Pregenerated sensors for ATG101 (Homo sapiens)
Ensembl gene IDs: ENSG00000123395Ensembl transcript IDs: ENST00000336854.8, ENST00000336854.9, ENST00000547409.1, ENST00000548915.1, ENST00000550604.1, ENST00000552544.5, ENST00000552947.1, ENST00000553049.5
Found 82 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCACCAATGACCCAGAGCAGGTTCCAGAGCCCAAAGGCCCAAAAGTaGAATTCCCAAAAGCCAAGGTCTGGGAGCCATCAAGGAGCTCCC | + |
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Preference number: 1 (lower is better) Translates to: SPMTQSRFQSPKAQK*NSQKPRSGSHQGAP Trigger: GGGAGCTCCTTGATGGCTCCCAGACCTTGGCTTTTGGGAATTGCACTTTTGGGCCTTTGGGCTCTGGAACCTGCTCTGGGTCATTGGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000336854.8 |
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| 3UTR CCA 90 bp | GCTCTTCTGTACAGTGGAGAAAGAAGGGGGACCCCACCAGGGCTATaGAGAGACAGTAGAGGCAGGACTGAACCGTCAGCAAAGATTAAA | + |
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Preference number: 1 (lower is better) Translates to: ALLYSGERRGTPPGL*RDSRGRTEPSAKIK Trigger: TTTAATCTTTGCTGACGGTTCAGTCCTGCCTCTACTGTCTCTCCATAGCCCTGGTGGGGTCCCCCTTCTTTCTCCACTGTACAGAAGAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000336854.8 |
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| 3UTR-3UTR CCA 90 bp | CACCAGGGCTATGGAGAGACAGTAGAGGCAGGACTGAACCGTCAGCAAAGATTACCAAAAGCCAAGGTCTaGGAGCCATCAAGGAGCTCC | + |
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Preference number: 2 (lower is better) Translates to: HQGYGETVEAGLNRQQRLPKAKV*EPSRSS Trigger: GGAGCTCCTTGATGGCTCCCAGACCTTGGCTTTTGG...TAATCTTTGCTGACGGTTCAGTCCTGCCTCTACTGTCTCTCCATAGCCCTGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000336854.8 |
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| 3UTR-3UTR TCA 90 bp | TGGCTCTTCTGTACAGTGGAGAAAGAAGGGGGACCCCACCAGGGCTATGGAGAGATTAAAAGGATGACCTaGGGCTGGCAACCACAAAAC | + |
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Preference number: 2 (lower is better) Translates to: WLFCTVEKEGGPHQGYGEIKRMT*GWQPQN Trigger: GTTTTGTGGTTGCCAGCCTCAGGTCATCCTTTTAAT...CTCTCCATAGCCCTGGTGGGGTCCCCCTTCTTTCTCCACTGTACAGAAGAGCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000336854.8 |
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| 3UTR GCA 72 bp | GGCTGGCAACCACAAAACCAAGAAGCCAGCGGGGGCTaGCCCTTCCAAGTCTCACCAATGACCCAGAGCAGG | + |
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Preference number: 3 (lower is better) Translates to: GWQPQNQEASGG*PFQVSPMTQSR Trigger: CCTGCTCTGGGTCATTGGTGAGACTTGGAAGGGGCAGCCCCCGCTGGCTTCTTGGTTTTGTGGTTGCCAGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000336854.8 |
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| 3UTR CCA 72 bp | TACAGTGGAGAAAGAAGGGGGACCCCACCAGGGCTATaGAGAGACAGTAGAGGCAGGACTGAACCGTCAGCA | + |
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Preference number: 3 (lower is better) Translates to: YSGERRGTPPGL*RDSRGRTEPSA Trigger: TGCTGACGGTTCAGTCCTGCCTCTACTGTCTCTCCATAGCCCTGGTGGGGTCCCCCTTCTTTCTCCACTGTA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000336854.8 |
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| 3UTR GCA 72 bp | ACCCAGAGCAGGTTCCAGAGCCCAAAGGCCCAAAAGTaGAATTCCCAAAAGCCAAGGTCTGGGAGCCATCAA | + |
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Preference number: 3 (lower is better) Translates to: TQSRFQSPKAQK*NSQKPRSGSHQ Trigger: TTGATGGCTCCCAGACCTTGGCTTTTGGGAATTGCACTTTTGGGCCTTTGGGCTCTGGAACCTGCTCTGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000336854.8 |
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| 3UTR TCA 72 bp | AGGACTGAACCGTCAGCAAAGATTAAAAGGATGACCTaGGGCTGGCAACCACAAAACCAAGAAGCCAGCGGG | + |
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Preference number: 3 (lower is better) Translates to: RTEPSAKIKRMT*GWQPQNQEASG Trigger: CCCGCTGGCTTCTTGGTTTTGTGGTTGCCAGCCTCAGGTCATCCTTTTAATCTTTGCTGACGGTTCAGTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000336854.8 |
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| 3UTR CCA 72 bp | AACTCATGTTCTCAACTTTATTCCCCATCCCAGTGGTaGCTCTTCTGTACAGTGGAGAAAGAAGGGGGACCC | + |
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Preference number: 3 (lower is better) Translates to: NSCSQLYSPSQW*LFCTVEKEGGP Trigger: GGGTCCCCCTTCTTTCTCCACTGTACAGAAGAGCCACCACTGGGATGGGGAATAAAGTTGAGAACATGAGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000336854.8 |
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| CDS GCA 90 bp | CCAGGCTGGCTGGACTCGGAAGCTGGAGGAGCGCCCGCGTTCCACTaGCCCGGGGGATGCCCACGCCGGCACAGGAGAGGGGGCACACGG | + |
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Preference number: 5 (lower is better) Translates to: PGWLDSEAGGAPAFH*PGGCPRRHRRGGTR Trigger: CCGTGTGCCCCCTCTCCTGTGCCGGCGTGGGCATCCCCCGGGGCAGTGGAACGCGGGCGCTCCTCCAGCTTCCGAGTCCAGCCAGCCTGG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENST00000336854.9 ENST00000550604.1 ENST00000552544.5 ENST00000552947.1 |
