RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ATF7 (Homo sapiens)

Ensembl gene IDs: ENSG00000170653

Ensembl transcript IDs: ENST00000420353.7, ENST00000456903.8, ENST00000546661.1, ENST00000548118.6, ENST00000548446.6, ENST00000551087.1, ENST00000551480.2, ENST00000588078.5, ENST00000588232.5, ENST00000589726.1, ENST00000591397.1

Found 593 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GAGAATAGAGCGAAGCCCCTGCCTCAGCCCAGTCCCAGGAGATTGTaGGAACCAGCTCACAGGGATCATGCTGAATCAGGTGGAGGGGAA +
Preference number: 1 (lower is better)
Translates to: ENRAKPLPQPSPRRL*EPAHRDHAESGGGE
Trigger: TTCCCCTCCACCTGATTCAGCATGATCCCTGTGAGCTGGTTCTCACAATCTCCTGGGACTGGGCTGAGGCAGGGGCTTCGCTCTATTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420353.7
3UTR CCA 90 bp TGCAGCACTGCATCCTCCTACCTGTCAAAGGCCACCACTGGGCACTaGGGAGACCCAGACCGAGTTGAGTTCCTTGATAAGATGGAGAGG +
Preference number: 1 (lower is better)
Translates to: CSTASSYLSKATTGH*GDPDRVEFLDKMER
Trigger: CCTCTCCATCTTATCAAGGAACTCAACTCGGTCTGGGTCTCCCCAGTGCCCAGTGGTGGCCTTTGACAGGTAGGAGGATGCAGTGCTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420353.7
3UTR CCA 90 bp GGTTCTGACCTGCTGCTTCCTTATTTCAGTGCCATTTTGTTACTGTaGTTCTGGCAGTGCTCCTCACTGAGGTCCCGTACACATCTTCCC +
Preference number: 1 (lower is better)
Translates to: GSDLLLPYFSAILLL*FWQCSSLRSRTHLP
Trigger: GGGAAGATGTGTACGGGACCTCAGTGAGGAGCACTGCCAGAACCACAGTAACAAAATGGCACTGAAATAAGGAAGCAGCAGGTCAGAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
3UTR CCA 90 bp TGGCAGCTAGCTAGAGTGCTTGTGTATCGAGCACTCACATTGGAGTaGGGTGGGAAGCCTGAGTCCTGTATTCACATGAACGAATTCAGG +
Preference number: 1 (lower is better)
Translates to: WQLARVLVYRALTLE*GGKPESCIHMNEFR
Trigger: CCTGAATTCGTTCATGTGAATACAGGACTCAGGCTTCCCACCCCACTCCAATGTGAGTGCTCGATACACAAGCACTCTAGCTAGCTGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
3UTR CCA 90 bp TCAATAGATACTATGTTAGGATGTGGCAGCCTCCACTCTTGGGGCTaGAAGCTCATCTCCTCCCTGCCTGAAAGGTGTGTGTGTTGTAGG +
Preference number: 1 (lower is better)
Translates to: SIDTMLGCGSLHSWG*KLISSLPERCVCCR
Trigger: CCTACAACACACACACCTTTCAGGCAGGGAGGAGATGAGCTTCCAGCCCCAAGAGTGGAGGCTGCCACATCCTAACATAGTATCTATTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420353.7
3UTR CCA 90 bp GACCTGCTGCTTCCTTATTTCAGTGCCATTTTGTTACTGTGGTTCTaGCAGTGCTCCTCACTGAGGTCCCGTACACATCTTCCCACTGAT +
Preference number: 1 (lower is better)
Translates to: DLLLPYFSAILLLWF*QCSSLRSRTHLPTD
Trigger: ATCAGTGGGAAGATGTGTACGGGACCTCAGTGAGGAGCACTGCCAGAACCACAGTAACAAAATGGCACTGAAATAAGGAAGCAGCAGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
3UTR CCA 90 bp ATAGATACACACTGCTTCCTTTTCAATAGATACTATGTTAGGATGTaGCAGCCTCCACTCTTGGGGCTGGAAGCTCATCTCCTCCCTGCC +
Preference number: 1 (lower is better)
Translates to: IDTHCFLFNRYYVRM*QPPLLGLEAHLLPA
Trigger: GGCAGGGAGGAGATGAGCTTCCAGCCCCAAGAGTGGAGGCTGCCACATCCTAACATAGTATCTATTGAAAAGGAAGCAGTGTGTATCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420353.7
3UTR TCA 90 bp CAAGGGGAGATGAGAAGCCTTAACGTGGAAGAGGGACAAGAGAGATaGATTGCTCCCTCTGCAACCCAACTCTTCAAAGTAAGAATGGTT +
Preference number: 1 (lower is better)
Translates to: QGEMRSLNVEEGQER*IAPSATQLFKVRMV
Trigger: AACCATTCTTACTTTGAAGAGTTGGGTTGCAGAGGGAGCAATTCATCTCTCTTGTCCCTCTTCCACGTTAAGGCTTCTCATCTCCCCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
3UTR GCA 90 bp CTGCTTCCTTATTTCAGTGCCATTTTGTTACTGTGGTTCTGGCAGTaGTCCTCACTGAGGTCCCGTACACATCTTCCCACTGATAAAAAT +
Preference number: 1 (lower is better)
Translates to: LLPYFSAILLLWFWQ*SSLRSRTHLPTDKN
Trigger: ATTTTTATCAGTGGGAAGATGTGTACGGGACCTCAGTGAGGAGCACTGCCAGAACCACAGTAACAAAATGGCACTGAAATAAGGAAGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
3UTR TCA 90 bp ATTTCAGTGCCATTTTGTTACTGTGGTTCTGGCAGTGCTCCTCACTaGGGTCCCGTACACATCTTCCCACTGATAAAAATGAAGTTAGGA +
Preference number: 1 (lower is better)
Translates to: ISVPFCYCGSGSAPH*GPVHIFPLIKMKLG
Trigger: TCCTAACTTCATTTTTATCAGTGGGAAGATGTGTACGGGACCTCAGTGAGGAGCACTGCCAGAACCACAGTAACAAAATGGCACTGAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
3UTR CCA 90 bp CTTTTAAACCCTGCCCCCAGAGTCTGTGATTCAATAAGTCTGGGATaGGGCCTGAGAATGTGTATTTCTAACAAGTTCCCAGATTACTGT +
Preference number: 1 (lower is better)
Translates to: LLNPAPRVCDSISLG*GLRMCISNKFPDYC
Trigger: ACAGTAATCTGGGAACTTGTTAGAAATACACATTCTCAGGCCCCATCCCAGACTTATTGAATCACAGACTCTGGGGGCAGGGTTTAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420353.7
3UTR TCA 90 bp ACTTGTGCTGATCCATCATCTGGAACTCCTAAAGACCTGAATGGCTaGCTGGGATTAGTGACTACTATCTGGTTTTACTGGTTTTACTCT +
Preference number: 1 (lower is better)
Translates to: TCADPSSGTPKDLNG*LGLVTTIWFYWFYS
Trigger: AGAGTAAAACCAGTAAAACCAGATAGTAGTCACTAATCCCAGTCAGCCATTCAGGTCTTTAGGAGTTCCAGATGATGGATCAGCACAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000548118.6
ENST00000591397.1
3UTR TCA 90 bp ATTAAACTAATACTCCCCTGGAAGAACAAGAGGACTAATTTTCGGTaGCGACAGACTTGTGCTGATCCATCATCTGGAACTCCTAAAGAC +
Preference number: 1 (lower is better)
Translates to: IKLILPWKNKRTNFR*RQTCADPSSGTPKD
Trigger: GTCTTTAGGAGTTCCAGATGATGGATCAGCACAAGTCTGTCGTCACCGAAAATTAGTCCTCTTGTTCTTCCAGGGGAGTATTAGTTTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000548118.6
ENST00000591397.1
3UTR GCA 90 bp AAATTTCCCAGCTTATCCCTAAGAAATGGTTCTCAACCTTTAGTGTaGATTAGAATCACTTGGAGTGCTTTTAAACCCTGCCCCCAGAGT +
Preference number: 1 (lower is better)
Translates to: KFPSLSLRNGSQPLV*IRITWSAFKPCPQS
Trigger: ACTCTGGGGGCAGGGTTTAAAAGCACTCCAAGTGATTCTAATGCACACTAAAGGTTGAGAACCATTTCTTAGGGATAAGCTGGGAAATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420353.7
3UTR-3UTR TCA 90 bp GAGTGCTTGTGTATCGAGCACTCACATTGGAGTGGGGTGGGAAGCCTGAGTCCTGGGAGACCTGAGTCCTaGGTCCATGGGGTGGCTGGG +
Preference number: 2 (lower is better)
Translates to: ECLCIEHSHWSGVGSLSPGRPES*VHGVAG
