RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ATF7IP (Homo sapiens)

Ensembl gene IDs: ENSG00000171681

Ensembl transcript IDs: ENST00000261168.8, ENST00000261168.9, ENST00000396279.2, ENST00000428217.6, ENST00000534828.1, ENST00000535132.1, ENST00000535179.1, ENST00000535738.1, ENST00000536279.1, ENST00000536444.5, ENST00000537653.5, ENST00000538511.5, ENST00000539057.1, ENST00000539659.5, ENST00000540793.5, ENST00000541056.1, ENST00000541654.1, ENST00000542514.5, ENST00000542967.1, ENST00000542991.1, ENST00000543189.5, ENST00000544627.5, ENST00000545723.1, ENST00000545769.1

Found 855 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGAGACTGGCTAGCCTTCCAGCCTACATCTTTCTCCTGTGCTGGATaGTTCCTGCCCTTCGACACTGGACTCCAAATTCTTCAGTTTGGG +
Preference number: 1 (lower is better)
Translates to: RDWLAFQPTSFSCAG*FLPFDTGLQILQFG
Trigger: CCCAAACTGAAGAATTTGGAGTCCAGTGTCGAAGGGCAGGAAGCATCCAGCACAGGAGAAAGATGTAGGCTGGAAGGCTAGCCAGTCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543189.5
3UTR CCA 90 bp GCCTACATCTTTCTCCTGTGCTGGATGCTTCCTGCCCTTCGACACTaGACTCCAAATTCTTCAGTTTGGGGATTCAGTCTGGCTTTCCTT +
Preference number: 1 (lower is better)
Translates to: AYIFLLCWMLPALRH*TPNSSVWGFSLAFL
Trigger: AAGGAAAGCCAGACTGAATCCCCAAACTGAAGAATTTGGAGTCCAGTGTCGAAGGGCAGGAAGCATCCAGCACAGGAGAAAGATGTAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543189.5
3UTR GCA 90 bp CTGGACTCCAAATTCTTCAGTTTGGGGATTCAGTCTGGCTTTCCTTaGTCAGCTTGCAGACAGCCTATTGAGGGACCTTGTGATCATGTA +
Preference number: 1 (lower is better)
Translates to: LDSKFFSLGIQSGFP*SACRQPIEGPCDHV
Trigger: TACATGATCACAAGGTCCCTCAATAGGCTGTCTGCAAGCTGAGCAAGGAAAGCCAGACTGAATCCCCAAACTGAAGAATTTGGAGTCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543189.5
3UTR CCA 90 bp CAGGCAGAAAATGGGCTGGAGAAGGCAGATCCACCTTTAATCTGGTaGGCACAATCTAATCAGCTGTCAATGAATACAAAGCAGGCAGAA +
Preference number: 1 (lower is better)
Translates to: QAENGLEKADPPLIW*AQSNQLSMNTKQAE
Trigger: TTCTGCCTGCTTTGTATTCATTGACAGCTGATTAGATTGTGCCCACCAGATTAAAGGTGGATCTGCCTTCTCCAGCCCATTTTCTGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543189.5
3UTR CCA 90 bp AAGCAGGCAGAAAATGGGCTGGAGAAGGCAGATCCACCTTTAATCTaGTGGGCACAATCTAATCAGCTGTCAATGAATACAAAGCAGGCA +
Preference number: 1 (lower is better)
Translates to: KQAENGLEKADPPLI*WAQSNQLSMNTKQA
Trigger: TGCCTGCTTTGTATTCATTGACAGCTGATTAGATTGTGCCCACCAGATTAAAGGTGGATCTGCCTTCTCCAGCCCATTTTCTGCCTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543189.5
3UTR TCA 90 bp ACACCAGTACAGCTGGCCCTCATATTAAAAATCCATGACCTAAGCTaGATTTTAATAACTTTGAAGAGGAACAGAGAGATACACAGGAGG +
Preference number: 1 (lower is better)
Translates to: TPVQLALILKIHDLS*ILITLKRNREIHRR
Trigger: CCTCCTGTGTATCTCTCTGTTCCTCTTCAAAGTTATTAAAATTCAGCTTAGGTCATGGATTTTTAATATGAGGGCCAGCTGTACTGGTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261168.8
ENST00000536444.5
3UTR GCA 90 bp ATCAGGTTTCCAGAATTTCCAATAAGGCAATACCTACACAAATATTaGCAGGCTAAAAATGTAGCAAACTTGCATTCCCAAACTGGGAGA +
Preference number: 1 (lower is better)
Translates to: IRFPEFPIRQYLHKY*QAKNVANLHSQTGR
Trigger: TCTCCCAGTTTGGGAATGCAAGTTTGCTACATTTTTAGCCTGGCAATATTTGTGTAGGTATTGCCTTATTGGAAATTCTGGAAACCTGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261168.8
ENST00000536444.5
3UTR GCA 90 bp ATAAACATCACCATTACCTTTAAATGCCATACAAACATCCTACATTaGAGGTTGCAGTATCAGGTTTCCAGAATTTCCAATAAGGCAATA +
Preference number: 1 (lower is better)
Translates to: INITITFKCHTNILH*RLQYQVSRISNKAI
Trigger: TATTGCCTTATTGGAAATTCTGGAAACCTGATACTGCAACCTGCAATGTAGGATGTTTGTATGGCATTTAAAGGTAATGGTGATGTTTAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261168.8
ENST00000536444.5
3UTR-3UTR CCA 90 bp GGAACACCTCTCTGTGAGGCAAATGGTATCTCAACAAATACCGACTTTTCAAGGGTAATCGCAGCACTCTaGGAGGCCGAGGCGGGTGGA +
Preference number: 2 (lower is better)
Translates to: GTPLCEANGISTNTDFSRVIAAL*EAEAGG
Trigger: TCCACCCGCCTCGGCCTCCCAGAGTGCTGCGATTAC...CCTTGAAAAGTCGGTATTTGTTGAGATACCATTTGCCTCACAGAGAGGTGTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261168.8
ENST00000536444.5
3UTR-3UTR TCA 90 bp GGAACACCTCTCTGTGAGGCAAATGGTATCTCAACAAATACCGACTTTTCAAGGGACAGAAGAATTGCTTaGACCCAGGAGGCAGAGGTT +
Preference number: 2 (lower is better)
Translates to: GTPLCEANGISTNTDFSRDRRIA*TQEAEV
Trigger: AACCTCTGCCTCCTGGGTTCAAGCAATTCTTCTGTC...CCTTGAAAAGTCGGTATTTGTTGAGATACCATTTGCCTCACAGAGAGGTGTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261168.8
ENST00000536444.5
3UTR-3UTR TCA 90 bp ACATATCAACATTGCAACCACTGCAGGTCAAAACATATACATGCAGATATAGACTCCAGCCTTGCCTCCTaGGTAGCTGGGATTACAGGC +
Preference number: 2 (lower is better)
Translates to: TYQHCNHCRSKHIHADIDSSLAS*VAGITG
Trigger: GCCTGTAATCCCAGCTACTCAGGAGGCAAGGCTGGA...GTCTATATCTGCATGTATATGTTTTGACCTGCAGTGGTTGCAATGTTGATATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261168.8
ENST00000536444.5
3UTR-3UTR TCA 90 bp TGCCCTTCGACACTGGACTCCAAATTCTTCAGTTTGGGGATTCAGTCTGGCTTTAACAGTGGTTACCTTTaGTGGAAAGGAAAAGGGATG +
Preference number: 2 (lower is better)
Translates to: CPSTLDSKFFSLGIQSGFNSGYL*WKGKGM
Trigger: CATCCCTTTTCCTTTCCATCAAAGGTAACCACTGTT...AAAGCCAGACTGAATCCCCAAACTGAAGAATTTGGAGTCCAGTGTCGAAGGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543189.5
3UTR-3UTR TCA 90 bp CTTCAAAACCCTAATAAAAATAGGGCCACTTGCTGGAGCCCAGTTTGTATTAGAGACAGAAGAATTGCTTaGACCCAGGAGGCAGAGGTT +
Preference number: 2 (lower is better)
Translates to: LQNPNKNRATCWSPVCIRDRRIA*TQEAEV
Trigger: AACCTCTGCCTCCTGGGTTCAAGCAATTCTTCTGTC...TCTAATACAAACTGGGCTCCAGCAAGTGGCCCTATTTTTATTAGGGTTTTGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261168.8
ENST00000536444.5
3UTR-3UTR TCA 90 bp TGCCCTTCGACACTGGACTCCAAATTCTTCAGTTTGGGGATTCAGTCTGGCTTTATGGCTAAATCTAGCTaGCATATGCATGATCTCACA +
Preference number: 2 (lower is better)
Translates to: CPSTLDSKFFSLGIQSGFMAKSS*HMHDLT
Trigger: TGTGAGATCATGCATATGTCAGCTAGATTTAGCCAT...AAAGCCAGACTGAATCCCCAAACTGAAGAATTTGGAGTCCAGTGTCGAAGGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543189.5
3UTR-3UTR CCA 90 bp CTTCAAAACCCTAATAAAAATAGGGCCACTTGCTGGAGCCCAGTTTGTATTAGATCTTGTCTCCCAGGATaGAGTGCAATGGCGCAATCT +
Preference number: 2 (lower is better)
Translates to: LQNPNKNRATCWSPVCIRSCLPG*SAMAQS
Trigger: AGATTGCGCCATTGCACTCCATCCTGGGAGACAAGA...TCTAATACAAACTGGGCTCCAGCAAGTGGCCCTATTTTTATTAGGGTTTTGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261168.8
ENST00000536444.5
3UTR-3UTR CCA 90 bp TCAGTTTGGGGATTCAGTCTGGCTTTCCTTGCTCAGCTTGCAGACAGCCTATTGATGATTTCCATCATCTaGGGTAAATCACAATTGACC +
Preference number: 2 (lower is better)
Translates to: SVWGFSLAFLAQLADSLLMISII*GKSQLT
Trigger: GGTCAATTGTGATTTACCCCAGATGATGGAAATCAT...CAATAGGCTGTCTGCAAGCTGAGCAAGGAAAGCCAGACTGAATCCCCAAACTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543189.5
3UTR-3UTR GCA 90 bp TCTTCAGTTTGGGGATTCAGTCTGGCTTTCCTTGCTCAGCTTGCAGACAGCCTAAATCTAGCTGACATATaGATGATCTCACATACTTAC +
Preference number: 2 (lower is better)
Translates to: SSVWGFSLAFLAQLADSLNLADI*MISHTY
Trigger: GTAAGTATGTGAGATCATGCATATGTCAGCTAGATT...TAGGCTGTCTGCAAGCTGAGCAAGGAAAGCCAGACTGAATCCCCAAACTGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543189.5
3UTR-3UTR GCA 90 bp TCTTCAGTTTGGGGATTCAGTCTGGCTTTCCTTGCTCAGCTTGCAGACAGCCTAAACATGTTTGAAATATaGATACACTGCAGAATGGCT +
Preference number: 2 (lower is better)
Translates to: SSVWGFSLAFLAQLADSLNMFEI*IHCRMA
Trigger: AGCCATTCTGCAGTGTATGCATATTTCAAACATGTT...TAGGCTGTCTGCAAGCTGAGCAAGGAAAGCCAGACTGAATCCCCAAACTGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543189.5
3UTR-3UTR CCA 90 bp GTGATAAAACAACAAAATCTTAGGATGTTGAGGATACTGAATTGGCCCAAGAAACAATGGGGATGGGAGTaGGGAACACCTCTCTGTGAG +
Preference number: 2 (lower is better)
Translates to: VIKQQNLRMLRILNWPKKQWGWE*GTPLCE
Trigger: CTCACAGAGAGGTGTTCCCCACTCCCATCCCCATTG...TTTCTTGGGCCAATTCAGTATCCTCAACATCCTAAGATTTTGTTGTTTTATCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261168.8
ENST00000536444.5
3UTR-3UTR TCA 90 bp GTGATAAAACAACAAAATCTTAGGATGTTGAGGATACTGAATTGGCCCAAGAAACATGCCCGGCTAAGATaGGACTATGCATGCACCTGT +
Preference number: 2 (lower is better)
Translates to: VIKQQNLRMLRILNWPKKHARLR*DYACTC
Trigger: ACAGGTGCATGCATAGTCTCATCTTAGCCGGGCATG...TTTCTTGGGCCAATTCAGTATCCTCAACATCCTAAGATTTTGTTGTTTTATCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261168.8
ENST00000536444.5
3UTR-3UTR CCA 90 bp GGAACACCTCTCTGTGAGGCAAATGGTATCTCAACAAATACCGACTTTTCAAGGACATCAGACTCAACTTaGCACCATCAAAACAAAGTT +
Preference number: 2 (lower is better)
Translates to: GTPLCEANGISTNTDFSRTSDST*HHQNKV
Trigger: AACTTTGTTTTGATGGTGCCAAGTTGAGTCTGATGT...CCTTGAAAAGTCGGTATTTGTTGAGATACCATTTGCCTCACAGAGAGGTGTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261168.8
ENST00000536444.5
3UTR-3UTR CCA 90 bp GTGATAAAACAACAAAATCTTAGGATGTTGAGGATACTGAATTGGCCCAAGAAATCTTGTCTCCCAGGATaGAGTGCAATGGCGCAATCT +
Preference number: 2 (lower is better)
Translates to: VIKQQNLRMLRILNWPKKSCLPG*SAMAQS
Trigger: AGATTGCGCCATTGCACTCCATCCTGGGAGACAAGA...TTTCTTGGGCCAATTCAGTATCCTCAACATCCTAAGATTTTGTTGTTTTATCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261168.8
ENST00000536444.5
3UTR-3UTR CCA 90 bp AACACCCACACATATTCCCCAGCCTCAAAACTAAAGCAAGGTACACATTTACATAAATCTTGCACAAGGTaGATTTTACATGGGGTATCA +
Preference number: 2 (lower is better)
Translates to: NTHTYSPASKLKQGTHLHKSCTR*ILHGVS
Trigger: TGATACCCCATGTAAAATCCACCTTGTGCAAGATTT...ATGTAAATGTGTACCTTGCTTTAGTTTTGAGGCTGGGGAATATGTGTGGGTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000261168.8
ENST00000536444.5
ENST00000544627.5
3UTR CAA 90 bp GCCTTCAGTTTTGTAGACAGGAATAATCTTGAACACATATCAACATaGCAACCACTGCAGGTCAAAACATATACATGCAGATATAGACAG +
Preference number: 2 (lower is better)
Translates to: AFSFVDRNNLEHIST*QPLQVKTYTCRYRQ
Trigger: CTGTCTATATCTGCATGTATATGTTTTGACCTGCAGTGGTTGCAATGTTGATATGTGTTCAAGATTATTCCTGTCTACAAAACTGAAGGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261168.8
ENST00000536444.5
3UTR-3UTR GCA 90 bp CTTCAAAACCCTAATAAAAATAGGGCCACTTGCTGGAGCCCAGTTTGTATTAGAGTCAAAACATATACATaGAGATATAGACAGGTGTTC +
Preference number: 2 (lower is better)
Translates to: LQNPNKNRATCWSPVCIRVKTYT*RYRQVF
Trigger: GAACACCTGTCTATATCTGCATGTATATGTTTTGAC...TCTAATACAAACTGGGCTCCAGCAAGTGGCCCTATTTTTATTAGGGTTTTGAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261168.8
ENST00000536444.5
3UTR-3UTR CCA 90 bp ACATATCAACATTGCAACCACTGCAGGTCAAAACATATACATGCAGATATAGACACATCAGACTCAACTTaGCACCATCAAAACAAAGTT +
Preference number: 2 (lower is better)
Translates to: TYQHCNHCRSKHIHADIDTSDST*HHQNKV
Trigger: AACTTTGTTTTGATGGTGCCAAGTTGAGTCTGATGT...GTCTATATCTGCATGTATATGTTTTGACCTGCAGTGGTTGCAATGTTGATATGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261168.8
ENST00000536444.5
3UTR-3UTR GCA 90 bp TTTCACCTAATTAACAACTCAGGAGACCAGACAAAAGAAACAACAAATAGATCCCTGTCCAAGAAATCTTaGACAAGGTGGATTTTACAT +
Preference number: 2 (lower is better)
Translates to: FHLINNSGDQTKETTNRSLSKKS*TRWILH
Trigger: ATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAG...GGATCTATTTGTTGTTTCTTTTGTCTGGTCTCCTGAGTTGTTAATTAGGTGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261168.8
ENST00000536444.5
ENST00000544627.5
3UTR-3UTR CCA 90 bp AATGAAAATGGGAGACTCCAATGCAATAACACCTACATAAGGAAAAACACACATAAATCTTGCACAAGGTaGATTTTACATGGGGTATCA +
Preference number: 2 (lower is better)
Translates to: NENGRLQCNNTYIRKNTHKSCTR*ILHGVS
Trigger: TGATACCCCATGTAAAATCCACCTTGTGCAAGATTT...ATGTGTGTTTTTCCTTATGTAGGTGTTATTGCATTGGAGTCTCCCATTTTCATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000261168.8
ENST00000536444.5
ENST00000544627.5
3UTR-3UTR GCA 90 bp GTGATAAAACAACAAAATCTTAGGATGTTGAGGATACTGAATTGGCCCAAGAAATACCTACACAAATATTaGCAGGCTAAAAATGTAGCA +
Preference number: 2 (lower is better)
Translates to: VIKQQNLRMLRILNWPKKYLHKY*QAKNVA
Trigger: TGCTACATTTTTAGCCTGGCAATATTTGTGTAGGTA...TTTCTTGGGCCAATTCAGTATCCTCAACATCCTAAGATTTTGTTGTTTTATCAC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261168.8
ENST00000536444.5
3UTR GCA 72 bp AGACTGGCTAGCCTTCCAGCCTACATCTTTCTCCTGTaGTGGATGCTTCCTGCCCTTCGACACTGGACTCCA +
Preference number: 3 (lower is better)
Translates to: RLASLPAYIFLL*WMLPALRHWTP
Trigger: TGGAGTCCAGTGTCGAAGGGCAGGAAGCATCCAGCACAGGAGAAAGATGTAGGCTGGAAGGCTAGCCAGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543189.5
3UTR CCA 72 bp CTGGCTAGCCTTCCAGCCTACATCTTTCTCCTGTGCTaGATGCTTCCTGCCCTTCGACACTGGACTCCAAAT +
Preference number: 3 (lower is better)
Translates to: LASLPAYIFLLC*MLPALRHWTPN
Trigger: ATTTGGAGTCCAGTGTCGAAGGGCAGGAAGCATCCAGCACAGGAGAAAGATGTAGGCTGGAAGGCTAGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543189.5
3UTR GCA 72 bp CTAGCCTTCCAGCCTACATCTTTCTCCTGTGCTGGATaGTTCCTGCCCTTCGACACTGGACTCCAAATTCTT +
Preference number: 3 (lower is better)
Translates to: LAFQPTSFSCAG*FLPFDTGLQIL
Trigger: AAGAATTTGGAGTCCAGTGTCGAAGGGCAGGAAGCATCCAGCACAGGAGAAAGATGTAGGCTGGAAGGCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543189.5
3UTR-3UTR CAA 90 bp GGAACACCTCTCTGTGAGGCAAATGGTATCTCAACAAATACCGACTTTTCAAGGGGCAGAGTTTCGCTCTaGTCTCCCAGGATGGAGTGC +
Preference number: 3 (lower is better)
Translates to: GTPLCEANGISTNTDFSRGRVSL*SPRMEC
Trigger: GCACTCCATCCTGGGAGACAAGAGCGAAACTCTGCC...CCTTGAAAAGTCGGTATTTGTTGAGATACCATTTGCCTCACAGAGAGGTGTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261168.8
ENST00000536444.5
3UTR GCA 72 bp TCCAGCCTACATCTTTCTCCTGTGCTGGATGCTTCCTaGCCTTCGACACTGGACTCCAAATTCTTCAGTTTG +
Preference number: 3 (lower is better)
Translates to: SSLHLSPVLDAS*PSTLDSKFFSL
Trigger: CAAACTGAAGAATTTGGAGTCCAGTGTCGAAGGGCAGGAAGCATCCAGCACAGGAGAAAGATGTAGGCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543189.5
3UTR CCA 72 bp TTTCTCCTGTGCTGGATGCTTCCTGCCCTTCGACACTaGACTCCAAATTCTTCAGTTTGGGGATTCAGTCTG +
Preference number: 3 (lower is better)
Translates to: FLLCWMLPALRH*TPNSSVWGFSL
Trigger: CAGACTGAATCCCCAAACTGAAGAATTTGGAGTCCAGTGTCGAAGGGCAGGAAGCATCCAGCACAGGAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543189.5
3UTR GCA 72 bp AGTTTGGGGATTCAGTCTGGCTTTCCTTGCTCAGCTTaGAGACAGCCTATTGAGGGACCTTGTGATCATGTA +
Preference number: 3 (lower is better)
Translates to: SLGIQSGFPCSA*RQPIEGPCDHV
Trigger: TACATGATCACAAGGTCCCTCAATAGGCTGTCTGCAAGCTGAGCAAGGAAAGCCAGACTGAATCCCCAAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543189.5
3UTR-3UTR CAA 90 bp TTCTTCAGTTTGGGGATTCAGTCTGGCTTTCCTTGCTCAGCTTGCAGACAGCCTGAACAGTGGTTACCTTaGATGGAAAGGAAAAGGGAT +
Preference number: 3 (lower is better)
Translates to: FFSLGIQSGFPCSACRQPEQWLP*MERKRD
Trigger: ATCCCTTTTCCTTTCCATCAAAGGTAACCACTGTTC...AGGCTGTCTGCAAGCTGAGCAAGGAAAGCCAGACTGAATCCCCAAACTGAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543189.5
3UTR GCA 72 bp AAATTCTTCAGTTTGGGGATTCAGTCTGGCTTTCCTTaGTCAGCTTGCAGACAGCCTATTGAGGGACCTTGT +
Preference number: 3 (lower is better)
Translates to: KFFSLGIQSGFP*SACRQPIEGPC
Trigger: ACAAGGTCCCTCAATAGGCTGTCTGCAAGCTGAGCAAGGAAAGCCAGACTGAATCCCCAAACTGAAGAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543189.5
3UTR-3UTR CAA 90 bp GGAACACCTCTCTGTGAGGCAAATGGTATCTCAACAAATACCGACTTTTCAAGGATCCTACATTGCAGGTaGCAGTATCAGGTTTCCAGA +
Preference number: 3 (lower is better)
Translates to: GTPLCEANGISTNTDFSRILHCR*QYQVSR
Trigger: TCTGGAAACCTGATACTGCAACCTGCAATGTAGGAT...CCTTGAAAAGTCGGTATTTGTTGAGATACCATTTGCCTCACAGAGAGGTGTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261168.8
ENST00000536444.5
3UTR CCA 72 bp ACATGTGTTTGCATTATCCTATTCCTCCCCATTGGCTaGCTCAAGGGGATGAATGAGTTTCAGGAATTAGAC +
Preference number: 3 (lower is better)
Translates to: TCVCIILFLPIG*LKGMNEFQELD
Trigger: GTCTAATTCCTGAAACTCATTCATCCCCTTGAGCCAGCCAATGGGGAGGAATAGGATAATGCAAACACATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261168.8
ENST00000536444.5
3UTR-3UTR CAA 90 bp TGGTGGGCACAATCTAATCAGCTGTCAATGAATACAAAGCAGGCAGAAAAACATTCCAAATTCTTCAGTTaGGGGATTCAGTCTGGCTTT +
Preference number: 3 (lower is better)
Translates to: WWAQSNQLSMNTKQAEKHSKFFS*GIQSGF
Trigger: AAAGCCAGACTGAATCCCCAAACTGAAGAATTTGGA...ATGTTTTTCTGCCTGCTTTGTATTCATTGACAGCTGATTAGATTGTGCCCACCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543189.5
3UTR-3UTR CAA 90 bp TGGTGGGCACAATCTAATCAGCTGTCAATGAATACAAAGCAGGCAGAAAAACATTCTTTAAGACTCTCATaGAAGGCTATCCTTTACCAT +
Preference number: 3 (lower is better)
Translates to: WWAQSNQLSMNTKQAEKHSLRLS*KAILYH
Trigger: ATGGTAAAGGATAGCCTTCAATGAGAGTCTTAAAGA...ATGTTTTTCTGCCTGCTTTGTATTCATTGACAGCTGATTAGATTGTGCCCACCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543189.5
3UTR GCA 72 bp CCTTTAAATGCCATACAAACATCCTACATTGCAGGTTaGAGTATCAGGTTTCCAGAATTTCCAATAAGGCAA +
Preference number: 3 (lower is better)
Translates to: PLNAIQTSYIAG*SIRFPEFPIRQ
Trigger: TTGCCTTATTGGAAATTCTGGAAACCTGATACTGCAACCTGCAATGTAGGATGTTTGTATGGCATTTAAAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261168.8
ENST00000536444.5
3UTR TCA 72 bp AGGAAGGTAGAATCACACATCGGTTTTAGAGTTATTTaGTATTGCAAATACTGGGACTTGACTTTTCTGGAA +
Preference number: 3 (lower is better)
Translates to: RKVESHIGFRVI*YCKYWDLTFLE
Trigger: TTCCAGAAAAGTCAAGTCCCAGTATTTGCAATATCAAATAACTCTAAAACCGATGTGTGATTCTACCTTCCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261168.8
ENST00000536444.5
3UTR CCA 72 bp TATACAACATGTTTGAAATATGCATACACTGCAGAATaGCTAAATCTAGCTGACATATGCATGATCTCACAT +
Preference number: 3 (lower is better)
Translates to: YTTCLKYAYTAE*LNLADICMISH
Trigger: ATGTGAGATCATGCATATGTCAGCTAGATTTAGCCATTCTGCAGTGTATGCATATTTCAAACATGTTGTATA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR TCA 90 bp TCAGTTTGGGGATTCAGTCTGGCTTTCCTTGCTCAGCTTGCAGACAGCCTATTGCCTCGCAAGGGAGCCTaGGCTGGTGGTGCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: SVWGFSLAFLAQLADSLLPRKGA*AGGAGR
Trigger: TCTTCCTGCACCACCAGCTCAGGCTCCCTTGCGAGG...CAATAGGCTGTCTGCAAGCTGAGCAAGGAAAGCCAGACTGAATCCCCAAACTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR TCA 90 bp TTCTTCAGTTTGGGGATTCAGTCTGGCTTTCCTTGCTCAGCTTGCAGACAGCCTGGGTGCAGGAAGAACTaGCGTTGCTGTGAGGGAACC +
Preference number: 4 (lower is better)
Translates to: FFSLGIQSGFPCSACRQPGCRKN*RCCEGT
Trigger: GGTTCCCTCACAGCAACGTCAGTTCTTCCTGCACCC...AGGCTGTCTGCAAGCTGAGCAAGGAAAGCCAGACTGAATCCCCAAACTGAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR CCA 90 bp TCAGTTTGGGGATTCAGTCTGGCTTTCCTTGCTCAGCTTGCAGACAGCCTATTGCAGTACTCCGGAGGCTaGATCTCCGGCATCCAGATC +
Preference number: 4 (lower is better)
Translates to: SVWGFSLAFLAQLADSLLQYSGG*ISGIQI
Trigger: GATCTGGATGCCGGAGATCCAGCCTCCGGAGTACTG...CAATAGGCTGTCTGCAAGCTGAGCAAGGAAAGCCAGACTGAATCCCCAAACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR CCA 90 bp TCAGTTTGGGGATTCAGTCTGGCTTTCCTTGCTCAGCTTGCAGACAGCCTATTGTGTTGGCACCCCAGATaGTTGAAGAGGCGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: SVWGFSLAFLAQLADSLLCWHPR*LKRRCW
Trigger: CCAGCACCGCCTCTTCAACCATCTGGGGTGCCAACA...CAATAGGCTGTCTGCAAGCTGAGCAAGGAAAGCCAGACTGAATCCCCAAACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR GCA 90 bp GTTTGGGGATTCAGTCTGGCTTTCCTTGCTCAGCTTGCAGACAGCCTATTGAGGAACCACCTGGTGGTTTaGAGGAGCTCTTGGTACAGG +
Preference number: 4 (lower is better)
Translates to: VWGFSLAFLAQLADSLLRNHLVV*RSSWYR
Trigger: CCTGTACCAAGAGCTCCTGCAAACCACCAGGTGGTT...CCTCAATAGGCTGTCTGCAAGCTGAGCAAGGAAAGCCAGACTGAATCCCCAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR CCA 90 bp TCAGTTTGGGGATTCAGTCTGGCTTTCCTTGCTCAGCTTGCAGACAGCCTATTGCAAGGGAGCCTGAGCTaGTGGTGCAGGAAGAGTTGT +
Preference number: 4 (lower is better)
Translates to: SVWGFSLAFLAQLADSLLQGSLS*WCRKSC
Trigger: ACAACTCTTCCTGCACCACCAGCTCAGGCTCCCTTG...CAATAGGCTGTCTGCAAGCTGAGCAAGGAAAGCCAGACTGAATCCCCAAACTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR TCA 90 bp GTTTGGGGATTCAGTCTGGCTTTCCTTGCTCAGCTTGCAGACAGCCTATTGAGGGCAGTAGGGTTCCTTTaGATACTAGGACTGGGCACA +
Preference number: 4 (lower is better)
Translates to: VWGFSLAFLAQLADSLLRAVGFL*ILGLGT
Trigger: TGTGCCCAGTCCTAGTATTCAAAGGAACCCTACTGC...CCTCAATAGGCTGTCTGCAAGCTGAGCAAGGAAAGCCAGACTGAATCCCCAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR GCA 90 bp TTCTTCAGTTTGGGGATTCAGTCTGGCTTTCCTTGCTCAGCTTGCAGACAGCCTGCTGGTTGTATGGGTTaGAATGGTCGTGACACAGGC +
Preference number: 4 (lower is better)
Translates to: FFSLGIQSGFPCSACRQPAGCMG*NGRDTG
Trigger: GCCTGTGTCACGACCATTGCAACCCATACAACCAGC...AGGCTGTCTGCAAGCTGAGCAAGGAAAGCCAGACTGAATCCCCAAACTGAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR GCA 90 bp GTTTGGGGATTCAGTCTGGCTTTCCTTGCTCAGCTTGCAGACAGCCTATTGAGGTGGTTGAAGAGGCGGTaGTGGTTGTATGGGTTGCAA +
Preference number: 4 (lower is better)
Translates to: VWGFSLAFLAQLADSLLRWLKRR*WLYGLQ
Trigger: TTGCAACCCATACAACCAGCACCGCCTCTTCAACCA...CCTCAATAGGCTGTCTGCAAGCTGAGCAAGGAAAGCCAGACTGAATCCCCAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR CCA 90 bp TTCTTCAGTTTGGGGATTCAGTCTGGCTTTCCTTGCTCAGCTTGCAGACAGCCTCAGATCACCAGGGGCTaGATCACCAGAAACTGGTTC +
Preference number: 4 (lower is better)
Translates to: FFSLGIQSGFPCSACRQPQITRG*ITRNWF
Trigger: GAACCAGTTTCTGGTGATCCAGCCCCTGGTGATCTG...AGGCTGTCTGCAAGCTGAGCAAGGAAAGCCAGACTGAATCCCCAAACTGAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR CCA 90 bp TTCTTCAGTTTGGGGATTCAGTCTGGCTTTCCTTGCTCAGCTTGCAGACAGCCTCAGATCATCAGAGGCTaGATCAGTGGAAGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: FFSLGIQSGFPCSACRQPQIIRG*ISGSWC
Trigger: GCACCAGCTTCCACTGATCCAGCCTCTGATGATCTG...AGGCTGTCTGCAAGCTGAGCAAGGAAAGCCAGACTGAATCCCCAAACTGAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR CCA 90 bp TCTTCAGTTTGGGGATTCAGTCTGGCTTTCCTTGCTCAGCTTGCAGACAGCCTAGCGGTGCTGGTTGTATaGGTTGCAATGGTCGTGACA +
Preference number: 4 (lower is better)
Translates to: SSVWGFSLAFLAQLADSLAVLVV*VAMVVT
Trigger: TGTCACGACCATTGCAACCCATACAACCAGCACCGC...TAGGCTGTCTGCAAGCTGAGCAAGGAAAGCCAGACTGAATCCCCAAACTGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR CCA 90 bp GTTTGGGGATTCAGTCTGGCTTTCCTTGCTCAGCTTGCAGACAGCCTATTGAGGTTGAAGAGGCGGTGCTaGTTGTATGGGTTGCAATGG +
Preference number: 4 (lower is better)
Translates to: VWGFSLAFLAQLADSLLRLKRRC*LYGLQW
Trigger: CCATTGCAACCCATACAACCAGCACCGCCTCTTCAA...CCTCAATAGGCTGTCTGCAAGCTGAGCAAGGAAAGCCAGACTGAATCCCCAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR CCA 90 bp TCAGTTTGGGGATTCAGTCTGGCTTTCCTTGCTCAGCTTGCAGACAGCCTATTGTATGGTGGTCTGAGATaGTCCACTTGTTGGCACCCC +
Preference number: 4 (lower is better)
Translates to: SVWGFSLAFLAQLADSLLYGGLR*STCWHP
Trigger: GGGGTGCCAACAAGTGGACCATCTCAGACCACCATA...CAATAGGCTGTCTGCAAGCTGAGCAAGGAAAGCCAGACTGAATCCCCAAACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR CCA 90 bp GTTTGGGGATTCAGTCTGGCTTTCCTTGCTCAGCTTGCAGACAGCCTATTGAGGGTTTGCAGGAGCTCTTaGTACAGGGAGTCTTGTGGT +
Preference number: 4 (lower is better)
Translates to: VWGFSLAFLAQLADSLLRVCRSS*YRESCG
Trigger: ACCACAAGACTCCCTGTACCAAGAGCTCCTGCAAAC...CCTCAATAGGCTGTCTGCAAGCTGAGCAAGGAAAGCCAGACTGAATCCCCAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR CCA 90 bp GTTTGGGGATTCAGTCTGGCTTTCCTTGCTCAGCTTGCAGACAGCCTATTGAGGAAAGCAGGCAGAAAATaGGCTGGAGAAGGCAGATCC +
Preference number: 4 (lower is better)
Translates to: VWGFSLAFLAQLADSLLRKAGRK*AGEGRS
Trigger: GGATCTGCCTTCTCCAGCCCATTTTCTGCCTGCTTT...CCTCAATAGGCTGTCTGCAAGCTGAGCAAGGAAAGCCAGACTGAATCCCCAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543189.5
3UTR CAA 72 bp TCCTGCCCTTCGACACTGGACTCCAAATTCTTCAGTTaGGGGATTCAGTCTGGCTTTCCTTGCTCAGCTTGC +
Preference number: 4 (lower is better)
Translates to: SCPSTLDSKFFS*GIQSGFPCSAC
Trigger: GCAAGCTGAGCAAGGAAAGCCAGACTGAATCCCCAAACTGAAGAATTTGGAGTCCAGTGTCGAAGGGCAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR TCA 90 bp GTTTGGGGATTCAGTCTGGCTTTCCTTGCTCAGCTTGCAGACAGCCTATTGAGGCATGTTTTCCAAAGGTaGGGTTGGGTCCAAATCTCC +
Preference number: 4 (lower is better)
Translates to: VWGFSLAFLAQLADSLLRHVFQR*GWVQIS
Trigger: GGAGATTTGGACCCAACCTCACCTTTGGAAAACATG...CCTCAATAGGCTGTCTGCAAGCTGAGCAAGGAAAGCCAGACTGAATCCCCAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR TCA 90 bp TTCTTCAGTTTGGGGATTCAGTCTGGCTTTCCTTGCTCAGCTTGCAGACAGCCTTACAGTTTTTCCTGGTaGTACTGGTGGGTTGGGTGG +
Preference number: 4 (lower is better)
Translates to: FFSLGIQSGFPCSACRQPYSFSW*YWWVGW
Trigger: CCACCCAACCCACCAGTATCACCAGGAAAAACTGTA...AGGCTGTCTGCAAGCTGAGCAAGGAAAGCCAGACTGAATCCCCAAACTGAAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR TCA 90 bp TGCCCTTCGACACTGGACTCCAAATTCTTCAGTTTGGGGATTCAGTCTGGCTTTGGGTTGCAATGGTCGTaGCACAGGCTGAGAAGAACT +
Preference number: 4 (lower is better)
Translates to: CPSTLDSKFFSLGIQSGFGLQWS*HRLRRT
Trigger: AGTTCTTCTCAGCCTGTGTCACGACCATTGCAACCC...AAAGCCAGACTGAATCCCCAAACTGAAGAATTTGGAGTCCAGTGTCGAAGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR TCA 90 bp GTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTACCTCGCAAGGGAGCCTaGGCTGGTGGTGCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: VYTHLSKKSCTRWILHGVPRKGA*AGGAGR
Trigger: TCTTCCTGCACCACCAGCTCAGGCTCCCTTGCGAGG...TACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR TCA 90 bp TTCTTCAGTTTGGGGATTCAGTCTGGCTTTCCTTGCTCAGCTTGCAGACAGCCTTACTATTTTGGGGATTaGCCTGCCGAACAGCAGGAG +
Preference number: 4 (lower is better)
Translates to: FFSLGIQSGFPCSACRQPYYFGD*PAEQQE
Trigger: CTCCTGCTGTTCGGCAGGTCAATCCCCAAAATAGTA...AGGCTGTCTGCAAGCTGAGCAAGGAAAGCCAGACTGAATCCCCAAACTGAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR GCA 90 bp TCTTCAGTTTGGGGATTCAGTCTGGCTTTCCTTGCTCAGCTTGCAGACAGCCTATGTTGTTCCCAATGGTaGAGCACTGGCAGTAGGGTT +
Preference number: 4 (lower is better)
Translates to: SSVWGFSLAFLAQLADSLCCSQW*STGSRV
Trigger: AACCCTACTGCCAGTGCTGCACCATTGGGAACAACA...TAGGCTGTCTGCAAGCTGAGCAAGGAAAGCCAGACTGAATCCCCAAACTGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR GCA 90 bp GTTTGGGGATTCAGTCTGGCTTTCCTTGCTCAGCTTGCAGACAGCCTATTGAGGAGCCTGAGCTGGTGGTaGAGGAAGAGTTGTATAAAC +
Preference number: 4 (lower is better)
Translates to: VWGFSLAFLAQLADSLLRSLSWW*RKSCIN
Trigger: GTTTATACAACTCTTCCTGCACCACCAGCTCAGGCT...CCTCAATAGGCTGTCTGCAAGCTGAGCAAGGAAAGCCAGACTGAATCCCCAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR GCA 90 bp TGCCCTTCGACACTGGACTCCAAATTCTTCAGTTTGGGGATTCAGTCTGGCTTTCAGTCTGGCTTTCCTTaGTCAGCTTGCAGACAGCCT +
Preference number: 4 (lower is better)
Translates to: CPSTLDSKFFSLGIQSGFQSGFP*SACRQP
Trigger: AGGCTGTCTGCAAGCTGAGCAAGGAAAGCCAGACTG...AAAGCCAGACTGAATCCCCAAACTGAAGAATTTGGAGTCCAGTGTCGAAGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR CCA 90 bp GTTTGGGGATTCAGTCTGGCTTTCCTTGCTCAGCTTGCAGACAGCCTATTGAGGAGGAGTTTGAAAGGATaGTGGTGCACTCTCGCTTAC +
Preference number: 4 (lower is better)
Translates to: VWGFSLAFLAQLADSLLRRSLKG*WCTLAY
Trigger: GTAAGCGAGAGTGCACCACCATCCTTTCAAACTCCT...CCTCAATAGGCTGTCTGCAAGCTGAGCAAGGAAAGCCAGACTGAATCCCCAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR CCA 90 bp TCAGTTTGGGGATTCAGTCTGGCTTTCCTTGCTCAGCTTGCAGACAGCCTATTGAAGTGTTGTTCCCAATaGTGCAGCACTGGCAGTAGG +
Preference number: 4 (lower is better)
Translates to: SVWGFSLAFLAQLADSLLKCCSQ*CSTGSR
Trigger: CCTACTGCCAGTGCTGCACCATTGGGAACAACACTT...CAATAGGCTGTCTGCAAGCTGAGCAAGGAAAGCCAGACTGAATCCCCAAACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR CCA 90 bp TTCTTCAGTTTGGGGATTCAGTCTGGCTTTCCTTGCTCAGCTTGCAGACAGCCTAGATGGTCCACTTGTTaGCACCCCAGATGGTTGAAG +
Preference number: 4 (lower is better)
Translates to: FFSLGIQSGFPCSACRQPRWSTC*HPRWLK
Trigger: CTTCAACCATCTGGGGTGCCAACAAGTGGACCATCT...AGGCTGTCTGCAAGCTGAGCAAGGAAAGCCAGACTGAATCCCCAAACTGAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR CCA 90 bp TCAGTTTGGGGATTCAGTCTGGCTTTCCTTGCTCAGCTTGCAGACAGCCTATTGGTACAGGGAGTCTTGTaGTCACCTGAGTTACTGGAC +
Preference number: 4 (lower is better)
Translates to: SVWGFSLAFLAQLADSLLVQGVL*SPELLD
Trigger: GTCCAGTAACTCAGGTGACCACAAGACTCCCTGTAC...CAATAGGCTGTCTGCAAGCTGAGCAAGGAAAGCCAGACTGAATCCCCAAACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR CCA 90 bp TGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTTGGGTGCACGGGGCGTaGGGGCTCAGTATGCACTTG +
Preference number: 4 (lower is better)
Translates to: CIHTSVQEILHKVDFTWGWVHGA*GLSMHL
Trigger: CAAGTGCATACTGAGCCCCCACGCCCCGTGCACCCA...ACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR TCA 90 bp TTCTTCAGTTTGGGGATTCAGTCTGGCTTTCCTTGCTCAGCTTGCAGACAGCCTCTAAACTGTCCATTCTaGATCTTTTGGGGCGGAAGC +
Preference number: 4 (lower is better)
Translates to: FFSLGIQSGFPCSACRQPLNCPF*IFWGGS
Trigger: GCTTCCGCCCCAAAAGATTCAGAATGGACAGTTTAG...AGGCTGTCTGCAAGCTGAGCAAGGAAAGCCAGACTGAATCCCCAAACTGAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR TCA 90 bp TCTTCAGTTTGGGGATTCAGTCTGGCTTTCCTTGCTCAGCTTGCAGACAGCCTAACTGCTTCAAGTTGCTaGCGATCACTCACTCTCATC +
Preference number: 4 (lower is better)
Translates to: SSVWGFSLAFLAQLADSLTASSC*RSLTLI
Trigger: GATGAGAGTGAGTGATCGTCAGCAACTTGAAGCAGT...TAGGCTGTCTGCAAGCTGAGCAAGGAAAGCCAGACTGAATCCCCAAACTGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR TCA 90 bp TCTTCAGTTTGGGGATTCAGTCTGGCTTTCCTTGCTCAGCTTGCAGACAGCCTAGTATTCACAGGAGTTTaGAAGGATGGTGGTGCACTC +
Preference number: 4 (lower is better)
Translates to: SSVWGFSLAFLAQLADSLVFTGV*KDGGAL
Trigger: GAGTGCACCACCATCCTTTCAAACTCCTGTGAATAC...TAGGCTGTCTGCAAGCTGAGCAAGGAAAGCCAGACTGAATCCCCAAACTGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR TCA 90 bp GTTTGGGGATTCAGTCTGGCTTTCCTTGCTCAGCTTGCAGACAGCCTATTGAGGTTTCCACTAGGCACCTaGGTAGTAGCAACTACAGTA +
Preference number: 4 (lower is better)
Translates to: VWGFSLAFLAQLADSLLRFPLGT*VVATTV
Trigger: TACTGTAGTTGCTACTACTCAGGTGCCTAGTGGAAA...CCTCAATAGGCTGTCTGCAAGCTGAGCAAGGAAAGCCAGACTGAATCCCCAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR TCA 90 bp AGTGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGGCACCCCAGATGGTTaGAGAGGCGGTGCTGGTTGT +
Preference number: 4 (lower is better)
Translates to: SVYTHLSKKSCTRWILHGGTPDG*RGGAGC
Trigger: ACAACCAGCACCGCCTCTTCAACCATCTGGGGTGCC...CCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR TCA 90 bp TTCTTCAGTTTGGGGATTCAGTCTGGCTTTCCTTGCTCAGCTTGCAGACAGCCTAGTCTTGTGGTCACCTaGGTTACTGGACGATGTGTT +
Preference number: 4 (lower is better)
Translates to: FFSLGIQSGFPCSACRQPSLVVT*VTGRCV
Trigger: AACACATCGTCCAGTAACTCAGGTGACCACAAGACT...AGGCTGTCTGCAAGCTGAGCAAGGAAAGCCAGACTGAATCCCCAAACTGAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR TCA 90 bp GAAACTAAAAAGGTAACCGTGGAGTGGAAACTGCTACTAGAAAGTCTGTTATCACCTCGCAAGGGAGCCTaGGCTGGTGGTGCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: ETKKVTVEWKLLLESLLSPRKGA*AGGAGR
Trigger: TCTTCCTGCACCACCAGCTCAGGCTCCCTTGCGAGG...TGATAACAGACTTTCTAGTAGCAGTTTCCACTCCACGGTTACCTTTTTAGTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536444.5
CDS-3UTR GCA 90 bp TCAGTTTGGGGATTCAGTCTGGCTTTCCTTGCTCAGCTTGCAGACAGCCTATTGTTCTTGGGGTGGTATTaGTGTTCTGTTCTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: SVWGFSLAFLAQLADSLLFLGWY*CSVLQQ
Trigger: CTGCTGCAGAACAGAACAGCAATACCACCCCAAGAA...CAATAGGCTGTCTGCAAGCTGAGCAAGGAAAGCCAGACTGAATCCCCAAACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR CCA 90 bp TTCTTCAGTTTGGGGATTCAGTCTGGCTTTCCTTGCTCAGCTTGCAGACAGCCTCACAATCACCAGAAATaGGTTCAACAGGGACCGGTT +
Preference number: 4 (lower is better)
Translates to: FFSLGIQSGFPCSACRQPHNHQK*VQQGPV
Trigger: AACCGGTCCCTGTTGAACCCATTTCTGGTGATTGTG...AGGCTGTCTGCAAGCTGAGCAAGGAAAGCCAGACTGAATCCCCAAACTGAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR CCA 90 bp GGAACACCTCTCTGTGAGGCAAATGGTATCTCAACAAATACCGACTTTTCAAGGCAGAGGCTGGATCAGTaGAAGCTGGTGCTCCAGAAG +
Preference number: 4 (lower is better)
Translates to: GTPLCEANGISTNTDFSRQRLDQ*KLVLQK
Trigger: CTTCTGGAGCACCAGCTTCCACTGATCCAGCCTCTG...CCTTGAAAAGTCGGTATTTGTTGAGATACCATTTGCCTCACAGAGAGGTGTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536444.5
CDS-3UTR CCA 90 bp TCAGTTTGGGGATTCAGTCTGGCTTTCCTTGCTCAGCTTGCAGACAGCCTATTGAAAGAGATTGTAGGCTaGGGATTTCCACTAGGCACC +
Preference number: 4 (lower is better)
Translates to: SVWGFSLAFLAQLADSLLKEIVG*GFPLGT
Trigger: GGTGCCTAGTGGAAATCCCCAGCCTACAATCTCTTT...CAATAGGCTGTCTGCAAGCTGAGCAAGGAAAGCCAGACTGAATCCCCAAACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR CCA 90 bp GTTTGGGGATTCAGTCTGGCTTTCCTTGCTCAGCTTGCAGACAGCCTATTGAGGACCACTCACTGTAGGTaGGCTTTGCACAGAAATGAA +
Preference number: 4 (lower is better)
Translates to: VWGFSLAFLAQLADSLLRTTHCR*ALHRNE
Trigger: TTCATTTCTGTGCAAAGCCCACCTACAGTGAGTGGT...CCTCAATAGGCTGTCTGCAAGCTGAGCAAGGAAAGCCAGACTGAATCCCCAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR CCA 90 bp TATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATTGGGTGCACGGGGCGTaGGGGCTCAGTATGCACTTG +
Preference number: 4 (lower is better)
Translates to: YTHICPRNLAQGGFYMGYWVHGA*GLSMHL
Trigger: CAAGTGCATACTGAGCCCCCACGCCCCGTGCACCCA...ATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp GAAACTAAAAAGGTAACCGTGGAGTGGAAACTGCTACTAGAAAGTCTGTTATCAGTAATCGCAGCACTCTaGGAGGCCGAGGCGGGTGGA +
Preference number: 4 (lower is better)
Translates to: ETKKVTVEWKLLLESLLSVIAAL*EAEAGG
Trigger: TCCACCCGCCTCGGCCTCCCAGAGTGCTGCGATTAC...TGATAACAGACTTTCTAGTAGCAGTTTCCACTCCACGGTTACCTTTTTAGTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536444.5
CDS-3UTR CCA 90 bp TCAGTTTGGGGATTCAGTCTGGCTTTCCTTGCTCAGCTTGCAGACAGCCTATTGCCTGCCCTTCGACACTaGACTCCAAATTCTTCAGTT +
Preference number: 4 (lower is better)
Translates to: SVWGFSLAFLAQLADSLLPALRH*TPNSSV
Trigger: AACTGAAGAATTTGGAGTCCAGTGTCGAAGGGCAGG...CAATAGGCTGTCTGCAAGCTGAGCAAGGAAAGCCAGACTGAATCCCCAAACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR CCA 90 bp GTTTGGGGATTCAGTCTGGCTTTCCTTGCTCAGCTTGCAGACAGCCTATTGAGGCCACCTTTAATCTGGTaGGCACAATCTAATCAGCTG +
Preference number: 4 (lower is better)
Translates to: VWGFSLAFLAQLADSLLRPPLIW*AQSNQL
Trigger: CAGCTGATTAGATTGTGCCCACCAGATTAAAGGTGG...CCTCAATAGGCTGTCTGCAAGCTGAGCAAGGAAAGCCAGACTGAATCCCCAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR TCA 90 bp TCAGTTTGGGGATTCAGTCTGGCTTTCCTTGCTCAGCTTGCAGACAGCCTATTGCAACTGCTGGAGGAGTaGCAAGATTGGTTGAAGATA +
Preference number: 4 (lower is better)
Translates to: SVWGFSLAFLAQLADSLLQLLEE*QDWLKI
Trigger: TATCTTCAACCAATCTTGTCACTCCTCCAGCAGTTG...CAATAGGCTGTCTGCAAGCTGAGCAAGGAAAGCCAGACTGAATCCCCAAACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR TCA 90 bp CTTCAAAACCCTAATAAAAATAGGGCCACTTGCTGGAGCCCAGTTTGTATTAGAGGGTGCAGGAAGAACTaGCGTTGCTGTGAGGGAACC +
Preference number: 4 (lower is better)
Translates to: LQNPNKNRATCWSPVCIRGCRKN*RCCEGT
Trigger: GGTTCCCTCACAGCAACGTCAGTTCTTCCTGCACCC...TCTAATACAAACTGGGCTCCAGCAAGTGGCCCTATTTTTATTAGGGTTTTGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536444.5
CDS-3UTR TCA 90 bp GTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATTGGGTGCAGGAAGAACTaGCGTTGCTGTGAGGGAACC +
Preference number: 4 (lower is better)
Translates to: VQEILHKVDFTWGIMHKIGCRKN*RCCEGT
Trigger: GGTTCCCTCACAGCAACGTCAGTTCTTCCTGCACCC...AATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR TCA 90 bp TGCCCTTCGACACTGGACTCCAAATTCTTCAGTTTGGGGATTCAGTCTGGCTTTGGCTTTTCCACACTGTaGTGTGCTATCAGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: CPSTLDSKFFSLGIQSGFGFSTL*CAISCF
Trigger: AAAGCAGCTGATAGCACATCACAGTGTGGAAAAGCC...AAAGCCAGACTGAATCCCCAAACTGAAGAATTTGGAGTCCAGTGTCGAAGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR TCA 90 bp TCAGTTTGGGGATTCAGTCTGGCTTTCCTTGCTCAGCTTGCAGACAGCCTATTGATCAATGACACCACTTaGATCACTGCCAGTGGCTTT +
Preference number: 4 (lower is better)
Translates to: SVWGFSLAFLAQLADSLLINDTT*ITASGF
Trigger: AAAGCCACTGGCAGTGATTCAAGTGGTGTCATTGAT...CAATAGGCTGTCTGCAAGCTGAGCAAGGAAAGCCAGACTGAATCCCCAAACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR TCA 90 bp TACACTGCAGAATGGCTAAATCTAGCTGACATATGCATGATCTCACATACTTACGGCACCCCAGATGGTTaGAGAGGCGGTGCTGGTTGT +
Preference number: 4 (lower is better)
Translates to: YTAEWLNLADICMISHTYGTPDG*RGGAGC
Trigger: ACAACCAGCACCGCCTCTTCAACCATCTGGGGTGCC...GTAAGTATGTGAGATCATGCATATGTCAGCTAGATTTAGCCATTCTGCAGTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR TCA 90 bp AACAAATGTAGTGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTCCTCGCAAGGGAGCCTaGGCTGGTGGTGCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: NKCSVYTHLSKKSCTRWIPRKGA*AGGAGR
Trigger: TCTTCCTGCACCACCAGCTCAGGCTCCCTTGCGAGG...AATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACACTACATTTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR TCA 90 bp GTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATTTCCAGCCTTGCCTCCTaGGTAGCTGGGATTACAGGC +
Preference number: 4 (lower is better)
Translates to: VQEILHKVDFTWGIMHKISSLAS*VAGITG
Trigger: GCCTGTAATCCCAGCTACTCAGGAGGCAAGGCTGGA...AATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536444.5
CDS-3UTR GCA 90 bp TTCTTCAGTTTGGGGATTCAGTCTGGCTTTCCTTGCTCAGCTTGCAGACAGCCTGCATCTGTCTCACTGTaGCTGCATTTCTGTAAGACA +
Preference number: 4 (lower is better)
Translates to: FFSLGIQSGFPCSACRQPASVSL*LHFCKT
Trigger: TGTCTTACAGAAATGCAGGCACAGTGAGACAGATGC...AGGCTGTCTGCAAGCTGAGCAAGGAAAGCCAGACTGAATCCCCAAACTGAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR GCA 90 bp TGCCCTTCGACACTGGACTCCAAATTCTTCAGTTTGGGGATTCAGTCTGGCTTTCACCACTTGAATCACTaGCAGTGGCTTTTCCACACT +
Preference number: 4 (lower is better)
Translates to: CPSTLDSKFFSLGIQSGFHHLNH*QWLFHT
Trigger: AGTGTGGAAAAGCCACTGGCAGTGATTCAAGTGGTG...AAAGCCAGACTGAATCCCCAAACTGAAGAATTTGGAGTCCAGTGTCGAAGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR GCA 90 bp TGCCCTTCGACACTGGACTCCAAATTCTTCAGTTTGGGGATTCAGTCTGGCTTTTTTCCTTGCTCAGCTTaGAGACAGCCTATTGAGGGA +
Preference number: 4 (lower is better)
Translates to: CPSTLDSKFFSLGIQSGFFPCSA*RQPIEG
Trigger: TCCCTCAATAGGCTGTCTGCAAGCTGAGCAAGGAAA...AAAGCCAGACTGAATCCCCAAACTGAAGAATTTGGAGTCCAGTGTCGAAGGGCA
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR CCA 90 bp TCTTCAGTTTGGGGATTCAGTCTGGCTTTCCTTGCTCAGCTTGCAGACAGCCTATGGATCACCAGAAACTaGTTCAGCAGGCAGTTTAGA +
Preference number: 4 (lower is better)
Translates to: SSVWGFSLAFLAQLADSLWITRN*FSRQFR
Trigger: TCTAAACTGCCTGCTGAACCAGTTTCTGGTGATCCA...TAGGCTGTCTGCAAGCTGAGCAAGGAAAGCCAGACTGAATCCCCAAACTGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR CCA 90 bp ACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAGGGACCGGTTCACCTaGGATGGGATCACTAGAGGT +