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| CDS GCA 90 bp | AGCGGAGTCATCGGCGGCGAGCCTGGCCGGGAGACGCTGACGCGGTaGCCAACTCAGTCCGGACTGAGAGGTCTGGAAGGAACACTGATC | + |
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Preference number: 5 (lower is better) Translates to: SGVIGGEPGRETLTR*PTQSGLRGLEGTLI Trigger: GATCAGTGTTCCTTCCAGACCTCTCAGTCCGGACTGAGTTGGGCACCGCGTCAGCGTCTCCCGGCCAGGCTCGCCGCCGATGACTCCGCT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000547409.1 |
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| CDS CCA 90 bp | CGCTGTGGTGTTTCGGCCCGTACAACTCACTTCCGCCATAGAGACTaGAGGGAAGGAGGAGCCCTACGGGCTCTCGGCCGCCTCCCTAGG | + |
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Preference number: 5 (lower is better) Translates to: RCGVSARTTHFRHRD*REGGALRALGRLPR Trigger: CCTAGGGAGGCGGCCGAGAGCCCGTAGGGCTCCTCCTTCCCTCCAGTCTCTATGGCGGAAGTGAGTTGTACGGGCCGAAACACCACAGCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000547409.1 |
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| CDS GCA 90 bp | TCCCGGCAGATCTGCCGCTCCTGCTCCGTGGCCAGGGCTACCACATaGACCTTGACCGTCCACACTTCCCATGGGATGCACTCGTCTGAG | + |
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Preference number: 5 (lower is better) Translates to: SRQICRSCSVARATT*TLTVHTSHGMHSSE Trigger: CTCAGACGAGTGCATCCCATGGGAAGTGTGGACGGTCAAGGTGCATGTGGTAGCCCTGGCCACGGAGCAGGAGCGGCAGATCTGCCGGGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000336854.9 ENST00000553049.5 |
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| CDS GCA 90 bp | TCGCAGAGTTTCTCACCCACCTTCTCCCGGCAGATCTGCCGCTCCTaGTCCGTGGCCAGGGCTACCACATGCACCTTGACCGTCCACACT | + |
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Preference number: 5 (lower is better) Translates to: SQSFSPTFSRQICRS*SVARATTCTLTVHT Trigger: AGTGTGGACGGTCAAGGTGCATGTGGTAGCCCTGGCCACGGAGCAGGAGCGGCAGATCTGCCGGGAGAAGGTGGGTGAGAAACTCTGCGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000336854.9 ENST00000553049.5 |
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| CDS GCA 90 bp | CCACGGTGCCAATGGAGTAGGTGCCCTCCTTCTTGTAGTGGAACTTaGCTGTGCTGCGGTGCAGAAGCACCGTGTGCAGCACAGCCAGCA | + |
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Preference number: 5 (lower is better) Translates to: PRCQWSRCPPSCSGT*LCCGAEAPCAAQPA Trigger: TGCTGGCTGTGCTGCACACGGTGCTTCTGCACCGCAGCACAGGCAAGTTCCACTACAAGAAGGAGGGCACCTACTCCATTGGCACCGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000336854.9 ENST00000548915.1 ENST00000550604.1 ENST00000552544.5 ENST00000553049.5 |
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| CDS GCA 90 bp | ATGATCTTCTCGCAGAGTTTCTCACCCACCTTCTCCCGGCAGATCTaGCGCTCCTGCTCCGTGGCCAGGGCTACCACATGCACCTTGACC | + |
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Preference number: 5 (lower is better) Translates to: MIFSQSFSPTFSRQI*RSCSVARATTCTLT Trigger: GGTCAAGGTGCATGTGGTAGCCCTGGCCACGGAGCAGGAGCGGCAGATCTGCCGGGAGAAGGTGGGTGAGAAACTCTGCGAGAAGATCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000336854.9 ENST00000553049.5 |
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| CDS CCA 90 bp | GGCTGGAGCACAGGGTGCGCCCATTCCCACCTTGAGTGTAGAGTTTaGAGCACGGATTCCTCAAGCTCGGCTCATGCCCTTCCTCCTCCT | + |
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Preference number: 5 (lower is better) Translates to: GWSTGCAHSHLECRV*STDSSSSAHALPPP Trigger: AGGAGGAGGAAGGGCATGAGCCGAGCTTGAGGAATCCGTGCTCCAAACTCTACACTCAAGGTGGGAATGGGCGCACCCTGTGCTCCAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552947.1 |
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| CDS TCA 90 bp | CAGTCCGGACTGAGAGGTCTGGAAGGAACACTGATCACCGCAAGATaGGGGGCGTACCCCGTAGAGAGAGGTCCTGGAGATGAGCCCACA | + |
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Preference number: 5 (lower is better) Translates to: QSGLRGLEGTLITAR*GAYPVERGPGDEPT Trigger: TGTGGGCTCATCTCCAGGACCTCTCTCTACGGGGTACGCCCCTCATCTTGCGGTGATCAGTGTTCCTTCCAGACCTCTCAGTCCGGACTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000547409.1 |
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| CDS GCA 90 bp | CAATGGAGTAGGTGCCCTCCTTCTTGTAGTGGAACTTGCCTGTGCTaGGGTGCAGAAGCACCGTGTGCAGCACAGCCAGCATGGCCTCCT | + |
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Preference number: 5 (lower is better) Translates to: QWSRCPPSCSGTCLC*GAEAPCAAQPAWPP Trigger: AGGAGGCCATGCTGGCTGTGCTGCACACGGTGCTTCTGCACCGCAGCACAGGCAAGTTCCACTACAAGAAGGAGGGCACCTACTCCATTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000336854.9 ENST00000548915.1 ENST00000550604.1 ENST00000552544.5 ENST00000553049.5 |
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| CDS GCA 90 bp | TGCCAATGGAGTAGGTGCCCTCCTTCTTGTAGTGGAACTTGCCTGTaGTGCGGTGCAGAAGCACCGTGTGCAGCACAGCCAGCATGGCCT | + |
