RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ATG2A (Homo sapiens)

Ensembl gene IDs: ENSG00000110046

Ensembl transcript IDs: ENST00000377264.8, ENST00000418259.5, ENST00000421419.3, ENST00000461701.5, ENST00000461955.1, ENST00000472525.1

Found 746 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATCCCCTaGAGGGCCAGGCCGGGCCGGGCCCGTGGGCTGCAGCTCTTGGGA +
Preference number: 1 (lower is better)
Translates to: GNGQAGKASFTVAIP*RARPGRARGLQLLG
Trigger: TCCCAAGAGCTGCAGCCCACGGGCCCGGCCCGGCCTGGCCCTTCAGGGGATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
3UTR CCA 90 bp CACAGCAGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTaGCCATCCCCTGAAGGGCCAGGCCGGGCCGGGCCCGTGGGCTGC +
Preference number: 1 (lower is better)
Translates to: HSRLATGRLGRRPSQ*PSPEGPGRAGPVGC
Trigger: GCAGCCCACGGGCCCGGCCCGGCCTGGCCCTTCAGGGGATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCTGCTGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
3UTR-3UTR GCA 90 bp TGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATCCCCTGAAGGGCGCCGGGCCCGTGGGCTaGAGCTCTTGGGAGGCTCAG +
Preference number: 2 (lower is better)
Translates to: WQRAGWEGVLHSGHPLKGAGPVG*SSWEAQ
Trigger: CTGAGCCTCCCAAGAGCTGCAGCCCACGGGCCCGGC...GCCCTTCAGGGGATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
3UTR-3UTR TCA 90 bp TTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGAAGGACAGTGGCCATCCCCTaGAGGGCCAGGCCGGGCCGG +
Preference number: 2 (lower is better)
Translates to: LAEWDGVRGSKSLRPGRRTVAIP*RARPGR
Trigger: CCGGCCCGGCCTGGCCCTTCAGGGGATGGCCACTGT...CCTTCTCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
3UTR-3UTR GCA 90 bp CCCCCTCTCACAGCAGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGCCGGGCCCGTGGGCTaGAGCTCTTGGGAGGCTCAG +
Preference number: 2 (lower is better)
Translates to: PPLTADWQRAGWEGVLHSAGPVG*SSWEAQ
Trigger: CTGAGCCTCCCAAGAGCTGCAGCCCACGGGCCCGGC...ACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCTGCTGTGAGAGGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
3UTR-3UTR CCA 90 bp CTCACAGCAGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATGTGGGCAGCACCCTCTaGGTGCCGGGCACCCCAGGC +
Preference number: 2 (lower is better)
Translates to: LTADWQRAGWEGVLHSGHVGSTL*VPGTPG
Trigger: GCCTGGGGTGCCCGGCACCCAGAGGGTGCTGCCCAC...ATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCTGCTGTGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
3UTR-3UTR CCA 90 bp CAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCGTGGGCAGCACCCTCTaGGTGCCGGGCACCCCAGGC +
Preference number: 2 (lower is better)
Translates to: QKDTWLSGMGSEGPKASVVGSTL*VPGTPG
Trigger: GCCTGGGGTGCCCGGCACCCAGAGGGTGCTGCCCAC...GACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
3UTR-3UTR GCA 90 bp GGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGAAGGCAGCAGTGTGGTCCCCGGAGGAAAAGTaGAGAGCCAGGGCTAAGGCC +
Preference number: 2 (lower is better)
Translates to: GWGPRVQKPPSWEKAAVWSPEEK*RARAKA
Trigger: GGCCTTAGCCCTGGCTCTGCACTTTTCCTCCGGGGA...CCACACTGCTGCCTTCTCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
3UTR-3UTR CCA 90 bp TGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGAAGGCGTGGGCTGCAGCTCTTaGGAGGCTCAGGAGCATGGT +
Preference number: 2 (lower is better)
Translates to: WLSGMGSEGPKASVLGEGVGCSS*EAQEHG
Trigger: ACCATGCTCCTGAGCCTCCCAAGAGCTGCAGCCCAC...GCCTTCTCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
3UTR-3UTR CCA 90 bp GGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGAAGGCAGCAGTGTGGTGGCAACGGGCAGGCTaGGAAGGCGTCCTTCACAGT +
Preference number: 2 (lower is better)
Translates to: GWGPRVQKPPSWEKAAVWWQRAG*EGVLHS
Trigger: ACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCA...CCACACTGCTGCCTTCTCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
3UTR-3UTR CCA 90 bp TTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGAAGGGTGGGCTGCAGCTCTTaGGAGGCTCAGGAGCATGGT +
Preference number: 2 (lower is better)
Translates to: LAEWDGVRGSKSLRPGRRVGCSS*EAQEHG
Trigger: ACCATGCTCCTGAGCCTCCCAAGAGCTGCAGCCCAC...CCTTCTCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
3UTR-3UTR GCA 90 bp CAGACACAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCCCGGAGGAAAAGTaGAGAGCCAGGGCTAAGGCC +
Preference number: 2 (lower is better)
Translates to: QTQKDTWLSGMGSEGPKASPEEK*RARAKA
Trigger: GGCCTTAGCCCTGGCTCTGCACTTTTCCTCCGGGGA...GGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTGTGTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
3UTR-3UTR GCA 90 bp CAGACACTGACCCACGCACTCACGGAGCTTAAAAATAATACATCGAACCACACGGCCGGGCCCGTGGGCTaGAGCTCTTGGGAGGCTCAG +
Preference number: 2 (lower is better)
Translates to: QTLTHALTELKNNTSNHTAGPVG*SSWEAQ
Trigger: CTGAGCCTCCCAAGAGCTGCAGCCCACGGGCCCGGC...CGTGTGGTTCGATGTATTATTTTTAAGCTCCGTGAGTGCGTGGGTCAGTGTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
3UTR-3UTR CCA 90 bp CACTCACGGAGCTTAAAAATAATACATCGAACCACACGGATATCATCCCCTCCTGTGGGCAGCACCCTCTaGGTGCCGGGCACCCCAGGC +
Preference number: 2 (lower is better)
Translates to: HSRSLKIIHRTTRISSPPVGSTL*VPGTPG
Trigger: GCCTGGGGTGCCCGGCACCCAGAGGGTGCTGCCCAC...AGGAGGGGATGATATCCGTGTGGTTCGATGTATTATTTTTAAGCTCCGTGAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
3UTR-3UTR CCA 90 bp CAGACACTGACCCACGCACTCACGGAGCTTAAAAATAATACATCGAACCACACGCCTCTCACAGCAGATTaGCAACGGGCAGGCTGGGAA +
Preference number: 2 (lower is better)
Translates to: QTLTHALTELKNNTSNHTPLTAD*QRAGWE
Trigger: TTCCCAGCCTGCCCGTTGCCAATCTGCTGTGAGAGG...CGTGTGGTTCGATGTATTATTTTTAAGCTCCGTGAGTGCGTGGGTCAGTGTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
3UTR-3UTR CCA 90 bp CACTCACGGAGCTTAAAAATAATACATCGAACCACACGGATATCATCCCCTCCTAGACACTTGGCTGAGTaGGATGGGGTCCGAGGGTCC +
Preference number: 2 (lower is better)
Translates to: HSRSLKIIHRTTRISSPPRHLAE*DGVRGS
Trigger: GGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCT...AGGAGGGGATGATATCCGTGTGGTTCGATGTATTATTTTTAAGCTCCGTGAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
3UTR-3UTR TCA 90 bp CACTCACGGAGCTTAAAAATAATACATCGAACCACACGGATATCATCCCCTCCTAGAAAGACACTTGGCTaGGTGGGATGGGGTCCGAGG +
Preference number: 2 (lower is better)
Translates to: HSRSLKIIHRTTRISSPPRKTLG*VGWGPR
Trigger: CCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCT...AGGAGGGGATGATATCCGTGTGGTTCGATGTATTATTTTTAAGCTCCGTGAGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
3UTR TCA 72 bp CAGGCTGGGAAGGCGTCCTTCACAGTGGCCATCCCCTaGAGGGCCAGGCCGGGCCGGGCCCGTGGGCTGCAG +
Preference number: 3 (lower is better)
Translates to: QAGKASFTVAIP*RARPGRARGLQ
Trigger: CTGCAGCCCACGGGCCCGGCCCGGCCTGGCCCTTCAGGGGATGGCCACTGTGAAGGACGCCTTCCCAGCCTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
3UTR GCA 72 bp TCCCCTGAAGGGCCAGGCCGGGCCGGGCCCGTGGGCTaGAGCTCTTGGGAGGCTCAGGAGCATGGTGGGCAG +
Preference number: 3 (lower is better)
Translates to: SPEGPGRAGPVG*SSWEAQEHGGQ
Trigger: CTGCCCACCATGCTCCTGAGCCTCCCAAGAGCTGCAGCCCACGGGCCCGGCCCGGCCTGGCCCTTCAGGGGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
3UTR-3UTR CAA 90 bp CAGACACAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCCCCTCTCACAGCAGATaGGCAACGGGCAGGCTGGGA +
Preference number: 3 (lower is better)
Translates to: QTQKDTWLSGMGSEGPKAPSHSR*ATGRLG
Trigger: TCCCAGCCTGCCCGTTGCCAATCTGCTGTGAGAGGG...GGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTGTGTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR TCA 90 bp TGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATCCCCTGAAGGGCACAGTGGCCATCCCCTaGAGGGCCAGGCCGGGCCGG +
Preference number: 4 (lower is better)
Translates to: WQRAGWEGVLHSGHPLKGTVAIP*RARPGR
Trigger: CCGGCCCGGCCTGGCCCTTCAGGGGATGGCCACTGT...GCCCTTCAGGGGATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR CCA 90 bp GGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGAAGGCAGCAGTGTGGGCCCTGTGGCCGGGGTaGGGGCCAAAGTCTCGGCCC +
Preference number: 4 (lower is better)
Translates to: GWGPRVQKPPSWEKAAVWALWPG*GPKSRP
Trigger: GGGCCGAGACTTTGGCCCCCACCCCGGCCACAGGGC...CCACACTGCTGCCTTCTCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp GGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGAAGGCAGCAGTGTGGAGGTCGGCAGGCTGCTaGCCCCTGCGCAGCCTCCGC +
Preference number: 4 (lower is better)
Translates to: GWGPRVQKPPSWEKAAVWRSAGC*PLRSLR
Trigger: GCGGAGGCTGCGCAGGGGCCAGCAGCCTGCCGACCT...CCACACTGCTGCCTTCTCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR CCA 90 bp TGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATCCCCTGAAGGGCTGCCCCCGAGCAGGCTaGACGTGGCCTCCGTGGCCA +
Preference number: 4 (lower is better)
Translates to: WQRAGWEGVLHSGHPLKGCPRAG*TWPPWP
Trigger: TGGCCACGGAGGCCACGTCCAGCCTGCTCGGGGGCA...GCCCTTCAGGGGATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR TCA 90 bp TTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATCCCCTGAAGGGGTCGTGCCAGAAGCCTaGGGGGCCGGGGAAGCCCGA +
Preference number: 4 (lower is better)
Translates to: LATGRLGRRPSQWPSPEGVVPEA*GAGEAR
Trigger: TCGGGCTTCCCCGGCCCCTCAGGCTTCTGGCACGAC...CCCTTCAGGGGATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR GCA 90 bp TGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATCCCCTGAAGGGCGGTTGGGGGCCATCTTaGCAGCTGGGTGGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: WQRAGWEGVLHSGHPLKGGWGPS*QLGGPG
Trigger: CCCAGGCCCACCCAGCTGGCAAGATGGCCCCCAACC...GCCCTTCAGGGGATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR GCA 90 bp TGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATCCCCTGAAGGGCCCAGCTCCCGTAGGCTaGGCTCGGTGTCCAGGAGGG +
Preference number: 4 (lower is better)
Translates to: WQRAGWEGVLHSGHPLKGPAPVG*ARCPGG
Trigger: CCCTCCTGGACACCGAGCGCAGCCTACGGGAGCTGG...GCCCTTCAGGGGATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR GCA 90 bp TGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGAAGGCAGCAGTGTGAGGCAGCCCCTCGCTaGAGCCCCCGCATGAGGCGG +
Preference number: 4 (lower is better)
Translates to: WDGVRGSKSLRPGRRQQCEAAPR*SPRMRR
Trigger: CCGCCTCATGCGGGGGCTGCAGCGAGGGGCTGCCTC...ACACTGCTGCCTTCTCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR GCA 90 bp TTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATCCCCTGAAGGGGCCGGGCCCGTGGGCTaGAGCTCTTGGGAGGCTCAG +
Preference number: 4 (lower is better)
Translates to: LATGRLGRRPSQWPSPEGAGPVG*SSWEAQ
Trigger: CTGAGCCTCCCAAGAGCTGCAGCCCACGGGCCCGGC...CCCTTCAGGGGATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR CCA 90 bp CCTCTCACAGCAGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCAGCGCAGCCGCAGCGTaGCCCGGGGTGCAGAGAGCC +
Preference number: 4 (lower is better)
Translates to: PLTADWQRAGWEGVLHSGSAAAA*PGVQRA
Trigger: GGCTCTCTGCACCCCGGGCCACGCTGCGGCTGCGCT...GCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCTGCTGTGAGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp TGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATCCCCTGAAGGGCCGCAGGGCCTGTGGCTaGCTCCGCTGGGTACACCTC +
Preference number: 4 (lower is better)
Translates to: WQRAGWEGVLHSGHPLKGRRACG*LRWVHL
Trigger: GAGGTGTACCCAGCGGAGCCAGCCACAGGCCCTGCG...GCCCTTCAGGGGATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp TTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATCCCCTGAAGGGGGGCCGCAGGGCCTGTaGCTGGCTCCGCTGGGTACA +
Preference number: 4 (lower is better)
Translates to: LATGRLGRRPSQWPSPEGGPQGL*LAPLGT
Trigger: TGTACCCAGCGGAGCCAGCCACAGGCCCTGCGGCCC...CCCTTCAGGGGATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAA
68% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp TTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGAAGGAGGTCGGCAGGCTGCTaGCCCCTGCGCAGCCTCCGC +
Preference number: 4 (lower is better)
Translates to: LAEWDGVRGSKSLRPGRRRSAGC*PLRSLR
Trigger: GCGGAGGCTGCGCAGGGGCCAGCAGCCTGCCGACCT...CCTTCTCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR CCA 90 bp TTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATCCCCTGAAGGGTGCCCCCGAGCAGGCTaGACGTGGCCTCCGTGGCCA +
Preference number: 4 (lower is better)
Translates to: LATGRLGRRPSQWPSPEGCPRAG*TWPPWP
Trigger: TGGCCACGGAGGCCACGTCCAGCCTGCTCGGGGGCA...CCCTTCAGGGGATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR CCA 90 bp TGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGAAGGCAGCAGTGTGTGGGCAGCACCCTCTaGGTGCCGGGCACCCCAGGC +
Preference number: 4 (lower is better)
Translates to: WDGVRGSKSLRPGRRQQCVGSTL*VPGTPG
Trigger: GCCTGGGGTGCCCGGCACCCAGAGGGTGCTGCCCAC...ACACTGCTGCCTTCTCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR TCA 90 bp CCCCCTCTCACAGCAGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTAGGAAGGCAGGCGGCTaGTGCACGTCCACCGGCGGC +
Preference number: 4 (lower is better)
Translates to: PPLTADWQRAGWEGVLHSRKAGG*CTSTGG
Trigger: GCCGCCGGTGGACGTGCATCAGCCGCCTGCCTTCCT...ACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCTGCTGTGAGAGGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR TCA 90 bp TGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATCCCCTGAAGGGCGCAATGGCAGGCAACTaGGCGCCGGGGTCGGCTCTT +
Preference number: 4 (lower is better)
Translates to: WQRAGWEGVLHSGHPLKGAMAGN*APGSAL
Trigger: AAGAGCCGACCCCGGCGCTCAGTTGCCTGCCATTGC...GCCCTTCAGGGGATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR TCA 90 bp GACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAAGGGAGGTGGCCACCTaGAGGCTGGGCCAGCTCCCG +
Preference number: 4 (lower is better)
Translates to: DTWLSGMGSEGPKASVLGREVAT*RLGQLP
Trigger: CGGGAGCTGGCCCAGCCTTCAGGTGGCCACCTCCCT...TCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR TCA 90 bp GACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGACCCCTGCGTGCGCCATaGGTTCTGGGGCCGGTTGGG +
Preference number: 4 (lower is better)
Translates to: DTWLSGMGSEGPKASVLGPLRAP*VLGPVG
Trigger: CCCAACCGGCCCCAGAACTCATGGCGCACGCAGGGG...TCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR TCA 90 bp TGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATCCCCTGAAGGGCTGTCCGAGCGCCACTTaGGGGCGTGGTCCTTGTGGG +
Preference number: 4 (lower is better)
Translates to: WQRAGWEGVLHSGHPLKGCPSAT*GRGPCG
Trigger: CCCACAAGGACCACGCCCTCAAGTGGCGCTCGGACA...GCCCTTCAGGGGATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR GCA 90 bp TGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATCCCCTGAAGGGCGTGCAGGCGGACCCCTaGCAGCTGCAGCAGCTTGTG +
Preference number: 4 (lower is better)
Translates to: WQRAGWEGVLHSGHPLKGVQADP*QLQQLV
Trigger: CACAAGCTGCTGCAGCTGGCAGGGGTCCGCCTGCAC...GCCCTTCAGGGGATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR GCA 90 bp TGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATCCCCTGAAGGGCTCTACGCCTTCGGCCTaGCCTTCCAGGGGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: WQRAGWEGVLHSGHPLKGSTPSA*PSRGLL
Trigger: CAGCAGCCCCCTGGAAGGGCAGGCCGAAGGCGTAGA...GCCCTTCAGGGGATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR GCA 90 bp AGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATCCCCTGAAGAGGCAGCCCCTCGCTaGAGCCCCCGCATGAGGCGG +
Preference number: 4 (lower is better)
Translates to: RLATGRLGRRPSQWPSPEEAAPR*SPRMRR
Trigger: CCGCCTCATGCGGGGGCTGCAGCGAGGGGCTGCCTC...TTCAGGGGATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR GCA 90 bp TTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATCCCCTGAAGGGCCCGTCAGCCCCTTCTaGTCATGGCCCCGCGATGCC +
Preference number: 4 (lower is better)
Translates to: LATGRLGRRPSQWPSPEGPVSPF*SWPRDA
Trigger: GGCATCGCGGGGCCATGAGCAGAAGGGGCTGACGGG...CCCTTCAGGGGATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR GCA 90 bp CCTCTCACAGCAGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCGCCGGGCCCGTGGGCTaGAGCTCTTGGGAGGCTCAG +
Preference number: 4 (lower is better)
Translates to: PLTADWQRAGWEGVLHSGAGPVG*SSWEAQ
Trigger: CTGAGCCTCCCAAGAGCTGCAGCCCACGGGCCCGGC...GCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCTGCTGTGAGAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR CCA 90 bp CTCACAGCAGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATTCCACCGGCGGCGCCTaGCTTGGGTCCCGCACTGCC +
Preference number: 4 (lower is better)
Translates to: LTADWQRAGWEGVLHSGHSTGGA*LGSRTA
Trigger: GGCAGTGCGGGACCCAAGCCAGGCGCCGCCGGTGGA...ATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCTGCTGTGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp TTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATCCCCTGAAGGGGCTCAGCAGGTACGGTaGCCAGGCGCAGTAGGGCGG +
Preference number: 4 (lower is better)
Translates to: LATGRLGRRPSQWPSPEGAQQVR*PGAVGR
Trigger: CCGCCCTACTGCGCCTGGCCACCGTACCTGCTGAGC...CCCTTCAGGGGATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp GGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGAAGGCAGCAGTGTGGGCTCAGCAGGTACGGTaGCCAGGCGCAGTAGGGCGG +
Preference number: 4 (lower is better)
Translates to: GWGPRVQKPPSWEKAAVWAQQVR*PGAVGR
Trigger: CCGCCCTACTGCGCCTGGCCACCGTACCTGCTGAGC...CCACACTGCTGCCTTCTCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp TTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGAAGGGCCGCAGGTCGGCAATaGGGAAGCGCAGCCGCAGCG +
Preference number: 4 (lower is better)
Translates to: LAEWDGVRGSKSLRPGRRAAGRQ*GSAAAA
Trigger: CGCTGCGGCTGCGCTTCCCCATTGCCGACCTGCGGC...CCTTCTCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp TGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGAAGGCCAGGTGGGTGGGGACTaGGGGACCAGGCCCACTGCT +
Preference number: 4 (lower is better)
Translates to: WLSGMGSEGPKASVLGEGQVGGD*GTRPTA
Trigger: AGCAGTGGGCCTGGTCCCCCAGTCCCCACCCACCTG...GCCTTCTCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp GGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGAAGGCAGCAGTGTGGGCAGTGGACAACATGTaGGGTCCCCGGCCCTGGCCC +
Preference number: 4 (lower is better)
Translates to: GWGPRVQKPPSWEKAAVWAVDNM*GPRPWP
Trigger: GGGCCAGGGCCGGGGACCCCACATGTTGTCCACTGC...CCACACTGCTGCCTTCTCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp TGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATCCCCTGAAGGGCCTCTCCGAGAGCTTCTaGCCGGCGATCTCCGTGGGG +
Preference number: 4 (lower is better)
Translates to: WQRAGWEGVLHSGHPLKGLSESF*PAISVG
Trigger: CCCCACGGAGATCGCCGGCCAGAAGCTCTCGGAGAG...GCCCTTCAGGGGATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377264.8
CDS-3UTR CCA 90 bp AGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATCCCCTGAAGCCCTGTGGCCGGGGTaGGGGCCAAAGTCTCGGCCC +
Preference number: 4 (lower is better)
Translates to: RLATGRLGRRPSQWPSPEALWPG*GPKSRP
Trigger: GGGCCGAGACTTTGGCCCCCACCCCGGCCACAGGGC...TTCAGGGGATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp CTCACAGCAGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATCCTCCAGCTCCTGGCTaGGGGCCGCAGGGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: LTADWQRAGWEGVLHSGHPPAPG*GPQGLW
Trigger: CCACAGGCCCTGCGGCCCCCAGCCAGGAGCTGGAGG...ATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCTGCTGTGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp TGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATCCCCTGAAGGGCAGCGGAGGTCTCCCCTaGGACCACGGGGTTGATGCC +
Preference number: 4 (lower is better)
Translates to: WQRAGWEGVLHSGHPLKGSGGLP*DHGVDA
Trigger: GGCATCAACCCCGTGGTCCCAGGGGAGACCTCCGCT...GCCCTTCAGGGGATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR TCA 90 bp TTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATCCCCTGAAGGGTGGCCACAGCCATCGTaGCATCTCGGAGACCGCCGG +
Preference number: 4 (lower is better)
Translates to: LATGRLGRRPSQWPSPEGWPQPS*HLGDRR
Trigger: CCGGCGGTCTCCGAGATGTCACGATGGCTGTGGCCA...CCCTTCAGGGGATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000421419.3
CDS-3UTR TCA 90 bp TGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGAAGGCTGGCCACAGCCATCGTaGCATCTCGGAGACCGCCGG +
Preference number: 4 (lower is better)
Translates to: WLSGMGSEGPKASVLGEGWPQPS*HLGDRR
Trigger: CCGGCGGTCTCCGAGATGTCACGATGGCTGTGGCCA...GCCTTCTCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000421419.3
CDS-3UTR TCA 90 bp TTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATCCCCTGAAGGGGCAATGGCAGGCAACTaGGCGCCGGGGTCGGCTCTT +
Preference number: 4 (lower is better)
Translates to: LATGRLGRRPSQWPSPEGAMAGN*APGSAL
Trigger: AAGAGCCGACCCCGGCGCTCAGTTGCCTGCCATTGC...CCCTTCAGGGGATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR TCA 90 bp TGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATCCCCTGAAGGGCGTAGGTCGGAGCAGGTaGGTTCCAGGTGGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: WQRAGWEGVLHSGHPLKGVGRSR*VPGGWG
Trigger: TCCCCACCCACCTGGAACTCACCTGCTCCGACCTAC...GCCCTTCAGGGGATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR TCA 90 bp AGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATCCCCTGAAGTCGTGCCAGAAGCCTaGGGGGCCGGGGAAGCCCGA +
Preference number: 4 (lower is better)
Translates to: RLATGRLGRRPSQWPSPEVVPEA*GAGEAR
Trigger: TCGGGCTTCCCCGGCCCCTCAGGCTTCTGGCACGAC...TTCAGGGGATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR TCA 90 bp TTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATCCCCTGAAGGGATGGTTGGGGCCAGCTaGGCCGGGGGAGCGAAACTG +
Preference number: 4 (lower is better)
Translates to: LATGRLGRRPSQWPSPEGMVGAS*AGGAKL
Trigger: CAGTTTCGCTCCCCCGGCTCAGCTGGCCCCAACCAT...CCCTTCAGGGGATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR TCA 90 bp AGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATCCCCTGAAAGGGAGGTGGCCACCTaGAGGCTGGGCCAGCTCCCG +
Preference number: 4 (lower is better)
Translates to: RLATGRLGRRPSQWPSPEREVAT*RLGQLP
Trigger: CGGGAGCTGGCCCAGCCTTCAGGTGGCCACCTCCCT...TTCAGGGGATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR TCA 90 bp AGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATCCCCTGAACCCCTGCGTGCGCCATaGGTTCTGGGGCCGGTTGGG +
Preference number: 4 (lower is better)
Translates to: RLATGRLGRRPSQWPSPEPLRAP*VLGPVG
Trigger: CCCAACCGGCCCCAGAACTCATGGCGCACGCAGGGG...TTCAGGGGATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR TCA 90 bp TGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGAAGGCCCTCCGTGGCCAGGATaGGCGGCTTCACCACAGTCG +
Preference number: 4 (lower is better)
Translates to: WLSGMGSEGPKASVLGEGPPWPG*AASPQS
Trigger: CGACTGTGGTGAAGCCGCTCATCCTGGCCACGGAGG...GCCTTCTCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR TCA 90 bp TTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATCCCCTGAAGGGCCTCCGTGGCCAGGATaGGCGGCTTCACCACAGTCG +
Preference number: 4 (lower is better)
Translates to: LATGRLGRRPSQWPSPEGPPWPG*AASPQS
Trigger: CGACTGTGGTGAAGCCGCTCATCCTGGCCACGGAGG...CCCTTCAGGGGATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR GCA 90 bp GACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAAGCTCCAGCCGAAGCTaGTCAGCCCGCACGGCCTGG +
Preference number: 4 (lower is better)
Translates to: DTWLSGMGSEGPKASVLGSSSRS*SARTAW
Trigger: CCAGGCCGTGCGGGCTGAGCAGCTTCGGCTGGAGCT...TCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR GCA 90 bp CCCCCTCTCACAGCAGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTCCAGCTCCCGTAGGCTaGGCTCGGTGTCCAGGAGGG +
Preference number: 4 (lower is better)
Translates to: PPLTADWQRAGWEGVLHSPAPVG*ARCPGG
Trigger: CCCTCCTGGACACCGAGCGCAGCCTACGGGAGCTGG...ACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCTGCTGTGAGAGGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR GCA 90 bp TGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATCCCCTGAAGGGCACGATGGGGCCGGGATaGAGCTGTGTCACCACAGGC +
Preference number: 4 (lower is better)
Translates to: WQRAGWEGVLHSGHPLKGTMGPG*SCVTTG
Trigger: GCCTGTGGTGACACAGCTGCATCCCGGCCCCATCGT...GCCCTTCAGGGGATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR GCA 90 bp TGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGAAGGCGCGGGAGACGGGGGCTaGCGGGGACAGGATGTCATA +
Preference number: 4 (lower is better)
Translates to: WLSGMGSEGPKASVLGEGAGDGG*RGQDVI
Trigger: TATGACATCCTGTCCCCGGCAGCCCCCGTCTCCCGC...GCCTTCTCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR GCA 90 bp TTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGAAGGCCCGTCAGCCCCTTCTaGTCATGGCCCCGCGATGCC +
Preference number: 4 (lower is better)
Translates to: LAEWDGVRGSKSLRPGRRPVSPF*SWPRDA
Trigger: GGCATCGCGGGGCCATGAGCAGAAGGGGCTGACGGG...CCTTCTCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR CCA 90 bp TGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATCCCCTGAAGGGCTCCCGCAGACACTCCTaGGCCAGCTGCAGGCTTGTG +
Preference number: 4 (lower is better)
Translates to: WQRAGWEGVLHSGHPLKGSRRHS*ASCRLV
Trigger: CACAAGCCTGCAGCTGGCCCAGGAGTGTCTGCGGGA...GCCCTTCAGGGGATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377264.8
CDS-3UTR CCA 90 bp CCCCCAGACACAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCGCAGCCGCAGCGTaGCCCGGGGTGCAGAGAGCC +
Preference number: 4 (lower is better)
Translates to: PPDTERHLAEWDGVRGSKSAAAA*PGVQRA
Trigger: GGCTCTCTGCACCCCGGGCCACGCTGCGGCTGCGCT...TTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTGTGTCTGGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp GACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGACAGGTGGGTGGGGACTaGGGGACCAGGCCCACTGCT +
Preference number: 4 (lower is better)
Translates to: DTWLSGMGSEGPKASVLGQVGGD*GTRPTA
Trigger: AGCAGTGGGCCTGGTCCCCCAGTCCCCACCCACCTG...TCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp GACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGACGCAGGGCCTGTGGCTaGCTCCGCTGGGTACACCTC +
Preference number: 4 (lower is better)
Translates to: DTWLSGMGSEGPKASVLGRRACG*LRWVHL
Trigger: GAGGTGTACCCAGCGGAGCCAGCCACAGGCCCTGCG...TCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp TTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATCCCCTGAAGGGGGACAACCGAGTGCATaGGGCCCACGCCTCCCAGCA +
Preference number: 4 (lower is better)
Translates to: LATGRLGRRPSQWPSPEGGQPSA*GPRLPA
Trigger: TGCTGGGAGGCGTGGGCCCCATGCACTCGGTTGTCC...CCCTTCAGGGGATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR CCA 90 bp TGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGAAGGCGGACAACCGAGTGCATaGGGCCCACGCCTCCCAGCA +
Preference number: 4 (lower is better)
Translates to: WLSGMGSEGPKASVLGEGGQPSA*GPRLPA
Trigger: TGCTGGGAGGCGTGGGCCCCATGCACTCGGTTGTCC...GCCTTCTCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR CCA 90 bp CCTCTCACAGCAGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCGCCACTTGAGGGCGTaGTCCTTGTGGGCGTCGGGG +
Preference number: 4 (lower is better)
Translates to: PLTADWQRAGWEGVLHSGRHLRA*SLWASG
Trigger: CCCCGACGCCCACAAGGACCACGCCCTCAAGTGGCG...GCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCTGCTGTGAGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR TCA 90 bp CCCCCTCTCACAGCAGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTATGGTTGGGGCCAGCTaGGCCGGGGGAGCGAAACTG +
Preference number: 4 (lower is better)
Translates to: PPLTADWQRAGWEGVLHSMVGAS*AGGAKL
Trigger: CAGTTTCGCTCCCCCGGCTCAGCTGGCCCCAACCAT...ACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCTGCTGTGAGAGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR TCA 90 bp TGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATCCCCTGAAGGGCCGTACTGGAGCAGGTTaGCCAGCAGGGCACAGGAGT +
Preference number: 4 (lower is better)
Translates to: WQRAGWEGVLHSGHPLKGRTGAG*PAGHRS
Trigger: ACTCCTGTGCCCTGCTGGTCAACCTGCTCCAGTACG...GCCCTTCAGGGGATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR TCA 90 bp TGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGAAGGCGTTGGGCCAGGCCGATaGGGAGGCCAGCAAAAGTGC +
Preference number: 4 (lower is better)
Translates to: WLSGMGSEGPKASVLGEGVGPGR*GGQQKC
Trigger: GCACTTTTGCTGGCCTCCTCATCGGCCTGGCCCAAC...GCCTTCTCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR TCA 90 bp GGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGAAGGCAGCAGTGTGGCCTGCAGCCACTCGTTaGGGGCATAGCCCAGCACCT +
Preference number: 4 (lower is better)
Translates to: GWGPRVQKPPSWEKAAVWPAATR*GHSPAP
Trigger: AGGTGCTGGGCTATGCCCTCAACGAGTGGCTGCAGG...CCACACTGCTGCCTTCTCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR TCA 90 bp CTCACAGCAGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATGCTGCAGCCCCCGCATaGGGCGGCCATCCTTCCTGT +
Preference number: 4 (lower is better)
Translates to: LTADWQRAGWEGVLHSGHAAAPA*GGHPSC
Trigger: ACAGGAAGGATGGCCGCCTCATGCGGGGGCTGCAGC...ATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCTGCTGTGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR TCA 90 bp TTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATCCCCTGAAGGGGTACCAACCGGTTGCTaGGTTCCAGGGCGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: LATGRLGRRPSQWPSPEGVPTGC*VPGRQR
Trigger: CCTCTGCCGCCCTGGAACTCAGCAACCGGTTGGTAC...CCCTTCAGGGGATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR TCA 90 bp CCTCTCACAGCAGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCTGTCCGAGCGCCACTTaGGGGCGTGGTCCTTGTGGG +
Preference number: 4 (lower is better)
Translates to: PLTADWQRAGWEGVLHSGCPSAT*GRGPCG
Trigger: CCCACAAGGACCACGCCCTCAAGTGGCGCTCGGACA...GCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCTGCTGTGAGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR TCA 90 bp TGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGAAGGCAGCAGTGTTGTCCGAGCGCCACTTaGGGGCGTGGTCCTTGTGGG +
Preference number: 4 (lower is better)
Translates to: WDGVRGSKSLRPGRRQQCCPSAT*GRGPCG
Trigger: CCCACAAGGACCACGCCCTCAAGTGGCGCTCGGACA...ACACTGCTGCCTTCTCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR TCA 90 bp ACAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTACAGTGGCCATCCCCTaGAGGGCCAGGCCGGGCCGG +
Preference number: 4 (lower is better)
Translates to: TERHLAEWDGVRGSKSLRTVAIP*RARPGR
Trigger: CCGGCCCGGCCTGGCCCTTCAGGGGATGGCCACTGT...ACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR TCA 90 bp TTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATCCCCTGAAGGGCCTGCAGCCACTCGTTaGGGGCATAGCCCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: LATGRLGRRPSQWPSPEGPAATR*GHSPAL
Trigger: CAGAGCTGGGCTATGCCCTCAACGAGTGGCTGCAGG...CCCTTCAGGGGATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421419.3
CDS-3UTR GCA 90 bp CCTCTCACAGCAGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCGCCACTGCCCCTGCCTaGAGCTGCTGGTTCAGGTCC +
Preference number: 4 (lower is better)
Translates to: PLTADWQRAGWEGVLHSGATAPA*SCWFRS
Trigger: GGACCTGAACCAGCAGCTGCAGGCAGGGGCAGTGGC...GCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCTGCTGTGAGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR GCA 90 bp AGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATCCCCTGAAAGCTCCAGCCGAAGCTaGTCAGCCCGCACGGCCTGG +
Preference number: 4 (lower is better)
Translates to: RLATGRLGRRPSQWPSPESSSRS*SARTAW
Trigger: CCAGGCCGTGCGGGCTGAGCAGCTTCGGCTGGAGCT...TTCAGGGGATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR GCA 90 bp TGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGAAGGCAGCAGTGTGCTGCAGCGGGACAGTaGCAGGGTCCGGCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: WDGVRGSKSLRPGRRQQCAAAGQ*QGPALE
Trigger: TTCCAGAGCCGGACCCTGGCACTGTCCCGCTGCAGC...ACACTGCTGCCTTCTCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR GCA 90 bp TTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATCCCCTGAAGGGGGATCACTTCCAGGCTaGAGCGGGACAGTGCCAGGG +
Preference number: 4 (lower is better)
Translates to: LATGRLGRRPSQWPSPEGGSLPG*SGTVPG
Trigger: CCCTGGCACTGTCCCGCTGCAGCCTGGAAGTGATCC...CCCTTCAGGGGATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR GCA 90 bp CCCCCTCTCACAGCAGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTCATCTCGGGGCGGGATaGCCAGGCCGGGAGCATCAA +
Preference number: 4 (lower is better)
Translates to: PPLTADWQRAGWEGVLHSHLGAG*PGREHQ
Trigger: TTGATGCTCCCGGCCTGGGCATCCCGCCCCGAGATG...ACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCTGCTGTGAGAGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR GCA 90 bp TGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGAAGGCCCTCCTGGGGCCTCCTaGGAACCAGTGGTCTCTACG +
Preference number: 4 (lower is better)
Translates to: WLSGMGSEGPKASVLGEGPPGAS*EPVVST
