAFIATS*LLLQATERRNRKTT
Trigger: GGTGGTTTTCCTGTTACGACGCTCAGTAGCCTGTAGCAATAACAAACTCGTGGCTATGAATGCAGATGCAGTGTTCTCATAGAATAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354449.7
3UTR-3UTR CCA 90 bp CAGAGACCTTTGAAGATACACAGAGGTAGATGGACAACACGATGTCTCTCATACTTCATGAATTCAGTCTaGTCAGGCTTGCAGTCTGCT +
Preference number: 2 (lower is better)
Translates to: QRPLKIHRGRWTTRCLSYFMNSV*SGLQSA
Trigger: AGCAGACTGCAAGCCTGACCAGACTGAATTCATGAA...GTATGAGAGACATCGTGTTGTCCATCTACCTCTGTGTATCTTCAAAGGTCTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414717.5
3UTR-3UTR TCA 90 bp GAAGAAATCACTGTAGTGTTTAAGCAAGGAAACCAGCACCATGTTCTCATCATAAAACCCACTGGCCCCTaGATGAGAGGTAAACTCTCT +
Preference number: 2 (lower is better)
Translates to: EEITVVFKQGNQHHVLIIKPTGP*MRGKLS
Trigger: AGAGAGTTTACCTCTCATTCAGGGGCCAGTGGGTTT...TATGATGAGAACATGGTGCTGGTTTCCTTGCTTAAACACTACAGTGATTTCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418682.5
3UTR-3UTR TCA 90 bp AAAGTAGGAACCAATCTCCAACACATCAGTTTGAGATTTAGATCCACTGATGACGGTCCATACATTCACTaGGGTTCACCATCCTTGGTC +
Preference number: 2 (lower is better)
Translates to: KVGTNLQHISLRFRSTDDGPYIH*GSPSLV
Trigger: GACCAAGGATGGTGAACCTCAGTGAATGTATGGACC...GTCATCAGTGGATCTAAATCTCAAACTGATGTGTTGGAGATTGGTTCCTACTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434066.6
3UTR CAA 90 bp ACCTTGTCCAAGTCTAAAGTAGGAACCAATCTCCAACACATCAGTTaGAGATTTAGATCCACTGATGACTCAGCTAACCTTTTAGGGTCC +
Preference number: 2 (lower is better)
Translates to: TLSKSKVGTNLQHIS*RFRSTDDSANLLGS
Trigger: GGACCCTAAAAGGTTAGCTGAGTCATCAGTGGATCTAAATCTCAAACTGATGTGTTGGAGATTGGTTCCTACTTTAGACTTGGACAAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424071.5
ENST00000434066.6
3UTR-3UTR TCA 90 bp GGGCAGGATAGCAAAACCAATAGTAGAAGTGGTACTTCTTTAGATCTGCAAATGAGAGGAGGAACTTGTTaGGGAGTACAGGGTTTTCAA +
Preference number: 2 (lower is better)
Translates to: GQDSKTNSRSGTSLDLQMRGGTC*GVQGFQ
Trigger: TTGAAAACCCTGTACTCCTCAACAAGTTCCTCCTCT...CATTTGCAGATCTAAAGAAGTACCACTTCTACTATTGGTTTTGCTATCCTGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418682.5
3UTR-3UTR GCA 90 bp AATCTCCAACACATCAGTTTGAGATTTAGATCCACTGATGACTCAGCTAACCTTCCATCCTTGGTCCCATaGCTCCTTTCTGGTTCTTTT +
Preference number: 2 (lower is better)
Translates to: NLQHISLRFRSTDDSANLPSLVP*LLSGSF
Trigger: AAAAGAACCAGAAAGGAGGCATGGGACCAAGGATGG...AAGGTTAGCTGAGTCATCAGTGGATCTAAATCTCAAACTGATGTGTTGGAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434066.6
3UTR-3UTR CCA 90 bp AGTCCTAGATATACTTACTGCTGGTACAGTTGTACTCTAAGATTGGTATTTGATGCTCTGGGCAGGAGCTaGTTGCTCATTTCCCCATTT +
Preference number: 2 (lower is better)
Translates to: SPRYTYCWYSCTLRLVFDALGRS*LLISPF
Trigger: AAATGGGGAAATGAGCAACCAGCTCCTGCCCAGAGC...ATCAAATACCAATCTTAGAGTACAACTGTACCAGCAGTAAGTATATCTAGGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354449.7
3UTR-3UTR TCA 90 bp ATCACTGTAGTGTTTAAGCAAGGAAACCAGCACCATGTTCTCATCATACTTGATGTGACTCCTTCTGTTTaGCAAAGATTATCATATGCA +
Preference number: 2 (lower is better)
Translates to: ITVVFKQGNQHHVLIILDVTPSV*QRLSYA
Trigger: TGCATATGATAATCTTTGTCAAACAGAAGGAGTCAC...ATCAAGTATGATGAGAACATGGTGCTGGTTTCCTTGCTTAAACACTACAGTGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418682.5
3UTR TCA 72 bp GGAGCCTGCGGTGCGGTGGGCAGCACATTCCGGGGATaGGGGTGCCACCTCCCGCAGTGGCTCTGGGCAGGA +
Preference number: 3 (lower is better)
Translates to: GACGAVGSTFRG*GCHLPQWLWAG
Trigger: TCCTGCCCAGAGCCACTGCGGGAGGTGGCACCCTCATCCCCGGAATGTGCTGCCCACCGCACCGCAGGCTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354449.7
3UTR GCA 72 bp GGGGCCCAGAATCACCAGGCCTGGGGTCAGCAGTCCTaGTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCG +
Preference number: 3 (lower is better)
Translates to: GAQNHQAWGQQS*SGDGELLSRRP
Trigger: CGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAGGACTGCTGACCCCAGGCCTGGTGATTCTGGGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
3UTR GCA 72 bp GTTTCAGCGCCAGGCTGGGTGGGCGGACTCGGGCCCTaGACCTGTGCCGGCTGTGTCCCCATGAAGCTCCCA +
Preference number: 3 (lower is better)
Translates to: VSAPGWVGGLGP*TCAGCVPMKLP
Trigger: TGGGAGCTTCATGGGGACACAGCCGGCACAGGTGCAGGGCCCGAGTCCGCCCACCCAGCCTGGCGCTGAAAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354449.7
3UTR GCA 72 bp GGGAGGGGTCGGCGGTGCTGGCGGCCGGGTCCCTGGTaGACTGACCTATCTGGGATAGGCAGTACCCTGGAG +
Preference number: 3 (lower is better)
Translates to: GRGRRCWRPGPW*TDLSGIGSTLE
Trigger: CTCCAGGGTACTGCCTATCCCAGATAGGTCAGTGCACCAGGGACCCGGCCGCCAGCACCGCCGACCCCTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354449.7
3UTR CCA 72 bp CCAGAATCACCAGGCCTGGGGTCAGCAGTCCTGCTCTaGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAG +
Preference number: 3 (lower is better)
Translates to: PESPGLGSAVLL*RWRAPQQAAGE
Trigger: CTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAGGACTGCTGACCCCAGGCCTGGTGATTCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
3UTR CCA 72 bp TCTGGGAGGGGTCGGCGGTGCTGGCGGCCGGGTCCCTaGTGCACTGACCTATCTGGGATAGGCAGTACCCTG +
Preference number: 3 (lower is better)
Translates to: SGRGRRCWRPGP*CTDLSGIGSTL
Trigger: CAGGGTACTGCCTATCCCAGATAGGTCAGTGCACCAGGGACCCGGCCGCCAGCACCGCCGACCCCTCCCAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354449.7
3UTR TCA 72 bp CCACCTGGCCCACCAGAGGCTCACGACGATGGCACCTaGCCAGGTGACGTGGGCGTGGTCACCTCACCTGCA +
Preference number: 3 (lower is better)
Translates to: PPGPPEAHDDGT*PGDVGVVTSPA
Trigger: TGCAGGTGAGGTGACCACGCCCACGTCACCTGGTCAGGTGCCATCGTCGTGAGCCTCTGGTGGGCCAGGTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354449.7
3UTR GCA 72 bp AGTGAACAAGGGCGTCACTCTGGGAGGGGTCGGCGGTaGTGGCGGCCGGGTCCCTGGTGCACTGACCTATCT +
Preference number: 3 (lower is better)
Translates to: SEQGRHSGRGRR*WRPGPWCTDLS
Trigger: AGATAGGTCAGTGCACCAGGGACCCGGCCGCCAGCACCGCCGACCCCTCCCAGAGTGACGCCCTTGTTCACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354449.7
3UTR CCA 72 bp TCACCAGGCCTGGGGTCAGCAGTCCTGCTCTGGCGATaGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCA +
Preference number: 3 (lower is better)
Translates to: SPGLGSAVLLWR*RAPQQAAGEKS
Trigger: TGACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAGGACTGCTGACCCCAGGCCTGGTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
3UTR CCA 72 bp GGAGGCCAGCTCCTGGCAGGCCCTCGCGATGAGCAGTaGGTCAGCTGCGGTGTGGGATGCTGGAGTTTGGCT +
Preference number: 3 (lower is better)
Translates to: GGQLLAGPRDEQ*VSCGVGCWSLA
Trigger: AGCCAAACTCCAGCATCCCACACCGCAGCTGACCCACTGCTCATCGCGAGGGCCTGCCAGGAGCTGGCCTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354449.7
3UTR TCA 72 bp CCCACCAGAGGCTCACGACGATGGCACCTGACCAGGTaGCGTGGGCGTGGTCACCTCACCTGCAAGGCTTTG +
Preference number: 3 (lower is better)
Translates to: PTRGSRRWHLTR*RGRGHLTCKAL
Trigger: CAAAGCCTTGCAGGTGAGGTGACCACGCCCACGTCACCTGGTCAGGTGCCATCGTCGTGAGCCTCTGGTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354449.7
3UTR TCA 72 bp GGTGGAGGACACTCCTGGGACAGGTCTCTTTGTCAGTaGACAAGGGCGTCACTCTGGGAGGGGTCGGCGGTG +
Preference number: 3 (lower is better)
Translates to: GGGHSWDRSLCQ*TRASLWEGSAV
Trigger: CACCGCCGACCCCTCCCAGAGTGACGCCCTTGTTCACTGACAAAGAGACCTGTCCCAGGAGTGTCCTCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354449.7
3UTR CCA 72 bp AGCAGGAAAGACGATGCCCTCTACACGGGGGCAGGGTaGTCACAGGTACCTAGGCCATGGCCTCTCCTGGGT +
Preference number: 3 (lower is better)
Translates to: SRKDDALYTGAG*SQVPRPWPLLG
Trigger: ACCCAGGAGAGGCCATGGCCTAGGTACCTGTGACCACCCTGCCCCCGTGTAGAGGGCATCGTCTTTCCTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000354449.7
3UTR CCA 72 bp CAGAGGCTCACGACGATGGCACCTGACCAGGTGACGTaGGCGTGGTCACCTCACCTGCAAGGCTTTGTGGAC +
Preference number: 3 (lower is better)
Translates to: QRLTTMAPDQVT*AWSPHLQGFVD
Trigger: GTCCACAAAGCCTTGCAGGTGAGGTGACCACGCCCACGTCACCTGGTCAGGTGCCATCGTCGTGAGCCTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354449.7
3UTR-3UTR CAA 90 bp TCGATGAGCTGCTCCAGTTGCTCCACATCTCTGCGGGCTTGCTCCAGAGTGACAGCTGCTGCCAGAGCCTaGGGCTTACCACCCCCTAGG +
Preference number: 3 (lower is better)
Translates to: SMSCSSCSTSLRACSRVTAAARA*GLPPPR
Trigger: CCTAGGGGGTGGTAAGCCCAAGGCTCTGGCAGCAGC...TGTCACTCTGGAGCAAGCCCGCAGAGATGTGGAGCAACTGGAGCAGCTCATCGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424071.5
3UTR CCA 72 bp AGGGTGCCACCTCCCGCAGTGGCTCTGGGCAGGAGCTaGTTGCTCATTTCCCCATTTGGTCTGTGTTGGGTC +
Preference number: 3 (lower is better)
Translates to: RVPPPAVALGRS*LLISPFGLCWV
Trigger: GACCCAACACAGACCAAATGGGGAAATGAGCAACCAGCTCCTGCCCAGAGCCACTGCGGGAGGTGGCACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354449.7
3UTR CCA 72 bp CAGGCCCTCGCGATGAGCAGTGGGTCAGCTGCGGTGTaGGATGCTGGAGTTTGGCTGCAGGCTGACATCATT +
Preference number: 3 (lower is better)
Translates to: QALAMSSGSAAV*DAGVWLQADII
Trigger: AATGATGTCAGCCTGCAGCCAAACTCCAGCATCCCACACCGCAGCTGACCCACTGCTCATCGCGAGGGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354449.7
3UTR TCA 72 bp TGCACCTGTGCCGGCTGTGTCCCCATGAAGCTCCCATaGGCTGAACGACAGCCACTGGAACTTGGACTGGCT +
Preference number: 3 (lower is better)
Translates to: CTCAGCVPMKLP*AERQPLELGLA
Trigger: AGCCAGTCCAAGTTCCAGTGGCTGTCGTTCAGCTCATGGGAGCTTCATGGGGACACAGCCGGCACAGGTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354449.7
3UTR GCA 72 bp AGAAGGGGCTCCGTGAAGTTCTTCCCAGAGCCGCGCTaGCTGCAGTGCGCTCTGACCTTCTCTTCATGTGTG +
Preference number: 3 (lower is better)
Translates to: RRGSVKFFPEPR*LQCALTFSSCV
Trigger: CACACATGAAGAGAAGGTCAGAGCGCACTGCAGGCAGCGCGGCTCTGGGAAGAACTTCACGGAGCCCCTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354449.7
3UTR CCA 72 bp GGCAGAAAGCCATGTCTGAGCAGCTCACTCAGTCCTTaGTGGAAATCTGGCGTCACTGGGTCATGTGGGCCC +
Preference number: 3 (lower is better)
Translates to: GRKPCLSSSLSP*WKSGVTGSCGP
Trigger: GGGCCCACATGACCCAGTGACGCCAGATTTCCACCAAGGACTGAGTGAGCTGCTCAGACATGGCTTTCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354449.7
3UTR-3UTR CAA 90 bp GCTGCGGTGTGGGATGCTGGAGTTTGGCTGCAGGCTGACATCATTTATTTTTGCCCCATTTGGTCTGTGTaGGGTCACCCCCTCAGGGCC +
Preference number: 3 (lower is better)
Translates to: AAVWDAGVWLQADIIYFCPIWSV*GHPLRA
Trigger: GGCCCTGAGGGGGTGACCCAACACAGACCAAATGGG...GCAAAAATAAATGATGTCAGCCTGCAGCCAAACTCCAGCATCCCACACCGCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000354449.7
3UTR TCA 72 bp CTGTGCCGGCTGTGTCCCCATGAAGCTCCCATGAGCTaGACGACAGCCACTGGAACTTGGACTGGCTACTTT +
Preference number: 3 (lower is better)
Translates to: LCRLCPHEAPMS*TTATGTWTGYF
Trigger: AAAGTAGCCAGTCCAAGTTCCAGTGGCTGTCGTTCAGCTCATGGGAGCTTCATGGGGACACAGCCGGCACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354449.7
3UTR TCA 72 bp TTGACTGTGCCTTGGTTCCAGGCCCAAGTAGCCCCTTaGCTGGATTTAGAGGTTGAGTCCCTGGCAGTGGGG +
Preference number: 3 (lower is better)
Translates to: LTVPWFQAQVAP*LDLEVESLAVG
Trigger: CCCCACTGCCAGGGACTCAACCTCTAAATCCAGTCAAGGGGCTACTTGGGCCTGGAACCAAGGCACAGTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414717.5
3UTR TCA 72 bp CCAGGCCCAAGTAGCCCCTTGACTGGATTTAGAGGTTaGGTCCCTGGCAGTGGGGTAGCATCTTACAGGAAG +
Preference number: 3 (lower is better)
Translates to: PGPSSPLTGFRG*VPGSGVASYRK
Trigger: CTTCCTGTAAGATGCTACCCCACTGCCAGGGACTCAACCTCTAAATCCAGTCAAGGGGCTACTTGGGCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414717.5
3UTR GCA 72 bp ATGAGCTGCTCCAGTTGCTCCACATCTCTGCGGGCTTaGTCCAGAGTGACACTGGAGAAGTTCACTGGATGC +
Preference number: 3 (lower is better)
Translates to: MSCSSCSTSLRA*SRVTLEKFTGC
Trigger: GCATCCAGTGAACTTCTCCAGTGTCACTCTGGAGCAAGCCCGCAGAGATGTGGAGCAACTGGAGCAGCTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424071.5
3UTR CCA 72 bp TTGAATCCTCTGGCATTCACACCGGGGAATATTTTCTaGAGCCGGTCCGCTGCTGCCAGAGCCTTGGGCTTA +
Preference number: 3 (lower is better)
Translates to: LNPLAFTPGNIF*SRSAAARALGL
Trigger: TAAGCCCAAGGCTCTGGCAGCAGCGGACCGGCTCCAGAAAATATTCCCCGGTGTGAATGCCAGAGGATTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424071.5
3UTR GCA 72 bp AAGACGACATCATGGCTTTCGATGAGCTGCTCCAGTTaGTCCACATCTCTGCGGGCTTGCTCCAGAGTGACA +
Preference number: 3 (lower is better)
Translates to: KTTSWLSMSCSS*STSLRACSRVT
Trigger: TGTCACTCTGGAGCAAGCCCGCAGAGATGTGGAGCAACTGGAGCAGCTCATCGAAAGCCATGATGTCGTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424071.5
3UTR CCA 72 bp AGAAAGCCATGTCTGAGCAGCTCACTCAGTCCTTGGTaGAAATCTGGCGTCACTGGGTCATGTGGGCCCTTT +
Preference number: 3 (lower is better)
Translates to: RKPCLSSSLSPW*KSGVTGSCGPF
Trigger: AAAGGGCCCACATGACCCAGTGACGCCAGATTTCCACCAAGGACTGAGTGAGCTGCTCAGACATGGCTTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354449.7
3UTR CCA 72 bp GCGGGCTTGCTCCAGAGTGACACTGGAGAAGTTCACTaGATGCCCAGGCATAGGTATGCTCATGTTGAATCC +
Preference number: 3 (lower is better)
Translates to: AGLLQSDTGEVH*MPRHRYAHVES
Trigger: GGATTCAACATGAGCATACCTATGCCTGGGCATCCAGTGAACTTCTCCAGTGTCACTCTGGAGCAAGCCCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424071.5
3UTR-3UTR CAA 90 bp CACCGGGGAATATTTTCTGGAGCCGGTCCGCTGCTGCCAGAGCCTTGGGCTTACTTGACAGACACAACCTaGTCCAAGTCTAAAGTAGGA +
Preference number: 3 (lower is better)
Translates to: HRGIFSGAGPLLPEPWAYLTDTT*SKSKVG
Trigger: TCCTACTTTAGACTTGGACAAGGTTGTGTCTGTCAA...GTAAGCCCAAGGCTCTGGCAGCAGCGGACCGGCTCCAGAAAATATTCCCCGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424071.5
3UTR-3UTR CAA 90 bp TCCAGTTGCTCCACATCTCTGCGGGCTTGCTCCAGAGTGACACTGGAGAAGTTCCCAAGCAGCAGACATTaGACAGACACAACCTTGTCC +
Preference number: 3 (lower is better)
Translates to: SSCSTSLRACSRVTLEKFPSSRH*TDTTLS
Trigger: GGACAAGGTTGTGTCTGTCAAATGTCTGCTGCTTGG...GAACTTCTCCAGTGTCACTCTGGAGCAAGCCCGCAGAGATGTGGAGCAACTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424071.5
3UTR CCA 72 bp TCTCCTTGCCCCGCACACATTTCACTCCCACTGTACTaGGCTTCCAAGCTTTGGCATTCAGGCCCCTATATT +
Preference number: 3 (lower is better)
Translates to: SPCPAHISLPLY*ASKLWHSGPYI
Trigger: AATATAGGGGCCTGAATGCCAAAGCTTGGAAGCCCAGTACAGTGGGAGTGAAATGTGTGCGGGGCAAGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354449.7
3UTR-3UTR CAA 90 bp GAAAAGGTCGGAGGACTGGCTCTTGTAGTCACAGAGTGGCTGCAGGCCTTTGAAGAGGAAAACCAGCTCTaGCCTGAGTTACCCATGGTA +
Preference number: 3 (lower is better)
Translates to: EKVGGLALVVTEWLQAFEEENQL*PELPMV
Trigger: TACCATGGGTAACTCAGGCAAGAGCTGGTTTTCCTC...TTCAAAGGCCTGCAGCCACTCTGTGACTACAAGAGCCAGTCCTCCGACCTTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354449.7
3UTR TCA 72 bp TGTCCATCAATAGGAAGACGACATCATGGCTTTCGATaGGCTGCTCCAGTTGCTCCACATCTCTGCGGGCTT +
Preference number: 3 (lower is better)
Translates to: CPSIGRRHHGFR*AAPVAPHLCGL
Trigger: AAGCCCGCAGAGATGTGGAGCAACTGGAGCAGCTCATCGAAAGCCATGATGTCGTCTTCCTATTGATGGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424071.5
3UTR GCA 72 bp AATAATAAAGTGCTCTTAAACCACATAGTGTACGTGTaGAGTTTCAGCGCCAGGCTGGGTGGGCGGACTCGG +
Preference number: 3 (lower is better)
Translates to: NNKVLLNHIVYV*SFSARLGGRTR
Trigger: CCGAGTCCGCCCACCCAGCCTGGCGCTGAAACTGCACACGTACACTATGTGGTTTAAGAGCACTTTATTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354449.7
3UTR GCA 72 bp AGCAAGCATGACAGACACAGCTGTGGAGGTCACAGCTaGTCCTTTTTGGTCAATGAGCGTTTCTATCCCCTC +
Preference number: 3 (lower is better)
Translates to: SKHDRHSCGGHS*SFLVNERFYPL
Trigger: GAGGGGATAGAAACGCTCATTGACCAAAAAGGAGCAGCTGTGACCTCCACAGCTGTGTCTGTCATGCTTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000354449.7
3UTR CCA 72 bp GGCCAAGGCCAAGGTTATTATTTAGCTCTGAACTGGTaGTATCTTGAATCCCGAGCAACGCCGAACACTGGC +
Preference number: 3 (lower is better)
Translates to: GQGQGYYLALNW*YLESRATPNTG
Trigger: GCCAGTGTTCGGCGTTGCTCGGGATTCAAGATACCACCAGTTCAGAGCTAAATAATAACCTTGGCCTTGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354449.7
ENST00000354956.9
3UTR CCA 72 bp CTCTCCCTGGTGTCCATCAATAGGAAGACGACATCATaGCTTTCGATGAGCTGCTCCAGTTGCTCCACATCT +
Preference number: 3 (lower is better)
Translates to: LSLVSINRKTTS*LSMSCSSCSTS
Trigger: AGATGTGGAGCAACTGGAGCAGCTCATCGAAAGCCATGATGTCGTCTTCCTATTGATGGACACCAGGGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424071.5
3UTR TCA 72 bp CCAAGGTTATTATTTAGCTCTGAACTGGTGGTATCTTaGATCCCGAGCAACGCCGAACACTGGCCACTCCTG +
Preference number: 3 (lower is better)
Translates to: PRLLFSSELVVS*IPSNAEHWPLL
Trigger: CAGGAGTGGCCAGTGTTCGGCGTTGCTCGGGATTCAAGATACCACCAGTTCAGAGCTAAATAATAACCTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354449.7
ENST00000354956.9
3UTR TCA 72 bp AGTTCTTCCCAGAGCCGCGCTGCCTGCAGTGCGCTCTaGCCTTCTCTTCATGTGTGTAAATCTGTAATATAC +
Preference number: 3 (lower is better)
Translates to: SSSQSRAACSAL*PSLHVCKSVIY
Trigger: GTATATTACAGATTTACACACATGAAGAGAAGGTCAGAGCGCACTGCAGGCAGCGCGGCTCTGGGAAGAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354449.7
3UTR TCA 72 bp GTGAAAACCTTTGATCCAAACCCACTGGCCCCTGAATaGGAGGTAAACTCTCTGGAAGACAGAGGGCAGGAT +
Preference number: 3 (lower is better)
Translates to: VKTFDPNPLAPE*EVNSLEDRGQD
Trigger: ATCCTGCCCTCTGTCTTCCAGAGAGTTTACCTCTCATTCAGGGGCCAGTGGGTTTGGATCAAAGGTTTTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418682.5
3UTR CCA 72 bp CAAGGCCAAGGCCAAGGTTATTATTTAGCTCTGAACTaGTGGTATCTTGAATCCCGAGCAACGCCGAACACT +
Preference number: 3 (lower is better)
Translates to: QGQGQGYYLALN*WYLESRATPNT
Trigger: AGTGTTCGGCGTTGCTCGGGATTCAAGATACCACCAGTTCAGAGCTAAATAATAACCTTGGCCTTGGCCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354449.7
ENST00000354956.9
3UTR CCA 72 bp TTATTACAGAGACCTTTGAAGATACACAGAGGTAGATaGACAACACGATGTCTCTCATACCTCCCCAGCCCC +
Preference number: 3 (lower is better)
Translates to: LLQRPLKIHRGR*TTRCLSYLPSP
Trigger: GGGGCTGGGGAGGTATGAGAGACATCGTGTTGTCCATCTACCTCTGTGTATCTTCAAAGGTCTCTGTAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414717.5
3UTR-3UTR CAA 90 bp ATCAATAGGAAGACGACATCATGGCTTTCGATGAGCTGCTCCAGTTGCTCCACAATAGGTATGCTCATGTaGAATCCTCTGGCATTCACA +
Preference number: 3 (lower is better)
Translates to: INRKTTSWLSMSCSSCSTIGMLM*NPLAFT
Trigger: TGTGAATGCCAGAGGATTCAACATGAGCATACCTAT...TGTGGAGCAACTGGAGCAGCTCATCGAAAGCCATGATGTCGTCTTCCTATTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424071.5
3UTR GCA 72 bp GGAATTCATGAATTCAGTCTGGTCAGGCTTGCAGTCTaGTCAAGTACCATGATGTATCATGTGCCTCATTCT +
Preference number: 3 (lower is better)
Translates to: GIHEFSLVRLAV*SSTMMYHVPHS
Trigger: AGAATGAGGCACATGATACATCATGGTACTTGAGCAGACTGCAAGCCTGACCAGACTGAATTCATGAATTCC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414717.5
3UTR CCA 72 bp TCTGTGATATGGTGTTTTATACGCTTCCTCGTACGCTaGGGCCAAGGCAGTATACATTCCTCTGACTTTATA +
Preference number: 3 (lower is better)
Translates to: SVIWCFIRFLVR*GQGSIHSSDFI
Trigger: TATAAAGTCAGAGGAATGTATACTGCCTTGGCCCCAGCGTACGAGGAAGCGTATAAAACACCATATCACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354449.7
3UTR-3UTR CAA 90 bp CTGTACTGGGCTTCCAAGCTTTGGCATTCAGGCCCCTATATTTTCTGTAGGAAAGAAGCGAAGCCTCATTaGAAATCTACCCTACTAAAT +
Preference number: 3 (lower is better)
Translates to: LYWASKLWHSGPYIFCRKEAKPH*KSTLLN
Trigger: ATTTAGTAGGGTAGATTTCAAATGAGGCTTCGCTTC...TTTCCTACAGAAAATATAGGGGCCTGAATGCCAAAGCTTGGAAGCCCAGTACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354449.7
3UTR-3UTR CAA 90 bp ACCTTGGAAGAAATCACTGTAGTGTTTAAGCAAGGAAACCAGCACCATGTTCTCAAGAGGAGGAACTTGTaGAGGAGTACAGGGTTTTCA +
Preference number: 3 (lower is better)
Translates to: TLEEITVVFKQGNQHHVLKRRNL*RSTGFS
Trigger: TGAAAACCCTGTACTCCTCAACAAGTTCCTCCTCTT...GAGAACATGGTGCTGGTTTCCTTGCTTAAACACTACAGTGATTTCTTCCAAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418682.5
3UTR-3UTR CAA 90 bp AGGTATGCTCATGTTGAATCCTCTGGCATTCACACCGGGGAATATTTTCTGGAGCTCCAACACATCAGTTaGAGATTTAGATCCACTGAT +
Preference number: 3 (lower is better)
Translates to: RYAHVESSGIHTGEYFLELQHIS*RFRSTD
Trigger: ATCAGTGGATCTAAATCTCAAACTGATGTGTTGGAG...CTCCAGAAAATATTCCCCGGTGTGAATGCCAGAGGATTCAACATGAGCATACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424071.5
3UTR-3UTR CAA 90 bp CTTATGGAACAAAGCAGCCAAGAATCAGATGGGCGAGGAATAAAAGATTCCATTGATTCTTCCGTCCATTaGTTTATGTTCTGCCTCTCC +
Preference number: 3 (lower is better)
Translates to: LMEQSSQESDGRGIKDSIDSSVH*FMFCLS
Trigger: GGAGAGGCAGAACATAAACAAATGGACGGAAGAATC...AATGGAATCTTTTATTCCTCGCCCATCTGATTCTTGGCTGCTTTGTTCCATAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427759.5
3UTR GCA 72 bp AGATGGGCGAGGAATAAAAGATTCCATTCACAGAAGTaGTTGATTCTTCCGTCCATTTGTTTATGTTCTGCC +
Preference number: 3 (lower is better)
Translates to: RWARNKRFHSQK*LILPSICLCSA
Trigger: GGCAGAACATAAACAAATGGACGGAAGAATCAAGCACTTCTGTGAATGGAATCTTTTATTCCTCGCCCATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427759.5
3UTR-3UTR CAA 90 bp AGTCCTAGATATACTTACTGCTGGTACAGTTGTACTCTAAGATTGGTATTTGATGCCACGAGTTTGTTATaGCTACAGGCTACTGAGCGT +
Preference number: 3 (lower is better)
Translates to: SPRYTYCWYSCTLRLVFDATSLL*LQATER
Trigger: ACGCTCAGTAGCCTGTAGCAATAACAAACTCGTGGC...ATCAAATACCAATCTTAGAGTACAACTGTACCAGCAGTAAGTATATCTAGGACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR GCA 90 bp TGGGGTCAGCAGTCCTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGCCCCATCCAGGCAGCTaGCAGGATCTGCCCCTGGGC +
Preference number: 4 (lower is better)
Translates to: WGQQSCSGDGELLSRRPGPHPGS*QDLPLG
Trigger: GCCCAGGGGCAGATCCTGGCAGCTGCCTGGATGGGG...CCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAGGACTGCTGACCCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR GCA 90 bp CTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCAGCCCCACAGCGGAGCCGGTCCGCTGCTaGCAGAGCCTTGGGCTTACC +
Preference number: 4 (lower is better)
Translates to: LAMESSSAGGRGEVSPTAEPVRC*QSLGLT
Trigger: GGTAAGCCCAAGGCTCTGGCAGCAGCGGACCGGCTC...CGCTGTGGGGCTGACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR GCA 90 bp TGGGGTCAGCAGTCCTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGGAGCCGGTCCGCTGCTaGCAGAGCCTTGGGCTTACC +
Preference number: 4 (lower is better)
Translates to: WGQQSCSGDGELLSRRPGEPVRC*QSLGLT
Trigger: GGTAAGCCCAAGGCTCTGGCAGCAGCGGACCGGCTC...CCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAGGACTGCTGACCCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR GCA 90 bp AGCCTGCGGTGCGGTGGGCAGCACATTCCGGGGATGAGGGTGCCACCTCCCGCACTGGAGCCGGTCCGCTaGTGCCAGAGCCTTGGGCTT +
Preference number: 4 (lower is better)
Translates to: SLRCGGQHIPGMRVPPPALEPVR*CQSLGL
Trigger: AAGCCCAAGGCTCTGGCAGCAGCGGACCGGCTCCAG...TGCGGGAGGTGGCACCCTCATCCCCGGAATGTGCTGCCCACCGCACCGCAGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR GCA 90 bp TGGGGTCAGCAGTCCTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGCTGGAGCCGGTCCGCTaGTGCCAGAGCCTTGGGCTT +
Preference number: 4 (lower is better)
Translates to: WGQQSCSGDGELLSRRPGLEPVR*CQSLGL
Trigger: AAGCCCAAGGCTCTGGCAGCAGCGGACCGGCTCCAG...CCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAGGACTGCTGACCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR GCA 90 bp CTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCAGCCCCACAGCGCACGGCCAGGGCTCCTaGAATCACGGCCAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: LAMESSSAGGRGEVSPTAHGQGS*NHGQSW
Trigger: CCAGGACTGGCCGTGATTGCAGGAGCCCTGGCCGTG...CGCTGTGGGGCTGACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR GCA 90 bp AGTCCTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCAGCCCACCAGGGCCAGGGTaGAGTGCGCTCACGGGGTCC +
Preference number: 4 (lower is better)
Translates to: SPALAMESSSAGGRGEVSPPGPG*SALTGS
Trigger: GGACCCCGTGAGCGCACTGCACCCTGGCCCTGGTGG...GCTGACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAGGACT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR TCA 90 bp TGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCAGCCCCACAGCGGGGTCCGGTCTCTGGTTaGATCTCCTGGGGCCACCAC +
Preference number: 4 (lower is better)
Translates to: WRWRAPQQAAGEKSAPQRGPVSG*ISWGHH
Trigger: GTGGTGGCCCCAGGAGATTCAACCAGAGACCGGACC...CCGCTGTGGGGCTGACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR TCA 90 bp AGCAGTCCTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCCATGGTAGAGCCGTCTaGCCCCTCCCTCGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: SSPALAMESSSAGGRGEVHGRAV*PLPRLG
Trigger: CCCCAGCCGAGGGAGGGGTCAGACGGCTCTACCATG...GACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAGGACTGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR GCA 90 bp GCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCAGCCCCACACGGGCCCTGCACCTGTaGCGGCTGTGTCCCCATGAA +
Preference number: 4 (lower is better)
Translates to: ALAMESSSAGGRGEVSPTRALHL*RLCPHE
Trigger: TTCATGGGGACACAGCCGGCACAGGTGCAGGGCCCG...TGTGGGGCTGACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR CCA 90 bp CTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCAGCCCCACAGCGCTGCTGCCAGAGCCTTaGGCTTACCACCCCCTAGGC +
Preference number: 4 (lower is better)
Translates to: LAMESSSAGGRGEVSPTALLPEP*AYHPLG
Trigger: GCCTAGGGGGTGGTAAGCCCAAGGCTCTGGCAGCAG...CGCTGTGGGGCTGACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR CCA 90 bp TCCCCCTGGGGTGTGCTGTGTCCCACCTGGCCCACCAGAGGCTCACGACGATGGACAAGGGCGTCACTCTaGGAGGGGTCGGCGGTGCTG +
Preference number: 4 (lower is better)
Translates to: SPWGVLCPTWPTRGSRRWTRASL*EGSAVL
Trigger: CAGCACCGCCGACCCCTCCCAGAGTGACGCCCTTGT...CCATCGTCGTGAGCCTCTGGTGGGCCAGGTGGGACACAGCACACCCCAGGGGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR TCA 90 bp CCTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCAGCCCCTCTTGCTTGCAGCAATaGCGGCAGGAAGCCACCGGC +
Preference number: 4 (lower is better)
Translates to: PALAMESSSAGGRGEVSPSCLQQ*RQEATG
Trigger: GCCGGTGGCTTCCTGCCGTCATTGCTGCAAGCAAGA...GGGGCTGACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR GCA 90 bp AGTCCTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCAGCCTGGAGCCGGTCCGCTaGTGCCAGAGCCTTGGGCTT +
Preference number: 4 (lower is better)
Translates to: SPALAMESSSAGGRGEVSLEPVR*CQSLGL
Trigger: AAGCCCAAGGCTCTGGCAGCAGCGGACCGGCTCCAG...GCTGACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAGGACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR GCA 90 bp AGTCCTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCAGCCACGGCCAGGGCTCCTaGAATCACGGCCAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: SPALAMESSSAGGRGEVSHGQGS*NHGQSW
Trigger: CCAGGACTGGCCGTGATTGCAGGAGCCCTGGCCGTG...GCTGACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAGGACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR GCA 90 bp AGCAGTCCTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCCACGGCCAGGGCTCCTaGAATCACGGCCAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: SSPALAMESSSAGGRGEVHGQGS*NHGQSW
Trigger: CCAGGACTGGCCGTGATTGCAGGAGCCCTGGCCGTG...GACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAGGACTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR GCA 90 bp CTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCAGCCCCACAGCGAGCTGCGGTGTGGGATaGTGGAGTTTGGCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: LAMESSSAGGRGEVSPTASCGVG*WSLAAG
Trigger: GCCTGCAGCCAAACTCCAGCATCCCACACCGCAGCT...CGCTGTGGGGCTGACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR CCA 90 bp CCCCACAGGAGGAGCCTGCGGTGCGGTGGGCAGCACATTCCGGGGATGAGGGTGCCAGACCTCGGGGTATaGAGGAGGGGCCCAGAATCA +
Preference number: 4 (lower is better)
Translates to: PHRRSLRCGGQHIPGMRVPDLGV*RRGPES
Trigger: TGATTCTGGGCCCCTCCTCCATACCCCGAGGTCTGG...CACCCTCATCCCCGGAATGTGCTGCCCACCGCACCGCAGGCTCCTCCTGTGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR CCA 90 bp CTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCAGCCCCACAGCGCCAGACCTCGGGGTATaGAGGAGGGGCCCAGAATCA +
Preference number: 4 (lower is better)
Translates to: LAMESSSAGGRGEVSPTAPDLGV*RRGPES
Trigger: TGATTCTGGGCCCCTCCTCCATACCCCGAGGTCTGG...CGCTGTGGGGCTGACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR CCA 90 bp GCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCAGCCCCACACGGCCTTTCTGGGCCTaGCCTGCTCATAAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: ALAMESSSAGGRGEVSPTRPFWA*PAHKGR
Trigger: CCTGCCCTTATGAGCAGGCCAGGCCCAGAAAGGCCG...TGTGGGGCTGACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR CCA 90 bp TCCCCCTGGGGTGTGCTGTGTCCCACCTGGCCCACCAGAGGCTCACGACGATGGCCTCGCGATGAGCAGTaGGTCAGCTGCGGTGTGGGA +
Preference number: 4 (lower is better)
Translates to: SPWGVLCPTWPTRGSRRWPRDEQ*VSCGVG
Trigger: TCCCACACCGCAGCTGACCCACTGCTCATCGCGAGG...CCATCGTCGTGAGCCTCTGGTGGGCCAGGTGGGACACAGCACACCCCAGGGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR TCA 90 bp GCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCAGCCCCACATCTTGCTTGCAGCAATaGCGGCAGGAAGCCACCGGC +
Preference number: 4 (lower is better)
Translates to: ALAMESSSAGGRGEVSPTSCLQQ*RQEATG
Trigger: GCCGGTGGCTTCCTGCCGTCATTGCTGCAAGCAAGA...TGTGGGGCTGACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR TCA 90 bp CAGCAGTCCTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTGGTCCGGTCTCTGGTTaGATCTCCTGGGGCCACCAC +
Preference number: 4 (lower is better)
Translates to: QQSCSGDGELLSRRPGRSGPVSG*ISWGHH
Trigger: GTGGTGGCCCCAGGAGATTCAACCAGAGACCGGACC...ACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAGGACTGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR TCA 90 bp TGCTGGCGGCCGGGTCCCTGGTGCACTGACCTATCTGGGATAGGCAGTACCCTGTGGCACCTGACCAGGTaGCGTGGGCGTGGTCACCTC +
Preference number: 4 (lower is better)
Translates to: CWRPGPWCTDLSGIGSTLWHLTR*RGRGHL
Trigger: GAGGTGACCACGCCCACGTCACCTGGTCAGGTGCCA...CAGGGTACTGCCTATCCCAGATAGGTCAGTGCACCAGGGACCCGGCCGCCAGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR GCA 90 bp TGGGGTCAGCAGTCCTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGCATTGCAACCCAAGGTaGCGGCTCCAAGCAGCAGAC +
Preference number: 4 (lower is better)
Translates to: WGQQSCSGDGELLSRRPGHCNPR*RLQAAD
Trigger: GTCTGCTGCTTGGAGCCGGCACCTTGGGTTGCAATG...CCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAGGACTGCTGACCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR GCA 90 bp AGGGGCCCAGAATCACCAGGCCTGGGGTCAGCAGTCCTGCTCTGGCGATGGAGAGAGCCGGTCCGCTGCTaGCAGAGCCTTGGGCTTACC +
Preference number: 4 (lower is better)
Translates to: RGPESPGLGSAVLLWRWREPVRC*QSLGLT
Trigger: GGTAAGCCCAAGGCTCTGGCAGCAGCGGACCGGCTC...TCTCCATCGCCAGAGCAGGACTGCTGACCCCAGGCCTGGTGATTCTGGGCCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR GCA 90 bp TCCCCCTGGGGTGTGCTGTGTCCCACCTGGCCCACCAGAGGCTCACGACGATGGTGGGGTCAGCAGTCCTaGTCTGGCGATGGAGAGCTC +
Preference number: 4 (lower is better)
Translates to: SPWGVLCPTWPTRGSRRWWGQQS*SGDGEL
Trigger: GAGCTCTCCATCGCCAGAGCAGGACTGCTGACCCCA...CCATCGTCGTGAGCCTCTGGTGGGCCAGGTGGGACACAGCACACCCCAGGGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR GCA 90 bp CTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCAGCCCCATGGGGTCAGCAGTCCTaGTCTGGCGATGGAGAGCTC +
Preference number: 4 (lower is better)
Translates to: LLWRWRAPQQAAGEKSAPWGQQS*SGDGEL
Trigger: GAGCTCTCCATCGCCAGAGCAGGACTGCTGACCCCA...TGGGGCTGACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR CCA 90 bp AGGGGCTCCGTGAAGTTCTTCCCAGAGCCGCGCTGCCTGCAGTGCGCTCTGACCTGGGCAGCAACGGGCTaGGGTGGGAGCACTCATGTC +
Preference number: 4 (lower is better)
Translates to: RGSVKFFPEPRCLQCALTWAATG*GGSTHV
Trigger: GACATGAGTGCTCCCACCCCAGCCCGTTGCTGCCCA...GGTCAGAGCGCACTGCAGGCAGCGCGGCTCTGGGAAGAACTTCACGGAGCCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR CCA 90 bp AGCAGTCCTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCTGGGCAGCAACGGGCTaGGGTGGGAGCACTCATGTC +
Preference number: 4 (lower is better)
Translates to: SSPALAMESSSAGGRGEVWAATG*GGSTHV
Trigger: GACATGAGTGCTCCCACCCCAGCCCGTTGCTGCCCA...GACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAGGACTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR CCA 90 bp TGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCAGCCCCACAGCGGCTCTCGCCCCCTGCATaGTACGGTCACGGAAGCAAA +
Preference number: 4 (lower is better)
Translates to: WRWRAPQQAAGEKSAPQRLSPPA*YGHGSK
Trigger: TTTGCTTCCGTGACCGTACCATGCAGGGGGCGAGAG...CCGCTGTGGGGCTGACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR CCA 90 bp AGCAGTCCTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCCTGCTGCCAGAGCCTTaGGCTTACCACCCCCTAGGC +