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Preference number: 5 (lower is better) Translates to: CQWSRCPPSCSGTCL*CGAEAPCAAQPAWP Trigger: AGGCCATGCTGGCTGTGCTGCACACGGTGCTTCTGCACCGCAGCACAGGCAAGTTCCACTACAAGAAGGAGGGCACCTACTCCATTGGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000336854.9 ENST00000548915.1 ENST00000550604.1 ENST00000552544.5 ENST00000553049.5 |
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| CDS CCA 90 bp | CGGTCTGTGGACCGCACAGAGATCAGGCCAGCTCTGCCTCTCAGCTaGCGATCAGCTCGCGTCTACCTGTACTATCAAGCACCATCACGT | + |
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Preference number: 5 (lower is better) Translates to: RSVDRTEIRPALPLS*RSARVYLYYQAPSR Trigger: ACGTGATGGTGCTTGATAGTACAGGTAGACGCGAGCTGATCGCCAGCTGAGAGGCAGAGCTGGCCTGATCTCTGTGCGGTCCACAGACCG 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552947.1 |
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| CDS GCA 90 bp | ATACAGGGCAACGGTCTGTGGACCGCACAGAGATCAGGCCAGCTCTaGCTCTCAGCTGGCGATCAGCTCGCGTCTACCTGTACTATCAAG | + |
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Preference number: 5 (lower is better) Translates to: IQGNGLWTAQRSGQL*LSAGDQLASTCTIK Trigger: CTTGATAGTACAGGTAGACGCGAGCTGATCGCCAGCTGAGAGGCAGAGCTGGCCTGATCTCTGTGCGGTCCACAGACCGTTGCCCTGTAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552947.1 |
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| CDS GCA 90 bp | AGTCACAGTCAACATCCTGGGTGCCCACGGTGCCAATGGAGTAGGTaGCCTCCTTCTTGTAGTGGAACTTGCCTGTGCTGCGGTGCAGAA | + |
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Preference number: 5 (lower is better) Translates to: SHSQHPGCPRCQWSR*PPSCSGTCLCCGAE Trigger: TTCTGCACCGCAGCACAGGCAAGTTCCACTACAAGAAGGAGGGCACCTACTCCATTGGCACCGTGGGCACCCAGGATGTTGACTGTGACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000336854.9 ENST00000548915.1 ENST00000550604.1 ENST00000552544.5 ENST00000553049.5 |
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| CDS CCA 90 bp | CGTCCCGCAAGCCTGTGTCAAACACGTTATCCACCTCCGACTGTGTaGGCATCTTGGGCAAGTACTCATGCCGATTCATCACCTCCACGA | + |
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Preference number: 5 (lower is better) Translates to: RPASLCQTRYPPPTV*ASWASTHADSSPPR Trigger: TCGTGGAGGTGATGAATCGGCATGAGTACTTGCCCAAGATGCCCACACAGTCGGAGGTGGATAACGTGTTTGACACAGGCTTGCGGGACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000336854.9 ENST00000553049.5 |
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| CDS CCA 90 bp | CCTGGAGATGAGCCCACACCGCTGTACTGCAGGACGCCCAGTGGATaGCAAAACTTGAGTTTGTTGAATGTGCGTAACAGACGGGATCCC | + |
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Preference number: 5 (lower is better) Translates to: PGDEPTPLYCRTPSG*QNLSLLNVRNRRDP Trigger: GGGATCCCGTCTGTTACGCACATTCAACAAACTCAAGTTTTGCCATCCACTGGGCGTCCTGCAGTACAGCGGTGTGGGCTCATCTCCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547409.1 |
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| CDS GCA 90 bp | TACCCCGTAGAGAGAGGTCCTGGAGATGAGCCCACACCGCTGTACTaGAGGACGCCCAGTGGATGGCAAAACTTGAGTTTGTTGAATGTG | + |
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Preference number: 5 (lower is better) Translates to: YPVERGPGDEPTPLY*RTPSGWQNLSLLNV Trigger: CACATTCAACAAACTCAAGTTTTGCCATCCACTGGGCGTCCTGCAGTACAGCGGTGTGGGCTCATCTCCAGGACCTCTCTCTACGGGGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000547409.1 |
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| CDS TCA 90 bp | CACATGCACCTTGACCGTCCACACTTCCCATGGGATGCACTCGTCTaGGAATGGCCAGCGAGACTTCTTCTTCTGGTAGAACTCCAAGGA | + |
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Preference number: 5 (lower is better) Translates to: HMHLDRPHFPWDALV*EWPARLLLLVELQG Trigger: TCCTTGGAGTTCTACCAGAAGAAGAAGTCTCGCTGGCCATTCTCAGACGAGTGCATCCCATGGGAAGTGTGGACGGTCAAGGTGCATGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000336854.9 ENST00000548915.1 ENST00000553049.5 |
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| CDS CCA 90 bp | TGGCAAAACTTGAGTTTGTTGAATGTGCGTAACAGACGGGATCCCTaGCCCTCCACCCACACAGATGCTGGAGAAAGGGGCTTCATCTCT | + |
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Preference number: 5 (lower is better) Translates to: WQNLSLLNVRNRRDP*PSTHTDAGERGFIS Trigger: AGAGATGAAGCCCCTTTCTCCAGCATCTGTGTGGGTGGAGGGCCAGGGATCCCGTCTGTTACGCACATTCAACAAACTCAAGTTTTGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000547409.1 |
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| CDS TCA 90 bp | AAGGGGCTTCATCTCTCAGTGTTGCCTTTATGCAGCAGCACTACTTaGTACCCCATGGTGACCAATCTGGTGACAGTCCTTCGGAGGCTA | + |
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Preference number: 5 (lower is better) Translates to: KGLHLSVLPLCSSTT*YPMVTNLVTVLRRL Trigger: TAGCCTCCGAAGGACTGTCACCAGATTGGTCACCATGGGGTATCAAGTAGTGCTGCTGCATAAAGGCAACACTGAGAGATGAAGCCCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000547409.1 |