Preference number: 4 (lower is better)
Translates to: TSVQEILHKVDFTWGIMHRDRFT*DGITRG
Trigger: ACCTCTAGTGATCCCATCCCAGGTGAACCGGTCCCT...GTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp TCTTCAGTTTGGGGATTCAGTCTGGCTTTCCTTGCTCAGCTTGCAGACAGCCTAAGCGTTTGGTTAACCTaGCTATCTTGGCCTGTAGTT +
Preference number: 4 (lower is better)
Translates to: SSVWGFSLAFLAQLADSLSVWLT*LSWPVV
Trigger: AACTACAGGCCAAGATAGCCAGGTTAACCAAACGCT...TAGGCTGTCTGCAAGCTGAGCAAGGAAAGCCAGACTGAATCCCCAAACTGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR CCA 90 bp TTCTTCAGTTTGGGGATTCAGTCTGGCTTTCCTTGCTCAGCTTGCAGACAGCCTCTGCTTCAAAGCGTTTaGTTAACCTGGCTATCTTGG +
Preference number: 4 (lower is better)
Translates to: FFSLGIQSGFPCSACRQPLLQSV*LTWLSW
Trigger: CCAAGATAGCCAGGTTAACCAAACGCTTTGAAGCAG...AGGCTGTCTGCAAGCTGAGCAAGGAAAGCCAGACTGAATCCCCAAACTGAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR CCA 90 bp GTTTGGGGATTCAGTCTGGCTTTCCTTGCTCAGCTTGCAGACAGCCTATTGAGGTACTGGTGGGTTGGGTaGATGTTCATGTCTTTTCTT +
Preference number: 4 (lower is better)
Translates to: VWGFSLAFLAQLADSLLRYWWVG*MFMSFL
Trigger: AAGAAAAGACATGAACATCCACCCAACCCACCAGTA...CCTCAATAGGCTGTCTGCAAGCTGAGCAAGGAAAGCCAGACTGAATCCCCAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR CCA 90 bp TCTTCAGTTTGGGGATTCAGTCTGGCTTTCCTTGCTCAGCTTGCAGACAGCCTAACTACTGACAACTGCTaGAGGAGTGACAAGATTGGT +
Preference number: 4 (lower is better)
Translates to: SSVWGFSLAFLAQLADSLTTDNC*RSDKIG
Trigger: ACCAATCTTGTCACTCCTCCAGCAGTTGTCAGTAGT...TAGGCTGTCTGCAAGCTGAGCAAGGAAAGCCAGACTGAATCCCCAAACTGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR CCA 90 bp GTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATTTGTTGGCACCCCAGATaGTTGAAGAGGCGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: VQEILHKVDFTWGIMHKICWHPR*LKRRCW
Trigger: CCAGCACCGCCTCTTCAACCATCTGGGGTGCCAACA...AATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp TCTTCAGTTTGGGGATTCAGTCTGGCTTTCCTTGCTCAGCTTGCAGACAGCCTAGTAGTAAGTGTATGGTaGTCTGAGATGGTCCACTTG +
Preference number: 4 (lower is better)
Translates to: SSVWGFSLAFLAQLADSLVVSVW*SEMVHL
Trigger: CAAGTGGACCATCTCAGACCACCATACACTTACTAC...TAGGCTGTCTGCAAGCTGAGCAAGGAAAGCCAGACTGAATCCCCAAACTGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR CCA 90 bp TCAGTTTGGGGATTCAGTCTGGCTTTCCTTGCTCAGCTTGCAGACAGCCTATTGGGTCACCTGAGTTACTaGACGATGTGTTACATTCAC +
Preference number: 4 (lower is better)
Translates to: SVWGFSLAFLAQLADSLLGHLSY*TMCYIH
Trigger: GTGAATGTAACACATCGTCCAGTAACTCAGGTGACC...CAATAGGCTGTCTGCAAGCTGAGCAAGGAAAGCCAGACTGAATCCCCAAACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR CCA 90 bp ACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACCAATGGGGATGGGAGTaGGGAACACCTCTCTGTGAG +
Preference number: 4 (lower is better)
Translates to: TSVQEILHKVDFTWGIMHQWGWE*GTPLCE
Trigger: CTCACAGAGAGGTGTTCCCCACTCCCATCCCCATTG...GTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000536444.5
CDS-3UTR TCA 90 bp TGCCCTTCGACACTGGACTCCAAATTCTTCAGTTTGGGGATTCAGTCTGGCTTTTGGCCTGTAGTTCAGTaGGAACTGTTTTATGCCTCT +
Preference number: 4 (lower is better)
Translates to: CPSTLDSKFFSLGIQSGFWPVVQ*ELFYAS
Trigger: AGAGGCATAAAACAGTTCTCACTGAACTACAGGCCA...AAAGCCAGACTGAATCCCCAAACTGAAGAATTTGGAGTCCAGTGTCGAAGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR TCA 90 bp TGGTGGGCACAATCTAATCAGCTGTCAATGAATACAAAGCAGGCAGAAAAACATGAACTGACGTTGCTGTaGGGGAACCCGAAGTCACTG +
Preference number: 4 (lower is better)
Translates to: WWAQSNQLSMNTKQAEKHELTLL*GNPKSL
Trigger: CAGTGACTTCGGGTTCCCTCACAGCAACGTCAGTTC...ATGTTTTTCTGCCTGCTTTGTATTCATTGACAGCTGATTAGATTGTGCCCACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR TCA 90 bp AGTGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGAACTGACGTTGCTGTaGGGGAACCCGAAGTCACTG +
Preference number: 4 (lower is better)
Translates to: SVYTHLSKKSCTRWILHGELTLL*GNPKSL
Trigger: CAGTGACTTCGGGTTCCCTCACAGCAACGTCAGTTC...CCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR TCA 90 bp GTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATGGCTCTGTAGAAGCTaGGGCTGGGAGGATACTGCA +
Preference number: 4 (lower is better)
Translates to: VYTHLSKKSCTRWILHGVWLCRS*GWEDTA
Trigger: TGCAGTATCCTCCCAGCCTCAGCTTCTACAGAGCCA...TACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR TCA 90 bp TGGTGGGCACAATCTAATCAGCTGTCAATGAATACAAAGCAGGCAGAAAAACATTGGCTCTGTAGAAGCTaGGGCTGGGAGGATACTGCA +
Preference number: 4 (lower is better)
Translates to: WWAQSNQLSMNTKQAEKHWLCRS*GWEDTA
Trigger: TGCAGTATCCTCCCAGCCTCAGCTTCTACAGAGCCA...ATGTTTTTCTGCCTGCTTTGTATTCATTGACAGCTGATTAGATTGTGCCCACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR TCA 90 bp TGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATTGGCTCTGTAGAAGCTaGGGCTGGGAGGATACTGCA +
Preference number: 4 (lower is better)
Translates to: CPRNLAQGGFYMGYHAQDWLCRS*GWEDTA
Trigger: TGCAGTATCCTCCCAGCCTCAGCTTCTACAGAGCCA...ATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR TCA 90 bp GTTTGGGGATTCAGTCTGGCTTTCCTTGCTCAGCTTGCAGACAGCCTATTGAGGCAGCTGCTTTCTTACTaGCAGAAGCATCTATTGTTT +
Preference number: 4 (lower is better)
Translates to: VWGFSLAFLAQLADSLLRQLLSY*QKHLLF
Trigger: AAACAATAGATGCTTCTGTCAGTAAGAAAGCAGCTG...CCTCAATAGGCTGTCTGCAAGCTGAGCAAGGAAAGCCAGACTGAATCCCCAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR TCA 90 bp CAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATTAAAGGCACCCCAGATGGTTaGAGAGGCGGTGCTGGTTGT +
Preference number: 4 (lower is better)
Translates to: QEILHKVDFTWGIMHKIKGTPDG*RGGAGC
Trigger: ACAACCAGCACCGCCTCTTCAACCATCTGGGGTGCC...TTTAATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR TCA 90 bp ACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACCACTATTTTGGGGATTaGCCTGCCGAACAGCAGGAG +
Preference number: 4 (lower is better)
Translates to: TSVQEILHKVDFTWGIMHHYFGD*PAEQQE
Trigger: CTCCTGCTGTTCGGCAGGTCAATCCCCAAAATAGTG...GTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR TCA 90 bp AGTGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTCGGTGATGCACTGTaGGCTGAGGTCCTGTTGATC +
Preference number: 4 (lower is better)
Translates to: SVYTHLSKKSCTRWILHGVGDAL*AEVLLI
Trigger: GATCAACAGGACCTCAGCTCACAGTGCATCACCGAC...CCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR TCA 90 bp CACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCATTCAAGTGTGGCTTCTaGGGCAGAGATGTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: HICPRNLAQGGFYMGYHAFKCGF*GRDVLA
Trigger: TGCCAGCACATCTCTGCCTCAGAAGCCACACTTGAA...TGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR TCA 90 bp ACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACCATGCCCGGCTAAGATaGGACTATGCATGCACCTGT +
Preference number: 4 (lower is better)
Translates to: TSVQEILHKVDFTWGIMHHARLR*DYACTC
Trigger: ACAGGTGCATGCATAGTCTCATCTTAGCCGGGCATG...GTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536444.5
CDS-3UTR GCA 90 bp TGCCCTTCGACACTGGACTCCAAATTCTTCAGTTTGGGGATTCAGTCTGGCTTTTTGTACAATAGAGTGTaGTGTTGGAACAGCCTGCAC +
Preference number: 4 (lower is better)
Translates to: CPSTLDSKFFSLGIQSGFLYNRV*CWNSLH
Trigger: GTGCAGGCTGTTCCAACAGCACACTCTATTGTACAA...AAAGCCAGACTGAATCCCCAAACTGAAGAATTTGGAGTCCAGTGTCGAAGGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR GCA 90 bp CATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAGCTGGTTGTATGGGTTaGAATGGTCGTGACACAGGC +
Preference number: 4 (lower is better)
Translates to: HLSKKSCTRWILHGVSCTAGCMG*NGRDTG
Trigger: GCCTGTGTCACGACCATTGCAACCCATACAACCAGC...TGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR GCA 90 bp ACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACGCTGGTTGTATGGGTTaGAATGGTCGTGACACAGGC +
Preference number: 4 (lower is better)
Translates to: TSVQEILHKVDFTWGIMHAGCMG*NGRDTG
Trigger: GCCTGTGTCACGACCATTGCAACCCATACAACCAGC...GTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR GCA 90 bp AGTGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGTTTTGGGGATTGACCTaGCGAACAGCAGGAGCCTGC +
Preference number: 4 (lower is better)
Translates to: SVYTHLSKKSCTRWILHGFWGLT*RTAGAC
Trigger: GCAGGCTCCTGCTGTTCGGCAGGTCAATCCCCAAAA...CCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR GCA 90 bp GTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATTCTGGGTGAGAGTACATaGCATGGGCAAGGGAAGTGC +
Preference number: 4 (lower is better)
Translates to: VQEILHKVDFTWGIMHKILGEST*HGQGKC
Trigger: GCACTTCCCTTGCCCATGGCATGTACTCTCACCCAG...AATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp GAAACTAAAAAGGTAACCGTGGAGTGGAAACTGCTACTAGAAAGTCTGTTATCACAGTACTCCGGAGGCTaGATCTCCGGCATCCAGATC +
Preference number: 4 (lower is better)
Translates to: ETKKVTVEWKLLLESLLSQYSGG*ISGIQI
Trigger: GATCTGGATGCCGGAGATCCAGCCTCCGGAGTACTG...TGATAACAGACTTTCTAGTAGCAGTTTCCACTCCACGGTTACCTTTTTAGTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536444.5
CDS-3UTR CCA 90 bp TATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCAGTACTCCGGAGGCTaGATCTCCGGCATCCAGATC +
Preference number: 4 (lower is better)
Translates to: YTHICPRNLAQGGFYMGYQYSGG*ISGIQI
Trigger: GATCTGGATGCCGGAGATCCAGCCTCCGGAGTACTG...ATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp GTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTAAGGGACCGGTTCACCTaGGATGGGATCACTAGAGGT +
Preference number: 4 (lower is better)
Translates to: VYTHLSKKSCTRWILHGVRDRFT*DGITRG
Trigger: ACCTCTAGTGATCCCATCCCAGGTGAACCGGTCCCT...TACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp TGGTGGGCACAATCTAATCAGCTGTCAATGAATACAAAGCAGGCAGAAAAACATAGGGACCGGTTCACCTaGGATGGGATCACTAGAGGT +
Preference number: 4 (lower is better)
Translates to: WWAQSNQLSMNTKQAEKHRDRFT*DGITRG
Trigger: ACCTCTAGTGATCCCATCCCAGGTGAACCGGTCCCT...ATGTTTTTCTGCCTGCTTTGTATTCATTGACAGCTGATTAGATTGTGCCCACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR CCA 90 bp TGGTGGGCACAATCTAATCAGCTGTCAATGAATACAAAGCAGGCAGAAAAACATCAGAGGCTGGATCAGTaGAAGCTGGTGCTCCAGAAG +
Preference number: 4 (lower is better)
Translates to: WWAQSNQLSMNTKQAEKHQRLDQ*KLVLQK
Trigger: CTTCTGGAGCACCAGCTTCCACTGATCCAGCCTCTG...ATGTTTTTCTGCCTGCTTTGTATTCATTGACAGCTGATTAGATTGTGCCCACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR CCA 90 bp CACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAGATCATCAGAGGCTaGATCAGTGGAAGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: HICPRNLAQGGFYMGYHAQIIRG*ISGSWC
Trigger: GCACCAGCTTCCACTGATCCAGCCTCTGATGATCTG...TGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp CTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGACAGATCATCAGAGGCTaGATCAGTGGAAGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: LSKKSCTRWILHGVSCTRQIIRG*ISGSWC
Trigger: GCACCAGCTTCCACTGATCCAGCCTCTGATGATCTG...TCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp TCTTCAGTTTGGGGATTCAGTCTGGCTTTCCTTGCTCAGCTTGCAGACAGCCTAAGTTTGAAAGGATGGTaGTGCACTCTCGCTTACATT +
Preference number: 4 (lower is better)
Translates to: SSVWGFSLAFLAQLADSLSLKGW*CTLAYI
Trigger: AATGTAAGCGAGAGTGCACCACCATCCTTTCAAACT...TAGGCTGTCTGCAAGCTGAGCAAGGAAAGCCAGACTGAATCCCCAAACTGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR CCA 90 bp TCTTCAGTTTGGGGATTCAGTCTGGCTTTCCTTGCTCAGCTTGCAGACAGCCTAGGATGGCAAGGATACTaGATTTTTGGTAAGACCACT +
Preference number: 4 (lower is better)
Translates to: SSVWGFSLAFLAQLADSLGWQGY*IFGKTT
Trigger: AGTGGTCTTACCAAAAATCCAGTATCCTTGCCATCC...TAGGCTGTCTGCAAGCTGAGCAAGGAAAGCCAGACTGAATCCCCAAACTGAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR CCA 90 bp TTCTTCAGTTTGGGGATTCAGTCTGGCTTTCCTTGCTCAGCTTGCAGACAGCCTGGGATTTGGCAAGGATaGCAAGGATACTGGATTTTT +
Preference number: 4 (lower is better)
Translates to: FFSLGIQSGFPCSACRQPGIWQG*QGYWIF
Trigger: AAAAATCCAGTATCCTTGCCATCCTTGCCAAATCCC...AGGCTGTCTGCAAGCTGAGCAAGGAAAGCCAGACTGAATCCCCAAACTGAAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR CCA 90 bp GGAACACCTCTCTGTGAGGCAAATGGTATCTCAACAAATACCGACTTTTCAAGGAAGTGTTGTTCCCAATaGTGCAGCACTGGCAGTAGG +
Preference number: 4 (lower is better)
Translates to: GTPLCEANGISTNTDFSRKCCSQ*CSTGSR
Trigger: CCTACTGCCAGTGCTGCACCATTGGGAACAACACTT...CCTTGAAAAGTCGGTATTTGTTGAGATACCATTTGCCTCACAGAGAGGTGTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536444.5
CDS-3UTR CCA 90 bp TCAGTTTGGGGATTCAGTCTGGCTTTCCTTGCTCAGCTTGCAGACAGCCTATTGCTGGTTTTCAATTCTTaGGGTGGTATTGCTGTTCTG +
Preference number: 4 (lower is better)
Translates to: SVWGFSLAFLAQLADSLLLVFNS*GGIAVL
Trigger: CAGAACAGCAATACCACCCCAAGAATTGAAAACCAG...CAATAGGCTGTCTGCAAGCTGAGCAAGGAAAGCCAGACTGAATCCCCAAACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR CCA 90 bp TGCCCTTCGACACTGGACTCCAAATTCTTCAGTTTGGGGATTCAGTCTGGCTTTTTGAATCACTGCCAGTaGCTTTTCCACACTGTGATG +
Preference number: 4 (lower is better)
Translates to: CPSTLDSKFFSLGIQSGFLNHCQ*LFHTVM
Trigger: CATCACAGTGTGGAAAAGCCACTGGCAGTGATTCAA...AAAGCCAGACTGAATCCCCAAACTGAAGAATTTGGAGTCCAGTGTCGAAGGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR CCA 90 bp TCAGTTTGGGGATTCAGTCTGGCTTTCCTTGCTCAGCTTGCAGACAGCCTATTGGCTGAGAAGAACTCATaGTTGATACAGGAGTGTGAT +
Preference number: 4 (lower is better)
Translates to: SVWGFSLAFLAQLADSLLAEKNS*LIQECD
Trigger: ATCACACTCCTGTATCAACCATGAGTTCTTCTCAGC...CAATAGGCTGTCTGCAAGCTGAGCAAGGAAAGCCAGACTGAATCCCCAAACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR CCA 90 bp ACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACGCGGTGCTGGTTGTATaGGTTGCAATGGTCGTGACA +
Preference number: 4 (lower is better)
Translates to: TSVQEILHKVDFTWGIMHAVLVV*VAMVVT
Trigger: TGTCACGACCATTGCAACCCATACAACCAGCACCGC...GTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp CATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAGCGGTGCTGGTTGTATaGGTTGCAATGGTCGTGACA +
Preference number: 4 (lower is better)
Translates to: HLSKKSCTRWILHGVSCTAVLVV*VAMVVT
Trigger: TGTCACGACCATTGCAACCCATACAACCAGCACCGC...TGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp CTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATATGGTGGTCTGAGATaGTCCACTTGTTGGCACCCC +
Preference number: 4 (lower is better)
Translates to: LSKKSCTRWILHGVSCTRYGGLR*STCWHP
Trigger: GGGGTGCCAACAAGTGGACCATCTCAGACCACCATA...TCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp CATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAGGGAGCCTGAGCTGGTaGTGCAGGAAGAGTTGTATA +
Preference number: 4 (lower is better)
Translates to: HLSKKSCTRWILHGVSCTGSLSW*CRKSCI
Trigger: TATACAACTCTTCCTGCACCACCAGCTCAGGCTCCC...TGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp GTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTACAAGGGAGCCTGAGCTaGTGGTGCAGGAAGAGTTGT +
Preference number: 4 (lower is better)
Translates to: VYTHLSKKSCTRWILHGVQGSLS*WCRKSC
Trigger: ACAACTCTTCCTGCACCACCAGCTCAGGCTCCCTTG...TACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp TGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTCAAGGGAGCCTGAGCTaGTGGTGCAGGAAGAGTTGT +
Preference number: 4 (lower is better)
Translates to: CIHTSVQEILHKVDFTWGQGSLS*WCRKSC
Trigger: ACAACTCTTCCTGCACCACCAGCTCAGGCTCCCTTG...ACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp AGAATCATGCCAGTTACACATCTCAAATCCTTTGATCTACTTACTTCGTACTTTTGGGTGCACGGGGCGTaGGGGCTCAGTATGCACTTG +
Preference number: 4 (lower is better)
Translates to: RIMPVTHLKSFDLLTSYFWVHGA*GLSMHL
Trigger: CAAGTGCATACTGAGCCCCCACGCCCCGTGCACCCA...AAAGTACGAAGTAAGTAGATCAAAGGATTTGAGATGTGTAACTGGCATGATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000536444.5
ENST00000544627.5
CDS-3UTR CCA 90 bp CTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGAATTGTGAGGGCACAGTaGCACTGGGTTCCTCATGGT +
Preference number: 4 (lower is better)
Translates to: LSKKSCTRWILHGVSCTRIVRAQ*HWVPHG
Trigger: ACCATGAGGAACCCAGTGCCACTGTGCCCTCACAAT...TCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp TCTTCAGTTTGGGGATTCAGTCTGGCTTTCCTTGCTCAGCTTGCAGACAGCCTACAGAAAAACATGAAATaGAGAGACTGGCTAGCCTTC +
Preference number: 4 (lower is better)
Translates to: SSVWGFSLAFLAQLADSLQKNMK*RDWLAF
Trigger: GAAGGCTAGCCAGTCTCTCCATTTCATGTTTTTCTG...TAGGCTGTCTGCAAGCTGAGCAAGGAAAGCCAGACTGAATCCCCAAACTGAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR TCA 90 bp ACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACTACAGTTTTTCCTGGTaGTACTGGTGGGTTGGGTGG +
Preference number: 4 (lower is better)
Translates to: TSVQEILHKVDFTWGIMHYSFSW*YWWVGW
Trigger: CCACCCAACCCACCAGTATCACCAGGAAAAACTGTA...GTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR TCA 90 bp GGAACACCTCTCTGTGAGGCAAATGGTATCTCAACAAATACCGACTTTTCAAGGGTATTCACAGGAGTTTaGAAGGATGGTGGTGCACTC +
Preference number: 4 (lower is better)
Translates to: GTPLCEANGISTNTDFSRVFTGV*KDGGAL
Trigger: GAGTGCACCACCATCCTTTCAAACTCCTGTGAATAC...CCTTGAAAAGTCGGTATTTGTTGAGATACCATTTGCCTCACAGAGAGGTGTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536444.5
CDS-3UTR TCA 90 bp CTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGAGCAGTAGGGTTCCTTTaGATACTAGGACTGGGCACA +
Preference number: 4 (lower is better)
Translates to: LSKKSCTRWILHGVSCTRAVGFL*ILGLGT
Trigger: TGTGCCCAGTCCTAGTATTCAAAGGAACCCTACTGC...TCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR TCA 90 bp CATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAGGTCGTGACACAGGCTaGGAAGAACTCATGGTTGAT +
Preference number: 4 (lower is better)
Translates to: HLSKKSCTRWILHGVSCTGRDTG*EELMVD
Trigger: ATCAACCATGAGTTCTTCTCAGCCTGTGTCACGACC...TGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR TCA 90 bp GTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTAGGGTTGCAATGGTCGTaGCACAGGCTGAGAAGAACT +
Preference number: 4 (lower is better)
Translates to: VYTHLSKKSCTRWILHGVGLQWS*HRLRRT
Trigger: AGTTCTTCTCAGCCTGTGTCACGACCATTGCAACCC...TACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR TCA 90 bp AGTGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGGGTTGCAATGGTCGTaGCACAGGCTGAGAAGAACT +
Preference number: 4 (lower is better)
Translates to: SVYTHLSKKSCTRWILHGGLQWS*HRLRRT
Trigger: AGTTCTTCTCAGCCTGTGTCACGACCATTGCAACCC...CCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACACT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR TCA 90 bp GTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATTCACTATTTTGGGGATTaGCCTGCCGAACAGCAGGAG +
Preference number: 4 (lower is better)
Translates to: VQEILHKVDFTWGIMHKIHYFGD*PAEQQE
Trigger: CTCCTGCTGTTCGGCAGGTCAATCCCCAAAATAGTG...AATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR TCA 90 bp CATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAATCTTTTTCCATTGTaGGGGCACAGTGGCACTGGG +
Preference number: 4 (lower is better)
Translates to: HLSKKSCTRWILHGVSCTNLFPL*GHSGTG
Trigger: CCCAGTGCCACTGTGCCCTCACAATGGAAAAAGATT...TGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR TCA 90 bp CTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGAAATCTTTTTCCATTGTaGGGGCACAGTGGCACTGGG +
Preference number: 4 (lower is better)
Translates to: LSKKSCTRWILHGVSCTRNLFPL*GHSGTG
Trigger: CCCAGTGCCACTGTGCCCTCACAATGGAAAAAGATT...TCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR TCA 90 bp CTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGACAGATACAAACTGGGTaGGAGTACATGCCATGGGCA +
Preference number: 4 (lower is better)
Translates to: LSKKSCTRWILHGVSCTRQIQTG*EYMPWA
Trigger: TGCCCATGGCATGTACTCTCACCCAGTTTGTATCTG...TCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR TCA 90 bp CACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCAGACAAGTCTCCTCACTaGCATACTTGCTGCCTAAGC +
Preference number: 4 (lower is better)
Translates to: HICPRNLAQGGFYMGYHADKSPH*HTCCLS
Trigger: GCTTAGGCAGCAAGTATGTCAGTGAGGAGACTTGTC...TGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544627.5
CDS-3UTR TCA 90 bp TCTTCAGTTTGGGGATTCAGTCTGGCTTTCCTTGCTCAGCTTGCAGACAGCCTAATGGCTAAATCTAGCTaGCATATGCATGATCTCACA +
Preference number: 4 (lower is better)
Translates to: SSVWGFSLAFLAQLADSLMAKSS*HMHDLT
Trigger: TGTGAGATCATGCATATGTCAGCTAGATTTAGCCAT...TAGGCTGTCTGCAAGCTGAGCAAGGAAAGCCAGACTGAATCCCCAAACTGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR TCA 90 bp TTCTTCAGTTTGGGGATTCAGTCTGGCTTTCCTTGCTCAGCTTGCAGACAGCCTCTAATCAGCTGTCAATaGATACAAAGCAGGCAGAAA +
Preference number: 4 (lower is better)
Translates to: FFSLGIQSGFPCSACRQPLISCQ*IQSRQK
Trigger: TTTCTGCCTGCTTTGTATTCATTGACAGCTGATTAG...AGGCTGTCTGCAAGCTGAGCAAGGAAAGCCAGACTGAATCCCCAAACTGAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR GCA 90 bp TGCCCTTCGACACTGGACTCCAAATTCTTCAGTTTGGGGATTCAGTCTGGCTTTTTGACTACTGACAACTaGTGGAGGAGTGACAAGATT +
Preference number: 4 (lower is better)
Translates to: CPSTLDSKFFSLGIQSGFLTTDN*WRSDKI
Trigger: AATCTTGTCACTCCTCCAGCAGTTGTCAGTAGTCAA...AAAGCCAGACTGAATCCCCAAACTGAAGAATTTGGAGTCCAGTGTCGAAGGGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR GCA 90 bp CACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCATGTTGTTCCCAATGGTaGAGCACTGGCAGTAGGGTT +
Preference number: 4 (lower is better)
Translates to: HICPRNLAQGGFYMGYHACCSQW*STGSRV
Trigger: AACCCTACTGCCAGTGCTGCACCATTGGGAACAACA...TGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR GCA 90 bp TTCTTCAGTTTGGGGATTCAGTCTGGCTTTCCTTGCTCAGCTTGCAGACAGCCTATTGCTGTTCTGTTCTaGAGCAGACGAAGTACTAAA +
Preference number: 4 (lower is better)
Translates to: FFSLGIQSGFPCSACRQPIAVLF*SRRSTK
Trigger: TTTAGTACTTCGTCTGCTGCAGAACAGAACAGCAAT...AGGCTGTCTGCAAGCTGAGCAAGGAAAGCCAGACTGAATCCCCAAACTGAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR GCA 90 bp TGCCCTTCGACACTGGACTCCAAATTCTTCAGTTTGGGGATTCAGTCTGGCTTTTTCCACACTGTGATGTaGTATCAGCTGCTTTCTTAC +
Preference number: 4 (lower is better)
Translates to: CPSTLDSKFFSLGIQSGFFHTVM*YQLLSY
Trigger: GTAAGAAAGCAGCTGATAGCACATCACAGTGTGGAA...AAAGCCAGACTGAATCCCCAAACTGAAGAATTTGGAGTCCAGTGTCGAAGGGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR GCA 90 bp TACACTGCAGAATGGCTAAATCTAGCTGACATATGCATGATCTCACATACTTACTTTTGGGGATTGACCTaGCGAACAGCAGGAGCCTGC +
Preference number: 4 (lower is better)
Translates to: YTAEWLNLADICMISHTYFWGLT*RTAGAC
Trigger: GCAGGCTCCTGCTGTTCGGCAGGTCAATCCCCAAAA...GTAAGTATGTGAGATCATGCATATGTCAGCTAGATTTAGCCATTCTGCAGTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR CCA 90 bp GTTTGGGGATTCAGTCTGGCTTTCCTTGCTCAGCTTGCAGACAGCCTATTGAGGAGGCAGTTTAGAGACTaGTTCTGGAGTTATATTATG +
Preference number: 4 (lower is better)
Translates to: VWGFSLAFLAQLADSLLRRQFRD*FWSYIM
Trigger: CATAATATAACTCCAGAACCAGTCTCTAAACTGCCT...CCTCAATAGGCTGTCTGCAAGCTGAGCAAGGAAAGCCAGACTGAATCCCCAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR CCA 90 bp TGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATCAGATCACCAGGGGCTaGATCACCAGAAACTGGTTC +
Preference number: 4 (lower is better)
Translates to: CPRNLAQGGFYMGYHAQDQITRG*ITRNWF
Trigger: GAACCAGTTTCTGGTGATCCAGCCCCTGGTGATCTG...ATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp CAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATTAAACAGTACTCCGGAGGCTaGATCTCCGGCATCCAGATC +
Preference number: 4 (lower is better)
Translates to: QEILHKVDFTWGIMHKIKQYSGG*ISGIQI
Trigger: GATCTGGATGCCGGAGATCCAGCCTCCGGAGTACTG...TTTAATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp TATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCAGAGGCTGGATCAGTaGAAGCTGGTGCTCCAGAAG +
Preference number: 4 (lower is better)
Translates to: YTHICPRNLAQGGFYMGYQRLDQ*KLVLQK
Trigger: CTTCTGGAGCACCAGCTTCCACTGATCCAGCCTCTG...ATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp TCTTCAGTTTGGGGATTCAGTCTGGCTTTCCTTGCTCAGCTTGCAGACAGCCTACAGAAAGGCTTCTTTTaGCAAACTCTCACTACTTTC +
Preference number: 4 (lower is better)
Translates to: SSVWGFSLAFLAQLADSLQKGFF*QTLTTF
Trigger: GAAAGTAGTGAGAGTTTGCCAAAAGAAGCCTTTCTG...TAGGCTGTCTGCAAGCTGAGCAAGGAAAGCCAGACTGAATCCCCAAACTGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR CCA 90 bp TTCTTCAGTTTGGGGATTCAGTCTGGCTTTCCTTGCTCAGCTTGCAGACAGCCTAGAAGGAACGTTGTTTaGTTTAGTGGGATTTGGCAA +
Preference number: 4 (lower is better)
Translates to: FFSLGIQSGFPCSACRQPRRNVV*FSGIWQ
Trigger: TTGCCAAATCCCACTAAACCAAACAACGTTCCTTCT...AGGCTGTCTGCAAGCTGAGCAAGGAAAGCCAGACTGAATCCCCAAACTGAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR CCA 90 bp AGTGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGCTGATGGGCCCACTGTaGGTAAAGAAGTCCTTGTGG +
Preference number: 4 (lower is better)
Translates to: SVYTHLSKKSCTRWILHGLMGPL*VKKSLW
Trigger: CCACAAGGACTTCTTTACCCACAGTGGGCCCATCAG...CCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp GTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATTCTGATGGGCCCACTGTaGGTAAAGAAGTCCTTGTGG +
Preference number: 4 (lower is better)
Translates to: VQEILHKVDFTWGIMHKILMGPL*VKKSLW
Trigger: CCACAAGGACTTCTTTACCCACAGTGGGCCCATCAG...AATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp CATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACATTGAAGAGGCGGTGCTaGTTGTATGGGTTGCAATGG +
Preference number: 4 (lower is better)
Translates to: HLSKKSCTRWILHGVSCTLKRRC*LYGLQW
Trigger: CCATTGCAACCCATACAACCAGCACCGCCTCTTCAA...TGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp CACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCATTGAAGAGGCGGTGCTaGTTGTATGGGTTGCAATGG +
Preference number: 4 (lower is better)
Translates to: HICPRNLAQGGFYMGYHALKRRC*LYGLQW
Trigger: CCATTGCAACCCATACAACCAGCACCGCCTCTTCAA...TGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp TGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATTATGGTGGTCTGAGATaGTCCACTTGTTGGCACCCC +
Preference number: 4 (lower is better)
Translates to: CPRNLAQGGFYMGYHAQDYGGLR*STCWHP
Trigger: GGGGTGCCAACAAGTGGACCATCTCAGACCACCATA...ATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp CTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGAGTTTGCAGGAGCTCTTaGTACAGGGAGTCTTGTGGT +
Preference number: 4 (lower is better)
Translates to: LSKKSCTRWILHGVSCTRVCRSS*YRESCG
Trigger: ACCACAAGACTCCCTGTACCAAGAGCTCCTGCAAAC...TCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp CTTCAAAACCCTAATAAAAATAGGGCCACTTGCTGGAGCCCAGTTTGTATTAGAGGGAGCCTGAGCTGGTaGTGCAGGAAGAGTTGTATA +
Preference number: 4 (lower is better)
Translates to: LQNPNKNRATCWSPVCIRGSLSW*CRKSCI
Trigger: TATACAACTCTTCCTGCACCACCAGCTCAGGCTCCC...TCTAATACAAACTGGGCTCCAGCAAGTGGCCCTATTTTTATTAGGGTTTTGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536444.5
CDS-3UTR CCA 90 bp CTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGAAGTATGCACTTGTGGTaGTCGGTGATGCACTGTGAG +
Preference number: 4 (lower is better)
Translates to: LSKKSCTRWILHGVSCTRSMHLW*SVMHCE
Trigger: CTCACAGTGCATCACCGACCACCACAAGTGCATACT...TCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp CACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACTCAGTATGCACTTGTaGTGGTCGGTGATGCACTGT +
Preference number: 4 (lower is better)
Translates to: HICPRNLAQGGFYMGYHALSMHL*WSVMHC
Trigger: ACAGTGCATCACCGACCACCACAAGTGCATACTGAG...TGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp CTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGAGGTAGCTATCAACAGTaGCACAGCTTCGATCCACCT +
Preference number: 4 (lower is better)
Translates to: LSKKSCTRWILHGVSCTRGSYQQ*HSFDPP
Trigger: AGGTGGATCGAAGCTGTGCCACTGTTGATAGCTACC...TCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp GTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTAAGGGCACAGTGGCACTaGGTTCCTCATGGTAAGCAT +
Preference number: 4 (lower is better)
Translates to: VYTHLSKKSCTRWILHGVRAQWH*VPHGKH
Trigger: ATGCTTACCATGAGGAACCCAGTGCCACTGTGCCCT...TACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp TGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATATTGTGAGGGCACAGTaGCACTGGGTTCCTCATGGT +
Preference number: 4 (lower is better)
Translates to: CPRNLAQGGFYMGYHAQDIVRAQ*HWVPHG
Trigger: ACCATGAGGAACCCAGTGCCACTGTGCCCTCACAAT...ATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp AACACCCACACATATTCCCCAGCCTCAAAACTAAAGCAAGGTACACATTTACATATTGTGAGGGCACAGTaGCACTGGGTTCCTCATGGT +
Preference number: 4 (lower is better)
Translates to: NTHTYSPASKLKQGTHLHIVRAQ*HWVPHG
Trigger: ACCATGAGGAACCCAGTGCCACTGTGCCCTCACAAT...ATGTAAATGTGTACCTTGCTTTAGTTTTGAGGCTGGGGAATATGTGTGGGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536444.5
ENST00000544627.5
CDS-3UTR CCA 90 bp TGCCCTTCGACACTGGACTCCAAATTCTTCAGTTTGGGGATTCAGTCTGGCTTTCCAAATTCTTCAGTTTaGGGATTCAGTCTGGCTTTC +
Preference number: 4 (lower is better)
Translates to: CPSTLDSKFFSLGIQSGFPNSSV*GFSLAF
Trigger: GAAAGCCAGACTGAATCCCCAAACTGAAGAATTTGG...AAAGCCAGACTGAATCCCCAAACTGAAGAATTTGGAGTCCAGTGTCGAAGGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR TCA 90 bp ACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACCATGTTTTCCAAAGGTaGGGTTGGGTCCAAATCTCC +
Preference number: 4 (lower is better)
Translates to: TSVQEILHKVDFTWGIMHHVFQR*GWVQIS
Trigger: GGAGATTTGGACCCAACCTCACCTTTGGAAAACATG...GTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR TCA 90 bp CAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATTAAAGAACTGACGTTGCTGTaGGGGAACCCGAAGTCACTG +
Preference number: 4 (lower is better)
Translates to: QEILHKVDFTWGIMHKIKELTLL*GNPKSL
Trigger: CAGTGACTTCGGGTTCCCTCACAGCAACGTCAGTTC...TTTAATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR TCA 90 bp TTTCACCTAATTAACAACTCAGGAGACCAGACAAAAGAAACAACAAATAGATCCGGGTGCAGGAAGAACTaGCGTTGCTGTGAGGGAACC +
Preference number: 4 (lower is better)
Translates to: FHLINNSGDQTKETTNRSGCRKN*RCCEGT
Trigger: GGTTCCCTCACAGCAACGTCAGTTCTTCCTGCACCC...GGATCTATTTGTTGTTTCTTTTGTCTGGTCTCCTGAGTTGTTAATTAGGTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536444.5
ENST00000544627.5
CDS-3UTR TCA 90 bp TGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATGCAGTAGGGTTCCTTTaGATACTAGGACTGGGCACA +
Preference number: 4 (lower is better)
Translates to: CPRNLAQGGFYMGYHAQDAVGFL*ILGLGT
Trigger: TGTGCCCAGTCCTAGTATTCAAAGGAACCCTACTGC...ATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR TCA 90 bp TGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTGCAGTAGGGTTCCTTTaGATACTAGGACTGGGCACA +
Preference number: 4 (lower is better)
Translates to: CIHTSVQEILHKVDFTWGAVGFL*ILGLGT
Trigger: TGTGCCCAGTCCTAGTATTCAAAGGAACCCTACTGC...ACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR TCA 90 bp TGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATGGTCGTGACACAGGCTaGGAAGAACTCATGGTTGAT +
Preference number: 4 (lower is better)
Translates to: CPRNLAQGGFYMGYHAQDGRDTG*EELMVD
Trigger: ATCAACCATGAGTTCTTCTCAGCCTGTGTCACGACC...ATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR TCA 90 bp ACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACCTCCAGGACACTCCATaGCAGTACTATGCCATTTTG +
Preference number: 4 (lower is better)
Translates to: TSVQEILHKVDFTWGIMHLQDTP*QYYAIL
Trigger: CAAAATGGCATAGTACTGTCATGGAGTGTCCTGGAG...GTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR TCA 90 bp TGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTGCAAGGGAAGTGCCTTaGCTTCCCCAATCTTTTTCC +
Preference number: 4 (lower is better)
Translates to: CIHTSVQEILHKVDFTWGAREVP*LPQSFS
Trigger: GGAAAAAGATTGGGGAAGTCAAGGCACTTCCCTTGC...ACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR TCA 90 bp GTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTACAGATACAAACTGGGTaGGAGTACATGCCATGGGCA +
Preference number: 4 (lower is better)
Translates to: VYTHLSKKSCTRWILHGVQIQTG*EYMPWA
Trigger: TGCCCATGGCATGTACTCTCACCCAGTTTGTATCTG...TACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR TCA 90 bp CTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGAATCACATCTGTTGACTaGGGATCACAGAAAGGCCCA +
Preference number: 4 (lower is better)
Translates to: LSKKSCTRWILHGVSCTRITSVD*GSQKGP
Trigger: TGGGCCTTTCTGTGATCCTCAGTCAACAGATGTGAT...TCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR TCA 90 bp ACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACATCACATCTGTTGACTaGGGATCACAGAAAGGCCCA +
Preference number: 4 (lower is better)
Translates to: TSVQEILHKVDFTWGIMHITSVD*GSQKGP
Trigger: TGGGCCTTTCTGTGATCCTCAGTCAACAGATGTGAT...GTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR TCA 90 bp TTTCACCTAATTAACAACTCAGGAGACCAGACAAAAGAAACAACAAATAGATCCCCCAAAACACCTACCTaGCACCAGTACAGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: FHLINNSGDQTKETTNRSPKTPT*HQYSWP
Trigger: GGGCCAGCTGTACTGGTGTCAGGTAGGTGTTTTGGG...GGATCTATTTGTTGTTTCTTTTGTCTGGTCTCCTGAGTTGTTAATTAGGTGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000536444.5
CDS-3UTR GCA 90 bp TTCTTCAGTTTGGGGATTCAGTCTGGCTTTCCTTGCTCAGCTTGCAGACAGCCTGAGCACGTTTCATTTTaGGATATAACTTCAGACTCA +
Preference number: 4 (lower is better)
Translates to: FFSLGIQSGFPCSACRQPEHVSF*DITSDS
Trigger: TGAGTCTGAAGTTATATCGCAAAATGAAACGTGCTC...AGGCTGTCTGCAAGCTGAGCAAGGAAAGCCAGACTGAATCCCCAAACTGAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR GCA 90 bp TGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATTGTTGTTCCCAATGGTaGAGCACTGGCAGTAGGGTT +
Preference number: 4 (lower is better)
Translates to: CPRNLAQGGFYMGYHAQDCCSQW*STGSRV
Trigger: AACCCTACTGCCAGTGCTGCACCATTGGGAACAACA...ATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR GCA 90 bp GTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATTTGTTGTTCCCAATGGTaGAGCACTGGCAGTAGGGTT +
Preference number: 4 (lower is better)
Translates to: VQEILHKVDFTWGIMHKICCSQW*STGSRV
Trigger: AACCCTACTGCCAGTGCTGCACCATTGGGAACAACA...AATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR GCA 90 bp TATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATGCTGGTTGTATGGGTTaGAATGGTCGTGACACAGGC +
Preference number: 4 (lower is better)
Translates to: YTHICPRNLAQGGFYMGYAGCMG*NGRDTG
Trigger: GCCTGTGTCACGACCATTGCAACCCATACAACCAGC...ATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR GCA 90 bp AACACCCACACATATTCCCCAGCCTCAAAACTAAAGCAAGGTACACATTTACATTGGTTGAAGAGGCGGTaGTGGTTGTATGGGTTGCAA +
Preference number: 4 (lower is better)
Translates to: NTHTYSPASKLKQGTHLHWLKRR*WLYGLQ
Trigger: TTGCAACCCATACAACCAGCACCGCCTCTTCAACCA...ATGTAAATGTGTACCTTGCTTTAGTTTTGAGGCTGGGGAATATGTGTGGGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536444.5
ENST00000544627.5
CDS-3UTR GCA 90 bp TGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTTGGTTGAAGAGGCGGTaGTGGTTGTATGGGTTGCAA +
Preference number: 4 (lower is better)
Translates to: CIHTSVQEILHKVDFTWGWLKRR*WLYGLQ
Trigger: TTGCAACCCATACAACCAGCACCGCCTCTTCAACCA...ACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR GCA 90 bp GAAACTAAAAAGGTAACCGTGGAGTGGAAACTGCTACTAGAAAGTCTGTTATCAAACCACCTGGTGGTTTaGAGGAGCTCTTGGTACAGG +
Preference number: 4 (lower is better)
Translates to: ETKKVTVEWKLLLESLLSNHLVV*RSSWYR
Trigger: CCTGTACCAAGAGCTCCTGCAAACCACCAGGTGGTT...TGATAACAGACTTTCTAGTAGCAGTTTCCACTCCACGGTTACCTTTTTAGTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536444.5
CDS-3UTR GCA 90 bp TATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATAACCACCTGGTGGTTTaGAGGAGCTCTTGGTACAGG +
Preference number: 4 (lower is better)
Translates to: YTHICPRNLAQGGFYMGYNHLVV*RSSWYR
Trigger: CCTGTACCAAGAGCTCCTGCAAACCACCAGGTGGTT...ATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR GCA 90 bp CAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATTAAATTTTGGGGATTGACCTaGCGAACAGCAGGAGCCTGC +
Preference number: 4 (lower is better)
Translates to: QEILHKVDFTWGIMHKIKFWGLT*RTAGAC
Trigger: GCAGGCTCCTGCTGTTCGGCAGGTCAATCCCCAAAA...TTTAATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp CAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATTAAAAGGGACCGGTTCACCTaGGATGGGATCACTAGAGGT +
Preference number: 4 (lower is better)
Translates to: QEILHKVDFTWGIMHKIKRDRFT*DGITRG
Trigger: ACCTCTAGTGATCCCATCCCAGGTGAACCGGTCCCT...TTTAATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp CACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACACAATCACCAGAAATaGGTTCAACAGGGACCGGTT +
Preference number: 4 (lower is better)
Translates to: HICPRNLAQGGFYMGYHAHNHQK*VQQGPV
Trigger: AACCGGTCCCTGTTGAACCCATTTCTGGTGATTGTG...TGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp TGCCCTTCGACACTGGACTCCAAATTCTTCAGTTTGGGGATTCAGTCTGGCTTTGTCAATTTCAGGAACTaGTTCACAAACTGGTACAGA +
Preference number: 4 (lower is better)
Translates to: CPSTLDSKFFSLGIQSGFVNFRN*FTNWYR
Trigger: TCTGTACCAGTTTGTGAACCAGTTCCTGAAATTGAC...AAAGCCAGACTGAATCCCCAAACTGAAGAATTTGGAGTCCAGTGTCGAAGGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR CCA 90 bp CATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAGGAACCCGAAGTCACTaGAGTCTGCAATTTAGGTTG +
Preference number: 4 (lower is better)
Translates to: HLSKKSCTRWILHGVSCTGTRSH*SLQFRL
Trigger: CAACCTAAATTGCAGACTCCAGTGACTTCGGGTTCC...TGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp TCAGTTTGGGGATTCAGTCTGGCTTTCCTTGCTCAGCTTGCAGACAGCCTATTGTTCAACATTGCCAGATaGTTGATTAGTCACCAAAGT +
Preference number: 4 (lower is better)
Translates to: SVWGFSLAFLAQLADSLLFNIAR*LISHQS
Trigger: ACTTTGGTGACTAATCAACCATCTGGCAATGTTGAA...CAATAGGCTGTCTGCAAGCTGAGCAAGGAAAGCCAGACTGAATCCCCAAACTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR CCA 90 bp CATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAATAGAGTGTGCTGTTaGAACAGCCTGCACAGCAAG +
Preference number: 4 (lower is better)
Translates to: HLSKKSCTRWILHGVSCTNRVCC*NSLHSK
Trigger: CTTGCTGTGCAGGCTGTTCCAACAGCACACTCTATT...TGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp TACACTGCAGAATGGCTAAATCTAGCTGACATATGCATGATCTCACATACTTACCTGATGGGCCCACTGTaGGTAAAGAAGTCCTTGTGG +
Preference number: 4 (lower is better)
Translates to: YTAEWLNLADICMISHTYLMGPL*VKKSLW
Trigger: CCACAAGGACTTCTTTACCCACAGTGGGCCCATCAG...GTAAGTATGTGAGATCATGCATATGTCAGCTAGATTTAGCCATTCTGCAGTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR CCA 90 bp AAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATTAAAATGTTGGCACCCCAGATaGTTGAAGAGGCGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: KKSCTRWILHGVSCTRLKCWHPR*LKRRCW
Trigger: CCAGCACCGCCTCTTCAACCATCTGGGGTGCCAACA...TTTTAATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp TGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTAGATGGTCCACTTGTTaGCACCCCAGATGGTTGAAG +
