RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ATG5 (Homo sapiens)

Ensembl gene IDs: ENSG00000057663

Ensembl transcript IDs: ENST00000343245.7, ENST00000360666.6, ENST00000369070.5, ENST00000369076.8, ENST00000475645.1, ENST00000476518.1, ENST00000613993.1, ENST00000635758.2, ENST00000636335.1, ENST00000636437.1, ENST00000646025.1

Found 588 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGACCAGCCCAGTTGCCTTATCTGACATGGAATCTTTTTCCTGTCTaGCTTGCAGCAGCGAAGTGTTTCTGGTCAGGTTGCCTCCACCAA +
Preference number: 1 (lower is better)
Translates to: RPAQLPYLTWNLFPV*LAAAKCFWSGCLHQ
Trigger: TTGGTGGAGGCAACCTGACCAGAAACACTTCGCTGCTGCAAGCCAGACAGGAAAAAGATTCCATGTCAGATAAGGCAACTGGGCTGGTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
3UTR CCA 90 bp GGCAGCCCTTTCAGAGGTCCCGAGGAAGTTTCCAGGCGGCTTGAGTaGAAAAGTGAGTATTTCATCACCAGTGCGAGAGTCTTAGTTATC +
Preference number: 1 (lower is better)
Translates to: GSPFRGPEEVSRRLE*KSEYFITSARVLVI
Trigger: GATAACTAAGACTCTCGCACTGGTGATGAAATACTCACTTTTCCACTCAAGCCGCCTGGAAACTTCCTCGGGACCTCTGAAAGGGCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636335.1
3UTR CCA 90 bp GAGGCAGCTGCTGCTAAGGTGGGGTTAGCTTTCAGAAGAAGGAGGTaGTTGGTCTCCAAGGTGATCAAAGCAACTTGTCTTTCATTTCCA +
Preference number: 1 (lower is better)
Translates to: EAAAAKVGLAFRRRR*LVSKVIKATCLSFP
Trigger: TGGAAATGAAAGACAAGTTGCTTTGATCACCTTGGAGACCAACCACCTCCTTCTTCTGAAAGCTAACCCCACCTTAGCAGCAGCTGCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636437.1
3UTR TCA 90 bp CAGCAGCGAAGTGTTTCTGGTCAGGTTGCCTCCACCAAACCTGATTaGAGCAAAAGGGTGACATGCTCTGATAAATCCCATTTAAGGATG +
Preference number: 1 (lower is better)
Translates to: QQRSVSGQVASTKPD*SKRVTCSDKSHLRM
Trigger: CATCCTTAAATGGGATTTATCAGAGCATGTCACCCTTTTGCTTCAATCAGGTTTGGTGGAGGCAACCTGACCAGAAACACTTCGCTGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
3UTR TCA 90 bp ATGTCACAGCTGAGGTTTAATGATGGCAGTGGAGGAAAGCAGAGGTaGTGCAAAGTAAGACCAGCCCAGTTGCCTTATCTGACATGGAAT +
Preference number: 1 (lower is better)
Translates to: MSQLRFNDGSGGKQR*CKVRPAQLPYLTWN
Trigger: ATTCCATGTCAGATAAGGCAACTGGGCTGGTCTTACTTTGCATCACCTCTGCTTTCCTCCACTGCCATCATTAAACCTCAGCTGTGACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
3UTR TCA 90 bp TTACAGAAGACCTTCAGTGGTCCGGTAAGTCTTTCATGTCACAGCTaGGGTTTAATGATGGCAGTGGAGGAAAGCAGAGGTGATGCAAAG +
Preference number: 1 (lower is better)
Translates to: LQKTFSGPVSLSCHS*GLMMAVEESRGDAK
Trigger: CTTTGCATCACCTCTGCTTTCCTCCACTGCCATCATTAAACCTCAGCTGTGACATGAAAGACTTACCGGACCACTGAAGGTCTTCTGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
3UTR-3UTR CCA 90 bp AGTTCTGCTCAGGGGCAGCCCTTTCAGAGGTCCCGAGGAAGTTTCCAGGCGGCTGGCAGGGCTCTGCGCTaGGGAGAGGGAGAGTTCTGC +
Preference number: 2 (lower is better)
Translates to: SSAQGQPFQRSRGSFQAAGRALR*GEGEFC
Trigger: GCAGAACTCTCCCTCTCCCCAGCGCAGAGCCCTGCC...AGCCGCCTGGAAACTTCCTCGGGACCTCTGAAAGGGCTGCCCCTGAGCAGAACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636335.1
ENST00000636437.1
3UTR-3UTR CCA 90 bp CTCAGGGGCAGCCCTTTCAGAGGTCCCGAGGAAGTTTCCAGGCGGCTTGAGTGGATCCACATTCTGGGGTaGGAGAGCAGCCAGTGGCCT +
Preference number: 2 (lower is better)
Translates to: LRGSPFRGPEEVSRRLEWIHILG*ESSQWP
Trigger: AGGCCACTGGCTGCTCTCCCACCCCAGAATGTGGAT...CCACTCAAGCCGCCTGGAAACTTCCTCGGGACCTCTGAAAGGGCTGCCCCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636335.1
ENST00000636437.1
3UTR-3UTR GCA 90 bp CATGTGATCTTCCTGATAGGGCTGTTGACACAGGCCTCTTGTGAAGATCCACATGCAGCCAGTGGCCTCTaGCCGGCAGGGCTCTGCGCT +
Preference number: 2 (lower is better)
Translates to: HVIFLIGLLTQASCEDPHAASGL*PAGLCA
Trigger: AGCGCAGAGCCCTGCCGGGCAGAGGCCACTGGCTGC...ATGTGGATCTTCACAAGAGGCCTGTGTCAACAGCCCTATCAGGAAGATCACATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636335.1
ENST00000636437.1
3UTR-3UTR CCA 90 bp TTCCCCACCAAGGTTCATGAGATAGATGCAGAGCCTACTCCGTATCCTCATGGGGGCAGGGCTCTGCGCTaGGGAGAGGGAGAGTTCTGC +
Preference number: 2 (lower is better)
Translates to: FPTKVHEIDAEPTPYPHGGRALR*GEGEFC
Trigger: GCAGAACTCTCCCTCTCCCCAGCGCAGAGCCCTGCC...CCCATGAGGATACGGAGTAGGCTCTGCATCTATCTCATGAACCTTGGTGGGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636437.1
3UTR-3UTR GCA 90 bp AGAGTTCTGCTCAGGGGCAGCCCTTTCAGAGGTCCCGAGGAAGTTTCCAGGCGGCCTTGGCTGGGCTTTTaGAGTTGTGTTTACACCAAC +
Preference number: 2 (lower is better)
Translates to: RVLLRGSPFRGPEEVSRRPWLGF*SCVYTN
Trigger: GTTGGTGTAAACACAACTGCAAAAGCCCAGCCAAGG...CCGCCTGGAAACTTCCTCGGGACCTCTGAAAGGGCTGCCCCTGAGCAGAACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636335.1
3UTR-3UTR TCA 90 bp ATTGGTCATGACCACCGACACACCGGCAGGAAGGAGACAAAGGCTGTGTCATGTGACACAGGCCTCTTGTaGAGATCCACATTCTGGGGT +
Preference number: 2 (lower is better)
Translates to: IGHDHRHTGRKETKAVSCDTGLL*RSTFWG
Trigger: ACCCCAGAATGTGGATCTTCACAAGAGGCCTGTGTC...ACATGACACAGCCTTTGTCTCCTTCCTGCCGGTGTGTCGGTGGTCATGACCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636437.1
3UTR CAA 90 bp GGAAGGAGACAAAGGCTGTGTCATGTGATCTTCCTGATAGGGCTGTaGACACAGGCCTCTTGTGAAGATCCACATTCTGGGGTGGGAGAG +
Preference number: 2 (lower is better)
Translates to: GRRQRLCHVIFLIGL*TQASCEDPHSGVGE
Trigger: CTCTCCCACCCCAGAATGTGGATCTTCACAAGAGGCCTGTGTCAACAGCCCTATCAGGAAGATCACATGACACAGCCTTTGTCTCCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636335.1
ENST00000636437.1
3UTR-3UTR TCA 90 bp TTCCTGATAGGGCTGTTGACACAGGCCTCTTGTGAAGATCCACATTCTGGGGTGGACACAGGCCTCTTGTaGAGATCCACATTCTGGGGT +
Preference number: 2 (lower is better)
Translates to: FLIGLLTQASCEDPHSGVDTGLL*RSTFWG
Trigger: ACCCCAGAATGTGGATCTTCACAAGAGGCCTGTGTC...CACCCCAGAATGTGGATCTTCACAAGAGGCCTGTGTCAACAGCCCTATCAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636335.1
ENST00000636437.1
3UTR-3UTR CCA 90 bp AGCGAAGTGTTTCTGGTCAGGTTGCCTCCACCAAACCTGATTGAAGCAAAAGGGGCAGCGAAGTGTTTCTaGTCAGGTTGCCTCCACCAA +
Preference number: 2 (lower is better)
Translates to: SEVFLVRLPPPNLIEAKGAAKCF*SGCLHQ
Trigger: TTGGTGGAGGCAACCTGACCAGAAACACTTCGCTGC...CCCTTTTGCTTCAATCAGGTTTGGTGGAGGCAACCTGACCAGAAACACTTCGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
3UTR-3UTR CCA 90 bp CTGTCTGGCTTGCAGCAGCGAAGTGTTTCTGGTCAGGTTGCCTCCACCAAACCTACAGAAGACCTTCAGTaGTCCGGTAAGTCTTTCATG +
Preference number: 2 (lower is better)
Translates to: LSGLQQRSVSGQVASTKPTEDLQ*SGKSFM
Trigger: CATGAAAGACTTACCGGACCACTGAAGGTCTTCTGT...AGGTTTGGTGGAGGCAACCTGACCAGAAACACTTCGCTGCTGCAAGCCAGACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
3UTR-3UTR TCA 90 bp TGGCAGTGGAGGAAAGCAGAGGTGATGCAAAGTAAGACCAGCCCAGTTGCCTTATCCACCAAACCTGATTaGAGCAAAAGGGTGACATGC +
Preference number: 2 (lower is better)
Translates to: WQWRKAEVMQSKTSPVALSTKPD*SKRVTC
Trigger: GCATGTCACCCTTTTGCTTCAATCAGGTTTGGTGGA...TAAGGCAACTGGGCTGGTCTTACTTTGCATCACCTCTGCTTTCCTCCACTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
3UTR-3UTR TCA 90 bp CTGGCTGCCAGGGACCACAGTGAAAAATTAGACCTGGAGCCAATGAAAAACACTTGCCTCCACCAAACCTaGTTGAAGCAAAAGGGTGAC +
Preference number: 2 (lower is better)
Translates to: LAARDHSEKLDLEPMKNTCLHQT*LKQKGD
Trigger: GTCACCCTTTTGCTTCAATCAGGTTTGGTGGAGGCA...AGTGTTTTTCATTGGCTCCAGGTCTAATTTTTCACTGTGGTCCCTGGCAGCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
3UTR-3UTR TCA 90 bp AAAGCAGAGGTGATGCAAAGTAAGACCAGCCCAGTTGCCTTATCTGACATGGAAGGAGGAAAGCAGAGGTaGTGCAAAGTAAGACCAGCC +
Preference number: 2 (lower is better)
Translates to: KAEVMQSKTSPVALSDMEGGKQR*CKVRPA
Trigger: GGCTGGTCTTACTTTGCATCACCTCTGCTTTCCTCC...TTCCATGTCAGATAAGGCAACTGGGCTGGTCTTACTTTGCATCACCTCTGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
3UTR-3UTR CCA 90 bp TTCAGAGGTCCCGAGGAAGTTTCCAGGCGGCTTGAGTGGAAAAGTGAGTATTTCTCTGATGCCCTTGGCTaGGCTTTTGCAGTTGTGTTT +
Preference number: 2 (lower is better)
Translates to: FRGPEEVSRRLEWKSEYFSDALG*AFAVVF
Trigger: AAACACAACTGCAAAAGCCCAGCCAAGGGCATCAGA...GAAATACTCACTTTTCCACTCAAGCCGCCTGGAAACTTCCTCGGGACCTCTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636335.1
3UTR-3UTR TCA 90 bp AAAGCAGAGGTGATGCAAAGTAAGACCAGCCCAGTTGCCTTATCTGACATGGAATGCCTCCACCAAACCTaGTTGAAGCAAAAGGGTGAC +
Preference number: 2 (lower is better)
Translates to: KAEVMQSKTSPVALSDMECLHQT*LKQKGD
Trigger: GTCACCCTTTTGCTTCAATCAGGTTTGGTGGAGGCA...TTCCATGTCAGATAAGGCAACTGGGCTGGTCTTACTTTGCATCACCTCTGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
3UTR-3UTR TCA 90 bp AAAGTAAGACCAGCCCAGTTGCCTTATCTGACATGGAATCTTTTTCCTGTCTGGGGAGGAAAGCAGAGGTaGTGCAAAGTAAGACCAGCC +
Preference number: 2 (lower is better)
Translates to: KVRPAQLPYLTWNLFPVWGGKQR*CKVRPA
Trigger: GGCTGGTCTTACTTTGCATCACCTCTGCTTTCCTCC...CCAGACAGGAAAAAGATTCCATGTCAGATAAGGCAACTGGGCTGGTCTTACTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
3UTR-3UTR TCA 90 bp TTCCTGATAGGGCTGTTGACACAGGCCTCTTGTGAAGATCCACATTCTGGGGTGCAGCTAGAATATAGATaGAGCATTTTTCCTCCCCTG +
Preference number: 2 (lower is better)
Translates to: FLIGLLTQASCEDPHSGVQLEYR*SIFPPL
Trigger: CAGGGGAGGAAAAATGCTTCATCTATATTCTAGCTG...CACCCCAGAATGTGGATCTTCACAAGAGGCCTGTGTCAACAGCCCTATCAGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000636437.1
3UTR-3UTR TCA 90 bp TCCAGGCGGCTTGAGTGGAAAAGTGAGTATTTCATCACCAGTGCGAGAGTCTTAATGTGTTCCATTTTCTaGTGCCCTTGGCTGGGCTTT +
Preference number: 2 (lower is better)
Translates to: SRRLEWKSEYFITSARVLMCSIF*CPWLGF
Trigger: AAAGCCCAGCCAAGGGCATCAGAAAATGGAACACAT...TAAGACTCTCGCACTGGTGATGAAATACTCACTTTTCCACTCAAGCCGCCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636335.1
3UTR-3UTR GCA 90 bp AAAGCAGAGGTGATGCAAAGTAAGACCAGCCCAGTTGCCTTATCTGACATGGAAAGATCTCCTAGTGTGTaGAACTGTCCATCTGCAGCC +
Preference number: 2 (lower is better)
Translates to: KAEVMQSKTSPVALSDMERSPSV*NCPSAA
Trigger: GGCTGCAGATGGACAGTTGCACACACTAGGAGATCT...TTCCATGTCAGATAAGGCAACTGGGCTGGTCTTACTTTGCATCACCTCTGCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369070.5
ENST00000646025.1
3UTR-3UTR CCA 90 bp CTGTCTGGCTTGCAGCAGCGAAGTGTTTCTGGTCAGGTTGCCTCCACCAAACCTTCAATCTGTTGGCTGTaGGATGATACTAATATGAAG +
Preference number: 2 (lower is better)
Translates to: LSGLQQRSVSGQVASTKPSICWL*DDTNMK
Trigger: CTTCATATTAGTATCATCCCACAGCCAACAGATTGA...AGGTTTGGTGGAGGCAACCTGACCAGAAACACTTCGCTGCTGCAAGCCAGACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360666.6
ENST00000369070.5
ENST00000646025.1
3UTR-3UTR CCA 90 bp AGAGGTCCCGAGGAAGTTTCCAGGCGGCTTGAGTGGAAAAGTGAGTATTTCATCTCCAGGCGGCTTGAGTaGAAAAGTGAGTATTTCATC +
Preference number: 2 (lower is better)
Translates to: RGPEEVSRRLEWKSEYFISRRLE*KSEYFI
Trigger: GATGAAATACTCACTTTTCCACTCAAGCCGCCTGGA...GATGAAATACTCACTTTTCCACTCAAGCCGCCTGGAAACTTCCTCGGGACCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636335.1
ENST00000636437.1
3UTR-3UTR CCA 90 bp AGGCTGTGTCATGTGATCTTCCTGATAGGGCTGTTGACACAGGCCTCTTGTGAATCCAGGCGGCTTGAGTaGAAAAGTGAGTATTTCATC +
Preference number: 2 (lower is better)
Translates to: RLCHVIFLIGLLTQASCESRRLE*KSEYFI
Trigger: GATGAAATACTCACTTTTCCACTCAAGCCGCCTGGA...TTCACAAGAGGCCTGTGTCAACAGCCCTATCAGGAAGATCACATGACACAGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636335.1
ENST00000636437.1
3UTR-3UTR TCA 90 bp TCAAATCTAGATCAGAAGTTCACTCAAGCCTACTGCAAAGGCCTGACACTGGTTTCCACCCCATGCCAATaGCGACCAGTCAAAATGGTA +
Preference number: 2 (lower is better)
Translates to: SNLDQKFTQAYCKGLTLVSTPCQ*RPVKMV
Trigger: TACCATTTTGACTGGTCGTCATTGGCATGGGGTGGA...AACCAGTGTCAGGCCTTTGCAGTAGGCTTGAGTGAACTTCTGATCTAGATTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
3UTR-3UTR TCA 90 bp ATGCAAAGTAAGACCAGCCCAGTTGCCTTATCTGACATGGAATCTTTTTCCTGTTGCCTCCACCAAACCTaGTTGAAGCAAAAGGGTGAC +
Preference number: 2 (lower is better)
Translates to: MQSKTSPVALSDMESFSCCLHQT*LKQKGD
Trigger: GTCACCCTTTTGCTTCAATCAGGTTTGGTGGAGGCA...ACAGGAAAAAGATTCCATGTCAGATAAGGCAACTGGGCTGGTCTTACTTTGCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
3UTR-3UTR TCA 90 bp CTGGCTGCCAGGGACCACAGTGAAAAATTAGACCTGGAGCCAATGAAAAACACTAACCATGATCGTGTCTaGTACTGTAAGCCTTTTAGC +
Preference number: 2 (lower is better)
Translates to: LAARDHSEKLDLEPMKNTNHDRV*YCKPFS
Trigger: GCTAAAAGGCTTACAGTATCAGACACGATCATGGTT...AGTGTTTTTCATTGGCTCCAGGTCTAATTTTTCACTGTGGTCCCTGGCAGCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
3UTR-3UTR CCA 90 bp ATGGGATCTAAAACCATGATCGTGTCTGATACTGTAAGCCTTTTAGCGTACTCAGCAGCGAAGTGTTTCTaGTCAGGTTGCCTCCACCAA +
Preference number: 2 (lower is better)
Translates to: MGSKTMIVSDTVSLLAYSAAKCF*SGCLHQ
Trigger: TTGGTGGAGGCAACCTGACCAGAAACACTTCGCTGC...TGAGTACGCTAAAAGGCTTACAGTATCAGACACGATCATGGTTTTAGATCCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
3UTR-3UTR TCA 90 bp CTGGCTGCCAGGGACCACAGTGAAAAATTAGACCTGGAGCCAATGAAAAACACTATGTTTCCACTTTCATaGGCTAAAGTTCAACCATGG +
Preference number: 2 (lower is better)
Translates to: LAARDHSEKLDLEPMKNTMFPLS*AKVQPW
Trigger: CCATGGTTGAACTTTAGCTCATGAAAGTGGAAACAT...AGTGTTTTTCATTGGCTCCAGGTCTAATTTTTCACTGTGGTCCCTGGCAGCCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
3UTR-3UTR CCA 90 bp GCTTCATTATATTTTACAGAAGACCTTCAGTGGTCCGGTAAGTCTTTCATGTCAGCAGCGAAGTGTTTCTaGTCAGGTTGCCTCCACCAA +
Preference number: 2 (lower is better)
Translates to: ASLYFTEDLQWSGKSFMSAAKCF*SGCLHQ
Trigger: TTGGTGGAGGCAACCTGACCAGAAACACTTCGCTGC...TGACATGAAAGACTTACCGGACCACTGAAGGTCTTCTGTAAAATATAATGAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
3UTR-3UTR CCA 90 bp GTTTCAGCTTCATTATATTTTACAGAAGACCTTCAGTGGTCCGGTAAGTCTTTCGCAGCGAAGTGTTTCTaGTCAGGTTGCCTCCACCAA +
Preference number: 2 (lower is better)
Translates to: VSASLYFTEDLQWSGKSFAAKCF*SGCLHQ
Trigger: TTGGTGGAGGCAACCTGACCAGAAACACTTCGCTGC...GAAAGACTTACCGGACCACTGAAGGTCTTCTGTAAAATATAATGAAGCTGAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
3UTR-3UTR CCA 90 bp GAAGACCTTCAGTGGTCCGGTAAGTCTTTCATGTCACAGCTGAGGTTTAATGATACAGAAGACCTTCAGTaGTCCGGTAAGTCTTTCATG +
Preference number: 2 (lower is better)
Translates to: EDLQWSGKSFMSQLRFNDTEDLQ*SGKSFM
Trigger: CATGAAAGACTTACCGGACCACTGAAGGTCTTCTGT...ATCATTAAACCTCAGCTGTGACATGAAAGACTTACCGGACCACTGAAGGTCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
3UTR-3UTR TCA 90 bp TCTGATACTGTAAGCCTTTTAGCGTACTCAAATGGGTCAACATTCAATATGGACTGCCTCCACCAAACCTaGTTGAAGCAAAAGGGTGAC +
Preference number: 2 (lower is better)
Translates to: SDTVSLLAYSNGSTFNMDCLHQT*LKQKGD
Trigger: GTCACCCTTTTGCTTCAATCAGGTTTGGTGGAGGCA...GTCCATATTGAATGTTGACCCATTTGAGTACGCTAAAAGGCTTACAGTATCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
3UTR-3UTR TCA 90 bp AGGGTGACATGCTCTGATAAATCCCATTTAAGGATGATTCTGTTCAGGCAAATATGCCTCCACCAAACCTaGTTGAAGCAAAAGGGTGAC +
Preference number: 2 (lower is better)
Translates to: RVTCSDKSHLRMILFRQICLHQT*LKQKGD
Trigger: GTCACCCTTTTGCTTCAATCAGGTTTGGTGGAGGCA...TATTTGCCTGAACAGAATCATCCTTAAATGGGATTTATCAGAGCATGTCACCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
3UTR-3UTR TCA 90 bp TTTCATGAGCTAAAGTTCAACCATGGTCACCTTAGGAAATACCCCTGTTTATTTGGAGGAAAGCAGAGGTaGTGCAAAGTAAGACCAGCC +
Preference number: 2 (lower is better)
Translates to: FHELKFNHGHLRKYPCLFGGKQR*CKVRPA
Trigger: GGCTGGTCTTACTTTGCATCACCTCTGCTTTCCTCC...AAATAAACAGGGGTATTTCCTAAGGTGACCATGGTTGAACTTTAGCTCATGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
3UTR-3UTR TCA 90 bp ATGACAGCTTCTGAGACAAGTAATCCTATGCCCTATATCCACCCCATGCCAATGATGTTTCCACTTTCATaGGCTAAAGTTCAACCATGG +
Preference number: 2 (lower is better)
Translates to: MTASETSNPMPYIHPMPMMFPLS*AKVQPW
Trigger: CCATGGTTGAACTTTAGCTCATGAAAGTGGAAACAT...CATTGGCATGGGGTGGATATAGGGCATAGGATTACTTGTCTCAGAAGCTGTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
3UTR-3UTR CCA 90 bp AAAGCAGAGGTGATGCAAAGTAAGACCAGCCCAGTTGCCTTATCTGACATGGAATTGCCTTATCTGACATaGAATCTTTTTCCTGTCTGG +
Preference number: 2 (lower is better)
Translates to: KAEVMQSKTSPVALSDMELPYLT*NLFPVW
Trigger: CCAGACAGGAAAAAGATTCCATGTCAGATAAGGCAA...TTCCATGTCAGATAAGGCAACTGGGCTGGTCTTACTTTGCATCACCTCTGCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
3UTR CAA 90 bp ATCAATGTGTTCCATTTTCTGATGCCCTTGGCTGGGCTTTTGCAGTaGTGTTTACACCAACTCATAGACATTTATCTTCTTCGCCTATGG +
Preference number: 2 (lower is better)
Translates to: INVFHFLMPLAGLLQ*CLHQLIDIYLLRLW
Trigger: CCATAGGCGAAGAAGATAAATGTCTATGAGTTGGTGTAAACACAACTGCAAAAGCCCAGCCAAGGGCATCAGAAAATGGAACACATTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636335.1
3UTR-3UTR TCA 90 bp ATGCAAAGTAAGACCAGCCCAGTTGCCTTATCTGACATGGAATCTTTTTCCTGTATTGAAGCAAAAGGGTaGCATGCTCTGATAAATCCC +
Preference number: 2 (lower is better)
Translates to: MQSKTSPVALSDMESFSCIEAKG*HALINP
Trigger: GGGATTTATCAGAGCATGTCACCCTTTTGCTTCAAT...ACAGGAAAAAGATTCCATGTCAGATAAGGCAACTGGGCTGGTCTTACTTTGCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
3UTR-3UTR TCA 90 bp AATACAAATCGAGTGGCACATACTTCCATTTTCTTCTTAGGCCAAAGGTTTCAGTCCACCAAACCTGATTaGAGCAAAAGGGTGACATGC +
Preference number: 2 (lower is better)
Translates to: NTNRVAHTSIFFLGQRFQSTKPD*SKRVTC
Trigger: GCATGTCACCCTTTTGCTTCAATCAGGTTTGGTGGA...CTGAAACCTTTGGCCTAAGAAGAAAATGGAAGTATGTGCCACTCGATTTGTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
3UTR-3UTR TCA 90 bp TGGGTCAACATTCAATATGGACAGCCAGCTAGCTCACAAGAAATGAAATGTAATTCCACCAAACCTGATTaGAGCAAAAGGGTGACATGC +
Preference number: 2 (lower is better)
Translates to: WVNIQYGQPASSQEMKCNSTKPD*SKRVTC
Trigger: GCATGTCACCCTTTTGCTTCAATCAGGTTTGGTGGA...ATTACATTTCATTTCTTGTGAGCTAGCTGGCTGTCCATATTGAATGTTGACCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
3UTR-3UTR TCA 90 bp TACCCCTGTTTATTTGTTAATCAGAAATACAAATCGAGTGGCACATACTTCCATGGAGGAAAGCAGAGGTaGTGCAAAGTAAGACCAGCC +
Preference number: 2 (lower is better)
Translates to: YPCLFVNQKYKSSGTYFHGGKQR*CKVRPA
Trigger: GGCTGGTCTTACTTTGCATCACCTCTGCTTTCCTCC...ATGGAAGTATGTGCCACTCGATTTGTATTTCTGATTAACAAATAAACAGGGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
3UTR-3UTR TCA 90 bp TCAAATCTAGATCAGAAGTTCACTCAAGCCTACTGCAAAGGCCTGACACTGGTTATGCTTAGGATACTATaGTTTGACAGGCTTACAGTG +
Preference number: 2 (lower is better)
Translates to: SNLDQKFTQAYCKGLTLVMLRIL*FDRLTV
Trigger: CACTGTAAGCCTGTCAAATCATAGTATCCTAAGCAT...AACCAGTGTCAGGCCTTTGCAGTAGGCTTGAGTGAACTTCTGATCTAGATTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
3UTR-3UTR TCA 90 bp TCAAATCTAGATCAGAAGTTCACTCAAGCCTACTGCAAAGGCCTGACACTGGTTATGCACAAATATGTTTaGCTGGTAAAATCCCAGAGG +
Preference number: 2 (lower is better)
Translates to: SNLDQKFTQAYCKGLTLVMHKYV*LVKSQR
Trigger: CCTCTGGGATTTTACCAGTCAAACATATTTGTGCAT...AACCAGTGTCAGGCCTTTGCAGTAGGCTTGAGTGAACTTCTGATCTAGATTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
3UTR-3UTR TCA 90 bp ATGCAAAGTAAGACCAGCCCAGTTGCCTTATCTGACATGGAATCTTTTTCCTGTGAAACAGCTTCTGAATaGAAGGTCTTTCAGTCGTTG +
Preference number: 2 (lower is better)
Translates to: MQSKTSPVALSDMESFSCETASE*KVFQSL
Trigger: CAACGACTGAAAGACCTTTCATTCAGAAGCTGTTTC...ACAGGAAAAAGATTCCATGTCAGATAAGGCAACTGGGCTGGTCTTACTTTGCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369070.5
ENST00000646025.1
3UTR-3UTR GCA 90 bp GATACTGTAAGCCTTTTAGCGTACTCAAATGGGTCAACATTCAATATGGACAGCAGACAAGTAATCCTATaGCCTATATCCACCCCATGC +
Preference number: 2 (lower is better)
Translates to: DTVSLLAYSNGSTFNMDSRQVIL*PISTPC
Trigger: GCATGGGGTGGATATAGGGCATAGGATTACTTGTCT...GCTGTCCATATTGAATGTTGACCCATTTGAGTACGCTAAAAGGCTTACAGTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
3UTR-3UTR GCA 90 bp GATACTGTAAGCCTTTTAGCGTACTCAAATGGGTCAACATTCAATATGGACAGCTGTTCACTCAGCCACTaGAGAGGTGTTTCCAACATT +
Preference number: 2 (lower is better)
Translates to: DTVSLLAYSNGSTFNMDSCSLSH*RGVSNI
Trigger: AATGTTGGAAACACCTCTGCAGTGGCTGAGTGAACA...GCTGTCCATATTGAATGTTGACCCATTTGAGTACGCTAAAAGGCTTACAGTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360666.6
ENST00000369070.5
3UTR-3UTR CCA 90 bp ACCCCTGTTTATTTGTTAATCAGAAATACAAATCGAGTGGCACATACTTCCATTGCAGCGAAGTGTTTCTaGTCAGGTTGCCTCCACCAA +
Preference number: 2 (lower is better)
Translates to: TPVYLLIRNTNRVAHTSIAAKCF*SGCLHQ
Trigger: TTGGTGGAGGCAACCTGACCAGAAACACTTCGCTGC...AATGGAAGTATGTGCCACTCGATTTGTATTTCTGATTAACAAATAAACAGGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
3UTR-3UTR CCA 90 bp TCAAATCTAGATCAGAAGTTCACTCAAGCCTACTGCAAAGGCCTGACACTGGTTTTGCCTTATCTGACATaGAATCTTTTTCCTGTCTGG +
Preference number: 2 (lower is better)
Translates to: SNLDQKFTQAYCKGLTLVLPYLT*NLFPVW
Trigger: CCAGACAGGAAAAAGATTCCATGTCAGATAAGGCAA...AACCAGTGTCAGGCCTTTGCAGTAGGCTTGAGTGAACTTCTGATCTAGATTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
3UTR-3UTR CCA 90 bp CTTCAGTGGTCCGGTAAGTCTTTCATGTCACAGCTGAGGTTTAATGATGGCAGTAGGTGTTTCCAACATTaGCTCAATTCCATGAATCAT +
Preference number: 2 (lower is better)
Translates to: LQWSGKSFMSQLRFNDGSRCFQH*LNSMNH
Trigger: ATGATTCATGGAATTGAGCCAATGTTGGAAACACCT...ACTGCCATCATTAAACCTCAGCTGTGACATGAAAGACTTACCGGACCACTGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360666.6
ENST00000369070.5
ENST00000646025.1
3UTR-3UTR CCA 90 bp GAAGACCTTCAGTGGTCCGGTAAGTCTTTCATGTCACAGCTGAGGTTTAATGATAATTGCATCCTTAGATaGACAGTGCAGAAGGTCTTT +
Preference number: 2 (lower is better)
Translates to: EDLQWSGKSFMSQLRFNDNCILR*TVQKVF
Trigger: AAAGACCTTCTGCACTGTCCATCTAAGGATGCAATT...ATCATTAAACCTCAGCTGTGACATGAAAGACTTACCGGACCACTGAAGGTCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369070.5
3UTR-3UTR CCA 90 bp TTCAAATCTAGATCAGAAGTTCACTCAAGCCTACTGCAAAGGCCTGACACTGGTTTGATGGCCCAAAACTaGTCAAATCTGTCATTTTGC +
Preference number: 2 (lower is better)
Translates to: FKSRSEVHSSLLQRPDTGLMAQN*SNLSFC
Trigger: GCAAAATGACAGATTTGACCAGTTTTGGGCCATCAA...ACCAGTGTCAGGCCTTTGCAGTAGGCTTGAGTGAACTTCTGATCTAGATTTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369070.5
3UTR-3UTR TCA 90 bp GTGACATGCTCTGATAAATCCCATTTAAGGATGATTCTGTTCAGGCAAATAGTTTCCACCAAACCTGATTaGAGCAAAAGGGTGACATGC +
Preference number: 2 (lower is better)
Translates to: VTCSDKSHLRMILFRQIVSTKPD*SKRVTC
Trigger: GCATGTCACCCTTTTGCTTCAATCAGGTTTGGTGGA...AACTATTTGCCTGAACAGAATCATCCTTAAATGGGATTTATCAGAGCATGTCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
3UTR-3UTR TCA 90 bp TTTCATGAGCTAAAGTTCAACCATGGTCACCTTAGGAAATACCCCTGTTTATTTTCCACCAAACCTGATTaGAGCAAAAGGGTGACATGC +
Preference number: 2 (lower is better)
Translates to: FHELKFNHGHLRKYPCLFSTKPD*SKRVTC
Trigger: GCATGTCACCCTTTTGCTTCAATCAGGTTTGGTGGA...AAATAAACAGGGGTATTTCCTAAGGTGACCATGGTTGAACTTTAGCTCATGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
3UTR-3UTR TCA 90 bp ATCTCTCACTGTTCATTATCAAAGTTACAAGATTGCATACCAATAGACAGACTGTCCACCCCATGCCAATaGCGACCAGTCAAAATGGTA +
Preference number: 2 (lower is better)
Translates to: ISHCSLSKLQDCIPIDRLSTPCQ*RPVKMV
Trigger: TACCATTTTGACTGGTCGTCATTGGCATGGGGTGGA...CAGTCTGTCTATTGGTATGCAATCTTGTAACTTTGATAATGAACAGTGAGAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
3UTR-3UTR TCA 90 bp GTTTCAGCTTCATTATATTTTACAGAAGACCTTCAGTGGTCCGGTAAGTCTTTCGGACGAAACAGCTTCTaGATGAAAGGTCTTTCAGTC +
Preference number: 2 (lower is better)
Translates to: VSASLYFTEDLQWSGKSFGRNSF*MKGLSV
Trigger: GACTGAAAGACCTTTCATTCAGAAGCTGTTTCGTCC...GAAAGACTTACCGGACCACTGAAGGTCTTCTGTAAAATATAATGAAGCTGAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369070.5
ENST00000646025.1
3UTR-3UTR TCA 90 bp GATACTGTAAGCCTTTTAGCGTACTCAAATGGGTCAACATTCAATATGGACAGCAAGGACAAACTTCTTTaGGGAGATCTCCTAGTGTGT +
Preference number: 2 (lower is better)
Translates to: DTVSLLAYSNGSTFNMDSKDKLL*GDLLVC
Trigger: ACACACTAGGAGATCTCCTCAAAGAAGTTTGTCCTT...GCTGTCCATATTGAATGTTGACCCATTTGAGTACGCTAAAAGGCTTACAGTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369070.5
3UTR-3UTR GCA 90 bp TCTGATACTGTAAGCCTTTTAGCGTACTCAAATGGGTCAACATTCAATATGGACAGACAAGTAATCCTATaGCCTATATCCACCCCATGC +
Preference number: 2 (lower is better)
Translates to: SDTVSLLAYSNGSTFNMDRQVIL*PISTPC
Trigger: GCATGGGGTGGATATAGGGCATAGGATTACTTGTCT...GTCCATATTGAATGTTGACCCATTTGAGTACGCTAAAAGGCTTACAGTATCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
3UTR-3UTR GCA 90 bp ATGACAGCTTCTGAGACAAGTAATCCTATGCCCTATATCCACCCCATGCCAATGGGCTTGGTAATAAAGTaGAGCAAACTTTCCTTATAT +
Preference number: 2 (lower is better)
Translates to: MTASETSNPMPYIHPMPMGLVIK*SKLSLY
Trigger: ATATAAGGAAAGTTTGCTGCACTTTATTACCAAGCC...CATTGGCATGGGGTGGATATAGGGCATAGGATTACTTGTCTCAGAAGCTGTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
3UTR-3UTR GCA 90 bp ATCTCTCACTGTTCATTATCAAAGTTACAAGATTGCATACCAATAGACAGACTGAGATCTCCTAGTGTGTaGAACTGTCCATCTGCAGCC +
Preference number: 2 (lower is better)
Translates to: ISHCSLSKLQDCIPIDRLRSPSV*NCPSAA
Trigger: GGCTGCAGATGGACAGTTGCACACACTAGGAGATCT...CAGTCTGTCTATTGGTATGCAATCTTGTAACTTTGATAATGAACAGTGAGAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369070.5
ENST00000646025.1
3UTR-3UTR CCA 90 bp AGGGTGACATGCTCTGATAAATCCCATTTAAGGATGATTCTGTTCAGGCAAATAACAGAAGACCTTCAGTaGTCCGGTAAGTCTTTCATG +
Preference number: 2 (lower is better)
Translates to: RVTCSDKSHLRMILFRQITEDLQ*SGKSFM
Trigger: CATGAAAGACTTACCGGACCACTGAAGGTCTTCTGT...TATTTGCCTGAACAGAATCATCCTTAAATGGGATTTATCAGAGCATGTCACCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
3UTR-3UTR CCA 90 bp TCTGATACTGTAAGCCTTTTAGCGTACTCAAATGGGTCAACATTCAATATGGACACAGAAGACCTTCAGTaGTCCGGTAAGTCTTTCATG +
Preference number: 2 (lower is better)
Translates to: SDTVSLLAYSNGSTFNMDTEDLQ*SGKSFM
Trigger: CATGAAAGACTTACCGGACCACTGAAGGTCTTCTGT...GTCCATATTGAATGTTGACCCATTTGAGTACGCTAAAAGGCTTACAGTATCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
3UTR-3UTR CCA 90 bp TCAAATCTAGATCAGAAGTTCACTCAAGCCTACTGCAAAGGCCTGACACTGGTTCCATTCCAGAATATCTaGTCTTTGACCAACTTTATC +
Preference number: 2 (lower is better)
Translates to: SNLDQKFTQAYCKGLTLVPFQNI*SLTNFI
Trigger: GATAAAGTTGGTCAAAGACCAGATATTCTGGAATGG...AACCAGTGTCAGGCCTTTGCAGTAGGCTTGAGTGAACTTCTGATCTAGATTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
3UTR-3UTR CCA 90 bp AAAGTAAGACCAGCCCAGTTGCCTTATCTGACATGGAATCTTTTTCCTGTCTGGAGGTGTTTCCAACATTaGCTCAATTCCATGAATCAT +
Preference number: 2 (lower is better)
Translates to: KVRPAQLPYLTWNLFPVWRCFQH*LNSMNH
Trigger: ATGATTCATGGAATTGAGCCAATGTTGGAAACACCT...CCAGACAGGAAAAAGATTCCATGTCAGATAAGGCAACTGGGCTGGTCTTACTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360666.6
ENST00000369070.5
ENST00000646025.1
3UTR CAA 90 bp TTAGTTATCAATGTGTTCCATTTTCTGATGCCCTTGGCTGGGCTTTaGCAGTTGTGTTTACACCAACTCATAGACATTTATCTTCTTCGC +
Preference number: 2 (lower is better)
Translates to: LVINVFHFLMPLAGL*QLCLHQLIDIYLLR
Trigger: GCGAAGAAGATAAATGTCTATGAGTTGGTGTAAACACAACTGCAAAAGCCCAGCCAAGGGCATCAGAAAATGGAACACATTGATAACTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636335.1
3UTR-3UTR TCA 90 bp AAAAGGGTGACATGCTCTGATAAATCCCATTTAAGGATGATTCTGTTCAGGCAAATTGAAGCAAAAGGGTaGCATGCTCTGATAAATCCC +
Preference number: 2 (lower is better)
Translates to: KRVTCSDKSHLRMILFRQIEAKG*HALINP
Trigger: GGGATTTATCAGAGCATGTCACCCTTTTGCTTCAAT...TTGCCTGAACAGAATCATCCTTAAATGGGATTTATCAGAGCATGTCACCCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
3UTR-3UTR TCA 90 bp TGGGTCAACATTCAATATGGACAGCCAGCTAGCTCACAAGAAATGAAATGTAATATTGAAGCAAAAGGGTaGCATGCTCTGATAAATCCC +
Preference number: 2 (lower is better)
Translates to: WVNIQYGQPASSQEMKCNIEAKG*HALINP
Trigger: GGGATTTATCAGAGCATGTCACCCTTTTGCTTCAAT...ATTACATTTCATTTCTTGTGAGCTAGCTGGCTGTCCATATTGAATGTTGACCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
3UTR-3UTR TCA 90 bp ATGGGATCTAAAACCATGATCGTGTCTGATACTGTAAGCCTTTTAGCGTACTCAATGTTTCCACTTTCATaGGCTAAAGTTCAACCATGG +
Preference number: 2 (lower is better)
Translates to: MGSKTMIVSDTVSLLAYSMFPLS*AKVQPW
Trigger: CCATGGTTGAACTTTAGCTCATGAAAGTGGAAACAT...TGAGTACGCTAAAAGGCTTACAGTATCAGACACGATCATGGTTTTAGATCCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