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| CDS GCA 90 bp | ACGTTATCCACCTCCGACTGTGTGGGCATCTTGGGCAAGTACTCATaGCGATTCATCACCTCCACGATGTTGATGATCTTCTCGCAGAGT | + |
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Preference number: 5 (lower is better) Translates to: TLSTSDCVGILGKYS*RFITSTMLMIFSQS Trigger: ACTCTGCGAGAAGATCATCAACATCGTGGAGGTGATGAATCGGCATGAGTACTTGCCCAAGATGCCCACACAGTCGGAGGTGGATAACGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000336854.9 ENST00000553049.5 |
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| CDS GCA 90 bp | TGCTCAATTGAGCCCAACCCAGGAATTCCAGGTTCTTCCAGGGGTTaGTGGATTAGTTTCTCCTACATGCTTGGATCAAGAAGGAGAAGG | + |
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Preference number: 5 (lower is better) Translates to: CSIEPNPGIPGSSRG*WISFSYMLGSRRRR Trigger: CCTTCTCCTTCTTGATCCAAGCATGTAGGAGAAACTAATCCAGCAACCCCTGGAAGAACCTGGAATTCCTGGGTTGGGCTCAATTGAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000552947.1 |
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| CDS CCA 90 bp | TCAATTGAGCCCAACCCAGGAATTCCAGGTTCTTCCAGGGGTTGCTaGATTAGTTTCTCCTACATGCTTGGATCAAGAAGGAGAAGGGCT | + |
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Preference number: 5 (lower is better) Translates to: SIEPNPGIPGSSRGC*ISFSYMLGSRRRRA Trigger: AGCCCTTCTCCTTCTTGATCCAAGCATGTAGGAGAAACTAATCCAGCAACCCCTGGAAGAACCTGGAATTCCTGGGTTGGGCTCAATTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000552947.1 |
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| CDS CCA 90 bp | CCAGTCCTCAAAAACATGTCTGTTCCACATCACATCTTATCTGCATaGAATCCTAGCAGCTCTCCTCTAAGTATATTTCACTCATCTGGT | + |
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Preference number: 5 (lower is better) Translates to: PVLKNMSVPHHILSA*NPSSSPLSIFHSSG Trigger: ACCAGATGAGTGAAATATACTTAGAGGAGAGCTGCTAGGATTCCATGCAGATAAGATGTGATGTGGAACAGACATGTTTTTGAGGACTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000552947.1 |
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| CDS TCA 72 bp | GACCTCCGCAGGTACGCTTCAACCTCCGCACGGCGCTaGGCCACAAGAGACCAGCAGATCCCACGGCCCCGG | + |
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Preference number: 6 (lower is better) Translates to: DLRRYASTSARR*ATRDQQIPRPR Trigger: CCGGGGCCGTGGGATCTGCTGGTCTCTTGTGGCTCAGCGCCGTGCGGAGGTTGAAGCGTACCTGCGGAGGTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547409.1 |
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| CDS GCA 72 bp | ATCGGCGGCGAGCCTGGCCGGGAGACGCTGACGCGGTaGCCAACTCAGTCCGGACTGAGAGGTCTGGAAGGA | + |
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Preference number: 6 (lower is better) Translates to: IGGEPGRETLTR*PTQSGLRGLEG Trigger: TCCTTCCAGACCTCTCAGTCCGGACTGAGTTGGGCACCGCGTCAGCGTCTCCCGGCCAGGCTCGCCGCCGAT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000547409.1 |
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| CDS TCA 72 bp | GACCTCCGCAGGTACGCTTCAACCTCCGCACGGCGCTaGGCCACAAGAGACCAGCTCCCCCAACCACAGTCC | + |
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Preference number: 6 (lower is better) Translates to: DLRRYASTSARR*ATRDQLPQPQS Trigger: GGACTGTGGTTGGGGGAGCTGGTCTCTTGTGGCTCAGCGCCGTGCGGAGGTTGAAGCGTACCTGCGGAGGTC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000553049.5 |
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| CDS TCA 72 bp | GACCTCCGCAGGTACGCTTCAACCTCCGCACGGCGCTaGGCCACAAGAGACCAGCAGCCTCTCAGATGCCAC | + |
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Preference number: 6 (lower is better) Translates to: DLRRYASTSARR*ATRDQQPLRCH Trigger: GTGGCATCTGAGAGGCTGCTGGTCTCTTGTGGCTCAGCGCCGTGCGGAGGTTGAAGCGTACCTGCGGAGGTC 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000548915.1 |
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| CDS GCA 72 bp | TTCTCACCCACCTTCTCCCGGCAGATCTGCCGCTCCTaGTCCGTGGCCAGGGCTACCACATGCACCTTGACC | + |
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Preference number: 6 (lower is better) Translates to: FSPTFSRQICRS*SVARATTCTLT Trigger: GGTCAAGGTGCATGTGGTAGCCCTGGCCACGGAGCAGGAGCGGCAGATCTGCCGGGAGAAGGTGGGTGAGAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000336854.9 ENST00000553049.5 |
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| CDS GCA 72 bp | TCGCAGAGTTTCTCACCCACCTTCTCCCGGCAGATCTaGCGCTCCTGCTCCGTGGCCAGGGCTACCACATGC | + |
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Preference number: 6 (lower is better) Translates to: SQSFSPTFSRQI*RSCSVARATTC Trigger: GCATGTGGTAGCCCTGGCCACGGAGCAGGAGCGGCAGATCTGCCGGGAGAAGGTGGGTGAGAAACTCTGCGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000336854.9 ENST00000553049.5 |
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| CDS CCA 72 bp | GTTTCGGCCCGTACAACTCACTTCCGCCATAGAGACTaGAGGGAAGGAGGAGCCCTACGGGCTCTCGGCCGC | + |
