RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ATF7IP2 (Homo sapiens)

Ensembl gene IDs: ENSG00000166669

Ensembl transcript IDs: ENST00000324570.9, ENST00000356427.2, ENST00000396559.5, ENST00000396560.6, ENST00000535850.5, ENST00000561932.5, ENST00000562102.5, ENST00000562396.1, ENST00000562527.5, ENST00000564797.5, ENST00000566316.5, ENST00000568027.5, ENST00000570163.1

Found 298 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TTATTTGCTCAAGTTTGCCTCCATTGGGCCCCGTTCAGAGTTTCTTaGGCTGCTTGTACTAGTCACAGCTCCACTTCCATCTCTTCTCAG +
Preference number: 1 (lower is better)
Translates to: LFAQVCLHWAPFRVS*AACTSHSSTSISSQ
Trigger: CTGAGAAGAGATGGAAGTGGAGCTGTGACTAGTACAAGCAGCCCAAGAAACTCTGAACGGGGCCCAATGGAGGCAAACTTGAGCAAATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
3UTR TCA 90 bp TCAGGAAGAGGTGGGCACAAGACACATCTGAGCCCCTTAGTATTGTaGTGGTGGCCAGGAAATGATCAAAGGGTAGCATTTAGGAAATCA +
Preference number: 1 (lower is better)
Translates to: SGRGGHKTHLSPLVL*WWPGNDQRVAFRKS
Trigger: TGATTTCCTAAATGCTACCCTTTGATCATTTCCTGGCCACCATCACAATACTAAGGGGCTCAGATGTGTCTTGTGCCCACCTCTTCCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
3UTR GCA 90 bp TTTGAGTCTCTGGAGCCTGAACTCTCACCATGTACCAGAAAAGAATaGCCCTCTTTCGAACTTTCAAACAGTTGGGATTATTTTTGTTTC +
Preference number: 1 (lower is better)
Translates to: FESLEPELSPCTRKE*PSFELSNSWDYFCF
Trigger: GAAACAAAAATAATCCCAACTGTTTGAAAGTTCGAAAGAGGGGCATTCTTTTCTGGTACATGGTGAGAGTTCAGGCTCCAGAGACTCAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
3UTR-3UTR TCA 90 bp TGCTCAAGTTTGCCTCCATTGGGCCCCGTTCAGAGTTTCTTGGGCTGCTTGTACGGTGCACTCCAGGGATaGTCTGGCCCTCAGTCAAGG +
Preference number: 2 (lower is better)
Translates to: CSSLPPLGPVQSFLGCLYGALQG*SGPQSR
Trigger: CCTTGACTGAGGGCCAGATCATCCCTGGAGTGCACC...GTACAAGCAGCCCAAGAAACTCTGAACGGGGCCCAATGGAGGCAAACTTGAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
3UTR-3UTR TCA 90 bp CAAGTTTGCCTCCATTGGGCCCCGTTCAGAGTTTCTTGGGCTGCTTGTACTAGTGGCGGGTGGATCCCCTaGGGTCAGGAGTTTGAGACC +
Preference number: 2 (lower is better)
Translates to: QVCLHWAPFRVSWAACTSGGWIP*GQEFET
Trigger: GGTCTCAAACTCCTGACCTCAGGGGATCCACCCGCC...ACTAGTACAAGCAGCCCAAGAAACTCTGAACGGGGCCCAATGGAGGCAAACTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
3UTR-3UTR TCA 90 bp AGTCTCTGGAGCCTGAACTCTCACCATGTACCAGAAAAGAATGCCCCTCTTTCGGGCGGGTGGATCCCCTaGGGTCAGGAGTTTGAGACC +
Preference number: 2 (lower is better)
Translates to: SLWSLNSHHVPEKNAPLSGGWIP*GQEFET
Trigger: GGTCTCAAACTCCTGACCTCAGGGGATCCACCCGCC...CGAAAGAGGGGCATTCTTTTCTGGTACATGGTGAGAGTTCAGGCTCCAGAGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
3UTR-3UTR TCA 90 bp GAGTTTCTTGGGCTGCTTGTACTAGTCACAGCTCCACTTCCATCTCTTCTCAGGGGTGCACTCCAGGGATaGTCTGGCCCTCAGTCAAGG +
Preference number: 2 (lower is better)
Translates to: EFLGLLVLVTAPLPSLLRGALQG*SGPQSR
Trigger: CCTTGACTGAGGGCCAGATCATCCCTGGAGTGCACC...CCTGAGAAGAGATGGAAGTGGAGCTGTGACTAGTACAAGCAGCCCAAGAAACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
3UTR-3UTR TCA 90 bp CCATCTCTTCTCAGGAAGAGGTGGGCACAAGACACATCTGAGCCCCTTAGTATTGGTGCACTCCAGGGATaGTCTGGCCCTCAGTCAAGG +
Preference number: 2 (lower is better)
Translates to: PSLLRKRWAQDTSEPLSIGALQG*SGPQSR
Trigger: CCTTGACTGAGGGCCAGATCATCCCTGGAGTGCACC...AATACTAAGGGGCTCAGATGTGTCTTGTGCCCACCTCTTCCTGAGAAGAGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
3UTR-3UTR TCA 90 bp AATTATTTGCTCAAGTTTGCCTCCATTGGGCCCCGTTCAGAGTTTCTTGGGCTGGGCGGGTGGATCCCCTaGGGTCAGGAGTTTGAGACC +
Preference number: 2 (lower is better)
Translates to: NYLLKFASIGPRSEFLGLGGWIP*GQEFET
Trigger: GGTCTCAAACTCCTGACCTCAGGGGATCCACCCGCC...CAGCCCAAGAAACTCTGAACGGGGCCCAATGGAGGCAAACTTGAGCAAATAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
3UTR-3UTR TCA 90 bp TTTCTTGGGCTGCTTGTACTAGTCACAGCTCCACTTCCATCTCTTCTCAGGAAGGGTGCACTCCAGGGATaGTCTGGCCCTCAGTCAAGG +
Preference number: 2 (lower is better)
Translates to: FLGLLVLVTAPLPSLLRKGALQG*SGPQSR
Trigger: CCTTGACTGAGGGCCAGATCATCCCTGGAGTGCACC...CTTCCTGAGAAGAGATGGAAGTGGAGCTGTGACTAGTACAAGCAGCCCAAGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
3UTR-3UTR TCA 90 bp CGTTCAGAGTTTCTTGGGCTGCTTGTACTAGTCACAGCTCCACTTCCATCTCTTGGTGCACTCCAGGGATaGTCTGGCCCTCAGTCAAGG +
Preference number: 2 (lower is better)
Translates to: RSEFLGLLVLVTAPLPSLGALQG*SGPQSR
Trigger: CCTTGACTGAGGGCCAGATCATCCCTGGAGTGCACC...AAGAGATGGAAGTGGAGCTGTGACTAGTACAAGCAGCCCAAGAAACTCTGAACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
3UTR-3UTR TCA 90 bp CAAGTTTGCCTCCATTGGGCCCCGTTCAGAGTTTCTTGGGCTGCTTGTACTAGTAAACCCGTTTCACTTTaGGCTCAGGCTTCTGGGGAG +
Preference number: 2 (lower is better)
Translates to: QVCLHWAPFRVSWAACTSKPVSL*AQASGE
Trigger: CTCCCCAGAAGCCTGAGCTCAAAGTGAAACGGGTTT...ACTAGTACAAGCAGCCCAAGAAACTCTGAACGGGGCCCAATGGAGGCAAACTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324570.9
ENST00000396559.5
ENST00000568027.5
3UTR-3UTR GCA 90 bp CAAGTTTGCCTCCATTGGGCCCCGTTCAGAGTTTCTTGGGCTGCTTGTACTAGTCAGGGAGATGGAGGTTaGAGTGACCACTGTACTCCA +
Preference number: 2 (lower is better)
Translates to: QVCLHWAPFRVSWAACTSQGDGG*SDHCTP
Trigger: TGGAGTACAGTGGTCACTGCAACCTCCATCTCCCTG...ACTAGTACAAGCAGCCCAAGAAACTCTGAACGGGGCCCAATGGAGGCAAACTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
3UTR-3UTR TCA 90 bp CATCTCTTCTCAGGAAGAGGTGGGCACAAGACACATCTGAGCCCCTTAGTATTGAAACCCGTTTCACTTTaGGCTCAGGCTTCTGGGGAG +
Preference number: 2 (lower is better)
Translates to: HLFSGRGGHKTHLSPLVLKPVSL*AQASGE
Trigger: CTCCCCAGAAGCCTGAGCTCAAAGTGAAACGGGTTT...CAATACTAAGGGGCTCAGATGTGTCTTGTGCCCACCTCTTCCTGAGAAGAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324570.9
ENST00000396559.5
ENST00000568027.5
3UTR-3UTR TCA 90 bp GAGTTTCTTGGGCTGCTTGTACTAGTCACAGCTCCACTTCCATCTCTTCTCAGGAAACCCGTTTCACTTTaGGCTCAGGCTTCTGGGGAG +
Preference number: 2 (lower is better)
Translates to: EFLGLLVLVTAPLPSLLRKPVSL*AQASGE
Trigger: CTCCCCAGAAGCCTGAGCTCAAAGTGAAACGGGTTT...CCTGAGAAGAGATGGAAGTGGAGCTGTGACTAGTACAAGCAGCCCAAGAAACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324570.9
ENST00000396559.5
ENST00000568027.5
3UTR-3UTR TCA 90 bp TGCTCAAGTTTGCCTCCATTGGGCCCCGTTCAGAGTTTCTTGGGCTGCTTGTACCATAGGAGAATTGCTTaGACCAGGGAGATGGAGGTT +
Preference number: 2 (lower is better)
Translates to: CSSLPPLGPVQSFLGCLYHRRIA*TREMEV
Trigger: AACCTCCATCTCCCTGGTTCAAGCAATTCTCCTATG...GTACAAGCAGCCCAAGAAACTCTGAACGGGGCCCAATGGAGGCAAACTTGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
3UTR-3UTR TCA 90 bp CACCATGTACCAGAAAAGAATGCCCCTCTTTCGAACTTTCAAACAGTTGGGATTGGCGGGTGGATCCCCTaGGGTCAGGAGTTTGAGACC +
Preference number: 2 (lower is better)
Translates to: HHVPEKNAPLSNFQTVGIGGWIP*GQEFET
Trigger: GGTCTCAAACTCCTGACCTCAGGGGATCCACCCGCC...AATCCCAACTGTTTGAAAGTTCGAAAGAGGGGCATTCTTTTCTGGTACATGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
3UTR-3UTR GCA 90 bp GAGTTTCTTGGGCTGCTTGTACTAGTCACAGCTCCACTTCCATCTCTTCTCAGGCAGGGAGATGGAGGTTaGAGTGACCACTGTACTCCA +
Preference number: 2 (lower is better)
Translates to: EFLGLLVLVTAPLPSLLRQGDGG*SDHCTP
Trigger: TGGAGTACAGTGGTCACTGCAACCTCCATCTCCCTG...CCTGAGAAGAGATGGAAGTGGAGCTGTGACTAGTACAAGCAGCCCAAGAAACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
3UTR-3UTR CCA 90 bp TGCTCAAGTTTGCCTCCATTGGGCCCCGTTCAGAGTTTCTTGGGCTGCTTGTACATAGTCCCAGCTACTTaGGAGGCTGACATAGGAGAA +
Preference number: 2 (lower is better)
Translates to: CSSLPPLGPVQSFLGCLYIVPAT*EADIGE
Trigger: TTCTCCTATGTCAGCCTCCCAAGTAGCTGGGACTAT...GTACAAGCAGCCCAAGAAACTCTGAACGGGGCCCAATGGAGGCAAACTTGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
3UTR-3UTR TCA 90 bp CAAGTTTGCCTCCATTGGGCCCCGTTCAGAGTTTCTTGGGCTGCTTGTACTAGTCATAGGAGAATTGCTTaGACCAGGGAGATGGAGGTT +
Preference number: 2 (lower is better)
Translates to: QVCLHWAPFRVSWAACTSHRRIA*TREMEV
Trigger: AACCTCCATCTCCCTGGTTCAAGCAATTCTCCTATG...ACTAGTACAAGCAGCCCAAGAAACTCTGAACGGGGCCCAATGGAGGCAAACTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
3UTR-3UTR GCA 90 bp TCAGAGTTTCTTGGGCTGCTTGTACTAGTCACAGCTCCACTTCCATCTCTTCTCCAGGGAGATGGAGGTTaGAGTGACCACTGTACTCCA +
Preference number: 2 (lower is better)
Translates to: SEFLGLLVLVTAPLPSLLQGDGG*SDHCTP
Trigger: TGGAGTACAGTGGTCACTGCAACCTCCATCTCCCTG...GAGAAGAGATGGAAGTGGAGCTGTGACTAGTACAAGCAGCCCAAGAAACTCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
3UTR-3UTR GCA 90 bp TCCCAATTATTTGCTCAAGTTTGCCTCCATTGGGCCCCGTTCAGAGTTTCTTGGCAGGGAGATGGAGGTTaGAGTGACCACTGTACTCCA +
Preference number: 2 (lower is better)
Translates to: SQLFAQVCLHWAPFRVSWQGDGG*SDHCTP
Trigger: TGGAGTACAGTGGTCACTGCAACCTCCATCTCCCTG...CCAAGAAACTCTGAACGGGGCCCAATGGAGGCAAACTTGAGCAAATAATTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
3UTR-3UTR CCA 90 bp CAAGTTTGCCTCCATTGGGCCCCGTTCAGAGTTTCTTGGGCTGCTTGTACTAGTATAGTCCCAGCTACTTaGGAGGCTGACATAGGAGAA +
Preference number: 2 (lower is better)
Translates to: QVCLHWAPFRVSWAACTSIVPAT*EADIGE
Trigger: TTCTCCTATGTCAGCCTCCCAAGTAGCTGGGACTAT...ACTAGTACAAGCAGCCCAAGAAACTCTGAACGGGGCCCAATGGAGGCAAACTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
3UTR-3UTR TCA 90 bp GAGTTTCTTGGGCTGCTTGTACTAGTCACAGCTCCACTTCCATCTCTTCTCAGGAAAGGGCTCACAATCTaGGCTGGCCTTTTACAATGG +
Preference number: 2 (lower is better)
Translates to: EFLGLLVLVTAPLPSLLRKGLTI*AGLLQW
Trigger: CCATTGTAAAAGGCCAGCTCAGATTGTGAGCCCTTT...CCTGAGAAGAGATGGAAGTGGAGCTGTGACTAGTACAAGCAGCCCAAGAAACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
3UTR-3UTR TCA 90 bp CCATCTCTTCTCAGGAAGAGGTGGGCACAAGACACATCTGAGCCCCTTAGTATTCATAGGAGAATTGCTTaGACCAGGGAGATGGAGGTT +
Preference number: 2 (lower is better)
Translates to: PSLLRKRWAQDTSEPLSIHRRIA*TREMEV
Trigger: AACCTCCATCTCCCTGGTTCAAGCAATTCTCCTATG...AATACTAAGGGGCTCAGATGTGTCTTGTGCCCACCTCTTCCTGAGAAGAGATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
3UTR-3UTR TCA 90 bp TGCTCAAGTTTGCCTCCATTGGGCCCCGTTCAGAGTTTCTTGGGCTGCTTGTACCAGGTTACTAAAAGCTaGTTGTTAACGGAGGAAACA +
Preference number: 2 (lower is better)
Translates to: CSSLPPLGPVQSFLGCLYQVTKS*LLTEET
Trigger: TGTTTCCTCCGTTAACAATCAGCTTTTAGTAACCTG...GTACAAGCAGCCCAAGAAACTCTGAACGGGGCCCAATGGAGGCAAACTTGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
3UTR-3UTR TCA 90 bp TCAGAGTTTCTTGGGCTGCTTGTACTAGTCACAGCTCCACTTCCATCTCTTCTCCATAGGAGAATTGCTTaGACCAGGGAGATGGAGGTT +
Preference number: 2 (lower is better)
Translates to: SEFLGLLVLVTAPLPSLLHRRIA*TREMEV
Trigger: AACCTCCATCTCCCTGGTTCAAGCAATTCTCCTATG...GAGAAGAGATGGAAGTGGAGCTGTGACTAGTACAAGCAGCCCAAGAAACTCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
3UTR-3UTR TCA 90 bp TGTACCAGAAAAGAATGCCCCTCTTTCGAACTTTCAAACAGTTGGGATTATTTTGGCGGGTGGATCCCCTaGGGTCAGGAGTTTGAGACC +
Preference number: 2 (lower is better)
Translates to: CTRKECPSFELSNSWDYFGGWIP*GQEFET
Trigger: GGTCTCAAACTCCTGACCTCAGGGGATCCACCCGCC...AAAATAATCCCAACTGTTTGAAAGTTCGAAAGAGGGGCATTCTTTTCTGGTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
3UTR-3UTR TCA 90 bp CCATCTCTTCTCAGGAAGAGGTGGGCACAAGACACATCTGAGCCCCTTAGTATTAGCCCACTTAGAAGCTaGATAGAAAGAATGGGAAGC +
Preference number: 2 (lower is better)
Translates to: PSLLRKRWAQDTSEPLSISPLRS*IERMGS
Trigger: GCTTCCCATTCTTTCTATTCAGCTTCTAAGTGGGCT...AATACTAAGGGGCTCAGATGTGTCTTGTGCCCACCTCTTCCTGAGAAGAGATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
3UTR-3UTR TCA 90 bp CCATCTCTTCTCAGGAAGAGGTGGGCACAAGACACATCTGAGCCCCTTAGTATTAGAGGAGAGCACAAATaGATAGCCCACTTAGAAGCT +
Preference number: 2 (lower is better)
Translates to: PSLLRKRWAQDTSEPLSIRGEHK*IAHLEA
Trigger: AGCTTCTAAGTGGGCTATTCATTTGTGCTCTCCTCT...AATACTAAGGGGCTCAGATGTGTCTTGTGCCCACCTCTTCCTGAGAAGAGATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
3UTR-3UTR TCA 90 bp TGCTCAAGTTTGCCTCCATTGGGCCCCGTTCAGAGTTTCTTGGGCTGCTTGTACGGCTATTTCCCCAAATaGTTGACAAAGTGCAAAACA +
Preference number: 2 (lower is better)
Translates to: CSSLPPLGPVQSFLGCLYGYFPK*LTKCKT
Trigger: TGTTTTGCACTTTGTCAATCATTTGGGGAAATAGCC...GTACAAGCAGCCCAAGAAACTCTGAACGGGGCCCAATGGAGGCAAACTTGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
3UTR-3UTR CCA 90 bp AATGCCAAGGAAAACCATTCCGTTTTGAGTCTCTGGAGCCTGAACTCTCACCATCAAGTTTGCCTCCATTaGGCCCCGTTCAGAGTTTCT +
Preference number: 2 (lower is better)
Translates to: NAKENHSVLSLWSLNSHHQVCLH*APFRVS
Trigger: AGAAACTCTGAACGGGGCCCAATGGAGGCAAACTTG...ATGGTGAGAGTTCAGGCTCCAGAGACTCAAAACGGAATGGTTTTCCTTGGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
3UTR-3UTR TCA 90 bp AATGCCAAGGAAAACCATTCCGTTTTGAGTCTCTGGAGCCTGAACTCTCACCATAAAGGGCTCACAATCTaGGCTGGCCTTTTACAATGG +
Preference number: 2 (lower is better)
Translates to: NAKENHSVLSLWSLNSHHKGLTI*AGLLQW
Trigger: CCATTGTAAAAGGCCAGCTCAGATTGTGAGCCCTTT...ATGGTGAGAGTTCAGGCTCCAGAGACTCAAAACGGAATGGTTTTCCTTGGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
3UTR-3UTR TCA 90 bp AATGCCAAGGAAAACCATTCCGTTTTGAGTCTCTGGAGCCTGAACTCTCACCATAGCCCCTTAGTATTGTaGTGGTGGCCAGGAAATGAT +
Preference number: 2 (lower is better)
Translates to: NAKENHSVLSLWSLNSHHSPLVL*WWPGND
Trigger: ATCATTTCCTGGCCACCATCACAATACTAAGGGGCT...ATGGTGAGAGTTCAGGCTCCAGAGACTCAAAACGGAATGGTTTTCCTTGGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
3UTR-3UTR CCA 90 bp TTCAGAGTTTCTTGGGCTGCTTGTACTAGTCACAGCTCCACTTCCATCTCTTCTATAGTCCCAGCTACTTaGGAGGCTGACATAGGAGAA +
Preference number: 2 (lower is better)
Translates to: FRVSWAACTSHSSTSISSIVPAT*EADIGE
Trigger: TTCTCCTATGTCAGCCTCCCAAGTAGCTGGGACTAT...AGAAGAGATGGAAGTGGAGCTGTGACTAGTACAAGCAGCCCAAGAAACTCTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
3UTR-3UTR TCA 90 bp CATCTCTTCTCAGGAAGAGGTGGGCACAAGACACATCTGAGCCCCTTAGTATTGTTGGAAGCTAAAAACTaGGATAAAGTACAGGCCATG +