Preference number: 4 (lower is better)
Translates to: SSPALAMESSSAGGRGEVLLPEP*AYHPLG
Trigger: GCCTAGGGGGTGGTAAGCCCAAGGCTCTGGCAGCAG...GACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAGGACTGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR CCA 90 bp GCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCAGCCCCACACCGGGGAATATTTTCTaGAGCCGGTCCGCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: ALAMESSSAGGRGEVSPTPGNIF*SRSAAA
Trigger: GGCAGCAGCGGACCGGCTCCAGAAAATATTCCCCGG...TGTGGGGCTGACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR CCA 90 bp TGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCAGCCCCACAGCGGCCAAGGTCCGGTCTCTaGTTGAATCTCCTGGGGCCA +
Preference number: 4 (lower is better)
Translates to: WRWRAPQQAAGEKSAPQRPRSGL*LNLLGP
Trigger: TGGCCCCAGGAGATTCAACCAGAGACCGGACCTTGG...CCGCTGTGGGGCTGACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR CCA 90 bp CCTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCAGCCCCCTCACAGTGCACTGCTaGTCCAAGGTCCGGTCTCTG +
Preference number: 4 (lower is better)
Translates to: PALAMESSSAGGRGEVSPLTVHC*SKVRSL
Trigger: CAGAGACCGGACCTTGGACCAGCAGTGCACTGTGAG...GGGGCTGACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR CCA 90 bp TGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCAGCCCCACAGCGGCTCACAGTGCACTGCTaGTCCAAGGTCCGGTCTCTG +
Preference number: 4 (lower is better)
Translates to: WRWRAPQQAAGEKSAPQRLTVHC*SKVRSL
Trigger: CAGAGACCGGACCTTGGACCAGCAGTGCACTGTGAG...CCGCTGTGGGGCTGACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR CCA 90 bp AGCAGTCCTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCGTCCTGCTCTGGCGATaGAGAGCTCCTCAGCAGGCG +
Preference number: 4 (lower is better)
Translates to: SSPALAMESSSAGGRGEVVLLWR*RAPQQA
Trigger: CGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAGGAC...GACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAGGACTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR CCA 90 bp GGGGCCCAGAATCACCAGGCCTGGGGTCAGCAGTCCTGCTCTGGCGATGGAGAGCCTGACCAGGTGACGTaGGCGTGGTCACCTCACCTG +
Preference number: 4 (lower is better)
Translates to: GAQNHQAWGQQSCSGDGEPDQVT*AWSPHL
Trigger: CAGGTGAGGTGACCACGCCCACGTCACCTGGTCAGG...CTCTCCATCGCCAGAGCAGGACTGCTGACCCCAGGCCTGGTGATTCTGGGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR CCA 90 bp AGCAGTCCTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCGTGCTGTGTCCCACCTaGCCCACCAGAGGCTCACGA +
Preference number: 4 (lower is better)
Translates to: SSPALAMESSSAGGRGEVVLCPT*PTRGSR
Trigger: TCGTGAGCCTCTGGTGGGCCAGGTGGGACACAGCAC...GACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAGGACTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR TCA 90 bp GCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCAGCCCCACAAATCCCCGGATCTGGTaGGGCACAAGCCCAAGAGAG +
Preference number: 4 (lower is better)
Translates to: ALAMESSSAGGRGEVSPTNPRIW*GTSPRE
Trigger: CTCTCTTGGGCTTGTGCCTCACCAGATCCGGGGATT...TGTGGGGCTGACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354449.7
ENST00000446450.6
CDS-3UTR TCA 90 bp AGCCTGCGGTGCGGTGGGCAGCACATTCCGGGGATGAGGGTGCCACCTCCCGCAGAAGCTCCCATGAGCTaGACGACAGCCACTGGAACT +
Preference number: 4 (lower is better)
Translates to: SLRCGGQHIPGMRVPPPAEAPMS*TTATGT
Trigger: AGTTCCAGTGGCTGTCGTTCAGCTCATGGGAGCTTC...TGCGGGAGGTGGCACCCTCATCCCCGGAATGTGCTGCCCACCGCACCGCAGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR TCA 90 bp CAGCAGTCCTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTAAAACCACCCACAGCTaGCCGGCTCGGTGGAGGACA +
Preference number: 4 (lower is better)
Translates to: QQSCSGDGELLSRRPGRSKTTHS*PARWRT
Trigger: TGTCCTCCACCGAGCCGGTCAGCTGTGGGTGGTTTT...ACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAGGACTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR GCA 90 bp CAGCAGTCCTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTACGTCTCTCGCCCCCTaGATGGTACGGTCACGGAAG +
Preference number: 4 (lower is better)
Translates to: QQSCSGDGELLSRRPGRSTSLAP*MVRSRK
Trigger: CTTCCGTGACCGTACCATGCAGGGGGCGAGAGACGT...ACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAGGACTGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR GCA 90 bp GCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCAGCCCCACACATTGCAACCCAAGGTaGCGGCTCCAAGCAGCAGAC +
Preference number: 4 (lower is better)
Translates to: ALAMESSSAGGRGEVSPTHCNPR*RLQAAD
Trigger: GTCTGCTGCTTGGAGCCGGCACCTTGGGTTGCAATG...TGTGGGGCTGACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR GCA 90 bp CCTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCAGCCCCATGAGCTGCTCCAGTTaGTCCACATCTCTGCGGGCT +
Preference number: 4 (lower is better)
Translates to: PALAMESSSAGGRGEVSPMSCSS*STSLRA
Trigger: AGCCCGCAGAGATGTGGAGCAACTGGAGCAGCTCAT...GGGGCTGACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR GCA 90 bp CTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCAGCCCCACGACTCACAGTGCACTaGTGGTCCAAGGTCCGGTCT +
Preference number: 4 (lower is better)
Translates to: LLWRWRAPQQAAGEKSAPRLTVH*WSKVRS
Trigger: AGACCGGACCTTGGACCAGCAGTGCACTGTGAGTCG...TGGGGCTGACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR GCA 90 bp GCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCAGCCCCACACGACTCACAGTGCACTaGTGGTCCAAGGTCCGGTCT +
Preference number: 4 (lower is better)
Translates to: ALAMESSSAGGRGEVSPTRLTVH*WSKVRS
Trigger: AGACCGGACCTTGGACCAGCAGTGCACTGTGAGTCG...TGTGGGGCTGACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR GCA 90 bp GCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCAGCCCCACACTGGACGACTCACAGTaGACTGCTGGTCCAAGGTCC +
Preference number: 4 (lower is better)
Translates to: ALAMESSSAGGRGEVSPTLDDSQ*TAGPRS
Trigger: GGACCTTGGACCAGCAGTGCACTGTGAGTCGTCCAG...TGTGGGGCTGACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR GCA 90 bp GCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCAGCCCCACATCCGATCGTCACTGCTaGTGGCAATGGCATAGCCCC +
Preference number: 4 (lower is better)
Translates to: ALAMESSSAGGRGEVSPTSDRHC*WQWHSP
Trigger: GGGGCTATGCCATTGCCAGCAGCAGTGACGATCGGA...TGTGGGGCTGACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR GCA 90 bp AGCAGTCCTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCCGGCCGGGTCCCTGGTaGACTGACCTATCTGGGATA +
Preference number: 4 (lower is better)
Translates to: SSPALAMESSSAGGRGEVRPGPW*TDLSGI
Trigger: TATCCCAGATAGGTCAGTGCACCAGGGACCCGGCCG...GACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAGGACTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR GCA 90 bp CCCCACAGGAGGAGCCTGCGGTGCGGTGGGCAGCACATTCCGGGGATGAGGGTGCGTGGTCACCTCACCTaGAAGGCTTTGTGGACTCTG +
Preference number: 4 (lower is better)
Translates to: PHRRSLRCGGQHIPGMRVRGHLT*KALWTL
Trigger: CAGAGTCCACAAAGCCTTGCAGGTGAGGTGACCACG...CACCCTCATCCCCGGAATGTGCTGCCCACCGCACCGCAGGCTCCTCCTGTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR CCA 90 bp CCTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCAGCCCCAGCAACGGGCTGGGGTaGGAGCACTCATGTCAAAAG +
Preference number: 4 (lower is better)
Translates to: PALAMESSSAGGRGEVSPSNGLG*EHSCQK
Trigger: CTTTTGACATGAGTGCTCCCACCCCAGCCCGTTGCT...GGGGCTGACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR CCA 90 bp CTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCAGCCCCACAGTGTTCCAATAGCTaGGCAGCAACGGGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: LLWRWRAPQQAAGEKSAPQCSNS*AATGWG
Trigger: ACCCCAGCCCGTTGCTGCCCAGCTATTGGAACACTG...TGGGGCTGACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR CCA 90 bp CTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCAGCCCCACTCTCGCCCCCTGCATaGTACGGTCACGGAAGCAAA +
Preference number: 4 (lower is better)
Translates to: LLWRWRAPQQAAGEKSAPLSPPA*YGHGSK
Trigger: TTTGCTTCCGTGACCGTACCATGCAGGGGGCGAGAG...TGGGGCTGACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR CCA 90 bp TGGGGTCAGCAGTCCTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGGCCACCGGCTCTCCCTaGTGTCCATCAATAGGAAGA +
Preference number: 4 (lower is better)
Translates to: WGQQSCSGDGELLSRRPGATGSP*CPSIGR
Trigger: TCTTCCTATTGATGGACACCAGGGAGAGCCGGTGGC...CCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAGGACTGCTGACCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR CCA 90 bp AGCCTGCGGTGCGGTGGGCAGCACATTCCGGGGATGAGGGTGCCACCTCCCGCAGCAGATGCCACAGGGTaGTTTGGACACAAGTCCCCA +
Preference number: 4 (lower is better)
Translates to: SLRCGGQHIPGMRVPPPAADATG*FGHKSP
Trigger: TGGGGACTTGTGTCCAAACCACCCTGTGGCATCTGC...TGCGGGAGGTGGCACCCTCATCCCCGGAATGTGCTGCCCACCGCACCGCAGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR CCA 90 bp CCTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCAGCCCCGCAGATGCCACAGGGTaGTTTGGACACAAGTCCCCA +
Preference number: 4 (lower is better)
Translates to: PALAMESSSAGGRGEVSPADATG*FGHKSP
Trigger: TGGGGACTTGTGTCCAAACCACCCTGTGGCATCTGC...GGGGCTGACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR CCA 90 bp CTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCAGCCCCACAGCGAATCACGGCCAGTCCTaGACGACTCACAGTGCACTG +
Preference number: 4 (lower is better)
Translates to: LAMESSSAGGRGEVSPTANHGQS*TTHSAL
Trigger: CAGTGCACTGTGAGTCGTCCAGGACTGGCCGTGATT...CGCTGTGGGGCTGACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR CCA 90 bp TGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCAGCCCCACAGCGGAATCACGGCCAGTCCTaGACGACTCACAGTGCACTG +
Preference number: 4 (lower is better)
Translates to: WRWRAPQQAAGEKSAPQRNHGQS*TTHSAL
Trigger: CAGTGCACTGTGAGTCGTCCAGGACTGGCCGTGATT...CCGCTGTGGGGCTGACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR CCA 90 bp CCTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCAGCCCCAATCACGGCCAGTCCTaGACGACTCACAGTGCACTG +
Preference number: 4 (lower is better)
Translates to: PALAMESSSAGGRGEVSPNHGQS*TTHSAL
Trigger: CAGTGCACTGTGAGTCGTCCAGGACTGGCCGTGATT...GGGGCTGACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR CCA 90 bp CTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCAGCCCCACAGCGGATCGTCACTGCTGCTaGCAATGGCATAGCCCCCTT +
Preference number: 4 (lower is better)
Translates to: LAMESSSAGGRGEVSPTADRHCC*QWHSPL
Trigger: AAGGGGGCTATGCCATTGCCAGCAGCAGTGACGATC...CGCTGTGGGGCTGACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR CCA 90 bp CAGCAGTCCTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTTACACGGGGGCAGGGTaGTCACAGGTACCTAGGCCA +
Preference number: 4 (lower is better)
Translates to: QQSCSGDGELLSRRPGRSYTGAG*SQVPRP
Trigger: TGGCCTAGGTACCTGTGACCACCCTGCCCCCGTGTA...ACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAGGACTGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR CCA 90 bp TGGTATCTTGAATCCCGAGCAACGCCGAACACTGGCCACTCCTGGGCAGCAGAGGTTTCAGCGCCAGGCTaGGTGGGCGGACTCGGGCCC +
Preference number: 4 (lower is better)
Translates to: WYLESRATPNTGHSWAAEVSAPG*VGGLGP
Trigger: GGGCCCGAGTCCGCCCACCCAGCCTGGCGCTGAAAC...CTCTGCTGCCCAGGAGTGGCCAGTGTTCGGCGTTGCTCGGGATTCAAGATACCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR CCA 90 bp CTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCAGCCCCACAGCGGGTGGAGGACACTCCTaGGACAGGTCTCTTTGTCAG +
Preference number: 4 (lower is better)
Translates to: LAMESSSAGGRGEVSPTAGGGHS*DRSLCQ
Trigger: CTGACAAAGAGACCTGTCCCAGGAGTGTCCTCCACC...CGCTGTGGGGCTGACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR TCA 90 bp CCTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCAGCCCCGCTTCACTTCGAAGATaGTGCTGTGGGCAACGTCTC +
Preference number: 4 (lower is better)
Translates to: PALAMESSSAGGRGEVSPASLRR*CCGQRL
Trigger: GAGACGTTGCCCACAGCATCATCTTCGAAGTGAAGC...GGGGCTGACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR TCA 90 bp TGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCAGCCCCACAGCGGGCTTCACTTCGAAGATaGTGCTGTGGGCAACGTCTC +
Preference number: 4 (lower is better)
Translates to: WRWRAPQQAAGEKSAPQRASLRR*CCGQRL
Trigger: GAGACGTTGCCCACAGCATCATCTTCGAAGTGAAGC...CCGCTGTGGGGCTGACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR TCA 90 bp CCTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCAGCCCCCATCATGGCTTTCGATaGGCTGCTCCAGTTGCTCCA +
Preference number: 4 (lower is better)
Translates to: PALAMESSSAGGRGEVSPHHGFR*AAPVAP
Trigger: TGGAGCAACTGGAGCAGCTCATCGAAAGCCATGATG...GGGGCTGACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR TCA 90 bp ATCTTGAATCCCGAGCAACGCCGAACACTGGCCACTCCTGGGCAGCAGAGGGGGGGTCCGGTCTCTGGTTaGATCTCCTGGGGCCACCAC +
Preference number: 4 (lower is better)
Translates to: ILNPEQRRTLATPGQQRGGPVSG*ISWGHH
Trigger: GTGGTGGCCCCAGGAGATTCAACCAGAGACCGGACC...CCCCCTCTGCTGCCCAGGAGTGGCCAGTGTTCGGCGTTGCTCGGGATTCAAGAT
63% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000354449.7
ENST00000354956.9
CDS-3UTR TCA 90 bp CTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCAGCCCCACAGCGGAACTGGTGGTATCTTaGATCCCGAGCAACGCCGAA +
Preference number: 4 (lower is better)
Translates to: LAMESSSAGGRGEVSPTAELVVS*IPSNAE
Trigger: TTCGGCGTTGCTCGGGATTCAAGATACCACCAGTTC...CGCTGTGGGGCTGACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354449.7
ENST00000354956.9
CDS-3UTR TCA 90 bp CAGCAGTCCTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTAATCCCCGGATCTGGTaGGGCACAAGCCCAAGAGAG +
Preference number: 4 (lower is better)
Translates to: QQSCSGDGELLSRRPGRSNPRIW*GTSPRE
Trigger: CTCTCTTGGGCTTGTGCCTCACCAGATCCGGGGATT...ACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAGGACTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354449.7
ENST00000446450.6
CDS-3UTR TCA 90 bp TGCTGGCGGCCGGGTCCCTGGTGCACTGACCTATCTGGGATAGGCAGTACCCTGCCGGCTGTGTCCCCATaGAGCTCCCATGAGCTGAAC +
Preference number: 4 (lower is better)
Translates to: CWRPGPWCTDLSGIGSTLPAVSP*SSHELN
Trigger: GTTCAGCTCATGGGAGCTTCATGGGGACACAGCCGG...CAGGGTACTGCCTATCCCAGATAGGTCAGTGCACCAGGGACCCGGCCGCCAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR GCA 90 bp GCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCAGCCCCACAAGGATCCCCCGTAGCTaGCGCCATTATTTCTTGCCG +
Preference number: 4 (lower is better)
Translates to: ALAMESSSAGGRGEVSPTRIPRS*RHYFLP
Trigger: CGGCAAGAAATAATGGCGGCAGCTACGGGGGATCCT...TGTGGGGCTGACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR GCA 90 bp GCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCAGCCCCACAACATCTCTGCGGGCTTaGTCCAGAGTGACACTGGAG +
Preference number: 4 (lower is better)
Translates to: ALAMESSSAGGRGEVSPTTSLRA*SRVTLE
Trigger: CTCCAGTGTCACTCTGGAGCAAGCCCGCAGAGATGT...TGTGGGGCTGACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR GCA 90 bp GCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCAGCCCCACAATGAGCTGCTCCAGTTaGTCCACATCTCTGCGGGCT +
Preference number: 4 (lower is better)
Translates to: ALAMESSSAGGRGEVSPTMSCSS*STSLRA
Trigger: AGCCCGCAGAGATGTGGAGCAACTGGAGCAGCTCAT...TGTGGGGCTGACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR GCA 90 bp CAGCAGTCCTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCTGGACGACTCACAGTaGACTGCTGGTCCAAGGTCC +
Preference number: 4 (lower is better)
Translates to: QQSCSGDGELLSRRPGRSLDDSQ*TAGPRS
Trigger: GGACCTTGGACCAGCAGTGCACTGTGAGTCGTCCAG...ACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAGGACTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR GCA 90 bp CTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCAGCCCCACAGCGTCATCCGATCGTCACTaGTGCTGGCAATGGCATAGC +
Preference number: 4 (lower is better)
Translates to: LAMESSSAGGRGEVSPTASSDRH*CWQWHS
Trigger: GCTATGCCATTGCCAGCAGCAGTGACGATCGGATGA...CGCTGTGGGGCTGACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR GCA 90 bp TGCTGGCGGCCGGGTCCCTGGTGCACTGACCTATCTGGGATAGGCAGTACCCTGCCGCGCTGCCTGCAGTaGGCTCTGACCTTCTCTTCA +
Preference number: 4 (lower is better)
Translates to: CWRPGPWCTDLSGIGSTLPRCLQ*ALTFSS
Trigger: TGAAGAGAAGGTCAGAGCGCACTGCAGGCAGCGCGG...CAGGGTACTGCCTATCCCAGATAGGTCAGTGCACCAGGGACCCGGCCGCCAGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR CCA 90 bp GTCAGCAGTCCTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAATCGAAGATGATGCTGTaGGCAACGTCTCTCGCCCCC +
Preference number: 4 (lower is better)
Translates to: VSSPALAMESSSAGGRGESKMML*ATSLAP
Trigger: GGGGGCGAGAGACGTTGCCCACAGCATCATCTTCGA...TTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAGGACTGCTGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR CCA 90 bp CCTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCAGCCCCCGGGGCCATCTCAGATaGTCTCATCATCGCTCATGT +
Preference number: 4 (lower is better)
Translates to: PALAMESSSAGGRGEVSPRGHLR*SHHRSC
Trigger: ACATGAGCGATGATGAGACCATCTGAGATGGCCCCG...GGGGCTGACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR CCA 90 bp TGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCAGCCCCACAGCGGCGGGGCCATCTCAGATaGTCTCATCATCGCTCATGT +
Preference number: 4 (lower is better)
Translates to: WRWRAPQQAAGEKSAPQRRGHLR*SHHRSC
Trigger: ACATGAGCGATGATGAGACCATCTGAGATGGCCCCG...CCGCTGTGGGGCTGACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR CCA 90 bp GTCAGCAGTCCTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAATCAGCAGTCCTGCTCTaGCGATGGAGAGCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: VSSPALAMESSSAGGRGESAVLL*RWRAPQ
Trigger: CTGAGGAGCTCTCCATCGCCAGAGCAGGACTGCTGA...TTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAGGACTGCTGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR CCA 90 bp AGCCTGCGGTGCGGTGGGCAGCACATTCCGGGGATGAGGGTGCCACCTCCCGCATCACTCAGTCCTTGGTaGAAATCTGGCGTCACTGGG +
Preference number: 4 (lower is better)
Translates to: SLRCGGQHIPGMRVPPPASLSPW*KSGVTG
Trigger: CCCAGTGACGCCAGATTTCCACCAAGGACTGAGTGA...TGCGGGAGGTGGCACCCTCATCCCCGGAATGTGCTGCCCACCGCACCGCAGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR TCA 90 bp GGGGCCCAGAATCACCAGGCCTGGGGTCAGCAGTCCTGCTCTGGCGATGGAGAGGGGCTTGCTCCAGAGTaGCACTGGAGAAGTTCACTG +
Preference number: 4 (lower is better)
Translates to: GAQNHQAWGQQSCSGDGEGLAPE*HWRSSL
Trigger: CAGTGAACTTCTCCAGTGTCACTCTGGAGCAAGCCC...CTCTCCATCGCCAGAGCAGGACTGCTGACCCCAGGCCTGGTGATTCTGGGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR TCA 90 bp CTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCAGCCCCACATCATGGCTTTCGATaGGCTGCTCCAGTTGCTCCA +
Preference number: 4 (lower is better)
Translates to: LLWRWRAPQQAAGEKSAPHHGFR*AAPVAP
Trigger: TGGAGCAACTGGAGCAGCTCATCGAAAGCCATGATG...TGGGGCTGACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR TCA 90 bp GGGGCCCAGAATCACCAGGCCTGGGGTCAGCAGTCCTGCTCTGGCGATGGAGAGGTTGGCAAAAAGCGATaGGCCCAGGAGGTCAGCAGA +
Preference number: 4 (lower is better)
Translates to: GAQNHQAWGQQSCSGDGEVGKKR*AQEVSR
Trigger: TCTGCTGACCTCCTGGGCTCATCGCTTTTTGCCAAC...CTCTCCATCGCCAGAGCAGGACTGCTGACCCCAGGCCTGGTGATTCTGGGCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR TCA 90 bp AGGGGCCCAGAATCACCAGGCCTGGGGTCAGCAGTCCTGCTCTGGCGATGGAGACCCATGAAGCTCCCATaGGCTGAACGACAGCCACTG +
Preference number: 4 (lower is better)
Translates to: RGPESPGLGSAVLLWRWRPMKLP*AERQPL
Trigger: CAGTGGCTGTCGTTCAGCTCATGGGAGCTTCATGGG...TCTCCATCGCCAGAGCAGGACTGCTGACCCCAGGCCTGGTGATTCTGGGCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR TCA 90 bp AGCCTGCGGTGCGGTGGGCAGCACATTCCGGGGATGAGGGTGCCACCTCCCGCACTCCTTTTTGGTCAATaGGCGTTTCTATCCCCTCCC +
Preference number: 4 (lower is better)
Translates to: SLRCGGQHIPGMRVPPPALLFGQ*AFLSPP
Trigger: GGGAGGGGATAGAAACGCTCATTGACCAAAAAGGAG...TGCGGGAGGTGGCACCCTCATCCCCGGAATGTGCTGCCCACCGCACCGCAGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR GCA 90 bp GTCAGCAGTCCTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAAGGATCCCCCGTAGCTaGCGCCATTATTTCTTGCCG +
Preference number: 4 (lower is better)
Translates to: VSSPALAMESSSAGGRGERIPRS*RHYFLP
Trigger: CGGCAAGAAATAATGGCGGCAGCTACGGGGGATCCT...TTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAGGACTGCTGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR GCA 90 bp TCTCACGCCCCAACCCATCAACGTCCTAGCTACATTGCAACCCAAGGTGCCGGCCTGGAGCCGGTCCGCTaGTGCCAGAGCCTTGGGCTT +
Preference number: 4 (lower is better)
Translates to: SHAPTHQRPSYIATQGAGLEPVR*CQSLGL
Trigger: AAGCCCAAGGCTCTGGCAGCAGCGGACCGGCTCCAG...GCCGGCACCTTGGGTTGCAATGTAGCTAGGACGTTGATGGGTTGGGGCGTGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424071.5
CDS-3UTR GCA 90 bp AGCAGTCCTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCATGAGCTGCTCCAGTTaGTCCACATCTCTGCGGGCT +
Preference number: 4 (lower is better)
Translates to: SSPALAMESSSAGGRGEVMSCSS*STSLRA
Trigger: AGCCCGCAGAGATGTGGAGCAACTGGAGCAGCTCAT...GACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAGGACTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR GCA 90 bp AGTCCTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCAGCCAGGAGGTCAGCAGATaGCACAGGGTGGTTTGGACA +
Preference number: 4 (lower is better)
Translates to: SPALAMESSSAGGRGEVSQEVSR*HRVVWT
Trigger: TGTCCAAACCACCCTGTGGCATCTGCTGACCTCCTG...GCTGACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAGGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR GCA 90 bp ATCTTGAATCCCGAGCAACGCCGAACACTGGCCACTCCTGGGCAGCAGAGGGGGTGGGGTCAGCAGTCCTaGTCTGGCGATGGAGAGCTC +
Preference number: 4 (lower is better)
Translates to: ILNPEQRRTLATPGQQRGWGQQS*SGDGEL
Trigger: GAGCTCTCCATCGCCAGAGCAGGACTGCTGACCCCA...CCCCCTCTGCTGCCCAGGAGTGGCCAGTGTTCGGCGTTGCTCGGGATTCAAGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354449.7
ENST00000354956.9
CDS-3UTR GCA 90 bp TGCTGGCGGCCGGGTCCCTGGTGCACTGACCTATCTGGGATAGGCAGTACCCTGAGAAAGCCCCCTCCCTaGTCTAAGAAGGGGCTCCGT +
Preference number: 4 (lower is better)
Translates to: CWRPGPWCTDLSGIGSTLRKPPP*SKKGLR
Trigger: ACGGAGCCCCTTCTTAGAGCAGGGAGGGGGCTTTCT...CAGGGTACTGCCTATCCCAGATAGGTCAGTGCACCAGGGACCCGGCCGCCAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR GCA 90 bp AGGGGCCCAGAATCACCAGGCCTGGGGTCAGCAGTCCTGCTCTGGCGATGGAGAAGGCTTTGTGGACTCTaGACACCGTATGACCCCCGG +
Preference number: 4 (lower is better)
Translates to: RGPESPGLGSAVLLWRWRRLCGL*TPYDPR
Trigger: CCGGGGGTCATACGGTGTGCAGAGTCCACAAAGCCT...TCTCCATCGCCAGAGCAGGACTGCTGACCCCAGGCCTGGTGATTCTGGGCCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR CCA 90 bp CTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCAGCCCCAGGCCATCCAGGGTACTaGGCTAAGTTACAGGGATCA +
Preference number: 4 (lower is better)
Translates to: LLWRWRAPQQAAGEKSAPGHPGY*AKLQGS
Trigger: TGATCCCTGTAACTTAGCCCAGTACCCTGGATGGCC...TGGGGCTGACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR CCA 90 bp GCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCAGCCCCACAGGCCATCCAGGGTACTaGGCTAAGTTACAGGGATCA +
Preference number: 4 (lower is better)
Translates to: ALAMESSSAGGRGEVSPTGHPGY*AKLQGS
Trigger: TGATCCCTGTAACTTAGCCCAGTACCCTGGATGGCC...TGTGGGGCTGACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR CCA 90 bp GCAGGCCCTCGCGATGAGCAGTGGGTCAGCTGCGGTGTGGGATGCTGGAGTTTGTCGAAGATGATGCTGTaGGCAACGTCTCTCGCCCCC +
Preference number: 4 (lower is better)
Translates to: AGPRDEQWVSCGVGCWSLSKMML*ATSLAP
Trigger: GGGGGCGAGAGACGTTGCCCACAGCATCATCTTCGA...CAAACTCCAGCATCCCACACCGCAGCTGACCCACTGCTCATCGCGAGGGCCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR CCA 90 bp CTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCAGCCCCAGAGGTTCACCATCCTTaGTCCCATGCCTCCTTTCTG +
Preference number: 4 (lower is better)
Translates to: LLWRWRAPQQAAGEKSAPEVHHP*SHASFL
Trigger: CAGAAAGGAGGCATGGGACCAAGGATGGTGAACCTC...TGGGGCTGACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR CCA 90 bp GCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCAGCCCCACAGAGGTTCACCATCCTTaGTCCCATGCCTCCTTTCTG +
Preference number: 4 (lower is better)
Translates to: ALAMESSSAGGRGEVSPTEVHHP*SHASFL
Trigger: CAGAAAGGAGGCATGGGACCAAGGATGGTGAACCTC...TGTGGGGCTGACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR CCA 90 bp CTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCAGCCCCACAGCGAGGAAGACGACATCATaGCTTTCGATGAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: LAMESSSAGGRGEVSPTARKTTS*LSMSCS
Trigger: GGAGCAGCTCATCGAAAGCCATGATGTCGTCTTCCT...CGCTGTGGGGCTGACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR CCA 90 bp GGGGCCCAGAATCACCAGGCCTGGGGTCAGCAGTCCTGCTCTGGCGATGGAGAGGCCACCGGCTCTCCCTaGTGTCCATCAATAGGAAGA +
Preference number: 4 (lower is better)
Translates to: GAQNHQAWGQQSCSGDGEATGSP*CPSIGR
Trigger: TCTTCCTATTGATGGACACCAGGGAGAGCCGGTGGC...CTCTCCATCGCCAGAGCAGGACTGCTGACCCCAGGCCTGGTGATTCTGGGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR CCA 90 bp GCAGGCCCTCGCGATGAGCAGTGGGTCAGCTGCGGTGTGGGATGCTGGAGTTTGCCAAGGTCCGGTCTCTaGTTGAATCTCCTGGGGCCA +
Preference number: 4 (lower is better)
Translates to: AGPRDEQWVSCGVGCWSLPRSGL*LNLLGP
Trigger: TGGCCCCAGGAGATTCAACCAGAGACCGGACCTTGG...CAAACTCCAGCATCCCACACCGCAGCTGACCCACTGCTCATCGCGAGGGCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR CCA 90 bp TGGGGTCAGCAGTCCTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGGGCATAGCCCCCTTCTaGATGCTGCAAAACAGATAC +
Preference number: 4 (lower is better)
Translates to: WGQQSCSGDGELLSRRPGGIAPF*MLQNRY
Trigger: GTATCTGTTTTGCAGCATCCAGAAGGGGGCTATGCC...CCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAGGACTGCTGACCCCA
62% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR CCA 90 bp ATCTTGAATCCCGAGCAACGCCGAACACTGGCCACTCCTGGGCAGCAGAGGGGGCCAGACCTCGGGGTATaGAGGAGGGGCCCAGAATCA +
Preference number: 4 (lower is better)
Translates to: ILNPEQRRTLATPGQQRGPDLGV*RRGPES
Trigger: TGATTCTGGGCCCCTCCTCCATACCCCGAGGTCTGG...CCCCCTCTGCTGCCCAGGAGTGGCCAGTGTTCGGCGTTGCTCGGGATTCAAGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354449.7
ENST00000354956.9
CDS-3UTR CCA 90 bp TGGTATCTTGAATCCCGAGCAACGCCGAACACTGGCCACTCCTGGGCAGCAGAGTGCCACCTCCCGCAGTaGCTCTGGGCAGGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: WYLESRATPNTGHSWAAECHLPQ*LWAGAG
Trigger: ACCAGCTCCTGCCCAGAGCCACTGCGGGAGGTGGCA...CTCTGCTGCCCAGGAGTGGCCAGTGTTCGGCGTTGCTCGGGATTCAAGATACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354449.7
3UTR CAA 72 bp CCGGCTCGGTGGAGGACACTCCTGGGACAGGTCTCTTaGTCAGTGAACAAGGGCGTCACTCTGGGAGGGGTC +
Preference number: 4 (lower is better)
Translates to: PARWRTLLGQVS*SVNKGVTLGGV
Trigger: GACCCCTCCCAGAGTGACGCCCTTGTTCACTGACAAAGAGACCTGTCCCAGGAGTGTCCTCCACCGAGCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR TCA 90 bp AGCAGTCCTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCCCACTGGCCCCTGAATaGGAGGTAAACTCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: SSPALAMESSSAGGRGEVPLAPE*EVNSLE
Trigger: TTCCAGAGAGTTTACCTCTCATTCAGGGGCCAGTGG...GACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAGGACTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354449.7
ENST00000354956.9
CDS-3UTR TCA 90 bp CAGCAGTCCTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTGCTTCACTTCGAAGATaGTGCTGTGGGCAACGTCTC +
Preference number: 4 (lower is better)
Translates to: QQSCSGDGELLSRRPGRSASLRR*CCGQRL
Trigger: GAGACGTTGCCCACAGCATCATCTTCGAAGTGAAGC...ACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAGGACTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR TCA 90 bp GCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCAGCCCCACAGGTCCATACATTCACTaGGGTTCACCATCCTTGGTC +
Preference number: 4 (lower is better)
Translates to: ALAMESSSAGGRGEVSPTGPYIH*GSPSLV
Trigger: GACCAAGGATGGTGAACCTCAGTGAATGTATGGACC...TGTGGGGCTGACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR TCA 90 bp CTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCAGCCCCACATTGTCCACAAATGTaGTGTGTCTCACGCCCCAAC +
Preference number: 4 (lower is better)
Translates to: LLWRWRAPQQAAGEKSAPHCPQM*CVSRPN
Trigger: GTTGGGGCGTGAGACACATCACATTTGTGGACAATG...TGGGGCTGACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR TCA 90 bp GTCAGCAGTCCTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAAAACCAGCTCTTGCCTaGGTTACCCATGGTAGAGCC +
Preference number: 4 (lower is better)
Translates to: VSSPALAMESSSAGGRGEKPALA*VTHGRA
Trigger: GGCTCTACCATGGGTAACTCAGGCAAGAGCTGGTTT...TTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAGGACTGCTGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR GCA 90 bp GCAGGCCCTCGCGATGAGCAGTGGGTCAGCTGCGGTGTGGGATGCTGGAGTTTGAGGATCCCCCGTAGCTaGCGCCATTATTTCTTGCCG +
Preference number: 4 (lower is better)
Translates to: AGPRDEQWVSCGVGCWSLRIPRS*RHYFLP
Trigger: CGGCAAGAAATAATGGCGGCAGCTACGGGGGATCCT...CAAACTCCAGCATCCCACACCGCAGCTGACCCACTGCTCATCGCGAGGGCCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR GCA 90 bp CTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCAGCCCCACAACAGACTGGAAACTaGTACTCCATCTGTGGGCTG +
Preference number: 4 (lower is better)
Translates to: LLWRWRAPQQAAGEKSAPQQTGN*YSICGL
Trigger: CAGCCCACAGATGGAGTAGCAGTTTCCAGTCTGTTG...TGGGGCTGACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR GCA 90 bp TGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCAGCCCCACAGCGGCCATCCTTGGTCCCATaGCTCCTTTCTGGTTCTTTT +
Preference number: 4 (lower is better)
Translates to: WRWRAPQQAAGEKSAPQRPSLVP*LLSGSF
Trigger: AAAAGAACCAGAAAGGAGGCATGGGACCAAGGATGG...CCGCTGTGGGGCTGACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR GCA 90 bp AGTCCTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCAGCGGGCCACCACATCATTaGAGAAGTAGCAGCCAAGCT +
Preference number: 4 (lower is better)
Translates to: SPALAMESSSAGGRGEVSGPPHH*RSSSQA
Trigger: AGCTTGGCTGCTACTTCTGCAATGATGTGGTGGCCC...GCTGACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAGGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR GCA 90 bp CAGCAGTCCTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTGGGCCACCACATCATTaGAGAAGTAGCAGCCAAGCT +
Preference number: 4 (lower is better)
Translates to: QQSCSGDGELLSRRPGRSGPPHH*RSSSQA
Trigger: AGCTTGGCTGCTACTTCTGCAATGATGTGGTGGCCC...ACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAGGACTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR GCA 90 bp TGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCAGCCCCACAGCGGTGTACATTTGTCAAATaGCAGGCTGACGGGAAGGAC +
Preference number: 4 (lower is better)
Translates to: WRWRAPQQAAGEKSAPQRCTFVK*QADGKD
Trigger: GTCCTTCCCGTCAGCCTGGCATTTGACAAATGTACA...CCGCTGTGGGGCTGACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354449.7
ENST00000446450.6
CDS-3UTR CCA 90 bp AGTCCTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCAGCGGCCATCCAGGGTACTaGGCTAAGTTACAGGGATCA +
Preference number: 4 (lower is better)
Translates to: SPALAMESSSAGGRGEVSGHPGY*AKLQGS
Trigger: TGATCCCTGTAACTTAGCCCAGTACCCTGGATGGCC...GCTGACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAGGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR CCA 90 bp TGGGGTCAGCAGTCCTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGCCCATGCCTCCTTTCTaGTTCTTTTCCCATCCAACT +
Preference number: 4 (lower is better)
Translates to: WGQQSCSGDGELLSRRPGPMPPF*FFSHPT
Trigger: AGTTGGATGGGAAAAGAACCAGAAAGGAGGCATGGG...CCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAGGACTGCTGACCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR CCA 90 bp AGGGGCCCAGAATCACCAGGCCTGGGGTCAGCAGTCCTGCTCTGGCGATGGAGAGCAGATGCCACAGGGTaGTTTGGACACAAGTCCCCA +
Preference number: 4 (lower is better)
Translates to: RGPESPGLGSAVLLWRWRADATG*FGHKSP
Trigger: TGGGGACTTGTGTCCAAACCACCCTGTGGCATCTGC...TCTCCATCGCCAGAGCAGGACTGCTGACCCCAGGCCTGGTGATTCTGGGCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR CCA 90 bp CCTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCAGCCCCTGTAACCAGGGATGTTaGCAAAAAGCGATGAGCCCA +
Preference number: 4 (lower is better)
Translates to: PALAMESSSAGGRGEVSPCNQGC*QKAMSP