Trigger: CCCAGCCACCCCATGGACTCAGGACTCAGGTCTCCC...AGGACTCAGGCTTCCCACCCCACTCCAATGTGAGTGCTCGATACACAAGCACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
3UTR-3UTR TCA 90 bp AGGATGACCAGGCCTGGTCCTCTGTGCCTGGGGCTGGCAGTCAGGGCAACACAGTGGGAGGGGATAAGATaGCATCTCTCTTGGCTCTTG +
Preference number: 2 (lower is better)
Translates to: RMTRPGPLCLGLAVRATQWEGIR*HLSWLL
Trigger: CAAGAGCCAAGAGAGATGTCATCTTATCCCCTCCCA...CTGTGTTGCCCTGACTGCCAGCCCCAGGCACAGAGGACCAGGCCTGGTCATCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548446.6
3UTR-3UTR CCA 90 bp GGAAAGGAAGACAGTATGGTTAGGGAGAATAGAGCGAAGCCCCTGCCTCAGCCCGCCACCACTGGGCACTaGGGAGACCCAGACCGAGTT +
Preference number: 2 (lower is better)
Translates to: GKEDSMVRENRAKPLPQPATTGH*GDPDRV
Trigger: AACTCGGTCTGGGTCTCCCCAGTGCCCAGTGGTGGC...GGGCTGAGGCAGGGGCTTCGCTCTATTCTCCCTAACCATACTGTCTTCCTTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420353.7
3UTR CAA 90 bp GTGAGCAGACCAGAAGACCTGGTTCTGTCCCCTCCCTCTGTGGCCTaGGGTACGTGGCAGCTAGCTAGAGTGCTTGTGTATCGAGCACTC +
Preference number: 2 (lower is better)
Translates to: VSRPEDLVLSPPSVA*GTWQLARVLVYRAL
Trigger: GAGTGCTCGATACACAAGCACTCTAGCTAGCTGCCACGTACCCAAGGCCACAGAGGGAGGGGACAGAACCAGGTCTTCTGGTCTGCTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
3UTR-3UTR TCA 90 bp GGGGTAGAACAAAGGAACTCGAGAGTCCCCTACATGACAGCCTCCAGGAGGGCTCAGCTATGGGAGACCTaGGTCCTGAGTCCATGGGGT +
Preference number: 2 (lower is better)
Translates to: GVEQRNSRVPYMTASRRAQLWET*VLSPWG
Trigger: ACCCCATGGACTCAGGACTCAGGTCTCCCATAGCTG...AGCCCTCCTGGAGGCTGTCATGTAGGGGACTCTCGAGTTCCTTTGTTCTACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
3UTR-3UTR CCA 90 bp GACACCCACCATACACTCAGCTCCTTTCTGAAAGTGTCCTCCCTTAGGCCTCTATGGGCGGGCGAGCTCTaGCTGAGGACCTCTCCACCA +
Preference number: 2 (lower is better)
Translates to: DTHHTLSSFLKVSSLRPLWAGEL*LRTSPP
Trigger: TGGTGGAGAGGTCCTCAGCCAGAGCTCGCCCGCCCA...TAGAGGCCTAAGGGAGGACACTTTCAGAAAGGAGCTGAGTGTATGGTGGGTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
3UTR-3UTR CCA 90 bp CCACCCATATTGCCATGTCCAAGGCAGATGGGAGGGGATAAGATGACATCTCTCTGGGCGGGCGAGCTCTaGCTGAGGACCTCTCCACCA +
Preference number: 2 (lower is better)
Translates to: PPILPCPRQMGGDKMTSLWAGEL*LRTSPP
Trigger: TGGTGGAGAGGTCCTCAGCCAGAGCTCGCCCGCCCA...GAGAGATGTCATCTTATCCCCTCCCATCTGCCTTGGACATGGCAATATGGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420353.7
ENST00000456903.8
ENST00000548446.6
3UTR-3UTR CCA 90 bp CCCACCACTACACTAAAGTCAAGGGACAAAATGAGGTACCCAAATAGCTCTGCAATGAGGCTCCGGGGCTaGGAGGCCCCCAGCACAGGT +
Preference number: 2 (lower is better)
Translates to: PTTTLKSRDKMRYPNSSAMRLRG*EAPSTG
Trigger: ACCTGTGCTGGGGGCCTCCCAGCCCCGGAGCCTCAT...TGCAGAGCTATTTGGGTACCTCATTTTGTCCCTTGACTTTAGTGTAGTGGTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
3UTR-3UTR TCA 90 bp GCTCTGGGACAACTGGAAGGGTTTCATACGGAAAGGCAATTAAAGCTGACCTATGGGAGACCTGAGTCCTaGGTCCATGGGGTGGCTGGG +
Preference number: 2 (lower is better)
Translates to: ALGQLEGFHTERQLKLTYGRPES*VHGVAG
Trigger: CCCAGCCACCCCATGGACTCAGGACTCAGGTCTCCC...ATAGGTCAGCTTTAATTGCCTTTCCGTATGAAACCCTTCCAGTTGTCCCAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
3UTR-3UTR TCA 90 bp GACACCCACCATACACTCAGCTCCTTTCTGAAAGTGTCCTCCCTTAGGCCTCTAGGCAGTGCTCCTCACTaGGGTCCCGTACACATCTTC +
Preference number: 2 (lower is better)
Translates to: DTHHTLSSFLKVSSLRPLGSAPH*GPVHIF
Trigger: GAAGATGTGTACGGGACCTCAGTGAGGAGCACTGCC...TAGAGGCCTAAGGGAGGACACTTTCAGAAAGGAGCTGAGTGTATGGTGGGTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
3UTR-3UTR TCA 90 bp GAGTGCTTGTGTATCGAGCACTCACATTGGAGTGGGGTGGGAAGCCTGAGTCCTCACTCAGCTCCTTTCTaGAAGTGTCCTCCCTTAGGC +
Preference number: 2 (lower is better)
Translates to: ECLCIEHSHWSGVGSLSPHSAPF*KCPPLG
Trigger: GCCTAAGGGAGGACACTTTCAGAAAGGAGCTGAGTG...AGGACTCAGGCTTCCCACCCCACTCCAATGTGAGTGCTCGATACACAAGCACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
3UTR-3UTR GCA 90 bp GAGTGCTTGTGTATCGAGCACTCACATTGGAGTGGGGTGGGAAGCCTGAGTCCTTGCTGGGACCAGTTCTaGACTTTCCCTCTCCTCTTC +
Preference number: 2 (lower is better)
Translates to: ECLCIEHSHWSGVGSLSPCWDQF*TFPLLF
Trigger: GAAGAGGAGAGGGAAAGTGCAGAACTGGTCCCAGCA...AGGACTCAGGCTTCCCACCCCACTCCAATGTGAGTGCTCGATACACAAGCACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
3UTR-3UTR GCA 90 bp GAGTGCTTGTGTATCGAGCACTCACATTGGAGTGGGGTGGGAAGCCTGAGTCCTCTGGATGTGGTAACCTaGGTCCTGACCATCTGCCAT +
Preference number: 2 (lower is better)
Translates to: ECLCIEHSHWSGVGSLSPLDVVT*VLTICH
Trigger: ATGGCAGATGGTCAGGACGCAGGTTACCACATCCAG...AGGACTCAGGCTTCCCACCCCACTCCAATGTGAGTGCTCGATACACAAGCACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
3UTR-3UTR CCA 90 bp CCCACCACTACACTAAAGTCAAGGGACAAAATGAGGTACCCAAATAGCTCTGCATGGGCGGGCGAGCTCTaGCTGAGGACCTCTCCACCA +
Preference number: 2 (lower is better)
Translates to: PTTTLKSRDKMRYPNSSAWAGEL*LRTSPP
Trigger: TGGTGGAGAGGTCCTCAGCCAGAGCTCGCCCGCCCA...TGCAGAGCTATTTGGGTACCTCATTTTGTCCCTTGACTTTAGTGTAGTGGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
3UTR-3UTR CCA 90 bp GGGGTAGAACAAAGGAACTCGAGAGTCCCCTACATGACAGCCTCCAGGAGGGCTATTGTTCGGACCATCTaGAAAGGCCTTTGGCTGTGG +
Preference number: 2 (lower is better)
Translates to: GVEQRNSRVPYMTASRRAIVRTI*KGLWLW
Trigger: CCACAGCCAAAGGCCTTTCCAGATGGTCCGAACAAT...AGCCCTCCTGGAGGCTGTCATGTAGGGGACTCTCGAGTTCCTTTGTTCTACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
3UTR-3UTR CCA 90 bp GAGTGCTTGTGTATCGAGCACTCACATTGGAGTGGGGTGGGAAGCCTGAGTCCTACAGATACACGTGCATaGGGCAGGGGTGATTGTTCG +
Preference number: 2 (lower is better)
Translates to: ECLCIEHSHWSGVGSLSPTDTRA*GRGDCS
Trigger: CGAACAATCACCCCTGCCCCATGCACGTGTATCTGT...AGGACTCAGGCTTCCCACCCCACTCCAATGTGAGTGCTCGATACACAAGCACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