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Preference number: 6 (lower is better) Translates to: VSARTTHFRHRD*REGGALRALGR Trigger: GCGGCCGAGAGCCCGTAGGGCTCCTCCTTCCCTCCAGTCTCTATGGCGGAAGTGAGTTGTACGGGCCGAAAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000547409.1 |
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| CDS GCA 72 bp | ATCTGCCGCTCCTGCTCCGTGGCCAGGGCTACCACATaGACCTTGACCGTCCACACTTCCCATGGGATGCAC | + |
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Preference number: 6 (lower is better) Translates to: ICRSCSVARATT*TLTVHTSHGMH Trigger: GTGCATCCCATGGGAAGTGTGGACGGTCAAGGTGCATGTGGTAGCCCTGGCCACGGAGCAGGAGCGGCAGAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000336854.9 ENST00000548915.1 ENST00000553049.5 |
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| CDS CCA 72 bp | GTGGCAGAGGCTAACAGCCGCCTTCTCAAGCCTGGCTaGAGCACAGGGTGCGCCCATTCCCACCTTGAGTGT | + |
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Preference number: 6 (lower is better) Translates to: VAEANSRLLKPG*STGCAHSHLEC Trigger: ACACTCAAGGTGGGAATGGGCGCACCCTGTGCTCCAGCCAGGCTTGAGAAGGCGGCTGTTAGCCTCTGCCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552947.1 |
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| CDS GCA 72 bp | AACGGTCTGTGGACCGCACAGAGATCAGGCCAGCTCTaGCTCTCAGCTGGCGATCAGCTCGCGTCTACCTGT | + |
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Preference number: 6 (lower is better) Translates to: NGLWTAQRSGQL*LSAGDQLASTC Trigger: ACAGGTAGACGCGAGCTGATCGCCAGCTGAGAGGCAGAGCTGGCCTGATCTCTGTGCGGTCCACAGACCGTT 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552947.1 |
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| CDS GCA 72 bp | AGGTGCCCTCCTTCTTGTAGTGGAACTTGCCTGTGCTaGGGTGCAGAAGCACCGTGTGCAGCACAGCCAGCA | + |
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Preference number: 6 (lower is better) Translates to: RCPPSCSGTCLC*GAEAPCAAQPA Trigger: TGCTGGCTGTGCTGCACACGGTGCTTCTGCACCGCAGCACAGGCAAGTTCCACTACAAGAAGGAGGGCACCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000336854.9 ENST00000548915.1 ENST00000550604.1 ENST00000552544.5 ENST00000553049.5 |
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| CDS CAA 90 bp | CTCCCGGCTCTGGTCCGGCTCCCTTTCTTCCACGACTTCTCCCTCTaGTGTCCCCCGCAATCGTTCACACAAGCCACACATCTCACTTGT | + |
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Preference number: 6 (lower is better) Translates to: LPALVRLPFFHDFSL*CPPQSFTQATHLTC Trigger: ACAAGTGAGATGTGTGGCTTGTGTGAACGATTGCGGGGGACACAAGAGGGAGAAGTCGTGGAAGAAAGGGAGCCGGACCAGAGCCGGGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000552947.1 |
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| CDS GCA 72 bp | AGTAGGTGCCCTCCTTCTTGTAGTGGAACTTGCCTGTaGTGCGGTGCAGAAGCACCGTGTGCAGCACAGCCA | + |
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Preference number: 6 (lower is better) Translates to: SRCPPSCSGTCL*CGAEAPCAAQP Trigger: TGGCTGTGCTGCACACGGTGCTTCTGCACCGCAGCACAGGCAAGTTCCACTACAAGAAGGAGGGCACCTACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000336854.9 ENST00000548915.1 ENST00000550604.1 ENST00000552544.5 ENST00000553049.5 |
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| CDS GCA 72 bp | CAACATCCTGGGTGCCCACGGTGCCAATGGAGTAGGTaGCCTCCTTCTTGTAGTGGAACTTGCCTGTGCTGC | + |
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Preference number: 6 (lower is better) Translates to: QHPGCPRCQWSR*PPSCSGTCLCC Trigger: GCAGCACAGGCAAGTTCCACTACAAGAAGGAGGGCACCTACTCCATTGGCACCGTGGGCACCCAGGATGTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000336854.9 ENST00000548915.1 ENST00000550604.1 ENST00000552544.5 ENST00000553049.5 |
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| CDS CCA 72 bp | GACCGCACAGAGATCAGGCCAGCTCTGCCTCTCAGCTaGCGATCAGCTCGCGTCTACCTGTACTATCAAGCA | + |
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Preference number: 6 (lower is better) Translates to: DRTEIRPALPLS*RSARVYLYYQA Trigger: TGCTTGATAGTACAGGTAGACGCGAGCTGATCGCCAGCTGAGAGGCAGAGCTGGCCTGATCTCTGTGCGGTC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552947.1 |
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| CDS CCA 72 bp | ACTGTTGCTCAGCACAGGATACAGGGCAACGGTCTGTaGACCGCACAGAGATCAGGCCAGCTCTGCCTCTCA | + |
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Preference number: 6 (lower is better) Translates to: TVAQHRIQGNGL*TAQRSGQLCLS Trigger: TGAGAGGCAGAGCTGGCCTGATCTCTGTGCGGTCCACAGACCGTTGCCCTGTATCCTGTGCTGAGCAACAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552947.1 |
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| CDS CAA 72 bp | AGCCTGGCTGGAGCACAGGGTGCGCCCATTCCCACCTaGAGTGTAGAGTTTGGAGCACGGATTCCTCAAGCT | + |
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Preference number: 6 (lower is better) Translates to: SLAGAQGAPIPT*SVEFGARIPQA Trigger: AGCTTGAGGAATCCGTGCTCCAAACTCTACACTCAAGGTGGGAATGGGCGCACCCTGTGCTCCAGCCAGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552947.1 |