Preference number: 2 (lower is better)
Translates to: HLFSGRGGHKTHLSPLVLLEAKN*DKVQAM
Trigger: CATGGCCTGTACTTTATCTCAGTTTTTAGCTTCCAA...CAATACTAAGGGGCTCAGATGTGTCTTGTGCCCACCTCTTCCTGAGAAGAGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324570.9
ENST00000396559.5
ENST00000568027.5
3UTR-3UTR TCA 90 bp GAGTTTCTTGGGCTGCTTGTACTAGTCACAGCTCCACTTCCATCTCTTCTCAGGCAGGTTACTAAAAGCTaGTTGTTAACGGAGGAAACA +
Preference number: 2 (lower is better)
Translates to: EFLGLLVLVTAPLPSLLRQVTKS*LLTEET
Trigger: TGTTTCCTCCGTTAACAATCAGCTTTTAGTAACCTG...CCTGAGAAGAGATGGAAGTGGAGCTGTGACTAGTACAAGCAGCCCAAGAAACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
3UTR-3UTR TCA 90 bp AATGCCAAGGAAAACCATTCCGTTTTGAGTCTCTGGAGCCTGAACTCTCACCATAGCCCACTTAGAAGCTaGATAGAAAGAATGGGAAGC +
Preference number: 2 (lower is better)
Translates to: NAKENHSVLSLWSLNSHHSPLRS*IERMGS
Trigger: GCTTCCCATTCTTTCTATTCAGCTTCTAAGTGGGCT...ATGGTGAGAGTTCAGGCTCCAGAGACTCAAAACGGAATGGTTTTCCTTGGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
3UTR-3UTR TCA 90 bp AATTATTTGCTCAAGTTTGCCTCCATTGGGCCCCGTTCAGAGTTTCTTGGGCTGTTGGAAGCTAAAAACTaGGATAAAGTACAGGCCATG +
Preference number: 2 (lower is better)
Translates to: NYLLKFASIGPRSEFLGLLEAKN*DKVQAM
Trigger: CATGGCCTGTACTTTATCTCAGTTTTTAGCTTCCAA...CAGCCCAAGAAACTCTGAACGGGGCCCAATGGAGGCAAACTTGAGCAAATAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324570.9
ENST00000396559.5
ENST00000568027.5
3UTR-3UTR TCA 90 bp TCAGAGTTTCTTGGGCTGCTTGTACTAGTCACAGCTCCACTTCCATCTCTTCTCCAGGTTACTAAAAGCTaGTTGTTAACGGAGGAAACA +
Preference number: 2 (lower is better)
Translates to: SEFLGLLVLVTAPLPSLLQVTKS*LLTEET
Trigger: TGTTTCCTCCGTTAACAATCAGCTTTTAGTAACCTG...GAGAAGAGATGGAAGTGGAGCTGTGACTAGTACAAGCAGCCCAAGAAACTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
3UTR-3UTR TCA 90 bp CACCATGTACCAGAAAAGAATGCCCCTCTTTCGAACTTTCAAACAGTTGGGATTCATAGGAGAATTGCTTaGACCAGGGAGATGGAGGTT +
Preference number: 2 (lower is better)
Translates to: HHVPEKNAPLSNFQTVGIHRRIA*TREMEV
Trigger: AACCTCCATCTCCCTGGTTCAAGCAATTCTCCTATG...AATCCCAACTGTTTGAAAGTTCGAAAGAGGGGCATTCTTTTCTGGTACATGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
3UTR-3UTR TCA 90 bp AATTATTTGCTCAAGTTTGCCTCCATTGGGCCCCGTTCAGAGTTTCTTGGGCTGGGCTATTTCCCCAAATaGTTGACAAAGTGCAAAACA +
Preference number: 2 (lower is better)
Translates to: NYLLKFASIGPRSEFLGLGYFPK*LTKCKT
Trigger: TGTTTTGCACTTTGTCAATCATTTGGGGAAATAGCC...CAGCCCAAGAAACTCTGAACGGGGCCCAATGGAGGCAAACTTGAGCAAATAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
3UTR-3UTR TCA 90 bp CACCATGTACCAGAAAAGAATGCCCCTCTTTCGAACTTTCAAACAGTTGGGATTAGCCCCTTAGTATTGTaGTGGTGGCCAGGAAATGAT +
Preference number: 2 (lower is better)
Translates to: HHVPEKNAPLSNFQTVGISPLVL*WWPGND
Trigger: ATCATTTCCTGGCCACCATCACAATACTAAGGGGCT...AATCCCAACTGTTTGAAAGTTCGAAAGAGGGGCATTCTTTTCTGGTACATGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
3UTR-3UTR GCA 90 bp CACCATGTACCAGAAAAGAATGCCCCTCTTTCGAACTTTCAAACAGTTGGGATTTTATTTGCTCAAGTTTaGCTCCATTGGGCCCCGTTC +
Preference number: 2 (lower is better)
Translates to: HHVPEKNAPLSNFQTVGILFAQV*LHWAPF
Trigger: GAACGGGGCCCAATGGAGGCAAACTTGAGCAAATAA...AATCCCAACTGTTTGAAAGTTCGAAAGAGGGGCATTCTTTTCTGGTACATGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
3UTR-3UTR GCA 90 bp AGTCTCTGGAGCCTGAACTCTCACCATGTACCAGAAAAGAATGCCCCTCTTTCGATCATCCCAATTATTTaGTCAAGTTTGCCTCCATTG +
Preference number: 2 (lower is better)
Translates to: SLWSLNSHHVPEKNAPLSIIPII*SSLPPL
Trigger: CAATGGAGGCAAACTTGAGCAAATAATTGGGATGAT...CGAAAGAGGGGCATTCTTTTCTGGTACATGGTGAGAGTTCAGGCTCCAGAGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
3UTR-3UTR TCA 90 bp CCATGTACCAGAAAAGAATGCCCCTCTTTCGAACTTTCAAACAGTTGGGATTATAAAGGGCTCACAATCTaGGCTGGCCTTTTACAATGG +
Preference number: 2 (lower is better)
Translates to: PCTRKECPSFELSNSWDYKGLTI*AGLLQW
Trigger: CCATTGTAAAAGGCCAGCTCAGATTGTGAGCCCTTT...ATAATCCCAACTGTTTGAAAGTTCGAAAGAGGGGCATTCTTTTCTGGTACATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
3UTR-3UTR GCA 90 bp TGTACCAGAAAAGAATGCCCCTCTTTCGAACTTTCAAACAGTTGGGATTATTTTCAGGGAGATGGAGGTTaGAGTGACCACTGTACTCCA +
Preference number: 2 (lower is better)
Translates to: CTRKECPSFELSNSWDYFQGDGG*SDHCTP
Trigger: TGGAGTACAGTGGTCACTGCAACCTCCATCTCCCTG...AAAATAATCCCAACTGTTTGAAAGTTCGAAAGAGGGGCATTCTTTTCTGGTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
3UTR-3UTR GCA 90 bp TCCCAATTATTTGCTCAAGTTTGCCTCCATTGGGCCCCGTTCAGAGTTTCTTGGATCATCCCAATTATTTaGTCAAGTTTGCCTCCATTG +
Preference number: 2 (lower is better)
Translates to: SQLFAQVCLHWAPFRVSWIIPII*SSLPPL
Trigger: CAATGGAGGCAAACTTGAGCAAATAATTGGGATGAT...CCAAGAAACTCTGAACGGGGCCCAATGGAGGCAAACTTGAGCAAATAATTGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
3UTR-3UTR CCA 90 bp CCATGTACCAGAAAAGAATGCCCCTCTTTCGAACTTTCAAACAGTTGGGATTATATAGTCCCAGCTACTTaGGAGGCTGACATAGGAGAA +
Preference number: 2 (lower is better)
Translates to: PCTRKECPSFELSNSWDYIVPAT*EADIGE
Trigger: TTCTCCTATGTCAGCCTCCCAAGTAGCTGGGACTAT...ATAATCCCAACTGTTTGAAAGTTCGAAAGAGGGGCATTCTTTTCTGGTACATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
3UTR-3UTR TCA 90 bp CCATGTACCAGAAAAGAATGCCCCTCTTTCGAACTTTCAAACAGTTGGGATTATAGCCCACTTAGAAGCTaGATAGAAAGAATGGGAAGC +
Preference number: 2 (lower is better)
Translates to: PCTRKECPSFELSNSWDYSPLRS*IERMGS
Trigger: GCTTCCCATTCTTTCTATTCAGCTTCTAAGTGGGCT...ATAATCCCAACTGTTTGAAAGTTCGAAAGAGGGGCATTCTTTTCTGGTACATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
3UTR-3UTR TCA 90 bp CCATGTACCAGAAAAGAATGCCCCTCTTTCGAACTTTCAAACAGTTGGGATTATAGAGGAGAGCACAAATaGATAGCCCACTTAGAAGCT +
Preference number: 2 (lower is better)
Translates to: PCTRKECPSFELSNSWDYRGEHK*IAHLEA
Trigger: AGCTTCTAAGTGGGCTATTCATTTGTGCTCTCCTCT...ATAATCCCAACTGTTTGAAAGTTCGAAAGAGGGGCATTCTTTTCTGGTACATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
3UTR-3UTR CCA 90 bp TGTACCAGAAAAGAATGCCCCTCTTTCGAACTTTCAAACAGTTGGGATTATTTTCTTCTCAGGAAGAGGTaGGCACAAGACACATCTGAG +
Preference number: 2 (lower is better)
Translates to: CTRKECPSFELSNSWDYFLLRKR*AQDTSE
Trigger: CTCAGATGTGTCTTGTGCCCACCTCTTCCTGAGAAG...AAAATAATCCCAACTGTTTGAAAGTTCGAAAGAGGGGCATTCTTTTCTGGTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
3UTR-3UTR TCA 90 bp CACCATGTACCAGAAAAGAATGCCCCTCTTTCGAACTTTCAAACAGTTGGGATTGGCTATTTCCCCAAATaGTTGACAAAGTGCAAAACA +
Preference number: 2 (lower is better)
Translates to: HHVPEKNAPLSNFQTVGIGYFPK*LTKCKT
Trigger: TGTTTTGCACTTTGTCAATCATTTGGGGAAATAGCC...AATCCCAACTGTTTGAAAGTTCGAAAGAGGGGCATTCTTTTCTGGTACATGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
3UTR-3UTR TCA 90 bp TGTACCAGAAAAGAATGCCCCTCTTTCGAACTTTCAAACAGTTGGGATTATTTTAGCCCCTTAGTATTGTaGTGGTGGCCAGGAAATGAT +
Preference number: 2 (lower is better)
Translates to: CTRKECPSFELSNSWDYFSPLVL*WWPGND
Trigger: ATCATTTCCTGGCCACCATCACAATACTAAGGGGCT...AAAATAATCCCAACTGTTTGAAAGTTCGAAAGAGGGGCATTCTTTTCTGGTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
3UTR-3UTR GCA 90 bp CACCATGTACCAGAAAAGAATGCCCCTCTTTCGAACTTTCAAACAGTTGGGATTTCAAAGGTGGACAAATaGATTCTCAACTCAAACAGG +
Preference number: 2 (lower is better)
Translates to: HHVPEKNAPLSNFQTVGISKVDK*ILNSNR
Trigger: CCTGTTTGAGTTGAGAATGCATTTGTCCACCTTTGA...AATCCCAACTGTTTGAAAGTTCGAAAGAGGGGCATTCTTTTCTGGTACATGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
3UTR-3UTR GCA 90 bp GTACCAGAAAAGAATGCCCCTCTTTCGAACTTTCAAACAGTTGGGATTATTTTTTTATTTGCTCAAGTTTaGCTCCATTGGGCCCCGTTC +
Preference number: 2 (lower is better)
Translates to: VPEKNAPLSNFQTVGIIFLFAQV*LHWAPF
Trigger: GAACGGGGCCCAATGGAGGCAAACTTGAGCAAATAA...AAAAATAATCCCAACTGTTTGAAAGTTCGAAAGAGGGGCATTCTTTTCTGGTAC
41% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
3UTR-3UTR CCA 90 bp TGTACCAGAAAAGAATGCCCCTCTTTCGAACTTTCAAACAGTTGGGATTATTTTATAGTCCCAGCTACTTaGGAGGCTGACATAGGAGAA +
Preference number: 2 (lower is better)
Translates to: CTRKECPSFELSNSWDYFIVPAT*EADIGE
Trigger: TTCTCCTATGTCAGCCTCCCAAGTAGCTGGGACTAT...AAAATAATCCCAACTGTTTGAAAGTTCGAAAGAGGGGCATTCTTTTCTGGTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
3UTR-3UTR CCA 90 bp TGTACCAGAAAAGAATGCCCCTCTTTCGAACTTTCAAACAGTTGGGATTATTTTCCGTTCAGAGTTTCTTaGGCTGCTTGTACTAGTCAC +
Preference number: 2 (lower is better)
Translates to: CTRKECPSFELSNSWDYFPFRVS*AACTSH
Trigger: GTGACTAGTACAAGCAGCCCAAGAAACTCTGAACGG...AAAATAATCCCAACTGTTTGAAAGTTCGAAAGAGGGGCATTCTTTTCTGGTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
3UTR-3UTR TCA 90 bp CCATGTACCAGAAAAGAATGCCCCTCTTTCGAACTTTCAAACAGTTGGGATTATCAGGTTACTAAAAGCTaGTTGTTAACGGAGGAAACA +
Preference number: 2 (lower is better)
Translates to: PCTRKECPSFELSNSWDYQVTKS*LLTEET
Trigger: TGTTTCCTCCGTTAACAATCAGCTTTTAGTAACCTG...ATAATCCCAACTGTTTGAAAGTTCGAAAGAGGGGCATTCTTTTCTGGTACATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
3UTR-3UTR TCA 90 bp GTACCAGAAAAGAATGCCCCTCTTTCGAACTTTCAAACAGTTGGGATTATTTTTAGAGGAGAGCACAAATaGATAGCCCACTTAGAAGCT +
Preference number: 2 (lower is better)
Translates to: VPEKNAPLSNFQTVGIIFRGEHK*IAHLEA
Trigger: AGCTTCTAAGTGGGCTATTCATTTGTGCTCTCCTCT...AAAAATAATCCCAACTGTTTGAAAGTTCGAAAGAGGGGCATTCTTTTCTGGTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
3UTR-3UTR TCA 90 bp TGTACCAGAAAAGAATGCCCCTCTTTCGAACTTTCAAACAGTTGGGATTATTTTCAGGTTACTAAAAGCTaGTTGTTAACGGAGGAAACA +
Preference number: 2 (lower is better)
Translates to: CTRKECPSFELSNSWDYFQVTKS*LLTEET
Trigger: TGTTTCCTCCGTTAACAATCAGCTTTTAGTAACCTG...AAAATAATCCCAACTGTTTGAAAGTTCGAAAGAGGGGCATTCTTTTCTGGTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
3UTR-3UTR TCA 90 bp TGTACCAGAAAAGAATGCCCCTCTTTCGAACTTTCAAACAGTTGGGATTATTTTGGCTATTTCCCCAAATaGTTGACAAAGTGCAAAACA +
Preference number: 2 (lower is better)
Translates to: CTRKECPSFELSNSWDYFGYFPK*LTKCKT
Trigger: TGTTTTGCACTTTGTCAATCATTTGGGGAAATAGCC...AAAATAATCCCAACTGTTTGAAAGTTCGAAAGAGGGGCATTCTTTTCTGGTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
3UTR-3UTR GCA 90 bp TGTACCAGAAAAGAATGCCCCTCTTTCGAACTTTCAAACAGTTGGGATTATTTTTCAAAGGTGGACAAATaGATTCTCAACTCAAACAGG +
Preference number: 2 (lower is better)
Translates to: CTRKECPSFELSNSWDYFSKVDK*ILNSNR
Trigger: CCTGTTTGAGTTGAGAATGCATTTGTCCACCTTTGA...AAAATAATCCCAACTGTTTGAAAGTTCGAAAGAGGGGCATTCTTTTCTGGTACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
3UTR-3UTR GCA 90 bp GTACCAGAAAAGAATGCCCCTCTTTCGAACTTTCAAACAGTTGGGATTATTTTTTCAAAGGTGGACAAATaGATTCTCAACTCAAACAGG +
Preference number: 2 (lower is better)
Translates to: VPEKNAPLSNFQTVGIIFSKVDK*ILNSNR
Trigger: CCTGTTTGAGTTGAGAATGCATTTGTCCACCTTTGA...AAAAATAATCCCAACTGTTTGAAAGTTCGAAAGAGGGGCATTCTTTTCTGGTAC
38% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
3UTR CAA 90 bp AGCCTCAAATCAAAGGTGGACAAATGCATTCTCAACTCAAACAGGTaGGGTAATGCTTTCATAAGATACATTATGTTTTTGTGTACACAG +
Preference number: 2 (lower is better)
Translates to: SLKSKVDKCILNSNR*GNAFIRYIMFLCTQ
Trigger: CTGTGTACACAAAAACATAATGTATCTTATGAAAGCATTACCCAACCTGTTTGAGTTGAGAATGCATTTGTCCACCTTTGATTTGAGGCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
3UTR CCA 72 bp CAAGTTTGCCTCCATTGGGCCCCGTTCAGAGTTTCTTaGGCTGCTTGTACTAGTCACAGCTCCACTTCCATC +
Preference number: 3 (lower is better)
Translates to: QVCLHWAPFRVS*AACTSHSSTSI
Trigger: GATGGAAGTGGAGCTGTGACTAGTACAAGCAGCCCAAGAAACTCTGAACGGGGCCCAATGGAGGCAAACTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
3UTR-3UTR CAA 90 bp TCCCAATTATTTGCTCAAGTTTGCCTCCATTGGGCCCCGTTCAGAGTTTCTTGGTCAAGTTTGCCTCCATaGGGCCCCGTTCAGAGTTTC +
Preference number: 3 (lower is better)
Translates to: SQLFAQVCLHWAPFRVSWSSLPP*GPVQSF
Trigger: GAAACTCTGAACGGGGCCCAATGGAGGCAAACTTGA...CCAAGAAACTCTGAACGGGGCCCAATGGAGGCAAACTTGAGCAAATAATTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
3UTR-3UTR CAA 90 bp AGTCTCTGGAGCCTGAACTCTCACCATGTACCAGAAAAGAATGCCCCTCTTTCGATTATTTGCTCAAGTTaGCCTCCATTGGGCCCCGTT +
Preference number: 3 (lower is better)
Translates to: SLWSLNSHHVPEKNAPLSIICSS*PPLGPV
Trigger: AACGGGGCCCAATGGAGGCAAACTTGAGCAAATAAT...CGAAAGAGGGGCATTCTTTTCTGGTACATGGTGAGAGTTCAGGCTCCAGAGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
3UTR TCA 72 bp GGTGGGCACAAGACACATCTGAGCCCCTTAGTATTGTaGTGGTGGCCAGGAAATGATCAAAGGGTAGCATTT +
Preference number: 3 (lower is better)
Translates to: GGHKTHLSPLVL*WWPGNDQRVAF
Trigger: AAATGCTACCCTTTGATCATTTCCTGGCCACCATCACAATACTAAGGGGCTCAGATGTGTCTTGTGCCCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
3UTR-3UTR CAA 90 bp CCATCTCTTCTCAGGAAGAGGTGGGCACAAGACACATCTGAGCCCCTTAGTATTCAGTCACTAAAGGTATaGTTCACAATGCACCTCAGC +
Preference number: 3 (lower is better)
Translates to: PSLLRKRWAQDTSEPLSIQSLKV*FTMHLS
Trigger: GCTGAGGTGCATTGTGAACAATACCTTTAGTGACTG...AATACTAAGGGGCTCAGATGTGTCTTGTGCCCACCTCTTCCTGAGAAGAGATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
3UTR-3UTR CAA 90 bp GAGTTTCTTGGGCTGCTTGTACTAGTCACAGCTCCACTTCCATCTCTTCTCAGGCAGTCACTAAAGGTATaGTTCACAATGCACCTCAGC +
Preference number: 3 (lower is better)
Translates to: EFLGLLVLVTAPLPSLLRQSLKV*FTMHLS
Trigger: GCTGAGGTGCATTGTGAACAATACCTTTAGTGACTG...CCTGAGAAGAGATGGAAGTGGAGCTGTGACTAGTACAAGCAGCCCAAGAAACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
3UTR-3UTR CAA 90 bp TCCCAATTATTTGCTCAAGTTTGCCTCCATTGGGCCCCGTTCAGAGTTTCTTGGATTATTTGCTCAAGTTaGCCTCCATTGGGCCCCGTT +
Preference number: 3 (lower is better)
Translates to: SQLFAQVCLHWAPFRVSWIICSS*PPLGPV
Trigger: AACGGGGCCCAATGGAGGCAAACTTGAGCAAATAAT...CCAAGAAACTCTGAACGGGGCCCAATGGAGGCAAACTTGAGCAAATAATTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
3UTR-3UTR CAA 90 bp TCAGAGTTTCTTGGGCTGCTTGTACTAGTCACAGCTCCACTTCCATCTCTTCTCCAGTCACTAAAGGTATaGTTCACAATGCACCTCAGC +