Trigger: CGTAGAGACCACTGGTTCGCAGGAGGCCCCAGGAGG...GCCTTCTCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR GCA 90 bp TGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGAAGGCAGCAGTGTAGCTGGACAACCGAGTaGATGGGGCCCACGCCTCCC +
Preference number: 4 (lower is better)
Translates to: WDGVRGSKSLRPGRRQQCSWTTE*MGPTPP
Trigger: GGGAGGCGTGGGCCCCATGCACTCGGTTGTCCAGCT...ACACTGCTGCCTTCTCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR GCA 90 bp CCCCCTCTCACAGCAGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTAGCTGGACAACCGAGTaGATGGGGCCCACGCCTCCC +
Preference number: 4 (lower is better)
Translates to: PPLTADWQRAGWEGVLHSSWTTE*MGPTPP
Trigger: GGGAGGCGTGGGCCCCATGCACTCGGTTGTCCAGCT...ACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCTGCTGTGAGAGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR GCA 90 bp TGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGAAGGCAGCAGTGTGCGGGAGACGGGGGCTaGCGGGGACAGGATGTCATA +
Preference number: 4 (lower is better)
Translates to: WDGVRGSKSLRPGRRQQCAGDGG*RGQDVI
Trigger: TATGACATCCTGTCCCCGGCAGCCCCCGTCTCCCGC...ACACTGCTGCCTTCTCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR GCA 90 bp GACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGCAGAGCGCTTATCCTaGAGGGAGCGGGAGACGGGG +
Preference number: 4 (lower is better)
Translates to: DTWLSGMGSEGPKASVLGAERLS*RERETG
Trigger: CCCCGTCTCCCGCTCCCTGCAGGATAAGCGCTCTGC...TCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR GCA 90 bp CTCACAGCAGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATCCCGTCAGCCCCTTCTaGTCATGGCCCCGCGATGCC +
Preference number: 4 (lower is better)
Translates to: LTADWQRAGWEGVLHSGHPVSPF*SWPRDA
Trigger: GGCATCGCGGGGCCATGAGCAGAAGGGGCTGACGGG...ATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCTGCTGTGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR GCA 90 bp TGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGAAGGCCAATCTGGTTGCGCATaGCCCCGAGCAGGCTGGACG +
Preference number: 4 (lower is better)
Translates to: WLSGMGSEGPKASVLGEGQSGCA*PRAGWT
Trigger: CGTCCAGCCTGCTCGGGGGCATGCGCAACCAGATTG...GCCTTCTCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR GCA 90 bp TTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGAAGGCGGGGACAATCTGGTTaGGCATGCCCCCGAGCAGGC +
Preference number: 4 (lower is better)
Translates to: LAEWDGVRGSKSLRPGRRRGQSG*ACPRAG
Trigger: GCCTGCTCGGGGGCATGCGCAACCAGATTGTCCCCG...CCTTCTCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR CCA 90 bp CCTCTCACAGCAGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCGGCTGCAAGGTGAGCTaGAGGCCGGACACGCGCACT +
Preference number: 4 (lower is better)
Translates to: PLTADWQRAGWEGVLHSGGCKVS*RPDTRT
Trigger: AGTGCGCGTGTCCGGCCTCCAGCTCACCTTGCAGCC...GCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCTGCTGTGAGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000421419.3
CDS-3UTR CCA 90 bp CCCCCAGACACAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAACGGCGGCGCCTGGCTTaGGTCCCGCACTGCCTCATC +
Preference number: 4 (lower is better)
Translates to: PPDTERHLAEWDGVRGSKRRRLA*VPHCLI
Trigger: GATGAGGCAGTGCGGGACCCAAGCCAGGCGCCGCCG...TTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTGTGTCTGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp CAGACACAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCACCGGCGGCGCCTaGCTTGGGTCCCGCACTGCC +
Preference number: 4 (lower is better)
Translates to: QTQKDTWLSGMGSEGPKASTGGA*LGSRTA
Trigger: GGCAGTGCGGGACCCAAGCCAGGCGCCGCCGGTGGA...GGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTGTGTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp GGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGAAGGCAGCAGTGTGGGTTGGTAAGGGGGTCTaGGCTGAGGGGCTCAGCCAC +
Preference number: 4 (lower is better)
Translates to: GWGPRVQKPPSWEKAAVWVGKGV*AEGLSH
Trigger: GTGGCTGAGCCCCTCAGCCCAGACCCCCTTACCAAC...CCACACTGCTGCCTTCTCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp GACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGATGTGTGTGGCGCAGATaGGCGCAGGGCCGAGCTGAG +
Preference number: 4 (lower is better)
Translates to: DTWLSGMGSEGPKASVLGCVWRR*AQGRAE
Trigger: CTCAGCTCGGCCCTGCGCCCATCTGCGCCACACACA...TCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp TGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGAAGGCAGCTCCACGTCCGCCTaGAAGTTGGCCAGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: WLSGMGSEGPKASVLGEGSSTSA*KLARSR
Trigger: CCTGGACCTGGCCAACTTCCAGGCGGACGTGGAGCT...GCCTTCTCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp CAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCGCCGCAGGTCGGCAATaGGGAAGCGCAGCCGCAGCG +
Preference number: 4 (lower is better)
Translates to: QKDTWLSGMGSEGPKASVAAGRQ*GSAAAA
Trigger: CGCTGCGGCTGCGCTTCCCCATTGCCGACCTGCGGC...GACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp CCCCCTCTCACAGCAGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTCGATGGGTAGATGGTTaGGGCCAGCTGAGCCGGGGG +
Preference number: 4 (lower is better)
Translates to: PPLTADWQRAGWEGVLHSRWVDG*GQLSRG
Trigger: CCCCCGGCTCAGCTGGCCCCAACCATCTACCCATCG...ACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCTGCTGTGAGAGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp CTCACAGCAGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATGCAGTGGACAACATGTaGGGTCCCCGGCCCTGGCCC +
Preference number: 4 (lower is better)
Translates to: LTADWQRAGWEGVLHSGHAVDNM*GPRPWP
Trigger: GGGCCAGGGCCGGGGACCCCACATGTTGTCCACTGC...ATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCTGCTGTGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp TGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATCCCCTGAAGGGCGGATGCGCACAGCAGTaGACAACATGTGGGGTCCCC +
Preference number: 4 (lower is better)
Translates to: WQRAGWEGVLHSGHPLKGGCAQQ*TTCGVP
Trigger: GGGGACCCCACATGTTGTCCACTGCTGTGCGCATCC...GCCCTTCAGGGGATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp TGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATCCCCTGAAGGGCTTGTGGGGGTCCAGGTaGATGCGCACAGCAGTGGAC +
Preference number: 4 (lower is better)
Translates to: WQRAGWEGVLHSGHPLKGLWGSR*MRTAVD
Trigger: GTCCACTGCTGTGCGCATCCACCTGGACCCCCACAA...GCCCTTCAGGGGATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp TGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGAAGGCCGTCCCTCACAACGATaGGGCCGGGATGCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: WLSGMGSEGPKASVLGEGRPSQR*GRDAAV
Trigger: CACAGCTGCATCCCGGCCCCATCGTTGTGAGGGACG...GCCTTCTCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp CCTCTCACAGCAGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCCAGTTCTTGCCCTGTaGCCGGGGTGGGGGCCAAAG +
Preference number: 4 (lower is better)
Translates to: PLTADWQRAGWEGVLHSGPVLAL*PGWGPK
Trigger: CTTTGGCCCCCACCCCGGCCACAGGGCAAGAACTGG...GCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCTGCTGTGAGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp TGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGAAGGCGGGAAGGGGAGCTCCTaGGACCTGAGAGGCCAGTTC +
Preference number: 4 (lower is better)
Translates to: WLSGMGSEGPKASVLGEGGKGSS*DLRGQF
Trigger: GAACTGGCCTCTCAGGTCCCAGGAGCTCCCCTTCCC...GCCTTCTCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp TGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGAAGGCATCTCCATGAGGACATaGTGCTGCCGCCCGCTGCCC +
Preference number: 4 (lower is better)
Translates to: WLSGMGSEGPKASVLGEGISMRT*CCRPLP
Trigger: GGGCAGCGGGCGGCAGCACCATGTCCTCATGGAGAT...GCCTTCTCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp CCTCTCACAGCAGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCAGCGGAGGTCTCCCCTaGGACCACGGGGTTGATGCC +
Preference number: 4 (lower is better)
Translates to: PLTADWQRAGWEGVLHSGSGGLP*DHGVDA
Trigger: GGCATCAACCCCGTGGTCCCAGGGGAGACCTCCGCT...GCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCTGCTGTGAGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp CAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCAGGGGGCTGCTGGGCTaGGCTCGAGTCTCGGGGCGA +
Preference number: 4 (lower is better)
Translates to: QKDTWLSGMGSEGPKASVRGLLG*ARVSGR
Trigger: TCGCCCCGAGACTCGAGCCCAGCCCAGCAGCCCCCT...GACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp TTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATCCCCTGAAGGGAGCAGGCCGGGCAGCTaGTTCTTGCGGATGTCCTGC +
Preference number: 4 (lower is better)
Translates to: LATGRLGRRPSQWPSPEGSRPGS*FLRMSC
Trigger: GCAGGACATCCGCAAGAACCAGCTGCCCGGCCTGCT...CCCTTCAGGGGATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR CCA 90 bp TGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGAAGGCGGGCGGCAGAGGCTGTaGATGAGCCAAAGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: WLSGMGSEGPKASVLGEGGRQRL*MSQRRQ
Trigger: CTGCCTCCTTTGGCTCATCCACAGCCTCTGCCGCCC...GCCTTCTCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR CCA 90 bp ACAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTAGGTCGGCAGGCTGCTaGCCCCTGCGCAGCCTCCGC +
Preference number: 4 (lower is better)
Translates to: TERHLAEWDGVRGSKSLRRSAGC*PLRSLR
Trigger: GCGGAGGCTGCGCAGGGGCCAGCAGCCTGCCGACCT...ACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR CCA 90 bp TGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGAAGGCAGCCCCTTCTGCTCATaGCCCCGCGATGCCACGTCA +
Preference number: 4 (lower is better)
Translates to: WLSGMGSEGPKASVLGEGSPFCS*PRDATS
Trigger: TGACGTGGCATCGCGGGGCCATGAGCAGAAGGGGCT...GCCTTCTCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR CCA 90 bp TTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGAAGGGCGTCGGGGACAATCTaGTTGCGCATGCCCCCGAGC +
Preference number: 4 (lower is better)
Translates to: LAEWDGVRGSKSLRPGRRASGTI*LRMPPS
Trigger: GCTCGGGGGCATGCGCAACCAGATTGTCCCCGACGC...CCTTCTCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR CCA 90 bp CCTCTCACAGCAGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCGCGTCGGGGACAATCTaGTTGCGCATGCCCCCGAGC +
Preference number: 4 (lower is better)
Translates to: PLTADWQRAGWEGVLHSGASGTI*LRMPPS
Trigger: GCTCGGGGGCATGCGCAACCAGATTGTCCCCGACGC...GCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCTGCTGTGAGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR CCA 90 bp TGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGAAGGCAGGGCGTGGTCCTTGTaGGCGTCGGGGACAATCTGG +
Preference number: 4 (lower is better)
Translates to: WLSGMGSEGPKASVLGEGRAWSL*ASGTIW
Trigger: CCAGATTGTCCCCGACGCCCACAAGGACCACGCCCT...GCCTTCTCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR CCA 90 bp GACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGACCCCAGGCTCAGTCTTaGGCACTGTCCGAGCGCCAC +
Preference number: 4 (lower is better)
Translates to: DTWLSGMGSEGPKASVLGPQAQS*ALSERH
Trigger: GTGGCGCTCGGACAGTGCCCAAGACTGAGCCTGGGG...TCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR CCA 90 bp CCAGACACAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCGTGGGCAGCACCCTCTaGGTGCCGGGCACCCCAGGC +
Preference number: 4 (lower is better)
Translates to: PDTERHLAEWDGVRGSKSVGSTL*VPGTPG
Trigger: GCCTGGGGTGCCCGGCACCCAGAGGGTGCTGCCCAC...GCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTGTGTCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR CCA 90 bp TGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATCCCCTGAAGGGCTGGCAACGGGCAGGCTaGGAAGGCGTCCTTCACAGT +
Preference number: 4 (lower is better)
Translates to: WQRAGWEGVLHSGHPLKGWQRAG*EGVLHS
Trigger: ACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCA...GCCCTTCAGGGGATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR CCA 90 bp GGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGAAGGCAGCAGTGTGGGAGAGCTGTACCTTCTaGCCGGCGATCTCCGTGGGG +
Preference number: 4 (lower is better)
Translates to: GWGPRVQKPPSWEKAAVWESCTF*PAISVG
Trigger: CCCCACGGAGATCGCCGGCCAGAAGGTACAGCTCTC...CCACACTGCTGCCTTCTCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418259.5
CDS-3UTR TCA 90 bp GGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGAAGGCAGCAGTGTGGGCGCTGAGCAGTTCCTaGAGTTGCTGGAGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: GWGPRVQKPPSWEKAAVWALSSS*SCWSCL
Trigger: GAGGCAGCTCCAGCAACTTCAGGAACTGCTCAGCGC...CCACACTGCTGCCTTCTCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR TCA 90 bp TGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATCCCCTGAAGGGCGATGGGGCAGACGTCTaGAGCAAGGTCAGGGTCACA +
Preference number: 4 (lower is better)
Translates to: WQRAGWEGVLHSGHPLKGDGADV*SKVRVT
Trigger: TGTGACCCTGACCTTGCTTCAGACGTCTGCCCCATC...GCCCTTCAGGGGATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR TCA 90 bp CCCCCTCTCACAGCAGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGTAGGTCGGAGCAGGTaGGTTCCAGGTGGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: PPLTADWQRAGWEGVLHSVGRSR*VPGGWG
Trigger: TCCCCACCCACCTGGAACTCACCTGCTCCGACCTAC...ACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCTGCTGTGAGAGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR TCA 90 bp AGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATCCCCTGAAGAGATGGGCGACGCCTaGGGGAGGTGGCCACCTGAA +
Preference number: 4 (lower is better)
Translates to: RLATGRLGRRPSQWPSPEEMGDA*GRWPPE
Trigger: TTCAGGTGGCCACCTCCCTCAGGCGTCGCCCATCTC...TTCAGGGGATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR TCA 90 bp GGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGAAGGCAGCAGTGTGGTCAGCTGGATCTCCATaGGGACATGGTGCTGCCGCC +
Preference number: 4 (lower is better)
Translates to: GWGPRVQKPPSWEKAAVWSAGSP*GHGAAA
Trigger: GGCGGCAGCACCATGTCCTCATGGAGATCCAGCTGA...CCACACTGCTGCCTTCTCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR TCA 90 bp GACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGATGCACGATGAACACCTaGCGGGACAGCGGTCGCTCC +
Preference number: 4 (lower is better)
Translates to: DTWLSGMGSEGPKASVLGCTMNT*RDSGRS
Trigger: GGAGCGACCGCTGTCCCGTCAGGTGTTCATCGTGCA...TCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR TCA 90 bp TGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGAAGGCAGCAGTGTCCAGCTCCTGCACGATaGACACCTGACGGGACAGCG +
Preference number: 4 (lower is better)
Translates to: WDGVRGSKSLRPGRRQQCPAPAR*TPDGTA
Trigger: CGCTGTCCCGTCAGGTGTTCATCGTGCAGGAGCTGG...ACACTGCTGCCTTCTCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR TCA 90 bp CCCCCTCTCACAGCAGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTCATCCTGGTCCACATTaGGCCGCAGGGGCATCAGCG +
Preference number: 4 (lower is better)
Translates to: PPLTADWQRAGWEGVLHSHPGPH*AAGASA
Trigger: CGCTGATGCCCCTGCGGCTCAATGTGGACCAGGATG...ACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCTGCTGTGAGAGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR TCA 90 bp TGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGAAGGCAGCAGTGTCATCCTGGTCCACATTaGGCCGCAGGGGCATCAGCG +
Preference number: 4 (lower is better)
Translates to: WDGVRGSKSLRPGRRQQCHPGPH*AAGASA
Trigger: CGCTGATGCCCCTGCGGCTCAATGTGGACCAGGATG...ACACTGCTGCCTTCTCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR TCA 90 bp TTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGAAGGGTTGGGCCAGGCCGATaGGGAGGCCAGCAAAAGTGC +
Preference number: 4 (lower is better)
Translates to: LAEWDGVRGSKSLRPGRRVGPGR*GGQQKC
Trigger: GCACTTTTGCTGGCCTCCTCATCGGCCTGGCCCAAC...CCTTCTCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR TCA 90 bp CAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCGCTGCAGCCCCCGCATaGGGCGGCCATCCTTCCTGT +
Preference number: 4 (lower is better)
Translates to: QKDTWLSGMGSEGPKASVAAAPA*GGHPSC
Trigger: ACAGGAAGGATGGCCGCCTCATGCGGGGGCTGCAGC...GACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR TCA 90 bp CTCACAGCAGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATCCTCCGTGGCCAGGATaGGCGGCTTCACCACAGTCG +
Preference number: 4 (lower is better)
Translates to: LTADWQRAGWEGVLHSGHPPWPG*AASPQS
Trigger: CGACTGTGGTGAAGCCGCTCATCCTGGCCACGGAGG...ATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCTGCTGTGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR GCA 90 bp GGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGAAGGCAGCAGTGTGGTGGAGGCTCTTCCTGTaGCGGGAGCTCCTCGTAGTG +
Preference number: 4 (lower is better)
Translates to: GWGPRVQKPPSWEKAAVWWRLFL*RELLVV
Trigger: CACTACGAGGAGCTCCCGGCACAGGAAGAGCCTCCA...CCACACTGCTGCCTTCTCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR GCA 90 bp CAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCGGTTGGGGGCCATCTTaGCAGCTGGGTGGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: QKDTWLSGMGSEGPKASVGWGPS*QLGGPG
Trigger: CCCAGGCCCACCCAGCTGGCAAGATGGCCCCCAACC...GACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR GCA 90 bp GACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGACGAAGTGCACTTCCATaGTGGTTGTCCGCCGGCCCC +
Preference number: 4 (lower is better)
Translates to: DTWLSGMGSEGPKASVLGRSALP*WLSAGP
Trigger: GGGGCCGGCGGACAACCAGCATGGAAGTGCACTTCG...TCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR GCA 90 bp CCCCCTCTCACAGCAGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTACTCAGGCTCAGAGGTaGCCCGGGGCCACAGACACT +
Preference number: 4 (lower is better)
Translates to: PPLTADWQRAGWEGVLHSTQAQR*PGATDT
Trigger: AGTGTCTGTGGCCCCGGGGCACCTCTGAGCCTGAGT...ACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCTGCTGTGAGAGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR GCA 90 bp GACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGACGAAATACCGTCTGCTaGTCCATCGCCGGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: DTWLSGMGSEGPKASVLGRNTVC*SIAGRG
Trigger: GCCCCTGCCGGCGATGGAGCAGCAGACGGTATTTCG...TCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR GCA 90 bp CCCCCTCTCACAGCAGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTAGCATGACCCTAAGCTaGCAGCAGGGCCCCCGACAG +
Preference number: 4 (lower is better)
Translates to: PPLTADWQRAGWEGVLHSSMTLS*QQGPRQ
Trigger: CTGTCGGGGGCCCTGCTGGCAGCTTAGGGTCATGCT...ACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCTGCTGTGAGAGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR GCA 90 bp CTCACAGCAGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATCCCGCAGCAAGTCCGTaGTGCCGATCGGCCGTGAGA +
Preference number: 4 (lower is better)
Translates to: LTADWQRAGWEGVLHSGHPAASP*CRSAVR
Trigger: TCTCACGGCCGATCGGCAGCACGGACTTGCTGCGGG...ATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCTGCTGTGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR GCA 90 bp CTCACAGCAGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATTCTACGCCTTCGGCCTaGCCTTCCAGGGGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: LTADWQRAGWEGVLHSGHSTPSA*PSRGLL
Trigger: CAGCAGCCCCCTGGAAGGGCAGGCCGAAGGCGTAGA...ATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCTGCTGTGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR GCA 90 bp CTCACAGCAGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATGCAGAGCGCTTATCCTaGAGGGAGCGGGAGACGGGG +
Preference number: 4 (lower is better)
Translates to: LTADWQRAGWEGVLHSGHAERLS*RERETG
Trigger: CCCCGTCTCCCGCTCCCTGCAGGATAAGCGCTCTGC...ATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCTGCTGTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR GCA 90 bp CCCCCTCTCACAGCAGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTCAATCTGGTTGCGCATaGCCCCGAGCAGGCTGGACG +
Preference number: 4 (lower is better)
Translates to: PPLTADWQRAGWEGVLHSQSGCA*PRAGWT
Trigger: CGTCCAGCCTGCTCGGGGGCATGCGCAACCAGATTG...ACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCTGCTGTGAGAGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR GCA 90 bp CAGACACAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCGCCGGGCCCGTGGGCTaGAGCTCTTGGGAGGCTCAG +
Preference number: 4 (lower is better)
Translates to: QTQKDTWLSGMGSEGPKAAGPVG*SSWEAQ
Trigger: CTGAGCCTCCCAAGAGCTGCAGCCCACGGGCCCGGC...GGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTGTGTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR GCA 90 bp TGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGAAGGCTCCCCGGAGGAAAAGTaGAGAGCCAGGGCTAAGGCC +
Preference number: 4 (lower is better)
Translates to: WLSGMGSEGPKASVLGEGSPEEK*RARAKA
Trigger: GGCCTTAGCCCTGGCTCTGCACTTTTCCTCCGGGGA...GCCTTCTCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR CCA 90 bp GGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGAAGGCAGCAGTGTGGCCAGCTGCAGGCTTGTaGTCATGCATGAGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: GWGPRVQKPPSWEKAAVWPAAGL*SCMRPS
Trigger: GCTGGGCCTCATGCATGACCACAAGCCTGCAGCTGG...CCACACTGCTGCCTTCTCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377264.8
CDS-3UTR CCA 90 bp CCTCTCACAGCAGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCCGCCACCTCCAACTTaGGGCCAGGGAAGGCCTCAT +
Preference number: 4 (lower is better)
Translates to: PLTADWQRAGWEGVLHSGPPPPT*GQGRPH
Trigger: ATGAGGCCTTCCCTGGCCCCAAGTTGGAGGTGGCGG...GCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCTGCTGTGAGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp CCTCTCACAGCAGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCTCAGCCAGGCCCTCGTaGTCTGTAAGGCTCACGGCG +
Preference number: 4 (lower is better)
Translates to: PLTADWQRAGWEGVLHSGSARPS*SVRLTA
Trigger: CGCCGTGAGCCTTACAGACCACGAGGGCCTGGCTGA...GCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCTGCTGTGAGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp CTCACAGCAGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATGCGAGTCAGGGCGCATaGTGTCCAGGAGGGGGTTGG +
Preference number: 4 (lower is better)
Translates to: LTADWQRAGWEGVLHSGHASQGA*CPGGGW
Trigger: CCAACCCCCTCCTGGACACCATGCGCCCTGACTCGC...ATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCTGCTGTGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp GACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGACGTGGCGAGGTCAGGTaGTCCGGAAGATGGGGCAGA +
Preference number: 4 (lower is better)
Translates to: DTWLSGMGSEGPKASVLGRGEVR*SGRWGR
Trigger: TCTGCCCCATCTTCCGGACCACCTGACCTCGCCACG...TCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp GGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGAAGGCAGCAGTGTGGCCCGTTAGCCGAACATaGCTACAGGGACAGGCCCTC +
Preference number: 4 (lower is better)
Translates to: GWGPRVQKPPSWEKAAVWPVSRT*LQGQAL
Trigger: GAGGGCCTGTCCCTGTAGCCATGTTCGGCTAACGGG...CCACACTGCTGCCTTCTCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp TTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGAAGGAGTGCACTTCCATGCTaGTTGTCCGCCGGCCCCGAC +
Preference number: 4 (lower is better)
Translates to: LAEWDGVRGSKSLRPGRRSALPC*LSAGPD
Trigger: GTCGGGGCCGGCGGACAACCAGCATGGAAGTGCACT...CCTTCTCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp CTCACAGCAGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATCGCAGGATCTGTGTGTaGCGCAGATGGGCGCAGGGC +
Preference number: 4 (lower is better)
Translates to: LTADWQRAGWEGVLHSGHRRICV*RRWAQG
Trigger: GCCCTGCGCCCATCTGCGCCACACACAGATCCTGCG...ATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCTGCTGTGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp TGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGAAGGCAGCAGTGTCAGGTGAGTTCCAGGTaGGTGGGGACTGGGGGACCA +
Preference number: 4 (lower is better)
Translates to: WDGVRGSKSLRPGRRQQCQVSSR*VGTGGP
Trigger: TGGTCCCCCAGTCCCCACCCACCTGGAACTCACCTG...ACACTGCTGCCTTCTCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp TGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGAAGGCTGCGCCCAGTGCTCTTaGGGTCCAGGGCTTTGGAGA +
Preference number: 4 (lower is better)
Translates to: WLSGMGSEGPKASVLGEGCAQCS*GPGLWR
Trigger: TCTCCAAAGCCCTGGACCCCAAGAGCACTGGGCGCA...GCCTTCTCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp TGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATCCCCTGAAGGGCCCCACTGTGTGCTGCTaGACTGGGGGTTCACAGTCA +
Preference number: 4 (lower is better)
Translates to: WQRAGWEGVLHSGHPLKGPTVCC*TGGSQS
Trigger: TGACTGTGAACCCCCAGTCCAGCAGCACACAGTGGG...GCCCTTCAGGGGATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp GGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGAAGGCAGCAGTGTGGCACCCCTTCCTCCGATaGGTAGATGGTTGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: GWGPRVQKPPSWEKAAVWHPFLR*VDGWGQ
Trigger: CTGGCCCCAACCATCTACCCATCGGAGGAAGGGGTG...CCACACTGCTGCCTTCTCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp TTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGAAGGTCGGCCAGGTCACGCTaGTTGATGAGGGCCGTCTCC +
Preference number: 4 (lower is better)
Translates to: LAEWDGVRGSKSLRPGRRSARSR*LMRAVS
Trigger: GGAGACGGCCCTCATCAACCAGCGTGACCTGGCCGA...CCTTCTCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp CCTCTCACAGCAGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCATCTCCATGAGGACATaGTGCTGCCGCCCGCTGCCC +
Preference number: 4 (lower is better)
Translates to: PLTADWQRAGWEGVLHSGISMRT*CCRPLP
Trigger: GGGCAGCGGGCGGCAGCACCATGTCCTCATGGAGAT...GCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCTGCTGTGAGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp CCAGACACAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCGGGCCGCAGGGCCTGTaGCTGGCTCCGCTGGGTACA +
Preference number: 4 (lower is better)
Translates to: PDTERHLAEWDGVRGSKSGPQGL*LAPLGT
Trigger: TGTACCCAGCGGAGCCAGCCACAGGCCCTGCGGCCC...GCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTGTGTCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp CCCCCAGACACAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAACTTCCAGGGGGCTGCTaGGCTGGGCTCGAGTCTCGG +
Preference number: 4 (lower is better)
Translates to: PPDTERHLAEWDGVRGSKLPGGC*AGLESR
Trigger: CCGAGACTCGAGCCCAGCCCAGCAGCCCCCTGGAAG...TTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTGTGTCTGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp CCTCTCACAGCAGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCGGGCGGCAGAGGCTGTaGATGAGCCAAAGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: PLTADWQRAGWEGVLHSGGRQRL*MSQRRQ
Trigger: CTGCCTCCTTTGGCTCATCCACAGCCTCTGCCGCCC...GCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCTGCTGTGAGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR CCA 90 bp TTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGAAGGGGGCGGCAGAGGCTGTaGATGAGCCAAAGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: LAEWDGVRGSKSLRPGRRGRQRL*MSQRRQ
Trigger: CTGCCTCCTTTGGCTCATCCACAGCCTCTGCCGCCC...CCTTCTCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR CCA 90 bp TTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGAAGGCTGTGTCGTAGGCCTTaGCCACACCCTCCCGCAGGT +
Preference number: 4 (lower is better)
Translates to: LAEWDGVRGSKSLRPGRRLCRRP*PHPPAG
Trigger: ACCTGCGGGAGGGTGTGGCCAAGGCCTACGACACAG...CCTTCTCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR CCA 90 bp CCAGACACAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCTGCCCCCGAGCAGGCTaGACGTGGCCTCCGTGGCCA +
Preference number: 4 (lower is better)
Translates to: PDTERHLAEWDGVRGSKSCPRAG*TWPPWP
Trigger: TGGCCACGGAGGCCACGTCCAGCCTGCTCGGGGGCA...GCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTGTGTCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR CCA 90 bp CCCCCAGACACAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAACGCCACTTGAGGGCGTaGTCCTTGTGGGCGTCGGGG +
Preference number: 4 (lower is better)
Translates to: PPDTERHLAEWDGVRGSKRHLRA*SLWASG
Trigger: CCCCGACGCCCACAAGGACCACGCCCTCAAGTGGCG...TTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTGTGTCTGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR CCA 90 bp CTCACAGCAGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATCCCCAGGCTCAGTCTTaGGCACTGTCCGAGCGCCAC +
Preference number: 4 (lower is better)
Translates to: LTADWQRAGWEGVLHSGHPQAQS*ALSERH
Trigger: GTGGCGCTCGGACAGTGCCCAAGACTGAGCCTGGGG...ATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCTGCTGTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR CCA 90 bp TTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATCCCCTGAAGGGTGGCAACGGGCAGGCTaGGAAGGCGTCCTTCACAGT +
Preference number: 4 (lower is better)
Translates to: LATGRLGRRPSQWPSPEGWQRAG*EGVLHS
Trigger: ACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCA...CCCTTCAGGGGATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR TCA 90 bp TTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATCCCCTGAAGGGCAGCTCCATGTACCCTaGGCAGCTGCCGATCTGCAA +
Preference number: 4 (lower is better)
Translates to: LATGRLGRRPSQWPSPEGQLHVP*AAADLQ
Trigger: TTGCAGATCGGCAGCTGCTCAGGGTACATGGAGCTG...CCCTTCAGGGGATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR TCA 90 bp CCTCTCACAGCAGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCGCGCTGAGCAGTTCCTaGAGTTGCTGGAGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: PLTADWQRAGWEGVLHSGALSSS*SCWSCL
Trigger: GAGGCAGCTCCAGCAACTTCAGGAACTGCTCAGCGC...GCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCTGCTGTGAGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR TCA 90 bp TTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGAAGGGTCCAGGGCCAGTTCTaGGTGGCAATGGCAGGCAAC +
Preference number: 4 (lower is better)
Translates to: LAEWDGVRGSKSLRPGRRVQGQF*VAMAGN
Trigger: GTTGCCTGCCATTGCCACTCAGAACTGGCCCTGGAC...CCTTCTCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR TCA 90 bp CCCCCAGACACAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAGAGATGGGCGACGCCTaGGGGAGGTGGCCACCTGAA +
Preference number: 4 (lower is better)
Translates to: PPDTERHLAEWDGVRGSKEMGDA*GRWPPE
Trigger: TTCAGGTGGCCACCTCCCTCAGGCGTCGCCCATCTC...TTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTGTGTCTGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR TCA 90 bp TTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGAAGGTCAGCTGGATCTCCATaGGGACATGGTGCTGCCGCC +
Preference number: 4 (lower is better)
Translates to: LAEWDGVRGSKSLRPGRRSAGSP*GHGAAA
Trigger: GGCGGCAGCACCATGTCCTCATGGAGATCCAGCTGA...CCTTCTCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR TCA 90 bp CTCACAGCAGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATTGCACGATGAACACCTaGCGGGACAGCGGTCGCTCC +
Preference number: 4 (lower is better)
Translates to: LTADWQRAGWEGVLHSGHCTMNT*RDSGRS
Trigger: GGAGCGACCGCTGTCCCGTCAGGTGTTCATCGTGCA...ATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCTGCTGTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR TCA 90 bp CTCACAGCAGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATCCAGCTCCTGCACGATaGACACCTGACGGGACAGCG +
Preference number: 4 (lower is better)
Translates to: LTADWQRAGWEGVLHSGHPAPAR*TPDGTA
Trigger: CGCTGTCCCGTCAGGTGTTCATCGTGCAGGAGCTGG...ATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCTGCTGTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR TCA 90 bp TGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGAAGGCGGTACAGGAACTTGTTaGTCTGGGAGGAGGCGAGCC +
Preference number: 4 (lower is better)
Translates to: WLSGMGSEGPKASVLGEGGTGTC*SGRRRA
Trigger: GGCTCGCCTCCTCCCAGATCAACAAGTTCCTGTACC...GCCTTCTCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR TCA 90 bp TGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATCCCCTGAAGGGCCCACCTGGTCCATCGTaGCGTGCTTGCCATGGTAAT +
Preference number: 4 (lower is better)
Translates to: WQRAGWEGVLHSGHPLKGPPGPS*RACHGN
Trigger: ATTACCATGGCAAGCACGTCACGATGGACCAGGTGG...GCCCTTCAGGGGATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR TCA 90 bp CCAGACACAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCGCTGCAGCCCCCGCATaGGGCGGCCATCCTTCCTGT +
Preference number: 4 (lower is better)
Translates to: PDTERHLAEWDGVRGSKSAAAPA*GGHPSC
Trigger: ACAGGAAGGATGGCCGCCTCATGCGGGGGCTGCAGC...GCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTGTGTCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR TCA 90 bp TTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATCCCCTGAAGGGAGAAAGACACTTGGCTaGGTGGGATGGGGTCCGAGG +
Preference number: 4 (lower is better)
Translates to: LATGRLGRRPSQWPSPEGRKTLG*VGWGPR
Trigger: CCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCT...CCCTTCAGGGGATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR GCA 90 bp CCTCTCACAGCAGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCTCGCAGGGCAACGCTaGCCTTGTACAGATCGAGGC +