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| CDS CAA 90 bp | CCGCTGTACTGCAGGACGCCCAGTGGATGGCAAAACTTGAGTTTGTaGAATGTGCGTAACAGACGGGATCCCTGGCCCTCCACCCACACA | + |
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Preference number: 6 (lower is better) Translates to: PLYCRTPSGWQNLSL*NVRNRRDPWPSTHT Trigger: TGTGTGGGTGGAGGGCCAGGGATCCCGTCTGTTACGCACATTCAACAAACTCAAGTTTTGCCATCCACTGGGCGTCCTGCAGTACAGCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547409.1 |
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| CDS CAA 90 bp | ACACCGCTGTACTGCAGGACGCCCAGTGGATGGCAAAACTTGAGTTaGTTGAATGTGCGTAACAGACGGGATCCCTGGCCCTCCACCCAC | + |
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Preference number: 6 (lower is better) Translates to: TPLYCRTPSGWQNLS*LNVRNRRDPWPSTH Trigger: GTGGGTGGAGGGCCAGGGATCCCGTCTGTTACGCACATTCAACAAACTCAAGTTTTGCCATCCACTGGGCGTCCTGCAGTACAGCGGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547409.1 |
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| CDS TCA 72 bp | GACCTCCGCAGGTACGCTTCAACCTCCGCACGGCGCTaGGCCACAAGAGACCAGCTAAAAGCAAAACCAGAA | + |
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Preference number: 6 (lower is better) Translates to: DLRRYASTSARR*ATRDQLKAKPE Trigger: TTCTGGTTTTGCTTTTAGCTGGTCTCTTGTGGCTCAGCGCCGTGCGGAGGTTGAAGCGTACCTGCGGAGGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000552544.5 |
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| CDS GCA 72 bp | CAATGGAGTAGGTGCCCTCCTTCTTGTAGTGGAACTTaGCTGTGCTGCGGTGCAGAAGCACCGTGTGCAGCA | + |
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Preference number: 6 (lower is better) Translates to: QWSRCPPSCSGT*LCCGAEAPCAA Trigger: TGCTGCACACGGTGCTTCTGCACCGCAGCACAGGCAAGTTCCACTACAAGAAGGAGGGCACCTACTCCATTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000336854.9 ENST00000548915.1 ENST00000550604.1 ENST00000552544.5 ENST00000553049.5 |
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| CDS GCA 72 bp | GAGAGAGGTCCTGGAGATGAGCCCACACCGCTGTACTaGAGGACGCCCAGTGGATGGCAAAACTTGAGTTTG | + |
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Preference number: 6 (lower is better) Translates to: ERGPGDEPTPLY*RTPSGWQNLSL Trigger: CAAACTCAAGTTTTGCCATCCACTGGGCGTCCTGCAGTACAGCGGTGTGGGCTCATCTCCAGGACCTCTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547409.1 |
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| CDS CCA 72 bp | TCACCCTACCCAAGGGCCACCCTTGAGTGTAGAGTTTaGAGCACGGATTCCTCAAGCTCGGCTCATGCCCTT | + |
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Preference number: 6 (lower is better) Translates to: SPYPRATLECRV*STDSSSSAHAL Trigger: AAGGGCATGAGCCGAGCTTGAGGAATCCGTGCTCCAAACTCTACACTCAAGGGTGGCCCTTGGGTAGGGTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000336854.9 ENST00000548915.1 ENST00000552544.5 ENST00000553049.5 |
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| CDS CCA 72 bp | ACAGGGTGCGCCCATTCCCACCTTGAGTGTAGAGTTTaGAGCACGGATTCCTCAAGCTCGGCTCATGCCCTT | + |
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Preference number: 6 (lower is better) Translates to: TGCAHSHLECRV*STDSSSSAHAL Trigger: AAGGGCATGAGCCGAGCTTGAGGAATCCGTGCTCCAAACTCTACACTCAAGGTGGGAATGGGCGCACCCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552947.1 |
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| CDS CAA 72 bp | CTGGTCCGGCTCCCTTTCTTCCACGACTTCTCCCTCTaGTGTCCCCCGCAATCGTTCACACAAGCCACACAT | + |
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Preference number: 6 (lower is better) Translates to: LVRLPFFHDFSL*CPPQSFTQATH Trigger: ATGTGTGGCTTGTGTGAACGATTGCGGGGGACACAAGAGGGAGAAGTCGTGGAAGAAAGGGAGCCGGACCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000552947.1 |
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| CDS CAA 72 bp | GAGTTGCGCAGTGCATCCTTGAACTCCCCAACAACCTaGCGCAGGGCACGATCCAGTTCCTCAGAAGAGACA | + |
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Preference number: 6 (lower is better) Translates to: ELRSASLNSPTT*RRARSSSSEET Trigger: TGTCTCTTCTGAGGAACTGGATCGTGCCCTGCGCAAGGTTGTTGGGGAGTTCAAGGATGCACTGCGCAACTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000336854.9 ENST00000548915.1 ENST00000553049.5 |
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| CDS CAA 72 bp | TGCAGGACGCCCAGTGGATGGCAAAACTTGAGTTTGTaGAATGTGCGTAACAGACGGGATCCCTGGCCCTCC | + |
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Preference number: 6 (lower is better) Translates to: CRTPSGWQNLSL*NVRNRRDPWPS Trigger: GGAGGGCCAGGGATCCCGTCTGTTACGCACATTCAACAAACTCAAGTTTTGCCATCCACTGGGCGTCCTGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547409.1 |
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| CDS CAA 72 bp | CGCGTAGTCACAGAAGCACACGCAGATAGTCATGCGTaGCTCTCTGATCTGGGGGCTGCTCCTTTCGTGGTT | + |