Preference number: 3 (lower is better)
Translates to: SEFLGLLVLVTAPLPSLLQSLKV*FTMHLS
Trigger: GCTGAGGTGCATTGTGAACAATACCTTTAGTGACTG...GAGAAGAGATGGAAGTGGAGCTGTGACTAGTACAAGCAGCCCAAGAAACTCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
3UTR-3UTR CAA 90 bp CGTTCAGAGTTTCTTGGGCTGCTTGTACTAGTCACAGCTCCACTTCCATCTCTTCAGTCACTAAAGGTATaGTTCACAATGCACCTCAGC +
Preference number: 3 (lower is better)
Translates to: RSEFLGLLVLVTAPLPSLQSLKV*FTMHLS
Trigger: GCTGAGGTGCATTGTGAACAATACCTTTAGTGACTG...AAGAGATGGAAGTGGAGCTGTGACTAGTACAAGCAGCCCAAGAAACTCTGAACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
3UTR-3UTR CAA 90 bp AATGCCAAGGAAAACCATTCCGTTTTGAGTCTCTGGAGCCTGAACTCTCACCATATTATTTGCTCAAGTTaGCCTCCATTGGGCCCCGTT +
Preference number: 3 (lower is better)
Translates to: NAKENHSVLSLWSLNSHHIICSS*PPLGPV
Trigger: AACGGGGCCCAATGGAGGCAAACTTGAGCAAATAAT...ATGGTGAGAGTTCAGGCTCCAGAGACTCAAAACGGAATGGTTTTCCTTGGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
3UTR-3UTR CAA 90 bp AATGCCAAGGAAAACCATTCCGTTTTGAGTCTCTGGAGCCTGAACTCTCACCATAACCTGGACTGCATTTaGTGCCAATGGGGTTGTTTC +
Preference number: 3 (lower is better)
Translates to: NAKENHSVLSLWSLNSHHNLDCI*CQWGCF
Trigger: GAAACAACCCCATTGGCACAAAATGCAGTCCAGGTT...ATGGTGAGAGTTCAGGCTCCAGAGACTCAAAACGGAATGGTTTTCCTTGGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000568027.5
3UTR-3UTR CAA 90 bp AATGCCAAGGAAAACCATTCCGTTTTGAGTCTCTGGAGCCTGAACTCTCACCATATGGGGTTGTTTCCTTaGAGTTTGAAGCAGCTTTCG +
Preference number: 3 (lower is better)
Translates to: NAKENHSVLSLWSLNSHHMGLFP*SLKQLS
Trigger: CGAAAGCTGCTTCAAACTCAAAGGAAACAACCCCAT...ATGGTGAGAGTTCAGGCTCCAGAGACTCAAAACGGAATGGTTTTCCTTGGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000568027.5
3UTR-3UTR CAA 90 bp AATTATTTGCTCAAGTTTGCCTCCATTGGGCCCCGTTCAGAGTTTCTTGGGCTGTTTGTGCCAATGGGGTaGTTTCCTTTGAGTTTGAAG +
Preference number: 3 (lower is better)
Translates to: NYLLKFASIGPRSEFLGLFVPMG*FPLSLK
Trigger: CTTCAAACTCAAAGGAAACAACCCCATTGGCACAAA...CAGCCCAAGAAACTCTGAACGGGGCCCAATGGAGGCAAACTTGAGCAAATAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568027.5
3UTR GCA 72 bp CTGGAGCCTGAACTCTCACCATGTACCAGAAAAGAATaGCCCTCTTTCGAACTTTCAAACAGTTGGGATTAT +
Preference number: 3 (lower is better)
Translates to: LEPELSPCTRKE*PSFELSNSWDY
Trigger: ATAATCCCAACTGTTTGAAAGTTCGAAAGAGGGGCATTCTTTTCTGGTACATGGTGAGAGTTCAGGCTCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
3UTR CCA 72 bp TTAGGAAATCAGCAAACTAAAGCCTCAAATCAAAGGTaGACAAATGCATTCTCAACTCAAACAGGTTGGGTA +
Preference number: 3 (lower is better)
Translates to: LGNQQTKASNQR*TNAFSTQTGWV
Trigger: TACCCAACCTGTTTGAGTTGAGAATGCATTTGTCCACCTTTGATTTGAGGCTTTAGTTTGCTGATTTCCTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR TCA 90 bp CATCTCTTCTCAGGAAGAGGTGGGCACAAGACACATCTGAGCCCCTTAGTATTGGGCGGGTGGATCCCCTaGGGTCAGGAGTTTGAGACC +
Preference number: 4 (lower is better)
Translates to: HLFSGRGGHKTHLSPLVLGGWIP*GQEFET
Trigger: GGTCTCAAACTCCTGACCTCAGGGGATCCACCCGCC...CAATACTAAGGGGCTCAGATGTGTCTTGTGCCCACCTCTTCCTGAGAAGAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR TCA 90 bp GAGTTTCTTGGGCTGCTTGTACTAGTCACAGCTCCACTTCCATCTCTTCTCAGGGGCGGGTGGATCCCCTaGGGTCAGGAGTTTGAGACC +
Preference number: 4 (lower is better)
Translates to: EFLGLLVLVTAPLPSLLRGGWIP*GQEFET
Trigger: GGTCTCAAACTCCTGACCTCAGGGGATCCACCCGCC...CCTGAGAAGAGATGGAAGTGGAGCTGTGACTAGTACAAGCAGCCCAAGAAACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR TCA 90 bp CCATCTCTTCTCAGGAAGAGGTGGGCACAAGACACATCTGAGCCCCTTAGTATTGGCGGGTGGATCCCCTaGGGTCAGGAGTTTGAGACC +
Preference number: 4 (lower is better)
Translates to: PSLLRKRWAQDTSEPLSIGGWIP*GQEFET
Trigger: GGTCTCAAACTCCTGACCTCAGGGGATCCACCCGCC...AATACTAAGGGGCTCAGATGTGTCTTGTGCCCACCTCTTCCTGAGAAGAGATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR TCA 90 bp TGCTCAAGTTTGCCTCCATTGGGCCCCGTTCAGAGTTTCTTGGGCTGCTTGTACGCACTCCAGCAAGGGTaGCAGAGTGAGACCGTGTCT +
Preference number: 4 (lower is better)
Translates to: CSSLPPLGPVQSFLGCLYALQQG*QSETVS
Trigger: AGACACGGTCTCACTCTGTCACCCTTGCTGGAGTGC...GTACAAGCAGCCCAAGAAACTCTGAACGGGGCCCAATGGAGGCAAACTTGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396559.5
ENST00000396560.6
CDS-3UTR TCA 90 bp CATCTCTTCTCAGGAAGAGGTGGGCACAAGACACATCTGAGCCCCTTAGTATTGGGTGCACTCCAGGGATaGTCTGGCCCTCAGTCAAGG +
Preference number: 4 (lower is better)
Translates to: HLFSGRGGHKTHLSPLVLGALQG*SGPQSR
Trigger: CCTTGACTGAGGGCCAGATCATCCCTGGAGTGCACC...CAATACTAAGGGGCTCAGATGTGTCTTGTGCCCACCTCTTCCTGAGAAGAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR TCA 90 bp AGTCTCTGGAGCCTGAACTCTCACCATGTACCAGAAAAGAATGCCCCTCTTTCGGGTGCACTCCAGGGATaGTCTGGCCCTCAGTCAAGG +
Preference number: 4 (lower is better)
Translates to: SLWSLNSHHVPEKNAPLSGALQG*SGPQSR
Trigger: CCTTGACTGAGGGCCAGATCATCCCTGGAGTGCACC...CGAAAGAGGGGCATTCTTTTCTGGTACATGGTGAGAGTTCAGGCTCCAGAGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR GCA 90 bp TGCTCAAGTTTGCCTCCATTGGGCCCCGTTCAGAGTTTCTTGGGCTGCTTGTACGCCGTGATCTGTGATTaGACCACTGCACTCCAGCAA +
Preference number: 4 (lower is better)
Translates to: CSSLPPLGPVQSFLGCLYAVICD*TTALQQ
Trigger: TTGCTGGAGTGCAGTGGTGCAATCACAGATCACGGC...GTACAAGCAGCCCAAGAAACTCTGAACGGGGCCCAATGGAGGCAAACTTGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR TCA 90 bp AATTATTTGCTCAAGTTTGCCTCCATTGGGCCCCGTTCAGAGTTTCTTGGGCTGGCACTCCAGCAAGGGTaGCAGAGTGAGACCGTGTCT +
Preference number: 4 (lower is better)
Translates to: NYLLKFASIGPRSEFLGLALQQG*QSETVS
Trigger: AGACACGGTCTCACTCTGTCACCCTTGCTGGAGTGC...CAGCCCAAGAAACTCTGAACGGGGCCCAATGGAGGCAAACTTGAGCAAATAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396559.5
ENST00000396560.6
CDS-3UTR TCA 90 bp TGTGCCAATGGGGTTGTTTCCTTTGAGTTTGAAGCAGCTTTCGAATGTGACTCCGCACTCCAGCAAGGGTaGCAGAGTGAGACCGTGTCT +
Preference number: 4 (lower is better)
Translates to: CANGVVSFEFEAAFECDSALQQG*QSETVS
Trigger: AGACACGGTCTCACTCTGTCACCCTTGCTGGAGTGC...GGAGTCACATTCGAAAGCTGCTTCAAACTCAAAGGAAACAACCCCATTGGCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535850.5
CDS-3UTR GCA 90 bp TTTGCCTCCATTGGGCCCCGTTCAGAGTTTCTTGGGCTGCTTGTACTAGTCACATTCAGCATCTCTACTTaGTTCCGGCAACTTAGGGGC +
Preference number: 4 (lower is better)
Translates to: FASIGPRSEFLGLLVLVTFSIST*FRQLRG
Trigger: GCCCCTAAGTTGCCGGAAGCAAGTAGAGATGCTGAA...TGTGACTAGTACAAGCAGCCCAAGAAACTCTGAACGGGGCCCAATGGAGGCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR GCA 90 bp GAGTTTCTTGGGCTGCTTGTACTAGTCACAGCTCCACTTCCATCTCTTCTCAGGGCCGTGATCTGTGATTaGACCACTGCACTCCAGCAA +
Preference number: 4 (lower is better)
Translates to: EFLGLLVLVTAPLPSLLRAVICD*TTALQQ
Trigger: TTGCTGGAGTGCAGTGGTGCAATCACAGATCACGGC...CCTGAGAAGAGATGGAAGTGGAGCTGTGACTAGTACAAGCAGCCCAAGAAACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR TCA 90 bp AATTATTTGCTCAAGTTTGCCTCCATTGGGCCCCGTTCAGAGTTTCTTGGGCTGAAACCCGTTTCACTTTaGGCTCAGGCTTCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: NYLLKFASIGPRSEFLGLKPVSL*AQASGE
Trigger: CTCCCCAGAAGCCTGAGCTCAAAGTGAAACGGGTTT...CAGCCCAAGAAACTCTGAACGGGGCCCAATGGAGGCAAACTTGAGCAAATAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR TCA 90 bp CGTTCAGAGTTTCTTGGGCTGCTTGTACTAGTCACAGCTCCACTTCCATCTCTTAAACCCGTTTCACTTTaGGCTCAGGCTTCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: RSEFLGLLVLVTAPLPSLKPVSL*AQASGE
Trigger: CTCCCCAGAAGCCTGAGCTCAAAGTGAAACGGGTTT...AAGAGATGGAAGTGGAGCTGTGACTAGTACAAGCAGCCCAAGAAACTCTGAACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR TCA 90 bp TTTGCCTCCATTGGGCCCCGTTCAGAGTTTCTTGGGCTGCTTGTACTAGTCACAAAAGGGCTCACAATCTaGGCTGGCCTTTTACAATGG +
Preference number: 4 (lower is better)
Translates to: FASIGPRSEFLGLLVLVTKGLTI*AGLLQW
Trigger: CCATTGTAAAAGGCCAGCTCAGATTGTGAGCCCTTT...TGTGACTAGTACAAGCAGCCCAAGAAACTCTGAACGGGGCCCAATGGAGGCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR TCA 90 bp CACCATGTACCAGAAAAGAATGCCCCTCTTTCGAACTTTCAAACAGTTGGGATTGGTGCACTCCAGGGATaGTCTGGCCCTCAGTCAAGG +
Preference number: 4 (lower is better)
Translates to: HHVPEKNAPLSNFQTVGIGALQG*SGPQSR
Trigger: CCTTGACTGAGGGCCAGATCATCCCTGGAGTGCACC...AATCCCAACTGTTTGAAAGTTCGAAAGAGGGGCATTCTTTTCTGGTACATGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR TCA 90 bp TTTGCCTCCATTGGGCCCCGTTCAGAGTTTCTTGGGCTGCTTGTACTAGTCACACATAGGAGAATTGCTTaGACCAGGGAGATGGAGGTT +
Preference number: 4 (lower is better)
Translates to: FASIGPRSEFLGLLVLVTHRRIA*TREMEV
Trigger: AACCTCCATCTCCCTGGTTCAAGCAATTCTCCTATG...TGTGACTAGTACAAGCAGCCCAAGAAACTCTGAACGGGGCCCAATGGAGGCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR TCA 90 bp CCATGTACCAGAAAAGAATGCCCCTCTTTCGAACTTTCAAACAGTTGGGATTATGGCGGGTGGATCCCCTaGGGTCAGGAGTTTGAGACC +
Preference number: 4 (lower is better)
Translates to: PCTRKECPSFELSNSWDYGGWIP*GQEFET
Trigger: GGTCTCAAACTCCTGACCTCAGGGGATCCACCCGCC...ATAATCCCAACTGTTTGAAAGTTCGAAAGAGGGGCATTCTTTTCTGGTACATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR GCA 90 bp AATGGGGTTGTTTCCTTTGAGTTTGAAGCAGCTTTCGAATGTGACTCCAGGGGGCAGGGAGATGGAGGTTaGAGTGACCACTGTACTCCA +
Preference number: 4 (lower is better)
Translates to: NGVVSFEFEAAFECDSRGQGDGG*SDHCTP
Trigger: TGGAGTACAGTGGTCACTGCAACCTCCATCTCCCTG...CCCCCTGGAGTCACATTCGAAAGCTGCTTCAAACTCAAAGGAAACAACCCCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568027.5
CDS-3UTR CCA 90 bp CCATCTCTTCTCAGGAAGAGGTGGGCACAAGACACATCTGAGCCCCTTAGTATTCTTCTCAGGAAGAGGTaGGCACAAGACACATCTGAG +
Preference number: 4 (lower is better)
Translates to: PSLLRKRWAQDTSEPLSILLRKR*AQDTSE
Trigger: CTCAGATGTGTCTTGTGCCCACCTCTTCCTGAGAAG...AATACTAAGGGGCTCAGATGTGTCTTGTGCCCACCTCTTCCTGAGAAGAGATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR CCA 90 bp CATCTCTTCTCAGGAAGAGGTGGGCACAAGACACATCTGAGCCCCTTAGTATTGCAAGTTTGCCTCCATTaGGCCCCGTTCAGAGTTTCT +
Preference number: 4 (lower is better)
Translates to: HLFSGRGGHKTHLSPLVLQVCLH*APFRVS
Trigger: AGAAACTCTGAACGGGGCCCAATGGAGGCAAACTTG...CAATACTAAGGGGCTCAGATGTGTCTTGTGCCCACCTCTTCCTGAGAAGAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR CCA 90 bp AGTCTCTGGAGCCTGAACTCTCACCATGTACCAGAAAAGAATGCCCCTCTTTCGCAAGTTTGCCTCCATTaGGCCCCGTTCAGAGTTTCT +
Preference number: 4 (lower is better)
Translates to: SLWSLNSHHVPEKNAPLSQVCLH*APFRVS
Trigger: AGAAACTCTGAACGGGGCCCAATGGAGGCAAACTTG...CGAAAGAGGGGCATTCTTTTCTGGTACATGGTGAGAGTTCAGGCTCCAGAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR TCA 90 bp AGTCTCTGGAGCCTGAACTCTCACCATGTACCAGAAAAGAATGCCCCTCTTTCGGCTGAATCAAATGTCTaGCCTGTTCCAGGAATGCTG +
Preference number: 4 (lower is better)
Translates to: SLWSLNSHHVPEKNAPLSAESNV*PVPGML
Trigger: CAGCATTCCTGGAACAGGTCAGACATTTGATTCAGC...CGAAAGAGGGGCATTCTTTTCTGGTACATGGTGAGAGTTCAGGCTCCAGAGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR TCA 90 bp GAGTTTCTTGGGCTGCTTGTACTAGTCACAGCTCCACTTCCATCTCTTCTCAGGGCTGAATCAAATGTCTaGCCTGTTCCAGGAATGCTG +
Preference number: 4 (lower is better)
Translates to: EFLGLLVLVTAPLPSLLRAESNV*PVPGML
Trigger: CAGCATTCCTGGAACAGGTCAGACATTTGATTCAGC...CCTGAGAAGAGATGGAAGTGGAGCTGTGACTAGTACAAGCAGCCCAAGAAACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR TCA 90 bp TGTGCCAATGGGGTTGTTTCCTTTGAGTTTGAAGCAGCTTTCGAATGTGACTCCAAACCCGTTTCACTTTaGGCTCAGGCTTCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: CANGVVSFEFEAAFECDSKPVSL*AQASGE
Trigger: CTCCCCAGAAGCCTGAGCTCAAAGTGAAACGGGTTT...GGAGTCACATTCGAAAGCTGCTTCAAACTCAAAGGAAACAACCCCATTGGCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535850.5
ENST00000568027.5
CDS-3UTR TCA 90 bp CCATGTACCAGAAAAGAATGCCCCTCTTTCGAACTTTCAAACAGTTGGGATTATGGTGCACTCCAGGGATaGTCTGGCCCTCAGTCAAGG +
Preference number: 4 (lower is better)
Translates to: PCTRKECPSFELSNSWDYGALQG*SGPQSR
Trigger: CCTTGACTGAGGGCCAGATCATCCCTGGAGTGCACC...ATAATCCCAACTGTTTGAAAGTTCGAAAGAGGGGCATTCTTTTCTGGTACATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR TCA 90 bp TTTGCCTCCATTGGGCCCCGTTCAGAGTTTCTTGGGCTGCTTGTACTAGTCACAAGCCCACTTAGAAGCTaGATAGAAAGAATGGGAAGC +
Preference number: 4 (lower is better)
Translates to: FASIGPRSEFLGLLVLVTSPLRS*IERMGS
Trigger: GCTTCCCATTCTTTCTATTCAGCTTCTAAGTGGGCT...TGTGACTAGTACAAGCAGCCCAAGAAACTCTGAACGGGGCCCAATGGAGGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR TCA 90 bp CATCTCTTCTCAGGAAGAGGTGGGCACAAGACACATCTGAGCCCCTTAGTATTGAGCCCCTTAGTATTGTaGTGGTGGCCAGGAAATGAT +
Preference number: 4 (lower is better)
Translates to: HLFSGRGGHKTHLSPLVLSPLVL*WWPGND
Trigger: ATCATTTCCTGGCCACCATCACAATACTAAGGGGCT...CAATACTAAGGGGCTCAGATGTGTCTTGTGCCCACCTCTTCCTGAGAAGAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR TCA 90 bp GAGTTTCTTGGGCTGCTTGTACTAGTCACAGCTCCACTTCCATCTCTTCTCAGGAGCCCCTTAGTATTGTaGTGGTGGCCAGGAAATGAT +
Preference number: 4 (lower is better)
Translates to: EFLGLLVLVTAPLPSLLRSPLVL*WWPGND
Trigger: ATCATTTCCTGGCCACCATCACAATACTAAGGGGCT...CCTGAGAAGAGATGGAAGTGGAGCTGTGACTAGTACAAGCAGCCCAAGAAACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR GCA 90 bp TCAGAGTTTCTTGGGCTGCTTGTACTAGTCACAGCTCCACTTCCATCTCTTCTCTTCAGCATCTCTACTTaGTTCCGGCAACTTAGGGGC +
Preference number: 4 (lower is better)
Translates to: SEFLGLLVLVTAPLPSLLFSIST*FRQLRG
Trigger: GCCCCTAAGTTGCCGGAAGCAAGTAGAGATGCTGAA...GAGAAGAGATGGAAGTGGAGCTGTGACTAGTACAAGCAGCCCAAGAAACTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR GCA 90 bp TTTCTTGGGCTGCTTGTACTAGTCACAGCTCCACTTCCATCTCTTCTCAGGAAGTTCAGCATCTCTACTTaGTTCCGGCAACTTAGGGGC +
Preference number: 4 (lower is better)
Translates to: FLGLLVLVTAPLPSLLRKFSIST*FRQLRG