Preference number: 4 (lower is better)
Translates to: CIHTSVQEILHKVDFTWGRWSTC*HPRWLK
Trigger: CTTCAACCATCTGGGGTGCCAACAAGTGGACCATCT...ACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp GTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTAAGATGGTCCACTTGTTaGCACCCCAGATGGTTGAAG +
Preference number: 4 (lower is better)
Translates to: VYTHLSKKSCTRWILHGVRWSTC*HPRWLK
Trigger: CTTCAACCATCTGGGGTGCCAACAAGTGGACCATCT...TACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp GTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATTGTACAGGGAGTCTTGTaGTCACCTGAGTTACTGGAC +
Preference number: 4 (lower is better)
Translates to: VQEILHKVDFTWGIMHKIVQGVL*SPELLD
Trigger: GTCCAGTAACTCAGGTGACCACAAGACTCCCTGTAC...AATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp TACACTGCAGAATGGCTAAATCTAGCTGACATATGCATGATCTCACATACTTACGGGAGCCTGAGCTGGTaGTGCAGGAAGAGTTGTATA +
Preference number: 4 (lower is better)
Translates to: YTAEWLNLADICMISHTYGSLSW*CRKSCI
Trigger: TATACAACTCTTCCTGCACCACCAGCTCAGGCTCCC...GTAAGTATGTGAGATCATGCATATGTCAGCTAGATTTAGCCATTCTGCAGTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR CCA 90 bp CTTCAAAACCCTAATAAAAATAGGGCCACTTGCTGGAGCCCAGTTTGTATTAGAAGTATGCACTTGTGGTaGTCGGTGATGCACTGTGAG +
Preference number: 4 (lower is better)
Translates to: LQNPNKNRATCWSPVCIRSMHLW*SVMHCE
Trigger: CTCACAGTGCATCACCGACCACCACAAGTGCATACT...TCTAATACAAACTGGGCTCCAGCAAGTGGCCCTATTTTTATTAGGGTTTTGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536444.5
CDS-3UTR CCA 90 bp GTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATTAGTATGCACTTGTGGTaGTCGGTGATGCACTGTGAG +
Preference number: 4 (lower is better)
Translates to: VQEILHKVDFTWGIMHKISMHLW*SVMHCE
Trigger: CTCACAGTGCATCACCGACCACCACAAGTGCATACT...AATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp TGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTCTCAGTATGCACTTGTaGTGGTCGGTGATGCACTGT +
Preference number: 4 (lower is better)
Translates to: CIHTSVQEILHKVDFTWGLSMHL*WSVMHC
Trigger: ACAGTGCATCACCGACCACCACAAGTGCATACTGAG...ACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp TGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTGGTAGCTATCAACAGTaGCACAGCTTCGATCCACCT +
Preference number: 4 (lower is better)
Translates to: CIHTSVQEILHKVDFTWGGSYQQ*HSFDPP
Trigger: AGGTGGATCGAAGCTGTGCCACTGTTGATAGCTACC...ACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp TATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATTTCCTCCCCATTGGCTaGCTCAAGGGGATGAATGAG +
Preference number: 4 (lower is better)
Translates to: YTHICPRNLAQGGFYMGYFLPIG*LKGMNE
Trigger: CTCATTCATCCCCTTGAGCCAGCCAATGGGGAGGAA...ATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000536444.5
CDS-3UTR CCA 90 bp TGGTGGGCACAATCTAATCAGCTGTCAATGAATACAAAGCAGGCAGAAAAACATAGGCAGAAAATGGGCTaGAGAAGGCAGATCCACCTT +
Preference number: 4 (lower is better)
Translates to: WWAQSNQLSMNTKQAEKHRQKMG*RRQIHL
Trigger: AAGGTGGATCTGCCTTCTCCAGCCCATTTTCTGCCT...ATGTTTTTCTGCCTGCTTTGTATTCATTGACAGCTGATTAGATTGTGCCCACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR CCA 90 bp TGCCCTTCGACACTGGACTCCAAATTCTTCAGTTTGGGGATTCAGTCTGGCTTTGATCCACCTTTAATCTaGTGTGCACAATCTAATCAG +
Preference number: 4 (lower is better)
Translates to: CPSTLDSKFFSLGIQSGFDPPLI*CAQSNQ
Trigger: CTGATTAGATTGTGCACACCAGATTAAAGGTGGATC...AAAGCCAGACTGAATCCCCAAACTGAAGAATTTGGAGTCCAGTGTCGAAGGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR TCA 90 bp GTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTACTAAACTGTCCATTCTaGATCTTTTGGGGCGGAAGC +
Preference number: 4 (lower is better)
Translates to: VYTHLSKKSCTRWILHGVLNCPF*IFWGGS
Trigger: GCTTCCGCCCCAAAAGATTCAGAATGGACAGTTTAG...TACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000536444.5
CDS-3UTR TCA 90 bp TGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTACTGCTTCAAGTTGCTaGCGATCACTCACTCTCATC +
Preference number: 4 (lower is better)
Translates to: CIHTSVQEILHKVDFTWGTASSC*RSLTLI
Trigger: GATGAGAGTGAGTGATCGTCAGCAACTTGAAGCAGT...ACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR TCA 90 bp GTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTACATGTTTTCCAAAGGTaGGGTTGGGTCCAAATCTCC +
Preference number: 4 (lower is better)
Translates to: VYTHLSKKSCTRWILHGVHVFQR*GWVQIS
Trigger: GGAGATTTGGACCCAACCTCACCTTTGGAAAACATG...TACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR TCA 90 bp CACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCAGGTACGATCAAAGGTTaGTTCAGAAGTCAGCTCATC +
Preference number: 4 (lower is better)
Translates to: HICPRNLAQGGFYMGYHAGTIKG*FRSQLI
Trigger: GATGAGCTGACTTCTGAATCAACCTTTGATCGTACC...TGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR TCA 90 bp TATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATTACAGTTTTTCCTGGTaGTACTGGTGGGTTGGGTGG +
Preference number: 4 (lower is better)
Translates to: YTHICPRNLAQGGFYMGYYSFSW*YWWVGW
Trigger: CCACCCAACCCACCAGTATCACCAGGAAAAACTGTA...ATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR TCA 90 bp AGTGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATTCACAGGAGTTTaGAAGGATGGTGGTGCACTC +
Preference number: 4 (lower is better)
Translates to: SVYTHLSKKSCTRWILHGVFTGV*KDGGAL
Trigger: GAGTGCACCACCATCCTTTCAAACTCCTGTGAATAC...CCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR TCA 90 bp ACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACGTCTGCAATTTAGGTTaGCTACTGACAACTGCTGGA +
Preference number: 4 (lower is better)
Translates to: TSVQEILHKVDFTWGIMHVCNLG*LLTTAG
Trigger: TCCAGCAGTTGTCAGTAGTCAACCTAAATTGCAGAC...GTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR TCA 90 bp AAATGTAGTGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTAGAACTGACGTTGCTGTaGGGGAACCCGAAGTCACTG +
Preference number: 4 (lower is better)
Translates to: KCSVYTHLSKKSCTRWILELTLL*GNPKSL
Trigger: CAGTGACTTCGGGTTCCCTCACAGCAACGTCAGTTC...TAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACACTACATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR TCA 90 bp TTTCACCTAATTAACAACTCAGGAGACCAGACAAAAGAAACAACAAATAGATCCTGGCTCTGTAGAAGCTaGGGCTGGGAGGATACTGCA +
Preference number: 4 (lower is better)
Translates to: FHLINNSGDQTKETTNRSWLCRS*GWEDTA
Trigger: TGCAGTATCCTCCCAGCCTCAGCTTCTACAGAGCCA...GGATCTATTTGTTGTTTCTTTTGTCTGGTCTCCTGAGTTGTTAATTAGGTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536444.5
ENST00000544627.5
CDS-3UTR TCA 90 bp CACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCAACATTGCCAGATGGTTaGTTAGTCACCAAAGTCCCT +
Preference number: 4 (lower is better)
Translates to: HICPRNLAQGGFYMGYHATLPDG*LVTKVP
Trigger: AGGGACTTTGGTGACTAATCAACCATCTGGCAATGT...TGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR TCA 90 bp GTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTAGGCTTTTCCACACTGTaGTGTGCTATCAGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: VYTHLSKKSCTRWILHGVGFSTL*CAISCF
Trigger: AAAGCAGCTGATAGCACATCACAGTGTGGAAAAGCC...TACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR TCA 90 bp GTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATTGGCTTTTCCACACTGTaGTGTGCTATCAGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: VQEILHKVDFTWGIMHKIGFSTL*CAISCF
Trigger: AAAGCAGCTGATAGCACATCACAGTGTGGAAAAGCC...AATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR TCA 90 bp TACACTGCAGAATGGCTAAATCTAGCTGACATATGCATGATCTCACATACTTACGGTCGTGACACAGGCTaGGAAGAACTCATGGTTGAT +
Preference number: 4 (lower is better)
Translates to: YTAEWLNLADICMISHTYGRDTG*EELMVD
Trigger: ATCAACCATGAGTTCTTCTCAGCCTGTGTCACGACC...GTAAGTATGTGAGATCATGCATATGTCAGCTAGATTTAGCCATTCTGCAGTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR TCA 90 bp CAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATTAAAGGGTTGCAATGGTCGTaGCACAGGCTGAGAAGAACT +
Preference number: 4 (lower is better)
Translates to: QEILHKVDFTWGIMHKIKGLQWS*HRLRRT
Trigger: AGTTCTTCTCAGCCTGTGTCACGACCATTGCAACCC...TTTAATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR TCA 90 bp TACACTGCAGAATGGCTAAATCTAGCTGACATATGCATGATCTCACATACTTACAAGTGTATGGTGGTCTaGGATGGTCCACTTGTTGGC +
Preference number: 4 (lower is better)
Translates to: YTAEWLNLADICMISHTYKCMVV*DGPLVG
Trigger: GCCAACAAGTGGACCATCTCAGACCACCATACACTT...GTAAGTATGTGAGATCATGCATATGTCAGCTAGATTTAGCCATTCTGCAGTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR TCA 90 bp AACACCCACACATATTCCCCAGCCTCAAAACTAAAGCAAGGTACACATTTACATAGTCTTGTGGTCACCTaGGTTACTGGACGATGTGTT +
Preference number: 4 (lower is better)
Translates to: NTHTYSPASKLKQGTHLHSLVVT*VTGRCV
Trigger: AACACATCGTCCAGTAACTCAGGTGACCACAAGACT...ATGTAAATGTGTACCTTGCTTTAGTTTTGAGGCTGGGGAATATGTGTGGGTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536444.5
ENST00000544627.5
CDS-3UTR TCA 90 bp TGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTAGTCTTGTGGTCACCTaGGTTACTGGACGATGTGTT +
Preference number: 4 (lower is better)
Translates to: CIHTSVQEILHKVDFTWGSLVVT*VTGRCV
Trigger: AACACATCGTCCAGTAACTCAGGTGACCACAAGACT...ACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR TCA 90 bp AACAAATGTAGTGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTCACTATTTTGGGGATTaGCCTGCCGAACAGCAGGAG +
Preference number: 4 (lower is better)
Translates to: NKCSVYTHLSKKSCTRWIHYFGD*PAEQQE
Trigger: CTCCTGCTGTTCGGCAGGTCAATCCCCAAAATAGTG...AATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACACTACATTTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR TCA 90 bp AATGAAAATGGGAGACTCCAATGCAATAACACCTACATAAGGAAAAACACACATGTCGGTGATGCACTGTaGGCTGAGGTCCTGTTGATC +
Preference number: 4 (lower is better)
Translates to: NENGRLQCNNTYIRKNTHVGDAL*AEVLLI
Trigger: GATCAACAGGACCTCAGCTCACAGTGCATCACCGAC...ATGTGTGTTTTTCCTTATGTAGGTGTTATTGCATTGGAGTCTCCCATTTTCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536444.5
ENST00000544627.5
CDS-3UTR TCA 90 bp AAATGTAGTGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTAGTCGGTGATGCACTGTaGGCTGAGGTCCTGTTGATC +
Preference number: 4 (lower is better)
Translates to: KCSVYTHLSKKSCTRWILVGDAL*AEVLLI
Trigger: GATCAACAGGACCTCAGCTCACAGTGCATCACCGAC...TAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACACTACATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR TCA 90 bp TGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATCTCCAGGACACTCCATaGCAGTACTATGCCATTTTG +
Preference number: 4 (lower is better)
Translates to: CPRNLAQGGFYMGYHAQDLQDTP*QYYAIL
Trigger: CAAAATGGCATAGTACTGTCATGGAGTGTCCTGGAG...ATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR TCA 90 bp TATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATGCAAGGGAAGTGCCTTaGCTTCCCCAATCTTTTTCC +
Preference number: 4 (lower is better)
Translates to: YTHICPRNLAQGGFYMGYAREVP*LPQSFS
Trigger: GGAAAAAGATTGGGGAAGTCAAGGCACTTCCCTTGC...ATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR TCA 90 bp CACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCAAGAGATCACATCTGTTaGCTGAGGATCACAGAAAGG +
Preference number: 4 (lower is better)
Translates to: HICPRNLAQGGFYMGYHARDHIC*LRITER
Trigger: CCTTTCTGTGATCCTCAGTCAACAGATGTGATCTCT...TGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR TCA 90 bp ACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAGAGATCACATCTGTTaGCTGAGGATCACAGAAAGG +
Preference number: 4 (lower is better)
Translates to: TSVQEILHKVDFTWGIMHRDHIC*LRITER
Trigger: CCTTTCTGTGATCCTCAGTCAACAGATGTGATCTCT...GTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR GCA 90 bp TGCCCTTCGACACTGGACTCCAAATTCTTCAGTTTGGGGATTCAGTCTGGCTTTTCTTCATGTATTACTTaGTCTTCTTCCTCAGGTTTG +
Preference number: 4 (lower is better)
Translates to: CPSTLDSKFFSLGIQSGFSSCIT*SSSSGL
Trigger: CAAACCTGAGGAAGAAGAGCAAGTAATACATGAAGA...AAAGCCAGACTGAATCCCCAAACTGAAGAATTTGGAGTCCAGTGTCGAAGGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR GCA 90 bp CATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAGCATCTGTCTCACTGTaGCTGCATTTCTGTAAGACA +
Preference number: 4 (lower is better)
Translates to: HLSKKSCTRWILHGVSCTASVSL*LHFCKT
Trigger: TGTCTTACAGAAATGCAGGCACAGTGAGACAGATGC...TGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR GCA 90 bp GTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATTTTCTTGGGGTGGTATTaGTGTTCTGTTCTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: VQEILHKVDFTWGIMHKIFLGWY*CSVLQQ
Trigger: CTGCTGCAGAACAGAACAGCAATACCACCCCAAGAA...AATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR GCA 90 bp TGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTCACCACTTGAATCACTaGCAGTGGCTTTTCCACACT +
Preference number: 4 (lower is better)
Translates to: CIHTSVQEILHKVDFTWGHHLNH*QWLFHT
Trigger: AGTGTGGAAAAGCCACTGGCAGTGATTCAAGTGGTG...ACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR GCA 90 bp AACACCCACACATATTCCCCAGCCTCAAAACTAAAGCAAGGTACACATTTACATAGCCTGAGCTGGTGGTaGAGGAAGAGTTGTATAAAC +
Preference number: 4 (lower is better)
Translates to: NTHTYSPASKLKQGTHLHSLSWW*RKSCIN
Trigger: GTTTATACAACTCTTCCTGCACCACCAGCTCAGGCT...ATGTAAATGTGTACCTTGCTTTAGTTTTGAGGCTGGGGAATATGTGTGGGTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536444.5
ENST00000544627.5
CDS-3UTR GCA 90 bp AATGAAAATGGGAGACTCCAATGCAATAACACCTACATAAGGAAAAACACACATTTTTGGGGATTGACCTaGCGAACAGCAGGAGCCTGC +
Preference number: 4 (lower is better)
Translates to: NENGRLQCNNTYIRKNTHFWGLT*RTAGAC
Trigger: GCAGGCTCCTGCTGTTCGGCAGGTCAATCCCCAAAA...ATGTGTGTTTTTCCTTATGTAGGTGTTATTGCATTGGAGTCTCCCATTTTCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000536444.5
ENST00000544627.5
CDS-3UTR GCA 90 bp AGAATCATGCCAGTTACACATCTCAAATCCTTTGATCTACTTACTTCGTACTTTCTGGGTGAGAGTACATaGCATGGGCAAGGGAAGTGC +
Preference number: 4 (lower is better)
Translates to: RIMPVTHLKSFDLLTSYFLGEST*HGQGKC
Trigger: GCACTTCCCTTGCCCATGGCATGTACTCTCACCCAG...AAAGTACGAAGTAAGTAGATCAAAGGATTTGAGATGTGTAACTGGCATGATTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536444.5
ENST00000544627.5
CDS-3UTR GCA 90 bp TTCTTCAGTTTGGGGATTCAGTCTGGCTTTCCTTGCTCAGCTTGCAGACAGCCTAATCTAGCTGACATATaGATGATCTCACATACTTAC +
Preference number: 4 (lower is better)
Translates to: FFSLGIQSGFPCSACRQPNLADI*MISHTY
Trigger: GTAAGTATGTGAGATCATGCATATGTCAGCTAGATT...AGGCTGTCTGCAAGCTGAGCAAGGAAAGCCAGACTGAATCCCCAAACTGAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR GCA 90 bp AGTGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGCCCACTTTGTCAGCCTaGAGGAAACTGAACATAGAC +
Preference number: 4 (lower is better)
Translates to: SVYTHLSKKSCTRWILHGPTLSA*RKLNID
Trigger: GTCTATGTTCAGTTTCCTGCAGGCTGACAAAGTGGG...CCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544627.5
CDS-3UTR CCA 90 bp ACATATCAACATTGCAACCACTGCAGGTCAAAACATATACATGCAGATATAGACCAGATCACCAGGGGCTaGATCACCAGAAACTGGTTC +
Preference number: 4 (lower is better)
Translates to: TYQHCNHCRSKHIHADIDQITRG*ITRNWF
Trigger: GAACCAGTTTCTGGTGATCCAGCCCCTGGTGATCTG...GTCTATATCTGCATGTATATGTTTTGACCTGCAGTGGTTGCAATGTTGATATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536444.5
CDS-3UTR CCA 90 bp AAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATTAAAACAGAGGCTGGATCAGTaGAAGCTGGTGCTCCAGAAG +
Preference number: 4 (lower is better)
Translates to: KKSCTRWILHGVSCTRLKQRLDQ*KLVLQK
Trigger: CTTCTGGAGCACCAGCTTCCACTGATCCAGCCTCTG...TTTTAATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp TCAGTTTGGGGATTCAGTCTGGCTTTCCTTGCTCAGCTTGCAGACAGCCTATTGATTTGTCTCATCGATTaGAAGGAGAGATGTTTTAGA +
Preference number: 4 (lower is better)
Translates to: SVWGFSLAFLAQLADSLLICLID*KERCFR
Trigger: TCTAAAACATCTCTCCTTCCAATCGATGAGACAAAT...CAATAGGCTGTCTGCAAGCTGAGCAAGGAAAGCCAGACTGAATCCCCAAACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR CCA 90 bp ACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAGCGTTTGGTTAACCTaGCTATCTTGGCCTGTAGTT +
Preference number: 4 (lower is better)
Translates to: TSVQEILHKVDFTWGIMHSVWLT*LSWPVV
Trigger: AACTACAGGCCAAGATAGCCAGGTTAACCAAACGCT...GTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp ACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACCTGCTTCAAAGCGTTTaGTTAACCTGGCTATCTTGG +
Preference number: 4 (lower is better)
Translates to: TSVQEILHKVDFTWGIMHLLQSV*LTWLSW
Trigger: CCAAGATAGCCAGGTTAACCAAACGCTTTGAAGCAG...GTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp CATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACACTGCTTCAAAGCGTTTaGTTAACCTGGCTATCTTGG +
Preference number: 4 (lower is better)
Translates to: HLSKKSCTRWILHGVSCTLLQSV*LTWLSW
Trigger: CCAAGATAGCCAGGTTAACCAAACGCTTTGAAGCAG...TGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp AGTGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGGAACCCGAAGTCACTaGAGTCTGCAATTTAGGTTG +
Preference number: 4 (lower is better)
Translates to: SVYTHLSKKSCTRWILHGGTRSH*SLQFRL
Trigger: CAACCTAAATTGCAGACTCCAGTGACTTCGGGTTCC...CCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp TGGTGGGCACAATCTAATCAGCTGTCAATGAATACAAAGCAGGCAGAAAAACATGGAACCCGAAGTCACTaGAGTCTGCAATTTAGGTTG +
Preference number: 4 (lower is better)
Translates to: WWAQSNQLSMNTKQAEKHGTRSH*SLQFRL
Trigger: CAACCTAAATTGCAGACTCCAGTGACTTCGGGTTCC...ATGTTTTTCTGCCTGCTTTGTATTCATTGACAGCTGATTAGATTGTGCCCACCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR CCA 90 bp AGTGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGAAAGAGATTGTAGGCTaGGGATTTCCACTAGGCACC +
Preference number: 4 (lower is better)
Translates to: SVYTHLSKKSCTRWILHGKEIVG*GFPLGT
Trigger: GGTGCCTAGTGGAAATCCCCAGCCTACAATCTCTTT...CCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp TGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATAATAGAGTGTGCTGTTaGAACAGCCTGCACAGCAAG +
Preference number: 4 (lower is better)
Translates to: CPRNLAQGGFYMGYHAQDNRVCC*NSLHSK
Trigger: CTTGCTGTGCAGGCTGTTCCAACAGCACACTCTATT...ATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp ACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACGTAGTAAGTGTATGGTaGTCTGAGATGGTCCACTTG +
Preference number: 4 (lower is better)
Translates to: TSVQEILHKVDFTWGIMHVVSVW*SEMVHL
Trigger: CAAGTGGACCATCTCAGACCACCATACACTTACTAC...GTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp TATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATGTACAGGGAGTCTTGTaGTCACCTGAGTTACTGGAC +
Preference number: 4 (lower is better)
Translates to: YTHICPRNLAQGGFYMGYVQGVL*SPELLD
Trigger: GTCCAGTAACTCAGGTGACCACAAGACTCCCTGTAC...ATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp AAATGTAGTGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACAAGGGAGCCTGAGCTaGTGGTGCAGGAAGAGTTGT +
Preference number: 4 (lower is better)
Translates to: KCSVYTHLSKKSCTRWILQGSLS*WCRKSC
Trigger: ACAACTCTTCCTGCACCACCAGCTCAGGCTCCCTTG...TAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACACTACATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp GAAACTAAAAAGGTAACCGTGGAGTGGAAACTGCTACTAGAAAGTCTGTTATCACTCAGTATGCACTTGTaGTGGTCGGTGATGCACTGT +
Preference number: 4 (lower is better)
Translates to: ETKKVTVEWKLLLESLLSLSMHL*WSVMHC
Trigger: ACAGTGCATCACCGACCACCACAAGTGCATACTGAG...TGATAACAGACTTTCTAGTAGCAGTTTCCACTCCACGGTTACCTTTTTAGTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536444.5
CDS-3UTR CCA 90 bp TATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATGGTAGCTATCAACAGTaGCACAGCTTCGATCCACCT +
Preference number: 4 (lower is better)
Translates to: YTHICPRNLAQGGFYMGYGSYQQ*HSFDPP
Trigger: AGGTGGATCGAAGCTGTGCCACTGTTGATAGCTACC...ATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp CTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGACTACCAGATACAAACTaGGTGAGAGTACATGCCATG +
Preference number: 4 (lower is better)
Translates to: LSKKSCTRWILHGVSCTRLPDTN*VRVHAM
Trigger: CATGGCATGTACTCTCACCCAGTTTGTATCTGGTAG...TCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp GGAACACCTCTCTGTGAGGCAAATGGTATCTCAACAAATACCGACTTTTCAAGGAAGGTAACCGTGGAGTaGAAACTGCTACTAGAAAGT +
Preference number: 4 (lower is better)
Translates to: GTPLCEANGISTNTDFSRKVTVE*KLLLES
Trigger: ACTTTCTAGTAGCAGTTTCCACTCCACGGTTACCTT...CCTTGAAAAGTCGGTATTTGTTGAGATACCATTTGCCTCACAGAGAGGTGTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536444.5
CDS-3UTR CCA 90 bp CATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAAATTTCAGGCTTGCTaGACAAAACCCCACTACAGG +
Preference number: 4 (lower is better)
Translates to: HLSKKSCTRWILHGVSCTKFQAC*TKPHYR
Trigger: CCTGTAGTGGGGTTTTGTCCAGCAAGCCTGAAATTT...TGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000536444.5
CDS-3UTR CCA 90 bp TGCCCTTCGACACTGGACTCCAAATTCTTCAGTTTGGGGATTCAGTCTGGCTTTATGATTTCCATCATCTaGGGTAAATCACAATTGACC +
Preference number: 4 (lower is better)
Translates to: CPSTLDSKFFSLGIQSGFMISII*GKSQLT
Trigger: GGTCAATTGTGATTTACCCCAGATGATGGAAATCAT...AAAGCCAGACTGAATCCCCAAACTGAAGAATTTGGAGTCCAGTGTCGAAGGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR CCA 90 bp TACACTGCAGAATGGCTAAATCTAGCTGACATATGCATGATCTCACATACTTACATCTTTCTCCTGTGCTaGATGCTTCCTGCCCTTCGA +
Preference number: 4 (lower is better)
Translates to: YTAEWLNLADICMISHTYIFLLC*MLPALR
Trigger: TCGAAGGGCAGGAAGCATCCAGCACAGGAGAAAGAT...GTAAGTATGTGAGATCATGCATATGTCAGCTAGATTTAGCCATTCTGCAGTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR TCA 90 bp GAAACTAAAAAGGTAACCGTGGAGTGGAAACTGCTACTAGAAAGTCTGTTATCACATGTTTTCCAAAGGTaGGGTTGGGTCCAAATCTCC +
Preference number: 4 (lower is better)
Translates to: ETKKVTVEWKLLLESLLSHVFQR*GWVQIS
Trigger: GGAGATTTGGACCCAACCTCACCTTTGGAAAACATG...TGATAACAGACTTTCTAGTAGCAGTTTCCACTCCACGGTTACCTTTTTAGTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536444.5
CDS-3UTR TCA 90 bp TGGTGGGCACAATCTAATCAGCTGTCAATGAATACAAAGCAGGCAGAAAAACATGGTACGATCAAAGGTTaGTTCAGAAGTCAGCTCATC +
Preference number: 4 (lower is better)
Translates to: WWAQSNQLSMNTKQAEKHGTIKG*FRSQLI
Trigger: GATGAGCTGACTTCTGAATCAACCTTTGATCGTACC...ATGTTTTTCTGCCTGCTTTGTATTCATTGACAGCTGATTAGATTGTGCCCACCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR TCA 90 bp GTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATGGCCTGTAGTTCAGTaGGAACTGTTTTATGCCTCT +
Preference number: 4 (lower is better)
Translates to: VYTHLSKKSCTRWILHGVWPVVQ*ELFYAS
Trigger: AGAGGCATAAAACAGTTCTCACTGAACTACAGGCCA...TACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR TCA 90 bp AGTGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGTGGCCTGTAGTTCAGTaGGAACTGTTTTATGCCTCT +
Preference number: 4 (lower is better)
Translates to: SVYTHLSKKSCTRWILHGWPVVQ*ELFYAS
Trigger: AGAGGCATAAAACAGTTCTCACTGAACTACAGGCCA...CCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR TCA 90 bp GTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATTCAACTGCTGGAGGAGTaGCAAGATTGGTTGAAGATA +
Preference number: 4 (lower is better)
Translates to: VQEILHKVDFTWGIMHKIQLLEE*QDWLKI
Trigger: TATCTTCAACCAATCTTGTCACTCCTCCAGCAGTTG...AATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR TCA 90 bp TGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTCAACTGCTGGAGGAGTaGCAAGATTGGTTGAAGATA +
Preference number: 4 (lower is better)
Translates to: CIHTSVQEILHKVDFTWGQLLEE*QDWLKI
Trigger: TATCTTCAACCAATCTTGTCACTCCTCCAGCAGTTG...ACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR TCA 90 bp GTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATTGTCTGCAATTTAGGTTaGCTACTGACAACTGCTGGA +
Preference number: 4 (lower is better)
Translates to: VQEILHKVDFTWGIMHKIVCNLG*LLTTAG
Trigger: TCCAGCAGTTGTCAGTAGTCAACCTAAATTGCAGAC...AATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR TCA 90 bp AGTGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGTTTCCACTAGGCACCTaGGTAGTAGCAACTACAGTA +
Preference number: 4 (lower is better)
Translates to: SVYTHLSKKSCTRWILHGFPLGT*VVATTV
Trigger: TACTGTAGTTGCTACTACTCAGGTGCCTAGTGGAAA...CCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR TCA 90 bp TGGTGGGCACAATCTAATCAGCTGTCAATGAATACAAAGCAGGCAGAAAAACATACATTGCCAGATGGTTaGTTAGTCACCAAAGTCCCT +
Preference number: 4 (lower is better)
Translates to: WWAQSNQLSMNTKQAEKHTLPDG*LVTKVP
Trigger: AGGGACTTTGGTGACTAATCAACCATCTGGCAATGT...ATGTTTTTCTGCCTGCTTTGTATTCATTGACAGCTGATTAGATTGTGCCCACCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR TCA 90 bp TGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTACATTGCCAGATGGTTaGTTAGTCACCAAAGTCCCT +
Preference number: 4 (lower is better)
Translates to: CIHTSVQEILHKVDFTWGTLPDG*LVTKVP
Trigger: AGGGACTTTGGTGACTAATCAACCATCTGGCAATGT...ACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR TCA 90 bp GGAACACCTCTCTGTGAGGCAAATGGTATCTCAACAAATACCGACTTTTCAAGGCAGCTGCTTTCTTACTaGCAGAAGCATCTATTGTTT +
Preference number: 4 (lower is better)
Translates to: GTPLCEANGISTNTDFSRQLLSY*QKHLLF
Trigger: AAACAATAGATGCTTCTGTCAGTAAGAAAGCAGCTG...CCTTGAAAAGTCGGTATTTGTTGAGATACCATTTGCCTCACAGAGAGGTGTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536444.5
CDS-3UTR TCA 90 bp AGTGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGATCAATGACACCACTTaGATCACTGCCAGTGGCTTT +
Preference number: 4 (lower is better)
Translates to: SVYTHLSKKSCTRWILHGINDTT*ITASGF
Trigger: AAAGCCACTGGCAGTGATTCAAGTGGTGTCATTGAT...CCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR TCA 90 bp CAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATTAAAAAGTGTATGGTGGTCTaGGATGGTCCACTTGTTGGC +
Preference number: 4 (lower is better)
Translates to: QEILHKVDFTWGIMHKIKKCMVV*DGPLVG
Trigger: GCCAACAAGTGGACCATCTCAGACCACCATACACTT...TTTAATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR TCA 90 bp AAATGTAGTGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTATTCAAGTGTGGCTTCTaGGGCAGAGATGTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: KCSVYTHLSKKSCTRWILFKCGF*GRDVLA
Trigger: TGCCAGCACATCTCTGCCTCAGAAGCCACACTTGAA...TAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACACTACATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR TCA 90 bp AATGAAAATGGGAGACTCCAATGCAATAACACCTACATAAGGAAAAACACACATTTCAAGTGTGGCTTCTaGGGCAGAGATGTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: NENGRLQCNNTYIRKNTHFKCGF*GRDVLA
Trigger: TGCCAGCACATCTCTGCCTCAGAAGCCACACTTGAA...ATGTGTGTTTTTCCTTATGTAGGTGTTATTGCATTGGAGTCTCCCATTTTCATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536444.5
ENST00000544627.5
CDS-3UTR TCA 90 bp CAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATTAAAAATCTTTTTCCATTGTaGGGGCACAGTGGCACTGGG +
Preference number: 4 (lower is better)
Translates to: QEILHKVDFTWGIMHKIKNLFPL*GHSGTG
Trigger: CCCAGTGCCACTGTGCCCTCACAATGGAAAAAGATT...TTTAATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR TCA 90 bp AACAAATGTAGTGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTCAGATACAAACTGGGTaGGAGTACATGCCATGGGCA +
Preference number: 4 (lower is better)
Translates to: NKCSVYTHLSKKSCTRWIQIQTG*EYMPWA
Trigger: TGCCCATGGCATGTACTCTCACCCAGTTTGTATCTG...AATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACACTACATTTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR TCA 90 bp AGTGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGAGAGATCACATCTGTTaGCTGAGGATCACAGAAAGG +
Preference number: 4 (lower is better)
Translates to: SVYTHLSKKSCTRWILHGRDHIC*LRITER
Trigger: CCTTTCTGTGATCCTCAGTCAACAGATGTGATCTCT...CCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR TCA 90 bp CAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATTAAAGGGAACACCTCTCTGTaGGGCAAATGGTATCTCAAC +
Preference number: 4 (lower is better)
Translates to: QEILHKVDFTWGIMHKIKGNTSL*GKWYLN
Trigger: GTTGAGATACCATTTGCCTCACAGAGAGGTGTTCCC...TTTAATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536444.5
CDS-3UTR TCA 90 bp CATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACATCCCCAAAAGGTGTTTaGTTGCCCAGTTACCTTATT +
Preference number: 4 (lower is better)
Translates to: HLSKKSCTRWILHGVSCTSPKGV*LPSYLI
Trigger: AATAAGGTAACTGGGCAATCAAACACCTTTTGGGGA...TGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000536444.5
CDS-3UTR GCA 90 bp CTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATTTGACCTTGTACACTaGTTCAAGTTGCTGACGATC +
Preference number: 4 (lower is better)
Translates to: LSKKSCTRWILHGVSCTRFDLVH*FKLLTI
Trigger: GATCGTCAGCAACTTGAAGCAGTGTACAAGGTCAAA...TCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR GCA 90 bp GTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATTACTGCAACAGGTACATaGAAAATCACTGGCAAAGGC +
Preference number: 4 (lower is better)
Translates to: VQEILHKVDFTWGIMHKITATGT*KITGKG
Trigger: GCCTTTGCCAGTGATTTTGCATGTACCTGTTGCAGT...AATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR GCA 90 bp TGGTGGGCACAATCTAATCAGCTGTCAATGAATACAAAGCAGGCAGAAAAACATACTGCAACAGGTACATaGAAAATCACTGGCAAAGGC +
Preference number: 4 (lower is better)
Translates to: WWAQSNQLSMNTKQAEKHTATGT*KITGKG
Trigger: GCCTTTGCCAGTGATTTTGCATGTACCTGTTGCAGT...ATGTTTTTCTGCCTGCTTTGTATTCATTGACAGCTGATTAGATTGTGCCCACCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR GCA 90 bp AGTGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGTTGTACAATAGAGTGTaGTGTTGGAACAGCCTGCAC +
Preference number: 4 (lower is better)
Translates to: SVYTHLSKKSCTRWILHGLYNRV*CWNSLH
Trigger: GTGCAGGCTGTTCCAACAGCACACTCTATTGTACAA...CCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR GCA 90 bp TGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTTTGTACAATAGAGTGTaGTGTTGGAACAGCCTGCAC +
Preference number: 4 (lower is better)
Translates to: CIHTSVQEILHKVDFTWGLYNRV*CWNSLH
Trigger: GTGCAGGCTGTTCCAACAGCACACTCTATTGTACAA...ACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR GCA 90 bp CACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCATTCCACACTGTGATGTaGTATCAGCTGCTTTCTTAC +
Preference number: 4 (lower is better)
Translates to: HICPRNLAQGGFYMGYHAFHTVM*YQLLSY
Trigger: GTAAGAAAGCAGCTGATAGCACATCACAGTGTGGAA...TGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR GCA 90 bp AAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATTAAAAAACCACCTGGTGGTTTaGAGGAGCTCTTGGTACAGG +
Preference number: 4 (lower is better)
Translates to: KKSCTRWILHGVSCTRLKNHLVV*RSSWYR
Trigger: CCTGTACCAAGAGCTCCTGCAAACCACCAGGTGGTT...TTTTAATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR GCA 90 bp TATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATAGCCTGAGCTGGTGGTaGAGGAAGAGTTGTATAAAC +
Preference number: 4 (lower is better)
Translates to: YTHICPRNLAQGGFYMGYSLSWW*RKSCIN
Trigger: GTTTATACAACTCTTCCTGCACCACCAGCTCAGGCT...ATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR GCA 90 bp ACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACTCCATGACAGTACTATaGCATTTTGACTCTGAACGC +
Preference number: 4 (lower is better)
Translates to: TSVQEILHKVDFTWGIMHSMTVL*HFDSER
Trigger: GCGTTCAGAGTCAAAATGGCATAGTACTGTCATGGA...GTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR GCA 90 bp CTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATCCATGACAGTACTATaGCATTTTGACTCTGAACGC +
Preference number: 4 (lower is better)
Translates to: LSKKSCTRWILHGVSCTRSMTVL*HFDSER
Trigger: GCGTTCAGAGTCAAAATGGCATAGTACTGTCATGGA...TCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR GCA 90 bp CATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACATCCATGACAGTACTATaGCATTTTGACTCTGAACGC +
Preference number: 4 (lower is better)
Translates to: HLSKKSCTRWILHGVSCTSMTVL*HFDSER
Trigger: GCGTTCAGAGTCAAAATGGCATAGTACTGTCATGGA...TGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp TGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTTGGATCACCAGAAACTaGTTCAGCAGGCAGTTTAGA +
Preference number: 4 (lower is better)
Translates to: CIHTSVQEILHKVDFTWGWITRN*FSRQFR
Trigger: TCTAAACTGCCTGCTGAACCAGTTTCTGGTGATCCA...ACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp AATGAAAATGGGAGACTCCAATGCAATAACACCTACATAAGGAAAAACACACATCAGATCACCAGGGGCTaGATCACCAGAAACTGGTTC +
Preference number: 4 (lower is better)
Translates to: NENGRLQCNNTYIRKNTHQITRG*ITRNWF
Trigger: GAACCAGTTTCTGGTGATCCAGCCCCTGGTGATCTG...ATGTGTGTTTTTCCTTATGTAGGTGTTATTGCATTGGAGTCTCCCATTTTCATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000536444.5
ENST00000544627.5
CDS-3UTR CCA 90 bp TATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCACAATCACCAGAAATaGGTTCAACAGGGACCGGTT +
Preference number: 4 (lower is better)
Translates to: YTHICPRNLAQGGFYMGYHNHQK*VQQGPV
Trigger: AACCGGTCCCTGTTGAACCCATTTCTGGTGATTGTG...ATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp TTTCACCTAATTAACAACTCAGGAGACCAGACAAAAGAAACAACAAATAGATCCCAGATCATCAGAGGCTaGATCAGTGGAAGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: FHLINNSGDQTKETTNRSQIIRG*ISGSWC
Trigger: GCACCAGCTTCCACTGATCCAGCCTCTGATGATCTG...GGATCTATTTGTTGTTTCTTTTGTCTGGTCTCCTGAGTTGTTAATTAGGTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536444.5
ENST00000544627.5
CDS-3UTR CCA 90 bp TGCCCTTCGACACTGGACTCCAAATTCTTCAGTTTGGGGATTCAGTCTGGCTTTTCATTCTTTTCACCTTaGTCAATTTCCATACTGCTA +
Preference number: 4 (lower is better)
Translates to: CPSTLDSKFFSLGIQSGFSFFSP*SISILL
Trigger: TAGCAGTATGGAAATTGACCAAGGTGAAAAGAATGA...AAAGCCAGACTGAATCCCCAAACTGAAGAATTTGGAGTCCAGTGTCGAAGGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR CCA 90 bp TGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTAGCGTTTGGTTAACCTaGCTATCTTGGCCTGTAGTT +
Preference number: 4 (lower is better)
Translates to: CIHTSVQEILHKVDFTWGSVWLT*LSWPVV
Trigger: AACTACAGGCCAAGATAGCCAGGTTAACCAAACGCT...ACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp AACACCCACACATATTCCCCAGCCTCAAAACTAAAGCAAGGTACACATTTACATGTGATACTGGTGGGTTaGGTGGATGTTCATGTCTTT +
Preference number: 4 (lower is better)
Translates to: NTHTYSPASKLKQGTHLHVILVG*VDVHVF
Trigger: AAAGACATGAACATCCACCCAACCCACCAGTATCAC...ATGTAAATGTGTACCTTGCTTTAGTTTTGAGGCTGGGGAATATGTGTGGGTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536444.5
ENST00000544627.5
CDS-3UTR CCA 90 bp AGTGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGACTACTGACAACTGCTaGAGGAGTGACAAGATTGGT +
Preference number: 4 (lower is better)
Translates to: SVYTHLSKKSCTRWILHGTTDNC*RSDKIG
Trigger: ACCAATCTTGTCACTCCTCCAGCAGTTGTCAGTAGT...CCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp GTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTAACTACTGACAACTGCTaGAGGAGTGACAAGATTGGT +
Preference number: 4 (lower is better)
Translates to: VYTHLSKKSCTRWILHGVTTDNC*RSDKIG
Trigger: ACCAATCTTGTCACTCCTCCAGCAGTTGTCAGTAGT...TACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp TATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATAAAGAGATTGTAGGCTaGGGATTTCCACTAGGCACC +
Preference number: 4 (lower is better)
Translates to: YTHICPRNLAQGGFYMGYKEIVG*GFPLGT
Trigger: GGTGCCTAGTGGAAATCCCCAGCCTACAATCTCTTT...ATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp GTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATTACCACTCACTGTAGGTaGGCTTTGCACAGAAATGAA +
Preference number: 4 (lower is better)
Translates to: VQEILHKVDFTWGIMHKITTHCR*ALHRNE
Trigger: TTCATTTCTGTGCAAAGCCCACCTACAGTGAGTGGT...AATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp TGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATACCACTCACTGTAGGTaGGCTTTGCACAGAAATGAA +
Preference number: 4 (lower is better)
Translates to: CPRNLAQGGFYMGYHAQDTTHCR*ALHRNE
Trigger: TTCATTTCTGTGCAAAGCCCACCTACAGTGAGTGGT...ATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp CATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAGGATGGCAAGGATACTaGATTTTTGGTAAGACCACT +
Preference number: 4 (lower is better)
Translates to: HLSKKSCTRWILHGVSCTGWQGY*IFGKTT
Trigger: AGTGGTCTTACCAAAAATCCAGTATCCTTGCCATCC...TGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp CATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAGGGATTTGGCAAGGATaGCAAGGATACTGGATTTTT +
Preference number: 4 (lower is better)
Translates to: HLSKKSCTRWILHGVSCTGIWQG*QGYWIF
Trigger: AAAAATCCAGTATCCTTGCCATCCTTGCCAAATCCC...TGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp TACACTGCAGAATGGCTAAATCTAGCTGACATATGCATGATCTCACATACTTACAATAGAGTGTGCTGTTaGAACAGCCTGCACAGCAAG +
Preference number: 4 (lower is better)
Translates to: YTAEWLNLADICMISHTYNRVCC*NSLHSK
Trigger: CTTGCTGTGCAGGCTGTTCCAACAGCACACTCTATT...GTAAGTATGTGAGATCATGCATATGTCAGCTAGATTTAGCCATTCTGCAGTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR CCA 90 bp AAATGTAGTGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACTGATGGGCCCACTGTaGGTAAAGAAGTCCTTGTGG +
Preference number: 4 (lower is better)
Translates to: KCSVYTHLSKKSCTRWILLMGPL*VKKSLW
Trigger: CCACAAGGACTTCTTTACCCACAGTGGGCCCATCAG...TAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACACTACATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp ACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACCTGGTTTTCAATTCTTaGGGTGGTATTGCTGTTCTG +
Preference number: 4 (lower is better)
Translates to: TSVQEILHKVDFTWGIMHLVFNS*GGIAVL
Trigger: CAGAACAGCAATACCACCCCAAGAATTGAAAACCAG...GTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp GTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATTGAATCACTGCCAGTaGCTTTTCCACACTGTGATG +
Preference number: 4 (lower is better)
Translates to: VYTHLSKKSCTRWILHGVLNHCQ*LFHTVM
Trigger: CATCACAGTGTGGAAAAGCCACTGGCAGTGATTCAA...TACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp ACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACGCTGAGAAGAACTCATaGTTGATACAGGAGTGTGAT +
Preference number: 4 (lower is better)
Translates to: TSVQEILHKVDFTWGIMHAEKNS*LIQECD
Trigger: ATCACACTCCTGTATCAACCATGAGTTCTTCTCAGC...GTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp TTTCACCTAATTAACAACTCAGGAGACCAGACAAAAGAAACAACAAATAGATCCTATGGTGGTCTGAGATaGTCCACTTGTTGGCACCCC +
Preference number: 4 (lower is better)
Translates to: FHLINNSGDQTKETTNRSYGGLR*STCWHP
Trigger: GGGGTGCCAACAAGTGGACCATCTCAGACCACCATA...GGATCTATTTGTTGTTTCTTTTGTCTGGTCTCCTGAGTTGTTAATTAGGTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536444.5
ENST00000544627.5
CDS-3UTR CCA 90 bp AACAAATGTAGTGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTGTACAGGGAGTCTTGTaGTCACCTGAGTTACTGGAC +