3UTR-3UTR TCA 90 bp GATACTGTAAGCCTTTTAGCGTACTCAAATGGGTCAACATTCAATATGGACAGCCAGCAAGAAATTCTATaGCAGCTTCTGAGACAAGTA +
Preference number: 2 (lower is better)
Translates to: DTVSLLAYSNGSTFNMDSQQEIL*QLLRQV
Trigger: TACTTGTCTCAGAAGCTGTCATAGAATTTCTTGCTG...GCTGTCCATATTGAATGTTGACCCATTTGAGTACGCTAAAAGGCTTACAGTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
3UTR-3UTR TCA 90 bp AATACAAATCGAGTGGCACATACTTCCATTTTCTTCTTAGGCCAAAGGTTTCAGGAAACAGCTTCTGAATaGAAGGTCTTTCAGTCGTTG +
Preference number: 2 (lower is better)
Translates to: NTNRVAHTSIFFLGQRFQETASE*KVFQSL
Trigger: CAACGACTGAAAGACCTTTCATTCAGAAGCTGTTTC...CTGAAACCTTTGGCCTAAGAAGAAAATGGAAGTATGTGCCACTCGATTTGTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369070.5
ENST00000646025.1
3UTR-3UTR CCA 90 bp GATACTGTAAGCCTTTTAGCGTACTCAAATGGGTCAACATTCAATATGGACAGCTTGCCTTATCTGACATaGAATCTTTTTCCTGTCTGG +
Preference number: 2 (lower is better)
Translates to: DTVSLLAYSNGSTFNMDSLPYLT*NLFPVW
Trigger: CCAGACAGGAAAAAGATTCCATGTCAGATAAGGCAA...GCTGTCCATATTGAATGTTGACCCATTTGAGTACGCTAAAAGGCTTACAGTATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
3UTR-3UTR CCA 90 bp TTCAAATCTAGATCAGAAGTTCACTCAAGCCTACTGCAAAGGCCTGACACTGGTGAAATACAAATCGAGTaGCACATACTTCCATTTTCT +
Preference number: 2 (lower is better)
Translates to: FKSRSEVHSSLLQRPDTGEIQIE*HILPFS
Trigger: AGAAAATGGAAGTATGTGCCACTCGATTTGTATTTC...ACCAGTGTCAGGCCTTTGCAGTAGGCTTGAGTGAACTTCTGATCTAGATTTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
3UTR-3UTR CCA 90 bp TCAAATCTAGATCAGAAGTTCACTCAAGCCTACTGCAAAGGCCTGACACTGGTTTTTAGCGTACTCAAATaGGTCAACATTCAATATGGA +
Preference number: 2 (lower is better)
Translates to: SNLDQKFTQAYCKGLTLVFSVLK*VNIQYG
Trigger: TCCATATTGAATGTTGACCCATTTGAGTACGCTAAA...AACCAGTGTCAGGCCTTTGCAGTAGGCTTGAGTGAACTTCTGATCTAGATTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
3UTR-3UTR CCA 90 bp ATGAGTTTCCGATTGATGGCCCAAAACTGGTCAAATCTGTCATTTTGCAATCCCTCAATCTGTTGGCTGTaGGATGATACTAATATGAAG +
Preference number: 2 (lower is better)
Translates to: MSFRLMAQNWSNLSFCNPSICWL*DDTNMK
Trigger: CTTCATATTAGTATCATCCCACAGCCAACAGATTGA...GGGATTGCAAAATGACAGATTTGACCAGTTTTGGGCCATCAATCGGAAACTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369070.5
3UTR-3UTR CCA 90 bp GATACTGTAAGCCTTTTAGCGTACTCAAATGGGTCAACATTCAATATGGACAGCGATCCTTCAATCTGTTaGCTGTGGGATGATACTAAT +
Preference number: 2 (lower is better)
Translates to: DTVSLLAYSNGSTFNMDSDPSIC*LWDDTN
Trigger: ATTAGTATCATCCCACAGCCAACAGATTGAAGGATC...GCTGTCCATATTGAATGTTGACCCATTTGAGTACGCTAAAAGGCTTACAGTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360666.6
ENST00000369070.5
3UTR-3UTR TCA 90 bp TCTGATAAATCCCATTTAAGGATGATTCTGTTCAGGCAAATAGTTGATCCTTCAGGACGAAACAGCTTCTaGATGAAAGGTCTTTCAGTC +
Preference number: 2 (lower is better)
Translates to: SDKSHLRMILFRQIVDPSGRNSF*MKGLSV
Trigger: GACTGAAAGACCTTTCATTCAGAAGCTGTTTCGTCC...TGAAGGATCAACTATTTGCCTGAACAGAATCATCCTTAAATGGGATTTATCAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369070.5
ENST00000646025.1
3UTR-3UTR CCA 90 bp CAGAAATACAAATCGAGTGGCACATACTTCCATTTTCTTCTTAGGCCAAAGGTTTTGCCTTATCTGACATaGAATCTTTTTCCTGTCTGG +
Preference number: 2 (lower is better)
Translates to: QKYKSSGTYFHFLLRPKVLPYLT*NLFPVW
Trigger: CCAGACAGGAAAAAGATTCCATGTCAGATAAGGCAA...AACCTTTGGCCTAAGAAGAAAATGGAAGTATGTGCCACTCGATTTGTATTTCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
3UTR-3UTR CCA 90 bp ATCTCTCACTGTTCATTATCAAAGTTACAAGATTGCATACCAATAGACAGACTGACAGAAGACCTTCAGTaGTCCGGTAAGTCTTTCATG +
Preference number: 2 (lower is better)
Translates to: ISHCSLSKLQDCIPIDRLTEDLQ*SGKSFM
Trigger: CATGAAAGACTTACCGGACCACTGAAGGTCTTCTGT...CAGTCTGTCTATTGGTATGCAATCTTGTAACTTTGATAATGAACAGTGAGAGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
3UTR-3UTR CCA 90 bp ATGGGATCTAAAACCATGATCGTGTCTGATACTGTAAGCCTTTTAGCGTACTCAAGGTGTTTCCAACATTaGCTCAATTCCATGAATCAT +
Preference number: 2 (lower is better)
Translates to: MGSKTMIVSDTVSLLAYSRCFQH*LNSMNH
Trigger: ATGATTCATGGAATTGAGCCAATGTTGGAAACACCT...TGAGTACGCTAAAAGGCTTACAGTATCAGACACGATCATGGTTTTAGATCCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360666.6
ENST00000369070.5
3UTR-3UTR TCA 90 bp ACCCCTGTTTATTTGTTAATCAGAAATACAAATCGAGTGGCACATACTTCCATTATTGAAGCAAAAGGGTaGCATGCTCTGATAAATCCC +
Preference number: 2 (lower is better)
Translates to: TPVYLLIRNTNRVAHTSIIEAKG*HALINP
Trigger: GGGATTTATCAGAGCATGTCACCCTTTTGCTTCAAT...AATGGAAGTATGTGCCACTCGATTTGTATTTCTGATTAACAAATAAACAGGGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
3UTR-3UTR TCA 90 bp ATCTCTCACTGTTCATTATCAAAGTTACAAGATTGCATACCAATAGACAGACTGATTGAAGCAAAAGGGTaGCATGCTCTGATAAATCCC +
Preference number: 2 (lower is better)
Translates to: ISHCSLSKLQDCIPIDRLIEAKG*HALINP
Trigger: GGGATTTATCAGAGCATGTCACCCTTTTGCTTCAAT...CAGTCTGTCTATTGGTATGCAATCTTGTAACTTTGATAATGAACAGTGAGAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
3UTR-3UTR GCA 90 bp AAAAGGGTGACATGCTCTGATAAATCCCATTTAAGGATGATTCTGTTCAGGCAAAAAATGAGCTTCAATTaGATCCTTAGATGGACAGTG +
Preference number: 2 (lower is better)
Translates to: KRVTCSDKSHLRMILFRQKMSFN*ILRWTV
Trigger: CACTGTCCATCTAAGGATGCAATTGAAGCTCATTTT...TTGCCTGAACAGAATCATCCTTAAATGGGATTTATCAGAGCATGTCACCCTTTT
38% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369070.5
3UTR-3UTR CCA 90 bp TTTCATGAGCTAAAGTTCAACCATGGTCACCTTAGGAAATACCCCTGTTTATTTTTGCCTTATCTGACATaGAATCTTTTTCCTGTCTGG +
Preference number: 2 (lower is better)
Translates to: FHELKFNHGHLRKYPCLFLPYLT*NLFPVW
Trigger: CCAGACAGGAAAAAGATTCCATGTCAGATAAGGCAA...AAATAAACAGGGGTATTTCCTAAGGTGACCATGGTTGAACTTTAGCTCATGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
3UTR-3UTR CCA 90 bp ATGGGATCTAAAACCATGATCGTGTCTGATACTGTAAGCCTTTTAGCGTACTCATTTAGCGTACTCAAATaGGTCAACATTCAATATGGA +
Preference number: 2 (lower is better)
Translates to: MGSKTMIVSDTVSLLAYSFSVLK*VNIQYG
Trigger: TCCATATTGAATGTTGACCCATTTGAGTACGCTAAA...TGAGTACGCTAAAAGGCTTACAGTATCAGACACGATCATGGTTTTAGATCCCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
3UTR-3UTR GCA 90 bp TCTGATACTGTAAGCCTTTTAGCGTACTCAAATGGGTCAACATTCAATATGGACTTAAAGAAAAGGTACTaGAGTCAAGAGACAGGTAAT +
Preference number: 2 (lower is better)
Translates to: SDTVSLLAYSNGSTFNMDLKKRY*SQETGN
Trigger: ATTACCTGTCTCTTGACTGCAGTACCTTTTCTTTAA...GTCCATATTGAATGTTGACCCATTTGAGTACGCTAAAAGGCTTACAGTATCAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
3UTR-3UTR CCA 90 bp ATCTCTCACTGTTCATTATCAAAGTTACAAGATTGCATACCAATAGACAGACTGTTGCCTTATCTGACATaGAATCTTTTTCCTGTCTGG +
Preference number: 2 (lower is better)
Translates to: ISHCSLSKLQDCIPIDRLLPYLT*NLFPVW
Trigger: CCAGACAGGAAAAAGATTCCATGTCAGATAAGGCAA...CAGTCTGTCTATTGGTATGCAATCTTGTAACTTTGATAATGAACAGTGAGAGAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
3UTR-3UTR CCA 90 bp GTTTCAGCTTCATTATATTTTACAGAAGACCTTCAGTGGTCCGGTAAGTCTTTCGAAATACAAATCGAGTaGCACATACTTCCATTTTCT +
Preference number: 2 (lower is better)
Translates to: VSASLYFTEDLQWSGKSFEIQIE*HILPFS
Trigger: AGAAAATGGAAGTATGTGCCACTCGATTTGTATTTC...GAAAGACTTACCGGACCACTGAAGGTCTTCTGTAAAATATAATGAAGCTGAAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
3UTR-3UTR CCA 90 bp GCTTCATTATATTTTACAGAAGACCTTCAGTGGTCCGGTAAGTCTTTCATGTCAGAAATACAAATCGAGTaGCACATACTTCCATTTTCT +
Preference number: 2 (lower is better)
Translates to: ASLYFTEDLQWSGKSFMSEIQIE*HILPFS
Trigger: AGAAAATGGAAGTATGTGCCACTCGATTTGTATTTC...TGACATGAAAGACTTACCGGACCACTGAAGGTCTTCTGTAAAATATAATGAAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
3UTR-3UTR CCA 90 bp TGGGTCAACATTCAATATGGACAGCCAGCTAGCTCACAAGAAATGAAATGTAATGAAATACAAATCGAGTaGCACATACTTCCATTTTCT +
Preference number: 2 (lower is better)
Translates to: WVNIQYGQPASSQEMKCNEIQIE*HILPFS
Trigger: AGAAAATGGAAGTATGTGCCACTCGATTTGTATTTC...ATTACATTTCATTTCTTGTGAGCTAGCTGGCTGTCCATATTGAATGTTGACCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
3UTR-3UTR CCA 90 bp TCTGATAAATCCCATTTAAGGATGATTCTGTTCAGGCAAATAGTTGATCCTTCAGATCCTTCAATCTGTTaGCTGTGGGATGATACTAAT +
Preference number: 2 (lower is better)
Translates to: SDKSHLRMILFRQIVDPSDPSIC*LWDDTN
Trigger: ATTAGTATCATCCCACAGCCAACAGATTGAAGGATC...TGAAGGATCAACTATTTGCCTGAACAGAATCATCCTTAAATGGGATTTATCAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360666.6
ENST00000369070.5
ENST00000646025.1
3UTR-3UTR CCA 90 bp TACCCCTGTTTATTTGTTAATCAGAAATACAAATCGAGTGGCACATACTTCCATGATCCTTCAATCTGTTaGCTGTGGGATGATACTAAT +
Preference number: 2 (lower is better)
Translates to: YPCLFVNQKYKSSGTYFHDPSIC*LWDDTN
Trigger: ATTAGTATCATCCCACAGCCAACAGATTGAAGGATC...ATGGAAGTATGTGCCACTCGATTTGTATTTCTGATTAACAAATAAACAGGGGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360666.6
ENST00000369070.5
ENST00000646025.1
3UTR TCA 72 bp CCTCCCCTGGCAGTCCCCTGTTGCAGTCATTGGTCATaGCCACCGACACACCGGCAGGAAGGAGACAAAGGC +
Preference number: 3 (lower is better)
Translates to: PPLAVPCCSHWS*PPTHRQEGDKG
Trigger: GCCTTTGTCTCCTTCCTGCCGGTGTGTCGGTGGTCATGACCAATGACTGCAACAGGGGACTGCCAGGGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636437.1
3UTR-3UTR CAA 90 bp CTCAGGGGCAGCCCTTTCAGAGGTCCCGAGGAAGTTTCCAGGCGGCTTGAGTGGCCCTTGGCTGGGCTTTaGCAGTTGTGTTTACACCAA +
Preference number: 3 (lower is better)
Translates to: LRGSPFRGPEEVSRRLEWPLAGL*QLCLHQ
Trigger: TTGGTGTAAACACAACTGCAAAAGCCCAGCCAAGGG...CCACTCAAGCCGCCTGGAAACTTCCTCGGGACCTCTGAAAGGGCTGCCCCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636335.1
3UTR-3UTR CAA 90 bp AGAGTTCTGCTCAGGGGCAGCCCTTTCAGAGGTCCCGAGGAAGTTTCCAGGCGGTTCCTGATAGGGCTGTaGACACAGGCCTCTTGTGAA +
Preference number: 3 (lower is better)
Translates to: RVLLRGSPFRGPEEVSRRFLIGL*TQASCE
Trigger: TTCACAAGAGGCCTGTGTCAACAGCCCTATCAGGAA...CCGCCTGGAAACTTCCTCGGGACCTCTGAAAGGGCTGCCCCTGAGCAGAACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636335.1
ENST00000636437.1
3UTR-3UTR CAA 90 bp GCTGGAGACCTAGTTTCCTGTGTCTCTAGTTGTTCTCCCGCACCGAACCATTCATTCCTGATAGGGCTGTaGACACAGGCCTCTTGTGAA +
Preference number: 3 (lower is better)
Translates to: AGDLVSCVSSCSPAPNHSFLIGL*TQASCE
Trigger: TTCACAAGAGGCCTGTGTCAACAGCCCTATCAGGAA...TGAATGGTTCGGTGCGGGAGAACAACTAGAGACACAGGAAACTAGGTCTCCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636437.1
3UTR-3UTR CAA 90 bp GAGACAAAGGCTGTGTCATGTGATCTTCCTGATAGGGCTGTTGACACAGGCCTCCATTTTCTGATGCCCTaGGCTGGGCTTTTGCAGTTG +
Preference number: 3 (lower is better)
Translates to: ETKAVSCDLPDRAVDTGLHFLMP*AGLLQL
Trigger: CAACTGCAAAAGCCCAGCCAAGGGCATCAGAAAATG...GAGGCCTGTGTCAACAGCCCTATCAGGAAGATCACATGACACAGCCTTTGTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636335.1
3UTR CCA 72 bp TTCAGAGGTCCCGAGGAAGTTTCCAGGCGGCTTGAGTaGAAAAGTGAGTATTTCATCACCAGTGCGAGAGTC +
Preference number: 3 (lower is better)
Translates to: FRGPEEVSRRLE*KSEYFITSARV
Trigger: GACTCTCGCACTGGTGATGAAATACTCACTTTTCCACTCAAGCCGCCTGGAAACTTCCTCGGGACCTCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636335.1
ENST00000636437.1
3UTR-3UTR CAA 90 bp AGCGAAGTGTTTCTGGTCAGGTTGCCTCCACCAAACCTGATTGAAGCAAAAGGGGTGTTTCTGGTCAGGTaGCCTCCACCAAACCTGATT +
Preference number: 3 (lower is better)
Translates to: SEVFLVRLPPPNLIEAKGVFLVR*PPPNLI
Trigger: AATCAGGTTTGGTGGAGGCAACCTGACCAGAAACAC...CCCTTTTGCTTCAATCAGGTTTGGTGGAGGCAACCTGACCAGAAACACTTCGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
3UTR GCA 72 bp GAAGGACAAACTTCTTTGAGGAGATCTCCTAGTGTGTaGAACTGTCCATCTGCAGCCACAGGACGAAACAGC +
Preference number: 3 (lower is better)
Translates to: EGQTSLRRSPSV*NCPSAATGRNS
Trigger: GCTGTTTCGTCCTGTGGCTGCAGATGGACAGTTGCACACACTAGGAGATCTCCTCAAAGAAGTTTGTCCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369070.5
ENST00000613993.1
ENST00000646025.1
3UTR-3UTR CAA 90 bp AGCGAAGTGTTTCTGGTCAGGTTGCCTCCACCAAACCTGATTGAAGCAAAAGGGTTTTTCCTGTCTGGCTaGCAGCAGCGAAGTGTTTCT +
Preference number: 3 (lower is better)
Translates to: SEVFLVRLPPPNLIEAKGFFLSG*QQRSVS
Trigger: AGAAACACTTCGCTGCTGCAAGCCAGACAGGAAAAA...CCCTTTTGCTTCAATCAGGTTTGGTGGAGGCAACCTGACCAGAAACACTTCGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
3UTR-3UTR CAA 90 bp AGCGAAGTGTTTCTGGTCAGGTTGCCTCCACCAAACCTGATTGAAGCAAAAGGGGTAAGACCAGCCCAGTaGCCTTATCTGACATGGAAT +
Preference number: 3 (lower is better)
Translates to: SEVFLVRLPPPNLIEAKGVRPAQ*PYLTWN
Trigger: ATTCCATGTCAGATAAGGCAACTGGGCTGGTCTTAC...CCCTTTTGCTTCAATCAGGTTTGGTGGAGGCAACCTGACCAGAAACACTTCGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
3UTR CCA 72 bp TGCAAAGTAAGACCAGCCCAGTTGCCTTATCTGACATaGAATCTTTTTCCTGTCTGGCTTGCAGCAGCGAAG +
Preference number: 3 (lower is better)
Translates to: CKVRPAQLPYLT*NLFPVWLAAAK
Trigger: CTTCGCTGCTGCAAGCCAGACAGGAAAAAGATTCCATGTCAGATAAGGCAACTGGGCTGGTCTTACTTTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
3UTR CCA 72 bp GCTGCTAAGGTGGGGTTAGCTTTCAGAAGAAGGAGGTaGTTGGTCTCCAAGGTGATCAAAGCAACTTGTCTT +
Preference number: 3 (lower is better)
Translates to: AAKVGLAFRRRR*LVSKVIKATCL
Trigger: AAGACAAGTTGCTTTGATCACCTTGGAGACCAACCACCTCCTTCTTCTGAAAGCTAACCCCACCTTAGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636437.1
3UTR-3UTR CAA 90 bp TCAAATCTAGATCAGAAGTTCACTCAAGCCTACTGCAAAGGCCTGACACTGGTTGTGTTTCTGGTCAGGTaGCCTCCACCAAACCTGATT +
Preference number: 3 (lower is better)
Translates to: SNLDQKFTQAYCKGLTLVVFLVR*PPPNLI
Trigger: AATCAGGTTTGGTGGAGGCAACCTGACCAGAAACAC...AACCAGTGTCAGGCCTTTGCAGTAGGCTTGAGTGAACTTCTGATCTAGATTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
3UTR-3UTR CAA 90 bp AAAGTAAGACCAGCCCAGTTGCCTTATCTGACATGGAATCTTTTTCCTGTCTGGGTAAGACCAGCCCAGTaGCCTTATCTGACATGGAAT +
Preference number: 3 (lower is better)
Translates to: KVRPAQLPYLTWNLFPVWVRPAQ*PYLTWN
Trigger: ATTCCATGTCAGATAAGGCAACTGGGCTGGTCTTAC...CCAGACAGGAAAAAGATTCCATGTCAGATAAGGCAACTGGGCTGGTCTTACTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
3UTR-3UTR CAA 90 bp TCAAATCTAGATCAGAAGTTCACTCAAGCCTACTGCAAAGGCCTGACACTGGTTGTAAGACCAGCCCAGTaGCCTTATCTGACATGGAAT +
Preference number: 3 (lower is better)
Translates to: SNLDQKFTQAYCKGLTLVVRPAQ*PYLTWN
Trigger: ATTCCATGTCAGATAAGGCAACTGGGCTGGTCTTAC...AACCAGTGTCAGGCCTTTGCAGTAGGCTTGAGTGAACTTCTGATCTAGATTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
3UTR TCA 72 bp AGTGTTTCTGGTCAGGTTGCCTCCACCAAACCTGATTaGAGCAAAAGGGTGACATGCTCTGATAAATCCCAT +
Preference number: 3 (lower is better)
Translates to: SVSGQVASTKPD*SKRVTCSDKSH
Trigger: ATGGGATTTATCAGAGCATGTCACCCTTTTGCTTCAATCAGGTTTGGTGGAGGCAACCTGACCAGAAACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
3UTR-3UTR CAA 90 bp AAATCTAGATCAGAAGTTCACTCAAGCCTACTGCAAAGGCCTGACACTGGTTTTTTTTTCCTGTCTGGCTaGCAGCAGCGAAGTGTTTCT +
Preference number: 3 (lower is better)
Translates to: KSRSEVHSSLLQRPDTGFFFLSG*QQRSVS
Trigger: AGAAACACTTCGCTGCTGCAAGCCAGACAGGAAAAA...AAAACCAGTGTCAGGCCTTTGCAGTAGGCTTGAGTGAACTTCTGATCTAGATTT
44% GC, longest homopolymer 9 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
3UTR-3UTR CAA 90 bp AATACAAATCGAGTGGCACATACTTCCATTTTCTTCTTAGGCCAAAGGTTTCAGGTGTTTCTGGTCAGGTaGCCTCCACCAAACCTGATT +
Preference number: 3 (lower is better)
Translates to: NTNRVAHTSIFFLGQRFQVFLVR*PPPNLI
Trigger: AATCAGGTTTGGTGGAGGCAACCTGACCAGAAACAC...CTGAAACCTTTGGCCTAAGAAGAAAATGGAAGTATGTGCCACTCGATTTGTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
3UTR-3UTR CAA 90 bp TCTGATACTGTAAGCCTTTTAGCGTACTCAAATGGGTCAACATTCAATATGGACGTGTTTCTGGTCAGGTaGCCTCCACCAAACCTGATT +
Preference number: 3 (lower is better)
Translates to: SDTVSLLAYSNGSTFNMDVFLVR*PPPNLI
Trigger: AATCAGGTTTGGTGGAGGCAACCTGACCAGAAACAC...GTCCATATTGAATGTTGACCCATTTGAGTACGCTAAAAGGCTTACAGTATCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
3UTR-3UTR CAA 90 bp ATGACAGCTTCTGAGACAAGTAATCCTATGCCCTATATCCACCCCATGCCAATGATGAAAAACACTAGCTaGGAAGGAATGGGTTTTTCC +
Preference number: 3 (lower is better)
Translates to: MTASETSNPMPYIHPMPMMKNTS*EGMGFS
Trigger: GGAAAAACCCATTCCTTCCAAGCTAGTGTTTTTCAT...CATTGGCATGGGGTGGATATAGGGCATAGGATTACTTGTCTCAGAAGCTGTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
3UTR-3UTR CAA 90 bp TCAAATCTAGATCAGAAGTTCACTCAAGCCTACTGCAAAGGCCTGACACTGGTTTGCATTCTGATCCTTTaGCTCACTAAAGCTCACTTC +
Preference number: 3 (lower is better)
Translates to: SNLDQKFTQAYCKGLTLVCILIL*LTKAHF
Trigger: GAAGTGAGCTTTAGTGAGCAAAAGGATCAGAATGCA...AACCAGTGTCAGGCCTTTGCAGTAGGCTTGAGTGAACTTCTGATCTAGATTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
3UTR CCA 72 bp GGATATTCCATGAGTTTCCGATTGATGGCCCAAAACTaGTCAAATCTGTCATTTTGCAATCCCATCCAGAGT +
Preference number: 3 (lower is better)
Translates to: GYSMSFRLMAQN*SNLSFCNPIQS
Trigger: ACTCTGGATGGGATTGCAAAATGACAGATTTGACCAGTTTTGGGCCATCAATCGGAAACTCATGGAATATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369070.5
3UTR-3UTR CAA 90 bp GTGACATGCTCTGATAAATCCCATTTAAGGATGATTCTGTTCAGGCAAATAGTTGTGTTTCTGGTCAGGTaGCCTCCACCAAACCTGATT +
Preference number: 3 (lower is better)
Translates to: VTCSDKSHLRMILFRQIVVFLVR*PPPNLI
Trigger: AATCAGGTTTGGTGGAGGCAACCTGACCAGAAACAC...AACTATTTGCCTGAACAGAATCATCCTTAAATGGGATTTATCAGAGCATGTCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
3UTR-3UTR CAA 90 bp AGGGTGACATGCTCTGATAAATCCCATTTAAGGATGATTCTGTTCAGGCAAATATTTTTCCTGTCTGGCTaGCAGCAGCGAAGTGTTTCT +
Preference number: 3 (lower is better)
Translates to: RVTCSDKSHLRMILFRQIFFLSG*QQRSVS
Trigger: AGAAACACTTCGCTGCTGCAAGCCAGACAGGAAAAA...TATTTGCCTGAACAGAATCATCCTTAAATGGGATTTATCAGAGCATGTCACCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
3UTR-3UTR CAA 90 bp AAAAGGGTGACATGCTCTGATAAATCCCATTTAAGGATGATTCTGTTCAGGCAAGTAAGACCAGCCCAGTaGCCTTATCTGACATGGAAT +
Preference number: 3 (lower is better)
Translates to: KRVTCSDKSHLRMILFRQVRPAQ*PYLTWN
Trigger: ATTCCATGTCAGATAAGGCAACTGGGCTGGTCTTAC...TTGCCTGAACAGAATCATCCTTAAATGGGATTTATCAGAGCATGTCACCCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
3UTR-3UTR CAA 90 bp GCTTCATTATATTTTACAGAAGACCTTCAGTGGTCCGGTAAGTCTTTCATGTCAGTAAGACCAGCCCAGTaGCCTTATCTGACATGGAAT +
Preference number: 3 (lower is better)
Translates to: ASLYFTEDLQWSGKSFMSVRPAQ*PYLTWN
Trigger: ATTCCATGTCAGATAAGGCAACTGGGCTGGTCTTAC...TGACATGAAAGACTTACCGGACCACTGAAGGTCTTCTGTAAAATATAATGAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
3UTR GCA 72 bp TTTACCACACTTTCTTCATCACAGCTTAGTGTTCCCTaGATTCTGATCCTTTTGCTCACTAAAGCTCACTTC +
Preference number: 3 (lower is better)
Translates to: FTTLSSSQLSVP*ILILLLTKAHF
Trigger: GAAGTGAGCTTTAGTGAGCAAAAGGATCAGAATGCAGGGAACACTAAGCTGTGATGAAGAAAGTGTGGTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
3UTR-3UTR CAA 90 bp GTGACATGCTCTGATAAATCCCATTTAAGGATGATTCTGTTCAGGCAAATAGTTTTTTTCCTGTCTGGCTaGCAGCAGCGAAGTGTTTCT +
Preference number: 3 (lower is better)
Translates to: VTCSDKSHLRMILFRQIVFFLSG*QQRSVS
Trigger: AGAAACACTTCGCTGCTGCAAGCCAGACAGGAAAAA...AACTATTTGCCTGAACAGAATCATCCTTAAATGGGATTTATCAGAGCATGTCAC
41% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
3UTR-3UTR CAA 90 bp TTCAAATCTAGATCAGAAGTTCACTCAAGCCTACTGCAAAGGCCTGACACTGGTAATGCACAAATATGTTaGACTGGTAAAATCCCAGAG +
Preference number: 3 (lower is better)
Translates to: FKSRSEVHSSLLQRPDTGNAQIC*TGKIPE
Trigger: CTCTGGGATTTTACCAGTCAAACATATTTGTGCATT...ACCAGTGTCAGGCCTTTGCAGTAGGCTTGAGTGAACTTCTGATCTAGATTTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
3UTR-3UTR CAA 90 bp GATACTGTAAGCCTTTTAGCGTACTCAAATGGGTCAACATTCAATATGGACAGCGTCAAATCTGTCATTTaGCAATCCCATCCAGAGTTG +
Preference number: 3 (lower is better)
Translates to: DTVSLLAYSNGSTFNMDSVKSVI*QSHPEL
Trigger: CAACTCTGGATGGGATTGCAAAATGACAGATTTGAC...GCTGTCCATATTGAATGTTGACCCATTTGAGTACGCTAAAAGGCTTACAGTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369070.5
3UTR-3UTR CAA 90 bp GATACTGTAAGCCTTTTAGCGTACTCAAATGGGTCAACATTCAATATGGACAGCATGAAAAACACTAGCTaGGAAGGAATGGGTTTTTCC +
Preference number: 3 (lower is better)
Translates to: DTVSLLAYSNGSTFNMDSMKNTS*EGMGFS
Trigger: GGAAAAACCCATTCCTTCCAAGCTAGTGTTTTTCAT...GCTGTCCATATTGAATGTTGACCCATTTGAGTACGCTAAAAGGCTTACAGTATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
3UTR-3UTR CAA 90 bp AAATCTAGATCAGAAGTTCACTCAAGCCTACTGCAAAGGCCTGACACTGGTTTTAATGCACAAATATGTTaGACTGGTAAAATCCCAGAG +
Preference number: 3 (lower is better)
Translates to: KSRSEVHSSLLQRPDTGFNAQIC*TGKIPE
Trigger: CTCTGGGATTTTACCAGTCAAACATATTTGTGCATT...AAAACCAGTGTCAGGCCTTTGCAGTAGGCTTGAGTGAACTTCTGATCTAGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
3UTR TCA 72 bp CACACTTGGCGCCTCCAAATATCTGATTATTTACCTTaGGCAAGACAAAAATGTCACCATTGTTTGAAGAAA +
Preference number: 3 (lower is better)
Translates to: HTWRLQISDYLP*ARQKCHHCLKK
Trigger: TTTCTTCAAACAATGGTGACATTTTTGTCTTGCTCAAGGTAAATAATCAGATATTTGGAGGCGCCAAGTGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636437.1
3UTR TCA 72 bp TTTAAAGCATCAGCTTCTTTCATACATGACATAAAATaGGCTTCAATTGCATCCTTAGATGGACAGTGCAGA +
Preference number: 3 (lower is better)
Translates to: FKASASFIHDIK*ASIASLDGQCR
Trigger: TCTGCACTGTCCATCTAAGGATGCAATTGAAGCTCATTTTATGTCATGTATGAAAGAAGCTGATGCTTTAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369070.5
CDS-3UTR GCA 90 bp CTCAGGGGCAGCCCTTTCAGAGGTCCCGAGGAAGTTTCCAGGCGGCTTGAGTGGGCAGCCAGTGGCCTCTaGCCGGCAGGGCTCTGCGCT +
Preference number: 4 (lower is better)
Translates to: LRGSPFRGPEEVSRRLEWAASGL*PAGLCA
Trigger: AGCGCAGAGCCCTGCCGGGCAGAGGCCACTGGCTGC...CCACTCAAGCCGCCTGGAAACTTCCTCGGGACCTCTGAAAGGGCTGCCCCTGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636335.1
ENST00000636437.1
CDS-3UTR CCA 90 bp GGAGAGTTCTGCTCAGGGGCAGCCCTTTCAGAGGTCCCGAGGAAGTTTCCAGGCGATTCCGCGCTCCGGTaGGGCGGCGGGGCAAGCTGC +
Preference number: 4 (lower is better)
Translates to: GEFCSGAALSEVPRKFPGDSALR*GGGASC
Trigger: GCAGCTTGCCCCGCCGCCCCACCGGAGCGCGGAATC...GCCTGGAAACTTCCTCGGGACCTCTGAAAGGGCTGCCCCTGAGCAGAACTCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636335.1
ENST00000636437.1
CDS-3UTR CCA 90 bp GGGAGAGTTCTGCTCAGGGGCAGCCCTTTCAGAGGTCCCGAGGAAGTTTCCAGGGGCTCCCCGCACTGGTaGGGACGCCCAGATTCCGCG +
Preference number: 4 (lower is better)
Translates to: GRVLLRGSPFRGPEEVSRGSPHW*GRPDSA
Trigger: CGCGGAATCTGGGCGTCCCCACCAGTGCGGGGAGCC...CCTGGAAACTTCCTCGGGACCTCTGAAAGGGCTGCCCCTGAGCAGAACTCTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000636335.1
ENST00000636437.1
CDS-3UTR CCA 90 bp GTAGGAGAAGCAGGGCCTTTCTGGGCTGTGGTGGAAGGCAGCTGGGGAGGTGTCTCCGGCTCCCCGCACTaGTGGGGACGCCCAGATTCC +
Preference number: 4 (lower is better)
Translates to: VGEAGPFWAVVEGSWGGVSGSPH*WGRPDS
Trigger: GGAATCTGGGCGTCCCCACCAGTGCGGGGAGCCGGA...GACACCTCCCCAGCTGCCTTCCACCACAGCCCAGAAAGGCCCTGCTTCTCCTAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000636437.1
CDS-3UTR GCA 90 bp GGGGCAGCCCTTTCAGAGGTCCCGAGGAAGTTTCCAGGCGGCTTGAGTGGAAAAGGCGGCGGGGCAAGCTaGCCGCCTGACACACTGTCC +
Preference number: 4 (lower is better)
Translates to: GAALSEVPRKFPGGLSGKGGGAS*PPDTLS
Trigger: GGACAGTGTGTCAGGCGGGCAGCTTGCCCCGCCGCC...TTTTCCACTCAAGCCGCCTGGAAACTTCCTCGGGACCTCTGAAAGGGCTGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000636335.1
ENST00000636437.1
CDS-3UTR CCA 90 bp AGTTCTGCTCAGGGGCAGCCCTTTCAGAGGTCCCGAGGAAGTTTCCAGGCGGCTTCCGGCTCCCCGCACTaGTGGGGACGCCCAGATTCC +
Preference number: 4 (lower is better)
Translates to: SSAQGQPFQRSRGSFQAASGSPH*WGRPDS
Trigger: GGAATCTGGGCGTCCCCACCAGTGCGGGGAGCCGGA...AGCCGCCTGGAAACTTCCTCGGGACCTCTGAAAGGGCTGCCCCTGAGCAGAACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000636335.1
ENST00000636437.1
CDS-3UTR GCA 90 bp GGGAGAGTTCTGCTCAGGGGCAGCCCTTTCAGAGGTCCCGAGGAAGTTTCCAGGGTCGGAGCTGAACCCTaGTGCACTTCCGCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: GRVLLRGSPFRGPEEVSRVGAEP*CTSALW
Trigger: CCAGAGGGCGGAAGTGCAGCAGGGTTCAGCTCCGAC...CCTGGAAACTTCCTCGGGACCTCTGAAAGGGCTGCCCCTGAGCAGAACTCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636437.1
CDS-3UTR CCA 90 bp TGCTCAGGGGCAGCCCTTTCAGAGGTCCCGAGGAAGTTTCCAGGCGGCTTGAGTCTTTCTGGGCTGTGGTaGAAGGCAGCTGGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: CSGAALSEVPRKFPGGLSLSGLW*KAAGEV
Trigger: CACCTCCCCAGCTGCCTTCCACCACAGCCCAGAAAG...ACTCAAGCCGCCTGGAAACTTCCTCGGGACCTCTGAAAGGGCTGCCCCTGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636437.1
CDS-3UTR TCA 90 bp AGAGTTCTGCTCAGGGGCAGCCCTTTCAGAGGTCCCGAGGAAGTTTCCAGGCGGTGCAGTCATTGGTCATaGCCACCGACACACCGGCAG +
Preference number: 4 (lower is better)
Translates to: RVLLRGSPFRGPEEVSRRCSHWS*PPTHRQ
Trigger: CTGCCGGTGTGTCGGTGGTCATGACCAATGACTGCA...CCGCCTGGAAACTTCCTCGGGACCTCTGAAAGGGCTGCCCCTGAGCAGAACTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636437.1
CDS-3UTR GCA 90 bp AGAGTTCTGCTCAGGGGCAGCCCTTTCAGAGGTCCCGAGGAAGTTTCCAGGCGGGGAGCTGAACCCTGCTaGACTTCCGCCCTCTGGTAT +
Preference number: 4 (lower is better)
Translates to: RVLLRGSPFRGPEEVSRRGAEPC*TSALWY
Trigger: ATACCAGAGGGCGGAAGTGCAGCAGGGTTCAGCTCC...CCGCCTGGAAACTTCCTCGGGACCTCTGAAAGGGCTGCCCCTGAGCAGAACTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636437.1
CDS-3UTR GCA 90 bp CCTTTCAGAGGTCCCGAGGAAGTTTCCAGGCGGCTTGAGTGGAAAAGTGAGTATGCAGCCAGTGGCCTCTaGCCGGCAGGGCTCTGCGCT +
Preference number: 4 (lower is better)
Translates to: PFRGPEEVSRRLEWKSEYAASGL*PAGLCA
Trigger: AGCGCAGAGCCCTGCCGGGCAGAGGCCACTGGCTGC...ATACTCACTTTTCCACTCAAGCCGCCTGGAAACTTCCTCGGGACCTCTGAAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636335.1
ENST00000636437.1
CDS-3UTR CCA 90 bp AGAGGTCCCGAGGAAGTTTCCAGGCGGCTTGAGTGGAAAAGTGAGTATTTCATCGATTCCGCGCTCCGGTaGGGCGGCGGGGCAAGCTGC +
Preference number: 4 (lower is better)
Translates to: RGPEEVSRRLEWKSEYFIDSALR*GGGASC
Trigger: GCAGCTTGCCCCGCCGCCCCACCGGAGCGCGGAATC...GATGAAATACTCACTTTTCCACTCAAGCCGCCTGGAAACTTCCTCGGGACCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636335.1
ENST00000636437.1
CDS-3UTR CCA 90 bp AGCGAAGTGTTTCTGGTCAGGTTGCCTCCACCAAACCTGATTGAAGCAAAAGGGGATTCCGCGCTCCGGTaGGGCGGCGGGGCAAGCTGC +
Preference number: 4 (lower is better)
Translates to: SEVFLVRLPPPNLIEAKGDSALR*GGGASC
Trigger: GCAGCTTGCCCCGCCGCCCCACCGGAGCGCGGAATC...CCCTTTTGCTTCAATCAGGTTTGGTGGAGGCAACCTGACCAGAAACACTTCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR CCA 90 bp TGGCAGTGGAGGAAAGCAGAGGTGATGCAAAGTAAGACCAGCCCAGTTGCCTTAGGCTCCCCGCACTGGTaGGGACGCCCAGATTCCGCG +
Preference number: 4 (lower is better)
Translates to: WQWRKAEVMQSKTSPVALGSPHW*GRPDSA
Trigger: CGCGGAATCTGGGCGTCCCCACCAGTGCGGGGAGCC...TAAGGCAACTGGGCTGGTCTTACTTTGCATCACCTCTGCTTTCCTCCACTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR CCA 90 bp CTGTTGCAGTCATTGGTCATGACCACCGACACACCGGCAGGAAGGAGACAAAGGGGCCTTTCTGGGCTGTaGTGGAAGGCAGCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: LLQSLVMTTDTPAGRRQRGLSGL*WKAAGE
Trigger: CTCCCCAGCTGCCTTCCACCACAGCCCAGAAAGGCC...CCTTTGTCTCCTTCCTGCCGGTGTGTCGGTGGTCATGACCAATGACTGCAACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636437.1
CDS-3UTR TCA 90 bp TCAGAGGTCCCGAGGAAGTTTCCAGGCGGCTTGAGTGGAAAAGTGAGTATTTCACGCGGAGGTCGGAGCTaGACCCTGCTGCACTTCCGC +
Preference number: 4 (lower is better)
Translates to: SEVPRKFPGGLSGKVSISRGGRS*TLLHFR
Trigger: GCGGAAGTGCAGCAGGGTTCAGCTCCGACCTCCGCG...TGAAATACTCACTTTTCCACTCAAGCCGCCTGGAAACTTCCTCGGGACCTCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636437.1
CDS-3UTR TCA 90 bp GGGAGAGTTCTGCTCAGGGGCAGCCCTTTCAGAGGTCCCGAGGAAGTTTCCAGGCCCCACCAAGGTTCATaGGATAGATGCAGAGCCTAC +
Preference number: 4 (lower is better)
Translates to: GRVLLRGSPFRGPEEVSRPHQGS*DRCRAY
Trigger: GTAGGCTCTGCATCTATCTCATGAACCTTGGTGGGG...CCTGGAAACTTCCTCGGGACCTCTGAAAGGGCTGCCCCTGAGCAGAACTCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636437.1