Trigger: GCCCCTAAGTTGCCGGAAGCAAGTAGAGATGCTGAA...CTTCCTGAGAAGAGATGGAAGTGGAGCTGTGACTAGTACAAGCAGCCCAAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR GCA 90 bp CCAATGGGGTTGTTTCCTTTGAGTTTGAAGCAGCTTTCGAATGTGACTCCAGGGTTCAGCATCTCTACTTaGTTCCGGCAACTTAGGGGC +
Preference number: 4 (lower is better)
Translates to: PMGLFPLSLKQLSNVTPGFSIST*FRQLRG
Trigger: GCCCCTAAGTTGCCGGAAGCAAGTAGAGATGCTGAA...CCCTGGAGTCACATTCGAAAGCTGCTTCAAACTCAAAGGAAACAACCCCATTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535850.5
ENST00000568027.5
CDS-3UTR GCA 90 bp AATGCCAAGGAAAACCATTCCGTTTTGAGTCTCTGGAGCCTGAACTCTCACCATCAGGGAGATGGAGGTTaGAGTGACCACTGTACTCCA +
Preference number: 4 (lower is better)
Translates to: NAKENHSVLSLWSLNSHHQGDGG*SDHCTP
Trigger: TGGAGTACAGTGGTCACTGCAACCTCCATCTCCCTG...ATGGTGAGAGTTCAGGCTCCAGAGACTCAAAACGGAATGGTTTTCCTTGGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR GCA 90 bp GAGTTTCTTGGGCTGCTTGTACTAGTCACAGCTCCACTTCCATCTCTTCTCAGGTTATTTGCTCAAGTTTaGCTCCATTGGGCCCCGTTC +
Preference number: 4 (lower is better)
Translates to: EFLGLLVLVTAPLPSLLRLFAQV*LHWAPF
Trigger: GAACGGGGCCCAATGGAGGCAAACTTGAGCAAATAA...CCTGAGAAGAGATGGAAGTGGAGCTGTGACTAGTACAAGCAGCCCAAGAAACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR GCA 90 bp CATCTCTTCTCAGGAAGAGGTGGGCACAAGACACATCTGAGCCCCTTAGTATTGTTATTTGCTCAAGTTTaGCTCCATTGGGCCCCGTTC +
Preference number: 4 (lower is better)
Translates to: HLFSGRGGHKTHLSPLVLLFAQV*LHWAPF
Trigger: GAACGGGGCCCAATGGAGGCAAACTTGAGCAAATAA...CAATACTAAGGGGCTCAGATGTGTCTTGTGCCCACCTCTTCCTGAGAAGAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR GCA 90 bp TGTGCCAATGGGGTTGTTTCCTTTGAGTTTGAAGCAGCTTTCGAATGTGACTCCGCCGTGATCTGTGATTaGACCACTGCACTCCAGCAA +
Preference number: 4 (lower is better)
Translates to: CANGVVSFEFEAAFECDSAVICD*TTALQQ
Trigger: TTGCTGGAGTGCAGTGGTGCAATCACAGATCACGGC...GGAGTCACATTCGAAAGCTGCTTCAAACTCAAAGGAAACAACCCCATTGGCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535850.5
ENST00000568027.5
CDS-3UTR GCA 90 bp TTCAGAGTTTCTTGGGCTGCTTGTACTAGTCACAGCTCCACTTCCATCTCTTCTGCCGTGATCTGTGATTaGACCACTGCACTCCAGCAA +
Preference number: 4 (lower is better)
Translates to: FRVSWAACTSHSSTSISSAVICD*TTALQQ
Trigger: TTGCTGGAGTGCAGTGGTGCAATCACAGATCACGGC...AGAAGAGATGGAAGTGGAGCTGTGACTAGTACAAGCAGCCCAAGAAACTCTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR CCA 90 bp CATCTCTTCTCAGGAAGAGGTGGGCACAAGACACATCTGAGCCCCTTAGTATTGATAGTCCCAGCTACTTaGGAGGCTGACATAGGAGAA +
Preference number: 4 (lower is better)
Translates to: HLFSGRGGHKTHLSPLVLIVPAT*EADIGE
Trigger: TTCTCCTATGTCAGCCTCCCAAGTAGCTGGGACTAT...CAATACTAAGGGGCTCAGATGTGTCTTGTGCCCACCTCTTCCTGAGAAGAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR CCA 90 bp GAGTTTCTTGGGCTGCTTGTACTAGTCACAGCTCCACTTCCATCTCTTCTCAGGATAGTCCCAGCTACTTaGGAGGCTGACATAGGAGAA +
Preference number: 4 (lower is better)
Translates to: EFLGLLVLVTAPLPSLLRIVPAT*EADIGE
Trigger: TTCTCCTATGTCAGCCTCCCAAGTAGCTGGGACTAT...CCTGAGAAGAGATGGAAGTGGAGCTGTGACTAGTACAAGCAGCCCAAGAAACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR CCA 90 bp CGTTCAGAGTTTCTTGGGCTGCTTGTACTAGTCACAGCTCCACTTCCATCTCTTCTTCTCAGGAAGAGGTaGGCACAAGACACATCTGAG +
Preference number: 4 (lower is better)
Translates to: RSEFLGLLVLVTAPLPSLLLRKR*AQDTSE
Trigger: CTCAGATGTGTCTTGTGCCCACCTCTTCCTGAGAAG...AAGAGATGGAAGTGGAGCTGTGACTAGTACAAGCAGCCCAAGAAACTCTGAACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR CCA 90 bp AGTCTCTGGAGCCTGAACTCTCACCATGTACCAGAAAAGAATGCCCCTCTTTCGCCGTTCAGAGTTTCTTaGGCTGCTTGTACTAGTCAC +
Preference number: 4 (lower is better)
Translates to: SLWSLNSHHVPEKNAPLSPFRVS*AACTSH
Trigger: GTGACTAGTACAAGCAGCCCAAGAAACTCTGAACGG...CGAAAGAGGGGCATTCTTTTCTGGTACATGGTGAGAGTTCAGGCTCCAGAGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR TCA 90 bp TCAGAGTTTCTTGGGCTGCTTGTACTAGTCACAGCTCCACTTCCATCTCTTCTCGCTGAATCAAATGTCTaGCCTGTTCCAGGAATGCTG +
Preference number: 4 (lower is better)
Translates to: SEFLGLLVLVTAPLPSLLAESNV*PVPGML
Trigger: CAGCATTCCTGGAACAGGTCAGACATTTGATTCAGC...GAGAAGAGATGGAAGTGGAGCTGTGACTAGTACAAGCAGCCCAAGAAACTCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR TCA 90 bp AATGGGGTTGTTTCCTTTGAGTTTGAAGCAGCTTTCGAATGTGACTCCAGGGGGGCTGAATCAAATGTCTaGCCTGTTCCAGGAATGCTG +
Preference number: 4 (lower is better)
Translates to: NGVVSFEFEAAFECDSRGAESNV*PVPGML
Trigger: CAGCATTCCTGGAACAGGTCAGACATTTGATTCAGC...CCCCCTGGAGTCACATTCGAAAGCTGCTTCAAACTCAAAGGAAACAACCCCATT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000535850.5
ENST00000568027.5
CDS-3UTR TCA 90 bp TCCCAATTATTTGCTCAAGTTTGCCTCCATTGGGCCCCGTTCAGAGTTTCTTGGAAAGGGCTCACAATCTaGGCTGGCCTTTTACAATGG +
Preference number: 4 (lower is better)
Translates to: SQLFAQVCLHWAPFRVSWKGLTI*AGLLQW
Trigger: CCATTGTAAAAGGCCAGCTCAGATTGTGAGCCCTTT...CCAAGAAACTCTGAACGGGGCCCAATGGAGGCAAACTTGAGCAAATAATTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR TCA 90 bp CGTTCAGAGTTTCTTGGGCTGCTTGTACTAGTCACAGCTCCACTTCCATCTCTTCATAGGAGAATTGCTTaGACCAGGGAGATGGAGGTT +
Preference number: 4 (lower is better)
Translates to: RSEFLGLLVLVTAPLPSLHRRIA*TREMEV
Trigger: AACCTCCATCTCCCTGGTTCAAGCAATTCTCCTATG...AAGAGATGGAAGTGGAGCTGTGACTAGTACAAGCAGCCCAAGAAACTCTGAACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR TCA 90 bp AGTCTCTGGAGCCTGAACTCTCACCATGTACCAGAAAAGAATGCCCCTCTTTCGAGAGGAGAGCACAAATaGATAGCCCACTTAGAAGCT +
Preference number: 4 (lower is better)
Translates to: SLWSLNSHHVPEKNAPLSRGEHK*IAHLEA
Trigger: AGCTTCTAAGTGGGCTATTCATTTGTGCTCTCCTCT...CGAAAGAGGGGCATTCTTTTCTGGTACATGGTGAGAGTTCAGGCTCCAGAGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR TCA 90 bp TCAGAGTTTCTTGGGCTGCTTGTACTAGTCACAGCTCCACTTCCATCTCTTCTCAGCCCCTTAGTATTGTaGTGGTGGCCAGGAAATGAT +
Preference number: 4 (lower is better)
Translates to: SEFLGLLVLVTAPLPSLLSPLVL*WWPGND
Trigger: ATCATTTCCTGGCCACCATCACAATACTAAGGGGCT...GAGAAGAGATGGAAGTGGAGCTGTGACTAGTACAAGCAGCCCAAGAAACTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR GCA 90 bp AATGCCAAGGAAAACCATTCCGTTTTGAGTCTCTGGAGCCTGAACTCTCACCATTTCAGCATCTCTACTTaGTTCCGGCAACTTAGGGGC +
Preference number: 4 (lower is better)
Translates to: NAKENHSVLSLWSLNSHHFSIST*FRQLRG
Trigger: GCCCCTAAGTTGCCGGAAGCAAGTAGAGATGCTGAA...ATGGTGAGAGTTCAGGCTCCAGAGACTCAAAACGGAATGGTTTTCCTTGGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR GCA 90 bp CGTTCAGAGTTTCTTGGGCTGCTTGTACTAGTCACAGCTCCACTTCCATCTCTTTTATTTGCTCAAGTTTaGCTCCATTGGGCCCCGTTC +
Preference number: 4 (lower is better)
Translates to: RSEFLGLLVLVTAPLPSLLFAQV*LHWAPF
Trigger: GAACGGGGCCCAATGGAGGCAAACTTGAGCAAATAA...AAGAGATGGAAGTGGAGCTGTGACTAGTACAAGCAGCCCAAGAAACTCTGAACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR GCA 90 bp AATTATTTGCTCAAGTTTGCCTCCATTGGGCCCCGTTCAGAGTTTCTTGGGCTGTTATTTGCTCAAGTTTaGCTCCATTGGGCCCCGTTC +
Preference number: 4 (lower is better)
Translates to: NYLLKFASIGPRSEFLGLLFAQV*LHWAPF
Trigger: GAACGGGGCCCAATGGAGGCAAACTTGAGCAAATAA...CAGCCCAAGAAACTCTGAACGGGGCCCAATGGAGGCAAACTTGAGCAAATAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR CCA 90 bp CGTTCAGAGTTTCTTGGGCTGCTTGTACTAGTCACAGCTCCACTTCCATCTCTTATAGTCCCAGCTACTTaGGAGGCTGACATAGGAGAA +
Preference number: 4 (lower is better)
Translates to: RSEFLGLLVLVTAPLPSLIVPAT*EADIGE
Trigger: TTCTCCTATGTCAGCCTCCCAAGTAGCTGGGACTAT...AAGAGATGGAAGTGGAGCTGTGACTAGTACAAGCAGCCCAAGAAACTCTGAACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR CCA 90 bp TTCAGAGTTTCTTGGGCTGCTTGTACTAGTCACAGCTCCACTTCCATCTCTTCTCTTCTCAGGAAGAGGTaGGCACAAGACACATCTGAG +
Preference number: 4 (lower is better)
Translates to: FRVSWAACTSHSSTSISSLLRKR*AQDTSE
Trigger: CTCAGATGTGTCTTGTGCCCACCTCTTCCTGAGAAG...AGAAGAGATGGAAGTGGAGCTGTGACTAGTACAAGCAGCCCAAGAAACTCTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR CCA 90 bp CGTTCAGAGTTTCTTGGGCTGCTTGTACTAGTCACAGCTCCACTTCCATCTCTTCCGTTCAGAGTTTCTTaGGCTGCTTGTACTAGTCAC +
Preference number: 4 (lower is better)
Translates to: RSEFLGLLVLVTAPLPSLPFRVS*AACTSH
Trigger: GTGACTAGTACAAGCAGCCCAAGAAACTCTGAACGG...AAGAGATGGAAGTGGAGCTGTGACTAGTACAAGCAGCCCAAGAAACTCTGAACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR CCA 90 bp TCCCAATTATTTGCTCAAGTTTGCCTCCATTGGGCCCCGTTCAGAGTTTCTTGGCCGTTCAGAGTTTCTTaGGCTGCTTGTACTAGTCAC +
Preference number: 4 (lower is better)
Translates to: SQLFAQVCLHWAPFRVSWPFRVS*AACTSH
Trigger: GTGACTAGTACAAGCAGCCCAAGAAACTCTGAACGG...CCAAGAAACTCTGAACGGGGCCCAATGGAGGCAAACTTGAGCAAATAATTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR CCA 90 bp TTCAGAGTTTCTTGGGCTGCTTGTACTAGTCACAGCTCCACTTCCATCTCTTCTCAAGTTTGCCTCCATTaGGCCCCGTTCAGAGTTTCT +
Preference number: 4 (lower is better)
Translates to: FRVSWAACTSHSSTSISSQVCLH*APFRVS
Trigger: AGAAACTCTGAACGGGGCCCAATGGAGGCAAACTTG...AGAAGAGATGGAAGTGGAGCTGTGACTAGTACAAGCAGCCCAAGAAACTCTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR CCA 90 bp TTTCTTGGGCTGCTTGTACTAGTCACAGCTCCACTTCCATCTCTTCTCAGGAAGTCCGTTTTGAGTCTCTaGAGCCTGAACTCTCACCAT +
Preference number: 4 (lower is better)
Translates to: FLGLLVLVTAPLPSLLRKSVLSL*SLNSHH
Trigger: ATGGTGAGAGTTCAGGCTCCAGAGACTCAAAACGGA...CTTCCTGAGAAGAGATGGAAGTGGAGCTGTGACTAGTACAAGCAGCCCAAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR CCA 90 bp CGTTCAGAGTTTCTTGGGCTGCTTGTACTAGTCACAGCTCCACTTCCATCTCTTTCCGTTTTGAGTCTCTaGAGCCTGAACTCTCACCAT +
Preference number: 4 (lower is better)
Translates to: RSEFLGLLVLVTAPLPSLSVLSL*SLNSHH
Trigger: ATGGTGAGAGTTCAGGCTCCAGAGACTCAAAACGGA...AAGAGATGGAAGTGGAGCTGTGACTAGTACAAGCAGCCCAAGAAACTCTGAACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR CCA 90 bp GAGTTTCTTGGGCTGCTTGTACTAGTCACAGCTCCACTTCCATCTCTTCTCAGGAAAAAGCAGGATTCCTaGGGACAGATCAAGAAGCTG +
Preference number: 4 (lower is better)
Translates to: EFLGLLVLVTAPLPSLLRKKQDS*GQIKKL
Trigger: CAGCTTCTTGATCTGTCCCCAGGAATCCTGCTTTTT...CCTGAGAAGAGATGGAAGTGGAGCTGTGACTAGTACAAGCAGCCCAAGAAACTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396559.5
CDS-3UTR TCA 90 bp TTCAGAGTTTCTTGGGCTGCTTGTACTAGTCACAGCTCCACTTCCATCTCTTCTAAAGGGCTCACAATCTaGGCTGGCCTTTTACAATGG +
Preference number: 4 (lower is better)
Translates to: FRVSWAACTSHSSTSISSKGLTI*AGLLQW
Trigger: CCATTGTAAAAGGCCAGCTCAGATTGTGAGCCCTTT...AGAAGAGATGGAAGTGGAGCTGTGACTAGTACAAGCAGCCCAAGAAACTCTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR TCA 90 bp TGTACCAGAAAAGAATGCCCCTCTTTCGAACTTTCAAACAGTTGGGATTATTTTGGTGCACTCCAGGGATaGTCTGGCCCTCAGTCAAGG +
Preference number: 4 (lower is better)
Translates to: CTRKECPSFELSNSWDYFGALQG*SGPQSR
Trigger: CCTTGACTGAGGGCCAGATCATCCCTGGAGTGCACC...AAAATAATCCCAACTGTTTGAAAGTTCGAAAGAGGGGCATTCTTTTCTGGTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR TCA 90 bp TTCAGAGTTTCTTGGGCTGCTTGTACTAGTCACAGCTCCACTTCCATCTCTTCTCATAGGAGAATTGCTTaGACCAGGGAGATGGAGGTT +
Preference number: 4 (lower is better)
Translates to: FRVSWAACTSHSSTSISSHRRIA*TREMEV
Trigger: AACCTCCATCTCCCTGGTTCAAGCAATTCTCCTATG...AGAAGAGATGGAAGTGGAGCTGTGACTAGTACAAGCAGCCCAAGAAACTCTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR TCA 90 bp AATTATTTGCTCAAGTTTGCCTCCATTGGGCCCCGTTCAGAGTTTCTTGGGCTGAGCCCACTTAGAAGCTaGATAGAAAGAATGGGAAGC +
Preference number: 4 (lower is better)
Translates to: NYLLKFASIGPRSEFLGLSPLRS*IERMGS
Trigger: GCTTCCCATTCTTTCTATTCAGCTTCTAAGTGGGCT...CAGCCCAAGAAACTCTGAACGGGGCCCAATGGAGGCAAACTTGAGCAAATAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR TCA 90 bp TCAGAGTTTCTTGGGCTGCTTGTACTAGTCACAGCTCCACTTCCATCTCTTCTCAGCCCACTTAGAAGCTaGATAGAAAGAATGGGAAGC +
Preference number: 4 (lower is better)
Translates to: SEFLGLLVLVTAPLPSLLSPLRS*IERMGS
Trigger: GCTTCCCATTCTTTCTATTCAGCTTCTAAGTGGGCT...GAGAAGAGATGGAAGTGGAGCTGTGACTAGTACAAGCAGCCCAAGAAACTCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR TCA 90 bp CGTTCAGAGTTTCTTGGGCTGCTTGTACTAGTCACAGCTCCACTTCCATCTCTTAGAGGAGAGCACAAATaGATAGCCCACTTAGAAGCT +
Preference number: 4 (lower is better)
Translates to: RSEFLGLLVLVTAPLPSLRGEHK*IAHLEA
Trigger: AGCTTCTAAGTGGGCTATTCATTTGTGCTCTCCTCT...AAGAGATGGAAGTGGAGCTGTGACTAGTACAAGCAGCCCAAGAAACTCTGAACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR TCA 90 bp CCAATGGGGTTGTTTCCTTTGAGTTTGAAGCAGCTTTCGAATGTGACTCCAGGGAGAGGAGAGCACAAATaGATAGCCCACTTAGAAGCT +
Preference number: 4 (lower is better)
Translates to: PMGLFPLSLKQLSNVTPGRGEHK*IAHLEA
Trigger: AGCTTCTAAGTGGGCTATTCATTTGTGCTCTCCTCT...CCCTGGAGTCACATTCGAAAGCTGCTTCAAACTCAAAGGAAACAACCCCATTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568027.5
CDS-3UTR TCA 90 bp TTTGCCTCCATTGGGCCCCGTTCAGAGTTTCTTGGGCTGCTTGTACTAGTCACAGGCTATTTCCCCAAATaGTTGACAAAGTGCAAAACA +
Preference number: 4 (lower is better)
Translates to: FASIGPRSEFLGLLVLVTGYFPK*LTKCKT
Trigger: TGTTTTGCACTTTGTCAATCATTTGGGGAAATAGCC...TGTGACTAGTACAAGCAGCCCAAGAAACTCTGAACGGGGCCCAATGGAGGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR TCA 90 bp CAAGTTTGCCTCCATTGGGCCCCGTTCAGAGTTTCTTGGGCTGCTTGTACTAGTGGCTATTTCCCCAAATaGTTGACAAAGTGCAAAACA +
Preference number: 4 (lower is better)
Translates to: QVCLHWAPFRVSWAACTSGYFPK*LTKCKT
Trigger: TGTTTTGCACTTTGTCAATCATTTGGGGAAATAGCC...ACTAGTACAAGCAGCCCAAGAAACTCTGAACGGGGCCCAATGGAGGCAAACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR GCA 90 bp CAAGTTTGCCTCCATTGGGCCCCGTTCAGAGTTTCTTGGGCTGCTTGTACTAGTAACATTACTCCCAATTaGTGTTTTCAGCGCTTCAAC +
Preference number: 4 (lower is better)
Translates to: QVCLHWAPFRVSWAACTSNITPN*CFQRFN
Trigger: GTTGAAGCGCTGAAAACAGCAATTGGGAGTAATGTT...ACTAGTACAAGCAGCCCAAGAAACTCTGAACGGGGCCCAATGGAGGCAAACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR GCA 90 bp CAAGTTTGCCTCCATTGGGCCCCGTTCAGAGTTTCTTGGGCTGCTTGTACTAGTTGTACCAGAAAAGAATaGCCCTCTTTCGAACTTTCA +