Trigger: TGGGCTCATCGCTTTTTGCCAACATCCCTGGTTACA...GGGGCTGACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR CCA 90 bp AGGGGCTCCGTGAAGTTCTTCCCAGAGCCGCGCTGCCTGCAGTGCGCTCTGACCAAGGGGAAAGGATCCTaGGGGATGGCTATCAGTCAC +
Preference number: 4 (lower is better)
Translates to: RGSVKFFPEPRCLQCALTKGKGS*GMAISH
Trigger: GTGACTGATAGCCATCCCCCAGGATCCTTTCCCCTT...GGTCAGAGCGCACTGCAGGCAGCGCGGCTCTGGGAAGAACTTCACGGAGCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR CCA 90 bp GCTCTGAACTGGTGGTATCTTGAATCCCGAGCAACGCCGAACACTGGCCACTCCGAGCCTGCGGTGCGGTaGGCAGCACATTCCGGGGAT +
Preference number: 4 (lower is better)
Translates to: ALNWWYLESRATPNTGHSEPAVR*AAHSGD
Trigger: ATCCCCGGAATGTGCTGCCCACCGCACCGCAGGCTC...GGAGTGGCCAGTGTTCGGCGTTGCTCGGGATTCAAGATACCACCAGTTCAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR CCA 90 bp TGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCAGCCCCACAGCGGTTGGACTGGCTACTTTaGGAGAAGCGAAGCCTCATT +
Preference number: 4 (lower is better)
Translates to: WRWRAPQQAAGEKSAPQRLDWLL*EKRSLI
Trigger: AATGAGGCTTCGCTTCTCCCAAAGTAGCCAGTCCAA...CCGCTGTGGGGCTGACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR CCA 90 bp CTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCAGCCCCACTGAACGACAGCCACTaGAACTTGGACTGGCTACTT +
Preference number: 4 (lower is better)
Translates to: LLWRWRAPQQAAGEKSAPLNDSH*NLDWLL
Trigger: AAGTAGCCAGTCCAAGTTCCAGTGGCTGTCGTTCAG...TGGGGCTGACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR CCA 90 bp AGCCTGCGGTGCGGTGGGCAGCACATTCCGGGGATGAGGGTGCCACCTCCCGCATGGGCTTCCAAGCTTTaGCATTCAGGCCCCTATATT +
Preference number: 4 (lower is better)
Translates to: SLRCGGQHIPGMRVPPPAWASKL*HSGPYI
Trigger: AATATAGGGGCCTGAATGCCAAAGCTTGGAAGCCCA...TGCGGGAGGTGGCACCCTCATCCCCGGAATGTGCTGCCCACCGCACCGCAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR CCA 90 bp TGCTGGCGGCCGGGTCCCTGGTGCACTGACCTATCTGGGATAGGCAGTACCCTGCGCTTCCTCGTACGCTaGGGCCAAGGCAGTATACAT +
Preference number: 4 (lower is better)
Translates to: CWRPGPWCTDLSGIGSTLRFLVR*GQGSIH
Trigger: ATGTATACTGCCTTGGCCCCAGCGTACGAGGAAGCG...CAGGGTACTGCCTATCCCAGATAGGTCAGTGCACCAGGGACCCGGCCGCCAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354449.7
3UTR CAA 72 bp GTGCCACCTCCCGCAGTGGCTCTGGGCAGGAGCTGGTaGCTCATTTCCCCATTTGGTCTGTGTTGGGTCACC +
Preference number: 4 (lower is better)
Translates to: VPPPAVALGRSW*LISPFGLCWVT
Trigger: GGTGACCCAACACAGACCAAATGGGGAAATGAGCAACCAGCTCCTGCCCAGAGCCACTGCGGGAGGTGGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR TCA 90 bp AGCAGTCCTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCGGTCCATACATTCACTaGGGTTCACCATCCTTGGTC +
Preference number: 4 (lower is better)
Translates to: SSPALAMESSSAGGRGEVGPYIH*GSPSLV
Trigger: GACCAAGGATGGTGAACCTCAGTGAATGTATGGACC...GACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAGGACTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR TCA 90 bp AGCAGTCCTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCCATTGTCCACAAATGTaGTGTGTCTCACGCCCCAAC +
Preference number: 4 (lower is better)
Translates to: SSPALAMESSSAGGRGEVHCPQM*CVSRPN
Trigger: GTTGGGGCGTGAGACACATCACATTTGTGGACAATG...GACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAGGACTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR TCA 90 bp ATCTTGAATCCCGAGCAACGCCGAACACTGGCCACTCCTGGGCAGCAGAGGGGGGTTGGCAAAAAGCGATaGGCCCAGGAGGTCAGCAGA +
Preference number: 4 (lower is better)
Translates to: ILNPEQRRTLATPGQQRGVGKKR*AQEVSR
Trigger: TCTGCTGACCTCCTGGGCTCATCGCTTTTTGCCAAC...CCCCCTCTGCTGCCCAGGAGTGGCCAGTGTTCGGCGTTGCTCGGGATTCAAGAT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000354449.7
ENST00000354956.9
CDS-3UTR TCA 90 bp CCTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCAGCCCCGACATTATCAAACCGTaGAAGAAATCCCCGGATCTG +
Preference number: 4 (lower is better)
Translates to: PALAMESSSAGGRGEVSPDIIKP*KKSPDL
Trigger: CAGATCCGGGGATTTCTTTCACGGTTTGATAATGTC...GGGGCTGACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354449.7
ENST00000446450.6
CDS-3UTR GCA 90 bp CAGCAGTCCTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCAACAGACTGGAAACTaGTACTCCATCTGTGGGCTG +
Preference number: 4 (lower is better)
Translates to: QQSCSGDGELLSRRPGRSQQTGN*YSICGL
Trigger: CAGCCCACAGATGGAGTAGCAGTTTCCAGTCTGTTG...ACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAGGACTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR GCA 90 bp AGCAGTCCTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCCAGCTTTCTCTTGCTTaGAGCAATGACGGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: SSPALAMESSSAGGRGEVQLSLA*SNDGRK
Trigger: CTTCCTGCCGTCATTGCTGCAAGCAAGAGAAAGCTG...GACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAGGACTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR GCA 90 bp AGTCCTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCAGCCAGCTTTCTCTTGCTTaGAGCAATGACGGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: SPALAMESSSAGGRGEVSQLSLA*SNDGRK
Trigger: CTTCCTGCCGTCATTGCTGCAAGCAAGAGAAAGCTG...GCTGACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAGGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR GCA 90 bp GTCAGCAGTCCTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAATCCCCAGCTCCTTGCTaGTTTGGTTTCTTCAGACCA +
Preference number: 4 (lower is better)
Translates to: VSSPALAMESSSAGGRGESPAPC*FGFFRP
Trigger: TGGTCTGAAGAAACCAAAGCAGCAAGGAGCTGGGGA...TTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAGGACTGCTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR GCA 90 bp AGCAGTCCTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCTCCCCAGCTCCTTGCTaGTTTGGTTTCTTCAGACCA +
Preference number: 4 (lower is better)
Translates to: SSPALAMESSSAGGRGEVSPAPC*FGFFRP
Trigger: TGGTCTGAAGAAACCAAAGCAGCAAGGAGCTGGGGA...GACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAGGACTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR GCA 90 bp GCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCAGCCCCACAAAGTCCCCAGCTCCTTaGTGCTTTGGTTTCTTCAGA +
Preference number: 4 (lower is better)
Translates to: ALAMESSSAGGRGEVSPTKSPAP*CFGFFR
Trigger: TCTGAAGAAACCAAAGCAGCAAGGAGCTGGGGACTT...TGTGGGGCTGACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR GCA 90 bp TGCTGGCGGCCGGGTCCCTGGTGCACTGACCTATCTGGGATAGGCAGTACCCTGTGGGCAGGAGCTGGTTaGTCATTTCCCCATTTGGTC +
Preference number: 4 (lower is better)
Translates to: CWRPGPWCTDLSGIGSTLWAGAG*SFPHLV
Trigger: GACCAAATGGGGAAATGAGCAACCAGCTCCTGCCCA...CAGGGTACTGCCTATCCCAGATAGGTCAGTGCACCAGGGACCCGGCCGCCAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR GCA 90 bp GCTGCGGTGTGGGATGCTGGAGTTTGGCTGCAGGCTGACATCATTTATTTTTGCGGCGGACTCGGGCCCTaGACCTGTGCCGGCTGTGTC +
Preference number: 4 (lower is better)
Translates to: AAVWDAGVWLQADIIYFCGGLGP*TCAGCV
Trigger: GACACAGCCGGCACAGGTGCAGGGCCCGAGTCCGCC...GCAAAAATAAATGATGTCAGCCTGCAGCCAAACTCCAGCATCCCACACCGCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR CCA 90 bp TCCCCCTGGGGTGTGCTGTGTCCCACCTGGCCCACCAGAGGCTCACGACGATGGCCCATGCCTCCTTTCTaGTTCTTTTCCCATCCAACT +
Preference number: 4 (lower is better)
Translates to: SPWGVLCPTWPTRGSRRWPMPPF*FFSHPT
Trigger: AGTTGGATGGGAAAAGAACCAGAAAGGAGGCATGGG...CCATCGTCGTGAGCCTCTGGTGGGCCAGGTGGGACACAGCACACCCCAGGGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR CCA 90 bp GCCCCAACCCATCAACGTCCTAGCTACATTGCAACCCAAGGTGCCGGCTCCAAGCCGGGGAATATTTTCTaGAGCCGGTCCGCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: APTHQRPSYIATQGAGSKPGNIF*SRSAAA
Trigger: GGCAGCAGCGGACCGGCTCCAGAAAATATTCCCCGG...CTTGGAGCCGGCACCTTGGGTTGCAATGTAGCTAGGACGTTGATGGGTTGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000424071.5
CDS-3UTR CCA 90 bp CTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCAGCCCCACAGCGAGCTCCTTGCTGCTTTaGTTTCTTCAGACCATGTCT +
Preference number: 4 (lower is better)
Translates to: LAMESSSAGGRGEVSPTASSLLL*FLQTMS
Trigger: AGACATGGTCTGAAGAAACCAAAGCAGCAAGGAGCT...CGCTGTGGGGCTGACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR CCA 90 bp GGGGCCCAGAATCACCAGGCCTGGGGTCAGCAGTCCTGCTCTGGCGATGGAGAGGGCATAGCCCCCTTCTaGATGCTGCAAAACAGATAC +
Preference number: 4 (lower is better)
Translates to: GAQNHQAWGQQSCSGDGEGIAPF*MLQNRY
Trigger: GTATCTGTTTTGCAGCATCCAGAAGGGGGCTATGCC...CTCTCCATCGCCAGAGCAGGACTGCTGACCCCAGGCCTGGTGATTCTGGGCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR CCA 90 bp AGTCCTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCAGCGGCATAGCCCCCTTCTaGATGCTGCAAAACAGATAC +
Preference number: 4 (lower is better)
Translates to: SPALAMESSSAGGRGEVSGIAPF*MLQNRY
Trigger: GTATCTGTTTTGCAGCATCCAGAAGGGGGCTATGCC...GCTGACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAGGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR CCA 90 bp GTCAGCAGTCCTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAAAGCCCAAGAGAGGTTaGAGGCTCATTCATCCGATC +
Preference number: 4 (lower is better)
Translates to: VSSPALAMESSSAGGRGEKPKRG*RLIHPI
Trigger: GATCGGATGAATGAGCCTCCAACCTCTCTTGGGCTT...TTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAGGACTGCTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR CCA 90 bp GGGGCCCAGAATCACCAGGCCTGGGGTCAGCAGTCCTGCTCTGGCGATGGAGAGAAGCCCAAGAGAGGTTaGAGGCTCATTCATCCGATC +
Preference number: 4 (lower is better)
Translates to: GAQNHQAWGQQSCSGDGEKPKRG*RLIHPI
Trigger: GATCGGATGAATGAGCCTCCAACCTCTCTTGGGCTT...CTCTCCATCGCCAGAGCAGGACTGCTGACCCCAGGCCTGGTGATTCTGGGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR CCA 90 bp TGCTGGCGGCCGGGTCCCTGGTGCACTGACCTATCTGGGATAGGCAGTACCCTGCGGGGCCATCTCAGATaGTCTCATCATCGCTCATGT +
Preference number: 4 (lower is better)
Translates to: CWRPGPWCTDLSGIGSTLRGHLR*SHHRSC
Trigger: ACATGAGCGATGATGAGACCATCTGAGATGGCCCCG...CAGGGTACTGCCTATCCCAGATAGGTCAGTGCACCAGGGACCCGGCCGCCAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR CCA 90 bp TATCTTGAATCCCGAGCAACGCCGAACACTGGCCACTCCTGGGCAGCAGAGGGGTCAGCAGTCCTGCTCTaGCGATGGAGAGCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: YLESRATPNTGHSWAAEGSAVLL*RWRAPQ
Trigger: CTGAGGAGCTCTCCATCGCCAGAGCAGGACTGCTGA...CCCCTCTGCTGCCCAGGAGTGGCCAGTGTTCGGCGTTGCTCGGGATTCAAGATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354449.7
ENST00000354956.9
CDS-3UTR CCA 90 bp CCTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCAGCCCCTTAGCTCTGAACTGGTaGTATCTTGAATCCCGAGCA +
Preference number: 4 (lower is better)
Translates to: PALAMESSSAGGRGEVSPLALNW*YLESRA
Trigger: TGCTCGGGATTCAAGATACCACCAGTTCAGAGCTAA...GGGGCTGACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354449.7
ENST00000354956.9
CDS-3UTR CCA 90 bp GTCAGCAGTCCTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAAAGGATCCTGGGGGATaGCTATCAGTCACTGTGACA +
Preference number: 4 (lower is better)
Translates to: VSSPALAMESSSAGGRGEKDPGG*LSVTVT
Trigger: TGTCACAGTGACTGATAGCCATCCCCCAGGATCCTT...TTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAGGACTGCTGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR CCA 90 bp GCAGGCCCTCGCGATGAGCAGTGGGTCAGCTGCGGTGTGGGATGCTGGAGTTTGGCTCTGGGCAGGAGCTaGTTGCTCATTTCCCCATTT +
Preference number: 4 (lower is better)
Translates to: AGPRDEQWVSCGVGCWSLALGRS*LLISPF
Trigger: AAATGGGGAAATGAGCAACCAGCTCCTGCCCAGAGC...CAAACTCCAGCATCCCACACCGCAGCTGACCCACTGCTCATCGCGAGGGCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR CCA 90 bp GCTGCGGTGTGGGATGCTGGAGTTTGGCTGCAGGCTGACATCATTTATTTTTGCGACCCCTCCCTCGGCTaGGGCAGGAAGGCAGCCCAG +
Preference number: 4 (lower is better)
Translates to: AAVWDAGVWLQADIIYFCDPSLG*GRKAAQ
Trigger: CTGGGCTGCCTTCCTGCCCCAGCCGAGGGAGGGGTC...GCAAAAATAAATGATGTCAGCCTGCAGCCAAACTCCAGCATCCCACACCGCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR CCA 90 bp CAGCAGTCCTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTACAGCCACTGGAACTTaGACTGGCTACTTTGGGAGA +
Preference number: 4 (lower is better)
Translates to: QQSCSGDGELLSRRPGRSTATGT*TGYFGR
Trigger: TCTCCCAAAGTAGCCAGTCCAAGTTCCAGTGGCTGT...ACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAGGACTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR CCA 90 bp TATTTAGCTCTGAACTGGTGGTATCTTGAATCCCGAGCAACGCCGAACACTGGCCAGCGCCAGGCTGGGTaGGCGGACTCGGGCCCTGCA +
Preference number: 4 (lower is better)
Translates to: YLALNWWYLESRATPNTGQRQAG*ADSGPA
Trigger: TGCAGGGCCCGAGTCCGCCCACCCAGCCTGGCGCTG...GCCAGTGTTCGGCGTTGCTCGGGATTCAAGATACCACCAGTTCAGAGCTAAATA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR CCA 90 bp GGCAGAAAGCCATGTCTGAGCAGCTCACTCAGTCCTTGGTGGAAATCTGGCGTCTGGCGGCCGGGTCCCTaGTGCACTGACCTATCTGGG +
Preference number: 4 (lower is better)
Translates to: GRKPCLSSSLSPWWKSGVWRPGP*CTDLSG
Trigger: CCCAGATAGGTCAGTGCACCAGGGACCCGGCCGCCA...GACGCCAGATTTCCACCAAGGACTGAGTGAGCTGCTCAGACATGGCTTTCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR CCA 90 bp GCTCTGAACTGGTGGTATCTTGAATCCCGAGCAACGCCGAACACTGGCCACTCCCAGGTGACGTGGGCGTaGTCACCTCACCTGCAAGGC +
Preference number: 4 (lower is better)
Translates to: ALNWWYLESRATPNTGHSQVTWA*SPHLQG
Trigger: GCCTTGCAGGTGAGGTGACCACGCCCACGTCACCTG...GGAGTGGCCAGTGTTCGGCGTTGCTCGGGATTCAAGATACCACCAGTTCAGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR TCA 90 bp CTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCAGCCCCATCTTATCTGCAGTCTTaGAAGACTCGAGTGTGTTGG +
Preference number: 4 (lower is better)
Translates to: LLWRWRAPQQAAGEKSAPSYLQS*KTRVCW
Trigger: CCAACACACTCGAGTCTTTCAAGACTGCAGATAAGA...TGGGGCTGACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR TCA 90 bp AGCAGTCCTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCTTTAGTGAAAACCTTTaGTCCAAACCCACTGGCCCC +
Preference number: 4 (lower is better)
Translates to: SSPALAMESSSAGGRGEVFSENL*SKPTGP
Trigger: GGGGCCAGTGGGTTTGGATCAAAGGTTTTCACTAAA...GACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAGGACTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354449.7
ENST00000354956.9
CDS-3UTR TCA 90 bp TGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCAGCCCCACAGCGGGTTATCTTCGTCCTTTaGCCTTGGAAGAAATCACTG +
Preference number: 4 (lower is better)
Translates to: WRWRAPQQAAGEKSAPQRVIFVL*PWKKSL
Trigger: CAGTGATTTCTTCCAAGGTCAAAGGACGAAGATAAC...CCGCTGTGGGGCTGACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR TCA 90 bp ATCTTGAATCCCGAGCAACGCCGAACACTGGCCACTCCTGGGCAGCAGAGGGGGCATCATGGCTTTCGATaGGCTGCTCCAGTTGCTCCA +
Preference number: 4 (lower is better)
Translates to: ILNPEQRRTLATPGQQRGHHGFR*AAPVAP
Trigger: TGGAGCAACTGGAGCAGCTCATCGAAAGCCATGATG...CCCCCTCTGCTGCCCAGGAGTGGCCAGTGTTCGGCGTTGCTCGGGATTCAAGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354449.7
ENST00000354956.9
CDS-3UTR TCA 90 bp TATCTTGAATCCCGAGCAACGCCGAACACTGGCCACTCCTGGGCAGCAGAGGGGGTTGGCAAAAAGCGATaGGCCCAGGAGGTCAGCAGA +
Preference number: 4 (lower is better)
Translates to: YLESRATPNTGHSWAAEGVGKKR*AQEVSR
Trigger: TCTGCTGACCTCCTGGGCTCATCGCTTTTTGCCAAC...CCCCTCTGCTGCCCAGGAGTGGCCAGTGTTCGGCGTTGCTCGGGATTCAAGATA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000354449.7
ENST00000354956.9
CDS-3UTR TCA 90 bp CAGCAGTCCTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTGCAGCTTGGGTTTCTTaGTGCAGCAATGTAAGACCA +
Preference number: 4 (lower is better)
Translates to: QQSCSGDGELLSRRPGRSAAWVS*CSNVRP
Trigger: TGGTCTTACATTGCTGCATCAAGAAACCCAAGCTGC...ACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAGGACTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354449.7
ENST00000354956.9
CDS-3UTR TCA 90 bp CTTGCCCCGCACACATTTCACTCCCACTGTACTGGGCTTCCAAGCTTTGGCATTAGCACATTCCGGGGATaGGGGTGCCACCTCCCGCAG +
Preference number: 4 (lower is better)
Translates to: LAPHTFHSHCTGLPSFGISTFRG*GCHLPQ
Trigger: CTGCGGGAGGTGGCACCCTCATCCCCGGAATGTGCT...AATGCCAAAGCTTGGAAGCCCAGTACAGTGGGAGTGAAATGTGTGCGGGGCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR TCA 90 bp TGCTGGCGGCCGGGTCCCTGGTGCACTGACCTATCTGGGATAGGCAGTACCCTGAACCAAACATTTCACTaGGAAAGCCCCCTCCCTGCT +
Preference number: 4 (lower is better)
Translates to: CWRPGPWCTDLSGIGSTLNQTFH*ESPLPA
Trigger: AGCAGGGAGGGGGCTTTCTCAGTGAAATGTTTGGTT...CAGGGTACTGCCTATCCCAGATAGGTCAGTGCACCAGGGACCCGGCCGCCAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR TCA 90 bp GCTCTGAACTGGTGGTATCTTGAATCCCGAGCAACGCCGAACACTGGCCACTCCGGGTCCCTGGTGCACTaGCCTATCTGGGATAGGCAG +
Preference number: 4 (lower is better)
Translates to: ALNWWYLESRATPNTGHSGSLVH*PIWDRQ
Trigger: CTGCCTATCCCAGATAGGTCAGTGCACCAGGGACCC...GGAGTGGCCAGTGTTCGGCGTTGCTCGGGATTCAAGATACCACCAGTTCAGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR TCA 90 bp AGTCCTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCAGCGTGGCTGCAGGCCTTTaGAAAGTGGAGGAAAGAAAA +
Preference number: 4 (lower is better)
Translates to: SPALAMESSSAGGRGEVSVAAGL*KVEERK
Trigger: TTTTCTTTCCTCCACTTTTCAAAGGCCTGCAGCCAC...GCTGACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAGGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR TCA 90 bp AGGGGCCCAGAATCACCAGGCCTGGGGTCAGCAGTCCTGCTCTGGCGATGGAGAACTCTGCACACCGTATaGCCCCCGGTTTTACAGTTT +
Preference number: 4 (lower is better)
Translates to: RGPESPGLGSAVLLWRWRTLHTV*PPVLQF
Trigger: AAACTGTAAAACCGGGGGTCATACGGTGTGCAGAGT...TCTCCATCGCCAGAGCAGGACTGCTGACCCCAGGCCTGGTGATTCTGGGCCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR GCA 90 bp TGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCAGCCCCACAGCGGAAGGAGCTTCTTATCTaGAGTCTTGAAAGACTCGAG +
Preference number: 4 (lower is better)
Translates to: WRWRAPQQAAGEKSAPQRKELLI*SLERLE
Trigger: CTCGAGTCTTTCAAGACTGCAGATAAGAAGCTCCTT...CCGCTGTGGGGCTGACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR GCA 90 bp CCTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCAGCCCCGGTTTTCAAGAGCAGTaGCTGATTTTATGGATTCCC +
Preference number: 4 (lower is better)
Translates to: PALAMESSSAGGRGEVSPGFQEQ*LILWIP
Trigger: GGGAATCCATAAAATCAGGCACTGCTCTTGAAAACC...GGGGCTGACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR GCA 90 bp GCTCTGAACTGGTGGTATCTTGAATCCCGAGCAACGCCGAACACTGGCCACTCCACGTCTCTCGCCCCCTaGATGGTACGGTCACGGAAG +
Preference number: 4 (lower is better)
Translates to: ALNWWYLESRATPNTGHSTSLAP*MVRSRK
Trigger: CTTCCGTGACCGTACCATGCAGGGGGCGAGAGACGT...GGAGTGGCCAGTGTTCGGCGTTGCTCGGGATTCAAGATACCACCAGTTCAGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354449.7
ENST00000354956.9
CDS-3UTR GCA 90 bp GCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCAGCCCCACACTTTTCCCATCCAACTaGTTTAGGACAATCTGGGCT +
Preference number: 4 (lower is better)
Translates to: ALAMESSSAGGRGEVSPTLFPSN*FRTIWA
Trigger: AGCCCAGATTGTCCTAAAGCAGTTGGATGGGAAAAG...TGTGGGGCTGACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR GCA 90 bp GTCAGCAGTCCTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAACCATCCTTGGTCCCATaGCTCCTTTCTGGTTCTTTT +
Preference number: 4 (lower is better)
Translates to: VSSPALAMESSSAGGRGEPSLVP*LLSGSF
Trigger: AAAAGAACCAGAAAGGAGGCATGGGACCAAGGATGG...TTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAGGACTGCTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR GCA 90 bp AGCTACATTGCAACCCAAGGTGCCGGCTCCAAGCAGCAGACATTTGACAGACACGAGCCGGTCCGCTGCTaGCAGAGCCTTGGGCTTACC +
Preference number: 4 (lower is better)
Translates to: SYIATQGAGSKQQTFDRHEPVRC*QSLGLT
Trigger: GGTAAGCCCAAGGCTCTGGCAGCAGCGGACCGGCTC...GTGTCTGTCAAATGTCTGCTGCTTGGAGCCGGCACCTTGGGTTGCAATGTAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424071.5
CDS-3UTR GCA 90 bp TATCTTGAATCCCGAGCAACGCCGAACACTGGCCACTCCTGGGCAGCAGAGGGGACATCTCTGCGGGCTTaGTCCAGAGTGACACTGGAG +
Preference number: 4 (lower is better)
Translates to: YLESRATPNTGHSWAAEGTSLRA*SRVTLE
Trigger: CTCCAGTGTCACTCTGGAGCAAGCCCGCAGAGATGT...CCCCTCTGCTGCCCAGGAGTGGCCAGTGTTCGGCGTTGCTCGGGATTCAAGATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354449.7
ENST00000354956.9
CDS-3UTR GCA 90 bp TGCTGGCGGCCGGGTCCCTGGTGCACTGACCTATCTGGGATAGGCAGTACCCTGCAGCTTTCTCTTGCTTaGAGCAATGACGGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: CWRPGPWCTDLSGIGSTLQLSLA*SNDGRK
Trigger: CTTCCTGCCGTCATTGCTGCAAGCAAGAGAAAGCTG...CAGGGTACTGCCTATCCCAGATAGGTCAGTGCACCAGGGACCCGGCCGCCAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR GCA 90 bp CAGCAGTCCTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTAAGTCCCCAGCTCCTTaGTGCTTTGGTTTCTTCAGA +
Preference number: 4 (lower is better)
Translates to: QQSCSGDGELLSRRPGRSKSPAP*CFGFFR
Trigger: TCTGAAGAAACCAAAGCAGCAAGGAGCTGGGGACTT...ACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAGGACTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR GCA 90 bp CAGCAGTCCTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTTGTACATTTGTCAAATaGCAGGCTGACGGGAAGGAC +
Preference number: 4 (lower is better)
Translates to: QQSCSGDGELLSRRPGRSCTFVK*QADGKD
Trigger: GTCCTTCCCGTCAGCCTGGCATTTGACAAATGTACA...ACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAGGACTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354449.7
ENST00000446450.6
CDS-3UTR GCA 90 bp AGGGGCTCCGTGAAGTTCTTCCCAGAGCCGCGCTGCCTGCAGTGCGCTCTGACCTGTGGAGGTCACAGCTaGTCCTTTTTGGTCAATGAG +
Preference number: 4 (lower is better)
Translates to: RGSVKFFPEPRCLQCALTCGGHS*SFLVNE
Trigger: CTCATTGACCAAAAAGGAGCAGCTGTGACCTCCACA...GGTCAGAGCGCACTGCAGGCAGCGCGGCTCTGGGAAGAACTTCACGGAGCCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR CCA 90 bp TGGTATCTTGAATCCCGAGCAACGCCGAACACTGGCCACTCCTGGGCAGCAGAGTCGAAGATGATGCTGTaGGCAACGTCTCTCGCCCCC +
Preference number: 4 (lower is better)
Translates to: WYLESRATPNTGHSWAAESKMML*ATSLAP
Trigger: GGGGGCGAGAGACGTTGCCCACAGCATCATCTTCGA...CTCTGCTGCCCAGGAGTGGCCAGTGTTCGGCGTTGCTCGGGATTCAAGATACCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354449.7
ENST00000354956.9
CDS-3UTR CCA 90 bp AGTCCTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCAGCCCCATGCCTCCTTTCTaGTTCTTTTCCCATCCAACT +
Preference number: 4 (lower is better)
Translates to: SPALAMESSSAGGRGEVSPMPPF*FFSHPT
Trigger: AGTTGGATGGGAAAAGAACCAGAAAGGAGGCATGGG...GCTGACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAGGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR CCA 90 bp TGGTATCTTGAATCCCGAGCAACGCCGAACACTGGCCACTCCTGGGCAGCAGAGCCAAGGTCCGGTCTCTaGTTGAATCTCCTGGGGCCA +
Preference number: 4 (lower is better)
Translates to: WYLESRATPNTGHSWAAEPRSGL*LNLLGP
Trigger: TGGCCCCAGGAGATTCAACCAGAGACCGGACCTTGG...CTCTGCTGCCCAGGAGTGGCCAGTGTTCGGCGTTGCTCGGGATTCAAGATACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354449.7
ENST00000354956.9
CDS-3UTR CCA 90 bp CTTAAACCACATAGTGTACGTGTGCAGTTTCAGCGCCAGGCTGGGTGGGCGGACAGCAACGCCGAACACTaGCCACTCCTGGGCAGCAGA +
Preference number: 4 (lower is better)
Translates to: LKPHSVRVQFQRQAGWADSNAEH*PLLGSR
Trigger: TCTGCTGCCCAGGAGTGGCCAGTGTTCGGCGTTGCT...GTCCGCCCACCCAGCCTGGCGCTGAAACTGCACACGTACACTATGTGGTTTAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR CCA 90 bp TGGTATCTTGAATCCCGAGCAACGCCGAACACTGGCCACTCCTGGGCAGCAGAGATGCTATGCCCACAGTaGAGGACAGGCTGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: WYLESRATPNTGHSWAAEMLCPQ*RTGWEA
Trigger: TGCCTCCCAGCCTGTCCTCCACTGTGGGCATAGCAT...CTCTGCTGCCCAGGAGTGGCCAGTGTTCGGCGTTGCTCGGGATTCAAGATACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR CCA 90 bp GCTCTGAACTGGTGGTATCTTGAATCCCGAGCAACGCCGAACACTGGCCACTCCCAGGCTCGGCCTTTCTaGGCCTGGCCTGCTCATAAG +
Preference number: 4 (lower is better)
Translates to: ALNWWYLESRATPNTGHSQARPF*AWPAHK
Trigger: CTTATGAGCAGGCCAGGCCCAGAAAGGCCGAGCCTG...GGAGTGGCCAGTGTTCGGCGTTGCTCGGGATTCAAGATACCACCAGTTCAGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR TCA 90 bp TGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCAGCCCCACAGCGGTTCAAGAGCAGTGCCTaGTTTTATGGATTCCCATAT +
Preference number: 4 (lower is better)
Translates to: WRWRAPQQAAGEKSAPQRFKSSA*FYGFPY
Trigger: ATATGGGAATCCATAAAATCAGGCACTGCTCTTGAA...CCGCTGTGGGGCTGACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR TCA 90 bp AGCAGTCCTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCAGAGGAGGAACTTGTTaGGGAGTACAGGGTTTTCAA +
Preference number: 4 (lower is better)
Translates to: SSPALAMESSSAGGRGEVRGGTC*GVQGFQ
Trigger: TTGAAAACCCTGTACTCCTCAACAAGTTCCTCCTCT...GACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAGGACTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR TCA 90 bp GTCAGCAGTCCTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAAGAGGAGGAACTTGTTaGGGAGTACAGGGTTTTCAA +
Preference number: 4 (lower is better)
Translates to: VSSPALAMESSSAGGRGERGGTC*GVQGFQ
Trigger: TTGAAAACCCTGTACTCCTCAACAAGTTCCTCCTCT...TTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAGGACTGCTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR TCA 90 bp GCCCCAACCCATCAACGTCCTAGCTACATTGCAACCCAAGGTGCCGGCTCCAAGGGGCTTGCTCCAGAGTaGCACTGGAGAAGTTCACTG +
Preference number: 4 (lower is better)
Translates to: APTHQRPSYIATQGAGSKGLAPE*HWRSSL
Trigger: CAGTGAACTTCTCCAGTGTCACTCTGGAGCAAGCCC...CTTGGAGCCGGCACCTTGGGTTGCAATGTAGCTAGGACGTTGATGGGTTGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424071.5
CDS-3UTR TCA 90 bp AACCACCTCCCCCTGGAGCATAGCTGGTTCACCTTGACTGTGCCTTGGTTCCAGAATCCCCGGATCTGGTaGGGCACAAGCCCAAGAGAG +
Preference number: 4 (lower is better)
Translates to: NHLPLEHSWFTLTVPWFQNPRIW*GTSPRE
Trigger: CTCTCTTGGGCTTGTGCCTCACCAGATCCGGGGATT...CTGGAACCAAGGCACAGTCAAGGTGAACCAGCTATGCTCCAGGGGGAGGTGGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000414717.5
CDS-3UTR TCA 90 bp CCCCACAGGAGGAGCCTGCGGTGCGGTGGGCAGCACATTCCGGGGATGAGGGTGAGTTTGGCTGCAGGCTaGCATCATTTATTTTTGCAT +
Preference number: 4 (lower is better)
Translates to: PHRRSLRCGGQHIPGMRVSLAAG*HHLFLH
Trigger: ATGCAAAAATAAATGATGTCAGCCTGCAGCCAAACT...CACCCTCATCCCCGGAATGTGCTGCCCACCGCACCGCAGGCTCCTCCTGTGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR GCA 90 bp CTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCAGCCCCAAAGGAGCTTCTTATCTaGAGTCTTGAAAGACTCGAG +
Preference number: 4 (lower is better)
Translates to: LLWRWRAPQQAAGEKSAPKELLI*SLERLE
Trigger: CTCGAGTCTTTCAAGACTGCAGATAAGAAGCTCCTT...TGGGGCTGACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR GCA 90 bp GCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCAGCCCCACAAAGGAGCTTCTTATCTaGAGTCTTGAAAGACTCGAG +
Preference number: 4 (lower is better)
Translates to: ALAMESSSAGGRGEVSPTKELLI*SLERLE
Trigger: CTCGAGTCTTTCAAGACTGCAGATAAGAAGCTCCTT...TGTGGGGCTGACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR GCA 90 bp AGGGGCCCAGAATCACCAGGCCTGGGGTCAGCAGTCCTGCTCTGGCGATGGAGAAAGTCCCCAGCTCCTTaGTGCTTTGGTTTCTTCAGA +
Preference number: 4 (lower is better)
Translates to: RGPESPGLGSAVLLWRWRKSPAP*CFGFFR
Trigger: TCTGAAGAAACCAAAGCAGCAAGGAGCTGGGGACTT...TCTCCATCGCCAGAGCAGGACTGCTGACCCCAGGCCTGGTGATTCTGGGCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR GCA 90 bp GCTCTGAACTGGTGGTATCTTGAATCCCGAGCAACGCCGAACACTGGCCACTCCTCCGATCGTCACTGCTaGTGGCAATGGCATAGCCCC +
Preference number: 4 (lower is better)
Translates to: ALNWWYLESRATPNTGHSSDRHC*WQWHSP
Trigger: GGGGCTATGCCATTGCCAGCAGCAGTGACGATCGGA...GGAGTGGCCAGTGTTCGGCGTTGCTCGGGATTCAAGATACCACCAGTTCAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354449.7
ENST00000354956.9
CDS-3UTR GCA 90 bp GCTGCGGTGTGGGATGCTGGAGTTTGGCTGCAGGCTGACATCATTTATTTTTGCTTCCCAGAGCCGCGCTaGCTGCAGTGCGCTCTGACC +
Preference number: 4 (lower is better)
Translates to: AAVWDAGVWLQADIIYFCFPEPR*LQCALT
Trigger: GGTCAGAGCGCACTGCAGGCAGCGCGGCTCTGGGAA...GCAAAAATAAATGATGTCAGCCTGCAGCCAAACTCCAGCATCCCACACCGCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR CCA 90 bp CAGCAGTCCTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTTCGTTCAGCTTCTTCTaGGTCAACTCATGCCAAAAC +
Preference number: 4 (lower is better)
Translates to: QQSCSGDGELLSRRPGRSSFSFF*VNSCQN
Trigger: GTTTTGGCATGAGTTGACCCAGAAGAAGCTGAACGA...ACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAGGACTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR CCA 90 bp CTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCAGCCCCATGCTTTAGGACAATCTaGGCTAAATGCCATTTCTGG +
Preference number: 4 (lower is better)
Translates to: LLWRWRAPQQAAGEKSAPCFRTI*AKCHFW
Trigger: CCAGAAATGGCATTTAGCCCAGATTGTCCTAAAGCA...TGGGGCTGACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR CCA 90 bp TGGTATCTTGAATCCCGAGCAACGCCGAACACTGGCCACTCCTGGGCAGCAGAGGCCACCGGCTCTCCCTaGTGTCCATCAATAGGAAGA +
Preference number: 4 (lower is better)
Translates to: WYLESRATPNTGHSWAAEATGSP*CPSIGR
Trigger: TCTTCCTATTGATGGACACCAGGGAGAGCCGGTGGC...CTCTGCTGCCCAGGAGTGGCCAGTGTTCGGCGTTGCTCGGGATTCAAGATACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354449.7
ENST00000354956.9
CDS-3UTR CCA 90 bp AGTCCTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCAGCAGCTCCTTGCTGCTTTaGTTTCTTCAGACCATGTCT +
Preference number: 4 (lower is better)
Translates to: SPALAMESSSAGGRGEVSSSLLL*FLQTMS
Trigger: AGACATGGTCTGAAGAAACCAAAGCAGCAAGGAGCT...GCTGACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAGGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
3UTR CAA 72 bp TTCAACCACCTCCCCCTGGAGCATAGCTGGTTCACCTaGACTGTGCCTTGGTTCCAGGCCCAAGTAGCCCCT +
Preference number: 4 (lower is better)
Translates to: FNHLPLEHSWFT*TVPWFQAQVAP
Trigger: AGGGGCTACTTGGGCCTGGAACCAAGGCACAGTCAAGGTGAACCAGCTATGCTCCAGGGGGAGGTGGTTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000414717.5
CDS-3UTR TCA 90 bp AGCCTGCGGTGCGGTGGGCAGCACATTCCGGGGATGAGGGTGCCACCTCCCGCAGTGACTCCTTCTGTTTaGCAAAGATTATCATATGCA +
Preference number: 4 (lower is better)
Translates to: SLRCGGQHIPGMRVPPPAVTPSV*QRLSYA
Trigger: TGCATATGATAATCTTTGTCAAACAGAAGGAGTCAC...TGCGGGAGGTGGCACCCTCATCCCCGGAATGTGCTGCCCACCGCACCGCAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR TCA 90 bp TCCCCCTGGGGTGTGCTGTGTCCCACCTGGCCCACCAGAGGCTCACGACGATGGTCCAACACATCAGTTTaGGATTTAGATCCACTGATG +
Preference number: 4 (lower is better)
Translates to: SPWGVLCPTWPTRGSRRWSNTSV*DLDPLM
Trigger: CATCAGTGGATCTAAATCTCAAACTGATGTGTTGGA...CCATCGTCGTGAGCCTCTGGTGGGCCAGGTGGGACACAGCACACCCCAGGGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR TCA 90 bp GCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCAGCCCCACATCCAACACATCAGTTTaGGATTTAGATCCACTGATG +
Preference number: 4 (lower is better)
Translates to: ALAMESSSAGGRGEVSPTSNTSV*DLDPLM
Trigger: CATCAGTGGATCTAAATCTCAAACTGATGTGTTGGA...TGTGGGGCTGACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR TCA 90 bp TGCTGGCGGCCGGGTCCCTGGTGCACTGACCTATCTGGGATAGGCAGTACCCTGGACATTATCAAACCGTaGAAGAAATCCCCGGATCTG +
Preference number: 4 (lower is better)
Translates to: CWRPGPWCTDLSGIGSTLDIIKP*KKSPDL
Trigger: CAGATCCGGGGATTTCTTTCACGGTTTGATAATGTC...CAGGGTACTGCCTATCCCAGATAGGTCAGTGCACCAGGGACCCGGCCGCCAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR TCA 90 bp CTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCAGCCCCAGGCTATCAGTCACTGTaGCAAGAAATAAAAACTGCA +
Preference number: 4 (lower is better)
Translates to: LLWRWRAPQQAAGEKSAPGYQSL*QEIKTA
Trigger: TGCAGTTTTTATTTCTTGTCACAGTGACTGATAGCC...TGGGGCTGACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR TCA 90 bp CTGTACTGGGCTTCCAAGCTTTGGCATTCAGGCCCCTATATTTTCTGTAGGAAAGGCAGGCCCTCGCGATaGGCAGTGGGTCAGCTGCGG +
Preference number: 4 (lower is better)
Translates to: LYWASKLWHSGPYIFCRKGRPSR*AVGQLR
Trigger: CCGCAGCTGACCCACTGCTCATCGCGAGGGCCTGCC...TTTCCTACAGAAAATATAGGGGCCTGAATGCCAAAGCTTGGAAGCCCAGTACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR GCA 90 bp TATCTTGAATCCCGAGCAACGCCGAACACTGGCCACTCCTGGGCAGCAGAGGGGCAACAGACTGGAAACTaGTACTCCATCTGTGGGCTG +
Preference number: 4 (lower is better)
Translates to: YLESRATPNTGHSWAAEGQQTGN*YSICGL
Trigger: CAGCCCACAGATGGAGTAGCAGTTTCCAGTCTGTTG...CCCCTCTGCTGCCCAGGAGTGGCCAGTGTTCGGCGTTGCTCGGGATTCAAGATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354449.7
ENST00000354956.9
CDS-3UTR GCA 90 bp AGTCCTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCAGCACAATCTGGGCTAAATaGCATTTCTGGAAGCTTCAC +