CDS-3UTR GCA 90 bp CATGTGATCTTCCTGATAGGGCTGTTGACACAGGCCTCTTGTGAAGATCCACATGGCGGCGGGGCAAGCTaGCCGCCTGACACACTGTCC +
Preference number: 4 (lower is better)
Translates to: HVIFLIGLLTQASCEDPHGGGAS*PPDTLS
Trigger: GGACAGTGTGTCAGGCGGGCAGCTTGCCCCGCCGCC...ATGTGGATCTTCACAAGAGGCCTGTGTCAACAGCCCTATCAGGAAGATCACATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636335.1
ENST00000636437.1
CDS-3UTR CCA 90 bp CATGTGATCTTCCTGATAGGGCTGTTGACACAGGCCTCTTGTGAAGATCCACATGGCTCCCCGCACTGGTaGGGACGCCCAGATTCCGCG +
Preference number: 4 (lower is better)
Translates to: HVIFLIGLLTQASCEDPHGSPHW*GRPDSA
Trigger: CGCGGAATCTGGGCGTCCCCACCAGTGCGGGGAGCC...ATGTGGATCTTCACAAGAGGCCTGTGTCAACAGCCCTATCAGGAAGATCACATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636335.1
ENST00000636437.1
CDS-3UTR CCA 90 bp TGCTCAGGGGCAGCCCTTTCAGAGGTCCCGAGGAAGTTTCCAGGCGGCTTGAGTTGCACTTCCGCCCTCTaGTATCCAGCGAATACAACC +
Preference number: 4 (lower is better)
Translates to: CSGAALSEVPRKFPGGLSCTSAL*YPANTT
Trigger: GGTTGTATTCGCTGGATACCAGAGGGCGGAAGTGCA...ACTCAAGCCGCCTGGAAACTTCCTCGGGACCTCTGAAAGGGCTGCCCCTGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636437.1
CDS-3UTR GCA 90 bp TTGAGGAGATCTCCTAGTGTGTGCAACTGTCCATCTGCAGCCACAGGACGAAACCCTGACACACTGTCCTaGGGGGACGCGGTAGCAGGA +
Preference number: 4 (lower is better)
Translates to: LRRSPSVCNCPSAATGRNPDTLS*GDAVAG
Trigger: TCCTGCTACCGCGTCCCCGCAGGACAGTGTGTCAGG...GTTTCGTCCTGTGGCTGCAGATGGACAGTTGCACACACTAGGAGATCTCCTCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369070.5
ENST00000646025.1
CDS-3UTR CCA 90 bp TCAAATCTAGATCAGAAGTTCACTCAAGCCTACTGCAAAGGCCTGACACTGGTTGATTCCGCGCTCCGGTaGGGCGGCGGGGCAAGCTGC +
Preference number: 4 (lower is better)
Translates to: SNLDQKFTQAYCKGLTLVDSALR*GGGASC
Trigger: GCAGCTTGCCCCGCCGCCCCACCGGAGCGCGGAATC...AACCAGTGTCAGGCCTTTGCAGTAGGCTTGAGTGAACTTCTGATCTAGATTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR CCA 90 bp AAAGCAGAGGTGATGCAAAGTAAGACCAGCCCAGTTGCCTTATCTGACATGGAAGGCTCCCCGCACTGGTaGGGACGCCCAGATTCCGCG +
Preference number: 4 (lower is better)
Translates to: KAEVMQSKTSPVALSDMEGSPHW*GRPDSA
Trigger: CGCGGAATCTGGGCGTCCCCACCAGTGCGGGGAGCC...TTCCATGTCAGATAAGGCAACTGGGCTGGTCTTACTTTGCATCACCTCTGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR CCA 90 bp TTCAGAGGTCCCGAGGAAGTTTCCAGGCGGCTTGAGTGGAAAAGTGAGTATTTCGGCAGGGCTCTGCGCTaGGGAGAGGGAGAGTTCTGC +
Preference number: 4 (lower is better)
Translates to: FRGPEEVSRRLEWKSEYFGRALR*GEGEFC
Trigger: GCAGAACTCTCCCTCTCCCCAGCGCAGAGCCCTGCC...GAAATACTCACTTTTCCACTCAAGCCGCCTGGAAACTTCCTCGGGACCTCTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636335.1
ENST00000636437.1
CDS-3UTR CCA 90 bp GAGGTCCCGAGGAAGTTTCCAGGCGGCTTGAGTGGAAAAGTGAGTATTTCATCAGGCAGGGCTCTGCGCTaGGGAGAGGGAGAGTTCTGC +
Preference number: 4 (lower is better)
Translates to: EVPRKFPGGLSGKVSISSGRALR*GEGEFC
Trigger: GCAGAACTCTCCCTCTCCCCAGCGCAGAGCCCTGCC...TGATGAAATACTCACTTTTCCACTCAAGCCGCCTGGAAACTTCCTCGGGACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636335.1
ENST00000636437.1
CDS-3UTR TCA 90 bp AAAGCAGAGGTGATGCAAAGTAAGACCAGCCCAGTTGCCTTATCTGACATGGAACGCGGAGGTCGGAGCTaGACCCTGCTGCACTTCCGC +
Preference number: 4 (lower is better)
Translates to: KAEVMQSKTSPVALSDMERGGRS*TLLHFR
Trigger: GCGGAAGTGCAGCAGGGTTCAGCTCCGACCTCCGCG...TTCCATGTCAGATAAGGCAACTGGGCTGGTCTTACTTTGCATCACCTCTGCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR TCA 90 bp GTAGGAGAAGCAGGGCCTTTCTGGGCTGTGGTGGAAGGCAGCTGGGGAGGTGTCGGTTGGTCTCCAAGGTaGTCAAAGCAACTTGTCTTT +
Preference number: 4 (lower is better)
Translates to: VGEAGPFWAVVEGSWGGVGWSPR*SKQLVF
Trigger: AAAGACAAGTTGCTTTGATCACCTTGGAGACCAACC...GACACCTCCCCAGCTGCCTTCCACCACAGCCCAGAAAGGCCCTGCTTCTCCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636437.1
CDS-3UTR GCA 90 bp TTCAGAGGTCCCGAGGAAGTTTCCAGGCGGCTTGAGTGGAAAAGTGAGTATTTCCCTGACACACTGTCCTaGGGGGACGCGGTAGCAGGA +
Preference number: 4 (lower is better)
Translates to: FRGPEEVSRRLEWKSEYFPDTLS*GDAVAG
Trigger: TCCTGCTACCGCGTCCCCGCAGGACAGTGTGTCAGG...GAAATACTCACTTTTCCACTCAAGCCGCCTGGAAACTTCCTCGGGACCTCTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000636335.1
ENST00000636437.1
CDS-3UTR GCA 90 bp TTCAAATCTAGATCAGAAGTTCACTCAAGCCTACTGCAAAGGCCTGACACTGGTGGCGGCGGGGCAAGCTaGCCGCCTGACACACTGTCC +
Preference number: 4 (lower is better)
Translates to: FKSRSEVHSSLLQRPDTGGGGAS*PPDTLS
Trigger: GGACAGTGTGTCAGGCGGGCAGCTTGCCCCGCCGCC...ACCAGTGTCAGGCCTTTGCAGTAGGCTTGAGTGAACTTCTGATCTAGATTTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR GCA 90 bp CTGGCTGCCAGGGACCACAGTGAAAAATTAGACCTGGAGCCAATGAAAAACACTTACAACCGGCAACGCTaGGGAGCCCTGGCAGCGCAC +
Preference number: 4 (lower is better)
Translates to: LAARDHSEKLDLEPMKNTYNRQR*GALAAH
Trigger: GTGCGCTGCCAGGGCTCCGCAGCGTTGCCGGTTGTA...AGTGTTTTTCATTGGCTCCAGGTCTAATTTTTCACTGTGGTCCCTGGCAGCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369070.5
CDS-3UTR CCA 90 bp TATTTTACAGAAGACCTTCAGTGGTCCGGTAAGTCTTTCATGTCACAGCTGAGGGGCTCCCCGCACTGGTaGGGACGCCCAGATTCCGCG +
Preference number: 4 (lower is better)
Translates to: YFTEDLQWSGKSFMSQLRGSPHW*GRPDSA
Trigger: CGCGGAATCTGGGCGTCCCCACCAGTGCGGGGAGCC...CCTCAGCTGTGACATGAAAGACTTACCGGACCACTGAAGGTCTTCTGTAAAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR CCA 90 bp CTTCAGTGGTCCGGTAAGTCTTTCATGTCACAGCTGAGGTTTAATGATGGCAGTTCCGGCTCCCCGCACTaGTGGGGACGCCCAGATTCC +
Preference number: 4 (lower is better)
Translates to: LQWSGKSFMSQLRFNDGSSGSPH*WGRPDS
Trigger: GGAATCTGGGCGTCCCCACCAGTGCGGGGAGCCGGA...ACTGCCATCATTAAACCTCAGCTGTGACATGAAAGACTTACCGGACCACTGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR CCA 90 bp AAAGCAGAGGTGATGCAAAGTAAGACCAGCCCAGTTGCCTTATCTGACATGGAATCCGGCTCCCCGCACTaGTGGGGACGCCCAGATTCC +
Preference number: 4 (lower is better)
Translates to: KAEVMQSKTSPVALSDMESGSPH*WGRPDS
Trigger: GGAATCTGGGCGTCCCCACCAGTGCGGGGAGCCGGA...TTCCATGTCAGATAAGGCAACTGGGCTGGTCTTACTTTGCATCACCTCTGCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR TCA 90 bp GTAGGAGAAGCAGGGCCTTTCTGGGCTGTGGTGGAAGGCAGCTGGGGAGGTGTCAAGGACAAACTTCTTTaGGGAGATCTCCTAGTGTGT +
Preference number: 4 (lower is better)
Translates to: VGEAGPFWAVVEGSWGGVKDKLL*GDLLVC
Trigger: ACACACTAGGAGATCTCCTCAAAGAAGTTTGTCCTT...GACACCTCCCCAGCTGCCTTCCACCACAGCCCAGAAAGGCCCTGCTTCTCCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636437.1
CDS-3UTR TCA 90 bp AAAGTAAGACCAGCCCAGTTGCCTTATCTGACATGGAATCTTTTTCCTGTCTGGCGCGGAGGTCGGAGCTaGACCCTGCTGCACTTCCGC +
Preference number: 4 (lower is better)
Translates to: KVRPAQLPYLTWNLFPVWRGGRS*TLLHFR
Trigger: GCGGAAGTGCAGCAGGGTTCAGCTCCGACCTCCGCG...CCAGACAGGAAAAAGATTCCATGTCAGATAAGGCAACTGGGCTGGTCTTACTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR TCA 90 bp GACCTAGTTTCCTGTGTCTCTAGTTGTTCTCCCGCACCGAACCATTCAGGTAGGCTTTGTGCTTCAGTCTaGTTGGGGGTGCGGGGGAAG +
Preference number: 4 (lower is better)
Translates to: DLVSCVSSCSPAPNHSGRLCASV*LGVRGK
Trigger: CTTCCCCCGCACCCCCAATCAGACTGAAGCACAAAG...CCTACCTGAATGGTTCGGTGCGGGAGAACAACTAGAGACACAGGAAACTAGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000636437.1
CDS-3UTR GCA 90 bp CATGTGATCTTCCTGATAGGGCTGTTGACACAGGCCTCTTGTGAAGATCCACATCCTGACACACTGTCCTaGGGGGACGCGGTAGCAGGA +
Preference number: 4 (lower is better)
Translates to: HVIFLIGLLTQASCEDPHPDTLS*GDAVAG
Trigger: TCCTGCTACCGCGTCCCCGCAGGACAGTGTGTCAGG...ATGTGGATCTTCACAAGAGGCCTGTGTCAACAGCCCTATCAGGAAGATCACATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000636335.1
ENST00000636437.1
CDS-3UTR GCA 90 bp AAATCTAGATCAGAAGTTCACTCAAGCCTACTGCAAAGGCCTGACACTGGTTTTGGCGGCGGGGCAAGCTaGCCGCCTGACACACTGTCC +
Preference number: 4 (lower is better)
Translates to: KSRSEVHSSLLQRPDTGFGGGAS*PPDTLS
Trigger: GGACAGTGTGTCAGGCGGGCAGCTTGCCCCGCCGCC...AAAACCAGTGTCAGGCCTTTGCAGTAGGCTTGAGTGAACTTCTGATCTAGATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR GCA 90 bp CCATCTTCAGGATCAATAGCAGAAGGACAAACTTCTTTGAGGAGATCTCCTAGTGGCGGCGGGGCAAGCTaGCCGCCTGACACACTGTCC +
Preference number: 4 (lower is better)
Translates to: PSSGSIAEGQTSLRRSPSGGGAS*PPDTLS
Trigger: GGACAGTGTGTCAGGCGGGCAGCTTGCCCCGCCGCC...ACTAGGAGATCTCCTCAAAGAAGTTTGTCCTTCTGCTATTGATCCTGAAGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369070.5
ENST00000646025.1
CDS-3UTR CCA 90 bp CTGTCTGGCTTGCAGCAGCGAAGTGTTTCTGGTCAGGTTGCCTCCACCAAACCTGCAGCGAAGTGTTTCTaGTCAGGTTGCCTCCACCAA +
Preference number: 4 (lower is better)
Translates to: LSGLQQRSVSGQVASTKPAAKCF*SGCLHQ
Trigger: TTGGTGGAGGCAACCTGACCAGAAACACTTCGCTGC...AGGTTTGGTGGAGGCAACCTGACCAGAAACACTTCGCTGCTGCAAGCCAGACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR CCA 90 bp ATGCAAAGTAAGACCAGCCCAGTTGCCTTATCTGACATGGAATCTTTTTCCTGTGGCTCCCCGCACTGGTaGGGACGCCCAGATTCCGCG +
Preference number: 4 (lower is better)
Translates to: MQSKTSPVALSDMESFSCGSPHW*GRPDSA
Trigger: CGCGGAATCTGGGCGTCCCCACCAGTGCGGGGAGCC...ACAGGAAAAAGATTCCATGTCAGATAAGGCAACTGGGCTGGTCTTACTTTGCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR CCA 90 bp GGATCAATAGCAGAAGGACAAACTTCTTTGAGGAGATCTCCTAGTGTGTGCAACTCCGGCTCCCCGCACTaGTGGGGACGCCCAGATTCC +
Preference number: 4 (lower is better)
Translates to: GSIAEGQTSLRRSPSVCNSGSPH*WGRPDS
Trigger: GGAATCTGGGCGTCCCCACCAGTGCGGGGAGCCGGA...GTTGCACACACTAGGAGATCTCCTCAAAGAAGTTTGTCCTTCTGCTATTGATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369070.5
ENST00000646025.1
CDS-3UTR CCA 90 bp AGAGGTCCCGAGGAAGTTTCCAGGCGGCTTGAGTGGAAAAGTGAGTATTTCATCGATACTCAAGCCGAGTaGAGGGAGTGGGGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: RGPEEVSRRLEWKSEYFIDTQAE*REWGSW
Trigger: CCAGGAGCCCCACTCCCTCCACTCGGCTTGAGTATC...GATGAAATACTCACTTTTCCACTCAAGCCGCCTGGAAACTTCCTCGGGACCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636437.1
CDS-3UTR TCA 90 bp AGTTCTGCTCAGGGGCAGCCCTTTCAGAGGTCCCGAGGAAGTTTCCAGGCGGCTCAGCTAGAATATAGATaGAGCATTTTTCCTCCCCTG +
Preference number: 4 (lower is better)
Translates to: SSAQGQPFQRSRGSFQAAQLEYR*SIFPPL
Trigger: CAGGGGAGGAAAAATGCTTCATCTATATTCTAGCTG...AGCCGCCTGGAAACTTCCTCGGGACCTCTGAAAGGGCTGCCCCTGAGCAGAACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000636437.1
CDS-3UTR TCA 90 bp AGAGTTCTGCTCAGGGGCAGCCCTTTCAGAGGTCCCGAGGAAGTTTCCAGGCGGTTCTGTGACTATCACTaGTTCTCTCTAAAACGGGGT +
Preference number: 4 (lower is better)
Translates to: RVLLRGSPFRGPEEVSRRFCDYH*FSLKRG
Trigger: ACCCCGTTTTAGAGAGAATCAGTGATAGTCACAGAA...CCGCCTGGAAACTTCCTCGGGACCTCTGAAAGGGCTGCCCCTGAGCAGAACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000636437.1
CDS-3UTR GCA 90 bp CTGTCTGGCTTGCAGCAGCGAAGTGTTTCTGGTCAGGTTGCCTCCACCAAACCTAGATCTCCTAGTGTGTaGAACTGTCCATCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: LSGLQQRSVSGQVASTKPRSPSV*NCPSAA
Trigger: GGCTGCAGATGGACAGTTGCACACACTAGGAGATCT...AGGTTTGGTGGAGGCAACCTGACCAGAAACACTTCGCTGCTGCAAGCCAGACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR GCA 90 bp TCAGGATCAATAGCAGAAGGACAAACTTCTTTGAGGAGATCTCCTAGTGTGTGCTACAACCGGCAACGCTaGGGAGCCCTGGCAGCGCAC +
Preference number: 4 (lower is better)
Translates to: SGSIAEGQTSLRRSPSVCYNRQR*GALAAH
Trigger: GTGCGCTGCCAGGGCTCCGCAGCGTTGCCGGTTGTA...GCACACACTAGGAGATCTCCTCAAAGAAGTTTGTCCTTCTGCTATTGATCCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369070.5
ENST00000646025.1
CDS-3UTR GCA 90 bp GTAGGAGAAGCAGGGCCTTTCTGGGCTGTGGTGGAAGGCAGCTGGGGAGGTGTCTGCATAGTATGGTTCTaGTTCCCTTTCAGTTATCTC +
Preference number: 4 (lower is better)
Translates to: VGEAGPFWAVVEGSWGGVCIVWF*FPFSYL
Trigger: GAGATAACTGAAAGGGAAGCAGAACCATACTATGCA...GACACCTCCCCAGCTGCCTTCCACCACAGCCCAGAAAGGCCCTGCTTCTCCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636437.1
CDS-3UTR CCA 90 bp TGGGTCAACATTCAATATGGACAGCCAGCTAGCTCACAAGAAATGAAATGTAATGATTCCGCGCTCCGGTaGGGCGGCGGGGCAAGCTGC +
Preference number: 4 (lower is better)
Translates to: WVNIQYGQPASSQEMKCNDSALR*GGGASC
Trigger: GCAGCTTGCCCCGCCGCCCCACCGGAGCGCGGAATC...ATTACATTTCATTTCTTGTGAGCTAGCTGGCTGTCCATATTGAATGTTGACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR CCA 90 bp GAGGTCCCGAGGAAGTTTCCAGGCGGCTTGAGTGGAAAAGTGAGTATTTCATCAACCTACTCCAAGCTATaGCTCCTCCTTCCGGCTCCC +
Preference number: 4 (lower is better)
Translates to: EVPRKFPGGLSGKVSISSTYSKL*LLLPAP
Trigger: GGGAGCCGGAAGGAGGAGCCATAGCTTGGAGTAGGT...TGATGAAATACTCACTTTTCCACTCAAGCCGCCTGGAAACTTCCTCGGGACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636335.1
ENST00000636437.1
CDS-3UTR CCA 90 bp CTTTCAGAGGTCCCGAGGAAGTTTCCAGGCGGCTTGAGTGGAAAAGTGAGTATTACCTACTCCAAGCTATaGCTCCTCCTTCCGGCTCCC +
Preference number: 4 (lower is better)
Translates to: LSEVPRKFPGGLSGKVSITYSKL*LLLPAP
Trigger: GGGAGCCGGAAGGAGGAGCCATAGCTTGGAGTAGGT...AATACTCACTTTTCCACTCAAGCCGCCTGGAAACTTCCTCGGGACCTCTGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636335.1
ENST00000636437.1
CDS-3UTR CCA 90 bp CTTTCAGAGGTCCCGAGGAAGTTTCCAGGCGGCTTGAGTGGAAAAGTGAGTATTATCCACATTCTGGGGTaGGAGAGCAGCCAGTGGCCT +
Preference number: 4 (lower is better)
Translates to: LSEVPRKFPGGLSGKVSIIHILG*ESSQWP
Trigger: AGGCCACTGGCTGCTCTCCCACCCCAGAATGTGGAT...AATACTCACTTTTCCACTCAAGCCGCCTGGAAACTTCCTCGGGACCTCTGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636335.1
ENST00000636437.1
CDS-3UTR CCA 90 bp AGACAAAGGCTGTGTCATGTGATCTTCCTGATAGGGCTGTTGACACAGGCCTCTATCCACATTCTGGGGTaGGAGAGCAGCCAGTGGCCT +
Preference number: 4 (lower is better)
Translates to: RQRLCHVIFLIGLLTQASIHILG*ESSQWP
Trigger: AGGCCACTGGCTGCTCTCCCACCCCAGAATGTGGAT...AGAGGCCTGTGTCAACAGCCCTATCAGGAAGATCACATGACACAGCCTTTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636335.1
ENST00000636437.1
CDS-3UTR GCA 90 bp GCTTCATTATATTTTACAGAAGACCTTCAGTGGTCCGGTAAGTCTTTCATGTCAGGCGGCGGGGCAAGCTaGCCGCCTGACACACTGTCC +
Preference number: 4 (lower is better)
Translates to: ASLYFTEDLQWSGKSFMSGGGAS*PPDTLS
Trigger: GGACAGTGTGTCAGGCGGGCAGCTTGCCCCGCCGCC...TGACATGAAAGACTTACCGGACCACTGAAGGTCTTCTGTAAAATATAATGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR GCA 90 bp AAAAGGGTGACATGCTCTGATAAATCCCATTTAAGGATGATTCTGTTCAGGCAAGGCGGCGGGGCAAGCTaGCCGCCTGACACACTGTCC +
Preference number: 4 (lower is better)
Translates to: KRVTCSDKSHLRMILFRQGGGAS*PPDTLS
Trigger: GGACAGTGTGTCAGGCGGGCAGCTTGCCCCGCCGCC...TTGCCTGAACAGAATCATCCTTAAATGGGATTTATCAGAGCATGTCACCCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR CCA 90 bp AGTTCTGCTCAGGGGCAGCCCTTTCAGAGGTCCCGAGGAAGTTTCCAGGCGGCTTTGATGGCCCAAAACTaGTCAAATCTGTCATTTTGC +
Preference number: 4 (lower is better)
Translates to: SSAQGQPFQRSRGSFQAALMAQN*SNLSFC
Trigger: GCAAAATGACAGATTTGACCAGTTTTGGGCCATCAA...AGCCGCCTGGAAACTTCCTCGGGACCTCTGAAAGGGCTGCCCCTGAGCAGAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000636335.1
ENST00000636437.1
CDS-3UTR CCA 90 bp AGAGTTCTGCTCAGGGGCAGCCCTTTCAGAGGTCCCGAGGAAGTTTCCAGGCGGTTGATGGCCCAAAACTaGTCAAATCTGTCATTTTGC +
Preference number: 4 (lower is better)
Translates to: RVLLRGSPFRGPEEVSRRLMAQN*SNLSFC
Trigger: GCAAAATGACAGATTTGACCAGTTTTGGGCCATCAA...CCGCCTGGAAACTTCCTCGGGACCTCTGAAAGGGCTGCCCCTGAGCAGAACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000636335.1
ENST00000636437.1
CDS-3UTR CCA 90 bp TTGAGGAGATCTCCTAGTGTGTGCAACTGTCCATCTGCAGCCACAGGACGAAACGCAGCGAAGTGTTTCTaGTCAGGTTGCCTCCACCAA +
Preference number: 4 (lower is better)
Translates to: LRRSPSVCNCPSAATGRNAAKCF*SGCLHQ
Trigger: TTGGTGGAGGCAACCTGACCAGAAACACTTCGCTGC...GTTTCGTCCTGTGGCTGCAGATGGACAGTTGCACACACTAGGAGATCTCCTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369070.5
ENST00000646025.1
CDS-3UTR CCA 90 bp TTTCATGAGCTAAAGTTCAACCATGGTCACCTTAGGAAATACCCCTGTTTATTTGATTCCGCGCTCCGGTaGGGCGGCGGGGCAAGCTGC +
Preference number: 4 (lower is better)
Translates to: FHELKFNHGHLRKYPCLFDSALR*GGGASC
Trigger: GCAGCTTGCCCCGCCGCCCCACCGGAGCGCGGAATC...AAATAAACAGGGGTATTTCCTAAGGTGACCATGGTTGAACTTTAGCTCATGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR CCA 90 bp AAAAGGGTGACATGCTCTGATAAATCCCATTTAAGGATGATTCTGTTCAGGCAAGGCTCCCCGCACTGGTaGGGACGCCCAGATTCCGCG +
Preference number: 4 (lower is better)
Translates to: KRVTCSDKSHLRMILFRQGSPHW*GRPDSA
Trigger: CGCGGAATCTGGGCGTCCCCACCAGTGCGGGGAGCC...TTGCCTGAACAGAATCATCCTTAAATGGGATTTATCAGAGCATGTCACCCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR CCA 90 bp CTGGCTGCCAGGGACCACAGTGAAAAATTAGACCTGGAGCCAATGAAAAACACTACCTACTCCAAGCTATaGCTCCTCCTTCCGGCTCCC +
Preference number: 4 (lower is better)
Translates to: LAARDHSEKLDLEPMKNTTYSKL*LLLPAP
Trigger: GGGAGCCGGAAGGAGGAGCCATAGCTTGGAGTAGGT...AGTGTTTTTCATTGGCTCCAGGTCTAATTTTTCACTGTGGTCCCTGGCAGCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR CCA 90 bp GGATCAATAGCAGAAGGACAAACTTCTTTGAGGAGATCTCCTAGTGTGTGCAACAACGCTGCGGAGCCCTaGCAGCGCACCACAAGTCCA +
Preference number: 4 (lower is better)
Translates to: GSIAEGQTSLRRSPSVCNNAAEP*QRTTSP
Trigger: TGGACTTGTGGTGCGCTGCCAGGGCTCCGCAGCGTT...GTTGCACACACTAGGAGATCTCCTCAAAGAAGTTTGTCCTTCTGCTATTGATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369070.5
ENST00000646025.1
CDS-3UTR CCA 90 bp CTTTCAGAGGTCCCGAGGAAGTTTCCAGGCGGCTTGAGTGGAAAAGTGAGTATTGTGCTTCAGTCTGATTaGGGGTGCGGGGGAAGATCT +
Preference number: 4 (lower is better)
Translates to: LSEVPRKFPGGLSGKVSIVLQSD*GCGGRS
Trigger: AGATCTTCCCCCGCACCCCCAATCAGACTGAAGCAC...AATACTCACTTTTCCACTCAAGCCGCCTGGAAACTTCCTCGGGACCTCTGAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000636437.1
CDS-3UTR TCA 90 bp GGAGAGTTCTGCTCAGGGGCAGCCCTTTCAGAGGTCCCGAGGAAGTTTCCAGGCTCAGTTATCTCATCCTaGTATAGCGTGAAACAAGTT +
Preference number: 4 (lower is better)
Translates to: GEFCSGAALSEVPRKFPGSVISS*YSVKQV
Trigger: AACTTGTTTCACGCTATATCAGGATGAGATAACTGA...GCCTGGAAACTTCCTCGGGACCTCTGAAAGGGCTGCCCCTGAGCAGAACTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636335.1
ENST00000636437.1
CDS-3UTR TCA 90 bp AGCGAAGTGTTTCTGGTCAGGTTGCCTCCACCAAACCTGATTGAAGCAAAAGGGGGAGGAAAGCAGAGGTaGTGCAAAGTAAGACCAGCC +
Preference number: 4 (lower is better)
Translates to: SEVFLVRLPPPNLIEAKGGGKQR*CKVRPA
Trigger: GGCTGGTCTTACTTTGCATCACCTCTGCTTTCCTCC...CCCTTTTGCTTCAATCAGGTTTGGTGGAGGCAACCTGACCAGAAACACTTCGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR TCA 90 bp GCTTCATTATATTTTACAGAAGACCTTCAGTGGTCCGGTAAGTCTTTCATGTCACGCGGAGGTCGGAGCTaGACCCTGCTGCACTTCCGC +
Preference number: 4 (lower is better)
Translates to: ASLYFTEDLQWSGKSFMSRGGRS*TLLHFR
Trigger: GCGGAAGTGCAGCAGGGTTCAGCTCCGACCTCCGCG...TGACATGAAAGACTTACCGGACCACTGAAGGTCTTCTGTAAAATATAATGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR TCA 90 bp TCAGAGGTCCCGAGGAAGTTTCCAGGCGGCTTGAGTGGAAAAGTGAGTATTTCAGACACAGGCCTCTTGTaGAGATCCACATTCTGGGGT +
Preference number: 4 (lower is better)
Translates to: SEVPRKFPGGLSGKVSISDTGLL*RSTFWG
Trigger: ACCCCAGAATGTGGATCTTCACAAGAGGCCTGTGTC...TGAAATACTCACTTTTCCACTCAAGCCGCCTGGAAACTTCCTCGGGACCTCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636335.1
ENST00000636437.1
CDS-3UTR GCA 90 bp TGGCAGTGGAGGAAAGCAGAGGTGATGCAAAGTAAGACCAGCCCAGTTGCCTTAAGATCTCCTAGTGTGTaGAACTGTCCATCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: WQWRKAEVMQSKTSPVALRSPSV*NCPSAA
Trigger: GGCTGCAGATGGACAGTTGCACACACTAGGAGATCT...TAAGGCAACTGGGCTGGTCTTACTTTGCATCACCTCTGCTTTCCTCCACTGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR GCA 90 bp CTGTCTGGCTTGCAGCAGCGAAGTGTTTCTGGTCAGGTTGCCTCCACCAAACCTAGACAAGTAATCCTATaGCCTATATCCACCCCATGC +
Preference number: 4 (lower is better)
Translates to: LSGLQQRSVSGQVASTKPRQVIL*PISTPC
Trigger: GCATGGGGTGGATATAGGGCATAGGATTACTTGTCT...AGGTTTGGTGGAGGCAACCTGACCAGAAACACTTCGCTGCTGCAAGCCAGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR GCA 90 bp CCACTGCAGAGGTGTTTCCAACATTGGCTCAATTCCATGAATCATCACTTGATTCCTGACACACTGTCCTaGGGGGACGCGGTAGCAGGA +
Preference number: 4 (lower is better)
Translates to: PLQRCFQHWLNSMNHHLIPDTLS*GDAVAG
Trigger: TCCTGCTACCGCGTCCCCGCAGGACAGTGTGTCAGG...AATCAAGTGATGATTCATGGAATTGAGCCAATGTTGGAAACACCTCTGCAGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360666.6
ENST00000369070.5
ENST00000646025.1
CDS-3UTR CCA 90 bp TACCCCTGTTTATTTGTTAATCAGAAATACAAATCGAGTGGCACATACTTCCATGATTCCGCGCTCCGGTaGGGCGGCGGGGCAAGCTGC +
Preference number: 4 (lower is better)
Translates to: YPCLFVNQKYKSSGTYFHDSALR*GGGASC
Trigger: GCAGCTTGCCCCGCCGCCCCACCGGAGCGCGGAATC...ATGGAAGTATGTGCCACTCGATTTGTATTTCTGATTAACAAATAAACAGGGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR CCA 90 bp GCTTCATTATATTTTACAGAAGACCTTCAGTGGTCCGGTAAGTCTTTCATGTCATCCGGCTCCCCGCACTaGTGGGGACGCCCAGATTCC +
Preference number: 4 (lower is better)
Translates to: ASLYFTEDLQWSGKSFMSSGSPH*WGRPDS
Trigger: GGAATCTGGGCGTCCCCACCAGTGCGGGGAGCCGGA...TGACATGAAAGACTTACCGGACCACTGAAGGTCTTCTGTAAAATATAATGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR TCA 90 bp CTGTCTGGCTTGCAGCAGCGAAGTGTTTCTGGTCAGGTTGCCTCCACCAAACCTAAGGACAAACTTCTTTaGGGAGATCTCCTAGTGTGT +
Preference number: 4 (lower is better)
Translates to: LSGLQQRSVSGQVASTKPKDKLL*GDLLVC
Trigger: ACACACTAGGAGATCTCCTCAAAGAAGTTTGTCCTT...AGGTTTGGTGGAGGCAACCTGACCAGAAACACTTCGCTGCTGCAAGCCAGACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR TCA 90 bp AGCGAAGTGTTTCTGGTCAGGTTGCCTCCACCAAACCTGATTGAAGCAAAAGGGTGCCTCCACCAAACCTaGTTGAAGCAAAAGGGTGAC +
Preference number: 4 (lower is better)
Translates to: SEVFLVRLPPPNLIEAKGCLHQT*LKQKGD
Trigger: GTCACCCTTTTGCTTCAATCAGGTTTGGTGGAGGCA...CCCTTTTGCTTCAATCAGGTTTGGTGGAGGCAACCTGACCAGAAACACTTCGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR TCA 90 bp AGCGAAGTGTTTCTGGTCAGGTTGCCTCCACCAAACCTGATTGAAGCAAAAGGGTCCACCCCATGCCAATaGCGACCAGTCAAAATGGTA +
Preference number: 4 (lower is better)
Translates to: SEVFLVRLPPPNLIEAKGSTPCQ*RPVKMV
Trigger: TACCATTTTGACTGGTCGTCATTGGCATGGGGTGGA...CCCTTTTGCTTCAATCAGGTTTGGTGGAGGCAACCTGACCAGAAACACTTCGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR TCA 90 bp CATGTGATCTTCCTGATAGGGCTGTTGACACAGGCCTCTTGTGAAGATCCACATGACACAGGCCTCTTGTaGAGATCCACATTCTGGGGT +
Preference number: 4 (lower is better)
Translates to: HVIFLIGLLTQASCEDPHDTGLL*RSTFWG
Trigger: ACCCCAGAATGTGGATCTTCACAAGAGGCCTGTGTC...ATGTGGATCTTCACAAGAGGCCTGTGTCAACAGCCCTATCAGGAAGATCACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636335.1
ENST00000636437.1
CDS-3UTR TCA 90 bp CCTTTCAGAGGTCCCGAGGAAGTTTCCAGGCGGCTTGAGTGGAAAAGTGAGTATATGTGTTCCATTTTCTaGTGCCCTTGGCTGGGCTTT +
Preference number: 4 (lower is better)
Translates to: PFRGPEEVSRRLEWKSEYMCSIF*CPWLGF
Trigger: AAAGCCCAGCCAAGGGCATCAGAAAATGGAACACAT...ATACTCACTTTTCCACTCAAGCCGCCTGGAAACTTCCTCGGGACCTCTGAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636335.1
CDS-3UTR GCA 90 bp AGGCTGTGTCATGTGATCTTCCTGATAGGGCTGTTGACACAGGCCTCTTGTGAAAGATCTCCTAGTGTGTaGAACTGTCCATCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: RLCHVIFLIGLLTQASCERSPSV*NCPSAA
Trigger: GGCTGCAGATGGACAGTTGCACACACTAGGAGATCT...TTCACAAGAGGCCTGTGTCAACAGCCCTATCAGGAAGATCACATGACACAGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636335.1
ENST00000636437.1
CDS-3UTR GCA 90 bp TTTTCCCCATCTTCAGGATCAATAGCAGAAGGACAAACTTCTTTGAGGAGATCTGTCGGAGCTGAACCCTaGTGCACTTCCGCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: FSPSSGSIAEGQTSLRRSVGAEP*CTSALW
Trigger: CCAGAGGGCGGAAGTGCAGCAGGGTTCAGCTCCGAC...AGATCTCCTCAAAGAAGTTTGTCCTTCTGCTATTGATCCTGAAGATGGGGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369070.5
ENST00000646025.1
CDS-3UTR CCA 90 bp TCAAATCTAGATCAGAAGTTCACTCAAGCCTACTGCAAAGGCCTGACACTGGTTACCTACTCCAAGCTATaGCTCCTCCTTCCGGCTCCC +
Preference number: 4 (lower is better)
Translates to: SNLDQKFTQAYCKGLTLVTYSKL*LLLPAP
Trigger: GGGAGCCGGAAGGAGGAGCCATAGCTTGGAGTAGGT...AACCAGTGTCAGGCCTTTGCAGTAGGCTTGAGTGAACTTCTGATCTAGATTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR CCA 90 bp TCAGGATCAATAGCAGAAGGACAAACTTCTTTGAGGAGATCTCCTAGTGTGTGCACCTACTCCAAGCTATaGCTCCTCCTTCCGGCTCCC +
Preference number: 4 (lower is better)
Translates to: SGSIAEGQTSLRRSPSVCTYSKL*LLLPAP
Trigger: GGGAGCCGGAAGGAGGAGCCATAGCTTGGAGTAGGT...GCACACACTAGGAGATCTCCTCAAAGAAGTTTGTCCTTCTGCTATTGATCCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369070.5
ENST00000646025.1
CDS-3UTR CCA 90 bp GAGACAAAGGCTGTGTCATGTGATCTTCCTGATAGGGCTGTTGACACAGGCCTCTTCAGAAGAAGGAGGTaGTTGGTCTCCAAGGTGATC +
Preference number: 4 (lower is better)
Translates to: ETKAVSCDLPDRAVDTGLFRRRR*LVSKVI
Trigger: GATCACCTTGGAGACCAACCACCTCCTTCTTCTGAA...GAGGCCTGTGTCAACAGCCCTATCAGGAAGATCACATGACACAGCCTTTGTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636437.1
CDS-3UTR CCA 90 bp ATAGGGCTGTTGACACAGGCCTCTTGTGAAGATCCACATTCTGGGGTGGGAGAGCTCTTAATCTTCTCCTaGTGGGATCTCTTCAGGATC +
Preference number: 4 (lower is better)
Translates to: IGLLTQASCEDPHSGVGELLIFS*WDLFRI
Trigger: GATCCTGAAGAGATCCCACCAGGAGAAGATTAAGAG...CTCTCCCACCCCAGAATGTGGATCTTCACAAGAGGCCTGTGTCAACAGCCCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636335.1
3UTR CAA 72 bp CAAAGGCTGTGTCATGTGATCTTCCTGATAGGGCTGTaGACACAGGCCTCTTGTGAAGATCCACATTCTGGG +
Preference number: 4 (lower is better)
Translates to: QRLCHVIFLIGL*TQASCEDPHSG
Trigger: CCCAGAATGTGGATCTTCACAAGAGGCCTGTGTCAACAGCCCTATCAGGAAGATCACATGACACAGCCTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636335.1
ENST00000636437.1
3UTR CAA 72 bp AAGGAGGTGGTTGGTCTCCAAGGTGATCAAAGCAACTaGTCTTTCATTTCCATGGAGGGAGGACAGTGGGCT +
Preference number: 4 (lower is better)
Translates to: KEVVGLQGDQSN*SFISMEGGQWA
Trigger: AGCCCACTGTCCTCCCTCCATGGAAATGAAAGACAAGTTGCTTTGATCACCTTGGAGACCAACCACCTCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636437.1
CDS-3UTR TCA 90 bp CCTTTCAGAGGTCCCGAGGAAGTTTCCAGGCGGCTTGAGTGGAAAAGTGAGTATGGACGAAACAGCTTCTaGATGAAAGGTCTTTCAGTC +
Preference number: 4 (lower is better)
Translates to: PFRGPEEVSRRLEWKSEYGRNSF*MKGLSV
Trigger: GACTGAAAGACCTTTCATTCAGAAGCTGTTTCGTCC...ATACTCACTTTTCCACTCAAGCCGCCTGGAAACTTCCTCGGGACCTCTGAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636335.1
ENST00000636437.1
CDS-3UTR TCA 90 bp ATGACAGCTTCTGAGACAAGTAATCCTATGCCCTATATCCACCCCATGCCAATGGGAGGAAAGCAGAGGTaGTGCAAAGTAAGACCAGCC +
Preference number: 4 (lower is better)
Translates to: MTASETSNPMPYIHPMPMGGKQR*CKVRPA
Trigger: GGCTGGTCTTACTTTGCATCACCTCTGCTTTCCTCC...CATTGGCATGGGGTGGATATAGGGCATAGGATTACTTGTCTCAGAAGCTGTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR TCA 90 bp CTGTCTGGCTTGCAGCAGCGAAGTGTTTCTGGTCAGGTTGCCTCCACCAAACCTATGTTTCCACTTTCATaGGCTAAAGTTCAACCATGG +
Preference number: 4 (lower is better)
Translates to: LSGLQQRSVSGQVASTKPMFPLS*AKVQPW
Trigger: CCATGGTTGAACTTTAGCTCATGAAAGTGGAAACAT...AGGTTTGGTGGAGGCAACCTGACCAGAAACACTTCGCTGCTGCAAGCCAGACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR TCA 90 bp CTGTCTGGCTTGCAGCAGCGAAGTGTTTCTGGTCAGGTTGCCTCCACCAAACCTATGCACAAATATGTTTaGCTGGTAAAATCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: LSGLQQRSVSGQVASTKPMHKYV*LVKSQR
Trigger: CCTCTGGGATTTTACCAGTCAAACATATTTGTGCAT...AGGTTTGGTGGAGGCAACCTGACCAGAAACACTTCGCTGCTGCAAGCCAGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR TCA 90 bp ACCCCTGTTTATTTGTTAATCAGAAATACAAATCGAGTGGCACATACTTCCATTCGCGGAGGTCGGAGCTaGACCCTGCTGCACTTCCGC +
Preference number: 4 (lower is better)
Translates to: TPVYLLIRNTNRVAHTSIRGGRS*TLLHFR
Trigger: GCGGAAGTGCAGCAGGGTTCAGCTCCGACCTCCGCG...AATGGAAGTATGTGCCACTCGATTTGTATTTCTGATTAACAAATAAACAGGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR GCA 90 bp CAGAAATACAAATCGAGTGGCACATACTTCCATTTTCTTCTTAGGCCAAAGGTTCCTGACACACTGTCCTaGGGGGACGCGGTAGCAGGA +