Preference number: 4 (lower is better)
Translates to: QVCLHWAPFRVSWAACTSCTRKE*PSFELS
Trigger: TGAAAGTTCGAAAGAGGGGCATTCTTTTCTGGTACA...ACTAGTACAAGCAGCCCAAGAAACTCTGAACGGGGCCCAATGGAGGCAAACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR CCA 90 bp TGCTCAAGTTTGCCTCCATTGGGCCCCGTTCAGAGTTTCTTGGGCTGCTTGTACTTCTGTTGTTCTACTTaGCTTTTGGTACGAACAAAC +
Preference number: 4 (lower is better)
Translates to: CSSLPPLGPVQSFLGCLYFCCST*LLVRTN
Trigger: GTTTGTTCGTACCAAAAGCCAAGTAGAACAACAGAA...GTACAAGCAGCCCAAGAAACTCTGAACGGGGCCCAATGGAGGCAAACTTGAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR CCA 90 bp TTTCTTGGGCTGCTTGTACTAGTCACAGCTCCACTTCCATCTCTTCTCAGGAAGAAGGACTCAGGAACCTaGACTGCATTTTGTGCCAAT +
Preference number: 4 (lower is better)
Translates to: FLGLLVLVTAPLPSLLRKKDSGT*TAFCAN
Trigger: ATTGGCACAAAATGCAGTCCAGGTTCCTGAGTCCTT...CTTCCTGAGAAGAGATGGAAGTGGAGCTGTGACTAGTACAAGCAGCCCAAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR CCA 90 bp TCCCAATTATTTGCTCAAGTTTGCCTCCATTGGGCCCCGTTCAGAGTTTCTTGGAAGGACTCAGGAACCTaGACTGCATTTTGTGCCAAT +
Preference number: 4 (lower is better)
Translates to: SQLFAQVCLHWAPFRVSWKDSGT*TAFCAN
Trigger: ATTGGCACAAAATGCAGTCCAGGTTCCTGAGTCCTT...CCAAGAAACTCTGAACGGGGCCCAATGGAGGCAAACTTGAGCAAATAATTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR CCA 90 bp CGTTCAGAGTTTCTTGGGCTGCTTGTACTAGTCACAGCTCCACTTCCATCTCTTAAGGACTCAGGAACCTaGACTGCATTTTGTGCCAAT +
Preference number: 4 (lower is better)
Translates to: RSEFLGLLVLVTAPLPSLKDSGT*TAFCAN
Trigger: ATTGGCACAAAATGCAGTCCAGGTTCCTGAGTCCTT...AAGAGATGGAAGTGGAGCTGTGACTAGTACAAGCAGCCCAAGAAACTCTGAACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR CCA 90 bp AATGGGGTTGTTTCCTTTGAGTTTGAAGCAGCTTTCGAATGTGACTCCAGGGGGAAGGACTCAGGAACCTaGACTGCATTTTGTGCCAAT +
Preference number: 4 (lower is better)
Translates to: NGVVSFEFEAAFECDSRGKDSGT*TAFCAN
Trigger: ATTGGCACAAAATGCAGTCCAGGTTCCTGAGTCCTT...CCCCCTGGAGTCACATTCGAAAGCTGCTTCAAACTCAAAGGAAACAACCCCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000535850.5
ENST00000568027.5
CDS-3UTR CCA 90 bp AATTATTTGCTCAAGTTTGCCTCCATTGGGCCCCGTTCAGAGTTTCTTGGGCTGAAGGACTCAGGAACCTaGACTGCATTTTGTGCCAAT +
Preference number: 4 (lower is better)
Translates to: NYLLKFASIGPRSEFLGLKDSGT*TAFCAN
Trigger: ATTGGCACAAAATGCAGTCCAGGTTCCTGAGTCCTT...CAGCCCAAGAAACTCTGAACGGGGCCCAATGGAGGCAAACTTGAGCAAATAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR CCA 90 bp AATGCCAAGGAAAACCATTCCGTTTTGAGTCTCTGGAGCCTGAACTCTCACCATATAGTCCCAGCTACTTaGGAGGCTGACATAGGAGAA +
Preference number: 4 (lower is better)
Translates to: NAKENHSVLSLWSLNSHHIVPAT*EADIGE
Trigger: TTCTCCTATGTCAGCCTCCCAAGTAGCTGGGACTAT...ATGGTGAGAGTTCAGGCTCCAGAGACTCAAAACGGAATGGTTTTCCTTGGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR TCA 90 bp TTTGCCTCCATTGGGCCCCGTTCAGAGTTTCTTGGGCTGCTTGTACTAGTCACACTTGTTACATTTGTCTaGTGCTCAGAATCGTTTTCA +
Preference number: 4 (lower is better)
Translates to: FASIGPRSEFLGLLVLVTLVTFV*CSESFS
Trigger: TGAAAACGATTCTGAGCATCAGACAAATGTAACAAG...TGTGACTAGTACAAGCAGCCCAAGAAACTCTGAACGGGGCCCAATGGAGGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR TCA 90 bp GAGTTTCTTGGGCTGCTTGTACTAGTCACAGCTCCACTTCCATCTCTTCTCAGGTTGGAAGCTAAAAACTaGGATAAAGTACAGGCCATG +
Preference number: 4 (lower is better)
Translates to: EFLGLLVLVTAPLPSLLRLEAKN*DKVQAM
Trigger: CATGGCCTGTACTTTATCTCAGTTTTTAGCTTCCAA...CCTGAGAAGAGATGGAAGTGGAGCTGTGACTAGTACAAGCAGCCCAAGAAACTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR TCA 90 bp GAGTTTCTTGGGCTGCTTGTACTAGTCACAGCTCCACTTCCATCTCTTCTCAGGGGCTATTTCCCCAAATaGTTGACAAAGTGCAAAACA +
Preference number: 4 (lower is better)
Translates to: EFLGLLVLVTAPLPSLLRGYFPK*LTKCKT
Trigger: TGTTTTGCACTTTGTCAATCATTTGGGGAAATAGCC...CCTGAGAAGAGATGGAAGTGGAGCTGTGACTAGTACAAGCAGCCCAAGAAACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR GCA 90 bp TTTGCCTCCATTGGGCCCCGTTCAGAGTTTCTTGGGCTGCTTGTACTAGTCACAATCATCCCAATTATTTaGTCAAGTTTGCCTCCATTG +
Preference number: 4 (lower is better)
Translates to: FASIGPRSEFLGLLVLVTIIPII*SSLPPL
Trigger: CAATGGAGGCAAACTTGAGCAAATAATTGGGATGAT...TGTGACTAGTACAAGCAGCCCAAGAAACTCTGAACGGGGCCCAATGGAGGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR CCA 90 bp TTCAGAGTTTCTTGGGCTGCTTGTACTAGTCACAGCTCCACTTCCATCTCTTCTAAGGACTCAGGAACCTaGACTGCATTTTGTGCCAAT +
Preference number: 4 (lower is better)
Translates to: FRVSWAACTSHSSTSISSKDSGT*TAFCAN
Trigger: ATTGGCACAAAATGCAGTCCAGGTTCCTGAGTCCTT...AGAAGAGATGGAAGTGGAGCTGTGACTAGTACAAGCAGCCCAAGAAACTCTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR CCA 90 bp CACCATGTACCAGAAAAGAATGCCCCTCTTTCGAACTTTCAAACAGTTGGGATTCTTCTCAGGAAGAGGTaGGCACAAGACACATCTGAG +
Preference number: 4 (lower is better)
Translates to: HHVPEKNAPLSNFQTVGILLRKR*AQDTSE
Trigger: CTCAGATGTGTCTTGTGCCCACCTCTTCCTGAGAAG...AATCCCAACTGTTTGAAAGTTCGAAAGAGGGGCATTCTTTTCTGGTACATGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR TCA 90 bp CCATCTCTTCTCAGGAAGAGGTGGGCACAAGACACATCTGAGCCCCTTAGTATTCTTGTTACATTTGTCTaGTGCTCAGAATCGTTTTCA +
Preference number: 4 (lower is better)
Translates to: PSLLRKRWAQDTSEPLSILVTFV*CSESFS
Trigger: TGAAAACGATTCTGAGCATCAGACAAATGTAACAAG...AATACTAAGGGGCTCAGATGTGTCTTGTGCCCACCTCTTCCTGAGAAGAGATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR TCA 90 bp CATCTCTTCTCAGGAAGAGGTGGGCACAAGACACATCTGAGCCCCTTAGTATTGGTTGTTAGAAGTGACTaGATTCACCAAATTAGGTGT +
Preference number: 4 (lower is better)
Translates to: HLFSGRGGHKTHLSPLVLVVRSD*IHQIRC
Trigger: ACACCTAATTTGGTGAATTCAGTCACTTCTAACAAC...CAATACTAAGGGGCTCAGATGTGTCTTGTGCCCACCTCTTCCTGAGAAGAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR TCA 90 bp CACCATGTACCAGAAAAGAATGCCCCTCTTTCGAACTTTCAAACAGTTGGGATTGCTGAATCAAATGTCTaGCCTGTTCCAGGAATGCTG +
Preference number: 4 (lower is better)
Translates to: HHVPEKNAPLSNFQTVGIAESNV*PVPGML
Trigger: CAGCATTCCTGGAACAGGTCAGACATTTGATTCAGC...AATCCCAACTGTTTGAAAGTTCGAAAGAGGGGCATTCTTTTCTGGTACATGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR TCA 90 bp CGTTCAGAGTTTCTTGGGCTGCTTGTACTAGTCACAGCTCCACTTCCATCTCTTCAGGTTACTAAAAGCTaGTTGTTAACGGAGGAAACA +
Preference number: 4 (lower is better)
Translates to: RSEFLGLLVLVTAPLPSLQVTKS*LLTEET
Trigger: TGTTTCCTCCGTTAACAATCAGCTTTTAGTAACCTG...AAGAGATGGAAGTGGAGCTGTGACTAGTACAAGCAGCCCAAGAAACTCTGAACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR TCA 90 bp TCCCAATTATTTGCTCAAGTTTGCCTCCATTGGGCCCCGTTCAGAGTTTCTTGGCAGGTTACTAAAAGCTaGTTGTTAACGGAGGAAACA +
Preference number: 4 (lower is better)
Translates to: SQLFAQVCLHWAPFRVSWQVTKS*LLTEET
Trigger: TGTTTCCTCCGTTAACAATCAGCTTTTAGTAACCTG...CCAAGAAACTCTGAACGGGGCCCAATGGAGGCAAACTTGAGCAAATAATTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR GCA 90 bp TCAGAGTTTCTTGGGCTGCTTGTACTAGTCACAGCTCCACTTCCATCTCTTCTCAACATTACTCCCAATTaGTGTTTTCAGCGCTTCAAC +
Preference number: 4 (lower is better)
Translates to: SEFLGLLVLVTAPLPSLLNITPN*CFQRFN
Trigger: GTTGAAGCGCTGAAAACAGCAATTGGGAGTAATGTT...GAGAAGAGATGGAAGTGGAGCTGTGACTAGTACAAGCAGCCCAAGAAACTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR GCA 90 bp AATTATTTGCTCAAGTTTGCCTCCATTGGGCCCCGTTCAGAGTTTCTTGGGCTGAACATTACTCCCAATTaGTGTTTTCAGCGCTTCAAC +
Preference number: 4 (lower is better)
Translates to: NYLLKFASIGPRSEFLGLNITPN*CFQRFN
Trigger: GTTGAAGCGCTGAAAACAGCAATTGGGAGTAATGTT...CAGCCCAAGAAACTCTGAACGGGGCCCAATGGAGGCAAACTTGAGCAAATAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR GCA 90 bp CCATCTCTTCTCAGGAAGAGGTGGGCACAAGACACATCTGAGCCCCTTAGTATTATCATCCCAATTATTTaGTCAAGTTTGCCTCCATTG +
Preference number: 4 (lower is better)
Translates to: PSLLRKRWAQDTSEPLSIIIPII*SSLPPL
Trigger: CAATGGAGGCAAACTTGAGCAAATAATTGGGATGAT...AATACTAAGGGGCTCAGATGTGTCTTGTGCCCACCTCTTCCTGAGAAGAGATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR GCA 90 bp CGTTCAGAGTTTCTTGGGCTGCTTGTACTAGTCACAGCTCCACTTCCATCTCTTTGTACCAGAAAAGAATaGCCCTCTTTCGAACTTTCA +
Preference number: 4 (lower is better)
Translates to: RSEFLGLLVLVTAPLPSLCTRKE*PSFELS
Trigger: TGAAAGTTCGAAAGAGGGGCATTCTTTTCTGGTACA...AAGAGATGGAAGTGGAGCTGTGACTAGTACAAGCAGCCCAAGAAACTCTGAACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR CCA 90 bp CCATCTCTTCTCAGGAAGAGGTGGGCACAAGACACATCTGAGCCCCTTAGTATTTTCTGTTGTTCTACTTaGCTTTTGGTACGAACAAAC +
Preference number: 4 (lower is better)
Translates to: PSLLRKRWAQDTSEPLSIFCCST*LLVRTN
Trigger: GTTTGTTCGTACCAAAAGCCAAGTAGAACAACAGAA...AATACTAAGGGGCTCAGATGTGTCTTGTGCCCACCTCTTCCTGAGAAGAGATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR CCA 90 bp TTTGCCTCCATTGGGCCCCGTTCAGAGTTTCTTGGGCTGCTTGTACTAGTCACACACAATTTGAAATACTaGTTCTACTACACTCATCAG +
Preference number: 4 (lower is better)
Translates to: FASIGPRSEFLGLLVLVTHNLKY*FYYTHQ
Trigger: CTGATGAGTGTAGTAGAACCAGTATTTCAAATTGTG...TGTGACTAGTACAAGCAGCCCAAGAAACTCTGAACGGGGCCCAATGGAGGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
3UTR CAA 72 bp GAGCATTTACAAAATGCCAAGGAAAACCATTCCGTTTaGAGTCTCTGGAGCCTGAACTCTCACCATGTACCA +
Preference number: 4 (lower is better)
Translates to: EHLQNAKENHSV*SLWSLNSHHVP
Trigger: TGGTACATGGTGAGAGTTCAGGCTCCAGAGACTCAAAACGGAATGGTTTTCCTTGGCATTTTGTAAATGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR TCA 90 bp TCCCAATTATTTGCTCAAGTTTGCCTCCATTGGGCCCCGTTCAGAGTTTCTTGGCTTGTTACATTTGTCTaGTGCTCAGAATCGTTTTCA +
Preference number: 4 (lower is better)
Translates to: SQLFAQVCLHWAPFRVSWLVTFV*CSESFS
Trigger: TGAAAACGATTCTGAGCATCAGACAAATGTAACAAG...CCAAGAAACTCTGAACGGGGCCCAATGGAGGCAAACTTGAGCAAATAATTGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR TCA 90 bp CCAATGGGGTTGTTTCCTTTGAGTTTGAAGCAGCTTTCGAATGTGACTCCAGGGCTTGTTACATTTGTCTaGTGCTCAGAATCGTTTTCA +
Preference number: 4 (lower is better)
Translates to: PMGLFPLSLKQLSNVTPGLVTFV*CSESFS
Trigger: TGAAAACGATTCTGAGCATCAGACAAATGTAACAAG...CCCTGGAGTCACATTCGAAAGCTGCTTCAAACTCAAAGGAAACAACCCCATTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535850.5
ENST00000568027.5
CDS-3UTR TCA 90 bp AATTATTTGCTCAAGTTTGCCTCCATTGGGCCCCGTTCAGAGTTTCTTGGGCTGGTTGTTAGAAGTGACTaGATTCACCAAATTAGGTGT +
Preference number: 4 (lower is better)
Translates to: NYLLKFASIGPRSEFLGLVVRSD*IHQIRC
Trigger: ACACCTAATTTGGTGAATTCAGTCACTTCTAACAAC...CAGCCCAAGAAACTCTGAACGGGGCCCAATGGAGGCAAACTTGAGCAAATAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR TCA 90 bp GTACCAGAAAAGAATGCCCCTCTTTCGAACTTTCAAACAGTTGGGATTATTTTTAAACCCGTTTCACTTTaGGCTCAGGCTTCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: VPEKNAPLSNFQTVGIIFKPVSL*AQASGE
Trigger: CTCCCCAGAAGCCTGAGCTCAAAGTGAAACGGGTTT...AAAAATAATCCCAACTGTTTGAAAGTTCGAAAGAGGGGCATTCTTTTCTGGTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR TCA 90 bp TTCAGAGTTTCTTGGGCTGCTTGTACTAGTCACAGCTCCACTTCCATCTCTTCTTTGGAAGCTAAAAACTaGGATAAAGTACAGGCCATG +
Preference number: 4 (lower is better)
Translates to: FRVSWAACTSHSSTSISSLEAKN*DKVQAM
Trigger: CATGGCCTGTACTTTATCTCAGTTTTTAGCTTCCAA...AGAAGAGATGGAAGTGGAGCTGTGACTAGTACAAGCAGCCCAAGAAACTCTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR TCA 90 bp TTCAGAGTTTCTTGGGCTGCTTGTACTAGTCACAGCTCCACTTCCATCTCTTCTGGCTATTTCCCCAAATaGTTGACAAAGTGCAAAACA +
Preference number: 4 (lower is better)
Translates to: FRVSWAACTSHSSTSISSGYFPK*LTKCKT
Trigger: TGTTTTGCACTTTGTCAATCATTTGGGGAAATAGCC...AGAAGAGATGGAAGTGGAGCTGTGACTAGTACAAGCAGCCCAAGAAACTCTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR TCA 90 bp AATTATTTGCTCAAGTTTGCCTCCATTGGGCCCCGTTCAGAGTTTCTTGGGCTGTTATTGCTACAGATGTaGGAGCATTTACAAAATGCC +
Preference number: 4 (lower is better)
Translates to: NYLLKFASIGPRSEFLGLLLLQM*EHLQNA
Trigger: GGCATTTTGTAAATGCTCTCACATCTGTAGCAATAA...CAGCCCAAGAAACTCTGAACGGGGCCCAATGGAGGCAAACTTGAGCAAATAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR GCA 90 bp AATGCCAAGGAAAACCATTCCGTTTTGAGTCTCTGGAGCCTGAACTCTCACCATAACATTACTCCCAATTaGTGTTTTCAGCGCTTCAAC +
Preference number: 4 (lower is better)
Translates to: NAKENHSVLSLWSLNSHHNITPN*CFQRFN
Trigger: GTTGAAGCGCTGAAAACAGCAATTGGGAGTAATGTT...ATGGTGAGAGTTCAGGCTCCAGAGACTCAAAACGGAATGGTTTTCCTTGGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR GCA 90 bp TGTGCCAATGGGGTTGTTTCCTTTGAGTTTGAAGCAGCTTTCGAATGTGACTCCAACATTACTCCCAATTaGTGTTTTCAGCGCTTCAAC +
Preference number: 4 (lower is better)
Translates to: CANGVVSFEFEAAFECDSNITPN*CFQRFN
Trigger: GTTGAAGCGCTGAAAACAGCAATTGGGAGTAATGTT...GGAGTCACATTCGAAAGCTGCTTCAAACTCAAAGGAAACAACCCCATTGGCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535850.5
ENST00000568027.5
CDS-3UTR GCA 90 bp TTCAGAGTTTCTTGGGCTGCTTGTACTAGTCACAGCTCCACTTCCATCTCTTCTTCAAAGGTGGACAAATaGATTCTCAACTCAAACAGG +
Preference number: 4 (lower is better)
Translates to: FRVSWAACTSHSSTSISSSKVDK*ILNSNR
Trigger: CCTGTTTGAGTTGAGAATGCATTTGTCCACCTTTGA...AGAAGAGATGGAAGTGGAGCTGTGACTAGTACAAGCAGCCCAAGAAACTCTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR GCA 90 bp AATGGGGTTGTTTCCTTTGAGTTTGAAGCAGCTTTCGAATGTGACTCCAGGGGGATCATCCCAATTATTTaGTCAAGTTTGCCTCCATTG +
Preference number: 4 (lower is better)
Translates to: NGVVSFEFEAAFECDSRGIIPII*SSLPPL
Trigger: CAATGGAGGCAAACTTGAGCAAATAATTGGGATGAT...CCCCCTGGAGTCACATTCGAAAGCTGCTTCAAACTCAAAGGAAACAACCCCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568027.5
CDS-3UTR GCA 90 bp AATGCCAAGGAAAACCATTCCGTTTTGAGTCTCTGGAGCCTGAACTCTCACCATTGTACCAGAAAAGAATaGCCCTCTTTCGAACTTTCA +
Preference number: 4 (lower is better)
Translates to: NAKENHSVLSLWSLNSHHCTRKE*PSFELS