Preference number: 4 (lower is better)
Translates to: PLTADWQRAGWEGVLHSGLAGQR*PCTDRG
Trigger: GCCTCGATCTGTACAAGGGCAGCGTTGCCCTGCGAG...GCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCTGCTGTGAGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000421419.3
CDS-3UTR GCA 90 bp CCCCCAGACACAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAGCCACTGCCCCTGCCTaGAGCTGCTGGTTCAGGTCC +
Preference number: 4 (lower is better)
Translates to: PPDTERHLAEWDGVRGSKATAPA*SCWFRS
Trigger: GGACCTGAACCAGCAGCTGCAGGCAGGGGCAGTGGC...TTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTGTGTCTGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR GCA 90 bp TTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGAAGGACAGCTGCACGGCTGTaGCCGTTAGCCGAACATGGC +
Preference number: 4 (lower is better)
Translates to: LAEWDGVRGSKSLRPGRRTAARL*PLAEHG
Trigger: GCCATGTTCGGCTAACGGGCACAGCCGTGCAGCTGT...CCTTCTCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR GCA 90 bp CTCACAGCAGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATCGAAGTGCACTTCCATaGTGGTTGTCCGCCGGCCCC +
Preference number: 4 (lower is better)
Translates to: LTADWQRAGWEGVLHSGHRSALP*WLSAGP
Trigger: GGGGCCGGCGGACAACCAGCATGGAAGTGCACTTCG...ATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCTGCTGTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR GCA 90 bp AGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATCCCCTGAAACTCAGGCTCAGAGGTaGCCCGGGGCCACAGACACT +
Preference number: 4 (lower is better)
Translates to: RLATGRLGRRPSQWPSPETQAQR*PGATDT
Trigger: AGTGTCTGTGGCCCCGGGGCACCTCTGAGCCTGAGT...TTCAGGGGATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR GCA 90 bp TGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGAAGGCAGCAGTGTAGCCGAAATACCGTCTaGTGCTCCATCGCCGGCAGG +
Preference number: 4 (lower is better)
Translates to: WDGVRGSKSLRPGRRQQCSRNTV*CSIAGR
Trigger: CCTGCCGGCGATGGAGCAGCAGACGGTATTTCGGCT...ACACTGCTGCCTTCTCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR GCA 90 bp CTCACAGCAGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATCAGCGTGGCCCGGGGTaGAGAGAGCCGAAATACCGT +
Preference number: 4 (lower is better)
Translates to: LTADWQRAGWEGVLHSGHQRGPG*REPKYR
Trigger: ACGGTATTTCGGCTCTCTGCACCCCGGGCCACGCTG...ATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCTGCTGTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR GCA 90 bp GGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGAAGGCAGCAGTGTGGAGTACTTGCGCCCAGTaGTCTTGGGGTCCAGGGCTT +
Preference number: 4 (lower is better)
Translates to: GWGPRVQKPPSWEKAAVWSTCAQ*SWGPGL
Trigger: AAGCCCTGGACCCCAAGAGCACTGGGCGCAAGTACT...CCACACTGCTGCCTTCTCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR GCA 90 bp CCTCTCACAGCAGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCGGGGCAGGAAGTACTTaGGCCCAGTGCTCTTGGGGT +
Preference number: 4 (lower is better)
Translates to: PLTADWQRAGWEGVLHSGGAGST*AQCSWG
Trigger: ACCCCAAGAGCACTGGGCGCAAGTACTTCCTGCCCC...GCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCTGCTGTGAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR GCA 90 bp AGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATCCCCTGAAGGATCACTTCCAGGCTaGAGCGGGACAGTGCCAGGG +
Preference number: 4 (lower is better)
Translates to: RLATGRLGRRPSQWPSPEGSLPG*SGTVPG
Trigger: CCCTGGCACTGTCCCGCTGCAGCCTGGAAGTGATCC...TTCAGGGGATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR GCA 90 bp TTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATCCCCTGAAGGGGGTGGGAAGCAGATCTaGAGGCTCCCACATGAGCAG +
Preference number: 4 (lower is better)
Translates to: LATGRLGRRPSQWPSPEGGGKQI*RLPHEQ
Trigger: CTGCTCATGTGGGAGCCTGCAGATCTGCTTCCCACC...CCCTTCAGGGGATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR GCA 90 bp TGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGAAGGCAGCAGTGTGGGGGTCCAGGTGGATaGGCACAGCAGTGGACAACA +
Preference number: 4 (lower is better)
Translates to: WDGVRGSKSLRPGRRQQCGGPGG*AQQWTT
Trigger: TGTTGTCCACTGCTGTGCGCATCCACCTGGACCCCC...ACACTGCTGCCTTCTCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR GCA 90 bp CCCCCAGACACAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAACATCTCGGGGCGGGATaGCCAGGCCGGGAGCATCAA +
Preference number: 4 (lower is better)
Translates to: PPDTERHLAEWDGVRGSKHLGAG*PGREHQ
Trigger: TTGATGCTCCCGGCCTGGGCATCCCGCCCCGAGATG...TTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTGTGTCTGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR GCA 90 bp CCCCCTCTCACAGCAGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTCCAGGAGCCCGTGCCTaGAACAGAGCCGCTTTAGCT +
Preference number: 4 (lower is better)
Translates to: PPLTADWQRAGWEGVLHSPGARA*NRAALA
Trigger: AGCTAAAGCGGCTCTGTTGCAGGCACGGGCTCCTGG...ACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCTGCTGTGAGAGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR GCA 90 bp GACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAACACCCAGGAGCCCGTaGCTGCAACAGAGCCGCTTT +
Preference number: 4 (lower is better)
Translates to: DTWLSGMGSEGPKASVLGTPRSP*LQQSRF
Trigger: AAAGCGGCTCTGTTGCAGGCACGGGCTCCTGGGTGT...TCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR GCA 90 bp CCTCTCACAGCAGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCGGGCAGCTGGTTCTTaGGGATGTCCTGCAGCCACT +
Preference number: 4 (lower is better)
Translates to: PLTADWQRAGWEGVLHSGRAAGS*GCPAAT
Trigger: AGTGGCTGCAGGACATCCGCAAGAACCAGCTGCCCG...GCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCTGCTGTGAGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR GCA 90 bp TTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGAAGGCGGGCAGCTGGTTCTTaGGGATGTCCTGCAGCCACT +
Preference number: 4 (lower is better)
Translates to: LAEWDGVRGSKSLRPGRRRAAGS*GCPAAT
Trigger: AGTGGCTGCAGGACATCCGCAAGAACCAGCTGCCCG...CCTTCTCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR GCA 90 bp CAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCAGCTGGACAACCGAGTaGATGGGGCCCACGCCTCCC +
Preference number: 4 (lower is better)
Translates to: QKDTWLSGMGSEGPKASVSWTTE*MGPTPP
Trigger: GGGAGGCGTGGGCCCCATGCACTCGGTTGTCCAGCT...GACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR GCA 90 bp CCCCCAGACACAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAGCAGAGCGCTTATCCTaGAGGGAGCGGGAGACGGGG +
Preference number: 4 (lower is better)
Translates to: PPDTERHLAEWDGVRGSKAERLS*RERETG
Trigger: CCCCGTCTCCCGCTCCCTGCAGGATAAGCGCTCTGC...TTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTGTGTCTGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR GCA 90 bp GACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGACTCATGGCCCCGCGATaGCACGTCACAGATGGTCTG +
Preference number: 4 (lower is better)
Translates to: DTWLSGMGSEGPKASVLGLMAPR*HVTDGL
Trigger: CAGACCATCTGTGACGTGGCATCGCGGGGCCATGAG...TCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR GCA 90 bp CCTCTCACAGCAGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCTCATGGCCCCGCGATaGCACGTCACAGATGGTCTG +
Preference number: 4 (lower is better)
Translates to: PLTADWQRAGWEGVLHSGLMAPR*HVTDGL
Trigger: CAGACCATCTGTGACGTGGCATCGCGGGGCCATGAG...GCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCTGCTGTGAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR GCA 90 bp TGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGAAGGCAGCAGTGTTCCCCGGAGGAAAAGTaGAGAGCCAGGGCTAAGGCC +
Preference number: 4 (lower is better)
Translates to: WDGVRGSKSLRPGRRQQCSPEEK*RARAKA
Trigger: GGCCTTAGCCCTGGCTCTGCACTTTTCCTCCGGGGA...ACACTGCTGCCTTCTCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR CCA 90 bp AGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATCCCCTGAAGCACGGCCACCTCGATaGAGCCCACGAAGCCTTCCA +
Preference number: 4 (lower is better)
Translates to: RLATGRLGRRPSQWPSPEARPPR*SPRSLP
Trigger: TGGAAGGCTTCGTGGGCTCCATCGAGGTGGCCGTGC...TTCAGGGGATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000421419.3
CDS-3UTR CCA 90 bp CAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCGGCTGCAAGGTGAGCTaGAGGCCGGACACGCGCACT +
Preference number: 4 (lower is better)
Translates to: QKDTWLSGMGSEGPKASVGCKVS*RPDTRT
Trigger: AGTGCGCGTGTCCGGCCTCCAGCTCACCTTGCAGCC...GACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000421419.3
CDS-3UTR CCA 90 bp CTCACAGCAGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATCCGCCACCTCCAACTTaGGGCCAGGGAAGGCCTCAT +
Preference number: 4 (lower is better)
Translates to: LTADWQRAGWEGVLHSGHPPPPT*GQGRPH
Trigger: ATGAGGCCTTCCCTGGCCCCAAGTTGGAGGTGGCGG...ATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCTGCTGTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp CCCCCAGACACAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAGCGAGTCAGGGCGCATaGTGTCCAGGAGGGGGTTGG +
Preference number: 4 (lower is better)
Translates to: PPDTERHLAEWDGVRGSKASQGA*CPGGGW
Trigger: CCAACCCCCTCCTGGACACCATGCGCCCTGACTCGC...TTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTGTGTCTGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp CAGACACAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCGGCCGAGCTGAGGCCTaGGAGCCCAGCGTACCAGGA +
Preference number: 4 (lower is better)
Translates to: QTQKDTWLSGMGSEGPKAGRAEA*EPSVPG
Trigger: TCCTGGTACGCTGGGCTCCCAGGCCTCAGCTCGGCC...GGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTGTGTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp CCCCCAGACACAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAACGCAGGATCTGTGTGTaGCGCAGATGGGCGCAGGGC +
Preference number: 4 (lower is better)
Translates to: PPDTERHLAEWDGVRGSKRRICV*RRWAQG
Trigger: GCCCTGCGCCCATCTGCGCCACACACAGATCCTGCG...TTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTGTGTCTGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp CCCCCTCTCACAGCAGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTAGCTCTGACCGGAACTaGGGCTCACTCAGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: PPLTADWQRAGWEGVLHSSSDRN*GSLSSS
Trigger: GCTGGAGCTGAGTGAGCCCCAGTTCCGGTCAGAGCT...ACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCTGCTGTGAGAGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp GACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGATGGGGTCCAGGGCTTTaGAGACACGCAGGCAAGGGA +
Preference number: 4 (lower is better)
Translates to: DTWLSGMGSEGPKASVLGWGPGL*RHAGKG
Trigger: TCCCTTGCCTGCGTGTCTCCAAAGCCCTGGACCCCA...TCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp CTCACAGCAGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATCCTCCGATGGGTAGATaGTTGGGGCCAGCTGAGCCG +
Preference number: 4 (lower is better)
Translates to: LTADWQRAGWEGVLHSGHPPMGR*LGPAEP
Trigger: CGGCTCAGCTGGCCCCAACCATCTACCCATCGGAGG...ATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCTGCTGTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp CCAGACACAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCGAGGGCCGTCTCCACTaGGGGGCACGAGGGCAGAGA +
Preference number: 4 (lower is better)
Translates to: PDTERHLAEWDGVRGSKSEGRLH*GARGQR
Trigger: TCTCTGCCCTCGTGCCCCCCAGTGGAGACGGCCCTC...GCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTGTGTCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp TGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGAAGGCATAGGTAGACGGAGATaGGCGACGCCTGAGGGAGGT +
Preference number: 4 (lower is better)
Translates to: WLSGMGSEGPKASVLGEGIGRRR*ATPEGG
Trigger: ACCTCCCTCAGGCGTCGCCCATCTCCGTCTACCTAT...GCCTTCTCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp AGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATCCCCTGAACGTCCCTCACAACGATaGGGCCGGGATGCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: RLATGRLGRRPSQWPSPERPSQR*GRDAAV
Trigger: CACAGCTGCATCCCGGCCCCATCGTTGTGAGGGACG...TTCAGGGGATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp TTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGAAGGTGTGGCTGGCTCCGCTaGGTACACCTCGTGCTGGAA +
Preference number: 4 (lower is better)
Translates to: LAEWDGVRGSKSLRPGRRCGWLR*VHLVLE
Trigger: TTCCAGCACGAGGTGTACCCAGCGGAGCCAGCCACA...CCTTCTCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp TGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATCCCCTGAAGGGCAGGAACTTGTTGATCTaGGAGGAGGCGAGCCGGTCT +
Preference number: 4 (lower is better)
Translates to: WQRAGWEGVLHSGHPLKGRNLLI*EEASRS
Trigger: AGACCGGCTCGCCTCCTCCCAGATCAACAAGTTCCT...GCCCTTCAGGGGATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp CCTCTCACAGCAGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCGTGAGCATGTTAGAGTaGGCACGTCGCGGCATCCGC +
Preference number: 4 (lower is better)
Translates to: PLTADWQRAGWEGVLHSGVSMLE*ARRGIR
Trigger: GCGGATGCCGCGACGTGCCCACTCTAACATGCTCAC...GCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCTGCTGTGAGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp CAGACACAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCCTTCCAGGGGGCTGCTaGGCTGGGCTCGAGTCTCGG +
Preference number: 4 (lower is better)
Translates to: QTQKDTWLSGMGSEGPKALPGGC*AGLESR
Trigger: CCGAGACTCGAGCCCAGCCCAGCAGCCCCCTGGAAG...GGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTGTGTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp GACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGACCTCCTGCGAACCAGTaGTCTCTACGCCTTCGGCCT +
Preference number: 4 (lower is better)
Translates to: DTWLSGMGSEGPKASVLGPPANQ*SLRLRP
Trigger: AGGCCGAAGGCGTAGAGACCACTGGTTCGCAGGAGG...TCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp AGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATCCCCTGAAGCTGTGTCCACCTCCTaGGGCCTCCTGCGAACCAGT +
Preference number: 4 (lower is better)
Translates to: RLATGRLGRRPSQWPSPEAVSTS*GLLRTS
Trigger: ACTGGTTCGCAGGAGGCCCCAGGAGGTGGACACAGC...TTCAGGGGATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp TTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATCCCCTGAAGGGTCCTGTACTGCTCAATaGGCAGCCACAGCAGGTCCC +
Preference number: 4 (lower is better)
Translates to: LATGRLGRRPSQWPSPEGSCTAQ*AATAGP
Trigger: GGGACCTGCTGTGGCTGCCCATTGAGCAGTACAGGA...CCCTTCAGGGGATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR CCA 90 bp TGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGAAGGCTCCTGTACTGCTCAATaGGCAGCCACAGCAGGTCCC +
Preference number: 4 (lower is better)
Translates to: WLSGMGSEGPKASVLGEGSCTAQ*AATAGP
Trigger: GGGACCTGCTGTGGCTGCCCATTGAGCAGTACAGGA...GCCTTCTCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR CCA 90 bp AGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATCCCCTGAAAGGGCGTGGTCCTTGTaGGCGTCGGGGACAATCTGG +
Preference number: 4 (lower is better)
Translates to: RLATGRLGRRPSQWPSPERAWSL*ASGTIW
Trigger: CCAGATTGTCCCCGACGCCCACAAGGACCACGCCCT...TTCAGGGGATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR CCA 90 bp GACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGTGGGCTGCAGCTCTTaGGAGGCTCAGGAGCATGGT +
Preference number: 4 (lower is better)
Translates to: DTWLSGMGSEGPKASVLGVGCSS*EAQEHG
Trigger: ACCATGCTCCTGAGCCTCCCAAGAGCTGCAGCCCAC...TCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR CCA 90 bp CCCCCTCTCACAGCAGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGTGGGCTGCAGCTCTTaGGAGGCTCAGGAGCATGGT +
Preference number: 4 (lower is better)
Translates to: PPLTADWQRAGWEGVLHSVGCSS*EAQEHG
Trigger: ACCATGCTCCTGAGCCTCCCAAGAGCTGCAGCCCAC...ACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCTGCTGTGAGAGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR CCA 90 bp TTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGAAGGAGACACTTGGCTGAGTaGGATGGGGTCCGAGGGTCC +
Preference number: 4 (lower is better)
Translates to: LAEWDGVRGSKSLRPGRRRHLAE*DGVRGS
Trigger: GGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCT...CCTTCTCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR TCA 90 bp CCCCCTCTCACAGCAGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTAGGCCACACTGCTTGTaGGGCCAGCCATGGAGAAGA +
Preference number: 4 (lower is better)
Translates to: PPLTADWQRAGWEGVLHSRPHCL*GQPWRR
Trigger: TCTTCTCCATGGCTGGCCTCACAAGCAGTGTGGCCT...ACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCTGCTGTGAGAGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR TCA 90 bp GACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGATGGGGCAGACGTCTaGAGCAAGGTCAGGGTCACA +
Preference number: 4 (lower is better)
Translates to: DTWLSGMGSEGPKASVLGDGADV*SKVRVT
Trigger: TGTGACCCTGACCTTGCTTCAGACGTCTGCCCCATC...TCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR TCA 90 bp TGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGAAGGCAGTCCGAGTCTGGGGTaGGATCAAAGCAGTTGGCCA +
Preference number: 4 (lower is better)
Translates to: WLSGMGSEGPKASVLGEGSPSLG*DQSSWP
Trigger: TGGCCAACTGCTTTGATCTCACCCCAGACTCGGACT...GCCTTCTCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR TCA 90 bp CCCCCTCTCACAGCAGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTAAGGTGCTCTGCAAGTaGAGACTTGGGGCCTCAGGG +
Preference number: 4 (lower is better)
Translates to: PPLTADWQRAGWEGVLHSKVLCK*RLGASG
Trigger: CCCTGAGGCCCCAAGTCTTCACTTGCAGAGCACCTT...ACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCTGCTGTGAGAGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR TCA 90 bp CAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCGCTGCCGATCGGCCGTaGGAAGTAACCGTCCCTCAC +
Preference number: 4 (lower is better)
Translates to: QKDTWLSGMGSEGPKASVAADRP*EVTVPH
Trigger: GTGAGGGACGGTTACTTCTCACGGCCGATCGGCAGC...GACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR TCA 90 bp GACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGGTACAGGAACTTGTTaGTCTGGGAGGAGGCGAGCC +
Preference number: 4 (lower is better)
Translates to: DTWLSGMGSEGPKASVLGGTGTC*SGRRRA
Trigger: GGCTCGCCTCCTCCCAGATCAACAAGTTCCTGTACC...TCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR TCA 90 bp TGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGAAGGCAGCAGTGTAGAAAGACACTTGGCTaGGTGGGATGGGGTCCGAGG +
Preference number: 4 (lower is better)
Translates to: WDGVRGSKSLRPGRRQQCRKTLG*VGWGPR
Trigger: CCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCT...ACACTGCTGCCTTCTCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR TCA 90 bp CCCCCTCTCACAGCAGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTAGAAAGACACTTGGCTaGGTGGGATGGGGTCCGAGG +
Preference number: 4 (lower is better)
Translates to: PPLTADWQRAGWEGVLHSRKTLG*VGWGPR
Trigger: CCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCT...ACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCTGCTGTGAGAGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR GCA 90 bp TTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGAAGGCACTCCTGGGCCAGCTaGAGGCTTGTGGTCATGCAT +
Preference number: 4 (lower is better)
Translates to: LAEWDGVRGSKSLRPGRRHSWAS*RLVVMH
Trigger: ATGCATGACCACAAGCCTGCAGCTGGCCCAGGAGTG...CCTTCTCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377264.8
CDS-3UTR GCA 90 bp CAGACACAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCGTGCAGGCGGACCCCTaGCAGCTGCAGCAGCTTGTG +
Preference number: 4 (lower is better)
Translates to: QTQKDTWLSGMGSEGPKAVQADP*QLQQLV
Trigger: CACAAGCTGCTGCAGCTGGCAGGGGTCCGCCTGCAC...GGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTGTGTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR GCA 90 bp CCCCCAGACACAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAACGAAATACCGTCTGCTaGTCCATCGCCGGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: PPDTERHLAEWDGVRGSKRNTVC*SIAGRG
Trigger: GCCCCTGCCGGCGATGGAGCAGCAGACGGTATTTCG...TTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTGTGTCTGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR GCA 90 bp CTCACAGCAGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATGGGGCAGGAAGTACTTaGGCCCAGTGCTCTTGGGGT +
Preference number: 4 (lower is better)
Translates to: LTADWQRAGWEGVLHSGHGAGST*AQCSWG
Trigger: ACCCCAAGAGCACTGGGCGCAAGTACTTCCTGCCCC...ATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCTGCTGTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR GCA 90 bp AGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATCCCCTGAACCTCCCACTGTGTGCTaGTGGACTGGGGGTTCACAG +
Preference number: 4 (lower is better)
Translates to: RLATGRLGRRPSQWPSPEPPTVC*WTGGSQ
Trigger: CTGTGAACCCCCAGTCCAGCAGCACACAGTGGGAGG...TTCAGGGGATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR GCA 90 bp TTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATCCCCTGAAGGGATCTTAAAGCTGTCGTaGCAGAAGCCTGAGGGGCCG +
Preference number: 4 (lower is better)
Translates to: LATGRLGRRPSQWPSPEGILKLS*QKPEGP
Trigger: CGGCCCCTCAGGCTTCTGGCACGACAGCTTTAAGAT...CCCTTCAGGGGATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR GCA 90 bp GACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGACTGAAGAGGGTACCGTaGTCCATGTCCAGCACCAGC +
Preference number: 4 (lower is better)
Translates to: DTWLSGMGSEGPKASVLGLKRVP*SMSSTS
Trigger: GCTGGTGCTGGACATGGAGCACGGTACCCTCTTCAG...TCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR GCA 90 bp CCTCTCACAGCAGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCTGAAGAGGGTACCGTaGTCCATGTCCAGCACCAGC +
Preference number: 4 (lower is better)
Translates to: PLTADWQRAGWEGVLHSGLKRVP*SMSSTS
Trigger: GCTGGTGCTGGACATGGAGCACGGTACCCTCTTCAG...GCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCTGCTGTGAGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR GCA 90 bp TTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGAAGGTCCAACAACTGGGAATaGCAGCTCTGCTCGGGCAGG +
Preference number: 4 (lower is better)
Translates to: LAEWDGVRGSKSLRPGRRSNNWE*QLCSGR
Trigger: CCTGCCCGAGCAGAGCTGGCATTCCCAGTTGTTGGA...CCTTCTCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR GCA 90 bp CCCCCAGACACAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAACGATGGGGCCGGGATaGAGCTGTGTCACCACAGGC +
Preference number: 4 (lower is better)
Translates to: PPDTERHLAEWDGVRGSKTMGPG*SCVTTG
Trigger: GCCTGTGGTGACACAGCTGCATCCCGGCCCCATCGT...TTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTGTGTCTGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR GCA 90 bp CTCACAGCAGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATGCAGCAAGTCCGTGCTaGCGATCGGCCGTGAGAAGT +
Preference number: 4 (lower is better)
Translates to: LTADWQRAGWEGVLHSGHAASPC*RSAVRS
Trigger: ACTTCTCACGGCCGATCGGCAGCACGGACTTGCTGC...ATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCTGCTGTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR GCA 90 bp CTCACAGCAGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATTGGGAAATGGGCAGGTaGCCGCAGCAAGTCCGTGCT +
Preference number: 4 (lower is better)
Translates to: LTADWQRAGWEGVLHSGHWEMGR*PQQVRA
Trigger: AGCACGGACTTGCTGCGGGCACCTGCCCATTTCCCA...ATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCTGCTGTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR GCA 90 bp GACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGTAGTGGGGGCCACATaGAGCGCTTTGATGGTGAGC +
Preference number: 4 (lower is better)
Translates to: DTWLSGMGSEGPKASVLGVVGAT*SALMVS
Trigger: GCTCACCATCAAAGCGCTGCATGTGGCCCCCACTAC...TCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR GCA 90 bp CAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCAATCTGGTTGCGCATaGCCCCGAGCAGGCTGGACG +
Preference number: 4 (lower is better)
Translates to: QKDTWLSGMGSEGPKASVQSGCA*PRAGWT
Trigger: CGTCCAGCCTGCTCGGGGGCATGCGCAACCAGATTG...GACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR GCA 90 bp CCAGACACAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCGGGGACAATCTGGTTaGGCATGCCCCCGAGCAGGC +
Preference number: 4 (lower is better)
Translates to: PDTERHLAEWDGVRGSKSRGQSG*ACPRAG
Trigger: GCCTGCTCGGGGGCATGCGCAACCAGATTGTCCCCG...GCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTGTGTCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR CCA 90 bp TTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATCCCCTGAAGGGGACCAGATTTCCAGGTaGATGTCTCGCAGGGCAACG +
Preference number: 4 (lower is better)
Translates to: LATGRLGRRPSQWPSPEGDQISR*MSRRAT
Trigger: CGTTGCCCTGCGAGACATCCACCTGGAAATCTGGTC...CCCTTCAGGGGATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000421419.3
CDS-3UTR CCA 90 bp TGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATCCCCTGAAGGGCACAGTCTCAATGGTCTaGGCAAACATCTCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: WQRAGWEGVLHSGHPLKGTVSMV*ANISSP
Trigger: GGGGCTGGAGATGTTTGCCCAGACCATTGAGACTGT...GCCCTTCAGGGGATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377264.8
CDS-3UTR CCA 90 bp CTCACAGCAGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATCCCGTTAGCCGAACATaGCTACAGGGACAGGCCCTC +
Preference number: 4 (lower is better)
Translates to: LTADWQRAGWEGVLHSGHPVSRT*LQGQAL
Trigger: GAGGGCCTGTCCCTGTAGCCATGTTCGGCTAACGGG...ATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCTGCTGTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp CCAGACACAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCTGTGTGTGGCGCAGATaGGCGCAGGGCCGAGCTGAG +
Preference number: 4 (lower is better)
Translates to: PDTERHLAEWDGVRGSKSCVWRR*AQGRAE
Trigger: CTCAGCTCGGCCCTGCGCCCATCTGCGCCACACACA...GCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTGTGTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp TGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGAAGGCAGGGCCAGTTCTGAGTaGCAATGGCAGGCAACTGAG +
Preference number: 4 (lower is better)
Translates to: WLSGMGSEGPKASVLGEGRASSE*QWQATE
Trigger: CTCAGTTGCCTGCCATTGCCACTCAGAACTGGCCCT...GCCTTCTCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp CCCCCAGACACAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAATGTCAGCAGGCCGGCTaGAGGCTCAGCAGGTACGGT +
Preference number: 4 (lower is better)
Translates to: PPDTERHLAEWDGVRGSKCQQAG*RLSRYG
Trigger: ACCGTACCTGCTGAGCCTCCAGCCGGCCTGCTGACA...TTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTGTGTCTGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp CTCACAGCAGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATTGGGGTCCAGGGCTTTaGAGACACGCAGGCAAGGGA +
Preference number: 4 (lower is better)
Translates to: LTADWQRAGWEGVLHSGHWGPGL*RHAGKG
Trigger: TCCCTTGCCTGCGTGTCTCCAAAGCCCTGGACCCCA...ATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCTGCTGTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp AGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATCCCCTGAATGCGCCCAGTGCTCTTaGGGTCCAGGGCTTTGGAGA +
Preference number: 4 (lower is better)
Translates to: RLATGRLGRRPSQWPSPECAQCS*GPGLWR
Trigger: TCTCCAAAGCCCTGGACCCCAAGAGCACTGGGCGCA...TTCAGGGGATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp TGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGAAGGCTGTGTGCTGCTGGACTaGGGGTTCACAGTCACCACT +
Preference number: 4 (lower is better)
Translates to: WLSGMGSEGPKASVLGEGCVLLD*GFTVTT
Trigger: AGTGGTGACTGTGAACCCCCAGTCCAGCAGCACACA...GCCTTCTCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp CTCACAGCAGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATGCCAGGGTCCGGCTCTaGAACGTCCTCATCTCCTCA +
Preference number: 4 (lower is better)
Translates to: LTADWQRAGWEGVLHSGHARVRL*NVLISS
Trigger: TGAGGAGATGAGGACGTTCCAGAGCCGGACCCTGGC...ATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCTGCTGTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp CCCCCAGACACAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAACCTCCGATGGGTAGATaGTTGGGGCCAGCTGAGCCG +
Preference number: 4 (lower is better)
Translates to: PPDTERHLAEWDGVRGSKPPMGR*LGPAEP
Trigger: CGGCTCAGCTGGCCCCAACCATCTACCCATCGGAGG...TTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTGTGTCTGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp CTCACAGCAGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATCACCCCTTCCTCCGATaGGTAGATGGTTGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: LTADWQRAGWEGVLHSGHHPFLR*VDGWGQ
Trigger: CTGGCCCCAACCATCTACCCATCGGAGGAAGGGGTG...ATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCTGCTGTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp CAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGCACTGGGAAATaGGCAGGTGCCCGCAGCAAG +
Preference number: 4 (lower is better)
Translates to: QKDTWLSGMGSEGPKASVLGTGK*AGARSK
Trigger: CTTGCTGCGGGCACCTGCCCATTTCCCAGTGCCCAG...GACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp ACAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCAGTTCTTGCCCTGTaGCCGGGGTGGGGGCCAAAG +
Preference number: 4 (lower is better)
Translates to: TERHLAEWDGVRGSKSLRPVLAL*PGWGPK
Trigger: CTTTGGCCCCCACCCCGGCCACAGGGCAAGAACTGG...ACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp ACAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTGTGCGCCATGAGTTCTaGGGCCGGTTGGGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: TERHLAEWDGVRGSKSLRVRHEF*GRLGPE
Trigger: CTCTGGCCCCAACCGGCCCCAGAACTCATGGCGCAC...ACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp GGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGAAGGCAGCAGTGTGGGGGTACACCTCGTGCTaGAAGCTTACCTTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: GWGPRVQKPPSWEKAAVWGYTSC*KLTLLS
Trigger: GCTGAGCAAGGTAAGCTTCCAGCACGAGGTGTACCC...CCACACTGCTGCCTTCTCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp GGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGAAGGCAGCAGTGTGGGCAAAAGTGCCCACCTaGTCCATCGTGACGTGCTTG +
Preference number: 4 (lower is better)
Translates to: GWGPRVQKPPSWEKAAVWAKVPT*SIVTCL
Trigger: CAAGCACGTCACGATGGACCAGGTGGGCACTTTTGC...CCACACTGCTGCCTTCTCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp CAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCAGCAGGCCGGGCAGCTaGTTCTTGCGGATGTCCTGC +
Preference number: 4 (lower is better)
Translates to: QKDTWLSGMGSEGPKASVSRPGS*FLRMSC
Trigger: GCAGGACATCCGCAAGAACCAGCTGCCCGGCCTGCT...GACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR CCA 90 bp CAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCAGCCCCTTCTGCTCATaGCCCCGCGATGCCACGTCA +
Preference number: 4 (lower is better)
Translates to: QKDTWLSGMGSEGPKASVSPFCS*PRDATS
Trigger: TGACGTGGCATCGCGGGGCCATGAGCAGAAGGGGCT...GACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR CCA 90 bp CAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCAGGGCGTGGTCCTTGTaGGCGTCGGGGACAATCTGG +
Preference number: 4 (lower is better)
Translates to: QKDTWLSGMGSEGPKASVRAWSL*ASGTIW
Trigger: CCAGATTGTCCCCGACGCCCACAAGGACCACGCCCT...GACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR CCA 90 bp TGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGAAGGCAGCAGTGTCCTCTCACAGCAGATTaGCAACGGGCAGGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: WDGVRGSKSLRPGRRQQCPLTAD*QRAGWE
Trigger: TTCCCAGCCTGCCCGTTGCCAATCTGCTGTGAGAGG...ACACTGCTGCCTTCTCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR TCA 90 bp CCCCCAGACACAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAGTCCAGGGCCAGTTCTaGGTGGCAATGGCAGGCAAC +
Preference number: 4 (lower is better)
Translates to: PPDTERHLAEWDGVRGSKVQGQF*VAMAGN
Trigger: GTTGCCTGCCATTGCCACTCAGAACTGGCCCTGGAC...TTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTGTGTCTGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR TCA 90 bp TGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGAAGGCAGCAGTGTAGTCCGAGTCTGGGGTaGGATCAAAGCAGTTGGCCA +
Preference number: 4 (lower is better)
Translates to: WDGVRGSKSLRPGRRQQCSPSLG*DQSSWP
Trigger: TGGCCAACTGCTTTGATCTCACCCCAGACTCGGACT...ACACTGCTGCCTTCTCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR TCA 90 bp CTCACAGCAGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATAGTACTGGGAGACGCTaGAGAGGGTACCGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: LTADWQRAGWEGVLHSGHSTGRR*RGYRAP
Trigger: TGGAGCACGGTACCCTCTTCAGCGTCTCCCAGTACT...ATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCTGCTGTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR TCA 90 bp CAGACACAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCGTACCAACCGGTTGCTaGGTTCCAGGGCGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: QTQKDTWLSGMGSEGPKAVPTGC*VPGRQR