Preference number: 4 (lower is better)
Translates to: QKYKSSGTYFHFLLRPKVPDTLS*GDAVAG
Trigger: TCCTGCTACCGCGTCCCCGCAGGACAGTGTGTCAGG...AACCTTTGGCCTAAGAAGAAAATGGAAGTATGTGCCACTCGATTTGTATTTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR GCA 90 bp AATACAAATCGAGTGGCACATACTTCCATTTTCTTCTTAGGCCAAAGGTTTCAGGTCGGAGCTGAACCCTaGTGCACTTCCGCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: NTNRVAHTSIFFLGQRFQVGAEP*CTSALW
Trigger: CCAGAGGGCGGAAGTGCAGCAGGGTTCAGCTCCGAC...CTGAAACCTTTGGCCTAAGAAGAAAATGGAAGTATGTGCCACTCGATTTGTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR GCA 90 bp TGGGTCAACATTCAATATGGACAGCCAGCTAGCTCACAAGAAATGAAATGTAATGTCGGAGCTGAACCCTaGTGCACTTCCGCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: WVNIQYGQPASSQEMKCNVGAEP*CTSALW
Trigger: CCAGAGGGCGGAAGTGCAGCAGGGTTCAGCTCCGAC...ATTACATTTCATTTCTTGTGAGCTAGCTGGCTGTCCATATTGAATGTTGACCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR GCA 90 bp TTGAGGAGATCTCCTAGTGTGTGCAACTGTCCATCTGCAGCCACAGGACGAAACCAGTCGTTGTCATTTTaGAATCCCATCCAGAGTTGC +
Preference number: 4 (lower is better)
Translates to: LRRSPSVCNCPSAATGRNQSLSF*NPIQSC
Trigger: GCAACTCTGGATGGGATTGCAAAATGACAACGACTG...GTTTCGTCCTGTGGCTGCAGATGGACAGTTGCACACACTAGGAGATCTCCTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613993.1
CDS-3UTR GCA 90 bp TGGCAGTGGAGGAAAGCAGAGGTGATGCAAAGTAAGACCAGCCCAGTTGCCTTAGATTCCCACCCACACTaGTGTGACCTGATATATTCT +
Preference number: 4 (lower is better)
Translates to: WQWRKAEVMQSKTSPVALDSHPH*CDLIYS
Trigger: AGAATATATCAGGTCACAGCAGTGTGGGTGGGAATC...TAAGGCAACTGGGCTGGTCTTACTTTGCATCACCTCTGCTTTCCTCCACTGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646025.1
CDS-3UTR CCA 90 bp ATCTCTCACTGTTCATTATCAAAGTTACAAGATTGCATACCAATAGACAGACTGTCCGGCTCCCCGCACTaGTGGGGACGCCCAGATTCC +
Preference number: 4 (lower is better)
Translates to: ISHCSLSKLQDCIPIDRLSGSPH*WGRPDS
Trigger: GGAATCTGGGCGTCCCCACCAGTGCGGGGAGCCGGA...CAGTCTGTCTATTGGTATGCAATCTTGTAACTTTGATAATGAACAGTGAGAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR CCA 90 bp CTTCAGTGGTCCGGTAAGTCTTTCATGTCACAGCTGAGGTTTAATGATGGCAGTCTAGCTTGGAACCTCTaGATTCCCACCCACACTGCT +
Preference number: 4 (lower is better)
Translates to: LQWSGKSFMSQLRFNDGSLAWNL*IPTHTA
Trigger: AGCAGTGTGGGTGGGAATCCAGAGGTTCCAAGCTAG...ACTGCCATCATTAAACCTCAGCTGTGACATGAAAGACTTACCGGACCACTGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646025.1
CDS-3UTR TCA 90 bp TGGCAGTGGAGGAAAGCAGAGGTGATGCAAAGTAAGACCAGCCCAGTTGCCTTAAAGGACAAACTTCTTTaGGGAGATCTCCTAGTGTGT +
Preference number: 4 (lower is better)
Translates to: WQWRKAEVMQSKTSPVALKDKLL*GDLLVC
Trigger: ACACACTAGGAGATCTCCTCAAAGAAGTTTGTCCTT...TAAGGCAACTGGGCTGGTCTTACTTTGCATCACCTCTGCTTTCCTCCACTGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR TCA 90 bp TATTTTACAGAAGACCTTCAGTGGTCCGGTAAGTCTTTCATGTCACAGCTGAGGGGAGGAAAGCAGAGGTaGTGCAAAGTAAGACCAGCC +
Preference number: 4 (lower is better)
Translates to: YFTEDLQWSGKSFMSQLRGGKQR*CKVRPA
Trigger: GGCTGGTCTTACTTTGCATCACCTCTGCTTTCCTCC...CCTCAGCTGTGACATGAAAGACTTACCGGACCACTGAAGGTCTTCTGTAAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR GCA 90 bp CTGTCTGGCTTGCAGCAGCGAAGTGTTTCTGGTCAGGTTGCCTCCACCAAACCTAAAATGAGCTTCAATTaGATCCTTAGATGGACAGTG +
Preference number: 4 (lower is better)
Translates to: LSGLQQRSVSGQVASTKPKMSFN*ILRWTV
Trigger: CACTGTCCATCTAAGGATGCAATTGAAGCTCATTTT...AGGTTTGGTGGAGGCAACCTGACCAGAAACACTTCGCTGCTGCAAGCCAGACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR GCA 90 bp CTGGCTGCCAGGGACCACAGTGAAAAATTAGACCTGGAGCCAATGAAAAACACTTTCACTCAAGCCTACTaGAAAGGCCTGACACTGGTT +
Preference number: 4 (lower is better)
Translates to: LAARDHSEKLDLEPMKNTFTQAY*KGLTLV
Trigger: AACCAGTGTCAGGCCTTTGCAGTAGGCTTGAGTGAA...AGTGTTTTTCATTGGCTCCAGGTCTAATTTTTCACTGTGGTCCCTGGCAGCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR GCA 90 bp AAAGCAGAGGTGATGCAAAGTAAGACCAGCCCAGTTGCCTTATCTGACATGGAAGTATTGTGGACTCACTaGGTCCACTGTTTGCGAGCT +
Preference number: 4 (lower is better)
Translates to: KAEVMQSKTSPVALSDMEVLWTH*VHCLRA
Trigger: AGCTCGCAAACAGTGGACGCAGTGAGTCCACAATAC...TTCCATGTCAGATAAGGCAACTGGGCTGGTCTTACTTTGCATCACCTCTGCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646025.1
CDS-3UTR CCA 90 bp TCAAATCTAGATCAGAAGTTCACTCAAGCCTACTGCAAAGGCCTGACACTGGTTGCAGCGAAGTGTTTCTaGTCAGGTTGCCTCCACCAA +
Preference number: 4 (lower is better)
Translates to: SNLDQKFTQAYCKGLTLVAAKCF*SGCLHQ
Trigger: TTGGTGGAGGCAACCTGACCAGAAACACTTCGCTGC...AACCAGTGTCAGGCCTTTGCAGTAGGCTTGAGTGAACTTCTGATCTAGATTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR CCA 90 bp TCAGGATCAATAGCAGAAGGACAAACTTCTTTGAGGAGATCTCCTAGTGTGTGCTGCACTTCCGCCCTCTaGTATCCAGCGAATACAACC +
Preference number: 4 (lower is better)
Translates to: SGSIAEGQTSLRRSPSVCCTSAL*YPANTT
Trigger: GGTTGTATTCGCTGGATACCAGAGGGCGGAAGTGCA...GCACACACTAGGAGATCTCCTCAAAGAAGTTTGTCCTTCTGCTATTGATCCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369070.5
ENST00000646025.1
CDS-3UTR CCA 90 bp GAGGTCCCGAGGAAGTTTCCAGGCGGCTTGAGTGGAAAAGTGAGTATTTCATCATCCAGGCGGCTTGAGTaGAAAAGTGAGTATTTCATC +
Preference number: 4 (lower is better)
Translates to: EVPRKFPGGLSGKVSISSSRRLE*KSEYFI
Trigger: GATGAAATACTCACTTTTCCACTCAAGCCGCCTGGA...TGATGAAATACTCACTTTTCCACTCAAGCCGCCTGGAAACTTCCTCGGGACCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636335.1
ENST00000636437.1
CDS-3UTR CCA 90 bp TTCAGAGGTCCCGAGGAAGTTTCCAGGCGGCTTGAGTGGAAAAGTGAGTATTTCTCCAGGCGGCTTGAGTaGAAAAGTGAGTATTTCATC +
Preference number: 4 (lower is better)
Translates to: FRGPEEVSRRLEWKSEYFSRRLE*KSEYFI
Trigger: GATGAAATACTCACTTTTCCACTCAAGCCGCCTGGA...GAAATACTCACTTTTCCACTCAAGCCGCCTGGAAACTTCCTCGGGACCTCTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636335.1
ENST00000636437.1
CDS-3UTR TCA 90 bp TCAAATCTAGATCAGAAGTTCACTCAAGCCTACTGCAAAGGCCTGACACTGGTTTGCCTCCACCAAACCTaGTTGAAGCAAAAGGGTGAC +
Preference number: 4 (lower is better)
Translates to: SNLDQKFTQAYCKGLTLVCLHQT*LKQKGD
Trigger: GTCACCCTTTTGCTTCAATCAGGTTTGGTGGAGGCA...AACCAGTGTCAGGCCTTTGCAGTAGGCTTGAGTGAACTTCTGATCTAGATTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR TCA 90 bp GAAGACCTTCAGTGGTCCGGTAAGTCTTTCATGTCACAGCTGAGGTTTAATGATTCCACCCCATGCCAATaGCGACCAGTCAAAATGGTA +
Preference number: 4 (lower is better)
Translates to: EDLQWSGKSFMSQLRFNDSTPCQ*RPVKMV
Trigger: TACCATTTTGACTGGTCGTCATTGGCATGGGGTGGA...ATCATTAAACCTCAGCTGTGACATGAAAGACTTACCGGACCACTGAAGGTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR TCA 90 bp AGCGAAGTGTTTCTGGTCAGGTTGCCTCCACCAAACCTGATTGAAGCAAAAGGGAACCATGATCGTGTCTaGTACTGTAAGCCTTTTAGC +
Preference number: 4 (lower is better)
Translates to: SEVFLVRLPPPNLIEAKGNHDRV*YCKPFS
Trigger: GCTAAAAGGCTTACAGTATCAGACACGATCATGGTT...CCCTTTTGCTTCAATCAGGTTTGGTGGAGGCAACCTGACCAGAAACACTTCGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR TCA 90 bp TGGCAGTGGAGGAAAGCAGAGGTGATGCAAAGTAAGACCAGCCCAGTTGCCTTATTGCTTCTAAGTTTCTaGGATTGTATGCTGTACTGG +
Preference number: 4 (lower is better)
Translates to: WQWRKAEVMQSKTSPVALLLLSF*DCMLYW
Trigger: CCAGTACAGCATACAATCTCAGAAACTTAGAAGCAA...TAAGGCAACTGGGCTGGTCTTACTTTGCATCACCTCTGCTTTCCTCCACTGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR TCA 90 bp ATGACAGCTTCTGAGACAAGTAATCCTATGCCCTATATCCACCCCATGCCAATGCCTACTGCAAAGGCCTaGCACTGGTTTTGTCTGTAT +
Preference number: 4 (lower is better)
Translates to: MTASETSNPMPYIHPMPMPTAKA*HWFCLY
Trigger: ATACAGACAAAACCAGTGTCAGGCCTTTGCAGTAGG...CATTGGCATGGGGTGGATATAGGGCATAGGATTACTTGTCTCAGAAGCTGTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR TCA 90 bp AGGCTGTGTCATGTGATCTTCCTGATAGGGCTGTTGACACAGGCCTCTTGTGAAGCGCCTCCAAATATCTaGTTATTTACCTTGAGCAAG +
Preference number: 4 (lower is better)
Translates to: RLCHVIFLIGLLTQASCEAPPNI*LFTLSK
Trigger: CTTGCTCAAGGTAAATAATCAGATATTTGGAGGCGC...TTCACAAGAGGCCTGTGTCAACAGCCCTATCAGGAAGATCACATGACACAGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636437.1
CDS-3UTR GCA 90 bp AATACAAATCGAGTGGCACATACTTCCATTTTCTTCTTAGGCCAAAGGTTTCAGTCGCCAACTCCACCTTaGCCGGAGGAACCACCTTCA +
Preference number: 4 (lower is better)
Translates to: NTNRVAHTSIFFLGQRFQSPTPP*PEEPPS
Trigger: TGAAGGTGGTTCCTCCGGGCAAGGTGGAGTTGGCGA...CTGAAACCTTTGGCCTAAGAAGAAAATGGAAGTATGTGCCACTCGATTTGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343245.7
CDS-3UTR GCA 90 bp ATCTCTCACTGTTCATTATCAAAGTTACAAGATTGCATACCAATAGACAGACTGCCTGACACACTGTCCTaGGGGGACGCGGTAGCAGGA +
Preference number: 4 (lower is better)
Translates to: ISHCSLSKLQDCIPIDRLPDTLS*GDAVAG
Trigger: TCCTGCTACCGCGTCCCCGCAGGACAGTGTGTCAGG...CAGTCTGTCTATTGGTATGCAATCTTGTAACTTTGATAATGAACAGTGAGAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR GCA 90 bp TACCCCTGTTTATTTGTTAATCAGAAATACAAATCGAGTGGCACATACTTCCATCCTGACACACTGTCCTaGGGGGACGCGGTAGCAGGA +
Preference number: 4 (lower is better)
Translates to: YPCLFVNQKYKSSGTYFHPDTLS*GDAVAG
Trigger: TCCTGCTACCGCGTCCCCGCAGGACAGTGTGTCAGG...ATGGAAGTATGTGCCACTCGATTTGTATTTCTGATTAACAAATAAACAGGGGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR GCA 90 bp GCTTCATTATATTTTACAGAAGACCTTCAGTGGTCCGGTAAGTCTTTCATGTCAGGAGCTGAACCCTGCTaGACTTCCGCCCTCTGGTAT +
Preference number: 4 (lower is better)
Translates to: ASLYFTEDLQWSGKSFMSGAEPC*TSALWY
Trigger: ATACCAGAGGGCGGAAGTGCAGCAGGGTTCAGCTCC...TGACATGAAAGACTTACCGGACCACTGAAGGTCTTCTGTAAAATATAATGAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR GCA 90 bp AATACAAATCGAGTGGCACATACTTCCATTTTCTTCTTAGGCCAAAGGTTTCAGGGAGCTGAACCCTGCTaGACTTCCGCCCTCTGGTAT +
Preference number: 4 (lower is better)
Translates to: NTNRVAHTSIFFLGQRFQGAEPC*TSALWY
Trigger: ATACCAGAGGGCGGAAGTGCAGCAGGGTTCAGCTCC...CTGAAACCTTTGGCCTAAGAAGAAAATGGAAGTATGTGCCACTCGATTTGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR GCA 90 bp TTCAGAGGTCCCGAGGAAGTTTCCAGGCGGCTTGAGTGGAAAAGTGAGTATTTCGTATTTCATCACCAGTaGGAGAGTCTTAGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: FRGPEEVSRRLEWKSEYFVFHHQ*ESLSLQ
Trigger: CTGAAGACTAAGACTCTCGCACTGGTGATGAAATAC...GAAATACTCACTTTTCCACTCAAGCCGCCTGGAAACTTCCTCGGGACCTCTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636437.1
CDS-3UTR GCA 90 bp TTCCTGATAGGGCTGTTGACACAGGCCTCTTGTGAAGATCCACATTCTGGGGTGGTAAGAATATCTTTGTaGTTCAGTCTGATTGGGGGT +
Preference number: 4 (lower is better)
Translates to: FLIGLLTQASCEDPHSGVVRISL*FSLIGG
Trigger: ACCCCCAATCAGACTGAAGCACAAAGATATTCTTAC...CACCCCAGAATGTGGATCTTCACAAGAGGCCTGTGTCAACAGCCCTATCAGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636437.1
CDS-3UTR CCA 90 bp TGGCAGTGGAGGAAAGCAGAGGTGATGCAAAGTAAGACCAGCCCAGTTGCCTTATTGATGGCCCAAAACTaGTCAAATCTGTCATTTTGC +
Preference number: 4 (lower is better)
Translates to: WQWRKAEVMQSKTSPVALLMAQN*SNLSFC
Trigger: GCAAAATGACAGATTTGACCAGTTTTGGGCCATCAA...TAAGGCAACTGGGCTGGTCTTACTTTGCATCACCTCTGCTTTCCTCCACTGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR CCA 90 bp CCACTGCAGAGGTGTTTCCAACATTGGCTCAATTCCATGAATCATCACTTGATTGCAGCGAAGTGTTTCTaGTCAGGTTGCCTCCACCAA +
Preference number: 4 (lower is better)
Translates to: PLQRCFQHWLNSMNHHLIAAKCF*SGCLHQ
Trigger: TTGGTGGAGGCAACCTGACCAGAAACACTTCGCTGC...AATCAAGTGATGATTCATGGAATTGAGCCAATGTTGGAAACACCTCTGCAGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360666.6
ENST00000369070.5
ENST00000646025.1
CDS-3UTR CCA 90 bp TTGAGGAGATCTCCTAGTGTGTGCAACTGTCCATCTGCAGCCACAGGACGAAACTTGCCTTATCTGACATaGAATCTTTTTCCTGTCTGG +
Preference number: 4 (lower is better)
Translates to: LRRSPSVCNCPSAATGRNLPYLT*NLFPVW
Trigger: CCAGACAGGAAAAAGATTCCATGTCAGATAAGGCAA...GTTTCGTCCTGTGGCTGCAGATGGACAGTTGCACACACTAGGAGATCTCCTCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369070.5
ENST00000646025.1
CDS-3UTR CCA 90 bp CTGTCTGGCTTGCAGCAGCGAAGTGTTTCTGGTCAGGTTGCCTCCACCAAACCTGAAATACAAATCGAGTaGCACATACTTCCATTTTCT +
Preference number: 4 (lower is better)
Translates to: LSGLQQRSVSGQVASTKPEIQIE*HILPFS
Trigger: AGAAAATGGAAGTATGTGCCACTCGATTTGTATTTC...AGGTTTGGTGGAGGCAACCTGACCAGAAACACTTCGCTGCTGCAAGCCAGACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR CCA 90 bp ACCCCTGTTTATTTGTTAATCAGAAATACAAATCGAGTGGCACATACTTCCATTAACGCTGCGGAGCCCTaGCAGCGCACCACAAGTCCA +
Preference number: 4 (lower is better)
Translates to: TPVYLLIRNTNRVAHTSINAAEP*QRTTSP
Trigger: TGGACTTGTGGTGCGCTGCCAGGGCTCCGCAGCGTT...AATGGAAGTATGTGCCACTCGATTTGTATTTCTGATTAACAAATAAACAGGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369070.5
ENST00000646025.1
CDS-3UTR TCA 90 bp TGGCAGTGGAGGAAAGCAGAGGTGATGCAAAGTAAGACCAGCCCAGTTGCCTTATCAGTTATCTCATCCTaGTATAGCGTGAAACAAGTT +
Preference number: 4 (lower is better)
Translates to: WQWRKAEVMQSKTSPVALSVISS*YSVKQV
Trigger: AACTTGTTTCACGCTATATCAGGATGAGATAACTGA...TAAGGCAACTGGGCTGGTCTTACTTTGCATCACCTCTGCTTTCCTCCACTGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR TCA 90 bp GACCTAGTTTCCTGTGTCTCTAGTTGTTCTCCCGCACCGAACCATTCAGGTAGGTCAGTTATCTCATCCTaGTATAGCGTGAAACAAGTT +
Preference number: 4 (lower is better)
Translates to: DLVSCVSSCSPAPNHSGRSVISS*YSVKQV
Trigger: AACTTGTTTCACGCTATATCAGGATGAGATAACTGA...CCTACCTGAATGGTTCGGTGCGGGAGAACAACTAGAGACACAGGAAACTAGGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636437.1
CDS-3UTR TCA 90 bp TCCAGGCGGCTTGAGTGGAAAAGTGAGTATTTCATCACCAGTGCGAGAGTCTTAGAAACAGCTTCTGAATaGAAGGTCTTTCAGTCGTTG +
Preference number: 4 (lower is better)
Translates to: SRRLEWKSEYFITSARVLETASE*KVFQSL
Trigger: CAACGACTGAAAGACCTTTCATTCAGAAGCTGTTTC...TAAGACTCTCGCACTGGTGATGAAATACTCACTTTTCCACTCAAGCCGCCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636335.1
CDS-3UTR TCA 90 bp CTTCAGTGGTCCGGTAAGTCTTTCATGTCACAGCTGAGGTTTAATGATGGCAGTGGACGAAACAGCTTCTaGATGAAAGGTCTTTCAGTC +
Preference number: 4 (lower is better)
Translates to: LQWSGKSFMSQLRFNDGSGRNSF*MKGLSV
Trigger: GACTGAAAGACCTTTCATTCAGAAGCTGTTTCGTCC...ACTGCCATCATTAAACCTCAGCTGTGACATGAAAGACTTACCGGACCACTGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR TCA 90 bp CATGTGATCTTCCTGATAGGGCTGTTGACACAGGCCTCTTGTGAAGATCCACATAAGGACAAACTTCTTTaGGGAGATCTCCTAGTGTGT +
Preference number: 4 (lower is better)
Translates to: HVIFLIGLLTQASCEDPHKDKLL*GDLLVC
Trigger: ACACACTAGGAGATCTCCTCAAAGAAGTTTGTCCTT...ATGTGGATCTTCACAAGAGGCCTGTGTCAACAGCCCTATCAGGAAGATCACATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636335.1
ENST00000636437.1
CDS-3UTR TCA 90 bp CTGGCTGCCAGGGACCACAGTGAAAAATTAGACCTGGAGCCAATGAAAAACACTATTGAAGCAAAAGGGTaGCATGCTCTGATAAATCCC +
Preference number: 4 (lower is better)
Translates to: LAARDHSEKLDLEPMKNTIEAKG*HALINP
Trigger: GGGATTTATCAGAGCATGTCACCCTTTTGCTTCAAT...AGTGTTTTTCATTGGCTCCAGGTCTAATTTTTCACTGTGGTCCCTGGCAGCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR TCA 90 bp TCAAATCTAGATCAGAAGTTCACTCAAGCCTACTGCAAAGGCCTGACACTGGTTTCCACCAAACCTGATTaGAGCAAAAGGGTGACATGC +
Preference number: 4 (lower is better)
Translates to: SNLDQKFTQAYCKGLTLVSTKPD*SKRVTC
Trigger: GCATGTCACCCTTTTGCTTCAATCAGGTTTGGTGGA...AACCAGTGTCAGGCCTTTGCAGTAGGCTTGAGTGAACTTCTGATCTAGATTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR GCA 90 bp GAGACAAAGGCTGTGTCATGTGATCTTCCTGATAGGGCTGTTGACACAGGCCTCAAAATGAGCTTCAATTaGATCCTTAGATGGACAGTG +
Preference number: 4 (lower is better)
Translates to: ETKAVSCDLPDRAVDTGLKMSFN*ILRWTV
Trigger: CACTGTCCATCTAAGGATGCAATTGAAGCTCATTTT...GAGGCCTGTGTCAACAGCCCTATCAGGAAGATCACATGACACAGCCTTTGTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636335.1
ENST00000636437.1
CDS-3UTR GCA 90 bp AGGCTGTGTCATGTGATCTTCCTGATAGGGCTGTTGACACAGGCCTCTTGTGAATCAAATCTGTCATTTTaGAATCCCATCCAGAGTTGC +
Preference number: 4 (lower is better)
Translates to: RLCHVIFLIGLLTQASCESNLSF*NPIQSC
Trigger: GCAACTCTGGATGGGATTGCAAAATGACAGATTTGA...TTCACAAGAGGCCTGTGTCAACAGCCCTATCAGGAAGATCACATGACACAGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636335.1
ENST00000636437.1
CDS-3UTR GCA 90 bp CTTCAGTGGTCCGGTAAGTCTTTCATGTCACAGCTGAGGTTTAATGATGGCAGTAGACAAGTAATCCTATaGCCTATATCCACCCCATGC +
Preference number: 4 (lower is better)
Translates to: LQWSGKSFMSQLRFNDGSRQVIL*PISTPC
Trigger: GCATGGGGTGGATATAGGGCATAGGATTACTTGTCT...ACTGCCATCATTAAACCTCAGCTGTGACATGAAAGACTTACCGGACCACTGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR GCA 90 bp GAAGACCTTCAGTGGTCCGGTAAGTCTTTCATGTCACAGCTGAGGTTTAATGATTTCACTCAAGCCTACTaGAAAGGCCTGACACTGGTT +
Preference number: 4 (lower is better)
Translates to: EDLQWSGKSFMSQLRFNDFTQAY*KGLTLV
Trigger: AACCAGTGTCAGGCCTTTGCAGTAGGCTTGAGTGAA...ATCATTAAACCTCAGCTGTGACATGAAAGACTTACCGGACCACTGAAGGTCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR GCA 90 bp TTTCATGAGCTAAAGTTCAACCATGGTCACCTTAGGAAATACCCCTGTTTATTTGGAGCTGAACCCTGCTaGACTTCCGCCCTCTGGTAT +
Preference number: 4 (lower is better)
Translates to: FHELKFNHGHLRKYPCLFGAEPC*TSALWY
Trigger: ATACCAGAGGGCGGAAGTGCAGCAGGGTTCAGCTCC...AAATAAACAGGGGTATTTCCTAAGGTGACCATGGTTGAACTTTAGCTCATGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR CCA 90 bp TTGAGGAGATCTCCTAGTGTGTGCAACTGTCCATCTGCAGCCACAGGACGAAACAGGTGTTTCCAACATTaGCTCAATTCCATGAATCAT +
Preference number: 4 (lower is better)
Translates to: LRRSPSVCNCPSAATGRNRCFQH*LNSMNH
Trigger: ATGATTCATGGAATTGAGCCAATGTTGGAAACACCT...GTTTCGTCCTGTGGCTGCAGATGGACAGTTGCACACACTAGGAGATCTCCTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369070.5
ENST00000613993.1
ENST00000646025.1
CDS-3UTR CCA 90 bp CTTCAGTGGTCCGGTAAGTCTTTCATGTCACAGCTGAGGTTTAATGATGGCAGTACAGAAGACCTTCAGTaGTCCGGTAAGTCTTTCATG +
Preference number: 4 (lower is better)
Translates to: LQWSGKSFMSQLRFNDGSTEDLQ*SGKSFM
Trigger: CATGAAAGACTTACCGGACCACTGAAGGTCTTCTGT...ACTGCCATCATTAAACCTCAGCTGTGACATGAAAGACTTACCGGACCACTGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR CCA 90 bp AGGCTGTGTCATGTGATCTTCCTGATAGGGCTGTTGACACAGGCCTCTTGTGAATTAATCTTCTCCTGGTaGGATCTCTTCAGGATCAAT +
Preference number: 4 (lower is better)
Translates to: RLCHVIFLIGLLTQASCELIFSW*DLFRIN
Trigger: ATTGATCCTGAAGAGATCCCACCAGGAGAAGATTAA...TTCACAAGAGGCCTGTGTCAACAGCCCTATCAGGAAGATCACATGACACAGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636335.1
CDS-3UTR CCA 90 bp CCATCTTCAGGATCAATAGCAGAAGGACAAACTTCTTTGAGGAGATCTCCTAGTTCTTCCTCACTAGCTTaGAACCTCTGGATTCCCACC +
Preference number: 4 (lower is better)
Translates to: PSSGSIAEGQTSLRRSPSSSSLA*NLWIPT
Trigger: GGTGGGAATCCAGAGGTTCCAAGCTAGTGAGGAAGA...ACTAGGAGATCTCCTCAAAGAAGTTTGTCCTTCTGCTATTGATCCTGAAGATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646025.1
CDS-3UTR TCA 90 bp ATGCAAAGTAAGACCAGCCCAGTTGCCTTATCTGACATGGAATCTTTTTCCTGTTCCACCAAACCTGATTaGAGCAAAAGGGTGACATGC +
Preference number: 4 (lower is better)
Translates to: MQSKTSPVALSDMESFSCSTKPD*SKRVTC
Trigger: GCATGTCACCCTTTTGCTTCAATCAGGTTTGGTGGA...ACAGGAAAAAGATTCCATGTCAGATAAGGCAACTGGGCTGGTCTTACTTTGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR TCA 90 bp ATGGGATCTAAAACCATGATCGTGTCTGATACTGTAAGCCTTTTAGCGTACTCATGCCTCCACCAAACCTaGTTGAAGCAAAAGGGTGAC +
Preference number: 4 (lower is better)
Translates to: MGSKTMIVSDTVSLLAYSCLHQT*LKQKGD
Trigger: GTCACCCTTTTGCTTCAATCAGGTTTGGTGGAGGCA...TGAGTACGCTAAAAGGCTTACAGTATCAGACACGATCATGGTTTTAGATCCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR TCA 90 bp TGGGTCAACATTCAATATGGACAGCCAGCTAGCTCACAAGAAATGAAATGTAATGGAGGAAAGCAGAGGTaGTGCAAAGTAAGACCAGCC +
Preference number: 4 (lower is better)
Translates to: WVNIQYGQPASSQEMKCNGGKQR*CKVRPA
Trigger: GGCTGGTCTTACTTTGCATCACCTCTGCTTTCCTCC...ATTACATTTCATTTCTTGTGAGCTAGCTGGCTGTCCATATTGAATGTTGACCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR TCA 90 bp GTTTCAGCTTCATTATATTTTACAGAAGACCTTCAGTGGTCCGGTAAGTCTTTCGGAGGAAAGCAGAGGTaGTGCAAAGTAAGACCAGCC +
Preference number: 4 (lower is better)
Translates to: VSASLYFTEDLQWSGKSFGGKQR*CKVRPA
Trigger: GGCTGGTCTTACTTTGCATCACCTCTGCTTTCCTCC...GAAAGACTTACCGGACCACTGAAGGTCTTCTGTAAAATATAATGAAGCTGAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR TCA 90 bp ATGGGATCTAAAACCATGATCGTGTCTGATACTGTAAGCCTTTTAGCGTACTCATCCACCCCATGCCAATaGCGACCAGTCAAAATGGTA +
Preference number: 4 (lower is better)
Translates to: MGSKTMIVSDTVSLLAYSSTPCQ*RPVKMV
Trigger: TACCATTTTGACTGGTCGTCATTGGCATGGGGTGGA...TGAGTACGCTAAAAGGCTTACAGTATCAGACACGATCATGGTTTTAGATCCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR GCA 90 bp AGCGAAGTGTTTCTGGTCAGGTTGCCTCCACCAAACCTGATTGAAGCAAAAGGGCAAATAGTATGGTTCTaGTTCCCTTTCAGTTATCTC +
Preference number: 4 (lower is better)
Translates to: SEVFLVRLPPPNLIEAKGQIVWF*FPFSYL
Trigger: GAGATAACTGAAAGGGAAGCAGAACCATACTATTTG...CCCTTTTGCTTCAATCAGGTTTGGTGGAGGCAACCTGACCAGAAACACTTCGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343245.7
ENST00000369076.8
ENST00000646025.1
CDS-3UTR GCA 90 bp TTTTCCCCATCTTCAGGATCAATAGCAGAAGGACAAACTTCTTTGAGGAGATCTAGATCTCCTAGTGTGTaGAACTGTCCATCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: FSPSSGSIAEGQTSLRRSRSPSV*NCPSAA
Trigger: GGCTGCAGATGGACAGTTGCACACACTAGGAGATCT...AGATCTCCTCAAAGAAGTTTGTCCTTCTGCTATTGATCCTGAAGATGGGGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360666.6
ENST00000369070.5
ENST00000613993.1
ENST00000646025.1
CDS-3UTR GCA 90 bp ATGGGATCTAAAACCATGATCGTGTCTGATACTGTAAGCCTTTTAGCGTACTCAAGATCTCCTAGTGTGTaGAACTGTCCATCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: MGSKTMIVSDTVSLLAYSRSPSV*NCPSAA
Trigger: GGCTGCAGATGGACAGTTGCACACACTAGGAGATCT...TGAGTACGCTAAAAGGCTTACAGTATCAGACACGATCATGGTTTTAGATCCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR GCA 90 bp TCAAATCTAGATCAGAAGTTCACTCAAGCCTACTGCAAAGGCCTGACACTGGTTTGTTCACTCAGCCACTaGAGAGGTGTTTCCAACATT +
Preference number: 4 (lower is better)
Translates to: SNLDQKFTQAYCKGLTLVCSLSH*RGVSNI
Trigger: AATGTTGGAAACACCTCTGCAGTGGCTGAGTGAACA...AACCAGTGTCAGGCCTTTGCAGTAGGCTTGAGTGAACTTCTGATCTAGATTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR GCA 90 bp TTCAAATCTAGATCAGAAGTTCACTCAAGCCTACTGCAAAGGCCTGACACTGGTAGACAAGTAATCCTATaGCCTATATCCACCCCATGC +
Preference number: 4 (lower is better)
Translates to: FKSRSEVHSSLLQRPDTGRQVIL*PISTPC
Trigger: GCATGGGGTGGATATAGGGCATAGGATTACTTGTCT...ACCAGTGTCAGGCCTTTGCAGTAGGCTTGAGTGAACTTCTGATCTAGATTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR GCA 90 bp TGGCAGTGGAGGAAAGCAGAGGTGATGCAAAGTAAGACCAGCCCAGTTGCCTTATTAAAGAAAAGGTACTaGAGTCAAGAGACAGGTAAT +
Preference number: 4 (lower is better)
Translates to: WQWRKAEVMQSKTSPVALLKKRY*SQETGN
Trigger: ATTACCTGTCTCTTGACTGCAGTACCTTTTCTTTAA...TAAGGCAACTGGGCTGGTCTTACTTTGCATCACCTCTGCTTTCCTCCACTGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR GCA 90 bp CCACTGCAGAGGTGTTTCCAACATTGGCTCAATTCCATGAATCATCACTTGATTTTCACTCAAGCCTACTaGAAAGGCCTGACACTGGTT +
Preference number: 4 (lower is better)
Translates to: PLQRCFQHWLNSMNHHLIFTQAY*KGLTLV
Trigger: AACCAGTGTCAGGCCTTTGCAGTAGGCTTGAGTGAA...AATCAAGTGATGATTCATGGAATTGAGCCAATGTTGGAAACACCTCTGCAGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360666.6
ENST00000369070.5
CDS-3UTR GCA 90 bp GAGACAAAGGCTGTGTCATGTGATCTTCCTGATAGGGCTGTTGACACAGGCCTCGCTAAACAAAACCAATaGCTATGTTCTAGAGAAATG +
Preference number: 4 (lower is better)
Translates to: ETKAVSCDLPDRAVDTGLAKQNQ*LCSREM
Trigger: CATTTCTCTAGAACATAGGCATTGGTTTTGTTTAGC...GAGGCCTGTGTCAACAGCCCTATCAGGAAGATCACATGACACAGCCTTTGTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636437.1
CDS-3UTR GCA 90 bp CTTTCAGAGGTCCCGAGGAAGTTTCCAGGCGGCTTGAGTGGAAAAGTGAGTATTGTATTTCATCACCAGTaGGAGAGTCTTAGTTATCAA +
Preference number: 4 (lower is better)
Translates to: LSEVPRKFPGGLSGKVSIVFHHQ*ESLSYQ
Trigger: TTGATAACTAAGACTCTCGCACTGGTGATGAAATAC...AATACTCACTTTTCCACTCAAGCCGCCTGGAAACTTCCTCGGGACCTCTGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636335.1
CDS-3UTR CCA 90 bp AGCGAAGTGTTTCTGGTCAGGTTGCCTCCACCAAACCTGATTGAAGCAAAAGGGAGGTGTTTCCAACATTaGCTCAATTCCATGAATCAT +
Preference number: 4 (lower is better)
Translates to: SEVFLVRLPPPNLIEAKGRCFQH*LNSMNH
Trigger: ATGATTCATGGAATTGAGCCAATGTTGGAAACACCT...CCCTTTTGCTTCAATCAGGTTTGGTGGAGGCAACCTGACCAGAAACACTTCGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR CCA 90 bp CTGGCTGCCAGGGACCACAGTGAAAAATTAGACCTGGAGCCAATGAAAAACACTGATCCTTCAATCTGTTaGCTGTGGGATGATACTAAT +
Preference number: 4 (lower is better)
Translates to: LAARDHSEKLDLEPMKNTDPSIC*LWDDTN
Trigger: ATTAGTATCATCCCACAGCCAACAGATTGAAGGATC...AGTGTTTTTCATTGGCTCCAGGTCTAATTTTTCACTGTGGTCCCTGGCAGCCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR CCA 90 bp AGGGTGACATGCTCTGATAAATCCCATTTAAGGATGATTCTGTTCAGGCAAATAGCAGCGAAGTGTTTCTaGTCAGGTTGCCTCCACCAA +
Preference number: 4 (lower is better)
Translates to: RVTCSDKSHLRMILFRQIAAKCF*SGCLHQ
Trigger: TTGGTGGAGGCAACCTGACCAGAAACACTTCGCTGC...TATTTGCCTGAACAGAATCATCCTTAAATGGGATTTATCAGAGCATGTCACCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR CCA 90 bp GCAGAGGTGTTTCCAACATTGGCTCAATTCCATGAATCATCACTTGATTCTTTTGCAGCGAAGTGTTTCTaGTCAGGTTGCCTCCACCAA +
Preference number: 4 (lower is better)
Translates to: AEVFPTLAQFHESSLDSFAAKCF*SGCLHQ
Trigger: TTGGTGGAGGCAACCTGACCAGAAACACTTCGCTGC...AAAAGAATCAAGTGATGATTCATGGAATTGAGCCAATGTTGGAAACACCTCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360666.6
ENST00000369070.5
ENST00000646025.1
CDS-3UTR CCA 90 bp CTGGCTGCCAGGGACCACAGTGAAAAATTAGACCTGGAGCCAATGAAAAACACTTTGCCTTATCTGACATaGAATCTTTTTCCTGTCTGG +
Preference number: 4 (lower is better)
Translates to: LAARDHSEKLDLEPMKNTLPYLT*NLFPVW
Trigger: CCAGACAGGAAAAAGATTCCATGTCAGATAAGGCAA...AGTGTTTTTCATTGGCTCCAGGTCTAATTTTTCACTGTGGTCCCTGGCAGCCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR CCA 90 bp AAAGCAGAGGTGATGCAAAGTAAGACCAGCCCAGTTGCCTTATCTGACATGGAAGCCAGCATGAATTTCTaGTTTTACTCTTCCTCTAGG +
Preference number: 4 (lower is better)
Translates to: KAEVMQSKTSPVALSDMEASMNF*FYSSSR
Trigger: CCTAGAGGAAGAGTAAAACCAGAAATTCATGCTGGC...TTCCATGTCAGATAAGGCAACTGGGCTGGTCTTACTTTGCATCACCTCTGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR CCA 90 bp ATGACAGCTTCTGAGACAAGTAATCCTATGCCCTATATCCACCCCATGCCAATGGCCAGCATGAATTTCTaGTTTTACTCTTCCTCTAGG +
Preference number: 4 (lower is better)
Translates to: MTASETSNPMPYIHPMPMASMNF*FYSSSR
Trigger: CCTAGAGGAAGAGTAAAACCAGAAATTCATGCTGGC...CATTGGCATGGGGTGGATATAGGGCATAGGATTACTTGTCTCAGAAGCTGTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR CCA 90 bp TCTGATAAATCCCATTTAAGGATGATTCTGTTCAGGCAAATAGTTGATCCTTCAACCTACTCCAAGCTATaGCTCCTCCTTCCGGCTCCC +
Preference number: 4 (lower is better)
Translates to: SDKSHLRMILFRQIVDPSTYSKL*LLLPAP
Trigger: GGGAGCCGGAAGGAGGAGCCATAGCTTGGAGTAGGT...TGAAGGATCAACTATTTGCCTGAACAGAATCATCCTTAAATGGGATTTATCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360666.6
ENST00000369070.5
ENST00000646025.1
CDS-3UTR CCA 90 bp TACCCCTGTTTATTTGTTAATCAGAAATACAAATCGAGTGGCACATACTTCCATACCTACTCCAAGCTATaGCTCCTCCTTCCGGCTCCC +
Preference number: 4 (lower is better)
Translates to: YPCLFVNQKYKSSGTYFHTYSKL*LLLPAP
Trigger: GGGAGCCGGAAGGAGGAGCCATAGCTTGGAGTAGGT...ATGGAAGTATGTGCCACTCGATTTGTATTTCTGATTAACAAATAAACAGGGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR CCA 90 bp AATACAAATCGAGTGGCACATACTTCCATTTTCTTCTTAGGCCAAAGGTTTCAGTGCACTTCCGCCCTCTaGTATCCAGCGAATACAACC +
Preference number: 4 (lower is better)
Translates to: NTNRVAHTSIFFLGQRFQCTSAL*YPANTT
Trigger: GGTTGTATTCGCTGGATACCAGAGGGCGGAAGTGCA...CTGAAACCTTTGGCCTAAGAAGAAAATGGAAGTATGTGCCACTCGATTTGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369070.5
ENST00000369076.8
ENST00000646025.1
CDS-3UTR CCA 90 bp GAGGTCCCGAGGAAGTTTCCAGGCGGCTTGAGTGGAAAAGTGAGTATTTCATCACGCCCTCATTTATTGTaGCTTATTCAAAACAGCATA +