Trigger: TGAAAGTTCGAAAGAGGGGCATTCTTTTCTGGTACA...ATGGTGAGAGTTCAGGCTCCAGAGACTCAAAACGGAATGGTTTTCCTTGGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR CCA 90 bp TCCCAATTATTTGCTCAAGTTTGCCTCCATTGGGCCCCGTTCAGAGTTTCTTGGTTCTGTTGTTCTACTTaGCTTTTGGTACGAACAAAC +
Preference number: 4 (lower is better)
Translates to: SQLFAQVCLHWAPFRVSWFCCST*LLVRTN
Trigger: GTTTGTTCGTACCAAAAGCCAAGTAGAACAACAGAA...CCAAGAAACTCTGAACGGGGCCCAATGGAGGCAAACTTGAGCAAATAATTGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR CCA 90 bp CCAATGGGGTTGTTTCCTTTGAGTTTGAAGCAGCTTTCGAATGTGACTCCAGGGTTCTGTTGTTCTACTTaGCTTTTGGTACGAACAAAC +
Preference number: 4 (lower is better)
Translates to: PMGLFPLSLKQLSNVTPGFCCST*LLVRTN
Trigger: GTTTGTTCGTACCAAAAGCCAAGTAGAACAACAGAA...CCCTGGAGTCACATTCGAAAGCTGCTTCAAACTCAAAGGAAACAACCCCATTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535850.5
ENST00000568027.5
CDS-3UTR CCA 90 bp GAGTTTCTTGGGCTGCTTGTACTAGTCACAGCTCCACTTCCATCTCTTCTCAGGCACAATTTGAAATACTaGTTCTACTACACTCATCAG +
Preference number: 4 (lower is better)
Translates to: EFLGLLVLVTAPLPSLLRHNLKY*FYYTHQ
Trigger: CTGATGAGTGTAGTAGAACCAGTATTTCAAATTGTG...CCTGAGAAGAGATGGAAGTGGAGCTGTGACTAGTACAAGCAGCCCAAGAAACTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR CCA 90 bp CCATGTACCAGAAAAGAATGCCCCTCTTTCGAACTTTCAAACAGTTGGGATTATTCCGTTTTGAGTCTCTaGAGCCTGAACTCTCACCAT +
Preference number: 4 (lower is better)
Translates to: PCTRKECPSFELSNSWDYSVLSL*SLNSHH
Trigger: ATGGTGAGAGTTCAGGCTCCAGAGACTCAAAACGGA...ATAATCCCAACTGTTTGAAAGTTCGAAAGAGGGGCATTCTTTTCTGGTACATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR TCA 90 bp TTCAGAGTTTCTTGGGCTGCTTGTACTAGTCACAGCTCCACTTCCATCTCTTCTGTTGTTAGAAGTGACTaGATTCACCAAATTAGGTGT +
Preference number: 4 (lower is better)
Translates to: FRVSWAACTSHSSTSISSVVRSD*IHQIRC
Trigger: ACACCTAATTTGGTGAATTCAGTCACTTCTAACAAC...AGAAGAGATGGAAGTGGAGCTGTGACTAGTACAAGCAGCCCAAGAAACTCTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR TCA 90 bp TGTGCCAATGGGGTTGTTTCCTTTGAGTTTGAAGCAGCTTTCGAATGTGACTCCGTTGTTAGAAGTGACTaGATTCACCAAATTAGGTGT +
Preference number: 4 (lower is better)
Translates to: CANGVVSFEFEAAFECDSVVRSD*IHQIRC
Trigger: ACACCTAATTTGGTGAATTCAGTCACTTCTAACAAC...GGAGTCACATTCGAAAGCTGCTTCAAACTCAAAGGAAACAACCCCATTGGCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535850.5
ENST00000568027.5
CDS-3UTR TCA 90 bp TTCAGAGTTTCTTGGGCTGCTTGTACTAGTCACAGCTCCACTTCCATCTCTTCTTTATTGCTACAGATGTaGGAGCATTTACAAAATGCC +
Preference number: 4 (lower is better)
Translates to: FRVSWAACTSHSSTSISSLLLQM*EHLQNA
Trigger: GGCATTTTGTAAATGCTCTCACATCTGTAGCAATAA...AGAAGAGATGGAAGTGGAGCTGTGACTAGTACAAGCAGCCCAAGAAACTCTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR CCA 90 bp TCCCAATTATTTGCTCAAGTTTGCCTCCATTGGGCCCCGTTCAGAGTTTCTTGGCACAATTTGAAATACTaGTTCTACTACACTCATCAG +
Preference number: 4 (lower is better)
Translates to: SQLFAQVCLHWAPFRVSWHNLKY*FYYTHQ
Trigger: CTGATGAGTGTAGTAGAACCAGTATTTCAAATTGTG...CCAAGAAACTCTGAACGGGGCCCAATGGAGGCAAACTTGAGCAAATAATTGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR CCA 90 bp TTTCTTGGGCTGCTTGTACTAGTCACAGCTCCACTTCCATCTCTTCTCAGGAAGCACAATTTGAAATACTaGTTCTACTACACTCATCAG +
Preference number: 4 (lower is better)
Translates to: FLGLLVLVTAPLPSLLRKHNLKY*FYYTHQ
Trigger: CTGATGAGTGTAGTAGAACCAGTATTTCAAATTGTG...CTTCCTGAGAAGAGATGGAAGTGGAGCTGTGACTAGTACAAGCAGCCCAAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR CCA 90 bp CCAATGGGGTTGTTTCCTTTGAGTTTGAAGCAGCTTTCGAATGTGACTCCAGGGCACAATTTGAAATACTaGTTCTACTACACTCATCAG +
Preference number: 4 (lower is better)
Translates to: PMGLFPLSLKQLSNVTPGHNLKY*FYYTHQ
Trigger: CTGATGAGTGTAGTAGAACCAGTATTTCAAATTGTG...CCCTGGAGTCACATTCGAAAGCTGCTTCAAACTCAAAGGAAACAACCCCATTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535850.5
ENST00000568027.5
CDS-3UTR CCA 90 bp GTACCAGAAAAGAATGCCCCTCTTTCGAACTTTCAAACAGTTGGGATTATTTTTCAAGTTTGCCTCCATTaGGCCCCGTTCAGAGTTTCT +
Preference number: 4 (lower is better)
Translates to: VPEKNAPLSNFQTVGIIFQVCLH*APFRVS
Trigger: AGAAACTCTGAACGGGGCCCAATGGAGGCAAACTTG...AAAAATAATCCCAACTGTTTGAAAGTTCGAAAGAGGGGCATTCTTTTCTGGTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR TCA 90 bp CACCATGTACCAGAAAAGAATGCCCCTCTTTCGAACTTTCAAACAGTTGGGATTTTGGAAGCTAAAAACTaGGATAAAGTACAGGCCATG +
Preference number: 4 (lower is better)
Translates to: HHVPEKNAPLSNFQTVGILEAKN*DKVQAM
Trigger: CATGGCCTGTACTTTATCTCAGTTTTTAGCTTCCAA...AATCCCAACTGTTTGAAAGTTCGAAAGAGGGGCATTCTTTTCTGGTACATGGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR TCA 90 bp TGTACCAGAAAAGAATGCCCCTCTTTCGAACTTTCAAACAGTTGGGATTATTTTAAAGGGCTCACAATCTaGGCTGGCCTTTTACAATGG +
Preference number: 4 (lower is better)
Translates to: CTRKECPSFELSNSWDYFKGLTI*AGLLQW
Trigger: CCATTGTAAAAGGCCAGCTCAGATTGTGAGCCCTTT...AAAATAATCCCAACTGTTTGAAAGTTCGAAAGAGGGGCATTCTTTTCTGGTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR GCA 90 bp CACCATGTACCAGAAAAGAATGCCCCTCTTTCGAACTTTCAAACAGTTGGGATTTGTACCAGAAAAGAATaGCCCTCTTTCGAACTTTCA +
Preference number: 4 (lower is better)
Translates to: HHVPEKNAPLSNFQTVGICTRKE*PSFELS
Trigger: TGAAAGTTCGAAAGAGGGGCATTCTTTTCTGGTACA...AATCCCAACTGTTTGAAAGTTCGAAAGAGGGGCATTCTTTTCTGGTACATGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR CCA 90 bp GTACCAGAAAAGAATGCCCCTCTTTCGAACTTTCAAACAGTTGGGATTATTTTTCCGTTCAGAGTTTCTTaGGCTGCTTGTACTAGTCAC +
Preference number: 4 (lower is better)
Translates to: VPEKNAPLSNFQTVGIIFPFRVS*AACTSH
Trigger: GTGACTAGTACAAGCAGCCCAAGAAACTCTGAACGG...AAAAATAATCCCAACTGTTTGAAAGTTCGAAAGAGGGGCATTCTTTTCTGGTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR CCA 90 bp TGTACCAGAAAAGAATGCCCCTCTTTCGAACTTTCAAACAGTTGGGATTATTTTTCCGTTTTGAGTCTCTaGAGCCTGAACTCTCACCAT +
Preference number: 4 (lower is better)
Translates to: CTRKECPSFELSNSWDYFSVLSL*SLNSHH
Trigger: ATGGTGAGAGTTCAGGCTCCAGAGACTCAAAACGGA...AAAATAATCCCAACTGTTTGAAAGTTCGAAAGAGGGGCATTCTTTTCTGGTACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR TCA 90 bp CACCATGTACCAGAAAAGAATGCCCCTCTTTCGAACTTTCAAACAGTTGGGATTCTTGTTACATTTGTCTaGTGCTCAGAATCGTTTTCA +
Preference number: 4 (lower is better)
Translates to: HHVPEKNAPLSNFQTVGILVTFV*CSESFS
Trigger: TGAAAACGATTCTGAGCATCAGACAAATGTAACAAG...AATCCCAACTGTTTGAAAGTTCGAAAGAGGGGCATTCTTTTCTGGTACATGGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR TCA 90 bp CCATGTACCAGAAAAGAATGCCCCTCTTTCGAACTTTCAAACAGTTGGGATTATTTGGAAGCTAAAAACTaGGATAAAGTACAGGCCATG +
Preference number: 4 (lower is better)
Translates to: PCTRKECPSFELSNSWDYLEAKN*DKVQAM
Trigger: CATGGCCTGTACTTTATCTCAGTTTTTAGCTTCCAA...ATAATCCCAACTGTTTGAAAGTTCGAAAGAGGGGCATTCTTTTCTGGTACATGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR TCA 90 bp GTACCAGAAAAGAATGCCCCTCTTTCGAACTTTCAAACAGTTGGGATTATTTTTAGCCCACTTAGAAGCTaGATAGAAAGAATGGGAAGC +
Preference number: 4 (lower is better)
Translates to: VPEKNAPLSNFQTVGIIFSPLRS*IERMGS
Trigger: GCTTCCCATTCTTTCTATTCAGCTTCTAAGTGGGCT...AAAAATAATCCCAACTGTTTGAAAGTTCGAAAGAGGGGCATTCTTTTCTGGTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR TCA 90 bp TGTACCAGAAAAGAATGCCCCTCTTTCGAACTTTCAAACAGTTGGGATTATTTTAGAGGAGAGCACAAATaGATAGCCCACTTAGAAGCT +
Preference number: 4 (lower is better)
Translates to: CTRKECPSFELSNSWDYFRGEHK*IAHLEA
Trigger: AGCTTCTAAGTGGGCTATTCATTTGTGCTCTCCTCT...AAAATAATCCCAACTGTTTGAAAGTTCGAAAGAGGGGCATTCTTTTCTGGTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR TCA 90 bp CACCATGTACCAGAAAAGAATGCCCCTCTTTCGAACTTTCAAACAGTTGGGATTTTATTGCTACAGATGTaGGAGCATTTACAAAATGCC +
Preference number: 4 (lower is better)
Translates to: HHVPEKNAPLSNFQTVGILLLQM*EHLQNA
Trigger: GGCATTTTGTAAATGCTCTCACATCTGTAGCAATAA...AATCCCAACTGTTTGAAAGTTCGAAAGAGGGGCATTCTTTTCTGGTACATGGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR TCA 90 bp CCATGTACCAGAAAAGAATGCCCCTCTTTCGAACTTTCAAACAGTTGGGATTATTTATTGCTACAGATGTaGGAGCATTTACAAAATGCC +
Preference number: 4 (lower is better)
Translates to: PCTRKECPSFELSNSWDYLLLQM*EHLQNA
Trigger: GGCATTTTGTAAATGCTCTCACATCTGTAGCAATAA...ATAATCCCAACTGTTTGAAAGTTCGAAAGAGGGGCATTCTTTTCTGGTACATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR GCA 90 bp GTACCAGAAAAGAATGCCCCTCTTTCGAACTTTCAAACAGTTGGGATTATTTTTAACATTACTCCCAATTaGTGTTTTCAGCGCTTCAAC +
Preference number: 4 (lower is better)
Translates to: VPEKNAPLSNFQTVGIIFNITPN*CFQRFN
Trigger: GTTGAAGCGCTGAAAACAGCAATTGGGAGTAATGTT...AAAAATAATCCCAACTGTTTGAAAGTTCGAAAGAGGGGCATTCTTTTCTGGTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR GCA 90 bp GTACCAGAAAAGAATGCCCCTCTTTCGAACTTTCAAACAGTTGGGATTATTTTTTGTACCAGAAAAGAATaGCCCTCTTTCGAACTTTCA +
Preference number: 4 (lower is better)
Translates to: VPEKNAPLSNFQTVGIIFCTRKE*PSFELS
Trigger: TGAAAGTTCGAAAGAGGGGCATTCTTTTCTGGTACA...AAAAATAATCCCAACTGTTTGAAAGTTCGAAAGAGGGGCATTCTTTTCTGGTAC
38% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR CCA 90 bp GTACCAGAAAAGAATGCCCCTCTTTCGAACTTTCAAACAGTTGGGATTATTTTTTTCTGTTGTTCTACTTaGCTTTTGGTACGAACAAAC +
Preference number: 4 (lower is better)
Translates to: VPEKNAPLSNFQTVGIIFFCCST*LLVRTN
Trigger: GTTTGTTCGTACCAAAAGCCAAGTAGAACAACAGAA...AAAAATAATCCCAACTGTTTGAAAGTTCGAAAGAGGGGCATTCTTTTCTGGTAC
37% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR CCA 90 bp TGTACCAGAAAAGAATGCCCCTCTTTCGAACTTTCAAACAGTTGGGATTATTTTCACAATTTGAAATACTaGTTCTACTACACTCATCAG +
Preference number: 4 (lower is better)
Translates to: CTRKECPSFELSNSWDYFHNLKY*FYYTHQ
Trigger: CTGATGAGTGTAGTAGAACCAGTATTTCAAATTGTG...AAAATAATCCCAACTGTTTGAAAGTTCGAAAGAGGGGCATTCTTTTCTGGTACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS TCA 90 bp GCACCACTTCCCTCCGCAGTCCCTAACCCCAGTGCCGCCCGGACCTaGGGCCGCACACCACTCCCGCTTCACCAGTATCCCTCTGCGAAA +
Preference number: 5 (lower is better)
Translates to: APLPSAVPNPSAART*GRTPLPLHQYPSAK
Trigger: TTTCGCAGAGGGATACTGGTGAAGCGGGAGTGGTGTGCGGCCTCAGGTCCGGGCGGCACTGGGGTTAGGGACTGCGGAGGGAAGTGGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562396.1
CDS CCA 90 bp GGATCCTTCCTCACCTCTTCTAGAAAGGTGGCTCCAGGTGTTCCTTaGCATTCCTTGATCTGCAGCTGTATCACTCCAAGGCCAAGGCAC +
Preference number: 5 (lower is better)
Translates to: GSFLTSSRKVAPGVP*HSLICSCITPRPRH
Trigger: GTGCCTTGGCCTTGGAGTGATACAGCTGCAGATCAAGGAATGCCAAGGAACACCTGGAGCCACCTTTCTAGAAGAGGTGAGGAAGGATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564797.5
CDS-3UTR CAA 90 bp TTTGCCTCCATTGGGCCCCGTTCAGAGTTTCTTGGGCTGCTTGTACTAGTCACATCAAGTTTGCCTCCATaGGGCCCCGTTCAGAGTTTC +
Preference number: 5 (lower is better)
Translates to: FASIGPRSEFLGLLVLVTSSLPP*GPVQSF
Trigger: GAAACTCTGAACGGGGCCCAATGGAGGCAAACTTGA...TGTGACTAGTACAAGCAGCCCAAGAAACTCTGAACGGGGCCCAATGGAGGCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS TCA 90 bp AACCAAGAAGAAATCCCTGATTTACCTGCCAGCCTTGGCTGCTTGTaGTTTCATGAGGCCCGATGCCTTAGGTGGCTGTGCACTTGGATG +
Preference number: 5 (lower is better)
Translates to: NQEEIPDLPASLGCL*FHEARCLRWLCTWM
Trigger: CATCCAAGTGCACAGCCACCTAAGGCATCGGGCCTCATGAAATCACAAGCAGCCAAGGCTGGCAGGTAAATCAGGGATTTCTTCTTGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564797.5
CDS-3UTR CAA 90 bp AGTCTCTGGAGCCTGAACTCTCACCATGTACCAGAAAAGAATGCCCCTCTTTCGTCAAGTTTGCCTCCATaGGGCCCCGTTCAGAGTTTC +
Preference number: 5 (lower is better)
Translates to: SLWSLNSHHVPEKNAPLSSSLPP*GPVQSF
Trigger: GAAACTCTGAACGGGGCCCAATGGAGGCAAACTTGA...CGAAAGAGGGGCATTCTTTTCTGGTACATGGTGAGAGTTCAGGCTCCAGAGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR CAA 90 bp CCATCTCTTCTCAGGAAGAGGTGGGCACAAGACACATCTGAGCCCCTTAGTATTTCAAGTTTGCCTCCATaGGGCCCCGTTCAGAGTTTC +
Preference number: 5 (lower is better)
Translates to: PSLLRKRWAQDTSEPLSISSLPP*GPVQSF
Trigger: GAAACTCTGAACGGGGCCCAATGGAGGCAAACTTGA...AATACTAAGGGGCTCAGATGTGTCTTGTGCCCACCTCTTCCTGAGAAGAGATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR CAA 90 bp TGCTCAAGTTTGCCTCCATTGGGCCCCGTTCAGAGTTTCTTGGGCTGCTTGTACGAAAACCATTCCGTTTaGAGTCTCTGGAGCCTGAAC +
Preference number: 5 (lower is better)
Translates to: CSSLPPLGPVQSFLGCLYENHSV*SLWSLN
Trigger: GTTCAGGCTCCAGAGACTCAAAACGGAATGGTTTTC...GTACAAGCAGCCCAAGAAACTCTGAACGGGGCCCAATGGAGGCAAACTTGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS CCA 90 bp GGACAGATCAAGAAGCTGTCACAGACGGCGGAAGAAAACCAGCAGTaGATCCAAACCAAGAAGAAATCCCTGATTTACCTGCCAGCCTTG +
Preference number: 5 (lower is better)
Translates to: GQIKKLSQTAEENQQ*IQTKKKSLIYLPAL
Trigger: CAAGGCTGGCAGGTAAATCAGGGATTTCTTCTTGGTTTGGATCCACTGCTGGTTTTCTTCCGCCGTCTGTGACAGCTTCTTGATCTGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564797.5
CDS-3UTR CAA 90 bp TGCTCAAGTTTGCCTCCATTGGGCCCCGTTCAGAGTTTCTTGGGCTGCTTGTACATGGGGTTGTTTCCTTaGAGTTTGAAGCAGCTTTCG +
Preference number: 5 (lower is better)
Translates to: CSSLPPLGPVQSFLGCLYMGLFP*SLKQLS
Trigger: CGAAAGCTGCTTCAAACTCAAAGGAAACAACCCCAT...GTACAAGCAGCCCAAGAAACTCTGAACGGGGCCCAATGGAGGCAAACTTGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR CAA 90 bp TTTGCCTCCATTGGGCCCCGTTCAGAGTTTCTTGGGCTGCTTGTACTAGTCACAATTATTTGCTCAAGTTaGCCTCCATTGGGCCCCGTT +
Preference number: 5 (lower is better)
Translates to: FASIGPRSEFLGLLVLVTIICSS*PPLGPV
Trigger: AACGGGGCCCAATGGAGGCAAACTTGAGCAAATAAT...TGTGACTAGTACAAGCAGCCCAAGAAACTCTGAACGGGGCCCAATGGAGGCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS CCA 90 bp GGACAGATCAAGAAGCTGTCACAGACGGCGGAAGAAAACCAGCAGTaGATCCAAACCAAGAAGAAATCCCTGATTTACCTAGAGCGACGA +
Preference number: 5 (lower is better)
Translates to: GQIKKLSQTAEENQQ*IQTKKKSLIYLERR
Trigger: TCGTCGCTCTAGGTAAATCAGGGATTTCTTCTTGGTTTGGATCCACTGCTGGTTTTCTTCCGCCGTCTGTGACAGCTTCTTGATCTGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562102.5
CDS-3UTR CAA 90 bp TTTGCCTCCATTGGGCCCCGTTCAGAGTTTCTTGGGCTGCTTGTACTAGTCACAATGGGGTTGTTTCCTTaGAGTTTGAAGCAGCTTTCG +