Preference number: 4 (lower is better)
Translates to: NKCSVYTHLSKKSCTRWIVQGVL*SPELLD
Trigger: GTCCAGTAACTCAGGTGACCACAAGACTCCCTGTAC...AATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACACTACATTTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp AAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATTAAAAGGGAGCCTGAGCTGGTaGTGCAGGAAGAGTTGTATA +
Preference number: 4 (lower is better)
Translates to: KKSCTRWILHGVSCTRLKGSLSW*CRKSCI
Trigger: TATACAACTCTTCCTGCACCACCAGCTCAGGCTCCC...TTTTAATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp TTTCACCTAATTAACAACTCAGGAGACCAGACAAAAGAAACAACAAATAGATCCAGGGCACAGTGGCACTaGGTTCCTCATGGTAAGCAT +
Preference number: 4 (lower is better)
Translates to: FHLINNSGDQTKETTNRSRAQWH*VPHGKH
Trigger: ATGCTTACCATGAGGAACCCAGTGCCACTGTGCCCT...GGATCTATTTGTTGTTTCTTTTGTCTGGTCTCCTGAGTTGTTAATTAGGTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536444.5
ENST00000544627.5
CDS-3UTR CCA 90 bp AAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATTAAAAAGGGCACAGTGGCACTaGGTTCCTCATGGTAAGCAT +
Preference number: 4 (lower is better)
Translates to: KKSCTRWILHGVSCTRLKRAQWH*VPHGKH
Trigger: ATGCTTACCATGAGGAACCCAGTGCCACTGTGCCCT...TTTTAATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp AACACCCACACATATTCCCCAGCCTCAAAACTAAAGCAAGGTACACATTTACATCTACCAGATACAAACTaGGTGAGAGTACATGCCATG +
Preference number: 4 (lower is better)
Translates to: NTHTYSPASKLKQGTHLHLPDTN*VRVHAM
Trigger: CATGGCATGTACTCTCACCCAGTTTGTATCTGGTAG...ATGTAAATGTGTACCTTGCTTTAGTTTTGAGGCTGGGGAATATGTGTGGGTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536444.5
ENST00000544627.5
CDS-3UTR CCA 90 bp GTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATTCTACCAGATACAAACTaGGTGAGAGTACATGCCATG +
Preference number: 4 (lower is better)
Translates to: VQEILHKVDFTWGIMHKILPDTN*VRVHAM
Trigger: CATGGCATGTACTCTCACCCAGTTTGTATCTGGTAG...AATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp GGAACACCTCTCTGTGAGGCAAATGGTATCTCAACAAATACCGACTTTTCAAGGCTGTCTTCCACAATATaGTTTTCTCTTGGTCCACTT +
Preference number: 4 (lower is better)
Translates to: GTPLCEANGISTNTDFSRLSSTI*FSLGPL
Trigger: AAGTGGACCAAGAGAAAACCATATTGTGGAAGACAG...CCTTGAAAAGTCGGTATTTGTTGAGATACCATTTGCCTCACAGAGAGGTGTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536444.5
CDS-3UTR CCA 90 bp TTTCACCTAATTAACAACTCAGGAGACCAGACAAAAGAAACAACAAATAGATCCCCTATTCCTCCCCATTaGCTGGCTCAAGGGGATGAA +
Preference number: 4 (lower is better)
Translates to: FHLINNSGDQTKETTNRSPIPPH*LAQGDE
Trigger: TTCATCCCCTTGAGCCAGCCAATGGGGAGGAATAGG...GGATCTATTTGTTGTTTCTTTTGTCTGGTCTCCTGAGTTGTTAATTAGGTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000536444.5
CDS-3UTR CCA 90 bp TGCCCTTCGACACTGGACTCCAAATTCTTCAGTTTGGGGATTCAGTCTGGCTTTATTACTTTCTACTTCTaGAGAGCACGTTTCATTTTG +
Preference number: 4 (lower is better)
Translates to: CPSTLDSKFFSLGIQSGFITFYF*RARFIL
Trigger: CAAAATGAAACGTGCTCTCCAGAAGTAGAAAGTAAT...AAAGCCAGACTGAATCCCCAAACTGAAGAATTTGGAGTCCAGTGTCGAAGGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR TCA 90 bp AACAAATGTAGTGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTGTATTCACAGGAGTTTaGAAGGATGGTGGTGCACTC +
Preference number: 4 (lower is better)
Translates to: NKCSVYTHLSKKSCTRWIVFTGV*KDGGAL
Trigger: GAGTGCACCACCATCCTTTCAAACTCCTGTGAATAC...AATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACACTACATTTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR TCA 90 bp CATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGTGACAAGATTGGTTaGAGATACTGTATTCACAGG +
Preference number: 4 (lower is better)
Translates to: HLSKKSCTRWILHGVSCTSDKIG*RYCIHR
Trigger: CCTGTGAATACAGTATCTTCAACCAATCTTGTCACT...TGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR TCA 90 bp TACACTGCAGAATGGCTAAATCTAGCTGACATATGCATGATCTCACATACTTACGTCTGCAATTTAGGTTaGCTACTGACAACTGCTGGA +
Preference number: 4 (lower is better)
Translates to: YTAEWLNLADICMISHTYVCNLG*LLTTAG
Trigger: TCCAGCAGTTGTCAGTAGTCAACCTAAATTGCAGAC...GTAAGTATGTGAGATCATGCATATGTCAGCTAGATTTAGCCATTCTGCAGTGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR TCA 90 bp AGTGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGGCTTTGCACAGAAATaGATTCAACATTGCCAGATG +
Preference number: 4 (lower is better)
Translates to: SVYTHLSKKSCTRWILHGGFAQK*IQHCQM
Trigger: CATCTGGCAATGTTGAATTCATTTCTGTGCAAAGCC...CCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR TCA 90 bp TGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTGGCTTTGCACAGAAATaGATTCAACATTGCCAGATG +
Preference number: 4 (lower is better)
Translates to: CIHTSVQEILHKVDFTWGGFAQK*IQHCQM
Trigger: CATCTGGCAATGTTGAATTCATTTCTGTGCAAAGCC...ACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR TCA 90 bp TGGTGGGCACAATCTAATCAGCTGTCAATGAATACAAAGCAGGCAGAAAAACATGGCTTTGCACAGAAATaGATTCAACATTGCCAGATG +
Preference number: 4 (lower is better)
Translates to: WWAQSNQLSMNTKQAEKHGFAQK*IQHCQM
Trigger: CATCTGGCAATGTTGAATTCATTTCTGTGCAAAGCC...ATGTTTTTCTGCCTGCTTTGTATTCATTGACAGCTGATTAGATTGTGCCCACCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR TCA 90 bp AAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATTAAAAGGTCGTGACACAGGCTaGGAAGAACTCATGGTTGAT +
Preference number: 4 (lower is better)
Translates to: KKSCTRWILHGVSCTRLKGRDTG*EELMVD
Trigger: ATCAACCATGAGTTCTTCTCAGCCTGTGTCACGACC...TTTTAATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR TCA 90 bp GTGATAAAACAACAAAATCTTAGGATGTTGAGGATACTGAATTGGCCCAAGAAAAAGTGTATGGTGGTCTaGGATGGTCCACTTGTTGGC +
Preference number: 4 (lower is better)
Translates to: VIKQQNLRMLRILNWPKKKCMVV*DGPLVG
Trigger: GCCAACAAGTGGACCATCTCAGACCACCATACACTT...TTTCTTGGGCCAATTCAGTATCCTCAACATCCTAAGATTTTGTTGTTTTATCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000536444.5
CDS-3UTR TCA 90 bp AATGAAAATGGGAGACTCCAATGCAATAACACCTACATAAGGAAAAACACACATAAGTGTATGGTGGTCTaGGATGGTCCACTTGTTGGC +
Preference number: 4 (lower is better)
Translates to: NENGRLQCNNTYIRKNTHKCMVV*DGPLVG
Trigger: GCCAACAAGTGGACCATCTCAGACCACCATACACTT...ATGTGTGTTTTTCCTTATGTAGGTGTTATTGCATTGGAGTCTCCCATTTTCATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536444.5
ENST00000544627.5
CDS-3UTR TCA 90 bp AACAAATGTAGTGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTAGTCTTGTGGTCACCTaGGTTACTGGACGATGTGTT +
Preference number: 4 (lower is better)
Translates to: NKCSVYTHLSKKSCTRWISLVVT*VTGRCV
Trigger: AACACATCGTCCAGTAACTCAGGTGACCACAAGACT...AATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACACTACATTTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR TCA 90 bp GTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTAACATATGTGGTTGTTTaGGGCACTCGAACTGTAACA +
Preference number: 4 (lower is better)
Translates to: VYTHLSKKSCTRWILHGVTYVVV*GTRTVT
Trigger: TGTTACAGTTCGAGTGCCTCAAACAACCACATATGT...TACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR TCA 90 bp AGAATCATGCCAGTTACACATCTCAAATCCTTTGATCTACTTACTTCGTACTTTGCAAGGGAAGTGCCTTaGCTTCCCCAATCTTTTTCC +
Preference number: 4 (lower is better)
Translates to: RIMPVTHLKSFDLLTSYFAREVP*LPQSFS
Trigger: GGAAAAAGATTGGGGAAGTCAAGGCACTTCCCTTGC...AAAGTACGAAGTAAGTAGATCAAAGGATTTGAGATGTGTAACTGGCATGATTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536444.5
ENST00000544627.5
CDS-3UTR TCA 90 bp AACAAATGTAGTGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTATCACATCTGTTGACTaGGGATCACAGAAAGGCCCA +
Preference number: 4 (lower is better)
Translates to: NKCSVYTHLSKKSCTRWIITSVD*GSQKGP
Trigger: TGGGCCTTTCTGTGATCCTCAGTCAACAGATGTGAT...AATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACACTACATTTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR TCA 90 bp TTTCACCTAATTAACAACTCAGGAGACCAGACAAAAGAAACAACAAATAGATCCGACAGAAGAATTGCTTaGACCCAGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: FHLINNSGDQTKETTNRSDRRIA*TQEAEV
Trigger: AACCTCTGCCTCCTGGGTTCAAGCAATTCTTCTGTC...GGATCTATTTGTTGTTTCTTTTGTCTGGTCTCCTGAGTTGTTAATTAGGTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536444.5
CDS-3UTR TCA 90 bp TGGTGGGCACAATCTAATCAGCTGTCAATGAATACAAAGCAGGCAGAAAAACATAACAGTGGTTACCTTTaGTGGAAAGGAAAAGGGATG +
Preference number: 4 (lower is better)
Translates to: WWAQSNQLSMNTKQAEKHNSGYL*WKGKGM
Trigger: CATCCCTTTTCCTTTCCATCAAAGGTAACCACTGTT...ATGTTTTTCTGCCTGCTTTGTATTCATTGACAGCTGATTAGATTGTGCCCACCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR GCA 90 bp AGTGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGTTTGACCTTGTACACTaGTTCAAGTTGCTGACGATC +
Preference number: 4 (lower is better)
Translates to: SVYTHLSKKSCTRWILHGFDLVH*FKLLTI
Trigger: GATCGTCAGCAACTTGAAGCAGTGTACAAGGTCAAA...CCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR GCA 90 bp AAATGTAGTGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTAATCAGTGGAAGCTGGTaGTCCAGAAGCCAGATCAAC +
Preference number: 4 (lower is better)
Translates to: KCSVYTHLSKKSCTRWILISGSW*SRSQIN
Trigger: GTTGATCTGGCTTCTGGAGCACCAGCTTCCACTGAT...TAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACACTACATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR GCA 90 bp ACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACTTCATCCTCAGAAGGTaGAAGCTTTTCCAAAATAGG +
Preference number: 4 (lower is better)
Translates to: TSVQEILHKVDFTWGIMHFILRR*KLFQNR
Trigger: CCTATTTTGGAAAAGCTTGCACCTTCTGAGGATGAA...GTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR GCA 90 bp CACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCATCAAATACAGCACACTaGAGCGCACACAATTTTTCT +
Preference number: 4 (lower is better)
Translates to: HICPRNLAQGGFYMGYHASNTAH*SAHNFS
Trigger: AGAAAAATTGTGTGCGCTGCAGTGTGCTGTATTTGA...TGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR GCA 90 bp GTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATTTTGACTACTGACAACTaGTGGAGGAGTGACAAGATT +
Preference number: 4 (lower is better)
Translates to: VQEILHKVDFTWGIMHKILTTDN*WRSDKI
Trigger: AATCTTGTCACTCCTCCAGCAGTTGTCAGTAGTCAA...AATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR GCA 90 bp GTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATTGACTACTGACAACTaGTGGAGGAGTGACAAGATT +
Preference number: 4 (lower is better)
Translates to: VYTHLSKKSCTRWILHGVLTTDN*WRSDKI
Trigger: AATCTTGTCACTCCTCCAGCAGTTGTCAGTAGTCAA...TACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR GCA 90 bp ACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACACTGTAGGTGGGCTTTaGACAGAAATGAATTCAACA +
Preference number: 4 (lower is better)
Translates to: TSVQEILHKVDFTWGIMHTVGGL*TEMNST
Trigger: TGTTGAATTCATTTCTGTGCAAAGCCCACCTACAGT...GTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR GCA 90 bp TATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATTTGTACAATAGAGTGTaGTGTTGGAACAGCCTGCAC +
Preference number: 4 (lower is better)
Translates to: YTHICPRNLAQGGFYMGYLYNRV*CWNSLH
Trigger: GTGCAGGCTGTTCCAACAGCACACTCTATTGTACAA...ATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR GCA 90 bp CTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGAATTGCTGTTCTGTTCTaGAGCAGACGAAGTACTAAA +
Preference number: 4 (lower is better)
Translates to: LSKKSCTRWILHGVSCTRIAVLF*SRRSTK
Trigger: TTTAGTACTTCGTCTGCTGCAGAACAGAACAGCAAT...TCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR GCA 90 bp ACATATCAACATTGCAACCACTGCAGGTCAAAACATATACATGCAGATATAGACTTCTTGGGGTGGTATTaGTGTTCTGTTCTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: TYQHCNHCRSKHIHADIDFLGWY*CSVLQQ
Trigger: CTGCTGCAGAACAGAACAGCAATACCACCCCAAGAA...GTCTATATCTGCATGTATATGTTTTGACCTGCAGTGGTTGCAATGTTGATATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536444.5
CDS-3UTR GCA 90 bp AACAAATGTAGTGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTCACCACTTGAATCACTaGCAGTGGCTTTTCCACACT +
Preference number: 4 (lower is better)
Translates to: NKCSVYTHLSKKSCTRWIHHLNH*QWLFHT
Trigger: AGTGTGGAAAAGCCACTGGCAGTGATTCAAGTGGTG...AATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACACTACATTTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR GCA 90 bp AATGAAAATGGGAGACTCCAATGCAATAACACCTACATAAGGAAAAACACACATTGGTTGAAGAGGCGGTaGTGGTTGTATGGGTTGCAA +
Preference number: 4 (lower is better)
Translates to: NENGRLQCNNTYIRKNTHWLKRR*WLYGLQ
Trigger: TTGCAACCCATACAACCAGCACCGCCTCTTCAACCA...ATGTGTGTTTTTCCTTATGTAGGTGTTATTGCATTGGAGTCTCCCATTTTCATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536444.5
ENST00000544627.5
CDS-3UTR GCA 90 bp CACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACTGCAAAGTAGTATTTaGTACCAGATACAAACTGGG +
Preference number: 4 (lower is better)
Translates to: HICPRNLAQGGFYMGYHALQSSI*YQIQTG
Trigger: CCCAGTTTGTATCTGGTAGCAAATACTACTTTGCAG...TGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR GCA 90 bp TGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATATCCTTGGCTCGTACTaGAAAGTAGTATTTGCTACC +
Preference number: 4 (lower is better)
Translates to: CPRNLAQGGFYMGYHAQDILGSY*KVVFAT
Trigger: GGTAGCAAATACTACTTTGCAGTACGAGCCAAGGAT...ATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR GCA 90 bp ACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACTCTCCCCTAAATAATTaGGATTTCTCCCTGTACCTT +
Preference number: 4 (lower is better)
Translates to: TSVQEILHKVDFTWGIMHSPLNN*DFSLYL
Trigger: AAGGTACAGGGAGAAATCGCAATTATTTAGGGGAGA...GTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000536444.5
CDS-3UTR GCA 90 bp GTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATTTCCTACATTGCAGGTTaGAGTATCAGGTTTCCAGAA +
Preference number: 4 (lower is better)
Translates to: VQEILHKVDFTWGIMHKISYIAG*SIRFPE
Trigger: TTCTGGAAACCTGATACTGCAACCTGCAATGTAGGA...AATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536444.5
CDS-3UTR GCA 90 bp CTTCAAAACCCTAATAAAAATAGGGCCACTTGCTGGAGCCCAGTTTGTATTAGAGGAATTAGACAAGTCTaGCACACTAACAAACGCTTC +
Preference number: 4 (lower is better)
Translates to: LQNPNKNRATCWSPVCIRGIRQV*HTNKRF
Trigger: GAAGCGTTTGTTAGTGTGGCAGACTTGTCTAATTCC...TCTAATACAAACTGGGCTCCAGCAAGTGGCCCTATTTTTATTAGGGTTTTGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536444.5
CDS-3UTR GCA 90 bp GTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATTTACTGCAACAAACAATaGAGCTACACAGGACACAGA +
Preference number: 4 (lower is better)
Translates to: VQEILHKVDFTWGIMHKIYCNKQ*SYTGHR
Trigger: TCTGTGTCCTGTGTAGCTGCATTGTTTGTTGCAGTA...AATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544627.5
CDS-3UTR CCA 90 bp GGAACACCTCTCTGTGAGGCAAATGGTATCTCAACAAATACCGACTTTTCAAGGAGGCAGTTTAGAGACTaGTTCTGGAGTTATATTATG +
Preference number: 4 (lower is better)
Translates to: GTPLCEANGISTNTDFSRRQFRD*FWSYIM
Trigger: CATAATATAACTCCAGAACCAGTCTCTAAACTGCCT...CCTTGAAAAGTCGGTATTTGTTGAGATACCATTTGCCTCACAGAGAGGTGTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536444.5
CDS-3UTR CCA 90 bp CAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATTAAACACAATCACCAGAAATaGGTTCAACAGGGACCGGTT +
Preference number: 4 (lower is better)
Translates to: QEILHKVDFTWGIMHKIKHNHQK*VQQGPV
Trigger: AACCGGTCCCTGTTGAACCCATTTCTGGTGATTGTG...TTTAATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp CACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCAGTCAATTTCAGGAACTaGTTCACAAACTGGTACAGA +
Preference number: 4 (lower is better)
Translates to: HICPRNLAQGGFYMGYHAVNFRN*FTNWYR
Trigger: TCTGTACCAGTTTGTGAACCAGTTCCTGAAATTGAC...TGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp ACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACCAGAAAGGCTTCTTTTaGCAAACTCTCACTACTTTC +
Preference number: 4 (lower is better)
Translates to: TSVQEILHKVDFTWGIMHQKGFF*QTLTTF
Trigger: GAAAGTAGTGAGAGTTTGCCAAAAGAAGCCTTTCTG...GTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp GTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATTTACTGGTGGGTTGGGTaGATGTTCATGTCTTTTCTT +
Preference number: 4 (lower is better)
Translates to: VQEILHKVDFTWGIMHKIYWWVG*MFMSFL
Trigger: AAGAAAAGACATGAACATCCACCCAACCCACCAGTA...AATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp TACACTGCAGAATGGCTAAATCTAGCTGACATATGCATGATCTCACATACTTACGTGATACTGGTGGGTTaGGTGGATGTTCATGTCTTT +
Preference number: 4 (lower is better)
Translates to: YTAEWLNLADICMISHTYVILVG*VDVHVF
Trigger: AAAGACATGAACATCCACCCAACCCACCAGTATCAC...GTAAGTATGTGAGATCATGCATATGTCAGCTAGATTTAGCCATTCTGCAGTGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR CCA 90 bp AACAAATGTAGTGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTAGGAGTTTGAAAGGATaGTGGTGCACTCTCGCTTAC +
Preference number: 4 (lower is better)
Translates to: NKCSVYTHLSKKSCTRWIRSLKG*WCTLAY
Trigger: GTAAGCGAGAGTGCACCACCATCCTTTCAAACTCCT...AATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACACTACATTTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp TATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATACTACTGACAACTGCTaGAGGAGTGACAAGATTGGT +
Preference number: 4 (lower is better)
Translates to: YTHICPRNLAQGGFYMGYTTDNC*RSDKIG
Trigger: ACCAATCTTGTCACTCCTCCAGCAGTTGTCAGTAGT...ATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp AACACCCACACATATTCCCCAGCCTCAAAACTAAAGCAAGGTACACATTTACATGGGATTTGGCAAGGATaGCAAGGATACTGGATTTTT +
Preference number: 4 (lower is better)
Translates to: NTHTYSPASKLKQGTHLHGIWQG*QGYWIF
Trigger: AAAAATCCAGTATCCTTGCCATCCTTGCCAAATCCC...ATGTAAATGTGTACCTTGCTTTAGTTTTGAGGCTGGGGAATATGTGTGGGTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536444.5
ENST00000544627.5
CDS-3UTR CCA 90 bp GTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTAGGGATTTGGCAAGGATaGCAAGGATACTGGATTTTT +
Preference number: 4 (lower is better)
Translates to: VYTHLSKKSCTRWILHGVGIWQG*QGYWIF
Trigger: AAAAATCCAGTATCCTTGCCATCCTTGCCAAATCCC...TACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp AAATGTAGTGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTAAAGTGTTGTTCCCAATaGTGCAGCACTGGCAGTAGG +
Preference number: 4 (lower is better)
Translates to: KCSVYTHLSKKSCTRWILKCCSQ*CSTGSR
Trigger: CCTACTGCCAGTGCTGCACCATTGGGAACAACACTT...TAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACACTACATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp AGAATCATGCCAGTTACACATCTCAAATCCTTTGATCTACTTACTTCGTACTTTAAGTGTTGTTCCCAATaGTGCAGCACTGGCAGTAGG +
Preference number: 4 (lower is better)
Translates to: RIMPVTHLKSFDLLTSYFKCCSQ*CSTGSR
Trigger: CCTACTGCCAGTGCTGCACCATTGGGAACAACACTT...AAAGTACGAAGTAAGTAGATCAAAGGATTTGAGATGTGTAACTGGCATGATTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536444.5
ENST00000544627.5
CDS-3UTR CCA 90 bp GTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTACTGGTTTTCAATTCTTaGGGTGGTATTGCTGTTCTG +
Preference number: 4 (lower is better)
Translates to: VYTHLSKKSCTRWILHGVLVFNS*GGIAVL
Trigger: CAGAACAGCAATACCACCCCAAGAATTGAAAACCAG...TACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp TATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATTTGAATCACTGCCAGTaGCTTTTCCACACTGTGATG +
Preference number: 4 (lower is better)
Translates to: YTHICPRNLAQGGFYMGYLNHCQ*LFHTVM
Trigger: CATCACAGTGTGGAAAAGCCACTGGCAGTGATTCAA...ATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp AAATGTAGTGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTATTGAAGAGGCGGTGCTaGTTGTATGGGTTGCAATGG +
Preference number: 4 (lower is better)
Translates to: KCSVYTHLSKKSCTRWILLKRRC*LYGLQW
Trigger: CCATTGCAACCCATACAACCAGCACCGCCTCTTCAA...TAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACACTACATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp AAATGTAGTGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTAAGATGGTCCACTTGTTaGCACCCCAGATGGTTGAAG +
Preference number: 4 (lower is better)
Translates to: KCSVYTHLSKKSCTRWILRWSTC*HPRWLK
Trigger: CTTCAACCATCTGGGGTGCCAACAAGTGGACCATCT...TAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACACTACATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp AAATGTAGTGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTAGTTTGCAGGAGCTCTTaGTACAGGGAGTCTTGTGGT +
Preference number: 4 (lower is better)
Translates to: KCSVYTHLSKKSCTRWILVCRSS*YRESCG
Trigger: ACCACAAGACTCCCTGTACCAAGAGCTCCTGCAAAC...TAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACACTACATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp AATGAAAATGGGAGACTCCAATGCAATAACACCTACATAAGGAAAAACACACATGTTTGCAGGAGCTCTTaGTACAGGGAGTCTTGTGGT +
Preference number: 4 (lower is better)
Translates to: NENGRLQCNNTYIRKNTHVCRSS*YRESCG
Trigger: ACCACAAGACTCCCTGTACCAAGAGCTCCTGCAAAC...ATGTGTGTTTTTCCTTATGTAGGTGTTATTGCATTGGAGTCTCCCATTTTCATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536444.5
ENST00000544627.5
CDS-3UTR CCA 90 bp TGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTACTGTAACACTATTTTaGGGATTGACCTGCCGAACA +
Preference number: 4 (lower is better)
Translates to: CIHTSVQEILHKVDFTWGTVTLF*GLTCRT
Trigger: TGTTCGGCAGGTCAATCCCCAAAATAGTGTTACAGT...ACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp GTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATTGTCAAGGAGAACATTTaGAAGGAAGGTCTTTGCAGT +
Preference number: 4 (lower is better)
Translates to: VQEILHKVDFTWGIMHKIVKENI*KEGLCS
Trigger: ACTGCAAAGACCTTCCTTCCAAATGTTCTCCTTGAC...AATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536444.5
CDS-3UTR TCA 90 bp AAATGTAGTGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTAACTGCTTCAAGTTGCTaGCGATCACTCACTCTCATC +
Preference number: 4 (lower is better)
Translates to: KCSVYTHLSKKSCTRWILTASSC*RSLTLI
Trigger: GATGAGAGTGAGTGATCGTCAGCAACTTGAAGCAGT...TAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACACTACATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR TCA 90 bp CAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATTAAAGGTACGATCAAAGGTTaGTTCAGAAGTCAGCTCATC +
Preference number: 4 (lower is better)
Translates to: QEILHKVDFTWGIMHKIKGTIKG*FRSQLI
Trigger: GATGAGCTGACTTCTGAATCAACCTTTGATCGTACC...TTTAATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR TCA 90 bp TGGTGGGCACAATCTAATCAGCTGTCAATGAATACAAAGCAGGCAGAAAAACATTTCAGGAGGTCGATCTaGACAAATAGTTGTATCATC +
Preference number: 4 (lower is better)
Translates to: WWAQSNQLSMNTKQAEKHFRRSI*TNSCII
Trigger: GATGATACAACTATTTGTTCAGATCGACCTCCTGAA...ATGTTTTTCTGCCTGCTTTGTATTCATTGACAGCTGATTAGATTGTGCCCACCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR TCA 90 bp AGTGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGTTCAGGAGGTCGATCTaGACAAATAGTTGTATCATC +
Preference number: 4 (lower is better)
Translates to: SVYTHLSKKSCTRWILHGFRRSI*TNSCII
Trigger: GATGATACAACTATTTGTTCAGATCGACCTCCTGAA...CCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR TCA 90 bp CATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAATTGTCCATGTCTTCTaGTTTAGAACGTTTTCGTCT +
Preference number: 4 (lower is better)
Translates to: HLSKKSCTRWILHGVSCTIVHVF*FRTFSS
Trigger: AGACGAAAACGTTCTAAATCAGAAGACATGGACAAT...TGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR TCA 90 bp CTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGAATTGTCCATGTCTTCTaGTTTAGAACGTTTTCGTCT +
Preference number: 4 (lower is better)
Translates to: LSKKSCTRWILHGVSCTRIVHVF*FRTFSS
Trigger: AGACGAAAACGTTCTAAATCAGAAGACATGGACAAT...TCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR TCA 90 bp AGTGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGAGTGACAAGATTGGTTaGAGATACTGTATTCACAGG +
Preference number: 4 (lower is better)
Translates to: SVYTHLSKKSCTRWILHGSDKIG*RYCIHR
Trigger: CCTGTGAATACAGTATCTTCAACCAATCTTGTCACT...CCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR TCA 90 bp TGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATAGTGACAAGATTGGTTaGAGATACTGTATTCACAGG +
Preference number: 4 (lower is better)
Translates to: CPRNLAQGGFYMGYHAQDSDKIG*RYCIHR
Trigger: CCTGTGAATACAGTATCTTCAACCAATCTTGTCACT...ATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR TCA 90 bp AGTGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGCAGCTGCTTTCTTACTaGCAGAAGCATCTATTGTTT +
Preference number: 4 (lower is better)
Translates to: SVYTHLSKKSCTRWILHGQLLSY*QKHLLF
Trigger: AAACAATAGATGCTTCTGTCAGTAAGAAAGCAGCTG...CCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR TCA 90 bp AAATGTAGTGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTAGGCTTTTCCACACTGTaGTGTGCTATCAGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: KCSVYTHLSKKSCTRWILGFSTL*CAISCF
Trigger: AAAGCAGCTGATAGCACATCACAGTGTGGAAAAGCC...TAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACACTACATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR TCA 90 bp CAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATTAAAATCAATGACACCACTTaGATCACTGCCAGTGGCTTT +
Preference number: 4 (lower is better)
Translates to: QEILHKVDFTWGIMHKIKINDTT*ITASGF
Trigger: AAAGCCACTGGCAGTGATTCAAGTGGTGTCATTGAT...TTTAATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR TCA 90 bp AAATGTAGTGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACTCCAGGACACTCCATaGCAGTACTATGCCATTTTG +
Preference number: 4 (lower is better)
Translates to: KCSVYTHLSKKSCTRWILLQDTP*QYYAIL
Trigger: CAAAATGGCATAGTACTGTCATGGAGTGTCCTGGAG...TAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACACTACATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR GCA 90 bp TACACTGCAGAATGGCTAAATCTAGCTGACATATGCATGATCTCACATACTTACTTTGACCTTGTACACTaGTTCAAGTTGCTGACGATC +
Preference number: 4 (lower is better)
Translates to: YTAEWLNLADICMISHTYFDLVH*FKLLTI
Trigger: GATCGTCAGCAACTTGAAGCAGTGTACAAGGTCAAA...GTAAGTATGTGAGATCATGCATATGTCAGCTAGATTTAGCCATTCTGCAGTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR GCA 90 bp CATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACATCTTCATGTATTACTTaGTCTTCTTCCTCAGGTTTG +
Preference number: 4 (lower is better)
Translates to: HLSKKSCTRWILHGVSCTSSCIT*SSSSGL
Trigger: CAAACCTGAGGAAGAAGAGCAAGTAATACATGAAGA...TGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR GCA 90 bp TGGTGGGCACAATCTAATCAGCTGTCAATGAATACAAAGCAGGCAGAAAAACATTCAAATACAGCACACTaGAGCGCACACAATTTTTCT +
Preference number: 4 (lower is better)
Translates to: WWAQSNQLSMNTKQAEKHSNTAH*SAHNFS
Trigger: AGAAAAATTGTGTGCGCTGCAGTGTGCTGTATTTGA...ATGTTTTTCTGCCTGCTTTGTATTCATTGACAGCTGATTAGATTGTGCCCACCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR GCA 90 bp GTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATTTCAAATACAGCACACTaGAGCGCACACAATTTTTCT +
Preference number: 4 (lower is better)
Translates to: VQEILHKVDFTWGIMHKISNTAH*SAHNFS
Trigger: AGAAAAATTGTGTGCGCTGCAGTGTGCTGTATTTGA...AATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR GCA 90 bp ACATATCAACATTGCAACCACTGCAGGTCAAAACATATACATGCAGATATAGACGCATCTGTCTCACTGTaGCTGCATTTCTGTAAGACA +
Preference number: 4 (lower is better)
Translates to: TYQHCNHCRSKHIHADIDASVSL*LHFCKT
Trigger: TGTCTTACAGAAATGCAGGCACAGTGAGACAGATGC...GTCTATATCTGCATGTATATGTTTTGACCTGCAGTGGTTGCAATGTTGATATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536444.5
CDS-3UTR GCA 90 bp CAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATTAAAACTGCAACAGGTACATaGAAAATCACTGGCAAAGGC +
Preference number: 4 (lower is better)
Translates to: QEILHKVDFTWGIMHKIKTATGT*KITGKG
Trigger: GCCTTTGCCAGTGATTTTGCATGTACCTGTTGCAGT...TTTAATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR GCA 90 bp TGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATACTGTAGGTGGGCTTTaGACAGAAATGAATTCAACA +
Preference number: 4 (lower is better)
Translates to: CPRNLAQGGFYMGYHAQDTVGGL*TEMNST
Trigger: TGTTGAATTCATTTCTGTGCAAAGCCCACCTACAGT...ATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR GCA 90 bp TGGTGGGCACAATCTAATCAGCTGTCAATGAATACAAAGCAGGCAGAAAAACATACTGTAGGTGGGCTTTaGACAGAAATGAATTCAACA +
Preference number: 4 (lower is better)
Translates to: WWAQSNQLSMNTKQAEKHTVGGL*TEMNST
Trigger: TGTTGAATTCATTTCTGTGCAAAGCCCACCTACAGT...ATGTTTTTCTGCCTGCTTTGTATTCATTGACAGCTGATTAGATTGTGCCCACCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR GCA 90 bp TGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATTGCTGTTCTGTTCTaGAGCAGACGAAGTACTAAA +
Preference number: 4 (lower is better)
Translates to: CIHTSVQEILHKVDFTWGIAVLF*SRRSTK
Trigger: TTTAGTACTTCGTCTGCTGCAGAACAGAACAGCAAT...ACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR GCA 90 bp AAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATTAAAATTCTTGGGGTGGTATTaGTGTTCTGTTCTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: KKSCTRWILHGVSCTRLKFLGWY*CSVLQQ
Trigger: CTGCTGCAGAACAGAACAGCAATACCACCCCAAGAA...TTTTAATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR GCA 90 bp AAATGTAGTGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTAAGCCTGAGCTGGTGGTaGAGGAAGAGTTGTATAAAC +
Preference number: 4 (lower is better)
Translates to: KCSVYTHLSKKSCTRWILSLSWW*RKSCIN
Trigger: GTTTATACAACTCTTCCTGCACCACCAGCTCAGGCT...TAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACACTACATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR GCA 90 bp GTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATTCTGCAAAGTAGTATTTaGTACCAGATACAAACTGGG +
Preference number: 4 (lower is better)
Translates to: VQEILHKVDFTWGIMHKILQSSI*YQIQTG
Trigger: CCCAGTTTGTATCTGGTAGCAAATACTACTTTGCAG...AATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR GCA 90 bp AGTGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGCTGCAAAGTAGTATTTaGTACCAGATACAAACTGGG +
Preference number: 4 (lower is better)
Translates to: SVYTHLSKKSCTRWILHGLQSSI*YQIQTG
Trigger: CCCAGTTTGTATCTGGTAGCAAATACTACTTTGCAG...CCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR GCA 90 bp TATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATATCCTTGGCTCGTACTaGAAAGTAGTATTTGCTACC +
Preference number: 4 (lower is better)
Translates to: YTHICPRNLAQGGFYMGYILGSY*KVVFAT
Trigger: GGTAGCAAATACTACTTTGCAGTACGAGCCAAGGAT...ATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR GCA 90 bp CACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACTGTCCAAGAAATCTTaGACAAGGTGGATTTTACAT +
Preference number: 4 (lower is better)
Translates to: HICPRNLAQGGFYMGYHALSKKS*TRWILH
Trigger: ATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAG...TGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR GCA 90 bp ACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACCTGTCCAAGAAATCTTaGACAAGGTGGATTTTACAT +
Preference number: 4 (lower is better)
Translates to: TSVQEILHKVDFTWGIMHLSKKS*TRWILH
Trigger: ATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAG...GTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR GCA 90 bp GTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTAAATGGGAGACTCCAATaGAATAACACCTACATAAGG +
Preference number: 4 (lower is better)
Translates to: VYTHLSKKSCTRWILHGVNGRLQ*NNTYIR
Trigger: CCTTATGTAGGTGTTATTGCATTGGAGTCTCCCATT...TACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536444.5
ENST00000544627.5
CDS-3UTR GCA 90 bp GTGATAAAACAACAAAATCTTAGGATGTTGAGGATACTGAATTGGCCCAAGAAACTGCTTAAGGAGGTCTaGAGACAGATGCACCTAAGA +
Preference number: 4 (lower is better)
Translates to: VIKQQNLRMLRILNWPKKLLKEV*RQMHLR
Trigger: TCTTAGGTGCATCTGTCTGCAGACCTCCTTAAGCAG...TTTCTTGGGCCAATTCAGTATCCTCAACATCCTAAGATTTTGTTGTTTTATCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536444.5
CDS-3UTR GCA 90 bp CTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATTAACACTTACCCAGTaGAGTAAGGGAATTGTAAGA +
Preference number: 4 (lower is better)
Translates to: LSKKSCTRWILHGVSCTRLTLTQ*SKGIVR
Trigger: TCTTACAATTCCCTTACTGCACTGGGTAAGTGTTAA...TCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536444.5
CDS-3UTR CCA 90 bp ACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACTCTGGAGTTATATTATaGGGAGACAAAGGTTCACAA +
Preference number: 4 (lower is better)
Translates to: TSVQEILHKVDFTWGIMHSGVIL*GDKGSQ
Trigger: TTGTGAACCTTTGTCTCCCCATAATATAACTCCAGA...GTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp ACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAGGCAGTTTAGAGACTaGTTCTGGAGTTATATTATG +
Preference number: 4 (lower is better)
Translates to: TSVQEILHKVDFTWGIMHRQFRD*FWSYIM
Trigger: CATAATATAACTCCAGAACCAGTCTCTAAACTGCCT...GTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp CACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCAAACTGGTACAGACTTTaGTTCAAAGGTACGATCAAA +
Preference number: 4 (lower is better)
Translates to: HICPRNLAQGGFYMGYHANWYRL*FKGTIK
Trigger: TTTGATCGTACCTTTGAACCAAAGTCTGTACCAGTT...TGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp AGTGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTCAATTTCAGGAACTaGTTCACAAACTGGTACAGA +
Preference number: 4 (lower is better)
Translates to: SVYTHLSKKSCTRWILHGVNFRN*FTNWYR
Trigger: TCTGTACCAGTTTGTGAACCAGTTCCTGAAATTGAC...CCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp AGTGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGCAGAAAGGCTTCTTTTaGCAAACTCTCACTACTTTC +
Preference number: 4 (lower is better)
Translates to: SVYTHLSKKSCTRWILHGQKGFF*QTLTTF
Trigger: GAAAGTAGTGAGAGTTTGCCAAAAGAAGCCTTTCTG...CCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp TGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTACTTTCTACTTCTGCTaGAGAGCACGTTTCATTTTG +
Preference number: 4 (lower is better)
Translates to: CIHTSVQEILHKVDFTWGTFYFC*RARFIL
Trigger: CAAAATGAAACGTGCTCTCCAGCAGAAGTAGAAAGT...ACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp CAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATTAAAAGCGTTTGGTTAACCTaGCTATCTTGGCCTGTAGTT +
Preference number: 4 (lower is better)
Translates to: QEILHKVDFTWGIMHKIKSVWLT*LSWPVV
Trigger: AACTACAGGCCAAGATAGCCAGGTTAACCAAACGCT...TTTAATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp GAAACTAAAAAGGTAACCGTGGAGTGGAAACTGCTACTAGAAAGTCTGTTATCATACTGGTGGGTTGGGTaGATGTTCATGTCTTTTCTT +
Preference number: 4 (lower is better)
Translates to: ETKKVTVEWKLLLESLLSYWWVG*MFMSFL
Trigger: AAGAAAAGACATGAACATCCACCCAACCCACCAGTA...TGATAACAGACTTTCTAGTAGCAGTTTCCACTCCACGGTTACCTTTTTAGTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536444.5
CDS-3UTR CCA 90 bp ACATATCAACATTGCAACCACTGCAGGTCAAAACATATACATGCAGATATAGACGTGATACTGGTGGGTTaGGTGGATGTTCATGTCTTT +
Preference number: 4 (lower is better)
Translates to: TYQHCNHCRSKHIHADIDVILVG*VDVHVF
Trigger: AAAGACATGAACATCCACCCAACCCACCAGTATCAC...GTCTATATCTGCATGTATATGTTTTGACCTGCAGTGGTTGCAATGTTGATATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536444.5
CDS-3UTR CCA 90 bp CAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATTAAAGTGATACTGGTGGGTTaGGTGGATGTTCATGTCTTT +
Preference number: 4 (lower is better)
Translates to: QEILHKVDFTWGIMHKIKVILVG*VDVHVF
Trigger: AAAGACATGAACATCCACCCAACCCACCAGTATCAC...TTTAATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp GAAACTAAAAAGGTAACCGTGGAGTGGAAACTGCTACTAGAAAGTCTGTTATCACGCTTACATTTCTTTTaGACTCCAGCATCTGTCTCA +
Preference number: 4 (lower is better)
Translates to: ETKKVTVEWKLLLESLLSRLHFF*TPASVS
Trigger: TGAGACAGATGCTGGAGTCCAAAAGAAATGTAAGCG...TGATAACAGACTTTCTAGTAGCAGTTTCCACTCCACGGTTACCTTTTTAGTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536444.5
CDS-3UTR CCA 90 bp TACACTGCAGAATGGCTAAATCTAGCTGACATATGCATGATCTCACATACTTACCGCTTACATTTCTTTTaGACTCCAGCATCTGTCTCA +
Preference number: 4 (lower is better)
Translates to: YTAEWLNLADICMISHTYRLHFF*TPASVS
Trigger: TGAGACAGATGCTGGAGTCCAAAAGAAATGTAAGCG...GTAAGTATGTGAGATCATGCATATGTCAGCTAGATTTAGCCATTCTGCAGTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR CCA 90 bp AGAATCATGCCAGTTACACATCTCAAATCCTTTGATCTACTTACTTCGTACTTTAGGAGTTTGAAAGGATaGTGGTGCACTCTCGCTTAC +
Preference number: 4 (lower is better)
Translates to: RIMPVTHLKSFDLLTSYFRSLKG*WCTLAY
Trigger: GTAAGCGAGAGTGCACCACCATCCTTTCAAACTCCT...AAAGTACGAAGTAAGTAGATCAAAGGATTTGAGATGTGTAACTGGCATGATTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536444.5
ENST00000544627.5
CDS-3UTR CCA 90 bp AAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATTAAAAAGGAGTTTGAAAGGATaGTGGTGCACTCTCGCTTAC +
Preference number: 4 (lower is better)
Translates to: KKSCTRWILHGVSCTRLKRSLKG*WCTLAY
Trigger: GTAAGCGAGAGTGCACCACCATCCTTTCAAACTCCT...TTTTAATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp AAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATTAAAAGGAACCCGAAGTCACTaGAGTCTGCAATTTAGGTTG +
Preference number: 4 (lower is better)
Translates to: KKSCTRWILHGVSCTRLKGTRSH*SLQFRL
Trigger: CAACCTAAATTGCAGACTCCAGTGACTTCGGGTTCC...TTTTAATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp AATGAAAATGGGAGACTCCAATGCAATAACACCTACATAAGGAAAAACACACATAAAGAGATTGTAGGCTaGGGATTTCCACTAGGCACC +
Preference number: 4 (lower is better)
Translates to: NENGRLQCNNTYIRKNTHKEIVG*GFPLGT
Trigger: GGTGCCTAGTGGAAATCCCCAGCCTACAATCTCTTT...ATGTGTGTTTTTCCTTATGTAGGTGTTATTGCATTGGAGTCTCCCATTTTCATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536444.5
ENST00000544627.5
CDS-3UTR CCA 90 bp TGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATAGAAGGAACGTTGTTTaGTTTAGTGGGATTTGGCAA +
Preference number: 4 (lower is better)
Translates to: CPRNLAQGGFYMGYHAQDRRNVV*FSGIWQ
Trigger: TTGCCAAATCCCACTAAACCAAACAACGTTCCTTCT...ATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp AAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATTAAAAAATAGAGTGTGCTGTTaGAACAGCCTGCACAGCAAG +
Preference number: 4 (lower is better)
Translates to: KKSCTRWILHGVSCTRLKNRVCC*NSLHSK
Trigger: CTTGCTGTGCAGGCTGTTCCAACAGCACACTCTATT...TTTTAATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp CAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATTAAAGTAGTAAGTGTATGGTaGTCTGAGATGGTCCACTTG +
Preference number: 4 (lower is better)
Translates to: QEILHKVDFTWGIMHKIKVVSVW*SEMVHL
Trigger: CAAGTGGACCATCTCAGACCACCATACACTTACTAC...TTTAATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp AACAAATGTAGTGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTGGTCACCTGAGTTACTaGACGATGTGTTACATTCAC +
Preference number: 4 (lower is better)
Translates to: NKCSVYTHLSKKSCTRWIGHLSY*TMCYIH