Preference number: 4 (lower is better)
Translates to: SPALAMESSSAGGRGEVSTIWAK*HFWKLH
Trigger: GTGAAGCTTCCAGAAATGGCATTTAGCCCAGATTGT...GCTGACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAGGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR GCA 90 bp CAGCAGTCCTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTACAATCTGGGCTAAATaGCATTTCTGGAAGCTTCAC +
Preference number: 4 (lower is better)
Translates to: QQSCSGDGELLSRRPGRSTIWAK*HFWKLH
Trigger: GTGAAGCTTCCAGAAATGGCATTTAGCCCAGATTGT...ACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAGGACTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR GCA 90 bp CCCATCAACGTCCTAGCTACATTGCAACCCAAGGTGCCGGCTCCAAGCAGCAGAATGAGCTGCTCCAGTTaGTCCACATCTCTGCGGGCT +
Preference number: 4 (lower is better)
Translates to: PINVLATLQPKVPAPSSRMSCSS*STSLRA
Trigger: AGCCCGCAGAGATGTGGAGCAACTGGAGCAGCTCAT...TCTGCTGCTTGGAGCCGGCACCTTGGGTTGCAATGTAGCTAGGACGTTGATGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424071.5
CDS-3UTR GCA 90 bp GGCAGAAAGCCATGTCTGAGCAGCTCACTCAGTCCTTGGTGGAAATCTGGCGTCTCCGATCGTCACTGCTaGTGGCAATGGCATAGCCCC +
Preference number: 4 (lower is better)
Translates to: GRKPCLSSSLSPWWKSGVSDRHC*WQWHSP
Trigger: GGGGCTATGCCATTGCCAGCAGCAGTGACGATCGGA...GACGCCAGATTTCCACCAAGGACTGAGTGAGCTGCTCAGACATGGCTTTCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR CCA 90 bp AGCAGTCCTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCACAACTTCAACAGACTaGAAACTGCTACTCCATCTG +
Preference number: 4 (lower is better)
Translates to: SSPALAMESSSAGGRGEVTTSTD*KLLLHL
Trigger: CAGATGGAGTAGCAGTTTCCAGTCTGTTGAAGTTGT...GACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAGGACTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR CCA 90 bp GTCAGCAGTCCTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAACAACTTCAACAGACTaGAAACTGCTACTCCATCTG +
Preference number: 4 (lower is better)
Translates to: VSSPALAMESSSAGGRGETTSTD*KLLLHL
Trigger: CAGATGGAGTAGCAGTTTCCAGTCTGTTGAAGTTGT...TTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAGGACTGCTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR CCA 90 bp GGGGCCCAGAATCACCAGGCCTGGGGTCAGCAGTCCTGCTCTGGCGATGGAGAGTGCTTTAGGACAATCTaGGCTAAATGCCATTTCTGG +
Preference number: 4 (lower is better)
Translates to: GAQNHQAWGQQSCSGDGECFRTI*AKCHFW
Trigger: CCAGAAATGGCATTTAGCCCAGATTGTCCTAAAGCA...CTCTCCATCGCCAGAGCAGGACTGCTGACCCCAGGCCTGGTGATTCTGGGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR CCA 90 bp AAGGTGCCGGCTCCAAGCAGCAGACATTTGACAGACACAACCTTGTCCAAGTCTCTGCTGCCAGAGCCTTaGGCTTACCACCCCCTAGGC +
Preference number: 4 (lower is better)
Translates to: KVPAPSSRHLTDTTLSKSLLPEP*AYHPLG
Trigger: GCCTAGGGGGTGGTAAGCCCAAGGCTCTGGCAGCAG...AGACTTGGACAAGGTTGTGTCTGTCAAATGTCTGCTGCTTGGAGCCGGCACCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424071.5
CDS-3UTR CCA 90 bp CTTGCCCCGCACACATTTCACTCCCACTGTACTGGGCTTCCAAGCTTTGGCATTCCGGGGAATATTTTCTaGAGCCGGTCCGCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: LAPHTFHSHCTGLPSFGIPGNIF*SRSAAA
Trigger: GGCAGCAGCGGACCGGCTCCAGAAAATATTCCCCGG...AATGCCAAAGCTTGGAAGCCCAGTACAGTGGGAGTGAAATGTGTGCGGGGCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR CCA 90 bp GGCAGAAAGCCATGTCTGAGCAGCTCACTCAGTCCTTGGTGGAAATCTGGCGTCTCAGCAGTCCTGCTCTaGCGATGGAGAGCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: GRKPCLSSSLSPWWKSGVSAVLL*RWRAPQ
Trigger: CTGAGGAGCTCTCCATCGCCAGAGCAGGACTGCTGA...GACGCCAGATTTCCACCAAGGACTGAGTGAGCTGCTCAGACATGGCTTTCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR CCA 90 bp TATCTTGAATCCCGAGCAACGCCGAACACTGGCCACTCCTGGGCAGCAGAGGGGAGCTCACTCAGTCCTTaGTGGAAATCTGGCGTCACT +
Preference number: 4 (lower is better)
Translates to: YLESRATPNTGHSWAAEGSSLSP*WKSGVT
Trigger: AGTGACGCCAGATTTCCACCAAGGACTGAGTGAGCT...CCCCTCTGCTGCCCAGGAGTGGCCAGTGTTCGGCGTTGCTCGGGATTCAAGATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR CCA 90 bp TATCTTGAATCCCGAGCAACGCCGAACACTGGCCACTCCTGGGCAGCAGAGGGGTGGGATGCTGGAGTTTaGCTGCAGGCTGACATCATT +
Preference number: 4 (lower is better)
Translates to: YLESRATPNTGHSWAAEGWDAGV*LQADII
Trigger: AATGATGTCAGCCTGCAGCCAAACTCCAGCATCCCA...CCCCTCTGCTGCCCAGGAGTGGCCAGTGTTCGGCGTTGCTCGGGATTCAAGATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR CCA 90 bp AACCACCTCCCCCTGGAGCATAGCTGGTTCACCTTGACTGTGCCTTGGTTCCAGCCCCTGGAGCATAGCTaGTTCACCTTGACTGTGCCT +
Preference number: 4 (lower is better)
Translates to: NHLPLEHSWFTLTVPWFQPLEHS*FTLTVP
Trigger: AGGCACAGTCAAGGTGAACCAGCTATGCTCCAGGGG...CTGGAACCAAGGCACAGTCAAGGTGAACCAGCTATGCTCCAGGGGGAGGTGGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000414717.5
3UTR CAA 72 bp AGGCAGAAAGCCATGTCTGAGCAGCTCACTCAGTCCTaGGTGGAAATCTGGCGTCACTGGGTCATGTGGGCC +
Preference number: 4 (lower is better)
Translates to: RQKAMSEQLTQS*VEIWRHWVMWA
Trigger: GGCCCACATGACCCAGTGACGCCAGATTTCCACCAAGGACTGAGTGAGCTGCTCAGACATGGCTTTCTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354449.7
3UTR CAA 72 bp TGTCTCACGCCCCAACCCATCAACGTCCTAGCTACATaGCAACCCAAGGTGCCGGCTCCAAGCAGCAGACAT +
Preference number: 4 (lower is better)
Translates to: CLTPQPINVLAT*QPKVPAPSSRH
Trigger: ATGTCTGCTGCTTGGAGCCGGCACCTTGGGTTGCAATGTAGCTAGGACGTTGATGGGTTGGGGCGTGAGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424071.5
CDS-3UTR TCA 90 bp AGGGGCCCAGAATCACCAGGCCTGGGGTCAGCAGTCCTGCTCTGGCGATGGAGATCATGTCAAAAGCACTaGACTCCAATGTTAAGCGAG +
Preference number: 4 (lower is better)
Translates to: RGPESPGLGSAVLLWRWRSCQKH*TPMLSE
Trigger: CTCGCTTAACATTGGAGTTCAGTGCTTTTGACATGA...TCTCCATCGCCAGAGCAGGACTGCTGACCCCAGGCCTGGTGATTCTGGGCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR TCA 90 bp AGGGGCCCAGAATCACCAGGCCTGGGGTCAGCAGTCCTGCTCTGGCGATGGAGAGTTATCTTCGTCCTTTaGCCTTGGAAGAAATCACTG +
Preference number: 4 (lower is better)
Translates to: RGPESPGLGSAVLLWRWRVIFVL*PWKKSL
Trigger: CAGTGATTTCTTCCAAGGTCAAAGGACGAAGATAAC...TCTCCATCGCCAGAGCAGGACTGCTGACCCCAGGCCTGGTGATTCTGGGCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR TCA 90 bp GGGGCCCAGAATCACCAGGCCTGGGGTCAGCAGTCCTGCTCTGGCGATGGAGAGTCCAACACATCAGTTTaGGATTTAGATCCACTGATG +
Preference number: 4 (lower is better)
Translates to: GAQNHQAWGQQSCSGDGESNTSV*DLDPLM
Trigger: CATCAGTGGATCTAAATCTCAAACTGATGTGTTGGA...CTCTCCATCGCCAGAGCAGGACTGCTGACCCCAGGCCTGGTGATTCTGGGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR TCA 90 bp CTCTGGCATTCACACCGGGGAATATTTTCTGGAGCCGGTCCGCTGCTGCCAGAGCATTGTCCACAAATGTaGTGTGTCTCACGCCCCAAC +
Preference number: 4 (lower is better)
Translates to: LWHSHRGIFSGAGPLLPEHCPQM*CVSRPN
Trigger: GTTGGGGCGTGAGACACATCACATTTGTGGACAATG...CTCTGGCAGCAGCGGACCGGCTCCAGAAAATATTCCCCGGTGTGAATGCCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000424071.5
CDS-3UTR TCA 90 bp TACATTGCAACCCAAGGTGCCGGCTCCAAGCAGCAGACATTTGACAGACACAACTCTTGCTTGCAGCAATaGCGGCAGGAAGCCACCGGC +
Preference number: 4 (lower is better)
Translates to: YIATQGAGSKQQTFDRHNSCLQQ*RQEATG
Trigger: GCCGGTGGCTTCCTGCCGTCATTGCTGCAAGCAAGA...GTTGTGTCTGTCAAATGTCTGCTGCTTGGAGCCGGCACCTTGGGTTGCAATGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424071.5
CDS-3UTR TCA 90 bp AGTCCTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCAGCTCAGACCATGTCTCATaGCAACAAATGTGTCAAATC +
Preference number: 4 (lower is better)
Translates to: SPALAMESSSAGGRGEVSSDHVS*QQMCQI
Trigger: GATTTGACACATTTGTTGTCATGAGACATGGTCTGA...GCTGACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAGGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR TCA 90 bp CTTAAACCACATAGTGTACGTGTGCAGTTTCAGCGCCAGGCTGGGTGGGCGGACGAACTGGTGGTATCTTaGATCCCGAGCAACGCCGAA +
Preference number: 4 (lower is better)
Translates to: LKPHSVRVQFQRQAGWADELVVS*IPSNAE
Trigger: TTCGGCGTTGCTCGGGATTCAAGATACCACCAGTTC...GTCCGCCCACCCAGCCTGGCGCTGAAACTGCACACGTACACTATGTGGTTTAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR TCA 90 bp GCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCAGCCCCACACCTTCTCGTTCATATTaGTCAAGAACTTTGGAAGAA +
Preference number: 4 (lower is better)
Translates to: ALAMESSSAGGRGEVSPTPSRSY*SRTLEE
Trigger: TTCTTCCAAAGTTCTTGATCAATATGAACGAGAAGG...TGTGGGGCTGACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR TCA 90 bp CTGGTTCACCTTGACTGTGCCTTGGTTCCAGGCCCAAGTAGCCCCTTGACTGGAATAGCTGGTTCACCTTaGCTGTGCCTTGGTTCCAGG +
Preference number: 4 (lower is better)
Translates to: LVHLDCALVPGPSSPLTGIAGSP*LCLGSR
Trigger: CCTGGAACCAAGGCACAGTCAAGGTGAACCAGCTAT...TCCAGTCAAGGGGCTACTTGGGCCTGGAACCAAGGCACAGTCAAGGTGAACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414717.5
CDS-3UTR GCA 90 bp GCTCTGAACTGGTGGTATCTTGAATCCCGAGCAACGCCGAACACTGGCCACTCCTCATCCGATCGTCACTaGTGCTGGCAATGGCATAGC +
Preference number: 4 (lower is better)
Translates to: ALNWWYLESRATPNTGHSSSDRH*CWQWHS
Trigger: GCTATGCCATTGCCAGCAGCAGTGACGATCGGATGA...GGAGTGGCCAGTGTTCGGCGTTGCTCGGGATTCAAGATACCACCAGTTCAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354449.7
ENST00000354956.9
CDS-3UTR GCA 90 bp CTGTACTGGGCTTCCAAGCTTTGGCATTCAGGCCCCTATATTTTCTGTAGGAAACCTCCCCCTGGGGTGTaGTGTGTCCCACCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: LYWASKLWHSGPYIFCRKPPPGV*CVPPGP
Trigger: TGGGCCAGGTGGGACACAGCACACCCCAGGGGGAGG...TTTCCTACAGAAAATATAGGGGCCTGAATGCCAAAGCTTGGAAGCCCAGTACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR CCA 90 bp ATCTTGAATCCCGAGCAACGCCGAACACTGGCCACTCCTGGGCAGCAGAGGGGGTCGTTCAGCTTCTTCTaGGTCAACTCATGCCAAAAC +
Preference number: 4 (lower is better)
Translates to: ILNPEQRRTLATPGQQRGSFSFF*VNSCQN
Trigger: GTTTTGGCATGAGTTGACCCAGAAGAAGCTGAACGA...CCCCCTCTGCTGCCCAGGAGTGGCCAGTGTTCGGCGTTGCTCGGGATTCAAGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354449.7
ENST00000354956.9
CDS-3UTR CCA 90 bp AGCAGTCCTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCAAGACTCGAGTGTGTTaGTGTTATACAGTGTTCCAA +
Preference number: 4 (lower is better)
Translates to: SSPALAMESSSAGGRGEVKTRVC*CYTVFQ
Trigger: TTGGAACACTGTATAACACCAACACACTCGAGTCTT...GACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAGGACTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR CCA 90 bp CAGCAGTCCTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTGCTAAATGCCATTTCTaGAAGCTTCACTTCGAAGAT +
Preference number: 4 (lower is better)
Translates to: QQSCSGDGELLSRRPGRSAKCHF*KLHFED
Trigger: ATCTTCGAAGTGAAGCTTCCAGAAATGGCATTTAGC...ACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAGGACTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR CCA 90 bp AGGGGCCCAGAATCACCAGGCCTGGGGTCAGCAGTCCTGCTCTGGCGATGGAGATGCTTTAGGACAATCTaGGCTAAATGCCATTTCTGG +
Preference number: 4 (lower is better)
Translates to: RGPESPGLGSAVLLWRWRCFRTI*AKCHFW
Trigger: CCAGAAATGGCATTTAGCCCAGATTGTCCTAAAGCA...TCTCCATCGCCAGAGCAGGACTGCTGACCCCAGGCCTGGTGATTCTGGGCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR CCA 90 bp ATGACGGCAGGAAGCCACCGGCTCTCCCTGGTGTCCATCAATAGGAAGACGACAGAGGTTCACCATCCTTaGTCCCATGCCTCCTTTCTG +
Preference number: 4 (lower is better)
Translates to: MTAGSHRLSLVSINRKTTEVHHP*SHASFL
Trigger: CAGAAAGGAGGCATGGGACCAAGGATGGTGAACCTC...TGTCGTCTTCCTATTGATGGACACCAGGGAGAGCCGGTGGCTTCCTGCCGTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424071.5
CDS-3UTR CCA 90 bp TCCAGTTGCTCCACATCTCTGCGGGCTTGCTCCAGAGTGACACTGGAGAAGTTCGCCACCGGCTCTCCCTaGTGTCCATCAATAGGAAGA +
Preference number: 4 (lower is better)
Translates to: SSCSTSLRACSRVTLEKFATGSP*CPSIGR
Trigger: TCTTCCTATTGATGGACACCAGGGAGAGCCGGTGGC...GAACTTCTCCAGTGTCACTCTGGAGCAAGCCCGCAGAGATGTGGAGCAACTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424071.5
CDS-3UTR CCA 90 bp TATTTAGCTCTGAACTGGTGGTATCTTGAATCCCGAGCAACGCCGAACACTGGCGTCCTGCTCTGGCGATaGAGAGCTCCTCAGCAGGCG +
Preference number: 4 (lower is better)
Translates to: YLALNWWYLESRATPNTGVLLWR*RAPQQA
Trigger: CGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAGGAC...GCCAGTGTTCGGCGTTGCTCGGGATTCAAGATACCACCAGTTCAGAGCTAAATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354449.7
ENST00000354956.9
CDS-3UTR CCA 90 bp AGCAGTCCTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCTATTTAGCTCTGAACTaGTGGTATCTTGAATCCCGA +
Preference number: 4 (lower is better)
Translates to: SSPALAMESSSAGGRGEVYLALN*WYLESR
Trigger: TCGGGATTCAAGATACCACCAGTTCAGAGCTAAATA...GACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAGGACTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354449.7
ENST00000354956.9
CDS-3UTR CCA 90 bp TATCTTGAATCCCGAGCAACGCCGAACACTGGCCACTCCTGGGCAGCAGAGGGGTTTGGAAATTGGCACTaGGTGAAAAGGTCGGAGGAC +
Preference number: 4 (lower is better)
Translates to: YLESRATPNTGHSWAAEGFGNWH*VKRSED
Trigger: GTCCTCCGACCTTTTCACCCAGTGCCAATTTCCAAA...CCCCTCTGCTGCCCAGGAGTGGCCAGTGTTCGGCGTTGCTCGGGATTCAAGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR CCA 90 bp CAAGGCCAAGGTTATTATTTAGCTCTGAACTGGTGGTATCTTGAATCCCGAGCACGGGAGGCCAGCTCCTaGCAGGCCCTCGCGATGAGC +
Preference number: 4 (lower is better)
Translates to: QGQGYYLALNWWYLESRAREASS*QALAMS
Trigger: GCTCATCGCGAGGGCCTGCCAGGAGCTGGCCTCCCG...TGCTCGGGATTCAAGATACCACCAGTTCAGAGCTAAATAATAACCTTGGCCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354449.7
3UTR CAA 72 bp GATGAGCTGCTCCAGTTGCTCCACATCTCTGCGGGCTaGCTCCAGAGTGACACTGGAGAAGTTCACTGGATG +
Preference number: 4 (lower is better)
Translates to: DELLQLLHISAG*LQSDTGEVHWM
Trigger: CATCCAGTGAACTTCTCCAGTGTCACTCTGGAGCAAGCCCGCAGAGATGTGGAGCAACTGGAGCAGCTCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424071.5
CDS-3UTR TCA 90 bp GGGGCCCAGAATCACCAGGCCTGGGGTCAGCAGTCCTGCTCTGGCGATGGAGAGGTGACTCCTTCTGTTTaGCAAAGATTATCATATGCA +
Preference number: 4 (lower is better)
Translates to: GAQNHQAWGQQSCSGDGEVTPSV*QRLSYA
Trigger: TGCATATGATAATCTTTGTCAAACAGAAGGAGTCAC...CTCTCCATCGCCAGAGCAGGACTGCTGACCCCAGGCCTGGTGATTCTGGGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR TCA 90 bp GCTCTGAACTGGTGGTATCTTGAATCCCGAGCAACGCCGAACACTGGCCACTCCCATTGTCCACAAATGTaGTGTGTCTCACGCCCCAAC +
Preference number: 4 (lower is better)
Translates to: ALNWWYLESRATPNTGHSHCPQM*CVSRPN
Trigger: GTTGGGGCGTGAGACACATCACATTTGTGGACAATG...GGAGTGGCCAGTGTTCGGCGTTGCTCGGGATTCAAGATACCACCAGTTCAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354449.7
ENST00000354956.9
CDS-3UTR TCA 90 bp ACGACATCATGGCTTTCGATGAGCTGCTCCAGTTGCTCCACATCTCTGCGGGCTCATCATGGCTTTCGATaGGCTGCTCCAGTTGCTCCA +
Preference number: 4 (lower is better)
Translates to: TTSWLSMSCSSCSTSLRAHHGFR*AAPVAP
Trigger: TGGAGCAACTGGAGCAGCTCATCGAAAGCCATGATG...AGCCCGCAGAGATGTGGAGCAACTGGAGCAGCTCATCGAAAGCCATGATGTCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424071.5
CDS-3UTR TCA 90 bp AGGGGCCCAGAATCACCAGGCCTGGGGTCAGCAGTCCTGCTCTGGCGATGGAGATCAGACCATGTCTCATaGCAACAAATGTGTCAAATC +
Preference number: 4 (lower is better)
Translates to: RGPESPGLGSAVLLWRWRSDHVS*QQMCQI
Trigger: GATTTGACACATTTGTTGTCATGAGACATGGTCTGA...TCTCCATCGCCAGAGCAGGACTGCTGACCCCAGGCCTGGTGATTCTGGGCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR TCA 90 bp TGGTATCTTGAATCCCGAGCAACGCCGAACACTGGCCACTCCTGGGCAGCAGAGGCAGCTTGGGTTTCTTaGTGCAGCAATGTAAGACCA +
Preference number: 4 (lower is better)
Translates to: WYLESRATPNTGHSWAAEAAWVS*CSNVRP
Trigger: TGGTCTTACATTGCTGCATCAAGAAACCCAAGCTGC...CTCTGCTGCCCAGGAGTGGCCAGTGTTCGGCGTTGCTCGGGATTCAAGATACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354449.7
ENST00000354956.9
CDS-3UTR TCA 90 bp CAAGGTTATTATTTAGCTCTGAACTGGTGGTATCTTGAATCCCGAGCAACGCCGCACGACGATGGCACCTaGCCAGGTGACGTGGGCGTG +
Preference number: 4 (lower is better)
Translates to: QGYYLALNWWYLESRATPHDDGT*PGDVGV
Trigger: CACGCCCACGTCACCTGGTCAGGTGCCATCGTCGTG...CGGCGTTGCTCGGGATTCAAGATACCACCAGTTCAGAGCTAAATAATAACCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR CCA 90 bp GTGATATGGTGTTTTATACGCTTCCTCGTACGCTGGGGCCAAGGCAGTATACATCTGCTGCCAGAGCCTTaGGCTTACCACCCCCTAGGC +
Preference number: 4 (lower is better)
Translates to: VIWCFIRFLVRWGQGSIHLLPEP*AYHPLG
Trigger: GCCTAGGGGGTGGTAAGCCCAAGGCTCTGGCAGCAG...ATGTATACTGCCTTGGCCCCAGCGTACGAGGAAGCGTATAAAACACCATATCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR CCA 90 bp GCTCTGAACTGGTGGTATCTTGAATCCCGAGCAACGCCGAACACTGGCCACTCCAAGCCCAAGAGAGGTTaGAGGCTCATTCATCCGATC +
Preference number: 4 (lower is better)
Translates to: ALNWWYLESRATPNTGHSKPKRG*RLIHPI
Trigger: GATCGGATGAATGAGCCTCCAACCTCTCTTGGGCTT...GGAGTGGCCAGTGTTCGGCGTTGCTCGGGATTCAAGATACCACCAGTTCAGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354449.7
ENST00000354956.9
CDS-3UTR CCA 90 bp CTGTACTGGGCTTCCAAGCTTTGGCATTCAGGCCCCTATATTTTCTGTAGGAAAGGCCATGGCCTCTCCTaGGTTGGGGCCTCACAGCTG +
Preference number: 4 (lower is better)
Translates to: LYWASKLWHSGPYIFCRKGHGLS*VGASQL
Trigger: CAGCTGTGAGGCCCCAACCCAGGAGAGGCCATGGCC...TTTCCTACAGAAAATATAGGGGCCTGAATGCCAAAGCTTGGAAGCCCAGTACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR CCA 90 bp GGACAACACGATGTCTCTCATACCTCCCCAGCCCCAATAACCATCACTCATGGCTCAACCACCTCCCCCTaGAGCATAGCTGGTTCACCT +
Preference number: 4 (lower is better)
Translates to: GQHDVSHTSPAPITITHGSTTSP*SIAGSP
Trigger: AGGTGAACCAGCTATGCTCCAGGGGGAGGTGGTTGA...GCCATGAGTGATGGTTATTGGGGCTGGGGAGGTATGAGAGACATCGTGTTGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000414717.5
CDS-3UTR CCA 90 bp GTCAGCAGTCCTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAATCATGTCCCAGATTTTaGAAGAACAAGCTGTACATT +
Preference number: 4 (lower is better)
Translates to: VSSPALAMESSSAGGRGESCPRF*KNKLYI
Trigger: AATGTACAGCTTGTTCTTCCAAAATCTGGGACATGA...TTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAGGACTGCTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446450.6
3UTR CAA 72 bp AATATTTTCTGGAGCCGGTCCGCTGCTGCCAGAGCCTaGGGCTTACCACCCCCTAGGCAATCTTCAAACTCA +
Preference number: 4 (lower is better)
Translates to: NIFWSRSAAARA*GLPPPRQSSNS
Trigger: TGAGTTTGAAGATTGCCTAGGGGGTGGTAAGCCCAAGGCTCTGGCAGCAGCGGACCGGCTCCAGAAAATATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424071.5
CDS-3UTR TCA 90 bp CTGCCAGAGCCTTGGGCTTACCACCCCCTAGGCAATCTTCAAACTCATAGAGAGCCACTGGCCCCTGAATaGGAGGTAAACTCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: LPEPWAYHPLGNLQTHREPLAPE*EVNSLE
Trigger: TTCCAGAGAGTTTACCTCTCATTCAGGGGCCAGTGG...CTCTCTATGAGTTTGAAGATTGCCTAGGGGGTGGTAAGCCCAAGGCTCTGGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424071.5
CDS-3UTR GCA 90 bp GCATGGAGGACCAAGTCCCAGGTCAATAGCAAGGCCAAGGCCAAGGTTATTATTCATTGCAACCCAAGGTaGCGGCTCCAAGCAGCAGAC +
Preference number: 4 (lower is better)
Translates to: AWRTKSQVNSKAKAKVIIHCNPR*RLQAAD
Trigger: GTCTGCTGCTTGGAGCCGGCACCTTGGGTTGCAATG...AATAATAACCTTGGCCTTGGCCTTGCTATTGACCTGGGACTTGGTCCTCCATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR GCA 90 bp GATTTCAACCACCTCCCCCTGGAGCATAGCTGGTTCACCTTGACTGTGCCTTGGCAGTCTGGTCAGGCTTaGAGTCTGCTCAAGTACCAT +
Preference number: 4 (lower is better)
Translates to: DFNHLPLEHSWFTLTVPWQSGQA*SLLKYH
Trigger: ATGGTACTTGAGCAGACTGCAAGCCTGACCAGACTG...CCAAGGCACAGTCAAGGTGAACCAGCTATGCTCCAGGGGGAGGTGGTTGAAATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000414717.5
CDS-3UTR CCA 90 bp ACCCAAGGTGCCGGCTCCAAGCAGCAGACATTTGACAGACACAACCTTGTCCAAGAGGTTCACCATCCTTaGTCCCATGCCTCCTTTCTG +
Preference number: 4 (lower is better)
Translates to: TQGAGSKQQTFDRHNLVQEVHHP*SHASFL
Trigger: CAGAAAGGAGGCATGGGACCAAGGATGGTGAACCTC...TTGGACAAGGTTGTGTCTGTCAAATGTCTGCTGCTTGGAGCCGGCACCTTGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424071.5
ENST00000434066.6
CDS-3UTR CCA 90 bp TGGTATCTTGAATCCCGAGCAACGCCGAACACTGGCCACTCCTGGGCAGCAGAGAGCTCCTTGCTGCTTTaGTTTCTTCAGACCATGTCT +
Preference number: 4 (lower is better)
Translates to: WYLESRATPNTGHSWAAESSLLL*FLQTMS
Trigger: AGACATGGTCTGAAGAAACCAAAGCAGCAAGGAGCT...CTCTGCTGCCCAGGAGTGGCCAGTGTTCGGCGTTGCTCGGGATTCAAGATACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354449.7
ENST00000354956.9
CDS-3UTR CCA 90 bp GGCCAAGGTTATTATTTAGCTCTGAACTGGTGGTATCTTGAATCCCGAGCAACGTCTATCCCCTCCCCCTaGGGTGTGCTGTGTCCCACC +
Preference number: 4 (lower is better)
Translates to: GQGYYLALNWWYLESRATSIPSP*GVLCPT
Trigger: GGTGGGACACAGCACACCCCAGGGGGAGGGGATAGA...CGTTGCTCGGGATTCAAGATACCACCAGTTCAGAGCTAAATAATAACCTTGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR CCA 90 bp GTGATATGGTGTTTTATACGCTTCCTCGTACGCTGGGGCCAAGGCAGTATACATGGGTCAGCTGCGGTGTaGGATGCTGGAGTTTGGCTG +
Preference number: 4 (lower is better)
Translates to: VIWCFIRFLVRWGQGSIHGSAAV*DAGVWL
Trigger: CAGCCAAACTCCAGCATCCCACACCGCAGCTGACCC...ATGTATACTGCCTTGGCCCCAGCGTACGAGGAAGCGTATAAAACACCATATCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR TCA 90 bp CTTGCCCCGCACACATTTCACTCCCACTGTACTGGGCTTCCAAGCTTTGGCATTAAACCCACTGGCCCCTaGATGAGAGGTAAACTCTCT +
Preference number: 4 (lower is better)
Translates to: LAPHTFHSHCTGLPSFGIKPTGP*MRGKLS
Trigger: AGAGAGTTTACCTCTCATTCAGGGGCCAGTGGGTTT...AATGCCAAAGCTTGGAAGCCCAGTACAGTGGGAGTGAAATGTGTGCGGGGCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR TCA 90 bp GTCCTAGCTACATTGCAACCCAAGGTGCCGGCTCCAAGCAGCAGACATTTGACAGGTCCATACATTCACTaGGGTTCACCATCCTTGGTC +
Preference number: 4 (lower is better)
Translates to: VLATLQPKVPAPSSRHLTGPYIH*GSPSLV
Trigger: GACCAAGGATGGTGAACCTCAGTGAATGTATGGACC...TGTCAAATGTCTGCTGCTTGGAGCCGGCACCTTGGGTTGCAATGTAGCTAGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424071.5
ENST00000434066.6
CDS-3UTR TCA 90 bp GGTTATTATTTAGCTCTGAACTGGTGGTATCTTGAATCCCGAGCAACGCCGAACTCTTGCTTGCAGCAATaGCGGCAGGAAGCCACCGGC +
Preference number: 4 (lower is better)
Translates to: GYYLALNWWYLESRATPNSCLQQ*RQEATG
Trigger: GCCGGTGGCTTCCTGCCGTCATTGCTGCAAGCAAGA...GTTCGGCGTTGCTCGGGATTCAAGATACCACCAGTTCAGAGCTAAATAATAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354449.7
ENST00000354956.9
CDS-3UTR TCA 90 bp TATCTTGAATCCCGAGCAACGCCGAACACTGGCCACTCCTGGGCAGCAGAGGGGGGAACAGTTATTCTATaGGAACACTGCATCTGCATT +
Preference number: 4 (lower is better)
Translates to: YLESRATPNTGHSWAAEGGTVIL*EHCICI
Trigger: AATGCAGATGCAGTGTTCTCATAGAATAACTGTTCC...CCCCTCTGCTGCCCAGGAGTGGCCAGTGTTCGGCGTTGCTCGGGATTCAAGATA
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR GCA 90 bp GCTCTGAACTGGTGGTATCTTGAATCCCGAGCAACGCCGAACACTGGCCACTCCTTCTGGGTCAACTCATaGCAAAACCCAACATCCAAG +
Preference number: 4 (lower is better)
Translates to: ALNWWYLESRATPNTGHSFWVNS*QNPTSK
Trigger: CTTGGATGTTGGGTTTTGGCATGAGTTGACCCAGAA...GGAGTGGCCAGTGTTCGGCGTTGCTCGGGATTCAAGATACCACCAGTTCAGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354449.7
ENST00000354956.9
CDS-3UTR GCA 90 bp ATGGCCCAGTCCAGGAGACCAGTGATTTCAACCACCTCCCCCTGGAGCATAGCTGTCAGGCTTGCAGTCTaGTCAAGTACCATGATGTAT +
Preference number: 4 (lower is better)
Translates to: MAQSRRPVISTTSPWSIAVRLAV*SSTMMY
Trigger: ATACATCATGGTACTTGAGCAGACTGCAAGCCTGAC...AGCTATGCTCCAGGGGGAGGTGGTTGAAATCACTGGTCTCCTGGACTGGGCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000414717.5
CDS-3UTR CCA 90 bp TATCTTGAATCCCGAGCAACGCCGAACACTGGCCACTCCTGGGCAGCAGAGGGGAAGACTCGAGTGTGTTaGTGTTATACAGTGTTCCAA +
Preference number: 4 (lower is better)
Translates to: YLESRATPNTGHSWAAEGKTRVC*CYTVFQ
Trigger: TTGGAACACTGTATAACACCAACACACTCGAGTCTT...CCCCTCTGCTGCCCAGGAGTGGCCAGTGTTCGGCGTTGCTCGGGATTCAAGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354449.7
ENST00000354956.9
CDS-3UTR CCA 90 bp CAAGGTTATTATTTAGCTCTGAACTGGTGGTATCTTGAATCCCGAGCAACGCCGCCGGGGAATATTTTCTaGAGCCGGTCCGCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: QGYYLALNWWYLESRATPPGNIF*SRSAAA
Trigger: GGCAGCAGCGGACCGGCTCCAGAAAATATTCCCCGG...CGGCGTTGCTCGGGATTCAAGATACCACCAGTTCAGAGCTAAATAATAACCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354449.7
ENST00000354956.9
CDS-3UTR CCA 90 bp CAAGGCCAAGGTTATTATTTAGCTCTGAACTGGTGGTATCTTGAATCCCGAGCAGTCCTGCTCTGGCGATaGAGAGCTCCTCAGCAGGCG +
Preference number: 4 (lower is better)
Translates to: QGQGYYLALNWWYLESRAVLLWR*RAPQQA
Trigger: CGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAGGAC...TGCTCGGGATTCAAGATACCACCAGTTCAGAGCTAAATAATAACCTTGGCCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354449.7
ENST00000354956.9
CDS-3UTR CCA 90 bp CAAGGTTATTATTTAGCTCTGAACTGGTGGTATCTTGAATCCCGAGCAACGCCGAGCAACGCCGAACACTaGCCACTCCTGGGCAGCAGA +
Preference number: 4 (lower is better)
Translates to: QGYYLALNWWYLESRATPSNAEH*PLLGSR
Trigger: TCTGCTGCCCAGGAGTGGCCAGTGTTCGGCGTTGCT...CGGCGTTGCTCGGGATTCAAGATACCACCAGTTCAGAGCTAAATAATAACCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354449.7
ENST00000354956.9
CDS-3UTR CCA 90 bp CTTAAACCACATAGTGTACGTGTGCAGTTTCAGCGCCAGGCTGGGTGGGCGGACCCCTTTGAACTCTCTTaGCTGAACAGCAGATTACTG +
Preference number: 4 (lower is better)
Translates to: LKPHSVRVQFQRQAGWADPFELS*LNSRLL
Trigger: CAGTAATCTGCTGTTCAGCCAAGAGAGTTCAAAGGG...GTCCGCCCACCCAGCCTGGCGCTGAAACTGCACACGTACACTATGTGGTTTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR TCA 90 bp CTTAAACCACATAGTGTACGTGTGCAGTTTCAGCGCCAGGCTGGGTGGGCGGACTCATGTCAAAAGCACTaGACTCCAATGTTAAGCGAG +
Preference number: 4 (lower is better)
Translates to: LKPHSVRVQFQRQAGWADSCQKH*TPMLSE
Trigger: CTCGCTTAACATTGGAGTTCAGTGCTTTTGACATGA...GTCCGCCCACCCAGCCTGGCGCTGAAACTGCACACGTACACTATGTGGTTTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR TCA 90 bp ATTGCAACCCAAGGTGCCGGCTCCAAGCAGCAGACATTTGACAGACACAACCTTAAACCCACTGGCCCCTaGATGAGAGGTAAACTCTCT +
Preference number: 4 (lower is better)
Translates to: IATQGAGSKQQTFDRHNLKPTGP*MRGKLS
Trigger: AGAGAGTTTACCTCTCATTCAGGGGCCAGTGGGTTT...AAGGTTGTGTCTGTCAAATGTCTGCTGCTTGGAGCCGGCACCTTGGGTTGCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424071.5
ENST00000434066.6
CDS-3UTR TCA 90 bp CTGCCAGAGCCTTGGGCTTACCACCCCCTAGGCAATCTTCAAACTCATAGAGAGTTTAGTGAAAACCTTTaGTCCAAACCCACTGGCCCC +
Preference number: 4 (lower is better)
Translates to: LPEPWAYHPLGNLQTHREFSENL*SKPTGP
Trigger: GGGGCCAGTGGGTTTGGATCAAAGGTTTTCACTAAA...CTCTCTATGAGTTTGAAGATTGCCTAGGGGGTGGTAAGCCCAAGGCTCTGGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424071.5
CDS-3UTR TCA 90 bp CTAGCTACATTGCAACCCAAGGTGCCGGCTCCAAGCAGCAGACATTTGACAGACTTTAGTGAAAACCTTTaGTCCAAACCCACTGGCCCC +
Preference number: 4 (lower is better)
Translates to: LATLQPKVPAPSSRHLTDFSENL*SKPTGP
Trigger: GGGGCCAGTGGGTTTGGATCAAAGGTTTTCACTAAA...GTCTGTCAAATGTCTGCTGCTTGGAGCCGGCACCTTGGGTTGCAATGTAGCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424071.5
ENST00000434066.6
CDS-3UTR TCA 90 bp GGACAACACGATGTCTCTCATACCTCCCCAGCCCCAATAACCATCACTCATGGCGCAGCTTGGGTTTCTTaGTGCAGCAATGTAAGACCA +
Preference number: 4 (lower is better)
Translates to: GQHDVSHTSPAPITITHGAAWVS*CSNVRP
Trigger: TGGTCTTACATTGCTGCATCAAGAAACCCAAGCTGC...GCCATGAGTGATGGTTATTGGGGCTGGGGAGGTATGAGAGACATCGTGTTGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414717.5
CDS-3UTR TCA 90 bp TATTTAGCTCTGAACTGGTGGTATCTTGAATCCCGAGCAACGCCGAACACTGGCGCAGAAAGCCATGTCTaGGCAGCTCACTCAGTCCTT +
Preference number: 4 (lower is better)
Translates to: YLALNWWYLESRATPNTGAESHV*AAHSVL
Trigger: AAGGACTGAGTGAGCTGCTCAGACATGGCTTTCTGC...GCCAGTGTTCGGCGTTGCTCGGGATTCAAGATACCACCAGTTCAGAGCTAAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR TCA 90 bp GTAGATGGACAACACGATGTCTCTCATACCTCCCCAGCCCCAATAACCATCACTGCCCAAGTAGCCCCTTaGCTGGATTTAGAGGTTGAG +
Preference number: 4 (lower is better)
Translates to: VDGQHDVSHTSPAPITITAQVAP*LDLEVE
Trigger: CTCAACCTCTAAATCCAGTCAAGGGGCTACTTGGGC...AGTGATGGTTATTGGGGCTGGGGAGGTATGAGAGACATCGTGTTGTCCATCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000414717.5
CDS-3UTR GCA 90 bp GCTCTGAACTGGTGGTATCTTGAATCCCGAGCAACGCCGAACACTGGCCACTCCGGTTTTCAAGAGCAGTaGCTGATTTTATGGATTCCC +
Preference number: 4 (lower is better)
Translates to: ALNWWYLESRATPNTGHSGFQEQ*LILWIP
Trigger: GGGAATCCATAAAATCAGGCACTGCTCTTGAAAACC...GGAGTGGCCAGTGTTCGGCGTTGCTCGGGATTCAAGATACCACCAGTTCAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354449.7
ENST00000354956.9
CDS-3UTR GCA 90 bp GCTCTGAACTGGTGGTATCTTGAATCCCGAGCAACGCCGAACACTGGCCACTCCACAATCTGGGCTAAATaGCATTTCTGGAAGCTTCAC +
Preference number: 4 (lower is better)
Translates to: ALNWWYLESRATPNTGHSTIWAK*HFWKLH
Trigger: GTGAAGCTTCCAGAAATGGCATTTAGCCCAGATTGT...GGAGTGGCCAGTGTTCGGCGTTGCTCGGGATTCAAGATACCACCAGTTCAGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354449.7
ENST00000354956.9
CDS-3UTR GCA 90 bp CAAGGTTATTATTTAGCTCTGAACTGGTGGTATCTTGAATCCCGAGCAACGCCGCTGGACGACTCACAGTaGACTGCTGGTCCAAGGTCC +
Preference number: 4 (lower is better)
Translates to: QGYYLALNWWYLESRATPLDDSQ*TAGPRS
Trigger: GGACCTTGGACCAGCAGTGCACTGTGAGTCGTCCAG...CGGCGTTGCTCGGGATTCAAGATACCACCAGTTCAGAGCTAAATAATAACCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354449.7
ENST00000354956.9
CDS-3UTR GCA 90 bp ATTCTTCCGTCCATTTGTTTATGTTCTGCCTCTCCTGCTTCATCCAGAGCCGAATCCGATCGTCACTGCTaGTGGCAATGGCATAGCCCC +
Preference number: 4 (lower is better)
Translates to: ILPSICLCSASPASSRAESDRHC*WQWHSP
Trigger: GGGGCTATGCCATTGCCAGCAGCAGTGACGATCGGA...TTCGGCTCTGGATGAAGCAGGAGAGGCAGAACATAAACAAATGGACGGAAGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427759.5
CDS-3UTR GCA 90 bp GTAGATGGACAACACGATGTCTCTCATACCTCCCCAGCCCCAATAACCATCACTTCATCCGATCGTCACTaGTGCTGGCAATGGCATAGC +
Preference number: 4 (lower is better)
Translates to: VDGQHDVSHTSPAPITITSSDRH*CWQWHS
Trigger: GCTATGCCATTGCCAGCAGCAGTGACGATCGGATGA...AGTGATGGTTATTGGGGCTGGGGAGGTATGAGAGACATCGTGTTGTCCATCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414717.5
CDS-3UTR GCA 90 bp TGGTATCTTGAATCCCGAGCAACGCCGAACACTGGCCACTCCTGGGCAGCAGAGACAAGAAATAAAAACTaGATGGAGGACCAAGTCCCA +
Preference number: 4 (lower is better)
Translates to: WYLESRATPNTGHSWAAETRNKN*MEDQVP
Trigger: TGGGACTTGGTCCTCCATGCAGTTTTTATTTCTTGT...CTCTGCTGCCCAGGAGTGGCCAGTGTTCGGCGTTGCTCGGGATTCAAGATACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR GCA 90 bp CTTAAACCACATAGTGTACGTGTGCAGTTTCAGCGCCAGGCTGGGTGGGCGGACACCATCGTTACGCTGTaGGTAAAGAATGTACAGAGA +
Preference number: 4 (lower is better)
Translates to: LKPHSVRVQFQRQAGWADTIVTL*VKNVQR
Trigger: TCTCTGTACATTCTTTACGCACAGCGTAACGATGGT...GTCCGCCCACCCAGCCTGGCGCTGAAACTGCACACGTACACTATGTGGTTTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR GCA 90 bp GGAATATTTTCTGGAGCCGGTCCGCTGCTGCCAGAGCCTTGGGCTTACCACCCCCTTTTCCCATCCAACTaGTTTAGGACAATCTGTTTT +
Preference number: 4 (lower is better)
Translates to: GIFSGAGPLLPEPWAYHPLFPSN*FRTICF
Trigger: AAAACAGATTGTCCTAAAGCAGTTGGATGGGAAAAG...GGGGTGGTAAGCCCAAGGCTCTGGCAGCAGCGGACCGGCTCCAGAAAATATTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000424071.5
CDS-3UTR CCA 90 bp TCAATAGCAAGGCCAAGGCCAAGGTTATTATTTAGCTCTGAACTGGTGGTATCTTGGGCAGCAACGGGCTaGGGTGGGAGCACTCATGTC +
Preference number: 4 (lower is better)
Translates to: SIARPRPRLLFSSELVVSWAATG*GGSTHV
Trigger: GACATGAGTGCTCCCACCCCAGCCCGTTGCTGCCCA...AGATACCACCAGTTCAGAGCTAAATAATAACCTTGGCCTTGGCCTTGCTATTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354449.7
ENST00000354956.9
CDS-3UTR CCA 90 bp CAAGGTTATTATTTAGCTCTGAACTGGTGGTATCTTGAATCCCGAGCAACGCCGCTCTCGCCCCCTGCATaGTACGGTCACGGAAGCAAA +
Preference number: 4 (lower is better)
Translates to: QGYYLALNWWYLESRATPLSPPA*YGHGSK
Trigger: TTTGCTTCCGTGACCGTACCATGCAGGGGGCGAGAG...CGGCGTTGCTCGGGATTCAAGATACCACCAGTTCAGAGCTAAATAATAACCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354449.7
ENST00000354956.9
CDS-3UTR CCA 90 bp CAAGGTTATTATTTAGCTCTGAACTGGTGGTATCTTGAATCCCGAGCAACGCCGCTCACAGTGCACTGCTaGTCCAAGGTCCGGTCTCTG +
Preference number: 4 (lower is better)
Translates to: QGYYLALNWWYLESRATPLTVHC*SKVRSL
Trigger: CAGAGACCGGACCTTGGACCAGCAGTGCACTGTGAG...CGGCGTTGCTCGGGATTCAAGATACCACCAGTTCAGAGCTAAATAATAACCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354449.7
ENST00000354956.9
CDS-3UTR CCA 90 bp CAAGGTTATTATTTAGCTCTGAACTGGTGGTATCTTGAATCCCGAGCAACGCCGCCATTTGGTCTGTGTTaGGTCACCCCCTCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: QGYYLALNWWYLESRATPPFGLC*VTPSGP