Preference number: 5 (lower is better)
Translates to: FASIGPRSEFLGLLVLVTMGLFP*SLKQLS
Trigger: CGAAAGCTGCTTCAAACTCAAAGGAAACAACCCCAT...TGTGACTAGTACAAGCAGCCCAAGAAACTCTGAACGGGGCCCAATGGAGGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR CAA 90 bp GAGTTTCTTGGGCTGCTTGTACTAGTCACAGCTCCACTTCCATCTCTTCTCAGGAACCTGGACTGCATTTaGTGCCAATGGGGTTGTTTC +
Preference number: 5 (lower is better)
Translates to: EFLGLLVLVTAPLPSLLRNLDCI*CQWGCF
Trigger: GAAACAACCCCATTGGCACAAAATGCAGTCCAGGTT...CCTGAGAAGAGATGGAAGTGGAGCTGTGACTAGTACAAGCAGCCCAAGAAACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR CAA 90 bp CATCTCTTCTCAGGAAGAGGTGGGCACAAGACACATCTGAGCCCCTTAGTATTGAACCTGGACTGCATTTaGTGCCAATGGGGTTGTTTC +
Preference number: 5 (lower is better)
Translates to: HLFSGRGGHKTHLSPLVLNLDCI*CQWGCF
Trigger: GAAACAACCCCATTGGCACAAAATGCAGTCCAGGTT...CAATACTAAGGGGCTCAGATGTGTCTTGTGCCCACCTCTTCCTGAGAAGAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR CAA 90 bp CAAGTTTGCCTCCATTGGGCCCCGTTCAGAGTTTCTTGGGCTGCTTGTACTAGTCAGTCACTAAAGGTATaGTTCACAATGCACCTCAGC +
Preference number: 5 (lower is better)
Translates to: QVCLHWAPFRVSWAACTSQSLKV*FTMHLS
Trigger: GCTGAGGTGCATTGTGAACAATACCTTTAGTGACTG...ACTAGTACAAGCAGCCCAAGAAACTCTGAACGGGGCCCAATGGAGGCAAACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR CAA 90 bp AATGCCAAGGAAAACCATTCCGTTTTGAGTCTCTGGAGCCTGAACTCTCACCATTCAAGTTTGCCTCCATaGGGCCCCGTTCAGAGTTTC +
Preference number: 5 (lower is better)
Translates to: NAKENHSVLSLWSLNSHHSSLPP*GPVQSF
Trigger: GAAACTCTGAACGGGGCCCAATGGAGGCAAACTTGA...ATGGTGAGAGTTCAGGCTCCAGAGACTCAAAACGGAATGGTTTTCCTTGGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR CAA 90 bp GAGTTTCTTGGGCTGCTTGTACTAGTCACAGCTCCACTTCCATCTCTTCTCAGGGAAAACCATTCCGTTTaGAGTCTCTGGAGCCTGAAC +
Preference number: 5 (lower is better)
Translates to: EFLGLLVLVTAPLPSLLRENHSV*SLWSLN
Trigger: GTTCAGGCTCCAGAGACTCAAAACGGAATGGTTTTC...CCTGAGAAGAGATGGAAGTGGAGCTGTGACTAGTACAAGCAGCCCAAGAAACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR CAA 90 bp CCATCTCTTCTCAGGAAGAGGTGGGCACAAGACACATCTGAGCCCCTTAGTATTGAAAACCATTCCGTTTaGAGTCTCTGGAGCCTGAAC +
Preference number: 5 (lower is better)
Translates to: PSLLRKRWAQDTSEPLSIENHSV*SLWSLN
Trigger: GTTCAGGCTCCAGAGACTCAAAACGGAATGGTTTTC...AATACTAAGGGGCTCAGATGTGTCTTGTGCCCACCTCTTCCTGAGAAGAGATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR CAA 90 bp CAAGTTTGCCTCCATTGGGCCCCGTTCAGAGTTTCTTGGGCTGCTTGTACTAGTATGCAAAAGGTTCACTaGAGCCCAGGAATTAGACAC +
Preference number: 5 (lower is better)
Translates to: QVCLHWAPFRVSWAACTSMQKVH*SPGIRH
Trigger: GTGTCTAATTCCTGGGCTCAAGTGAACCTTTTGCAT...ACTAGTACAAGCAGCCCAAGAAACTCTGAACGGGGCCCAATGGAGGCAAACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR CAA 90 bp TTTGCCTCCATTGGGCCCCGTTCAGAGTTTCTTGGGCTGCTTGTACTAGTCACATCAGAAGGGCTACATTaGGTTATTTCAGTCGTCCTA +
Preference number: 5 (lower is better)
Translates to: FASIGPRSEFLGLLVLVTSEGLH*VISVVL
Trigger: TAGGACGACTGAAATAACCAAATGTAGCCCTTCTGA...TGTGACTAGTACAAGCAGCCCAAGAAACTCTGAACGGGGCCCAATGGAGGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR CAA 90 bp TTTGCCTCCATTGGGCCCCGTTCAGAGTTTCTTGGGCTGCTTGTACTAGTCACAGGGATCTTGTTACATTaGTCTGATGCTCAGAATCGT +
Preference number: 5 (lower is better)
Translates to: FASIGPRSEFLGLLVLVTGILLH*SDAQNR
Trigger: ACGATTCTGAGCATCAGACAAATGTAACAAGATCCC...TGTGACTAGTACAAGCAGCCCAAGAAACTCTGAACGGGGCCCAATGGAGGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR CAA 90 bp TTTGCCTCCATTGGGCCCCGTTCAGAGTTTCTTGGGCTGCTTGTACTAGTCACATTTGTGCCAATGGGGTaGTTTCCTTTGAGTTTGAAG +
Preference number: 5 (lower is better)
Translates to: FASIGPRSEFLGLLVLVTFVPMG*FPLSLK
Trigger: CTTCAAACTCAAAGGAAACAACCCCATTGGCACAAA...TGTGACTAGTACAAGCAGCCCAAGAAACTCTGAACGGGGCCCAATGGAGGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR CAA 90 bp AATTATTTGCTCAAGTTTGCCTCCATTGGGCCCCGTTCAGAGTTTCTTGGGCTGAACCTGGACTGCATTTaGTGCCAATGGGGTTGTTTC +
Preference number: 5 (lower is better)
Translates to: NYLLKFASIGPRSEFLGLNLDCI*CQWGCF
Trigger: GAAACAACCCCATTGGCACAAAATGCAGTCCAGGTT...CAGCCCAAGAAACTCTGAACGGGGCCCAATGGAGGCAAACTTGAGCAAATAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR CAA 90 bp CGTTCAGAGTTTCTTGGGCTGCTTGTACTAGTCACAGCTCCACTTCCATCTCTTAACCTGGACTGCATTTaGTGCCAATGGGGTTGTTTC +
Preference number: 5 (lower is better)
Translates to: RSEFLGLLVLVTAPLPSLNLDCI*CQWGCF
Trigger: GAAACAACCCCATTGGCACAAAATGCAGTCCAGGTT...AAGAGATGGAAGTGGAGCTGTGACTAGTACAAGCAGCCCAAGAAACTCTGAACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR CAA 90 bp CCAATGGGGTTGTTTCCTTTGAGTTTGAAGCAGCTTTCGAATGTGACTCCAGGGAACCTGGACTGCATTTaGTGCCAATGGGGTTGTTTC +
Preference number: 5 (lower is better)
Translates to: PMGLFPLSLKQLSNVTPGNLDCI*CQWGCF
Trigger: GAAACAACCCCATTGGCACAAAATGCAGTCCAGGTT...CCCTGGAGTCACATTCGAAAGCTGCTTCAAACTCAAAGGAAACAACCCCATTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535850.5
ENST00000568027.5
CDS-3UTR CAA 90 bp CATCTCTTCTCAGGAAGAGGTGGGCACAAGACACATCTGAGCCCCTTAGTATTGCAGTCACTAAAGGTATaGTTCACAATGCACCTCAGC +
Preference number: 5 (lower is better)
Translates to: HLFSGRGGHKTHLSPLVLQSLKV*FTMHLS
Trigger: GCTGAGGTGCATTGTGAACAATACCTTTAGTGACTG...CAATACTAAGGGGCTCAGATGTGTCTTGTGCCCACCTCTTCCTGAGAAGAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR CAA 90 bp TTTCTTGGGCTGCTTGTACTAGTCACAGCTCCACTTCCATCTCTTCTCAGGAAGGAAAACCATTCCGTTTaGAGTCTCTGGAGCCTGAAC +
Preference number: 5 (lower is better)
Translates to: FLGLLVLVTAPLPSLLRKENHSV*SLWSLN
Trigger: GTTCAGGCTCCAGAGACTCAAAACGGAATGGTTTTC...CTTCCTGAGAAGAGATGGAAGTGGAGCTGTGACTAGTACAAGCAGCCCAAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR CAA 90 bp AGTCTCTGGAGCCTGAACTCTCACCATGTACCAGAAAAGAATGCCCCTCTTTCGATGCAAAAGGTTCACTaGAGCCCAGGAATTAGACAC +
Preference number: 5 (lower is better)
Translates to: SLWSLNSHHVPEKNAPLSMQKVH*SPGIRH
Trigger: GTGTCTAATTCCTGGGCTCAAGTGAACCTTTTGCAT...CGAAAGAGGGGCATTCTTTTCTGGTACATGGTGAGAGTTCAGGCTCCAGAGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR CAA 90 bp CCATCTCTTCTCAGGAAGAGGTGGGCACAAGACACATCTGAGCCCCTTAGTATTTCAGAAGGGCTACATTaGGTTATTTCAGTCGTCCTA +
Preference number: 5 (lower is better)
Translates to: PSLLRKRWAQDTSEPLSISEGLH*VISVVL
Trigger: TAGGACGACTGAAATAACCAAATGTAGCCCTTCTGA...AATACTAAGGGGCTCAGATGTGTCTTGTGCCCACCTCTTCCTGAGAAGAGATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR CAA 90 bp CATCTCTTCTCAGGAAGAGGTGGGCACAAGACACATCTGAGCCCCTTAGTATTGGGGATCTTGTTACATTaGTCTGATGCTCAGAATCGT +
Preference number: 5 (lower is better)
Translates to: HLFSGRGGHKTHLSPLVLGILLH*SDAQNR
Trigger: ACGATTCTGAGCATCAGACAAATGTAACAAGATCCC...CAATACTAAGGGGCTCAGATGTGTCTTGTGCCCACCTCTTCCTGAGAAGAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR CAA 90 bp AGTCTCTGGAGCCTGAACTCTCACCATGTACCAGAAAAGAATGCCCCTCTTTCGGGGATCTTGTTACATTaGTCTGATGCTCAGAATCGT +
Preference number: 5 (lower is better)
Translates to: SLWSLNSHHVPEKNAPLSGILLH*SDAQNR
Trigger: ACGATTCTGAGCATCAGACAAATGTAACAAGATCCC...CGAAAGAGGGGCATTCTTTTCTGGTACATGGTGAGAGTTCAGGCTCCAGAGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR CAA 90 bp CGTTCAGAGTTTCTTGGGCTGCTTGTACTAGTCACAGCTCCACTTCCATCTCTTATGGGGTTGTTTCCTTaGAGTTTGAAGCAGCTTTCG +
Preference number: 5 (lower is better)
Translates to: RSEFLGLLVLVTAPLPSLMGLFP*SLKQLS
Trigger: CGAAAGCTGCTTCAAACTCAAAGGAAACAACCCCAT...AAGAGATGGAAGTGGAGCTGTGACTAGTACAAGCAGCCCAAGAAACTCTGAACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR CAA 90 bp TTTCTTGGGCTGCTTGTACTAGTCACAGCTCCACTTCCATCTCTTCTCAGGAAGATGGGGTTGTTTCCTTaGAGTTTGAAGCAGCTTTCG +
Preference number: 5 (lower is better)
Translates to: FLGLLVLVTAPLPSLLRKMGLFP*SLKQLS
Trigger: CGAAAGCTGCTTCAAACTCAAAGGAAACAACCCCAT...CTTCCTGAGAAGAGATGGAAGTGGAGCTGTGACTAGTACAAGCAGCCCAAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR CAA 90 bp AATGGGGTTGTTTCCTTTGAGTTTGAAGCAGCTTTCGAATGTGACTCCAGGGGGATGGGGTTGTTTCCTTaGAGTTTGAAGCAGCTTTCG +
Preference number: 5 (lower is better)
Translates to: NGVVSFEFEAAFECDSRGMGLFP*SLKQLS
Trigger: CGAAAGCTGCTTCAAACTCAAAGGAAACAACCCCAT...CCCCCTGGAGTCACATTCGAAAGCTGCTTCAAACTCAAAGGAAACAACCCCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000535850.5
ENST00000568027.5
CDS-3UTR CAA 90 bp CATCTCTTCTCAGGAAGAGGTGGGCACAAGACACATCTGAGCCCCTTAGTATTGTTTGTGCCAATGGGGTaGTTTCCTTTGAGTTTGAAG +
Preference number: 5 (lower is better)
Translates to: HLFSGRGGHKTHLSPLVLFVPMG*FPLSLK
Trigger: CTTCAAACTCAAAGGAAACAACCCCATTGGCACAAA...CAATACTAAGGGGCTCAGATGTGTCTTGTGCCCACCTCTTCCTGAGAAGAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR CAA 90 bp GAGTTTCTTGGGCTGCTTGTACTAGTCACAGCTCCACTTCCATCTCTTCTCAGGTTTGTGCCAATGGGGTaGTTTCCTTTGAGTTTGAAG +
Preference number: 5 (lower is better)
Translates to: EFLGLLVLVTAPLPSLLRFVPMG*FPLSLK
Trigger: CTTCAAACTCAAAGGAAACAACCCCATTGGCACAAA...CCTGAGAAGAGATGGAAGTGGAGCTGTGACTAGTACAAGCAGCCCAAGAAACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR CAA 90 bp TTCAGAGTTTCTTGGGCTGCTTGTACTAGTCACAGCTCCACTTCCATCTCTTCTAACCTGGACTGCATTTaGTGCCAATGGGGTTGTTTC +
Preference number: 5 (lower is better)
Translates to: FRVSWAACTSHSSTSISSNLDCI*CQWGCF
Trigger: GAAACAACCCCATTGGCACAAAATGCAGTCCAGGTT...AGAAGAGATGGAAGTGGAGCTGTGACTAGTACAAGCAGCCCAAGAAACTCTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR CAA 90 bp AATTATTTGCTCAAGTTTGCCTCCATTGGGCCCCGTTCAGAGTTTCTTGGGCTGCAGTCACTAAAGGTATaGTTCACAATGCACCTCAGC +
Preference number: 5 (lower is better)
Translates to: NYLLKFASIGPRSEFLGLQSLKV*FTMHLS
Trigger: GCTGAGGTGCATTGTGAACAATACCTTTAGTGACTG...CAGCCCAAGAAACTCTGAACGGGGCCCAATGGAGGCAAACTTGAGCAAATAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR CAA 90 bp TTTCTTGGGCTGCTTGTACTAGTCACAGCTCCACTTCCATCTCTTCTCAGGAAGCAGTCACTAAAGGTATaGTTCACAATGCACCTCAGC +
Preference number: 5 (lower is better)
Translates to: FLGLLVLVTAPLPSLLRKQSLKV*FTMHLS
Trigger: GCTGAGGTGCATTGTGAACAATACCTTTAGTGACTG...CTTCCTGAGAAGAGATGGAAGTGGAGCTGTGACTAGTACAAGCAGCCCAAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS CCA 90 bp GGACAGATCAAGAAGCTGTCACAGACGGCGGAAGAAAACCAGCAGTaGATCCAAACCAAGAAGAAATCCCTGATTTACCTATATACACCA +
Preference number: 5 (lower is better)
Translates to: GQIKKLSQTAEENQQ*IQTKKKSLIYLYTP
Trigger: TGGTGTATATAGGTAAATCAGGGATTTCTTCTTGGTTTGGATCCACTGCTGGTTTTCTTCCGCCGTCTGTGACAGCTTCTTGATCTGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562527.5
CDS-3UTR CAA 90 bp CGTTCAGAGTTTCTTGGGCTGCTTGTACTAGTCACAGCTCCACTTCCATCTCTTTCAGAAGGGCTACATTaGGTTATTTCAGTCGTCCTA +
Preference number: 5 (lower is better)
Translates to: RSEFLGLLVLVTAPLPSLSEGLH*VISVVL
Trigger: TAGGACGACTGAAATAACCAAATGTAGCCCTTCTGA...AAGAGATGGAAGTGGAGCTGTGACTAGTACAAGCAGCCCAAGAAACTCTGAACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR CAA 90 bp TCAGAGTTTCTTGGGCTGCTTGTACTAGTCACAGCTCCACTTCCATCTCTTCTCTCAGAAGGGCTACATTaGGTTATTTCAGTCGTCCTA +
Preference number: 5 (lower is better)
Translates to: SEFLGLLVLVTAPLPSLLSEGLH*VISVVL
Trigger: TAGGACGACTGAAATAACCAAATGTAGCCCTTCTGA...GAGAAGAGATGGAAGTGGAGCTGTGACTAGTACAAGCAGCCCAAGAAACTCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR CAA 90 bp TTTGCCTCCATTGGGCCCCGTTCAGAGTTTCTTGGGCTGCTTGTACTAGTCACAATTCTGTTGTTCTACTaGGCTTTTGGTACGAACAAA +
Preference number: 5 (lower is better)
Translates to: FASIGPRSEFLGLLVLVTILLFY*AFGTNK
Trigger: TTTGTTCGTACCAAAAGCCAAGTAGAACAACAGAAT...TGTGACTAGTACAAGCAGCCCAAGAAACTCTGAACGGGGCCCAATGGAGGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR CAA 90 bp CAAGTTTGCCTCCATTGGGCCCCGTTCAGAGTTTCTTGGGCTGCTTGTACTAGTATTCTGTTGTTCTACTaGGCTTTTGGTACGAACAAA +
Preference number: 5 (lower is better)
Translates to: QVCLHWAPFRVSWAACTSILLFY*AFGTNK
Trigger: TTTGTTCGTACCAAAAGCCAAGTAGAACAACAGAAT...ACTAGTACAAGCAGCCCAAGAAACTCTGAACGGGGCCCAATGGAGGCAAACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR CAA 90 bp TCCCAATTATTTGCTCAAGTTTGCCTCCATTGGGCCCCGTTCAGAGTTTCTTGGGGGATCTTGTTACATTaGTCTGATGCTCAGAATCGT +
Preference number: 5 (lower is better)
Translates to: SQLFAQVCLHWAPFRVSWGILLH*SDAQNR
Trigger: ACGATTCTGAGCATCAGACAAATGTAACAAGATCCC...CCAAGAAACTCTGAACGGGGCCCAATGGAGGCAAACTTGAGCAAATAATTGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR CAA 90 bp TCCCAATTATTTGCTCAAGTTTGCCTCCATTGGGCCCCGTTCAGAGTTTCTTGGTTTGTGCCAATGGGGTaGTTTCCTTTGAGTTTGAAG +
Preference number: 5 (lower is better)
Translates to: SQLFAQVCLHWAPFRVSWFVPMG*FPLSLK
Trigger: CTTCAAACTCAAAGGAAACAACCCCATTGGCACAAA...CCAAGAAACTCTGAACGGGGCCCAATGGAGGCAAACTTGAGCAAATAATTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR CAA 90 bp AATGGGGTTGTTTCCTTTGAGTTTGAAGCAGCTTTCGAATGTGACTCCAGGGGGTTTGTGCCAATGGGGTaGTTTCCTTTGAGTTTGAAG +
Preference number: 5 (lower is better)
Translates to: NGVVSFEFEAAFECDSRGFVPMG*FPLSLK
Trigger: CTTCAAACTCAAAGGAAACAACCCCATTGGCACAAA...CCCCCTGGAGTCACATTCGAAAGCTGCTTCAAACTCAAAGGAAACAACCCCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000535850.5
ENST00000568027.5
CDS-3UTR CAA 90 bp GAGTTTCTTGGGCTGCTTGTACTAGTCACAGCTCCACTTCCATCTCTTCTCAGGCTCAACTCAAACAGGTaGGGTAATGCTTTCATAAGA +
Preference number: 5 (lower is better)
Translates to: EFLGLLVLVTAPLPSLLRLNSNR*GNAFIR
Trigger: TCTTATGAAAGCATTACCCAACCTGTTTGAGTTGAG...CCTGAGAAGAGATGGAAGTGGAGCTGTGACTAGTACAAGCAGCCCAAGAAACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR CAA 90 bp TGTGCCAATGGGGTTGTTTCCTTTGAGTTTGAAGCAGCTTTCGAATGTGACTCCATGCAAAAGGTTCACTaGAGCCCAGGAATTAGACAC +
Preference number: 5 (lower is better)
Translates to: CANGVVSFEFEAAFECDSMQKVH*SPGIRH