Trigger: CCTCTGCCGCCCTGGAACTCAGCAACCGGTTGGTAC...GGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTGTGTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR GCA 90 bp CAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTCGCAGGGCAACGCTaGCCTTGTACAGATCGAGGC +
Preference number: 4 (lower is better)
Translates to: QKDTWLSGMGSEGPKASVLAGQR*PCTDRG
Trigger: GCCTCGATCTGTACAAGGGCAGCGTTGCCCTGCGAG...GACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000421419.3
CDS-3UTR GCA 90 bp AGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATCCCCTGAAGCTTGGGTCCCGCACTaGCTCATCACAGTACTCCAG +
Preference number: 4 (lower is better)
Translates to: RLATGRLGRRPSQWPSPEAWVPH*LITVLQ
Trigger: CTGGAGTACTGTGATGAGGCAGTGCGGGACCCAAGC...TTCAGGGGATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377264.8
CDS-3UTR GCA 90 bp AGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATCCCCTGAATCCAGCACCTCCAGCTaGCCGAAGTGCACTTCCATG +
Preference number: 4 (lower is better)
Translates to: RLATGRLGRRPSQWPSPESSTSS*PKCTSM
Trigger: CATGGAAGTGCACTTCGGGCAGCTGGAGGTGCTGGA...TTCAGGGGATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR GCA 90 bp CAGACACAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCCAGCGTGGCCCGGGGTaGAGAGAGCCGAAATACCGT +
Preference number: 4 (lower is better)
Translates to: QTQKDTWLSGMGSEGPKAQRGPG*REPKYR
Trigger: ACGGTATTTCGGCTCTCTGCACCCCGGGCCACGCTG...GGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTGTGTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR GCA 90 bp CTCACAGCAGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATAGTACTTGCGCCCAGTaGTCTTGGGGTCCAGGGCTT +
Preference number: 4 (lower is better)
Translates to: LTADWQRAGWEGVLHSGHSTCAQ*SWGPGL
Trigger: AAGCCCTGGACCCCAAGAGCACTGGGCGCAAGTACT...ATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCTGCTGTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR GCA 90 bp CAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCCTCCCACTGTGTGCTaGTGGACTGGGGGTTCACAG +
Preference number: 4 (lower is better)
Translates to: QKDTWLSGMGSEGPKASVPPTVC*WTGGSQ
Trigger: CTGTGAACCCCCAGTCCAGCAGCACACAGTGGGAGG...GACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR GCA 90 bp AGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATCCCCTGAATCCAACAACTGGGAATaGCAGCTCTGCTCGGGCAGG +
Preference number: 4 (lower is better)
Translates to: RLATGRLGRRPSQWPSPESNNWE*QLCSGR
Trigger: CCTGCCCGAGCAGAGCTGGCATTCCCAGTTGTTGGA...TTCAGGGGATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR GCA 90 bp TGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGAAGGCGAGTCGGCACAGCTGTaGACGTGTACCACATTGTTG +
Preference number: 4 (lower is better)
Translates to: WLSGMGSEGPKASVLGEGESAQL*TCTTLL
Trigger: CAACAATGTGGTACACGTGCACAGCTGTGCCGACTC...GCCTTCTCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR GCA 90 bp TGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGAAGGCGGTGCAGATCGCCTGTaGTCATTACGTACTGGAGCA +
Preference number: 4 (lower is better)
Translates to: WLSGMGSEGPKASVLGEGGADRL*SLRTGA
Trigger: TGCTCCAGTACGTAATGAGCACAGGCGATCTGCACC...GCCTTCTCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR GCA 90 bp CAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCGTAGCACCACCCGAGTaGTGGGCACTGGGAAATGGG +
Preference number: 4 (lower is better)
Translates to: QKDTWLSGMGSEGPKASVVAPPE*WALGNG
Trigger: CCCATTTCCCAGTGCCCAGCACTCGGGTGGTGCTAC...GACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR GCA 90 bp CCTCTCACAGCAGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCGCTGGGTACACCTCGTaGTGGAAGCTTACCTTGCTC +
Preference number: 4 (lower is better)
Translates to: PLTADWQRAGWEGVLHSGAGYTS*WKLTLL
Trigger: GAGCAAGGTAAGCTTCCAGCACGAGGTGTACCCAGC...GCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCTGCTGTGAGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR GCA 90 bp TGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGAAGGCAGCAGTGTGCTGGGTACACCTCGTaGTGGAAGCTTACCTTGCTC +
Preference number: 4 (lower is better)
Translates to: WDGVRGSKSLRPGRRQQCAGYTS*WKLTLL
Trigger: GAGCAAGGTAAGCTTCCAGCACGAGGTGTACCCAGC...ACACTGCTGCCTTCTCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR GCA 90 bp CAGACACAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCCCTCCTGGGGCCTCCTaGGAACCAGTGGTCTCTACG +
Preference number: 4 (lower is better)
Translates to: QTQKDTWLSGMGSEGPKAPPGAS*EPVVST
Trigger: CGTAGAGACCACTGGTTCGCAGGAGGCCCCAGGAGG...GGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTGTGTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR GCA 90 bp CAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCCAGGAGCCCGTGCCTaGAACAGAGCCGCTTTAGCT +
Preference number: 4 (lower is better)
Translates to: QKDTWLSGMGSEGPKASVPGARA*NRAALA
Trigger: AGCTAAAGCGGCTCTGTTGCAGGCACGGGCTCCTGG...GACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR GCA 90 bp TTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGAAGGTTCTTGCGGATGTCCTaGAGCCACTCGTTGAGGGCA +
Preference number: 4 (lower is better)
Translates to: LAEWDGVRGSKSLRPGRRFLRMS*SHSLRA
Trigger: TGCCCTCAACGAGTGGCTGCAGGACATCCGCAAGAA...CCTTCTCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR GCA 90 bp TTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGAAGGCCATCCTTCCTGTACTaGTCAATGGGCAGCCACAGC +
Preference number: 4 (lower is better)
Translates to: LAEWDGVRGSKSLRPGRRPSFLY*SMGSHS
Trigger: GCTGTGGCTGCCCATTGAGCAGTACAGGAAGGATGG...CCTTCTCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR CCA 90 bp CAGACACAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCGTTGGTAAGGGGGTCTaGGCTGAGGGGCTCAGCCAC +
Preference number: 4 (lower is better)
Translates to: QTQKDTWLSGMGSEGPKAVGKGV*AEGLSH
Trigger: GTGGCTGAGCCCCTCAGCCCAGACCCCCTTACCAAC...GGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTGTGTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp CCAGACACAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCGTGGCGAGGTCAGGTaGTCCGGAAGATGGGGCAGA +
Preference number: 4 (lower is better)
Translates to: PDTERHLAEWDGVRGSKSRGEVR*SGRWGR
Trigger: TCTGCCCCATCTTCCGGACCACCTGACCTCGCCACG...GCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTGTGTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp CTCACAGCAGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATGGCCCTCTGGAAGCGTaGTCGAAGGTGATGGAAGTC +
Preference number: 4 (lower is better)
Translates to: LTADWQRAGWEGVLHSGHGPLEA*SKVMEV
Trigger: GACTTCCATCACCTTCGACCACGCTTCCAGAGGGCC...ATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCTGCTGTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp CTCACAGCAGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATAGTTCTGAGTGGCAATaGCAGGCAACTGAGCGCCGG +
Preference number: 4 (lower is better)
Translates to: LTADWQRAGWEGVLHSGHSSEWQ*QATERR
Trigger: CCGGCGCTCAGTTGCCTGCCATTGCCACTCAGAACT...ATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCTGCTGTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp CCCCCTCTCACAGCAGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTAGGGCCAGTTCTGAGTaGCAATGGCAGGCAACTGAG +
Preference number: 4 (lower is better)
Translates to: PPLTADWQRAGWEGVLHSRASSE*QWQATE
Trigger: CTCAGTTGCCTGCCATTGCCACTCAGAACTGGCCCT...ACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCTGCTGTGAGAGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp CAGACACAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCCAGGTGAGTTCCAGGTaGGTGGGGACTGGGGGACCA +
Preference number: 4 (lower is better)
Translates to: QTQKDTWLSGMGSEGPKAQVSSR*VGTGGP
Trigger: TGGTCCCCCAGTCCCCACCCACCTGGAACTCACCTG...GGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTGTGTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp CCCCCTCTCACAGCAGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTACAGTCACCACTACCTaGGGCAGGAAGTACTTGCGC +
Preference number: 4 (lower is better)
Translates to: PPLTADWQRAGWEGVLHSTVTTT*GRKYLR
Trigger: GCGCAAGTACTTCCTGCCCCAGGTAGTGGTGACTGT...ACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCTGCTGTGAGAGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp GACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGATGTGTGCTGCTGGACTaGGGGTTCACAGTCACCACT +
Preference number: 4 (lower is better)
Translates to: DTWLSGMGSEGPKASVLGCVLLD*GFTVTT
Trigger: AGTGGTGACTGTGAACCCCCAGTCCAGCAGCACACA...TCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp CCCCCAGACACAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAGCCAGGGTCCGGCTCTaGAACGTCCTCATCTCCTCA +
Preference number: 4 (lower is better)
Translates to: PPDTERHLAEWDGVRGSKARVRL*NVLISS
Trigger: TGAGGAGATGAGGACGTTCCAGAGCCGGACCCTGGC...TTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTGTGTCTGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp CCCCCTCTCACAGCAGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTCCCACTGAGAAGAAGTaGGCATCCTCGTCATCCGAG +
Preference number: 4 (lower is better)
Translates to: PPLTADWQRAGWEGVLHSPTEKK*ASSSSE
Trigger: CTCGGATGACGAGGATGCCCACTTCTTCTCAGTGGG...ACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCTGCTGTGAGAGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp CCAGACACAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTGCAAGTGAAGACTTaGGGCCTCAGGGGCAGCGGC +
Preference number: 4 (lower is better)
Translates to: PDTERHLAEWDGVRGSKSLQVKT*GLRGSG
Trigger: GCCGCTGCCCCTGAGGCCCCAAGTCTTCACTTGCAG...GCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTGTGTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp CCCCCTCTCACAGCAGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGAAGTAGCCAAGTCCTaGCTGGCCACAGTACTGGGA +
Preference number: 4 (lower is better)
Translates to: PPLTADWQRAGWEGVLHSEVAKS*LATVLG
Trigger: TCCCAGTACTGTGGCCAGCCAGGACTTGGCTACTTC...ACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCTGCTGTGAGAGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp TTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGAAGGTGTAGTGGCGCAAGGTaGCTTTGTGCAACCGCAGTG +
Preference number: 4 (lower is better)
Translates to: LAEWDGVRGSKSLRPGRRCSGAR*LCATAV
Trigger: CACTGCGGTTGCACAAAGCCACCTTGCGCCACTACA...CCTTCTCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp TGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGAAGGCAGGAACTCCAACAACTaGGAATGCCAGCTCTGCTCG +
Preference number: 4 (lower is better)
Translates to: WLSGMGSEGPKASVLGEGRNSNN*ECQLCS
Trigger: CGAGCAGAGCTGGCATTCCCAGTTGTTGGAGTTCCT...GCCTTCTCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp TGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGAAGGCGATGAGGACACGCACTaGGAGGTAGAGTGGCCTATA +
Preference number: 4 (lower is better)
Translates to: WLSGMGSEGPKASVLGEGDEDTH*EVEWPI
Trigger: TATAGGCCACTCTACCTCCCAGTGCGTGTCCTCATC...GCCTTCTCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp TGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATCCCCTGAAGGGCCGTGTACCACATTGTTaGAGCAGCGCAGCTCGAATA +
Preference number: 4 (lower is better)
Translates to: WQRAGWEGVLHSGHPLKGRVPHC*SSAARI
Trigger: TATTCGAGCTGCGCTGCTCCAACAATGTGGTACACG...GCCCTTCAGGGGATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp GACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGGGTACACCTCGTGCTaGAAGCTTACCTTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: DTWLSGMGSEGPKASVLGGYTSC*KLTLLS
Trigger: GCTGAGCAAGGTAAGCTTCCAGCACGAGGTGTACCC...TCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp CCCCCTCTCACAGCAGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTAAGAAGAGGGCATCCTaGTCCACATTGAGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: PPLTADWQRAGWEGVLHSKKRAS*STLSRR
Trigger: CCTGCGGCTCAATGTGGACCAGGATGCCCTCTTCTT...ACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCTGCTGTGAGAGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp CCAGACACAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCGCTGTGTCCACCTCCTaGGGCCTCCTGCGAACCAGT +
Preference number: 4 (lower is better)
Translates to: PDTERHLAEWDGVRGSKSAVSTS*GLLRTS
Trigger: ACTGGTTCGCAGGAGGCCCCAGGAGGTGGACACAGC...GCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTGTGTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp GACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAAACCCTTGGAAGAGCTaGACAACCGAGTGCATGGGG +
Preference number: 4 (lower is better)
Translates to: DTWLSGMGSEGPKASVLGNPWKS*TTECMG
Trigger: CCCCATGCACTCGGTTGTCCAGCTCTTCCAAGGGTT...TCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR CCA 90 bp CAGACACAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCCTGTGTCGTAGGCCTTaGCCACACCCTCCCGCAGGT +
Preference number: 4 (lower is better)
Translates to: QTQKDTWLSGMGSEGPKALCRRP*PHPPAG
Trigger: ACCTGCGGGAGGGTGTGGCCAAGGCCTACGACACAG...GGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTGTGTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR CCA 90 bp CCCCCAGACACAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGACACTTGGCTGAGTaGGATGGGGTCCGAGGGTCC +
Preference number: 4 (lower is better)
Translates to: PPDTERHLAEWDGVRGSKRHLAE*DGVRGS
Trigger: GGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCT...TTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTGTGTCTGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR TCA 90 bp GACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGACTCTTTCACACAGTTTaGCCATGGCCACAGCCATCG +
Preference number: 4 (lower is better)
Translates to: DTWLSGMGSEGPKASVLGLFHTV*PWPQPS
Trigger: CGATGGCTGTGGCCATGGTCAAACTGTGTGAAAGAG...TCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000421419.3
CDS-3UTR TCA 90 bp CCCCCAGACACAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAAGGTGCTCTGCAAGTaGAGACTTGGGGCCTCAGGG +
Preference number: 4 (lower is better)
Translates to: PPDTERHLAEWDGVRGSKKVLCK*RLGASG
Trigger: CCCTGAGGCCCCAAGTCTTCACTTGCAGAGCACCTT...TTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTGTGTCTGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR TCA 90 bp GACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAACGTCACAGATGGTCTaGGCTGTATCCAAGATGCCC +
Preference number: 4 (lower is better)
Translates to: DTWLSGMGSEGPKASVLGTSQMV*AVSKMP
Trigger: GGGCATCTTGGATACAGCTCAGACCATCTGTGACGT...TCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR TCA 90 bp TTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGAAGGACGTCACAGATGGTCTaGGCTGTATCCAAGATGCCC +
Preference number: 4 (lower is better)
Translates to: LAEWDGVRGSKSLRPGRRTSQMV*AVSKMP
Trigger: GGGCATCTTGGATACAGCTCAGACCATCTGTGACGT...CCTTCTCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR GCA 90 bp CAGACACAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCCCATCACCCGGAGAGTaGTCCACCCTCACGACAGTG +
Preference number: 4 (lower is better)
Translates to: QTQKDTWLSGMGSEGPKAPSPGE*STLTTV
Trigger: CACTGTCGTGAGGGTGGAGCACTCTCCGGGTGATGG...GGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTGTGTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377264.8
CDS-3UTR GCA 90 bp CCAGACACAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCAGTACTCCAGTCTCTaGACACGGACCTCGACGGCC +
Preference number: 4 (lower is better)
Translates to: PDTERHLAEWDGVRGSKSQYSSL*TRTSTA
Trigger: GGCCGTCGAGGTCCGTGTGCAGAGACTGGAGTACTG...GCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTGTGTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377264.8
CDS-3UTR GCA 90 bp ACAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTTGGAGGCTCTTCCTGTaGCGGGAGCTCCTCGTAGTG +
Preference number: 4 (lower is better)
Translates to: TERHLAEWDGVRGSKSLRWRLFL*RELLVV
Trigger: CACTACGAGGAGCTCCCGGCACAGGAAGAGCCTCCA...ACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR GCA 90 bp TGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATCCCCTGAAGGGCTCGGTGGTAGAGTGTTaGCTTTTCAGCTTCCAGACA +
Preference number: 4 (lower is better)
Translates to: WQRAGWEGVLHSGHPLKGSVVEC*LFSFQT
Trigger: TGTCTGGAAGCTGAAAAGGCAACACTCTACCACCGA...GCCCTTCAGGGGATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR GCA 90 bp CAGACACAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCGTGGCTGGCTCAGTTTaGCCTCGGTGCTCCCTTTCC +
Preference number: 4 (lower is better)
Translates to: QTQKDTWLSGMGSEGPKAVAGSV*PRCSLS
Trigger: GGAAAGGGAGCACCGAGGGCAAACTGAGCCAGCCAC...GGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTGTGTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR GCA 90 bp GACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGAGTCGGCACAGCTGTaGACGTGTACCACATTGTTG +
Preference number: 4 (lower is better)
Translates to: DTWLSGMGSEGPKASVLGESAQL*TCTTLL
Trigger: CAACAATGTGGTACACGTGCACAGCTGTGCCGACTC...TCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR GCA 90 bp TGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGAAGGCCGGGAGCATCAAGGATaGAGAACTCATCACTGTCCA +
Preference number: 4 (lower is better)
Translates to: WLSGMGSEGPKASVLGEGREHQG*RTHHCP
Trigger: TGGACAGTGATGAGTTCTGCATCCTTGATGCTCCCG...GCCTTCTCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR GCA 90 bp CTCACAGCAGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATTTCTTGCGGATGTCCTaGAGCCACTCGTTGAGGGCA +
Preference number: 4 (lower is better)
Translates to: LTADWQRAGWEGVLHSGHFLRMS*SHSLRA
Trigger: TGCCCTCAACGAGTGGCTGCAGGACATCCGCAAGAA...ATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCTGCTGTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR GCA 90 bp ACAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCGGGCAGCTGGTTCTTaGGGATGTCCTGCAGCCACT +
Preference number: 4 (lower is better)
Translates to: TERHLAEWDGVRGSKSLRRAAGS*GCPAAT
Trigger: AGTGGCTGCAGGACATCCGCAAGAACCAGCTGCCCG...ACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR GCA 90 bp TGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGAAGGCAGCAGTGTGAGCTGTATCCAAGATaGCCTCTCGCACTGTGTCGT +
Preference number: 4 (lower is better)
Translates to: WDGVRGSKSLRPGRRQQCELYPR*PLALCR
Trigger: ACGACACAGTGCGAGAGGGCATCTTGGATACAGCTC...ACACTGCTGCCTTCTCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR GCA 90 bp CCAGACACAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCTCCCCGGAGGAAAAGTaGAGAGCCAGGGCTAAGGCC +
Preference number: 4 (lower is better)
Translates to: PDTERHLAEWDGVRGSKSSPEEK*RARAKA
Trigger: GGCCTTAGCCCTGGCTCTGCACTTTTCCTCCGGGGA...GCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTGTGTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR CCA 90 bp CAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCAGATCGAGGCTGAGCTaGTCCAGGCTGAGGTGCTCT +
Preference number: 4 (lower is better)
Translates to: QKDTWLSGMGSEGPKASVRSRLS*SRLRCS
Trigger: AGAGCACCTCAGCCTGGACCAGCTCAGCCTCGATCT...GACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000421419.3
CDS-3UTR CCA 90 bp GACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGACAGGCAAGGGACAGGTaGCTTCCCTCCATCTTCATA +
Preference number: 4 (lower is better)
Translates to: DTWLSGMGSEGPKASVLGQARDR*LPSIFI
Trigger: TATGAAGATGGAGGGAAGCCACCTGTCCCTTGCCTG...TCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp TGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGAAGGCAGCAGTGTCAGGCAAGGGACAGGTaGCTTCCCTCCATCTTCATA +
Preference number: 4 (lower is better)
Translates to: WDGVRGSKSLRPGRRQQCQARDR*LPSIFI
Trigger: TATGAAGATGGAGGGAAGCCACCTGTCCCTTGCCTG...ACACTGCTGCCTTCTCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp CCCCCAGACACAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAACCCACTGTGTGCTGCTaGACTGGGGGTTCACAGTCA +
Preference number: 4 (lower is better)
Translates to: PPDTERHLAEWDGVRGSKPTVCC*TGGSQS
Trigger: TGACTGTGAACCCCCAGTCCAGCAGCACACAGTGGG...TTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTGTGTCTGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp CCTCTCACAGCAGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCGAAAGATGTGGACACTaGGCAGGATCACTTCCAGGC +
Preference number: 4 (lower is better)
Translates to: PLTADWQRAGWEGVLHSGERCGH*AGSLPG
Trigger: GCCTGGAAGTGATCCTGCCCAGTGTCCACATCTTTC...GCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCTGCTGTGAGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp CTCACAGCAGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATGAAGTAGCCAAGTCCTaGCTGGCCACAGTACTGGGA +
Preference number: 4 (lower is better)
Translates to: LTADWQRAGWEGVLHSGHEVAKS*LATVLG
Trigger: TCCCAGTACTGTGGCCAGCCAGGACTTGGCTACTTC...ATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCTGCTGTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp CAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCGAAGGTCCAGGTGACTaGGCAGCGGGTAGTCATCCA +
Preference number: 4 (lower is better)
Translates to: QKDTWLSGMGSEGPKASVEGPGD*AAGSHP
Trigger: TGGATGACTACCCGCTGCCCAGTCACCTGGACCTTC...GACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp TTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGAAGGGATGAGGACACGCACTaGGAGGTAGAGTGGCCTATA +
Preference number: 4 (lower is better)
Translates to: LAEWDGVRGSKSLRPGRRDEDTH*EVEWPI
Trigger: TATAGGCCACTCTACCTCCCAGTGCGTGTCCTCATC...CCTTCTCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp AGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATCCCCTGAAAGCTCGAATAGTGGCTaGCTCAGTTTGCCCTCGGTG +
Preference number: 4 (lower is better)
Translates to: RLATGRLGRRPSQWPSPESSNSG*LSLPSV
Trigger: CACCGAGGGCAAACTGAGCCAGCCACTATTCGAGCT...TTCAGGGGATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp TTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATCCCCTGAAGGGCGTGTACCACATTGTTaGAGCAGCGCAGCTCGAATA +
Preference number: 4 (lower is better)
Translates to: LATGRLGRRPSQWPSPEGRVPHC*SSAARI
Trigger: TATTCGAGCTGCGCTGCTCCAACAATGTGGTACACG...CCCTTCAGGGGATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp CCCCCTCTCACAGCAGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGTGCTCATTACGTACTaGAGCAGGTTGACCAGCAGG +
Preference number: 4 (lower is better)
Translates to: PPLTADWQRAGWEGVLHSVLITY*SRLTSR
Trigger: CCTGCTGGTCAACCTGCTCCAGTACGTAATGAGCAC...ACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCTGCTGTGAGAGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp CCCCCAGACACAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAATAGGTAGACGGAGATaGGCGACGCCTGAGGGAGGT +
Preference number: 4 (lower is better)
Translates to: PPDTERHLAEWDGVRGSKIGRRR*ATPEGG
Trigger: ACCTCCCTCAGGCGTCGCCCATCTCCGTCTACCTAT...TTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTGTGTCTGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp ACAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTTCGGAGCAGTTGAGTTaGGCCAGGCCGATGAGGAGG +
Preference number: 4 (lower is better)
Translates to: TERHLAEWDGVRGSKSLRSEQLS*ARPMRR
Trigger: CCTCCTCATCGGCCTGGCCCAACTCAACTGCTCCGA...ACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp CCAGACACAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCTCGGAGCAGTTGAGTTaGGCCAGGCCGATGAGGAGG +
Preference number: 4 (lower is better)
Translates to: PDTERHLAEWDGVRGSKSSEQLS*ARPMRR
Trigger: CCTCCTCATCGGCCTGGCCCAACTCAACTGCTCCGA...GCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTGTGTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp CCCCCAGACACAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAGTCTCAGCTGTGGCCTaGATAGCCTGTACCAACCGG +
Preference number: 4 (lower is better)
Translates to: PPDTERHLAEWDGVRGSKVSAVA*IACTNR
Trigger: CCGGTTGGTACAGGCTATCCAGGCCACAGCTGAGAC...TTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTGTGTCTGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR CCA 90 bp CAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCCTCTCACAGCAGATTaGCAACGGGCAGGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: QKDTWLSGMGSEGPKASVPLTAD*QRAGWE
Trigger: TTCCCAGCCTGCCCGTTGCCAATCTGCTGTGAGAGG...GACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR CCA 90 bp CAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCAAAAGCCTCCGTCCTaGGAGAAGGCAGCAGTGTGG +
Preference number: 4 (lower is better)
Translates to: QKDTWLSGMGSEGPKASVQKPPS*EKAAVW
Trigger: CCACACTGCTGCCTTCTCCCAGGACGGAGGCTTTTG...GACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR CCA 90 bp CAGACACAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCAGACACTTGGCTGAGTaGGATGGGGTCCGAGGGTCC +
Preference number: 4 (lower is better)
Translates to: QTQKDTWLSGMGSEGPKARHLAE*DGVRGS
Trigger: GGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCT...GGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTGTGTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR CCA 90 bp GACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAACACAGAAAGACACTTaGCTGAGTGGGATGGGGTCC +
Preference number: 4 (lower is better)
Translates to: DTWLSGMGSEGPKASVLGTQKDT*LSGMGS
Trigger: GGACCCCATCCCACTCAGCCAAGTGTCTTTCTGTGT...TCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR TCA 90 bp AGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATCCCCTGAACTCTTTCACACAGTTTaGCCATGGCCACAGCCATCG +
Preference number: 4 (lower is better)
Translates to: RLATGRLGRRPSQWPSPELFHTV*PWPQPS
Trigger: CGATGGCTGTGGCCATGGTCAAACTGTGTGAAAGAG...TTCAGGGGATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000421419.3
CDS-3UTR TCA 90 bp CTCACAGCAGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATTGGCATCAAACTCGGTaGAAAAGTGCGTGGCGAGGT +
Preference number: 4 (lower is better)
Translates to: LTADWQRAGWEGVLHSGHWHQTR*KSAWRG
Trigger: ACCTCGCCACGCACTTTTTCACCGAGTTTGATGCCA...ATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCTGCTGTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR TCA 90 bp CAGACACAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCAAGCGTGGTCGAAGGTaGTGGAAGTCTCGGGAACCG +
Preference number: 4 (lower is better)
Translates to: QTQKDTWLSGMGSEGPKAKRGRR*WKSREP
Trigger: CGGTTCCCGAGACTTCCATCACCTTCGACCACGCTT...GGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTGTGTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR TCA 90 bp GACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGGCCAGCTTGAAGGCTaGCTTGCACATCTTAAAGCT +
Preference number: 4 (lower is better)
Translates to: DTWLSGMGSEGPKASVLGGQLEG*LAHLKA
Trigger: AGCTTTAAGATGTGCAAGTCAGCCTTCAAGCTGGCC...TCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR TCA 90 bp CCAGACACAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCAGTACTGGGAGACGCTaGAGAGGGTACCGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: PDTERHLAEWDGVRGSKSSTGRR*RGYRAP
Trigger: TGGAGCACGGTACCCTCTTCAGCGTCTCCCAGTACT...GCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTGTGTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR GCA 90 bp CAGACACAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCAGCACCTCCAGCTaGCCGAAGTGCACTTCCATG +
Preference number: 4 (lower is better)
Translates to: QTQKDTWLSGMGSEGPKASSTSS*PKCTSM
Trigger: CATGGAAGTGCACTTCGGGCAGCTGGAGGTGCTGGA...GGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTGTGTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR GCA 90 bp GACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGATCTCGTAGACCTCCTTaGTGGGCAGAAAGATGTGGA +
Preference number: 4 (lower is better)
Translates to: DTWLSGMGSEGPKASVLGSRRPP*WAERCG
Trigger: TCCACATCTTTCTGCCCAGCAAGGAGGTCTACGAGA...TCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR GCA 90 bp CCAGACACAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCGGTGGGAAGCAGATCTaGAGGCTCCCACATGAGCAG +
Preference number: 4 (lower is better)
Translates to: PDTERHLAEWDGVRGSKSGGKQI*RLPHEQ
Trigger: CTGCTCATGTGGGAGCCTGCAGATCTGCTTCCCACC...GCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTGTGTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp CAGACACAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCAGATCGAGGCTGAGCTaGTCCAGGCTGAGGTGCTCT +
Preference number: 4 (lower is better)
Translates to: QTQKDTWLSGMGSEGPKARSRLS*SRLRCS
Trigger: AGAGCACCTCAGCCTGGACCAGCTCAGCCTCGATCT...GGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTGTGTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000421419.3
CDS-3UTR CCA 90 bp GGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGAAGGCAGCAGTGTGGGAAGCACAGTCTCAATaGTCTGGGCAAACATCTCCA +
Preference number: 4 (lower is better)
Translates to: GWGPRVQKPPSWEKAAVWEAQSQ*SGQTSP
Trigger: TGGAGATGTTTGCCCAGACCATTGAGACTGTGCTTC...CCACACTGCTGCCTTCTCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377264.8
CDS-3UTR CCA 90 bp CAGACACAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCCCTGCCTGCAGCTGCTaGTTCAGGTCCTGCTCAATC +
Preference number: 4 (lower is better)
Translates to: QTQKDTWLSGMGSEGPKAPACSC*FRSCSI
Trigger: GATTGAGCAGGACCTGAACCAGCAGCTGCAGGCAGG...GGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTGTGTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp TTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGAAGGATCCGAGTCCGAGTCTaGGGTGAGATCAAAGCAGTT +
Preference number: 4 (lower is better)
Translates to: LAEWDGVRGSKSLRPGRRIRVRV*GEIKAV
Trigger: AACTGCTTTGATCTCACCCCAGACTCGGACTCGGAT...CCTTCTCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp ACAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTGAAGGTCCAGGTGACTaGGCAGCGGGTAGTCATCCA +
Preference number: 4 (lower is better)
Translates to: TERHLAEWDGVRGSKSLREGPGD*AAGSHP
Trigger: TGGATGACTACCCGCTGCCCAGTCACCTGGACCTTC...ACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp CAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCTGTAGTGGCGCAAGGTaGCTTTGTGCAACCGCAGTG +
Preference number: 4 (lower is better)
Translates to: QKDTWLSGMGSEGPKASVCSGAR*LCATAV
Trigger: CACTGCGGTTGCACAAAGCCACCTTGCGCCACTACA...GACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp CTCACAGCAGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATAGGAACTCCAACAACTaGGAATGCCAGCTCTGCTCG +
Preference number: 4 (lower is better)
Translates to: LTADWQRAGWEGVLHSGHRNSNN*ECQLCS
Trigger: CGAGCAGAGCTGGCATTCCCAGTTGTTGGAGTTCCT...ATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCTGCTGTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp CCCCCAGACACAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCTCGAATAGTGGCTaGCTCAGTTTGCCCTCGGTG +
Preference number: 4 (lower is better)
Translates to: PPDTERHLAEWDGVRGSKSSNSG*LSLPSV
Trigger: CACCGAGGGCAAACTGAGCCAGCCACTATTCGAGCT...TTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTGTGTCTGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp CAGACACAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCTGTACTGCTCAATaGGCAGCCACAGCAGGTCCC +
Preference number: 4 (lower is better)
Translates to: QTQKDTWLSGMGSEGPKASCTAQ*AATAGP
Trigger: GGGACCTGCTGTGGCTGCCCATTGAGCAGTACAGGA...GGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTGTGTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR CCA 90 bp CCAGACACAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCGTCTCAGCTGTGGCCTaGATAGCCTGTACCAACCGG +
Preference number: 4 (lower is better)
Translates to: PDTERHLAEWDGVRGSKSVSAVA*IACTNR
Trigger: CCGGTTGGTACAGGCTATCCAGGCCACAGCTGAGAC...GCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTGTGTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR CCA 90 bp ACAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTCTCACAGCAGATTaGCAACGGGCAGGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: TERHLAEWDGVRGSKSLRPLTAD*QRAGWE
Trigger: TTCCCAGCCTGCCCGTTGCCAATCTGCTGTGAGAGG...ACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR TCA 90 bp AGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATCCCCTGAAGGCCAGCTTGAAGGCTaGCTTGCACATCTTAAAGCT +
Preference number: 4 (lower is better)
Translates to: RLATGRLGRRPSQWPSPEGQLEG*LAHLKA
Trigger: AGCTTTAAGATGTGCAAGTCAGCCTTCAAGCTGGCC...TTCAGGGGATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR TCA 90 bp ACAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCACCTGGTCCATCGTaGCGTGCTTGCCATGGTAAT +