Trigger: GTGAATGTAACACATCGTCCAGTAACTCAGGTGACC...AATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACACTACATTTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp GTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTAGTCCATAAATATCCTTaGCTCGTACTGCAAAGTAGT +
Preference number: 4 (lower is better)
Translates to: VYTHLSKKSCTRWILHGVVHKYP*LVLQSS
Trigger: ACTACTTTGCAGTACGAGCCAAGGATATTTATGGAC...TACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp CATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAAATCTTGCACAAGGTaGATTTTACATGGGGTATCA +
Preference number: 4 (lower is better)
Translates to: HLSKKSCTRWILHGVSCTKSCTR*ILHGVS
Trigger: TGATACCCCATGTAAAATCCACCTTGTGCAAGATTT...TGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp GGAACACCTCTCTGTGAGGCAAATGGTATCTCAACAAATACCGACTTTTCAAGGATTACTTTCTACTTCTaGAGAGCACGTTTCATTTTG +
Preference number: 4 (lower is better)
Translates to: GTPLCEANGISTNTDFSRITFYF*RARFIL
Trigger: CAAAATGAAACGTGCTCTCCAGAAGTAGAAAGTAAT...CCTTGAAAAGTCGGTATTTGTTGAGATACCATTTGCCTCACAGAGAGGTGTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536444.5
CDS-3UTR TCA 90 bp AGAATCATGCCAGTTACACATCTCAAATCCTTTGATCTACTTACTTCGTACTTTGGTACGATCAAAGGTTaGTTCAGAAGTCAGCTCATC +
Preference number: 4 (lower is better)
Translates to: RIMPVTHLKSFDLLTSYFGTIKG*FRSQLI
Trigger: GATGAGCTGACTTCTGAATCAACCTTTGATCGTACC...AAAGTACGAAGTAAGTAGATCAAAGGATTTGAGATGTGTAACTGGCATGATTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536444.5
ENST00000544627.5
CDS-3UTR TCA 90 bp TGGTGGGCACAATCTAATCAGCTGTCAATGAATACAAAGCAGGCAGAAAAACATATTGTCCATGTCTTCTaGTTTAGAACGTTTTCGTCT +
Preference number: 4 (lower is better)
Translates to: WWAQSNQLSMNTKQAEKHIVHVF*FRTFSS
Trigger: AGACGAAAACGTTCTAAATCAGAAGACATGGACAAT...ATGTTTTTCTGCCTGCTTTGTATTCATTGACAGCTGATTAGATTGTGCCCACCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR TCA 90 bp AGAATCATGCCAGTTACACATCTCAAATCCTTTGATCTACTTACTTCGTACTTTTGGCCTGTAGTTCAGTaGGAACTGTTTTATGCCTCT +
Preference number: 4 (lower is better)
Translates to: RIMPVTHLKSFDLLTSYFWPVVQ*ELFYAS
Trigger: AGAGGCATAAAACAGTTCTCACTGAACTACAGGCCA...AAAGTACGAAGTAAGTAGATCAAAGGATTTGAGATGTGTAACTGGCATGATTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536444.5
ENST00000544627.5
CDS-3UTR TCA 90 bp TACACTGCAGAATGGCTAAATCTAGCTGACATATGCATGATCTCACATACTTACAGTGACAAGATTGGTTaGAGATACTGTATTCACAGG +
Preference number: 4 (lower is better)
Translates to: YTAEWLNLADICMISHTYSDKIG*RYCIHR
Trigger: CCTGTGAATACAGTATCTTCAACCAATCTTGTCACT...GTAAGTATGTGAGATCATGCATATGTCAGCTAGATTTAGCCATTCTGCAGTGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR TCA 90 bp AAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATTAAAACAACTGCTGGAGGAGTaGCAAGATTGGTTGAAGATA +
Preference number: 4 (lower is better)
Translates to: KKSCTRWILHGVSCTRLKQLLEE*QDWLKI
Trigger: TATCTTCAACCAATCTTGTCACTCCTCCAGCAGTTG...TTTTAATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR TCA 90 bp AATGAAAATGGGAGACTCCAATGCAATAACACCTACATAAGGAAAAACACACATGTCTGCAATTTAGGTTaGCTACTGACAACTGCTGGA +
Preference number: 4 (lower is better)
Translates to: NENGRLQCNNTYIRKNTHVCNLG*LLTTAG
Trigger: TCCAGCAGTTGTCAGTAGTCAACCTAAATTGCAGAC...ATGTGTGTTTTTCCTTATGTAGGTGTTATTGCATTGGAGTCTCCCATTTTCATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536444.5
ENST00000544627.5
CDS-3UTR TCA 90 bp TTTCACCTAATTAACAACTCAGGAGACCAGACAAAAGAAACAACAAATAGATCCTTTCCACTAGGCACCTaGGTAGTAGCAACTACAGTA +
Preference number: 4 (lower is better)
Translates to: FHLINNSGDQTKETTNRSFPLGT*VVATTV
Trigger: TACTGTAGTTGCTACTACTCAGGTGCCTAGTGGAAA...GGATCTATTTGTTGTTTCTTTTGTCTGGTCTCCTGAGTTGTTAATTAGGTGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536444.5
ENST00000544627.5
CDS-3UTR TCA 90 bp AAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATTAAAATTTCCACTAGGCACCTaGGTAGTAGCAACTACAGTA +
Preference number: 4 (lower is better)
Translates to: KKSCTRWILHGVSCTRLKFPLGT*VVATTV
Trigger: TACTGTAGTTGCTACTACTCAGGTGCCTAGTGGAAA...TTTTAATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR TCA 90 bp GTGATAAAACAACAAAATCTTAGGATGTTGAGGATACTGAATTGGCCCAAGAAAACATTGCCAGATGGTTaGTTAGTCACCAAAGTCCCT +
Preference number: 4 (lower is better)
Translates to: VIKQQNLRMLRILNWPKKTLPDG*LVTKVP
Trigger: AGGGACTTTGGTGACTAATCAACCATCTGGCAATGT...TTTCTTGGGCCAATTCAGTATCCTCAACATCCTAAGATTTTGTTGTTTTATCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000536444.5
CDS-3UTR TCA 90 bp CTTCAAAACCCTAATAAAAATAGGGCCACTTGCTGGAGCCCAGTTTGTATTAGACATGGTAGGCTAATTTaGGGACACCATCTTATAATA +
Preference number: 4 (lower is better)
Translates to: LQNPNKNRATCWSPVCIRHGRLI*GHHLII
Trigger: TATTATAAGATGGTGTCCTCAAATTAGCCTACCATG...TCTAATACAAACTGGGCTCCAGCAAGTGGCCCTATTTTTATTAGGGTTTTGAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536444.5
CDS-3UTR TCA 90 bp AGTGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGCTTCATGAGAATTGCTaGTTTTTGTGTGTCCCAAAA +
Preference number: 4 (lower is better)
Translates to: SVYTHLSKKSCTRWILHGLHENC*FLCVPK
Trigger: TTTTGGGACACACAAAAATCAGCAATTCTCATGAAG...CCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536444.5
CDS-3UTR GCA 90 bp CAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATTAAATTTGACCTTGTACACTaGTTCAAGTTGCTGACGATC +
Preference number: 4 (lower is better)
Translates to: QEILHKVDFTWGIMHKIKFDLVH*FKLLTI
Trigger: GATCGTCAGCAACTTGAAGCAGTGTACAAGGTCAAA...TTTAATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR GCA 90 bp TACACTGCAGAATGGCTAAATCTAGCTGACATATGCATGATCTCACATACTTACTTCATCCTCAGAAGGTaGAAGCTTTTCCAAAATAGG +
Preference number: 4 (lower is better)
Translates to: YTAEWLNLADICMISHTYFILRR*KLFQNR
Trigger: CCTATTTTGGAAAAGCTTGCACCTTCTGAGGATGAA...GTAAGTATGTGAGATCATGCATATGTCAGCTAGATTTAGCCATTCTGCAGTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR GCA 90 bp GTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTAGAGCACGTTTCATTTTaGGATATAACTTCAGACTCA +
Preference number: 4 (lower is better)
Translates to: VYTHLSKKSCTRWILHGVEHVSF*DITSDS
Trigger: TGAGTCTGAAGTTATATCGCAAAATGAAACGTGCTC...TACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR GCA 90 bp AACACCCACACATATTCCCCAGCCTCAAAACTAAAGCAAGGTACACATTTACATGAGCACGTTTCATTTTaGGATATAACTTCAGACTCA +
Preference number: 4 (lower is better)
Translates to: NTHTYSPASKLKQGTHLHEHVSF*DITSDS
Trigger: TGAGTCTGAAGTTATATCGCAAAATGAAACGTGCTC...ATGTAAATGTGTACCTTGCTTTAGTTTTGAGGCTGGGGAATATGTGTGGGTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000536444.5
ENST00000544627.5
CDS-3UTR GCA 90 bp GTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATTATTACTTTCTACTTCTaGTGGAGAGCACGTTTCATT +
Preference number: 4 (lower is better)
Translates to: VQEILHKVDFTWGIMHKIITFYF*WRARFI
Trigger: AATGAAACGTGCTCTCCAGCAGAAGTAGAAAGTAAT...AATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000540793.5
ENST00000544627.5
CDS-3UTR GCA 90 bp AGTGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGATTACTTTCTACTTCTaGTGGAGAGCACGTTTCATT +
Preference number: 4 (lower is better)
Translates to: SVYTHLSKKSCTRWILHGITFYF*WRARFI
Trigger: AATGAAACGTGCTCTCCAGCAGAAGTAGAAAGTAAT...CCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540793.5
ENST00000544627.5
CDS-3UTR GCA 90 bp TGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATTCTTCATGTATTACTTaGTCTTCTTCCTCAGGTTTG +
Preference number: 4 (lower is better)
Translates to: CPRNLAQGGFYMGYHAQDSSCIT*SSSSGL
Trigger: CAAACCTGAGGAAGAAGAGCAAGTAATACATGAAGA...ATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR GCA 90 bp AGAATCATGCCAGTTACACATCTCAAATCCTTTGATCTACTTACTTCGTACTTTACTGCAACAGGTACATaGAAAATCACTGGCAAAGGC +
Preference number: 4 (lower is better)
Translates to: RIMPVTHLKSFDLLTSYFTATGT*KITGKG
Trigger: GCCTTTGCCAGTGATTTTGCATGTACCTGTTGCAGT...AAAGTACGAAGTAAGTAGATCAAAGGATTTGAGATGTGTAACTGGCATGATTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536444.5
ENST00000544627.5
CDS-3UTR GCA 90 bp TGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTCTGTCCAAGAAATCTTaGACAAGGTGGATTTTACAT +
Preference number: 4 (lower is better)
Translates to: CIHTSVQEILHKVDFTWGLSKKS*TRWILH
Trigger: ATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAG...ACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR GCA 90 bp GTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATTAACACATATCAACATTaGAACCACTGCAGGTCAAAA +
Preference number: 4 (lower is better)
Translates to: VQEILHKVDFTWGIMHKINTYQH*NHCRSK
Trigger: TTTTGACCTGCAGTGGTTGCAATGTTGATATGTGTT...AATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536444.5
CDS-3UTR GCA 90 bp TGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATAACAAAACATGTGTTTaGATTATCCTATTCCTCCCC +
Preference number: 4 (lower is better)
Translates to: CPRNLAQGGFYMGYHAQDNKTCV*IILFLP
Trigger: GGGGAGGAATAGGATAATGCAAACACATGTTTTGTT...ATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000536444.5
CDS-3UTR GCA 90 bp TGGTGGGCACAATCTAATCAGCTGTCAATGAATACAAAGCAGGCAGAAAAACATGAAATATGCATACACTaGAGAATGGCTAAATCTAGC +
Preference number: 4 (lower is better)
Translates to: WWAQSNQLSMNTKQAEKHEICIH*RMAKSS
Trigger: GCTAGATTTAGCCATTCTGCAGTGTATGCATATTTC...ATGTTTTTCTGCCTGCTTTGTATTCATTGACAGCTGATTAGATTGTGCCCACCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR GCA 90 bp AAATGTAGTGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTAAAGATGGCTGCAATGTaGACTCAAGAACTCACACAG +
Preference number: 4 (lower is better)
Translates to: KCSVYTHLSKKSCTRWILKMAAM*TQELTQ
Trigger: CTGTGTGAGTTCTTGAGTGCACATTGCAGCCATCTT...TAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACACTACATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544627.5
CDS-3UTR CCA 90 bp TGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATTCTGGAGTTATATTATaGGGAGACAAAGGTTCACAA +
Preference number: 4 (lower is better)
Translates to: CPRNLAQGGFYMGYHAQDSGVIL*GDKGSQ
Trigger: TTGTGAACCTTTGTCTCCCCATAATATAACTCCAGA...ATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp TGGTGGGCACAATCTAATCAGCTGTCAATGAATACAAAGCAGGCAGAAAAACATTCTGGAGTTATATTATaGGGAGACAAAGGTTCACAA +
Preference number: 4 (lower is better)
Translates to: WWAQSNQLSMNTKQAEKHSGVIL*GDKGSQ
Trigger: TTGTGAACCTTTGTCTCCCCATAATATAACTCCAGA...ATGTTTTTCTGCCTGCTTTGTATTCATTGACAGCTGATTAGATTGTGCCCACCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR CCA 90 bp AAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATTAAAATGGATCACCAGAAACTaGTTCAGCAGGCAGTTTAGA +
Preference number: 4 (lower is better)
Translates to: KKSCTRWILHGVSCTRLKWITRN*FSRQFR
Trigger: TCTAAACTGCCTGCTGAACCAGTTTCTGGTGATCCA...TTTTAATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp CACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCAATTTGTCTCATCGATTaGAAGGAGAGATGTTTTAGA +
Preference number: 4 (lower is better)
Translates to: HICPRNLAQGGFYMGYHAICLID*KERCFR
Trigger: TCTAAAACATCTCTCCTTCCAATCGATGAGACAAAT...TGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp AAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATTAAAACTGCTTCAAAGCGTTTaGTTAACCTGGCTATCTTGG +
Preference number: 4 (lower is better)
Translates to: KKSCTRWILHGVSCTRLKLLQSV*LTWLSW
Trigger: CCAAGATAGCCAGGTTAACCAAACGCTTTGAAGCAG...TTTTAATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp AACAAATGTAGTGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTCGCTTACATTTCTTTTaGACTCCAGCATCTGTCTCA +
Preference number: 4 (lower is better)
Translates to: NKCSVYTHLSKKSCTRWIRLHFF*TPASVS
Trigger: TGAGACAGATGCTGGAGTCCAAAAGAAATGTAAGCG...AATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACACTACATTTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp CAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATTAAAAGTTTGAAAGGATGGTaGTGCACTCTCGCTTACATT +
Preference number: 4 (lower is better)
Translates to: QEILHKVDFTWGIMHKIKSLKGW*CTLAYI
Trigger: AATGTAAGCGAGAGTGCACCACCATCCTTTCAAACT...TTTAATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp GTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATTCAACATTGCCAGATaGTTGATTAGTCACCAAAGT +
Preference number: 4 (lower is better)
Translates to: VYTHLSKKSCTRWILHGVFNIAR*LISHQS
Trigger: ACTTTGGTGACTAATCAACCATCTGGCAATGTTGAA...TACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp TTTCACCTAATTAACAACTCAGGAGACCAGACAAAAGAAACAACAAATAGATCCACCACTCACTGTAGGTaGGCTTTGCACAGAAATGAA +
Preference number: 4 (lower is better)
Translates to: FHLINNSGDQTKETTNRSTTHCR*ALHRNE
Trigger: TTCATTTCTGTGCAAAGCCCACCTACAGTGAGTGGT...GGATCTATTTGTTGTTTCTTTTGTCTGGTCTCCTGAGTTGTTAATTAGGTGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536444.5
ENST00000544627.5
CDS-3UTR CCA 90 bp ACATATCAACATTGCAACCACTGCAGGTCAAAACATATACATGCAGATATAGACGGATGGCAAGGATACTaGATTTTTGGTAAGACCACT +
Preference number: 4 (lower is better)
Translates to: TYQHCNHCRSKHIHADIDGWQGY*IFGKTT
Trigger: AGTGGTCTTACCAAAAATCCAGTATCCTTGCCATCC...GTCTATATCTGCATGTATATGTTTTGACCTGCAGTGGTTGCAATGTTGATATGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536444.5
CDS-3UTR CCA 90 bp TTTCACCTAATTAACAACTCAGGAGACCAGACAAAAGAAACAACAAATAGATCCTTGAATCACTGCCAGTaGCTTTTCCACACTGTGATG +
Preference number: 4 (lower is better)
Translates to: FHLINNSGDQTKETTNRSLNHCQ*LFHTVM
Trigger: CATCACAGTGTGGAAAAGCCACTGGCAGTGATTCAA...GGATCTATTTGTTGTTTCTTTTGTCTGGTCTCCTGAGTTGTTAATTAGGTGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536444.5
ENST00000544627.5
CDS-3UTR CCA 90 bp AAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATTAAAAGTAGTAAGTGTATGGTaGTCTGAGATGGTCCACTTG +
Preference number: 4 (lower is better)
Translates to: KKSCTRWILHGVSCTRLKVVSVW*SEMVHL
Trigger: CAAGTGGACCATCTCAGACCACCATACACTTACTAC...TTTTAATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp AAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATTAAAAGGTCACCTGAGTTACTaGACGATGTGTTACATTCAC +
Preference number: 4 (lower is better)
Translates to: KKSCTRWILHGVSCTRLKGHLSY*TMCYIH
Trigger: GTGAATGTAACACATCGTCCAGTAACTCAGGTGACC...TTTTAATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp TTTCACCTAATTAACAACTCAGGAGACCAGACAAAAGAAACAACAAATAGATCCGGTCACCTGAGTTACTaGACGATGTGTTACATTCAC +
Preference number: 4 (lower is better)
Translates to: FHLINNSGDQTKETTNRSGHLSY*TMCYIH
Trigger: GTGAATGTAACACATCGTCCAGTAACTCAGGTGACC...GGATCTATTTGTTGTTTCTTTTGTCTGGTCTCCTGAGTTGTTAATTAGGTGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536444.5
ENST00000544627.5
CDS-3UTR CCA 90 bp CAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATTAAAACTGTAACACTATTTTaGGGATTGACCTGCCGAACA +
Preference number: 4 (lower is better)
Translates to: QEILHKVDFTWGIMHKIKTVTLF*GLTCRT
Trigger: TGTTCGGCAGGTCAATCCCCAAAATAGTGTTACAGT...TTTAATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp GTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATTTGTTTACAACATATGTaGTTGTTTGAGGCACTCGAA +
Preference number: 4 (lower is better)
Translates to: VQEILHKVDFTWGIMHKICLQHM*LFEALE
Trigger: TTCGAGTGCCTCAAACAACCACATATGTTGTAAACA...AATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp GAAACTAAAAAGGTAACCGTGGAGTGGAAACTGCTACTAGAAAGTCTGTTATCAGTCCATAAATATCCTTaGCTCGTACTGCAAAGTAGT +
Preference number: 4 (lower is better)
Translates to: ETKKVTVEWKLLLESLLSVHKYP*LVLQSS
Trigger: ACTACTTTGCAGTACGAGCCAAGGATATTTATGGAC...TGATAACAGACTTTCTAGTAGCAGTTTCCACTCCACGGTTACCTTTTTAGTTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536444.5
CDS-3UTR CCA 90 bp TATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATGTCCATAAATATCCTTaGCTCGTACTGCAAAGTAGT +
Preference number: 4 (lower is better)
Translates to: YTHICPRNLAQGGFYMGYVHKYP*LVLQSS
Trigger: ACTACTTTGCAGTACGAGCCAAGGATATTTATGGAC...ATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp CTTCAAAACCCTAATAAAAATAGGGCCACTTGCTGGAGCCCAGTTTGTATTAGAAAATCTTGCACAAGGTaGATTTTACATGGGGTATCA +
Preference number: 4 (lower is better)
Translates to: LQNPNKNRATCWSPVCIRKSCTR*ILHGVS
Trigger: TGATACCCCATGTAAAATCCACCTTGTGCAAGATTT...TCTAATACAAACTGGGCTCCAGCAAGTGGCCCTATTTTTATTAGGGTTTTGAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000536444.5
CDS-3UTR CCA 90 bp AGAATCATGCCAGTTACACATCTCAAATCCTTTGATCTACTTACTTCGTACTTTTTTATTATCTGGCAATaGGGATGGGAGTGGGGAACA +
Preference number: 4 (lower is better)
Translates to: RIMPVTHLKSFDLLTSYFFIIWQ*GWEWGT
Trigger: TGTTCCCCACTCCCATCCCCATTGCCAGATAATAAA...AAAGTACGAAGTAAGTAGATCAAAGGATTTGAGATGTGTAACTGGCATGATTCT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000536444.5
CDS-3UTR CCA 90 bp AATGAAAATGGGAGACTCCAATGCAATAACACCTACATAAGGAAAAACACACATAATAGGGCCACTTGCTaGAGCCCAGTTTGTATTAGA +
Preference number: 4 (lower is better)
Translates to: NENGRLQCNNTYIRKNTHNRATC*SPVCIR
Trigger: TCTAATACAAACTGGGCTCCAGCAAGTGGCCCTATT...ATGTGTGTTTTTCCTTATGTAGGTGTTATTGCATTGGAGTCTCCCATTTTCATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536444.5
3UTR CAA 72 bp AAAGTGAGAGATGAGGATACCACAGGCATTACTTTGTaGACCTTGTACAGTACTGGAAAGTTCATGAAACAA +
Preference number: 4 (lower is better)
Translates to: KVRDEDTTGITL*TLYSTGKFMKQ
Trigger: TTGTTTCATGAACTTTCCAGTACTGTACAAGGTCAACAAAGTAATGCCTGTGGTATCCTCATCTCTCACTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261168.8
ENST00000536444.5
CDS-3UTR TCA 90 bp AACAAATGTAGTGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTCAGGAGGTCGATCTaGACAAATAGTTGTATCATC +
Preference number: 4 (lower is better)
Translates to: NKCSVYTHLSKKSCTRWIFRRSI*TNSCII
Trigger: GATGATACAACTATTTGTTCAGATCGACCTCCTGAA...AATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACACTACATTTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR TCA 90 bp TTTCACCTAATTAACAACTCAGGAGACCAGACAAAAGAAACAACAAATAGATCCGGCTTTGCACAGAAATaGATTCAACATTGCCAGATG +
Preference number: 4 (lower is better)
Translates to: FHLINNSGDQTKETTNRSGFAQK*IQHCQM
Trigger: CATCTGGCAATGTTGAATTCATTTCTGTGCAAAGCC...GGATCTATTTGTTGTTTCTTTTGTCTGGTCTCCTGAGTTGTTAATTAGGTGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536444.5
ENST00000544627.5
CDS-3UTR TCA 90 bp TTTCACCTAATTAACAACTCAGGAGACCAGACAAAAGAAACAACAAATAGATCCACATATGTGGTTGTTTaGGGCACTCGAACTGTAACA +
Preference number: 4 (lower is better)
Translates to: FHLINNSGDQTKETTNRSTYVVV*GTRTVT
Trigger: TGTTACAGTTCGAGTGCCTCAAACAACCACATATGT...GGATCTATTTGTTGTTTCTTTTGTCTGGTCTCCTGAGTTGTTAATTAGGTGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536444.5
ENST00000544627.5
CDS-3UTR TCA 90 bp AAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATTAAAAACATATGTGGTTGTTTaGGGCACTCGAACTGTAACA +
Preference number: 4 (lower is better)
Translates to: KKSCTRWILHGVSCTRLKTYVVV*GTRTVT
Trigger: TGTTACAGTTCGAGTGCCTCAAACAACCACATATGT...TTTTAATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR TCA 90 bp AGAATCATGCCAGTTACACATCTCAAATCCTTTGATCTACTTACTTCGTACTTTGGTTTAAAAATCACTTaGGTAGGCTGGATACAGTGG +
Preference number: 4 (lower is better)
Translates to: RIMPVTHLKSFDLLTSYFGLKIT*VGWIQW
Trigger: CCACTGTATCCAGCCTACTCAAGTGATTTTTAAACC...AAAGTACGAAGTAAGTAGATCAAAGGATTTGAGATGTGTAACTGGCATGATTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536444.5
CDS-3UTR TCA 90 bp AAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATTAAAACAGGCATTACTTTGTTaGCCTTGTACAGTACTGGAA +
Preference number: 4 (lower is better)
Translates to: KKSCTRWILHGVSCTRLKQALLC*PCTVLE
Trigger: TTCCAGTACTGTACAAGGTCAACAAAGTAATGCCTG...TTTTAATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000536444.5
CDS-3UTR TCA 90 bp AGAATCATGCCAGTTACACATCTCAAATCCTTTGATCTACTTACTTCGTACTTTGCTCAAGGGGATGAATaGGTTTCAGGAATTAGACAA +
Preference number: 4 (lower is better)
Translates to: RIMPVTHLKSFDLLTSYFAQGDE*VSGIRQ
Trigger: TTGTCTAATTCCTGAAACTCATTCATCCCCTTGAGC...AAAGTACGAAGTAAGTAGATCAAAGGATTTGAGATGTGTAACTGGCATGATTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536444.5
CDS-3UTR GCA 90 bp GAAACTAAAAAGGTAACCGTGGAGTGGAAACTGCTACTAGAAAGTCTGTTATCAGAGCACGTTTCATTTTaGGATATAACTTCAGACTCA +
Preference number: 4 (lower is better)
Translates to: ETKKVTVEWKLLLESLLSEHVSF*DITSDS
Trigger: TGAGTCTGAAGTTATATCGCAAAATGAAACGTGCTC...TGATAACAGACTTTCTAGTAGCAGTTTCCACTCCACGGTTACCTTTTTAGTTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536444.5
CDS-3UTR GCA 90 bp AAATGTAGTGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTATTGACTACTGACAACTaGTGGAGGAGTGACAAGATT +
Preference number: 4 (lower is better)
Translates to: KCSVYTHLSKKSCTRWILLTTDN*WRSDKI
Trigger: AATCTTGTCACTCCTCCAGCAGTTGTCAGTAGTCAA...TAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACACTACATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR GCA 90 bp AATGAAAATGGGAGACTCCAATGCAATAACACCTACATAAGGAAAAACACACATATCCTTGGCTCGTACTaGAAAGTAGTATTTGCTACC +
Preference number: 4 (lower is better)
Translates to: NENGRLQCNNTYIRKNTHILGSY*KVVFAT
Trigger: GGTAGCAAATACTACTTTGCAGTACGAGCCAAGGAT...ATGTGTGTTTTTCCTTATGTAGGTGTTATTGCATTGGAGTCTCCCATTTTCATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536444.5
ENST00000544627.5
CDS-3UTR GCA 90 bp CAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATTAAAAATGGGAGACTCCAATaGAATAACACCTACATAAGG +
Preference number: 4 (lower is better)
Translates to: QEILHKVDFTWGIMHKIKNGRLQ*NNTYIR
Trigger: CCTTATGTAGGTGTTATTGCATTGGAGTCTCCCATT...TTTAATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000536444.5
ENST00000544627.5
CDS-3UTR GCA 90 bp TATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCAACATTGCAACCACTaGAGGTCAAAACATATACAT +
Preference number: 4 (lower is better)
Translates to: YTHICPRNLAQGGFYMGYQHCNH*RSKHIH
Trigger: ATGTATATGTTTTGACCTGCAGTGGTTGCAATGTTG...ATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000536444.5
CDS-3UTR GCA 90 bp GTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATTCAAAAGGTGTTTGATTaGCCAGTTACCTTATTTACA +
Preference number: 4 (lower is better)
Translates to: VQEILHKVDFTWGIMHKIQKVFD*PVTLFT
Trigger: TGTAAATAAGGTAACTGGGCAATCAAACACCTTTTG...AATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000536444.5
CDS-3UTR GCA 90 bp GTGATAAAACAACAAAATCTTAGGATGTTGAGGATACTGAATTGGCCCAAGAAAAAAAATAGGGCCACTTaGTGGAGCCCAGTTTGTATT +
Preference number: 4 (lower is better)
Translates to: VIKQQNLRMLRILNWPKKKNRAT*WSPVCI
Trigger: AATACAAACTGGGCTCCAGCAAGTGGCCCTATTTTT...TTTCTTGGGCCAATTCAGTATCCTCAACATCCTAAGATTTTGTTGTTTTATCAC
38% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000536444.5
CDS-3UTR CCA 90 bp TATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATTCTGGAGTTATATTATaGGGAGACAAAGGTTCACAA +
Preference number: 4 (lower is better)
Translates to: YTHICPRNLAQGGFYMGYSGVIL*GDKGSQ
Trigger: TTGTGAACCTTTGTCTCCCCATAATATAACTCCAGA...ATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp TATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATTTTAGAGACTGGTTCTaGAGTTATATTATGGGGAGA +
Preference number: 4 (lower is better)
Translates to: YTHICPRNLAQGGFYMGYFRDWF*SYIMGR
Trigger: TCTCCCCATAATATAACTCCAGAACCAGTCTCTAAA...ATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp TACACTGCAGAATGGCTAAATCTAGCTGACATATGCATGATCTCACATACTTACAACTGGTACAGACTTTaGTTCAAAGGTACGATCAAA +
Preference number: 4 (lower is better)
Translates to: YTAEWLNLADICMISHTYNWYRL*FKGTIK
Trigger: TTTGATCGTACCTTTGAACCAAAGTCTGTACCAGTT...GTAAGTATGTGAGATCATGCATATGTCAGCTAGATTTAGCCATTCTGCAGTGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR CCA 90 bp GTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATTTCATTCTTTTCACCTTaGTCAATTTCCATACTGCTA +
Preference number: 4 (lower is better)
Translates to: VQEILHKVDFTWGIMHKISFFSP*SISILL
Trigger: TAGCAGTATGGAAATTGACCAAGGTGAAAAGAATGA...AATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp GTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATTATTTGTCTCATCGATTaGAAGGAGAGATGTTTTAGA +
Preference number: 4 (lower is better)
Translates to: VQEILHKVDFTWGIMHKIICLID*KERCFR
Trigger: TCTAAAACATCTCTCCTTCCAATCGATGAGACAAAT...AATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp AAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATTAAAATACTGGTGGGTTGGGTaGATGTTCATGTCTTTTCTT +
Preference number: 4 (lower is better)
Translates to: KKSCTRWILHGVSCTRLKYWWVG*MFMSFL
Trigger: AAGAAAAGACATGAACATCCACCCAACCCACCAGTA...TTTTAATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp AAATGTAGTGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACGCTTACATTTCTTTTaGACTCCAGCATCTGTCTCA +
Preference number: 4 (lower is better)
Translates to: KCSVYTHLSKKSCTRWILRLHFF*TPASVS
Trigger: TGAGACAGATGCTGGAGTCCAAAAGAAATGTAAGCG...TAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACACTACATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp AAATGTAGTGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTAGGATGGCAAGGATACTaGATTTTTGGTAAGACCACT +
Preference number: 4 (lower is better)
Translates to: KCSVYTHLSKKSCTRWILGWQGY*IFGKTT
Trigger: AGTGGTCTTACCAAAAATCCAGTATCCTTGCCATCC...TAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACACTACATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp CAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATTAAAAGAAGGAACGTTGTTTaGTTTAGTGGGATTTGGCAA +
Preference number: 4 (lower is better)
Translates to: QEILHKVDFTWGIMHKIKRRNVV*FSGIWQ
Trigger: TTGCCAAATCCCACTAAACCAAACAACGTTCCTTCT...TTTAATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp AAATGTAGTGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACTGGTTTTCAATTCTTaGGGTGGTATTGCTGTTCTG +
Preference number: 4 (lower is better)
Translates to: KCSVYTHLSKKSCTRWILLVFNS*GGIAVL
Trigger: CAGAACAGCAATACCACCCCAAGAATTGAAAACCAG...TAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACACTACATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp AGAATCATGCCAGTTACACATCTCAAATCCTTTGATCTACTTACTTCGTACTTTGCTGAGAAGAACTCATaGTTGATACAGGAGTGTGAT +
Preference number: 4 (lower is better)
Translates to: RIMPVTHLKSFDLLTSYFAEKNS*LIQECD
Trigger: ATCACACTCCTGTATCAACCATGAGTTCTTCTCAGC...AAAGTACGAAGTAAGTAGATCAAAGGATTTGAGATGTGTAACTGGCATGATTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536444.5
ENST00000544627.5
CDS-3UTR CCA 90 bp AAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATTAAAAGCTGAGAAGAACTCATaGTTGATACAGGAGTGTGAT +
Preference number: 4 (lower is better)
Translates to: KKSCTRWILHGVSCTRLKAEKNS*LIQECD
Trigger: ATCACACTCCTGTATCAACCATGAGTTCTTCTCAGC...TTTTAATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp AAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATTAAAAACTGTAACACTATTTTaGGGATTGACCTGCCGAACA +
Preference number: 4 (lower is better)
Translates to: KKSCTRWILHGVSCTRLKTVTLF*GLTCRT
Trigger: TGTTCGGCAGGTCAATCCCCAAAATAGTGTTACAGT...TTTTAATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp TATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATAAATCTTGCACAAGGTaGATTTTACATGGGGTATCA +
Preference number: 4 (lower is better)
Translates to: YTHICPRNLAQGGFYMGYKSCTR*ILHGVS
Trigger: TGATACCCCATGTAAAATCCACCTTGTGCAAGATTT...ATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp GAAACTAAAAAGGTAACCGTGGAGTGGAAACTGCTACTAGAAAGTCTGTTATCAAAAATATTTATTATCTaGCAATGGGGATGGGAGTGG +
Preference number: 4 (lower is better)
Translates to: ETKKVTVEWKLLLESLLSKIFII*QWGWEW
Trigger: CCACTCCCATCCCCATTGCCAGATAATAAATATTTT...TGATAACAGACTTTCTAGTAGCAGTTTCCACTCCACGGTTACCTTTTTAGTTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000536444.5
CDS-3UTR CCA 90 bp TGGTGGGCACAATCTAATCAGCTGTCAATGAATACAAAGCAGGCAGAAAAACATGAACTACATGTATCTTaGGGCCATATACAAGAAAAA +
Preference number: 4 (lower is better)
Translates to: WWAQSNQLSMNTKQAEKHELHVS*GHIQEK
Trigger: TTTTTCTTGTATATGGCCCCAAGATACATGTAGTTC...ATGTTTTTCTGCCTGCTTTGTATTCATTGACAGCTGATTAGATTGTGCCCACCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543189.5
3UTR CAA 72 bp AGAGATGAGGATACCACAGGCATTACTTTGTTGACCTaGTACAGTACTGGAAAGTTCATGAAACAAGATAAA +
Preference number: 4 (lower is better)
Translates to: RDEDTTGITLLT*YSTGKFMKQDK
Trigger: TTTATCTTGTTTCATGAACTTTCCAGTACTGTACAAGGTCAACAAAGTAATGCCTGTGGTATCCTCATCTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261168.8
ENST00000536444.5
3UTR CAA 72 bp TTTTCTCAGCCACTTTCCATATCTTTAAGACTCTCATaGAAGGCTATCCTTTACCATGATTTCCATCATCTG +
Preference number: 4 (lower is better)
Translates to: FSQPLSISLRLS*KAILYHDFHHL
Trigger: CAGATGATGGAAATCATGGTAAAGGATAGCCTTCAATGAGAGTCTTAAAGATATGGAAAGTGGCTGAGAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535738.1
ENST00000543189.5
CDS-3UTR TCA 90 bp AAATGTAGTGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTATTCAGGAGGTCGATCTaGACAAATAGTTGTATCATC +
Preference number: 4 (lower is better)
Translates to: KCSVYTHLSKKSCTRWILFRRSI*TNSCII
Trigger: GATGATACAACTATTTGTTCAGATCGACCTCCTGAA...TAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACACTACATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR TCA 90 bp AAATGTAGTGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACAGCTGCTTTCTTACTaGCAGAAGCATCTATTGTTT +
Preference number: 4 (lower is better)
Translates to: KCSVYTHLSKKSCTRWILQLLSY*QKHLLF
Trigger: AAACAATAGATGCTTCTGTCAGTAAGAAAGCAGCTG...TAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACACTACATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR GCA 90 bp AAATGTAGTGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTATTCATCCTCAGAAGGTaGAAGCTTTTCCAAAATAGG +
Preference number: 4 (lower is better)
Translates to: KCSVYTHLSKKSCTRWILFILRR*KLFQNR
Trigger: CCTATTTTGGAAAAGCTTGCACCTTCTGAGGATGAA...TAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACACTACATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR GCA 90 bp AGAATCATGCCAGTTACACATCTCAAATCCTTTGATCTACTTACTTCGTACTTTTTCATCCTCAGAAGGTaGAAGCTTTTCCAAAATAGG +
Preference number: 4 (lower is better)
Translates to: RIMPVTHLKSFDLLTSYFFILRR*KLFQNR
Trigger: CCTATTTTGGAAAAGCTTGCACCTTCTGAGGATGAA...AAAGTACGAAGTAAGTAGATCAAAGGATTTGAGATGTGTAACTGGCATGATTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000536444.5
ENST00000544627.5
CDS-3UTR GCA 90 bp AAATGTAGTGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTATCAAATACAGCACACTaGAGCGCACACAATTTTTCT +
Preference number: 4 (lower is better)
Translates to: KCSVYTHLSKKSCTRWILSNTAH*SAHNFS
Trigger: AGAAAAATTGTGTGCGCTGCAGTGTGCTGTATTTGA...TAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACACTACATTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR GCA 90 bp AAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATTAAAAACTGTAGGTGGGCTTTaGACAGAAATGAATTCAACA +
Preference number: 4 (lower is better)
Translates to: KKSCTRWILHGVSCTRLKTVGGL*TEMNST
Trigger: TGTTGAATTCATTTCTGTGCAAAGCCCACCTACAGT...TTTTAATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR GCA 90 bp AATGAAAATGGGAGACTCCAATGCAATAACACCTACATAAGGAAAAACACACATATTGCTGTTCTGTTCTaGAGCAGACGAAGTACTAAA +
Preference number: 4 (lower is better)
Translates to: NENGRLQCNNTYIRKNTHIAVLF*SRRSTK
Trigger: TTTAGTACTTCGTCTGCTGCAGAACAGAACAGCAAT...ATGTGTGTTTTTCCTTATGTAGGTGTTATTGCATTGGAGTCTCCCATTTTCATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536444.5
ENST00000544627.5
CDS-3UTR GCA 90 bp TATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATTACCTACACAAATATTaGCAGGCTAAAAATGTAGCA +
Preference number: 4 (lower is better)
Translates to: YTHICPRNLAQGGFYMGYYLHKY*QAKNVA
Trigger: TGCTACATTTTTAGCCTGGCAATATTTGTGTAGGTA...ATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000536444.5
CDS-3UTR GCA 90 bp AAATGTAGTGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTAACAAACATCCTACATTaGAGGTTGCAGTATCAGGTT +
Preference number: 4 (lower is better)
Translates to: KCSVYTHLSKKSCTRWILTNILH*RLQYQV
Trigger: AACCTGATACTGCAACCTGCAATGTAGGATGTTTGT...TAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACACTACATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536444.5
CDS-3UTR GCA 90 bp TACACTGCAGAATGGCTAAATCTAGCTGACATATGCATGATCTCACATACTTACAACATGTTTGAAATATaGATACACTGCAGAATGGCT +
Preference number: 4 (lower is better)
Translates to: YTAEWLNLADICMISHTYNMFEI*IHCRMA
Trigger: AGCCATTCTGCAGTGTATGCATATTTCAAACATGTT...GTAAGTATGTGAGATCATGCATATGTCAGCTAGATTTAGCCATTCTGCAGTGTA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR CCA 90 bp AACAAATGTAGTGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTAGGCAGTTTAGAGACTaGTTCTGGAGTTATATTATG +
Preference number: 4 (lower is better)
Translates to: NKCSVYTHLSKKSCTRWIRQFRD*FWSYIM
Trigger: CATAATATAACTCCAGAACCAGTCTCTAAACTGCCT...AATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACACTACATTTGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp ACATATCAACATTGCAACCACTGCAGGTCAAAACATATACATGCAGATATAGACAACTGGTACAGACTTTaGTTCAAAGGTACGATCAAA +
Preference number: 4 (lower is better)
Translates to: TYQHCNHCRSKHIHADIDNWYRL*FKGTIK
Trigger: TTTGATCGTACCTTTGAACCAAAGTCTGTACCAGTT...GTCTATATCTGCATGTATATGTTTTGACCTGCAGTGGTTGCAATGTTGATATGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536444.5
CDS-3UTR CCA 90 bp AAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATTAAAAGTCAATTTCAGGAACTaGTTCACAAACTGGTACAGA +
Preference number: 4 (lower is better)
Translates to: KKSCTRWILHGVSCTRLKVNFRN*FTNWYR
Trigger: TCTGTACCAGTTTGTGAACCAGTTCCTGAAATTGAC...TTTTAATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp AATGAAAATGGGAGACTCCAATGCAATAACACCTACATAAGGAAAAACACACATCAGAAAGGCTTCTTTTaGCAAACTCTCACTACTTTC +
Preference number: 4 (lower is better)
Translates to: NENGRLQCNNTYIRKNTHQKGFF*QTLTTF
Trigger: GAAAGTAGTGAGAGTTTGCCAAAAGAAGCCTTTCTG...ATGTGTGTTTTTCCTTATGTAGGTGTTATTGCATTGGAGTCTCCCATTTTCATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000536444.5
ENST00000544627.5
CDS-3UTR CCA 90 bp AAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATTAAAAACTTTCTACTTCTGCTaGAGAGCACGTTTCATTTTG +
Preference number: 4 (lower is better)
Translates to: KKSCTRWILHGVSCTRLKTFYFC*RARFIL
Trigger: CAAAATGAAACGTGCTCTCCAGCAGAAGTAGAAAGT...TTTTAATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp AACAAATGTAGTGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTCAACATTGCCAGATaGTTGATTAGTCACCAAAGT +
Preference number: 4 (lower is better)
Translates to: NKCSVYTHLSKKSCTRWIFNIAR*LISHQS
Trigger: ACTTTGGTGACTAATCAACCATCTGGCAATGTTGAA...AATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACACTACATTTGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp AAATGTAGTGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTAAGAAGGAACGTTGTTTaGTTTAGTGGGATTTGGCAA +
Preference number: 4 (lower is better)
Translates to: KCSVYTHLSKKSCTRWILRRNVV*FSGIWQ
Trigger: TTGCCAAATCCCACTAAACCAAACAACGTTCCTTCT...TAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACACTACATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR TCA 90 bp GTGATAAAACAACAAAATCTTAGGATGTTGAGGATACTGAATTGGCCCAAGAAAATTGTCCATGTCTTCTaGTTTAGAACGTTTTCGTCT +
Preference number: 4 (lower is better)
Translates to: VIKQQNLRMLRILNWPKKIVHVF*FRTFSS
Trigger: AGACGAAAACGTTCTAAATCAGAAGACATGGACAAT...TTTCTTGGGCCAATTCAGTATCCTCAACATCCTAAGATTTTGTTGTTTTATCAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000536444.5
CDS-3UTR TCA 90 bp AATGAAAATGGGAGACTCCAATGCAATAACACCTACATAAGGAAAAACACACATGCAAATACTGGGACTTaGCTTTTCTGGAAATTAGAA +
Preference number: 4 (lower is better)
Translates to: NENGRLQCNNTYIRKNTHANTGT*LFWKLE
Trigger: TTCTAATTTCCAGAAAAGTCAAGTCCCAGTATTTGC...ATGTGTGTTTTTCCTTATGTAGGTGTTATTGCATTGGAGTCTCCCATTTTCATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000536444.5
CDS-3UTR TCA 90 bp TTTCACCTAATTAACAACTCAGGAGACCAGACAAAAGAAACAACAAATAGATCCCTAACAAACGCTTCATaGGAATTGCTGATTTTTGTG +
Preference number: 4 (lower is better)
Translates to: FHLINNSGDQTKETTNRSLTNAS*ELLIFV
Trigger: CACAAAAATCAGCAATTCTCATGAAGCGTTTGTTAG...GGATCTATTTGTTGTTTCTTTTGTCTGGTCTCCTGAGTTGTTAATTAGGTGAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536444.5
CDS-3UTR CCA 90 bp AATGAAAATGGGAGACTCCAATGCAATAACACCTACATAAGGAAAAACACACATAACTGGTACAGACTTTaGTTCAAAGGTACGATCAAA +
Preference number: 4 (lower is better)
Translates to: NENGRLQCNNTYIRKNTHNWYRL*FKGTIK
Trigger: TTTGATCGTACCTTTGAACCAAAGTCTGTACCAGTT...ATGTGTGTTTTTCCTTATGTAGGTGTTATTGCATTGGAGTCTCCCATTTTCATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536444.5
ENST00000544627.5
CDS-3UTR CCA 90 bp CAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATTAAATCATTCTTTTCACCTTaGTCAATTTCCATACTGCTA +
Preference number: 4 (lower is better)
Translates to: QEILHKVDFTWGIMHKIKSFFSP*SISILL
Trigger: TAGCAGTATGGAAATTGACCAAGGTGAAAAGAATGA...TTTAATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp TTTCACCTAATTAACAACTCAGGAGACCAGACAAAAGAAACAACAAATAGATCCTTCAACATTGCCAGATaGTTGATTAGTCACCAAAGT +
Preference number: 4 (lower is better)
Translates to: FHLINNSGDQTKETTNRSFNIAR*LISHQS
Trigger: ACTTTGGTGACTAATCAACCATCTGGCAATGTTGAA...GGATCTATTTGTTGTTTCTTTTGTCTGGTCTCCTGAGTTGTTAATTAGGTGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536444.5
ENST00000544627.5
CDS-3UTR CCA 90 bp AAATGTAGTGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTATGTTTACAACATATGTaGTTGTTTGAGGCACTCGAA +
Preference number: 4 (lower is better)
Translates to: KCSVYTHLSKKSCTRWILCLQHM*LFEALE
Trigger: TTCGAGTGCCTCAAACAACCACATATGTTGTAAACA...TAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACACTACATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CCA 90 bp AGAATCATGCCAGTTACACATCTCAAATCCTTTGATCTACTTACTTCGTACTTTTGTTTACAACATATGTaGTTGTTTGAGGCACTCGAA +
Preference number: 4 (lower is better)
Translates to: RIMPVTHLKSFDLLTSYFCLQHM*LFEALE
Trigger: TTCGAGTGCCTCAAACAACCACATATGTTGTAAACA...AAAGTACGAAGTAAGTAGATCAAAGGATTTGAGATGTGTAACTGGCATGATTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536444.5
ENST00000544627.5
3UTR CAA 72 bp TTTGTAGACAGGAATAATCTTGAACACATATCAACATaGCAACCACTGCAGGTCAAAACATATACATGCAGA +
Preference number: 4 (lower is better)
Translates to: FVDRNNLEHIST*QPLQVKTYTCR
Trigger: TCTGCATGTATATGTTTTGACCTGCAGTGGTTGCAATGTTGATATGTGTTCAAGATTATTCCTGTCTACAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261168.8
ENST00000536444.5