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Preference number: 6 (lower is better) Translates to: RVVTEAHADSHA*LSDLGAAPFVV Trigger: AACCACGAAAGGAGCAGCCCCCAGATCAGAGAGCAACGCATGACTATCTGCGTGTGCTTCTGTGACTACGCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000547409.1 |
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| CDS CAA 90 bp | CACAACATCCGCGTAGTCACAGAAGCACACGCAGATAGTCATGCGTaGCTCTCTGATCTGGGGGCTGCTCCTTTCGTGGTTATGTCTCGG | + |
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Preference number: 6 (lower is better) Translates to: HNIRVVTEAHADSHA*LSDLGAAPFVVMSR Trigger: CCGAGACATAACCACGAAAGGAGCAGCCCCCAGATCAGAGAGCAACGCATGACTATCTGCGTGTGCTTCTGTGACTACGCGGATGTTGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000547409.1 |
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| CDS CAA 72 bp | TACTGCAGGACGCCCAGTGGATGGCAAAACTTGAGTTaGTTGAATGTGCGTAACAGACGGGATCCCTGGCCC | + |
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Preference number: 6 (lower is better) Translates to: YCRTPSGWQNLS*LNVRNRRDPWP Trigger: GGGCCAGGGATCCCGTCTGTTACGCACATTCAACAAACTCAAGTTTTGCCATCCACTGGGCGTCCTGCAGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547409.1 |
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| CDS TCA 72 bp | CTTGACCGTCCACACTTCCCATGGGATGCACTCGTCTaGGAATGGCCAGCGAGACTTCTTCTTCTGGTAGAA | + |
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Preference number: 6 (lower is better) Translates to: LDRPHFPWDALV*EWPARLLLLVE Trigger: TTCTACCAGAAGAAGAAGTCTCGCTGGCCATTCTCAGACGAGTGCATCCCATGGGAAGTGTGGACGGTCAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000336854.9 ENST00000548915.1 ENST00000553049.5 |
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| CDS CCA 72 bp | CAAACACGTTATCCACCTCCGACTGTGTGGGCATCTTaGGCAAGTACTCATGCCGATTCATCACCTCCACGA | + |
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Preference number: 6 (lower is better) Translates to: QTRYPPPTVWAS*ASTHADSSPPR Trigger: TCGTGGAGGTGATGAATCGGCATGAGTACTTGCCCAAGATGCCCACACAGTCGGAGGTGGATAACGTGTTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000336854.9 ENST00000553049.5 |
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| CDS CCA 72 bp | GAGCCCACACCGCTGTACTGCAGGACGCCCAGTGGATaGCAAAACTTGAGTTTGTTGAATGTGCGTAACAGA | + |
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Preference number: 6 (lower is better) Translates to: EPTPLYCRTPSG*QNLSLLNVRNR Trigger: TCTGTTACGCACATTCAACAAACTCAAGTTTTGCCATCCACTGGGCGTCCTGCAGTACAGCGGTGTGGGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547409.1 |
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| CDS CAA 90 bp | AAAGGGGCTTCATCTCTCAGTGTTGCCTTTATGCAGCAGCACTACTaGATACCCCATGGTGACCAATCTGGTGACAGTCCTTCGGAGGCT | + |
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Preference number: 6 (lower is better) Translates to: KGASSLSVAFMQQHY*IPHGDQSGDSPSEA Trigger: AGCCTCCGAAGGACTGTCACCAGATTGGTCACCATGGGGTATCAAGTAGTGCTGCTGCATAAAGGCAACACTGAGAGATGAAGCCCCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000547409.1 |
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| CDS GCA 72 bp | ACCTCCGACTGTGTGGGCATCTTGGGCAAGTACTCATaGCGATTCATCACCTCCACGATGTTGATGATCTTC | + |
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Preference number: 6 (lower is better) Translates to: TSDCVGILGKYS*RFITSTMLMIF Trigger: GAAGATCATCAACATCGTGGAGGTGATGAATCGGCATGAGTACTTGCCCAAGATGCCCACACAGTCGGAGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000336854.9 ENST00000553049.5 |
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| CDS CCA 72 bp | AGCCTGTGTCAAACACGTTATCCACCTCCGACTGTGTaGGCATCTTGGGCAAGTACTCATGCCGATTCATCA | + |
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Preference number: 6 (lower is better) Translates to: SLCQTRYPPPTV*ASWASTHADSS Trigger: TGATGAATCGGCATGAGTACTTGCCCAAGATGCCCACACAGTCGGAGGTGGATAACGTGTTTGACACAGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000336854.9 ENST00000553049.5 |
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| CDS CCA 72 bp | AAGCACACGCAGATAGTCATGCGTTGCTCTCTGATCTaGGGGCTGCTCCTTTCGTGGTTATGTCTCGGATTT | + |
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Preference number: 6 (lower is better) Translates to: KHTQIVMRCSLI*GLLLSWLCLGF Trigger: AAATCCGAGACATAACCACGAAAGGAGCAGCCCCCAGATCAGAGAGCAACGCATGACTATCTGCGTGTGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547409.1 |
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| CDS GCA 72 bp | ACAGATGCTGGAGAAAGGGGCTTCATCTCTCAGTGTTaGCTTTATGCAGCAGCACTACTTGATACCCCATGG | + |
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Preference number: 6 (lower is better) Translates to: TDAGERGFISQC*LYAAALLDTPW Trigger: CCATGGGGTATCAAGTAGTGCTGCTGCATAAAGGCAACACTGAGAGATGAAGCCCCTTTCTCCAGCATCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000547409.1 |