Preference number: 4 (lower is better)
Translates to: TERHLAEWDGVRGSKSLRPPGPS*RACHGN
Trigger: ATTACCATGGCAAGCACGTCACGATGGACCAGGTGG...ACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR TCA 90 bp TTCATGCAGACACTGACCCACGCACTCACGGAGCTTAAAAATAATACATCGAACACAGTGGCCATCCCCTaGAGGGCCAGGCCGGGCCGG +
Preference number: 4 (lower is better)
Translates to: FMQTLTHALTELKNNTSNTVAIP*RARPGR
Trigger: CCGGCCCGGCCTGGCCCTTCAGGGGATGGCCACTGT...GTTCGATGTATTATTTTTAAGCTCCGTGAGTGCGTGGGTCAGTGTCTGCATGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR GCA 90 bp CAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCTGCTGGTTCAGGTCCTaGTCAATCAGCCACAGGTCT +
Preference number: 4 (lower is better)
Translates to: QKDTWLSGMGSEGPKASVCWFRS*SISHRS
Trigger: AGACCTGTGGCTGATTGAGCAGGACCTGAACCAGCA...GACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR GCA 90 bp CAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCAACTCGGTGAAAAAGTaGGTGGCGAGGTCAGGTGGT +
Preference number: 4 (lower is better)
Translates to: QKDTWLSGMGSEGPKASVNSVKK*VARSGG
Trigger: ACCACCTGACCTCGCCACGCACTTTTTCACCGAGTT...GACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR GCA 90 bp CAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCGAGAACAGGTGTGTGTaGAGGATGGTGATGACCGTC +
Preference number: 4 (lower is better)
Translates to: QKDTWLSGMGSEGPKASVENRCV*RMVMTV
Trigger: GACGGTCATCACCATCCTGCACACACACCTGTTCTC...GACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR GCA 90 bp CAGACACTGACCCACGCACTCACGGAGCTTAAAAATAATACATCGAACCACACGGCCCTTCCAGGGGGCTaGTGGGCTGGGCTCGAGTCT +
Preference number: 4 (lower is better)
Translates to: QTLTHALTELKNNTSNHTALPGG*WAGLES
Trigger: AGACTCGAGCCCAGCCCAGCAGCCCCCTGGAAGGGC...CGTGTGGTTCGATGTATTATTTTTAAGCTCCGTGAGTGCGTGGGTCAGTGTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR GCA 90 bp CAGACACAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTTCTTGCGGATGTCCTaGAGCCACTCGTTGAGGGCA +
Preference number: 4 (lower is better)
Translates to: QTQKDTWLSGMGSEGPKAFLRMS*SHSLRA
Trigger: TGCCCTCAACGAGTGGCTGCAGGACATCCGCAAGAA...GGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTGTGTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR GCA 90 bp CCAGACACAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCCATCCTTCCTGTACTaGTCAATGGGCAGCCACAGC +
Preference number: 4 (lower is better)
Translates to: PDTERHLAEWDGVRGSKSPSFLY*SMGSHS
Trigger: GCTGTGGCTGCCCATTGAGCAGTACAGGAAGGATGG...GCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTGTGTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR GCA 90 bp CCCCCAGACACAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAGAGCTGTATCCAAGATaGCCTCTCGCACTGTGTCGT +
Preference number: 4 (lower is better)
Translates to: PPDTERHLAEWDGVRGSKELYPR*PLALCR
Trigger: ACGACACAGTGCGAGAGGGCATCTTGGATACAGCTC...TTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTGTGTCTGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR GCA 90 bp CAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCGAGCTGTATCCAAGATaGCCTCTCGCACTGTGTCGT +
Preference number: 4 (lower is better)
Translates to: QKDTWLSGMGSEGPKASVELYPR*PLALCR
Trigger: ACGACACAGTGCGAGAGGGCATCTTGGATACAGCTC...GACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR CCA 90 bp ACAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTGACCAGATTTCCAGGTaGATGTCTCGCAGGGCAACG +
Preference number: 4 (lower is better)
Translates to: TERHLAEWDGVRGSKSLRDQISR*MSRRAT
Trigger: CGTTGCCCTGCGAGACATCCACCTGGAAATCTGGTC...ACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000421419.3
CDS-3UTR CCA 90 bp CAGACACAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCAGGTGGTCCGGAAGATaGGGCAGACGTCTGAAGCAA +
Preference number: 4 (lower is better)
Translates to: QTQKDTWLSGMGSEGPKARWSGR*GRRLKQ
Trigger: TTGCTTCAGACGTCTGCCCCATCTTCCGGACCACCT...GGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTGTGTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp CAGACACAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCACAGTCACCACTACCTaGGGCAGGAAGTACTTGCGC +
Preference number: 4 (lower is better)
Translates to: QTQKDTWLSGMGSEGPKATVTTT*GRKYLR
Trigger: GCGCAAGTACTTCCTGCCCCAGGTAGTGGTGACTGT...GGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTGTGTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp CAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCGTAGACCTCCTTGCTaGGCAGAAAGATGTGGACAC +
Preference number: 4 (lower is better)
Translates to: QKDTWLSGMGSEGPKASVRRPPC*AERCGH
Trigger: GTGTCCACATCTTTCTGCCCAGCAAGGAGGTCTACG...GACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp ACAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCCACTGAGAAGAAGTaGGCATCCTCGTCATCCGAG +
Preference number: 4 (lower is better)
Translates to: TERHLAEWDGVRGSKSLRPTEKK*ASSSSE
Trigger: CTCGGATGACGAGGATGCCCACTTCTTCTCAGTGGG...ACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp CAGACACTGACCCACGCACTCACGGAGCTTAAAAATAATACATCGAACCACACGGAGGGCCGTCTCCACTaGGGGGCACGAGGGCAGAGA +
Preference number: 4 (lower is better)
Translates to: QTLTHALTELKNNTSNHTEGRLH*GARGQR
Trigger: TCTCTGCCCTCGTGCCCCCCAGTGGAGACGGCCCTC...CGTGTGGTTCGATGTATTATTTTTAAGCTCCGTGAGTGCGTGGGTCAGTGTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp AGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATCCCCTGAACTTACCTTGCTCAGCTaGATCTCCATGAGGACATGG +
Preference number: 4 (lower is better)
Translates to: RLATGRLGRRPSQWPSPELTLLS*ISMRTW
Trigger: CCATGTCCTCATGGAGATCCAGCTGAGCAAGGTAAG...TTCAGGGGATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp CACTCACGGAGCTTAAAAATAATACATCGAACCACACGGATATCATCCCCTCCTCCTCCAGCTCCTGGCTaGGGGCCGCAGGGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: HSRSLKIIHRTTRISSPPPPAPG*GPQGLW
Trigger: CCACAGGCCCTGCGGCCCCCAGCCAGGAGCTGGAGG...AGGAGGGGATGATATCCGTGTGGTTCGATGTATTATTTTTAAGCTCCGTGAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp ACAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTGCAAAAGTGCCCACCTaGTCCATCGTGACGTGCTTG +
Preference number: 4 (lower is better)
Translates to: TERHLAEWDGVRGSKSLRAKVPT*SIVTCL
Trigger: CAAGCACGTCACGATGGACCAGGTGGGCACTTTTGC...ACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp CAGACACAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCAACCCTTGGAAGAGCTaGACAACCGAGTGCATGGGG +
Preference number: 4 (lower is better)
Translates to: QTQKDTWLSGMGSEGPKANPWKS*TTECMG
Trigger: CCCCATGCACTCGGTTGTCCAGCTCTTCCAAGGGTT...GGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTGTGTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR CCA 90 bp GACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAATGCCACGTCACAGATaGTCTGAGCTGTATCCAAGA +
Preference number: 4 (lower is better)
Translates to: DTWLSGMGSEGPKASVLGMPRHR*SELYPR
Trigger: TCTTGGATACAGCTCAGACCATCTGTGACGTGGCAT...TCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR CCA 90 bp TTCATGCAGACACTGACCCACGCACTCACGGAGCTTAAAAATAATACATCGAACGTGGGCAGCACCCTCTaGGTGCCGGGCACCCCAGGC +
Preference number: 4 (lower is better)
Translates to: FMQTLTHALTELKNNTSNVGSTL*VPGTPG
Trigger: GCCTGGGGTGCCCGGCACCCAGAGGGTGCTGCCCAC...GTTCGATGTATTATTTTTAAGCTCCGTGAGTGCGTGGGTCAGTGTCTGCATGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR TCA 90 bp CCAGACACAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCACGTCACAGATGGTCTaGGCTGTATCCAAGATGCCC +
Preference number: 4 (lower is better)
Translates to: PDTERHLAEWDGVRGSKSTSQMV*AVSKMP
Trigger: GGGCATCTTGGATACAGCTCAGACCATCTGTGACGT...GCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTGTGTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR GCA 90 bp CCAGACACAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCAACTCGGTGAAAAAGTaGGTGGCGAGGTCAGGTGGT +
Preference number: 4 (lower is better)
Translates to: PDTERHLAEWDGVRGSKSNSVKK*VARSGG
Trigger: ACCACCTGACCTCGCCACGCACTTTTTCACCGAGTT...GCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTGTGTCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR GCA 90 bp CCAGACACAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCGAGAACAGGTGTGTGTaGAGGATGGTGATGACCGTC +
Preference number: 4 (lower is better)
Translates to: PDTERHLAEWDGVRGSKSENRCV*RMVMTV
Trigger: GACGGTCATCACCATCCTGCACACACACCTGTTCTC...GCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTGTGTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR GCA 90 bp CAGACACTGACCCACGCACTCACGGAGCTTAAAAATAATACATCGAACCACACGCCCGCAGCAAGTCCGTaGTGCCGATCGGCCGTGAGA +
Preference number: 4 (lower is better)
Translates to: QTLTHALTELKNNTSNHTPAASP*CRSAVR
Trigger: TCTCACGGCCGATCGGCAGCACGGACTTGCTGCGGG...CGTGTGGTTCGATGTATTATTTTTAAGCTCCGTGAGTGCGTGGGTCAGTGTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp CCAGACACAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCGAAAGATGTGGACACTaGGCAGGATCACTTCCAGGC +
Preference number: 4 (lower is better)
Translates to: PDTERHLAEWDGVRGSKSERCGH*AGSLPG
Trigger: GCCTGGAAGTGATCCTGCCCAGTGTCCACATCTTTC...GCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTGTGTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp CAGACACTGACCCACGCACTCACGGAGCTTAAAAATAATACATCGAACCACACGCGATGGGTAGATGGTTaGGGCCAGCTGAGCCGGGGG +
Preference number: 4 (lower is better)
Translates to: QTLTHALTELKNNTSNHTRWVDG*GQLSRG
Trigger: CCCCCGGCTCAGCTGGCCCCAACCATCTACCCATCG...CGTGTGGTTCGATGTATTATTTTTAAGCTCCGTGAGTGCGTGGGTCAGTGTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp CAGACACAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCGTGCTCATTACGTACTaGAGCAGGTTGACCAGCAGG +
Preference number: 4 (lower is better)
Translates to: QTQKDTWLSGMGSEGPKAVLITY*SRLTSR
Trigger: CCTGCTGGTCAACCTGCTCCAGTACGTAATGAGCAC...GGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTGTGTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp TTCATGCAGACACTGACCCACGCACTCACGGAGCTTAAAAATAATACATCGAACAGGGGGCTGCTGGGCTaGGCTCGAGTCTCGGGGCGA +
Preference number: 4 (lower is better)
Translates to: FMQTLTHALTELKNNTSNRGLLG*ARVSGR
Trigger: TCGCCCCGAGACTCGAGCCCAGCCCAGCAGCCCCCT...GTTCGATGTATTATTTTTAAGCTCCGTGAGTGCGTGGGTCAGTGTCTGCATGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp ACAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTACACAGAAAGACACTTaGCTGAGTGGGATGGGGTCC +
Preference number: 4 (lower is better)
Translates to: TERHLAEWDGVRGSKSLRTQKDT*LSGMGS
Trigger: GGACCCCATCCCACTCAGCCAAGTGTCTTTCTGTGT...ACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR TCA 90 bp CAGACACTGACCCACGCACTCACGGAGCTTAAAAATAATACATCGAACCACACGGCTGCCGATCGGCCGTaGGAAGTAACCGTCCCTCAC +
Preference number: 4 (lower is better)
Translates to: QTLTHALTELKNNTSNHTAADRP*EVTVPH
Trigger: GTGAGGGACGGTTACTTCTCACGGCCGATCGGCAGC...CGTGTGGTTCGATGTATTATTTTTAAGCTCCGTGAGTGCGTGGGTCAGTGTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR GCA 90 bp CAGACACTGACCCACGCACTCACGGAGCTTAAAAATAATACATCGAACCACACGAGCTCCCAGGACAGCTaGACGGCTGTGCCCGTTAGC +
Preference number: 4 (lower is better)
Translates to: QTLTHALTELKNNTSNHTSSQDS*TAVPVS
Trigger: GCTAACGGGCACAGCCGTGCAGCTGTCCTGGGAGCT...CGTGTGGTTCGATGTATTATTTTTAAGCTCCGTGAGTGCGTGGGTCAGTGTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR GCA 90 bp CCCCCAGACACAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAATCGGTGGTAGAGTGTTaGCTTTTCAGCTTCCAGACA +
Preference number: 4 (lower is better)
Translates to: PPDTERHLAEWDGVRGSKSVVEC*LFSFQT
Trigger: TGTCTGGAAGCTGAAAAGGCAACACTCTACCACCGA...TTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTGTGTCTGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR GCA 90 bp CACTCACGGAGCTTAAAAATAATACATCGAACCACACGGATATCATCCCCTCCTGCCCTTCCAGGGGGCTaGTGGGCTGGGCTCGAGTCT +
Preference number: 4 (lower is better)
Translates to: HSRSLKIIHRTTRISSPPALPGG*WAGLES
Trigger: AGACTCGAGCCCAGCCCAGCAGCCCCCTGGAAGGGC...AGGAGGGGATGATATCCGTGTGGTTCGATGTATTATTTTTAAGCTCCGTGAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp TTCATGCAGACACTGACCCACGCACTCACGGAGCTTAAAAATAATACATCGAACGGCCGAGCTGAGGCCTaGGAGCCCAGCGTACCAGGA +
Preference number: 4 (lower is better)
Translates to: FMQTLTHALTELKNNTSNGRAEA*EPSVPG
Trigger: TCCTGGTACGCTGGGCTCCCAGGCCTCAGCTCGGCC...GTTCGATGTATTATTTTTAAGCTCCGTGAGTGCGTGGGTCAGTGTCTGCATGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp CAGACACTGACCCACGCACTCACGGAGCTTAAAAATAATACATCGAACCACACGTGTCAGCAGGCCGGCTaGAGGCTCAGCAGGTACGGT +
Preference number: 4 (lower is better)
Translates to: QTLTHALTELKNNTSNHTCQQAG*RLSRYG
Trigger: ACCGTACCTGCTGAGCCTCCAGCCGGCCTGCTGACA...CGTGTGGTTCGATGTATTATTTTTAAGCTCCGTGAGTGCGTGGGTCAGTGTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp CCAGACACAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCATCCGAGTCCGAGTCTaGGGTGAGATCAAAGCAGTT +
Preference number: 4 (lower is better)
Translates to: PDTERHLAEWDGVRGSKSIRVRV*GEIKAV
Trigger: AACTGCTTTGATCTCACCCCAGACTCGGACTCGGAT...GCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTGTGTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp CAGACACTGACCCACGCACTCACGGAGCTTAAAAATAATACATCGAACCACACGCTGTGTCGTAGGCCTTaGCCACACCCTCCCGCAGGT +
Preference number: 4 (lower is better)
Translates to: QTLTHALTELKNNTSNHTLCRRP*PHPPAG
Trigger: ACCTGCGGGAGGGTGTGGCCAAGGCCTACGACACAG...CGTGTGGTTCGATGTATTATTTTTAAGCTCCGTGAGTGCGTGGGTCAGTGTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR CCA 90 bp CACTCACGGAGCTTAAAAATAATACATCGAACCACACGGATATCATCCCCTCCTCGCCACTTGAGGGCGTaGTCCTTGTGGGCGTCGGGG +
Preference number: 4 (lower is better)
Translates to: HSRSLKIIHRTTRISSPPRHLRA*SLWASG
Trigger: CCCCGACGCCCACAAGGACCACGCCCTCAAGTGGCG...AGGAGGGGATGATATCCGTGTGGTTCGATGTATTATTTTTAAGCTCCGTGAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR GCA 90 bp CAGACACTGACCCACGCACTCACGGAGCTTAAAAATAATACATCGAACCACACGACAGCTGCACGGCTGTaGCCGTTAGCCGAACATGGC +
Preference number: 4 (lower is better)
Translates to: QTLTHALTELKNNTSNHTTAARL*PLAEHG
Trigger: GCCATGTTCGGCTAACGGGCACAGCCGTGCAGCTGT...CGTGTGGTTCGATGTATTATTTTTAAGCTCCGTGAGTGCGTGGGTCAGTGTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR GCA 90 bp CACTCACGGAGCTTAAAAATAATACATCGAACCACACGGATATCATCCCCTCCTGCTGCAGCGGGACAGTaGCAGGGTCCGGCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: HSRSLKIIHRTTRISSPPAAAGQ*QGPALE
Trigger: TTCCAGAGCCGGACCCTGGCACTGTCCCGCTGCAGC...AGGAGGGGATGATATCCGTGTGGTTCGATGTATTATTTTTAAGCTCCGTGAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR GCA 90 bp CAGACACTGACCCACGCACTCACGGAGCTTAAAAATAATACATCGAACCACACGGTAGCACCACCCGAGTaGTGGGCACTGGGAAATGGG +
Preference number: 4 (lower is better)
Translates to: QTLTHALTELKNNTSNHTVAPPE*WALGNG
Trigger: CCCATTTCCCAGTGCCCAGCACTCGGGTGGTGCTAC...CGTGTGGTTCGATGTATTATTTTTAAGCTCCGTGAGTGCGTGGGTCAGTGTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR GCA 90 bp CACTCACGGAGCTTAAAAATAATACATCGAACCACACGGATATCATCCCCTCCTGCGGGAGACGGGGGCTaGCGGGGACAGGATGTCATA +
Preference number: 4 (lower is better)
Translates to: HSRSLKIIHRTTRISSPPAGDGG*RGQDVI
Trigger: TATGACATCCTGTCCCCGGCAGCCCCCGTCTCCCGC...AGGAGGGGATGATATCCGTGTGGTTCGATGTATTATTTTTAAGCTCCGTGAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR CCA 90 bp CAGACACTGACCCACGCACTCACGGAGCTTAAAAATAATACATCGAACCACACGAGCTCTGACCGGAACTaGGGCTCACTCAGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: QTLTHALTELKNNTSNHTSSDRN*GSLSSS
Trigger: GCTGGAGCTGAGTGAGCCCCAGTTCCGGTCAGAGCT...CGTGTGGTTCGATGTATTATTTTTAAGCTCCGTGAGTGCGTGGGTCAGTGTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp CACTCACGGAGCTTAAAAATAATACATCGAACCACACGGATATCATCCCCTCCTGGACAACCGAGTGCATaGGGCCCACGCCTCCCAGCA +
Preference number: 4 (lower is better)
Translates to: HSRSLKIIHRTTRISSPPGQPSA*GPRLPA
Trigger: TGCTGGGAGGCGTGGGCCCCATGCACTCGGTTGTCC...AGGAGGGGATGATATCCGTGTGGTTCGATGTATTATTTTTAAGCTCCGTGAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR CCA 90 bp ACAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTATGCCACGTCACAGATaGTCTGAGCTGTATCCAAGA +
Preference number: 4 (lower is better)
Translates to: TERHLAEWDGVRGSKSLRMPRHR*SELYPR
Trigger: TCTTGGATACAGCTCAGACCATCTGTGACGTGGCAT...ACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR CCA 90 bp TTCATGCAGACACTGACCCACGCACTCACGGAGCTTAAAAATAATACATCGAACGCGTCGGGGACAATCTaGTTGCGCATGCCCCCGAGC +
Preference number: 4 (lower is better)
Translates to: FMQTLTHALTELKNNTSNASGTI*LRMPPS
Trigger: GCTCGGGGGCATGCGCAACCAGATTGTCCCCGACGC...GTTCGATGTATTATTTTTAAGCTCCGTGAGTGCGTGGGTCAGTGTCTGCATGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp TTCATGCAGACACTGACCCACGCACTCACGGAGCTTAAAAATAATACATCGAACCCCCAGGCTCAGTCTTaGGCACTGTCCGAGCGCCAC +
Preference number: 4 (lower is better)
Translates to: FMQTLTHALTELKNNTSNPQAQS*ALSERH
Trigger: GTGGCGCTCGGACAGTGCCCAAGACTGAGCCTGGGG...GTTCGATGTATTATTTTTAAGCTCCGTGAGTGCGTGGGTCAGTGTCTGCATGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR TCA 90 bp TTCATGCAGACACTGACCCACGCACTCACGGAGCTTAAAAATAATACATCGAACCCTGCAGCCACTCGTTaGGGGCATAGCCCAGCACCT +
Preference number: 4 (lower is better)
Translates to: FMQTLTHALTELKNNTSNPAATR*GHSPAP
Trigger: AGGTGCTGGGCTATGCCCTCAACGAGTGGCTGCAGG...GTTCGATGTATTATTTTTAAGCTCCGTGAGTGCGTGGGTCAGTGTCTGCATGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR GCA 90 bp CACTCACGGAGCTTAAAAATAATACATCGAACCACACGGATATCATCCCCTCCTAGCTCCCAGGACAGCTaGACGGCTGTGCCCGTTAGC +
Preference number: 4 (lower is better)
Translates to: HSRSLKIIHRTTRISSPPSSQDS*TAVPVS
Trigger: GCTAACGGGCACAGCCGTGCAGCTGTCCTGGGAGCT...AGGAGGGGATGATATCCGTGTGGTTCGATGTATTATTTTTAAGCTCCGTGAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR GCA 90 bp CACTCACGGAGCTTAAAAATAATACATCGAACCACACGGATATCATCCCCTCCTAGCATGACCCTAAGCTaGCAGCAGGGCCCCCGACAG +
Preference number: 4 (lower is better)
Translates to: HSRSLKIIHRTTRISSPPSMTLS*QQGPRQ
Trigger: CTGTCGGGGGCCCTGCTGGCAGCTTAGGGTCATGCT...AGGAGGGGATGATATCCGTGTGGTTCGATGTATTATTTTTAAGCTCCGTGAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR GCA 90 bp CAGACACTGACCCACGCACTCACGGAGCTTAAAAATAATACATCGAACCACACGGTAGTGGGGGCCACATaGAGCGCTTTGATGGTGAGC +
Preference number: 4 (lower is better)
Translates to: QTLTHALTELKNNTSNHTVVGAT*SALMVS
Trigger: GCTCACCATCAAAGCGCTGCATGTGGCCCCCACTAC...CGTGTGGTTCGATGTATTATTTTTAAGCTCCGTGAGTGCGTGGGTCAGTGTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp TTCATGCAGACACTGACCCACGCACTCACGGAGCTTAAAAATAATACATCGAACTCAGCCAGGCCCTCGTaGTCTGTAAGGCTCACGGCG +
Preference number: 4 (lower is better)
Translates to: FMQTLTHALTELKNNTSNSARPS*SVRLTA
Trigger: CGCCGTGAGCCTTACAGACCACGAGGGCCTGGCTGA...GTTCGATGTATTATTTTTAAGCTCCGTGAGTGCGTGGGTCAGTGTCTGCATGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp CAGACACTGACCCACGCACTCACGGAGCTTAAAAATAATACATCGAACCACACGGGCCCTCTGGAAGCGTaGTCGAAGGTGATGGAAGTC +
Preference number: 4 (lower is better)
Translates to: QTLTHALTELKNNTSNHTGPLEA*SKVMEV
Trigger: GACTTCCATCACCTTCGACCACGCTTCCAGAGGGCC...CGTGTGGTTCGATGTATTATTTTTAAGCTCCGTGAGTGCGTGGGTCAGTGTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp TTCATGCAGACACTGACCCACGCACTCACGGAGCTTAAAAATAATACATCGAACAGTGCACTTCCATGCTaGTTGTCCGCCGGCCCCGAC +
Preference number: 4 (lower is better)
Translates to: FMQTLTHALTELKNNTSNSALPC*LSAGPD
Trigger: GTCGGGGCCGGCGGACAACCAGCATGGAAGTGCACT...GTTCGATGTATTATTTTTAAGCTCCGTGAGTGCGTGGGTCAGTGTCTGCATGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp TTCATGCAGACACTGACCCACGCACTCACGGAGCTTAAAAATAATACATCGAACCTGCAAGTGAAGACTTaGGGCCTCAGGGGCAGCGGC +
Preference number: 4 (lower is better)
Translates to: FMQTLTHALTELKNNTSNLQVKT*GLRGSG
Trigger: GCCGCTGCCCCTGAGGCCCCAAGTCTTCACTTGCAG...GTTCGATGTATTATTTTTAAGCTCCGTGAGTGCGTGGGTCAGTGTCTGCATGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp CACTCACGGAGCTTAAAAATAATACATCGAACCACACGGATATCATCCCCTCCTTCGGCCAGGTCACGCTaGTTGATGAGGGCCGTCTCC +
Preference number: 4 (lower is better)
Translates to: HSRSLKIIHRTTRISSPPSARSR*LMRAVS
Trigger: GGAGACGGCCCTCATCAACCAGCGTGACCTGGCCGA...AGGAGGGGATGATATCCGTGTGGTTCGATGTATTATTTTTAAGCTCCGTGAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp TTCATGCAGACACTGACCCACGCACTCACGGAGCTTAAAAATAATACATCGAACGGGAAGGGGAGCTCCTaGGACCTGAGAGGCCAGTTC +
Preference number: 4 (lower is better)
Translates to: FMQTLTHALTELKNNTSNGKGSS*DLRGQF
Trigger: GAACTGGCCTCTCAGGTCCCAGGAGCTCCCCTTCCC...GTTCGATGTATTATTTTTAAGCTCCGTGAGTGCGTGGGTCAGTGTCTGCATGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp TTCATGCAGACACTGACCCACGCACTCACGGAGCTTAAAAATAATACATCGAACAGCAGGCCGGGCAGCTaGTTCTTGCGGATGTCCTGC +
Preference number: 4 (lower is better)
Translates to: FMQTLTHALTELKNNTSNSRPGS*FLRMSC
Trigger: GCAGGACATCCGCAAGAACCAGCTGCCCGGCCTGCT...GTTCGATGTATTATTTTTAAGCTCCGTGAGTGCGTGGGTCAGTGTCTGCATGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp CAGACACTGACCCACGCACTCACGGAGCTTAAAAATAATACATCGAACCACACGGTCTCAGCTGTGGCCTaGATAGCCTGTACCAACCGG +
Preference number: 4 (lower is better)
Translates to: QTLTHALTELKNNTSNHTVSAVA*IACTNR
Trigger: CCGGTTGGTACAGGCTATCCAGGCCACAGCTGAGAC...CGTGTGGTTCGATGTATTATTTTTAAGCTCCGTGAGTGCGTGGGTCAGTGTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR CCA 90 bp CACTCACGGAGCTTAAAAATAATACATCGAACCACACGGATATCATCCCCTCCTAGCCCCTTCTGCTCATaGCCCCGCGATGCCACGTCA +
Preference number: 4 (lower is better)
Translates to: HSRSLKIIHRTTRISSPPSPFCS*PRDATS
Trigger: TGACGTGGCATCGCGGGGCCATGAGCAGAAGGGGCT...AGGAGGGGATGATATCCGTGTGGTTCGATGTATTATTTTTAAGCTCCGTGAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR GCA 90 bp CACTCACGGAGCTTAAAAATAATACATCGAACCACACGGATATCATCCCCTCCTAGCCGAAATACCGTCTaGTGCTCCATCGCCGGCAGG +
Preference number: 4 (lower is better)
Translates to: HSRSLKIIHRTTRISSPPSRNTV*CSIAGR
Trigger: CCTGCCGGCGATGGAGCAGCAGACGGTATTTCGGCT...AGGAGGGGATGATATCCGTGTGGTTCGATGTATTATTTTTAAGCTCCGTGAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR GCA 90 bp CAGACACTGACCCACGCACTCACGGAGCTTAAAAATAATACATCGAACCACACGATCTTAAAGCTGTCGTaGCAGAAGCCTGAGGGGCCG +
Preference number: 4 (lower is better)
Translates to: QTLTHALTELKNNTSNHTILKLS*QKPEGP
Trigger: CGGCCCCTCAGGCTTCTGGCACGACAGCTTTAAGAT...CGTGTGGTTCGATGTATTATTTTTAAGCTCCGTGAGTGCGTGGGTCAGTGTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR GCA 90 bp TTCATGCAGACACTGACCCACGCACTCACGGAGCTTAAAAATAATACATCGAACGGGGGTCCAGGTGGATaGGCACAGCAGTGGACAACA +
Preference number: 4 (lower is better)
Translates to: FMQTLTHALTELKNNTSNGGPGG*AQQWTT
Trigger: TGTTGTCCACTGCTGTGCGCATCCACCTGGACCCCC...GTTCGATGTATTATTTTTAAGCTCCGTGAGTGCGTGGGTCAGTGTCTGCATGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR GCA 90 bp CACTCACGGAGCTTAAAAATAATACATCGAACCACACGGATATCATCCCCTCCTGTGGCTGGCTCAGTTTaGCCTCGGTGCTCCCTTTCC +
Preference number: 4 (lower is better)
Translates to: HSRSLKIIHRTTRISSPPVAGSV*PRCSLS
Trigger: GGAAAGGGAGCACCGAGGGCAAACTGAGCCAGCCAC...AGGAGGGGATGATATCCGTGTGGTTCGATGTATTATTTTTAAGCTCCGTGAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR GCA 90 bp CACTCACGGAGCTTAAAAATAATACATCGAACCACACGGATATCATCCCCTCCTGCAGCAAGTCCGTGCTaGCGATCGGCCGTGAGAAGT +
Preference number: 4 (lower is better)
Translates to: HSRSLKIIHRTTRISSPPAASPC*RSAVRS
Trigger: ACTTCTCACGGCCGATCGGCAGCACGGACTTGCTGC...AGGAGGGGATGATATCCGTGTGGTTCGATGTATTATTTTTAAGCTCCGTGAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR GCA 90 bp TTCATGCAGACACTGACCCACGCACTCACGGAGCTTAAAAATAATACATCGAACTGGGAAATGGGCAGGTaGCCGCAGCAAGTCCGTGCT +
Preference number: 4 (lower is better)
Translates to: FMQTLTHALTELKNNTSNWEMGR*PQQVRA
Trigger: AGCACGGACTTGCTGCGGGCACCTGCCCATTTCCCA...GTTCGATGTATTATTTTTAAGCTCCGTGAGTGCGTGGGTCAGTGTCTGCATGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR GCA 90 bp CACTCACGGAGCTTAAAAATAATACATCGAACCACACGGATATCATCCCCTCCTACACCCAGGAGCCCGTaGCTGCAACAGAGCCGCTTT +
Preference number: 4 (lower is better)
Translates to: HSRSLKIIHRTTRISSPPTPRSP*LQQSRF
Trigger: AAAGCGGCTCTGTTGCAGGCACGGGCTCCTGGGTGT...AGGAGGGGATGATATCCGTGTGGTTCGATGTATTATTTTTAAGCTCCGTGAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp TTCATGCAGACACTGACCCACGCACTCACGGAGCTTAAAAATAATACATCGAACTTGTGGGGGTCCAGGTaGATGCGCACAGCAGTGGAC +
Preference number: 4 (lower is better)
Translates to: FMQTLTHALTELKNNTSNLWGSR*MRTAVD
Trigger: GTCCACTGCTGTGCGCATCCACCTGGACCCCCACAA...GTTCGATGTATTATTTTTAAGCTCCGTGAGTGCGTGGGTCAGTGTCTGCATGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp CACTCACGGAGCTTAAAAATAATACATCGAACCACACGGATATCATCCCCTCCTGTGAGCATGTTAGAGTaGGCACGTCGCGGCATCCGC +
Preference number: 4 (lower is better)
Translates to: HSRSLKIIHRTTRISSPPVSMLE*ARRGIR
Trigger: GCGGATGCCGCGACGTGCCCACTCTAACATGCTCAC...AGGAGGGGATGATATCCGTGTGGTTCGATGTATTATTTTTAAGCTCCGTGAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp CACTCACGGAGCTTAAAAATAATACATCGAACCACACGGATATCATCCCCTCCTCCTCCTGCGAACCAGTaGTCTCTACGCCTTCGGCCT +
Preference number: 4 (lower is better)
Translates to: HSRSLKIIHRTTRISSPPPPANQ*SLRLRP
Trigger: AGGCCGAAGGCGTAGAGACCACTGGTTCGCAGGAGG...AGGAGGGGATGATATCCGTGTGGTTCGATGTATTATTTTTAAGCTCCGTGAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR TCA 90 bp TTCATGCAGACACTGACCCACGCACTCACGGAGCTTAAAAATAATACATCGAACAGGCCACACTGCTTGTaGGGCCAGCCATGGAGAAGA +
Preference number: 4 (lower is better)
Translates to: FMQTLTHALTELKNNTSNRPHCL*GQPWRR
Trigger: TCTTCTCCATGGCTGGCCTCACAAGCAGTGTGGCCT...GTTCGATGTATTATTTTTAAGCTCCGTGAGTGCGTGGGTCAGTGTCTGCATGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR TCA 90 bp CAGACACTGACCCACGCACTCACGGAGCTTAAAAATAATACATCGAACCACACGTGGCATCAAACTCGGTaGAAAAGTGCGTGGCGAGGT +
Preference number: 4 (lower is better)
Translates to: QTLTHALTELKNNTSNHTWHQTR*KSAWRG
Trigger: ACCTCGCCACGCACTTTTTCACCGAGTTTGATGCCA...CGTGTGGTTCGATGTATTATTTTTAAGCTCCGTGAGTGCGTGGGTCAGTGTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR TCA 90 bp TTCATGCAGACACTGACCCACGCACTCACGGAGCTTAAAAATAATACATCGAACAAGCGTGGTCGAAGGTaGTGGAAGTCTCGGGAACCG +
Preference number: 4 (lower is better)
Translates to: FMQTLTHALTELKNNTSNKRGRR*WKSREP
Trigger: CGGTTCCCGAGACTTCCATCACCTTCGACCACGCTT...GTTCGATGTATTATTTTTAAGCTCCGTGAGTGCGTGGGTCAGTGTCTGCATGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR TCA 90 bp CAGACACTGACCCACGCACTCACGGAGCTTAAAAATAATACATCGAACCACACGAGCAGTTGGCCAGCTTaGAGGCTGACTTGCACATCT +
Preference number: 4 (lower is better)
Translates to: QTLTHALTELKNNTSNHTSSWPA*RLTCTS
Trigger: AGATGTGCAAGTCAGCCTTCAAGCTGGCCAACTGCT...CGTGTGGTTCGATGTATTATTTTTAAGCTCCGTGAGTGCGTGGGTCAGTGTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR GCA 90 bp CACTCACGGAGCTTAAAAATAATACATCGAACCACACGGATATCATCCCCTCCTGCAGGCTTGTGGTCATaGATGAGGCCCAGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: HSRSLKIIHRTTRISSPPAGLWS*MRPSSV
Trigger: CACAGAGCTGGGCCTCATGCATGACCACAAGCCTGC...AGGAGGGGATGATATCCGTGTGGTTCGATGTATTATTTTTAAGCTCCGTGAGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377264.8
CDS-3UTR GCA 90 bp CAGACACTGACCCACGCACTCACGGAGCTTAAAAATAATACATCGAACCACACGTGCTGGTTCAGGTCCTaGTCAATCAGCCACAGGTCT +
Preference number: 4 (lower is better)
Translates to: QTLTHALTELKNNTSNHTCWFRS*SISHRS
Trigger: AGACCTGTGGCTGATTGAGCAGGACCTGAACCAGCA...CGTGTGGTTCGATGTATTATTTTTAAGCTCCGTGAGTGCGTGGGTCAGTGTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR GCA 90 bp CAGACACTGACCCACGCACTCACGGAGCTTAAAAATAATACATCGAACCACACGGGTGCAGATCGCCTGTaGTCATTACGTACTGGAGCA +
Preference number: 4 (lower is better)
Translates to: QTLTHALTELKNNTSNHTGADRL*SLRTGA
Trigger: TGCTCCAGTACGTAATGAGCACAGGCGATCTGCACC...CGTGTGGTTCGATGTATTATTTTTAAGCTCCGTGAGTGCGTGGGTCAGTGTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp CACTCACGGAGCTTAAAAATAATACATCGAACCACACGGATATCATCCCCTCCTCCTGCCTGCAGCTGCTaGTTCAGGTCCTGCTCAATC +
Preference number: 4 (lower is better)
Translates to: HSRSLKIIHRTTRISSPPPACSC*FRSCSI
Trigger: GATTGAGCAGGACCTGAACCAGCAGCTGCAGGCAGG...AGGAGGGGATGATATCCGTGTGGTTCGATGTATTATTTTTAAGCTCCGTGAGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp TTCATGCAGACACTGACCCACGCACTCACGGAGCTTAAAAATAATACATCGAACCAAAAGCCTCCGTCCTaGGAGAAGGCAGCAGTGTGG +
Preference number: 4 (lower is better)
Translates to: FMQTLTHALTELKNNTSNQKPPS*EKAAVW
Trigger: CCACACTGCTGCCTTCTCCCAGGACGGAGGCTTTTG...GTTCGATGTATTATTTTTAAGCTCCGTGAGTGCGTGGGTCAGTGTCTGCATGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp CAGACACTGACCCACGCACTCACGGAGCTTAAAAATAATACATCGAACCACACGACACAGAAAGACACTTaGCTGAGTGGGATGGGGTCC +
Preference number: 4 (lower is better)
Translates to: QTLTHALTELKNNTSNHTTQKDT*LSGMGS
Trigger: GGACCCCATCCCACTCAGCCAAGTGTCTTTCTGTGT...CGTGTGGTTCGATGTATTATTTTTAAGCTCCGTGAGTGCGTGGGTCAGTGTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR GCA 90 bp CAGACACTGACCCACGCACTCACGGAGCTTAAAAATAATACATCGAACCACACGCGGGAGCATCAAGGATaGAGAACTCATCACTGTCCA +
Preference number: 4 (lower is better)
Translates to: QTLTHALTELKNNTSNHTREHQG*RTHHCP
Trigger: TGGACAGTGATGAGTTCTGCATCCTTGATGCTCCCG...CGTGTGGTTCGATGTATTATTTTTAAGCTCCGTGAGTGCGTGGGTCAGTGTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp CACTCACGGAGCTTAAAAATAATACATCGAACCACACGGATATCATCCCCTCCTAGGTGGTCCGGAAGATaGGGCAGACGTCTGAAGCAA +
Preference number: 4 (lower is better)
Translates to: HSRSLKIIHRTTRISSPPRWSGR*GRRLKQ
Trigger: TTGCTTCAGACGTCTGCCCCATCTTCCGGACCACCT...AGGAGGGGATGATATCCGTGTGGTTCGATGTATTATTTTTAAGCTCCGTGAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp CACTCACGGAGCTTAAAAATAATACATCGAACCACACGGATATCATCCCCTCCTAGGAACTTGTTGATCTaGGAGGAGGCGAGCCGGTCT +
Preference number: 4 (lower is better)
Translates to: HSRSLKIIHRTTRISSPPRNLLI*EEASRS
Trigger: AGACCGGCTCGCCTCCTCCCAGATCAACAAGTTCCT...AGGAGGGGATGATATCCGTGTGGTTCGATGTATTATTTTTAAGCTCCGTGAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp CACTCACGGAGCTTAAAAATAATACATCGAACCACACGGATATCATCCCCTCCTAAGAAGAGGGCATCCTaGTCCACATTGAGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: HSRSLKIIHRTTRISSPPKKRAS*STLSRR
Trigger: CCTGCGGCTCAATGTGGACCAGGATGCCCTCTTCTT...AGGAGGGGATGATATCCGTGTGGTTCGATGTATTATTTTTAAGCTCCGTGAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp CACTCACGGAGCTTAAAAATAATACATCGAACCACACGGATATCATCCCCTCCTAACCCTTGGAAGAGCTaGACAACCGAGTGCATGGGG +
Preference number: 4 (lower is better)
Translates to: HSRSLKIIHRTTRISSPPNPWKS*TTECMG
Trigger: CCCCATGCACTCGGTTGTCCAGCTCTTCCAAGGGTT...AGGAGGGGATGATATCCGTGTGGTTCGATGTATTATTTTTAAGCTCCGTGAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR TCA 90 bp CACTCACGGAGCTTAAAAATAATACATCGAACCACACGGATATCATCCCCTCCTCCAGGAAGGTCACTTTaGTCCTCCGAAGCACAGTCT +
Preference number: 4 (lower is better)
Translates to: HSRSLKIIHRTTRISSPPPGRSL*SSEAQS
Trigger: AGACTGTGCTTCGGAGGATCAAAGTGACCTTCCTGG...AGGAGGGGATGATATCCGTGTGGTTCGATGTATTATTTTTAAGCTCCGTGAGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377264.8
CDS-3UTR TCA 90 bp CACTCACGGAGCTTAAAAATAATACATCGAACCACACGGATATCATCCCCTCCTAGCAGTTGGCCAGCTTaGAGGCTGACTTGCACATCT +
Preference number: 4 (lower is better)
Translates to: HSRSLKIIHRTTRISSPPSSWPA*RLTCTS
Trigger: AGATGTGCAAGTCAGCCTTCAAGCTGGCCAACTGCT...AGGAGGGGATGATATCCGTGTGGTTCGATGTATTATTTTTAAGCTCCGTGAGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp CAGACACTGACCCACGCACTCACGGAGCTTAAAAATAATACATCGAACCACACGATGCCACGTCACAGATaGTCTGAGCTGTATCCAAGA +
Preference number: 4 (lower is better)
Translates to: QTLTHALTELKNNTSNHTMPRHR*SELYPR
Trigger: TCTTGGATACAGCTCAGACCATCTGTGACGTGGCAT...CGTGTGGTTCGATGTATTATTTTTAAGCTCCGTGAGTGCGTGGGTCAGTGTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR GCA 90 bp CACTCACGGAGCTTAAAAATAATACATCGAACCACACGGATATCATCCCCTCCTTCTCGTAGACCTCCTTaGTGGGCAGAAAGATGTGGA +
Preference number: 4 (lower is better)
Translates to: HSRSLKIIHRTTRISSPPSRRPP*WAERCG
Trigger: TCCACATCTTTCTGCCCAGCAAGGAGGTCTACGAGA...AGGAGGGGATGATATCCGTGTGGTTCGATGTATTATTTTTAAGCTCCGTGAGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CCA 90 bp CACTCACGGAGCTTAAAAATAATACATCGAACCACACGGATATCATCCCCTCCTCTTACCTTGCTCAGCTaGATCTCCATGAGGACATGG +
Preference number: 4 (lower is better)
Translates to: HSRSLKIIHRTTRISSPPLTLLS*ISMRTW
Trigger: CCATGTCCTCATGGAGATCCAGCTGAGCAAGGTAAG...AGGAGGGGATGATATCCGTGTGGTTCGATGTATTATTTTTAAGCTCCGTGAGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS CCA 90 bp CGGCCTGGCCCGCCCAGGGGTCCGGCTCAGGCCGCAGGTCGGCAATaGGGAAGCGCAGCCGCAGCGTGGCCCGGGGTGCAGAGAGCCGAA +