CDS-3UTR GCA 90 bp AAATGTAGTGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTAGTCAAAACATATACATaGAGATATAGACAGGTGTTC +
Preference number: 4 (lower is better)
Translates to: KCSVYTHLSKKSCTRWILVKTYT*RYRQVF
Trigger: GAACACCTGTCTATATCTGCATGTATATGTTTTGAC...TAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACACTACATTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536444.5
CDS-3UTR CCA 90 bp AAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATTAAAAATTTGTCTCATCGATTaGAAGGAGAGATGTTTTAGA +
Preference number: 4 (lower is better)
Translates to: KKSCTRWILHGVSCTRLKICLID*KERCFR
Trigger: TCTAAAACATCTCTCCTTCCAATCGATGAGACAAAT...TTTTAATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS CCA 90 bp CAGTACTCCGGAGGCTGGATCTCCGGCATCCAGATCACCAGGGGCTaGATCACCAGAAACTGGTTCAGCAGGCAGTTTAGAGACTGGTTC +
Preference number: 5 (lower is better)
Translates to: QYSGGWISGIQITRG*ITRNWFSRQFRDWF
Trigger: GAACCAGTCTCTAAACTGCCTGCTGAACCAGTTTCTGGTGATCCAGCCCCTGGTGATCTGGATGCCGGAGATCCAGCCTCCGGAGTACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000261168.9
ENST00000396279.2
ENST00000534828.1
ENST00000536444.5
ENST00000537653.5
ENST00000539057.1
ENST00000539659.5
ENST00000540793.5
ENST00000541056.1
ENST00000541654.1
ENST00000542967.1
ENST00000543189.5
ENST00000544627.5
ENST00000545769.1
CDS CCA 90 bp GAACGCGTGCTAACTTCAAGTGTGGCTTCTGAGGCAGAGATGTGCTaGCAGCTTCTGGGGGCAGACGCTGTGGTTGTGGAGCTTCTGGTA +
Preference number: 5 (lower is better)
Translates to: ERVLTSSVASEAEMC*QLLGADAVVVELLV
Trigger: TACCAGAAGCTCCACAACCACAGCGTCTGCCCCCAGAAGCTGCCAGCACATCTCTGCCTCAGAAGCCACACTTGAAGTTAGCACGCGTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261168.9
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS CCA 90 bp AGCAGGAGCCTGCATAACAGTTCCTCGCAAGGGAGCCTGAGCTGGTaGTGCAGGAAGAGTTGTATAAACCACCTGGTGGTTTGCAGGAGC +
Preference number: 5 (lower is better)
Translates to: SRSLHNSSSQGSLSW*CRKSCINHLVVCRS
Trigger: GCTCCTGCAAACCACCAGGTGGTTTATACAACTCTTCCTGCACCACCAGCTCAGGCTCCCTTGCGAGGAACTGTTATGCAGGCTCCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261168.9
ENST00000535738.1
ENST00000536444.5
ENST00000540793.5
ENST00000543189.5
ENST00000544627.5
CDS TCA 90 bp GGCGTGGGGGCTCAGTATGCACTTGTGGTGGTCGGTGATGCACTGTaGGCTGAGGTCCTGTTGATCCCAGGGTTAGTCCATTGTTTACAA +
Preference number: 5 (lower is better)
Translates to: GVGAQYALVVVGDAL*AEVLLIPGLVHCLQ
Trigger: TTGTAAACAATGGACTAACCCTGGGATCAACAGGACCTCAGCTCACAGTGCATCACCGACCACCACAAGTGCATACTGAGCCCCCACGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261168.9
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS CCA 90 bp AACAGCAGGAGCCTGCATAACAGTTCCTCGCAAGGGAGCCTGAGCTaGTGGTGCAGGAAGAGTTGTATAAACCACCTGGTGGTTTGCAGG +
Preference number: 5 (lower is better)
Translates to: NSRSLHNSSSQGSLS*WCRKSCINHLVVCR
Trigger: CCTGCAAACCACCAGGTGGTTTATACAACTCTTCCTGCACCACCAGCTCAGGCTCCCTTGCGAGGAACTGTTATGCAGGCTCCTGCTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261168.9
ENST00000535738.1
ENST00000536444.5
ENST00000540793.5
ENST00000543189.5
ENST00000544627.5
CDS GCA 90 bp GTGTGCTGTTGGAACAGCCTGCACAGCAAGTGTTGTTCCCAATGGTaGAGCACTGGCAGTAGGGTTCCTTTGAATACTAGGACTGGGCAC +
Preference number: 5 (lower is better)
Translates to: VCCWNSLHSKCCSQW*STGSRVPLNTRTGH
Trigger: GTGCCCAGTCCTAGTATTCAAAGGAACCCTACTGCCAGTGCTGCACCATTGGGAACAACACTTGCTGTGCAGGCTGTTCCAACAGCACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000261168.9
ENST00000536444.5
ENST00000537653.5
ENST00000540793.5
ENST00000541654.1
ENST00000543189.5
ENST00000544627.5
CDS-3UTR CAA 90 bp TGCCCTTCGACACTGGACTCCAAATTCTTCAGTTTGGGGATTCAGTCTGGCTTTTGGCACCCCAGATGGTaGAAGAGGCGGTGCTGGTTG +
Preference number: 5 (lower is better)
Translates to: CPSTLDSKFFSLGIQSGFWHPRW*KRRCWL
Trigger: CAACCAGCACCGCCTCTTCAACCATCTGGGGTGCCA...AAAGCCAGACTGAATCCCCAAACTGAAGAATTTGGAGTCCAGTGTCGAAGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR CAA 90 bp GTTTGGGGATTCAGTCTGGCTTTCCTTGCTCAGCTTGCAGACAGCCTATTGAGGGGTTTGCAGGAGCTCTaGGTACAGGGAGTCTTGTGG +
Preference number: 5 (lower is better)
Translates to: VWGFSLAFLAQLADSLLRGLQEL*VQGVLW
Trigger: CCACAAGACTCCCTGTACCAAGAGCTCCTGCAAACC...CCTCAATAGGCTGTCTGCAAGCTGAGCAAGGAAAGCCAGACTGAATCCCCAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS GCA 90 bp CTGAGCTGGTGGTGCAGGAAGAGTTGTATAAACCACCTGGTGGTTTaGAGGAGCTCTTGGTACAGGGAGTCTTGTGGTCACCTGAGTTAC +
Preference number: 5 (lower is better)
Translates to: LSWWCRKSCINHLVV*RSSWYRESCGHLSY
Trigger: GTAACTCAGGTGACCACAAGACTCCCTGTACCAAGAGCTCCTGCAAACCACCAGGTGGTTTATACAACTCTTCCTGCACCACCAGCTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261168.9
ENST00000535738.1
ENST00000536444.5
ENST00000540793.5
ENST00000543189.5
ENST00000544627.5
CDS CCA 90 bp AGAGTGTGCTGTTGGAACAGCCTGCACAGCAAGTGTTGTTCCCAATaGTGCAGCACTGGCAGTAGGGTTCCTTTGAATACTAGGACTGGG +
Preference number: 5 (lower is better)
Translates to: RVCCWNSLHSKCCSQ*CSTGSRVPLNTRTG
Trigger: CCCAGTCCTAGTATTCAAAGGAACCCTACTGCCAGTGCTGCACCATTGGGAACAACACTTGCTGTGCAGGCTGTTCCAACAGCACACTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000261168.9
ENST00000536444.5
ENST00000537653.5
ENST00000540793.5
ENST00000541654.1
ENST00000543189.5
ENST00000544627.5
CDS-3UTR CAA 90 bp GTTTGGGGATTCAGTCTGGCTTTCCTTGCTCAGCTTGCAGACAGCCTATTGAGGAAACCACCTGGTGGTTaGCAGGAGCTCTTGGTACAG +
Preference number: 5 (lower is better)
Translates to: VWGFSLAFLAQLADSLLRKPPGG*QELLVQ
Trigger: CTGTACCAAGAGCTCCTGCAAACCACCAGGTGGTTT...CCTCAATAGGCTGTCTGCAAGCTGAGCAAGGAAAGCCAGACTGAATCCCCAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR CAA 90 bp TTCTTCAGTTTGGGGATTCAGTCTGGCTTTCCTTGCTCAGCTTGCAGACAGCCTTCAGTCTGGCTTTCCTaGCTCAGCTTGCAGACAGCC +
Preference number: 5 (lower is better)
Translates to: FFSLGIQSGFPCSACRQPSVWLS*LSLQTA
Trigger: GGCTGTCTGCAAGCTGAGCAAGGAAAGCCAGACTGA...AGGCTGTCTGCAAGCTGAGCAAGGAAAGCCAGACTGAATCCCCAAACTGAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR CAA 90 bp TTCTTCAGTTTGGGGATTCAGTCTGGCTTTCCTTGCTCAGCTTGCAGACAGCCTGGCAGTAGGGTTCCTTaGAATACTAGGACTGGGCAC +
Preference number: 5 (lower is better)
Translates to: FFSLGIQSGFPCSACRQPGSRVP*NTRTGH
Trigger: GTGCCCAGTCCTAGTATTCAAAGGAACCCTACTGCC...AGGCTGTCTGCAAGCTGAGCAAGGAAAGCCAGACTGAATCCCCAAACTGAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR CAA 90 bp TGCCCTTCGACACTGGACTCCAAATTCTTCAGTTTGGGGATTCAGTCTGGCTTTAAGAGGCGGTGCTGGTaGTATGGGTTGCAATGGTCG +
Preference number: 5 (lower is better)
Translates to: CPSTLDSKFFSLGIQSGFKRRCW*YGLQWS
Trigger: CGACCATTGCAACCCATACAACCAGCACCGCCTCTT...AAAGCCAGACTGAATCCCCAAACTGAAGAATTTGGAGTCCAGTGTCGAAGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR CAA 90 bp TCAGTTTGGGGATTCAGTCTGGCTTTCCTTGCTCAGCTTGCAGACAGCCTATTGTCTGAGATGGTCCACTaGTTGGCACCCCAGATGGTT +
Preference number: 5 (lower is better)
Translates to: SVWGFSLAFLAQLADSLLSEMVH*LAPQMV
Trigger: AACCATCTGGGGTGCCAACAAGTGGACCATCTCAGA...CAATAGGCTGTCTGCAAGCTGAGCAAGGAAAGCCAGACTGAATCCCCAAACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS TCA 90 bp TGGTGGTTTGCAGGAGCTCTTGGTACAGGGAGTCTTGTGGTCACCTaGGTTACTGGACGATGTGTTACATTCACGGTAGTTGGAGCTGTA +
Preference number: 5 (lower is better)
Translates to: WWFAGALGTGSLVVT*VTGRCVTFTVVGAV
Trigger: TACAGCTCCAACTACCGTGAATGTAACACATCGTCCAGTAACTCAGGTGACCACAAGACTCCCTGTACCAAGAGCTCCTGCAAACCACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261168.9
ENST00000535738.1
ENST00000536444.5
ENST00000540793.5
ENST00000543189.5
ENST00000544627.5
CDS GCA 90 bp TGGCACAGCTTCGATCCACCTCCAGGACACTCCATGACAGTACTATaGCATTTTGACTCTGAACGCGTGCTAACTTCAAGTGTGGCTTCT +
Preference number: 5 (lower is better)
Translates to: WHSFDPPPGHSMTVL*HFDSERVLTSSVAS
Trigger: AGAAGCCACACTTGAAGTTAGCACGCGTTCAGAGTCAAAATGGCATAGTACTGTCATGGAGTGTCCTGGAGGTGGATCGAAGCTGTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261168.9
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS CCA 90 bp TGGATCTCCGGCATCCAGATCACCAGGGGCTGGATCACCAGAAACTaGTTCAGCAGGCAGTTTAGAGACTGGTTCTGGAGTTATATTATG +
Preference number: 5 (lower is better)
Translates to: WISGIQITRGWITRN*FSRQFRDWFWSYIM
Trigger: CATAATATAACTCCAGAACCAGTCTCTAAACTGCCTGCTGAACCAGTTTCTGGTGATCCAGCCCCTGGTGATCTGGATGCCGGAGATCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000261168.9
ENST00000396279.2
ENST00000534828.1
ENST00000536444.5
ENST00000537653.5
ENST00000539057.1
ENST00000539659.5
ENST00000540793.5
ENST00000541056.1
ENST00000541654.1
ENST00000542967.1
ENST00000543189.5
ENST00000544627.5
ENST00000545769.1
CDS CCA 90 bp TGCAGGAAGAGTTGTATAAACCACCTGGTGGTTTGCAGGAGCTCTTaGTACAGGGAGTCTTGTGGTCACCTGAGTTACTGGACGATGTGT +
Preference number: 5 (lower is better)
Translates to: CRKSCINHLVVCRSS*YRESCGHLSYWTMC
Trigger: ACACATCGTCCAGTAACTCAGGTGACCACAAGACTCCCTGTACCAAGAGCTCCTGCAAACCACCAGGTGGTTTATACAACTCTTCCTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261168.9
ENST00000535738.1
ENST00000536444.5
ENST00000540793.5
ENST00000543189.5
ENST00000544627.5
CDS CCA 90 bp CACTGGGTTCCTCATGGTAAGCATAGAGATGGTAGCTATCAACAGTaGCACAGCTTCGATCCACCTCCAGGACACTCCATGACAGTACTA +
Preference number: 5 (lower is better)
Translates to: HWVPHGKHRDGSYQQ*HSFDPPPGHSMTVL
Trigger: TAGTACTGTCATGGAGTGTCCTGGAGGTGGATCGAAGCTGTGCCACTGTTGATAGCTACCATCTCTATGCTTACCATGAGGAACCCAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261168.9
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CAA 90 bp TGCCCTTCGACACTGGACTCCAAATTCTTCAGTTTGGGGATTCAGTCTGGCTTTTCCATTCTGAATCTTTaGGGGCGGAAGCTGAGGGAG +
Preference number: 5 (lower is better)
Translates to: CPSTLDSKFFSLGIQSGFSILNL*GRKLRE
Trigger: CTCCCTCAGCTTCCGCCCCAAAAGATTCAGAATGGA...AAAGCCAGACTGAATCCCCAAACTGAAGAATTTGGAGTCCAGTGTCGAAGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR CAA 90 bp TTCTTCAGTTTGGGGATTCAGTCTGGCTTTCCTTGCTCAGCTTGCAGACAGCCTGGTGATACTGGTGGGTaGGGTGGATGTTCATGTCTT +
Preference number: 5 (lower is better)
Translates to: FFSLGIQSGFPCSACRQPGDTGG*GGCSCL
Trigger: AAGACATGAACATCCACCCAACCCACCAGTATCACC...AGGCTGTCTGCAAGCTGAGCAAGGAAAGCCAGACTGAATCCCCAAACTGAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS TCA 90 bp CTGAGTAGTAGCAACTACAGTAGCTGTATTGGGTGCAGGAAGAACTaGCGTTGCTGTGAGGGAACCCGAAGTCACTGGAGTCTGCAATTT +
Preference number: 5 (lower is better)
Translates to: LSSSNYSSCIGCRKN*RCCEGTRSHWSLQF
Trigger: AAATTGCAGACTCCAGTGACTTCGGGTTCCCTCACAGCAACGTCAGTTCTTCCTGCACCCAATACAGCTACTGTAGTTGCTACTACTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000261168.9
ENST00000536444.5
ENST00000537653.5
ENST00000540793.5
ENST00000541654.1
ENST00000543189.5
ENST00000544627.5
CDS TCA 90 bp GCAAGTGTTGTTCCCAATGGTGCAGCACTGGCAGTAGGGTTCCTTTaGATACTAGGACTGGGCACAGAAGGAACGTTGTTTGGTTTAGTG +
Preference number: 5 (lower is better)
Translates to: ASVVPNGAALAVGFL*ILGLGTEGTLFGLV
Trigger: CACTAAACCAAACAACGTTCCTTCTGTGCCCAGTCCTAGTATTCAAAGGAACCCTACTGCCAGTGCTGCACCATTGGGAACAACACTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000261168.9
ENST00000536444.5
ENST00000537653.5
ENST00000540793.5
ENST00000541654.1
ENST00000543189.5
ENST00000544627.5
CDS-3UTR CAA 90 bp TTCTTCAGTTTGGGGATTCAGTCTGGCTTTCCTTGCTCAGCTTGCAGACAGCCTGTACACTGCTTCAAGTaGCTGACGATCACTCACTCT +
Preference number: 5 (lower is better)
Translates to: FFSLGIQSGFPCSACRQPVHCFK*LTITHS
Trigger: AGAGTGAGTGATCGTCAGCAACTTGAAGCAGTGTAC...AGGCTGTCTGCAAGCTGAGCAAGGAAAGCCAGACTGAATCCCCAAACTGAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR CAA 90 bp AGTGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGTGGCACCCCAGATGGTaGAAGAGGCGGTGCTGGTTG +
Preference number: 5 (lower is better)
Translates to: SVYTHLSKKSCTRWILHGWHPRW*KRRCWL
Trigger: CAACCAGCACCGCCTCTTCAACCATCTGGGGTGCCA...CCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CAA 90 bp TGCCCTTCGACACTGGACTCCAAATTCTTCAGTTTGGGGATTCAGTCTGGCTTTTTGGTACAGGGAGTCTaGTGGTCACCTGAGTTACTG +
Preference number: 5 (lower is better)
Translates to: CPSTLDSKFFSLGIQSGFLVQGV*WSPELL
Trigger: CAGTAACTCAGGTGACCACAAGACTCCCTGTACCAA...AAAGCCAGACTGAATCCCCAAACTGAAGAATTTGGAGTCCAGTGTCGAAGGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR CAA 90 bp TCTTCAGTTTGGGGATTCAGTCTGGCTTTCCTTGCTCAGCTTGCAGACAGCCTATTACTATTTTGGGGATaGACCTGCCGAACAGCAGGA +
Preference number: 5 (lower is better)
Translates to: SSVWGFSLAFLAQLADSLLLFWG*TCRTAG
Trigger: TCCTGCTGTTCGGCAGGTCAATCCCCAAAATAGTAA...TAGGCTGTCTGCAAGCTGAGCAAGGAAAGCCAGACTGAATCCCCAAACTGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS TCA 90 bp GTTGCTGTGAGGGAACCCGAAGTCACTGGAGTCTGCAATTTAGGTTaGCTACTGACAACTGCTGGAGGAGTGACAAGATTGGTTGAAGAT +
Preference number: 5 (lower is better)
Translates to: VAVREPEVTGVCNLG*LLTTAGGVTRLVED
Trigger: ATCTTCAACCAATCTTGTCACTCCTCCAGCAGTTGTCAGTAGTCAACCTAAATTGCAGACTCCAGTGACTTCGGGTTCCCTCACAGCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000261168.9
ENST00000536444.5
ENST00000537653.5
ENST00000540793.5
ENST00000541654.1
ENST00000543189.5
ENST00000544627.5
CDS CCA 90 bp GGGCACAGAAGGAACGTTGTTTGGTTTAGTGGGATTTGGCAAGGATaGCAAGGATACTGGATTTTTGGTAAGACCACTCACTGTAGGTGG +
Preference number: 5 (lower is better)
Translates to: GHRRNVVWFSGIWQG*QGYWIFGKTTHCRW
Trigger: CCACCTACAGTGAGTGGTCTTACCAAAAATCCAGTATCCTTGCCATCCTTGCCAAATCCCACTAAACCAAACAACGTTCCTTCTGTGCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000261168.9
ENST00000536444.5
ENST00000537653.5
ENST00000540793.5
ENST00000541654.1
ENST00000543189.5
ENST00000544627.5
CDS-3UTR CAA 90 bp GTTTGGGGATTCAGTCTGGCTTTCCTTGCTCAGCTTGCAGACAGCCTATTGAGGAGGTACGATCAAAGGTaGATTCAGAAGTCAGCTCAT +
Preference number: 5 (lower is better)
Translates to: VWGFSLAFLAQLADSLLRRYDQR*IQKSAH
Trigger: ATGAGCTGACTTCTGAATCAACCTTTGATCGTACCT...CCTCAATAGGCTGTCTGCAAGCTGAGCAAGGAAAGCCAGACTGAATCCCCAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR CAA 90 bp TTCTTCAGTTTGGGGATTCAGTCTGGCTTTCCTTGCTCAGCTTGCAGACAGCCTTGTATTCACAGGAGTTaGAAAGGATGGTGGTGCACT +
Preference number: 5 (lower is better)
Translates to: FFSLGIQSGFPCSACRQPCIHRS*KGWWCT
Trigger: AGTGCACCACCATCCTTTCAAACTCCTGTGAATACA...AGGCTGTCTGCAAGCTGAGCAAGGAAAGCCAGACTGAATCCCCAAACTGAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR CAA 90 bp TTCTTCAGTTTGGGGATTCAGTCTGGCTTTCCTTGCTCAGCTTGCAGACAGCCTAGTCTGCAATTTAGGTaGACTACTGACAACTGCTGG +
Preference number: 5 (lower is better)
Translates to: FFSLGIQSGFPCSACRQPSLQFR*TTDNCW
Trigger: CCAGCAGTTGTCAGTAGTCAACCTAAATTGCAGACT...AGGCTGTCTGCAAGCTGAGCAAGGAAAGCCAGACTGAATCCCCAAACTGAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR CAA 90 bp TGCCCTTCGACACTGGACTCCAAATTCTTCAGTTTGGGGATTCAGTCTGGCTTTACTACAGTAGCTGTATaGGGTGCAGGAAGAACTGAC +
Preference number: 5 (lower is better)
Translates to: CPSTLDSKFFSLGIQSGFTTVAV*GAGRTD
Trigger: GTCAGTTCTTCCTGCACCCAATACAGCTACTGTAGT...AAAGCCAGACTGAATCCCCAAACTGAAGAATTTGGAGTCCAGTGTCGAAGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR CAA 90 bp TCTTCAGTTTGGGGATTCAGTCTGGCTTTCCTTGCTCAGCTTGCAGACAGCCTACACTGTAGGTGGGCTTaGCACAGAAATGAATTCAAC +
Preference number: 5 (lower is better)
Translates to: SSVWGFSLAFLAQLADSLHCRWA*HRNEFN
Trigger: GTTGAATTCATTTCTGTGCAAAGCCCACCTACAGTG...TAGGCTGTCTGCAAGCTGAGCAAGGAAAGCCAGACTGAATCCCCAAACTGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR CAA 90 bp TCTTCAGTTTGGGGATTCAGTCTGGCTTTCCTTGCTCAGCTTGCAGACAGCCTAGGCACAGAAGGAACGTaGTTTGGTTTAGTGGGATTT +
Preference number: 5 (lower is better)
Translates to: SSVWGFSLAFLAQLADSLGTEGT*FGLVGF
Trigger: AAATCCCACTAAACCAAACAACGTTCCTTCTGTGCC...TAGGCTGTCTGCAAGCTGAGCAAGGAAAGCCAGACTGAATCCCCAAACTGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR CAA 90 bp CACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCAGGTTTGCAGGAGCTCTaGGTACAGGGAGTCTTGTGG +
Preference number: 5 (lower is better)
Translates to: HICPRNLAQGGFYMGYHAGLQEL*VQGVLW
Trigger: CCACAAGACTCCCTGTACCAAGAGCTCCTGCAAACC...TGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CAA 90 bp AGTGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGGGCTCAGTATGCACTaGTGGTGGTCGGTGATGCAC +
Preference number: 5 (lower is better)
Translates to: SVYTHLSKKSCTRWILHGGLSMH*WWSVMH
Trigger: GTGCATCACCGACCACCACAAGTGCATACTGAGCCC...CCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACACT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CAA 90 bp TGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATGGCAGAGTTTCGCTCTaGTCTCCCAGGATGGAGTGC +
Preference number: 5 (lower is better)
Translates to: CPRNLAQGGFYMGYHAQDGRVSL*SPRMEC
Trigger: GCACTCCATCCTGGGAGACAAGAGCGAAACTCTGCC...ATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536444.5
CDS TCA 90 bp TTCACAAACTGGTACAGACTTTGGTTCAAAGGTACGATCAAAGGTTaGTTCAGAAGTCAGCTCATCAGAGGCCAGTTCACCAGTGGCCAG +
Preference number: 5 (lower is better)
Translates to: FTNWYRLWFKGTIKG*FRSQLIRGQFTSGQ
Trigger: CTGGCCACTGGTGAACTGGCCTCTGATGAGCTGACTTCTGAATCAACCTTTGATCGTACCTTTGAACCAAAGTCTGTACCAGTTTGTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000261168.9
ENST00000396279.2
ENST00000536444.5
ENST00000537653.5
ENST00000539659.5
ENST00000540793.5
ENST00000541654.1
ENST00000543189.5
ENST00000544627.5
CDS CCA 90 bp CAGGAGTTTGAAAGGATGGTGGTGCACTCTCGCTTACATTTCTTTTaGACTCCAGCATCTGTCTCACTGTGCCTGCATTTCTGTAAGACA +
Preference number: 5 (lower is better)
Translates to: QEFERMVVHSRLHFF*TPASVSLCLHFCKT
Trigger: TGTCTTACAGAAATGCAGGCACAGTGAGACAGATGCTGGAGTCCAAAAGAAATGTAAGCGAGAGTGCACCACCATCCTTTCAAACTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261168.9
ENST00000536444.5
ENST00000537653.5
ENST00000540793.5
ENST00000543189.5
ENST00000544627.5
CDS-3UTR CAA 90 bp TTCTTCAGTTTGGGGATTCAGTCTGGCTTTCCTTGCTCAGCTTGCAGACAGCCTAGTTCTTCTTTGACCTaGTACACTGCTTCAAGTTGC +
Preference number: 5 (lower is better)
Translates to: FFSLGIQSGFPCSACRQPSSSLT*YTASSC
Trigger: GCAACTTGAAGCAGTGTACAAGGTCAAAGAAGAACT...AGGCTGTCTGCAAGCTGAGCAAGGAAAGCCAGACTGAATCCCCAAACTGAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR CAA 90 bp GTTTGGGGATTCAGTCTGGCTTTCCTTGCTCAGCTTGCAGACAGCCTATTGAGGTCTCCATTTTCATGGTaGCCATTTAACAGCTTGACA +
Preference number: 5 (lower is better)
Translates to: VWGFSLAFLAQLADSLLRSPFSW*PFNSLT
Trigger: TGTCAAGCTGTTAAATGGCAACCATGAAAATGGAGA...CCTCAATAGGCTGTCTGCAAGCTGAGCAAGGAAAGCCAGACTGAATCCCCAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR CAA 90 bp GTTTGGGGATTCAGTCTGGCTTTCCTTGCTCAGCTTGCAGACAGCCTATTGAGGTTCTTAAGATCTTCTTaGGCTGCTTCAAAGCGTTTG +
Preference number: 5 (lower is better)
Translates to: VWGFSLAFLAQLADSLLRFLRSS*AASKRL
Trigger: CAAACGCTTTGAAGCAGCCAAAGAAGATCTTAAGAA...CCTCAATAGGCTGTCTGCAAGCTGAGCAAGGAAAGCCAGACTGAATCCCCAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR CAA 90 bp TCTTCAGTTTGGGGATTCAGTCTGGCTTTCCTTGCTCAGCTTGCAGACAGCCTAGGAGGAGTGACAAGATaGGTTGAAGATACTGTATTC +
Preference number: 5 (lower is better)
Translates to: SSVWGFSLAFLAQLADSLGGVTR*VEDTVF
Trigger: GAATACAGTATCTTCAACCAATCTTGTCACTCCTCC...TAGGCTGTCTGCAAGCTGAGCAAGGAAAGCCAGACTGAATCCCCAAACTGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR CAA 90 bp CTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGAGGCAGTAGGGTTCCTTaGAATACTAGGACTGGGCAC +
Preference number: 5 (lower is better)
Translates to: LSKKSCTRWILHGVSCTRGSRVP*NTRTGH
Trigger: GTGCCCAGTCCTAGTATTCAAAGGAACCCTACTGCC...TCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CAA 90 bp TGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATCCTGCACAGCAAGTGTaGTTCCCAATGGTGCAGCAC +
Preference number: 5 (lower is better)
Translates to: CPRNLAQGGFYMGYHAQDPAQQV*FPMVQH
Trigger: GTGCTGCACCATTGGGAACAACACTTGCTGTGCAGG...ATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CAA 90 bp TGGTGGGCACAATCTAATCAGCTGTCAATGAATACAAAGCAGGCAGAAAAACATCCTGCACAGCAAGTGTaGTTCCCAATGGTGCAGCAC +
Preference number: 5 (lower is better)
Translates to: WWAQSNQLSMNTKQAEKHPAQQV*FPMVQH
Trigger: GTGCTGCACCATTGGGAACAACACTTGCTGTGCAGG...ATGTTTTTCTGCCTGCTTTGTATTCATTGACAGCTGATTAGATTGTGCCCACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR CAA 90 bp TGCCCTTCGACACTGGACTCCAAATTCTTCAGTTTGGGGATTCAGTCTGGCTTTAGAAGTCCTTGTGGCTaGTACAATAGAGTGTGCTGT +
Preference number: 5 (lower is better)
Translates to: CPSTLDSKFFSLGIQSGFRSPCG*YNRVCC
Trigger: ACAGCACACTCTATTGTACAAGCCACAAGGACTTCT...AAAGCCAGACTGAATCCCCAAACTGAAGAATTTGGAGTCCAGTGTCGAAGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR CAA 90 bp AACAAATGTAGTGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTGGCACCCCAGATGGTaGAAGAGGCGGTGCTGGTTG +
Preference number: 5 (lower is better)
Translates to: NKCSVYTHLSKKSCTRWIWHPRW*KRRCWL
Trigger: CAACCAGCACCGCCTCTTCAACCATCTGGGGTGCCA...AATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACACTACATTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CAA 90 bp CTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATCTGAGATGGTCCACTaGTTGGCACCCCAGATGGTT +
Preference number: 5 (lower is better)
Translates to: LSKKSCTRWILHGVSCTRSEMVH*LAPQMV
Trigger: AACCATCTGGGGTGCCAACAAGTGGACCATCTCAGA...TCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CAA 90 bp GTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTAGGTTTGCAGGAGCTCTaGGTACAGGGAGTCTTGTGG +
Preference number: 5 (lower is better)
Translates to: VYTHLSKKSCTRWILHGVGLQEL*VQGVLW
Trigger: CCACAAGACTCCCTGTACCAAGAGCTCCTGCAAACC...TACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CAA 90 bp CTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGAAAACCACCTGGTGGTTaGCAGGAGCTCTTGGTACAG +
Preference number: 5 (lower is better)
Translates to: LSKKSCTRWILHGVSCTRKPPGG*QELLVQ
Trigger: CTGTACCAAGAGCTCCTGCAAACCACCAGGTGGTTT...TCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CAA 90 bp TCTTCAGTTTGGGGATTCAGTCTGGCTTTCCTTGCTCAGCTTGCAGACAGCCTAAAATCTCTTACTATTTaGGGGATTGACCTGCCGAAC +
Preference number: 5 (lower is better)
Translates to: SSVWGFSLAFLAQLADSLKSLTI*GIDLPN
Trigger: GTTCGGCAGGTCAATCCCCAAAATAGTAAGAGATTT...TAGGCTGTCTGCAAGCTGAGCAAGGAAAGCCAGACTGAATCCCCAAACTGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR CAA 90 bp AACACCCACACATATTCCCCAGCCTCAAAACTAAAGCAAGGTACACATTTACATAAAGCCCCTCCCACTTaGTCAGCCTGCAGGAAACTG +
Preference number: 5 (lower is better)
Translates to: NTHTYSPASKLKQGTHLHKAPPT*SACRKL
Trigger: CAGTTTCCTGCAGGCTGACAAAGTGGGAGGGGCTTT...ATGTAAATGTGTACCTTGCTTTAGTTTTGAGGCTGGGGAATATGTGTGGGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000544627.5
CDS GCA 90 bp TGCAAAGTAGTATTTGCTACCAGATACAAACTGGGTGAGAGTACATaGCATGGGCAAGGGAAGTGCCTTGACTTCCCCAATCTTTTTCCA +
Preference number: 5 (lower is better)
Translates to: CKVVFATRYKLGEST*HGQGKCLDFPNLFP
Trigger: TGGAAAAAGATTGGGGAAGTCAAGGCACTTCCCTTGCCCATGGCATGTACTCTCACCCAGTTTGTATCTGGTAGCAAATACTACTTTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261168.9
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS CCA 90 bp AACGTTGTTTGGTTTAGTGGGATTTGGCAAGGATGGCAAGGATACTaGATTTTTGGTAAGACCACTCACTGTAGGTGGGCTTTGCACAGA +
Preference number: 5 (lower is better)
Translates to: NVVWFSGIWQGWQGY*IFGKTTHCRWALHR
Trigger: TCTGTGCAAAGCCCACCTACAGTGAGTGGTCTTACCAAAAATCCAGTATCCTTGCCATCCTTGCCAAATCCCACTAAACCAAACAACGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000261168.9
ENST00000536444.5
ENST00000537653.5
ENST00000540793.5
ENST00000541654.1
ENST00000543189.5
ENST00000544627.5
CDS-3UTR CAA 90 bp AGTGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGTCCATTCTGAATCTTTaGGGGCGGAAGCTGAGGGAG +
Preference number: 5 (lower is better)
Translates to: SVYTHLSKKSCTRWILHGSILNL*GRKLRE
Trigger: CTCCCTCAGCTTCCGCCCCAAAAGATTCAGAATGGA...CCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536444.5
CDS-3UTR CAA 90 bp TCTTCAGTTTGGGGATTCAGTCTGGCTTTCCTTGCTCAGCTTGCAGACAGCCTAAAACTGGTACAGACTTaGGTTCAAAGGTACGATCAA +
Preference number: 5 (lower is better)
Translates to: SSVWGFSLAFLAQLADSLKLVQT*VQRYDQ
Trigger: TTGATCGTACCTTTGAACCAAAGTCTGTACCAGTTT...TAGGCTGTCTGCAAGCTGAGCAAGGAAAGCCAGACTGAATCCCCAAACTGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR CAA 90 bp TTCTTCAGTTTGGGGATTCAGTCTGGCTTTCCTTGCTCAGCTTGCAGACAGCCTAGAGCACGTTTCATTTaGCGATATAACTTCAGACTC +
Preference number: 5 (lower is better)
Translates to: FFSLGIQSGFPCSACRQPRARFI*RYNFRL
Trigger: GAGTCTGAAGTTATATCGCAAAATGAAACGTGCTCT...AGGCTGTCTGCAAGCTGAGCAAGGAAAGCCAGACTGAATCCCCAAACTGAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR CAA 90 bp GTTTGGGGATTCAGTCTGGCTTTCCTTGCTCAGCTTGCAGACAGCCTATTGAGGTCTTCTTCCTCAGGTTaGTTGTCCTTTTCATTACTT +
Preference number: 5 (lower is better)
Translates to: VWGFSLAFLAQLADSLLRSSSSG*LSFSLL
Trigger: AAGTAATGAAAAGGACAACAAACCTGAGGAAGAAGA...CCTCAATAGGCTGTCTGCAAGCTGAGCAAGGAAAGCCAGACTGAATCCCCAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR CAA 90 bp GTTTGGGGATTCAGTCTGGCTTTCCTTGCTCAGCTTGCAGACAGCCTATTGAGGCCACTGTATAACCTTTaGAAGTTTCTGGTTAATGTC +
Preference number: 5 (lower is better)
Translates to: VWGFSLAFLAQLADSLLRPLYNL*KFLVNV
Trigger: GACATTAACCAGAAACTTCAAAAGGTTATACAGTGG...CCTCAATAGGCTGTCTGCAAGCTGAGCAAGGAAAGCCAGACTGAATCCCCAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR CAA 90 bp GGAACACCTCTCTGTGAGGCAAATGGTATCTCAACAAATACCGACTTTTCAAGGGTTAACCTGGCTATCTaGGCCTGTAGTTCAGTGAGA +
Preference number: 5 (lower is better)
Translates to: GTPLCEANGISTNTDFSRVNLAI*ACSSVR
Trigger: TCTCACTGAACTACAGGCCAAGATAGCCAGGTTAAC...CCTTGAAAAGTCGGTATTTGTTGAGATACCATTTGCCTCACAGAGAGGTGTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536444.5
CDS-3UTR CAA 90 bp CTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGAGGTGATACTGGTGGGTaGGGTGGATGTTCATGTCTT +
Preference number: 5 (lower is better)
Translates to: LSKKSCTRWILHGVSCTRGDTGG*GGCSCL
Trigger: AAGACATGAACATCCACCCAACCCACCAGTATCACC...TCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CAA 90 bp AAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATTAAAATGGCACCCCAGATGGTaGAAGAGGCGGTGCTGGTTG +
Preference number: 5 (lower is better)
Translates to: KKSCTRWILHGVSCTRLKWHPRW*KRRCWL
Trigger: CAACCAGCACCGCCTCTTCAACCATCTGGGGTGCCA...TTTTAATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CAA 90 bp AACACCCACACATATTCCCCAGCCTCAAAACTAAAGCAAGGTACACATTTACATTCTGAGATGGTCCACTaGTTGGCACCCCAGATGGTT +
Preference number: 5 (lower is better)
Translates to: NTHTYSPASKLKQGTHLHSEMVH*LAPQMV
Trigger: AACCATCTGGGGTGCCAACAAGTGGACCATCTCAGA...ATGTAAATGTGTACCTTGCTTTAGTTTTGAGGCTGGGGAATATGTGTGGGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000536444.5
ENST00000544627.5
CDS-3UTR CAA 90 bp CACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCATTGGTACAGGGAGTCTaGTGGTCACCTGAGTTACTG +
Preference number: 5 (lower is better)
Translates to: HICPRNLAQGGFYMGYHALVQGV*WSPELL
Trigger: CAGTAACTCAGGTGACCACAAGACTCCCTGTACCAA...TGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CAA 90 bp GTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTAAAACCACCTGGTGGTTaGCAGGAGCTCTTGGTACAG +
Preference number: 5 (lower is better)
Translates to: VYTHLSKKSCTRWILHGVKPPGG*QELLVQ
Trigger: CTGTACCAAGAGCTCCTGCAAACCACCAGGTGGTTT...TACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CAA 90 bp GTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATTAAACCACCTGGTGGTTaGCAGGAGCTCTTGGTACAG +
Preference number: 5 (lower is better)
Translates to: VQEILHKVDFTWGIMHKIKPPGG*QELLVQ
Trigger: CTGTACCAAGAGCTCCTGCAAACCACCAGGTGGTTT...AATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CAA 90 bp ACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACGTGGTGCAGGAAGAGTaGTATAAACCACCTGGTGGT +
Preference number: 5 (lower is better)
Translates to: TSVQEILHKVDFTWGIMHVVQEE*YKPPGG
Trigger: ACCACCAGGTGGTTTATACAACTCTTCCTGCACCAC...GTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CAA 90 bp TGCCCTTCGACACTGGACTCCAAATTCTTCAGTTTGGGGATTCAGTCTGGCTTTGAACAGTGGTTACCTTaGATGGAAAGGAAAAGGGAT +
Preference number: 5 (lower is better)
Translates to: CPSTLDSKFFSLGIQSGFEQWLP*MERKRD
Trigger: ATCCCTTTTCCTTTCCATCAAAGGTAACCACTGTTC...AAAGCCAGACTGAATCCCCAAACTGAAGAATTTGGAGTCCAGTGTCGAAGGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR CAA 90 bp CTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGAAGGTTAGCAGCCATTTaGAGACAGCTGCACAGTCTC +
Preference number: 5 (lower is better)
Translates to: LSKKSCTRWILHGVSCTRRLAAI*RQLHSL
Trigger: GAGACTGTGCAGCTGTCTCAAAATGGCTGCTAACCT...TCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544627.5
CDS CCA 90 bp AGGGTTCCTTTGAATACTAGGACTGGGCACAGAAGGAACGTTGTTTaGTTTAGTGGGATTTGGCAAGGATGGCAAGGATACTGGATTTTT +
Preference number: 5 (lower is better)
Translates to: RVPLNTRTGHRRNVV*FSGIWQGWQGYWIF
Trigger: AAAAATCCAGTATCCTTGCCATCCTTGCCAAATCCCACTAAACCAAACAACGTTCCTTCTGTGCCCAGTCCTAGTATTCAAAGGAACCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000261168.9
ENST00000536444.5
ENST00000537653.5
ENST00000540793.5
ENST00000541654.1
ENST00000543189.5
ENST00000544627.5
CDS-3UTR CAA 90 bp TCTTCAGTTTGGGGATTCAGTCTGGCTTTCCTTGCTCAGCTTGCAGACAGCCTATTGCCATTTAACAGCTaGACATCAGTTTTCAACAGT +
Preference number: 5 (lower is better)
Translates to: SSVWGFSLAFLAQLADSLLPFNS*TSVFNS
Trigger: ACTGTTGAAAACTGATGTCAAGCTGTTAAATGGCAA...TAGGCTGTCTGCAAGCTGAGCAAGGAAAGCCAGACTGAATCCCCAAACTGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR CAA 90 bp TCTTCAGTTTGGGGATTCAGTCTGGCTTTCCTTGCTCAGCTTGCAGACAGCCTACGTTTAGACTGTACATaGTCCATGTCTTCTGATTTA +
Preference number: 5 (lower is better)
Translates to: SSVWGFSLAFLAQLADSLRLDCT*SMSSDL
Trigger: TAAATCAGAAGACATGGACAATGTACAGTCTAAACG...TAGGCTGTCTGCAAGCTGAGCAAGGAAAGCCAGACTGAATCCCCAAACTGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR CAA 90 bp TTCTTCAGTTTGGGGATTCAGTCTGGCTTTCCTTGCTCAGCTTGCAGACAGCCTGGCTGTAATCTTTACTaGAAATTCTGCCTCATATTC +
Preference number: 5 (lower is better)
Translates to: FFSLGIQSGFPCSACRQPGCNLY*KFCLIF
Trigger: GAATATGAGGCAGAATTTCAAGTAAAGATTACAGCC...AGGCTGTCTGCAAGCTGAGCAAGGAAAGCCAGACTGAATCCCCAAACTGAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR CAA 90 bp ACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACGCTGCTTCAAAGCGTTaGGTTAACCTGGCTATCTTG +
Preference number: 5 (lower is better)
Translates to: TSVQEILHKVDFTWGIMHAASKR*VNLAIL
Trigger: CAAGATAGCCAGGTTAACCAAACGCTTTGAAGCAGC...GTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CAA 90 bp GTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTAGGTGATACTGGTGGGTaGGGTGGATGTTCATGTCTT +
Preference number: 5 (lower is better)
Translates to: VYTHLSKKSCTRWILHGVGDTGG*GGCSCL
Trigger: AAGACATGAACATCCACCCAACCCACCAGTATCACC...TACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CAA 90 bp CACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCAACTACAGTAGCTGTATaGGGTGCAGGAAGAACTGAC +
Preference number: 5 (lower is better)
Translates to: HICPRNLAQGGFYMGYHATTVAV*GAGRTD
Trigger: GTCAGTTCTTCCTGCACCCAATACAGCTACTGTAGT...TGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CAA 90 bp AACAAATGTAGTGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTCCTGCACAGCAAGTGTaGTTCCCAATGGTGCAGCAC +
Preference number: 5 (lower is better)
Translates to: NKCSVYTHLSKKSCTRWIPAQQV*FPMVQH
Trigger: GTGCTGCACCATTGGGAACAACACTTGCTGTGCAGG...AATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACACTACATTTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CAA 90 bp ACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACATTCTTGGGGTGGTATaGCTGTTCTGTTCTGCAGCA +
Preference number: 5 (lower is better)
Translates to: TSVQEILHKVDFTWGIMHILGVV*LFCSAA
Trigger: TGCTGCAGAACAGAACAGCAATACCACCCCAAGAAT...GTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CAA 90 bp AACAAATGTAGTGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTAAGAGGCGGTGCTGGTaGTATGGGTTGCAATGGTCG +
Preference number: 5 (lower is better)
Translates to: NKCSVYTHLSKKSCTRWIKRRCW*YGLQWS
Trigger: CGACCATTGCAACCCATACAACCAGCACCGCCTCTT...AATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACACTACATTTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CAA 90 bp CAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATTAAAAAGAGGCGGTGCTGGTaGTATGGGTTGCAATGGTCG +
Preference number: 5 (lower is better)
Translates to: QEILHKVDFTWGIMHKIKKRRCW*YGLQWS
Trigger: CGACCATTGCAACCCATACAACCAGCACCGCCTCTT...TTTAATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CAA 90 bp TGGTGGGCACAATCTAATCAGCTGTCAATGAATACAAAGCAGGCAGAAAAACATGTGGTGCAGGAAGAGTaGTATAAACCACCTGGTGGT +
Preference number: 5 (lower is better)
Translates to: WWAQSNQLSMNTKQAEKHVVQEE*YKPPGG
Trigger: ACCACCAGGTGGTTTATACAACTCTTCCTGCACCAC...ATGTTTTTCTGCCTGCTTTGTATTCATTGACAGCTGATTAGATTGTGCCCACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR CAA 90 bp GTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATTACACTATTTTGGGGATaGACCTGCCGAACAGCAGGA +
Preference number: 5 (lower is better)
Translates to: VQEILHKVDFTWGIMHKITLFWG*TCRTAG
Trigger: TCCTGCTGTTCGGCAGGTCAATCCCCAAAATAGTGT...AATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CAA 90 bp AGTGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGACACTATTTTGGGGATaGACCTGCCGAACAGCAGGA +
Preference number: 5 (lower is better)
Translates to: SVYTHLSKKSCTRWILHGTLFWG*TCRTAG
Trigger: TCCTGCTGTTCGGCAGGTCAATCCCCAAAATAGTGT...CCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CAA 90 bp AATGAAAATGGGAGACTCCAATGCAATAACACCTACATAAGGAAAAACACACATGGGCTCAGTATGCACTaGTGGTGGTCGGTGATGCAC +
Preference number: 5 (lower is better)
Translates to: NENGRLQCNNTYIRKNTHGLSMH*WWSVMH
Trigger: GTGCATCACCGACCACCACAAGTGCATACTGAGCCC...ATGTGTGTTTTTCCTTATGTAGGTGTTATTGCATTGGAGTCTCCCATTTTCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536444.5
ENST00000544627.5
CDS-3UTR CAA 90 bp AAATGTAGTGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTAGGGCTCAGTATGCACTaGTGGTGGTCGGTGATGCAC +
Preference number: 5 (lower is better)
Translates to: KCSVYTHLSKKSCTRWILGLSMH*WWSVMH
Trigger: GTGCATCACCGACCACCACAAGTGCATACTGAGCCC...TAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACACTACATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CAA 90 bp TCAGTTTGGGGATTCAGTCTGGCTTTCCTTGCTCAGCTTGCAGACAGCCTATTGTCTTTAAGACTCTCATaGAAGGCTATCCTTTACCAT +
Preference number: 5 (lower is better)
Translates to: SVWGFSLAFLAQLADSLLSLRLS*KAILYH
Trigger: ATGGTAAAGGATAGCCTTCAATGAGAGTCTTAAAGA...CAATAGGCTGTCTGCAAGCTGAGCAAGGAAAGCCAGACTGAATCCCCAAACTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS GCA 90 bp CAGCTTGACATCAGTTTTCAACAGTTCTTCTTTGACCTTGTACACTaGTTCAAGTTGCTGACGATCACTCACTCTCATCGTTTTTCGAGC +
Preference number: 5 (lower is better)
Translates to: QLDISFQQFFFDLVH*FKLLTITHSHRFSS
Trigger: GCTCGAAAAACGATGAGAGTGAGTGATCGTCAGCAACTTGAAGCAGTGTACAAGGTCAAAGAAGAACTGTTGAAAACTGATGTCAAGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 20 transcripts:
ENST00000261168.9
ENST00000396279.2
ENST00000428217.6
ENST00000534828.1
ENST00000535132.1
ENST00000536279.1
ENST00000536444.5
ENST00000537653.5
ENST00000539057.1
ENST00000539659.5
ENST00000540793.5
ENST00000541056.1
ENST00000541654.1
ENST00000542514.5
ENST00000542967.1
ENST00000542991.1
ENST00000543189.5
ENST00000544627.5
ENST00000545723.1
ENST00000545769.1
CDS CCA 90 bp TTGACTGAGGATCACAGAAAGGCCCAAAACGTCCATAAATATCCTTaGCTCGTACTGCAAAGTAGTATTTGCTACCAGATACAAACTGGG +
Preference number: 5 (lower is better)
Translates to: LTEDHRKAQNVHKYP*LVLQSSICYQIQTG
Trigger: CCCAGTTTGTATCTGGTAGCAAATACTACTTTGCAGTACGAGCCAAGGATATTTATGGACGTTTTGGGCCTTTCTGTGATCCTCAGTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261168.9
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CAA 90 bp TGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATGTACACTGCTTCAAGTaGCTGACGATCACTCACTCT +
Preference number: 5 (lower is better)
Translates to: CPRNLAQGGFYMGYHAQDVHCFK*LTITHS
Trigger: AGAGTGAGTGATCGTCAGCAACTTGAAGCAGTGTAC...ATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CAA 90 bp TGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATGTTAACCTGGCTATCTaGGCCTGTAGTTCAGTGAGA +
Preference number: 5 (lower is better)
Translates to: CPRNLAQGGFYMGYHAQDVNLAI*ACSSVR
Trigger: TCTCACTGAACTACAGGCCAAGATAGCCAGGTTAAC...ATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CAA 90 bp CTTCAAAACCCTAATAAAAATAGGGCCACTTGCTGGAGCCCAGTTTGTATTAGAGCTGCTTCAAAGCGTTaGGTTAACCTGGCTATCTTG +
Preference number: 5 (lower is better)
Translates to: LQNPNKNRATCWSPVCIRAASKR*VNLAIL
Trigger: CAAGATAGCCAGGTTAACCAAACGCTTTGAAGCAGC...TCTAATACAAACTGGGCTCCAGCAAGTGGCCCTATTTTTATTAGGGTTTTGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536444.5
CDS-3UTR CAA 90 bp GTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATTGCTGCTTCAAAGCGTTaGGTTAACCTGGCTATCTTG +
Preference number: 5 (lower is better)
Translates to: VQEILHKVDFTWGIMHKIAASKR*VNLAIL
Trigger: CAAGATAGCCAGGTTAACCAAACGCTTTGAAGCAGC...AATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CAA 90 bp AATGAAAATGGGAGACTCCAATGCAATAACACCTACATAAGGAAAAACACACATCCTGCACAGCAAGTGTaGTTCCCAATGGTGCAGCAC +
Preference number: 5 (lower is better)
Translates to: NENGRLQCNNTYIRKNTHPAQQV*FPMVQH
Trigger: GTGCTGCACCATTGGGAACAACACTTGCTGTGCAGG...ATGTGTGTTTTTCCTTATGTAGGTGTTATTGCATTGGAGTCTCCCATTTTCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536444.5
ENST00000544627.5
CDS-3UTR CAA 90 bp CACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCAAGAAGTCCTTGTGGCTaGTACAATAGAGTGTGCTGT +
Preference number: 5 (lower is better)
Translates to: HICPRNLAQGGFYMGYHARSPCG*YNRVCC
Trigger: ACAGCACACTCTATTGTACAAGCCACAAGGACTTCT...TGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CAA 90 bp GTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTAATTCTTGGGGTGGTATaGCTGTTCTGTTCTGCAGCA +
Preference number: 5 (lower is better)
Translates to: VYTHLSKKSCTRWILHGVILGVV*LFCSAA
Trigger: TGCTGCAGAACAGAACAGCAATACCACCCCAAGAAT...TACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CAA 90 bp TGGTGGGCACAATCTAATCAGCTGTCAATGAATACAAAGCAGGCAGAAAAACATATTCTTGGGGTGGTATaGCTGTTCTGTTCTGCAGCA +
Preference number: 5 (lower is better)
Translates to: WWAQSNQLSMNTKQAEKHILGVV*LFCSAA