Preference number: 4 (lower is better)
Translates to: EVPRKFPGGLSGKVSISSRPHLL*LIQNSI
Trigger: TATGCTGTTTTGAATAAGCCACAATAAATGAGGGCG...TGATGAAATACTCACTTTTCCACTCAAGCCGCCTGGAAACTTCCTCGGGACCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636437.1
3UTR CAA 72 bp CCATCTTCAGGATCAATAGCAGAAGGACAAACTTCTTaGAGGAGATCTCCTAGTGTGTGCAACTGTCCATCT +
Preference number: 4 (lower is better)
Translates to: PSSGSIAEGQTS*RRSPSVCNCPS
Trigger: AGATGGACAGTTGCACACACTAGGAGATCTCCTCAAAGAAGTTTGTCCTTCTGCTATTGATCCTGAAGATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369070.5
ENST00000613993.1
ENST00000646025.1
CDS-3UTR TCA 90 bp GAAGACCTTCAGTGGTCCGGTAAGTCTTTCATGTCACAGCTGAGGTTTAATGATCATCCTGATATAGCGTaGAACAAGTTGGAATTCGTC +
Preference number: 4 (lower is better)
Translates to: EDLQWSGKSFMSQLRFNDHPDIA*NKLEFV
Trigger: GACGAATTCCAACTTGTTTCACGCTATATCAGGATG...ATCATTAAACCTCAGCTGTGACATGAAAGACTTACCGGACCACTGAAGGTCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR TCA 90 bp CTGGCTGCCAGGGACCACAGTGAAAAATTAGACCTGGAGCCAATGAAAAACACTTCAGTTATCTCATCCTaGTATAGCGTGAAACAAGTT +
Preference number: 4 (lower is better)
Translates to: LAARDHSEKLDLEPMKNTSVISS*YSVKQV
Trigger: AACTTGTTTCACGCTATATCAGGATGAGATAACTGA...AGTGTTTTTCATTGGCTCCAGGTCTAATTTTTCACTGTGGTCCCTGGCAGCCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR TCA 90 bp CCACTGCAGAGGTGTTTCCAACATTGGCTCAATTCCATGAATCATCACTTGATTGGACGAAACAGCTTCTaGATGAAAGGTCTTTCAGTC +
Preference number: 4 (lower is better)
Translates to: PLQRCFQHWLNSMNHHLIGRNSF*MKGLSV
Trigger: GACTGAAAGACCTTTCATTCAGAAGCTGTTTCGTCC...AATCAAGTGATGATTCATGGAATTGAGCCAATGTTGGAAACACCTCTGCAGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360666.6
ENST00000369070.5
ENST00000613993.1
ENST00000646025.1
CDS-3UTR TCA 90 bp AGAAGAAGGAGGTGGTTGGTCTCCAAGGTGATCAAAGCAACTTGTCTTTCATTTGGACGAAACAGCTTCTaGATGAAAGGTCTTTCAGTC +
Preference number: 4 (lower is better)
Translates to: RRRRWLVSKVIKATCLSFGRNSF*MKGLSV
Trigger: GACTGAAAGACCTTTCATTCAGAAGCTGTTTCGTCC...AAATGAAAGACAAGTTGCTTTGATCACCTTGGAGACCAACCACCTCCTTCTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636437.1
CDS-3UTR TCA 90 bp GAAGACCTTCAGTGGTCCGGTAAGTCTTTCATGTCACAGCTGAGGTTTAATGATATTGAAGCAAAAGGGTaGCATGCTCTGATAAATCCC +
Preference number: 4 (lower is better)
Translates to: EDLQWSGKSFMSQLRFNDIEAKG*HALINP
Trigger: GGGATTTATCAGAGCATGTCACCCTTTTGCTTCAAT...ATCATTAAACCTCAGCTGTGACATGAAAGACTTACCGGACCACTGAAGGTCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR TCA 90 bp CAGAAATACAAATCGAGTGGCACATACTTCCATTTTCTTCTTAGGCCAAAGGTTTGCCTCCACCAAACCTaGTTGAAGCAAAAGGGTGAC +
Preference number: 4 (lower is better)
Translates to: QKYKSSGTYFHFLLRPKVCLHQT*LKQKGD
Trigger: GTCACCCTTTTGCTTCAATCAGGTTTGGTGGAGGCA...AACCTTTGGCCTAAGAAGAAAATGGAAGTATGTGCCACTCGATTTGTATTTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR TCA 90 bp GTTTCAGCTTCATTATATTTTACAGAAGACCTTCAGTGGTCCGGTAAGTCTTTCTCCACCCCATGCCAATaGCGACCAGTCAAAATGGTA +
Preference number: 4 (lower is better)
Translates to: VSASLYFTEDLQWSGKSFSTPCQ*RPVKMV
Trigger: TACCATTTTGACTGGTCGTCATTGGCATGGGGTGGA...GAAAGACTTACCGGACCACTGAAGGTCTTCTGTAAAATATAATGAAGCTGAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR TCA 90 bp ATGACAGCTTCTGAGACAAGTAATCCTATGCCCTATATCCACCCCATGCCAATGATGCTTAGGATACTATaGTTTGACAGGCTTACAGTG +
Preference number: 4 (lower is better)
Translates to: MTASETSNPMPYIHPMPMMLRIL*FDRLTV
Trigger: CACTGTAAGCCTGTCAAATCATAGTATCCTAAGCAT...CATTGGCATGGGGTGGATATAGGGCATAGGATTACTTGTCTCAGAAGCTGTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR TCA 90 bp TATTTTACAGAAGACCTTCAGTGGTCCGGTAAGTCTTTCATGTCACAGCTGAGGAACCATGATCGTGTCTaGTACTGTAAGCCTTTTAGC +
Preference number: 4 (lower is better)
Translates to: YFTEDLQWSGKSFMSQLRNHDRV*YCKPFS
Trigger: GCTAAAAGGCTTACAGTATCAGACACGATCATGGTT...CCTCAGCTGTGACATGAAAGACTTACCGGACCACTGAAGGTCTTCTGTAAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR TCA 90 bp ATGGGATCTAAAACCATGATCGTGTCTGATACTGTAAGCCTTTTAGCGTACTCACCTACTGCAAAGGCCTaGCACTGGTTTTGTCTGTAT +
Preference number: 4 (lower is better)
Translates to: MGSKTMIVSDTVSLLAYSPTAKA*HWFCLY
Trigger: ATACAGACAAAACCAGTGTCAGGCCTTTGCAGTAGG...TGAGTACGCTAAAAGGCTTACAGTATCAGACACGATCATGGTTTTAGATCCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR GCA 90 bp CTTCAGTGGTCCGGTAAGTCTTTCATGTCACAGCTGAGGTTTAATGATGGCAGTTCAAATCTGTCATTTTaGAATCCCATCCAGAGTTGC +
Preference number: 4 (lower is better)
Translates to: LQWSGKSFMSQLRFNDGSSNLSF*NPIQSC
Trigger: GCAACTCTGGATGGGATTGCAAAATGACAGATTTGA...ACTGCCATCATTAAACCTCAGCTGTGACATGAAAGACTTACCGGACCACTGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR GCA 90 bp AAAGCAGAGGTGATGCAAAGTAAGACCAGCCCAGTTGCCTTATCTGACATGGAATCAAATCTGTCATTTTaGAATCCCATCCAGAGTTGC +
Preference number: 4 (lower is better)
Translates to: KAEVMQSKTSPVALSDMESNLSF*NPIQSC
Trigger: GCAACTCTGGATGGGATTGCAAAATGACAGATTTGA...TTCCATGTCAGATAAGGCAACTGGGCTGGTCTTACTTTGCATCACCTCTGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR GCA 90 bp AGGGTGACATGCTCTGATAAATCCCATTTAAGGATGATTCTGTTCAGGCAAATAAGATCTCCTAGTGTGTaGAACTGTCCATCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: RVTCSDKSHLRMILFRQIRSPSV*NCPSAA
Trigger: GGCTGCAGATGGACAGTTGCACACACTAGGAGATCT...TATTTGCCTGAACAGAATCATCCTTAAATGGGATTTATCAGAGCATGTCACCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR GCA 90 bp CATAGACATTTATCTTCTTCGCCTATGGTGAGGAAAAGATGTCCTTCATACTTCAGATCTCCTAGTGTGTaGAACTGTCCATCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: HRHLSSSPMVRKRCPSYFRSPSV*NCPSAA
Trigger: GGCTGCAGATGGACAGTTGCACACACTAGGAGATCT...GAAGTATGAAGGACATCTTTTCCTCACCATAGGCGAAGAAGATAAATGTCTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636335.1
CDS-3UTR GCA 90 bp GTTTCAGCTTCATTATATTTTACAGAAGACCTTCAGTGGTCCGGTAAGTCTTTCAGATCTCCTAGTGTGTaGAACTGTCCATCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: VSASLYFTEDLQWSGKSFRSPSV*NCPSAA
Trigger: GGCTGCAGATGGACAGTTGCACACACTAGGAGATCT...GAAAGACTTACCGGACCACTGAAGGTCTTCTGTAAAATATAATGAAGCTGAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR GCA 90 bp TCTTCAGGATCAATAGCAGAAGGACAAACTTCTTTGAGGAGATCTCCTAGTGTGTGTTCACTCAGCCACTaGAGAGGTGTTTCCAACATT +
Preference number: 4 (lower is better)
Translates to: SSGSIAEGQTSLRRSPSVCSLSH*RGVSNI
Trigger: AATGTTGGAAACACCTCTGCAGTGGCTGAGTGAACA...CACACTAGGAGATCTCCTCAAAGAAGTTTGTCCTTCTGCTATTGATCCTGAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369070.5
ENST00000613993.1
ENST00000646025.1
CDS-3UTR GCA 90 bp TTTTCCCCATCTTCAGGATCAATAGCAGAAGGACAAACTTCTTTGAGGAGATCTTTCACTCAAGCCTACTaGAAAGGCCTGACACTGGTT +
Preference number: 4 (lower is better)
Translates to: FSPSSGSIAEGQTSLRRSFTQAY*KGLTLV
Trigger: AACCAGTGTCAGGCCTTTGCAGTAGGCTTGAGTGAA...AGATCTCCTCAAAGAAGTTTGTCCTTCTGCTATTGATCCTGAAGATGGGGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360666.6
ENST00000369070.5
CDS-3UTR GCA 90 bp CTTCAGTGGTCCGGTAAGTCTTTCATGTCACAGCTGAGGTTTAATGATGGCAGTTGCATAGTATGGTTCTaGTTCCCTTTCAGTTATCTC +
Preference number: 4 (lower is better)
Translates to: LQWSGKSFMSQLRFNDGSCIVWF*FPFSYL
Trigger: GAGATAACTGAAAGGGAAGCAGAACCATACTATGCA...ACTGCCATCATTAAACCTCAGCTGTGACATGAAAGACTTACCGGACCACTGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369070.5
ENST00000635758.2
CDS-3UTR GCA 90 bp ATGACAGCTTCTGAGACAAGTAATCCTATGCCCTATATCCACCCCATGCCAATGTGCATAGTATGGTTCTaGTTCCCTTTCAGTTATCTC +
Preference number: 4 (lower is better)
Translates to: MTASETSNPMPYIHPMPMCIVWF*FPFSYL
Trigger: GAGATAACTGAAAGGGAAGCAGAACCATACTATGCA...CATTGGCATGGGGTGGATATAGGGCATAGGATTACTTGTCTCAGAAGCTGTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369070.5
ENST00000635758.2
CDS-3UTR GCA 90 bp GTTTCAGCTTCATTATATTTTACAGAAGACCTTCAGTGGTCCGGTAAGTCTTTCACTGCGTCCACTGTTTaGGAGCTTTTCCAGAACGCT +
Preference number: 4 (lower is better)
Translates to: VSASLYFTEDLQWSGKSFTASTV*ELFQNA
Trigger: AGCGTTCTGGAAAAGCTCGCAAACAGTGGACGCAGT...GAAAGACTTACCGGACCACTGAAGGTCTTCTGTAAAATATAATGAAGCTGAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646025.1
CDS-3UTR CCA 90 bp CTTCAGTGGTCCGGTAAGTCTTTCATGTCACAGCTGAGGTTTAATGATGGCAGTTTGATGGCCCAAAACTaGTCAAATCTGTCATTTTGC +
Preference number: 4 (lower is better)
Translates to: LQWSGKSFMSQLRFNDGSLMAQN*SNLSFC
Trigger: GCAAAATGACAGATTTGACCAGTTTTGGGCCATCAA...ACTGCCATCATTAAACCTCAGCTGTGACATGAAAGACTTACCGGACCACTGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR CCA 90 bp CTTCAGTGGTCCGGTAAGTCTTTCATGTCACAGCTGAGGTTTAATGATGGCAGTTTGCCTTATCTGACATaGAATCTTTTTCCTGTCTGG +
Preference number: 4 (lower is better)
Translates to: LQWSGKSFMSQLRFNDGSLPYLT*NLFPVW
Trigger: CCAGACAGGAAAAAGATTCCATGTCAGATAAGGCAA...ACTGCCATCATTAAACCTCAGCTGTGACATGAAAGACTTACCGGACCACTGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR CCA 90 bp ATGCAAAGTAAGACCAGCCCAGTTGCCTTATCTGACATGGAATCTTTTTCCTGTACAGAAGACCTTCAGTaGTCCGGTAAGTCTTTCATG +
Preference number: 4 (lower is better)
Translates to: MQSKTSPVALSDMESFSCTEDLQ*SGKSFM
Trigger: CATGAAAGACTTACCGGACCACTGAAGGTCTTCTGT...ACAGGAAAAAGATTCCATGTCAGATAAGGCAACTGGGCTGGTCTTACTTTGCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR CCA 90 bp TCAAATCTAGATCAGAAGTTCACTCAAGCCTACTGCAAAGGCCTGACACTGGTTGCCAGCATGAATTTCTaGTTTTACTCTTCCTCTAGG +
Preference number: 4 (lower is better)
Translates to: SNLDQKFTQAYCKGLTLVASMNF*FYSSSR
Trigger: CCTAGAGGAAGAGTAAAACCAGAAATTCATGCTGGC...AACCAGTGTCAGGCCTTTGCAGTAGGCTTGAGTGAACTTCTGATCTAGATTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR CCA 90 bp TATTTTACAGAAGACCTTCAGTGGTCCGGTAAGTCTTTCATGTCACAGCTGAGGGCCAGCATGAATTTCTaGTTTTACTCTTCCTCTAGG +
Preference number: 4 (lower is better)
Translates to: YFTEDLQWSGKSFMSQLRASMNF*FYSSSR
Trigger: CCTAGAGGAAGAGTAAAACCAGAAATTCATGCTGGC...CCTCAGCTGTGACATGAAAGACTTACCGGACCACTGAAGGTCTTCTGTAAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR TCA 90 bp CCATCTTCAGGATCAATAGCAGAAGGACAAACTTCTTTGAGGAGATCTCCTAGTCATCCTGATATAGCGTaGAACAAGTTGGAATTCGTC +
Preference number: 4 (lower is better)
Translates to: PSSGSIAEGQTSLRRSPSHPDIA*NKLEFV
Trigger: GACGAATTCCAACTTGTTTCACGCTATATCAGGATG...ACTAGGAGATCTCCTCAAAGAAGTTTGTCCTTCTGCTATTGATCCTGAAGATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369070.5
ENST00000613993.1
ENST00000646025.1
CDS-3UTR TCA 90 bp TCTTCAGGATCAATAGCAGAAGGACAAACTTCTTTGAGGAGATCTCCTAGTGTGGAAACAGCTTCTGAATaGAAGGTCTTTCAGTCGTTG +
Preference number: 4 (lower is better)
Translates to: SSGSIAEGQTSLRRSPSVETASE*KVFQSL
Trigger: CAACGACTGAAAGACCTTTCATTCAGAAGCTGTTTC...CACACTAGGAGATCTCCTCAAAGAAGTTTGTCCTTCTGCTATTGATCCTGAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369070.5
ENST00000613993.1
ENST00000646025.1
CDS-3UTR TCA 90 bp AGAAGAAGGAGGTGGTTGGTCTCCAAGGTGATCAAAGCAACTTGTCTTTCATTTGAAACAGCTTCTGAATaGAAGGTCTTTCAGTCGTTG +
Preference number: 4 (lower is better)
Translates to: RRRRWLVSKVIKATCLSFETASE*KVFQSL
Trigger: CAACGACTGAAAGACCTTTCATTCAGAAGCTGTTTC...AAATGAAAGACAAGTTGCTTTGATCACCTTGGAGACCAACCACCTCCTTCTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636437.1
CDS-3UTR TCA 90 bp ATGGGATCTAAAACCATGATCGTGTCTGATACTGTAAGCCTTTTAGCGTACTCAGGACGAAACAGCTTCTaGATGAAAGGTCTTTCAGTC +
Preference number: 4 (lower is better)
Translates to: MGSKTMIVSDTVSLLAYSGRNSF*MKGLSV
Trigger: GACTGAAAGACCTTTCATTCAGAAGCTGTTTCGTCC...TGAGTACGCTAAAAGGCTTACAGTATCAGACACGATCATGGTTTTAGATCCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR TCA 90 bp CAGAAATACAAATCGAGTGGCACATACTTCCATTTTCTTCTTAGGCCAAAGGTTTCCACCAAACCTGATTaGAGCAAAAGGGTGACATGC +
Preference number: 4 (lower is better)
Translates to: QKYKSSGTYFHFLLRPKVSTKPD*SKRVTC
Trigger: GCATGTCACCCTTTTGCTTCAATCAGGTTTGGTGGA...AACCTTTGGCCTAAGAAGAAAATGGAAGTATGTGCCACTCGATTTGTATTTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR TCA 90 bp TCTGATAAATCCCATTTAAGGATGATTCTGTTCAGGCAAATAGTTGATCCTTCAGGAGGAAAGCAGAGGTaGTGCAAAGTAAGACCAGCC +
Preference number: 4 (lower is better)
Translates to: SDKSHLRMILFRQIVDPSGGKQR*CKVRPA
Trigger: GGCTGGTCTTACTTTGCATCACCTCTGCTTTCCTCC...TGAAGGATCAACTATTTGCCTGAACAGAATCATCCTTAAATGGGATTTATCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360666.6
ENST00000369070.5
ENST00000646025.1
CDS-3UTR TCA 90 bp CTTCAGTGGTCCGGTAAGTCTTTCATGTCACAGCTGAGGTTTAATGATGGCAGTGTGATCTACTGTATGTaGGTCAGAAAGTACTTGAAA +
Preference number: 4 (lower is better)
Translates to: LQWSGKSFMSQLRFNDGSVIYCM*VRKYLK
Trigger: TTTCAAGTACTTTCTGACTCACATACAGTAGATCAC...ACTGCCATCATTAAACCTCAGCTGTGACATGAAAGACTTACCGGACCACTGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR TCA 90 bp GTGACATGCTCTGATAAATCCCATTTAAGGATGATTCTGTTCAGGCAAATAGTTTCCACCCCATGCCAATaGCGACCAGTCAAAATGGTA +
Preference number: 4 (lower is better)
Translates to: VTCSDKSHLRMILFRQIVSTPCQ*RPVKMV
Trigger: TACCATTTTGACTGGTCGTCATTGGCATGGGGTGGA...AACTATTTGCCTGAACAGAATCATCCTTAAATGGGATTTATCAGAGCATGTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR TCA 90 bp AAAGTAAGACCAGCCCAGTTGCCTTATCTGACATGGAATCTTTTTCCTGTCTGGATGCTTAGGATACTATaGTTTGACAGGCTTACAGTG +
Preference number: 4 (lower is better)
Translates to: KVRPAQLPYLTWNLFPVWMLRIL*FDRLTV
Trigger: CACTGTAAGCCTGTCAAATCATAGTATCCTAAGCAT...CCAGACAGGAAAAAGATTCCATGTCAGATAAGGCAACTGGGCTGGTCTTACTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR TCA 90 bp TATTTTACAGAAGACCTTCAGTGGTCCGGTAAGTCTTTCATGTCACAGCTGAGGATGCACAAATATGTTTaGCTGGTAAAATCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: YFTEDLQWSGKSFMSQLRMHKYV*LVKSQR
Trigger: CCTCTGGGATTTTACCAGTCAAACATATTTGTGCAT...CCTCAGCTGTGACATGAAAGACTTACCGGACCACTGAAGGTCTTCTGTAAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR TCA 90 bp CCACTGCAGAGGTGTTTCCAACATTGGCTCAATTCCATGAATCATCACTTGATTAACCATGATCGTGTCTaGTACTGTAAGCCTTTTAGC +
Preference number: 4 (lower is better)
Translates to: PLQRCFQHWLNSMNHHLINHDRV*YCKPFS
Trigger: GCTAAAAGGCTTACAGTATCAGACACGATCATGGTT...AATCAAGTGATGATTCATGGAATTGAGCCAATGTTGGAAACACCTCTGCAGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360666.6
ENST00000369070.5
CDS-3UTR TCA 90 bp TCAAATCTAGATCAGAAGTTCACTCAAGCCTACTGCAAAGGCCTGACACTGGTTTTGCTTCTAAGTTTCTaGGATTGTATGCTGTACTGG +
Preference number: 4 (lower is better)
Translates to: SNLDQKFTQAYCKGLTLVLLLSF*DCMLYW
Trigger: CCAGTACAGCATACAATCTCAGAAACTTAGAAGCAA...AACCAGTGTCAGGCCTTTGCAGTAGGCTTGAGTGAACTTCTGATCTAGATTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR TCA 90 bp TCCCATTTAAGGATGATTCTGTTCAGGCAAATAGTTGATCCTTCAATCTGTTGGCCTACTGCAAAGGCCTaGCACTGGTTTTGTCTGTAT +
Preference number: 4 (lower is better)
Translates to: SHLRMILFRQIVDPSICWPTAKA*HWFCLY
Trigger: ATACAGACAAAACCAGTGTCAGGCCTTTGCAGTAGG...CCAACAGATTGAAGGATCAACTATTTGCCTGAACAGAATCATCCTTAAATGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360666.6
ENST00000369070.5
CDS-3UTR TCA 90 bp AGGGTGACATGCTCTGATAAATCCCATTTAAGGATGATTCTGTTCAGGCAAATACCTACTGCAAAGGCCTaGCACTGGTTTTGTCTGTAT +
Preference number: 4 (lower is better)
Translates to: RVTCSDKSHLRMILFRQIPTAKA*HWFCLY
Trigger: ATACAGACAAAACCAGTGTCAGGCCTTTGCAGTAGG...TATTTGCCTGAACAGAATCATCCTTAAATGGGATTTATCAGAGCATGTCACCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR TCA 90 bp CCATCTTCAGGATCAATAGCAGAAGGACAAACTTCTTTGAGGAGATCTCCTAGTCACACTGCTGTGACCTaGTATATTCTAAAGGGGATA +
Preference number: 4 (lower is better)
Translates to: PSSGSIAEGQTSLRRSPSHTAVT*YILKGI
Trigger: TATCCCCTTTAGAATATATCAGGTCACAGCAGTGTG...ACTAGGAGATCTCCTCAAAGAAGTTTGTCCTTCTGCTATTGATCCTGAAGATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646025.1
CDS-3UTR GCA 90 bp CTTCAGTGGTCCGGTAAGTCTTTCATGTCACAGCTGAGGTTTAATGATGGCAGTAAAATGAGCTTCAATTaGATCCTTAGATGGACAGTG +
Preference number: 4 (lower is better)
Translates to: LQWSGKSFMSQLRFNDGSKMSFN*ILRWTV
Trigger: CACTGTCCATCTAAGGATGCAATTGAAGCTCATTTT...ACTGCCATCATTAAACCTCAGCTGTGACATGAAAGACTTACCGGACCACTGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR GCA 90 bp AGGCGGCTTGAGTGGAAAAGTGAGTATTTCATCACCAGTGCGAGAGTCTTAGTTAAAATGAGCTTCAATTaGATCCTTAGATGGACAGTG +
Preference number: 4 (lower is better)
Translates to: RRLEWKSEYFITSARVLVKMSFN*ILRWTV
Trigger: CACTGTCCATCTAAGGATGCAATTGAAGCTCATTTT...AACTAAGACTCTCGCACTGGTGATGAAATACTCACTTTTCCACTCAAGCCGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636335.1
CDS-3UTR GCA 90 bp TTCAAATCTAGATCAGAAGTTCACTCAAGCCTACTGCAAAGGCCTGACACTGGTTCAAATCTGTCATTTTaGAATCCCATCCAGAGTTGC +
Preference number: 4 (lower is better)
Translates to: FKSRSEVHSSLLQRPDTGSNLSF*NPIQSC
Trigger: GCAACTCTGGATGGGATTGCAAAATGACAGATTTGA...ACCAGTGTCAGGCCTTTGCAGTAGGCTTGAGTGAACTTCTGATCTAGATTTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343245.7
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR GCA 90 bp GTGACATGCTCTGATAAATCCCATTTAAGGATGATTCTGTTCAGGCAAATAGTTAGATCTCCTAGTGTGTaGAACTGTCCATCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: VTCSDKSHLRMILFRQIVRSPSV*NCPSAA
Trigger: GGCTGCAGATGGACAGTTGCACACACTAGGAGATCT...AACTATTTGCCTGAACAGAATCATCCTTAAATGGGATTTATCAGAGCATGTCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR GCA 90 bp CTGGCTGCCAGGGACCACAGTGAAAAATTAGACCTGGAGCCAATGAAAAACACTGGCTTGGTAATAAAGTaGAGCAAACTTTCCTTATAT +
Preference number: 4 (lower is better)
Translates to: LAARDHSEKLDLEPMKNTGLVIK*SKLSLY
Trigger: ATATAAGGAAAGTTTGCTGCACTTTATTACCAAGCC...AGTGTTTTTCATTGGCTCCAGGTCTAATTTTTCACTGTGGTCCCTGGCAGCCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR GCA 90 bp GCTTCATTATATTTTACAGAAGACCTTCAGTGGTCCGGTAAGTCTTTCATGTCATTCACTCAAGCCTACTaGAAAGGCCTGACACTGGTT +
Preference number: 4 (lower is better)
Translates to: ASLYFTEDLQWSGKSFMSFTQAY*KGLTLV
Trigger: AACCAGTGTCAGGCCTTTGCAGTAGGCTTGAGTGAA...TGACATGAAAGACTTACCGGACCACTGAAGGTCTTCTGTAAAATATAATGAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR CCA 90 bp TCAGGATCAATAGCAGAAGGACAAACTTCTTTGAGGAGATCTCCTAGTGTGTGCGATCCTTCAATCTGTTaGCTGTGGGATGATACTAAT +
Preference number: 4 (lower is better)
Translates to: SGSIAEGQTSLRRSPSVCDPSIC*LWDDTN
Trigger: ATTAGTATCATCCCACAGCCAACAGATTGAAGGATC...GCACACACTAGGAGATCTCCTCAAAGAAGTTTGTCCTTCTGCTATTGATCCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369070.5
ENST00000646025.1
CDS-3UTR CCA 90 bp TTCAAATCTAGATCAGAAGTTCACTCAAGCCTACTGCAAAGGCCTGACACTGGTGATCCTTCAATCTGTTaGCTGTGGGATGATACTAAT +
Preference number: 4 (lower is better)
Translates to: FKSRSEVHSSLLQRPDTGDPSIC*LWDDTN
Trigger: ATTAGTATCATCCCACAGCCAACAGATTGAAGGATC...ACCAGTGTCAGGCCTTTGCAGTAGGCTTGAGTGAACTTCTGATCTAGATTTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR CCA 90 bp GAAGACCTTCAGTGGTCCGGTAAGTCTTTCATGTCACAGCTGAGGTTTAATGATGATCCTTCAATCTGTTaGCTGTGGGATGATACTAAT +
Preference number: 4 (lower is better)
Translates to: EDLQWSGKSFMSQLRFNDDPSIC*LWDDTN
Trigger: ATTAGTATCATCCCACAGCCAACAGATTGAAGGATC...ATCATTAAACCTCAGCTGTGACATGAAAGACTTACCGGACCACTGAAGGTCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR CCA 90 bp CTGGCTGCCAGGGACCACAGTGAAAAATTAGACCTGGAGCCAATGAAAAACACTGAAATACAAATCGAGTaGCACATACTTCCATTTTCT +
Preference number: 4 (lower is better)
Translates to: LAARDHSEKLDLEPMKNTEIQIE*HILPFS
Trigger: AGAAAATGGAAGTATGTGCCACTCGATTTGTATTTC...AGTGTTTTTCATTGGCTCCAGGTCTAATTTTTCACTGTGGTCCCTGGCAGCCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR CCA 90 bp CTGGCTGCCAGGGACCACAGTGAAAAATTAGACCTGGAGCCAATGAAAAACACTTTTAGCGTACTCAAATaGGTCAACATTCAATATGGA +
Preference number: 4 (lower is better)
Translates to: LAARDHSEKLDLEPMKNTFSVLK*VNIQYG
Trigger: TCCATATTGAATGTTGACCCATTTGAGTACGCTAAA...AGTGTTTTTCATTGGCTCCAGGTCTAATTTTTCACTGTGGTCCCTGGCAGCCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR CCA 90 bp TACCCCTGTTTATTTGTTAATCAGAAATACAAATCGAGTGGCACATACTTCCATTGCACTTCCGCCCTCTaGTATCCAGCGAATACAACC +
Preference number: 4 (lower is better)
Translates to: YPCLFVNQKYKSSGTYFHCTSAL*YPANTT
Trigger: GGTTGTATTCGCTGGATACCAGAGGGCGGAAGTGCA...ATGGAAGTATGTGCCACTCGATTTGTATTTCTGATTAACAAATAAACAGGGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369070.5
ENST00000369076.8
ENST00000646025.1
CDS-3UTR CCA 90 bp AGAAGAAGGAGGTGGTTGGTCTCCAAGGTGATCAAAGCAACTTGTCTTTCATTTATACACTGTCACACTTaGCGCCTCCAAATATCTGAT +
Preference number: 4 (lower is better)
Translates to: RRRRWLVSKVIKATCLSFIHCHT*RLQISD
Trigger: ATCAGATATTTGGAGGCGCCAAGTGTGACAGTGTAT...AAATGAAAGACAAGTTGCTTTGATCACCTTGGAGACCAACCACCTCCTTCTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636437.1
CDS-3UTR CCA 90 bp AATACAAATCGAGTGGCACATACTTCCATTTTCTTCTTAGGCCAAAGGTTTCAGTCAGTCGTTGTATTGTaGACTCACTGCGTCCACTGT +
Preference number: 4 (lower is better)
Translates to: NTNRVAHTSIFFLGQRFQSVVVL*THCVHC
Trigger: ACAGTGGACGCAGTGAGTCCACAATACAACGACTGA...CTGAAACCTTTGGCCTAAGAAGAAAATGGAAGTATGTGCCACTCGATTTGTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646025.1
CDS-3UTR TCA 90 bp GATACTGTAAGCCTTTTAGCGTACTCAAATGGGTCAACATTCAATATGGACAGCCATCCTGATATAGCGTaGAACAAGTTGGAATTCGTC +
Preference number: 4 (lower is better)
Translates to: DTVSLLAYSNGSTFNMDSHPDIA*NKLEFV
Trigger: GACGAATTCCAACTTGTTTCACGCTATATCAGGATG...GCTGTCCATATTGAATGTTGACCCATTTGAGTACGCTAAAAGGCTTACAGTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR TCA 90 bp TCAAATCTAGATCAGAAGTTCACTCAAGCCTACTGCAAAGGCCTGACACTGGTTTCAGTTATCTCATCCTaGTATAGCGTGAAACAAGTT +
Preference number: 4 (lower is better)
Translates to: SNLDQKFTQAYCKGLTLVSVISS*YSVKQV
Trigger: AACTTGTTTCACGCTATATCAGGATGAGATAACTGA...AACCAGTGTCAGGCCTTTGCAGTAGGCTTGAGTGAACTTCTGATCTAGATTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR TCA 90 bp GAAGACCTTCAGTGGTCCGGTAAGTCTTTCATGTCACAGCTGAGGTTTAATGATTCAGTTATCTCATCCTaGTATAGCGTGAAACAAGTT +
Preference number: 4 (lower is better)
Translates to: EDLQWSGKSFMSQLRFNDSVISS*YSVKQV
Trigger: AACTTGTTTCACGCTATATCAGGATGAGATAACTGA...ATCATTAAACCTCAGCTGTGACATGAAAGACTTACCGGACCACTGAAGGTCTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR TCA 90 bp GGATCAATAGCAGAAGGACAAACTTCTTTGAGGAGATCTCCTAGTGTGTGCAACTCAGTTATCTCATCCTaGTATAGCGTGAAACAAGTT +
Preference number: 4 (lower is better)
Translates to: GSIAEGQTSLRRSPSVCNSVISS*YSVKQV
Trigger: AACTTGTTTCACGCTATATCAGGATGAGATAACTGA...GTTGCACACACTAGGAGATCTCCTCAAAGAAGTTTGTCCTTCTGCTATTGATCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369070.5
ENST00000613993.1
ENST00000646025.1
CDS-3UTR TCA 90 bp TTTTCCCCATCTTCAGGATCAATAGCAGAAGGACAAACTTCTTTGAGGAGATCTGAAACAGCTTCTGAATaGAAGGTCTTTCAGTCGTTG +
Preference number: 4 (lower is better)
Translates to: FSPSSGSIAEGQTSLRRSETASE*KVFQSL
Trigger: CAACGACTGAAAGACCTTTCATTCAGAAGCTGTTTC...AGATCTCCTCAAAGAAGTTTGTCCTTCTGCTATTGATCCTGAAGATGGGGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360666.6
ENST00000369070.5
ENST00000613993.1
ENST00000646025.1
CDS-3UTR TCA 90 bp ATGGGATCTAAAACCATGATCGTGTCTGATACTGTAAGCCTTTTAGCGTACTCAGAAACAGCTTCTGAATaGAAGGTCTTTCAGTCGTTG +
Preference number: 4 (lower is better)
Translates to: MGSKTMIVSDTVSLLAYSETASE*KVFQSL
Trigger: CAACGACTGAAAGACCTTTCATTCAGAAGCTGTTTC...TGAGTACGCTAAAAGGCTTACAGTATCAGACACGATCATGGTTTTAGATCCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR TCA 90 bp AGGGTGACATGCTCTGATAAATCCCATTTAAGGATGATTCTGTTCAGGCAAATAGGACGAAACAGCTTCTaGATGAAAGGTCTTTCAGTC +
Preference number: 4 (lower is better)
Translates to: RVTCSDKSHLRMILFRQIGRNSF*MKGLSV
Trigger: GACTGAAAGACCTTTCATTCAGAAGCTGTTTCGTCC...TATTTGCCTGAACAGAATCATCCTTAAATGGGATTTATCAGAGCATGTCACCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR TCA 90 bp ATCTCTCACTGTTCATTATCAAAGTTACAAGATTGCATACCAATAGACAGACTGTGCCTCCACCAAACCTaGTTGAAGCAAAAGGGTGAC +
Preference number: 4 (lower is better)
Translates to: ISHCSLSKLQDCIPIDRLCLHQT*LKQKGD
Trigger: GTCACCCTTTTGCTTCAATCAGGTTTGGTGGAGGCA...CAGTCTGTCTATTGGTATGCAATCTTGTAACTTTGATAATGAACAGTGAGAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR TCA 90 bp TCTTCAGGATCAATAGCAGAAGGACAAACTTCTTTGAGGAGATCTCCTAGTGTGATGTTTCCACTTTCATaGGCTAAAGTTCAACCATGG +
Preference number: 4 (lower is better)
Translates to: SSGSIAEGQTSLRRSPSVMFPLS*AKVQPW
Trigger: CCATGGTTGAACTTTAGCTCATGAAAGTGGAAACAT...CACACTAGGAGATCTCCTCAAAGAAGTTTGTCCTTCTGCTATTGATCCTGAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369070.5
ENST00000646025.1
CDS-3UTR TCA 90 bp TTCAAATCTAGATCAGAAGTTCACTCAAGCCTACTGCAAAGGCCTGACACTGGTGTGATCTACTGTATGTaGGTCAGAAAGTACTTGAAA +
Preference number: 4 (lower is better)
Translates to: FKSRSEVHSSLLQRPDTGVIYCM*VRKYLK
Trigger: TTTCAAGTACTTTCTGACTCACATACAGTAGATCAC...ACCAGTGTCAGGCCTTTGCAGTAGGCTTGAGTGAACTTCTGATCTAGATTTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR TCA 90 bp ATGCAAAGTAAGACCAGCCCAGTTGCCTTATCTGACATGGAATCTTTTTCCTGTATGCTTAGGATACTATaGTTTGACAGGCTTACAGTG +
Preference number: 4 (lower is better)
Translates to: MQSKTSPVALSDMESFSCMLRIL*FDRLTV
Trigger: CACTGTAAGCCTGTCAAATCATAGTATCCTAAGCAT...ACAGGAAAAAGATTCCATGTCAGATAAGGCAACTGGGCTGGTCTTACTTTGCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR TCA 90 bp AAATCTAGATCAGAAGTTCACTCAAGCCTACTGCAAAGGCCTGACACTGGTTTTATGCACAAATATGTTTaGCTGGTAAAATCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: KSRSEVHSSLLQRPDTGFMHKYV*LVKSQR
Trigger: CCTCTGGGATTTTACCAGTCAAACATATTTGTGCAT...AAAACCAGTGTCAGGCCTTTGCAGTAGGCTTGAGTGAACTTCTGATCTAGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR TCA 90 bp CATAGACATTTATCTTCTTCGCCTATGGTGAGGAAAAGATGTCCTTCATACTTCCTTCTTCGCCTATGGTaGGGAAAAGATGTCCTTCAT +
Preference number: 4 (lower is better)
Translates to: HRHLSSSPMVRKRCPSYFLLRLW*GKDVLH
Trigger: ATGAAGGACATCTTTTCCTCACCATAGGCGAAGAAG...GAAGTATGAAGGACATCTTTTCCTCACCATAGGCGAAGAAGATAAATGTCTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636335.1
CDS-3UTR GCA 90 bp GAAGACCTTCAGTGGTCCGGTAAGTCTTTCATGTCACAGCTGAGGTTTAATGATAAAATGAGCTTCAATTaGATCCTTAGATGGACAGTG +
Preference number: 4 (lower is better)
Translates to: EDLQWSGKSFMSQLRFNDKMSFN*ILRWTV
Trigger: CACTGTCCATCTAAGGATGCAATTGAAGCTCATTTT...ATCATTAAACCTCAGCTGTGACATGAAAGACTTACCGGACCACTGAAGGTCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR GCA 90 bp AAATCTAGATCAGAAGTTCACTCAAGCCTACTGCAAAGGCCTGACACTGGTTTTTCAAATCTGTCATTTTaGAATCCCATCCAGAGTTGC +
Preference number: 4 (lower is better)
Translates to: KSRSEVHSSLLQRPDTGFSNLSF*NPIQSC
Trigger: GCAACTCTGGATGGGATTGCAAAATGACAGATTTGA...AAAACCAGTGTCAGGCCTTTGCAGTAGGCTTGAGTGAACTTCTGATCTAGATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343245.7
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR GCA 90 bp GCTTCATTATATTTTACAGAAGACCTTCAGTGGTCCGGTAAGTCTTTCATGTCATGTTCACTCAGCCACTaGAGAGGTGTTTCCAACATT +
Preference number: 4 (lower is better)
Translates to: ASLYFTEDLQWSGKSFMSCSLSH*RGVSNI
Trigger: AATGTTGGAAACACCTCTGCAGTGGCTGAGTGAACA...TGACATGAAAGACTTACCGGACCACTGAAGGTCTTCTGTAAAATATAATGAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR GCA 90 bp CAGAAATACAAATCGAGTGGCACATACTTCCATTTTCTTCTTAGGCCAAAGGTTAGACAAGTAATCCTATaGCCTATATCCACCCCATGC +
Preference number: 4 (lower is better)
Translates to: QKYKSSGTYFHFLLRPKVRQVIL*PISTPC
Trigger: GCATGGGGTGGATATAGGGCATAGGATTACTTGTCT...AACCTTTGGCCTAAGAAGAAAATGGAAGTATGTGCCACTCGATTTGTATTTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR GCA 90 bp AAAGCAGAGGTGATGCAAAGTAAGACCAGCCCAGTTGCCTTATCTGACATGGAAGGCTTGGTAATAAAGTaGAGCAAACTTTCCTTATAT +
Preference number: 4 (lower is better)
Translates to: KAEVMQSKTSPVALSDMEGLVIK*SKLSLY