Preference number: 5 (lower is better)
Translates to: RPGPPRGPAQAAGRQ*GSAAAAWPGVQRAE
Trigger: TTCGGCTCTCTGCACCCCGGGCCACGCTGCGGCTGCGCTTCCCCATTGCCGACCTGCGGCCTGAGCCGGACCCCTGGGCGGGCCAGGCCG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS CCA 90 bp TGGGGCTCACTCAGCTCCAGCCGAAGCTGCTCAGCCCGCACGGCCTaGCCCGCCCAGGGGTCCGGCTCAGGCCGCAGGTCGGCAATGGGG +
Preference number: 5 (lower is better)
Translates to: WGSLSSSRSCSARTA*PAQGSGSGRRSAMG
Trigger: CCCCATTGCCGACCTGCGGCCTGAGCCGGACCCCTGGGCGGGCCAGGCCGTGCGGGCTGAGCAGCTTCGGCTGGAGCTGAGTGAGCCCCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS TCA 90 bp CGGACCCCTGCCAGCTGCAGCAGCTTGTGCAGGAAGGCAGGCGGCTaGTGCACGTCCACCGGCGGCGCCTGGCTTGGGTCCCGCACTGCC +
Preference number: 5 (lower is better)
Translates to: RTPASCSSLCRKAGG*CTSTGGAWLGSRTA
Trigger: GGCAGTGCGGGACCCAAGCCAGGCGCCGCCGGTGGACGTGCATCAGCCGCCTGCCTTCCTGCACAAGCTGCTGCAGCTGGCAGGGGTCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000461701.5
CDS TCA 90 bp TGCGCATGCCCCCGAGCAGGCTGGACGTGGCCTCCGTGGCCAGGATaGGCGGCTTCACCACAGTCGGGGGCAGCTGGCGGATCACGCCCC +
Preference number: 5 (lower is better)
Translates to: CACPRAGWTWPPWPG*AASPQSGAAGGSRP
Trigger: GGGGCGTGATCCGCCAGCTGCCCCCGACTGTGGTGAAGCCGCTCATCCTGGCCACGGAGGCCACGTCCAGCCTGCTCGGGGGCATGCGCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS CCA 90 bp GAGCGCCGGGGTCGGCTCTTAGGCACACGGCGCAGGATCTGTGTGTaGCGCAGATGGGCGCAGGGCCGAGCTGAGGCCTGGGAGCCCAGC +
Preference number: 5 (lower is better)
Translates to: ERRGRLLGTRRRICV*RRWAQGRAEAWEPS
Trigger: GCTGGGCTCCCAGGCCTCAGCTCGGCCCTGCGCCCATCTGCGCCACACACAGATCCTGCGCCGTGTGCCTAAGAGCCGACCCCGGCGCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS GCA 90 bp CGCAGCCGCAGCGTGGCCCGGGGTGCAGAGAGCCGAAATACCGTCTaGTGCTCCATCGCCGGCAGGGGCTCTGTCAGCAGGCCGGCTGGA +
Preference number: 5 (lower is better)
Translates to: RSRSVARGAESRNTV*CSIAGRGSVSRPAG
Trigger: TCCAGCCGGCCTGCTGACAGAGCCCCTGCCGGCGATGGAGCAGCAGACGGTATTTCGGCTCTCTGCACCCCGGGCCACGCTGCGGCTGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS GCA 90 bp CCGCAGGTCGGCAATGGGGAAGCGCAGCCGCAGCGTGGCCCGGGGTaGAGAGAGCCGAAATACCGTCTGCTGCTCCATCGCCGGCAGGGG +
Preference number: 5 (lower is better)
Translates to: PQVGNGEAQPQRGPG*REPKYRLLLHRRQG
Trigger: CCCCTGCCGGCGATGGAGCAGCAGACGGTATTTCGGCTCTCTGCACCCCGGGCCACGCTGCGGCTGCGCTTCCCCATTGCCGACCTGCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS CCA 90 bp CTCGCCCTGCCCTCACCTGGACCCCGGCGGGGCTGCAAGGTGAGCTaGAGGCCGGACACGCGCACTGTGCAGTGGTCGGTGAGCAGAGCA +
Preference number: 5 (lower is better)
Translates to: LALPSPGPRRGCKVS*RPDTRTVQWSVSRA
Trigger: TGCTCTGCTCACCGACCACTGCACAGTGCGCGTGTCCGGCCTCCAGCTCACCTTGCAGCCCCGCCGGGGTCCAGGTGAGGGCAGGGCGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000461701.5
ENST00000461955.1
CDS GCA 90 bp GCGAACCAGTGGTCTCTACGCCTTCGGCCTGCCCTTCCAGGGGGCTaGTGGGCTGGGCTCGAGTCTCGGGGCGAGCCTCAGCGGAGGTCT +
Preference number: 5 (lower is better)
Translates to: ANQWSLRLRPALPGG*WAGLESRGEPQRRS
Trigger: AGACCTCCGCTGAGGCTCGCCCCGAGACTCGAGCCCAGCCCAGCAGCCCCCTGGAAGGGCAGGCCGAAGGCGTAGAGACCACTGGTTCGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS CCA 90 bp CGGGGCTGCAAGGTGAGCTGGAGGCCGGACACGCGCACTGTGCAGTaGTCGGTGAGCAGAGCAGCCCAGGGCACGGCCACCTCGATGGAG +
Preference number: 5 (lower is better)
Translates to: RGCKVSWRPDTRTVQ*SVSRAAQGTATSME
Trigger: CTCCATCGAGGTGGCCGTGCCCTGGGCTGCTCTGCTCACCGACCACTGCACAGTGCGCGTGTCCGGCCTCCAGCTCACCTTGCAGCCCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377264.8
ENST00000421419.3
ENST00000461701.5
ENST00000461955.1
CDS CCA 90 bp CCGGCTCAGGCCGCAGGTCGGCAATGGGGAAGCGCAGCCGCAGCGTaGCCCGGGGTGCAGAGAGCCGAAATACCGTCTGCTGCTCCATCG +
Preference number: 5 (lower is better)
Translates to: PAQAAGRQWGSAAAA*PGVQRAEIPSAAPS
Trigger: CGATGGAGCAGCAGACGGTATTTCGGCTCTCTGCACCCCGGGCCACGCTGCGGCTGCGCTTCCCCATTGCCGACCTGCGGCCTGAGCCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS CCA 90 bp AACCAGTGGTCTCTACGCCTTCGGCCTGCCCTTCCAGGGGGCTGCTaGGCTGGGCTCGAGTCTCGGGGCGAGCCTCAGCGGAGGTCTCCC +
Preference number: 5 (lower is better)
Translates to: NQWSLRLRPALPGGC*AGLESRGEPQRRSP
Trigger: GGGAGACCTCCGCTGAGGCTCGCCCCGAGACTCGAGCCCAGCCCAGCAGCCCCCTGGAAGGGCAGGCCGAAGGCGTAGAGACCACTGGTT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS CCA 90 bp GAGCGCCACTTGAGGGCGTGGTCCTTGTGGGCGTCGGGGACAATCTaGTTGCGCATGCCCCCGAGCAGGCTGGACGTGGCCTCCGTGGCC +
Preference number: 5 (lower is better)
Translates to: ERHLRAWSLWASGTI*LRMPPSRLDVASVA
Trigger: GGCCACGGAGGCCACGTCCAGCCTGCTCGGGGGCATGCGCAACCAGATTGTCCCCGACGCCCACAAGGACCACGCCCTCAAGTGGCGCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS CCA 90 bp TGGTGGGCAGCACCCTCTGGGTGCCGGGCACCCCAGGCTCAGTCTTaGGCACTGTCCGAGCGCCACTTGAGGGCGTGGTCCTTGTGGGCG +
Preference number: 5 (lower is better)
Translates to: WWAAPSGCRAPQAQS*ALSERHLRAWSLWA
Trigger: CGCCCACAAGGACCACGCCCTCAAGTGGCGCTCGGACAGTGCCCAAGACTGAGCCTGGGGTGCCCGGCACCCAGAGGGTGCTGCCCACCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS GCA 90 bp GCCACAGACACTCCAGCACCTCCAGCTGCCCGAAGTGCACTTCCATaGTGGTTGTCCGCCGGCCCCGACTGCCCGTCCGCAGCTCCCAGG +
Preference number: 5 (lower is better)
Translates to: ATDTPAPPAARSALP*WLSAGPDCPSAAPR
Trigger: CCTGGGAGCTGCGGACGGGCAGTCGGGGCCGGCGGACAACCAGCATGGAAGTGCACTTCGGGCAGCTGGAGGTGCTGGAGTGTCTGTGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS CCA 90 bp GGTCGGCTCTTAGGCACACGGCGCAGGATCTGTGTGTGGCGCAGATaGGCGCAGGGCCGAGCTGAGGCCTGGGAGCCCAGCGTACCAGGA +
Preference number: 5 (lower is better)
Translates to: GRLLGTRRRICVWRR*AQGRAEAWEPSVPG
Trigger: TCCTGGTACGCTGGGCTCCCAGGCCTCAGCTCGGCCCTGCGCCCATCTGCGCCACACACAGATCCTGCGCCGTGTGCCTAAGAGCCGACC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS CCA 90 bp CGGCCAGCCGGTCCAGGGCCCCCAGCTCCACGTCCGCCTGGAAGTTaGCCAGGTCCAGGGCCAGTTCTGAGTGGCAATGGCAGGCAACTG +
Preference number: 5 (lower is better)
Translates to: RPAGPGPPAPRPPGS*PGPGPVLSGNGRQL
Trigger: CAGTTGCCTGCCATTGCCACTCAGAACTGGCCCTGGACCTGGCCAACTTCCAGGCGGACGTGGAGCTGGGGGCCCTGGACCGGCTGGCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS CCA 90 bp GTGGGGACTGGGGGACCAGGCCCACTGCTAAGCTCTGACCGGAACTaGGGCTCACTCAGCTCCAGCCGAAGCTGCTCAGCCCGCACGGCC +
Preference number: 5 (lower is better)
Translates to: VGTGGPGPLLSSDRN*GSLSSSRSCSARTA
Trigger: GGCCGTGCGGGCTGAGCAGCTTCGGCTGGAGCTGAGTGAGCCCCAGTTCCGGTCAGAGCTTAGCAGTGGGCCTGGTCCCCCAGTCCCCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS TCA 90 bp TCTGGGAGGAGGCGAGCCGGTCTCGGACCTCCAGCTCCTGCACGATaGACACCTGACGGGACAGCGGTCGCTCCTCCAGCTCCTGGCTGG +
Preference number: 5 (lower is better)
Translates to: SGRRRAGLGPPAPAR*TPDGTAVAPPAPGW
Trigger: CCAGCCAGGAGCTGGAGGAGCGACCGCTGTCCCGTCAGGTGTTCATCGTGCAGGAGCTGGAGGTCCGAGACCGGCTCGCCTCCTCCCAGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS GCA 90 bp CGGCTGATGCACGTCCACCGGCGGCGCCTGGCTTGGGTCCCGCACTaGCTCATCACAGTACTCCAGTCTCTGCACACGGACCTCGACGGC +
Preference number: 5 (lower is better)
Translates to: RLMHVHRRRLAWVPH*LITVLQSLHTDLDG
Trigger: GCCGTCGAGGTCCGTGTGCAGAGACTGGAGTACTGTGATGAGGCAGTGCGGGACCCAAGCCAGGCGCCGCCGGTGGACGTGCATCAGCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377264.8
CDS TCA 90 bp ACGGCGCAGGATCTGTGTGTGGCGCAGATGGGCGCAGGGCCGAGCTaGGGCCTGGGAGCCCAGCGTACCAGGAAAGGTCAGGATCTCCGT +
Preference number: 5 (lower is better)
Translates to: TAQDLCVAQMGAGPS*GLGAQRTRKGQDLR
Trigger: ACGGAGATCCTGACCTTTCCTGGTACGCTGGGCTCCCAGGCCTCAGCTCGGCCCTGCGCCCATCTGCGCCACACACAGATCCTGCGCCGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS TCA 90 bp AGGGAGCCTAGCCTGCAGAGCTGCCCCATCACACCTAGGCCGTCCTaGACCACCATGTCCAGCCCGGAGGCTCAGGCCAGCCCTTGCTCC +
Preference number: 5 (lower is better)
Translates to: REPSLQSCPITPRPS*TTMSSPEAQASPCS
Trigger: GGAGCAAGGGCTGGCCTGAGCCTCCGGGCTGGACATGGTGGTTCAGGACGGCCTAGGTGTGATGGGGCAGCTCTGCAGGCTAGGCTCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461701.5
CDS GCA 90 bp CGGCTGATGCACGTCCACCGGCGGCGCCTGGCTTGGGTCCCGCACTaGCTCATCACAGTACTCCAGTCTGGAGAGTGTAGGGTCAGCCCG +
Preference number: 5 (lower is better)
Translates to: RLMHVHRRRLAWVPH*LITVLQSGECRVSP
Trigger: CGGGCTGACCCTACACTCTCCAGACTGGAGTACTGTGATGAGGCAGTGCGGGACCCAAGCCAGGCGCCGCCGGTGGACGTGCATCAGCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461701.5
CDS CCA 90 bp CAGGAAGGCAGGCGGCTGATGCACGTCCACCGGCGGCGCCTGGCTTaGGTCCCGCACTGCCTCATCACAGTACTCCAGTCTCTGCACACG +
Preference number: 5 (lower is better)
Translates to: QEGRRLMHVHRRRLA*VPHCLITVLQSLHT
Trigger: CGTGTGCAGAGACTGGAGTACTGTGATGAGGCAGTGCGGGACCCAAGCCAGGCGCCGCCGGTGGACGTGCATCAGCCGCCTGCCTTCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377264.8
CDS CCA 90 bp ACAGACACTCCAGCACCTCCAGCTGCCCGAAGTGCACTTCCATGCTaGTTGTCCGCCGGCCCCGACTGCCCGTCCGCAGCTCCCAGGACA +
Preference number: 5 (lower is better)
Translates to: TDTPAPPAARSALPC*LSAGPDCPSAAPRT
Trigger: TGTCCTGGGAGCTGCGGACGGGCAGTCGGGGCCGGCGGACAACCAGCATGGAAGTGCACTTCGGGCAGCTGGAGGTGCTGGAGTGTCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS CCA 90 bp TCCGCCTGGAAGTTGGCCAGGTCCAGGGCCAGTTCTGAGTGGCAATaGCAGGCAACTGAGCGCCGGGGTCGGCTCTTAGGCACACGGCGC +
Preference number: 5 (lower is better)
Translates to: SAWKLARSRASSEWQ*QATERRGRLLGTRR
Trigger: GCGCCGTGTGCCTAAGAGCCGACCCCGGCGCTCAGTTGCCTGCCATTGCCACTCAGAACTGGCCCTGGACCTGGCCAACTTCCAGGCGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS CCA 90 bp GGGCCAGCTGAGCCGGGGGAGCGAAACTGGGAAGGTCCAGGTGACTaGGCAGCGGGTAGTCATCCACGGCCGCTCGGTGGTAGAGTGTTG +
Preference number: 5 (lower is better)
Translates to: GPAEPGERNWEGPGD*AAGSHPRPLGGRVL
Trigger: CAACACTCTACCACCGAGCGGCCGTGGATGACTACCCGCTGCCCAGTCACCTGGACCTTCCCAGTTTCGCTCCCCCGGCTCAGCTGGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS CCA 90 bp AGGGAGACCTCACGTAGCACCACCCGAGTGCTGGGCACTGGGAAATaGGCAGGTGCCCGCAGCAAGTCCGTGCTGCCGATCGGCCGTGAG +
Preference number: 5 (lower is better)
Translates to: RETSRSTTRVLGTGK*AGARSKSVLPIGRE
Trigger: CTCACGGCCGATCGGCAGCACGGACTTGCTGCGGGCACCTGCCCATTTCCCAGTGCCCAGCACTCGGGTGGTGCTACGTGAGGTCTCCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS CCA 90 bp CAGTCTTGGGCACTGTCCGAGCGCCACTTGAGGGCGTGGTCCTTGTaGGCGTCGGGGACAATCTGGTTGCGCATGCCCCCGAGCAGGCTG +
Preference number: 5 (lower is better)
Translates to: QSWALSERHLRAWSL*ASGTIWLRMPPSRL
Trigger: CAGCCTGCTCGGGGGCATGCGCAACCAGATTGTCCCCGACGCCCACAAGGACCACGCCCTCAAGTGGCGCTCGGACAGTGCCCAAGACTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR CAA 90 bp TTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATCCCCTGAAGGGGCACTTCCATGCTGGTaGTCCGCCGGCCCCGACTGC +
Preference number: 5 (lower is better)
Translates to: LATGRLGRRPSQWPSPEGALPCW*SAGPDC
Trigger: GCAGTCGGGGCCGGCGGACAACCAGCATGGAAGTGC...CCCTTCAGGGGATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CAA 90 bp TGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATCCCCTGAAGGGCTCAGGCCCACCCAGGTaGGTAGTGGGGGCCACATGC +
Preference number: 5 (lower is better)
Translates to: WQRAGWEGVLHSGHPLKGSGPPR*VVGATC
Trigger: GCATGTGGCCCCCACTACCAACCTGGGTGGGCCTGA...GCCCTTCAGGGGATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS TCA 90 bp GCCAGGCCCTCGTGGTCTGTAAGGCTCACGGCGCTGAGCAGTTCCTaGAGTTGCTGGAGCTGCCTCGGGGTCAGGAGCAGGTGCAGGGAG +
Preference number: 5 (lower is better)
Translates to: ARPSWSVRLTALSSS*SCWSCLGVRSRCRE
Trigger: CTCCCTGCACCTGCTCCTGACCCCGAGGCAGCTCCAGCAACTTCAGGAACTGCTCAGCGCCGTGAGCCTTACAGACCACGAGGGCCTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS GCA 90 bp AGGGGCTCAGCCACTGCCCCTGCCTGCAGCTGCTGGTTCAGGTCCTaGTCAATCAGCCACAGGTCTTCGGCACCTAGCGGGCGGCTCTTG +
Preference number: 5 (lower is better)
Translates to: RGSATAPACSCWFRS*SISHRSSAPSGRLL
Trigger: CAAGAGCCGCCCGCTAGGTGCCGAAGACCTGTGGCTGATTGAGCAGGACCTGAACCAGCAGCTGCAGGCAGGGGCAGTGGCTGAGCCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS GCA 90 bp TGGGCCTGTATCACCTGGCCTCTGGACACCAGTCCGGGCTCACGATaGAGCCCACCTCCCCAACCCTACCACCACCGAGGCCCATCCAGA +
Preference number: 5 (lower is better)
Translates to: WACITWPLDTSPGSR*SPPPQPYHHRGPSR
Trigger: TCTGGATGGGCCTCGGTGGTGGTAGGGTTGGGGAGGTGGGCTGCATCGTGAGCCCGGACTGGTGTCCAGAGGCCAGGTGATACAGGCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461701.5
CDS CCA 90 bp CCGTGCTGCCGATCGGCCGTGAGAAGTAACCGTCCCTCACAACGATaGGGCCGGGATGCAGCTGTGTCACCACAGGCTCCCCATCTCGGG +
Preference number: 5 (lower is better)
Translates to: PCCRSAVRSNRPSQR*GRDAAVSPQAPHLG
Trigger: CCCGAGATGGGGAGCCTGTGGTGACACAGCTGCATCCCGGCCCCATCGTTGTGAGGGACGGTTACTTCTCACGGCCGATCGGCAGCACGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS CCA 90 bp TCTGAGCTGTATCCAAGATGCCCTCTCGCACTGTGTCGTAGGCCTTaGCCACACCCTCCCGCAGGTCGGCAGGCTGCTGGCCCCTGCGCA +
Preference number: 5 (lower is better)
Translates to: SELYPRCPLALCRRP*PHPPAGRQAAGPCA
Trigger: TGCGCAGGGGCCAGCAGCCTGCCGACCTGCGGGAGGGTGTGGCCAAGGCCTACGACACAGTGCGAGAGGGCATCTTGGATACAGCTCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS CCA 90 bp CAGGAAGGCAGGCGGCTGATGCACGTCCACCGGCGGCGCCTGGCTTaGGTCCCGCACTGCCTCATCACAGTACTCCAGTCTGGAGAGTGT +
Preference number: 5 (lower is better)
Translates to: QEGRRLMHVHRRRLA*VPHCLITVLQSGEC
Trigger: ACACTCTCCAGACTGGAGTACTGTGATGAGGCAGTGCGGGACCCAAGCCAGGCGCCGCCGGTGGACGTGCATCAGCCGCCTGCCTTCCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461701.5
CDS-3UTR CAA 90 bp GACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGCACTTCCATGCTGGTaGTCCGCCGGCCCCGACTGC +
Preference number: 5 (lower is better)
Translates to: DTWLSGMGSEGPKASVLGALPCW*SAGPDC
Trigger: GCAGTCGGGGCCGGCGGACAACCAGCATGGAAGTGC...TCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CAA 90 bp CCTCTCACAGCAGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCCGATGGGTAGATGGTaGGGGCCAGCTGAGCCGGGG +
Preference number: 5 (lower is better)
Translates to: PLTADWQRAGWEGVLHSGPMGRW*GPAEPG
Trigger: CCCCGGCTCAGCTGGCCCCAACCATCTACCCATCGG...GCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCTGCTGTGAGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CAA 90 bp CCTCTCACAGCAGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCTGAGAGGCCAGTTCTaGCCCTGTGGCCGGGGTGGG +
Preference number: 5 (lower is better)
Translates to: PLTADWQRAGWEGVLHSGLRGQF*PCGRGG
Trigger: CCCACCCCGGCCACAGGGCAAGAACTGGCCTCTCAG...GCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCTGCTGTGAGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CAA 90 bp CCCCCTCTCACAGCAGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTCTGAGAGGCCAGTTCTaGCCCTGTGGCCGGGGTGGG +
Preference number: 5 (lower is better)
Translates to: PPLTADWQRAGWEGVLHSLRGQF*PCGRGG
Trigger: CCCACCCCGGCCACAGGGCAAGAACTGGCCTCTCAG...ACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCTGCTGTGAGAGGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CAA 90 bp CCTCTCACAGCAGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCGAGTTCTGGGGCCGGTaGGGGCCAGAGCAGCGGGAA +
Preference number: 5 (lower is better)
Translates to: PLTADWQRAGWEGVLHSGEFWGR*GPEQRE
Trigger: TTCCCGCTGCTCTGGCCCCAACCGGCCCCAGAACTC...GCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCTGCTGTGAGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CAA 90 bp TGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGAAGGCCCTGGGACCACGGGGTaGATGCCGGCCACCAGACTA +
Preference number: 5 (lower is better)
Translates to: WLSGMGSEGPKASVLGEGPGTTG*MPATRL
Trigger: TAGTCTGGTGGCCGGCATCAACCCCGTGGTCCCAGG...GCCTTCTCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CAA 90 bp GGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGAAGGCAGCAGTGTGGTCGGGGACAATCTGGTaGCGCATGCCCCCGAGCAGG +
Preference number: 5 (lower is better)
Translates to: GWGPRVQKPPSWEKAAVWSGTIW*RMPPSR
Trigger: CCTGCTCGGGGGCATGCGCAACCAGATTGTCCCCGA...CCACACTGCTGCCTTCTCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS TCA 90 bp GAAATGGGCAGGTGCCCGCAGCAAGTCCGTGCTGCCGATCGGCCGTaGGAAGTAACCGTCCCTCACAACGATGGGGCCGGGATGCAGCTG +
Preference number: 5 (lower is better)
Translates to: EMGRCPQQVRAADRP*EVTVPHNDGAGMQL
Trigger: CAGCTGCATCCCGGCCCCATCGTTGTGAGGGACGGTTACTTCTCACGGCCGATCGGCAGCACGGACTTGCTGCGGGCACCTGCCCATTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS GCA 90 bp TCAGAGGGCTCCGGTAGCCCATCCCGCAGACACTCCTGGGCCAGCTaGAGGCTTGTGGTCATGCATGAGGCCCAGCTCTGTGAGTCGGCA +
Preference number: 5 (lower is better)
Translates to: SEGSGSPSRRHSWAS*RLVVMHEAQLCESA
Trigger: TGCCGACTCACAGAGCTGGGCCTCATGCATGACCACAAGCCTGCAGCTGGCCCAGGAGTGTCTGCGGGATGGGCTACCGGAGCCCTCTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000461701.5
CDS GCA 90 bp CATAGAGGTGCCAGACGAGGGAGACCTCACGTAGCACCACCCGAGTaGTGGGCACTGGGAAATGGGCAGGTGCCCGCAGCAAGTCCGTGC +
Preference number: 5 (lower is better)
Translates to: HRGARRGRPHVAPPE*WALGNGQVPAASPC
Trigger: GCACGGACTTGCTGCGGGCACCTGCCCATTTCCCAGTGCCCAGCACTCGGGTGGTGCTACGTGAGGTCTCCCTCGTCTGGCACCTCTATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS GCA 90 bp CCCATCTTCACACCAGTCCACCCCAGATCGGCCTGCCCTTACCTCTaGACACGGACCTCGACGGCCACACCACGTTCCCCATCACCCGGA +
Preference number: 5 (lower is better)
Translates to: PIFTPVHPRSACPYL*TRTSTATPRSPSPG
Trigger: TCCGGGTGATGGGGAACGTGGTGTGGCCGTCGAGGTCCGTGTGCAGAGGTAAGGGCAGGCCGATCTGGGGTGGACTGGTGTGAAGATGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461701.5
CDS CCA 90 bp TCCACGTCCGCCTGGAAGTTGGCCAGGTCCAGGGCCAGTTCTGAGTaGCAATGGCAGGCAACTGAGCGCCGGGGTCGGCTCTTAGGCACA +
Preference number: 5 (lower is better)
Translates to: STSAWKLARSRASSE*QWQATERRGRLLGT
Trigger: TGTGCCTAAGAGCCGACCCCGGCGCTCAGTTGCCTGCCATTGCCACTCAGAACTGGCCCTGGACCTGGCCAACTTCCAGGCGGACGTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS CCA 90 bp CCATCCAGATCCACCCTGCCTCTTCCCAGGAACCTAGGCTGCGGGTaGGGACCATCCAGCAGCCCCCACTCCCCATCTTCACACCAGTCC +
Preference number: 5 (lower is better)
Translates to: PSRSTLPLPRNLGCG*GPSSSPHSPSSHQS
Trigger: GGACTGGTGTGAAGATGGGGAGTGGGGGCTGCTGGATGGTCCCCACCCGCAGCCTAGGTTCCTGGGAAGAGGCAGGGTGGATCTGGATGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461701.5
CDS CCA 90 bp CTAACTTGGTTCTTGGGGCCTCGGCCACTCTGGGCCTGTATCACCTaGCCTCTGGACACCAGTCCGGGCTCACGATGCAGCCCACCTCCC +
Preference number: 5 (lower is better)
Translates to: LTWFLGPRPLWACIT*PLDTSPGSRCSPPP
Trigger: GGGAGGTGGGCTGCATCGTGAGCCCGGACTGGTGTCCAGAGGCCAGGTGATACAGGCCCAGAGTGGCCGAGGCCCCAAGAACCAAGTTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461701.5
CDS-3UTR CAA 90 bp TGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGAAGGCCCTAGCGGGCGGCTCTaGTTCAGCTTGTCAGCCAGG +
Preference number: 5 (lower is better)
Translates to: WLSGMGSEGPKASVLGEGPSGRL*FSLSAR
Trigger: CCTGGCTGACAAGCTGAACAAGAGCCGCCCGCTAGG...GCCTTCTCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CAA 90 bp CCCCCTCTCACAGCAGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTCCTGGGACCACGGGGTaGATGCCGGCCACCAGACTA +
Preference number: 5 (lower is better)
Translates to: PPLTADWQRAGWEGVLHSPGTTG*MPATRL
Trigger: TAGTCTGGTGGCCGGCATCAACCCCGTGGTCCCAGG...ACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCTGCTGTGAGAGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CAA 90 bp GGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGAAGGCAGCAGTGTGGCTCGGAGCAGTTGAGTaGGGCCAGGCCGATGAGGAG +
Preference number: 5 (lower is better)
Translates to: GWGPRVQKPPSWEKAAVWLGAVE*GQADEE
Trigger: CTCCTCATCGGCCTGGCCCAACTCAACTGCTCCGAG...CCACACTGCTGCCTTCTCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CAA 90 bp CCTCTCACAGCAGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCCGGGCAGCTGGTTCTaGCGGATGTCCTGCAGCCAC +
Preference number: 5 (lower is better)
Translates to: PLTADWQRAGWEGVLHSGPGSWF*RMSCSH
Trigger: GTGGCTGCAGGACATCCGCAAGAACCAGCTGCCCGG...GCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCTGCTGTGAGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR CAA 90 bp GACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGATCGGGGACAATCTGGTaGCGCATGCCCCCGAGCAGG +
Preference number: 5 (lower is better)
Translates to: DTWLSGMGSEGPKASVLGSGTIW*RMPPSR
Trigger: CCTGCTCGGGGGCATGCGCAACCAGATTGTCCCCGA...TCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR CAA 90 bp TGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGAAGGCTTGAGGGCGTGGTCCTaGTGGGCGTCGGGGACAATC +
Preference number: 5 (lower is better)
Translates to: WLSGMGSEGPKASVLGEGLRAWS*WASGTI
Trigger: GATTGTCCCCGACGCCCACAAGGACCACGCCCTCAA...GCCTTCTCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR CAA 90 bp CCCCCTCTCACAGCAGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTCTGTCCGAGCGCCACTaGAGGGCGTGGTCCTTGTGG +
Preference number: 5 (lower is better)
Translates to: PPLTADWQRAGWEGVLHSLSERH*RAWSLW
Trigger: CCACAAGGACCACGCCCTCAAGTGGCGCTCGGACAG...ACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCTGCTGTGAGAGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR CAA 90 bp TTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGAAGGACCCCAGGCTCAGTCTaGGGCACTGTCCGAGCGCCA +
Preference number: 5 (lower is better)
Translates to: LAEWDGVRGSKSLRPGRRTPGSV*GTVRAP
Trigger: TGGCGCTCGGACAGTGCCCAAGACTGAGCCTGGGGT...CCTTCTCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR CAA 90 bp TTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATCCCCTGAAGGGCCCTCTCACAGCAGATaGGCAACGGGCAGGCTGGGA +
Preference number: 5 (lower is better)
Translates to: LATGRLGRRPSQWPSPEGPSHSR*ATGRLG
Trigger: TCCCAGCCTGCCCGTTGCCAATCTGCTGTGAGAGGG...CCCTTCAGGGGATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS GCA 90 bp GATGTGGACACTGGGCAGGATCACTTCCAGGCTGCAGCGGGACAGTaGCAGGGTCCGGCTCTGGAACGTCCTCATCTCCTCAGGGTCTCC +
Preference number: 5 (lower is better)
Translates to: DVDTGQDHFQAAAGQ*QGPALERPHLLRVS
Trigger: GGAGACCCTGAGGAGATGAGGACGTTCCAGAGCCGGACCCTGGCACTGTCCCGCTGCAGCCTGGAAGTGATCCTGCCCAGTGTCCACATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS GCA 90 bp GAAGCCCGAGGGCTGGGCGGCGGGGTCGGGGGTGGGAAGCAGATCTaGAGGCTCCCACATGAGCAGGTCGTTGTTGATCCTGTTGTAGAT +
Preference number: 5 (lower is better)
Translates to: EARGLGGGVGGGKQI*RLPHEQVVVDPVVD
Trigger: ATCTACAACAGGATCAACAACGACCTGCTCATGTGGGAGCCTGCAGATCTGCTTCCCACCCCCGACCCCGCCGCCCAGCCCTCGGGCTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CAA 90 bp TTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATCCCCTGAAGGGAGGGCAACGCTGCCCTaGTACAGATCGAGGCTGAGC +
Preference number: 5 (lower is better)
Translates to: LATGRLGRRPSQWPSPEGRATLP*YRSRLS
Trigger: GCTCAGCCTCGATCTGTACAAGGGCAGCGTTGCCCT...CCCTTCAGGGGATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000421419.3
CDS-3UTR CAA 90 bp AGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATCCCCTGAAGGGCCAGCTGCAGGCTaGTGGTCATGCATGAGGCCC +
Preference number: 5 (lower is better)
Translates to: RLATGRLGRRPSQWPSPEGPAAG*WSCMRP
Trigger: GGGCCTCATGCATGACCACAAGCCTGCAGCTGGCCC...TTCAGGGGATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377264.8
CDS-3UTR CAA 90 bp CCCCCAGACACAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAGCCAGCTGCAGCAGCTaGTGCAGGAAGGCAGGCGGC +
Preference number: 5 (lower is better)
Translates to: PPDTERHLAEWDGVRGSKASCSS*CRKAGG
Trigger: GCCGCCTGCCTTCCTGCACAAGCTGCTGCAGCTGGC...TTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTGTGTCTGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CAA 90 bp GACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGACGGCTCTTGTTCAGCTaGTCAGCCAGGCCCTCGTGG +
Preference number: 5 (lower is better)
Translates to: DTWLSGMGSEGPKASVLGRLLFS*SARPSW
Trigger: CCACGAGGGCCTGGCTGACAAGCTGAACAAGAGCCG...TCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CAA 90 bp GGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGAAGGCAGCAGTGTGGAGGTTGAGAAGGGGGTaGGTAAGGGGGTCTGGGCTG +
Preference number: 5 (lower is better)
Translates to: GWGPRVQKPPSWEKAAVWRLRRG*VRGSGL
Trigger: CAGCCCAGACCCCCTTACCAACCCCCTTCTCAACCT...CCACACTGCTGCCTTCTCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CAA 90 bp GGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGAAGGCAGCAGTGTGGTGGCGCAAGGTGGCTTaGTGCAACCGCAGTGTCACC +
Preference number: 5 (lower is better)
Translates to: GWGPRVQKPPSWEKAAVWWRKVA*CNRSVT
Trigger: GGTGACACTGCGGTTGCACAAAGCCACCTTGCGCCA...CCACACTGCTGCCTTCTCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CAA 90 bp CTCACAGCAGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATCCGGGCAGCTGGTTCTaGCGGATGTCCTGCAGCCAC +
Preference number: 5 (lower is better)
Translates to: LTADWQRAGWEGVLHSGHPGSWF*RMSCSH
Trigger: GTGGCTGCAGGACATCCGCAAGAACCAGCTGCCCGG...ATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCTGCTGTGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR CAA 90 bp CCCCCTCTCACAGCAGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTTTGAGGGCGTGGTCCTaGTGGGCGTCGGGGACAATC +
Preference number: 5 (lower is better)
Translates to: PPLTADWQRAGWEGVLHSLRAWS*WASGTI
Trigger: GATTGTCCCCGACGCCCACAAGGACCACGCCCTCAA...ACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCTGCTGTGAGAGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR CAA 90 bp TGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGAAGGCAGCAGTGTCCCTCTCACAGCAGATaGGCAACGGGCAGGCTGGGA +
Preference number: 5 (lower is better)
Translates to: WDGVRGSKSLRPGRRQQCPSHSR*ATGRLG
Trigger: TCCCAGCCTGCCCGTTGCCAATCTGCTGTGAGAGGG...ACACTGCTGCCTTCTCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS TCA 90 bp CACGTCGCGGCATCCGCTCACTCGTGTGTAGGTACAGGAACTTGTTaGTCTGGGAGGAGGCGAGCCGGTCTCGGACCTCCAGCTCCTGCA +
Preference number: 5 (lower is better)
Translates to: HVAASAHSCVGTGTC*SGRRRAGLGPPAPA
Trigger: TGCAGGAGCTGGAGGTCCGAGACCGGCTCGCCTCCTCCCAGATCAACAAGTTCCTGTACCTACACACGAGTGAGCGGATGCCGCGACGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS CCA 90 bp CAGTCACCACTACCTGGGGCAGGAAGTACTTGCGCCCAGTGCTCTTaGGGTCCAGGGCTTTGGAGACACGCAGGCAAGGGACAGGTGGCT +
Preference number: 5 (lower is better)
Translates to: QSPLPGAGSTCAQCS*GPGLWRHAGKGQVA
Trigger: AGCCACCTGTCCCTTGCCTGCGTGTCTCCAAAGCCCTGGACCCCAAGAGCACTGGGCGCAAGTACTTCCTGCCCCAGGTAGTGGTGACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS CCA 90 bp AGGATCACTTCCAGGCTGCAGCGGGACAGTGCCAGGGTCCGGCTCTaGAACGTCCTCATCTCCTCAGGGTCTCCAGGGATCACCATCTCC +
Preference number: 5 (lower is better)
Translates to: RITSRLQRDSARVRL*NVLISSGSPGITIS
Trigger: GGAGATGGTGATCCCTGGAGACCCTGAGGAGATGAGGACGTTCCAGAGCCGGACCCTGGCACTGTCCCGCTGCAGCCTGGAAGTGATCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS CCA 90 bp CGCGGCATCCGCTCACTCGTGTGTAGGTACAGGAACTTGTTGATCTaGGAGGAGGCGAGCCGGTCTCGGACCTCCAGCTCCTGCACGATG +
Preference number: 5 (lower is better)
Translates to: RGIRSLVCRYRNLLI*EEASRSRTSSSCTM
Trigger: CATCGTGCAGGAGCTGGAGGTCCGAGACCGGCTCGCCTCCTCCCAGATCAACAAGTTCCTGTACCTACACACGAGTGAGCGGATGCCGCG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CAA 90 bp ACAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCCGCCACCTCCAACTaGGGGCCAGGGAAGGCCTCA +
Preference number: 5 (lower is better)
Translates to: TERHLAEWDGVRGSKSLRPATSN*GPGKAS
Trigger: TGAGGCCTTCCCTGGCCCCAAGTTGGAGGTGGCGGG...ACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CAA 90 bp GACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGAGCAGTTCCTGAAGTaGCTGGAGCTGCCTCGGGGT +
Preference number: 5 (lower is better)
Translates to: DTWLSGMGSEGPKASVLGEQFLK*LELPRG
Trigger: ACCCCGAGGCAGCTCCAGCAACTTCAGGAACTGCTC...TCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CAA 90 bp TGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGAAGGCAGCAGTGTAGGTTGAGAAGGGGGTaGGTAAGGGGGTCTGGGCTG +
Preference number: 5 (lower is better)
Translates to: WDGVRGSKSLRPGRRQQCRLRRG*VRGSGL
Trigger: CAGCCCAGACCCCCTTACCAACCCCCTTCTCAACCT...ACACTGCTGCCTTCTCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CAA 90 bp AGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATCCCCTGAATTGCGCCCAGTGCTCTaGGGGTCCAGGGCTTTGGAG +
Preference number: 5 (lower is better)
Translates to: RLATGRLGRRPSQWPSPELRPVL*GSRALE
Trigger: CTCCAAAGCCCTGGACCCCAAGAGCACTGGGCGCAA...TTCAGGGGATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CAA 90 bp CTCACAGCAGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATTGGGGCAGGAAGTACTaGCGCCCAGTGCTCTTGGGG +
Preference number: 5 (lower is better)
Translates to: LTADWQRAGWEGVLHSGHWGRKY*RPVLLG
Trigger: CCCCAAGAGCACTGGGCGCAAGTACTTCCTGCCCCA...ATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCTGCTGTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CAA 90 bp AGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATCCCCTGAAGCATCCTGGTCCACATaGAGCCGCAGGGGCATCAGC +
Preference number: 5 (lower is better)
Translates to: RLATGRLGRRPSQWPSPEASWST*SRRGIS
Trigger: GCTGATGCCCCTGCGGCTCAATGTGGACCAGGATGC...TTCAGGGGATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CAA 90 bp CCTCTCACAGCAGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCTTCAGCTCGGAGCAGTaGAGTTGGGCCAGGCCGATG +
Preference number: 5 (lower is better)
Translates to: PLTADWQRAGWEGVLHSGFSSEQ*SWARPM
Trigger: CATCGGCCTGGCCCAACTCAACTGCTCCGAGCTGAA...GCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCTGCTGTGAGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CAA 90 bp TGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGAAGGCAGCAGTGTCAGGTCCCGGAACCCTaGGAAGAGCTGGACAACCGA +
Preference number: 5 (lower is better)
Translates to: WDGVRGSKSLRPGRRQQCQVPEP*EELDNR
Trigger: TCGGTTGTCCAGCTCTTCCAAGGGTTCCGGGACCTG...ACACTGCTGCCTTCTCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR CAA 90 bp AGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATCCCCTGAAGCCTGTACCAACCGGTaGCTGAGTTCCAGGGCGGCA +
Preference number: 5 (lower is better)
Translates to: RLATGRLGRRPSQWPSPEACTNR*LSSRAA
Trigger: TGCCGCCCTGGAACTCAGCAACCGGTTGGTACAGGC...TTCAGGGGATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR CAA 90 bp CTCACAGCAGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATGCCTGTACCAACCGGTaGCTGAGTTCCAGGGCGGCA +
Preference number: 5 (lower is better)
Translates to: LTADWQRAGWEGVLHSGHACTNR*LSSRAA
Trigger: TGCCGCCCTGGAACTCAGCAACCGGTTGGTACAGGC...ATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCTGCTGTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR CAA 90 bp CCCCCAGACACAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAACTGTCCGAGCGCCACTaGAGGGCGTGGTCCTTGTGG +
Preference number: 5 (lower is better)
Translates to: PPDTERHLAEWDGVRGSKLSERH*RAWSLW
Trigger: CCACAAGGACCACGCCCTCAAGTGGCGCTCGGACAG...TTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTGTGTCTGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR CAA 90 bp CCCCCAGACACAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAACCCCAGGCTCAGTCTaGGGCACTGTCCGAGCGCCA +
Preference number: 5 (lower is better)
Translates to: PPDTERHLAEWDGVRGSKTPGSV*GTVRAP
Trigger: TGGCGCTCGGACAGTGCCCAAGACTGAGCCTGGGGT...TTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTGTGTCTGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS TCA 90 bp GACAGAAGTAGCCAAGTCCTGGCTGGCCACAGTACTGGGAGACGCTaGAGAGGGTACCGTGCTCCATGTCCAGCACCAGCTCCCCGTGCA +
Preference number: 5 (lower is better)
Translates to: DRSSQVLAGHSTGRR*RGYRAPCPAPAPRA
Trigger: TGCACGGGGAGCTGGTGCTGGACATGGAGCACGGTACCCTCTTCAGCGTCTCCCAGTACTGTGGCCAGCCAGGACTTGGCTACTTCTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS GCA 90 bp ACACGGACCTCGACGGCCACACCACGTTCCCCATCACCCGGAGAGTaGTCCACCCTCACGACAGTGTCCAGGAAGGTCACTTTGATCCTC +
Preference number: 5 (lower is better)
Translates to: TRTSTATPRSPSPGE*STLTTVSRKVTLIL
Trigger: GAGGATCAAAGTGACCTTCCTGGACACTGTCGTGAGGGTGGAGCACTCTCCGGGTGATGGGGAACGTGGTGTGGCCGTCGAGGTCCGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000461701.5
CDS GCA 90 bp GGTTCACAGTCACCACTACCTGGGGCAGGAAGTACTTGCGCCCAGTaGTCTTGGGGTCCAGGGCTTTGGAGACACGCAGGCAAGGGACAG +
Preference number: 5 (lower is better)
Translates to: GSQSPLPGAGSTCAQ*SWGPGLWRHAGKGQ
Trigger: CTGTCCCTTGCCTGCGTGTCTCCAAAGCCCTGGACCCCAAGAGCACTGGGCGCAAGTACTTCCTGCCCCAGGTAGTGGTGACTGTGAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS CCA 90 bp GGGGCAGGAAGTACTTGCGCCCAGTGCTCTTGGGGTCCAGGGCTTTaGAGACACGCAGGCAAGGGACAGGTGGCTTCCCTCCATCTTCAT +