3UTR-3UTR CCA 90 bp GACACCCACCATACACTCAGCTCCTTTCTGAAAGTGTCCTCCCTTAGGCCTCTACAAGGCTTAGTGGGGTaGTGGGAAAGACCCCACCAC +
Preference number: 2 (lower is better)
Translates to: DTHHTLSSFLKVSSLRPLQGLVG*WERPHH
Trigger: GTGGTGGGGTCTTTCCCACCACCCCACTAAGCCTTG...TAGAGGCCTAAGGGAGGACACTTTCAGAAAGGAGCTGAGTGTATGGTGGGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
3UTR-3UTR CCA 90 bp CCAGTCCCAGGAGATTGTGAGAACCAGCTCACAGGGATCATGCTGAATCAGGTGCCTGGGGTCCTTTGCTaGGACCAGTTCTGCACTTTC +
Preference number: 2 (lower is better)
Translates to: PVPGDCENQLTGIMLNQVPGVLC*DQFCTF
Trigger: GAAAGTGCAGAACTGGTCCCAGCAAAGGACCCCAGG...CACCTGATTCAGCATGATCCCTGTGAGCTGGTTCTCACAATCTCCTGGGACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420353.7
3UTR-3UTR GCA 90 bp GAGTGCTTGTGTATCGAGCACTCACATTGGAGTGGGGTGGGAAGCCTGAGTCCTGGTCCTGGTAGAAACTaGATAGTTCAGAGCCAAGGG +
Preference number: 2 (lower is better)
Translates to: ECLCIEHSHWSGVGSLSPGPGRN*IVQSQG
Trigger: CCCTTGGCTCTGAACTATGCAGTTTCTACCAGGACC...AGGACTCAGGCTTCCCACCCCACTCCAATGTGAGTGCTCGATACACAAGCACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
3UTR-3UTR CCA 90 bp GAGTGCTTGTGTATCGAGCACTCACATTGGAGTGGGGTGGGAAGCCTGAGTCCTCAGCCAGTCAGATTCTaGGCCCTTCCCTTTTCACTA +
Preference number: 2 (lower is better)
Translates to: ECLCIEHSHWSGVGSLSPQPVRF*ALPFSL
Trigger: TAGTGAAAAGGGAAGGGCCCAGAATCTGACTGGCTG...AGGACTCAGGCTTCCCACCCCACTCCAATGTGAGTGCTCGATACACAAGCACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
3UTR-3UTR CCA 90 bp GAGTGCTTGTGTATCGAGCACTCACATTGGAGTGGGGTGGGAAGCCTGAGTCCTACAGATGGCAGAAAGTaGCTCTGGGACAACTGGAAG +
Preference number: 2 (lower is better)
Translates to: ECLCIEHSHWSGVGSLSPTDGRK*LWDNWK
Trigger: CTTCCAGTTGTCCCAGAGCCACTTTCTGCCATCTGT...AGGACTCAGGCTTCCCACCCCACTCCAATGTGAGTGCTCGATACACAAGCACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
3UTR-3UTR CCA 90 bp GAGTGCTTGTGTATCGAGCACTCACATTGGAGTGGGGTGGGAAGCCTGAGTCCTAGGGCCTATTCCTGTTaGGTACCTGATGGTAGAGGA +
Preference number: 2 (lower is better)
Translates to: ECLCIEHSHWSGVGSLSPRAYSC*VPDGRG
Trigger: TCCTCTACCATCAGGTACCCAACAGGAATAGGCCCT...AGGACTCAGGCTTCCCACCCCACTCCAATGTGAGTGCTCGATACACAAGCACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
3UTR-3UTR CCA 90 bp GGAAAGGAAGACAGTATGGTTAGGGAGAATAGAGCGAAGCCCCTGCCTCAGCCCCCTCTAGAAACGCCATaGACTTTAGGAAGGGCCAAG +
Preference number: 2 (lower is better)
Translates to: GKEDSMVRENRAKPLPQPPLETP*TLGRAK
Trigger: CTTGGCCCTTCCTAAAGTCCATGGCGTTTCTAGAGG...GGGCTGAGGCAGGGGCTTCGCTCTATTCTCCCTAACCATACTGTCTTCCTTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420353.7
3UTR-3UTR CCA 90 bp GGAAAGGAAGACAGTATGGTTAGGGAGAATAGAGCGAAGCCCCTGCCTCAGCCCGGGACAGCTGAAGCTTaGCTGGTCCTTACTGTAACA +
Preference number: 2 (lower is better)
Translates to: GKEDSMVRENRAKPLPQPGTAEA*LVLTVT
Trigger: TGTTACAGTAAGGACCAGCCAAGCTTCAGCTGTCCC...GGGCTGAGGCAGGGGCTTCGCTCTATTCTCCCTAACCATACTGTCTTCCTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420353.7
3UTR-3UTR TCA 90 bp GGGGTAGAACAAAGGAACTCGAGAGTCCCCTACATGACAGCCTCCAGGAGGGCTAGTCAAGGGACAAAATaGGGTACCCAAATAGCTCTG +
Preference number: 2 (lower is better)
Translates to: GVEQRNSRVPYMTASRRASQGTK*GTQIAL
Trigger: CAGAGCTATTTGGGTACCTCATTTTGTCCCTTGACT...AGCCCTCCTGGAGGCTGTCATGTAGGGGACTCTCGAGTTCCTTTGTTCTACCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
3UTR-3UTR TCA 90 bp CCAGTCCCAGGAGATTGTGAGAACCAGCTCACAGGGATCATGCTGAATCAGGTGTCAGCATCTTGGCTATaGCGCTTCAAGATCCTGGAG +
Preference number: 2 (lower is better)
Translates to: PVPGDCENQLTGIMLNQVSASWL*RFKILE
Trigger: CTCCAGGATCTTGAAGCGTCATAGCCAAGATGCTGA...CACCTGATTCAGCATGATCCCTGTGAGCTGGTTCTCACAATCTCCTGGGACTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420353.7
3UTR-3UTR GCA 90 bp CCAGTCCCAGGAGATTGTGAGAACCAGCTCACAGGGATCATGCTGAATCAGGTGGGTCCTGGTAGAAACTaGATAGTTCAGAGCCAAGGG +
Preference number: 2 (lower is better)
Translates to: PVPGDCENQLTGIMLNQVGPGRN*IVQSQG
Trigger: CCCTTGGCTCTGAACTATGCAGTTTCTACCAGGACC...CACCTGATTCAGCATGATCCCTGTGAGCTGGTTCTCACAATCTCCTGGGACTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420353.7
3UTR-3UTR GCA 90 bp GGAAAGGAAGACAGTATGGTTAGGGAGAATAGAGCGAAGCCCCTGCCTCAGCCCGCTTTAGGGCAAGGCTaGTACTGGGAAATCAAGACA +
Preference number: 2 (lower is better)
Translates to: GKEDSMVRENRAKPLPQPALGQG*YWEIKT
Trigger: TGTCTTGATTTCCCAGTAGCAGCCTTGCCCTAAAGC...GGGCTGAGGCAGGGGCTTCGCTCTATTCTCCCTAACCATACTGTCTTCCTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420353.7
3UTR-3UTR GCA 90 bp GAGTGCTTGTGTATCGAGCACTCACATTGGAGTGGGGTGGGAAGCCTGAGTCCTGCTTTAGGGCAAGGCTaGTACTGGGAAATCAAGACA +
Preference number: 2 (lower is better)
Translates to: ECLCIEHSHWSGVGSLSPALGQG*YWEIKT
Trigger: TGTCTTGATTTCCCAGTAGCAGCCTTGCCCTAAAGC...AGGACTCAGGCTTCCCACCCCACTCCAATGTGAGTGCTCGATACACAAGCACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
3UTR-3UTR CCA 90 bp GACACCCACCATACACTCAGCTCCTTTCTGAAAGTGTCCTCCCTTAGGCCTCTAGGCAGAAAGTGGCTCTaGGACAACTGGAAGGGTTTC +
Preference number: 2 (lower is better)
Translates to: DTHHTLSSFLKVSSLRPLGRKWL*DNWKGF
Trigger: GAAACCCTTCCAGTTGTCCCAGAGCCACTTTCTGCC...TAGAGGCCTAAGGGAGGACACTTTCAGAAAGGAGCTGAGTGTATGGTGGGTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
3UTR CAA 90 bp ACCTGTCAAAGGCCACCACTGGGCACTGGGGAGACCCAGACCGAGTaGAGTTCCTTGATAAGATGGAGAGGTGTTGCTACATGTCAAAAA +
Preference number: 2 (lower is better)
Translates to: TCQRPPLGTGETQTE*SSLIRWRGVATCQK
Trigger: TTTTTGACATGTAGCAACACCTCTCCATCTTATCAAGGAACTCAACTCGGTCTGGGTCTCCCCAGTGCCCAGTGGTGGCCTTTGACAGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420353.7
3UTR-3UTR TCA 90 bp CCCACCACTACACTAAAGTCAAGGGACAAAATGAGGTACCCAAATAGCTCTGCATGCATGGGGCAGGGGTaGTTGTTCGGACCATCTGGA +
Preference number: 2 (lower is better)
Translates to: PTTTLKSRDKMRYPNSSACMGQG*LFGPSG