Trigger: ATATAAGGAAAGTTTGCTGCACTTTATTACCAAGCC...TTCCATGTCAGATAAGGCAACTGGGCTGGTCTTACTTTGCATCACCTCTGCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR GCA 90 bp ATGACAGCTTCTGAGACAAGTAATCCTATGCCCTATATCCACCCCATGCCAATGGTTTCTGAGATTGTATaGTGTACTGGCTATTCTTTT +
Preference number: 4 (lower is better)
Translates to: MTASETSNPMPYIHPMPMVSEIV*CTGYSF
Trigger: AAAAGAATAGCCAGTACAGCATACAATCTCAGAAAC...CATTGGCATGGGGTGGATATAGGGCATAGGATTACTTGTCTCAGAAGCTGTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR GCA 90 bp GCAGTTGTGTTTACACCAACTCATAGACATTTATCTTCTTCGCCTATGGTGAGGTGCATAGTATGGTTCTaGTTCCCTTTCAGTTATCTC +
Preference number: 4 (lower is better)
Translates to: AVVFTPTHRHLSSSPMVRCIVWF*FPFSYL
Trigger: GAGATAACTGAAAGGGAAGCAGAACCATACTATGCA...CCTCACCATAGGCGAAGAAGATAAATGTCTATGAGTTGGTGTAAACACAACTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636335.1
CDS-3UTR CCA 90 bp GAAGACCTTCAGTGGTCCGGTAAGTCTTTCATGTCACAGCTGAGGTTTAATGATCAAAAGCAAATAGTATaGTTCTGCTTCCCTTTCAGT +
Preference number: 4 (lower is better)
Translates to: EDLQWSGKSFMSQLRFNDQKQIV*FCFPFS
Trigger: ACTGAAAGGGAAGCAGAACCATACTATTTGCTTTTG...ATCATTAAACCTCAGCTGTGACATGAAAGACTTACCGGACCACTGAAGGTCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343245.7
ENST00000369076.8
ENST00000646025.1
CDS-3UTR CCA 90 bp TCAGGATCAATAGCAGAAGGACAAACTTCTTTGAGGAGATCTCCTAGTGTGTGCAGGTGTTTCCAACATTaGCTCAATTCCATGAATCAT +
Preference number: 4 (lower is better)
Translates to: SGSIAEGQTSLRRSPSVCRCFQH*LNSMNH
Trigger: ATGATTCATGGAATTGAGCCAATGTTGGAAACACCT...GCACACACTAGGAGATCTCCTCAAAGAAGTTTGTCCTTCTGCTATTGATCCTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369070.5
ENST00000613993.1
ENST00000646025.1
CDS-3UTR CCA 90 bp TCCCCATCTTCAGGATCAATAGCAGAAGGACAAACTTCTTTGAGGAGATCTCCTTCAATCTGTTGGCTGTaGGATGATACTAATATGAAG +
Preference number: 4 (lower is better)
Translates to: SPSSGSIAEGQTSLRRSPSICWL*DDTNMK
Trigger: CTTCATATTAGTATCATCCCACAGCCAACAGATTGA...AGGAGATCTCCTCAAAGAAGTTTGTCCTTCTGCTATTGATCCTGAAGATGGGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369070.5
ENST00000613993.1
ENST00000646025.1
CDS-3UTR CCA 90 bp CAGAAATACAAATCGAGTGGCACATACTTCCATTTTCTTCTTAGGCCAAAGGTTACAGAAGACCTTCAGTaGTCCGGTAAGTCTTTCATG +
Preference number: 4 (lower is better)
Translates to: QKYKSSGTYFHFLLRPKVTEDLQ*SGKSFM
Trigger: CATGAAAGACTTACCGGACCACTGAAGGTCTTCTGT...AACCTTTGGCCTAAGAAGAAAATGGAAGTATGTGCCACTCGATTTGTATTTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR CCA 90 bp GCTTCATTATATTTTACAGAAGACCTTCAGTGGTCCGGTAAGTCTTTCATGTCAACAGAAGACCTTCAGTaGTCCGGTAAGTCTTTCATG +
Preference number: 4 (lower is better)
Translates to: ASLYFTEDLQWSGKSFMSTEDLQ*SGKSFM
Trigger: CATGAAAGACTTACCGGACCACTGAAGGTCTTCTGT...TGACATGAAAGACTTACCGGACCACTGAAGGTCTTCTGTAAAATATAATGAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR CCA 90 bp AAAGTAAGACCAGCCCAGTTGCCTTATCTGACATGGAATCTTTTTCCTGTCTGGCCATTCCAGAATATCTaGTCTTTGACCAACTTTATC +
Preference number: 4 (lower is better)
Translates to: KVRPAQLPYLTWNLFPVWPFQNI*SLTNFI
Trigger: GATAAAGTTGGTCAAAGACCAGATATTCTGGAATGG...CCAGACAGGAAAAAGATTCCATGTCAGATAAGGCAACTGGGCTGGTCTTACTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR TCA 90 bp TGGGTCAACATTCAATATGGACAGCCAGCTAGCTCACAAGAAATGAAATGTAATCATCCTGATATAGCGTaGAACAAGTTGGAATTCGTC +
Preference number: 4 (lower is better)
Translates to: WVNIQYGQPASSQEMKCNHPDIA*NKLEFV
Trigger: GACGAATTCCAACTTGTTTCACGCTATATCAGGATG...ATTACATTTCATTTCTTGTGAGCTAGCTGGCTGTCCATATTGAATGTTGACCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR TCA 90 bp ATGCAAAGTAAGACCAGCCCAGTTGCCTTATCTGACATGGAATCTTTTTCCTGTTCAGTTATCTCATCCTaGTATAGCGTGAAACAAGTT +
Preference number: 4 (lower is better)
Translates to: MQSKTSPVALSDMESFSCSVISS*YSVKQV
Trigger: AACTTGTTTCACGCTATATCAGGATGAGATAACTGA...ACAGGAAAAAGATTCCATGTCAGATAAGGCAACTGGGCTGGTCTTACTTTGCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR TCA 90 bp CCATCTTCAGGATCAATAGCAGAAGGACAAACTTCTTTGAGGAGATCTCCTAGTTCAGTTATCTCATCCTaGTATAGCGTGAAACAAGTT +
Preference number: 4 (lower is better)
Translates to: PSSGSIAEGQTSLRRSPSSVISS*YSVKQV
Trigger: AACTTGTTTCACGCTATATCAGGATGAGATAACTGA...ACTAGGAGATCTCCTCAAAGAAGTTTGTCCTTCTGCTATTGATCCTGAAGATGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369070.5
ENST00000613993.1
ENST00000646025.1
CDS-3UTR TCA 90 bp TCTGATACTGTAAGCCTTTTAGCGTACTCAAATGGGTCAACATTCAATATGGACGAAACAGCTTCTGAATaGAAGGTCTTTCAGTCGTTG +
Preference number: 4 (lower is better)
Translates to: SDTVSLLAYSNGSTFNMDETASE*KVFQSL
Trigger: CAACGACTGAAAGACCTTTCATTCAGAAGCTGTTTC...GTCCATATTGAATGTTGACCCATTTGAGTACGCTAAAAGGCTTACAGTATCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR TCA 90 bp TTTCATGAGCTAAAGTTCAACCATGGTCACCTTAGGAAATACCCCTGTTTATTTGGACGAAACAGCTTCTaGATGAAAGGTCTTTCAGTC +
Preference number: 4 (lower is better)
Translates to: FHELKFNHGHLRKYPCLFGRNSF*MKGLSV
Trigger: GACTGAAAGACCTTTCATTCAGAAGCTGTTTCGTCC...AAATAAACAGGGGTATTTCCTAAGGTGACCATGGTTGAACTTTAGCTCATGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR TCA 90 bp GCAGAGGTGTTTCCAACATTGGCTCAATTCCATGAATCATCACTTGATTCTTTTAAGGACAAACTTCTTTaGGGAGATCTCCTAGTGTGT +
Preference number: 4 (lower is better)
Translates to: AEVFPTLAQFHESSLDSFKDKLL*GDLLVC
Trigger: ACACACTAGGAGATCTCCTCAAAGAAGTTTGTCCTT...AAAAGAATCAAGTGATGATTCATGGAATTGAGCCAATGTTGGAAACACCTCTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360666.6
ENST00000369070.5
ENST00000613993.1
ENST00000646025.1
CDS-3UTR TCA 90 bp AATACAAATCGAGTGGCACATACTTCCATTTTCTTCTTAGGCCAAAGGTTTCAGAAGGACAAACTTCTTTaGGGAGATCTCCTAGTGTGT +
Preference number: 4 (lower is better)
Translates to: NTNRVAHTSIFFLGQRFQKDKLL*GDLLVC
Trigger: ACACACTAGGAGATCTCCTCAAAGAAGTTTGTCCTT...CTGAAACCTTTGGCCTAAGAAGAAAATGGAAGTATGTGCCACTCGATTTGTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR TCA 90 bp GCAGAGGTGTTTCCAACATTGGCTCAATTCCATGAATCATCACTTGATTCTTTTATTGAAGCAAAAGGGTaGCATGCTCTGATAAATCCC +
Preference number: 4 (lower is better)
Translates to: AEVFPTLAQFHESSLDSFIEAKG*HALINP
Trigger: GGGATTTATCAGAGCATGTCACCCTTTTGCTTCAAT...AAAAGAATCAAGTGATGATTCATGGAATTGAGCCAATGTTGGAAACACCTCTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360666.6
ENST00000369070.5
ENST00000646025.1
CDS-3UTR TCA 90 bp GCTTCATTATATTTTACAGAAGACCTTCAGTGGTCCGGTAAGTCTTTCATGTCAATTGAAGCAAAAGGGTaGCATGCTCTGATAAATCCC +
Preference number: 4 (lower is better)
Translates to: ASLYFTEDLQWSGKSFMSIEAKG*HALINP
Trigger: GGGATTTATCAGAGCATGTCACCCTTTTGCTTCAAT...TGACATGAAAGACTTACCGGACCACTGAAGGTCTTCTGTAAAATATAATGAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR TCA 90 bp TCCCATTTAAGGATGATTCTGTTCAGGCAAATAGTTGATCCTTCAATCTGTTGGATTGAAGCAAAAGGGTaGCATGCTCTGATAAATCCC +
Preference number: 4 (lower is better)
Translates to: SHLRMILFRQIVDPSICWIEAKG*HALINP
Trigger: GGGATTTATCAGAGCATGTCACCCTTTTGCTTCAAT...CCAACAGATTGAAGGATCAACTATTTGCCTGAACAGAATCATCCTTAAATGGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360666.6
ENST00000369070.5
ENST00000646025.1
CDS-3UTR TCA 90 bp ACCCCTGTTTATTTGTTAATCAGAAATACAAATCGAGTGGCACATACTTCCATTTCCACCAAACCTGATTaGAGCAAAAGGGTGACATGC +
Preference number: 4 (lower is better)
Translates to: TPVYLLIRNTNRVAHTSISTKPD*SKRVTC
Trigger: GCATGTCACCCTTTTGCTTCAATCAGGTTTGGTGGA...AATGGAAGTATGTGCCACTCGATTTGTATTTCTGATTAACAAATAAACAGGGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR TCA 90 bp TTTTCCCCATCTTCAGGATCAATAGCAGAAGGACAAACTTCTTTGAGGAGATCTATGTTTCCACTTTCATaGGCTAAAGTTCAACCATGG +
Preference number: 4 (lower is better)
Translates to: FSPSSGSIAEGQTSLRRSMFPLS*AKVQPW
Trigger: CCATGGTTGAACTTTAGCTCATGAAAGTGGAAACAT...AGATCTCCTCAAAGAAGTTTGTCCTTCTGCTATTGATCCTGAAGATGGGGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360666.6
ENST00000369070.5
ENST00000646025.1
CDS-3UTR TCA 90 bp AAATCTAGATCAGAAGTTCACTCAAGCCTACTGCAAAGGCCTGACACTGGTTTTGTGATCTACTGTATGTaGGTCAGAAAGTACTTGAAA +
Preference number: 4 (lower is better)
Translates to: KSRSEVHSSLLQRPDTGFVIYCM*VRKYLK
Trigger: TTTCAAGTACTTTCTGACTCACATACAGTAGATCAC...AAAACCAGTGTCAGGCCTTTGCAGTAGGCTTGAGTGAACTTCTGATCTAGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR TCA 90 bp GATACTGTAAGCCTTTTAGCGTACTCAAATGGGTCAACATTCAATATGGACAGCATGCTTAGGATACTATaGTTTGACAGGCTTACAGTG +
Preference number: 4 (lower is better)
Translates to: DTVSLLAYSNGSTFNMDSMLRIL*FDRLTV
Trigger: CACTGTAAGCCTGTCAAATCATAGTATCCTAAGCAT...GCTGTCCATATTGAATGTTGACCCATTTGAGTACGCTAAAAGGCTTACAGTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR TCA 90 bp GTTTCAGCTTCATTATATTTTACAGAAGACCTTCAGTGGTCCGGTAAGTCTTTCAACCATGATCGTGTCTaGTACTGTAAGCCTTTTAGC +
Preference number: 4 (lower is better)
Translates to: VSASLYFTEDLQWSGKSFNHDRV*YCKPFS
Trigger: GCTAAAAGGCTTACAGTATCAGACACGATCATGGTT...GAAAGACTTACCGGACCACTGAAGGTCTTCTGTAAAATATAATGAAGCTGAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR TCA 90 bp ATCTCTCACTGTTCATTATCAAAGTTACAAGATTGCATACCAATAGACAGACTGCCTACTGCAAAGGCCTaGCACTGGTTTTGTCTGTAT +
Preference number: 4 (lower is better)
Translates to: ISHCSLSKLQDCIPIDRLPTAKA*HWFCLY
Trigger: ATACAGACAAAACCAGTGTCAGGCCTTTGCAGTAGG...CAGTCTGTCTATTGGTATGCAATCTTGTAACTTTGATAATGAACAGTGAGAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR GCA 90 bp GTGACATGCTCTGATAAATCCCATTTAAGGATGATTCTGTTCAGGCAAATAGTTTGTTCACTCAGCCACTaGAGAGGTGTTTCCAACATT +
Preference number: 4 (lower is better)
Translates to: VTCSDKSHLRMILFRQIVCSLSH*RGVSNI
Trigger: AATGTTGGAAACACCTCTGCAGTGGCTGAGTGAACA...AACTATTTGCCTGAACAGAATCATCCTTAAATGGGATTTATCAGAGCATGTCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR GCA 90 bp TATTTTACAGAAGACCTTCAGTGGTCCGGTAAGTCTTTCATGTCACAGCTGAGGTTAAAGAAAAGGTACTaGAGTCAAGAGACAGGTAAT +
Preference number: 4 (lower is better)
Translates to: YFTEDLQWSGKSFMSQLRLKKRY*SQETGN
Trigger: ATTACCTGTCTCTTGACTGCAGTACCTTTTCTTTAA...CCTCAGCTGTGACATGAAAGACTTACCGGACCACTGAAGGTCTTCTGTAAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR GCA 90 bp GAAGACCTTCAGTGGTCCGGTAAGTCTTTCATGTCACAGCTGAGGTTTAATGATGGCTTGGTAATAAAGTaGAGCAAACTTTCCTTATAT +
Preference number: 4 (lower is better)
Translates to: EDLQWSGKSFMSQLRFNDGLVIK*SKLSLY
Trigger: ATATAAGGAAAGTTTGCTGCACTTTATTACCAAGCC...ATCATTAAACCTCAGCTGTGACATGAAAGACTTACCGGACCACTGAAGGTCTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR CCA 90 bp TCTTCAGGATCAATAGCAGAAGGACAAACTTCTTTGAGGAGATCTCCTAGTGTGCAAAAGCAAATAGTATaGTTCTGCTTCCCTTTCAGT +
Preference number: 4 (lower is better)
Translates to: SSGSIAEGQTSLRRSPSVQKQIV*FCFPFS
Trigger: ACTGAAAGGGAAGCAGAACCATACTATTTGCTTTTG...CACACTAGGAGATCTCCTCAAAGAAGTTTGTCCTTCTGCTATTGATCCTGAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613993.1
ENST00000646025.1
CDS-3UTR CCA 90 bp AAATCTAGATCAGAAGTTCACTCAAGCCTACTGCAAAGGCCTGACACTGGTTTTAGGTGTTTCCAACATTaGCTCAATTCCATGAATCAT +
Preference number: 4 (lower is better)
Translates to: KSRSEVHSSLLQRPDTGFRCFQH*LNSMNH
Trigger: ATGATTCATGGAATTGAGCCAATGTTGGAAACACCT...AAAACCAGTGTCAGGCCTTTGCAGTAGGCTTGAGTGAACTTCTGATCTAGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR CCA 90 bp TTTTCCCCATCTTCAGGATCAATAGCAGAAGGACAAACTTCTTTGAGGAGATCTGATCCTTCAATCTGTTaGCTGTGGGATGATACTAAT +
Preference number: 4 (lower is better)
Translates to: FSPSSGSIAEGQTSLRRSDPSIC*LWDDTN
Trigger: ATTAGTATCATCCCACAGCCAACAGATTGAAGGATC...AGATCTCCTCAAAGAAGTTTGTCCTTCTGCTATTGATCCTGAAGATGGGGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360666.6
ENST00000369070.5
ENST00000646025.1
CDS-3UTR CCA 90 bp TTCAAATCTAGATCAGAAGTTCACTCAAGCCTACTGCAAAGGCCTGACACTGGTTTTAGCGTACTCAAATaGGTCAACATTCAATATGGA +
Preference number: 4 (lower is better)
Translates to: FKSRSEVHSSLLQRPDTGFSVLK*VNIQYG
Trigger: TCCATATTGAATGTTGACCCATTTGAGTACGCTAAA...ACCAGTGTCAGGCCTTTGCAGTAGGCTTGAGTGAACTTCTGATCTAGATTTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR CCA 90 bp AAAGTAAGACCAGCCCAGTTGCCTTATCTGACATGGAATCTTTTTCCTGTCTGGCTGCCTTTACTAAAATaGCACTTTCGTTTACATCAA +
Preference number: 4 (lower is better)
Translates to: KVRPAQLPYLTWNLFPVWLPLLK*HFRLHQ
Trigger: TTGATGTAAACGAAAGTGCCATTTTAGTAAAGGCAG...CCAGACAGGAAAAAGATTCCATGTCAGATAAGGCAACTGGGCTGGTCTTACTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR CCA 90 bp TATTTTACAGAAGACCTTCAGTGGTCCGGTAAGTCTTTCATGTCACAGCTGAGGCTGCCTTTACTAAAATaGCACTTTCGTTTACATCAA +
Preference number: 4 (lower is better)
Translates to: YFTEDLQWSGKSFMSQLRLPLLK*HFRLHQ
Trigger: TTGATGTAAACGAAAGTGCCATTTTAGTAAAGGCAG...CCTCAGCTGTGACATGAAAGACTTACCGGACCACTGAAGGTCTTCTGTAAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR CCA 90 bp CCACTGCAGAGGTGTTTCCAACATTGGCTCAATTCCATGAATCATCACTTGATTTTGATGGCCCAAAACTaGTCAAATCTGTATAGTATG +
Preference number: 4 (lower is better)
Translates to: PLQRCFQHWLNSMNHHLILMAQN*SNLYSM
Trigger: CATACTATACAGATTTGACCAGTTTTGGGCCATCAA...AATCAAGTGATGATTCATGGAATTGAGCCAATGTTGGAAACACCTCTGCAGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360666.6
3UTR CAA 72 bp TTCCATTTTCTGATGCCCTTGGCTGGGCTTTTGCAGTaGTGTTTACACCAACTCATAGACATTTATCTTCTT +
Preference number: 4 (lower is better)
Translates to: FHFLMPLAGLLQ*CLHQLIDIYLL
Trigger: AAGAAGATAAATGTCTATGAGTTGGTGTAAACACAACTGCAAAAGCCCAGCCAAGGGCATCAGAAAATGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636335.1
3UTR CAA 72 bp AATGTGTTCCATTTTCTGATGCCCTTGGCTGGGCTTTaGCAGTTGTGTTTACACCAACTCATAGACATTTAT +
Preference number: 4 (lower is better)
Translates to: NVFHFLMPLAGL*QLCLHQLIDIY
Trigger: ATAAATGTCTATGAGTTGGTGTAAACACAACTGCAAAAGCCCAGCCAAGGGCATCAGAAAATGGAACACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636335.1
CDS-3UTR TCA 90 bp TTTCATGAGCTAAAGTTCAACCATGGTCACCTTAGGAAATACCCCTGTTTATTTAAGGACAAACTTCTTTaGGGAGATCTCCTAGTGTGT +
Preference number: 4 (lower is better)
Translates to: FHELKFNHGHLRKYPCLFKDKLL*GDLLVC
Trigger: ACACACTAGGAGATCTCCTCAAAGAAGTTTGTCCTT...AAATAAACAGGGGTATTTCCTAAGGTGACCATGGTTGAACTTTAGCTCATGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR TCA 90 bp ATGGGATCTAAAACCATGATCGTGTCTGATACTGTAAGCCTTTTAGCGTACTCAGTGATCTACTGTATGTaGGTCAGAAAGTACTTGAAA +
Preference number: 4 (lower is better)
Translates to: MGSKTMIVSDTVSLLAYSVIYCM*VRKYLK
Trigger: TTTCAAGTACTTTCTGACTCACATACAGTAGATCAC...TGAGTACGCTAAAAGGCTTACAGTATCAGACACGATCATGGTTTTAGATCCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR TCA 90 bp GCTTCATTATATTTTACAGAAGACCTTCAGTGGTCCGGTAAGTCTTTCATGTCACAGCAAGAAATTCTATaGCAGCTTCTGAGACAAGTA +
Preference number: 4 (lower is better)
Translates to: ASLYFTEDLQWSGKSFMSQQEIL*QLLRQV
Trigger: TACTTGTCTCAGAAGCTGTCATAGAATTTCTTGCTG...TGACATGAAAGACTTACCGGACCACTGAAGGTCTTCTGTAAAATATAATGAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR TCA 90 bp AAAAGGGTGACATGCTCTGATAAATCCCATTTAAGGATGATTCTGTTCAGGCAACAGCAAGAAATTCTATaGCAGCTTCTGAGACAAGTA +
Preference number: 4 (lower is better)
Translates to: KRVTCSDKSHLRMILFRQQQEIL*QLLRQV
Trigger: TACTTGTCTCAGAAGCTGTCATAGAATTTCTTGCTG...TTGCCTGAACAGAATCATCCTTAAATGGGATTTATCAGAGCATGTCACCCTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR TCA 90 bp TCCCATTTAAGGATGATTCTGTTCAGGCAAATAGTTGATCCTTCAATCTGTTGGCAGCAAGAAATTCTATaGCAGCTTCTGAGACAAGTA +
Preference number: 4 (lower is better)
Translates to: SHLRMILFRQIVDPSICWQQEIL*QLLRQV
Trigger: TACTTGTCTCAGAAGCTGTCATAGAATTTCTTGCTG...CCAACAGATTGAAGGATCAACTATTTGCCTGAACAGAATCATCCTTAAATGGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360666.6
ENST00000369070.5
CDS-3UTR TCA 90 bp TGGGTCAACATTCAATATGGACAGCCAGCTAGCTCACAAGAAATGAAATGTAATCAGCAAGAAATTCTATaGCAGCTTCTGAGACAAGTA +
Preference number: 4 (lower is better)
Translates to: WVNIQYGQPASSQEMKCNQQEIL*QLLRQV
Trigger: TACTTGTCTCAGAAGCTGTCATAGAATTTCTTGCTG...ATTACATTTCATTTCTTGTGAGCTAGCTGGCTGTCCATATTGAATGTTGACCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR TCA 90 bp GTTTCAGCTTCATTATATTTTACAGAAGACCTTCAGTGGTCCGGTAAGTCTTTCCAGCAAGAAATTCTATaGCAGCTTCTGAGACAAGTA +
Preference number: 4 (lower is better)
Translates to: VSASLYFTEDLQWSGKSFQQEIL*QLLRQV
Trigger: TACTTGTCTCAGAAGCTGTCATAGAATTTCTTGCTG...GAAAGACTTACCGGACCACTGAAGGTCTTCTGTAAAATATAATGAAGCTGAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR TCA 90 bp TGGGTCAACATTCAATATGGACAGCCAGCTAGCTCACAAGAAATGAAATGTAATATGCTTAGGATACTATaGTTTGACAGGCTTACAGTG +
Preference number: 4 (lower is better)
Translates to: WVNIQYGQPASSQEMKCNMLRIL*FDRLTV
Trigger: CACTGTAAGCCTGTCAAATCATAGTATCCTAAGCAT...ATTACATTTCATTTCTTGTGAGCTAGCTGGCTGTCCATATTGAATGTTGACCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR TCA 90 bp TCTGATACTGTAAGCCTTTTAGCGTACTCAAATGGGTCAACATTCAATATGGACATGCACAAATATGTTTaGCTGGTAAAATCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: SDTVSLLAYSNGSTFNMDMHKYV*LVKSQR
Trigger: CCTCTGGGATTTTACCAGTCAAACATATTTGTGCAT...GTCCATATTGAATGTTGACCCATTTGAGTACGCTAAAAGGCTTACAGTATCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR TCA 90 bp TGGGTCAACATTCAATATGGACAGCCAGCTAGCTCACAAGAAATGAAATGTAATTTGCTTCTAAGTTTCTaGGATTGTATGCTGTACTGG +
Preference number: 4 (lower is better)
Translates to: WVNIQYGQPASSQEMKCNLLLSF*DCMLYW
Trigger: CCAGTACAGCATACAATCTCAGAAACTTAGAAGCAA...ATTACATTTCATTTCTTGTGAGCTAGCTGGCTGTCCATATTGAATGTTGACCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR TCA 90 bp GCAGAGGTGTTTCCAACATTGGCTCAATTCCATGAATCATCACTTGATTCTTTTTTGCTTCTAAGTTTCTaGGATTGTATGCTGTACTGG +
Preference number: 4 (lower is better)
Translates to: AEVFPTLAQFHESSLDSFLLLSF*DCMLYW
Trigger: CCAGTACAGCATACAATCTCAGAAACTTAGAAGCAA...AAAAGAATCAAGTGATGATTCATGGAATTGAGCCAATGTTGGAAACACCTCTGC
39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000360666.6
ENST00000369070.5
CDS-3UTR TCA 90 bp AGGGTGACATGCTCTGATAAATCCCATTTAAGGATGATTCTGTTCAGGCAAATATTGCTTCTAAGTTTCTaGGATTGTATGCTGTACTGG +
Preference number: 4 (lower is better)
Translates to: RVTCSDKSHLRMILFRQILLLSF*DCMLYW
Trigger: CCAGTACAGCATACAATCTCAGAAACTTAGAAGCAA...TATTTGCCTGAACAGAATCATCCTTAAATGGGATTTATCAGAGCATGTCACCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR GCA 90 bp TTTTCCCCATCTTCAGGATCAATAGCAGAAGGACAAACTTCTTTGAGGAGATCTCAAATAGTATGGTTCTaGTTCCCTTTCAGTTATCTC +
Preference number: 4 (lower is better)
Translates to: FSPSSGSIAEGQTSLRRSQIVWF*FPFSYL
Trigger: GAGATAACTGAAAGGGAAGCAGAACCATACTATTTG...AGATCTCCTCAAAGAAGTTTGTCCTTCTGCTATTGATCCTGAAGATGGGGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613993.1
ENST00000646025.1
CDS-3UTR GCA 90 bp TACCCCTGTTTATTTGTTAATCAGAAATACAAATCGAGTGGCACATACTTCCATTGTTCACTCAGCCACTaGAGAGGTGTTTCCAACATT +
Preference number: 4 (lower is better)
Translates to: YPCLFVNQKYKSSGTYFHCSLSH*RGVSNI
Trigger: AATGTTGGAAACACCTCTGCAGTGGCTGAGTGAACA...ATGGAAGTATGTGCCACTCGATTTGTATTTCTGATTAACAAATAAACAGGGGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR GCA 90 bp ACCCCTGTTTATTTGTTAATCAGAAATACAAATCGAGTGGCACATACTTCCATTTGTTCACTCAGCCACTaGAGAGGTGTTTCCAACATT +
Preference number: 4 (lower is better)
Translates to: TPVYLLIRNTNRVAHTSICSLSH*RGVSNI
Trigger: AATGTTGGAAACACCTCTGCAGTGGCTGAGTGAACA...AATGGAAGTATGTGCCACTCGATTTGTATTTCTGATTAACAAATAAACAGGGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR GCA 90 bp TACCCCTGTTTATTTGTTAATCAGAAATACAAATCGAGTGGCACATACTTCCATAGACAAGTAATCCTATaGCCTATATCCACCCCATGC +
Preference number: 4 (lower is better)
Translates to: YPCLFVNQKYKSSGTYFHRQVIL*PISTPC
Trigger: GCATGGGGTGGATATAGGGCATAGGATTACTTGTCT...ATGGAAGTATGTGCCACTCGATTTGTATTTCTGATTAACAAATAAACAGGGGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR GCA 90 bp AAATCTAGATCAGAAGTTCACTCAAGCCTACTGCAAAGGCCTGACACTGGTTTTGTTTCTGAGATTGTATaGTGTACTGGCTATTCTTTT +
Preference number: 4 (lower is better)
Translates to: KSRSEVHSSLLQRPDTGFVSEIV*CTGYSF
Trigger: AAAAGAATAGCCAGTACAGCATACAATCTCAGAAAC...AAAACCAGTGTCAGGCCTTTGCAGTAGGCTTGAGTGAACTTCTGATCTAGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR CCA 90 bp AAAAGGGTGACATGCTCTGATAAATCCCATTTAAGGATGATTCTGTTCAGGCAAAATTGCATCCTTAGATaGACAGTGCAGAAGGTCTTT +
Preference number: 4 (lower is better)
Translates to: KRVTCSDKSHLRMILFRQNCILR*TVQKVF
Trigger: AAAGACCTTCTGCACTGTCCATCTAAGGATGCAATT...TTGCCTGAACAGAATCATCCTTAAATGGGATTTATCAGAGCATGTCACCCTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR CCA 90 bp AGGGTGACATGCTCTGATAAATCCCATTTAAGGATGATTCTGTTCAGGCAAATATTGATGGCCCAAAACTaGTCAAATCTGTCATTTTGC +
Preference number: 4 (lower is better)
Translates to: RVTCSDKSHLRMILFRQILMAQN*SNLSFC
Trigger: GCAAAATGACAGATTTGACCAGTTTTGGGCCATCAA...TATTTGCCTGAACAGAATCATCCTTAAATGGGATTTATCAGAGCATGTCACCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR CCA 90 bp ATGGGATCTAAAACCATGATCGTGTCTGATACTGTAAGCCTTTTAGCGTACTCATCAATCTGTTGGCTGTaGGATGATACTAATATGAAG +
Preference number: 4 (lower is better)
Translates to: MGSKTMIVSDTVSLLAYSSICWL*DDTNMK
Trigger: CTTCATATTAGTATCATCCCACAGCCAACAGATTGA...TGAGTACGCTAAAAGGCTTACAGTATCAGACACGATCATGGTTTTAGATCCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR CCA 90 bp AATACAAATCGAGTGGCACATACTTCCATTTTCTTCTTAGGCCAAAGGTTTCAGGATCCTTCAATCTGTTaGCTGTGGGATGATACTAAT +
Preference number: 4 (lower is better)
Translates to: NTNRVAHTSIFFLGQRFQDPSIC*LWDDTN
Trigger: ATTAGTATCATCCCACAGCCAACAGATTGAAGGATC...CTGAAACCTTTGGCCTAAGAAGAAAATGGAAGTATGTGCCACTCGATTTGTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR CCA 90 bp AAAAGGGTGACATGCTCTGATAAATCCCATTTAAGGATGATTCTGTTCAGGCAATTGCCTTATCTGACATaGAATCTTTTTCCTGTCTGG +
Preference number: 4 (lower is better)
Translates to: KRVTCSDKSHLRMILFRQLPYLT*NLFPVW
Trigger: CCAGACAGGAAAAAGATTCCATGTCAGATAAGGCAA...TTGCCTGAACAGAATCATCCTTAAATGGGATTTATCAGAGCATGTCACCCTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR CCA 90 bp CCATCTTCAGGATCAATAGCAGAAGGACAAACTTCTTTGAGGAGATCTCCTAGTGAAATACAAATCGAGTaGCACATACTTCCATTTTCT +
Preference number: 4 (lower is better)
Translates to: PSSGSIAEGQTSLRRSPSEIQIE*HILPFS
Trigger: AGAAAATGGAAGTATGTGCCACTCGATTTGTATTTC...ACTAGGAGATCTCCTCAAAGAAGTTTGTCCTTCTGCTATTGATCCTGAAGATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369070.5
ENST00000646025.1
CDS-3UTR TCA 90 bp ATCTCTCACTGTTCATTATCAAAGTTACAAGATTGCATACCAATAGACAGACTGCATCCTGATATAGCGTaGAACAAGTTGGAATTCGTC +
Preference number: 4 (lower is better)
Translates to: ISHCSLSKLQDCIPIDRLHPDIA*NKLEFV
Trigger: GACGAATTCCAACTTGTTTCACGCTATATCAGGATG...CAGTCTGTCTATTGGTATGCAATCTTGTAACTTTGATAATGAACAGTGAGAGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR TCA 90 bp TACCCCTGTTTATTTGTTAATCAGAAATACAAATCGAGTGGCACATACTTCCATGAAACAGCTTCTGAATaGAAGGTCTTTCAGTCGTTG +
Preference number: 4 (lower is better)
Translates to: YPCLFVNQKYKSSGTYFHETASE*KVFQSL
Trigger: CAACGACTGAAAGACCTTTCATTCAGAAGCTGTTTC...ATGGAAGTATGTGCCACTCGATTTGTATTTCTGATTAACAAATAAACAGGGGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR TCA 90 bp TCTGATAAATCCCATTTAAGGATGATTCTGTTCAGGCAAATAGTTGATCCTTCAGAAACAGCTTCTGAATaGAAGGTCTTTCAGTCGTTG +
Preference number: 4 (lower is better)
Translates to: SDKSHLRMILFRQIVDPSETASE*KVFQSL
Trigger: CAACGACTGAAAGACCTTTCATTCAGAAGCTGTTTC...TGAAGGATCAACTATTTGCCTGAACAGAATCATCCTTAAATGGGATTTATCAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360666.6
ENST00000369070.5
ENST00000646025.1
CDS-3UTR TCA 90 bp TACCCCTGTTTATTTGTTAATCAGAAATACAAATCGAGTGGCACATACTTCCATAAGGACAAACTTCTTTaGGGAGATCTCCTAGTGTGT +
Preference number: 4 (lower is better)
Translates to: YPCLFVNQKYKSSGTYFHKDKLL*GDLLVC
Trigger: ACACACTAGGAGATCTCCTCAAAGAAGTTTGTCCTT...ATGGAAGTATGTGCCACTCGATTTGTATTTCTGATTAACAAATAAACAGGGGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR TCA 90 bp ATCTCTCACTGTTCATTATCAAAGTTACAAGATTGCATACCAATAGACAGACTGAAGGACAAACTTCTTTaGGGAGATCTCCTAGTGTGT +
Preference number: 4 (lower is better)
Translates to: ISHCSLSKLQDCIPIDRLKDKLL*GDLLVC
Trigger: ACACACTAGGAGATCTCCTCAAAGAAGTTTGTCCTT...CAGTCTGTCTATTGGTATGCAATCTTGTAACTTTGATAATGAACAGTGAGAGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR TCA 90 bp TTTCATGAGCTAAAGTTCAACCATGGTCACCTTAGGAAATACCCCTGTTTATTTATGTTTCCACTTTCATaGGCTAAAGTTCAACCATGG +
Preference number: 4 (lower is better)
Translates to: FHELKFNHGHLRKYPCLFMFPLS*AKVQPW
Trigger: CCATGGTTGAACTTTAGCTCATGAAAGTGGAAACAT...AAATAAACAGGGGTATTTCCTAAGGTGACCATGGTTGAACTTTAGCTCATGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR TCA 90 bp GTTTCAGCTTCATTATATTTTACAGAAGACCTTCAGTGGTCCGGTAAGTCTTTCGTGATCTACTGTATGTaGGTCAGAAAGTACTTGAAA +
Preference number: 4 (lower is better)
Translates to: VSASLYFTEDLQWSGKSFVIYCM*VRKYLK
Trigger: TTTCAAGTACTTTCTGACTCACATACAGTAGATCAC...GAAAGACTTACCGGACCACTGAAGGTCTTCTGTAAAATATAATGAAGCTGAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR TCA 90 bp TACCCCTGTTTATTTGTTAATCAGAAATACAAATCGAGTGGCACATACTTCCATAACCATGATCGTGTCTaGTACTGTAAGCCTTTTAGC +
Preference number: 4 (lower is better)
Translates to: YPCLFVNQKYKSSGTYFHNHDRV*YCKPFS
Trigger: GCTAAAAGGCTTACAGTATCAGACACGATCATGGTT...ATGGAAGTATGTGCCACTCGATTTGTATTTCTGATTAACAAATAAACAGGGGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR GCA 90 bp TCTGATACTGTAAGCCTTTTAGCGTACTCAAATGGGTCAACATTCAATATGGACCAAATAGTATGGTTCTaGTTCCCTTTCAGTTATCTC +
Preference number: 4 (lower is better)
Translates to: SDTVSLLAYSNGSTFNMDQIVWF*FPFSYL
Trigger: GAGATAACTGAAAGGGAAGCAGAACCATACTATTTG...GTCCATATTGAATGTTGACCCATTTGAGTACGCTAAAAGGCTTACAGTATCAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343245.7
ENST00000369076.8
CDS-3UTR GCA 90 bp GTTTCAGCTTCATTATATTTTACAGAAGACCTTCAGTGGTCCGGTAAGTCTTTCCAAATAGTATGGTTCTaGTTCCCTTTCAGTTATCTC +
Preference number: 4 (lower is better)
Translates to: VSASLYFTEDLQWSGKSFQIVWF*FPFSYL
Trigger: GAGATAACTGAAAGGGAAGCAGAACCATACTATTTG...GAAAGACTTACCGGACCACTGAAGGTCTTCTGTAAAATATAATGAAGCTGAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343245.7
ENST00000369076.8
ENST00000646025.1
CDS-3UTR GCA 90 bp GCAGAGGTGTTTCCAACATTGGCTCAATTCCATGAATCATCACTTGATTCTTTTAAAATGAGCTTCAATTaGATCCTTAGATGGACAGTG +
Preference number: 4 (lower is better)
Translates to: AEVFPTLAQFHESSLDSFKMSFN*ILRWTV
Trigger: CACTGTCCATCTAAGGATGCAATTGAAGCTCATTTT...AAAAGAATCAAGTGATGATTCATGGAATTGAGCCAATGTTGGAAACACCTCTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369070.5
ENST00000613993.1
ENST00000646025.1
CDS-3UTR GCA 90 bp AGGAAAAGATGTCCTTCATACTTCTTAGCTGTTTCACTCCTGGAAGACATAAATTCAAATCTGTCATTTTaGAATCCCATCCAGAGTTGC +
Preference number: 4 (lower is better)
Translates to: RKRCPSYFLAVSLLEDINSNLSF*NPIQSC
Trigger: GCAACTCTGGATGGGATTGCAAAATGACAGATTTGA...ATTTATGTCTTCCAGGAGTGAAACAGCTAAGAAGTATGAAGGACATCTTTTCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636335.1
CDS-3UTR GCA 90 bp TTTTCCCCATCTTCAGGATCAATAGCAGAAGGACAAACTTCTTTGAGGAGATCTTTAAAGAAAAGGTACTaGAGTCAAGAGACAGGTAAT +
Preference number: 4 (lower is better)
Translates to: FSPSSGSIAEGQTSLRRSLKKRY*SQETGN
Trigger: ATTACCTGTCTCTTGACTGCAGTACCTTTTCTTTAA...AGATCTCCTCAAAGAAGTTTGTCCTTCTGCTATTGATCCTGAAGATGGGGAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360666.6
ENST00000369070.5
CDS-3UTR GCA 90 bp GATACTGTAAGCCTTTTAGCGTACTCAAATGGGTCAACATTCAATATGGACAGCTTAAAGAAAAGGTACTaGAGTCAAGAGACAGGTAAT +
Preference number: 4 (lower is better)
Translates to: DTVSLLAYSNGSTFNMDSLKKRY*SQETGN
Trigger: ATTACCTGTCTCTTGACTGCAGTACCTTTTCTTTAA...GCTGTCCATATTGAATGTTGACCCATTTGAGTACGCTAAAAGGCTTACAGTATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR CCA 90 bp TTTCATGAGCTAAAGTTCAACCATGGTCACCTTAGGAAATACCCCTGTTTATTTTTGATGGCCCAAAACTaGTCAAATCTGTCATTTTGC +
Preference number: 4 (lower is better)
Translates to: FHELKFNHGHLRKYPCLFLMAQN*SNLSFC