Trigger: TGCTGCAGAACAGAACAGCAATACCACCCCAAGAAT...ATGTTTTTCTGCCTGCTTTGTATTCATTGACAGCTGATTAGATTGTGCCCACCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR CAA 90 bp AACAAATGTAGTGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTCTGAGATGGTCCACTaGTTGGCACCCCAGATGGTT +
Preference number: 5 (lower is better)
Translates to: NKCSVYTHLSKKSCTRWISEMVH*LAPQMV
Trigger: AACCATCTGGGGTGCCAACAAGTGGACCATCTCAGA...AATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACACTACATTTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CAA 90 bp AAATGTAGTGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTAGGTTTGCAGGAGCTCTaGGTACAGGGAGTCTTGTGG +
Preference number: 5 (lower is better)
Translates to: KCSVYTHLSKKSCTRWILGLQEL*VQGVLW
Trigger: CCACAAGACTCCCTGTACCAAGAGCTCCTGCAAACC...TAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACACTACATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CAA 90 bp CATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAACTGTAACACTATTTaGGGGATTGACCTGCCGAAC +
Preference number: 5 (lower is better)
Translates to: HLSKKSCTRWILHGVSCTNCNTI*GIDLPN
Trigger: GTTCGGCAGGTCAATCCCCAAAATAGTGTTACAGTT...TGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CAA 90 bp GGAACACCTCTCTGTGAGGCAAATGGTATCTCAACAAATACCGACTTTTCAAGGAAGAGATCACATCTGTaGACTGAGGATCACAGAAAG +
Preference number: 5 (lower is better)
Translates to: GTPLCEANGISTNTDFSRKRSHL*TEDHRK
Trigger: CTTTCTGTGATCCTCAGTCAACAGATGTGATCTCTT...CCTTGAAAAGTCGGTATTTGTTGAGATACCATTTGCCTCACAGAGAGGTGTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536444.5
CDS-3UTR CAA 90 bp CTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATTGGAAGGAAGGTCTTaGCAGTACCTTACTGTGCTA +
Preference number: 5 (lower is better)
Translates to: LSKKSCTRWILHGVSCTRLEGRS*QYLTVL
Trigger: TAGCACAGTAAGGTACTGCAAAGACCTTCCTTCCAA...TCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536444.5
CDS-3UTR CAA 90 bp AGTGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGTCCTCACTGACATACTaGCTGCCTAAGCAGCTACAA +
Preference number: 5 (lower is better)
Translates to: SVYTHLSKKSCTRWILHGSSLTY*LPKQLQ
Trigger: TTGTAGCTGCTTAGGCAGCAAGTATGTCAGTGAGGA...CCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544627.5
CDS TCA 90 bp AGTGTAATTAAGATGGCTGCAATGTGCACTCAAGAACTCACACAGTaGAAACTCAGCTATGTAACAAACAAAGCCCCTCCCACTTTGTCA +
Preference number: 5 (lower is better)
Translates to: SVIKMAAMCTQELTQ*KLSYVTNKAPPTLS
Trigger: TGACAAAGTGGGAGGGGCTTTGTTTGTTACATAGCTGAGTTTTCACTGTGTGAGTTCTTGAGTGCACATTGCAGCCATCTTAATTACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544627.5
CDS-3UTR CAA 90 bp CTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGAAGTTCTTCTTTGACCTaGTACACTGCTTCAAGTTGC +
Preference number: 5 (lower is better)
Translates to: LSKKSCTRWILHGVSCTRSSSLT*YTASSC
Trigger: GCAACTTGAAGCAGTGTACAAGGTCAAAGAAGAACT...TCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CAA 90 bp CACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCAAGGTACGATCAAAGGTaGATTCAGAAGTCAGCTCAT +
Preference number: 5 (lower is better)
Translates to: HICPRNLAQGGFYMGYHARYDQR*IQKSAH
Trigger: ATGAGCTGACTTCTGAATCAACCTTTGATCGTACCT...TGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CAA 90 bp TACACTGCAGAATGGCTAAATCTAGCTGACATATGCATGATCTCACATACTTACGTTAACCTGGCTATCTaGGCCTGTAGTTCAGTGAGA +
Preference number: 5 (lower is better)
Translates to: YTAEWLNLADICMISHTYVNLAI*ACSSVR
Trigger: TCTCACTGAACTACAGGCCAAGATAGCCAGGTTAAC...GTAAGTATGTGAGATCATGCATATGTCAGCTAGATTTAGCCATTCTGCAGTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR CAA 90 bp TACACTGCAGAATGGCTAAATCTAGCTGACATATGCATGATCTCACATACTTACGCTGCTTCAAAGCGTTaGGTTAACCTGGCTATCTTG +
Preference number: 5 (lower is better)
Translates to: YTAEWLNLADICMISHTYAASKR*VNLAIL
Trigger: CAAGATAGCCAGGTTAACCAAACGCTTTGAAGCAGC...GTAAGTATGTGAGATCATGCATATGTCAGCTAGATTTAGCCATTCTGCAGTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR CAA 90 bp TGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATTGTATTCACAGGAGTTaGAAAGGATGGTGGTGCACT +
Preference number: 5 (lower is better)
Translates to: CPRNLAQGGFYMGYHAQDCIHRS*KGWWCT
Trigger: AGTGCACCACCATCCTTTCAAACTCCTGTGAATACA...ATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CAA 90 bp GTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATGTATTCACAGGAGTTaGAAAGGATGGTGGTGCACT +
Preference number: 5 (lower is better)
Translates to: VYTHLSKKSCTRWILHGVCIHRS*KGWWCT
Trigger: AGTGCACCACCATCCTTTCAAACTCCTGTGAATACA...TACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CAA 90 bp ACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACGGAGGAGTGACAAGATaGGTTGAAGATACTGTATTC +
Preference number: 5 (lower is better)
Translates to: TSVQEILHKVDFTWGIMHGGVTR*VEDTVF
Trigger: GAATACAGTATCTTCAACCAATCTTGTCACTCCTCC...GTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CAA 90 bp AACACCCACACATATTCCCCAGCCTCAAAACTAAAGCAAGGTACACATTTACATAGTCTGCAATTTAGGTaGACTACTGACAACTGCTGG +
Preference number: 5 (lower is better)
Translates to: NTHTYSPASKLKQGTHLHSLQFR*TTDNCW
Trigger: CCAGCAGTTGTCAGTAGTCAACCTAAATTGCAGACT...ATGTAAATGTGTACCTTGCTTTAGTTTTGAGGCTGGGGAATATGTGTGGGTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536444.5
ENST00000544627.5
CDS-3UTR CAA 90 bp TGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATAGTCTGCAATTTAGGTaGACTACTGACAACTGCTGG +
Preference number: 5 (lower is better)
Translates to: CPRNLAQGGFYMGYHAQDSLQFR*TTDNCW
Trigger: CCAGCAGTTGTCAGTAGTCAACCTAAATTGCAGACT...ATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CAA 90 bp TGGTGGGCACAATCTAATCAGCTGTCAATGAATACAAAGCAGGCAGAAAAACATAACATTGCCAGATGGTaGATTAGTCACCAAAGTCCC +
Preference number: 5 (lower is better)
Translates to: WWAQSNQLSMNTKQAEKHNIARW*ISHQSP
Trigger: GGGACTTTGGTGACTAATCAACCATCTGGCAATGTT...ATGTTTTTCTGCCTGCTTTGTATTCATTGACAGCTGATTAGATTGTGCCCACCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR CAA 90 bp GTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTAAACATTGCCAGATGGTaGATTAGTCACCAAAGTCCC +
Preference number: 5 (lower is better)
Translates to: VYTHLSKKSCTRWILHGVNIARW*ISHQSP
Trigger: GGGACTTTGGTGACTAATCAACCATCTGGCAATGTT...TACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CAA 90 bp TGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATCACTGTAGGTGGGCTTaGCACAGAAATGAATTCAAC +
Preference number: 5 (lower is better)
Translates to: CPRNLAQGGFYMGYHAQDHCRWA*HRNEFN
Trigger: GTTGAATTCATTTCTGTGCAAAGCCCACCTACAGTG...ATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CAA 90 bp GTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATTGGCACAGAAGGAACGTaGTTTGGTTTAGTGGGATTT +
Preference number: 5 (lower is better)
Translates to: VQEILHKVDFTWGIMHKIGTEGT*FGLVGF
Trigger: AAATCCCACTAAACCAAACAACGTTCCTTCTGTGCC...AATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CAA 90 bp AAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATTAAAAGGCAGTAGGGTTCCTTaGAATACTAGGACTGGGCAC +
Preference number: 5 (lower is better)
Translates to: KKSCTRWILHGVSCTRLKGSRVP*NTRTGH
Trigger: GTGCCCAGTCCTAGTATTCAAAGGAACCCTACTGCC...TTTTAATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CAA 90 bp AATGAAAATGGGAGACTCCAATGCAATAACACCTACATAAGGAAAAACACACATGGCAGTAGGGTTCCTTaGAATACTAGGACTGGGCAC +
Preference number: 5 (lower is better)
Translates to: NENGRLQCNNTYIRKNTHGSRVP*NTRTGH
Trigger: GTGCCCAGTCCTAGTATTCAAAGGAACCCTACTGCC...ATGTGTGTTTTTCCTTATGTAGGTGTTATTGCATTGGAGTCTCCCATTTTCATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536444.5
ENST00000544627.5
CDS-3UTR CAA 90 bp TATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATATTCTTGGGGTGGTATaGCTGTTCTGTTCTGCAGCA +
Preference number: 5 (lower is better)
Translates to: YTHICPRNLAQGGFYMGYILGVV*LFCSAA
Trigger: TGCTGCAGAACAGAACAGCAATACCACCCCAAGAAT...ATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CAA 90 bp CATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAACATATGTGGTTGTTaGAGGCACTCGAACTGTAAC +
Preference number: 5 (lower is better)
Translates to: HLSKKSCTRWILHGVSCTNICGC*RHSNCN
Trigger: GTTACAGTTCGAGTGCCTCAAACAACCACATATGTT...TGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CAA 90 bp CTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGAAAGAGATCACATCTGTaGACTGAGGATCACAGAAAG +
Preference number: 5 (lower is better)
Translates to: LSKKSCTRWILHGVSCTRKRSHL*TEDHRK
Trigger: CTTTCTGTGATCCTCAGTCAACAGATGTGATCTCTT...TCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CAA 90 bp CTTCAAAACCCTAATAAAAATAGGGCCACTTGCTGGAGCCCAGTTTGTATTAGAAGTCAAGGAGAACATTaGGAAGGAAGGTCTTTGCAG +
Preference number: 5 (lower is better)
Translates to: LQNPNKNRATCWSPVCIRSQGEH*EGRSLQ
Trigger: CTGCAAAGACCTTCCTTCCAAATGTTCTCCTTGACT...TCTAATACAAACTGGGCTCCAGCAAGTGGCCCTATTTTTATTAGGGTTTTGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536444.5
CDS-3UTR CAA 90 bp AACAAATGTAGTGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTGTACACTGCTTCAAGTaGCTGACGATCACTCACTCT +
Preference number: 5 (lower is better)
Translates to: NKCSVYTHLSKKSCTRWIVHCFK*LTITHS
Trigger: AGAGTGAGTGATCGTCAGCAACTTGAAGCAGTGTAC...AATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACACTACATTTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CAA 90 bp ACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACTTCAACAGTTCTTCTTaGACCTTGTACACTGCTTCA +
Preference number: 5 (lower is better)
Translates to: TSVQEILHKVDFTWGIMHFNSSS*TLYTAS
Trigger: TGAAGCAGTGTACAAGGTCAAAGAAGAACTGTTGAA...GTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CAA 90 bp CTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATTCAACAGTTCTTCTTaGACCTTGTACACTGCTTCA +
Preference number: 5 (lower is better)
Translates to: LSKKSCTRWILHGVSCTRFNSSS*TLYTAS
Trigger: TGAAGCAGTGTACAAGGTCAAAGAAGAACTGTTGAA...TCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CAA 90 bp AGTGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGTTTCCAAAGGTGAGGTaGGGTCCAAATCTCCATTTT +
Preference number: 5 (lower is better)
Translates to: SVYTHLSKKSCTRWILHGFPKVR*GPNLHF
Trigger: AAAATGGAGATTTGGACCCAACCTCACCTTTGGAAA...CCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CAA 90 bp TGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTAGGTACGATCAAAGGTaGATTCAGAAGTCAGCTCAT +
Preference number: 5 (lower is better)
Translates to: CIHTSVQEILHKVDFTWGRYDQR*IQKSAH
Trigger: ATGAGCTGACTTCTGAATCAACCTTTGATCGTACCT...ACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CAA 90 bp CATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGAGCACGTTTCATTTaGCGATATAACTTCAGACTC +
Preference number: 5 (lower is better)
Translates to: HLSKKSCTRWILHGVSCTRARFI*RYNFRL
Trigger: GAGTCTGAAGTTATATCGCAAAATGAAACGTGCTCT...TGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CAA 90 bp CTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGAAGAGCACGTTTCATTTaGCGATATAACTTCAGACTC +
Preference number: 5 (lower is better)
Translates to: LSKKSCTRWILHGVSCTRRARFI*RYNFRL
Trigger: GAGTCTGAAGTTATATCGCAAAATGAAACGTGCTCT...TCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CAA 90 bp AATGAAAATGGGAGACTCCAATGCAATAACACCTACATAAGGAAAAACACACATGGTGATACTGGTGGGTaGGGTGGATGTTCATGTCTT +
Preference number: 5 (lower is better)
Translates to: NENGRLQCNNTYIRKNTHGDTGG*GGCSCL
Trigger: AAGACATGAACATCCACCCAACCCACCAGTATCACC...ATGTGTGTTTTTCCTTATGTAGGTGTTATTGCATTGGAGTCTCCCATTTTCATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536444.5
ENST00000544627.5
CDS-3UTR CAA 90 bp TGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATGGAGGAGTGACAAGATaGGTTGAAGATACTGTATTC +
Preference number: 5 (lower is better)
Translates to: CPRNLAQGGFYMGYHAQDGGVTR*VEDTVF
Trigger: GAATACAGTATCTTCAACCAATCTTGTCACTCCTCC...ATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CAA 90 bp GTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTAGGAGGAGTGACAAGATaGGTTGAAGATACTGTATTC +
Preference number: 5 (lower is better)
Translates to: VYTHLSKKSCTRWILHGVGGVTR*VEDTVF
Trigger: GAATACAGTATCTTCAACCAATCTTGTCACTCCTCC...TACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CAA 90 bp GTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATTTCTGGTTTTCAATTCTaGGGGTGGTATTGCTGTTCT +
Preference number: 5 (lower is better)
Translates to: VQEILHKVDFTWGIMHKISGFQF*GWYCCS
Trigger: AGAACAGCAATACCACCCCAAGAATTGAAAACCAGA...AATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CAA 90 bp AGTGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGTCTGGTTTTCAATTCTaGGGGTGGTATTGCTGTTCT +
Preference number: 5 (lower is better)
Translates to: SVYTHLSKKSCTRWILHGSGFQF*GWYCCS
Trigger: AGAACAGCAATACCACCCCAAGAATTGAAAACCAGA...CCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CAA 90 bp TGGTGGGCACAATCTAATCAGCTGTCAATGAATACAAAGCAGGCAGAAAAACATTCTGGTTTTCAATTCTaGGGGTGGTATTGCTGTTCT +
Preference number: 5 (lower is better)
Translates to: WWAQSNQLSMNTKQAEKHSGFQF*GWYCCS
Trigger: AGAACAGCAATACCACCCCAAGAATTGAAAACCAGA...ATGTTTTTCTGCCTGCTTTGTATTCATTGACAGCTGATTAGATTGTGCCCACCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR CAA 90 bp TGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTTCTGGTTTTCAATTCTaGGGGTGGTATTGCTGTTCT +
Preference number: 5 (lower is better)
Translates to: CIHTSVQEILHKVDFTWGSGFQF*GWYCCS
Trigger: AGAACAGCAATACCACCCCAAGAATTGAAAACCAGA...ACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CAA 90 bp GTGATAAAACAACAAAATCTTAGGATGTTGAGGATACTGAATTGGCCCAAGAAATTGGTACAGGGAGTCTaGTGGTCACCTGAGTTACTG +
Preference number: 5 (lower is better)
Translates to: VIKQQNLRMLRILNWPKKLVQGV*WSPELL
Trigger: CAGTAACTCAGGTGACCACAAGACTCCCTGTACCAA...TTTCTTGGGCCAATTCAGTATCCTCAACATCCTAAGATTTTGTTGTTTTATCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536444.5
CDS-3UTR CAA 90 bp AATGAAAATGGGAGACTCCAATGCAATAACACCTACATAAGGAAAAACACACATTTGGTACAGGGAGTCTaGTGGTCACCTGAGTTACTG +
Preference number: 5 (lower is better)
Translates to: NENGRLQCNNTYIRKNTHLVQGV*WSPELL
Trigger: CAGTAACTCAGGTGACCACAAGACTCCCTGTACCAA...ATGTGTGTTTTTCCTTATGTAGGTGTTATTGCATTGGAGTCTCCCATTTTCATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536444.5
ENST00000544627.5
CDS-3UTR CAA 90 bp AATGAAAATGGGAGACTCCAATGCAATAACACCTACATAAGGAAAAACACACATGTGGTGCAGGAAGAGTaGTATAAACCACCTGGTGGT +
Preference number: 5 (lower is better)
Translates to: NENGRLQCNNTYIRKNTHVVQEE*YKPPGG
Trigger: ACCACCAGGTGGTTTATACAACTCTTCCTGCACCAC...ATGTGTGTTTTTCCTTATGTAGGTGTTATTGCATTGGAGTCTCCCATTTTCATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536444.5
ENST00000544627.5
CDS-3UTR CAA 90 bp AAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATTAAAAGTGGTGCAGGAAGAGTaGTATAAACCACCTGGTGGT +
Preference number: 5 (lower is better)
Translates to: KKSCTRWILHGVSCTRLKVVQEE*YKPPGG
Trigger: ACCACCAGGTGGTTTATACAACTCTTCCTGCACCAC...TTTTAATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CAA 90 bp TATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATAACTGTAACACTATTTaGGGGATTGACCTGCCGAAC +
Preference number: 5 (lower is better)
Translates to: YTHICPRNLAQGGFYMGYNCNTI*GIDLPN
Trigger: GTTCGGCAGGTCAATCCCCAAAATAGTGTTACAGTT...ATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CAA 90 bp AGTGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGAACATATGTGGTTGTTaGAGGCACTCGAACTGTAAC +
Preference number: 5 (lower is better)
Translates to: SVYTHLSKKSCTRWILHGNICGC*RHSNCN
Trigger: GTTACAGTTCGAGTGCCTCAAACAACCACATATGTT...CCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CAA 90 bp GTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATTCCCAGGGTTAGTCCATaGTTTACAACATATGTGGTT +
Preference number: 5 (lower is better)
Translates to: VQEILHKVDFTWGIMHKIPRVSP*FTTYVV
Trigger: AACCACATATGTTGTAAACAATGGACTAACCCTGGG...AATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CAA 90 bp GTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTACCCAGGGTTAGTCCATaGTTTACAACATATGTGGTT +
Preference number: 5 (lower is better)
Translates to: VYTHLSKKSCTRWILHGVPRVSP*FTTYVV
Trigger: AACCACATATGTTGTAAACAATGGACTAACCCTGGG...TACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CAA 90 bp CTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATCTGTCCAAGAAATCTaGCACAAGGTGGATTTTACA +
Preference number: 5 (lower is better)
Translates to: LSKKSCTRWILHGVSCTRSVQEI*HKVDFT
Trigger: TGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGA...TCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CAA 90 bp GTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTAGAACACATATCAACATaGCAACCACTGCAGGTCAAA +
Preference number: 5 (lower is better)
Translates to: VYTHLSKKSCTRWILHGVEHIST*QPLQVK
Trigger: TTTGACCTGCAGTGGTTGCAATGTTGATATGTGTTC...TACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536444.5
CDS-3UTR CAA 90 bp TGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATTACAAACATCCTACATaGCAGGTTGCAGTATCAGGT +
Preference number: 5 (lower is better)
Translates to: CPRNLAQGGFYMGYHAQDYKHPT*QVAVSG
Trigger: ACCTGATACTGCAACCTGCAATGTAGGATGTTTGTA...ATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536444.5
CDS-3UTR CAA 90 bp GTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATTCAAAATCTTAGGATGTaGAGGATACTGAATTGGCCC +
Preference number: 5 (lower is better)
Translates to: VQEILHKVDFTWGIMHKIQNLRM*RILNWP
Trigger: GGGCCAATTCAGTATCCTCAACATCCTAAGATTTTG...AATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000536444.5
CDS-3UTR CAA 90 bp TGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTGCTGCACAGTCTCAGTaGCACAAAAGTGTAATTAAG +
Preference number: 5 (lower is better)
Translates to: CIHTSVQEILHKVDFTWGAAQSQ*HKSVIK
Trigger: CTTAATTACACTTTTGTGCAACTGAGACTGTGCAGC...ACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000544627.5
CDS-3UTR CAA 90 bp GAAACTAAAAAGGTAACCGTGGAGTGGAAACTGCTACTAGAAAGTCTGTTATCAAGTTCTTCTTTGACCTaGTACACTGCTTCAAGTTGC +
Preference number: 5 (lower is better)
Translates to: ETKKVTVEWKLLLESLLSSSSLT*YTASSC
Trigger: GCAACTTGAAGCAGTGTACAAGGTCAAAGAAGAACT...TGATAACAGACTTTCTAGTAGCAGTTTCCACTCCACGGTTACCTTTTTAGTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536444.5
CDS-3UTR CAA 90 bp TATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATAGTTCTTCTTTGACCTaGTACACTGCTTCAAGTTGC +
Preference number: 5 (lower is better)
Translates to: YTHICPRNLAQGGFYMGYSSSLT*YTASSC
Trigger: GCAACTTGAAGCAGTGTACAAGGTCAAAGAAGAACT...ATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CAA 90 bp TGGTGGGCACAATCTAATCAGCTGTCAATGAATACAAAGCAGGCAGAAAAACATTTCAACAGTTCTTCTTaGACCTTGTACACTGCTTCA +
Preference number: 5 (lower is better)
Translates to: WWAQSNQLSMNTKQAEKHFNSSS*TLYTAS
Trigger: TGAAGCAGTGTACAAGGTCAAAGAAGAACTGTTGAA...ATGTTTTTCTGCCTGCTTTGTATTCATTGACAGCTGATTAGATTGTGCCCACCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR CAA 90 bp CTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATTGCCATTTAACAGCTaGACATCAGTTTTCAACAGT +
Preference number: 5 (lower is better)
Translates to: LSKKSCTRWILHGVSCTRLPFNS*TSVFNS
Trigger: ACTGTTGAAAACTGATGTCAAGCTGTTAAATGGCAA...TCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CAA 90 bp ACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACTTGCCATTTAACAGCTaGACATCAGTTTTCAACAGT +
Preference number: 5 (lower is better)
Translates to: TSVQEILHKVDFTWGIMHLPFNS*TSVFNS
Trigger: ACTGTTGAAAACTGATGTCAAGCTGTTAAATGGCAA...GTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CAA 90 bp GTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATTTCTCCATTTTCATGGTaGCCATTTAACAGCTTGACA +
Preference number: 5 (lower is better)
Translates to: VQEILHKVDFTWGIMHKISPFSW*PFNSLT
Trigger: TGTCAAGCTGTTAAATGGCAACCATGAAAATGGAGA...AATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CAA 90 bp TATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATTTTCCAAAGGTGAGGTaGGGTCCAAATCTCCATTTT +
Preference number: 5 (lower is better)
Translates to: YTHICPRNLAQGGFYMGYFPKVR*GPNLHF
Trigger: AAAATGGAGATTTGGACCCAACCTCACCTTTGGAAA...ATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CAA 90 bp TACACTGCAGAATGGCTAAATCTAGCTGACATATGCATGATCTCACATACTTACTTTCCAAAGGTGAGGTaGGGTCCAAATCTCCATTTT +
Preference number: 5 (lower is better)
Translates to: YTAEWLNLADICMISHTYFPKVR*GPNLHF
Trigger: AAAATGGAGATTTGGACCCAACCTCACCTTTGGAAA...GTAAGTATGTGAGATCATGCATATGTCAGCTAGATTTAGCCATTCTGCAGTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR CAA 90 bp TATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATAGGTACGATCAAAGGTaGATTCAGAAGTCAGCTCAT +
Preference number: 5 (lower is better)
Translates to: YTHICPRNLAQGGFYMGYRYDQR*IQKSAH
Trigger: ATGAGCTGACTTCTGAATCAACCTTTGATCGTACCT...ATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CAA 90 bp AGTGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGAAACTGGTACAGACTTaGGTTCAAAGGTACGATCAA +
Preference number: 5 (lower is better)
Translates to: SVYTHLSKKSCTRWILHGKLVQT*VQRYDQ
Trigger: TTGATCGTACCTTTGAACCAAAGTCTGTACCAGTTT...CCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CAA 90 bp GTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATTAAACTGGTACAGACTTaGGTTCAAAGGTACGATCAA +
Preference number: 5 (lower is better)
Translates to: VQEILHKVDFTWGIMHKIKLVQT*VQRYDQ
Trigger: TTGATCGTACCTTTGAACCAAAGTCTGTACCAGTTT...AATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CAA 90 bp ACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACTCTTCTTCCTCAGGTTaGTTGTCCTTTTCATTACTT +
Preference number: 5 (lower is better)
Translates to: TSVQEILHKVDFTWGIMHSSSSG*LSFSLL
Trigger: AAGTAATGAAAAGGACAACAAACCTGAGGAAGAAGA...GTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CAA 90 bp ACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACGGCTGTAATCTTTACTaGAAATTCTGCCTCATATTC +
Preference number: 5 (lower is better)
Translates to: TSVQEILHKVDFTWGIMHGCNLY*KFCLIF
Trigger: GAATATGAGGCAGAATTTCAAGTAAAGATTACAGCC...GTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CAA 90 bp AATGAAAATGGGAGACTCCAATGCAATAACACCTACATAAGGAAAAACACACATGTTAACCTGGCTATCTaGGCCTGTAGTTCAGTGAGA +
Preference number: 5 (lower is better)
Translates to: NENGRLQCNNTYIRKNTHVNLAI*ACSSVR
Trigger: TCTCACTGAACTACAGGCCAAGATAGCCAGGTTAAC...ATGTGTGTTTTTCCTTATGTAGGTGTTATTGCATTGGAGTCTCCCATTTTCATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536444.5
ENST00000544627.5
CDS-3UTR CAA 90 bp CTTCAAAACCCTAATAAAAATAGGGCCACTTGCTGGAGCCCAGTTTGTATTAGATTCTTAAGATCTTCTTaGGCTGCTTCAAAGCGTTTG +
Preference number: 5 (lower is better)
Translates to: LQNPNKNRATCWSPVCIRFLRSS*AASKRL
Trigger: CAAACGCTTTGAAGCAGCCAAAGAAGATCTTAAGAA...TCTAATACAAACTGGGCTCCAGCAAGTGGCCCTATTTTTATTAGGGTTTTGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536444.5
CDS-3UTR CAA 90 bp TGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTTTCTTAAGATCTTCTTaGGCTGCTTCAAAGCGTTTG +
Preference number: 5 (lower is better)
Translates to: CIHTSVQEILHKVDFTWGFLRSS*AASKRL
Trigger: CAAACGCTTTGAAGCAGCCAAAGAAGATCTTAAGAA...ACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CAA 90 bp CAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATTAAAAGTCTGCAATTTAGGTaGACTACTGACAACTGCTGG +
Preference number: 5 (lower is better)
Translates to: QEILHKVDFTWGIMHKIKSLQFR*TTDNCW
Trigger: CCAGCAGTTGTCAGTAGTCAACCTAAATTGCAGACT...TTTAATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CAA 90 bp AAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATTAAAAACTACAGTAGCTGTATaGGGTGCAGGAAGAACTGAC +
Preference number: 5 (lower is better)
Translates to: KKSCTRWILHGVSCTRLKTTVAV*GAGRTD
Trigger: GTCAGTTCTTCCTGCACCCAATACAGCTACTGTAGT...TTTTAATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CAA 90 bp AAATGTAGTGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTAACTACAGTAGCTGTATaGGGTGCAGGAAGAACTGAC +
Preference number: 5 (lower is better)
Translates to: KCSVYTHLSKKSCTRWILTTVAV*GAGRTD
Trigger: GTCAGTTCTTCCTGCACCCAATACAGCTACTGTAGT...TAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACACTACATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CAA 90 bp CAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATTAAAAACATTGCCAGATGGTaGATTAGTCACCAAAGTCCC +
Preference number: 5 (lower is better)
Translates to: QEILHKVDFTWGIMHKIKNIARW*ISHQSP
Trigger: GGGACTTTGGTGACTAATCAACCATCTGGCAATGTT...TTTAATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CAA 90 bp AACAAATGTAGTGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTAACATTGCCAGATGGTaGATTAGTCACCAAAGTCCC +
Preference number: 5 (lower is better)
Translates to: NKCSVYTHLSKKSCTRWINIARW*ISHQSP
Trigger: GGGACTTTGGTGACTAATCAACCATCTGGCAATGTT...AATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACACTACATTTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CAA 90 bp ACATATCAACATTGCAACCACTGCAGGTCAAAACATATACATGCAGATATAGACCACTGTAGGTGGGCTTaGCACAGAAATGAATTCAAC +
Preference number: 5 (lower is better)
Translates to: TYQHCNHCRSKHIHADIDHCRWA*HRNEFN
Trigger: GTTGAATTCATTTCTGTGCAAAGCCCACCTACAGTG...GTCTATATCTGCATGTATATGTTTTGACCTGCAGTGGTTGCAATGTTGATATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536444.5
CDS-3UTR CAA 90 bp CAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATTAAACACTGTAGGTGGGCTTaGCACAGAAATGAATTCAAC +
Preference number: 5 (lower is better)
Translates to: QEILHKVDFTWGIMHKIKHCRWA*HRNEFN
Trigger: GTTGAATTCATTTCTGTGCAAAGCCCACCTACAGTG...TTTAATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CAA 90 bp GTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTAAAGGATACTGGATTTTaGGTAAGACCACTCACTGTA +
Preference number: 5 (lower is better)
Translates to: VYTHLSKKSCTRWILHGVKDTGF*VRPLTV
Trigger: TACAGTGAGTGGTCTTACCAAAAATCCAGTATCCTT...TACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CAA 90 bp AACAAATGTAGTGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTGGCACAGAAGGAACGTaGTTTGGTTTAGTGGGATTT +
Preference number: 5 (lower is better)
Translates to: NKCSVYTHLSKKSCTRWIGTEGT*FGLVGF
Trigger: AAATCCCACTAAACCAAACAACGTTCCTTCTGTGCC...AATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACACTACATTTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CAA 90 bp AACAAATGTAGTGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTAGAAGTCCTTGTGGCTaGTACAATAGAGTGTGCTGT +
Preference number: 5 (lower is better)
Translates to: NKCSVYTHLSKKSCTRWIRSPCG*YNRVCC
Trigger: ACAGCACACTCTATTGTACAAGCCACAAGGACTTCT...AATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACACTACATTTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CAA 90 bp AGTGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGAGAAGAACTCATGGTaGATACAGGAGTGTGATTTA +
Preference number: 5 (lower is better)
Translates to: SVYTHLSKKSCTRWILHGEKNSW*IQECDL
Trigger: TAAATCACACTCCTGTATCAACCATGAGTTCTTCTC...CCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CAA 90 bp TGGTGGGCACAATCTAATCAGCTGTCAATGAATACAAAGCAGGCAGAAAAACATGAGAAGAACTCATGGTaGATACAGGAGTGTGATTTA +
Preference number: 5 (lower is better)
Translates to: WWAQSNQLSMNTKQAEKHEKNSW*IQECDL
Trigger: TAAATCACACTCCTGTATCAACCATGAGTTCTTCTC...ATGTTTTTCTGCCTGCTTTGTATTCATTGACAGCTGATTAGATTGTGCCCACCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR CAA 90 bp TGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATTCTGTCCAAGAAATCTaGCACAAGGTGGATTTTACA +
Preference number: 5 (lower is better)
Translates to: CPRNLAQGGFYMGYHAQDSVQEI*HKVDFT
Trigger: TGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGA...ATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CAA 90 bp CTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATCTTTGGGTTTTGTTTaGATTCTGTTTGACCCACTT +
Preference number: 5 (lower is better)
Translates to: LSKKSCTRWILHGVSCTRSLGFV*ILFDPL
Trigger: AAGTGGGTCAAACAGAATCAAAACAAAACCCAAAGA...TCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000536444.5
ENST00000544627.5
CDS-3UTR CAA 90 bp AGTGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGGAGTTGTGCTATATTaGGTAGAGATGAAGGAGAAA +
Preference number: 5 (lower is better)
Translates to: SVYTHLSKKSCTRWILHGGVVLY*VEMKEK
Trigger: TTTCTCCTTCATCTCTACCAAATATAGCACAACTCC...CCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536444.5
CDS-3UTR CAA 90 bp CTTCAAAACCCTAATAAAAATAGGGCCACTTGCTGGAGCCCAGTTTGTATTAGATGGTTTAAAAATCACTaGAGTAGGCTGGATACAGTG +
Preference number: 5 (lower is better)
Translates to: LQNPNKNRATCWSPVCIRWFKNH*SRLDTV
Trigger: CACTGTATCCAGCCTACTCAAGTGATTTTTAAACCA...TCTAATACAAACTGGGCTCCAGCAAGTGGCCCTATTTTTATTAGGGTTTTGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000536444.5
CDS-3UTR CAA 90 bp GTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATACATCAGACTCAACTaGGCACCATCAAAACAAAGT +
Preference number: 5 (lower is better)
Translates to: VYTHLSKKSCTRWILHGVYIRLN*APSKQS
Trigger: ACTTTGTTTTGATGGTGCCAAGTTGAGTCTGATGTA...TACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000536444.5
CDS-3UTR CAA 90 bp CTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGACCAATAAAGAACAATTaGAACATGGGCCTTCAGTTT +
Preference number: 5 (lower is better)
Translates to: LSKKSCTRWILHGVSCTRPIKNN*NMGLQF
Trigger: AAACTGAAGGCCCATGTTCAAATTGTTCTTTATTGG...TCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536444.5
CDS-3UTR CAA 90 bp GTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATTAAAAATGTAGCAAACTaGCATTCCCAAACTGGGAGA +
Preference number: 5 (lower is better)
Translates to: VQEILHKVDFTWGIMHKIKNVAN*HSQTGR
Trigger: TCTCCCAGTTTGGGAATGCAAGTTTGCTACATTTTT...AATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000536444.5
CDS-3UTR CAA 90 bp GAAACTAAAAAGGTAACCGTGGAGTGGAAACTGCTACTAGAAAGTCTGTTATCAATCCCCAAAAGGTGTTaGATTGCCCAGTTACCTTAT +
Preference number: 5 (lower is better)
Translates to: ETKKVTVEWKLLLESLLSIPKRC*IAQLPY
Trigger: ATAAGGTAACTGGGCAATCAAACACCTTTTGGGGAT...TGATAACAGACTTTCTAGTAGCAGTTTCCACTCCACGGTTACCTTTTTAGTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000536444.5
CDS-3UTR CAA 90 bp TGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATTTGCCATTTAACAGCTaGACATCAGTTTTCAACAGT +
Preference number: 5 (lower is better)
Translates to: CPRNLAQGGFYMGYHAQDLPFNS*TSVFNS
Trigger: ACTGTTGAAAACTGATGTCAAGCTGTTAAATGGCAA...ATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CAA 90 bp TATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATTCTCCATTTTCATGGTaGCCATTTAACAGCTTGACA +
Preference number: 5 (lower is better)
Translates to: YTHICPRNLAQGGFYMGYSPFSW*PFNSLT
Trigger: TGTCAAGCTGTTAAATGGCAACCATGAAAATGGAGA...ATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CAA 90 bp GAAACTAAAAAGGTAACCGTGGAGTGGAAACTGCTACTAGAAAGTCTGTTATCAAGAGCACGTTTCATTTaGCGATATAACTTCAGACTC +
Preference number: 5 (lower is better)
Translates to: ETKKVTVEWKLLLESLLSRARFI*RYNFRL
Trigger: GAGTCTGAAGTTATATCGCAAAATGAAACGTGCTCT...TGATAACAGACTTTCTAGTAGCAGTTTCCACTCCACGGTTACCTTTTTAGTTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536444.5
CDS-3UTR CAA 90 bp AGTGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGTCTTCTTCCTCAGGTTaGTTGTCCTTTTCATTACTT +
Preference number: 5 (lower is better)
Translates to: SVYTHLSKKSCTRWILHGSSSSG*LSFSLL
Trigger: AAGTAATGAAAAGGACAACAAACCTGAGGAAGAAGA...CCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CAA 90 bp AACACCCACACATATTCCCCAGCCTCAAAACTAAAGCAAGGTACACATTTACATCGTTTAGACTGTACATaGTCCATGTCTTCTGATTTA +
Preference number: 5 (lower is better)
Translates to: NTHTYSPASKLKQGTHLHRLDCT*SMSSDL
Trigger: TAAATCAGAAGACATGGACAATGTACAGTCTAAACG...ATGTAAATGTGTACCTTGCTTTAGTTTTGAGGCTGGGGAATATGTGTGGGTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536444.5
ENST00000544627.5
CDS-3UTR CAA 90 bp GTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTAGGCTGTAATCTTTACTaGAAATTCTGCCTCATATTC +
Preference number: 5 (lower is better)
Translates to: VYTHLSKKSCTRWILHGVGCNLY*KFCLIF
Trigger: GAATATGAGGCAGAATTTCAAGTAAAGATTACAGCC...TACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CAA 90 bp AGTGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGCCACTGTATAACCTTTaGAAGTTTCTGGTTAATGTC +
Preference number: 5 (lower is better)
Translates to: SVYTHLSKKSCTRWILHGPLYNL*KFLVNV
Trigger: GACATTAACCAGAAACTTCAAAAGGTTATACAGTGG...CCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CAA 90 bp TATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATTTCTTAAGATCTTCTTaGGCTGCTTCAAAGCGTTTG +
Preference number: 5 (lower is better)
Translates to: YTHICPRNLAQGGFYMGYFLRSS*AASKRL
Trigger: CAAACGCTTTGAAGCAGCCAAAGAAGATCTTAAGAA...ATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CAA 90 bp AAATGTAGTGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTATGTATTCACAGGAGTTaGAAAGGATGGTGGTGCACT +
Preference number: 5 (lower is better)
Translates to: KCSVYTHLSKKSCTRWILCIHRS*KGWWCT
Trigger: AGTGCACCACCATCCTTTCAAACTCCTGTGAATACA...TAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACACTACATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CAA 90 bp TACACTGCAGAATGGCTAAATCTAGCTGACATATGCATGATCTCACATACTTACAAGGATACTGGATTTTaGGTAAGACCACTCACTGTA +
Preference number: 5 (lower is better)
Translates to: YTAEWLNLADICMISHTYKDTGF*VRPLTV
Trigger: TACAGTGAGTGGTCTTACCAAAAATCCAGTATCCTT...GTAAGTATGTGAGATCATGCATATGTCAGCTAGATTTAGCCATTCTGCAGTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR CAA 90 bp TTTCACCTAATTAACAACTCAGGAGACCAGACAAAAGAAACAACAAATAGATCCGGCACAGAAGGAACGTaGTTTGGTTTAGTGGGATTT +
Preference number: 5 (lower is better)
Translates to: FHLINNSGDQTKETTNRSGTEGT*FGLVGF
Trigger: AAATCCCACTAAACCAAACAACGTTCCTTCTGTGCC...GGATCTATTTGTTGTTTCTTTTGTCTGGTCTCCTGAGTTGTTAATTAGGTGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536444.5
ENST00000544627.5
CDS-3UTR CAA 90 bp AATGAAAATGGGAGACTCCAATGCAATAACACCTACATAAGGAAAAACACACATAGAAGTCCTTGTGGCTaGTACAATAGAGTGTGCTGT +
Preference number: 5 (lower is better)
Translates to: NENGRLQCNNTYIRKNTHRSPCG*YNRVCC
Trigger: ACAGCACACTCTATTGTACAAGCCACAAGGACTTCT...ATGTGTGTTTTTCCTTATGTAGGTGTTATTGCATTGGAGTCTCCCATTTTCATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536444.5
ENST00000544627.5
CDS-3UTR CAA 90 bp AAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATTAAAAAACTGTAACACTATTTaGGGGATTGACCTGCCGAAC +
Preference number: 5 (lower is better)
Translates to: KKSCTRWILHGVSCTRLKNCNTI*GIDLPN
Trigger: GTTCGGCAGGTCAATCCCCAAAATAGTGTTACAGTT...TTTTAATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CAA 90 bp CAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATTAAAAACATATGTGGTTGTTaGAGGCACTCGAACTGTAAC +
Preference number: 5 (lower is better)
Translates to: QEILHKVDFTWGIMHKIKNICGC*RHSNCN
Trigger: GTTACAGTTCGAGTGCCTCAAACAACCACATATGTT...TTTAATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CAA 90 bp CAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATTAAAAAGAGATCACATCTGTaGACTGAGGATCACAGAAAG +
Preference number: 5 (lower is better)
Translates to: QEILHKVDFTWGIMHKIKKRSHL*TEDHRK
Trigger: CTTTCTGTGATCCTCAGTCAACAGATGTGATCTCTT...TTTAATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CAA 90 bp GTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCTTTGGGTTTTGTTTaGATTCTGTTTGACCCACTT +
Preference number: 5 (lower is better)
Translates to: VYTHLSKKSCTRWILHGVSLGFV*ILFDPL
Trigger: AAGTGGGTCAAACAGAATCAAAACAAAACCCAAAGA...TACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000536444.5
ENST00000544627.5
CDS-3UTR CAA 90 bp AGAATCATGCCAGTTACACATCTCAAATCCTTTGATCTACTTACTTCGTACTTTATCCTACATTGCAGGTaGCAGTATCAGGTTTCCAGA +
Preference number: 5 (lower is better)
Translates to: RIMPVTHLKSFDLLTSYFILHCR*QYQVSR
Trigger: TCTGGAAACCTGATACTGCAACCTGCAATGTAGGAT...AAAGTACGAAGTAAGTAGATCAAAGGATTTGAGATGTGTAACTGGCATGATTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536444.5
CDS TCA 90 bp AGACATGTTATTATTGCTGTTGACATCATTTACAGTTTTTCCTGGTaGTACTGGTGGGTTGGGTGGATGTTCATGTCTTTTCTTAAGATC +
Preference number: 5 (lower is better)
Translates to: RHVIIAVDIIYSFSW*YWWVGWMFMSFLKI
Trigger: GATCTTAAGAAAAGACATGAACATCCACCCAACCCACCAGTATCACCAGGAAAAACTGTAAATGATGTCAACAGCAATAATAACATGTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000261168.9
ENST00000536444.5
ENST00000537653.5
ENST00000539659.5
ENST00000540793.5
ENST00000541654.1
ENST00000543189.5
ENST00000544627.5
CDS CCA 90 bp GTTTCTACAAGATCTGCAGAAGTTTCATCTTCATTCTTTTCACCTTaGTCAATTTCCATACTGCTAGATATAGCATCTTCTCCAAGAGCA +
Preference number: 5 (lower is better)
Translates to: VSTRSAEVSSSFFSP*SISILLDIASSPRA
Trigger: TGCTCTTGGAGAAGATGCTATATCTAGCAGTATGGAAATTGACCAAGGTGAAAAGAATGAAGATGAAACTTCTGCAGATCTTGTAGAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000261168.9
ENST00000396279.2
ENST00000536444.5
ENST00000537653.5
ENST00000539659.5
ENST00000540793.5
ENST00000541654.1
ENST00000543189.5
ENST00000544627.5
CDS-3UTR CAA 90 bp AAATGTAGTGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTATTTCCAAAGGTGAGGTaGGGTCCAAATCTCCATTTT +
Preference number: 5 (lower is better)
Translates to: KCSVYTHLSKKSCTRWILFPKVR*GPNLHF
Trigger: AAAATGGAGATTTGGACCCAACCTCACCTTTGGAAA...TAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACACTACATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CAA 90 bp TACACTGCAGAATGGCTAAATCTAGCTGACATATGCATGATCTCACATACTTACTTCATTCTTTTCACCTaGGTCAATTTCCATACTGCT +
Preference number: 5 (lower is better)
Translates to: YTAEWLNLADICMISHTYFILFT*VNFHTA
Trigger: AGCAGTATGGAAATTGACCAAGGTGAAAAGAATGAA...GTAAGTATGTGAGATCATGCATATGTCAGCTAGATTTAGCCATTCTGCAGTGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543189.5
CDS-3UTR CAA 90 bp TATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATTCTTCTTCCTCAGGTTaGTTGTCCTTTTCATTACTT +
Preference number: 5 (lower is better)
Translates to: YTHICPRNLAQGGFYMGYSSSSG*LSFSLL
Trigger: AAGTAATGAAAAGGACAACAAACCTGAGGAAGAAGA...ATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CAA 90 bp AACAAATGTAGTGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTGAGAAGAACTCATGGTaGATACAGGAGTGTGATTTA +
Preference number: 5 (lower is better)
Translates to: NKCSVYTHLSKKSCTRWIEKNSW*IQECDL