Trigger: TCCAGATGGTCCGAACAATCACCCCTGCCCCATGCA...TGCAGAGCTATTTGGGTACCTCATTTTGTCCCTTGACTTTAGTGTAGTGGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
3UTR-3UTR TCA 90 bp GAGTGCTTGTGTATCGAGCACTCACATTGGAGTGGGGTGGGAAGCCTGAGTCCTAATAAGGCCACAAAATaGGGTTGCCAAGGCTTAGTG +
Preference number: 2 (lower is better)
Translates to: ECLCIEHSHWSGVGSLSPNKATK*GCQGLV
Trigger: CACTAAGCCTTGGCAACCTCATTTTGTGGCCTTATT...AGGACTCAGGCTTCCCACCCCACTCCAATGTGAGTGCTCGATACACAAGCACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
3UTR-3UTR TCA 90 bp GGGGTAGAACAAAGGAACTCGAGAGTCCCCTACATGACAGCCTCCAGGAGGGCTGCAGGAGCAGAAAAATaGCCAAAGATGACAATATGC +
Preference number: 2 (lower is better)
Translates to: GVEQRNSRVPYMTASRRAAGAEK*PKMTIC
Trigger: GCATATTGTCATCTTTGGTCATTTTTCTGCTCCTGC...AGCCCTCCTGGAGGCTGTCATGTAGGGGACTCTCGAGTTCCTTTGTTCTACCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
3UTR-3UTR CCA 90 bp GAGTGCTTGTGTATCGAGCACTCACATTGGAGTGGGGTGGGAAGCCTGAGTCCTATCTGGAAAGGCCTTTaGCTGTGGATGCATCAGAAA +
Preference number: 2 (lower is better)
Translates to: ECLCIEHSHWSGVGSLSPIWKGL*LWMHQK
Trigger: TTTCTGATGCATCCACAGCCAAAGGCCTTTCCAGAT...AGGACTCAGGCTTCCCACCCCACTCCAATGTGAGTGCTCGATACACAAGCACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
3UTR-3UTR CCA 90 bp AGTGACACCTTCCATGATGTTTGGTTCTGGTCCAGATGGATCTGGAAGACAAAGCAAGGCTTAGTGGGGTaGTGGGAAAGACCCCACCAC +
Preference number: 2 (lower is better)
Translates to: SDTFHDVWFWSRWIWKTKQGLVG*WERPHH
Trigger: GTGGTGGGGTCTTTCCCACCACCCCACTAAGCCTTG...CTTTGTCTTCCAGATCCATCTGGACCAGAACCAAACATCATGGAAGGTGTCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
3UTR-3UTR CCA 90 bp GACACCCACCATACACTCAGCTCCTTTCTGAAAGTGTCCTCCCTTAGGCCTCTAAACACAGGGACAGACTaGCAGGGCATGTATGCAGTT +
Preference number: 2 (lower is better)
Translates to: DTHHTLSSFLKVSSLRPLNTGTD*QGMYAV
Trigger: AACTGCATACATGCCCTGCCAGTCTGTCCCTGTGTT...TAGAGGCCTAAGGGAGGACACTTTCAGAAAGGAGCTGAGTGTATGGTGGGTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
3UTR-3UTR CCA 90 bp CCAGTCCCAGGAGATTGTGAGAACCAGCTCACAGGGATCATGCTGAATCAGGTGTTGGTGTCTGTTTGGTaGTTCAGGCTGTACATAGGG +
Preference number: 2 (lower is better)
Translates to: PVPGDCENQLTGIMLNQVLVSVW*FRLYIG
Trigger: CCCTATGTACAGCCTGAACCACCAAACAGACACCAA...CACCTGATTCAGCATGATCCCTGTGAGCTGGTTCTCACAATCTCCTGGGACTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420353.7
3UTR-3UTR CCA 90 bp CCAGTCCCAGGAGATTGTGAGAACCAGCTCACAGGGATCATGCTGAATCAGGTGGTTCCCAGATTACTGTaGCACTGCCCTAAGGTAAAG +
Preference number: 2 (lower is better)
Translates to: PVPGDCENQLTGIMLNQVVPRLL*HCPKVK
Trigger: CTTTACCTTAGGGCAGTGCCACAGTAATCTGGGAAC...CACCTGATTCAGCATGATCCCTGTGAGCTGGTTCTCACAATCTCCTGGGACTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420353.7
3UTR CAA 90 bp TATCTAGGGGGTTCTGACCTGCTGCTTCCTTATTTCAGTGCCATTTaGTTACTGTGGTTCTGGCAGTGCTCCTCACTGAGGTCCCGTACA +
Preference number: 2 (lower is better)
Translates to: YLGGSDLLLPYFSAI*LLWFWQCSSLRSRT
Trigger: TGTACGGGACCTCAGTGAGGAGCACTGCCAGAACCACAGTAACAAAATGGCACTGAAATAAGGAAGCAGCAGGTCAGAACCCCCTAGATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
3UTR-3UTR TCA 90 bp CCAGTCCCAGGAGATTGTGAGAACCAGCTCACAGGGATCATGCTGAATCAGGTGAGTCAAGGGACAAAATaGGGTACCCAAATAGCTCTG +
Preference number: 2 (lower is better)
Translates to: PVPGDCENQLTGIMLNQVSQGTK*GTQIAL
Trigger: CAGAGCTATTTGGGTACCTCATTTTGTCCCTTGACT...CACCTGATTCAGCATGATCCCTGTGAGCTGGTTCTCACAATCTCCTGGGACTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420353.7
3UTR-3UTR TCA 90 bp TTTGTTGGCCTCTCTAGTATTGTGGGAGGCTTTCTTAGACTTTTCAACTCTAAGCGAGAGTCCCCTACATaGCAGCCTCCAGGAGGGCTG +
Preference number: 2 (lower is better)
Translates to: FVGLSSIVGGFLRLFNSKRESPT*QPPGGL
Trigger: CAGCCCTCCTGGAGGCTGTCATGTAGGGGACTCTCG...CTTAGAGTTGAAAAGTCTAAGAAAGCCTCCCACAATACTAGAGAGGCCAACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
3UTR-3UTR TCA 90 bp GAGTGCTTGTGTATCGAGCACTCACATTGGAGTGGGGTGGGAAGCCTGAGTCCTTTTCTCATTCCCCTGTaGCAGTCAATTTTGGAGACA +
Preference number: 2 (lower is better)
Translates to: ECLCIEHSHWSGVGSLSPFLIPL*QSILET
Trigger: TGTCTCCAAAATTGACTGTCACAGGGGAATGAGAAA...AGGACTCAGGCTTCCCACCCCACTCCAATGTGAGTGCTCGATACACAAGCACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
3UTR-3UTR GCA 90 bp CCCACCACTACACTAAAGTCAAGGGACAAAATGAGGTACCCAAATAGCTCTGCAGCCTTTGGCTGTGGATaGATCAGAAACCCCACCCTG +
Preference number: 2 (lower is better)
Translates to: PTTTLKSRDKMRYPNSSAAFGCG*IRNPTL
Trigger: CAGGGTGGGGTTTCTGATGCATCCACAGCCAAAGGC...TGCAGAGCTATTTGGGTACCTCATTTTGTCCCTTGACTTTAGTGTAGTGGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
3UTR-3UTR CCA 90 bp CCAGTCCCAGGAGATTGTGAGAACCAGCTCACAGGGATCATGCTGAATCAGGTGATCTGGAAAGGCCTTTaGCTGTGGATGCATCAGAAA +
Preference number: 2 (lower is better)
Translates to: PVPGDCENQLTGIMLNQVIWKGL*LWMHQK
Trigger: TTTCTGATGCATCCACAGCCAAAGGCCTTTCCAGAT...CACCTGATTCAGCATGATCCCTGTGAGCTGGTTCTCACAATCTCCTGGGACTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420353.7
3UTR-3UTR CCA 90 bp GACACCCACCATACACTCAGCTCCTTTCTGAAAGTGTCCTCCCTTAGGCCTCTATGGCTCTGGGACAACTaGAAGGGTTTCATACGGAAA +
Preference number: 2 (lower is better)
Translates to: DTHHTLSSFLKVSSLRPLWLWDN*KGFIRK
Trigger: TTTCCGTATGAAACCCTTCCAGTTGTCCCAGAGCCA...TAGAGGCCTAAGGGAGGACACTTTCAGAAAGGAGCTGAGTGTATGGTGGGTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
3UTR-3UTR TCA 90 bp AGTGACACCTTCCATGATGTTTGGTTCTGGTCCAGATGGATCTGGAAGACAAAGGAGGGACAAGAGAGATaGATTGCTCCCTCTGCAACC +
Preference number: 2 (lower is better)
Translates to: SDTFHDVWFWSRWIWKTKEGQER*IAPSAT
Trigger: GGTTGCAGAGGGAGCAATTCATCTCTCTTGTCCCTC...CTTTGTCTTCCAGATCCATCTGGACCAGAACCAAACATCATGGAAGGTGTCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