Trigger: GCAAAATGACAGATTTGACCAGTTTTGGGCCATCAA...AAATAAACAGGGGTATTTCCTAAGGTGACCATGGTTGAACTTTAGCTCATGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR CCA 90 bp GTTTCAGCTTCATTATATTTTACAGAAGACCTTCAGTGGTCCGGTAAGTCTTTCAGGTGTTTCCAACATTaGCTCAATTCCATGAATCAT +
Preference number: 4 (lower is better)
Translates to: VSASLYFTEDLQWSGKSFRCFQH*LNSMNH
Trigger: ATGATTCATGGAATTGAGCCAATGTTGGAAACACCT...GAAAGACTTACCGGACCACTGAAGGTCTTCTGTAAAATATAATGAAGCTGAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR CCA 90 bp TGGGTCAACATTCAATATGGACAGCCAGCTAGCTCACAAGAAATGAAATGTAATTCAATCTGTTGGCTGTaGGATGATACTAATATGAAG +
Preference number: 4 (lower is better)
Translates to: WVNIQYGQPASSQEMKCNSICWL*DDTNMK
Trigger: CTTCATATTAGTATCATCCCACAGCCAACAGATTGA...ATTACATTTCATTTCTTGTGAGCTAGCTGGCTGTCCATATTGAATGTTGACCCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR CCA 90 bp GCAGAGGTGTTTCCAACATTGGCTCAATTCCATGAATCATCACTTGATTCTTTTTCAATCTGTTGGCTGTaGGATGATACTAATATGAAG +
Preference number: 4 (lower is better)
Translates to: AEVFPTLAQFHESSLDSFSICWL*DDTNMK
Trigger: CTTCATATTAGTATCATCCCACAGCCAACAGATTGA...AAAAGAATCAAGTGATGATTCATGGAATTGAGCCAATGTTGGAAACACCTCTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360666.6
ENST00000369070.5
ENST00000613993.1
ENST00000646025.1
CDS-3UTR CCA 90 bp AGGGTGACATGCTCTGATAAATCCCATTTAAGGATGATTCTGTTCAGGCAAATACCATTCCAGAATATCTaGTCTTTGACCAACTTTATC +
Preference number: 4 (lower is better)
Translates to: RVTCSDKSHLRMILFRQIPFQNI*SLTNFI
Trigger: GATAAAGTTGGTCAAAGACCAGATATTCTGGAATGG...TATTTGCCTGAACAGAATCATCCTTAAATGGGATTTATCAGAGCATGTCACCCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR CCA 90 bp AATACAAATCGAGTGGCACATACTTCCATTTTCTTCTTAGGCCAAAGGTTTCAGCAAATCTGTATAGTATaGTTCTGCTTCCCTTTCAGT +
Preference number: 4 (lower is better)
Translates to: NTNRVAHTSIFFLGQRFQQICIV*FCFPFS
Trigger: ACTGAAAGGGAAGCAGAACCATACTATACAGATTTG...CTGAAACCTTTGGCCTAAGAAGAAAATGGAAGTATGTGCCACTCGATTTGTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360666.6
3UTR CAA 72 bp TCAACCATGGTCACCTTAGGAAATACCCCTGTTTATTaGTTAATCAGAAATACAAATCGAGTGGCACATACT +
Preference number: 4 (lower is better)
Translates to: STMVTLGNTPVY*LIRNTNRVAHT
Trigger: AGTATGTGCCACTCGATTTGTATTTCTGATTAACAAATAAACAGGGGTATTTCCTAAGGTGACCATGGTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR TCA 90 bp TACCCCTGTTTATTTGTTAATCAGAAATACAAATCGAGTGGCACATACTTCCATATGTTTCCACTTTCATaGGCTAAAGTTCAACCATGG +
Preference number: 4 (lower is better)
Translates to: YPCLFVNQKYKSSGTYFHMFPLS*AKVQPW
Trigger: CCATGGTTGAACTTTAGCTCATGAAAGTGGAAACAT...ATGGAAGTATGTGCCACTCGATTTGTATTTCTGATTAACAAATAAACAGGGGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR GCA 90 bp AGGGTGACATGCTCTGATAAATCCCATTTAAGGATGATTCTGTTCAGGCAAATAGGCTTGGTAATAAAGTaGAGCAAACTTTCCTTATAT +
Preference number: 4 (lower is better)
Translates to: RVTCSDKSHLRMILFRQIGLVIK*SKLSLY
Trigger: ATATAAGGAAAGTTTGCTGCACTTTATTACCAAGCC...TATTTGCCTGAACAGAATCATCCTTAAATGGGATTTATCAGAGCATGTCACCCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR GCA 90 bp TGGGTCAACATTCAATATGGACAGCCAGCTAGCTCACAAGAAATGAAATGTAATGTTTCTGAGATTGTATaGTGTACTGGCTATTCTTTT +
Preference number: 4 (lower is better)
Translates to: WVNIQYGQPASSQEMKCNVSEIV*CTGYSF
Trigger: AAAAGAATAGCCAGTACAGCATACAATCTCAGAAAC...ATTACATTTCATTTCTTGTGAGCTAGCTGGCTGTCCATATTGAATGTTGACCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR GCA 90 bp TCTGATACTGTAAGCCTTTTAGCGTACTCAAATGGGTCAACATTCAATATGGACGTTTCTGAGATTGTATaGTGTACTGGCTATTCTTTT +
Preference number: 4 (lower is better)
Translates to: SDTVSLLAYSNGSTFNMDVSEIV*CTGYSF
Trigger: AAAAGAATAGCCAGTACAGCATACAATCTCAGAAAC...GTCCATATTGAATGTTGACCCATTTGAGTACGCTAAAAGGCTTACAGTATCAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR CCA 90 bp TTTCATGAGCTAAAGTTCAACCATGGTCACCTTAGGAAATACCCCTGTTTATTTCAAAAGCAAATAGTATaGTTCTGCTTCCCTTTCAGT +
Preference number: 4 (lower is better)
Translates to: FHELKFNHGHLRKYPCLFQKQIV*FCFPFS
Trigger: ACTGAAAGGGAAGCAGAACCATACTATTTGCTTTTG...AAATAAACAGGGGTATTTCCTAAGGTGACCATGGTTGAACTTTAGCTCATGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343245.7
ENST00000369076.8
ENST00000646025.1
CDS-3UTR CCA 90 bp ATCTCTCACTGTTCATTATCAAAGTTACAAGATTGCATACCAATAGACAGACTGTTGATGGCCCAAAACTaGTCAAATCTGTCATTTTGC +
Preference number: 4 (lower is better)
Translates to: ISHCSLSKLQDCIPIDRLLMAQN*SNLSFC
Trigger: GCAAAATGACAGATTTGACCAGTTTTGGGCCATCAA...CAGTCTGTCTATTGGTATGCAATCTTGTAACTTTGATAATGAACAGTGAGAGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR CCA 90 bp GTGACATGCTCTGATAAATCCCATTTAAGGATGATTCTGTTCAGGCAAATAGTTTCAATCTGTTGGCTGTaGGATGATACTAATATGAAG +
Preference number: 4 (lower is better)
Translates to: VTCSDKSHLRMILFRQIVSICWL*DDTNMK
Trigger: CTTCATATTAGTATCATCCCACAGCCAACAGATTGA...AACTATTTGCCTGAACAGAATCATCCTTAAATGGGATTTATCAGAGCATGTCAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR CCA 90 bp TTTCATGAGCTAAAGTTCAACCATGGTCACCTTAGGAAATACCCCTGTTTATTTTCAATCTGTTGGCTGTaGGATGATACTAATATGAAG +
Preference number: 4 (lower is better)
Translates to: FHELKFNHGHLRKYPCLFSICWL*DDTNMK
Trigger: CTTCATATTAGTATCATCCCACAGCCAACAGATTGA...AAATAAACAGGGGTATTTCCTAAGGTGACCATGGTTGAACTTTAGCTCATGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR CCA 90 bp ACCCCTGTTTATTTGTTAATCAGAAATACAAATCGAGTGGCACATACTTCCATTTTGCCTTATCTGACATaGAATCTTTTTCCTGTCTGG +
Preference number: 4 (lower is better)
Translates to: TPVYLLIRNTNRVAHTSILPYLT*NLFPVW
Trigger: CCAGACAGGAAAAAGATTCCATGTCAGATAAGGCAA...AATGGAAGTATGTGCCACTCGATTTGTATTTCTGATTAACAAATAAACAGGGGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR CCA 90 bp TCCCATTTAAGGATGATTCTGTTCAGGCAAATAGTTGATCCTTCAATCTGTTGGGAAATACAAATCGAGTaGCACATACTTCCATTTTCT +
Preference number: 4 (lower is better)
Translates to: SHLRMILFRQIVDPSICWEIQIE*HILPFS
Trigger: AGAAAATGGAAGTATGTGCCACTCGATTTGTATTTC...CCAACAGATTGAAGGATCAACTATTTGCCTGAACAGAATCATCCTTAAATGGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360666.6
ENST00000369070.5
ENST00000646025.1
CDS-3UTR CCA 90 bp TCTGATACTGTAAGCCTTTTAGCGTACTCAAATGGGTCAACATTCAATATGGACTTTAGCGTACTCAAATaGGTCAACATTCAATATGGA +
Preference number: 4 (lower is better)
Translates to: SDTVSLLAYSNGSTFNMDFSVLK*VNIQYG
Trigger: TCCATATTGAATGTTGACCCATTTGAGTACGCTAAA...GTCCATATTGAATGTTGACCCATTTGAGTACGCTAAAAGGCTTACAGTATCAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR CCA 90 bp CAGAAATACAAATCGAGTGGCACATACTTCCATTTTCTTCTTAGGCCAAAGGTTTTTAGCGTACTCAAATaGGTCAACATTCAATATGGA +
Preference number: 4 (lower is better)
Translates to: QKYKSSGTYFHFLLRPKVFSVLK*VNIQYG
Trigger: TCCATATTGAATGTTGACCCATTTGAGTACGCTAAA...AACCTTTGGCCTAAGAAGAAAATGGAAGTATGTGCCACTCGATTTGTATTTCTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR CCA 90 bp AGGGTGACATGCTCTGATAAATCCCATTTAAGGATGATTCTGTTCAGGCAAATACTGCCTTTACTAAAATaGCACTTTCGTTTACATCAA +
Preference number: 4 (lower is better)
Translates to: RVTCSDKSHLRMILFRQILPLLK*HFRLHQ
Trigger: TTGATGTAAACGAAAGTGCCATTTTAGTAAAGGCAG...TATTTGCCTGAACAGAATCATCCTTAAATGGGATTTATCAGAGCATGTCACCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR CCA 90 bp AATACAAATCGAGTGGCACATACTTCCATTTTCTTCTTAGGCCAAAGGTTTCAGCTGCCTTTACTAAAATaGCACTTTCGTTTACATCAA +
Preference number: 4 (lower is better)
Translates to: NTNRVAHTSIFFLGQRFQLPLLK*HFRLHQ
Trigger: TTGATGTAAACGAAAGTGCCATTTTAGTAAAGGCAG...CTGAAACCTTTGGCCTAAGAAGAAAATGGAAGTATGTGCCACTCGATTTGTATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR GCA 90 bp ATCTCTCACTGTTCATTATCAAAGTTACAAGATTGCATACCAATAGACAGACTGAAAATGAGCTTCAATTaGATCCTTAGATGGACAGTG +
Preference number: 4 (lower is better)
Translates to: ISHCSLSKLQDCIPIDRLKMSFN*ILRWTV
Trigger: CACTGTCCATCTAAGGATGCAATTGAAGCTCATTTT...CAGTCTGTCTATTGGTATGCAATCTTGTAACTTTGATAATGAACAGTGAGAGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR GCA 90 bp ACCCCTGTTTATTTGTTAATCAGAAATACAAATCGAGTGGCACATACTTCCATTAAAATGAGCTTCAATTaGATCCTTAGATGGACAGTG +
Preference number: 4 (lower is better)
Translates to: TPVYLLIRNTNRVAHTSIKMSFN*ILRWTV
Trigger: CACTGTCCATCTAAGGATGCAATTGAAGCTCATTTT...AATGGAAGTATGTGCCACTCGATTTGTATTTCTGATTAACAAATAAACAGGGGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR CCA 90 bp ATCTCTCACTGTTCATTATCAAAGTTACAAGATTGCATACCAATAGACAGACTGCAAAAGCAAATAGTATaGTTCTGCTTCCCTTTCAGT +
Preference number: 4 (lower is better)
Translates to: ISHCSLSKLQDCIPIDRLQKQIV*FCFPFS
Trigger: ACTGAAAGGGAAGCAGAACCATACTATTTGCTTTTG...CAGTCTGTCTATTGGTATGCAATCTTGTAACTTTGATAATGAACAGTGAGAGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343245.7
ENST00000369076.8
ENST00000646025.1
CDS-3UTR CCA 90 bp ACCCCTGTTTATTTGTTAATCAGAAATACAAATCGAGTGGCACATACTTCCATTAGGTGTTTCCAACATTaGCTCAATTCCATGAATCAT +
Preference number: 4 (lower is better)
Translates to: TPVYLLIRNTNRVAHTSIRCFQH*LNSMNH
Trigger: ATGATTCATGGAATTGAGCCAATGTTGGAAACACCT...AATGGAAGTATGTGCCACTCGATTTGTATTTCTGATTAACAAATAAACAGGGGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR CCA 90 bp GTGACATGCTCTGATAAATCCCATTTAAGGATGATTCTGTTCAGGCAAATAGTTTTTAGCGTACTCAAATaGGTCAACATTCAATATGGA +
Preference number: 4 (lower is better)
Translates to: VTCSDKSHLRMILFRQIVFSVLK*VNIQYG
Trigger: TCCATATTGAATGTTGACCCATTTGAGTACGCTAAA...AACTATTTGCCTGAACAGAATCATCCTTAAATGGGATTTATCAGAGCATGTCAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR CCA 90 bp ATCTCTCACTGTTCATTATCAAAGTTACAAGATTGCATACCAATAGACAGACTGCCATTCCAGAATATCTaGTCTTTGACCAACTTTATC +
Preference number: 4 (lower is better)
Translates to: ISHCSLSKLQDCIPIDRLPFQNI*SLTNFI
Trigger: GATAAAGTTGGTCAAAGACCAGATATTCTGGAATGG...CAGTCTGTCTATTGGTATGCAATCTTGTAACTTTGATAATGAACAGTGAGAGAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR CCA 90 bp ACCCCTGTTTATTTGTTAATCAGAAATACAAATCGAGTGGCACATACTTCCATTCCATTCCAGAATATCTaGTCTTTGACCAACTTTATC +
Preference number: 4 (lower is better)
Translates to: TPVYLLIRNTNRVAHTSIPFQNI*SLTNFI
Trigger: GATAAAGTTGGTCAAAGACCAGATATTCTGGAATGG...AATGGAAGTATGTGCCACTCGATTTGTATTTCTGATTAACAAATAAACAGGGGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR GCA 90 bp TCTGATAAATCCCATTTAAGGATGATTCTGTTCAGGCAAATAGTTGATCCTTCAGTTTCTGAGATTGTATaGTGTACTGGCTATTCTTTT +
Preference number: 4 (lower is better)
Translates to: SDKSHLRMILFRQIVDPSVSEIV*CTGYSF
Trigger: AAAAGAATAGCCAGTACAGCATACAATCTCAGAAAC...TGAAGGATCAACTATTTGCCTGAACAGAATCATCCTTAAATGGGATTTATCAGA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360666.6
ENST00000369070.5
CDS-3UTR CCA 90 bp ATCTCTCACTGTTCATTATCAAAGTTACAAGATTGCATACCAATAGACAGACTGGAAATACAAATCGAGTaGCACATACTTCCATTTTCT +
Preference number: 4 (lower is better)
Translates to: ISHCSLSKLQDCIPIDRLEIQIE*HILPFS
Trigger: AGAAAATGGAAGTATGTGCCACTCGATTTGTATTTC...CAGTCTGTCTATTGGTATGCAATCTTGTAACTTTGATAATGAACAGTGAGAGAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR CCA 90 bp TACCCCTGTTTATTTGTTAATCAGAAATACAAATCGAGTGGCACATACTTCCATCTGCCTTTACTAAAATaGCACTTTCGTTTACATCAA +
Preference number: 4 (lower is better)
Translates to: YPCLFVNQKYKSSGTYFHLPLLK*HFRLHQ
Trigger: TTGATGTAAACGAAAGTGCCATTTTAGTAAAGGCAG...ATGGAAGTATGTGCCACTCGATTTGTATTTCTGATTAACAAATAAACAGGGGTA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS TCA 90 bp GGAAGCCCGCGCAGCCGCAAAAAGCACCGGCGCGGAGGTCGGAGCTaGACCCTGCTGCACTTCCGCCCTCTGGTATCCAGCGAATACAAC +
Preference number: 5 (lower is better)
Translates to: GSPRSRKKHRRGGRS*TLLHFRPLVSSEYN
Trigger: GTTGTATTCGCTGGATACCAGAGGGCGGAAGTGCAGCAGGGTTCAGCTCCGACCTCCGCGCCGGTGCTTTTTGCGGCTGCGCGGGCTTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369070.5
ENST00000369076.8
ENST00000636437.1
ENST00000646025.1
CDS GCA 90 bp CGCGCAGCCGCAAAAAGCACCGGCGCGGAGGTCGGAGCTGAACCCTaGTGCACTTCCGCCCTCTGGTATCCAGCGAATACAACCGGCAAC +
Preference number: 5 (lower is better)
Translates to: RAAAKSTGAEVGAEP*CTSALWYPANTTGN
Trigger: GTTGCCGGTTGTATTCGCTGGATACCAGAGGGCGGAAGTGCAGCAGGGTTCAGCTCCGACCTCCGCGCCGGTGCTTTTTGCGGCTGCGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369070.5
ENST00000369076.8
ENST00000636437.1
ENST00000646025.1
CDS GCA 90 bp GCAGCCGCAAAAAGCACCGGCGCGGAGGTCGGAGCTGAACCCTGCTaGACTTCCGCCCTCTGGTATCCAGCGAATACAACCGGCAACGCT +
Preference number: 5 (lower is better)
Translates to: AAAKSTGAEVGAEPC*TSALWYPANTTGNA
Trigger: AGCGTTGCCGGTTGTATTCGCTGGATACCAGAGGGCGGAAGTGCAGCAGGGTTCAGCTCCGACCTCCGCGCCGGTGCTTTTTGCGGCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369070.5
ENST00000369076.8
ENST00000636437.1
ENST00000646025.1
CDS-3UTR CAA 90 bp AGTTCTGCTCAGGGGCAGCCCTTTCAGAGGTCCCGAGGAAGTTTCCAGGCGGCTCCCCTGTTGCAGTCATaGGTCATGACCACCGACACA +
Preference number: 5 (lower is better)
Translates to: SSAQGQPFQRSRGSFQAAPLLQS*VMTTDT
Trigger: TGTGTCGGTGGTCATGACCAATGACTGCAACAGGGG...AGCCGCCTGGAAACTTCCTCGGGACCTCTGAAAGGGCTGCCCCTGAGCAGAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636437.1
CDS-3UTR CAA 90 bp CTCAGGGGCAGCCCTTTCAGAGGTCCCGAGGAAGTTTCCAGGCGGCTTGAGTGGTCCATGAGTTTCCGATaGATGGCCCAAAACTGGTCA +
Preference number: 5 (lower is better)
Translates to: LRGSPFRGPEEVSRRLEWSMSFR*MAQNWS
Trigger: TGACCAGTTTTGGGCCATCAATCGGAAACTCATGGA...CCACTCAAGCCGCCTGGAAACTTCCTCGGGACCTCTGAAAGGGCTGCCCCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636335.1
ENST00000636437.1
CDS-3UTR CAA 90 bp GGGGCAGCCCTTTCAGAGGTCCCGAGGAAGTTTCCAGGCGGCTTGAGTGGAAAATTCCTGATAGGGCTGTaGACACAGGCCTCTTGTGAA +
Preference number: 5 (lower is better)
Translates to: GAALSEVPRKFPGGLSGKFLIGL*TQASCE
Trigger: TTCACAAGAGGCCTGTGTCAACAGCCCTATCAGGAA...TTTTCCACTCAAGCCGCCTGGAAACTTCCTCGGGACCTCTGAAAGGGCTGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636335.1
ENST00000636437.1
CDS-3UTR CAA 90 bp CTGTTGCAGTCATTGGTCATGACCACCGACACACCGGCAGGAAGGAGACAAAGGAGCTGGGGAGGTGTCTaGTCTTCCTCTTTGACAGCT +
Preference number: 5 (lower is better)
Translates to: LLQSLVMTTDTPAGRRQRSWGGV*SSSLTA
Trigger: AGCTGTCAAAGAGGAAGACAAGACACCTCCCCAGCT...CCTTTGTCTCCTTCCTGCCGGTGTGTCGGTGGTCATGACCAATGACTGCAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636437.1
CDS-3UTR CAA 90 bp TGCTCAGGGGCAGCCCTTTCAGAGGTCCCGAGGAAGTTTCCAGGCGGCTTGAGTGTCAAATCTGTCATTTaGCAATCCCATCCAGAGTTG +
Preference number: 5 (lower is better)
Translates to: CSGAALSEVPRKFPGGLSVKSVI*QSHPEL
Trigger: CAACTCTGGATGGGATTGCAAAATGACAGATTTGAC...ACTCAAGCCGCCTGGAAACTTCCTCGGGACCTCTGAAAGGGCTGCCCCTGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636335.1
ENST00000636437.1
CDS CCA 90 bp GGCAGCCCTTTCAGAGGTCCCGAGGAAGTTTCCAGGCGGCTTGAGTaGAAAAGTGAGTATTTCATCACCAGTGCGAGAGTCTTAGTCTTC +
Preference number: 5 (lower is better)
Translates to: GSPFRGPEEVSRRLE*KSEYFITSARVLVF
Trigger: GAAGACTAAGACTCTCGCACTGGTGATGAAATACTCACTTTTCCACTCAAGCCGCCTGGAAACTTCCTCGGGACCTCTGAAAGGGCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636437.1
CDS-3UTR CAA 90 bp AAAGTAAGACCAGCCCAGTTGCCTTATCTGACATGGAATCTTTTTCCTGTCTGGCTCGCCAACTCCACCTaGCCCGGAGGAACCACCTTC +
Preference number: 5 (lower is better)
Translates to: KVRPAQLPYLTWNLFPVWLANST*PGGTTF
Trigger: GAAGGTGGTTCCTCCGGGCAAGGTGGAGTTGGCGAG...CCAGACAGGAAAAAGATTCCATGTCAGATAAGGCAACTGGGCTGGTCTTACTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343245.7
CDS-3UTR CAA 90 bp CTGTCTGGCTTGCAGCAGCGAAGTGTTTCTGGTCAGGTTGCCTCCACCAAACCTTTTTTCCTGTCTGGCTaGCAGCAGCGAAGTGTTTCT +
Preference number: 5 (lower is better)
Translates to: LSGLQQRSVSGQVASTKPFFLSG*QQRSVS
Trigger: AGAAACACTTCGCTGCTGCAAGCCAGACAGGAAAAA...AGGTTTGGTGGAGGCAACCTGACCAGAAACACTTCGCTGCTGCAAGCCAGACAG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR CAA 90 bp CTGTCTGGCTTGCAGCAGCGAAGTGTTTCTGGTCAGGTTGCCTCCACCAAACCTGAAGGACAAACTTCTTaGAGGAGATCTCCTAGTGTG +
Preference number: 5 (lower is better)
Translates to: LSGLQQRSVSGQVASTKPEGQTS*RRSPSV
Trigger: CACACTAGGAGATCTCCTCAAAGAAGTTTGTCCTTC...AGGTTTGGTGGAGGCAACCTGACCAGAAACACTTCGCTGCTGCAAGCCAGACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR CAA 90 bp TGGCAGTGGAGGAAAGCAGAGGTGATGCAAAGTAAGACCAGCCCAGTTGCCTTAGTGTTTCTGGTCAGGTaGCCTCCACCAAACCTGATT +
Preference number: 5 (lower is better)
Translates to: WQWRKAEVMQSKTSPVALVFLVR*PPPNLI
Trigger: AATCAGGTTTGGTGGAGGCAACCTGACCAGAAACAC...TAAGGCAACTGGGCTGGTCTTACTTTGCATCACCTCTGCTTTCCTCCACTGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR CAA 90 bp CTGTCTGGCTTGCAGCAGCGAAGTGTTTCTGGTCAGGTTGCCTCCACCAAACCTTCTCGAAGCACATCTTaGTCATCTGTCATTCTTCCA +
Preference number: 5 (lower is better)
Translates to: LSGLQQRSVSGQVASTKPSRSTS*SSVILP
Trigger: TGGAAGAATGACAGATGACAAAGATGTGCTTCGAGA...AGGTTTGGTGGAGGCAACCTGACCAGAAACACTTCGCTGCTGCAAGCCAGACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR CAA 90 bp ATTGGTCATGACCACCGACACACCGGCAGGAAGGAGACAAAGGCTGTGTCATGTGAAGGACAAACTTCTTaGAGGAGATCTCCTAGTGTG +
Preference number: 5 (lower is better)
Translates to: IGHDHRHTGRKETKAVSCEGQTS*RRSPSV
Trigger: CACACTAGGAGATCTCCTCAAAGAAGTTTGTCCTTC...ACATGACACAGCCTTTGTCTCCTTCCTGCCGGTGTGTCGGTGGTCATGACCAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636437.1
CDS-3UTR CAA 90 bp CTGTCTGGCTTGCAGCAGCGAAGTGTTTCTGGTCAGGTTGCCTCCACCAAACCTTGCATTCTGATCCTTTaGCTCACTAAAGCTCACTTC +
Preference number: 5 (lower is better)
Translates to: LSGLQQRSVSGQVASTKPCILIL*LTKAHF
Trigger: GAAGTGAGCTTTAGTGAGCAAAAGGATCAGAATGCA...AGGTTTGGTGGAGGCAACCTGACCAGAAACACTTCGCTGCTGCAAGCCAGACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR CAA 90 bp TTCAGAGGTCCCGAGGAAGTTTCCAGGCGGCTTGAGTGGAAAAGTGAGTATTTCTTCCTGATAGGGCTGTaGACACAGGCCTCTTGTGAA +
Preference number: 5 (lower is better)
Translates to: FRGPEEVSRRLEWKSEYFFLIGL*TQASCE
Trigger: TTCACAAGAGGCCTGTGTCAACAGCCCTATCAGGAA...GAAATACTCACTTTTCCACTCAAGCCGCCTGGAAACTTCCTCGGGACCTCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636335.1
ENST00000636437.1
CDS-3UTR CAA 90 bp TCAGAGGTCCCGAGGAAGTTTCCAGGCGGCTTGAGTGGAAAAGTGAGTATTTCACCCTTGGCTGGGCTTTaGCAGTTGTGTTTACACCAA +
Preference number: 5 (lower is better)
Translates to: SEVPRKFPGGLSGKVSISPLAGL*QLCLHQ
Trigger: TTGGTGTAAACACAACTGCAAAAGCCCAGCCAAGGG...TGAAATACTCACTTTTCCACTCAAGCCGCCTGGAAACTTCCTCGGGACCTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636335.1
CDS TCA 90 bp AGTGTGTGCAACTGTCCATCTGCAGCCACAGGACGAAACAGCTTCTaGATGAAAGGTCTTTCAGTCGTTGTATTGTGGACTCACTGCGTC +
Preference number: 5 (lower is better)
Translates to: SVCNCPSAATGRNSF*MKGLSVVVLWTHCV
Trigger: GACGCAGTGAGTCCACAATACAACGACTGAAAGACCTTTCATTCAGAAGCTGTTTCGTCCTGTGGCTGCAGATGGACAGTTGCACACACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646025.1
CDS-3UTR CAA 90 bp CTGTCTGGCTTGCAGCAGCGAAGTGTTTCTGGTCAGGTTGCCTCCACCAAACCTATGAAAAACACTAGCTaGGAAGGAATGGGTTTTTCC +
Preference number: 5 (lower is better)
Translates to: LSGLQQRSVSGQVASTKPMKNTS*EGMGFS
Trigger: GGAAAAACCCATTCCTTCCAAGCTAGTGTTTTTCAT...AGGTTTGGTGGAGGCAACCTGACCAGAAACACTTCGCTGCTGCAAGCCAGACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR CAA 90 bp ATTGGTCATGACCACCGACACACCGGCAGGAAGGAGACAAAGGCTGTGTCATGTGGTGATCAAAGCAACTaGTCTTTCATTTCCATGGAG +
Preference number: 5 (lower is better)
Translates to: IGHDHRHTGRKETKAVSCGDQSN*SFISME
Trigger: CTCCATGGAAATGAAAGACAAGTTGCTTTGATCACC...ACATGACACAGCCTTTGTCTCCTTCCTGCCGGTGTGTCGGTGGTCATGACCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636437.1
CDS-3UTR CAA 90 bp AGACAAAGGCTGTGTCATGTGATCTTCCTGATAGGGCTGTTGACACAGGCCTCTAGAAGAAGGAGGTGGTaGGTCTCCAAGGTGATCAAA +
Preference number: 5 (lower is better)
Translates to: RQRLCHVIFLIGLLTQASRRRRW*VSKVIK
Trigger: TTTGATCACCTTGGAGACCAACCACCTCCTTCTTCT...AGAGGCCTGTGTCAACAGCCCTATCAGGAAGATCACATGACACAGCCTTTGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636437.1
CDS-3UTR CAA 90 bp TGGCAGTGGAGGAAAGCAGAGGTGATGCAAAGTAAGACCAGCCCAGTTGCCTTAGTCAAATCTGTCATTTaGCAATCCCATCCAGAGTTG +
Preference number: 5 (lower is better)
Translates to: WQWRKAEVMQSKTSPVALVKSVI*QSHPEL
Trigger: CAACTCTGGATGGGATTGCAAAATGACAGATTTGAC...TAAGGCAACTGGGCTGGTCTTACTTTGCATCACCTCTGCTTTCCTCCACTGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR CAA 90 bp CTGGCTGCCAGGGACCACAGTGAAAAATTAGACCTGGAGCCAATGAAAAACACTTCCATGAGTTTCCGATaGATGGCCCAAAACTGGTCA +
Preference number: 5 (lower is better)
Translates to: LAARDHSEKLDLEPMKNTSMSFR*MAQNWS
Trigger: TGACCAGTTTTGGGCCATCAATCGGAAACTCATGGA...AGTGTTTTTCATTGGCTCCAGGTCTAATTTTTCACTGTGGTCCCTGGCAGCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR CAA 90 bp AGCGAAGTGTTTCTGGTCAGGTTGCCTCCACCAAACCTGATTGAAGCAAAAGGGGAAGGACAAACTTCTTaGAGGAGATCTCCTAGTGTG +
Preference number: 5 (lower is better)
Translates to: SEVFLVRLPPPNLIEAKGEGQTS*RRSPSV
Trigger: CACACTAGGAGATCTCCTCAAAGAAGTTTGTCCTTC...CCCTTTTGCTTCAATCAGGTTTGGTGGAGGCAACCTGACCAGAAACACTTCGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR CAA 90 bp AAAGCAGAGGTGATGCAAAGTAAGACCAGCCCAGTTGCCTTATCTGACATGGAAGTGTTTCTGGTCAGGTaGCCTCCACCAAACCTGATT +
Preference number: 5 (lower is better)
Translates to: KAEVMQSKTSPVALSDMEVFLVR*PPPNLI
Trigger: AATCAGGTTTGGTGGAGGCAACCTGACCAGAAACAC...TTCCATGTCAGATAAGGCAACTGGGCTGGTCTTACTTTGCATCACCTCTGCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR CAA 90 bp CTGGCTGCCAGGGACCACAGTGAAAAATTAGACCTGGAGCCAATGAAAAACACTTTTTTCCTGTCTGGCTaGCAGCAGCGAAGTGTTTCT +
Preference number: 5 (lower is better)
Translates to: LAARDHSEKLDLEPMKNTFFLSG*QQRSVS
Trigger: AGAAACACTTCGCTGCTGCAAGCCAGACAGGAAAAA...AGTGTTTTTCATTGGCTCCAGGTCTAATTTTTCACTGTGGTCCCTGGCAGCCAG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR CAA 90 bp TGGCAGTGGAGGAAAGCAGAGGTGATGCAAAGTAAGACCAGCCCAGTTGCCTTATGCATTCTGATCCTTTaGCTCACTAAAGCTCACTTC +
Preference number: 5 (lower is better)
Translates to: WQWRKAEVMQSKTSPVALCILIL*LTKAHF
Trigger: GAAGTGAGCTTTAGTGAGCAAAAGGATCAGAATGCA...TAAGGCAACTGGGCTGGTCTTACTTTGCATCACCTCTGCTTTCCTCCACTGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR CAA 90 bp TTCCCCACCAAGGTTCATGAGATAGATGCAGAGCCTACTCCGTATCCTCATGGGGAGGTAAGAATATCTTaGTGCTTCAGTCTGATTGGG +
Preference number: 5 (lower is better)
Translates to: FPTKVHEIDAEPTPYPHGEVRIS*CFSLIG
Trigger: CCCAATCAGACTGAAGCACAAAGATATTCTTACCTC...CCCATGAGGATACGGAGTAGGCTCTGCATCTATCTCATGAACCTTGGTGGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636437.1
CDS-3UTR CAA 90 bp AGCGAAGTGTTTCTGGTCAGGTTGCCTCCACCAAACCTGATTGAAGCAAAAGGGGTCAAATCTGTCATTTaGCAATCCCATCCAGAGTTG +
Preference number: 5 (lower is better)
Translates to: SEVFLVRLPPPNLIEAKGVKSVI*QSHPEL
Trigger: CAACTCTGGATGGGATTGCAAAATGACAGATTTGAC...CCCTTTTGCTTCAATCAGGTTTGGTGGAGGCAACCTGACCAGAAACACTTCGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR CAA 90 bp TTCAGAGGTCCCGAGGAAGTTTCCAGGCGGCTTGAGTGGAAAAGTGAGTATTTCGTCAAATCTGTCATTTaGCAATCCCATCCAGAGTTG +
Preference number: 5 (lower is better)
Translates to: FRGPEEVSRRLEWKSEYFVKSVI*QSHPEL
Trigger: CAACTCTGGATGGGATTGCAAAATGACAGATTTGAC...GAAATACTCACTTTTCCACTCAAGCCGCCTGGAAACTTCCTCGGGACCTCTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636335.1
ENST00000636437.1
CDS-3UTR CAA 90 bp AAAGCAGAGGTGATGCAAAGTAAGACCAGCCCAGTTGCCTTATCTGACATGGAATCCATGAGTTTCCGATaGATGGCCCAAAACTGGTCA +
Preference number: 5 (lower is better)
Translates to: KAEVMQSKTSPVALSDMESMSFR*MAQNWS
Trigger: TGACCAGTTTTGGGCCATCAATCGGAAACTCATGGA...TTCCATGTCAGATAAGGCAACTGGGCTGGTCTTACTTTGCATCACCTCTGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR CAA 90 bp CATGTGATCTTCCTGATAGGGCTGTTGACACAGGCCTCTTGTGAAGATCCACATGAAGGACAAACTTCTTaGAGGAGATCTCCTAGTGTG +
Preference number: 5 (lower is better)
Translates to: HVIFLIGLLTQASCEDPHEGQTS*RRSPSV
Trigger: CACACTAGGAGATCTCCTCAAAGAAGTTTGTCCTTC...ATGTGGATCTTCACAAGAGGCCTGTGTCAACAGCCCTATCAGGAAGATCACATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636335.1
ENST00000636437.1
CDS-3UTR CAA 90 bp AAAGTAAGACCAGCCCAGTTGCCTTATCTGACATGGAATCTTTTTCCTGTCTGGGTGTTTCTGGTCAGGTaGCCTCCACCAAACCTGATT +
Preference number: 5 (lower is better)
Translates to: KVRPAQLPYLTWNLFPVWVFLVR*PPPNLI
Trigger: AATCAGGTTTGGTGGAGGCAACCTGACCAGAAACAC...CCAGACAGGAAAAAGATTCCATGTCAGATAAGGCAACTGGGCTGGTCTTACTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR CAA 90 bp CATGTGATCTTCCTGATAGGGCTGTTGACACAGGCCTCTTGTGAAGATCCACATAAGTTTCCAGGCGGCTaGAGTGGAAAAGTGAGTATT +
Preference number: 5 (lower is better)
Translates to: HVIFLIGLLTQASCEDPHKFPGG*SGKVSI
Trigger: AATACTCACTTTTCCACTCAAGCCGCCTGGAAACTT...ATGTGGATCTTCACAAGAGGCCTGTGTCAACAGCCCTATCAGGAAGATCACATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636335.1
ENST00000636437.1
CDS-3UTR CAA 90 bp AAGTTTCCAGGCGGCTTGAGTGGAAAAGTGAGTATTTCATCACCAGTGCGAGAGGCTGGGCTTTTGCAGTaGTGTTTACACCAACTCATA +
Preference number: 5 (lower is better)
Translates to: KFPGGLSGKVSISSPVREAGLLQ*CLHQLI
Trigger: TATGAGTTGGTGTAAACACAACTGCAAAAGCCCAGC...CTCTCGCACTGGTGATGAAATACTCACTTTTCCACTCAAGCCGCCTGGAAACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636335.1
CDS-3UTR CAA 90 bp TCCCCATCTTCAGGATCAATAGCAGAAGGACAAACTTCTTTGAGGAGATCTCCTTTCTTCCTCACTAGCTaGGAACCTCTGGATTCCCAC +
Preference number: 5 (lower is better)
Translates to: SPSSGSIAEGQTSLRRSPFFLTS*EPLDSH
Trigger: GTGGGAATCCAGAGGTTCCAAGCTAGTGAGGAAGAA...AGGAGATCTCCTCAAAGAAGTTTGTCCTTCTGCTATTGATCCTGAAGATGGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646025.1
CDS-3UTR CAA 90 bp TTGAGGAGATCTCCTAGTGTGTGCAACTGTCCATCTGCAGCCACAGGACGAAACAAGTGCTTTTTCACTTaGTCAGTTACCAACGTCAAA +
Preference number: 5 (lower is better)
Translates to: LRRSPSVCNCPSAATGRNKCFFT*SVTNVK
Trigger: TTTGACGTTGGTAACTGACAAAGTGAAAAAGCACTT...GTTTCGTCCTGTGGCTGCAGATGGACAGTTGCACACACTAGGAGATCTCCTCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000613993.1
ENST00000646025.1
CDS-3UTR CAA 90 bp CCACTGCAGAGGTGTTTCCAACATTGGCTCAATTCCATGAATCATCACTTGATTCTTTCAGTCGTTGTATaGTGGACTCACTGCGTCCAC +
Preference number: 5 (lower is better)
Translates to: PLQRCFQHWLNSMNHHLILSVVV*WTHCVH
Trigger: GTGGACGCAGTGAGTCCACAATACAACGACTGAAAG...AATCAAGTGATGATTCATGGAATTGAGCCAATGTTGGAAACACCTCTGCAGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646025.1
CDS-3UTR CAA 90 bp AGCGAAGTGTTTCTGGTCAGGTTGCCTCCACCAAACCTGATTGAAGCAAAAGGGCAAATAGCAAACCAATaGGATAATGCCATTTCAGTG +
Preference number: 5 (lower is better)
Translates to: SEVFLVRLPPPNLIEAKGQIANQ*DNAISV
Trigger: CACTGAAATGGCATTATCCAATTGGTTTGCTATTTG...CCCTTTTGCTTCAATCAGGTTTGGTGGAGGCAACCTGACCAGAAACACTTCGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343245.7
ENST00000369076.8
ENST00000646025.1
CDS-3UTR CAA 90 bp ATGAGTTTCCGATTGATGGCCCAAAACTGGTCAAATCTGTCATTTTGCAATCCCTCCATGAGTTTCCGATaGATGGCCCAAAACTGGTCA +
Preference number: 5 (lower is better)
Translates to: MSFRLMAQNWSNLSFCNPSMSFR*MAQNWS
Trigger: TGACCAGTTTTGGGCCATCAATCGGAAACTCATGGA...GGGATTGCAAAATGACAGATTTGACCAGTTTTGGGCCATCAATCGGAAACTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369070.5
CDS-3UTR CAA 90 bp CCACTGCAGAGGTGTTTCCAACATTGGCTCAATTCCATGAATCATCACTTGATTTCCATGAGTTTCCGATaGATGGCCCAAAACTGGTCA +
Preference number: 5 (lower is better)
Translates to: PLQRCFQHWLNSMNHHLISMSFR*MAQNWS
Trigger: TGACCAGTTTTGGGCCATCAATCGGAAACTCATGGA...AATCAAGTGATGATTCATGGAATTGAGCCAATGTTGGAAACACCTCTGCAGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360666.6
ENST00000369070.5
ENST00000646025.1
CDS-3UTR CAA 90 bp TCAGGATCAATAGCAGAAGGACAAACTTCTTTGAGGAGATCTCCTAGTGTGTGCGAAGGACAAACTTCTTaGAGGAGATCTCCTAGTGTG +
Preference number: 5 (lower is better)
Translates to: SGSIAEGQTSLRRSPSVCEGQTS*RRSPSV
Trigger: CACACTAGGAGATCTCCTCAAAGAAGTTTGTCCTTC...GCACACACTAGGAGATCTCCTCAAAGAAGTTTGTCCTTCTGCTATTGATCCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369070.5