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| CDS GCA 72 bp | CCTACATGCTTGGATCAAGAAGGAGAAGGGCTCTCTTaGTCGTTTTGCCCTCCAGTTTTACTCCATCCAGCA | + |
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Preference number: 6 (lower is better) Translates to: PTCLDQEGEGLS*SFCPPVLLHPA Trigger: TGCTGGATGGAGTAAAACTGGAGGGCAAAACGAGCAAGAGAGCCCTTCTCCTTCTTGATCCAAGCATGTAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000552947.1 |
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| CDS GCA 72 bp | GAGCCCAACCCAGGAATTCCAGGTTCTTCCAGGGGTTaGTGGATTAGTTTCTCCTACATGCTTGGATCAAGA | + |
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Preference number: 6 (lower is better) Translates to: EPNPGIPGSSRG*WISFSYMLGSR Trigger: TCTTGATCCAAGCATGTAGGAGAAACTAATCCAGCAACCCCTGGAAGAACCTGGAATTCCTGGGTTGGGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000552947.1 |
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| CDS CCA 72 bp | CCCAACCCAGGAATTCCAGGTTCTTCCAGGGGTTGCTaGATTAGTTTCTCCTACATGCTTGGATCAAGAAGG | + |
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Preference number: 6 (lower is better) Translates to: PNPGIPGSSRGC*ISFSYMLGSRR Trigger: CCTTCTTGATCCAAGCATGTAGGAGAAACTAATCCAGCAACCCCTGGAAGAACCTGGAATTCCTGGGTTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000552947.1 |
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| CDS CAA 72 bp | TCCTACATGCTTGGATCAAGAAGGAGAAGGGCTCTCTaGCTCGTTTTGCCCTCCAGTTTTACTCCATCCAGC | + |
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Preference number: 6 (lower is better) Translates to: SYMLGSRRRRAL*LVLPSSFTPSS Trigger: GCTGGATGGAGTAAAACTGGAGGGCAAAACGAGCAAGAGAGCCCTTCTCCTTCTTGATCCAAGCATGTAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000552947.1 |
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| CDS TCA 72 bp | CATCTCTCAGTGTTGCCTTTATGCAGCAGCACTACTTaGTACCCCATGGTGACCAATCTGGTGACAGTCCTT | + |
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Preference number: 6 (lower is better) Translates to: HLSVLPLCSSTT*YPMVTNLVTVL Trigger: AAGGACTGTCACCAGATTGGTCACCATGGGGTATCAAGTAGTGCTGCTGCATAAAGGCAACACTGAGAGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547409.1 |
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| CDS CAA 72 bp | TCATCTCTCAGTGTTGCCTTTATGCAGCAGCACTACTaGATACCCCATGGTGACCAATCTGGTGACAGTCCT | + |
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Preference number: 6 (lower is better) Translates to: SSLSVAFMQQHY*IPHGDQSGDSP Trigger: AGGACTGTCACCAGATTGGTCACCATGGGGTATCAAGTAGTGCTGCTGCATAAAGGCAACACTGAGAGATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547409.1 |
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| CDS GCA 72 bp | GTATATTTCAGTTTGTGTCTGCCCCTTTTAAACTGTTaGTCAGCACAGGATACAGGGCAACGGTCTGTGGAC | + |
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Preference number: 6 (lower is better) Translates to: VYFSLCLPLLNC*SAQDTGQRSVD Trigger: GTCCACAGACCGTTGCCCTGTATCCTGTGCTGAGCAACAGTTTAAAAGGGGCAGACACAAACTGAAATATAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000552947.1 |
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| CDS CAA 72 bp | CTTGGATCAAGAAGGAGAAGGGCTCTCTTGCTCGTTTaGCCCTCCAGTTTTACTCCATCCAGCAGTTTTCTT | + |
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Preference number: 6 (lower is better) Translates to: LGSRRRRALLLV*PSSFTPSSSFL Trigger: AAGAAAACTGCTGGATGGAGTAAAACTGGAGGGCAAAACGAGCAAGAGAGCCCTTCTCCTTCTTGATCCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000552947.1 |
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| CDS CAA 72 bp | GTAATTCCTAGTACCTTCTACAAAACAACTGCTCAATaGAGCCCAACCCAGGAATTCCAGGTTCTTCCAGGG | + |
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Preference number: 6 (lower is better) Translates to: VIPSTFYKTTAQ*SPTQEFQVLPG Trigger: CCCTGGAAGAACCTGGAATTCCTGGGTTGGGCTCAATTGAGCAGTTGTTTTGTAGAAGGTACTAGGAATTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000552947.1 |
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| CDS CAA 72 bp | AGTATATTTCAGTTTGTGTCTGCCCCTTTTAAACTGTaGCTCAGCACAGGATACAGGGCAACGGTCTGTGGA | + |
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Preference number: 6 (lower is better) Translates to: SIFQFVSAPFKL*LSTGYRATVCG Trigger: TCCACAGACCGTTGCCCTGTATCCTGTGCTGAGCAACAGTTTAAAAGGGGCAGACACAAACTGAAATATACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000552947.1 |
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| CDS CAA 90 bp | ACTATAATGGTAATTCCTAGTACCTTCTACAAAACAACTGCTCAATaGAGCCCAACCCAGGAATTCCAGGTTCTTCCAGGGGTTGCTGGA | + |
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Preference number: 6 (lower is better) Translates to: TIMVIPSTFYKTTAQ*SPTQEFQVLPGVAG Trigger: TCCAGCAACCCCTGGAAGAACCTGGAATTCCTGGGTTGGGCTCAATTGAGCAGTTGTTTTGTAGAAGGTACTAGGAATTACCATTATAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000552947.1 |
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