Trigger: TGGCCCTGAGGGGGTGACCCAACACAGACCAAATGG...CGGCGTTGCTCGGGATTCAAGATACCACCAGTTCAGAGCTAAATAATAACCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR CCA 90 bp GCATGGAGGACCAAGTCCCAGGTCAATAGCAAGGCCAAGGCCAAGGTTATTATTGCTCATTTCCCCATTTaGTCTGTGTTGGGTCACCCC +
Preference number: 4 (lower is better)
Translates to: AWRTKSQVNSKAKAKVIIAHFPI*SVLGHP
Trigger: GGGGTGACCCAACACAGACCAAATGGGGAAATGAGC...AATAATAACCTTGGCCTTGGCCTTGCTATTGACCTGGGACTTGGTCCTCCATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR CCA 90 bp GCATGGAGGACCAAGTCCCAGGTCAATAGCAAGGCCAAGGCCAAGGTTATTATTTCCTTGGTGGAAATCTaGCGTCACTGGGTCATGTGG +
Preference number: 4 (lower is better)
Translates to: AWRTKSQVNSKAKAKVIISLVEI*RHWVMW
Trigger: CCACATGACCCAGTGACGCCAGATTTCCACCAAGGA...AATAATAACCTTGGCCTTGGCCTTGCTATTGACCTGGGACTTGGTCCTCCATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR TCA 90 bp CTAGCTACATTGCAACCCAAGGTGCCGGCTCCAAGCAGCAGACATTTGACAGACAGAGGAGGAACTTGTTaGGGAGTACAGGGTTTTCAA +
Preference number: 4 (lower is better)
Translates to: LATLQPKVPAPSSRHLTDRGGTC*GVQGFQ
Trigger: TTGAAAACCCTGTACTCCTCAACAAGTTCCTCCTCT...GTCTGTCAAATGTCTGCTGCTTGGAGCCGGCACCTTGGGTTGCAATGTAGCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424071.5
CDS-3UTR TCA 90 bp TATTTAGCTCTGAACTGGTGGTATCTTGAATCCCGAGCAACGCCGAACACTGGCGGTCCATACATTCACTaGGGTTCACCATCCTTGGTC +
Preference number: 4 (lower is better)
Translates to: YLALNWWYLESRATPNTGGPYIH*GSPSLV
Trigger: GACCAAGGATGGTGAACCTCAGTGAATGTATGGACC...GCCAGTGTTCGGCGTTGCTCGGGATTCAAGATACCACCAGTTCAGAGCTAAATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354449.7
ENST00000354956.9
CDS-3UTR TCA 90 bp GAAGTGCTTGATTCTTCCGTCCATTTGTTTATGTTCTGCCTCTCCTGCTTCATCAATCCCCGGATCTGGTaGGGCACAAGCCCAAGAGAG +
Preference number: 4 (lower is better)
Translates to: EVLDSSVHLFMFCLSCFINPRIW*GTSPRE
Trigger: CTCTCTTGGGCTTGTGCCTCACCAGATCCGGGGATT...GATGAAGCAGGAGAGGCAGAACATAAACAAATGGACGGAAGAATCAAGCACTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427759.5
CDS-3UTR TCA 90 bp AGTCAGGAATTCATGAATTCAGTCTGGTCAGGCTTGCAGTCTGCTCAAGTACCAAGTCCAGGAGACCAGTaGTTTCAACCACCTCCCCCT +
Preference number: 4 (lower is better)
Translates to: SQEFMNSVWSGLQSAQVPSPGDQ*FQPPPP
Trigger: AGGGGGAGGTGGTTGAAATCACTGGTCTCCTGGACT...TGGTACTTGAGCAGACTGCAAGCCTGACCAGACTGAATTCATGAATTCCTGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000414717.5
CDS-3UTR GCA 90 bp GGCAGAAAGCCATGTCTGAGCAGCTCACTCAGTCCTTGGTGGAAATCTGGCGTCGGTTTTCAAGAGCAGTaGCTGATTTTATGGATTCCC +
Preference number: 4 (lower is better)
Translates to: GRKPCLSSSLSPWWKSGVGFQEQ*LILWIP
Trigger: GGGAATCCATAAAATCAGGCACTGCTCTTGAAAACC...GACGCCAGATTTCCACCAAGGACTGAGTGAGCTGCTCAGACATGGCTTTCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR GCA 90 bp CCTTTTAGGGTCCATACATTCACTGAGGTTCACCATCCTTGGTCCCATGCCTCCCCATCCTTGGTCCCATaGCTCCTTTCTGGTTCTTTT +
Preference number: 4 (lower is better)
Translates to: PFRVHTFTEVHHPWSHASPSLVP*LLSGSF
Trigger: AAAAGAACCAGAAAGGAGGCATGGGACCAAGGATGG...GGAGGCATGGGACCAAGGATGGTGAACCTCAGTGAATGTATGGACCCTAAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434066.6
CDS-3UTR CCA 90 bp CAAGGCCAAGGTTATTATTTAGCTCTGAACTGGTGGTATCTTGAATCCCGAGCACAGTGTTCCAATAGCTaGGCAGCAACGGGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: QGQGYYLALNWWYLESRAQCSNS*AATGWG
Trigger: ACCCCAGCCCGTTGCTGCCCAGCTATTGGAACACTG...TGCTCGGGATTCAAGATACCACCAGTTCAGAGCTAAATAATAACCTTGGCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354449.7
ENST00000354956.9
CDS-3UTR CCA 90 bp CTTAAACCACATAGTGTACGTGTGCAGTTTCAGCGCCAGGCTGGGTGGGCGGACGCTAAATGCCATTTCTaGAAGCTTCACTTCGAAGAT +
Preference number: 4 (lower is better)
Translates to: LKPHSVRVQFQRQAGWADAKCHF*KLHFED
Trigger: ATCTTCGAAGTGAAGCTTCCAGAAATGGCATTTAGC...GTCCGCCCACCCAGCCTGGCGCTGAAACTGCACACGTACACTATGTGGTTTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR CCA 90 bp GCTGCGGTGTGGGATGCTGGAGTTTGGCTGCAGGCTGACATCATTTATTTTTGCTGTAACCAGGGATGTTaGCAAAAAGCGATGAGCCCA +
Preference number: 4 (lower is better)
Translates to: AAVWDAGVWLQADIIYFCCNQGC*QKAMSP
Trigger: TGGGCTCATCGCTTTTTGCCAACATCCCTGGTTACA...GCAAAAATAAATGATGTCAGCCTGCAGCCAAACTCCAGCATCCCACACCGCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR CCA 90 bp CTGTACTGGGCTTCCAAGCTTTGGCATTCAGGCCCCTATATTTTCTGTAGGAAAGATCGTCACTGCTGCTaGCAATGGCATAGCCCCCTT +
Preference number: 4 (lower is better)
Translates to: LYWASKLWHSGPYIFCRKDRHCC*QWHSPL
Trigger: AAGGGGGCTATGCCATTGCCAGCAGCAGTGACGATC...TTTCCTACAGAAAATATAGGGGCCTGAATGCCAAAGCTTGGAAGCCCAGTACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR CCA 90 bp CAAGGCCAAGGTTATTATTTAGCTCTGAACTGGTGGTATCTTGAATCCCGAGCACAGTGGAGGACAGGCTaGGAGGCAGAAAGCCATGTC +
Preference number: 4 (lower is better)
Translates to: QGQGYYLALNWWYLESRAQWRTG*EAESHV
Trigger: GACATGGCTTTCTGCCTCCCAGCCTGTCCTCCACTG...TGCTCGGGATTCAAGATACCACCAGTTCAGAGCTAAATAATAACCTTGGCCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR CCA 90 bp GAATTCAGTCTGGTCAGGCTTGCAGTCTGCTCAAGTACCATGATGTATCATGTGACCTTGACTGTGCCTTaGTTCCAGGCCCAAGTAGCC +
Preference number: 4 (lower is better)
Translates to: EFSLVRLAVCSSTMMYHVTLTVP*FQAQVA
Trigger: GGCTACTTGGGCCTGGAACCAAGGCACAGTCAAGGT...CACATGATACATCATGGTACTTGAGCAGACTGCAAGCCTGACCAGACTGAATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414717.5
3UTR CAA 72 bp GCTGAACGACAGCCACTGGAACTTGGACTGGCTACTTaGGGAGAAGCGAAGCCTCATTTGAAATCTACCCTA +
Preference number: 4 (lower is better)
Translates to: AERQPLELGLAT*GEAKPHLKSTL
Trigger: TAGGGTAGATTTCAAATGAGGCTTCGCTTCTCCCAAAGTAGCCAGTCCAAGTTCCAGTGGCTGTCGTTCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354449.7
3UTR CAA 72 bp TTGCAACCCAAGGTGCCGGCTCCAAGCAGCAGACATTaGACAGACACAACCTTGTCCAAGTCTAAAGTAGGA +
Preference number: 4 (lower is better)
Translates to: LQPKVPAPSSRH*TDTTLSKSKVG
Trigger: TCCTACTTTAGACTTGGACAAGGTTGTGTCTGTCAAATGTCTGCTGCTTGGAGCCGGCACCTTGGGTTGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424071.5
ENST00000434066.6
CDS-3UTR TCA 90 bp CCAGTCCAGGAGACCAGTGATTTCAACCACCTCCCCCTGGAGCATAGCTGGTTCCCTTCTCGTTCATATTaGTCAAGAACTTTGGAAGAA +
Preference number: 4 (lower is better)
Translates to: PVQETSDFNHLPLEHSWFPSRSY*SRTLEE
Trigger: TTCTTCCAAAGTTCTTGATCAATATGAACGAGAAGG...GAACCAGCTATGCTCCAGGGGGAGGTGGTTGAAATCACTGGTCTCCTGGACTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000414717.5
CDS-3UTR TCA 90 bp TATTTAGCTCTGAACTGGTGGTATCTTGAATCCCGAGCAACGCCGAACACTGGCAGAAACTGCTCCCTTTaGACTCTCTTGGCTGAACAG +
Preference number: 4 (lower is better)
Translates to: YLALNWWYLESRATPNTGRNCSL*TLLAEQ
Trigger: CTGTTCAGCCAAGAGAGTTCAAAGGGAGCAGTTTCT...GCCAGTGTTCGGCGTTGCTCGGGATTCAAGATACCACCAGTTCAGAGCTAAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR TCA 90 bp CCAGTCCAGGAGACCAGTGATTTCAACCACCTCCCCCTGGAGCATAGCTGGTTCTATTACAGAGACCTTTaGAGATACACAGAGGTAGAT +
Preference number: 4 (lower is better)
Translates to: PVQETSDFNHLPLEHSWFYYRDL*RYTEVD
Trigger: ATCTACCTCTGTGTATCTTCAAAGGTCTCTGTAATA...GAACCAGCTATGCTCCAGGGGGAGGTGGTTGAAATCACTGGTCTCCTGGACTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000414717.5
CDS-3UTR GCA 90 bp CTGGAGAAGTTCACTGGATGCCCAGGCATAGGTATGCTCATGTTGAATCCTCTGCCATCCTTGGTCCCATaGCTCCTTTCTGGTTCTTTT +
Preference number: 4 (lower is better)
Translates to: LEKFTGCPGIGMLMLNPLPSLVP*LLSGSF
Trigger: AAAAGAACCAGAAAGGAGGCATGGGACCAAGGATGG...CAGAGGATTCAACATGAGCATACCTATGCCTGGGCATCCAGTGAACTTCTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424071.5
CDS-3UTR GCA 90 bp CATTTGACAGACACAACCTTGTCCAAGTCTAAAGTAGGAACCAATCTCCAACACCATTGCAACCCAAGGTaGCGGCTCCAAGCAGCAGAC +
Preference number: 4 (lower is better)
Translates to: HLTDTTLSKSKVGTNLQHHCNPR*RLQAAD
Trigger: GTCTGCTGCTTGGAGCCGGCACCTTGGGTTGCAATG...GTGTTGGAGATTGGTTCCTACTTTAGACTTGGACAAGGTTGTGTCTGTCAAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424071.5
ENST00000434066.6
CDS-3UTR GCA 90 bp GGCCAAGGTTATTATTTAGCTCTGAACTGGTGGTATCTTGAATCCCGAGCAACGGGGCCACCACATCATTaGAGAAGTAGCAGCCAAGCT +
Preference number: 4 (lower is better)
Translates to: GQGYYLALNWWYLESRATGPPHH*RSSSQA
Trigger: AGCTTGGCTGCTACTTCTGCAATGATGTGGTGGCCC...CGTTGCTCGGGATTCAAGATACCACCAGTTCAGAGCTAAATAATAACCTTGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354449.7
ENST00000354956.9
CDS-3UTR GCA 90 bp TCAATAGCAAGGCCAAGGCCAAGGTTATTATTTAGCTCTGAACTGGTGGTATCTCGACTCACAGTGCACTaGTGGTCCAAGGTCCGGTCT +
Preference number: 4 (lower is better)
Translates to: SIARPRPRLLFSSELVVSRLTVH*WSKVRS
Trigger: AGACCGGACCTTGGACCAGCAGTGCACTGTGAGTCG...AGATACCACCAGTTCAGAGCTAAATAATAACCTTGGCCTTGGCCTTGCTATTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354449.7
ENST00000354956.9
CDS-3UTR GCA 90 bp ACAGGAAGAAGTCAAAAGTCAGGAATTCATGAATTCAGTCTGGTCAGGCTTGCATCCGATCGTCACTGCTaGTGGCAATGGCATAGCCCC +
Preference number: 4 (lower is better)
Translates to: TGRSQKSGIHEFSLVRLASDRHC*WQWHSP
Trigger: GGGGCTATGCCATTGCCAGCAGCAGTGACGATCGGA...TGCAAGCCTGACCAGACTGAATTCATGAATTCCTGACTTTTGACTTCTTCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414717.5
CDS-3UTR GCA 90 bp GGTTATTATTTAGCTCTGAACTGGTGGTATCTTGAATCCCGAGCAACGCCGAACTCATCCGATCGTCACTaGTGCTGGCAATGGCATAGC +
Preference number: 4 (lower is better)
Translates to: GYYLALNWWYLESRATPNSSDRH*CWQWHS
Trigger: GCTATGCCATTGCCAGCAGCAGTGACGATCGGATGA...GTTCGGCGTTGCTCGGGATTCAAGATACCACCAGTTCAGAGCTAAATAATAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354449.7
ENST00000354956.9
CDS-3UTR GCA 90 bp CTTGATTCTTCCGTCCATTTGTTTATGTTCTGCCTCTCCTGCTTCATCCAGAGCTCATCCGATCGTCACTaGTGCTGGCAATGGCATAGC +
Preference number: 4 (lower is better)
Translates to: LDSSVHLFMFCLSCFIQSSSDRH*CWQWHS
Trigger: GCTATGCCATTGCCAGCAGCAGTGACGATCGGATGA...GCTCTGGATGAAGCAGGAGAGGCAGAACATAAACAAATGGACGGAAGAATCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427759.5
CDS-3UTR GCA 90 bp CAAGGTTATTATTTAGCTCTGAACTGGTGGTATCTTGAATCCCGAGCAACGCCGCACATAGTGTACGTGTaGAGTTTCAGCGCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: QGYYLALNWWYLESRATPHIVYV*SFSARL
Trigger: CAGCCTGGCGCTGAAACTGCACACGTACACTATGTG...CGGCGTTGCTCGGGATTCAAGATACCACCAGTTCAGAGCTAAATAATAACCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR GCA 90 bp GCTCTGAACTGGTGGTATCTTGAATCCCGAGCAACGCCGAACACTGGCCACTCCCCTAGATATACTTACTaGTGGTACAGTTGTACTCTA +
Preference number: 4 (lower is better)
Translates to: ALNWWYLESRATPNTGHSPRYTY*WYSCTL
Trigger: TAGAGTACAACTGTACCAGCAGTAAGTATATCTAGG...GGAGTGGCCAGTGTTCGGCGTTGCTCGGGATTCAAGATACCACCAGTTCAGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR CCA 90 bp TCAATAGCAAGGCCAAGGCCAAGGTTATTATTTAGCTCTGAACTGGTGGTATCTCAGTGTTCCAATAGCTaGGCAGCAACGGGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: SIARPRPRLLFSSELVVSQCSNS*AATGWG
Trigger: ACCCCAGCCCGTTGCTGCCCAGCTATTGGAACACTG...AGATACCACCAGTTCAGAGCTAAATAATAACCTTGGCCTTGGCCTTGCTATTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354449.7
ENST00000354956.9
CDS-3UTR CCA 90 bp GGCCAAGGCCAAGGTTATTATTTAGCTCTGAACTGGTGGTATCTTGAATCCCGAGAGGTTCACCATCCTTaGTCCCATGCCTCCTTTCTG +
Preference number: 4 (lower is better)
Translates to: GQGQGYYLALNWWYLESREVHHP*SHASFL
Trigger: CAGAAAGGAGGCATGGGACCAAGGATGGTGAACCTC...TCGGGATTCAAGATACCACCAGTTCAGAGCTAAATAATAACCTTGGCCTTGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354449.7
ENST00000354956.9
CDS-3UTR CCA 90 bp TGGTATCTTGAATCCCGAGCAACGCCGAACACTGGCCACTCCTGGGCAGCAGAGAGATATACTTACTGCTaGTACAGTTGTACTCTAAGA +
Preference number: 4 (lower is better)
Translates to: WYLESRATPNTGHSWAAERYTYC*YSCTLR
Trigger: TCTTAGAGTACAACTGTACCAGCAGTAAGTATATCT...CTCTGCTGCCCAGGAGTGGCCAGTGTTCGGCGTTGCTCGGGATTCAAGATACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354449.7
3UTR CAA 72 bp CCGGCTCCAAGCAGCAGACATTTGACAGACACAACCTaGTCCAAGTCTAAAGTAGGAACCAATCTCCAACAC +
Preference number: 4 (lower is better)
Translates to: PAPSSRHLTDTT*SKSKVGTNLQH
Trigger: GTGTTGGAGATTGGTTCCTACTTTAGACTTGGACAAGGTTGTGTCTGTCAAATGTCTGCTGCTTGGAGCCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424071.5
ENST00000434066.6
CDS-3UTR TCA 90 bp CAAGGTTATTATTTAGCTCTGAACTGGTGGTATCTTGAATCCCGAGCAACGCCGAAACCCACTGGCCCCTaGATGAGAGGTAAACTCTCT +
Preference number: 4 (lower is better)
Translates to: QGYYLALNWWYLESRATPKPTGP*MRGKLS
Trigger: AGAGAGTTTACCTCTCATTCAGGGGCCAGTGGGTTT...CGGCGTTGCTCGGGATTCAAGATACCACCAGTTCAGAGCTAAATAATAACCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354449.7
ENST00000354956.9
CDS-3UTR TCA 90 bp AAGGTGCCGGCTCCAAGCAGCAGACATTTGACAGACACAACCTTGTCCAAGTCTGTTATCTTCGTCCTTTaGCCTTGGAAGAAATCACTG +
Preference number: 4 (lower is better)
Translates to: KVPAPSSRHLTDTTLSKSVIFVL*PWKKSL
Trigger: CAGTGATTTCTTCCAAGGTCAAAGGACGAAGATAAC...AGACTTGGACAAGGTTGTGTCTGTCAAATGTCTGCTGCTTGGAGCCGGCACCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434066.6
CDS-3UTR TCA 90 bp TCAATAGCAAGGCCAAGGCCAAGGTTATTATTTAGCTCTGAACTGGTGGTATCTGGGCTTGCTCCAGAGTaGCACTGGAGAAGTTCACTG +
Preference number: 4 (lower is better)
Translates to: SIARPRPRLLFSSELVVSGLAPE*HWRSSL
Trigger: CAGTGAACTTCTCCAGTGTCACTCTGGAGCAAGCCC...AGATACCACCAGTTCAGAGCTAAATAATAACCTTGGCCTTGGCCTTGCTATTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354449.7
ENST00000354956.9
CDS-3UTR TCA 90 bp GAAAAGGTCGGAGGACTGGCTCTTGTAGTCACAGAGTGGCTGCAGGCCTTTGAATCAGACCATGTCTCATaGCAACAAATGTGTCAAATC +
Preference number: 4 (lower is better)
Translates to: EKVGGLALVVTEWLQAFESDHVS*QQMCQI
Trigger: GATTTGACACATTTGTTGTCATGAGACATGGTCTGA...TTCAAAGGCCTGCAGCCACTCTGTGACTACAAGAGCCAGTCCTCCGACCTTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR TCA 90 bp TCAATAGCAAGGCCAAGGCCAAGGTTATTATTTAGCTCTGAACTGGTGGTATCTGCCTGCAGTGCGCTCTaGCCTTCTCTTCATGTGTGT +
Preference number: 4 (lower is better)
Translates to: SIARPRPRLLFSSELVVSACSAL*PSLHVC
Trigger: ACACACATGAAGAGAAGGTCAGAGCGCACTGCAGGC...AGATACCACCAGTTCAGAGCTAAATAATAACCTTGGCCTTGGCCTTGCTATTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR GCA 90 bp TCAATAGCAAGGCCAAGGCCAAGGTTATTATTTAGCTCTGAACTGGTGGTATCTACATCTCTGCGGGCTTaGTCCAGAGTGACACTGGAG +
Preference number: 4 (lower is better)
Translates to: SIARPRPRLLFSSELVVSTSLRA*SRVTLE
Trigger: CTCCAGTGTCACTCTGGAGCAAGCCCGCAGAGATGT...AGATACCACCAGTTCAGAGCTAAATAATAACCTTGGCCTTGGCCTTGCTATTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354449.7
ENST00000354956.9
CDS-3UTR GCA 90 bp GGTTATTATTTAGCTCTGAACTGGTGGTATCTTGAATCCCGAGCAACGCCGAACTCCCCAGCTCCTTGCTaGTTTGGTTTCTTCAGACCA +
Preference number: 4 (lower is better)
Translates to: GYYLALNWWYLESRATPNSPAPC*FGFFRP
Trigger: TGGTCTGAAGAAACCAAAGCAGCAAGGAGCTGGGGA...GTTCGGCGTTGCTCGGGATTCAAGATACCACCAGTTCAGAGCTAAATAATAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354449.7
ENST00000354956.9
CDS-3UTR GCA 90 bp TCAATAGCAAGGCCAAGGCCAAGGTTATTATTTAGCTCTGAACTGGTGGTATCTCAGGAGGTCAGCAGATaGCACAGGGTGGTTTGGACA +
Preference number: 4 (lower is better)
Translates to: SIARPRPRLLFSSELVVSQEVSR*HRVVWT
Trigger: TGTCCAAACCACCCTGTGGCATCTGCTGACCTCCTG...AGATACCACCAGTTCAGAGCTAAATAATAACCTTGGCCTTGGCCTTGCTATTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354449.7
ENST00000354956.9
CDS-3UTR GCA 90 bp GCATGGAGGACCAAGTCCCAGGTCAATAGCAAGGCCAAGGCCAAGGTTATTATTTTTTGCATCCCTGTCTaGTTTGTTACAAGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: AWRTKSQVNSKAKAKVIIFCIPV*FVTSSQ
Trigger: CTGGGAGCTTGTAACAAAGCAGACAGGGATGCAAAA...AATAATAACCTTGGCCTTGGCCTTGCTATTGACCTGGGACTTGGTCCTCCATGC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR GCA 90 bp GCTGCGGTGTGGGATGCTGGAGTTTGGCTGCAGGCTGACATCATTTATTTTTGCATGCTGGAGTTTGGCTaGAGGCTGACATCATTTATT +
Preference number: 4 (lower is better)
Translates to: AAVWDAGVWLQADIIYFCMLEFG*RLTSFI
Trigger: AATAAATGATGTCAGCCTGCAGCCAAACTCCAGCAT...GCAAAAATAAATGATGTCAGCCTGCAGCCAAACTCCAGCATCCCACACCGCAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR GCA 90 bp TTGGAAGAAATCACTGTAGTGTTTAAGCAAGGAAACCAGCACCATGTTCTCATCGCCGCCATTATTTCTTaGCGCCGCTCAACTTCCGGC +
Preference number: 4 (lower is better)
Translates to: LEEITVVFKQGNQHHVLIAAIIS*RRSTSG
Trigger: GCCGGAAGTTGAGCGGCGGCAAGAAATAATGGCGGC...GATGAGAACATGGTGCTGGTTTCCTTGCTTAAACACTACAGTGATTTCTTCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418682.5
CDS-3UTR CCA 90 bp GGCCAAGGCCAAGGTTATTATTTAGCTCTGAACTGGTGGTATCTTGAATCCCGAAGGAAGACGACATCATaGCTTTCGATGAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: GQGQGYYLALNWWYLESRRKTTS*LSMSCS
Trigger: GGAGCAGCTCATCGAAAGCCATGATGTCGTCTTCCT...TCGGGATTCAAGATACCACCAGTTCAGAGCTAAATAATAACCTTGGCCTTGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354449.7
ENST00000354956.9
CDS-3UTR CCA 90 bp TCAATAGCAAGGCCAAGGCCAAGGTTATTATTTAGCTCTGAACTGGTGGTATCTGATCGTCACTGCTGCTaGCAATGGCATAGCCCCCTT +
Preference number: 4 (lower is better)
Translates to: SIARPRPRLLFSSELVVSDRHCC*QWHSPL
Trigger: AAGGGGGCTATGCCATTGCCAGCAGCAGTGACGATC...AGATACCACCAGTTCAGAGCTAAATAATAACCTTGGCCTTGGCCTTGCTATTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354449.7
ENST00000354956.9
CDS-3UTR CCA 90 bp GGCCAAGGCCAAGGTTATTATTTAGCTCTGAACTGGTGGTATCTTGAATCCCGATCACTCCCACTGTACTaGGCTTCCAAGCTTTGGCAT +
Preference number: 4 (lower is better)
Translates to: GQGQGYYLALNWWYLESRSLPLY*ASKLWH
Trigger: ATGCCAAAGCTTGGAAGCCCAGTACAGTGGGAGTGA...TCGGGATTCAAGATACCACCAGTTCAGAGCTAAATAATAACCTTGGCCTTGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR CCA 90 bp TCAATAGCAAGGCCAAGGCCAAGGTTATTATTTAGCTCTGAACTGGTGGTATCTAGCTCCCAGGGGAGGTaGGGTTTGTGTCTTCCAACT +
Preference number: 4 (lower is better)
Translates to: SIARPRPRLLFSSELVVSSSQGR*GLCLPT
Trigger: AGTTGGAAGACACAAACCCCACCTCCCCTGGGAGCT...AGATACCACCAGTTCAGAGCTAAATAATAACCTTGGCCTTGGCCTTGCTATTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR CCA 90 bp AGTCAGGAATTCATGAATTCAGTCTGGTCAGGCTTGCAGTCTGCTCAAGTACCATTGAGTCCCTGGCAGTaGGGTAGCATCTTACAGGAA +
Preference number: 4 (lower is better)
Translates to: SQEFMNSVWSGLQSAQVPLSPWQ*GSILQE
Trigger: TTCCTGTAAGATGCTACCCCACTGCCAGGGACTCAA...TGGTACTTGAGCAGACTGCAAGCCTGACCAGACTGAATTCATGAATTCCTGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414717.5
CDS-3UTR TCA 90 bp GGTTATTATTTAGCTCTGAACTGGTGGTATCTTGAATCCCGAGCAACGCCGAACTTTAGTGAAAACCTTTaGTCCAAACCCACTGGCCCC +
Preference number: 4 (lower is better)
Translates to: GYYLALNWWYLESRATPNFSENL*SKPTGP
Trigger: GGGGCCAGTGGGTTTGGATCAAAGGTTTTCACTAAA...GTTCGGCGTTGCTCGGGATTCAAGATACCACCAGTTCAGAGCTAAATAATAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354449.7
ENST00000354956.9
CDS-3UTR TCA 90 bp TATTTAGCTCTGAACTGGTGGTATCTTGAATCCCGAGCAACGCCGAACACTGGCGTTATCTTCGTCCTTTaGCCTTGGAAGAAATCACTG +
Preference number: 4 (lower is better)
Translates to: YLALNWWYLESRATPNTGVIFVL*PWKKSL
Trigger: CAGTGATTTCTTCCAAGGTCAAAGGACGAAGATAAC...GCCAGTGTTCGGCGTTGCTCGGGATTCAAGATACCACCAGTTCAGAGCTAAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354449.7
ENST00000354956.9
CDS-3UTR TCA 90 bp TTCTTCCGTCCATTTGTTTATGTTCTGCCTCTCCTGCTTCATCCAGAGCCGAAGGACATTATCAAACCGTaGAAGAAATCCCCGGATCTG +
Preference number: 4 (lower is better)
Translates to: FFRPFVYVLPLLLHPEPKDIIKP*KKSPDL
Trigger: CAGATCCGGGGATTTCTTTCACGGTTTGATAATGTC...CTTCGGCTCTGGATGAAGCAGGAGAGGCAGAACATAAACAAATGGACGGAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427759.5
CDS-3UTR TCA 90 bp TCGTTGAGAACACTTTTCTATATGGGTGATTTTGAGACCATCGTTACGCTGTGCAGGTCTCTTTGTCAGTaGACAAGGGCGTCACTCTGG +
Preference number: 4 (lower is better)
Translates to: SLRTLFYMGDFETIVTLCRSLCQ*TRASLW
Trigger: CCAGAGTGACGCCCTTGTTCACTGACAAAGAGACCT...GCACAGCGTAACGATGGTCTCAAAATCACCCATATAGAAAAGTGTTCTCAACGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR GCA 90 bp GGGCAGGATAGCAAAACCAATAGTAGAAGTGGTACTTCTTTAGATCTGCAAATGAGGATCCCCCGTAGCTaGCGCCATTATTTCTTGCCG +
Preference number: 4 (lower is better)
Translates to: GQDSKTNSRSGTSLDLQMRIPRS*RHYFLP
Trigger: CGGCAAGAAATAATGGCGGCAGCTACGGGGGATCCT...CATTTGCAGATCTAAAGAAGTACCACTTCTACTATTGGTTTTGCTATCCTGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418682.5
CDS-3UTR GCA 90 bp ACCTTGTCCAAGTCTAAAGTAGGAACCAATCTCCAACACATCAGTTTGAGATTTCATTGCAACCCAAGGTaGCGGCTCCAAGCAGCAGAC +
Preference number: 4 (lower is better)
Translates to: TLSKSKVGTNLQHISLRFHCNPR*RLQAAD
Trigger: GTCTGCTGCTTGGAGCCGGCACCTTGGGTTGCAATG...AAATCTCAAACTGATGTGTTGGAGATTGGTTCCTACTTTAGACTTGGACAAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424071.5
ENST00000434066.6
CDS-3UTR GCA 90 bp AGTCAGGAATTCATGAATTCAGTCTGGTCAGGCTTGCAGTCTGCTCAAGTACCATGTACATTTGTCAAATaGCAGGCTGACGGGAAGGAC +
Preference number: 4 (lower is better)
Translates to: SQEFMNSVWSGLQSAQVPCTFVK*QADGKD
Trigger: GTCCTTCCCGTCAGCCTGGCATTTGACAAATGTACA...TGGTACTTGAGCAGACTGCAAGCCTGACCAGACTGAATTCATGAATTCCTGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414717.5
CDS-3UTR GCA 90 bp TCATTGTTCATCTACCTTATGGAACAAAGCAGCCAAGAATCAGATGGGCGAGGAATGTTCTGCCTCTCCTaGTTCATCCAGAGCCGAAGA +
Preference number: 4 (lower is better)
Translates to: SLFIYLMEQSSQESDGRGMFCLS*FIQSRR
Trigger: TCTTCGGCTCTGGATGAAGCAGGAGAGGCAGAACAT...TCCTCGCCCATCTGATTCTTGGCTGCTTTGTTCCATAAGGTAGATGAACAATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427759.5
CDS-3UTR CCA 90 bp CAAGGCCAAGGTTATTATTTAGCTCTGAACTGGTGGTATCTTGAATCCCGAGCAAGGAAGACGACATCATaGCTTTCGATGAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: QGQGYYLALNWWYLESRARKTTS*LSMSCS
Trigger: GGAGCAGCTCATCGAAAGCCATGATGTCGTCTTCCT...TGCTCGGGATTCAAGATACCACCAGTTCAGAGCTAAATAATAACCTTGGCCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354449.7
ENST00000354956.9
CDS-3UTR CCA 90 bp GGCCAAGGTTATTATTTAGCTCTGAACTGGTGGTATCTTGAATCCCGAGCAACGTGTAACCAGGGATGTTaGCAAAAAGCGATGAGCCCA +
Preference number: 4 (lower is better)
Translates to: GQGYYLALNWWYLESRATCNQGC*QKAMSP
Trigger: TGGGCTCATCGCTTTTTGCCAACATCCCTGGTTACA...CGTTGCTCGGGATTCAAGATACCACCAGTTCAGAGCTAAATAATAACCTTGGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354449.7
ENST00000354956.9
CDS-3UTR CCA 90 bp CAGAGACCTTTGAAGATACACAGAGGTAGATGGACAACACGATGTCTCTCATACAAGCCCAAGAGAGGTTaGAGGCTCATTCATCCGATC +
Preference number: 4 (lower is better)
Translates to: QRPLKIHRGRWTTRCLSYKPKRG*RLIHPI
Trigger: GATCGGATGAATGAGCCTCCAACCTCTCTTGGGCTT...GTATGAGAGACATCGTGTTGTCCATCTACCTCTGTGTATCTTCAAAGGTCTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414717.5
CDS-3UTR CCA 90 bp TCATTGTTCATCTACCTTATGGAACAAAGCAGCCAAGAATCAGATGGGCGAGGAAAGCCCAAGAGAGGTTaGAGGCTCATTCATCCGATC +
Preference number: 4 (lower is better)
Translates to: SLFIYLMEQSSQESDGRGKPKRG*RLIHPI
Trigger: GATCGGATGAATGAGCCTCCAACCTCTCTTGGGCTT...TCCTCGCCCATCTGATTCTTGGCTGCTTTGTTCCATAAGGTAGATGAACAATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427759.5
CDS-3UTR CCA 90 bp GGTTATTATTTAGCTCTGAACTGGTGGTATCTTGAATCCCGAGCAACGCCGAACCTTGTAGTCACAGAGTaGCTGCAGGCCTTTGAAAAG +
Preference number: 4 (lower is better)
Translates to: GYYLALNWWYLESRATPNLVVTE*LQAFEK
Trigger: CTTTTCAAAGGCCTGCAGCCACTCTGTGACTACAAG...GTTCGGCGTTGCTCGGGATTCAAGATACCACCAGTTCAGAGCTAAATAATAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR CCA 90 bp GCTGCGGTGTGGGATGCTGGAGTTTGGCTGCAGGCTGACATCATTTATTTTTGCTTGAATTTTGGAAATTaGCACTGGGTGAAAAGGTCG +
Preference number: 4 (lower is better)
Translates to: AAVWDAGVWLQADIIYFCLNFGN*HWVKRS
Trigger: CGACCTTTTCACCCAGTGCCAATTTCCAAAATTCAA...GCAAAAATAAATGATGTCAGCCTGCAGCCAAACTCCAGCATCCCACACCGCAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000354449.7
3UTR CAA 72 bp AAGTTCACTGGATGCCCAGGCATAGGTATGCTCATGTaGAATCCTCTGGCATTCACACCGGGGAATATTTTC +
Preference number: 4 (lower is better)
Translates to: KFTGCPGIGMLM*NPLAFTPGNIF
Trigger: GAAAATATTCCCCGGTGTGAATGCCAGAGGATTCAACATGAGCATACCTATGCCTGGGCATCCAGTGAACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424071.5
CDS-3UTR TCA 90 bp CTGTACTGGGCTTCCAAGCTTTGGCATTCAGGCCCCTATATTTTCTGTAGGAAAAGAGGAGGAACTTGTTaGGGAGTACAGGGTTTTCAA +
Preference number: 4 (lower is better)
Translates to: LYWASKLWHSGPYIFCRKRGGTC*GVQGFQ
Trigger: TTGAAAACCCTGTACTCCTCAACAAGTTCCTCCTCT...TTTCCTACAGAAAATATAGGGGCCTGAATGCCAAAGCTTGGAAGCCCAGTACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR GCA 90 bp AGTTTGAGATTTAGATCCACTGATGACTCAGCTAACCTTTTAGGGTCCATACATACATCTCTGCGGGCTTaGTCCAGAGTGACACTGGAG +
Preference number: 4 (lower is better)
Translates to: SLRFRSTDDSANLLGSIHTSLRA*SRVTLE
Trigger: CTCCAGTGTCACTCTGGAGCAAGCCCGCAGAGATGT...ATGTATGGACCCTAAAAGGTTAGCTGAGTCATCAGTGGATCTAAATCTCAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424071.5
CDS-3UTR GCA 90 bp GAAGTGCTTGATTCTTCCGTCCATTTGTTTATGTTCTGCCTCTCCTGCTTCATCTGTACATTTGTCAAATaGCAGGCTGACGGGAAGGAC +
Preference number: 4 (lower is better)
Translates to: EVLDSSVHLFMFCLSCFICTFVK*QADGKD
Trigger: GTCCTTCCCGTCAGCCTGGCATTTGACAAATGTACA...GATGAAGCAGGAGAGGCAGAACATAAACAAATGGACGGAAGAATCAAGCACTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427759.5
CDS-3UTR CCA 90 bp CATTTGACAGACACAACCTTGTCCAAGTCTAAAGTAGGAACCAATCTCCAACACAGGAAGACGACATCATaGCTTTCGATGAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: HLTDTTLSKSKVGTNLQHRKTTS*LSMSCS
Trigger: GGAGCAGCTCATCGAAAGCCATGATGTCGTCTTCCT...GTGTTGGAGATTGGTTCCTACTTTAGACTTGGACAAGGTTGTGTCTGTCAAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424071.5
CDS-3UTR CCA 90 bp GCATGGAGGACCAAGTCCCAGGTCAATAGCAAGGCCAAGGCCAAGGTTATTATTTATTTAGCTCTGAACTaGTGGTATCTTGAATCCCGA +
Preference number: 4 (lower is better)
Translates to: AWRTKSQVNSKAKAKVIIYLALN*WYLESR
Trigger: TCGGGATTCAAGATACCACCAGTTCAGAGCTAAATA...AATAATAACCTTGGCCTTGGCCTTGCTATTGACCTGGGACTTGGTCCTCCATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354449.7
3UTR CAA 72 bp AACACTGCATCTGCATTCATAGCCACGAGTTTGTTATaGCTACAGGCTACTGAGCGTCGTAACAGGAAAACC +
Preference number: 4 (lower is better)
Translates to: NTASAFIATSLL*LQATERRNRKT
Trigger: GGTTTTCCTGTTACGACGCTCAGTAGCCTGTAGCAATAACAAACTCGTGGCTATGAATGCAGATGCAGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354449.7
3UTR CAA 72 bp TATGAGAACACTGCATCTGCATTCATAGCCACGAGTTaGTTATTGCTACAGGCTACTGAGCGTCGTAACAGG +
Preference number: 4 (lower is better)
Translates to: YENTASAFIATS*LLLQATERRNR
Trigger: CCTGTTACGACGCTCAGTAGCCTGTAGCAATAACAAACTCGTGGCTATGAATGCAGATGCAGTGTTCTCATA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR TCA 90 bp GGTTATTATTTAGCTCTGAACTGGTGGTATCTTGAATCCCGAGCAACGCCGAACTCATGTCAAAAGCACTaGACTCCAATGTTAAGCGAG +
Preference number: 4 (lower is better)
Translates to: GYYLALNWWYLESRATPNSCQKH*TPMLSE
Trigger: CTCGCTTAACATTGGAGTTCAGTGCTTTTGACATGA...GTTCGGCGTTGCTCGGGATTCAAGATACCACCAGTTCAGAGCTAAATAATAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354449.7
ENST00000354956.9
CDS-3UTR TCA 90 bp AAAGTAGGAACCAATCTCCAACACATCAGTTTGAGATTTAGATCCACTGATGACCCACTGGCCCCTGAATaGGAGGTAAACTCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: KVGTNLQHISLRFRSTDDPLAPE*EVNSLE
Trigger: TTCCAGAGAGTTTACCTCTCATTCAGGGGCCAGTGG...GTCATCAGTGGATCTAAATCTCAAACTGATGTGTTGGAGATTGGTTCCTACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424071.5
ENST00000434066.6
CDS-3UTR TCA 90 bp ATCAGATGGGCGAGGAATAAAAGATTCCATTCACAGAAGTGCTTGATTCTTCCGGCAGCTTGGGTTTCTTaGTGCAGCAATGTAAGACCA +
Preference number: 4 (lower is better)
Translates to: IRWARNKRFHSQKCLILPAAWVS*CSNVRP
Trigger: TGGTCTTACATTGCTGCATCAAGAAACCCAAGCTGC...CGGAAGAATCAAGCACTTCTGTGAATGGAATCTTTTATTCCTCGCCCATCTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427759.5
CDS-3UTR TCA 90 bp CAGAGACCTTTGAAGATACACAGAGGTAGATGGACAACACGATGTCTCTCATACGACATTATCAAACCGTaGAAGAAATCCCCGGATCTG +
Preference number: 4 (lower is better)
Translates to: QRPLKIHRGRWTTRCLSYDIIKP*KKSPDL
Trigger: CAGATCCGGGGATTTCTTTCACGGTTTGATAATGTC...GTATGAGAGACATCGTGTTGTCCATCTACCTCTGTGTATCTTCAAAGGTCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414717.5
CDS-3UTR TCA 90 bp AAGTCAGGAATTCATGAATTCAGTCTGGTCAGGCTTGCAGTCTGCTCAAGTACCAAAGTCAGGAATTCATaGATTCAGTCTGGTCAGGCT +
Preference number: 4 (lower is better)
Translates to: KSGIHEFSLVRLAVCSSTKVRNS*IQSGQA
Trigger: AGCCTGACCAGACTGAATTCATGAATTCCTGACTTT...GGTACTTGAGCAGACTGCAAGCCTGACCAGACTGAATTCATGAATTCCTGACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414717.5
CDS-3UTR GCA 90 bp CAAGGCCAAGGTTATTATTTAGCTCTGAACTGGTGGTATCTTGAATCCCGAGCACTTTTCCCATCCAACTaGTTTAGGACAATCTGGGCT +
Preference number: 4 (lower is better)
Translates to: QGQGYYLALNWWYLESRALFPSN*FRTIWA
Trigger: AGCCCAGATTGTCCTAAAGCAGTTGGATGGGAAAAG...TGCTCGGGATTCAAGATACCACCAGTTCAGAGCTAAATAATAACCTTGGCCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354449.7
ENST00000354956.9
CDS-3UTR GCA 90 bp TCAATAGCAAGGCCAAGGCCAAGGTTATTATTTAGCTCTGAACTGGTGGTATCTCCATCCTTGGTCCCATaGCTCCTTTCTGGTTCTTTT +
Preference number: 4 (lower is better)
Translates to: SIARPRPRLLFSSELVVSPSLVP*LLSGSF
Trigger: AAAAGAACCAGAAAGGAGGCATGGGACCAAGGATGG...AGATACCACCAGTTCAGAGCTAAATAATAACCTTGGCCTTGGCCTTGCTATTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354449.7
ENST00000354956.9
CDS-3UTR GCA 90 bp TCGTTGAGAACACTTTTCTATATGGGTGATTTTGAGACCATCGTTACGCTGTGCCCACGAGTTTGTTATTaGTACAGGCTACTGAGCGTC +
Preference number: 4 (lower is better)
Translates to: SLRTLFYMGDFETIVTLCPRVCY*YRLLSV
Trigger: GACGCTCAGTAGCCTGTAGCAATAACAAACTCGTGG...GCACAGCGTAACGATGGTCTCAAAATCACCCATATAGAAAAGTGTTCTCAACGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR GCA 90 bp CTTCCGTCCATTTGTTTATGTTCTGCCTCTCCTGCTTCATCCAGAGCCGAAGATTTCCATTCACAGAAGTaGTTGATTCTTCCGTCCATT +
Preference number: 4 (lower is better)
Translates to: LPSICLCSASPASSRAEDFHSQK*LILPSI
Trigger: AATGGACGGAAGAATCAAGCACTTCTGTGAATGGAA...ATCTTCGGCTCTGGATGAAGCAGGAGAGGCAGAACATAAACAAATGGACGGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427759.5
CDS-3UTR CCA 90 bp CAAGGCCAAGGTTATTATTTAGCTCTGAACTGGTGGTATCTTGAATCCCGAGCATCGTTCAGCTTCTTCTaGGTCAACTCATGCCAAAAC +
Preference number: 4 (lower is better)
Translates to: QGQGYYLALNWWYLESRASFSFF*VNSCQN
Trigger: GTTTTGGCATGAGTTGACCCAGAAGAAGCTGAACGA...TGCTCGGGATTCAAGATACCACCAGTTCAGAGCTAAATAATAACCTTGGCCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354449.7
ENST00000354956.9
CDS-3UTR CCA 90 bp ACCTTGTCCAAGTCTAAAGTAGGAACCAATCTCCAACACATCAGTTTGAGATTTGGCCATCCAGGGTACTaGGCTAAGTTACAGGGATCA +
Preference number: 4 (lower is better)
Translates to: TLSKSKVGTNLQHISLRFGHPGY*AKLQGS
Trigger: TGATCCCTGTAACTTAGCCCAGTACCCTGGATGGCC...AAATCTCAAACTGATGTGTTGGAGATTGGTTCCTACTTTAGACTTGGACAAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434066.6
CDS-3UTR CCA 90 bp CAAGGTTATTATTTAGCTCTGAACTGGTGGTATCTTGAATCCCGAGCAACGCCGACAACTTCAACAGACTaGAAACTGCTACTCCATCTG +
Preference number: 4 (lower is better)
Translates to: QGYYLALNWWYLESRATPTTSTD*KLLLHL
Trigger: CAGATGGAGTAGCAGTTTCCAGTCTGTTGAAGTTGT...CGGCGTTGCTCGGGATTCAAGATACCACCAGTTCAGAGCTAAATAATAACCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354449.7
ENST00000354956.9
CDS-3UTR CCA 90 bp AGTCAGGAATTCATGAATTCAGTCTGGTCAGGCTTGCAGTCTGCTCAAGTACCAATACACAGAGGTAGATaGACAACACGATGTCTCTCA +
Preference number: 4 (lower is better)
Translates to: SQEFMNSVWSGLQSAQVPIHRGR*TTRCLS
Trigger: TGAGAGACATCGTGTTGTCCATCTACCTCTGTGTAT...TGGTACTTGAGCAGACTGCAAGCCTGACCAGACTGAATTCATGAATTCCTGACT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414717.5
3UTR CAA 72 bp CTTGGACTGGCTACTTTGGGAGAAGCGAAGCCTCATTaGAAATCTACCCTACTAAATCCTACTGTTGTAAGG +
Preference number: 4 (lower is better)
Translates to: LGLATLGEAKPH*KSTLLNPTVVR
Trigger: CCTTACAACAGTAGGATTTAGTAGGGTAGATTTCAAATGAGGCTTCGCTTCTCCCAAAGTAGCCAGTCCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354449.7
3UTR CAA 72 bp ATTCCATTCACAGAAGTGCTTGATTCTTCCGTCCATTaGTTTATGTTCTGCCTCTCCTGCTTCATCCAGAGC +
Preference number: 4 (lower is better)
Translates to: IPFTEVLDSSVH*FMFCLSCFIQS
Trigger: GCTCTGGATGAAGCAGGAGAGGCAGAACATAAACAAATGGACGGAAGAATCAAGCACTTCTGTGAATGGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427759.5