Trigger: TAAATCACACTCCTGTATCAACCATGAGTTCTTCTC...AATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACACTACATTTGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CAA 90 bp CAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATTAAATCTGTCCAAGAAATCTaGCACAAGGTGGATTTTACA +
Preference number: 5 (lower is better)
Translates to: QEILHKVDFTWGIMHKIKSVQEI*HKVDFT
Trigger: TGTAAAATCCACCTTGTGCAAGATTTCTTGGACAGA...TTTAATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CAA 90 bp AAATGTAGTGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTAACAGGCATTACTTTGTaGACCTTGTACAGTACTGGA +
Preference number: 5 (lower is better)
Translates to: KCSVYTHLSKKSCTRWILTGITL*TLYSTG
Trigger: TCCAGTACTGTACAAGGTCAACAAAGTAATGCCTGT...TAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACACTACATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536444.5
CDS-3UTR CAA 90 bp AAATGTAGTGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTATTCAACAGTTCTTCTTaGACCTTGTACACTGCTTCA +
Preference number: 5 (lower is better)
Translates to: KCSVYTHLSKKSCTRWILFNSSS*TLYTAS
Trigger: TGAAGCAGTGTACAAGGTCAAAGAAGAACTGTTGAA...TAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACACTACATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CAA 90 bp AAATGTAGTGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTATCTCCATTTTCATGGTaGCCATTTAACAGCTTGACA +
Preference number: 5 (lower is better)
Translates to: KCSVYTHLSKKSCTRWILSPFSW*PFNSLT
Trigger: TGTCAAGCTGTTAAATGGCAACCATGAAAATGGAGA...TAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACACTACATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CAA 90 bp AATGAAAATGGGAGACTCCAATGCAATAACACCTACATAAGGAAAAACACACATAAACTGGTACAGACTTaGGTTCAAAGGTACGATCAA +
Preference number: 5 (lower is better)
Translates to: NENGRLQCNNTYIRKNTHKLVQT*VQRYDQ
Trigger: TTGATCGTACCTTTGAACCAAAGTCTGTACCAGTTT...ATGTGTGTTTTTCCTTATGTAGGTGTTATTGCATTGGAGTCTCCCATTTTCATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536444.5
ENST00000544627.5
CDS-3UTR CAA 90 bp AACAAATGTAGTGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTCATTCTTTTCACCTaGGTCAATTTCCATACTGCT +
Preference number: 5 (lower is better)
Translates to: NKCSVYTHLSKKSCTRWIFILFT*VNFHTA
Trigger: AGCAGTATGGAAATTGACCAAGGTGAAAAGAATGAA...AATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACACTACATTTGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CAA 90 bp CAAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATTAAACGTTTAGACTGTACATaGTCCATGTCTTCTGATTTA +
Preference number: 5 (lower is better)
Translates to: QEILHKVDFTWGIMHKIKRLDCT*SMSSDL
Trigger: TAAATCAGAAGACATGGACAATGTACAGTCTAAACG...TTTAATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CAA 90 bp AAATGTAGTGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTAAAGGATACTGGATTTTaGGTAAGACCACTCACTGTA +
Preference number: 5 (lower is better)
Translates to: KCSVYTHLSKKSCTRWILKDTGF*VRPLTV
Trigger: TACAGTGAGTGGTCTTACCAAAAATCCAGTATCCTT...TAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACACTACATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CAA 90 bp AATGAAAATGGGAGACTCCAATGCAATAACACCTACATAAGGAAAAACACACATAAGGATACTGGATTTTaGGTAAGACCACTCACTGTA +
Preference number: 5 (lower is better)
Translates to: NENGRLQCNNTYIRKNTHKDTGF*VRPLTV
Trigger: TACAGTGAGTGGTCTTACCAAAAATCCAGTATCCTT...ATGTGTGTTTTTCCTTATGTAGGTGTTATTGCATTGGAGTCTCCCATTTTCATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000536444.5
ENST00000544627.5
CDS-3UTR CAA 90 bp AAATGTAGTGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTAGAGAAGAACTCATGGTaGATACAGGAGTGTGATTTA +
Preference number: 5 (lower is better)
Translates to: KCSVYTHLSKKSCTRWILEKNSW*IQECDL
Trigger: TAAATCACACTCCTGTATCAACCATGAGTTCTTCTC...TAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACACTACATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CAA 90 bp AACAAATGTAGTGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTATTACTTTGTTGACCTaGTACAGTACTGGAAAGTTC +
Preference number: 5 (lower is better)
Translates to: NKCSVYTHLSKKSCTRWIITLLT*YSTGKF
Trigger: GAACTTTCCAGTACTGTACAAGGTCAACAAAGTAAT...AATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACACTACATTTGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536444.5
CDS-3UTR CAA 90 bp ACATATCAACATTGCAACCACTGCAGGTCAAAACATATACATGCAGATATAGACTGCAAATACTGGGACTaGACTTTTCTGGAAATTAGA +
Preference number: 5 (lower is better)
Translates to: TYQHCNHCRSKHIHADIDCKYWD*TFLEIR
Trigger: TCTAATTTCCAGAAAAGTCAAGTCCCAGTATTTGCA...GTCTATATCTGCATGTATATGTTTTGACCTGCAGTGGTTGCAATGTTGATATGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536444.5
CDS CCA 90 bp ATCATCTTTATTGCTACTTGGTTCTATATTGTCAATTTCAGGAACTaGTTCACAAACTGGTACAGACTTTGGTTCAAAGGTACGATCAAA +
Preference number: 5 (lower is better)
Translates to: IIFIATWFYIVNFRN*FTNWYRLWFKGTIK
Trigger: TTTGATCGTACCTTTGAACCAAAGTCTGTACCAGTTTGTGAACCAGTTCCTGAAATTGACAATATAGAACCAAGTAGCAATAAAGATGAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000261168.9
ENST00000396279.2
ENST00000536444.5
ENST00000537653.5
ENST00000539659.5
ENST00000540793.5
ENST00000541654.1
ENST00000543189.5
ENST00000544627.5
CDS-3UTR CAA 90 bp AGAATCATGCCAGTTACACATCTCAAATCCTTTGATCTACTTACTTCGTACTTTTTCATTCTTTTCACCTaGGTCAATTTCCATACTGCT +
Preference number: 5 (lower is better)
Translates to: RIMPVTHLKSFDLLTSYFFILFT*VNFHTA
Trigger: AGCAGTATGGAAATTGACCAAGGTGAAAAGAATGAA...AAAGTACGAAGTAAGTAGATCAAAGGATTTGAGATGTGTAACTGGCATGATTCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536444.5
ENST00000544627.5
CDS-3UTR CAA 90 bp AAGAAATCTTGCACAAGGTGGATTTTACATGGGGTATCATGCACAAGATTAAAATTCATTCTTTTCACCTaGGTCAATTTCCATACTGCT +
Preference number: 5 (lower is better)
Translates to: KKSCTRWILHGVSCTRLKFILFT*VNFHTA
Trigger: AGCAGTATGGAAATTGACCAAGGTGAAAAGAATGAA...TTTTAATCTTGTGCATGATACCCCATGTAAAATCCACCTTGTGCAAGATTTCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS-3UTR CAA 90 bp GTGATAAAACAACAAAATCTTAGGATGTTGAGGATACTGAATTGGCCCAAGAAACGTTTAGACTGTACATaGTCCATGTCTTCTGATTTA +
Preference number: 5 (lower is better)
Translates to: VIKQQNLRMLRILNWPKKRLDCT*SMSSDL
Trigger: TAAATCAGAAGACATGGACAATGTACAGTCTAAACG...TTTCTTGGGCCAATTCAGTATCCTCAACATCCTAAGATTTTGTTGTTTTATCAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536444.5
CDS-3UTR CAA 90 bp TTTCACCTAATTAACAACTCAGGAGACCAGACAAAAGAAACAACAAATAGATCCGGCTGTAATCTTTACTaGAAATTCTGCCTCATATTC +
Preference number: 5 (lower is better)
Translates to: FHLINNSGDQTKETTNRSGCNLY*KFCLIF
Trigger: GAATATGAGGCAGAATTTCAAGTAAAGATTACAGCC...GGATCTATTTGTTGTTTCTTTTGTCTGGTCTCCTGAGTTGTTAATTAGGTGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536444.5
ENST00000544627.5
CDS-3UTR CAA 90 bp AGAATCATGCCAGTTACACATCTCAAATCCTTTGATCTACTTACTTCGTACTTTCCACTGTATAACCTTTaGAAGTTTCTGGTTAATGTC +
Preference number: 5 (lower is better)
Translates to: RIMPVTHLKSFDLLTSYFPLYNL*KFLVNV
Trigger: GACATTAACCAGAAACTTCAAAAGGTTATACAGTGG...AAAGTACGAAGTAAGTAGATCAAAGGATTTGAGATGTGTAACTGGCATGATTCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536444.5
ENST00000544627.5
CDS-3UTR CAA 90 bp AAATGTAGTGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTACAATATGGTTTTCTCTaGGTCCACTTTACACAAAGT +
Preference number: 5 (lower is better)
Translates to: KCSVYTHLSKKSCTRWILQYGFL*VHFTQS
Trigger: ACTTTGTGTAAAGTGGACCAAGAGAAAACCATATTG...TAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACACTACATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536444.5
CDS-3UTR CAA 90 bp AAATGTAGTGTATACACACATCTGTCCAAGAAATCTTGCACAAGGTGGATTTTAAAACAAAACATGTGTTaGCATTATCCTATTCCTCCC +
Preference number: 5 (lower is better)
Translates to: KCSVYTHLSKKSCTRWILKQNMC*HYPIPP
Trigger: GGGAGGAATAGGATAATGCAAACACATGTTTTGTTT...TAAAATCCACCTTGTGCAAGATTTCTTGGACAGATGTGTGTATACACTACATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000536444.5
CDS CCA 72 bp TGGGTGCACGGGGCGTGGGGGCTCAGTATGCACTTGTaGTGGTCGGTGATGCACTGTGAGCTGAGGTCCTGT +
Preference number: 6 (lower is better)
Translates to: WVHGAWGLSMHL*WSVMHCELRSC
Trigger: ACAGGACCTCAGCTCACAGTGCATCACCGACCACCACAAGTGCATACTGAGCCCCCACGCCCCGTGCACCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261168.9
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS CCA 72 bp GGAGGCTGGATCTCCGGCATCCAGATCACCAGGGGCTaGATCACCAGAAACTGGTTCAGCAGGCAGTTTAGA +
Preference number: 6 (lower is better)
Translates to: GGWISGIQITRG*ITRNWFSRQFR
Trigger: TCTAAACTGCCTGCTGAACCAGTTTCTGGTGATCCAGCCCCTGGTGATCTGGATGCCGGAGATCCAGCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000261168.9
ENST00000396279.2
ENST00000534828.1
ENST00000536444.5
ENST00000537653.5
ENST00000539057.1
ENST00000539659.5
ENST00000540793.5
ENST00000541056.1
ENST00000541654.1
ENST00000542967.1
ENST00000543189.5
ENST00000544627.5
ENST00000545769.1
CDS CCA 72 bp CTAACTTCAAGTGTGGCTTCTGAGGCAGAGATGTGCTaGCAGCTTCTGGGGGCAGACGCTGTGGTTGTGGAG +
Preference number: 6 (lower is better)
Translates to: LTSSVASEAEMC*QLLGADAVVVE
Trigger: CTCCACAACCACAGCGTCTGCCCCCAGAAGCTGCCAGCACATCTCTGCCTCAGAAGCCACACTTGAAGTTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261168.9
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS CCA 72 bp GGTGGTCTGAGATGGTCCACTTGTTGGCACCCCAGATaGTTGAAGAGGCGGTGCTGGTTGTATGGGTTGCAA +
Preference number: 6 (lower is better)
Translates to: GGLRWSTCWHPR*LKRRCWLYGLQ
Trigger: TTGCAACCCATACAACCAGCACCGCCTCTTCAACCATCTGGGGTGCCAACAAGTGGACCATCTCAGACCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261168.9
ENST00000535738.1
ENST00000536444.5
ENST00000540793.5
ENST00000543189.5
ENST00000544627.5
CDS CAA 72 bp GGTCTGAGATGGTCCACTTGTTGGCACCCCAGATGGTaGAAGAGGCGGTGCTGGTTGTATGGGTTGCAATGG +
Preference number: 6 (lower is better)
Translates to: GLRWSTCWHPRW*KRRCWLYGLQW
Trigger: CCATTGCAACCCATACAACCAGCACCGCCTCTTCAACCATCTGGGGTGCCAACAAGTGGACCATCTCAGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261168.9
ENST00000535738.1
ENST00000536444.5
ENST00000540793.5
ENST00000543189.5
ENST00000544627.5
CDS CAA 72 bp CTCGCAAGGGAGCCTGAGCTGGTGGTGCAGGAAGAGTaGTATAAACCACCTGGTGGTTTGCAGGAGCTCTTG +
Preference number: 6 (lower is better)
Translates to: LAREPELVVQEE*YKPPGGLQELL
Trigger: CAAGAGCTCCTGCAAACCACCAGGTGGTTTATACAACTCTTCCTGCACCACCAGCTCAGGCTCCCTTGCGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261168.9
ENST00000535738.1
ENST00000536444.5
ENST00000540793.5
ENST00000543189.5
ENST00000544627.5
CDS TCA 72 bp GCTCAGTATGCACTTGTGGTGGTCGGTGATGCACTGTaGGCTGAGGTCCTGTTGATCCCAGGGTTAGTCCAT +
Preference number: 6 (lower is better)
Translates to: AQYALVVVGDAL*AEVLLIPGLVH
Trigger: ATGGACTAACCCTGGGATCAACAGGACCTCAGCTCACAGTGCATCACCGACCACCACAAGTGCATACTGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261168.9
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS CCA 72 bp GGCATCCAGATCACCAGGGGCTGGATCACCAGAAACTaGTTCAGCAGGCAGTTTAGAGACTGGTTCTGGAGT +
Preference number: 6 (lower is better)
Translates to: GIQITRGWITRN*FSRQFRDWFWS
Trigger: ACTCCAGAACCAGTCTCTAAACTGCCTGCTGAACCAGTTTCTGGTGATCCAGCCCCTGGTGATCTGGATGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000261168.9
ENST00000396279.2
ENST00000534828.1
ENST00000536444.5
ENST00000537653.5
ENST00000539057.1
ENST00000539659.5
ENST00000540793.5
ENST00000541056.1
ENST00000541654.1
ENST00000542967.1
ENST00000543189.5
ENST00000544627.5
ENST00000545769.1
CDS TCA 72 bp AGTGGCACAGCTTCGATCCACCTCCAGGACACTCCATaGCAGTACTATGCCATTTTGACTCTGAACGCGTGC +
Preference number: 6 (lower is better)
Translates to: SGTASIHLQDTP*QYYAILTLNAC
Trigger: GCACGCGTTCAGAGTCAAAATGGCATAGTACTGTCATGGAGTGTCCTGGAGGTGGATCGAAGCTGTGCCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261168.9
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS GCA 72 bp GGCACTCGAACTGTAACACTATTTTGGGGATTGACCTaGCGAACAGCAGGAGCCTGCATAACAGTTCCTCGC +
Preference number: 6 (lower is better)
Translates to: GTRTVTLFWGLT*RTAGACITVPR
Trigger: GCGAGGAACTGTTATGCAGGCTCCTGCTGTTCGGCAGGTCAATCCCCAAAATAGTGTTACAGTTCGAGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261168.9
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS CCA 72 bp CTGCATAACAGTTCCTCGCAAGGGAGCCTGAGCTGGTaGTGCAGGAAGAGTTGTATAAACCACCTGGTGGTT +
Preference number: 6 (lower is better)
Translates to: LHNSSSQGSLSW*CRKSCINHLVV
Trigger: AACCACCAGGTGGTTTATACAACTCTTCCTGCACCACCAGCTCAGGCTCCCTTGCGAGGAACTGTTATGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261168.9
ENST00000535738.1
ENST00000536444.5
ENST00000540793.5
ENST00000543189.5
ENST00000544627.5
CDS CAA 72 bp GTAGTAAGTGTATGGTGGTCTGAGATGGTCCACTTGTaGGCACCCCAGATGGTTGAAGAGGCGGTGCTGGTT +
Preference number: 6 (lower is better)
Translates to: VVSVWWSEMVHL*APQMVEEAVLV
Trigger: AACCAGCACCGCCTCTTCAACCATCTGGGGTGCCAACAAGTGGACCATCTCAGACCACCATACACTTACTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261168.9
ENST00000535738.1
ENST00000536444.5
ENST00000540793.5
ENST00000543189.5
ENST00000544627.5
CDS CAA 90 bp CCTGAGCTGGTGGTGCAGGAAGAGTTGTATAAACCACCTGGTGGTTaGCAGGAGCTCTTGGTACAGGGAGTCTTGTGGTCACCTGAGTTA +
Preference number: 6 (lower is better)
Translates to: PELVVQEELYKPPGG*QELLVQGVLWSPEL
Trigger: TAACTCAGGTGACCACAAGACTCCCTGTACCAAGAGCTCCTGCAAACCACCAGGTGGTTTATACAACTCTTCCTGCACCACCAGCTCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261168.9
ENST00000535738.1
ENST00000536444.5
ENST00000540793.5
ENST00000543189.5
ENST00000544627.5
CDS CAA 90 bp GTGCAGGAAGAGTTGTATAAACCACCTGGTGGTTTGCAGGAGCTCTaGGTACAGGGAGTCTTGTGGTCACCTGAGTTACTGGACGATGTG +
Preference number: 6 (lower is better)
Translates to: VQEELYKPPGGLQEL*VQGVLWSPELLDDV
Trigger: CACATCGTCCAGTAACTCAGGTGACCACAAGACTCCCTGTACCAAGAGCTCCTGCAAACCACCAGGTGGTTTATACAACTCTTCCTGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261168.9
ENST00000535738.1
ENST00000536444.5
ENST00000540793.5
ENST00000543189.5
ENST00000544627.5
CDS CAA 90 bp GATACAAACTGGGTGAGAGTACATGCCATGGGCAAGGGAAGTGCCTaGACTTCCCCAATCTTTTTCCATTGTGAGGGCACAGTGGCACTG +
Preference number: 6 (lower is better)
Translates to: DTNWVRVHAMGKGSA*TSPIFFHCEGTVAL
Trigger: CAGTGCCACTGTGCCCTCACAATGGAAAAAGATTGGGGAAGTCAAGGCACTTCCCTTGCCCATGGCATGTACTCTCACCCAGTTTGTATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261168.9
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS TCA 72 bp AGCAACTACAGTAGCTGTATTGGGTGCAGGAAGAACTaGCGTTGCTGTGAGGGAACCCGAAGTCACTGGAGT +
Preference number: 6 (lower is better)
Translates to: SNYSSCIGCRKN*RCCEGTRSHWS
Trigger: ACTCCAGTGACTTCGGGTTCCCTCACAGCAACGTCAGTTCTTCCTGCACCCAATACAGCTACTGTAGTTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000261168.9
ENST00000536444.5
ENST00000537653.5
ENST00000540793.5
ENST00000541654.1
ENST00000543189.5
ENST00000544627.5
CDS GCA 72 bp TGGAACAGCCTGCACAGCAAGTGTTGTTCCCAATGGTaGAGCACTGGCAGTAGGGTTCCTTTGAATACTAGG +
Preference number: 6 (lower is better)
Translates to: WNSLHSKCCSQW*STGSRVPLNTR
Trigger: CCTAGTATTCAAAGGAACCCTACTGCCAGTGCTGCACCATTGGGAACAACACTTGCTGTGCAGGCTGTTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000261168.9
ENST00000536444.5
ENST00000537653.5
ENST00000540793.5
ENST00000541654.1
ENST00000543189.5
ENST00000544627.5
CDS GCA 72 bp TGGTGCAGGAAGAGTTGTATAAACCACCTGGTGGTTTaGAGGAGCTCTTGGTACAGGGAGTCTTGTGGTCAC +
Preference number: 6 (lower is better)
Translates to: WCRKSCINHLVV*RSSWYRESCGH
Trigger: GTGACCACAAGACTCCCTGTACCAAGAGCTCCTGCAAACCACCAGGTGGTTTATACAACTCTTCCTGCACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261168.9
ENST00000535738.1
ENST00000536444.5
ENST00000540793.5
ENST00000543189.5
ENST00000544627.5
CDS CCA 72 bp CCTCATGGTAAGCATAGAGATGGTAGCTATCAACAGTaGCACAGCTTCGATCCACCTCCAGGACACTCCATG +
Preference number: 6 (lower is better)
Translates to: PHGKHRDGSYQQ*HSFDPPPGHSM
Trigger: CATGGAGTGTCCTGGAGGTGGATCGAAGCTGTGCCACTGTTGATAGCTACCATCTCTATGCTTACCATGAGG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261168.9
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS CAA 72 bp CCTGGTGGTTTGCAGGAGCTCTTGGTACAGGGAGTCTaGTGGTCACCTGAGTTACTGGACGATGTGTTACAT +
Preference number: 6 (lower is better)
Translates to: PGGLQELLVQGV*WSPELLDDVLH
Trigger: ATGTAACACATCGTCCAGTAACTCAGGTGACCACAAGACTCCCTGTACCAAGAGCTCCTGCAAACCACCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261168.9
ENST00000535738.1
ENST00000536444.5
ENST00000540793.5
ENST00000543189.5
ENST00000544627.5
CDS CAA 72 bp GTGGTGCAGGAAGAGTTGTATAAACCACCTGGTGGTTaGCAGGAGCTCTTGGTACAGGGAGTCTTGTGGTCA +
Preference number: 6 (lower is better)
Translates to: VVQEELYKPPGG*QELLVQGVLWS
Trigger: TGACCACAAGACTCCCTGTACCAAGAGCTCCTGCAAACCACCAGGTGGTTTATACAACTCTTCCTGCACCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261168.9
ENST00000535738.1
ENST00000536444.5
ENST00000540793.5
ENST00000543189.5
ENST00000544627.5
CDS TCA 72 bp TTAGTCACCAAAGTCCCTGGATGGCTCTGTAGAAGCTaGGGCTGGGAGGATACTGCAACAGGTACATGCAAA +
Preference number: 6 (lower is better)
Translates to: LVTKVPGWLCRS*GWEDTATGTCK
Trigger: TTTGCATGTACCTGTTGCAGTATCCTCCCAGCCTCAGCTTCTACAGAGCCATCCAGGGACTTTGGTGACTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000261168.9
ENST00000536444.5
ENST00000537653.5
ENST00000540793.5
ENST00000541654.1
ENST00000543189.5
ENST00000544627.5
CDS TCA 72 bp GTTCCCAATGGTGCAGCACTGGCAGTAGGGTTCCTTTaGATACTAGGACTGGGCACAGAAGGAACGTTGTTT +
Preference number: 6 (lower is better)
Translates to: VPNGAALAVGFL*ILGLGTEGTLF
Trigger: AAACAACGTTCCTTCTGTGCCCAGTCCTAGTATTCAAAGGAACCCTACTGCCAGTGCTGCACCATTGGGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000261168.9
ENST00000536444.5
ENST00000537653.5
ENST00000540793.5
ENST00000541654.1
ENST00000543189.5
ENST00000544627.5
CDS TCA 72 bp GCAGGAGCTCTTGGTACAGGGAGTCTTGTGGTCACCTaGGTTACTGGACGATGTGTTACATTCACGGTAGTT +
Preference number: 6 (lower is better)
Translates to: AGALGTGSLVVT*VTGRCVTFTVV
Trigger: AACTACCGTGAATGTAACACATCGTCCAGTAACTCAGGTGACCACAAGACTCCCTGTACCAAGAGCTCCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261168.9
ENST00000535738.1
ENST00000536444.5
ENST00000540793.5
ENST00000543189.5
ENST00000544627.5
CDS CCA 72 bp TGTTGGAACAGCCTGCACAGCAAGTGTTGTTCCCAATaGTGCAGCACTGGCAGTAGGGTTCCTTTGAATACT +
Preference number: 6 (lower is better)
Translates to: CWNSLHSKCCSQ*CSTGSRVPLNT
Trigger: AGTATTCAAAGGAACCCTACTGCCAGTGCTGCACCATTGGGAACAACACTTGCTGTGCAGGCTGTTCCAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000261168.9
ENST00000536444.5
ENST00000537653.5
ENST00000540793.5
ENST00000541654.1
ENST00000543189.5
ENST00000544627.5
CDS CCA 72 bp GGTGGTTTGCAGGAGCTCTTGGTACAGGGAGTCTTGTaGTCACCTGAGTTACTGGACGATGTGTTACATTCA +
Preference number: 6 (lower is better)
Translates to: GGLQELLVQGVL*SPELLDDVLHS
Trigger: TGAATGTAACACATCGTCCAGTAACTCAGGTGACCACAAGACTCCCTGTACCAAGAGCTCCTGCAAACCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261168.9
ENST00000535738.1
ENST00000536444.5
ENST00000540793.5
ENST00000543189.5
ENST00000544627.5
CDS CAA 72 bp GAGTTGTATAAACCACCTGGTGGTTTGCAGGAGCTCTaGGTACAGGGAGTCTTGTGGTCACCTGAGTTACTG +
Preference number: 6 (lower is better)
Translates to: ELYKPPGGLQEL*VQGVLWSPELL
Trigger: CAGTAACTCAGGTGACCACAAGACTCCCTGTACCAAGAGCTCCTGCAAACCACCAGGTGGTTTATACAACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261168.9
ENST00000535738.1
ENST00000536444.5
ENST00000540793.5
ENST00000543189.5
ENST00000544627.5
CDS GCA 72 bp GTATTTGCTACCAGATACAAACTGGGTGAGAGTACATaGCATGGGCAAGGGAAGTGCCTTGACTTCCCCAAT +
Preference number: 6 (lower is better)
Translates to: VFATRYKLGEST*HGQGKCLDFPN
Trigger: ATTGGGGAAGTCAAGGCACTTCCCTTGCCCATGGCATGTACTCTCACCCAGTTTGTATCTGGTAGCAAATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261168.9
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS CCA 72 bp GAAAGGATGGTGGTGCACTCTCGCTTACATTTCTTTTaGACTCCAGCATCTGTCTCACTGTGCCTGCATTTC +
Preference number: 6 (lower is better)
Translates to: ERMVVHSRLHFF*TPASVSLCLHF
Trigger: GAAATGCAGGCACAGTGAGACAGATGCTGGAGTCCAAAAGAAATGTAAGCGAGAGTGCACCACCATCCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261168.9
ENST00000536444.5
ENST00000537653.5
ENST00000540793.5
ENST00000543189.5
ENST00000544627.5
CDS CCA 72 bp AGAAGTCCTTGTGGCTTGTACAATAGAGTGTGCTGTTaGAACAGCCTGCACAGCAAGTGTTGTTCCCAATGG +
Preference number: 6 (lower is better)
Translates to: RSPCGLYNRVCC*NSLHSKCCSQW
Trigger: CCATTGGGAACAACACTTGCTGTGCAGGCTGTTCCAACAGCACACTCTATTGTACAAGCCACAAGGACTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000261168.9
ENST00000536444.5
ENST00000537653.5
ENST00000540793.5
ENST00000541654.1
ENST00000543189.5
ENST00000544627.5
CDS CCA 72 bp CCCCAATCTTTTTCCATTGTGAGGGCACAGTGGCACTaGGTTCCTCATGGTAAGCATAGAGATGGTAGCTAT +
Preference number: 6 (lower is better)
Translates to: PQSFSIVRAQWH*VPHGKHRDGSY
Trigger: ATAGCTACCATCTCTATGCTTACCATGAGGAACCCAGTGCCACTGTGCCCTCACAATGGAAAAAGATTGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261168.9
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS CAA 72 bp GAGGGAACCCGAAGTCACTGGAGTCTGCAATTTAGGTaGACTACTGACAACTGCTGGAGGAGTGACAAGATT +
Preference number: 6 (lower is better)
Translates to: EGTRSHWSLQFR*TTDNCWRSDKI
Trigger: AATCTTGTCACTCCTCCAGCAGTTGTCAGTAGTCAACCTAAATTGCAGACTCCAGTGACTTCGGGTTCCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000261168.9
ENST00000536444.5
ENST00000537653.5
ENST00000540793.5
ENST00000541654.1
ENST00000543189.5
ENST00000544627.5
CDS CAA 72 bp GTGGGATTTGGCAAGGATGGCAAGGATACTGGATTTTaGGTAAGACCACTCACTGTAGGTGGGCTTTGCACA +
Preference number: 6 (lower is better)
Translates to: VGFGKDGKDTGF*VRPLTVGGLCT
Trigger: TGTGCAAAGCCCACCTACAGTGAGTGGTCTTACCAAAAATCCAGTATCCTTGCCATCCTTGCCAAATCCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261168.9
ENST00000536444.5
ENST00000537653.5
ENST00000540793.5
ENST00000541654.1
ENST00000543189.5
ENST00000544627.5
CDS CAA 90 bp GTTCACAAACTGGTACAGACTTTGGTTCAAAGGTACGATCAAAGGTaGATTCAGAAGTCAGCTCATCAGAGGCCAGTTCACCAGTGGCCA +
Preference number: 6 (lower is better)
Translates to: VHKLVQTLVQRYDQR*IQKSAHQRPVHQWP
Trigger: TGGCCACTGGTGAACTGGCCTCTGATGAGCTGACTTCTGAATCAACCTTTGATCGTACCTTTGAACCAAAGTCTGTACCAGTTTGTGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000261168.9
ENST00000396279.2
ENST00000536444.5
ENST00000537653.5
ENST00000539659.5
ENST00000540793.5
ENST00000541654.1
ENST00000543189.5
ENST00000544627.5
CDS GCA 72 bp TTCGATCCACCTCCAGGACACTCCATGACAGTACTATaGCATTTTGACTCTGAACGCGTGCTAACTTCAAGT +
Preference number: 6 (lower is better)
Translates to: FDPPPGHSMTVL*HFDSERVLTSS
Trigger: ACTTGAAGTTAGCACGCGTTCAGAGTCAAAATGGCATAGTACTGTCATGGAGTGTCCTGGAGGTGGATCGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261168.9
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS CCA 72 bp TGGTTTAGTGGGATTTGGCAAGGATGGCAAGGATACTaGATTTTTGGTAAGACCACTCACTGTAGGTGGGCT +
Preference number: 6 (lower is better)
Translates to: WFSGIWQGWQGY*IFGKTTHCRWA
Trigger: AGCCCACCTACAGTGAGTGGTCTTACCAAAAATCCAGTATCCTTGCCATCCTTGCCAAATCCCACTAAACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000261168.9
ENST00000536444.5
ENST00000537653.5
ENST00000540793.5
ENST00000541654.1
ENST00000543189.5
ENST00000544627.5
CDS CAA 90 bp ACTGGTGGGTTGGGTGGATGTTCATGTCTTTTCTTAAGATCTTCTTaGGCTGCTTCAAAGCGTTTGGTTAACCTGGCTATCTTGGCCTGT +
Preference number: 6 (lower is better)
Translates to: TGGLGGCSCLFLRSS*AASKRLVNLAILAC
Trigger: ACAGGCCAAGATAGCCAGGTTAACCAAACGCTTTGAAGCAGCCAAAGAAGATCTTAAGAAAAGACATGAACATCCACCCAACCCACCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000261168.9
ENST00000536444.5
ENST00000537653.5
ENST00000539659.5
ENST00000540793.5
ENST00000541654.1
ENST00000543189.5
ENST00000544627.5
CDS TCA 72 bp TGGTACAGACTTTGGTTCAAAGGTACGATCAAAGGTTaGTTCAGAAGTCAGCTCATCAGAGGCCAGTTCACC +
Preference number: 6 (lower is better)
Translates to: WYRLWFKGTIKG*FRSQLIRGQFT
Trigger: GGTGAACTGGCCTCTGATGAGCTGACTTCTGAATCAACCTTTGATCGTACCTTTGAACCAAAGTCTGTACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000261168.9
ENST00000396279.2
ENST00000536444.5
ENST00000537653.5
ENST00000539659.5
ENST00000540793.5
ENST00000541654.1
ENST00000543189.5
ENST00000544627.5
CDS TCA 72 bp AAGATGGCTGCAATGTGCACTCAAGAACTCACACAGTaGAAACTCAGCTATGTAACAAACAAAGCCCCTCCC +
Preference number: 6 (lower is better)
Translates to: KMAAMCTQELTQ*KLSYVTNKAPP
Trigger: GGGAGGGGCTTTGTTTGTTACATAGCTGAGTTTTCACTGTGTGAGTTCTTGAGTGCACATTGCAGCCATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544627.5
CDS CCA 72 bp TTGAATACTAGGACTGGGCACAGAAGGAACGTTGTTTaGTTTAGTGGGATTTGGCAAGGATGGCAAGGATAC +
Preference number: 6 (lower is better)
Translates to: LNTRTGHRRNVV*FSGIWQGWQGY
Trigger: GTATCCTTGCCATCCTTGCCAAATCCCACTAAACCAAACAACGTTCCTTCTGTGCCCAGTCCTAGTATTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000261168.9
ENST00000536444.5
ENST00000537653.5
ENST00000540793.5
ENST00000541654.1
ENST00000543189.5
ENST00000544627.5
CDS CAA 72 bp CTGGTACAGACTTTGGTTCAAAGGTACGATCAAAGGTaGATTCAGAAGTCAGCTCATCAGAGGCCAGTTCAC +
Preference number: 6 (lower is better)
Translates to: LVQTLVQRYDQR*IQKSAHQRPVH
Trigger: GTGAACTGGCCTCTGATGAGCTGACTTCTGAATCAACCTTTGATCGTACCTTTGAACCAAAGTCTGTACCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000261168.9
ENST00000396279.2
ENST00000536444.5
ENST00000537653.5
ENST00000539659.5
ENST00000540793.5
ENST00000541654.1
ENST00000543189.5
ENST00000544627.5
CDS CAA 72 bp AAACTCAGCTATGTAACAAACAAAGCCCCTCCCACTTaGTCAGCCTGCAGGAAACTGAACATAGACAACAGC +
Preference number: 6 (lower is better)
Translates to: KLSYVTNKAPPT*SACRKLNIDNS
Trigger: GCTGTTGTCTATGTTCAGTTTCCTGCAGGCTGACAAAGTGGGAGGGGCTTTGTTTGTTACATAGCTGAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544627.5
CDS CCA 72 bp AGGAACGTTGTTTGGTTTAGTGGGATTTGGCAAGGATaGCAAGGATACTGGATTTTTGGTAAGACCACTCAC +
Preference number: 6 (lower is better)
Translates to: RNVVWFSGIWQG*QGYWIFGKTTH
Trigger: GTGAGTGGTCTTACCAAAAATCCAGTATCCTTGCCATCCTTGCCAAATCCCACTAAACCAAACAACGTTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000261168.9
ENST00000536444.5
ENST00000537653.5
ENST00000540793.5
ENST00000541654.1
ENST00000543189.5
ENST00000544627.5
CDS CAA 72 bp GTTAGCAGCCATTTTGAGACAGCTGCACAGTCTCAGTaGCACAAAAGTGTAATTAAGATGGCTGCAATGTGC +
Preference number: 6 (lower is better)
Translates to: VSSHFETAAQSQ*HKSVIKMAAMC
Trigger: GCACATTGCAGCCATCTTAATTACACTTTTGTGCAACTGAGACTGTGCAGCTGTCTCAAAATGGCTGCTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544627.5
CDS CAA 90 bp TTTGGTTTAGTGGGATTTGGCAAGGATGGCAAGGATACTGGATTTTaGGTAAGACCACTCACTGTAGGTGGGCTTTGCACAGAAATGAAT +
Preference number: 6 (lower is better)
Translates to: FGLVGFGKDGKDTGF*VRPLTVGGLCTEMN
Trigger: ATTCATTTCTGTGCAAAGCCCACCTACAGTGAGTGGTCTTACCAAAAATCCAGTATCCTTGCCATCCTTGCCAAATCCCACTAAACCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261168.9
ENST00000536444.5
ENST00000537653.5
ENST00000540793.5
ENST00000541654.1
ENST00000543189.5
ENST00000544627.5
CDS GCA 72 bp AGATACTGTATTCACAGGAGTTTGAAAGGATGGTGGTaGACTCTCGCTTACATTTCTTTTGGACTCCAGCAT +
Preference number: 6 (lower is better)
Translates to: RYCIHRSLKGWW*TLAYISFGLQH
Trigger: ATGCTGGAGTCCAAAAGAAATGTAAGCGAGAGTGCACCACCATCCTTTCAAACTCCTGTGAATACAGTATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261168.9
ENST00000536444.5
ENST00000537653.5
ENST00000540793.5
ENST00000543189.5
ENST00000544627.5
CDS CCA 72 bp GGATACTGGATTTTTGGTAAGACCACTCACTGTAGGTaGGCTTTGCACAGAAATGAATTCAACATTGCCAGA +
Preference number: 6 (lower is better)
Translates to: GYWIFGKTTHCR*ALHRNEFNIAR
Trigger: TCTGGCAATGTTGAATTCATTTCTGTGCAAAGCCCACCTACAGTGAGTGGTCTTACCAAAAATCCAGTATCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000261168.9
ENST00000536444.5
ENST00000537653.5
ENST00000540793.5
ENST00000541654.1
ENST00000543189.5
ENST00000544627.5
CDS CAA 72 bp CTTTTCTTAAGATCTTCTTTGGCTGCTTCAAAGCGTTaGGTTAACCTGGCTATCTTGGCCTGTAGTTCAGTG +
Preference number: 6 (lower is better)
Translates to: LFLRSSLAASKR*VNLAILACSSV
Trigger: CACTGAACTACAGGCCAAGATAGCCAGGTTAACCAAACGCTTTGAAGCAGCCAAAGAAGATCTTAAGAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000261168.9
ENST00000536444.5
ENST00000537653.5
ENST00000539659.5
ENST00000540793.5
ENST00000541654.1
ENST00000543189.5
ENST00000544627.5
CDS GCA 72 bp ATCAGTTTTCAACAGTTCTTCTTTGACCTTGTACACTaGTTCAAGTTGCTGACGATCACTCACTCTCATCGT +
Preference number: 6 (lower is better)
Translates to: ISFQQFFFDLVH*FKLLTITHSHR
Trigger: ACGATGAGAGTGAGTGATCGTCAGCAACTTGAAGCAGTGTACAAGGTCAAAGAAGAACTGTTGAAAACTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 20 transcripts:
ENST00000261168.9
ENST00000396279.2
ENST00000428217.6
ENST00000534828.1
ENST00000535132.1
ENST00000536279.1
ENST00000536444.5
ENST00000537653.5
ENST00000539057.1
ENST00000539659.5
ENST00000540793.5
ENST00000541056.1
ENST00000541654.1
ENST00000542514.5
ENST00000542967.1
ENST00000542991.1
ENST00000543189.5
ENST00000544627.5
ENST00000545723.1
ENST00000545769.1
CDS CCA 72 bp GATCACAGAAAGGCCCAAAACGTCCATAAATATCCTTaGCTCGTACTGCAAAGTAGTATTTGCTACCAGATA +
Preference number: 6 (lower is better)
Translates to: DHRKAQNVHKYP*LVLQSSICYQI
Trigger: TATCTGGTAGCAAATACTACTTTGCAGTACGAGCCAAGGATATTTATGGACGTTTTGGGCCTTTCTGTGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261168.9
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS CAA 72 bp TTGGGTGGATGTTCATGTCTTTTCTTAAGATCTTCTTaGGCTGCTTCAAAGCGTTTGGTTAACCTGGCTATC +
Preference number: 6 (lower is better)
Translates to: LGGCSCLFLRSS*AASKRLVNLAI
Trigger: GATAGCCAGGTTAACCAAACGCTTTGAAGCAGCCAAAGAAGATCTTAAGAAAAGACATGAACATCCACCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000261168.9
ENST00000536444.5
ENST00000537653.5
ENST00000539659.5
ENST00000540793.5
ENST00000541654.1
ENST00000543189.5
ENST00000544627.5
CDS CAA 90 bp GAGGTTGGGTCCAAATCTCCATTTTCATGGTTGCCATTTAACAGCTaGACATCAGTTTTCAACAGTTCTTCTTTGACCTTGTACACTGCT +
Preference number: 6 (lower is better)
Translates to: EVGSKSPFSWLPFNS*TSVFNSSSLTLYTA
Trigger: AGCAGTGTACAAGGTCAAAGAAGAACTGTTGAAAACTGATGTCAAGCTGTTAAATGGCAACCATGAAAATGGAGATTTGGACCCAACCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 20 transcripts:
ENST00000261168.9
ENST00000396279.2
ENST00000428217.6
ENST00000534828.1
ENST00000535132.1
ENST00000536279.1
ENST00000536444.5
ENST00000537653.5
ENST00000539057.1
ENST00000539659.5
ENST00000540793.5
ENST00000541056.1
ENST00000541654.1
ENST00000542514.5
ENST00000542967.1
ENST00000542991.1
ENST00000543189.5
ENST00000544627.5
ENST00000545723.1
ENST00000545769.1
CDS TCA 72 bp TTCCTTGTCTTTAATGTAATCCATGTTTTCCAAAGGTaGGGTTGGGTCCAAATCTCCATTTTCATGGTTGCC +
Preference number: 6 (lower is better)
Translates to: FLVFNVIHVFQR*GWVQISIFMVA
Trigger: GGCAACCATGAAAATGGAGATTTGGACCCAACCTCACCTTTGGAAAACATGGATTACATTAAAGACAAGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 19 transcripts:
ENST00000261168.9
ENST00000396279.2
ENST00000428217.6
ENST00000534828.1
ENST00000535132.1
ENST00000536279.1
ENST00000536444.5
ENST00000537653.5
ENST00000539057.1
ENST00000539659.5
ENST00000540793.5
ENST00000541056.1
ENST00000541654.1
ENST00000542514.5
ENST00000542967.1
ENST00000543189.5
ENST00000544627.5
ENST00000545723.1
ENST00000545769.1
CDS TCA 72 bp ACAAGATTGGTTGAAGATACTGTATTCACAGGAGTTTaGAAGGATGGTGGTGCACTCTCGCTTACATTTCTT +
Preference number: 6 (lower is better)
Translates to: TRLVEDTVFTGV*KDGGALSLTFL
Trigger: AAGAAATGTAAGCGAGAGTGCACCACCATCCTTTCAAACTCCTGTGAATACAGTATCTTCAACCAATCTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261168.9
ENST00000536444.5
ENST00000537653.5
ENST00000540793.5
ENST00000543189.5
ENST00000544627.5
CDS TCA 72 bp AGGGTTAGTCCATTGTTTACAACATATGTGGTTGTTTaGGGCACTCGAACTGTAACACTATTTTGGGGATTG +
Preference number: 6 (lower is better)
Translates to: RVSPLFTTYVVV*GTRTVTLFWGL
Trigger: CAATCCCCAAAATAGTGTTACAGTTCGAGTGCCTCAAACAACCACATATGTTGTAAACAATGGACTAACCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261168.9
ENST00000536444.5
ENST00000540793.5
ENST00000544627.5
CDS CAA 72 bp AAAGGTGAGGTTGGGTCCAAATCTCCATTTTCATGGTaGCCATTTAACAGCTTGACATCAGTTTTCAACAGT +
Preference number: 6 (lower is better)
Translates to: KGEVGSKSPFSW*PFNSLTSVFNS
Trigger: ACTGTTGAAAACTGATGTCAAGCTGTTAAATGGCAACCATGAAAATGGAGATTTGGACCCAACCTCACCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 20 transcripts:
ENST00000261168.9
ENST00000396279.2
ENST00000428217.6
ENST00000534828.1
ENST00000535132.1
ENST00000536279.1
ENST00000536444.5
ENST00000537653.5
ENST00000539057.1
ENST00000539659.5
ENST00000540793.5
ENST00000541056.1
ENST00000541654.1
ENST00000542514.5
ENST00000542967.1
ENST00000542991.1
ENST00000543189.5
ENST00000544627.5
ENST00000545723.1
ENST00000545769.1
CDS CAA 72 bp TTCCTTTCAAATAGTGGTTCACATCTGTTGGGTAGTTaGTGCAGCATACATCCCATTTACCACAAAAGCCAA +
Preference number: 6 (lower is better)
Translates to: FLSNSGSHLLGS*CSIHPIYHKSQ
Trigger: TTGGCTTTTGTGGTAAATGGGATGTATGCTGCACAAACTACCCAACAGATGTGAACCACTATTTGAAAGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542991.1
CDS CAA 90 bp CTATATTGTCAATTTCAGGAACTGGTTCACAAACTGGTACAGACTTaGGTTCAAAGGTACGATCAAAGGTTGATTCAGAAGTCAGCTCAT +
Preference number: 6 (lower is better)
Translates to: LYCQFQELVHKLVQT*VQRYDQRLIQKSAH
Trigger: ATGAGCTGACTTCTGAATCAACCTTTGATCGTACCTTTGAACCAAAGTCTGTACCAGTTTGTGAACCAGTTCCTGAAATTGACAATATAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000261168.9
ENST00000396279.2
ENST00000536444.5
ENST00000537653.5
ENST00000539659.5
ENST00000540793.5
ENST00000541654.1
ENST00000543189.5
ENST00000544627.5
CDS CAA 90 bp CGTTTCTACAAGATCTGCAGAAGTTTCATCTTCATTCTTTTCACCTaGGTCAATTTCCATACTGCTAGATATAGCATCTTCTCCAAGAGC +
Preference number: 6 (lower is better)
Translates to: RFYKICRSFIFILFT*VNFHTARYSIFSKS
Trigger: GCTCTTGGAGAAGATGCTATATCTAGCAGTATGGAAATTGACCAAGGTGAAAAGAATGAAGATGAAACTTCTGCAGATCTTGTAGAAACG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000261168.9
ENST00000396279.2
ENST00000536444.5
ENST00000537653.5
ENST00000539659.5
ENST00000540793.5
ENST00000541654.1
ENST00000543189.5
ENST00000544627.5
CDS TCA 72 bp ATTATTGCTGTTGACATCATTTACAGTTTTTCCTGGTaGTACTGGTGGGTTGGGTGGATGTTCATGTCTTTT +
Preference number: 6 (lower is better)
Translates to: IIAVDIIYSFSW*YWWVGWMFMSF
Trigger: AAAAGACATGAACATCCACCCAACCCACCAGTATCACCAGGAAAAACTGTAAATGATGTCAACAGCAATAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000261168.9
ENST00000536444.5
ENST00000537653.5
ENST00000539659.5
ENST00000540793.5
ENST00000541654.1
ENST00000543189.5
ENST00000544627.5
CDS GCA 72 bp CTTTCAAATAGTGGTTCACATCTGTTGGGTAGTTTGTaGAGCATACATCCCATTTACCACAAAAGCCAAAAA +
Preference number: 6 (lower is better)
Translates to: LSNSGSHLLGSL*SIHPIYHKSQK
Trigger: TTTTTGGCTTTTGTGGTAAATGGGATGTATGCTGCACAAACTACCCAACAGATGTGAACCACTATTTGAAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542991.1
CDS CAA 72 bp ATTACTTTCTACTTCTGCTGGAGAGCACGTTTCATTTaGCGATATAACTTCAGACTCATCTTTTTCACCCGA +
Preference number: 6 (lower is better)
Translates to: ITFYFCWRARFI*RYNFRLIFFTR
Trigger: TCGGGTGAAAAAGATGAGTCTGAAGTTATATCGCAAAATGAAACGTGCTCTCCAGCAGAAGTAGAAAGTAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000261168.9
ENST00000537653.5
ENST00000540793.5
ENST00000541654.1
ENST00000544627.5
CDS CCA 72 bp ATTGCTACTTGGTTCTATATTGTCAATTTCAGGAACTaGTTCACAAACTGGTACAGACTTTGGTTCAAAGGT +
Preference number: 6 (lower is better)
Translates to: IATWFYIVNFRN*FTNWYRLWFKG
Trigger: ACCTTTGAACCAAAGTCTGTACCAGTTTGTGAACCAGTTCCTGAAATTGACAATATAGAACCAAGTAGCAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000261168.9
ENST00000396279.2
ENST00000536444.5
ENST00000537653.5
ENST00000539659.5
ENST00000540793.5
ENST00000541654.1
ENST00000543189.5
ENST00000544627.5
CDS CAA 72 bp TCTTCTTCCATATATCGACGACGTTTAGACTGTACATaGTCCATGTCTTCTGATTTAGAACGTTTTCGTCTA +
Preference number: 6 (lower is better)
Translates to: SSSIYRRRLDCT*SMSSDLERFRL
Trigger: TAGACGAAAACGTTCTAAATCAGAAGACATGGACAATGTACAGTCTAAACGTCGTCGATATATGGAAGAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000261168.9
ENST00000536444.5
ENST00000537653.5
ENST00000538511.5
ENST00000539659.5
ENST00000540793.5
ENST00000541654.1
ENST00000543189.5
ENST00000544627.5
CDS CAA 72 bp TTCATTACTTTCTACTTCTGGAGAGCACGTTTCATTTaGCGATATAACTTCAGACTCATCTTTTTCACCCGA +
Preference number: 6 (lower is better)
Translates to: FITFYFWRARFI*RYNFRLIFFTR
Trigger: TCGGGTGAAAAAGATGAGTCTGAAGTTATATCGCAAAATGAAACGTGCTCTCCAGAAGTAGAAAGTAATGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000536444.5
ENST00000539659.5
ENST00000543189.5
CDS CAA 90 bp GCCTCATATTCTTCTTCCATATATCGACGACGTTTAGACTGTACATaGTCCATGTCTTCTGATTTAGAACGTTTTCGTCTAGAAAATTCA +
Preference number: 6 (lower is better)
Translates to: ASYSSSIYRRRLDCT*SMSSDLERFRLENS
Trigger: TGAATTTTCTAGACGAAAACGTTCTAAATCAGAAGACATGGACAATGTACAGTCTAAACGTCGTCGATATATGGAAGAAGAATATGAGGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000261168.9
ENST00000536444.5
ENST00000537653.5
ENST00000538511.5
ENST00000539659.5
ENST00000540793.5
ENST00000541654.1
ENST00000543189.5
ENST00000544627.5
CDS TCA 72 bp TCGACGACGTTTAGACTGTACATTGTCCATGTCTTCTaGTTTAGAACGTTTTCGTCTAGAAAATTCATTTTT +
Preference number: 6 (lower is better)
Translates to: STTFRLYIVHVF*FRTFSSRKFIF
Trigger: AAAAATGAATTTTCTAGACGAAAACGTTCTAAATCAGAAGACATGGACAATGTACAGTCTAAACGTCGTCGA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000261168.9
ENST00000536444.5
ENST00000537653.5
ENST00000538511.5
ENST00000539659.5
ENST00000540793.5
ENST00000541654.1
ENST00000543189.5
ENST00000544627.5
CDS CAA 72 bp AAAATGGTATCAAAACGTTGCTTAGTACAATTACTATaGAAGTACCTTGTGAAGCTCCACTCTCTTCATCAT +
Preference number: 6 (lower is better)
Translates to: KMVSKRCLVQLL*KYLVKLHSLHH
Trigger: ATGATGAAGAGAGTGGAGCTTCACAAGGTACTTCAATAGTAATTGTACTAAGCAACGTTTTGATACCATTTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535179.1
ENST00000537653.5