3UTR-3UTR CCA 90 bp CCCACCACTACACTAAAGTCAAGGGACAAAATGAGGTACCCAAATAGCTCTGCAACAGATACACGTGCATaGGGCAGGGGTGATTGTTCG +
Preference number: 2 (lower is better)
Translates to: PTTTLKSRDKMRYPNSSATDTRA*GRGDCS
Trigger: CGAACAATCACCCCTGCCCCATGCACGTGTATCTGT...TGCAGAGCTATTTGGGTACCTCATTTTGTCCCTTGACTTTAGTGTAGTGGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
3UTR-3UTR CCA 90 bp AGTGACACCTTCCATGATGTTTGGTTCTGGTCCAGATGGATCTGGAAGACAAAGGGCAGAAAGTGGCTCTaGGACAACTGGAAGGGTTTC +
Preference number: 2 (lower is better)
Translates to: SDTFHDVWFWSRWIWKTKGRKWL*DNWKGF
Trigger: GAAACCCTTCCAGTTGTCCCAGAGCCACTTTCTGCC...CTTTGTCTTCCAGATCCATCTGGACCAGAACCAAACATCATGGAAGGTGTCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
3UTR-3UTR CCA 90 bp GACACCCACCATACACTCAGCTCCTTTCTGAAAGTGTCCTCCCTTAGGCCTCTAAGAGAAGGACATTCTTaGCTTGCACAGATGGCAGAA +
Preference number: 2 (lower is better)
Translates to: DTHHTLSSFLKVSSLRPLREGHS*LAQMAE
Trigger: TTCTGCCATCTGTGCAAGCCAAGAATGTCCTTCTCT...TAGAGGCCTAAGGGAGGACACTTTCAGAAAGGAGCTGAGTGTATGGTGGGTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
3UTR-3UTR CCA 90 bp CCAGTCCCAGGAGATTGTGAGAACCAGCTCACAGGGATCATGCTGAATCAGGTGAACCTGTTACCTGACTaGTTCACTAGGACAGGATAT +
Preference number: 2 (lower is better)
Translates to: PVPGDCENQLTGIMLNQVNLLPD*FTRTGY
Trigger: ATATCCTGTCCTAGTGAACCAGTCAGGTAACAGGTT...CACCTGATTCAGCATGATCCCTGTGAGCTGGTTCTCACAATCTCCTGGGACTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420353.7
3UTR-3UTR CCA 90 bp CCAGTCCCAGGAGATTGTGAGAACCAGCTCACAGGGATCATGCTGAATCAGGTGTGGTTCTGGTCCAGATaGATCTGGAAGACAAAGATT +
Preference number: 2 (lower is better)
Translates to: PVPGDCENQLTGIMLNQVWFWSR*IWKTKI
Trigger: AATCTTTGTCTTCCAGATCCATCTGGACCAGAACCA...CACCTGATTCAGCATGATCCCTGTGAGCTGGTTCTCACAATCTCCTGGGACTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420353.7
3UTR-3UTR CCA 90 bp CCAGTCCCAGGAGATTGTGAGAACCAGCTCACAGGGATCATGCTGAATCAGGTGGCCTCTCTAGTATTGTaGGAGGCTTTCTTAGACTTT +
Preference number: 2 (lower is better)
Translates to: PVPGDCENQLTGIMLNQVASLVL*EAFLDF
Trigger: AAAGTCTAAGAAAGCCTCCCACAATACTAGAGAGGC...CACCTGATTCAGCATGATCCCTGTGAGCTGGTTCTCACAATCTCCTGGGACTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420353.7
3UTR CAA 90 bp AGGCCACCACTGGGCACTGGGGAGACCCAGACCGAGTTGAGTTCCTaGATAAGATGGAGAGGTGTTGCTACATGTCAAAAATATATAGAT +
Preference number: 2 (lower is better)
Translates to: RPPLGTGETQTELSS*IRWRGVATCQKYID
Trigger: ATCTATATATTTTTGACATGTAGCAACACCTCTCCATCTTATCAAGGAACTCAACTCGGTCTGGGTCTCCCCAGTGCCCAGTGGTGGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420353.7
3UTR-3UTR TCA 90 bp CCCACCACTACACTAAAGTCAAGGGACAAAATGAGGTACCCAAATAGCTCTGCAGGGAAGAGAGGGAACTaGGAAACCCCAAACCTAGAA +
Preference number: 2 (lower is better)
Translates to: PTTTLKSRDKMRYPNSSAGKRGN*ETPNLE
Trigger: TTCTAGGTTTGGGGTTTCTCAGTTCCCTCTCTTCCC...TGCAGAGCTATTTGGGTACCTCATTTTGTCCCTTGACTTTAGTGTAGTGGTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
3UTR-3UTR TCA 90 bp AGTGACACCTTCCATGATGTTTGGTTCTGGTCCAGATGGATCTGGAAGACAAAGTCAGCATCTTGGCTATaGCGCTTCAAGATCCTGGAG +
Preference number: 2 (lower is better)
Translates to: SDTFHDVWFWSRWIWKTKSASWL*RFKILE
Trigger: CTCCAGGATCTTGAAGCGTCATAGCCAAGATGCTGA...CTTTGTCTTCCAGATCCATCTGGACCAGAACCAAACATCATGGAAGGTGTCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
3UTR-3UTR TCA 90 bp CCAGTCCCAGGAGATTGTGAGAACCAGCTCACAGGGATCATGCTGAATCAGGTGGGCAAAAGATGTATTTaGAATATCCTCCACACCTGT +
Preference number: 2 (lower is better)
Translates to: PVPGDCENQLTGIMLNQVGKRCI*NILHTC
Trigger: ACAGGTGTGGAGGATATTTCAAATACATCTTTTGCC...CACCTGATTCAGCATGATCCCTGTGAGCTGGTTCTCACAATCTCCTGGGACTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420353.7
3UTR-3UTR GCA 90 bp GGAAAGGAAGACAGTATGGTTAGGGAGAATAGAGCGAAGCCCCTGCCTCAGCCCGCTTCCTTATTTCAGTaGCATTTTGTTACTGTGGTT +
Preference number: 2 (lower is better)
Translates to: GKEDSMVRENRAKPLPQPASLFQ*HFVTVV
Trigger: AACCACAGTAACAAAATGGCACTGAAATAAGGAAGC...GGGCTGAGGCAGGGGCTTCGCTCTATTCTCCCTAACCATACTGTCTTCCTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420353.7
3UTR-3UTR CCA 90 bp AGTGACACCTTCCATGATGTTTGGTTCTGGTCCAGATGGATCTGGAAGACAAAGAAAGGCCTTTGGCTGTaGATGCATCAGAAACCCCAC +
Preference number: 2 (lower is better)
Translates to: SDTFHDVWFWSRWIWKTKKGLWL*MHQKPH
Trigger: GTGGGGTTTCTGATGCATCCACAGCCAAAGGCCTTT...CTTTGTCTTCCAGATCCATCTGGACCAGAACCAAACATCATGGAAGGTGTCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
3UTR-3UTR CCA 90 bp CCCACCACTACACTAAAGTCAAGGGACAAAATGAGGTACCCAAATAGCTCTGCAATTGTTCGGACCATCTaGAAAGGCCTTTGGCTGTGG +
Preference number: 2 (lower is better)
Translates to: PTTTLKSRDKMRYPNSSAIVRTI*KGLWLW
Trigger: CCACAGCCAAAGGCCTTTCCAGATGGTCCGAACAAT...TGCAGAGCTATTTGGGTACCTCATTTTGTCCCTTGACTTTAGTGTAGTGGTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
3UTR-3UTR CCA 90 bp GGGGTAGAACAAAGGAACTCGAGAGTCCCCTACATGACAGCCTCCAGGAGGGCTGATGACAATATGCTTTaGCCGGTAAACTCTTATAAA +
Preference number: 2 (lower is better)
Translates to: GVEQRNSRVPYMTASRRADDNML*PVNSYK
Trigger: TTTATAAGAGTTTACCGGCCAAAGCATATTGTCATC...AGCCCTCCTGGAGGCTGTCATGTAGGGGACTCTCGAGTTCCTTTGTTCTACCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
3UTR-3UTR CCA 90 bp AGTGACACCTTCCATGATGTTTGGTTCTGGTCCAGATGGATCTGGAAGACAAAGACAGATGGCAGAAAGTaGCTCTGGGACAACTGGAAG +
Preference number: 2 (lower is better)
Translates to: SDTFHDVWFWSRWIWKTKTDGRK*LWDNWK
Trigger: CTTCCAGTTGTCCCAGAGCCACTTTCTGCCATCTGT...CTTTGTCTTCCAGATCCATCTGGACCAGAACCAAACATCATGGAAGGTGTCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
3UTR-3UTR CCA 90 bp GACACCCACCATACACTCAGCTCCTTTCTGAAAGTGTCCTCCCTTAGGCCTCTATGGTTCTGGTCCAGATaGATCTGGAAGACAAAGATT +
Preference number: 2 (lower is better)
Translates to: DTHHTLSSFLKVSSLRPLWFWSR*IWKTKI