CDS-3UTR TCA 90 bp TCAATAGCAAGGCCAAGGCCAAGGTTATTATTTAGCTCTGAACTGGTGGTATCTTCTTATCTGCAGTCTTaGAAGACTCGAGTGTGTTGG +
Preference number: 4 (lower is better)
Translates to: SIARPRPRLLFSSELVVSSYLQS*KTRVCW
Trigger: CCAACACACTCGAGTCTTTCAAGACTGCAGATAAGA...AGATACCACCAGTTCAGAGCTAAATAATAACCTTGGCCTTGGCCTTGCTATTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354449.7
ENST00000354956.9
CDS-3UTR TCA 90 bp CTGTACTGGGCTTCCAAGCTTTGGCATTCAGGCCCCTATATTTTCTGTAGGAAATTCAAGAGCAGTGCCTaGTTTTATGGATTCCCATAT +
Preference number: 4 (lower is better)
Translates to: LYWASKLWHSGPYIFCRKFKSSA*FYGFPY
Trigger: ATATGGGAATCCATAAAATCAGGCACTGCTCTTGAA...TTTCCTACAGAAAATATAGGGGCCTGAATGCCAAAGCTTGGAAGCCCAGTACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR TCA 90 bp GGCCAAGGCCAAGGTTATTATTTAGCTCTGAACTGGTGGTATCTTGAATCCCGATTCAAGAGCAGTGCCTaGTTTTATGGATTCCCATAT +
Preference number: 4 (lower is better)
Translates to: GQGQGYYLALNWWYLESRFKSSA*FYGFPY
Trigger: ATATGGGAATCCATAAAATCAGGCACTGCTCTTGAA...TCGGGATTCAAGATACCACCAGTTCAGAGCTAAATAATAACCTTGGCCTTGGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354449.7
ENST00000354956.9
CDS-3UTR TCA 90 bp AGTTTGAGATTTAGATCCACTGATGACTCAGCTAACCTTTTAGGGTCCATACATAAACCCACTGGCCCCTaGATGAGAGGTAAACTCTCT +
Preference number: 4 (lower is better)
Translates to: SLRFRSTDDSANLLGSIHKPTGP*MRGKLS
Trigger: AGAGAGTTTACCTCTCATTCAGGGGCCAGTGGGTTT...ATGTATGGACCCTAAAAGGTTAGCTGAGTCATCAGTGGATCTAAATCTCAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424071.5
ENST00000434066.6
CDS-3UTR TCA 90 bp ACCTTGTCCAAGTCTAAAGTAGGAACCAATCTCCAACACATCAGTTTGAGATTTGGTCCATACATTCACTaGGGTTCACCATCCTTGGTC +
Preference number: 4 (lower is better)
Translates to: TLSKSKVGTNLQHISLRFGPYIH*GSPSLV
Trigger: GACCAAGGATGGTGAACCTCAGTGAATGTATGGACC...AAATCTCAAACTGATGTGTTGGAGATTGGTTCCTACTTTAGACTTGGACAAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424071.5
ENST00000434066.6
CDS-3UTR TCA 90 bp CAGAGACCTTTGAAGATACACAGAGGTAGATGGACAACACGATGTCTCTCATACTCTGCTCAAGTACCATaGTGTATCATGTGCCTCATT +
Preference number: 4 (lower is better)
Translates to: QRPLKIHRGRWTTRCLSYSAQVP*CIMCLI
Trigger: AATGAGGCACATGATACATCATGGTACTTGAGCAGA...GTATGAGAGACATCGTGTTGTCCATCTACCTCTGTGTATCTTCAAAGGTCTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414717.5
CDS-3UTR GCA 90 bp ATCATTGTTCATCTACCTTATGGAACAAAGCAGCCAAGAATCAGATGGGCGAGGCATTTGTTTATGTTCTaGCTCTCCTGCTTCATCCAG +
Preference number: 4 (lower is better)
Translates to: IIVHLPYGTKQPRIRWARHLFMF*LSCFIQ
Trigger: CTGGATGAAGCAGGAGAGGCAGAACATAAACAAATG...CCTCGCCCATCTGATTCTTGGCTGCTTTGTTCCATAAGGTAGATGAACAATGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427759.5
CDS-3UTR CCA 90 bp GGCCAAGGTTATTATTTAGCTCTGAACTGGTGGTATCTTGAATCCCGAGCAACGGCTAAATGCCATTTCTaGAAGCTTCACTTCGAAGAT +
Preference number: 4 (lower is better)
Translates to: GQGYYLALNWWYLESRATAKCHF*KLHFED
Trigger: ATCTTCGAAGTGAAGCTTCCAGAAATGGCATTTAGC...CGTTGCTCGGGATTCAAGATACCACCAGTTCAGAGCTAAATAATAACCTTGGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354449.7
ENST00000354956.9
CDS-3UTR CCA 90 bp AAGTGCTTGATTCTTCCGTCCATTTGTTTATGTTCTGCCTCTCCTGCTTCATCCCAGCCAAGAATCAGATaGGCGAGGAATAAAAGATTC +
Preference number: 4 (lower is better)
Translates to: KCLILPSICLCSASPASSQPRIR*ARNKRF
Trigger: GAATCTTTTATTCCTCGCCCATCTGATTCTTGGCTG...GGATGAAGCAGGAGAGGCAGAACATAAACAAATGGACGGAAGAATCAAGCACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427759.5
CDS-3UTR TCA 90 bp AGTCCTAGATATACTTACTGCTGGTACAGTTGTACTCTAAGATTGGTATTTGATCCACTGGCCCCTGAATaGGAGGTAAACTCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: SPRYTYCWYSCTLRLVFDPLAPE*EVNSLE
Trigger: TTCCAGAGAGTTTACCTCTCATTCAGGGGCCAGTGG...ATCAAATACCAATCTTAGAGTACAACTGTACCAGCAGTAAGTATATCTAGGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR TCA 90 bp ATCACTGTAGTGTTTAAGCAAGGAAACCAGCACCATGTTCTCATCATACTTGATTTTAGTGAAAACCTTTaGTCCAAACCCACTGGCCCC +
Preference number: 4 (lower is better)
Translates to: ITVVFKQGNQHHVLIILDFSENL*SKPTGP
Trigger: GGGGCCAGTGGGTTTGGATCAAAGGTTTTCACTAAA...ATCAAGTATGATGAGAACATGGTGCTGGTTTCCTTGCTTAAACACTACAGTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418682.5
CDS-3UTR CCA 90 bp TTGGAAGAAATCACTGTAGTGTTTAAGCAAGGAAACCAGCACCATGTTCTCATCTCGTTCAGCTTCTTCTaGGTCAACTCATGCCAAAAC +
Preference number: 4 (lower is better)
Translates to: LEEITVVFKQGNQHHVLISFSFF*VNSCQN
Trigger: GTTTTGGCATGAGTTGACCCAGAAGAAGCTGAACGA...GATGAGAACATGGTGCTGGTTTCCTTGCTTAAACACTACAGTGATTTCTTCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418682.5
CDS-3UTR CCA 90 bp AGTTTGAGATTTAGATCCACTGATGACTCAGCTAACCTTTTAGGGTCCATACATCCCATGCCTCCTTTCTaGTTCTTTTCCCATCCAACT +
Preference number: 4 (lower is better)
Translates to: SLRFRSTDDSANLLGSIHPMPPF*FFSHPT
Trigger: AGTTGGATGGGAAAAGAACCAGAAAGGAGGCATGGG...ATGTATGGACCCTAAAAGGTTAGCTGAGTCATCAGTGGATCTAAATCTCAAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424071.5
ENST00000434066.6
CDS-3UTR CCA 90 bp TCAATAGCAAGGCCAAGGCCAAGGTTATTATTTAGCTCTGAACTGGTGGTATCTACAGCTGCTCCTTTTTaGTCAATGAGCGTTTCTATC +
Preference number: 4 (lower is better)
Translates to: SIARPRPRLLFSSELVVSTAAPF*SMSVSI
Trigger: GATAGAAACGCTCATTGACCAAAAAGGAGCAGCTGT...AGATACCACCAGTTCAGAGCTAAATAATAACCTTGGCCTTGGCCTTGCTATTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR TCA 90 bp ATCACTGTAGTGTTTAAGCAAGGAAACCAGCACCATGTTCTCATCATACTTGATAGAGGAGGAACTTGTTaGGGAGTACAGGGTTTTCAA +
Preference number: 4 (lower is better)
Translates to: ITVVFKQGNQHHVLIILDRGGTC*GVQGFQ
Trigger: TTGAAAACCCTGTACTCCTCAACAAGTTCCTCCTCT...ATCAAGTATGATGAGAACATGGTGCTGGTTTCCTTGCTTAAACACTACAGTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418682.5
CDS-3UTR TCA 90 bp GACAAAGATTATCATATGCACACTCTAGTGCTTCAATCTGTTTTAGTGAAAACCAAACCCACTGGCCCCTaGATGAGAGGTAAACTCTCT +
Preference number: 4 (lower is better)
Translates to: DKDYHMHTLVLQSVLVKTKPTGP*MRGKLS
Trigger: AGAGAGTTTACCTCTCATTCAGGGGCCAGTGGGTTT...GGTTTTCACTAAAACAGATTGAAGCACTAGAGTGTGCATATGATAATCTTTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000418682.5
CDS-3UTR TCA 90 bp ACTGATGACTCAGCTAACCTTTTAGGGTCCATACATTCACTGAGGTTCACCATCGTGACTCCTTCTGTTTaGCAAAGATTATCATATGCA +
Preference number: 4 (lower is better)
Translates to: TDDSANLLGSIHSLRFTIVTPSV*QRLSYA
Trigger: TGCATATGATAATCTTTGTCAAACAGAAGGAGTCAC...GATGGTGAACCTCAGTGAATGTATGGACCCTAAAAGGTTAGCTGAGTCATCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434066.6
CDS-3UTR TCA 90 bp GACACAACCTTGTCCAAGTCTAAAGTAGGAACCAATCTCCAACACATCAGTTTGTCCAACACATCAGTTTaGGATTTAGATCCACTGATG +
Preference number: 4 (lower is better)
Translates to: DTTLSKSKVGTNLQHISLSNTSV*DLDPLM
Trigger: CATCAGTGGATCTAAATCTCAAACTGATGTGTTGGA...CAAACTGATGTGTTGGAGATTGGTTCCTACTTTAGACTTGGACAAGGTTGTGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424071.5
ENST00000434066.6
CDS-3UTR TCA 90 bp ACCTTGGAAGAAATCACTGTAGTGTTTAAGCAAGGAAACCAGCACCATGTTCTCATATGTCAAAAGCACTaGACTCCAATGTTAAGCGAG +
Preference number: 4 (lower is better)
Translates to: TLEEITVVFKQGNQHHVLICQKH*TPMLSE
Trigger: CTCGCTTAACATTGGAGTTCAGTGCTTTTGACATAT...GAGAACATGGTGCTGGTTTCCTTGCTTAAACACTACAGTGATTTCTTCCAAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418682.5
CDS-3UTR CCA 90 bp TCAATAGCAAGGCCAAGGCCAAGGTTATTATTTAGCTCTGAACTGGTGGTATCTAAGACTCGAGTGTGTTaGTGTTATACAGTGTTCCAA +
Preference number: 4 (lower is better)
Translates to: SIARPRPRLLFSSELVVSKTRVC*CYTVFQ
Trigger: TTGGAACACTGTATAACACCAACACACTCGAGTCTT...AGATACCACCAGTTCAGAGCTAAATAATAACCTTGGCCTTGGCCTTGCTATTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354449.7
ENST00000354956.9
CDS-3UTR CCA 90 bp CATCATTGTTCATCTACCTTATGGAACAAAGCAGCCAAGAATCAGATGGGCGAGTGTTCATCTACCTTATaGAACAAAGCAGCCAAGAAT +
Preference number: 4 (lower is better)
Translates to: HHCSSTLWNKAAKNQMGECSSTL*NKAAKN
Trigger: ATTCTTGGCTGCTTTGTTCCATAAGGTAGATGAACA...CTCGCCCATCTGATTCTTGGCTGCTTTGTTCCATAAGGTAGATGAACAATGATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427759.5
CDS-3UTR TCA 90 bp TCAATAGCAAGGCCAAGGCCAAGGTTATTATTTAGCTCTGAACTGGTGGTATCTGTGACTCCTTCTGTTTaGCAAAGATTATCATATGCA +
Preference number: 4 (lower is better)
Translates to: SIARPRPRLLFSSELVVSVTPSV*QRLSYA
Trigger: TGCATATGATAATCTTTGTCAAACAGAAGGAGTCAC...AGATACCACCAGTTCAGAGCTAAATAATAACCTTGGCCTTGGCCTTGCTATTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354449.7
ENST00000354956.9
CDS-3UTR TCA 90 bp ACCTTGGAAGAAATCACTGTAGTGTTTAAGCAAGGAAACCAGCACCATGTTCTCGTGACTCCTTCTGTTTaGCAAAGATTATCATATGCA +
Preference number: 4 (lower is better)
Translates to: TLEEITVVFKQGNQHHVLVTPSV*QRLSYA
Trigger: TGCATATGATAATCTTTGTCAAACAGAAGGAGTCAC...GAGAACATGGTGCTGGTTTCCTTGCTTAAACACTACAGTGATTTCTTCCAAGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418682.5
CDS-3UTR GCA 90 bp ATCACTGTAGTGTTTAAGCAAGGAAACCAGCACCATGTTCTCATCATACTTGATGGTTTTCAAGAGCAGTaGCTGATTTTATGGATTCCC +
Preference number: 4 (lower is better)
Translates to: ITVVFKQGNQHHVLIILDGFQEQ*LILWIP
Trigger: GGGAATCCATAAAATCAGGCACTGCTCTTGAAAACC...ATCAAGTATGATGAGAACATGGTGCTGGTTTCCTTGCTTAAACACTACAGTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418682.5
CDS-3UTR GCA 90 bp GTAGGAACCAATCTCCAACACATCAGTTTGAGATTTAGATCCACTGATGACTCACTTTTCCCATCCAACTaGTTTAGGACAATCATCTGT +
Preference number: 4 (lower is better)
Translates to: VGTNLQHISLRFRSTDDSLFPSN*FRTIIC
Trigger: ACAGATGATTGTCCTAAAGCAGTTGGATGGGAAAAG...TGAGTCATCAGTGGATCTAAATCTCAAACTGATGTGTTGGAGATTGGTTCCTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434066.6
CDS-3UTR TCA 90 bp ATCACTGTAGTGTTTAAGCAAGGAAACCAGCACCATGTTCTCATCATACTTGATTTCAAGAGCAGTGCCTaGTTTTATGGATTCCCATAT +
Preference number: 4 (lower is better)
Translates to: ITVVFKQGNQHHVLIILDFKSSA*FYGFPY
Trigger: ATATGGGAATCCATAAAATCAGGCACTGCTCTTGAA...ATCAAGTATGATGAGAACATGGTGCTGGTTTCCTTGCTTAAACACTACAGTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418682.5
CDS-3UTR TCA 90 bp ACCTTGTCCAAGTCTAAAGTAGGAACCAATCTCCAACACATCAGTTTGAGATTTTCCAACACATCAGTTTaGGATTTAGATCCACTGATG +
Preference number: 4 (lower is better)
Translates to: TLSKSKVGTNLQHISLRFSNTSV*DLDPLM
Trigger: CATCAGTGGATCTAAATCTCAAACTGATGTGTTGGA...AAATCTCAAACTGATGTGTTGGAGATTGGTTCCTACTTTAGACTTGGACAAGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424071.5
ENST00000434066.6
CDS-3UTR GCA 90 bp AGTCCTAGATATACTTACTGCTGGTACAGTTGTACTCTAAGATTGGTATTTGATCTTTTCCCATCCAACTaGTTTAGGACAATCTGGGCT +
Preference number: 4 (lower is better)
Translates to: SPRYTYCWYSCTLRLVFDLFPSN*FRTIWA
Trigger: AGCCCAGATTGTCCTAAAGCAGTTGGATGGGAAAAG...ATCAAATACCAATCTTAGAGTACAACTGTACCAGCAGTAAGTATATCTAGGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354449.7
3UTR CAA 72 bp AAGTCTAAAGTAGGAACCAATCTCCAACACATCAGTTaGAGATTTAGATCCACTGATGACTCAGCTAACCTT +
Preference number: 4 (lower is better)
Translates to: KSKVGTNLQHIS*RFRSTDDSANL
Trigger: AAGGTTAGCTGAGTCATCAGTGGATCTAAATCTCAAACTGATGTGTTGGAGATTGGTTCCTACTTTAGACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424071.5
ENST00000434066.6
CDS-3UTR TCA 90 bp AGAATCAGATGGGCGAGGAATAAAAGATTCCATTCACAGAAGTGCTTGATTCTTCCTTCTCGTTCATATTaGTCAAGAACTTTGGAAGAA +
Preference number: 4 (lower is better)
Translates to: RIRWARNKRFHSQKCLILPSRSY*SRTLEE
Trigger: TTCTTCCAAAGTTCTTGATCAATATGAACGAGAAGG...AAGAATCAAGCACTTCTGTGAATGGAATCTTTTATTCCTCGCCCATCTGATTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427759.5
CDS-3UTR CCA 90 bp AGTCCTAGATATACTTACTGCTGGTACAGTTGTACTCTAAGATTGGTATTTGATGAACACTTTTCTATATaGGTGATTTTGAGACCATCG +
Preference number: 4 (lower is better)
Translates to: SPRYTYCWYSCTLRLVFDEHFSI*VILRPS
Trigger: CGATGGTCTCAAAATCACCCATATAGAAAAGTGTTC...ATCAAATACCAATCTTAGAGTACAACTGTACCAGCAGTAAGTATATCTAGGACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS TCA 90 bp CACAAGGCTGCTCGCCGCTCAACTTCCGGCAACCACAGCTCTCTCTaGGGCGCGCGCCCCGATGACGCAACGCGGTCCTGCCCGCGCTTG +
Preference number: 5 (lower is better)
Translates to: HKAARRSTSGNHSSL*GARPDDATRSCPRL
Trigger: CAAGCGCGGGCAGGACCGCGTTGCGTCATCGGGGCGCGCGCCTCAGAGAGAGCTGTGGTTGCCGGAAGTTGAGCGGCGAGCAGCCTTGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451513.5
CDS-3UTR CAA 90 bp CTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCAGCCCCAGCTGCTGCCAGAGCCTaGGGCTTACCACCCCCTAGG +
Preference number: 5 (lower is better)
Translates to: LLWRWRAPQQAAGEKSAPAAARA*GLPPPR
Trigger: CCTAGGGGGTGGTAAGCCCAAGGCTCTGGCAGCAGC...TGGGGCTGACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS TCA 90 bp AGGAATTGGATCCGCCGCTCAACTTCCGGCAACCACAGCTCTCTCTaGGGCGCGCGCCCCGATGACGCAACGCGGTCCTGCCCGCGCTTG +
Preference number: 5 (lower is better)
Translates to: RNWIRRSTSGNHSSL*GARPDDATRSCPRL
Trigger: CAAGCGCGGGCAGGACCGCGTTGCGTCATCGGGGCGCGCGCCTCAGAGAGAGCTGTGGTTGCCGGAAGTTGAGCGGCGGATCCAATTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435760.5
CDS-3UTR CAA 90 bp CAGCAGTCCTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTGCTGCTGCCAGAGCCTaGGGCTTACCACCCCCTAGG +
Preference number: 5 (lower is better)
Translates to: QQSCSGDGELLSRRPGRSAAARA*GLPPPR
Trigger: CCTAGGGGGTGGTAAGCCCAAGGCTCTGGCAGCAGC...ACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAGGACTGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS TCA 90 bp ATTATTTCTTGCCGCCGCTCAACTTCCGGCAACCACAGCTCTCTCTaGGGCGCGCGCCCCGATGACGCAACGCGGTCCTGCCCGCGCTTG +
Preference number: 5 (lower is better)
Translates to: IISCRRSTSGNHSSL*GARPDDATRSCPRL
Trigger: CAAGCGCGGGCAGGACCGCGTTGCGTCATCGGGGCGCGCGCCTCAGAGAGAGCTGTGGTTGCCGGAAGTTGAGCGGCGGCAAGAAATAAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451830.5
CDS-3UTR CAA 90 bp GCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCAGCCCCACACACATCTCTGCGGGCTaGCTCCAGAGTGACACTGGA +
Preference number: 5 (lower is better)
Translates to: ALAMESSSAGGRGEVSPTHISAG*LQSDTG
Trigger: TCCAGTGTCACTCTGGAGCAAGCCCGCAGAGATGTG...TGTGGGGCTGACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR CAA 90 bp GCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCAGCCCCACAATGCCACAGGGTGGTTaGGACACAAGTCCCCAGCTC +
Preference number: 5 (lower is better)
Translates to: ALAMESSSAGGRGEVSPTMPQGG*DTSPQL
Trigger: GAGCTGGGGACTTGTGTCCAAACCACCCTGTGGCAT...TGTGGGGCTGACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR CAA 90 bp CTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCAGCCCCAAACGTCCTAGCTACATaGCAACCCAAGGTGCCGGCT +
Preference number: 5 (lower is better)
Translates to: LLWRWRAPQQAAGEKSAPNVLAT*QPKVPA
Trigger: AGCCGGCACCTTGGGTTGCAATGTAGCTAGGACGTT...TGGGGCTGACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR CAA 90 bp CCTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCAGCCCCCAAGTCCCCAGCTCCTaGCTGCTTTGGTTTCTTCAG +
Preference number: 5 (lower is better)
Translates to: PALAMESSSAGGRGEVSPQVPSS*LLWFLQ
Trigger: CTGAAGAAACCAAAGCAGCAAGGAGCTGGGGACTTG...GGGGCTGACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR CAA 90 bp TGGGGTCAGCAGTCCTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGCAAGCCCAAGAGAGGTaGGAGGCTCATTCATCCGAT +
Preference number: 5 (lower is better)
Translates to: WGQQSCSGDGELLSRRPGQAQER*EAHSSD
Trigger: ATCGGATGAATGAGCCTCCAACCTCTCTTGGGCTTG...CCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAGGACTGCTGACCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR CAA 90 bp CCTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCAGCCCCCAAGCCCAAGAGAGGTaGGAGGCTCATTCATCCGAT +
Preference number: 5 (lower is better)
Translates to: PALAMESSSAGGRGEVSPQAQER*EAHSSD
Trigger: ATCGGATGAATGAGCCTCCAACCTCTCTTGGGCTTG...GGGGCTGACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS GCA 90 bp AGGGCTCCTGCAATCACGGCCAGTCCTGGACGACTCACAGTGCACTaGTGGTCCAAGGTCCGGTCTCTGGTTGAATCTCCTGGGGCCACC +
Preference number: 5 (lower is better)
Translates to: RAPAITASPGRLTVH*WSKVRSLVESPGAT
Trigger: GGTGGCCCCAGGAGATTCAACCAGAGACCGGACCTTGGACCAGCAGTGCACTGTGAGTCGTCCAGGACTGGCCGTGATTGCAGGAGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
ENST00000467121.1
CDS-3UTR CAA 90 bp CAGCAGTCCTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTAACGTCCTAGCTACATaGCAACCCAAGGTGCCGGCT +
Preference number: 5 (lower is better)
Translates to: QQSCSGDGELLSRRPGRSNVLAT*QPKVPA
Trigger: AGCCGGCACCTTGGGTTGCAATGTAGCTAGGACGTT...ACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAGGACTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR CAA 90 bp TCTCACGCCCCAACCCATCAACGTCCTAGCTACATTGCAACCCAAGGTGCCGGCGCTGCTGCCAGAGCCTaGGGCTTACCACCCCCTAGG +
Preference number: 5 (lower is better)
Translates to: SHAPTHQRPSYIATQGAGAAARA*GLPPPR
Trigger: CCTAGGGGGTGGTAAGCCCAAGGCTCTGGCAGCAGC...GCCGGCACCTTGGGTTGCAATGTAGCTAGGACGTTGATGGGTTGGGGCGTGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424071.5
CDS-3UTR CAA 90 bp CCTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCAGCCCCATGACCAGCTTTCTCTaGCTTGCAGCAATGACGGCA +
Preference number: 5 (lower is better)
Translates to: PALAMESSSAGGRGEVSPMTSFL*LAAMTA
Trigger: TGCCGTCATTGCTGCAAGCAAGAGAAAGCTGGTCAT...GGGGCTGACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR CAA 90 bp TGGGGTCAGCAGTCCTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGCCAGATCTCAGCAGCTaGGGTTTCTTGATGCAGCAA +
Preference number: 5 (lower is better)
Translates to: WGQQSCSGDGELLSRRPGPDLSS*GFLMQQ
Trigger: TTGCTGCATCAAGAAACCCAAGCTGCTGAGATCTGG...CCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAGGACTGCTGACCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354449.7
ENST00000354956.9
CDS-3UTR CAA 90 bp CCTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCAGCCCCGAGGAAAACCAGCTCTaGCCTGAGTTACCCATGGTA +
Preference number: 5 (lower is better)
Translates to: PALAMESSSAGGRGEVSPEENQL*PELPMV
Trigger: TACCATGGGTAACTCAGGCAAGAGCTGGTTTTCCTC...GGGGCTGACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR CAA 90 bp AGGGGCTCCGTGAAGTTCTTCCCAGAGCCGCGCTGCCTGCAGTGCGCTCTGACCCTGGGACAGGTCTCTTaGTCAGTGAACAAGGGCGTC +
Preference number: 5 (lower is better)
Translates to: RGSVKFFPEPRCLQCALTLGQVS*SVNKGV
Trigger: GACGCCCTTGTTCACTGACAAAGAGACCTGTCCCAG...GGTCAGAGCGCACTGCAGGCAGCGCGGCTCTGGGAAGAACTTCACGGAGCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR CAA 90 bp GGGGCCCAGAATCACCAGGCCTGGGGTCAGCAGTCCTGCTCTGGCGATGGAGAGCTCACCTGCAAGGCTTaGTGGACTCTGCACACCGTA +
Preference number: 5 (lower is better)
Translates to: GAQNHQAWGQQSCSGDGELTCKA*WTLHTV
Trigger: TACGGTGTGCAGAGTCCACAAAGCCTTGCAGGTGAG...CTCTCCATCGCCAGAGCAGGACTGCTGACCCCAGGCCTGGTGATTCTGGGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS TCA 90 bp ATCAGCACGAGCTTCCAAGTCAGAAGACCCCGGACTGAACCAGTCTaGGGGGACGCGGCTACAGACGAAGGGCGCCAGCCGGAATCAGTG +
Preference number: 5 (lower is better)
Translates to: ISTSFQVRRPRTEPV*GDAATDEGRQPESV
Trigger: CACTGATTCCGGCTGGCGCCCTTCGTCTGTAGCCGCGTCCCCTCAGACTGGTTCAGTCCGGGGTCTTCTGACTTGGAAGCTCGTGCTGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000419112.5
ENST00000469654.2
CDS CCA 90 bp GCTCCTGCAATCACGGCCAGTCCTGGACGACTCACAGTGCACTGCTaGTCCAAGGTCCGGTCTCTGGTTGAATCTCCTGGGGCCACCACA +
Preference number: 5 (lower is better)
Translates to: APAITASPGRLTVHC*SKVRSLVESPGATT
Trigger: TGTGGTGGCCCCAGGAGATTCAACCAGAGACCGGACCTTGGACCAGCAGTGCACTGTGAGTCGTCCAGGACTGGCCGTGATTGCAGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
ENST00000467121.1
CDS-3UTR CAA 90 bp GCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCAGCCCCACACCAAGCAGCAGACATTaGACAGACACAACCTTGTCC +
Preference number: 5 (lower is better)
Translates to: ALAMESSSAGGRGEVSPTPSSRH*TDTTLS
Trigger: GGACAAGGTTGTGTCTGTCAAATGTCTGCTGCTTGG...TGTGGGGCTGACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR CAA 90 bp AGCAGTCCTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCCAAGTCCCCAGCTCCTaGCTGCTTTGGTTTCTTCAG +
Preference number: 5 (lower is better)
Translates to: SSPALAMESSSAGGRGEVQVPSS*LLWFLQ
Trigger: CTGAAGAAACCAAAGCAGCAAGGAGCTGGGGACTTG...GACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAGGACTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR CAA 90 bp TGCTGGCGGCCGGGTCCCTGGTGCACTGACCTATCTGGGATAGGCAGTACCCTGCTGGGCAGGAGCTGGTaGCTCATTTCCCCATTTGGT +
Preference number: 5 (lower is better)
Translates to: CWRPGPWCTDLSGIGSTLLGRSW*LISPFG
Trigger: ACCAAATGGGGAAATGAGCAACCAGCTCCTGCCCAG...CAGGGTACTGCCTATCCCAGATAGGTCAGTGCACCAGGGACCCGGCCGCCAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR CAA 90 bp AGGGGCCCAGAATCACCAGGCCTGGGGTCAGCAGTCCTGCTCTGGCGATGGAGACAGCTCACTCAGTCCTaGGTGGAAATCTGGCGTCAC +
Preference number: 5 (lower is better)
Translates to: RGPESPGLGSAVLLWRWRQLTQS*VEIWRH
Trigger: GTGACGCCAGATTTCCACCAAGGACTGAGTGAGCTG...TCTCCATCGCCAGAGCAGGACTGCTGACCCCAGGCCTGGTGATTCTGGGCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR CAA 90 bp AGTCCTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCAGCCTTGGACTGGCTACTTaGGGAGAAGCGAAGCCTCAT +
Preference number: 5 (lower is better)
Translates to: SPALAMESSSAGGRGEVSLGLAT*GEAKPH
Trigger: ATGAGGCTTCGCTTCTCCCAAAGTAGCCAGTCCAAG...GCTGACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAGGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR CAA 90 bp TGCTGGCGGCCGGGTCCCTGGTGCACTGACCTATCTGGGATAGGCAGTACCCTGCAGGGGAGGTGGGGTTaGTGTCTTCCAACTTCCCTA +
Preference number: 5 (lower is better)
Translates to: CWRPGPWCTDLSGIGSTLQGRWG*CLPTSL
Trigger: TAGGGAAGTTGGAAGACACAAACCCCACCTCCCCTG...CAGGGTACTGCCTATCCCAGATAGGTCAGTGCACCAGGGACCCGGCCGCCAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS TCA 90 bp GACTTAGGAAATCAGCACGAGCTTCCAAGTCAGAAGACCCCGGACTaGACCAGTCTGAGGGGACGCGGCTACAGACGAAGGGCGCCAGCC +
Preference number: 5 (lower is better)
Translates to: DLGNQHELPSQKTPD*TSLRGRGYRRRAPA
Trigger: GGCTGGCGCCCTTCGTCTGTAGCCGCGTCCCCTCAGACTGGTTCAGTCCGGGGTCTTCTGACTTGGAAGCTCGTGCTGATTTCCTAAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419112.5
ENST00000469654.2
CDS CCA 90 bp TACCATCAATTCCACGGCCAGGGCTCCTGCAATCACGGCCAGTCCTaGACGACTCACAGTGCACTGCTGGTCCAAGGTCCGGTCTCTGGT +
Preference number: 5 (lower is better)
Translates to: YHQFHGQGSCNHGQS*TTHSALLVQGPVSG
Trigger: ACCAGAGACCGGACCTTGGACCAGCAGTGCACTGTGAGTCGTCCAGGACTGGCCGTGATTGCAGGAGCCCTGGCCGTGGAATTGATGGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
ENST00000467121.1
CDS-3UTR CAA 90 bp CTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCAGCCCCACAGCGAAGAGGAGGAACTTGTaGAGGAGTACAGGGTTTTCA +
Preference number: 5 (lower is better)
Translates to: LAMESSSAGGRGEVSPTAKRRNL*RSTGFS
Trigger: TGAAAACCCTGTACTCCTCAACAAGTTCCTCCTCTT...CGCTGTGGGGCTGACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR CAA 90 bp CTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCAGCCCCACAGCGCTTCGTCCTTTGACCTaGGAAGAAATCACTGTAGTG +
Preference number: 5 (lower is better)
Translates to: LAMESSSAGGRGEVSPTALRPLT*EEITVV
Trigger: CACTACAGTGATTTCTTCCAAGGTCAAAGGACGAAG...CGCTGTGGGGCTGACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR CAA 90 bp TGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCAGCCCCACAGCGGAATCCCAAAGCAGCATaGATGACCAGCTTTCTCTTG +
Preference number: 5 (lower is better)
Translates to: WRWRAPQQAAGEKSAPQRNPKAA*MTSFLL
Trigger: CAAGAGAAAGCTGGTCATCAATGCTGCTTTGGGATT...CCGCTGTGGGGCTGACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR CAA 90 bp TGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCAGCCCCACAGCGGTCCTTCTCGTTCATATaGATCAAGAACCTGGTGAGG +
Preference number: 5 (lower is better)
Translates to: WRWRAPQQAAGEKSAPQRSFSFI*IKNLVR
Trigger: CCTCACCAGGTTCTTGATCAATATGAACGAGAAGGA...CCGCTGTGGGGCTGACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354956.9
CDS-3UTR CAA 90 bp AGCCTGCGGTGCGGTGGGCAGCACATTCCGGGGATGAGGGTGCCACCTCCCGCACACAGCTGCTCCTTTTaGGTCAATGAGCGTTTCTAT +
Preference number: 5 (lower is better)
Translates to: SLRCGGQHIPGMRVPPPAHSCSF*VNERFY
Trigger: ATAGAAACGCTCATTGACCAAAAAGGAGCAGCTGTG...TGCGGGAGGTGGCACCCTCATCCCCGGAATGTGCTGCCCACCGCACCGCAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR CAA 90 bp CTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCAGCCCCACAGCGAAAGACTCGAGTGTGTaGGTGTTATACAGTGTTCCA +
Preference number: 5 (lower is better)
Translates to: LAMESSSAGGRGEVSPTAKDSSV*VLYSVP
Trigger: TGGAACACTGTATAACACCAACACACTCGAGTCTTT...CGCTGTGGGGCTGACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR CAA 90 bp TGGGGTCAGCAGTCCTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGTTGACAGACACAACCTaGTCCAAGTCTAAAGTAGGA +
Preference number: 5 (lower is better)
Translates to: WGQQSCSGDGELLSRRPGLTDTT*SKSKVG
Trigger: TCCTACTTTAGACTTGGACAAGGTTGTGTCTGTCAA...CCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAGGACTGCTGACCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR CAA 90 bp GCAGGCCCTCGCGATGAGCAGTGGGTCAGCTGCGGTGTGGGATGCTGGAGTTTGCCAAGCAGCAGACATTaGACAGACACAACCTTGTCC +
Preference number: 5 (lower is better)
Translates to: AGPRDEQWVSCGVGCWSLPSSRH*TDTTLS
Trigger: GGACAAGGTTGTGTCTGTCAAATGTCTGCTGCTTGG...CAAACTCCAGCATCCCACACCGCAGCTGACCCACTGCTCATCGCGAGGGCCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR CAA 90 bp GTCAGCAGTCCTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGAACAAGCTGTACATTaGTCAAATGCCAGGCTGACG +
Preference number: 5 (lower is better)
Translates to: VSSPALAMESSSAGGRGEEQAVH*SNARLT
Trigger: CGTCAGCCTGGCATTTGACAAATGTACAGCTTGTTC...TTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAGGACTGCTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354449.7
ENST00000446450.6
CDS-3UTR CAA 90 bp GGGGCCCAGAATCACCAGGCCTGGGGTCAGCAGTCCTGCTCTGGCGATGGAGAGGAACAAGCTGTACATTaGTCAAATGCCAGGCTGACG +
Preference number: 5 (lower is better)
Translates to: GAQNHQAWGQQSCSGDGEEQAVH*SNARLT
Trigger: CGTCAGCCTGGCATTTGACAAATGTACAGCTTGTTC...CTCTCCATCGCCAGAGCAGGACTGCTGACCCCAGGCCTGGTGATTCTGGGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354449.7
ENST00000446450.6
CDS-3UTR CAA 90 bp GGCAGAAAGCCATGTCTGAGCAGCTCACTCAGTCCTTGGTGGAAATCTGGCGTCCCCATTTGGTCTGTGTaGGGTCACCCCCTCAGGGCC +
Preference number: 5 (lower is better)
Translates to: GRKPCLSSSLSPWWKSGVPIWSV*GHPLRA
Trigger: GGCCCTGAGGGGGTGACCCAACACAGACCAAATGGG...GACGCCAGATTTCCACCAAGGACTGAGTGAGCTGCTCAGACATGGCTTTCTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR CAA 90 bp CCTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCAGCCCCTCTATATGGGTGATTTaGAGACCATCGTTACGCTGT +
Preference number: 5 (lower is better)
Translates to: PALAMESSSAGGRGEVSPSIWVI*RPSLRC
Trigger: ACAGCGTAACGATGGTCTCAAAATCACCCATATAGA...GGGGCTGACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR CAA 90 bp TGGGGTCAGCAGTCCTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGACTCTAGTGCTTCAATaGCAAATGTCAAGAGGAGGA +
Preference number: 5 (lower is better)
Translates to: WGQQSCSGDGELLSRRPGTLVLQ*QMSRGG
Trigger: TCCTCCTCTTGACATTTGCAATTGAAGCACTAGAGT...CCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAGGACTGCTGACCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446450.6
CDS-3UTR CAA 90 bp TGGGGTCAGCAGTCCTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGTATCTCATTTGCTGCTaGTTCCAAAAGGAGCTTCTT +
Preference number: 5 (lower is better)
Translates to: WGQQSCSGDGELLSRRPGYLICC*FQKELL
Trigger: AAGAAGCTCCTTTTGGAACAAGCAGCAAATGAGATA...CCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAGGACTGCTGACCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR CAA 90 bp CCTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCAGCCCCATTCCCATATCTCATTaGCTGCTTGTTCCAAAAGGA +
Preference number: 5 (lower is better)
Translates to: PALAMESSSAGGRGEVSPIPISH*LLVPKG
Trigger: TCCTTTTGGAACAAGCAGCAAATGAGATATGGGAAT...GGGGCTGACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR CAA 90 bp TGGGGTCAGCAGTCCTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGATTCCCATATCTCATTaGCTGCTTGTTCCAAAAGGA +
Preference number: 5 (lower is better)
Translates to: WGQQSCSGDGELLSRRPGIPISH*LLVPKG
Trigger: TCCTTTTGGAACAAGCAGCAAATGAGATATGGGAAT...CCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAGGACTGCTGACCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR CAA 90 bp CAGCAGTCCTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTAAGAGGAGGAACTTGTaGAGGAGTACAGGGTTTTCA +
Preference number: 5 (lower is better)
Translates to: QQSCSGDGELLSRRPGRSKRRNL*RSTGFS
Trigger: TGAAAACCCTGTACTCCTCAACAAGTTCCTCCTCTT...ACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAGGACTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR CAA 90 bp AGTCCTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCAGCCTTCGTCCTTTGACCTaGGAAGAAATCACTGTAGTG +
Preference number: 5 (lower is better)
Translates to: SPALAMESSSAGGRGEVSLRPLT*EEITVV
Trigger: CACTACAGTGATTTCTTCCAAGGTCAAAGGACGAAG...GCTGACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAGGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR CAA 90 bp CTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCAGCCCCACAGCGCTCCAACACATCAGTTaGAGATTTAGATCCACTGAT +
Preference number: 5 (lower is better)
Translates to: LAMESSSAGGRGEVSPTALQHIS*RFRSTD
Trigger: ATCAGTGGATCTAAATCTCAAACTGATGTGTTGGAG...CGCTGTGGGGCTGACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR CAA 90 bp CTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCAGCCCCATTGACAGACACAACCTaGTCCAAGTCTAAAGTAGGA +
Preference number: 5 (lower is better)
Translates to: LLWRWRAPQQAAGEKSAPLTDTT*SKSKVG
Trigger: TCCTACTTTAGACTTGGACAAGGTTGTGTCTGTCAA...TGGGGCTGACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR CAA 90 bp ATCTTGAATCCCGAGCAACGCCGAACACTGGCCACTCCTGGGCAGCAGAGGGGGATGACCAGCTTTCTCTaGCTTGCAGCAATGACGGCA +
Preference number: 5 (lower is better)
Translates to: ILNPEQRRTLATPGQQRGMTSFL*LAAMTA
Trigger: TGCCGTCATTGCTGCAAGCAAGAGAAAGCTGGTCAT...CCCCCTCTGCTGCCCAGGAGTGGCCAGTGTTCGGCGTTGCTCGGGATTCAAGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354449.7
ENST00000354956.9
CDS-3UTR CAA 90 bp GTCAGCAGTCCTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAAATCCCAAAGCAGCATaGATGACCAGCTTTCTCTTG +
Preference number: 5 (lower is better)
Translates to: VSSPALAMESSSAGGRGENPKAA*MTSFLL
Trigger: CAAGAGAAAGCTGGTCATCAATGCTGCTTTGGGATT...TTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAGGACTGCTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR CAA 90 bp TGGTATCTTGAATCCCGAGCAACGCCGAACACTGGCCACTCCTGGGCAGCAGAGGCATCCCTGTCTGCTTaGTTACAAGCTCCCAGGGGA +
Preference number: 5 (lower is better)
Translates to: WYLESRATPNTGHSWAAEASLSA*LQAPRG
Trigger: TCCCCTGGGAGCTTGTAACAAAGCAGACAGGGATGC...CTCTGCTGCCCAGGAGTGGCCAGTGTTCGGCGTTGCTCGGGATTCAAGATACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS GCA 90 bp TGGATGCTGCAAAACAGATACCATCAATTCCACGGCCAGGGCTCCTaGAATCACGGCCAGTCCTGGACGACTCACAGTGCACTGCTGGTC +
Preference number: 5 (lower is better)
Translates to: WMLQNRYHQFHGQGS*NHGQSWTTHSALLV
Trigger: GACCAGCAGTGCACTGTGAGTCGTCCAGGACTGGCCGTGATTGCAGGAGCCCTGGCCGTGGAATTGATGGTATCTGTTTTGCAGCATCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
ENST00000467121.1
CDS-3UTR CAA 90 bp GTCAGCAGTCCTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAATTCTTATCTGCAGTCTaGAAAGACTCGAGTGTGTTG +
Preference number: 5 (lower is better)
Translates to: VSSPALAMESSSAGGRGEFLSAV*KDSSVL
Trigger: CAACACACTCGAGTCTTTCAAGACTGCAGATAAGAA...TTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAGGACTGCTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR CAA 90 bp AGGGGCCCAGAATCACCAGGCCTGGGGTCAGCAGTCCTGCTCTGGCGATGGAGAAAGAGGAGGAACTTGTaGAGGAGTACAGGGTTTTCA +
Preference number: 5 (lower is better)
Translates to: RGPESPGLGSAVLLWRWRKRRNL*RSTGFS
Trigger: TGAAAACCCTGTACTCCTCAACAAGTTCCTCCTCTT...TCTCCATCGCCAGAGCAGGACTGCTGACCCCAGGCCTGGTGATTCTGGGCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR CAA 90 bp CTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCAGCCCCATGTTATCTTCGTCCTTaGACCTTGGAAGAAATCACT +
Preference number: 5 (lower is better)