ENST00000613993.1
ENST00000646025.1
CDS-3UTR CAA 90 bp GAAGACCTTCAGTGGTCCGGTAAGTCTTTCATGTCACAGCTGAGGTTTAATGATGAAGGACAAACTTCTTaGAGGAGATCTCCTAGTGTG +
Preference number: 5 (lower is better)
Translates to: EDLQWSGKSFMSQLRFNDEGQTS*RRSPSV
Trigger: CACACTAGGAGATCTCCTCAAAGAAGTTTGTCCTTC...ATCATTAAACCTCAGCTGTGACATGAAAGACTTACCGGACCACTGAAGGTCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR CAA 90 bp GATACTGTAAGCCTTTTAGCGTACTCAAATGGGTCAACATTCAATATGGACAGCGTGTTTCTGGTCAGGTaGCCTCCACCAAACCTGATT +
Preference number: 5 (lower is better)
Translates to: DTVSLLAYSNGSTFNMDSVFLVR*PPPNLI
Trigger: AATCAGGTTTGGTGGAGGCAACCTGACCAGAAACAC...GCTGTCCATATTGAATGTTGACCCATTTGAGTACGCTAAAAGGCTTACAGTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR CAA 90 bp CCACTGCAGAGGTGTTTCCAACATTGGCTCAATTCCATGAATCATCACTTGATTTTTTTCCTGTCTGGCTaGCAGCAGCGAAGTGTTTCT +
Preference number: 5 (lower is better)
Translates to: PLQRCFQHWLNSMNHHLIFFLSG*QQRSVS
Trigger: AGAAACACTTCGCTGCTGCAAGCCAGACAGGAAAAA...AATCAAGTGATGATTCATGGAATTGAGCCAATGTTGGAAACACCTCTGCAGTGG
44% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000360666.6
ENST00000369070.5
ENST00000646025.1
CDS-3UTR CAA 90 bp AGCGAAGTGTTTCTGGTCAGGTTGCCTCCACCAAACCTGATTGAAGCAAAAGGGAATGCACAAATATGTTaGACTGGTAAAATCCCAGAG +
Preference number: 5 (lower is better)
Translates to: SEVFLVRLPPPNLIEAKGNAQIC*TGKIPE
Trigger: CTCTGGGATTTTACCAGTCAAACATATTTGTGCATT...CCCTTTTGCTTCAATCAGGTTTGGTGGAGGCAACCTGACCAGAAACACTTCGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR CAA 90 bp TCAGGATCAATAGCAGAAGGACAAACTTCTTTGAGGAGATCTCCTAGTGTGTGCTCAGTCGTTGTCATTTaGCAATCCCATCCAGAGTTG +
Preference number: 5 (lower is better)
Translates to: SGSIAEGQTSLRRSPSVCSVVVI*QSHPEL
Trigger: CAACTCTGGATGGGATTGCAAAATGACAACGACTGA...GCACACACTAGGAGATCTCCTCAAAGAAGTTTGTCCTTCTGCTATTGATCCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613993.1
CDS-3UTR CAA 90 bp GAAGACCTTCAGTGGTCCGGTAAGTCTTTCATGTCACAGCTGAGGTTTAATGATTCTCGAAGCACATCTTaGTCATCTGTCATTCTTCCA +
Preference number: 5 (lower is better)
Translates to: EDLQWSGKSFMSQLRFNDSRSTS*SSVILP
Trigger: TGGAAGAATGACAGATGACAAAGATGTGCTTCGAGA...ATCATTAAACCTCAGCTGTGACATGAAAGACTTACCGGACCACTGAAGGTCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR CAA 90 bp AAAGTAAGACCAGCCCAGTTGCCTTATCTGACATGGAATCTTTTTCCTGTCTGGTCTCGAAGCACATCTTaGTCATCTGTCATTCTTCCA +
Preference number: 5 (lower is better)
Translates to: KVRPAQLPYLTWNLFPVWSRSTS*SSVILP
Trigger: TGGAAGAATGACAGATGACAAAGATGTGCTTCGAGA...CCAGACAGGAAAAAGATTCCATGTCAGATAAGGCAACTGGGCTGGTCTTACTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR CAA 90 bp TCAAATCTAGATCAGAAGTTCACTCAAGCCTACTGCAAAGGCCTGACACTGGTTGTCAAATCTGTCATTTaGCAATCCCATCCAGAGTTG +
Preference number: 5 (lower is better)
Translates to: SNLDQKFTQAYCKGLTLVVKSVI*QSHPEL
Trigger: CAACTCTGGATGGGATTGCAAAATGACAGATTTGAC...AACCAGTGTCAGGCCTTTGCAGTAGGCTTGAGTGAACTTCTGATCTAGATTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343245.7
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR CAA 90 bp AAAGTAAGACCAGCCCAGTTGCCTTATCTGACATGGAATCTTTTTCCTGTCTGGGTCAAATCTGTCATTTaGCAATCCCATCCAGAGTTG +
Preference number: 5 (lower is better)
Translates to: KVRPAQLPYLTWNLFPVWVKSVI*QSHPEL
Trigger: CAACTCTGGATGGGATTGCAAAATGACAGATTTGAC...CCAGACAGGAAAAAGATTCCATGTCAGATAAGGCAACTGGGCTGGTCTTACTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR CAA 90 bp AAAAGGGTGACATGCTCTGATAAATCCCATTTAAGGATGATTCTGTTCAGGCAAGTGTTTCTGGTCAGGTaGCCTCCACCAAACCTGATT +
Preference number: 5 (lower is better)
Translates to: KRVTCSDKSHLRMILFRQVFLVR*PPPNLI
Trigger: AATCAGGTTTGGTGGAGGCAACCTGACCAGAAACAC...TTGCCTGAACAGAATCATCCTTAAATGGGATTTATCAGAGCATGTCACCCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR CAA 90 bp TCAGGATCAATAGCAGAAGGACAAACTTCTTTGAGGAGATCTCCTAGTGTGTGCAAGGTCTTTCAGTCGTaGTCATTTTGCAATCCCATC +
Preference number: 5 (lower is better)
Translates to: SGSIAEGQTSLRRSPSVCKVFQS*SFCNPI
Trigger: GATGGGATTGCAAAATGACAACGACTGAAAGACCTT...GCACACACTAGGAGATCTCCTCAAAGAAGTTTGTCCTTCTGCTATTGATCCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613993.1
CDS-3UTR CAA 90 bp GAGGAAAAGATGTCCTTCATACTTCTTAGCTGTTTCACTCCTGGAAGACATAAACATTTTCTGATGCCCTaGGCTGGGCTTTTGCAGTTG +
Preference number: 5 (lower is better)
Translates to: EEKMSFILLSCFTPGRHKHFLMP*AGLLQL
Trigger: CAACTGCAAAAGCCCAGCCAAGGGCATCAGAAAATG...TTTATGTCTTCCAGGAGTGAAACAGCTAAGAAGTATGAAGGACATCTTTTCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000636335.1
CDS-3UTR CAA 90 bp TACCCCTGTTTATTTGTTAATCAGAAATACAAATCGAGTGGCACATACTTCCATCACTGCGTCCACTGTTaGCGAGCTTTTCCAGAACGC +
Preference number: 5 (lower is better)
Translates to: YPCLFVNQKYKSSGTYFHHCVHC*RAFPER
Trigger: GCGTTCTGGAAAAGCTCGCAAACAGTGGACGCAGTG...ATGGAAGTATGTGCCACTCGATTTGTATTTCTGATTAACAAATAAACAGGGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646025.1
CDS-3UTR CAA 90 bp AAAGCAGAGGTGATGCAAAGTAAGACCAGCCCAGTTGCCTTATCTGACATGGAACTCACTAATGTCTTCTaGTCTCATAACCTTCTGAAA +
Preference number: 5 (lower is better)
Translates to: KAEVMQSKTSPVALSDMELTNVF*SHNLLK
Trigger: TTTCAGAAGGTTATGAGACAAGAAGACATTAGTGAG...TTCCATGTCAGATAAGGCAACTGGGCTGGTCTTACTTTGCATCACCTCTGCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343245.7
ENST00000369076.8
ENST00000646025.1
CDS-3UTR CAA 90 bp CTTCAGTGGTCCGGTAAGTCTTTCATGTCACAGCTGAGGTTTAATGATGGCAGTCAAATAGCAAACCAATaGGATAATGCCATTTCAGTG +
Preference number: 5 (lower is better)
Translates to: LQWSGKSFMSQLRFNDGSQIANQ*DNAISV
Trigger: CACTGAAATGGCATTATCCAATTGGTTTGCTATTTG...ACTGCCATCATTAAACCTCAGCTGTGACATGAAAGACTTACCGGACCACTGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343245.7
ENST00000369076.8
ENST00000646025.1
CDS-3UTR CAA 90 bp GCTTCATTATATTTTACAGAAGACCTTCAGTGGTCCGGTAAGTCTTTCATGTCATCCATGAGTTTCCGATaGATGGCCCAAAACTGGTCA +
Preference number: 5 (lower is better)
Translates to: ASLYFTEDLQWSGKSFMSSMSFR*MAQNWS
Trigger: TGACCAGTTTTGGGCCATCAATCGGAAACTCATGGA...TGACATGAAAGACTTACCGGACCACTGAAGGTCTTCTGTAAAATATAATGAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR CAA 90 bp CTTGAGTGGAAAAGTGAGTATTTCATCACCAGTGCGAGAGTCTTAGTTATCAATTCCATGAGTTTCCGATaGATGGCCCAAAACTGGTCA +
Preference number: 5 (lower is better)
Translates to: LEWKSEYFITSARVLVINSMSFR*MAQNWS
Trigger: TGACCAGTTTTGGGCCATCAATCGGAAACTCATGGA...ATTGATAACTAAGACTCTCGCACTGGTGATGAAATACTCACTTTTCCACTCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636335.1
CDS-3UTR CAA 90 bp CAGAAATACAAATCGAGTGGCACATACTTCCATTTTCTTCTTAGGCCAAAGGTTTTTTTCCTGTCTGGCTaGCAGCAGCGAAGTGTTTCT +
Preference number: 5 (lower is better)
Translates to: QKYKSSGTYFHFLLRPKVFFLSG*QQRSVS
Trigger: AGAAACACTTCGCTGCTGCAAGCCAGACAGGAAAAA...AACCTTTGGCCTAAGAAGAAAATGGAAGTATGTGCCACTCGATTTGTATTTCTG
42% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR CAA 90 bp CAGAAATACAAATCGAGTGGCACATACTTCCATTTTCTTCTTAGGCCAAAGGTTGTAAGACCAGCCCAGTaGCCTTATCTGACATGGAAT +
Preference number: 5 (lower is better)
Translates to: QKYKSSGTYFHFLLRPKVVRPAQ*PYLTWN
Trigger: ATTCCATGTCAGATAAGGCAACTGGGCTGGTCTTAC...AACCTTTGGCCTAAGAAGAAAATGGAAGTATGTGCCACTCGATTTGTATTTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR CAA 90 bp TATTTTACAGAAGACCTTCAGTGGTCCGGTAAGTCTTTCATGTCACAGCTGAGGATGAAAAACACTAGCTaGGAAGGAATGGGTTTTTCC +
Preference number: 5 (lower is better)
Translates to: YFTEDLQWSGKSFMSQLRMKNTS*EGMGFS
Trigger: GGAAAAACCCATTCCTTCCAAGCTAGTGTTTTTCAT...CCTCAGCTGTGACATGAAAGACTTACCGGACCACTGAAGGTCTTCTGTAAAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR CAA 90 bp ATGACAGCTTCTGAGACAAGTAATCCTATGCCCTATATCCACCCCATGCCAATGAATGCACAAATATGTTaGACTGGTAAAATCCCAGAG +
Preference number: 5 (lower is better)
Translates to: MTASETSNPMPYIHPMPMNAQIC*TGKIPE
Trigger: CTCTGGGATTTTACCAGTCAAACATATTTGTGCATT...CATTGGCATGGGGTGGATATAGGGCATAGGATTACTTGTCTCAGAAGCTGTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR CAA 90 bp ATGACAGCTTCTGAGACAAGTAATCCTATGCCCTATATCCACCCCATGCCAATGTCTAAGTTTCTGAGATaGTATGCTGTACTGGCTATT +
Preference number: 5 (lower is better)
Translates to: MTASETSNPMPYIHPMPMSKFLR*YAVLAI
Trigger: AATAGCCAGTACAGCATACAATCTCAGAAACTTAGA...CATTGGCATGGGGTGGATATAGGGCATAGGATTACTTGTCTCAGAAGCTGTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR CAA 90 bp ATGCAAAGTAAGACCAGCCCAGTTGCCTTATCTGACATGGAATCTTTTTCCTGTTGCATTCTGATCCTTTaGCTCACTAAAGCTCACTTC +
Preference number: 5 (lower is better)
Translates to: MQSKTSPVALSDMESFSCCILIL*LTKAHF
Trigger: GAAGTGAGCTTTAGTGAGCAAAAGGATCAGAATGCA...ACAGGAAAAAGATTCCATGTCAGATAAGGCAACTGGGCTGGTCTTACTTTGCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR CAA 90 bp TATTTTACAGAAGACCTTCAGTGGTCCGGTAAGTCTTTCATGTCACAGCTGAGGAAGTGCTTTTTCACTTaGTCAGTTACCAACGTCAAA +
Preference number: 5 (lower is better)
Translates to: YFTEDLQWSGKSFMSQLRKCFFT*SVTNVK
Trigger: TTTGACGTTGGTAACTGACAAAGTGAAAAAGCACTT...CCTCAGCTGTGACATGAAAGACTTACCGGACCACTGAAGGTCTTCTGTAAAATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000343245.7
ENST00000369076.8
ENST00000646025.1
CDS-3UTR CAA 90 bp TCAAATCTAGATCAGAAGTTCACTCAAGCCTACTGCAAAGGCCTGACACTGGTTAAGTGCTTTTTCACTTaGTCAGTTACCAACGTCAAA +
Preference number: 5 (lower is better)
Translates to: SNLDQKFTQAYCKGLTLVKCFFT*SVTNVK
Trigger: TTTGACGTTGGTAACTGACAAAGTGAAAAAGCACTT...AACCAGTGTCAGGCCTTTGCAGTAGGCTTGAGTGAACTTCTGATCTAGATTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343245.7
ENST00000369076.8
CDS-3UTR CAA 90 bp GGATCAATAGCAGAAGGACAAACTTCTTTGAGGAGATCTCCTAGTGTGTGCAACCTCACTAATGTCTTCTaGTCTCATAACCTTCTGAAA +
Preference number: 5 (lower is better)
Translates to: GSIAEGQTSLRRSPSVCNLTNVF*SHNLLK
Trigger: TTTCAGAAGGTTATGAGACAAGAAGACATTAGTGAG...GTTGCACACACTAGGAGATCTCCTCAAAGAAGTTTGTCCTTCTGCTATTGATCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613993.1
ENST00000646025.1
CDS-3UTR CAA 90 bp CAGAAATACAAATCGAGTGGCACATACTTCCATTTTCTTCTTAGGCCAAAGGTTGAAGGACAAACTTCTTaGAGGAGATCTCCTAGTGTG +
Preference number: 5 (lower is better)
Translates to: QKYKSSGTYFHFLLRPKVEGQTS*RRSPSV
Trigger: CACACTAGGAGATCTCCTCAAAGAAGTTTGTCCTTC...AACCTTTGGCCTAAGAAGAAAATGGAAGTATGTGCCACTCGATTTGTATTTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR CAA 90 bp GCAGAGGTGTTTCCAACATTGGCTCAATTCCATGAATCATCACTTGATTCTTTTGAAGGACAAACTTCTTaGAGGAGATCTCCTAGTGTG +
Preference number: 5 (lower is better)
Translates to: AEVFPTLAQFHESSLDSFEGQTS*RRSPSV
Trigger: CACACTAGGAGATCTCCTCAAAGAAGTTTGTCCTTC...AAAAGAATCAAGTGATGATTCATGGAATTGAGCCAATGTTGGAAACACCTCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360666.6
ENST00000369070.5
ENST00000613993.1
ENST00000646025.1
CDS-3UTR CAA 90 bp GTTTCAGCTTCATTATATTTTACAGAAGACCTTCAGTGGTCCGGTAAGTCTTTCGAAGGACAAACTTCTTaGAGGAGATCTCCTAGTGTG +
Preference number: 5 (lower is better)
Translates to: VSASLYFTEDLQWSGKSFEGQTS*RRSPSV
Trigger: CACACTAGGAGATCTCCTCAAAGAAGTTTGTCCTTC...GAAAGACTTACCGGACCACTGAAGGTCTTCTGTAAAATATAATGAAGCTGAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR CAA 90 bp TTTCATGAGCTAAAGTTCAACCATGGTCACCTTAGGAAATACCCCTGTTTATTTGTAAGACCAGCCCAGTaGCCTTATCTGACATGGAAT +
Preference number: 5 (lower is better)
Translates to: FHELKFNHGHLRKYPCLFVRPAQ*PYLTWN
Trigger: ATTCCATGTCAGATAAGGCAACTGGGCTGGTCTTAC...AAATAAACAGGGGTATTTCCTAAGGTGACCATGGTTGAACTTTAGCTCATGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR CAA 90 bp GAAGACCTTCAGTGGTCCGGTAAGTCTTTCATGTCACAGCTGAGGTTTAATGATAATGCACAAATATGTTaGACTGGTAAAATCCCAGAG +
Preference number: 5 (lower is better)
Translates to: EDLQWSGKSFMSQLRFNDNAQIC*TGKIPE
Trigger: CTCTGGGATTTTACCAGTCAAACATATTTGTGCATT...ATCATTAAACCTCAGCTGTGACATGAAAGACTTACCGGACCACTGAAGGTCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR CAA 90 bp AAAGTAAGACCAGCCCAGTTGCCTTATCTGACATGGAATCTTTTTCCTGTCTGGTCTAAGTTTCTGAGATaGTATGCTGTACTGGCTATT +
Preference number: 5 (lower is better)
Translates to: KVRPAQLPYLTWNLFPVWSKFLR*YAVLAI
Trigger: AATAGCCAGTACAGCATACAATCTCAGAAACTTAGA...CCAGACAGGAAAAAGATTCCATGTCAGATAAGGCAACTGGGCTGGTCTTACTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR CAA 90 bp AATACAAATCGAGTGGCACATACTTCCATTTTCTTCTTAGGCCAAAGGTTTCAGTCTCGAAGCACATCTTaGTCATCTGTCATTCTTCCA +
Preference number: 5 (lower is better)
Translates to: NTNRVAHTSIFFLGQRFQSRSTS*SSVILP
Trigger: TGGAAGAATGACAGATGACAAAGATGTGCTTCGAGA...CTGAAACCTTTGGCCTAAGAAGAAAATGGAAGTATGTGCCACTCGATTTGTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR CAA 90 bp AAATCTAGATCAGAAGTTCACTCAAGCCTACTGCAAAGGCCTGACACTGGTTTTCAAATAGCAAACCAATaGGATAATGCCATTTCAGTG +
Preference number: 5 (lower is better)
Translates to: KSRSEVHSSLLQRPDTGFQIANQ*DNAISV
Trigger: CACTGAAATGGCATTATCCAATTGGTTTGCTATTTG...AAAACCAGTGTCAGGCCTTTGCAGTAGGCTTGAGTGAACTTCTGATCTAGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343245.7
ENST00000369076.8
CDS-3UTR CAA 90 bp AGGGTGACATGCTCTGATAAATCCCATTTAAGGATGATTCTGTTCAGGCAAATAGTCAAATCTGTCATTTaGCAATCCCATCCAGAGTTG +
Preference number: 5 (lower is better)
Translates to: RVTCSDKSHLRMILFRQIVKSVI*QSHPEL
Trigger: CAACTCTGGATGGGATTGCAAAATGACAGATTTGAC...TATTTGCCTGAACAGAATCATCCTTAAATGGGATTTATCAGAGCATGTCACCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR CAA 90 bp TACCCCTGTTTATTTGTTAATCAGAAATACAAATCGAGTGGCACATACTTCCATTCCATGAGTTTCCGATaGATGGCCCAAAACTGGTCA +
Preference number: 5 (lower is better)
Translates to: YPCLFVNQKYKSSGTYFHSMSFR*MAQNWS
Trigger: TGACCAGTTTTGGGCCATCAATCGGAAACTCATGGA...ATGGAAGTATGTGCCACTCGATTTGTATTTCTGATTAACAAATAAACAGGGGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR CAA 90 bp ATCTCTCACTGTTCATTATCAAAGTTACAAGATTGCATACCAATAGACAGACTGTTTTTCCTGTCTGGCTaGCAGCAGCGAAGTGTTTCT +
Preference number: 5 (lower is better)
Translates to: ISHCSLSKLQDCIPIDRLFFLSG*QQRSVS
Trigger: AGAAACACTTCGCTGCTGCAAGCCAGACAGGAAAAA...CAGTCTGTCTATTGGTATGCAATCTTGTAACTTTGATAATGAACAGTGAGAGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR CAA 90 bp ACCCCTGTTTATTTGTTAATCAGAAATACAAATCGAGTGGCACATACTTCCATTGTAAGACCAGCCCAGTaGCCTTATCTGACATGGAAT +
Preference number: 5 (lower is better)
Translates to: TPVYLLIRNTNRVAHTSIVRPAQ*PYLTWN
Trigger: ATTCCATGTCAGATAAGGCAACTGGGCTGGTCTTAC...AATGGAAGTATGTGCCACTCGATTTGTATTTCTGATTAACAAATAAACAGGGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR CAA 90 bp ATCTCTCACTGTTCATTATCAAAGTTACAAGATTGCATACCAATAGACAGACTGGTAAGACCAGCCCAGTaGCCTTATCTGACATGGAAT +
Preference number: 5 (lower is better)
Translates to: ISHCSLSKLQDCIPIDRLVRPAQ*PYLTWN
Trigger: ATTCCATGTCAGATAAGGCAACTGGGCTGGTCTTAC...CAGTCTGTCTATTGGTATGCAATCTTGTAACTTTGATAATGAACAGTGAGAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000646025.1
CDS-3UTR CAA 90 bp TGGGTCAACATTCAATATGGACAGCCAGCTAGCTCACAAGAAATGAAATGTAATTGCATTCTGATCCTTTaGCTCACTAAAGCTCACTTC +
Preference number: 5 (lower is better)
Translates to: WVNIQYGQPASSQEMKCNCILIL*LTKAHF
Trigger: GAAGTGAGCTTTAGTGAGCAAAAGGATCAGAATGCA...ATTACATTTCATTTCTTGTGAGCTAGCTGGCTGTCCATATTGAATGTTGACCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR CAA 90 bp TCTGATACTGTAAGCCTTTTAGCGTACTCAAATGGGTCAACATTCAATATGGACTGCATTCTGATCCTTTaGCTCACTAAAGCTCACTTC +
Preference number: 5 (lower is better)
Translates to: SDTVSLLAYSNGSTFNMDCILIL*LTKAHF
Trigger: GAAGTGAGCTTTAGTGAGCAAAAGGATCAGAATGCA...GTCCATATTGAATGTTGACCCATTTGAGTACGCTAAAAGGCTTACAGTATCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR CAA 90 bp TGGGTCAACATTCAATATGGACAGCCAGCTAGCTCACAAGAAATGAAATGTAATATGAAAAACACTAGCTaGGAAGGAATGGGTTTTTCC +
Preference number: 5 (lower is better)
Translates to: WVNIQYGQPASSQEMKCNMKNTS*EGMGFS
Trigger: GGAAAAACCCATTCCTTCCAAGCTAGTGTTTTTCAT...ATTACATTTCATTTCTTGTGAGCTAGCTGGCTGTCCATATTGAATGTTGACCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR CAA 90 bp AATACAAATCGAGTGGCACATACTTCCATTTTCTTCTTAGGCCAAAGGTTTCAGAAGTGCTTTTTCACTTaGTCAGTTACCAACGTCAAA +
Preference number: 5 (lower is better)
Translates to: NTNRVAHTSIFFLGQRFQKCFFT*SVTNVK
Trigger: TTTGACGTTGGTAACTGACAAAGTGAAAAAGCACTT...CTGAAACCTTTGGCCTAAGAAGAAAATGGAAGTATGTGCCACTCGATTTGTATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000343245.7
ENST00000369076.8
ENST00000646025.1
CDS-3UTR CAA 90 bp GCAGAGGTGTTTCCAACATTGGCTCAATTCCATGAATCATCACTTGATTCTTTTCAAATAGCAAACCAATaGGATAATGCCATTTCAGTG +
Preference number: 5 (lower is better)
Translates to: AEVFPTLAQFHESSLDSFQIANQ*DNAISV
Trigger: CACTGAAATGGCATTATCCAATTGGTTTGCTATTTG...AAAAGAATCAAGTGATGATTCATGGAATTGAGCCAATGTTGGAAACACCTCTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613993.1
ENST00000646025.1
CDS-3UTR CAA 90 bp GTGACATGCTCTGATAAATCCCATTTAAGGATGATTCTGTTCAGGCAAATAGTTATGAAAAACACTAGCTaGGAAGGAATGGGTTTTTCC +
Preference number: 5 (lower is better)
Translates to: VTCSDKSHLRMILFRQIVMKNTS*EGMGFS
Trigger: GGAAAAACCCATTCCTTCCAAGCTAGTGTTTTTCAT...AACTATTTGCCTGAACAGAATCATCCTTAAATGGGATTTATCAGAGCATGTCAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR CAA 90 bp GTTTCAGCTTCATTATATTTTACAGAAGACCTTCAGTGGTCCGGTAAGTCTTTCAATGCACAAATATGTTaGACTGGTAAAATCCCAGAG +
Preference number: 5 (lower is better)
Translates to: VSASLYFTEDLQWSGKSFNAQIC*TGKIPE
Trigger: CTCTGGGATTTTACCAGTCAAACATATTTGTGCATT...GAAAGACTTACCGGACCACTGAAGGTCTTCTGTAAAATATAATGAAGCTGAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR CAA 90 bp GCAGAGGTGTTTCCAACATTGGCTCAATTCCATGAATCATCACTTGATTCTTTTTCTAAGTTTCTGAGATaGTATGCTGTACTGGCTATT +
Preference number: 5 (lower is better)
Translates to: AEVFPTLAQFHESSLDSFSKFLR*YAVLAI
Trigger: AATAGCCAGTACAGCATACAATCTCAGAAACTTAGA...AAAAGAATCAAGTGATGATTCATGGAATTGAGCCAATGTTGGAAACACCTCTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360666.6
ENST00000369070.5
CDS-3UTR CAA 90 bp AGGGTGACATGCTCTGATAAATCCCATTTAAGGATGATTCTGTTCAGGCAAATATCTAAGTTTCTGAGATaGTATGCTGTACTGGCTATT +
Preference number: 5 (lower is better)
Translates to: RVTCSDKSHLRMILFRQISKFLR*YAVLAI
Trigger: AATAGCCAGTACAGCATACAATCTCAGAAACTTAGA...TATTTGCCTGAACAGAATCATCCTTAAATGGGATTTATCAGAGCATGTCACCCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR CAA 90 bp GTGACATGCTCTGATAAATCCCATTTAAGGATGATTCTGTTCAGGCAAATAGTTCTCACTAATGTCTTCTaGTCTCATAACCTTCTGAAA +
Preference number: 5 (lower is better)
Translates to: VTCSDKSHLRMILFRQIVLTNVF*SHNLLK
Trigger: TTTCAGAAGGTTATGAGACAAGAAGACATTAGTGAG...AACTATTTGCCTGAACAGAATCATCCTTAAATGGGATTTATCAGAGCATGTCAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343245.7
ENST00000369076.8
ENST00000646025.1
CDS-3UTR CAA 90 bp TTTCATGAGCTAAAGTTCAACCATGGTCACCTTAGGAAATACCCCTGTTTATTTTCTAAGTTTCTGAGATaGTATGCTGTACTGGCTATT +
Preference number: 5 (lower is better)
Translates to: FHELKFNHGHLRKYPCLFSKFLR*YAVLAI
Trigger: AATAGCCAGTACAGCATACAATCTCAGAAACTTAGA...AAATAAACAGGGGTATTTCCTAAGGTGACCATGGTTGAACTTTAGCTCATGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS-3UTR CAA 90 bp ACCCCTGTTTATTTGTTAATCAGAAATACAAATCGAGTGGCACATACTTCCATTCTCACTAATGTCTTCTaGTCTCATAACCTTCTGAAA +
Preference number: 5 (lower is better)
Translates to: TPVYLLIRNTNRVAHTSILTNVF*SHNLLK
Trigger: TTTCAGAAGGTTATGAGACAAGAAGACATTAGTGAG...AATGGAAGTATGTGCCACTCGATTTGTATTTCTGATTAACAAATAAACAGGGGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343245.7
ENST00000369076.8
ENST00000646025.1
CDS-3UTR CAA 90 bp ACCCCTGTTTATTTGTTAATCAGAAATACAAATCGAGTGGCACATACTTCCATTAATGCACAAATATGTTaGACTGGTAAAATCCCAGAG +
Preference number: 5 (lower is better)
Translates to: TPVYLLIRNTNRVAHTSINAQIC*TGKIPE
Trigger: CTCTGGGATTTTACCAGTCAAACATATTTGTGCATT...AATGGAAGTATGTGCCACTCGATTTGTATTTCTGATTAACAAATAAACAGGGGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
CDS CCA 72 bp CCGCACTGGTGGGGACGCCCAGATTCCGCGCTCCGGTaGGGCGGCGGGGCAAGCTGCCCGCCTGACACACTG +
Preference number: 6 (lower is better)
Translates to: PHWWGRPDSALR*GGGASCPPDTL
Trigger: CAGTGTGTCAGGCGGGCAGCTTGCCCCGCCGCCCCACCGGAGCGCGGAATCTGGGCGTCCCCACCAGTGCGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000636335.1
ENST00000636437.1
ENST00000646025.1
CDS GCA 72 bp CCAGGGCTCCGGGCCGGCGTCTCGCCAACTCCACCTTaGCCGGAGGAACCACCTTCACCCGCCATCGCGGCC +
Preference number: 6 (lower is better)
Translates to: PGLRAGVSPTPP*PEEPPSPAIAA
Trigger: GGCCGCGATGGCGGGTGAAGGTGGTTCCTCCGGGCAAGGTGGAGTTGGCGAGACGCCGGCCCGGAGCCCTGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343245.7
CDS GCA 72 bp GGCGGCGGGGCAAGCTGCCCGCCTGACACACTGTCCTaGGGGGACGCGGTAGCAGGACTCCAGGAAGCCCGC +
Preference number: 6 (lower is better)
Translates to: GGGASCPPDTLS*GDAVAGLQEAR
Trigger: GCGGGCTTCCTGGAGTCCTGCTACCGCGTCCCCGCAGGACAGTGTGTCAGGCGGGCAGCTTGCCCCGCCGCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000636335.1
ENST00000636437.1
ENST00000646025.1
CDS CCA 72 bp CAAGCTATGGCTCCTCCTTCCGGCTCCCCGCACTGGTaGGGACGCCCAGATTCCGCGCTCCGGTGGGGCGGC +
Preference number: 6 (lower is better)
Translates to: QAMAPPSGSPHW*GRPDSALRWGG
Trigger: GCCGCCCCACCGGAGCGCGGAATCTGGGCGTCCCCACCAGTGCGGGGAGCCGGAAGGAGGAGCCATAGCTTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000636335.1
ENST00000636437.1
ENST00000646025.1
CDS CCA 72 bp GAGGTCGGAGCTGAACCCTGCTGCACTTCCGCCCTCTaGTATCCAGCGAATACAACCGGCAACGCTGCGGAG +
Preference number: 6 (lower is better)
Translates to: EVGAEPCCTSAL*YPANTTGNAAE
Trigger: CTCCGCAGCGTTGCCGGTTGTATTCGCTGGATACCAGAGGGCGGAAGTGCAGCAGGGTTCAGCTCCGACCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369070.5
ENST00000646025.1
CDS GCA 72 bp AAAAGCACCGGCGCGGAGGTCGGAGCTGAACCCTGCTaGACTTCCGCCCTCTGGTATCCAGCGAATACAACC +
Preference number: 6 (lower is better)
Translates to: KSTGAEVGAEPC*TSALWYPANTT
Trigger: GGTTGTATTCGCTGGATACCAGAGGGCGGAAGTGCAGCAGGGTTCAGCTCCGACCTCCGCGCCGGTGCTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369070.5
ENST00000369076.8
ENST00000636437.1
ENST00000646025.1
CDS GCA 72 bp GCAAAAAGCACCGGCGCGGAGGTCGGAGCTGAACCCTaGTGCACTTCCGCCCTCTGGTATCCAGCGAATACA +
Preference number: 6 (lower is better)
Translates to: AKSTGAEVGAEP*CTSALWYPANT
Trigger: TGTATTCGCTGGATACCAGAGGGCGGAAGTGCAGCAGGGTTCAGCTCCGACCTCCGCGCCGGTGCTTTTTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369070.5
ENST00000369076.8
ENST00000636437.1
ENST00000646025.1
CDS CCA 72 bp TCTTATTTCAACCAAAGCCAAACCTACTCCAAGCTATaGCTCCTCCTTCCGGCTCCCCGCACTGGTGGGGAC +
Preference number: 6 (lower is better)
Translates to: SYFNQSQTYSKL*LLLPAPRTGGD
Trigger: GTCCCCACCAGTGCGGGGAGCCGGAAGGAGGAGCCATAGCTTGGAGTAGGTTTGGCTTTGGTTGAAATAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000636335.1
ENST00000636437.1
ENST00000646025.1
CDS GCA 72 bp CAGTCGTTGTATTGTGGACTCACTGCGTCCACTGTTTaGGAGCTTTTCCAGAACGCTCGCCACCAGTTAGGG +
Preference number: 6 (lower is better)
Translates to: QSLYCGLTASTV*ELFQNARHQLG
Trigger: CCCTAACTGGTGGCGAGCGTTCTGGAAAAGCTCGCAAACAGTGGACGCAGTGAGTCCACAATACAACGACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646025.1
CDS CAA 72 bp TCAGTCGTTGTATTGTGGACTCACTGCGTCCACTGTTaGCGAGCTTTTCCAGAACGCTCGCCACCAGTTAGG +
Preference number: 6 (lower is better)
Translates to: SVVVLWTHCVHC*RAFPERSPPVR
Trigger: CCTAACTGGTGGCGAGCGTTCTGGAAAAGCTCGCAAACAGTGGACGCAGTGAGTCCACAATACAACGACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646025.1
CDS CAA 90 bp AAAGGTCTTTCAGTCGTTGTATTGTGGACTCACTGCGTCCACTGTTaGCGAGCTTTTCCAGAACGCTCGCCACCAGTTAGGGTAGCCAAG +
Preference number: 6 (lower is better)
Translates to: KGLSVVVLWTHCVHC*RAFPERSPPVRVAK
Trigger: CTTGGCTACCCTAACTGGTGGCGAGCGTTCTGGAAAAGCTCGCAAACAGTGGACGCAGTGAGTCCACAATACAACGACTGAAAGACCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646025.1
CDS CAA 90 bp CCTGGTGGGATCTCTTCAGGATCAATAGCAGAAGGACAAACTTCTTaGAGGAGATCTCCTAGTGTGTGCAACTGTCCATCTGCAGCCACA +
Preference number: 6 (lower is better)
Translates to: PGGISSGSIAEGQTS*RRSPSVCNCPSAAT
Trigger: TGTGGCTGCAGATGGACAGTTGCACACACTAGGAGATCTCCTCAAAGAAGTTTGTCCTTCTGCTATTGATCCTGAAGAGATCCCACCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636335.1
CDS GCA 72 bp ATGAAAGGTCTTTCAGTCGTTGTATTGTGGACTCACTaGGTCCACTGTTTGCGAGCTTTTCCAGAACGCTCG +
Preference number: 6 (lower is better)
Translates to: MKGLSVVVLWTH*VHCLRAFPERS
Trigger: CGAGCGTTCTGGAAAAGCTCGCAAACAGTGGACGCAGTGAGTCCACAATACAACGACTGAAAGACCTTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646025.1
CDS CAA 90 bp CTGATTGTATTACCTTCAGGATCAATAGCAGAAGGACAAACTTCTTaGAGGAGATCTCCTAGTGTGTGCAACTGTCCATCTGCAGCCACA +
Preference number: 6 (lower is better)
Translates to: LIVLPSGSIAEGQTS*RRSPSVCNCPSAAT
Trigger: TGTGGCTGCAGATGGACAGTTGCACACACTAGGAGATCTCCTCAAAGAAGTTTGTCCTTCTGCTATTGATCCTGAAGGTAATACAATCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476518.1
CDS CAA 72 bp GGAATTCGTCCAAACCACACATCTCGAAGCACATCTTaGTCATCTGTCATTCTTCCAGGAGTTAAAGCAGTA +
Preference number: 6 (lower is better)
Translates to: GIRPNHTSRSTS*SSVILPGVKAV
Trigger: TACTGCTTTAACTCCTGGAAGAATGACAGATGACAAAGATGTGCTTCGAGATGTGTGGTTTGGACGAATTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000636335.1
ENST00000636437.1
ENST00000646025.1
CDS CAA 72 bp TTACCTTCAGGATCAATAGCAGAAGGACAAACTTCTTaGAGGAGATCTCCTAGTGTGTGCAACTGTCCATCT +
Preference number: 6 (lower is better)
Translates to: LPSGSIAEGQTS*RRSPSVCNCPS
Trigger: AGATGGACAGTTGCACACACTAGGAGATCTCCTCAAAGAAGTTTGTCCTTCTGCTATTGATCCTGAAGGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476518.1
CDS CAA 72 bp ATCTCTTCAGGATCAATAGCAGAAGGACAAACTTCTTaGAGGAGATCTCCTAGTGTGTGCAACTGTCCATCT +
Preference number: 6 (lower is better)
Translates to: ISSGSIAEGQTS*RRSPSVCNCPS
Trigger: AGATGGACAGTTGCACACACTAGGAGATCTCCTCAAAGAAGTTTGTCCTTCTGCTATTGATCCTGAAGAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636335.1
CDS CAA 90 bp AAACAAGTTGGAATTCGTCCAAACCACACATCTCGAAGCACATCTTaGTCATCTGTCATTCTTCCAGGAGTTAAAGCAGTACATACAGGC +
Preference number: 6 (lower is better)
Translates to: KQVGIRPNHTSRSTS*SSVILPGVKAVHTG
Trigger: GCCTGTATGTACTGCTTTAACTCCTGGAAGAATGACAGATGACAAAGATGTGCTTCGAGATGTGTGGTTTGGACGAATTCCAACTTGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343245.7
ENST00000360666.6
ENST00000369070.5
ENST00000369076.8
ENST00000635758.2
ENST00000636335.1
ENST00000636437.1
ENST00000646025.1
CDS CCA 72 bp GGATATTCCATGAGTTTCCGATTGATGGCCCAAAACTaGTCAAATCTGTATAGTATGGTTCTGCTTCCCTTT +
Preference number: 6 (lower is better)
Translates to: GYSMSFRLMAQN*SNLYSMVLLPF
Trigger: AAAGGGAAGCAGAACCATACTATACAGATTTGACCAGTTTTGGGCCATCAATCGGAAACTCATGGAATATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360666.6
CDS CAA 72 bp CCATTTTCTTCTGCAGGATATTCCATGAGTTTCCGATaGATGGCCCAAAACTGGTCAAATCTGTATAGTATG +
Preference number: 6 (lower is better)
Translates to: PFSSAGYSMSFR*MAQNWSNLYSM
Trigger: CATACTATACAGATTTGACCAGTTTTGGGCCATCAATCGGAAACTCATGGAATATCCTGCAGAAGAAAATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360666.6
CDS CAA 72 bp TCACTTTGTCAGTTACCAACGTCAAATAACTTACTCTaGGCAAAAGCAAATAGTATGGTTCTGCTTCCCTTT +
Preference number: 6 (lower is better)
Translates to: SLCQLPTSNNLL*AKANSMVLLPF
Trigger: AAAGGGAAGCAGAACCATACTATTTGCTTTTGCCAAGAGTAAGTTATTTGACGTTGGTAACTGACAAAGTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343245.7
ENST00000369076.8
ENST00000613993.1
ENST00000646025.1
CDS CCA 72 bp CAAATCCAAAGTTGGGTGGGACATTCTAAAGATAATTaGCTGGGACCCTTCAAAAACTTAAAGACATTAAAA +
Preference number: 6 (lower is better)
Translates to: QIQSWVGHSKDN*LGPFKNLKTLK
Trigger: TTTTAATGTCTTTAAGTTTTTGAAGGGTCCCAGCCAATTATCTTTAGAATGTCCCACCCAACTTTGGATTTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475645.1