Trigger: AATCTTTGTCTTCCAGATCCATCTGGACCAGAACCA...TAGAGGCCTAAGGGAGGACACTTTCAGAAAGGAGCTGAGTGTATGGTGGGTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
3UTR-3UTR CCA 90 bp AGCAATAACAAGGTAAGTGAAGTTACCTTTGACTATCAGAGAAGTTTCAGGGCAGGCTTAGTGGGGTGGTaGGAAAGACCCCACCACTAC +
Preference number: 2 (lower is better)
Translates to: SNNKVSEVTFDYQRSFRAGLVGW*ERPHHY
Trigger: GTAGTGGTGGGGTCTTTCCCACCACCCCACTAAGCC...TGCCCTGAAACTTCTCTGATAGTCAAAGGTAACTTCACTTACCTTGTTATTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
3UTR-3UTR CCA 90 bp GCTCTGGGACAACTGGAAGGGTTTCATACGGAAAGGCAATTAAAGCTGACCTATGACGCTTCAAGATCCTaGAGCACTGCATGTAAAGAG +
Preference number: 2 (lower is better)
Translates to: ALGQLEGFHTERQLKLTYDASRS*STACKE
Trigger: CTCTTTACATGCAGTGCTCCAGGATCTTGAAGCGTC...ATAGGTCAGCTTTAATTGCCTTTCCGTATGAAACCCTTCCAGTTGTCCCAGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
3UTR-3UTR TCA 90 bp TTTGTTGGCCTCTCTAGTATTGTGGGAGGCTTTCTTAGACTTTTCAACTCTAAGGAGGGACAAGAGAGATaGATTGCTCCCTCTGCAACC +
Preference number: 2 (lower is better)
Translates to: FVGLSSIVGGFLRLFNSKEGQER*IAPSAT
Trigger: GGTTGCAGAGGGAGCAATTCATCTCTCTTGTCCCTC...CTTAGAGTTGAAAAGTCTAAGAAAGCCTCCCACAATACTAGAGAGGCCAACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
3UTR-3UTR GCA 90 bp GACACCCACCATACACTCAGCTCCTTTCTGAAAGTGTCCTCCCTTAGGCCTCTAGCTTCCTTATTTCAGTaGCATTTTGTTACTGTGGTT +
Preference number: 2 (lower is better)
Translates to: DTHHTLSSFLKVSSLRPLASLFQ*HFVTVV
Trigger: AACCACAGTAACAAAATGGCACTGAAATAAGGAAGC...TAGAGGCCTAAGGGAGGACACTTTCAGAAAGGAGCTGAGTGTATGGTGGGTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
3UTR-3UTR CCA 90 bp TTTGTTGGCCTCTCTAGTATTGTGGGAGGCTTTCTTAGACTTTTCAACTCTAAGCTTGGCTTGCACAGATaGCAGAAAGTGGCTCTGGGA +
Preference number: 2 (lower is better)
Translates to: FVGLSSIVGGFLRLFNSKLGLHR*QKVALG
Trigger: TCCCAGAGCCACTTTCTGCCATCTGTGCAAGCCAAG...CTTAGAGTTGAAAAGTCTAAGAAAGCCTCCCACAATACTAGAGAGGCCAACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
3UTR-3UTR TCA 90 bp TTTGTTGGCCTCTCTAGTATTGTGGGAGGCTTTCTTAGACTTTTCAACTCTAAGTGGGAGGGGATAAGATaGCATCTCTCTTGGCTCTTG +
Preference number: 2 (lower is better)
Translates to: FVGLSSIVGGFLRLFNSKWEGIR*HLSWLL
Trigger: CAAGAGCCAAGAGAGATGTCATCTTATCCCCTCCCA...CTTAGAGTTGAAAAGTCTAAGAAAGCCTCCCACAATACTAGAGAGGCCAACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
3UTR-3UTR TCA 90 bp TTTGTTGGCCTCTCTAGTATTGTGGGAGGCTTTCTTAGACTTTTCAACTCTAAGGGGAAGAGAGGGAACTaGGAAACCCCAAACCTAGAA +
Preference number: 2 (lower is better)
Translates to: FVGLSSIVGGFLRLFNSKGKRGN*ETPNLE
Trigger: TTCTAGGTTTGGGGTTTCTCAGTTCCCTCTCTTCCC...CTTAGAGTTGAAAAGTCTAAGAAAGCCTCCCACAATACTAGAGAGGCCAACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
3UTR-3UTR TCA 90 bp TTTGTTGGCCTCTCTAGTATTGTGGGAGGCTTTCTTAGACTTTTCAACTCTAAGGGTGATGGGCACTTGTaGACAGAAGACTCTAGCTCA +
Preference number: 2 (lower is better)
Translates to: FVGLSSIVGGFLRLFNSKGDGHL*TEDSSS
Trigger: TGAGCTAGAGTCTTCTGTTCACAAGTGCCCATCACC...CTTAGAGTTGAAAAGTCTAAGAAAGCCTCCCACAATACTAGAGAGGCCAACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
3UTR-3UTR TCA 90 bp AGTGACACCTTCCATGATGTTTGGTTCTGGTCCAGATGGATCTGGAAGACAAAGTTTCTCATTCCCCTGTaGCAGTCAATTTTGGAGACA +
Preference number: 2 (lower is better)
Translates to: SDTFHDVWFWSRWIWKTKFLIPL*QSILET
Trigger: TGTCTCCAAAATTGACTGTCACAGGGGAATGAGAAA...CTTTGTCTTCCAGATCCATCTGGACCAGAACCAAACATCATGGAAGGTGTCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
3UTR-3UTR TCA 90 bp AGCAATAACAAGGTAAGTGAAGTTACCTTTGACTATCAGAGAAGTTTCAGGGCACTAAAGGGGAAGTCCTaGGCACAAGTTACGGCTGTG +
Preference number: 2 (lower is better)
Translates to: SNNKVSEVTFDYQRSFRALKGKS*AQVTAV
Trigger: CACAGCCGTAACTTGTGCTCAGGACTTCCCCTTTAG...TGCCCTGAAACTTCTCTGATAGTCAAAGGTAACTTCACTTACCTTGTTATTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
3UTR-3UTR TCA 90 bp CTCCTGTCCAGACCAATGCATGGTTTTAGGGATACGACTAAAATGAAGACAAATACAGGGATAGAGAAGTaGGCGAGAGGAGGTTCAGTT +
Preference number: 2 (lower is better)
Translates to: LLSRPMHGFRDTTKMKTNTGIEK*ARGGSV
Trigger: AACTGAACCTCCTCTCGCTCACTTCTCTATCCCTGT...ATTTGTCTTCATTTTAGTCGTATCCCTAAAACCATGCATTGGTCTGGACAGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420353.7
3UTR-3UTR TCA 90 bp CTCCTGTCCAGACCAATGCATGGTTTTAGGGATACGACTAAAATGAAGACAAATGGTGCTAGAGGGCAGTaGATCAAGAAAGGAGCCAAA +
Preference number: 2 (lower is better)
Translates to: LLSRPMHGFRDTTKMKTNGARGQ*IKKGAK
Trigger: TTTGGCTCCTTTCTTGATTCACTGCCCTCTAGCACC...ATTTGTCTTCATTTTAGTCGTATCCCTAAAACCATGCATTGGTCTGGACAGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420353.7
3UTR-3UTR TCA 90 bp ACAAGAGGACTAATTTTCGGTGACGACAGACTTGTGCTGATCCATCATCTGGAAAAAGACCTGAATGGCTaGCTGGGATTAGTGACTACT +
Preference number: 2 (lower is better)
Translates to: TRGLIFGDDRLVLIHHLEKDLNG*LGLVTT
Trigger: AGTAGTCACTAATCCCAGTCAGCCATTCAGGTCTTT...TTCCAGATGATGGATCAGCACAAGTCTGTCGTCACCGAAAATTAGTCCTCTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000548118.6
ENST00000591397.1
3UTR-3UTR CCA 90 bp TTTGTTGGCCTCTCTAGTATTGTGGGAGGCTTTCTTAGACTTTTCAACTCTAAGGGGAGAGTGACCACATaGCTGGTAGCAATAACAAGG +
Preference number: 2 (lower is better)
Translates to: FVGLSSIVGGFLRLFNSKGRVTT*LVAITR
Trigger: CCTTGTTATTGCTACCAGCCATGTGGTCACTCTCCC...CTTAGAGTTGAAAAGTCTAAGAAAGCCTCCCACAATACTAGAGAGGCCAACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
3UTR-3UTR TCA 90 bp TTTGTTGGCCTCTCTAGTATTGTGGGAGGCTTTCTTAGACTTTTCAACTCTAAGCTATCTAGGGGGTTCTaGCCTGCTGCTTCCTTATTT +
Preference number: 2 (lower is better)
Translates to: FVGLSSIVGGFLRLFNSKLSRGF*PAASLF
Trigger: AAATAAGGAAGCAGCAGGTCAGAACCCCCTAGATAG...CTTAGAGTTGAAAAGTCTAAGAAAGCCTCCCACAATACTAGAGAGGCCAACAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