Translates to: LLWRWRAPQQAAGEKSAPCYLRP*TLEEIT
Trigger: AGTGATTTCTTCCAAGGTCAAAGGACGAAGATAACA...TGGGGCTGACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR CAA 90 bp GGGGCCCAGAATCACCAGGCCTGGGGTCAGCAGTCCTGCTCTGGCGATGGAGAGTTGACAGACACAACCTaGTCCAAGTCTAAAGTAGGA +
Preference number: 5 (lower is better)
Translates to: GAQNHQAWGQQSCSGDGELTDTT*SKSKVG
Trigger: TCCTACTTTAGACTTGGACAAGGTTGTGTCTGTCAA...CTCTCCATCGCCAGAGCAGGACTGCTGACCCCAGGCCTGGTGATTCTGGGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR CAA 90 bp GTCAGCAGTCCTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAATAGGTATGCTCATGTaGAATCCTCTGGCATTCACA +
Preference number: 5 (lower is better)
Translates to: VSSPALAMESSSAGGRGEIGMLM*NPLAFT
Trigger: TGTGAATGCCAGAGGATTCAACATGAGCATACCTAT...TTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAGGACTGCTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR CAA 90 bp GGCAGAAAGCCATGTCTGAGCAGCTCACTCAGTCCTTGGTGGAAATCTGGCGTCCACATCTCTGCGGGCTaGCTCCAGAGTGACACTGGA +
Preference number: 5 (lower is better)
Translates to: GRKPCLSSSLSPWWKSGVHISAG*LQSDTG
Trigger: TCCAGTGTCACTCTGGAGCAAGCCCGCAGAGATGTG...GACGCCAGATTTCCACCAAGGACTGAGTGAGCTGCTCAGACATGGCTTTCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR CAA 90 bp TGGTATCTTGAATCCCGAGCAACGCCGAACACTGGCCACTCCTGGGCAGCAGAGCTGGGCTTCCAAGCTTaGGCATTCAGGCCCCTATAT +
Preference number: 5 (lower is better)
Translates to: WYLESRATPNTGHSWAAELGFQA*AFRPLY
Trigger: ATATAGGGGCCTGAATGCCAAAGCTTGGAAGCCCAG...CTCTGCTGCCCAGGAGTGGCCAGTGTTCGGCGTTGCTCGGGATTCAAGATACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR CAA 90 bp GTCAGCAGTCCTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTTGAATTTTGGAAATaGGCACTGGGTGAAAAGGTC +
Preference number: 5 (lower is better)
Translates to: VSSPALAMESSSAGGRGEVEFWK*ALGEKV
Trigger: GACCTTTTCACCCAGTGCCAATTTCCAAAATTCAAC...TTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAGGACTGCTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR CAA 90 bp GGGGCCCAGAATCACCAGGCCTGGGGTCAGCAGTCCTGCTCTGGCGATGGAGAGCTCATGTCCCAGATTTaGGAAGAACAAGCTGTACAT +
Preference number: 5 (lower is better)
Translates to: GAQNHQAWGQQSCSGDGELMSQI*EEQAVH
Trigger: ATGTACAGCTTGTTCTTCCAAAATCTGGGACATGAG...CTCTCCATCGCCAGAGCAGGACTGCTGACCCCAGGCCTGGTGATTCTGGGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446450.6
CDS GCA 90 bp GCACAAGCCCAAGAGAGGTTGGAGGCTCATTCATCCGATCGTCACTaGTGCTGGCAATGGCATAGCCCCCTTCTGGATGCTGCAAAACAG +
Preference number: 5 (lower is better)
Translates to: AQAQERLEAHSSDRH*CWQWHSPLLDAAKQ
Trigger: CTGTTTTGCAGCATCCAGAAGGGGGCTATGCCATTGCCAGCAGCAGTGACGATCGGATGAATGAGCCTCCAACCTCTCTTGGGCTTGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR CAA 90 bp AGGGGCCCAGAATCACCAGGCCTGGGGTCAGCAGTCCTGCTCTGGCGATGGAGAAAAGACTCGAGTGTGTaGGTGTTATACAGTGTTCCA +
Preference number: 5 (lower is better)
Translates to: RGPESPGLGSAVLLWRWRKDSSV*VLYSVP
Trigger: TGGAACACTGTATAACACCAACACACTCGAGTCTTT...TCTCCATCGCCAGAGCAGGACTGCTGACCCCAGGCCTGGTGATTCTGGGCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR CAA 90 bp GTCAGCAGTCCTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAATTCCCATATCTCATTaGCTGCTTGTTCCAAAAGGA +
Preference number: 5 (lower is better)
Translates to: VSSPALAMESSSAGGRGEIPISH*LLVPKG
Trigger: TCCTTTTGGAACAAGCAGCAAATGAGATATGGGAAT...TTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAGGACTGCTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR CAA 90 bp CAGCAGTCCTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTTGTTATCTTCGTCCTTaGACCTTGGAAGAAATCACT +
Preference number: 5 (lower is better)
Translates to: QQSCSGDGELLSRRPGRSCYLRP*TLEEIT
Trigger: AGTGATTTCTTCCAAGGTCAAAGGACGAAGATAACA...ACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAGGACTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR CAA 90 bp CTGCTCTGGCGATGGAGAGCTCCTCAGCAGGCGGCCGGGGAGAAGTCAGCCCCATCCTTCTCGTTCATATaGATCAAGAACTTTGGAAGA +
Preference number: 5 (lower is better)
Translates to: LLWRWRAPQQAAGEKSAPSFSFI*IKNFGR
Trigger: TCTTCCAAAGTTCTTGATCAATATGAACGAGAAGGA...TGGGGCTGACTTCTCCCCGGCCGCCTGCTGAGGAGCTCTCCATCGCCAGAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR CAA 90 bp GGACAACACGATGTCTCTCATACCTCCCCAGCCCCAATAACCATCACTCATGGCCACCTTGACTGTGCCTaGGTTCCAGGCCCAAGTAGC +
Preference number: 5 (lower is better)
Translates to: GQHDVSHTSPAPITITHGHLDCA*VPGPSS
Trigger: GCTACTTGGGCCTGGAACCAAGGCACAGTCAAGGTG...GCCATGAGTGATGGTTATTGGGGCTGGGGAGGTATGAGAGACATCGTGTTGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414717.5
CDS CCA 90 bp GGGCTAAATGCCATTTCTGGAAGCTTCACTTCGAAGATGATGCTGTaGGCAACGTCTCTCGCCCCCTGCATGGTACGGTCACGGAAGCAA +
Preference number: 5 (lower is better)
Translates to: GLNAISGSFTSKMML*ATSLAPCMVRSRKQ
Trigger: TTGCTTCCGTGACCGTACCATGCAGGGGGCGAGAGACGTTGCCCACAGCATCATCTTCGAAGTGAAGCTTCCAGAAATGGCATTTAGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
ENST00000461278.1
ENST00000478638.5
CDS CCA 90 bp TTGGCAAAAAGCGATGAGCCCAGGAGGTCAGCAGATGCCACAGGGTaGTTTGGACACAAGTCCCCAGCTCCTTGCTGCTTTGGTTTCTTC +
Preference number: 5 (lower is better)
Translates to: LAKSDEPRRSADATG*FGHKSPAPCCFGFF
Trigger: GAAGAAACCAAAGCAGCAAGGAGCTGGGGACTTGTGTCCAAACCACCCTGTGGCATCTGCTGACCTCCTGGGCTCATCGCTTTTTGCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
ENST00000467121.1
CDS-3UTR CAA 90 bp AGGGGCCCAGAATCACCAGGCCTGGGGTCAGCAGTCCTGCTCTGGCGATGGAGATATCTCATTTGCTGCTaGTTCCAAAAGGAGCTTCTT +
Preference number: 5 (lower is better)
Translates to: RGPESPGLGSAVLLWRWRYLICC*FQKELL
Trigger: AAGAAGCTCCTTTTGGAACAAGCAGCAAATGAGATA...TCTCCATCGCCAGAGCAGGACTGCTGACCCCAGGCCTGGTGATTCTGGGCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR CAA 90 bp TATCTTGAATCCCGAGCAACGCCGAACACTGGCCACTCCTGGGCAGCAGAGGGGCTTCGTCCTTTGACCTaGGAAGAAATCACTGTAGTG +
Preference number: 5 (lower is better)
Translates to: YLESRATPNTGHSWAAEGLRPLT*EEITVV
Trigger: CACTACAGTGATTTCTTCCAAGGTCAAAGGACGAAG...CCCCTCTGCTGCCCAGGAGTGGCCAGTGTTCGGCGTTGCTCGGGATTCAAGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354449.7
ENST00000354956.9
CDS-3UTR CAA 90 bp AGGGGCTCCGTGAAGTTCTTCCCAGAGCCGCGCTGCCTGCAGTGCGCTCTGACCGATCATATACACCAATaGTTATCTTCGTCCTTTGAC +
Preference number: 5 (lower is better)
Translates to: RGSVKFFPEPRCLQCALTDHIHQ*LSSSFD
Trigger: GTCAAAGGACGAAGATAACAATTGGTGTATATGATC...GGTCAGAGCGCACTGCAGGCAGCGCGGCTCTGGGAAGAACTTCACGGAGCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR CAA 90 bp GCTCTGAACTGGTGGTATCTTGAATCCCGAGCAACGCCGAACACTGGCCACTCCCCAAGCAGCAGACATTaGACAGACACAACCTTGTCC +
Preference number: 5 (lower is better)
Translates to: ALNWWYLESRATPNTGHSPSSRH*TDTTLS
Trigger: GGACAAGGTTGTGTCTGTCAAATGTCTGCTGCTTGG...GGAGTGGCCAGTGTTCGGCGTTGCTCGGGATTCAAGATACCACCAGTTCAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354449.7
ENST00000354956.9
CDS-3UTR CAA 90 bp TGCTGGCGGCCGGGTCCCTGGTGCACTGACCTATCTGGGATAGGCAGTACCCTGGAAGCGAAGCCTCATTaGAAATCTACCCTACTAAAT +
Preference number: 5 (lower is better)
Translates to: CWRPGPWCTDLSGIGSTLEAKPH*KSTLLN
Trigger: ATTTAGTAGGGTAGATTTCAAATGAGGCTTCGCTTC...CAGGGTACTGCCTATCCCAGATAGGTCAGTGCACCAGGGACCCGGCCGCCAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR CAA 90 bp CTTAAACCACATAGTGTACGTGTGCAGTTTCAGCGCCAGGCTGGGTGGGCGGACGCCACGAGTTTGTTATaGCTACAGGCTACTGAGCGT +
Preference number: 5 (lower is better)
Translates to: LKPHSVRVQFQRQAGWADATSLL*LQATER
Trigger: ACGCTCAGTAGCCTGTAGCAATAACAAACTCGTGGC...GTCCGCCCACCCAGCCTGGCGCTGAAACTGCACACGTACACTATGTGGTTTAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS TCA 90 bp TCGCACACAGCTTCACATGCCCACAGGGAACGATGTCAAAAGCACTaGACTCCAATGTTAAGCGAGCTGGCAGCCCAGCAGAGTCACCAT +
Preference number: 5 (lower is better)
Translates to: SHTASHAHRERCQKH*TPMLSELAAQQSHH
Trigger: ATGGTGACTCTGCTGGGCTGCCAGCTCGCTTAACATTGGAGTTCAGTGCTTTTGACATCGTTCCCTGTGGGCATGTGAAGCTGTGTGCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460444.5
ENST00000469654.2
CDS CCA 90 bp CCACATCATTGCAGAAGTAGCAGCCAAGCTTGTAACCAGGGATGTTaGCAAAAAGCGATGAGCCCAGGAGGTCAGCAGATGCCACAGGGT +
Preference number: 5 (lower is better)
Translates to: PHHCRSSSQACNQGC*QKAMSPGGQQMPQG
Trigger: ACCCTGTGGCATCTGCTGACCTCCTGGGCTCATCGCTTTTTGCCAACATCCCTGGTTACAAGCTTGGCTGCTACTTCTGCAATGATGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
ENST00000467121.1
CDS CCA 90 bp CAGGTTCCCCTGATAGAGTTCTGTATGGCAGCAAGGAGAGGCACATaGGGCAGAGTAGATGGACCATGCCATAAAAGCAGGCAAAGGCCA +
Preference number: 5 (lower is better)
Translates to: QVPLIEFCMAARRGT*GRVDGPCHKSRQRP
Trigger: TGGCCTTTGCCTGCTTTTATGGCATGGTCCATCTACTCTGCCCCATGTGCCTCTCCTTGCTGCCATACAGAACTCTATCAGGGGAACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423116.1
CDS-3UTR CAA 90 bp TATCTTGAATCCCGAGCAACGCCGAACACTGGCCACTCCTGGGCAGCAGAGGGGTTCTTATCTGCAGTCTaGAAAGACTCGAGTGTGTTG +
Preference number: 5 (lower is better)
Translates to: YLESRATPNTGHSWAAEGFLSAV*KDSSVL
Trigger: CAACACACTCGAGTCTTTCAAGACTGCAGATAAGAA...CCCCTCTGCTGCCCAGGAGTGGCCAGTGTTCGGCGTTGCTCGGGATTCAAGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354449.7
ENST00000354956.9
CDS-3UTR CAA 90 bp CTCTGGCATTCACACCGGGGAATATTTTCTGGAGCCGGTCCGCTGCTGCCAGAGAAGAGGAGGAACTTGTaGAGGAGTACAGGGTTTTCA +
Preference number: 5 (lower is better)
Translates to: LWHSHRGIFSGAGPLLPEKRRNL*RSTGFS
Trigger: TGAAAACCCTGTACTCCTCAACAAGTTCCTCCTCTT...CTCTGGCAGCAGCGGACCGGCTCCAGAAAATATTCCCCGGTGTGAATGCCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000424071.5
CDS-3UTR CAA 90 bp AGGGGCCCAGAATCACCAGGCCTGGGGTCAGCAGTCCTGCTCTGGCGATGGAGAGATCATATACACCAATaGTTATCTTCGTCCTTTGAC +
Preference number: 5 (lower is better)
Translates to: RGPESPGLGSAVLLWRWRDHIHQ*LSSSFD
Trigger: GTCAAAGGACGAAGATAACAATTGGTGTATATGATC...TCTCCATCGCCAGAGCAGGACTGCTGACCCCAGGCCTGGTGATTCTGGGCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS-3UTR CAA 90 bp ATCATGGCTTTCGATGAGCTGCTCCAGTTGCTCCACATCTCTGCGGGCTTGCTCCCAAGCAGCAGACATTaGACAGACACAACCTTGTCC +
Preference number: 5 (lower is better)
Translates to: IMAFDELLQLLHISAGLLPSSRH*TDTTLS
Trigger: GGACAAGGTTGTGTCTGTCAAATGTCTGCTGCTTGG...GAGCAAGCCCGCAGAGATGTGGAGCAACTGGAGCAGCTCATCGAAAGCCATGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424071.5
CDS-3UTR CAA 90 bp ATTGCAACCCAAGGTGCCGGCTCCAAGCAGCAGACATTTGACAGACACAACCTTAACGTCCTAGCTACATaGCAACCCAAGGTGCCGGCT +
Preference number: 5 (lower is better)
Translates to: IATQGAGSKQQTFDRHNLNVLAT*QPKVPA
Trigger: AGCCGGCACCTTGGGTTGCAATGTAGCTAGGACGTT...AAGGTTGTGTCTGTCAAATGTCTGCTGCTTGGAGCCGGCACCTTGGGTTGCAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424071.5
ENST00000434066.6
CDS-3UTR CAA 90 bp CTTGCCCCGCACACATTTCACTCCCACTGTACTGGGCTTCCAAGCTTTGGCATTCAAGTCCCCAGCTCCTaGCTGCTTTGGTTTCTTCAG +
Preference number: 5 (lower is better)
Translates to: LAPHTFHSHCTGLPSFGIQVPSS*LLWFLQ
Trigger: CTGAAGAAACCAAAGCAGCAAGGAGCTGGGGACTTG...AATGCCAAAGCTTGGAAGCCCAGTACAGTGGGAGTGAAATGTGTGCGGGGCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR CAA 90 bp ACACGATGTCTCTCATACCTCCCCAGCCCCAATAACCATCACTCATGGCCCAGTCAAGCCCAAGAGAGGTaGGAGGCTCATTCATCCGAT +
Preference number: 5 (lower is better)
Translates to: TRCLSYLPSPNNHHSWPSQAQER*EAHSSD
Trigger: ATCGGATGAATGAGCCTCCAACCTCTCTTGGGCTTG...ACTGGGCCATGAGTGATGGTTATTGGGGCTGGGGAGGTATGAGAGACATCGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414717.5
CDS GCA 90 bp AGCTTCACTTCGAAGATGATGCTGTGGGCAACGTCTCTCGCCCCCTaGATGGTACGGTCACGGAAGCAAACAACTTCAACAGACTGGAAA +
Preference number: 5 (lower is better)
Translates to: SFTSKMMLWATSLAP*MVRSRKQTTSTDWK
Trigger: TTTCCAGTCTGTTGAAGTTGTTTGCTTCCGTGACCGTACCATGCAGGGGGCGAGAGACGTTGCCCACAGCATCATCTTCGAAGTGAAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
ENST00000461278.1
ENST00000478638.5
CDS GCA 90 bp CCAAGGTCCGGTCTCTGGTTGAATCTCCTGGGGCCACCACATCATTaGAGAAGTAGCAGCCAAGCTTGTAACCAGGGATGTTGGCAAAAA +
Preference number: 5 (lower is better)
Translates to: PRSGLWLNLLGPPHH*RSSSQACNQGCWQK
Trigger: TTTTTGCCAACATCCCTGGTTACAAGCTTGGCTGCTACTTCTGCAATGATGTGGTGGCCCCAGGAGATTCAACCAGAGACCGGACCTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
ENST00000467121.1
CDS CCA 90 bp GTCAGCAAGACCAAGAACCCACCGGAAGGAACCCCACGAACCCACTaGAAGGAAGAAACTCCAGACACATCTGAAGGAACAAACTCTGGA +
Preference number: 5 (lower is better)
Translates to: VSKTKNPPEGTPRTH*KEETPDTSEGTNSG
Trigger: TCCAGAGTTTGTTCCTTCAGATGTGTCTGGAGTTTCTTCCTTCCAGTGGGTTCGTGGGGTTCCTTCCGGTGGGTTCTTGGTCTTGCTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460291.1
CDS-3UTR CAA 90 bp AGCTACATTGCAACCCAAGGTGCCGGCTCCAAGCAGCAGACATTTGACAGACACCCAAGCAGCAGACATTaGACAGACACAACCTTGTCC +
Preference number: 5 (lower is better)
Translates to: SYIATQGAGSKQQTFDRHPSSRH*TDTTLS
Trigger: GGACAAGGTTGTGTCTGTCAAATGTCTGCTGCTTGG...GTGTCTGTCAAATGTCTGCTGCTTGGAGCCGGCACCTTGGGTTGCAATGTAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424071.5
ENST00000434066.6
CDS-3UTR CAA 90 bp TGGTATCTTGAATCCCGAGCAACGCCGAACACTGGCCACTCCTGGGCAGCAGAGATAGGTATGCTCATGTaGAATCCTCTGGCATTCACA +
Preference number: 5 (lower is better)
Translates to: WYLESRATPNTGHSWAAEIGMLM*NPLAFT
Trigger: TGTGAATGCCAGAGGATTCAACATGAGCATACCTAT...CTCTGCTGCCCAGGAGTGGCCAGTGTTCGGCGTTGCTCGGGATTCAAGATACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354449.7
ENST00000354956.9
CDS CCA 90 bp CTTGAAAGACTCGAGTGTGTTGGTGTTATACAGTGTTCCAATAGCTaGGCAGCAACGGGCTGGGGTGGGAGCACTCATGTCAAAAGCACT +
Preference number: 5 (lower is better)
Translates to: LERLECVGVIQCSNS*AATGWGGSTHVKST
Trigger: AGTGCTTTTGACATGAGTGCTCCCACCCCAGCCCGTTGCTGCCCAGCTATTGGAACACTGTATAACACCAACACACTCGAGTCTTTCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000423116.1
ENST00000446450.6
ENST00000451513.5
ENST00000451830.5
CDS CCA 90 bp GCTGTGTTGCACCAGTTATTTACACTTGGCCAACAGGCAGGCAGGTaGTCAGAACGGAATAAATCCTCTGGAAGAGCACCTGTGCTCATC +
Preference number: 5 (lower is better)
Translates to: AVLHQLFTLGQQAGR*SERNKSSGRAPVLI
Trigger: GATGAGCACAGGTGCTCTTCCAGAGGATTTATTCCGTTCTGACCACCTGCCTGCCTGTTGGCCAAGTGTAAATAACTGGTGCAACACAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460444.5
CDS-3UTR CAA 90 bp TATCTTGAATCCCGAGCAACGCCGAACACTGGCCACTCCTGGGCAGCAGAGGGGGATCATATACACCAATaGTTATCTTCGTCCTTTGAC +
Preference number: 5 (lower is better)
Translates to: YLESRATPNTGHSWAAEGDHIHQ*LSSSFD
Trigger: GTCAAAGGACGAAGATAACAATTGGTGTATATGATC...CCCCTCTGCTGCCCAGGAGTGGCCAGTGTTCGGCGTTGCTCGGGATTCAAGATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354449.7
ENST00000354956.9
CDS TCA 90 bp TTTAAGAGCTGTAACACTCACTGCGAAGGTCTGCAGCTTCATTCTTaGAGTCAGCAAGACCAAGAACCCACCGGAAGGAACCCCACGAAC +
Preference number: 5 (lower is better)
Translates to: FKSCNTHCEGLQLHS*SQQDQEPTGRNPTN
Trigger: GTTCGTGGGGTTCCTTCCGGTGGGTTCTTGGTCTTGCTGACTTCAAGAATGAAGCTGCAGACCTTCGCAGTGAGTGTTACAGCTCTTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460291.1
CDS TCA 90 bp ATCCCCACAGGAAATGTGCAGTGGCGGTTGCCTCCCAAGAAAGCTTaGTCAGGGAAGAATCATAGACGCAGGACATACAGGTCTCAGAAA +
Preference number: 5 (lower is better)
Translates to: IPTGNVQWRLPPKKA*SGKNHRRRTYRSQK
Trigger: TTTCTGAGACCTGTATGTCCTGCGTCTATGATTCTTCCCTGATCAAGCTTTCTTGGGAGGCAACCGCCACTGCACATTTCCTGTGGGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469654.2
CDS CCA 90 bp TTCATATTGATCAAGAACCTGGTGAGGCACAAGCCCAAGAGAGGTTaGAGGCTCATTCATCCGATCGTCACTGCTGCTGGCAATGGCATA +
Preference number: 5 (lower is better)
Translates to: FILIKNLVRHKPKRG*RLIHPIVTAAGNGI
Trigger: TATGCCATTGCCAGCAGCAGTGACGATCGGATGAATGAGCCTCCAACCTCTCTTGGGCTTGTGCCTCACCAGGTTCTTGATCAATATGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354956.9
CDS-3UTR CAA 90 bp GGCCAAGGCCAAGGTTATTATTTAGCTCTGAACTGGTGGTATCTTGAATCCCGAAACGTCCTAGCTACATaGCAACCCAAGGTGCCGGCT +
Preference number: 5 (lower is better)
Translates to: GQGQGYYLALNWWYLESRNVLAT*QPKVPA
Trigger: AGCCGGCACCTTGGGTTGCAATGTAGCTAGGACGTT...TCGGGATTCAAGATACCACCAGTTCAGAGCTAAATAATAACCTTGGCCTTGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354449.7
ENST00000354956.9
CDS-3UTR CAA 90 bp AGGTATGCTCATGTTGAATCCTCTGGCATTCACACCGGGGAATATTTTCTGGAGAACGTCCTAGCTACATaGCAACCCAAGGTGCCGGCT +
Preference number: 5 (lower is better)
Translates to: RYAHVESSGIHTGEYFLENVLAT*QPKVPA
Trigger: AGCCGGCACCTTGGGTTGCAATGTAGCTAGGACGTT...CTCCAGAAAATATTCCCCGGTGTGAATGCCAGAGGATTCAACATGAGCATACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424071.5
CDS-3UTR CAA 90 bp CAAGGCCAAGGTTATTATTTAGCTCTGAACTGGTGGTATCTTGAATCCCGAGCAATGCCACAGGGTGGTTaGGACACAAGTCCCCAGCTC +
Preference number: 5 (lower is better)
Translates to: QGQGYYLALNWWYLESRAMPQGG*DTSPQL
Trigger: GAGCTGGGGACTTGTGTCCAAACCACCCTGTGGCAT...TGCTCGGGATTCAAGATACCACCAGTTCAGAGCTAAATAATAACCTTGGCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354449.7
ENST00000354956.9
CDS-3UTR CAA 90 bp TTCTTCCGTCCATTTGTTTATGTTCTGCCTCTCCTGCTTCATCCAGAGCCGAAGCAAGCCCAAGAGAGGTaGGAGGCTCATTCATCCGAT +
Preference number: 5 (lower is better)
Translates to: FFRPFVYVLPLLLHPEPKQAQER*EAHSSD
Trigger: ATCGGATGAATGAGCCTCCAACCTCTCTTGGGCTTG...CTTCGGCTCTGGATGAAGCAGGAGAGGCAGAACATAAACAAATGGACGGAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427759.5
CDS-3UTR CAA 90 bp TCAATAGCAAGGCCAAGGCCAAGGTTATTATTTAGCTCTGAACTGGTGGTATCTATGCCACAGGGTGGTTaGGACACAAGTCCCCAGCTC +
Preference number: 5 (lower is better)
Translates to: SIARPRPRLLFSSELVVSMPQGG*DTSPQL
Trigger: GAGCTGGGGACTTGTGTCCAAACCACCCTGTGGCAT...AGATACCACCAGTTCAGAGCTAAATAATAACCTTGGCCTTGGCCTTGCTATTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354449.7
ENST00000354956.9
CDS-3UTR CAA 90 bp GGCCAAGGCCAAGGTTATTATTTAGCTCTGAACTGGTGGTATCTTGAATCCCGACAAGCCCAAGAGAGGTaGGAGGCTCATTCATCCGAT +
Preference number: 5 (lower is better)
Translates to: GQGQGYYLALNWWYLESRQAQER*EAHSSD
Trigger: ATCGGATGAATGAGCCTCCAACCTCTCTTGGGCTTG...TCGGGATTCAAGATACCACCAGTTCAGAGCTAAATAATAACCTTGGCCTTGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354449.7
ENST00000354956.9
CDS-3UTR CAA 90 bp GTAGATGGACAACACGATGTCTCTCATACCTCCCCAGCCCCAATAACCATCACTGAACAAGCTGTACATTaGTCAAATGCCAGGCTGACG +
Preference number: 5 (lower is better)
Translates to: VDGQHDVSHTSPAPITITEQAVH*SNARLT
Trigger: CGTCAGCCTGGCATTTGACAAATGTACAGCTTGTTC...AGTGATGGTTATTGGGGCTGGGGAGGTATGAGAGACATCGTGTTGTCCATCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414717.5
CDS-3UTR CAA 90 bp GGCCAAGGCCAAGGTTATTATTTAGCTCTGAACTGGTGGTATCTTGAATCCCGATGCTCATTTCCCCATTaGGTCTGTGTTGGGTCACCC +
Preference number: 5 (lower is better)
Translates to: GQGQGYYLALNWWYLESRCSFPH*VCVGSP
Trigger: GGGTGACCCAACACAGACCAAATGGGGAAATGAGCA...TCGGGATTCAAGATACCACCAGTTCAGAGCTAAATAATAACCTTGGCCTTGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR CAA 90 bp AAGTCAGGAATTCATGAATTCAGTCTGGTCAGGCTTGCAGTCTGCTCAAGTACCCATAGCTGGTTCACCTaGACTGTGCCTTGGTTCCAG +
Preference number: 5 (lower is better)
Translates to: KSGIHEFSLVRLAVCSSTHSWFT*TVPWFQ
Trigger: CTGGAACCAAGGCACAGTCAAGGTGAACCAGCTATG...GGTACTTGAGCAGACTGCAAGCCTGACCAGACTGAATTCATGAATTCCTGACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414717.5
CDS-3UTR CAA 90 bp CTGGTTCACCTTGACTGTGCCTTGGTTCCAGGCCCAAGTAGCCCCTTGACTGGATTATTACAGAGACCTTaGAAGATACACAGAGGTAGA +
Preference number: 5 (lower is better)
Translates to: LVHLDCALVPGPSSPLTGLLQRP*KIHRGR
Trigger: TCTACCTCTGTGTATCTTCAAAGGTCTCTGTAATAA...TCCAGTCAAGGGGCTACTTGGGCCTGGAACCAAGGCACAGTCAAGGTGAACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414717.5
CDS GCA 90 bp GAAGTGCTTGATTCTTCCGTCCATTTGTTTATGTTCTGCCTCTCCTaGTTCATCCAGAGCCGAAGATCTCAAAGATGCTCAGCAGCTTGG +
Preference number: 5 (lower is better)
Translates to: EVLDSSVHLFMFCLS*FIQSRRSQRCSAAW
Trigger: CCAAGCTGCTGAGCATCTTTGAGATCTTCGGCTCTGGATGAAGCAGGAGAGGCAGAACATAAACAAATGGACGGAAGAATCAAGCACTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427759.5
CDS CCA 90 bp ATGTCCTTGGGAGCTTCATCCAGCCGATACTCGTTCAGCTTCTTCTaGGTCAACTCATGCCAAAACCCAACATCCAAGGCACTACTAAAA +
Preference number: 5 (lower is better)
Translates to: MSLGASSSRYSFSFF*VNSCQNPTSKALLK
Trigger: TTTTAGTAGTGCCTTGGATGTTGGGTTTTGGCATGAGTTGACCCAGAAGAAGCTGAACGAGTATCGGCTGGATGAAGCTCCCAAGGACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000418682.5
ENST00000419112.5
ENST00000423116.1
ENST00000435760.5
ENST00000444619.5
ENST00000446450.6
ENST00000451513.5
ENST00000451830.5
ENST00000460444.5
ENST00000469654.2
ENST00000470474.1
CDS CCA 90 bp ATACATTCACTGAGGTTCACCATCCTTGGTCCCATGCCTCCTTTCTaGTTCTTTTCCCATCCAACTGCTTTAGGACAATCATCTGTGGGC +
Preference number: 5 (lower is better)
Translates to: IHSLRFTILGPMPPF*FFSHPTALGQSSVG
Trigger: GCCCACAGATGATTGTCCTAAAGCAGTTGGATGGGAAAAGAACCAGAAAGGAGGCATGGGACCAAGGATGGTGAACCTCAGTGAATGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434066.6
CDS-3UTR CAA 90 bp GTAGGAACCAATCTCCAACACATCAGTTTGAGATTTAGATCCACTGATGACTCACACATCTCTGCGGGCTaGCTCCAGAGTGACACTGGA +
Preference number: 5 (lower is better)
Translates to: VGTNLQHISLRFRSTDDSHISAG*LQSDTG
Trigger: TCCAGTGTCACTCTGGAGCAAGCCCGCAGAGATGTG...TGAGTCATCAGTGGATCTAAATCTCAAACTGATGTGTTGGAGATTGGTTCCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424071.5
CDS-3UTR CAA 90 bp TCGTTGAGAACACTTTTCTATATGGGTGATTTTGAGACCATCGTTACGCTGTGCGACAGCCACTGGAACTaGGACTGGCTACTTTGGGAG +
Preference number: 5 (lower is better)
Translates to: SLRTLFYMGDFETIVTLCDSHWN*DWLLWE
Trigger: CTCCCAAAGTAGCCAGTCCAAGTTCCAGTGGCTGTC...GCACAGCGTAACGATGGTCTCAAAATCACCCATATAGAAAAGTGTTCTCAACGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS TCA 90 bp AGAACGGATGCACTGGATACCAGCATTATGGGGTTTGAGAAGCCTTaGTCAGGGAAGAATCATAGACGCAGGACATACAGGTCTCAGAAA +
Preference number: 5 (lower is better)
Translates to: RTDALDTSIMGFEKP*SGKNHRRRTYRSQK
Trigger: TTTCTGAGACCTGTATGTCCTGCGTCTATGATTCTTCCCTGATCAAGGCTTCTCAAACCCCATAATGCTGGTATCCAGTGCATCCGTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435760.5
ENST00000451513.5
CDS-3UTR CAA 90 bp CTGGTGTCCATCAATAGGAAGACGACATCATGGCTTTCGATGAGCTGCTCCAGTATAGGTATGCTCATGTaGAATCCTCTGGCATTCACA +
Preference number: 5 (lower is better)
Translates to: LVSINRKTTSWLSMSCSSIGMLM*NPLAFT
Trigger: TGTGAATGCCAGAGGATTCAACATGAGCATACCTAT...ACTGGAGCAGCTCATCGAAAGCCATGATGTCGTCTTCCTATTGATGGACACCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424071.5
CDS-3UTR CAA 90 bp CAAGGCCAAGGTTATTATTTAGCTCTGAACTGGTGGTATCTTGAATCCCGAGCAATGACCAGCTTTCTCTaGCTTGCAGCAATGACGGCA +
Preference number: 5 (lower is better)
Translates to: QGQGYYLALNWWYLESRAMTSFL*LAAMTA
Trigger: TGCCGTCATTGCTGCAAGCAAGAGAAAGCTGGTCAT...TGCTCGGGATTCAAGATACCACCAGTTCAGAGCTAAATAATAACCTTGGCCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354449.7
ENST00000354956.9
CDS-3UTR CAA 90 bp ACACGATGTCTCTCATACCTCCCCAGCCCCAATAACCATCACTCATGGCCCAGTTCCTTCTCGTTCATATaGATCAAGAACTTTGGAAGA +
Preference number: 5 (lower is better)
Translates to: TRCLSYLPSPNNHHSWPSSFSFI*IKNFGR
Trigger: TCTTCCAAAGTTCTTGATCAATATGAACGAGAAGGA...ACTGGGCCATGAGTGATGGTTATTGGGGCTGGGGAGGTATGAGAGACATCGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414717.5
CDS TCA 90 bp GAGGAGGAACTTGTTGAGGAGTACAGGGTTTTCAAGAGCAGTGCCTaGTTTTATGGATTCCCATATCCTCAAGACACTCGCAGTCTAGAT +
Preference number: 5 (lower is better)
Translates to: EEELVEEYRVFKSSA*FYGFPYPQDTRSLD
Trigger: ATCTAGACTGCGAGTGTCTTGAGGATATGGGAATCCATAAAATCAGGCACTGCTCTTGAAAACCCTGTACTCCTCAACAAGTTCCTCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488924.5
CDS GCA 90 bp CCATTCACAGAAGTGCTTGATTCTTCCGTCCATTTGTTTATGTTCTaGCTCTCCTGCTTCATCCAGAGCCGAAGATCTCAAAGATGCTCA +
Preference number: 5 (lower is better)
Translates to: PFTEVLDSSVHLFMF*LSCFIQSRRSQRCS
Trigger: TGAGCATCTTTGAGATCTTCGGCTCTGGATGAAGCAGGAGAGGCAGAACATAAACAAATGGACGGAAGAATCAAGCACTTCTGTGAATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427759.5
CDS CCA 90 bp ATACATTCACTGAGGTTCACCATCCTTGGTCCCATGCCTCCTTTCTaGTTCTTTTCCCATCCAACTGCTTTAGGACAATCTGGGCTAAAT +
Preference number: 5 (lower is better)
Translates to: IHSLRFTILGPMPPF*FFSHPTALGQSGLN
Trigger: ATTTAGCCCAGATTGTCCTAAAGCAGTTGGATGGGAAAAGAACCAGAAAGGAGGCATGGGACCAAGGATGGTGAACCTCAGTGAATGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
ENST00000461278.1
ENST00000478638.5
CDS CCA 90 bp AAGCTTTGTTTAAATACTCATCTCCTACTAGCAAACTCACCCTTCTaGATGCTGCAAAACAGATACCATCAATTCCACGGCCAGGGCTCC +
Preference number: 5 (lower is better)
Translates to: KLCLNTHLLLANSPF*MLQNRYHQFHGQGS
Trigger: GGAGCCCTGGCCGTGGAATTGATGGTATCTGTTTTGCAGCATCCAGAAGGGTGAGTTTGCTAGTAGGAGATGAGTATTTAAACAAAGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467121.1
CDS-3UTR CAA 90 bp GCATGGAGGACCAAGTCCCAGGTCAATAGCAAGGCCAAGGCCAAGGTTATTATTTGTTATCTTCGTCCTTaGACCTTGGAAGAAATCACT +
Preference number: 5 (lower is better)
Translates to: AWRTKSQVNSKAKAKVIICYLRP*TLEEIT
Trigger: AGTGATTTCTTCCAAGGTCAAAGGACGAAGATAACA...AATAATAACCTTGGCCTTGGCCTTGCTATTGACCTGGGACTTGGTCCTCCATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR CAA 90 bp CTAGGCAATCTTCAAACTCATAGAGAGGCTGCCTCACAGGATTGGAGTAGGAGATTGACAGACACAACCTaGTCCAAGTCTAAAGTAGGA +
Preference number: 5 (lower is better)
Translates to: LGNLQTHREAASQDWSRRLTDTT*SKSKVG
Trigger: TCCTACTTTAGACTTGGACAAGGTTGTGTCTGTCAA...TCTCCTACTCCAATCCTGTGAGGCAGCCTCTCTATGAGTTTGAAGATTGCCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424071.5
CDS-3UTR CAA 90 bp GGCCAAGGCCAAGGTTATTATTTAGCTCTGAACTGGTGGTATCTTGAATCCCGAAATCCCAAAGCAGCATaGATGACCAGCTTTCTCTTG +
Preference number: 5 (lower is better)
Translates to: GQGQGYYLALNWWYLESRNPKAA*MTSFLL
Trigger: CAAGAGAAAGCTGGTCATCAATGCTGCTTTGGGATT...TCGGGATTCAAGATACCACCAGTTCAGAGCTAAATAATAACCTTGGCCTTGGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354449.7
ENST00000354956.9
CDS-3UTR CAA 90 bp GCTGCGGTGTGGGATGCTGGAGTTTGGCTGCAGGCTGACATCATTTATTTTTGCGAAGAATTAAACACCTaGGCTAGGAAGTTAAATCCT +
Preference number: 5 (lower is better)
Translates to: AAVWDAGVWLQADIIYFCEELNT*ARKLNP
Trigger: AGGATTTAACTTCCTAGCCAAGGTGTTTAATTCTTC...GCAAAAATAAATGATGTCAGCCTGCAGCCAAACTCCAGCATCCCACACCGCAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR CAA 90 bp TCATTGTTCATCTACCTTATGGAACAAAGCAGCCAAGAATCAGATGGGCGAGGAAAGATGCTCAGCAGCTaGGGTTTCTTGATGCAGCAA +
Preference number: 5 (lower is better)
Translates to: SLFIYLMEQSSQESDGRGKMLSS*GFLMQQ
Trigger: TTGCTGCATCAAGAAACCCAAGCTGCTGAGCATCTT...TCCTCGCCCATCTGATTCTTGGCTGCTTTGTTCCATAAGGTAGATGAACAATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427759.5
CDS TCA 90 bp CAAGAACTTTGGAAGAACAAGCTGTACATTTGTCAAATGCCAGGCTaGCGGGAAGGACATTATCAAACCGTGAAAGAAATCCCCGGATCT +
Preference number: 5 (lower is better)
Translates to: QELWKNKLYICQMPG*REGHYQTVKEIPGS
Trigger: AGATCCGGGGATTTCTTTCACGGTTTGATAATGTCCTTCCCGTCAGCCTGGCATTTGACAAATGTACAGCTTGTTCTTCCAAAGTTCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354449.7
ENST00000414717.5
ENST00000427759.5
ENST00000446110.1
CDS CCA 90 bp ATACATTCACTGAGGTTCACCATCCTTGGTCCCATGCCTCCTTTCTaGTTCTTTTCCCATCCAACTGCTTTAGGACAATCTGTTTTAGTG +
Preference number: 5 (lower is better)
Translates to: IHSLRFTILGPMPPF*FFSHPTALGQSVLV
Trigger: CACTAAAACAGATTGTCCTAAAGCAGTTGGATGGGAAAAGAACCAGAAAGGAGGCATGGGACCAAGGATGGTGAACCTCAGTGAATGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424071.5
CDS-3UTR CAA 90 bp GGCCAAGGCCAAGGTTATTATTTAGCTCTGAACTGGTGGTATCTTGAATCCCGAAAAGACTCGAGTGTGTaGGTGTTATACAGTGTTCCA +
Preference number: 5 (lower is better)
Translates to: GQGQGYYLALNWWYLESRKDSSV*VLYSVP
Trigger: TGGAACACTGTATAACACCAACACACTCGAGTCTTT...TCGGGATTCAAGATACCACCAGTTCAGAGCTAAATAATAACCTTGGCCTTGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354449.7
ENST00000354956.9
CDS-3UTR CAA 90 bp TCCACTGATGACTCAGCTAACCTTTTAGGGTCCATACATTCACTGAGGTTCACCTTGACAGACACAACCTaGTCCAAGTCTAAAGTAGGA +
Preference number: 5 (lower is better)
Translates to: STDDSANLLGSIHSLRFTLTDTT*SKSKVG
Trigger: TCCTACTTTAGACTTGGACAAGGTTGTGTCTGTCAA...GGTGAACCTCAGTGAATGTATGGACCCTAAAAGGTTAGCTGAGTCATCAGTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434066.6
CDS-3UTR CAA 90 bp GGCCAAGGCCAAGGTTATTATTTAGCTCTGAACTGGTGGTATCTTGAATCCCGAATAGGTATGCTCATGTaGAATCCTCTGGCATTCACA +
Preference number: 5 (lower is better)
Translates to: GQGQGYYLALNWWYLESRIGMLM*NPLAFT
Trigger: TGTGAATGCCAGAGGATTCAACATGAGCATACCTAT...TCGGGATTCAAGATACCACCAGTTCAGAGCTAAATAATAACCTTGGCCTTGGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354449.7
ENST00000354956.9
CDS-3UTR CAA 90 bp GTAGATGGACAACACGATGTCTCTCATACCTCCCCAGCCCCAATAACCATCACTGAAGAATTAAACACCTaGGCTAGGAAGTTAAATCCT +
Preference number: 5 (lower is better)
Translates to: VDGQHDVSHTSPAPITITEELNT*ARKLNP
Trigger: AGGATTTAACTTCCTAGCCAAGGTGTTTAATTCTTC...AGTGATGGTTATTGGGGCTGGGGAGGTATGAGAGACATCGTGTTGTCCATCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414717.5
CDS-3UTR CAA 90 bp CTGTACTGGGCTTCCAAGCTTTGGCATTCAGGCCCCTATATTTTCTGTAGGAAATTCATAGCCACGAGTTaGTTATTGCTACAGGCTACT +
Preference number: 5 (lower is better)
Translates to: LYWASKLWHSGPYIFCRKFIATS*LLLQAT
Trigger: AGTAGCCTGTAGCAATAACAAACTCGTGGCTATGAA...TTTCCTACAGAAAATATAGGGGCCTGAATGCCAAAGCTTGGAAGCCCAGTACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR CAA 90 bp TCGTTGAGAACACTTTTCTATATGGGTGATTTTGAGACCATCGTTACGCTGTGCAGTGGCTGCAGGCCTTaGAAAAGTGGAGGAAAGAAA +
Preference number: 5 (lower is better)
Translates to: SLRTLFYMGDFETIVTLCSGCRP*KSGGKK
Trigger: TTTCTTTCCTCCACTTTTCAAAGGCCTGCAGCCACT...GCACAGCGTAACGATGGTCTCAAAATCACCCATATAGAAAAGTGTTCTCAACGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR CAA 90 bp CATCATTGTTCATCTACCTTATGGAACAAAGCAGCCAAGAATCAGATGGGCGAGGATTCTTCCGTCCATTaGTTTATGTTCTGCCTCTCC +
Preference number: 5 (lower is better)
Translates to: HHCSSTLWNKAAKNQMGEDSSVH*FMFCLS
Trigger: GGAGAGGCAGAACATAAACAAATGGACGGAAGAATC...CTCGCCCATCTGATTCTTGGCTGCTTTGTTCCATAAGGTAGATGAACAATGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427759.5
CDS-3UTR CAA 90 bp CTGTACTGGGCTTCCAAGCTTTGGCATTCAGGCCCCTATATTTTCTGTAGGAAATATCTCATTTGCTGCTaGTTCCAAAAGGAGCTTCTT +
Preference number: 5 (lower is better)
Translates to: LYWASKLWHSGPYIFCRKYLICC*FQKELL
Trigger: AAGAAGCTCCTTTTGGAACAAGCAGCAAATGAGATA...TTTCCTACAGAAAATATAGGGGCCTGAATGCCAAAGCTTGGAAGCCCAGTACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR CAA 90 bp GACTCAGCTAACCTTTTAGGGTCCATACATTCACTGAGGTTCACCATCCTTGGTTGTTATCTTCGTCCTTaGACCTTGGAAGAAATCACT +
Preference number: 5 (lower is better)
Translates to: DSANLLGSIHSLRFTILGCYLRP*TLEEIT
Trigger: AGTGATTTCTTCCAAGGTCAAAGGACGAAGATAACA...ACCAAGGATGGTGAACCTCAGTGAATGTATGGACCCTAAAAGGTTAGCTGAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434066.6
CDS-3UTR CAA 90 bp GGCATAGGTATGCTCATGTTGAATCCTCTGGCATTCACACCGGGGAATATTTTCCTCCAACACATCAGTTaGAGATTTAGATCCACTGAT +
Preference number: 5 (lower is better)
Translates to: GIGMLMLNPLAFTPGNIFLQHIS*RFRSTD
Trigger: ATCAGTGGATCTAAATCTCAAACTGATGTGTTGGAG...GAAAATATTCCCCGGTGTGAATGCCAGAGGATTCAACATGAGCATACCTATGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424071.5
CDS-3UTR CAA 90 bp TATGGAACAAAGCAGCCAAGAATCAGATGGGCGAGGAATAAAAGATTCCATTCAGAACAAGCTGTACATTaGTCAAATGCCAGGCTGACG +
Preference number: 5 (lower is better)
Translates to: YGTKQPRIRWARNKRFHSEQAVH*SNARLT
Trigger: CGTCAGCCTGGCATTTGACAAATGTACAGCTTGTTC...TGAATGGAATCTTTTATTCCTCGCCCATCTGATTCTTGGCTGCTTTGTTCCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427759.5
CDS TCA 90 bp ACACAAATTATACATTCAAGTATGAATGCAAGGAATTGTTCTGCTTaGGAGCTGGTAGAGATCTATTTCAGGACAGGCAGCCGACTCCTG +
Preference number: 5 (lower is better)
Translates to: TQIIHSSMNARNCSA*ELVEIYFRTGSRLL
Trigger: CAGGAGTCGGCTGCCTGTCCTGAAATAGATCTCTACCAGCTCTCAAGCAGAACAATTCCTTGCATTCATACTTGAATGTATAATTTGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446110.1
CDS GCA 90 bp TTCCCATATCTCATTTGCTGCTTGTTCCAAAAGGAGCTTCTTATCTaGAGTCTTGAAAGACTCGAGTGTGTTGGTGTTATACAGTGTTCC +
Preference number: 5 (lower is better)
Translates to: FPYLICCLFQKELLI*SLERLECVGVIQCS