Trigger: GTGTCTAATTCCTGGGCTCAAGTGAACCTTTTGCAT...GGAGTCACATTCGAAAGCTGCTTCAAACTCAAAGGAAACAACCCCATTGGCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535850.5
ENST00000568027.5
CDS CCA 90 bp GGACAGATCAAGAAGCTGTCACAGACGGCGGAAGAAAACCAGCAGTaGATCCAAACCAAGAAGAAATCCCTGATTTACCAGTTCTTAAAA +
Preference number: 5 (lower is better)
Translates to: GQIKKLSQTAEENQQ*IQTKKKSLIYQFLK
Trigger: TTTTAAGAACTGGTAAATCAGGGATTTCTTCTTGGTTTGGATCCACTGCTGGTTTTCTTCCGCCGTCTGTGACAGCTTCTTGATCTGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561932.5
CDS-3UTR CAA 90 bp TGTGCCAATGGGGTTGTTTCCTTTGAGTTTGAAGCAGCTTTCGAATGTGACTCCTCAGAAGGGCTACATTaGGTTATTTCAGTCGTCCTA +
Preference number: 5 (lower is better)
Translates to: CANGVVSFEFEAAFECDSSEGLH*VISVVL
Trigger: TAGGACGACTGAAATAACCAAATGTAGCCCTTCTGA...GGAGTCACATTCGAAAGCTGCTTCAAACTCAAAGGAAACAACCCCATTGGCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535850.5
ENST00000568027.5
CDS-3UTR CAA 90 bp GAGTTTCTTGGGCTGCTTGTACTAGTCACAGCTCCACTTCCATCTCTTCTCAGGATTCTGTTGTTCTACTaGGCTTTTGGTACGAACAAA +
Preference number: 5 (lower is better)
Translates to: EFLGLLVLVTAPLPSLLRILLFY*AFGTNK
Trigger: TTTGTTCGTACCAAAAGCCAAGTAGAACAACAGAAT...CCTGAGAAGAGATGGAAGTGGAGCTGTGACTAGTACAAGCAGCCCAAGAAACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR CAA 90 bp TGTGCCAATGGGGTTGTTTCCTTTGAGTTTGAAGCAGCTTTCGAATGTGACTCCGGGATCTTGTTACATTaGTCTGATGCTCAGAATCGT +
Preference number: 5 (lower is better)
Translates to: CANGVVSFEFEAAFECDSGILLH*SDAQNR
Trigger: ACGATTCTGAGCATCAGACAAATGTAACAAGATCCC...GGAGTCACATTCGAAAGCTGCTTCAAACTCAAAGGAAACAACCCCATTGGCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535850.5
ENST00000568027.5
CDS-3UTR CAA 90 bp TTTCTTGGGCTGCTTGTACTAGTCACAGCTCCACTTCCATCTCTTCTCAGGAAGCTCAACTCAAACAGGTaGGGTAATGCTTTCATAAGA +
Preference number: 5 (lower is better)
Translates to: FLGLLVLVTAPLPSLLRKLNSNR*GNAFIR
Trigger: TCTTATGAAAGCATTACCCAACCTGTTTGAGTTGAG...CTTCCTGAGAAGAGATGGAAGTGGAGCTGTGACTAGTACAAGCAGCCCAAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR CAA 90 bp TCCCAATTATTTGCTCAAGTTTGCCTCCATTGGGCCCCGTTCAGAGTTTCTTGGCTCAACTCAAACAGGTaGGGTAATGCTTTCATAAGA +
Preference number: 5 (lower is better)
Translates to: SQLFAQVCLHWAPFRVSWLNSNR*GNAFIR
Trigger: TCTTATGAAAGCATTACCCAACCTGTTTGAGTTGAG...CCAAGAAACTCTGAACGGGGCCCAATGGAGGCAAACTTGAGCAAATAATTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR CAA 90 bp CACCATGTACCAGAAAAGAATGCCCCTCTTTCGAACTTTCAAACAGTTGGGATTATTATTTGCTCAAGTTaGCCTCCATTGGGCCCCGTT +
Preference number: 5 (lower is better)
Translates to: HHVPEKNAPLSNFQTVGIIICSS*PPLGPV
Trigger: AACGGGGCCCAATGGAGGCAAACTTGAGCAAATAAT...AATCCCAACTGTTTGAAAGTTCGAAAGAGGGGCATTCTTTTCTGGTACATGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR CAA 90 bp AATGGGGTTGTTTCCTTTGAGTTTGAAGCAGCTTTCGAATGTGACTCCAGGGGGATTCTGTTGTTCTACTaGGCTTTTGGTACGAACAAA +
Preference number: 5 (lower is better)
Translates to: NGVVSFEFEAAFECDSRGILLFY*AFGTNK
Trigger: TTTGTTCGTACCAAAAGCCAAGTAGAACAACAGAAT...CCCCCTGGAGTCACATTCGAAAGCTGCTTCAAACTCAAAGGAAACAACCCCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000535850.5
ENST00000568027.5
CDS-3UTR CAA 90 bp AATGCCAAGGAAAACCATTCCGTTTTGAGTCTCTGGAGCCTGAACTCTCACCATATTCTGTTGTTCTACTaGGCTTTTGGTACGAACAAA +
Preference number: 5 (lower is better)
Translates to: NAKENHSVLSLWSLNSHHILLFY*AFGTNK
Trigger: TTTGTTCGTACCAAAAGCCAAGTAGAACAACAGAAT...ATGGTGAGAGTTCAGGCTCCAGAGACTCAAAACGGAATGGTTTTCCTTGGCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR CAA 90 bp CCATGTACCAGAAAAGAATGCCCCTCTTTCGAACTTTCAAACAGTTGGGATTATATGCAAAAGGTTCACTaGAGCCCAGGAATTAGACAC +
Preference number: 5 (lower is better)
Translates to: PCTRKECPSFELSNSWDYMQKVH*SPGIRH
Trigger: GTGTCTAATTCCTGGGCTCAAGTGAACCTTTTGCAT...ATAATCCCAACTGTTTGAAAGTTCGAAAGAGGGGCATTCTTTTCTGGTACATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR CAA 90 bp GTACCAGAAAAGAATGCCCCTCTTTCGAACTTTCAAACAGTTGGGATTATTTTTATTATTTGCTCAAGTTaGCCTCCATTGGGCCCCGTT +
Preference number: 5 (lower is better)
Translates to: VPEKNAPLSNFQTVGIIFIICSS*PPLGPV
Trigger: AACGGGGCCCAATGGAGGCAAACTTGAGCAAATAAT...AAAAATAATCCCAACTGTTTGAAAGTTCGAAAGAGGGGCATTCTTTTCTGGTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR CAA 90 bp GTACCAGAAAAGAATGCCCCTCTTTCGAACTTTCAAACAGTTGGGATTATTTTTGAAAACCATTCCGTTTaGAGTCTCTGGAGCCTGAAC +
Preference number: 5 (lower is better)
Translates to: VPEKNAPLSNFQTVGIIFENHSV*SLWSLN
Trigger: GTTCAGGCTCCAGAGACTCAAAACGGAATGGTTTTC...AAAAATAATCCCAACTGTTTGAAAGTTCGAAAGAGGGGCATTCTTTTCTGGTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS GCA 90 bp TATAAGAGAGCTATGATATATGCAGAAGCAAAGGTGCAGGGATCATaGAATAGTTTCGTACCAGATTTCAAGATACCAAGTAGCAAGGAA +
Preference number: 5 (lower is better)
Translates to: YKRAMIYAEAKVQGS*NSFVPDFKIPSSKE
Trigger: TTCCTTGCTACTTGGTATCTTGAAATCTGGTACGAAACTATTGCATGATCCCTGCACCTTTGCTTCTGCATATATCATAGCTCTCTTATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562396.1
ENST00000566316.5
ENST00000570163.1
CDS-3UTR CAA 90 bp GTACCAGAAAAGAATGCCCCTCTTTCGAACTTTCAAACAGTTGGGATTATTTTTGGGATCTTGTTACATTaGTCTGATGCTCAGAATCGT +
Preference number: 5 (lower is better)
Translates to: VPEKNAPLSNFQTVGIIFGILLH*SDAQNR
Trigger: ACGATTCTGAGCATCAGACAAATGTAACAAGATCCC...AAAAATAATCCCAACTGTTTGAAAGTTCGAAAGAGGGGCATTCTTTTCTGGTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR CAA 90 bp TGTACCAGAAAAGAATGCCCCTCTTTCGAACTTTCAAACAGTTGGGATTATTTTTTTGTGCCAATGGGGTaGTTTCCTTTGAGTTTGAAG +
Preference number: 5 (lower is better)
Translates to: CTRKECPSFELSNSWDYFFVPMG*FPLSLK
Trigger: CTTCAAACTCAAAGGAAACAACCCCATTGGCACAAA...AAAATAATCCCAACTGTTTGAAAGTTCGAAAGAGGGGCATTCTTTTCTGGTACA
39% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS GCA 90 bp ACTATTCAGTACAACTGTCCTCTTCTTCCATACATATTAACCATATaGAAGTCTTCAGAACAGAAAAAGCCATTGTGTCGTAAAGGAAGG +
Preference number: 5 (lower is better)
Translates to: TIQYNCPLLPYILTI*KSSEQKKPLCRKGR
Trigger: CCTTCCTTTACGACACAATGGCTTTTTCTGTTCTGAAGACTTGCATATGGTTAATATGTATGGAAGAAGAGGACAGTTGTACTGAATAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562396.1
CDS-3UTR CAA 90 bp TGTACCAGAAAAGAATGCCCCTCTTTCGAACTTTCAAACAGTTGGGATTATTTTCTCAACTCAAACAGGTaGGGTAATGCTTTCATAAGA +
Preference number: 5 (lower is better)
Translates to: CTRKECPSFELSNSWDYFLNSNR*GNAFIR
Trigger: TCTTATGAAAGCATTACCCAACCTGTTTGAGTTGAG...AAAATAATCCCAACTGTTTGAAAGTTCGAAAGAGGGGCATTCTTTTCTGGTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS-3UTR CAA 90 bp GTACCAGAAAAGAATGCCCCTCTTTCGAACTTTCAAACAGTTGGGATTATTTTTATTCTGTTGTTCTACTaGGCTTTTGGTACGAACAAA +
Preference number: 5 (lower is better)
Translates to: VPEKNAPLSNFQTVGIIFILLFY*AFGTNK
Trigger: TTTGTTCGTACCAAAAGCCAAGTAGAACAACAGAAT...AAAAATAATCCCAACTGTTTGAAAGTTCGAAAGAGGGGCATTCTTTTCTGGTAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000324570.9
ENST00000356427.2
ENST00000396559.5
ENST00000396560.6
ENST00000568027.5
CDS TCA 72 bp CCCTCCGCAGTCCCTAACCCCAGTGCCGCCCGGACCTaGGGCCGCACACCACTCCCGCTTCACCAGTATCCC +
Preference number: 6 (lower is better)
Translates to: PSAVPNPSAART*GRTPLPLHQYP
Trigger: GGGATACTGGTGAAGCGGGAGTGGTGTGCGGCCTCAGGTCCGGGCGGCACTGGGGTTAGGGACTGCGGAGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562396.1
CDS GCA 72 bp AGGCCGCACACCACTCCCGCTTCACCAGTATCCCTCTaGGAAAACGGTGGAGACGCGCCCGTCCGCCCCTCA +
Preference number: 6 (lower is better)
Translates to: RPHTTPASPVSL*ENGGDAPVRPS
Trigger: TGAGGGGCGGACGGGCGCGTCTCCACCGTTTTCGCAGAGGGATACTGGTGAAGCGGGAGTGGTGTGCGGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562396.1
CDS TCA 72 bp TCTGCATTCAAGGTGTTGGTCGGGCCATGCTTGCTCTaGAGGCCTCAGGGGAGGATCCTTCCTCACCTCTTC +
Preference number: 6 (lower is better)
Translates to: SAFKVLVGPCLL*RPQGRILPHLF
Trigger: GAAGAGGTGAGGAAGGATCCTCCCCTGAGGCCTTCAGAGCAAGCATGGCCCGACCAACACCTTGAATGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564797.5
CDS TCA 72 bp GAAATCCCTGATTTACCTGCCAGCCTTGGCTGCTTGTaGTTTCATGAGGCCCGATGCCTTAGGTGGCTGTGC +
Preference number: 6 (lower is better)
Translates to: EIPDLPASLGCL*FHEARCLRWLC
Trigger: GCACAGCCACCTAAGGCATCGGGCCTCATGAAATCACAAGCAGCCAAGGCTGGCAGGTAAATCAGGGATTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564797.5
CDS TCA 72 bp CTAGAAAGGTGGCTCCAGGTGTTCCTTGGCATTCCTTaGTCTGCAGCTGTATCACTCCAAGGCCAAGGCACT +
Preference number: 6 (lower is better)
Translates to: LERWLQVFLGIP*SAAVSLQGQGT
Trigger: AGTGCCTTGGCCTTGGAGTGATACAGCTGCAGATCAAGGAATGCCAAGGAACACCTGGAGCCACCTTTCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564797.5
CDS CAA 72 bp TCTAGAAAGGTGGCTCCAGGTGTTCCTTGGCATTCCTaGATCTGCAGCTGTATCACTCCAAGGCCAAGGCAC +
Preference number: 6 (lower is better)
Translates to: SRKVAPGVPWHS*ICSCITPRPRH
Trigger: GTGCCTTGGCCTTGGAGTGATACAGCTGCAGATCAAGGAATGCCAAGGAACACCTGGAGCCACCTTTCTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564797.5
CDS CAA 72 bp CAACAGGTGGTCACTGAATGCCCAAGTTTAGAAGGCTaGGAGTCTGCATTCAAGGTGTTGGTCGGGCCATGC +
Preference number: 6 (lower is better)
Translates to: QQVVTECPSLEG*ESAFKVLVGPC
Trigger: GCATGGCCCGACCAACACCTTGAATGCAGACTCCAAGCCTTCTAAACTTGGGCATTCAGTGACCACCTGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564797.5
CDS CAA 90 bp CTCACCTCTTCTAGAAAGGTGGCTCCAGGTGTTCCTTGGCATTCCTaGATCTGCAGCTGTATCACTCCAAGGCCAAGGCACTTTGTCCCT +
Preference number: 6 (lower is better)
Translates to: LTSSRKVAPGVPWHS*ICSCITPRPRHFVP
Trigger: AGGGACAAAGTGCCTTGGCCTTGGAGTGATACAGCTGCAGATCAAGGAATGCCAAGGAACACCTGGAGCCACCTTTCTAGAAGAGGTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564797.5
CDS CAA 90 bp GCAGCTGTATCACTCCAAGGCCAAGGCACTTTGTCCCTTAAAGGCTaGCTGAAAAATCTCTTGTACCTGATGGATCAGCTGGTACCACCC +
Preference number: 6 (lower is better)
Translates to: AAVSLQGQGTLSLKG*LKNLLYLMDQLVPP
Trigger: GGGTGGTACCAGCTGATCCATCAGGTACAAGAGATTTTTCAGCAAGCCTTTAAGGGACAAAGTGCCTTGGCCTTGGAGTGATACAGCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564797.5
CDS CAA 90 bp CAAGGCCAAGGCACTTTGTCCCTTAAAGGCTTGCTGAAAAATCTCTaGTACCTGATGGATCAGCTGGTACCACCCAGATCGATAGACTGG +
Preference number: 6 (lower is better)
Translates to: QGQGTLSLKGLLKNL*YLMDQLVPPRSIDW
Trigger: CCAGTCTATCGATCTGGGTGGTACCAGCTGATCCATCAGGTACAAGAGATTTTTCAGCAAGCCTTTAAGGGACAAAGTGCCTTGGCCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564797.5
CDS CAA 72 bp GGCACTTTGTCCCTTAAAGGCTTGCTGAAAAATCTCTaGTACCTGATGGATCAGCTGGTACCACCCAGATCG +
Preference number: 6 (lower is better)
Translates to: GTLSLKGLLKNL*YLMDQLVPPRS
Trigger: CGATCTGGGTGGTACCAGCTGATCCATCAGGTACAAGAGATTTTTCAGCAAGCCTTTAAGGGACAAAGTGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564797.5
CDS CCA 72 bp AAGAAGCTGTCACAGACGGCGGAAGAAAACCAGCAGTaGATCCAAACCAAGAAGAAATCCCTGATTTACCAG +
Preference number: 6 (lower is better)
Translates to: KKLSQTAEENQQ*IQTKKKSLIYQ
Trigger: CTGGTAAATCAGGGATTTCTTCTTGGTTTGGATCCACTGCTGGTTTTCTTCCGCCGTCTGTGACAGCTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561932.5
CDS CCA 72 bp AAGAAGCTGTCACAGACGGCGGAAGAAAACCAGCAGTaGATCCAAACCAAGAAGAAATCCCTGATTTACCTG +
Preference number: 6 (lower is better)
Translates to: KKLSQTAEENQQ*IQTKKKSLIYL
Trigger: CAGGTAAATCAGGGATTTCTTCTTGGTTTGGATCCACTGCTGGTTTTCTTCCGCCGTCTGTGACAGCTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564797.5
CDS CAA 72 bp TCACTCCAAGGCCAAGGCACTTTGTCCCTTAAAGGCTaGCTGAAAAATCTCTTGTACCTGATGGATCAGCTG +
Preference number: 6 (lower is better)
Translates to: SLQGQGTLSLKG*LKNLLYLMDQL
Trigger: CAGCTGATCCATCAGGTACAAGAGATTTTTCAGCAAGCCTTTAAGGGACAAAGTGCCTTGGCCTTGGAGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564797.5
CDS CCA 72 bp AAGAAGCTGTCACAGACGGCGGAAGAAAACCAGCAGTaGATCCAAACCAAGAAGAAATCCCTGATTTACCTA +
Preference number: 6 (lower is better)
Translates to: KKLSQTAEENQQ*IQTKKKSLIYL
Trigger: TAGGTAAATCAGGGATTTCTTCTTGGTTTGGATCCACTGCTGGTTTTCTTCCGCCGTCTGTGACAGCTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562102.5
ENST00000562527.5
CDS TCA 72 bp AAAATTGGTGGAGGTGGAGATTTATCCGTTAATTTCTaGAAGCATTCCGGACAAGAGCGAGCTTTTACTTAC +
Preference number: 6 (lower is better)
Translates to: KIGGGGDLSVNF*KHSGQERAFTY
Trigger: GTAAGTAAAAGCTCGCTCTTGTCCGGAATGCTTTCAGAAATTAACGGATAAATCTCCACCTCCACCAATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562396.1
CDS CAA 90 bp CCATACATATTAACCATATGCAAGTCTTCAGAACAGAAAAAGCCATaGTGTCGTAAAGGAAGGAACACGTGGTTAGAAACTTCATTTTCA +
Preference number: 6 (lower is better)
Translates to: PYILTICKSSEQKKP*CRKGRNTWLETSFS
Trigger: TGAAAATGAAGTTTCTAACCACGTGTTCCTTCCTTTACGACACAATGGCTTTTTCTGTTCTGAAGACTTGCATATGGTTAATATGTATGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562396.1
CDS CAA 90 bp GAAGTAAATTTGATTAAGATCGGAGTCAACACTTCTACAAACGTATaGCAGAATAAACGAGCTAAGAAGAAAGGCATACTTCACAAAAGC +
Preference number: 6 (lower is better)
Translates to: EVNLIKIGVNTSTNV*QNKRAKKKGILHKS
Trigger: GCTTTTGTGAAGTATGCCTTTCTTCTTAGCTCGTTTATTCTGCAATACGTTTGTAGAAGTGTTGACTCCGATCTTAATCAAATTTACTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562396.1
CDS CAA 72 bp TTGATTAAGATCGGAGTCAACACTTCTACAAACGTATaGCAGAATAAACGAGCTAAGAAGAAAGGCATACTT +
Preference number: 6 (lower is better)
Translates to: LIKIGVNTSTNV*QNKRAKKKGIL
Trigger: AAGTATGCCTTTCTTCTTAGCTCGTTTATTCTGCAATACGTTTGTAGAAGTGTTGACTCCGATCTTAATCAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562396.1
CDS CAA 72 bp TACATATCTGCAGATAAGACTGAGAGTGAAGTAAATTaGATTAAGATCGGAGTCAACACTTCTACAAACGTA +
Preference number: 6 (lower is better)
Translates to: YISADKTESEVN*IKIGVNTSTNV
Trigger: TACGTTTGTAGAAGTGTTGACTCCGATCTTAATCAAATTTACTTCACTCTCAGTCTTATCTGCAGATATGTA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562396.1