3UTR-3UTR GCA 90 bp TTTGTTGGCCTCTCTAGTATTGTGGGAGGCTTTCTTAGACTTTTCAACTCTAAGAGGACATTCTTGGCTTaGACAGATGGCAGAAAGTGG +
Preference number: 2 (lower is better)
Translates to: FVGLSSIVGGFLRLFNSKRTFLA*TDGRKW
Trigger: CCACTTTCTGCCATCTGTGCAAGCCAAGAATGTCCT...CTTAGAGTTGAAAAGTCTAAGAAAGCCTCCCACAATACTAGAGAGGCCAACAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
3UTR-3UTR CCA 90 bp CTCCTGTCCAGACCAATGCATGGTTTTAGGGATACGACTAAAATGAAGACAAATGACGCTTCAAGATCCTaGAGCACTGCATGTAAAGAG +
Preference number: 2 (lower is better)
Translates to: LLSRPMHGFRDTTKMKTNDASRS*STACKE
Trigger: CTCTTTACATGCAGTGCTCCAGGATCTTGAAGCGTC...ATTTGTCTTCATTTTAGTCGTATCCCTAAAACCATGCATTGGTCTGGACAGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420353.7
3UTR-3UTR CCA 90 bp CTCCTGTCCAGACCAATGCATGGTTTTAGGGATACGACTAAAATGAAGACAAATGTAACCACCTTGGTATaGGGTGGGGGAATTTATGTC +
Preference number: 2 (lower is better)
Translates to: LLSRPMHGFRDTTKMKTNVTTLV*GGGIYV
Trigger: GACATAAATTCCCCCACCCCATACCAAGGTGGTTAC...ATTTGTCTTCATTTTAGTCGTATCCCTAAAACCATGCATTGGTCTGGACAGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000420353.7
3UTR-3UTR TCA 90 bp AGTGTAGCTGAGAAGTCTGATCAGCTCAGAAAAGAGTGGAATTTGGCAACAAATAAAGACCTGAATGGCTaGCTGGGATTAGTGACTACT +
Preference number: 2 (lower is better)
Translates to: SVAEKSDQLRKEWNLATNKDLNG*LGLVTT
Trigger: AGTAGTCACTAATCCCAGTCAGCCATTCAGGTCTTT...ATTTGTTGCCAAATTCCACTCTTTTCTGAGCTGATCAGACTTCTCAGCTACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548118.6
ENST00000591397.1
3UTR-3UTR CCA 90 bp TTTGTTGGCCTCTCTAGTATTGTGGGAGGCTTTCTTAGACTTTTCAACTCTAAGCATGATGTTTGGTTCTaGTCCAGATGGATCTGGAAG +
Preference number: 2 (lower is better)
Translates to: FVGLSSIVGGFLRLFNSKHDVWF*SRWIWK
Trigger: CTTCCAGATCCATCTGGACCAGAACCAAACATCATG...CTTAGAGTTGAAAAGTCTAAGAAAGCCTCCCACAATACTAGAGAGGCCAACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
3UTR-3UTR CCA 90 bp TTTGTTGGCCTCTCTAGTATTGTGGGAGGCTTTCTTAGACTTTTCAACTCTAAGACGTACATGACCACATaGCTAAAAAGCCCCATATCT +
Preference number: 2 (lower is better)
Translates to: FVGLSSIVGGFLRLFNSKTYMTT*LKSPIS
Trigger: AGATATGGGGCTTTTTAGCCATGTGGTCATGTACGT...CTTAGAGTTGAAAAGTCTAAGAAAGCCTCCCACAATACTAGAGAGGCCAACAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
3UTR-3UTR CCA 90 bp ACAAGAGGACTAATTTTCGGTGACGACAGACTTGTGCTGATCCATCATCTGGAAACTATCTGGTTTTACTaGTTTTACTCTACTAAGCCC +
Preference number: 2 (lower is better)
Translates to: TRGLIFGDDRLVLIHHLETIWFY*FYSTKP
Trigger: GGGCTTAGTAGAGTAAAACCAGTAAAACCAGATAGT...TTCCAGATGATGGATCAGCACAAGTCTGTCGTCACCGAAAATTAGTCCTCTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000548118.6
ENST00000591397.1
3UTR-3UTR CCA 90 bp CTCCTGTCCAGACCAATGCATGGTTTTAGGGATACGACTAAAATGAAGACAAATTGCATTAGAATCACTTaGAGTGCTTTTAAACCCTGC +
Preference number: 2 (lower is better)
Translates to: LLSRPMHGFRDTTKMKTNCIRIT*SAFKPC
Trigger: GCAGGGTTTAAAAGCACTCCAAGTGATTCTAATGCA...ATTTGTCTTCATTTTAGTCGTATCCCTAAAACCATGCATTGGTCTGGACAGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000420353.7
3UTR-3UTR CCA 90 bp AGTGTAGCTGAGAAGTCTGATCAGCTCAGAAAAGAGTGGAATTTGGCAACAAATACTATCTGGTTTTACTaGTTTTACTCTACTAAGCCC +
Preference number: 2 (lower is better)
Translates to: SVAEKSDQLRKEWNLATNTIWFY*FYSTKP
Trigger: GGGCTTAGTAGAGTAAAACCAGTAAAACCAGATAGT...ATTTGTTGCCAAATTCCACTCTTTTCTGAGCTGATCAGACTTCTCAGCTACACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000548118.6
ENST00000591397.1
3UTR-3UTR CCA 90 bp AGTGTAGCTGAGAAGTCTGATCAGCTCAGAAAAGAGTGGAATTTGGCAACAAATAAACTAATACTCCCCTaGAAGAACAAGAGGACTAAT +
Preference number: 2 (lower is better)
Translates to: SVAEKSDQLRKEWNLATNKLILP*KNKRTN
Trigger: ATTAGTCCTCTTGTTCTTCCAGGGGAGTATTAGTTT...ATTTGTTGCCAAATTCCACTCTTTTCTGAGCTGATCAGACTTCTCAGCTACACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000548118.6
ENST00000591397.1
3UTR-3UTR CAA 90 bp CCAGTCCCAGGAGATTGTGAGAACCAGCTCACAGGGATCATGCTGAATCAGGTGTGGCAGCCTCCACTCTaGGGGCTGGAAGCTCATCTC +
Preference number: 3 (lower is better)
Translates to: PVPGDCENQLTGIMLNQVWQPPL*GLEAHL
Trigger: GAGATGAGCTTCCAGCCCCAAGAGTGGAGGCTGCCA...CACCTGATTCAGCATGATCCCTGTGAGCTGGTTCTCACAATCTCCTGGGACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420353.7
3UTR CCA 72 bp CACGTGCATGGGGCAGGGGTGATTGTTCGGACCATCTaGAAAGGCCTTTGGCTGTGGATGCATCAGAAACCC +
Preference number: 3 (lower is better)
Translates to: HVHGAGVIVRTI*KGLWLWMHQKP
Trigger: GGGTTTCTGATGCATCCACAGCCAAAGGCCTTTCCAGATGGTCCGAACAATCACCCCTGCCCCATGCACGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
3UTR CCA 72 bp GCATCCTCCTACCTGTCAAAGGCCACCACTGGGCACTaGGGAGACCCAGACCGAGTTGAGTTCCTTGATAAG +
Preference number: 3 (lower is better)
Translates to: ASSYLSKATTGH*GDPDRVEFLDK
Trigger: CTTATCAAGGAACTCAACTCGGTCTGGGTCTCCCCAGTGCCCAGTGGTGGCCTTTGACAGGTAGGAGGATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420353.7
3UTR TCA 72 bp TATTGCCATGTCCAAGGCAGATGGGAGGGGATAAGATaGCATCTCTCTTGGCTCTTGGGCGGGCGAGCTCTG +
Preference number: 3 (lower is better)
Translates to: YCHVQGRWEGIR*HLSWLLGGRAL
Trigger: CAGAGCTCGCCCGCCCAAGAGCCAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCTTGGACATGGCAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420353.7
ENST00000456903.8
ENST00000548446.6
3UTR CCA 72 bp ACTATGTTAGGATGTGGCAGCCTCCACTCTTGGGGCTaGAAGCTCATCTCCTCCCTGCCTGAAAGGTGTGTG +
Preference number: 3 (lower is better)
Translates to: TMLGCGSLHSWG*KLISSLPERCV
Trigger: CACACACCTTTCAGGCAGGGAGGAGATGAGCTTCCAGCCCCAAGAGTGGAGGCTGCCACATCCTAACATAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420353.7
3UTR CCA 72 bp GCTAGAGTGCTTGTGTATCGAGCACTCACATTGGAGTaGGGTGGGAAGCCTGAGTCCTGTATTCACATGAAC +
Preference number: 3 (lower is better)
Translates to: ARVLVYRALTLE*GGKPESCIHMN