Trigger: GGAACACTGTATAACACCAACACACTCGAGTCTTTCAAGACTGCAGATAAGAAGCTCCTTTTGGAACAAGCAGCAAATGAGATATGGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000423116.1
ENST00000446450.6
ENST00000451513.5
ENST00000451830.5
CDS-3UTR CAA 90 bp GTAGGAACCAATCTCCAACACATCAGTTTGAGATTTAGATCCACTGATGACTCACTTCGTCCTTTGACCTaGGAAGAAATCACTGTAGTG +
Preference number: 5 (lower is better)
Translates to: VGTNLQHISLRFRSTDDSLRPLT*EEITVV
Trigger: CACTACAGTGATTTCTTCCAAGGTCAAAGGACGAAG...TGAGTCATCAGTGGATCTAAATCTCAAACTGATGTGTTGGAGATTGGTTCCTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434066.6
CDS-3UTR CAA 90 bp CAAGGCCAAGGTTATTATTTAGCTCTGAACTGGTGGTATCTTGAATCCCGAGCACTCCAACACATCAGTTaGAGATTTAGATCCACTGAT +
Preference number: 5 (lower is better)
Translates to: QGQGYYLALNWWYLESRALQHIS*RFRSTD
Trigger: ATCAGTGGATCTAAATCTCAAACTGATGTGTTGGAG...TGCTCGGGATTCAAGATACCACCAGTTCAGAGCTAAATAATAACCTTGGCCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354449.7
ENST00000354956.9
CDS-3UTR CAA 90 bp GGCCAAGGTTATTATTTAGCTCTGAACTGGTGGTATCTTGAATCCCGAGCAACGGAAGAATTAAACACCTaGGCTAGGAAGTTAAATCCT +
Preference number: 5 (lower is better)
Translates to: GQGYYLALNWWYLESRATEELNT*ARKLNP
Trigger: AGGATTTAACTTCCTAGCCAAGGTGTTTAATTCTTC...CGTTGCTCGGGATTCAAGATACCACCAGTTCAGAGCTAAATAATAACCTTGGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354449.7
ENST00000354956.9
CDS-3UTR CAA 90 bp AGTCCTAGATATACTTACTGCTGGTACAGTTGTACTCTAAGATTGGTATTTGATCCAGATCTCAGCAGCTaGGGTTTCTTGATGCAGCAA +
Preference number: 5 (lower is better)
Translates to: SPRYTYCWYSCTLRLVFDPDLSS*GFLMQQ
Trigger: TTGCTGCATCAAGAAACCCAAGCTGCTGAGATCTGG...ATCAAATACCAATCTTAGAGTACAACTGTACCAGCAGTAAGTATATCTAGGACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR CAA 90 bp GAAGTGCTTGATTCTTCCGTCCATTTGTTTATGTTCTGCCTCTCCTGCTTCATCTCCTTCTCGTTCATATaGATCAAGAACTTTGGAAGA +
Preference number: 5 (lower is better)
Translates to: EVLDSSVHLFMFCLSCFISFSFI*IKNFGR
Trigger: TCTTCCAAAGTTCTTGATCAATATGAACGAGAAGGA...GATGAAGCAGGAGAGGCAGAACATAAACAAATGGACGGAAGAATCAAGCACTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427759.5
CDS GCA 90 bp GCATGGTACGGTCACGGAAGCAAACAACTTCAACAGACTGGAAACTaGTACTCCTGTTGTCATGCCCGGATTTTTATTTATTTATTATTT +
Preference number: 5 (lower is better)
Translates to: AWYGHGSKQLQQTGN*YSCCHARIFIYLLF
Trigger: AAATAATAAATAAATAAAAATCCGGGCATGACAACAGGAGTAGCAGTTTCCAGTCTGTTGAAGTTGTTTGCTTCCGTGACCGTACCATGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461278.1
CDS-3UTR CAA 90 bp GTAGGAACCAATCTCCAACACATCAGTTTGAGATTTAGATCCACTGATGACTCACTCCAACACATCAGTTaGAGATTTAGATCCACTGAT +
Preference number: 5 (lower is better)
Translates to: VGTNLQHISLRFRSTDDSLQHIS*RFRSTD
Trigger: ATCAGTGGATCTAAATCTCAAACTGATGTGTTGGAG...TGAGTCATCAGTGGATCTAAATCTCAAACTGATGTGTTGGAGATTGGTTCCTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424071.5
ENST00000434066.6
CDS-3UTR CAA 90 bp TCGTTGAGAACACTTTTCTATATGGGTGATTTTGAGACCATCGTTACGCTGTGCTTACTGCTGGTACAGTaGTACTCTAAGATTGGTATT +
Preference number: 5 (lower is better)
Translates to: SLRTLFYMGDFETIVTLCLLLVQ*YSKIGI
Trigger: AATACCAATCTTAGAGTACAACTGTACCAGCAGTAA...GCACAGCGTAACGATGGTCTCAAAATCACCCATATAGAAAAGTGTTCTCAACGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354449.7
CDS-3UTR CAA 90 bp GACAAAGATTATCATATGCACACTCTAGTGCTTCAATCTGTTTTAGTGAAAACCAAGAGGAGGAACTTGTaGAGGAGTACAGGGTTTTCA +
Preference number: 5 (lower is better)
Translates to: DKDYHMHTLVLQSVLVKTKRRNL*RSTGFS
Trigger: TGAAAACCCTGTACTCCTCAACAAGTTCCTCCTCTT...GGTTTTCACTAAAACAGATTGAAGCACTAGAGTGTGCATATGATAATCTTTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000418682.5
CDS-3UTR CAA 90 bp GCGAGGAATAAAAGATTCCATTCACAGAAGTGCTTGATTCTTCCGTCCATTTGTGAAGAATTAAACACCTaGGCTAGGAAGTTAAATCCT +
Preference number: 5 (lower is better)
Translates to: ARNKRFHSQKCLILPSICEELNT*ARKLNP
Trigger: AGGATTTAACTTCCTAGCCAAGGTGTTTAATTCTTC...ACAAATGGACGGAAGAATCAAGCACTTCTGTGAATGGAATCTTTTATTCCTCGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427759.5
CDS TCA 90 bp ACACTATACTGGAGGACCGTGAGGATAACAGAAGATGATGGAAAATaGAATTTACAATCACCTACCATTGTAGTAATAACCCTTAATGTC +
Preference number: 5 (lower is better)
Translates to: TLYWRTVRITEDDGK*NLQSPTIVVITLNV
Trigger: GACATTAAGGGTTATTACTACAATGGTAGGTGATTGTAAATTTCATTTTCCATCATCTTCTGTTATCCTCACGGTCCTCCAGTATAGTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470474.1
CDS-3UTR CAA 90 bp AAGTCTAAAGTAGGAACCAATCTCCAACACATCAGTTTGAGATTTAGATCCACTGATCATATACACCAATaGTTATCTTCGTCCTTTGAC +
Preference number: 5 (lower is better)
Translates to: KSKVGTNLQHISLRFRSTDHIHQ*LSSSFD
Trigger: GTCAAAGGACGAAGATAACAATTGGTGTATATGATC...AGTGGATCTAAATCTCAAACTGATGTGTTGGAGATTGGTTCCTACTTTAGACTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434066.6
CDS CCA 72 bp CCGATGACGCAACGCGGTCCTGCCCGCGCTTGCCACTaGGAAGCGGCGCGCGTGCGCAAAGGAGCAGAGGCA +
Preference number: 6 (lower is better)
Translates to: PMTQRGPARACH*EAARVRKGAEA
Trigger: TGCCTCTGCTCCTTTGCGCACGCGCGCCGCTTCCCAGTGGCAAGCGCGGGCAGGACCGCGTTGCGTCATCGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451513.5
CDS TCA 72 bp TGCCGCCGCTCAACTTCCGGCAACCACAGCTCTCTCTaGGGCGCGCGCCCCGATGACGCAACGCGGTCCTGC +
Preference number: 6 (lower is better)
Translates to: CRRSTSGNHSSL*GARPDDATRSC
Trigger: GCAGGACCGCGTTGCGTCATCGGGGCGCGCGCCTCAGAGAGAGCTGTGGTTGCCGGAAGTTGAGCGGCGGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451830.5
CDS TCA 72 bp GCTCGCCGCTCAACTTCCGGCAACCACAGCTCTCTCTaGGGCGCGCGCCCCGATGACGCAACGCGGTCCTGC +
Preference number: 6 (lower is better)
Translates to: ARRSTSGNHSSL*GARPDDATRSC
Trigger: GCAGGACCGCGTTGCGTCATCGGGGCGCGCGCCTCAGAGAGAGCTGTGGTTGCCGGAAGTTGAGCGGCGAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451513.5
CDS TCA 72 bp ATCCGCCGCTCAACTTCCGGCAACCACAGCTCTCTCTaGGGCGCGCGCCCCGATGACGCAACGCGGTCCTGC +
Preference number: 6 (lower is better)
Translates to: IRRSTSGNHSSL*GARPDDATRSC
Trigger: GCAGGACCGCGTTGCGTCATCGGGGCGCGCGCCTCAGAGAGAGCTGTGGTTGCCGGAAGTTGAGCGGCGGAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435760.5
CDS GCA 72 bp ACCACCCAGAAACTGGCAGAGGAGGATCCTGAGACTTaGTGTGACCCTCGCCCTCCCTGGCGAGCTCGCCCC +
Preference number: 6 (lower is better)
Translates to: TTQKLAEEDPET*CDPRPPWRARP
Trigger: GGGGCGAGCTCGCCAGGGAGGGCGAGGGTCACAGCAAGTCTCAGGATCCTCCTCTGCCAGTTTCTGGGTGGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419112.5
ENST00000469654.2
CDS TCA 72 bp AGCTTCCAAGTCAGAAGACCCCGGACTGAACCAGTCTaGGGGGACGCGGCTACAGACGAAGGGCGCCAGCCG +
Preference number: 6 (lower is better)
Translates to: SFQVRRPRTEPV*GDAATDEGRQP
Trigger: CGGCTGGCGCCCTTCGTCTGTAGCCGCGTCCCCTCAGACTGGTTCAGTCCGGGGTCTTCTGACTTGGAAGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000419112.5
ENST00000469654.2
CDS CCA 72 bp TTCCACGGCCAGGGCTCCTGCAATCACGGCCAGTCCTaGACGACTCACAGTGCACTGCTGGTCCAAGGTCCG +
Preference number: 6 (lower is better)
Translates to: FHGQGSCNHGQS*TTHSALLVQGP
Trigger: CGGACCTTGGACCAGCAGTGCACTGTGAGTCGTCCAGGACTGGCCGTGATTGCAGGAGCCCTGGCCGTGGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
ENST00000467121.1
CDS CCA 72 bp CTATTTCAGGACAGGCAGCCGACTCCTGAGTGCAGGTaGCCTGATGGGCGGGGAAGGTGCCATTCTTGGGCC +
Preference number: 6 (lower is better)
Translates to: LFQDRQPTPECR*PDGRGRCHSWA
Trigger: GGCCCAAGAATGGCACCTTCCCCGCCCATCAGGCCACCTGCACTCAGGAGTCGGCTGCCTGTCCTGAAATAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446110.1
CDS CCA 72 bp ATCACGGCCAGTCCTGGACGACTCACAGTGCACTGCTaGTCCAAGGTCCGGTCTCTGGTTGAATCTCCTGGG +
Preference number: 6 (lower is better)
Translates to: ITASPGRLTVHC*SKVRSLVESPG
Trigger: CCCAGGAGATTCAACCAGAGACCGGACCTTGGACCAGCAGTGCACTGTGAGTCGTCCAGGACTGGCCGTGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
ENST00000467121.1
CDS CCA 72 bp TCCCCGGATCTGGTGAGGCACAAGCCCAAGAGAGGTTaGAGGCTCATTCATCCGATCGTCACTGCTGCTGGC +
Preference number: 6 (lower is better)
Translates to: SPDLVRHKPKRG*RLIHPIVTAAG
Trigger: GCCAGCAGCAGTGACGATCGGATGAATGAGCCTCCAACCTCTCTTGGGCTTGTGCCTCACCAGATCCGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354449.7
ENST00000414717.5
ENST00000427759.5
ENST00000446110.1
ENST00000446450.6
CDS GCA 72 bp GCAATCACGGCCAGTCCTGGACGACTCACAGTGCACTaGTGGTCCAAGGTCCGGTCTCTGGTTGAATCTCCT +
Preference number: 6 (lower is better)
Translates to: AITASPGRLTVH*WSKVRSLVESP
Trigger: AGGAGATTCAACCAGAGACCGGACCTTGGACCAGCAGTGCACTGTGAGTCGTCCAGGACTGGCCGTGATTGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
ENST00000467121.1
CDS GCA 72 bp CTCCTGCAATCACGGCCAGTCCTGGACGACTCACAGTaGACTGCTGGTCCAAGGTCCGGTCTCTGGTTGAAT +
Preference number: 6 (lower is better)
Translates to: LLQSRPVLDDSQ*TAGPRSGLWLN
Trigger: ATTCAACCAGAGACCGGACCTTGGACCAGCAGTGCACTGTGAGTCGTCCAGGACTGGCCGTGATTGCAGGAG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
ENST00000467121.1
CDS GCA 72 bp AGGAAATGTGCAGTGGCGGTTGCCTCCCAAGAAAGCTaGGCCGCTCAACTTCCGGCAACCACAGCTCTCTCT +
Preference number: 6 (lower is better)
Translates to: RKCAVAVASQES*AAQLPATTALS
Trigger: AGAGAGAGCTGTGGTTGCCGGAAGTTGAGCGGCGCAGCTTTCTTGGGAGGCAACCGCCACTGCACATTTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460444.5
CDS CAA 72 bp ATCCCCGGATCTGGTGAGGCACAAGCCCAAGAGAGGTaGGAGGCTCATTCATCCGATCGTCACTGCTGCTGG +
Preference number: 6 (lower is better)
Translates to: IPGSGEAQAQER*EAHSSDRHCCW
Trigger: CCAGCAGCAGTGACGATCGGATGAATGAGCCTCCAACCTCTCTTGGGCTTGTGCCTCACCAGATCCGGGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354449.7
ENST00000414717.5
ENST00000427759.5
ENST00000446110.1
ENST00000446450.6
CDS TCA 72 bp AACGGGCTGGGGTGGGAGCACTCATGTCAAAAGCACTaGACTCCAATGTTAAGCGAGCTGGCAGCCCAGCAG +
Preference number: 6 (lower is better)
Translates to: NGLGWEHSCQKH*TPMLSELAAQQ
Trigger: CTGCTGGGCTGCCAGCTCGCTTAACATTGGAGTTCAGTGCTTTTGACATGAGTGCTCCCACCCCAGCCCGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000419112.5
ENST00000423116.1
ENST00000444619.5
ENST00000446450.6
ENST00000451513.5
ENST00000451830.5
CDS GCA 72 bp GAGAGGTTGGAGGCTCATTCATCCGATCGTCACTGCTaGTGGCAATGGCATAGCCCCCTTCTGGATGCTGCA +
Preference number: 6 (lower is better)
Translates to: ERLEAHSSDRHC*WQWHSPLLDAA
Trigger: TGCAGCATCCAGAAGGGGGCTATGCCATTGCCAGCAGCAGTGACGATCGGATGAATGAGCCTCCAACCTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS GCA 72 bp AAGATCAAATCCCCACAGGAAATGTGCAGTGGCGGTTaGCTCCCAAGAAAGCTGCGCCGCTCAACTTCCGGC +
Preference number: 6 (lower is better)
Translates to: KIKSPQEMCSGG*LPRKLRRSTSG
Trigger: GCCGGAAGTTGAGCGGCGCAGCTTTCTTGGGAGGCAACCGCCACTGCACATTTCCTGTGGGGATTTGATCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460444.5
CDS GCA 72 bp CAAAACAGATACCATCAATTCCACGGCCAGGGCTCCTaGAATCACGGCCAGTCCTGGACGACTCACAGTGCA +
Preference number: 6 (lower is better)
Translates to: QNRYHQFHGQGS*NHGQSWTTHSA
Trigger: TGCACTGTGAGTCGTCCAGGACTGGCCGTGATTGCAGGAGCCCTGGCCGTGGAATTGATGGTATCTGTTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
ENST00000467121.1
CDS GCA 72 bp CAAGAGAGGTTGGAGGCTCATTCATCCGATCGTCACTaGTGCTGGCAATGGCATAGCCCCCTTCTGGATGCT +
Preference number: 6 (lower is better)
Translates to: QERLEAHSSDRH*CWQWHSPLLDA
Trigger: AGCATCCAGAAGGGGGCTATGCCATTGCCAGCAGCAGTGACGATCGGATGAATGAGCCTCCAACCTCTCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS GCA 72 bp AAACTGCAGTTTAGAGAGTCCAGGATCCCCCGTAGCTaGCGCCATTATTTCTTGCCGCCGCTCAACTTCCGG +
Preference number: 6 (lower is better)
Translates to: KLQFRESRIPRS*RHYFLPPLNFR
Trigger: CCGGAAGTTGAGCGGCGGCAAGAAATAATGGCGGCAGCTACGGGGGATCCTGGACTCTCTAAACTGCAGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000418682.5
ENST00000451830.5
ENST00000470474.1
CDS CCA 72 bp CTCGAGTGTGTTGGTGTTATACAGTGTTCCAATAGCTaGGCAGCAACGGGCTGGGGTGGGAGCACTCATGTC +
Preference number: 6 (lower is better)
Translates to: LECVGVIQCSNS*AATGWGGSTHV
Trigger: GACATGAGTGCTCCCACCCCAGCCCGTTGCTGCCCAGCTATTGGAACACTGTATAACACCAACACACTCGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000423116.1
ENST00000446450.6
ENST00000451513.5
ENST00000451830.5
CDS CCA 72 bp GCCATTTCTGGAAGCTTCACTTCGAAGATGATGCTGTaGGCAACGTCTCTCGCCCCCTGCATGGTACGGTCA +
Preference number: 6 (lower is better)
Translates to: AISGSFTSKMML*ATSLAPCMVRS
Trigger: TGACCGTACCATGCAGGGGGCGAGAGACGTTGCCCACAGCATCATCTTCGAAGTGAAGCTTCCAGAAATGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
ENST00000461278.1
ENST00000478638.5
CDS CCA 72 bp ATCAAGAACCTGGTGAGGCACAAGCCCAAGAGAGGTTaGAGGCTCATTCATCCGATCGTCACTGCTGCTGGC +
Preference number: 6 (lower is better)
Translates to: IKNLVRHKPKRG*RLIHPIVTAAG
Trigger: GCCAGCAGCAGTGACGATCGGATGAATGAGCCTCCAACCTCTCTTGGGCTTGTGCCTCACCAGGTTCTTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354956.9
CDS CAA 72 bp GATCAAGAACCTGGTGAGGCACAAGCCCAAGAGAGGTaGGAGGCTCATTCATCCGATCGTCACTGCTGCTGG +
Preference number: 6 (lower is better)
Translates to: DQEPGEAQAQER*EAHSSDRHCCW
Trigger: CCAGCAGCAGTGACGATCGGATGAATGAGCCTCCAACCTCTCTTGGGCTTGTGCCTCACCAGGTTCTTGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354956.9
CDS CAA 90 bp GTGAAAGAAATCCCCGGATCTGGTGAGGCACAAGCCCAAGAGAGGTaGGAGGCTCATTCATCCGATCGTCACTGCTGCTGGCAATGGCAT +
Preference number: 6 (lower is better)
Translates to: VKEIPGSGEAQAQER*EAHSSDRHCCWQWH
Trigger: ATGCCATTGCCAGCAGCAGTGACGATCGGATGAATGAGCCTCCAACCTCTCTTGGGCTTGTGCCTCACCAGATCCGGGGATTTCTTTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354449.7
ENST00000414717.5
ENST00000427759.5
ENST00000446110.1
ENST00000446450.6
CDS TCA 72 bp CCTGATGGGCGGGGAAGGTGCCATTCTTGGGCCGGATaGAAGAAAGATGATCCTCAGCAGCTTGGGTTTCTT +
Preference number: 6 (lower is better)
Translates to: PDGRGRCHSWAG*KKDDPQQLGFL
Trigger: AAGAAACCCAAGCTGCTGAGGATCATCTTTCTTTCATCCGGCCCAAGAATGGCACCTTCCCCGCCCATCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446110.1
CDS TCA 72 bp GCTTCACATGCCCACAGGGAACGATGTCAAAAGCACTaGACTCCAATGTTAAGCGAGCTGGCAGCCCAGCAG +
Preference number: 6 (lower is better)
Translates to: ASHAHRERCQKH*TPMLSELAAQQ
Trigger: CTGCTGGGCTGCCAGCTCGCTTAACATTGGAGTTCAGTGCTTTTGACATCGTTCCCTGTGGGCATGTGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460444.5
ENST00000469654.2
CDS GCA 72 bp TCGAAGATGATGCTGTGGGCAACGTCTCTCGCCCCCTaGATGGTACGGTCACGGAAGCAAACAACTTCAACA +
Preference number: 6 (lower is better)
Translates to: SKMMLWATSLAP*MVRSRKQTTST
Trigger: TGTTGAAGTTGTTTGCTTCCGTGACCGTACCATGCAGGGGGCGAGAGACGTTGCCCACAGCATCATCTTCGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
ENST00000461278.1
ENST00000478638.5
CDS GCA 72 bp AGGACATACAGGTCTCAGAAATGTCTCTCACAAGGCTaGTCGCCGCTCAACTTCCGGCAACCACAGCTCTCT +
Preference number: 6 (lower is better)
Translates to: RTYRSQKCLSQG*SPLNFRQPQLS
Trigger: AGAGAGCTGTGGTTGCCGGAAGTTGAGCGGCGAGCAGCCTTGTGAGAGACATTTCTGAGACCTGTATGTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451513.5
CDS CCA 72 bp AGGTTGGAGGCTCATTCATCCGATCGTCACTGCTGCTaGCAATGGCATAGCCCCCTTCTGGATGCTGCAAAA +
Preference number: 6 (lower is better)
Translates to: RLEAHSSDRHCC*QWHSPLLDAAK
Trigger: TTTTGCAGCATCCAGAAGGGGGCTATGCCATTGCCAGCAGCAGTGACGATCGGATGAATGAGCCTCCAACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
CDS CAA 90 bp AAGGCTGCTCTAGAAATCCCGGTAGACAAGGTGAAGATACAGGAATaGGATCCGCCGCTCAACTTCCGGCAACCACAGCTCTCTCTGAGG +
Preference number: 6 (lower is better)
Translates to: KAALEIPVDKVKIQE*DPPLNFRQPQLSLR
Trigger: CCTCAGAGAGAGCTGTGGTTGCCGGAAGTTGAGCGGCGGATCCAATTCCTGTATCTTCACCTTGTCTACCGGGATTTCTAGAGCAGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435760.5
CDS TCA 72 bp AAATGCCAGGCTGACGGGAAGGACATTATCAAACCGTaGAAGAAATCCCCGGATCTGGTGAGGCACAAGCCC +
Preference number: 6 (lower is better)
Translates to: KCQADGKDIIKP*KKSPDLVRHKP
Trigger: GGGCTTGTGCCTCACCAGATCCGGGGATTTCTTTCACGGTTTGATAATGTCCTTCCCGTCAGCCTGGCATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354449.7
ENST00000414717.5
ENST00000427759.5
ENST00000446110.1
ENST00000446450.6
CDS GCA 72 bp GCCACAGGGTGGTTTGGACACAAGTCCCCAGCTCCTTaGTGCTTTGGTTTCTTCAGACCATGTCTCATGACA +
Preference number: 6 (lower is better)
Translates to: ATGWFGHKSPAP*CFGFFRPCLMT
Trigger: TGTCATGAGACATGGTCTGAAGAAACCAAAGCAGCAAGGAGCTGGGGACTTGTGTCCAAACCACCCTGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
ENST00000467121.1
CDS CCA 72 bp GTTATACAGTGTTCCAATAGCTGGGCAGCAACGGGCTaGGGTGGGAGCACTCATGTCAAAAGCACTGAACTC +
Preference number: 6 (lower is better)
Translates to: VIQCSNSWAATG*GGSTHVKSTEL
Trigger: GAGTTCAGTGCTTTTGACATGAGTGCTCCCACCCCAGCCCGTTGCTGCCCAGCTATTGGAACACTGTATAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000419112.5
ENST00000423116.1
ENST00000444619.5
ENST00000446450.6
ENST00000451513.5
ENST00000451830.5
CDS CCA 72 bp TGCAGAAGTAGCAGCCAAGCTTGTAACCAGGGATGTTaGCAAAAAGCGATGAGCCCAGGAGGTCAGCAGATG +
Preference number: 6 (lower is better)
Translates to: CRSSSQACNQGC*QKAMSPGGQQM
Trigger: CATCTGCTGACCTCCTGGGCTCATCGCTTTTTGCCAACATCCCTGGTTACAAGCTTGGCTGCTACTTCTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
ENST00000467121.1
CDS CCA 72 bp ACCAAGAACCCACCGGAAGGAACCCCACGAACCCACTaGAAGGAAGAAACTCCAGACACATCTGAAGGAACA +
Preference number: 6 (lower is better)
Translates to: TKNPPEGTPRTH*KEETPDTSEGT
Trigger: TGTTCCTTCAGATGTGTCTGGAGTTTCTTCCTTCCAGTGGGTTCGTGGGGTTCCTTCCGGTGGGTTCTTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460291.1
CDS CAA 72 bp CTAGAAATCCCGGTAGACAAGGTGAAGATACAGGAATaGGATCCGCCGCTCAACTTCCGGCAACCACAGCTC +
Preference number: 6 (lower is better)
Translates to: LEIPVDKVKIQE*DPPLNFRQPQL
Trigger: GAGCTGTGGTTGCCGGAAGTTGAGCGGCGGATCCAATTCCTGTATCTTCACCTTGTCTACCGGGATTTCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435760.5
CDS CAA 90 bp GTTCATATTGATCAAGAACCTGGTGAGGCACAAGCCCAAGAGAGGTaGGAGGCTCATTCATCCGATCGTCACTGCTGCTGGCAATGGCAT +
Preference number: 6 (lower is better)
Translates to: VHIDQEPGEAQAQER*EAHSSDRHCCWQWH
Trigger: ATGCCATTGCCAGCAGCAGTGACGATCGGATGAATGAGCCTCCAACCTCTCTTGGGCTTGTGCCTCACCAGGTTCTTGATCAATATGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354956.9
CDS TCA 72 bp TGTAACACTCACTGCGAAGGTCCGCGGCTTCATTCTTaGAGTCAGCAAGACCAAGAACGCACTGAAGGAACC +
Preference number: 6 (lower is better)
Translates to: CNTHCEGPRLHS*SQQDQERTEGT
Trigger: GGTTCCTTCAGTGCGTTCTTGGTCTTGCTGACTTCAAGAATGAAGCCGCGGACCTTCGCAGTGAGTGTTACA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460291.1
CDS GCA 72 bp ATATCCCAAACAATGAAGTGGGTTGTTACCTCACTCTaGCGACTTCACACTGCCTCTCTCCCAGCCACACTC +
Preference number: 6 (lower is better)
Translates to: ISQTMKWVVTSL*RLHTASLPATL
Trigger: GAGTGTGGCTGGGAGAGAGGCAGTGTGAAGTCGGCAGAGTGAGGTAACAACCCACTTCATTGTTTGGGATAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464282.1
CDS CCA 72 bp GGAGCTTCATCCAGCCGATACTCGTTCAGCTTCTTCTaGGTCAACTCATGCCAAAACCCAACATCCAAGGCA +
Preference number: 6 (lower is better)
Translates to: GASSSRYSFSFF*VNSCQNPTSKA
Trigger: TGCCTTGGATGTTGGGTTTTGGCATGAGTTGACCCAGAAGAAGCTGAACGAGTATCGGCTGGATGAAGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000418682.5
ENST00000419112.5
ENST00000423116.1
ENST00000435760.5
ENST00000444619.5
ENST00000446450.6
ENST00000451513.5
ENST00000451830.5
ENST00000460444.5
ENST00000469654.2
ENST00000470474.1
CDS CCA 72 bp ATGGTACGGTCACGGAAGCAAACAACTTCAACAGACTaGAAACTGCTACTCCATCTGTGGGCTGCTAGGACC +
Preference number: 6 (lower is better)
Translates to: MVRSRKQTTSTD*KLLLHLWAART
Trigger: GGTCCTAGCAGCCCACAGATGGAGTAGCAGTTTCCAGTCTGTTGAAGTTGTTTGCTTCCGTGACCGTACCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
ENST00000478638.5
CDS CAA 72 bp AAAGTGCTGGGGCTGTGTTGCACCAGTTATTTACACTaGGCCAACAGGCAGGCAGGTGGTCAGAACGGAATA +
Preference number: 6 (lower is better)
Translates to: KVLGLCCTSYLH*ANRQAGGQNGI
Trigger: TATTCCGTTCTGACCACCTGCCTGCCTGTTGGCCAAGTGTAAATAACTGGTGCAACACAGCCCCAGCACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460444.5
CDS TCA 72 bp GCTTCATTCTTGAAGTCAGCAAGACCAAGAACGCACTaGAGGAACCAACTCCAGACACACTGGGATTGCAGG +
Preference number: 6 (lower is better)
Translates to: ASFLKSARPRTH*RNQLQTHWDCR
Trigger: CCTGCAATCCCAGTGTGTCTGGAGTTGGTTCCTTCAGTGCGTTCTTGGTCTTGCTGACTTCAAGAATGAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460291.1
CDS TCA 72 bp TGTAACACTCACTGCGAAGGTCTGCAGCTTCATTCTTaGAGTCAGCAAGACCAAGAACCCACCGGAAGGAAC +
Preference number: 6 (lower is better)
Translates to: CNTHCEGLQLHS*SQQDQEPTGRN
Trigger: GTTCCTTCCGGTGGGTTCTTGGTCTTGCTGACTTCAAGAATGAAGCTGCAGACCTTCGCAGTGAGTGTTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460291.1
CDS GCA 72 bp ACAGGGTGGTTTGGACACAAGTCCCCAGCTCCTTGCTaGTTTGGTTTCTTCAGACCATGTCTCATGACAACA +
Preference number: 6 (lower is better)
Translates to: TGWFGHKSPAPC*FGFFRPCLMTT
Trigger: TGTTGTCATGAGACATGGTCTGAAGAAACCAAAGCAGCAAGGAGCTGGGGACTTGTGTCCAAACCACCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
ENST00000467121.1
CDS GCA 72 bp ATACCTGGAGGAATCTACTTCGCACACAGCTTCACATaGCCACAGGGAACGATGTCAAAAGCACTGAACTCC +
Preference number: 6 (lower is better)
Translates to: IPGGIYFAHSFT*PQGTMSKALNS
Trigger: GGAGTTCAGTGCTTTTGACATCGTTCCCTGTGGGCATGTGAAGCTGTGTGCGAAGTAGATTCCTCCAGGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460444.5
CDS CCA 72 bp CACCAGTTATTTACACTTGGCCAACAGGCAGGCAGGTaGTCAGAACGGAATAAATCCTCTGGAAGAGCACCT +
Preference number: 6 (lower is better)
Translates to: HQLFTLGQQAGR*SERNKSSGRAP
Trigger: AGGTGCTCTTCCAGAGGATTTATTCCGTTCTGACCACCTGCCTGCCTGTTGGCCAAGTGTAAATAACTGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460444.5
CDS CAA 90 bp TCCAAAAGGAGCTTCTTATCTGCAGTCTTGAAAGACTCGAGTGTGTaGGTGTTATACAGTGTTCCAATAGCTGGGCAGCAACGGGCTGGG +
Preference number: 6 (lower is better)
Translates to: SKRSFLSAVLKDSSV*VLYSVPIAGQQRAG
Trigger: CCCAGCCCGTTGCTGCCCAGCTATTGGAACACTGTATAACACCAACACACTCGAGTCTTTCAAGACTGCAGATAAGAAGCTCCTTTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000423116.1
ENST00000446450.6
ENST00000451513.5
ENST00000451830.5
CDS CAA 90 bp GCAACCCACTTGGGTCCCCTTCCACGCTGTGGAAGCTTTGTTCTTTaGTTCTTCACAATAAATCTTGCTGCTGCTCACTCTTTGGGTCCA +
Preference number: 6 (lower is better)
Translates to: ATHLGPLPRCGSFVL*FFTINLAAAHSLGP
Trigger: TGGACCCAAAGAGTGAGCAGCAGCAAGATTTATTGTGAAGAACAAAAGAACAAAGCTTCCACAGCGTGGAAGGGGACCCAAGTGGGTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460291.1
CDS TCA 72 bp GCACTGGATACCAGCATTATGGGGTTTGAGAAGCCTTaGTCAGGGAAGAATCATAGACGCAGGACATACAGG +
Preference number: 6 (lower is better)
Translates to: ALDTSIMGFEKP*SGKNHRRRTYR
Trigger: CCTGTATGTCCTGCGTCTATGATTCTTCCCTGATCAAGGCTTCTCAAACCCCATAATGCTGGTATCCAGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435760.5
ENST00000451513.5
CDS GCA 72 bp AAACTGCAGTTTAGAGAGTCCAGGATCCCCCGTAGCTaGCGCCATTATTTCTTGCCAAAAGTTTCTGTCCAC +
Preference number: 6 (lower is better)
Translates to: KLQFRESRIPRS*RHYFLPKVSVH
Trigger: GTGGACAGAAACTTTTGGCAAGAAATAATGGCGGCAGCTACGGGGGATCCTGGACTCTCTAAACTGCAGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000460444.5
ENST00000469654.2
CDS GCA 72 bp GGTCAGAACGGAATAAATCCTCTGGAAGAGCACCTGTaGTCATCATACCTGGAGGAATCTACTTCGCACACA +
Preference number: 6 (lower is better)
Translates to: GQNGINPLEEHL*SSYLEESTSHT
Trigger: TGTGTGCGAAGTAGATTCCTCCAGGTATGATGAGCACAGGTGCTCTTCCAGAGGATTTATTCCGTTCTGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460444.5
CDS CCA 72 bp CTGAGGTTCACCATCCTTGGTCCCATGCCTCCTTTCTaGTTCTTTTCCCATCCAACTGCTTTAGGACAATCT +
Preference number: 6 (lower is better)
Translates to: LRFTILGPMPPF*FFSHPTALGQS
Trigger: AGATTGTCCTAAAGCAGTTGGATGGGAAAAGAACCAGAAAGGAGGCATGGGACCAAGGATGGTGAACCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000424071.5
ENST00000446450.6
ENST00000461278.1
ENST00000478638.5
CDS CCA 72 bp CTGAGGTTCACCATCCTTGGTCCCATGCCTCCTTTCTaGTTCTTTTCCCATCCAACTGCTTTAGGACAATCA +
Preference number: 6 (lower is better)
Translates to: LRFTILGPMPPF*FFSHPTALGQS
Trigger: TGATTGTCCTAAAGCAGTTGGATGGGAAAAGAACCAGAAAGGAGGCATGGGACCAAGGATGGTGAACCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434066.6
CDS CAA 72 bp CAGTTTAAATGGCTAATCATCAACGTCCTAGCTACATaGCAACCCAAGGTGCCGGCTCCAAGCAGCAGACAT +
Preference number: 6 (lower is better)
Translates to: QFKWLIINVLAT*QPKVPAPSSRH
Trigger: ATGTCTGCTGCTTGGAGCCGGCACCTTGGGTTGCAATGTAGCTAGGACGTTGATGATTAGCCATTTAAACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478638.5
CDS CAA 90 bp AATGCTACACAGTTTAAATGGCTAATCATCAACGTCCTAGCTACATaGCAACCCAAGGTGCCGGCTCCAAGCAGCAGACATTTGACAGAC +
Preference number: 6 (lower is better)
Translates to: NATQFKWLIINVLAT*QPKVPAPSSRHLTD
Trigger: GTCTGTCAAATGTCTGCTGCTTGGAGCCGGCACCTTGGGTTGCAATGTAGCTAGGACGTTGATGATTAGCCATTTAAACTGTGTAGCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478638.5
CDS GCA 72 bp AAGATCAAATCCCCACAGGAAATGTGCAGTGGCGGTTaGCTCCCAAGAAAGCTTGATCAGGGAAGAATCATA +
Preference number: 6 (lower is better)
Translates to: KIKSPQEMCSGG*LPRKLDQGRII
Trigger: TATGATTCTTCCCTGATCAAGCTTTCTTGGGAGGCAACCGCCACTGCACATTTCCTGTGGGGATTTGATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469654.2
CDS GCA 72 bp GATTCTTCCGTCCATTTGTTTATGTTCTGCCTCTCCTaGTTCATCCAGAGCCGAAGATCTCAAAGATGCTCA +
Preference number: 6 (lower is better)
Translates to: DSSVHLFMFCLS*FIQSRRSQRCS
Trigger: TGAGCATCTTTGAGATCTTCGGCTCTGGATGAAGCAGGAGAGGCAGAACATAAACAAATGGACGGAAGAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427759.5
CDS GCA 72 bp GAAGTGCTTGATTCTTCCGTCCATTTGTTTATGTTCTaGCTCTCCTGCTTCATCCAGAGCCGAAGATCTCAA +
Preference number: 6 (lower is better)
Translates to: EVLDSSVHLFMF*LSCFIQSRRSQ
Trigger: TTGAGATCTTCGGCTCTGGATGAAGCAGGAGAGGCAGAACATAAACAAATGGACGGAAGAATCAAGCACTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427759.5
CDS GCA 72 bp AGGACATACAGGTCTCAGAAATGTCTCTCACAAGGCTaGTCTAGAAATCCCGGTAGACAAGGTGAAGATACA +
Preference number: 6 (lower is better)
Translates to: RTYRSQKCLSQG*SRNPGRQGEDT
Trigger: TGTATCTTCACCTTGTCTACCGGGATTTCTAGAGCAGCCTTGTGAGAGACATTTCTGAGACCTGTATGTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435760.5
ENST00000469654.2
CDS CCA 72 bp AACTGCTTTAGGACAATCTGGGCTAAATGCCATTTCTaGAAGCTTCACTTCGAAGATGATGCTGTGGGCAAC +
Preference number: 6 (lower is better)
Translates to: NCFRTIWAKCHF*KLHFEDDAVGN
Trigger: GTTGCCCACAGCATCATCTTCGAAGTGAAGCTTCCAGAAATGGCATTTAGCCCAGATTGTCCTAAAGCAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000446450.6
ENST00000461278.1
ENST00000478638.5
CDS CAA 90 bp TCATCATCGCTCATGTCCCAGATTTTGGAAGAACAAGCTGTACATTaGTCAAATGCCAGGCTGACGGGAAGGACATTATCAAACCGTGAA +
Preference number: 6 (lower is better)
Translates to: SSSLMSQILEEQAVH*SNARLTGRTLSNRE
Trigger: TTCACGGTTTGATAATGTCCTTCCCGTCAGCCTGGCATTTGACAAATGTACAGCTTGTTCTTCCAAAATCTGGGACATGAGCGATGATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446450.6
CDS TCA 72 bp AGCTGCCGCCATTATTTCTTGCCTCCAAGCCAACTCTaGATCAACATGATTTCTTCTTCAGTGTGTCAACCA +
Preference number: 6 (lower is better)
Translates to: SCRHYFLPPSQL*INMISSSVCQP
Trigger: TGGTTGACACACTGAAGAAGAAATCATGTTGATTCAGAGTTGGCTTGGAGGCAAGAAATAATGGCGGCAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435760.5
ENST00000444619.5
ENST00000451513.5
CDS CAA 72 bp AGCTTCTTATCTGCAGTCTTGAAAGACTCGAGTGTGTaGGTGTTATACAGTGTTCCAATAGCTGGGCAGCAA +
Preference number: 6 (lower is better)
Translates to: SFLSAVLKDSSV*VLYSVPIAGQQ
Trigger: TTGCTGCCCAGCTATTGGAACACTGTATAACACCAACACACTCGAGTCTTTCAAGACTGCAGATAAGAAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000423116.1
ENST00000446450.6
ENST00000451513.5
ENST00000451830.5
CDS CAA 72 bp CTCATGTCCCAGATTTTGGAAGAACAAGCTGTACATTaGTCAAATGCCAGGCTGACGGGAAGGACATTATCA +
Preference number: 6 (lower is better)
Translates to: LMSQILEEQAVH*SNARLTGRTLS
Trigger: TGATAATGTCCTTCCCGTCAGCCTGGCATTTGACAAATGTACAGCTTGTTCTTCCAAAATCTGGGACATGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446450.6
CDS TCA 72 bp CTGCTTGTTCCAAAAGGAGCTTCTTATCTGCAGTCTTaGAAGACTCGAGTGTGTTGGTGTTATACAGTGTTC +
Preference number: 6 (lower is better)
Translates to: LLVPKGASYLQS*KTRVCWCYTVF
Trigger: GAACACTGTATAACACCAACACACTCGAGTCTTTCAAGACTGCAGATAAGAAGCTCCTTTTGGAACAAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000423116.1
ENST00000446450.6
ENST00000451513.5
ENST00000451830.5
CDS TCA 72 bp TGGAAGAACAAGCTGTACATTTGTCAAATGCCAGGCTaGCGGGAAGGACATTATCAAACCGTGAAAGAAATC +
Preference number: 6 (lower is better)
Translates to: WKNKLYICQMPG*REGHYQTVKEI
Trigger: GATTTCTTTCACGGTTTGATAATGTCCTTCCCGTCAGCCTGGCATTTGACAAATGTACAGCTTGTTCTTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354449.7
ENST00000414717.5
ENST00000427759.5
ENST00000446110.1
ENST00000446450.6
CDS CAA 72 bp GCTGCTTGTTCCAAAAGGAGCTTCTTATCTGCAGTCTaGAAAGACTCGAGTGTGTTGGTGTTATACAGTGTT +
Preference number: 6 (lower is better)
Translates to: AACSKRSFLSAV*KDSSVLVLYSV
Trigger: AACACTGTATAACACCAACACACTCGAGTCTTTCAAGACTGCAGATAAGAAGCTCCTTTTGGAACAAGCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000423116.1
ENST00000446450.6
ENST00000451513.5
ENST00000451830.5
CDS CAA 90 bp GAAAAGGCCATGGGAGACACTGATGAACAACTGCCTACAAAAGCTTaGTTTAAATACTCATCTCCTACTAGCAAACTCACCCTTCTGGAT +
Preference number: 6 (lower is better)
Translates to: EKAMGDTDEQLPTKA*FKYSSPTSKLTLLD
Trigger: ATCCAGAAGGGTGAGTTTGCTAGTAGGAGATGAGTATTTAAACAAAGCTTTTGTAGGCAGTTGTTCATCAGTGTCTCCCATGGCCTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467121.1
CDS GCA 72 bp CTCATTTGCTGCTTGTTCCAAAAGGAGCTTCTTATCTaGAGTCTTGAAAGACTCGAGTGTGTTGGTGTTATA +
Preference number: 6 (lower is better)
Translates to: LICCLFQKELLI*SLERLECVGVI
Trigger: TATAACACCAACACACTCGAGTCTTTCAAGACTGCAGATAAGAAGCTCCTTTTGGAACAAGCAGCAAATGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000423116.1
ENST00000446450.6
ENST00000451513.5
ENST00000451830.5
CDS CAA 90 bp ATCTCATTTGCTGCTTGTTCCAAAAGGAGCTTCTTATCTGCAGTCTaGAAAGACTCGAGTGTGTTGGTGTTATACAGTGTTCCAATAGCT +
Preference number: 6 (lower is better)
Translates to: ISFAACSKRSFLSAV*KDSSVLVLYSVPIA
Trigger: AGCTATTGGAACACTGTATAACACCAACACACTCGAGTCTTTCAAGACTGCAGATAAGAAGCTCCTTTTGGAACAAGCAGCAAATGAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000423116.1
ENST00000446450.6
ENST00000451513.5
ENST00000451830.5
CDS CAA 90 bp AAGTGGTACTTCTTTAGATCTGCAAATGTCAAGAGGAGGAACTTGTaGAGGAGTACAGGGTTTTCAAGAGCAGTGCCTGATTTTATGGAT +
Preference number: 6 (lower is better)
Translates to: KWYFFRSANVKRRNL*RSTGFSRAVPDFMD
Trigger: ATCCATAAAATCAGGCACTGCTCTTGAAAACCCTGTACTCCTCAACAAGTTCCTCCTCTTGACATTTGCAGATCTAAAGAAGTACCACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000418682.5
ENST00000451513.5
ENST00000464282.1
ENST00000488924.5
CDS CAA 90 bp AACACAAATTATACATTCAAGTATGAATGCAAGGAATTGTTCTGCTaGAGAGCTGGTAGAGATCTATTTCAGGACAGGCAGCCGACTCCT +
Preference number: 6 (lower is better)
Translates to: NTNYTFKYECKELFC*RAGRDLFQDRQPTP
Trigger: AGGAGTCGGCTGCCTGTCCTGAAATAGATCTCTACCAGCTCTCAAGCAGAACAATTCCTTGCATTCATACTTGAATGTATAATTTGTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446110.1
CDS TCA 72 bp ATGGCTCCTCTGTCCAAGTGTTTAGAGGCTGAAAAATaGATTGGCTGTGATTTCTTTCTAGGTGATTTCTTT +
Preference number: 6 (lower is better)
Translates to: MAPLSKCLEAEK*IGCDFFLGDFF
Trigger: AAAGAAATCACCTAGAAAGAAATCACAGCCAATTCATTTTTCAGCCTCTAAACACTTGGACAGAGGAGCCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461278.1
CDS GCA 72 bp GTAGAAAGTGACAGATATCTGACTCTCTTTCTTCAATaGCACAGGCCTCATTTCCCAAGACTTAAACATTTA +
Preference number: 6 (lower is better)
Translates to: VESDRYLTLFLQ*HRPHFPRLKHL
Trigger: TAAATGTTTAAGTCTTGGGAAATGAGGCCTGTGGCATTGAAGAAAGAGAGTCAGATATCTGTCACTTTCTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460291.1
CDS CAA 72 bp ATCATATACACCAATTGTTATCTTCGTCCTTTGACCTaGGAAGAAATCACTGTAGTGTTTAAGCAAGGAAAC +
Preference number: 6 (lower is better)
Translates to: IIYTNCYLRPLT*EEITVVFKQGN
Trigger: GTTTCCTTGCTTAAACACTACAGTGATTTCTTCCAAGGTCAAAGGACGAAGATAACAATTGGTGTATATGAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354449.7
ENST00000354956.9
ENST00000434066.6
ENST00000446450.6
ENST00000488924.5