Preference number: 5 (lower is better)
Translates to: GAGSTCAQCSWGPGL*RHAGKGQVASLHLH
Trigger: ATGAAGATGGAGGGAAGCCACCTGTCCCTTGCCTGCGTGTCTCCAAAGCCCTGGACCCCAAGAGCACTGGGCGCAAGTACTTCCTGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS CCA 90 bp GCAGGGCACAGGAGTCGGCACAGCTGTGCACGTGTACCACATTGTTaGAGCAGCGCAGCTCGAATAGTGGCTGGCTCAGTTTGCCCTCGG +
Preference number: 5 (lower is better)
Translates to: AGHRSRHSCARVPHC*SSAARIVAGSVCPR
Trigger: CCGAGGGCAAACTGAGCCAGCCACTATTCGAGCTGCGCTGCTCCAACAATGTGGTACACGTGCACAGCTGTGCCGACTCCTGTGCCCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS CCA 90 bp TGCCTGCAACAGAGCCGCTTTAGCTTCAGCTCGGAGCAGTTGAGTTaGGCCAGGCCGATGAGGAGGCCAGCAAAAGTGCCCACCTGGTCC +
Preference number: 5 (lower is better)
Translates to: CLQQSRFSFSSEQLS*ARPMRRPAKVPTWS
Trigger: GGACCAGGTGGGCACTTTTGCTGGCCTCCTCATCGGCCTGGCCCAACTCAACTGCTCCGAGCTGAAGCTAAAGCGGCTCTGTTGCAGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000472525.1
CDS CCA 90 bp CCGTCAGCCCCTTCTGCTCATGGCCCCGCGATGCCACGTCACAGATaGTCTGAGCTGTATCCAAGATGCCCTCTCGCACTGTGTCGTAGG +
Preference number: 5 (lower is better)
Translates to: PSAPSAHGPAMPRHR*SELYPRCPLALCRR
Trigger: CCTACGACACAGTGCGAGAGGGCATCTTGGATACAGCTCAGACCATCTGTGACGTGGCATCGCGGGGCCATGAGCAGAAGGGGCTGACGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS CCA 90 bp CAGACTTCCTGGACTCGGGCCTGGCTCCTCACCCAGATTTCCAGGTaGATGTCTCGCAGGGCAACGCTGCCCTTGTACAGATCGAGGCTG +
Preference number: 5 (lower is better)
Translates to: QTSWTRAWLLTQISR*MSRRATLPLYRSRL
Trigger: CAGCCTCGATCTGTACAAGGGCAGCGTTGCCCTGCGAGACATCCACCTGGAAATCTGGGTGAGGAGCCAGGCCCGAGTCCAGGAAGTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461701.5
ENST00000461955.1
CDS CCA 90 bp TCAGACCCTCAGCATCTAACTTGGTTCTTGGGGCCTCGGCCACTCTaGGCCTGTATCACCTGGCCTCTGGACACCAGTCCGGGCTCACGA +
Preference number: 5 (lower is better)
Translates to: SDPQHLTWFLGPRPL*ACITWPLDTSPGSR
Trigger: TCGTGAGCCCGGACTGGTGTCCAGAGGCCAGGTGATACAGGCCCAGAGTGGCCGAGGCCCCAAGAACCAAGTTAGATGCTGAGGGTCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461701.5
CDS-3UTR CAA 90 bp TGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATCCCCTGAAGGGCTCCAGGAAGGTCACTTaGATCCTCCGAAGCACAGTC +
Preference number: 5 (lower is better)
Translates to: WQRAGWEGVLHSGHPLKGSRKVT*ILRSTV
Trigger: GACTGTGCTTCGGAGGATCAAAGTGACCTTCCTGGA...GCCCTTCAGGGGATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377264.8
CDS-3UTR CAA 90 bp CAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCGGCTCTTGTTCAGCTaGTCAGCCAGGCCCTCGTGG +
Preference number: 5 (lower is better)
Translates to: QKDTWLSGMGSEGPKASVRLLFS*SARPSW
Trigger: CCACGAGGGCCTGGCTGACAAGCTGAACAAGAGCCG...GACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CAA 90 bp TGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGAAGGCAGCAGTGTGTCTCCACCTCACACTaGTCGGACAGGTACAAGGCG +
Preference number: 5 (lower is better)
Translates to: WDGVRGSKSLRPGRRQQCVSTSH*SDRYKA
Trigger: CGCCTTGTACCTGTCCGACAAGTGTGAGGTGGAGAC...ACACTGCTGCCTTCTCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CAA 90 bp CTCACAGCAGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATAGTGGCTGGCTCAGTTaGCCCTCGGTGCTCCCTTTC +
Preference number: 5 (lower is better)
Translates to: LTADWQRAGWEGVLHSGHSGWLS*PSVLPF
Trigger: GAAAGGGAGCACCGAGGGCAAACTGAGCCAGCCACT...ATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCTGCTGTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CAA 90 bp CAGACACAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCAGGCCCACCCAGGTaGGTAGTGGGGGCCACATGC +
Preference number: 5 (lower is better)
Translates to: QTQKDTWLSGMGSEGPKASGPPR*VVGATC
Trigger: GCATGTGGCCCCCACTACCAACCTGGGTGGGCCTGA...GGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTGTGTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CAA 90 bp AGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATCCCCTGAATTCAGCTCGGAGCAGTaGAGTTGGGCCAGGCCGATG +
Preference number: 5 (lower is better)
Translates to: RLATGRLGRRPSQWPSPEFSSEQ*SWARPM
Trigger: CATCGGCCTGGCCCAACTCAACTGCTCCGAGCTGAA...TTCAGGGGATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS TCA 90 bp AGTCTCGGGAACCGAAGGGCCCATCCTTGGTGGCATCAAACTCGGTaGAAAAGTGCGTGGCGAGGTCAGGTGGTCCGGAAGATGGGGCAG +
Preference number: 5 (lower is better)
Translates to: SLGNRRAHPWWHQTR*KSAWRGQVVRKMGQ
Trigger: CTGCCCCATCTTCCGGACCACCTGACCTCGCCACGCACTTTTTCACCGAGTTTGATGCCACCAAGGATGGGCCCTTCGGTTCCCGAGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS TCA 90 bp CGAACATGGCTACAGGGACAGGCCCTCTGGAAGCGTGGTCGAAGGTaGTGGAAGTCTCGGGAACCGAAGGGCCCATCCTTGGTGGCATCA +
Preference number: 5 (lower is better)
Translates to: RTWLQGQALWKRGRR*WKSREPKGPSLVAS
Trigger: TGATGCCACCAAGGATGGGCCCTTCGGTTCCCGAGACTTCCATCACCTTCGACCACGCTTCCAGAGGGCCTGTCCCTGTAGCCATGTTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS CCA 90 bp AGATGCTCTCGTAGACCTCCTTGCTGGGCAGAAAGATGTGGACACTaGGCAGGATCACTTCCAGGCTGCAGCGGGACAGTGCCAGGGTCC +
Preference number: 5 (lower is better)
Translates to: RCSRRPPCWAERCGH*AGSLPGCSGTVPGS
Trigger: GGACCCTGGCACTGTCCCGCTGCAGCCTGGAAGTGATCCTGCCCAGTGTCCACATCTTTCTGCCCAGCAAGGAGGTCTACGAGAGCATCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS CCA 90 bp CAGAACAGAAGGAAGATCAGGGACCCTGGAGAGAGGCTGGGGTGCTaGGGACTCACCCGTGCCTGCAACAGAGCCGCTTTAGCTTCAGCT +
Preference number: 5 (lower is better)
Translates to: QNRRKIRDPGERLGC*GLTRACNRAALASA
Trigger: AGCTGAAGCTAAAGCGGCTCTGTTGCAGGCACGGGTGAGTCCCCAGCACCCCAGCCTCTCTCCAGGGTCCCTGATCTTCCTTCTGTTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472525.1
CDS-3UTR CAA 90 bp ACAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTTTGGGGTCCAGGGCTTaGGAGACACGCAGGCAAGGG +
Preference number: 5 (lower is better)
Translates to: TERHLAEWDGVRGSKSLRLGSRA*ETRRQG
Trigger: CCCTTGCCTGCGTGTCTCCAAAGCCCTGGACCCCAA...ACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CAA 90 bp CAGACACAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTTGGGGTCCAGGGCTTaGGAGACACGCAGGCAAGGG +
Preference number: 5 (lower is better)
Translates to: QTQKDTWLSGMGSEGPKALGSRA*ETRRQG
Trigger: CCCTTGCCTGCGTGTCTCCAAAGCCCTGGACCCCAA...GGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTGTGTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CAA 90 bp ACAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTTTGCGCCCAGTGCTCTaGGGGTCCAGGGCTTTGGAG +
Preference number: 5 (lower is better)
Translates to: TERHLAEWDGVRGSKSLRLRPVL*GSRALE
Trigger: CTCCAAAGCCCTGGACCCCAAGAGCACTGGGCGCAA...ACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CAA 90 bp GGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGAAGGCAGCAGTGTGGAACTCCTTCACATTCTaGTGGGGGTCCAGGTGGATG +
Preference number: 5 (lower is better)
Translates to: GWGPRVQKPPSWEKAAVWNSFTF*WGSRWM
Trigger: CATCCACCTGGACCCCCACAAGAATGTGAAGGAGTT...CCACACTGCTGCCTTCTCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CAA 90 bp CAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCAGTGGCTGGCTCAGTTaGCCCTCGGTGCTCCCTTTC +
Preference number: 5 (lower is better)
Translates to: QKDTWLSGMGSEGPKASVSGWLS*PSVLPF
Trigger: GAAAGGGAGCACCGAGGGCAAACTGAGCCAGCCACT...GACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CAA 90 bp TTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGAAGGAGGTACAGGAACTTGTaGATCTGGGAGGAGGCGAGC +
Preference number: 5 (lower is better)
Translates to: LAEWDGVRGSKSLRPGRRRYRNL*IWEEAS
Trigger: GCTCGCCTCCTCCCAGATCAACAAGTTCCTGTACCT...CCTTCTCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CAA 90 bp TGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGAAGGCTGTAGGTACAGGAACTaGTTGATCTGGGAGGAGGCG +
Preference number: 5 (lower is better)
Translates to: WLSGMGSEGPKASVLGEGCRYRN*LIWEEA
Trigger: CGCCTCCTCCCAGATCAACAAGTTCCTGTACCTACA...GCCTTCTCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CAA 90 bp CAGACACAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCGCCTGTACCAACCGGTaGCTGAGTTCCAGGGCGGCA +
Preference number: 5 (lower is better)
Translates to: QTQKDTWLSGMGSEGPKAACTNR*LSSRAA
Trigger: TGCCGCCCTGGAACTCAGCAACCGGTTGGTACAGGC...GGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTGTGTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR CAA 90 bp CCAGACACAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCCCTCTCACAGCAGATaGGCAACGGGCAGGCTGGGA +
Preference number: 5 (lower is better)
Translates to: PDTERHLAEWDGVRGSKSPSHSR*ATGRLG
Trigger: TCCCAGCCTGCCCGTTGCCAATCTGCTGTGAGAGGG...GCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTGTGTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS GCA 90 bp TACTGGAGCAGGTTGACCAGCAGGGCACAGGAGTCGGCACAGCTGTaGACGTGTACCACATTGTTGGAGCAGCGCAGCTCGAATAGTGGC +
Preference number: 5 (lower is better)
Translates to: YWSRLTSRAQESAQL*TCTTLLEQRSSNSG
Trigger: GCCACTATTCGAGCTGCGCTGCTCCAACAATGTGGTACACGTGCACAGCTGTGCCGACTCCTGTGCCCTGCTGGTCAACCTGCTCCAGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CAA 90 bp CCTCTCACAGCAGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCAAGCAGTTGGCCAGCTaGAAGGCTGACTTGCACATC +
Preference number: 5 (lower is better)
Translates to: PLTADWQRAGWEGVLHSGKQLAS*KADLHI
Trigger: GATGTGCAAGTCAGCCTTCAAGCTGGCCAACTGCTT...GCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCTGCTGTGAGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CAA 90 bp CCCCCAGACACAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAGTCTCCACCTCACACTaGTCGGACAGGTACAAGGCG +
Preference number: 5 (lower is better)
Translates to: PPDTERHLAEWDGVRGSKVSTSH*SDRYKA
Trigger: CGCCTTGTACCTGTCCGACAAGTGTGAGGTGGAGAC...TTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTGTGTCTGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CAA 90 bp CCCCCAGACACAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAATGCACGTGTACCACATaGTTGGAGCAGCGCAGCTCG +
Preference number: 5 (lower is better)
Translates to: PPDTERHLAEWDGVRGSKCTCTT*LEQRSS
Trigger: CGAGCTGCGCTGCTCCAACAATGTGGTACACGTGCA...TTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTGTGTCTGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CAA 90 bp CCTCTCACAGCAGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCTGCTGGAAGCTTACCTaGCTCAGCTGGATCTCCATG +
Preference number: 5 (lower is better)
Translates to: PLTADWQRAGWEGVLHSGCWKLT*LSWISM
Trigger: CATGGAGATCCAGCTGAGCAAGGTAAGCTTCCAGCA...GCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCTGCTGTGAGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CAA 90 bp TTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGAAGGTGCTGGAAGCTTACCTaGCTCAGCTGGATCTCCATG +
Preference number: 5 (lower is better)
Translates to: LAEWDGVRGSKSLRPGRRCWKLT*LSWISM
Trigger: CATGGAGATCCAGCTGAGCAAGGTAAGCTTCCAGCA...CCTTCTCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CAA 90 bp CCCCCTCTCACAGCAGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGCCACATGCAGCGCTTaGATGGTGAGCATGTTAGAG +
Preference number: 5 (lower is better)
Translates to: PPLTADWQRAGWEGVLHSATCSA*MVSMLE
Trigger: CTCTAACATGCTCACCATCAAAGCGCTGCATGTGGC...ACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCTGCTGTGAGAGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CAA 90 bp TTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCCTGGGAGAAGGGCCACATGCAGCGCTTaGATGGTGAGCATGTTAGAG +
Preference number: 5 (lower is better)
Translates to: LAEWDGVRGSKSLRPGRRATCSA*MVSMLE
Trigger: CTCTAACATGCTCACCATCAAAGCGCTGCATGTGGC...CCTTCTCCCAGGACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CAA 90 bp TTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATCCCCTGAAGGGCTAGTGAAGAAGTCCTaGAGGAAGAAGAGGGCATCC +
Preference number: 5 (lower is better)
Translates to: LATGRLGRRPSQWPSPEGLVKKS*RKKRAS
Trigger: GGATGCCCTCTTCTTCCTCAAGGACTTCTTCACTAG...CCCTTCAGGGGATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CAA 90 bp CCAGACACAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCAGGTCCCGGAACCCTaGGAAGAGCTGGACAACCGA +
Preference number: 5 (lower is better)
Translates to: PDTERHLAEWDGVRGSKSQVPEP*EELDNR
Trigger: TCGGTTGTCCAGCTCTTCCAAGGGTTCCGGGACCTG...GCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTGTGTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS CCA 90 bp CTTGGTGGCATCAAACTCGGTGAAAAAGTGCGTGGCGAGGTCAGGTaGTCCGGAAGATGGGGCAGACGTCTGAAGCAAGGTCAGGGTCAC +
Preference number: 5 (lower is better)
Translates to: LGGIKLGEKVRGEVR*SGRWGRRLKQGQGH
Trigger: GTGACCCTGACCTTGCTTCAGACGTCTGCCCCATCTTCCGGACCACCTGACCTCGCCACGCACTTTTTCACCGAGTTTGATGCCACCAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CAA 90 bp CAGACACAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCCCAGCGGTGACTCCATaGACTCCAGCACCTCGTTCA +
Preference number: 5 (lower is better)
Translates to: QTQKDTWLSGMGSEGPKAPAVTP*TPAPRS
Trigger: TGAACGAGGTGCTGGAGTCAATGGAGTCACCGCTGG...GGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTGTGTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000421419.3
CDS-3UTR CAA 90 bp TTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATCCCCTGAAGGGAGCTTGAAGGCTGACTaGCACATCTTAAAGCTGTCG +
Preference number: 5 (lower is better)
Translates to: LATGRLGRRPSQWPSPEGSLKAD*HILKLS
Trigger: CGACAGCTTTAAGATGTGCAAGTCAGCCTTCAAGCT...CCCTTCAGGGGATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CAA 90 bp AGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATCCCCTGAACTCGGTGGTAGAGTGTaGCCTTTTCAGCTTCCAGAC +
Preference number: 5 (lower is better)
Translates to: RLATGRLGRRPSQWPSPELGGRV*PFQLPD
Trigger: GTCTGGAAGCTGAAAAGGCAACACTCTACCACCGAG...TTCAGGGGATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CAA 90 bp AGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATCCCCTGAAACGTGTACCACATTGTaGGAGCAGCGCAGCTCGAAT +
Preference number: 5 (lower is better)
Translates to: RLATGRLGRRPSQWPSPETCTTL*EQRSSN
Trigger: ATTCGAGCTGCGCTGCTCCAACAATGTGGTACACGT...TTCAGGGGATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CAA 90 bp AGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATCCCCTGAATGTAGGTACAGGAACTaGTTGATCTGGGAGGAGGCG +
Preference number: 5 (lower is better)
Translates to: RLATGRLGRRPSQWPSPECRYRN*LIWEEA
Trigger: CGCCTCCTCCCAGATCAACAAGTTCCTGTACCTACA...TTCAGGGGATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CAA 90 bp CAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTCAAGCAGTTGGCCAGCTaGAAGGCTGACTTGCACATC +
Preference number: 5 (lower is better)
Translates to: QKDTWLSGMGSEGPKASVKQLAS*KADLHI
Trigger: GATGTGCAAGTCAGCCTTCAAGCTGGCCAACTGCTT...GACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CAA 90 bp CCCCCAGACACAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAACTCCTTCACATTCTaGTGGGGGTCCAGGTGGATG +
Preference number: 5 (lower is better)
Translates to: PPDTERHLAEWDGVRGSKNSFTF*WGSRWM
Trigger: CATCCACCTGGACCCCCACAAGAATGTGAAGGAGTT...TTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTGTGTCTGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CAA 90 bp CCCCCAGACACAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAACGTGTACCACATTGTaGGAGCAGCGCAGCTCGAAT +
Preference number: 5 (lower is better)
Translates to: PPDTERHLAEWDGVRGSKTCTTL*EQRSSN
Trigger: ATTCGAGCTGCGCTGCTCCAACAATGTGGTACACGT...TTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTGTGTCTGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CAA 90 bp ACAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTAGGTACAGGAACTTGTaGATCTGGGAGGAGGCGAGC +
Preference number: 5 (lower is better)
Translates to: TERHLAEWDGVRGSKSLRRYRNL*IWEEAS
Trigger: GCTCGCCTCCTCCCAGATCAACAAGTTCCTGTACCT...ACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS CCA 90 bp GTAGAGTGTTGCCTTTTCAGCTTCCAGACAGAAGTAGCCAAGTCCTaGCTGGCCACAGTACTGGGAGACGCTGAAGAGGGTACCGTGCTC +
Preference number: 5 (lower is better)
Translates to: VECCLFSFQTEVAKS*LATVLGDAEEGTVL
Trigger: GAGCACGGTACCCTCTTCAGCGTCTCCCAGTACTGTGGCCAGCCAGGACTTGGCTACTTCTGTCTGGAAGCTGAAAAGGCAACACTCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CAA 90 bp ACAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTGCTCTTTCACACAGTTaGACCATGGCCACAGCCATC +
Preference number: 5 (lower is better)
Translates to: TERHLAEWDGVRGSKSLRALSHS*TMATAI
Trigger: GATGGCTGTGGCCATGGTCAAACTGTGTGAAAGAGC...ACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000421419.3
CDS-3UTR CAA 90 bp CCCCCAGACACAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAATCAGTGTTATCCAGGTaGAGAAGGGGGTTGGTAAGG +
Preference number: 5 (lower is better)
Translates to: PPDTERHLAEWDGVRGSKSVLSR*RRGLVR
Trigger: CCTTACCAACCCCCTTCTCAACCTGGATAACACTGA...TTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTGTGTCTGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CAA 90 bp CTCACAGCAGATTGGCAACGGGCAGGCTGGGAAGGCGTCCTTCACAGTGGCCATAGCTTGAAGGCTGACTaGCACATCTTAAAGCTGTCG +
Preference number: 5 (lower is better)
Translates to: LTADWQRAGWEGVLHSGHSLKAD*HILKLS
Trigger: CGACAGCTTTAAGATGTGCAAGTCAGCCTTCAAGCT...ATGGCCACTGTGAAGGACGCCTTCCCAGCCTGCCCGTTGCCAATCTGCTGTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CAA 90 bp CCCCCAGACACAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAACTAGTGAAGAAGTCCTaGAGGAAGAAGAGGGCATCC +
Preference number: 5 (lower is better)
Translates to: PPDTERHLAEWDGVRGSKLVKKS*RKKRAS
Trigger: GGATGCCCTCTTCTTCCTCAAGGACTTCTTCACTAG...TTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTGTGTCTGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CAA 90 bp CAGACACTGACCCACGCACTCACGGAGCTTAAAAATAATACATCGAACCACACGCCTAGCGGGCGGCTCTaGTTCAGCTTGTCAGCCAGG +
Preference number: 5 (lower is better)
Translates to: QTLTHALTELKNNTSNHTPSGRL*FSLSAR
Trigger: CCTGGCTGACAAGCTGAACAAGAGCCGCCCGCTAGG...CGTGTGGTTCGATGTATTATTTTTAAGCTCCGTGAGTGCGTGGGTCAGTGTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CAA 90 bp CACTCACGGAGCTTAAAAATAATACATCGAACCACACGGATATCATCCCCTCCTCCGATGGGTAGATGGTaGGGGCCAGCTGAGCCGGGG +
Preference number: 5 (lower is better)
Translates to: HSRSLKIIHRTTRISSPPPMGRW*GPAEPG
Trigger: CCCCGGCTCAGCTGGCCCCAACCATCTACCCATCGG...AGGAGGGGATGATATCCGTGTGGTTCGATGTATTATTTTTAAGCTCCGTGAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CAA 90 bp ACAGAAAGACACTTGGCTGAGTGGGATGGGGTCCGAGGGTCCAAAAGCCTCCGTGTGTCCATGATGATGTaGCTGGAGAGAGTGAAGGTC +
Preference number: 5 (lower is better)
Translates to: TERHLAEWDGVRGSKSLRVSMMM*LERVKV
Trigger: GACCTTCACTCTCTCCAGCAACATCATCATGGACAC...ACGGAGGCTTTTGGACCCTCGGACCCCATCCCACTCAGCCAAGTGTCTTTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CAA 90 bp CACTCACGGAGCTTAAAAATAATACATCGAACCACACGGATATCATCCCCTCCTGAGTTCTGGGGCCGGTaGGGGCCAGAGCAGCGGGAA +
Preference number: 5 (lower is better)
Translates to: HSRSLKIIHRTTRISSPPEFWGR*GPEQRE
Trigger: TTCCCGCTGCTCTGGCCCCAACCGGCCCCAGAACTC...AGGAGGGGATGATATCCGTGTGGTTCGATGTATTATTTTTAAGCTCCGTGAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CAA 90 bp CAGACACTGACCCACGCACTCACGGAGCTTAAAAATAATACATCGAACCACACGCTCGGAGCAGTTGAGTaGGGCCAGGCCGATGAGGAG +
Preference number: 5 (lower is better)
Translates to: QTLTHALTELKNNTSNHTLGAVE*GQADEE
Trigger: CTCCTCATCGGCCTGGCCCAACTCAACTGCTCCGAG...CGTGTGGTTCGATGTATTATTTTTAAGCTCCGTGAGTGCGTGGGTCAGTGTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CAA 90 bp CAGACACTGACCCACGCACTCACGGAGCTTAAAAATAATACATCGAACCACACGTTGAGGGCGTGGTCCTaGTGGGCGTCGGGGACAATC +
Preference number: 5 (lower is better)
Translates to: QTLTHALTELKNNTSNHTLRAWS*WASGTI
Trigger: GATTGTCCCCGACGCCCACAAGGACCACGCCCTCAA...CGTGTGGTTCGATGTATTATTTTTAAGCTCCGTGAGTGCGTGGGTCAGTGTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR CAA 90 bp CAGACACTGACCCACGCACTCACGGAGCTTAAAAATAATACATCGAACCACACGTGGCGCAAGGTGGCTTaGTGCAACCGCAGTGTCACC +
Preference number: 5 (lower is better)
Translates to: QTLTHALTELKNNTSNHTWRKVA*CNRSVT
Trigger: GGTGACACTGCGGTTGCACAAAGCCACCTTGCGCCA...CGTGTGGTTCGATGTATTATTTTTAAGCTCCGTGAGTGCGTGGGTCAGTGTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CAA 90 bp TTCATGCAGACACTGACCCACGCACTCACGGAGCTTAAAAATAATACATCGAACCCGGGCAGCTGGTTCTaGCGGATGTCCTGCAGCCAC +
Preference number: 5 (lower is better)
Translates to: FMQTLTHALTELKNNTSNPGSWF*RMSCSH
Trigger: GTGGCTGCAGGACATCCGCAAGAACCAGCTGCCCGG...GTTCGATGTATTATTTTTAAGCTCCGTGAGTGCGTGGGTCAGTGTCTGCATGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CAA 90 bp CAGACACTGACCCACGCACTCACGGAGCTTAAAAATAATACATCGAACCACACGCAGGTCCCGGAACCCTaGGAAGAGCTGGACAACCGA +
Preference number: 5 (lower is better)
Translates to: QTLTHALTELKNNTSNHTQVPEP*EELDNR
Trigger: TCGGTTGTCCAGCTCTTCCAAGGGTTCCGGGACCTG...CGTGTGGTTCGATGTATTATTTTTAAGCTCCGTGAGTGCGTGGGTCAGTGTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR CAA 90 bp CACTCACGGAGCTTAAAAATAATACATCGAACCACACGGATATCATCCCCTCCTTCGGGGACAATCTGGTaGCGCATGCCCCCGAGCAGG +
Preference number: 5 (lower is better)
Translates to: HSRSLKIIHRTTRISSPPSGTIW*RMPPSR
Trigger: CCTGCTCGGGGGCATGCGCAACCAGATTGTCCCCGA...AGGAGGGGATGATATCCGTGTGGTTCGATGTATTATTTTTAAGCTCCGTGAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR CAA 90 bp CACTCACGGAGCTTAAAAATAATACATCGAACCACACGGATATCATCCCCTCCTACCCCAGGCTCAGTCTaGGGCACTGTCCGAGCGCCA +
Preference number: 5 (lower is better)
Translates to: HSRSLKIIHRTTRISSPPTPGSV*GTVRAP
Trigger: TGGCGCTCGGACAGTGCCCAAGACTGAGCCTGGGGT...AGGAGGGGATGATATCCGTGTGGTTCGATGTATTATTTTTAAGCTCCGTGAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS-3UTR CAA 90 bp CACTCACGGAGCTTAAAAATAATACATCGAACCACACGGATATCATCCCCTCCTTGGGGCAGGAAGTACTaGCGCCCAGTGCTCTTGGGG +
Preference number: 5 (lower is better)
Translates to: HSRSLKIIHRTTRISSPPWGRKY*RPVLLG
Trigger: CCCCAAGAGCACTGGGCGCAAGTACTTCCTGCCCCA...AGGAGGGGATGATATCCGTGTGGTTCGATGTATTATTTTTAAGCTCCGTGAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CAA 90 bp CAGACACTGACCCACGCACTCACGGAGCTTAAAAATAATACATCGAACCACACGTGCACGTGTACCACATaGTTGGAGCAGCGCAGCTCG +
Preference number: 5 (lower is better)
Translates to: QTLTHALTELKNNTSNHTCTCTT*LEQRSS
Trigger: CGAGCTGCGCTGCTCCAACAATGTGGTACACGTGCA...CGTGTGGTTCGATGTATTATTTTTAAGCTCCGTGAGTGCGTGGGTCAGTGTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CAA 90 bp CACTCACGGAGCTTAAAAATAATACATCGAACCACACGGATATCATCCCCTCCTGCATCCTGGTCCACATaGAGCCGCAGGGGCATCAGC +
Preference number: 5 (lower is better)
Translates to: HSRSLKIIHRTTRISSPPASWST*SRRGIS
Trigger: GCTGATGCCCCTGCGGCTCAATGTGGACCAGGATGC...AGGAGGGGATGATATCCGTGTGGTTCGATGTATTATTTTTAAGCTCCGTGAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CAA 90 bp TTCATGCAGACACTGACCCACGCACTCACGGAGCTTAAAAATAATACATCGAACAGGGCAACGCTGCCCTaGTACAGATCGAGGCTGAGC +
Preference number: 5 (lower is better)
Translates to: FMQTLTHALTELKNNTSNRATLP*YRSRLS
Trigger: GCTCAGCCTCGATCTGTACAAGGGCAGCGTTGCCCT...GTTCGATGTATTATTTTTAAGCTCCGTGAGTGCGTGGGTCAGTGTCTGCATGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377264.8
CDS-3UTR CAA 90 bp CAGACACTGACCCACGCACTCACGGAGCTTAAAAATAATACATCGAACCACACGGTGTCCATGATGATGTaGCTGGAGAGAGTGAAGGTC +
Preference number: 5 (lower is better)
Translates to: QTLTHALTELKNNTSNHTVSMMM*LERVKV
Trigger: GACCTTCACTCTCTCCAGCAACATCATCATGGACAC...CGTGTGGTTCGATGTATTATTTTTAAGCTCCGTGAGTGCGTGGGTCAGTGTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CAA 90 bp CACTCACGGAGCTTAAAAATAATACATCGAACCACACGGATATCATCCCCTCCTGCTCTTTCACACAGTTaGACCATGGCCACAGCCATC +
Preference number: 5 (lower is better)
Translates to: HSRSLKIIHRTTRISSPPALSHS*TMATAI
Trigger: GATGGCTGTGGCCATGGTCAAACTGTGTGAAAGAGC...AGGAGGGGATGATATCCGTGTGGTTCGATGTATTATTTTTAAGCTCCGTGAGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000421419.3
CDS-3UTR CAA 90 bp TTCATGCAGACACTGACCCACGCACTCACGGAGCTTAAAAATAATACATCGAACCTCGGTGGTAGAGTGTaGCCTTTTCAGCTTCCAGAC +
Preference number: 5 (lower is better)
Translates to: FMQTLTHALTELKNNTSNLGGRV*PFQLPD
Trigger: GTCTGGAAGCTGAAAAGGCAACACTCTACCACCGAG...GTTCGATGTATTATTTTTAAGCTCCGTGAGTGCGTGGGTCAGTGTCTGCATGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS-3UTR CAA 90 bp TTCATGCAGACACTGACCCACGCACTCACGGAGCTTAAAAATAATACATCGAACTCAGTGTTATCCAGGTaGAGAAGGGGGTTGGTAAGG +
Preference number: 5 (lower is better)
Translates to: FMQTLTHALTELKNNTSNSVLSR*RRGLVR
Trigger: CCTTACCAACCCCCTTCTCAACCTGGATAACACTGA...GTTCGATGTATTATTTTTAAGCTCCGTGAGTGCGTGGGTCAGTGTCTGCATGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS CCA 72 bp CCGCCCAGGGGTCCGGCTCAGGCCGCAGGTCGGCAATaGGGAAGCGCAGCCGCAGCGTGGCCCGGGGTGCAG +
Preference number: 6 (lower is better)
Translates to: PPRGPAQAAGRQ*GSAAAAWPGVQ
Trigger: CTGCACCCCGGGCCACGCTGCGGCTGCGCTTCCCCATTGCCGACCTGCGGCCTGAGCCGGACCCCTGGGCGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS GCA 72 bp CCACACCCTCCCGCAGGTCGGCAGGCTGCTGGCCCCTaGGCAGCCTCCGCGCAGAGCGCTTATCCTGCAGGG +
Preference number: 6 (lower is better)
Translates to: PHPPAGRQAAGP*AASAQSAYPAG
Trigger: CCCTGCAGGATAAGCGCTCTGCGCGGAGGCTGCGCAGGGGCCAGCAGCCTGCCGACCTGCGGGAGGGTGTGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS CCA 72 bp CCTGGCGCTGGACCCCGGCGGGGCTGCAAGGTGAGCTaGAGGCCGGACACGCGCACTGTGCAGTGGTCGGTG +
Preference number: 6 (lower is better)
Translates to: PGAGPRRGCKVS*RPDTRTVQWSV
Trigger: CACCGACCACTGCACAGTGCGCGTGTCCGGCCTCCAGCTCACCTTGCAGCCCCGCCGGGGTCCAGCGCCAGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000421419.3
CDS CCA 72 bp ACGCCTTCGGCCTGCCCTTCCAGGGGGCTGCTGGGCTaGGCTCGAGTCTCGGGGCGAGCCTCAGCGGAGGTC +
Preference number: 6 (lower is better)
Translates to: TPSACPSRGLLG*ARVSGRASAEV
Trigger: GACCTCCGCTGAGGCTCGCCCCGAGACTCGAGCCCAGCCCAGCAGCCCCCTGGAAGGGCAGGCCGAAGGCGT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS TCA 72 bp CCCTGCCCTCACCTGGACCCCGGCGGGGCTGCAAGGTaGGCTGGAGGCCGGACACGCGCACTGTGCAGTGGT +
Preference number: 6 (lower is better)
Translates to: PCPHLDPGGAAR*AGGRTRALCSG
Trigger: ACCACTGCACAGTGCGCGTGTCCGGCCTCCAGCTCACCTTGCAGCCCCGCCGGGGTCCAGGTGAGGGCAGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000461701.5
ENST00000461955.1
CDS CCA 72 bp CCCTCACCTGGACCCCGGCGGGGCTGCAAGGTGAGCTaGAGGCCGGACACGCGCACTGTGCAGTGGTCGGTG +
Preference number: 6 (lower is better)
Translates to: PSPGPRRGCKVS*RPDTRTVQWSV
Trigger: CACCGACCACTGCACAGTGCGCGTGTCCGGCCTCCAGCTCACCTTGCAGCCCCGCCGGGGTCCAGGTGAGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000461701.5
ENST00000461955.1
CDS TCA 72 bp GCTGGAGGCCGGACACGCGCACTGTGCAGTGGTCGGTaGGCAGAGCAGCCCAGGGCACGGCCACCTCGATGG +
Preference number: 6 (lower is better)
Translates to: AGGRTRALCSGR*AEQPRARPPRW
Trigger: CCATCGAGGTGGCCGTGCCCTGGGCTGCTCTGCTCACCGACCACTGCACAGTGCGCGTGTCCGGCCTCCAGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377264.8
ENST00000421419.3
ENST00000461701.5
ENST00000461955.1
CDS TCA 72 bp GCCAGCTGCAGCAGCTTGTGCAGGAAGGCAGGCGGCTaGTGCACGTCCACCGGCGGCGCCTGGCTTGGGTCC +
Preference number: 6 (lower is better)
Translates to: ASCSSLCRKAGG*CTSTGGAWLGS
Trigger: GGACCCAAGCCAGGCGCCGCCGGTGGACGTGCATCAGCCGCCTGCCTTCCTGCACAAGCTGCTGCAGCTGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000461701.5
CDS GCA 72 bp GGGCCTGGGCAGAGAGCCGGCGGGAGGCCATGTCGCTaGGCACAGAGGAGGCCAGGTCTACATCGGAGAGGG +
Preference number: 6 (lower is better)
Translates to: GPGQRAGGRPCR*AQRRPGLHRRG
Trigger: CCCTCTCCGATGTAGACCTGGCCTCCTCTGTGCGCAGCGACATGGCCTCCCGCCGGCTCTCTGCCCAGGCCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS GCA 72 bp TGGTCTCTACGCCTTCGGCCTGCCCTTCCAGGGGGCTaGTGGGCTGGGCTCGAGTCTCGGGGCGAGCCTCAG +
Preference number: 6 (lower is better)
Translates to: WSLRLRPALPGG*WAGLESRGEPQ
Trigger: CTGAGGCTCGCCCCGAGACTCGAGCCCAGCCCAGCAGCCCCCTGGAAGGGCAGGCCGAAGGCGTAGAGACCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS CCA 72 bp GGGTCCAGGTGGATGCGCACAGCAGTGGACAACATGTaGGGTCCCCGGCCCTGGCCCTTGCGGCCCGAGGCT +
Preference number: 6 (lower is better)
Translates to: GSRWMRTAVDNM*GPRPWPLRPEA
Trigger: AGCCTCGGGCCGCAAGGGCCAGGGCCGGGGACCCCACATGTTGTCCACTGCTGTGCGCATCCACCTGGACCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS CAA 72 bp GCACCTCCAGCTGCCCGAAGTGCACTTCCATGCTGGTaGTCCGCCGGCCCCGACTGCCCGTCCGCAGCTCCC +
Preference number: 6 (lower is better)
Translates to: APPAARSALPCW*SAGPDCPSAAP
Trigger: GGGAGCTGCGGACGGGCAGTCGGGGCCGGCGGACAACCAGCATGGAAGTGCACTTCGGGCAGCTGGAGGTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS CAA 90 bp CGCCACTTGAGGGCGTGGTCCTTGTGGGCGTCGGGGACAATCTGGTaGCGCATGCCCCCGAGCAGGCTGGACGTGGCCTCCGTGGCCAGG +
Preference number: 6 (lower is better)
Translates to: RHLRAWSLWASGTIW*RMPPSRLDVASVAR
Trigger: CCTGGCCACGGAGGCCACGTCCAGCCTGCTCGGGGGCATGCGCAACCAGATTGTCCCCGACGCCCACAAGGACCACGCCCTCAAGTGGCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS GCA 72 bp GTGGCCCGGGGTGCAGAGAGCCGAAATACCGTCTGCTaGTCCATCGCCGGCAGGGGCTCTGTCAGCAGGCCG +
Preference number: 6 (lower is better)
Translates to: VARGAESRNTVC*SIAGRGSVSRP
Trigger: CGGCCTGCTGACAGAGCCCCTGCCGGCGATGGAGCAGCAGACGGTATTTCGGCTCTCTGCACCCCGGGCCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS GCA 72 bp AGGTCCCGGAACCCTTGGAAGAGCTGGACAACCGAGTaGATGGGGCCCACGCCTCCCAGCAGGCCGGGCAGC +
Preference number: 6 (lower is better)
Translates to: RSRNPWKSWTTE*MGPTPPSRPGS
Trigger: GCTGCCCGGCCTGCTGGGAGGCGTGGGCCCCATGCACTCGGTTGTCCAGCTCTTCCAAGGGTTCCGGGACCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS GCA 72 bp GGTCCTTGTGGGCGTCGGGGACAATCTGGTTGCGCATaGCCCCGAGCAGGCTGGACGTGGCCTCCGTGGCCA +
Preference number: 6 (lower is better)
Translates to: GPCGRRGQSGCA*PRAGWTWPPWP
Trigger: TGGCCACGGAGGCCACGTCCAGCCTGCTCGGGGGCATGCGCAACCAGATTGTCCCCGACGCCCACAAGGACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS CCA 72 bp CCAGCACCTCCAGCTGCCCGAAGTGCACTTCCATGCTaGTTGTCCGCCGGCCCCGACTGCCCGTCCGCAGCT +
Preference number: 6 (lower is better)
Translates to: PAPPAARSALPC*LSAGPDCPSAA
Trigger: AGCTGCGGACGGGCAGTCGGGGCCGGCGGACAACCAGCATGGAAGTGCACTTCGGGCAGCTGGAGGTGCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS CCA 72 bp TTAGGCACACGGCGCAGGATCTGTGTGTGGCGCAGATaGGCGCAGGGCCGAGCTGAGGCCTGGGAGCCCAGC +
Preference number: 6 (lower is better)
Translates to: LGTRRRICVWRR*AQGRAEAWEPS
Trigger: GCTGGGCTCCCAGGCCTCAGCTCGGCCCTGCGCCCATCTGCGCCACACACAGATCCTGCGCCGTGTGCCTAA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS CCA 72 bp GCCGCAGGTCGGCAATGGGGAAGCGCAGCCGCAGCGTaGCCCGGGGTGCAGAGAGCCGAAATACCGTCTGCT +
Preference number: 6 (lower is better)
Translates to: AAGRQWGSAAAA*PGVQRAEIPSA
Trigger: AGCAGACGGTATTTCGGCTCTCTGCACCCCGGGCCACGCTGCGGCTGCGCTTCCCCATTGCCGACCTGCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS CCA 72 bp GGCTGTGTCCACCTCCTGGGGCCTCCTGCGAACCAGTaGTCTCTACGCCTTCGGCCTGCCCTTCCAGGGGGC +
Preference number: 6 (lower is better)
Translates to: GCVHLLGPPANQ*SLRLRPALPGG
Trigger: GCCCCCTGGAAGGGCAGGCCGAAGGCGTAGAGACCACTGGTTCGCAGGAGGCCCCAGGAGGTGGACACAGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS CCA 72 bp CCCGGAACCCTTGGAAGAGCTGGACAACCGAGTGCATaGGGCCCACGCCTCCCAGCAGGCCGGGCAGCTGGT +
Preference number: 6 (lower is better)
Translates to: PGTLGRAGQPSA*GPRLPAGRAAG
Trigger: ACCAGCTGCCCGGCCTGCTGGGAGGCGTGGGCCCCATGCACTCGGTTGTCCAGCTCTTCCAAGGGTTCCGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS CAA 72 bp AGGGCGTGGTCCTTGTGGGCGTCGGGGACAATCTGGTaGCGCATGCCCCCGAGCAGGCTGGACGTGGCCTCC +
Preference number: 6 (lower is better)
Translates to: RAWSLWASGTIW*RMPPSRLDVAS
Trigger: GGAGGCCACGTCCAGCCTGCTCGGGGGCATGCGCAACCAGATTGTCCCCGACGCCCACAAGGACCACGCCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS CAA 90 bp GACACTCCAGCACCTCCAGCTGCCCGAAGTGCACTTCCATGCTGGTaGTCCGCCGGCCCCGACTGCCCGTCCGCAGCTCCCAGGACAGCT +
Preference number: 6 (lower is better)
Translates to: DTPAPPAARSALPCW*SAGPDCPSAAPRTA
Trigger: AGCTGTCCTGGGAGCTGCGGACGGGCAGTCGGGGCCGGCGGACAACCAGCATGGAAGTGCACTTCGGGCAGCTGGAGGTGCTGGAGTGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS CAA 90 bp TGCCGGGCACCCCAGGCTCAGTCTTGGGCACTGTCCGAGCGCCACTaGAGGGCGTGGTCCTTGTGGGCGTCGGGGACAATCTGGTTGCGC +
Preference number: 6 (lower is better)
Translates to: CRAPQAQSWALSERH*RAWSLWASGTIWLR
Trigger: GCGCAACCAGATTGTCCCCGACGCCCACAAGGACCACGCCCTCAAGTGGCGCTCGGACAGTGCCCAAGACTGAGCCTGGGGTGCCCGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS GCA 72 bp ACTCCAGCACCTCCAGCTGCCCGAAGTGCACTTCCATaGTGGTTGTCCGCCGGCCCCGACTGCCCGTCCGCA +
Preference number: 6 (lower is better)
Translates to: TPAPPAARSALP*WLSAGPDCPSA
Trigger: TGCGGACGGGCAGTCGGGGCCGGCGGACAACCAGCATGGAAGTGCACTTCGGGCAGCTGGAGGTGCTGGAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS GCA 72 bp AGCGTGGCCCGGGGTGCAGAGAGCCGAAATACCGTCTaGTGCTCCATCGCCGGCAGGGGCTCTGTCAGCAGG +
Preference number: 6 (lower is better)
Translates to: SVARGAESRNTV*CSIAGRGSVSR
Trigger: CCTGCTGACAGAGCCCCTGCCGGCGATGGAGCAGCAGACGGTATTTCGGCTCTCTGCACCCCGGGCCACGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS GCA 72 bp GGCAATGGGGAAGCGCAGCCGCAGCGTGGCCCGGGGTaGAGAGAGCCGAAATACCGTCTGCTGCTCCATCGC +
Preference number: 6 (lower is better)
Translates to: GNGEAQPQRGPG*REPKYRLLLHR
Trigger: GCGATGGAGCAGCAGACGGTATTTCGGCTCTCTGCACCCCGGGCCACGCTGCGGCTGCGCTTCCCCATTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS CCA 72 bp GAGCCGGGGGAGCGAAACTGGGAAGGTCCAGGTGACTaGGCAGCGGGTAGTCATCCACGGCCGCTCGGTGGT +
Preference number: 6 (lower is better)
Translates to: EPGERNWEGPGD*AAGSHPRPLGG
Trigger: ACCACCGAGCGGCCGTGGATGACTACCCGCTGCCCAGTCACCTGGACCTTCCCAGTTTCGCTCCCCCGGCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS CCA 72 bp TTGAGGGCGTGGTCCTTGTGGGCGTCGGGGACAATCTaGTTGCGCATGCCCCCGAGCAGGCTGGACGTGGCC +
Preference number: 6 (lower is better)
Translates to: LRAWSLWASGTI*LRMPPSRLDVA
Trigger: GGCCACGTCCAGCCTGCTCGGGGGCATGCGCAACCAGATTGTCCCCGACGCCCACAAGGACCACGCCCTCAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS CCA 72 bp GCACTGTCCGAGCGCCACTTGAGGGCGTGGTCCTTGTaGGCGTCGGGGACAATCTGGTTGCGCATGCCCCCG +
Preference number: 6 (lower is better)
Translates to: ALSERHLRAWSL*ASGTIWLRMPP
Trigger: CGGGGGCATGCGCAACCAGATTGTCCCCGACGCCCACAAGGACCACGCCCTCAAGTGGCGCTCGGACAGTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS CAA 72 bp CAGGCGGCTGATGCACGTCCACCGGCGGCGCCTGGCTaGGGTCCCGCACTGCCTCATCACAGTACTCCAGTC +
Preference number: 6 (lower is better)
Translates to: QAADARPPAAPG*GPALPHHSTPV
Trigger: GACTGGAGTACTGTGATGAGGCAGTGCGGGACCCAAGCCAGGCGCCGCCGGTGGACGTGCATCAGCCGCCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000461701.5
CDS CAA 90 bp GCAGGAAGGCAGGCGGCTGATGCACGTCCACCGGCGGCGCCTGGCTaGGGTCCCGCACTGCCTCATCACAGTACTCCAGTCTCTGCACAC +
Preference number: 6 (lower is better)
Translates to: AGRQAADARPPAAPG*GPALPHHSTPVSAH
Trigger: GTGTGCAGAGACTGGAGTACTGTGATGAGGCAGTGCGGGACCCAAGCCAGGCGCCGCCGGTGGACGTGCATCAGCCGCCTGCCTTCCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377264.8
CDS CAA 90 bp GCTCAGTCTTGGGCACTGTCCGAGCGCCACTTGAGGGCGTGGTCCTaGTGGGCGTCGGGGACAATCTGGTTGCGCATGCCCCCGAGCAGG +
Preference number: 6 (lower is better)
Translates to: AQSWALSERHLRAWS*WASGTIWLRMPPSR
Trigger: CCTGCTCGGGGGCATGCGCAACCAGATTGTCCCCGACGCCCACAAGGACCACGCCCTCAAGTGGCGCTCGGACAGTGCCCAAGACTGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS CAA 90 bp GCAGGAAGGCAGGCGGCTGATGCACGTCCACCGGCGGCGCCTGGCTaGGGTCCCGCACTGCCTCATCACAGTACTCCAGTCTGGAGAGTG +
Preference number: 6 (lower is better)
Translates to: AGRQAADARPPAAPG*GPALPHHSTPVWRV
Trigger: CACTCTCCAGACTGGAGTACTGTGATGAGGCAGTGCGGGACCCAAGCCAGGCGCCGCCGGTGGACGTGCATCAGCCGCCTGCCTTCCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461701.5
CDS TCA 72 bp AGGTGCCCGCAGCAAGTCCGTGCTGCCGATCGGCCGTaGGAAGTAACCGTCCCTCACAACGATGGGGCCGGG +
Preference number: 6 (lower is better)
Translates to: RCPQQVRAADRP*EVTVPHNDGAG
Trigger: CCCGGCCCCATCGTTGTGAGGGACGGTTACTTCTCACGGCCGATCGGCAGCACGGACTTGCTGCGGGCACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS TCA 72 bp AGCCTGCAGAGCTGCCCCATCACACCTAGGCCGTCCTaGACCACCATGTCCAGCCCGGAGGCTCAGGCCAGC +
Preference number: 6 (lower is better)
Translates to: SLQSCPITPRPS*TTMSSPEAQAS
Trigger: GCTGGCCTGAGCCTCCGGGCTGGACATGGTGGTTCAGGACGGCCTAGGTGTGATGGGGCAGCTCTGCAGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461701.5
CDS GCA 72 bp GCCAGACGAGGGAGACCTCACGTAGCACCACCCGAGTaGTGGGCACTGGGAAATGGGCAGGTGCCCGCAGCA +
Preference number: 6 (lower is better)
Translates to: ARRGRPHVAPPE*WALGNGQVPAA
Trigger: TGCTGCGGGCACCTGCCCATTTCCCAGTGCCCAGCACTCGGGTGGTGCTACGTGAGGTCTCCCTCGTCTGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS GCA 72 bp ATCACCTGGCCTCTGGACACCAGTCCGGGCTCACGATaGAGCCCACCTCCCCAACCCTACCACCACCGAGGC +
Preference number: 6 (lower is better)
Translates to: ITWPLDTSPGSR*SPPPQPYHHRG
Trigger: GCCTCGGTGGTGGTAGGGTTGGGGAGGTGGGCTGCATCGTGAGCCCGGACTGGTGTCCAGAGGCCAGGTGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461701.5
CDS CCA 72 bp AGGCGGCTGATGCACGTCCACCGGCGGCGCCTGGCTTaGGTCCCGCACTGCCTCATCACAGTACTCCAGTCT +
Preference number: 6 (lower is better)
Translates to: RRLMHVHRRRLA*VPHCLITVLQS
Trigger: AGACTGGAGTACTGTGATGAGGCAGTGCGGGACCCAAGCCAGGCGCCGCCGGTGGACGTGCATCAGCCGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000461701.5
CDS CCA 72 bp GGGGGACCAGGCCCACTGCTAAGCTCTGACCGGAACTaGGGCTCACTCAGCTCCAGCCGAAGCTGCTCAGCC +
Preference number: 6 (lower is better)
Translates to: GGPGPLLSSDRN*GSLSSSRSCSA
Trigger: GGCTGAGCAGCTTCGGCTGGAGCTGAGTGAGCCCCAGTTCCGGTCAGAGCTTAGCAGTGGGCCTGGTCCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS CCA 72 bp CCGCTCGGTCACCCCTTCCTCCGATGGGTAGATGGTTaGGGCCAGCTGAGCCGGGGGAGCGAAACTGGGAAG +
Preference number: 6 (lower is better)
Translates to: PLGHPFLRWVDG*GQLSRGSETGK
Trigger: CTTCCCAGTTTCGCTCCCCCGGCTCAGCTGGCCCCAACCATCTACCCATCGGAGGAAGGGGTGACCGAGCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS CAA 72 bp TGGGCACTGTCCGAGCGCCACTTGAGGGCGTGGTCCTaGTGGGCGTCGGGGACAATCTGGTTGCGCATGCCC +
Preference number: 6 (lower is better)
Translates to: WALSERHLRAWS*WASGTIWLRMP
Trigger: GGGCATGCGCAACCAGATTGTCCCCGACGCCCACAAGGACCACGCCCTCAAGTGGCGCTCGGACAGTGCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS CAA 72 bp CCCCAGGCTCAGTCTTGGGCACTGTCCGAGCGCCACTaGAGGGCGTGGTCCTTGTGGGCGTCGGGGACAATC +
Preference number: 6 (lower is better)
Translates to: PQAQSWALSERH*RAWSLWASGTI
Trigger: GATTGTCCCCGACGCCCACAAGGACCACGCCCTCAAGTGGCGCTCGGACAGTGCCCAAGACTGAGCCTGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS GCA 72 bp GCCACTGCCCCTGCCTGCAGCTGCTGGTTCAGGTCCTaGTCAATCAGCCACAGGTCTTCGGCACCTAGCGGG +
Preference number: 6 (lower is better)
Translates to: ATAPACSCWFRS*SISHRSSAPSG
Trigger: CCCGCTAGGTGCCGAAGACCTGTGGCTGATTGAGCAGGACCTGAACCAGCAGCTGCAGGCAGGGGCAGTGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS GCA 72 bp CCTCTCCCTTCTCCGGGGCCACCTCCCACTGTGTGCTaGTGGACTGGGGGTTCACAGTCACCACTACCTGGG +
Preference number: 6 (lower is better)
Translates to: PLPSPGPPPTVC*WTGGSQSPLPG
Trigger: CCCAGGTAGTGGTGACTGTGAACCCCCAGTCCAGCAGCACACAGTGGGAGGTGGCCCCGGAGAAGGGAGAGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS CCA 72 bp TCCAGGCTGCAGCGGGACAGTGCCAGGGTCCGGCTCTaGAACGTCCTCATCTCCTCAGGGTCTCCAGGGATC +
Preference number: 6 (lower is better)
Translates to: SRLQRDSARVRL*NVLISSGSPGI
Trigger: GATCCCTGGAGACCCTGAGGAGATGAGGACGTTCCAGAGCCGGACCCTGGCACTGTCCCGCTGCAGCCTGGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS CCA 72 bp TATCCAAGATGCCCTCTCGCACTGTGTCGTAGGCCTTaGCCACACCCTCCCGCAGGTCGGCAGGCTGCTGGC +
Preference number: 6 (lower is better)
Translates to: YPRCPLALCRRP*PHPPAGRQAAG
Trigger: GCCAGCAGCCTGCCGACCTGCGGGAGGGTGTGGCCAAGGCCTACGACACAGTGCGAGAGGGCATCTTGGATA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS CCA 72 bp CAGTCTTGGGCACTGTCCGAGCGCCACTTGAGGGCGTaGTCCTTGTGGGCGTCGGGGACAATCTGGTTGCGC +
Preference number: 6 (lower is better)
Translates to: QSWALSERHLRA*SLWASGTIWLR
Trigger: GCGCAACCAGATTGTCCCCGACGCCCACAAGGACCACGCCCTCAAGTGGCGCTCGGACAGTGCCCAAGACTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS CCA 72 bp TCCACCCTGCCTCTTCCCAGGAACCTAGGCTGCGGGTaGGGACCATCCAGCAGCCCCCACTCCCCATCTTCA +
Preference number: 6 (lower is better)
Translates to: STLPLPRNLGCG*GPSSSPHSPSS
Trigger: TGAAGATGGGGAGTGGGGGCTGCTGGATGGTCCCCACCCGCAGCCTAGGTTCCTGGGAAGAGGCAGGGTGGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461701.5
CDS CCA 72 bp TTCTTGGGGCCTCGGCCACTCTGGGCCTGTATCACCTaGCCTCTGGACACCAGTCCGGGCTCACGATGCAGC +
Preference number: 6 (lower is better)
Translates to: FLGPRPLWACIT*PLDTSPGSRCS
Trigger: GCTGCATCGTGAGCCCGGACTGGTGTCCAGAGGCCAGGTGATACAGGCCCAGAGTGGCCGAGGCCCCAAGAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461701.5
CDS GCA 72 bp TCCGGTAGCCCATCCCGCAGACACTCCTGGGCCAGCTaGAGGCTTGTGGTCATGCATGAGGCCCAGCTCTGT +
Preference number: 6 (lower is better)
Translates to: SGSPSRRHSWAS*RLVVMHEAQLC
Trigger: ACAGAGCTGGGCCTCATGCATGACCACAAGCCTGCAGCTGGCCCAGGAGTGTCTGCGGGATGGGCTACCGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000461701.5
CDS GCA 72 bp ACTGGGCAGGATCACTTCCAGGCTGCAGCGGGACAGTaGCAGGGTCCGGCTCTGGAACGTCCTCATCTCCTC +
Preference number: 6 (lower is better)
Translates to: TGQDHFQAAAGQ*QGPALERPHLL
Trigger: GAGGAGATGAGGACGTTCCAGAGCCGGACCCTGGCACTGTCCCGCTGCAGCCTGGAAGTGATCCTGCCCAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS GCA 72 bp TGGCCACAGTACTGGGAGACGCTGAAGAGGGTACCGTaGTCCATGTCCAGCACCAGCTCCCCGTGCACAGCC +
Preference number: 6 (lower is better)
Translates to: WPQYWETLKRVP*SMSSTSSPCTA
Trigger: GGCTGTGCACGGGGAGCTGGTGCTGGACATGGAGCACGGTACCCTCTTCAGCGTCTCCCAGTACTGTGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS GCA 72 bp CTCGGGGCGGGATGCCCAGGCCGGGAGCATCAAGGATaGAGAACTCATCACTGTCCAGGGTGTCTCCATCGC +
Preference number: 6 (lower is better)
Translates to: LGAGCPGREHQG*RTHHCPGCLHR
Trigger: GCGATGGAGACACCCTGGACAGTGATGAGTTCTGCATCCTTGATGCTCCCGGCCTGGGCATCCCGCCCCGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS GCA 72 bp GCACTGGGAAATGGGCAGGTGCCCGCAGCAAGTCCGTaGTGCCGATCGGCCGTGAGAAGTAACCGTCCCTCA +
Preference number: 6 (lower is better)
Translates to: ALGNGQVPAASP*CRSAVRSNRPS
Trigger: TGAGGGACGGTTACTTCTCACGGCCGATCGGCAGCACGGACTTGCTGCGGGCACCTGCCCATTTCCCAGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS CCA 72 bp CATCCCGCAGACACTCCTGGGCCAGCTGCAGGCTTGTaGTCATGCATGAGGCCCAGCTCTGTGAGTCGGCAG +
Preference number: 6 (lower is better)
Translates to: HPADTPGPAAGL*SCMRPSSVSRQ
Trigger: CTGCCGACTCACAGAGCTGGGCCTCATGCATGACCACAAGCCTGCAGCTGGCCCAGGAGTGTCTGCGGGATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000461701.5
CDS CCA 72 bp AAGTTGGCCAGGTCCAGGGCCAGTTCTGAGTGGCAATaGCAGGCAACTGAGCGCCGGGGTCGGCTCTTAGGC +
Preference number: 6 (lower is better)
Translates to: KLARSRASSEWQ*QATERRGRLLG
Trigger: GCCTAAGAGCCGACCCCGGCGCTCAGTTGCCTGCCATTGCCACTCAGAACTGGCCCTGGACCTGGCCAACTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS CCA 72 bp GCCTGTGGGCCACCTGATGCCCCCACTGAGAAGAAGTaGGCATCCTCGTCATCCGAGTCCGAGTCTGGGGTG +
Preference number: 6 (lower is better)
Translates to: ACGPPDAPTEKK*ASSSSESESGV
Trigger: CACCCCAGACTCGGACTCGGATGACGAGGATGCCCACTTCTTCTCAGTGGGGGCATCAGGTGGCCCACAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS CCA 72 bp CCCCACTCCGTTCACCTGGGAATAGGTAGACGGAGATaGGCGACGCCTGAGGGAGGTGGCCACCTGAAGGCT +
Preference number: 6 (lower is better)
Translates to: PHSVHLGIGRRR*ATPEGGGHLKA
Trigger: AGCCTTCAGGTGGCCACCTCCCTCAGGCGTCGCCCATCTCCGTCTACCTATTCCCAGGTGAACGGAGTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS CAA 90 bp ATCAGCCACAGGTCTTCGGCACCTAGCGGGCGGCTCTTGTTCAGCTaGTCAGCCAGGCCCTCGTGGTCTGTAAGGCTCACGGCGCTGAGC +
Preference number: 6 (lower is better)
Translates to: ISHRSSAPSGRLLFS*SARPSWSVRLTALS
Trigger: GCTCAGCGCCGTGAGCCTTACAGACCACGAGGGCCTGGCTGACAAGCTGAACAAGAGCCGCCCGCTAGGTGCCGAAGACCTGTGGCTGAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS CAA 90 bp GCACGTCGCGGCATCCGCTCACTCGTGTGTAGGTACAGGAACTTGTaGATCTGGGAGGAGGCGAGCCGGTCTCGGACCTCCAGCTCCTGC +
Preference number: 6 (lower is better)
Translates to: ARRGIRSLVCRYRNL*IWEEASRSRTSSSC
Trigger: GCAGGAGCTGGAGGTCCGAGACCGGCTCGCCTCCTCCCAGATCAACAAGTTCCTGTACCTACACACGAGTGAGCGGATGCCGCGACGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS CAA 90 bp TGGGCACGTCGCGGCATCCGCTCACTCGTGTGTAGGTACAGGAACTaGTTGATCTGGGAGGAGGCGAGCCGGTCTCGGACCTCCAGCTCC +
Preference number: 6 (lower is better)
Translates to: WARRGIRSLVCRYRN*LIWEEASRSRTSSS
Trigger: GGAGCTGGAGGTCCGAGACCGGCTCGCCTCCTCCCAGATCAACAAGTTCCTGTACCTACACACGAGTGAGCGGATGCCGCGACGTGCCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS CAA 90 bp ACAGTCACCACTACCTGGGGCAGGAAGTACTTGCGCCCAGTGCTCTaGGGGTCCAGGGCTTTGGAGACACGCAGGCAAGGGACAGGTGGC +
Preference number: 6 (lower is better)
Translates to: TVTTTWGRKYLRPVL*GSRALETRRQGTGG
Trigger: GCCACCTGTCCCTTGCCTGCGTGTCTCCAAAGCCCTGGACCCCAAGAGCACTGGGCGCAAGTACTTCCTGCCCCAGGTAGTGGTGACTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS CAA 90 bp AGCCCGTGCCTGCAACAGAGCCGCTTTAGCTTCAGCTCGGAGCAGTaGAGTTGGGCCAGGCCGATGAGGAGGCCAGCAAAAGTGCCCACC +
Preference number: 6 (lower is better)
Translates to: SPCLQQSRFSFSSEQ*SWARPMRRPAKVPT
Trigger: GGTGGGCACTTTTGCTGGCCTCCTCATCGGCCTGGCCCAACTCAACTGCTCCGAGCTGAAGCTAAAGCGGCTCTGTTGCAGGCACGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS CAA 90 bp CGATGGAGCCCACGAAGCCTTCCACCAGCTCCAGCGGTGACTCCATaGACTCCAGCACCTCGTTCACAGACTTCCTGGACTCGGGCCTGG +
Preference number: 6 (lower is better)
Translates to: RWSPRSLPPAPAVTP*TPAPRSQTSWTRAW
Trigger: CCAGGCCCGAGTCCAGGAAGTCTGTGAACGAGGTGCTGGAGTCAATGGAGTCACCGCTGGAGCTGGTGGAAGGCTTCGTGGGCTCCATCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461701.5
ENST00000461955.1
CDS CAA 90 bp AGGGGAGGCAGAATTTCCCATCTGGGCACCAGGGTGGCCGTGCCGTaGTCTGGAGCCCCTGTTCTGTGTGCCACTGAAGGGCAGGAGACA +
Preference number: 6 (lower is better)
Translates to: RGGRISHLGTRVAVP*SGAPVLCATEGQET
Trigger: TGTCTCCTGCCCTTCAGTGGCACACAGAACAGGGGCTCCAGACAACGGCACGGCCACCCTGGTGCCCAGATGGGAAATTCTGCCTCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461701.5
CDS CAA 90 bp CACCCGTGCCTGCAACAGAGCCGCTTTAGCTTCAGCTCGGAGCAGTaGAGTTGGGCCAGGCCGATGAGGAGGCCAGCAAAAGTGCCCACC +
Preference number: 6 (lower is better)
Translates to: HPCLQQSRFSFSSEQ*SWARPMRRPAKVPT
Trigger: GGTGGGCACTTTTGCTGGCCTCCTCATCGGCCTGGCCCAACTCAACTGCTCCGAGCTGAAGCTAAAGCGGCTCTGTTGCAGGCACGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472525.1
CDS TCA 72 bp TCGTGGTCTGTAAGGCTCACGGCGCTGAGCAGTTCCTaGAGTTGCTGGAGCTGCCTCGGGGTCAGGAGCAGG +
Preference number: 6 (lower is better)
Translates to: SWSVRLTALSSS*SCWSCLGVRSR
Trigger: CCTGCTCCTGACCCCGAGGCAGCTCCAGCAACTTCAGGAACTGCTCAGCGCCGTGAGCCTTACAGACCACGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS GCA 72 bp TCGACGGCCACACCACGTTCCCCATCACCCGGAGAGTaGTCCACCCTCACGACAGTGTCCAGGAAGGTCACT +
Preference number: 6 (lower is better)
Translates to: STATPRSPSPGE*STLTTVSRKVT
Trigger: AGTGACCTTCCTGGACACTGTCGTGAGGGTGGAGCACTCTCCGGGTGATGGGGAACGTGGTGTGGCCGTCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000461701.5
CDS GCA 72 bp TCACCACTACCTGGGGCAGGAAGTACTTGCGCCCAGTaGTCTTGGGGTCCAGGGCTTTGGAGACACGCAGGC +
Preference number: 6 (lower is better)
Translates to: SPLPGAGSTCAQ*SWGPGLWRHAG
Trigger: GCCTGCGTGTCTCCAAAGCCCTGGACCCCAAGAGCACTGGGCGCAAGTACTTCCTGCCCCAGGTAGTGGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS GCA 72 bp CTGGGAAATGGGCAGGTGCCCGCAGCAAGTCCGTGCTaGCGATCGGCCGTGAGAAGTAACCGTCCCTCACAA +
Preference number: 6 (lower is better)
Translates to: LGNGQVPAASPC*RSAVRSNRPSQ
Trigger: TTGTGAGGGACGGTTACTTCTCACGGCCGATCGGCAGCACGGACTTGCTGCGGGCACCTGCCCATTTCCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS GCA 72 bp GGCGCCCGTCAGCCCCTTCTGCTCATGGCCCCGCGATaGCACGTCACAGATGGTCTGAGCTGTATCCAAGAT +
Preference number: 6 (lower is better)
Translates to: GARQPLLLMAPR*HVTDGLSCIQD
Trigger: ATCTTGGATACAGCTCAGACCATCTGTGACGTGGCATCGCGGGGCCATGAGCAGAAGGGGCTGACGGGCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS GCA 72 bp GAGGCAGAATTTCCCATCTGGGCACCAGGGTGGCCGTaGCGTTGTCTGGAGCCCCTGTTCTGTGTGCCACTG +
Preference number: 6 (lower is better)
Translates to: EAEFPIWAPGWP*RCLEPLFCVPL
Trigger: CAGTGGCACACAGAACAGGGGCTCCAGACAACGGCACGGCCACCCTGGTGCCCAGATGGGAAATTCTGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461701.5
CDS CCA 72 bp AGTACTTGCGCCCAGTGCTCTTGGGGTCCAGGGCTTTaGAGACACGCAGGCAAGGGACAGGTGGCTTCCCTC +
Preference number: 6 (lower is better)
Translates to: STCAQCSWGPGL*RHAGKGQVASL
Trigger: GAGGGAAGCCACCTGTCCCTTGCCTGCGTGTCTCCAAAGCCCTGGACCCCAAGAGCACTGGGCGCAAGTACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS CCA 72 bp CTACCTGGGGCAGGAAGTACTTGCGCCCAGTGCTCTTaGGGTCCAGGGCTTTGGAGACACGCAGGCAAGGGA +
Preference number: 6 (lower is better)
Translates to: LPGAGSTCAQCS*GPGLWRHAGKG
Trigger: TCCCTTGCCTGCGTGTCTCCAAAGCCCTGGACCCCAAGAGCACTGGGCGCAAGTACTTCCTGCCCCAGGTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS CCA 72 bp AGGAAGATCAGGGACCCTGGAGAGAGGCTGGGGTGCTaGGGACTCACCCGTGCCTGCAACAGAGCCGCTTTA +
Preference number: 6 (lower is better)
Translates to: RKIRDPGERLGC*GLTRACNRAAL
Trigger: TAAAGCGGCTCTGTTGCAGGCACGGGTGAGTCCCCAGCACCCCAGCCTCTCTCCAGGGTCCCTGATCTTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472525.1
CDS CAA 72 bp GTCTGTAAGGCTCACGGCGCTGAGCAGTTCCTGAAGTaGCTGGAGCTGCCTCGGGGTCAGGAGCAGGTGCAG +
Preference number: 6 (lower is better)
Translates to: VCKAHGAEQFLK*LELPRGQEQVQ
Trigger: CTGCACCTGCTCCTGACCCCGAGGCAGCTCCAGCAACTTCAGGAACTGCTCAGCGCCGTGAGCCTTACAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS CAA 72 bp AGGTCTTCGGCACCTAGCGGGCGGCTCTTGTTCAGCTaGTCAGCCAGGCCCTCGTGGTCTGTAAGGCTCACG +
Preference number: 6 (lower is better)
Translates to: RSSAPSGRLLFS*SARPSWSVRLT
Trigger: CGTGAGCCTTACAGACCACGAGGGCCTGGCTGACAAGCTGAACAAGAGCCGCCCGCTAGGTGCCGAAGACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS CAA 72 bp ACTACCTGGGGCAGGAAGTACTTGCGCCCAGTGCTCTaGGGGTCCAGGGCTTTGGAGACACGCAGGCAAGGG +
Preference number: 6 (lower is better)
Translates to: TTWGRKYLRPVL*GSRALETRRQG
Trigger: CCCTTGCCTGCGTGTCTCCAAAGCCCTGGACCCCAAGAGCACTGGGCGCAAGTACTTCCTGCCCCAGGTAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS CAA 72 bp CGCGGCATCCGCTCACTCGTGTGTAGGTACAGGAACTaGTTGATCTGGGAGGAGGCGAGCCGGTCTCGGACC +
Preference number: 6 (lower is better)
Translates to: RGIRSLVCRYRN*LIWEEASRSRT
Trigger: GGTCCGAGACCGGCTCGCCTCCTCCCAGATCAACAAGTTCCTGTACCTACACACGAGTGAGCGGATGCCGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS CAA 90 bp TCCTGCTCAATCAGCCACAGGTCTTCGGCACCTAGCGGGCGGCTCTaGTTCAGCTTGTCAGCCAGGCCCTCGTGGTCTGTAAGGCTCACG +
Preference number: 6 (lower is better)
Translates to: SCSISHRSSAPSGRL*FSLSARPSWSVRLT
Trigger: CGTGAGCCTTACAGACCACGAGGGCCTGGCTGACAAGCTGAACAAGAGCCGCCCGCTAGGTGCCGAAGACCTGTGGCTGATTGAGCAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS CAA 90 bp AGGGGCATCAGCGAGACGCGGAGACAGCACTCAGGCCCACCCAGGTaGGTAGTGGGGGCCACATGCAGCGCTTTGATGGTGAGCATGTTA +
Preference number: 6 (lower is better)
Translates to: RGISETRRQHSGPPR*VVGATCSALMVSML
Trigger: TAACATGCTCACCATCAAAGCGCTGCATGTGGCCCCCACTACCAACCTGGGTGGGCCTGAGTGCTGTCTCCGCGTCTCGCTGATGCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS TCA 72 bp CTACAGGGACAGGCCCTCTGGAAGCGTGGTCGAAGGTaGTGGAAGTCTCGGGAACCGAAGGGCCCATCCTTG +
Preference number: 6 (lower is better)
Translates to: LQGQALWKRGRR*WKSREPKGPSL
Trigger: CAAGGATGGGCCCTTCGGTTCCCGAGACTTCCATCACCTTCGACCACGCTTCCAGAGGGCCTGTCCCTGTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS TCA 72 bp AGCCAAGTCCTGGCTGGCCACAGTACTGGGAGACGCTaGAGAGGGTACCGTGCTCCATGTCCAGCACCAGCT +
Preference number: 6 (lower is better)
Translates to: SQVLAGHSTGRR*RGYRAPCPAPA
Trigger: AGCTGGTGCTGGACATGGAGCACGGTACCCTCTTCAGCGTCTCCCAGTACTGTGGCCAGCCAGGACTTGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS CCA 72 bp CCGAACATGGCTACAGGGACAGGCCCTCTGGAAGCGTaGTCGAAGGTGATGGAAGTCTCGGGAACCGAAGGG +
Preference number: 6 (lower is better)
Translates to: PNMATGTGPLEA*SKVMEVSGTEG
Trigger: CCCTTCGGTTCCCGAGACTTCCATCACCTTCGACCACGCTTCCAGAGGGCCTGTCCCTGTAGCCATGTTCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS CCA 72 bp AGCTCTGCTCGGGCAGGGCCATGTAGTGGCGCAAGGTaGCTTTGTGCAACCGCAGTGTCACCAGGAACTCCT +
Preference number: 6 (lower is better)
Translates to: SSARAGPCSGAR*LCATAVSPGTP
Trigger: AGGAGTTCCTGGTGACACTGCGGTTGCACAAAGCCACCTTGCGCCACTACATGGCCCTGCCCGAGCAGAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS CCA 72 bp TGGACTCGGGCCTGGCTCCTCACCCAGATTTCCAGGTaGATGTCTCGCAGGGCAACGCTGCCCTTGTACAGA +
Preference number: 6 (lower is better)
Translates to: WTRAWLLTQISR*MSRRATLPLYR
Trigger: TCTGTACAAGGGCAGCGTTGCCCTGCGAGACATCCACCTGGAAATCTGGGTGAGGAGCCAGGCCCGAGTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461701.5
ENST00000461955.1
CDS CCA 72 bp CCAGCACCTCGTTCACAGACTTCCTGGACTCGGGCCTaGCTCCTCACCCAGATTTCCAGGTGGATGTCTCGC +
Preference number: 6 (lower is better)
Translates to: PAPRSQTSWTRA*LLTQISRWMSR
Trigger: GCGAGACATCCACCTGGAAATCTGGGTGAGGAGCCAGGCCCGAGTCCAGGAAGTCTGTGAACGAGGTGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461701.5
ENST00000461955.1
CDS CCA 72 bp CAGCATCTAACTTGGTTCTTGGGGCCTCGGCCACTCTaGGCCTGTATCACCTGGCCTCTGGACACCAGTCCG +
Preference number: 6 (lower is better)
Translates to: QHLTWFLGPRPL*ACITWPLDTSP
Trigger: CGGACTGGTGTCCAGAGGCCAGGTGATACAGGCCCAGAGTGGCCGAGGCCCCAAGAACCAAGTTAGATGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461701.5
CDS CCA 72 bp GCCAGCCCTTGCTCCTCAGACCCTCAGCATCTAACTTaGTTCTTGGGGCCTCGGCCACTCTGGGCCTGTATC +
Preference number: 6 (lower is better)
Translates to: ASPCSSDPQHLT*FLGPRPLWACI
Trigger: GATACAGGCCCAGAGTGGCCGAGGCCCCAAGAACCAAGTTAGATGCTGAGGGTCTGAGGAGCAAGGGCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461701.5
CDS CAA 72 bp ATCAGCCACAGGTCTTCGGCACCTAGCGGGCGGCTCTaGTTCAGCTTGTCAGCCAGGCCCTCGTGGTCTGTA +
Preference number: 6 (lower is better)
Translates to: ISHRSSAPSGRL*FSLSARPSWSV
Trigger: TACAGACCACGAGGGCCTGGCTGACAAGCTGAACAAGAGCCGCCCGCTAGGTGCCGAAGACCTGTGGCTGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS CAA 72 bp GGCATCCGCTCACTCGTGTGTAGGTACAGGAACTTGTaGATCTGGGAGGAGGCGAGCCGGTCTCGGACCTCC +
Preference number: 6 (lower is better)
Translates to: GIRSLVCRYRNL*IWEEASRSRTS
Trigger: GGAGGTCCGAGACCGGCTCGCCTCCTCCCAGATCAACAAGTTCCTGTACCTACACACGAGTGAGCGGATGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS CAA 72 bp GTCTCAGCTGTGGCCTGGATAGCCTGTACCAACCGGTaGCTGAGTTCCAGGGCGGCAGAGGCTGTGGATGAG +
Preference number: 6 (lower is better)
Translates to: VSAVAWIACTNR*LSSRAAEAVDE
Trigger: CTCATCCACAGCCTCTGCCGCCCTGGAACTCAGCAACCGGTTGGTACAGGCTATCCAGGCCACAGCTGAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS CAA 90 bp AGTAGTGGTGCAGCAAGTAGCGGCAGACCCGCTCTTTCACACAGTTaGACCATGGCCACAGCCATCGTGACATCTCGGAGACCGCCGGGC +
Preference number: 6 (lower is better)
Translates to: SSGAASSGRPALSHS*TMATAIVTSRRPPG
Trigger: GCCCGGCGGTCTCCGAGATGTCACGATGGCTGTGGCCATGGTCAAACTGTGTGAAAGAGCGGGTCTGCCGCTACTTGCTGCACCACTACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377264.8
ENST00000421419.3
ENST00000461701.5
ENST00000461955.1
CDS CAA 90 bp AGCAGGGCACAGGAGTCGGCACAGCTGTGCACGTGTACCACATTGTaGGAGCAGCGCAGCTCGAATAGTGGCTGGCTCAGTTTGCCCTCG +
Preference number: 6 (lower is better)
Translates to: SRAQESAQLCTCTTL*EQRSSNSGWLSLPS
Trigger: CGAGGGCAAACTGAGCCAGCCACTATTCGAGCTGCGCTGCTCCAACAATGTGGTACACGTGCACAGCTGTGCCGACTCCTGTGCCCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS CAA 90 bp ACCAGCAGGGCACAGGAGTCGGCACAGCTGTGCACGTGTACCACATaGTTGGAGCAGCGCAGCTCGAATAGTGGCTGGCTCAGTTTGCCC +
Preference number: 6 (lower is better)
Translates to: TSRAQESAQLCTCTT*LEQRSSNSGWLSLP
Trigger: GGGCAAACTGAGCCAGCCACTATTCGAGCTGCGCTGCTCCAACAATGTGGTACACGTGCACAGCTGTGCCGACTCCTGTGCCCTGCTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS TCA 72 bp GCAGATCGCCTGTGCTCATTACGTACTGGAGCAGGTTaGCCAGCAGGGCACAGGAGTCGGCACAGCTGTGCA +
Preference number: 6 (lower is better)
Translates to: ADRLCSLRTGAG*PAGHRSRHSCA
Trigger: TGCACAGCTGTGCCGACTCCTGTGCCCTGCTGGTCAACCTGCTCCAGTACGTAATGAGCACAGGCGATCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS TCA 72 bp GCATCCGCTCACTCGTGTGTAGGTACAGGAACTTGTTaGTCTGGGAGGAGGCGAGCCGGTCTCGGACCTCCA +
Preference number: 6 (lower is better)
Translates to: ASAHSCVGTGTC*SGRRRAGLGPP
Trigger: TGGAGGTCCGAGACCGGCTCGCCTCCTCCCAGATCAACAAGTTCCTGTACCTACACACGAGTGAGCGGATGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS TCA 72 bp TGCTCATGGCCCCGCGATGCCACGTCACAGATGGTCTaGGCTGTATCCAAGATGCCCTCTCGCACTGTGTCG +
Preference number: 6 (lower is better)
Translates to: CSWPRDATSQMV*AVSKMPSRTVS
Trigger: CGACACAGTGCGAGAGGGCATCTTGGATACAGCTCAGACCATCTGTGACGTGGCATCGCGGGGCCATGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS GCA 72 bp GGCCCATCCTTGGTGGCATCAAACTCGGTGAAAAAGTaGGTGGCGAGGTCAGGTGGTCCGGAAGATGGGGCA +
Preference number: 6 (lower is better)
Translates to: GPSLVASNSVKK*VARSGGPEDGA
Trigger: TGCCCCATCTTCCGGACCACCTGACCTCGCCACGCACTTTTTCACCGAGTTTGATGCCACCAAGGATGGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS GCA 72 bp CACTCAGGCCCACCCAGGTTGGTAGTGGGGGCCACATaGAGCGCTTTGATGGTGAGCATGTTAGAGTGGGCA +
Preference number: 6 (lower is better)
Translates to: HSGPPRLVVGAT*SALMVSMLEWA
Trigger: TGCCCACTCTAACATGCTCACCATCAAAGCGCTGCATGTGGCCCCCACTACCAACCTGGGTGGGCCTGAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS CCA 72 bp GAAAAAGTGCGTGGCGAGGTCAGGTGGTCCGGAAGATaGGGCAGACGTCTGAAGCAAGGTCAGGGTCACACC +
Preference number: 6 (lower is better)
Translates to: EKVRGEVRWSGR*GRRLKQGQGHT
Trigger: GGTGTGACCCTGACCTTGCTTCAGACGTCTGCCCCATCTTCCGGACCACCTGACCTCGCCACGCACTTTTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS CCA 72 bp CCTTCTGCTCATGGCCCCGCGATGCCACGTCACAGATaGTCTGAGCTGTATCCAAGATGCCCTCTCGCACTG +
Preference number: 6 (lower is better)
Translates to: PSAHGPAMPRHR*SELYPRCPLAL
Trigger: CAGTGCGAGAGGGCATCTTGGATACAGCTCAGACCATCTGTGACGTGGCATCGCGGGGCCATGAGCAGAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000421419.3
CDS CAA 72 bp GCACAGGAGTCGGCACAGCTGTGCACGTGTACCACATaGTTGGAGCAGCGCAGCTCGAATAGTGGCTGGCTC +
Preference number: 6 (lower is better)
Translates to: AQESAQLCTCTT*LEQRSSNSGWL
Trigger: GAGCCAGCCACTATTCGAGCTGCGCTGCTCCAACAATGTGGTACACGTGCACAGCTGTGCCGACTCCTGTGC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS CAA 72 bp TGCAGATCGCCTGTGCTCATTACGTACTGGAGCAGGTaGACCAGCAGGGCACAGGAGTCGGCACAGCTGTGC +
Preference number: 6 (lower is better)
Translates to: CRSPVLITYWSR*TSRAQESAQLC
Trigger: GCACAGCTGTGCCGACTCCTGTGCCCTGCTGGTCAACCTGCTCCAGTACGTAATGAGCACAGGCGATCTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS CAA 72 bp CCTTGCTCCTCAGACCCTCAGCATCTAACTTGGTTCTaGGGGCCTCGGCCACTCTGGGCCTGTATCACCTGG +
Preference number: 6 (lower is better)
Translates to: PCSSDPQHLTWF*GPRPLWACITW
Trigger: CCAGGTGATACAGGCCCAGAGTGGCCGAGGCCCCAAGAACCAAGTTAGATGCTGAGGGTCTGAGGAGCAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461701.5
CDS CAA 90 bp CGATGGAGCCCACGAAGCCTTCCACCAGCTCCAGCGGTGACTCCATaGACTCCAGCACCTCGTTCACAGACCAGATTTCCAGGTGGATGT +
Preference number: 6 (lower is better)
Translates to: RWSPRSLPPAPAVTP*TPAPRSQTRFPGGC
Trigger: ACATCCACCTGGAAATCTGGTCTGTGAACGAGGTGCTGGAGTCAATGGAGTCACCGCTGGAGCTGGTGGAAGGCTTCGTGGGCTCCATCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000421419.3
CDS TCA 72 bp AACCGAAGGGCCCATCCTTGGTGGCATCAAACTCGGTaGAAAAGTGCGTGGCGAGGTCAGGTGGTCCGGAAG +
Preference number: 6 (lower is better)
Translates to: NRRAHPWWHQTR*KSAWRGQVVRK
Trigger: CTTCCGGACCACCTGACCTCGCCACGCACTTTTTCACCGAGTTTGATGCCACCAAGGATGGGCCCTTCGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS CCA 72 bp ACCAGGAACTCCTTCACATTCTTGTGGGGGTCCAGGTaGATGCGCACAGCAGTGGACAACATGTGGGGTCCC +
Preference number: 6 (lower is better)
Translates to: TRNSFTFLWGSR*MRTAVDNMWGP
Trigger: GGGACCCCACATGTTGTCCACTGCTGTGCGCATCCACCTGGACCCCCACAAGAATGTGAAGGAGTTCCTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS CCA 72 bp GAGAGTGAAGGTCTCCGCGGTGATGAGGACACGCACTaGGAGGTAGAGTGGCCTATAGTCCACAGAGCAGGA +
Preference number: 6 (lower is better)
Translates to: ESEGLRGDEDTH*EVEWPIVHRAG
Trigger: TCCTGCTCTGTGGACTATAGGCCACTCTACCTCCCAGTGCGTGTCCTCATCACCGCGGAGACCTTCACTCTC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS CAA 72 bp CAGGAGTCGGCACAGCTGTGCACGTGTACCACATTGTaGGAGCAGCGCAGCTCGAATAGTGGCTGGCTCAGT +
Preference number: 6 (lower is better)
Translates to: QESAQLCTCTTL*EQRSSNSGWLS
Trigger: ACTGAGCCAGCCACTATTCGAGCTGCGCTGCTCCAACAATGTGGTACACGTGCACAGCTGTGCCGACTCCTG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS CAA 72 bp CTGCAACAGAGCCGCTTTAGCTTCAGCTCGGAGCAGTaGAGTTGGGCCAGGCCGATGAGGAGGCCAGCAAAA +
Preference number: 6 (lower is better)
Translates to: LQQSRFSFSSEQ*SWARPMRRPAK
Trigger: TTTTGCTGGCCTCCTCATCGGCCTGGCCCAACTCAACTGCTCCGAGCTGAAGCTAAAGCGGCTCTGTTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377264.8
ENST00000418259.5
ENST00000472525.1
CDS GCA 72 bp CGGGTAGTCATCCACGGCCGCTCGGTGGTAGAGTGTTaGCTTTTCAGCTTCCAGACAGAAGTAGCCAAGTCC +
Preference number: 6 (lower is better)
Translates to: RVVIHGRSVVEC*LFSFQTEVAKS
Trigger: GGACTTGGCTACTTCTGTCTGGAAGCTGAAAAGGCAACACTCTACCACCGAGCGGCCGTGGATGACTACCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS CCA 72 bp GAAGAAGTGGGCATCCTCGTCATCCGAGTCCGAGTCTaGGGTGAGATCAAAGCAGTTGGCCAGCTTGAAGGC +
Preference number: 6 (lower is better)
Translates to: EEVGILVIRVRV*GEIKAVGQLEG
Trigger: GCCTTCAAGCTGGCCAACTGCTTTGATCTCACCCCAGACTCGGACTCGGATGACGAGGATGCCCACTTCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS CCA 72 bp AGGAGTCGGCACAGCTGTGCACGTGTACCACATTGTTaGAGCAGCGCAGCTCGAATAGTGGCTGGCTCAGTT +
Preference number: 6 (lower is better)
Translates to: RSRHSCARVPHC*SSAARIVAGSV
Trigger: AACTGAGCCAGCCACTATTCGAGCTGCGCTGCTCCAACAATGTGGTACACGTGCACAGCTGTGCCGACTCCT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS CAA 72 bp GCAGCAAGTAGCGGCAGACCCGCTCTTTCACACAGTTaGACCATGGCCACAGCCATCGTGACATCTCGGAGA +
Preference number: 6 (lower is better)
Translates to: AASSGRPALSHS*TMATAIVTSRR
Trigger: TCTCCGAGATGTCACGATGGCTGTGGCCATGGTCAAACTGTGTGAAAGAGCGGGTCTGCCGCTACTTGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377264.8
ENST00000421419.3
ENST00000461701.5
ENST00000461955.1
CDS CAA 90 bp TCGAGGATGAACCTGAGCAGGAAGGTGGAGGTGTCCATGATGATGTaGCTGGAGAGAGTGAAGGTCTCCGCGGTGATGAGGACACGCACT +
Preference number: 6 (lower is better)
Translates to: SRMNLSRKVEVSMMM*LERVKVSAVMRTRT
Trigger: AGTGCGTGTCCTCATCACCGCGGAGACCTTCACTCTCTCCAGCAACATCATCATGGACACCTCCACCTTCCTGCTCAGGTTCATCCTCGA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS GCA 72 bp GCCACCTCCAACTTGGGGCCAGGGAAGGCCTCATTTTaGTTCAACTTCACCATCAGCTCCATGTACCCTGAG +
Preference number: 6 (lower is better)
Translates to: ATSNLGPGKASF*FNFTISSMYPE
Trigger: CTCAGGGTACATGGAGCTGATGGTGAAGTTGAAGCAAAATGAGGCCTTCCCTGGCCCCAAGTTGGAGGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS CCA 72 bp ATCAAACTCGGTGAAAAAGTGCGTGGCGAGGTCAGGTaGTCCGGAAGATGGGGCAGACGTCTGAAGCAAGGT +
Preference number: 6 (lower is better)
Translates to: IKLGEKVRGEVR*SGRWGRRLKQG
Trigger: ACCTTGCTTCAGACGTCTGCCCCATCTTCCGGACCACCTGACCTCGCCACGCACTTTTTCACCGAGTTTGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS CCA 72 bp TGCCTTTTCAGCTTCCAGACAGAAGTAGCCAAGTCCTaGCTGGCCACAGTACTGGGAGACGCTGAAGAGGGT +
Preference number: 6 (lower is better)
Translates to: CLFSFQTEVAKS*LATVLGDAEEG
Trigger: ACCCTCTTCAGCGTCTCCCAGTACTGTGGCCAGCCAGGACTTGGCTACTTCTGTCTGGAAGCTGAAAAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS CAA 72 bp AACCTGAGCAGGAAGGTGGAGGTGTCCATGATGATGTaGCTGGAGAGAGTGAAGGTCTCCGCGGTGATGAGG +
Preference number: 6 (lower is better)
Translates to: NLSRKVEVSMMM*LERVKVSAVMR
Trigger: CCTCATCACCGCGGAGACCTTCACTCTCTCCAGCAACATCATCATGGACACCTCCACCTTCCTGCTCAGGTT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS TCA 72 bp TGGGGTGAGATCAAAGCAGTTGGCCAGCTTGAAGGCTaGCTTGCACATCTTAAAGCTGTCGTGCCAGAAGCC +
Preference number: 6 (lower is better)
Translates to: WGEIKAVGQLEG*LAHLKAVVPEA
Trigger: GGCTTCTGGCACGACAGCTTTAAGATGTGCAAGTCAGCCTTCAAGCTGGCCAACTGCTTTGATCTCACCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5
CDS CAA 72 bp GTGAGATCAAAGCAGTTGGCCAGCTTGAAGGCTGACTaGCACATCTTAAAGCTGTCGTGCCAGAAGCCTGAG +
Preference number: 6 (lower is better)
Translates to: VRSKQLASLKAD*HILKLSCQKPE
Trigger: CTCAGGCTTCTGGCACGACAGCTTTAAGATGTGCAAGTCAGCCTTCAAGCTGGCCAACTGCTTTGATCTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377264.8
ENST00000418259.5