Trigger: GTTCATGTGAATACAGGACTCAGGCTTCCCACCCCACTCCAATGTGAGTGCTCGATACACAAGCACTCTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
3UTR TCA 72 bp GCTTGGCTGGTCCTTACTGTAACAGAGAACATGGAGTaGCCAGTCTGCAAGGGAATATGGGACAACTCCTGT +
Preference number: 3 (lower is better)
Translates to: AWLVLTVTENME*PVCKGIWDNSC
Trigger: ACAGGAGTTGTCCCATATTCCCTTGCAGACTGGTCACTCCATGTTCTCTGTTACAGTAAGGACCAGCCAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420353.7
3UTR-3UTR CAA 90 bp GACACCCACCATACACTCAGCTCCTTTCTGAAAGTGTCCTCCCTTAGGCCTCTAAGGGTTTCTTTCTTTTaGGTGGCAGGTAGAGAGAAG +
Preference number: 3 (lower is better)
Translates to: DTHHTLSSFLKVSSLRPLRVSFF*VAGREK
Trigger: CTTCTCTCTACCTGCCACCAAAAAGAAAGAAACCCT...TAGAGGCCTAAGGGAGGACACTTTCAGAAAGGAGCTGAGTGTATGGTGGGTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
3UTR CCA 72 bp AGAAGGACATTCTTGGCTTGCACAGATGGCAGAAAGTaGCTCTGGGACAACTGGAAGGGTTTCATACGGAAA +
Preference number: 3 (lower is better)
Translates to: RRTFLACTDGRK*LWDNWKGFIRK
Trigger: TTTCCGTATGAAACCCTTCCAGTTGTCCCAGAGCCACTTTCTGCCATCTGTGCAAGCCAAGAATGTCCTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
3UTR CCA 72 bp GAAGGGCCAAGTGACACCTTCCATGATGTTTGGTTCTaGTCCAGATGGATCTGGAAGACAAAGATTTGGGGA +
Preference number: 3 (lower is better)
Translates to: EGPSDTFHDVWF*SRWIWKTKIWG
Trigger: TCCCCAAATCTTTGTCTTCCAGATCCATCTGGACCAGAACCAAACATCATGGAAGGTGTCACTTGGCCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
3UTR CCA 72 bp CCTGCCCCCAGAGTCTGTGATTCAATAAGTCTGGGATaGGGCCTGAGAATGTGTATTTCTAACAAGTTCCCA +
Preference number: 3 (lower is better)
Translates to: PAPRVCDSISLG*GLRMCISNKFP
Trigger: TGGGAACTTGTTAGAAATACACATTCTCAGGCCCCATCCCAGACTTATTGAATCACAGACTCTGGGGGCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420353.7
3UTR-3UTR CAA 90 bp TTTGTTGGCCTCTCTAGTATTGTGGGAGGCTTTCTTAGACTTTTCAACTCTAAGAGAACCTGGGGTCCTTaGCTGGGACCAGTTCTGCAC +
Preference number: 3 (lower is better)
Translates to: FVGLSSIVGGFLRLFNSKRTWGP*LGPVLH
Trigger: GTGCAGAACTGGTCCCAGCAAAGGACCCCAGGTTCT...CTTAGAGTTGAAAAGTCTAAGAAAGCCTCCCACAATACTAGAGAGGCCAACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
3UTR-3UTR CAA 90 bp GCTCTGGGACAACTGGAAGGGTTTCATACGGAAAGGCAATTAAAGCTGACCTATGACAAGAGAGATGAATaGCTCCCTCTGCAACCCAAC +
Preference number: 3 (lower is better)
Translates to: ALGQLEGFHTERQLKLTYDKRDE*LPLQPN
Trigger: GTTGGGTTGCAGAGGGAGCAATTCATCTCTCTTGTC...ATAGGTCAGCTTTAATTGCCTTTCCGTATGAAACCCTTCCAGTTGTCCCAGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
3UTR-3UTR CAA 90 bp AGCAATAACAAGGTAAGTGAAGTTACCTTTGACTATCAGAGAAGTTTCAGGGCAAAGATGACATCTCTCTaGGCTCTTGGGCGGGCGAGC +
Preference number: 3 (lower is better)
Translates to: SNNKVSEVTFDYQRSFRAKMTSL*ALGRAS
Trigger: GCTCGCCCGCCCAAGAGCCAAGAGAGATGTCATCTT...TGCCCTGAAACTTCTCTGATAGTCAAAGGTAACTTCACTTACCTTGTTATTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
3UTR-3UTR CAA 90 bp CCAGTCCCAGGAGATTGTGAGAACCAGCTCACAGGGATCATGCTGAATCAGGTGTTGATGGAACAAGCTTaGAAATACTTTGTTCCTGTC +
Preference number: 3 (lower is better)
Translates to: PVPGDCENQLTGIMLNQVLMEQA*KYFVPV
Trigger: GACAGGAACAAAGTATTTCAAAGCTTGTTCCATCAA...CACCTGATTCAGCATGATCCCTGTGAGCTGGTTCTCACAATCTCCTGGGACTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420353.7
3UTR-3UTR CAA 90 bp AGTGACACCTTCCATGATGTTTGGTTCTGGTCCAGATGGATCTGGAAGACAAAGAACCCACTCAGCATCTaGGCTATGACGCTTCAAGAT +
Preference number: 3 (lower is better)
Translates to: SDTFHDVWFWSRWIWKTKNPLSI*AMTLQD
Trigger: ATCTTGAAGCGTCATAGCCAAGATGCTGAGTGGGTT...CTTTGTCTTCCAGATCCATCTGGACCAGAACCAAACATCATGGAAGGTGTCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
3UTR TCA 72 bp CCATTTTGTTACTGTGGTTCTGGCAGTGCTCCTCACTaGGGTCCCGTACACATCTTCCCACTGATAAAAATG +
Preference number: 3 (lower is better)
Translates to: PFCYCGSGSAPH*GPVHIFPLIKM
Trigger: CATTTTTATCAGTGGGAAGATGTGTACGGGACCTCAGTGAGGAGCACTGCCAGAACCACAGTAACAAAATGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
3UTR-3UTR CAA 90 bp CCCACCACTACACTAAAGTCAAGGGACAAAATGAGGTACCCAAATAGCTCTGCAAGGGTTTCTTTCTTTTaGGTGGCAGGTAGAGAGAAG +
Preference number: 3 (lower is better)
Translates to: PTTTLKSRDKMRYPNSSARVSFF*VAGREK
Trigger: CTTCTCTCTACCTGCCACCAAAAAGAAAGAAACCCT...TGCAGAGCTATTTGGGTACCTCATTTTGTCCCTTGACTTTAGTGTAGTGGTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
3UTR TCA 72 bp ATGAGAAGCCTTAACGTGGAAGAGGGACAAGAGAGATaGATTGCTCCCTCTGCAACCCAACTCTTCAAAGTA +
Preference number: 3 (lower is better)
Translates to: MRSLNVEEGQER*IAPSATQLFKV
Trigger: TACTTTGAAGAGTTGGGTTGCAGAGGGAGCAATTCATCTCTCTTGTCCCTCTTCCACGTTAAGGCTTCTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
3UTR-3UTR CAA 90 bp TTTGTTGGCCTCTCTAGTATTGTGGGAGGCTTTCTTAGACTTTTCAACTCTAAGGAGAGAAGGACATTCTaGGCTTGCACAGATGGCAGA +
Preference number: 3 (lower is better)
Translates to: FVGLSSIVGGFLRLFNSKERRTF*ACTDGR
Trigger: TCTGCCATCTGTGCAAGCCAAGAATGTCCTTCTCTC...CTTAGAGTTGAAAAGTCTAAGAAAGCCTCCCACAATACTAGAGAGGCCAACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
3UTR TCA 72 bp CACTACCAAGCAATCTTTAATAATAAGGCCACAAAATaGGGTTGCCAAGGCTTAGTGGGGTGGTGGGAAAGA +
Preference number: 3 (lower is better)
Translates to: HYQAIFNNKATK*GCQGLVGWWER
Trigger: TCTTTCCCACCACCCCACTAAGCCTTGGCAACCTCATTTTGTGGCCTTATTATTAAAGATTGCTTGGTAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
3UTR TCA 72 bp GATCCATCATCTGGAACTCCTAAAGACCTGAATGGCTaGCTGGGATTAGTGACTACTATCTGGTTTTACTGG +
Preference number: 3 (lower is better)
Translates to: DPSSGTPKDLNG*LGLVTTIWFYW
Trigger: CCAGTAAAACCAGATAGTAGTCACTAATCCCAGTCAGCCATTCAGGTCTTTAGGAGTTCCAGATGATGGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548118.6
ENST00000591397.1
3UTR-3UTR CAA 90 bp TTTGTTGGCCTCTCTAGTATTGTGGGAGGCTTTCTTAGACTTTTCAACTCTAAGAACCCACTCAGCATCTaGGCTATGACGCTTCAAGAT +
Preference number: 3 (lower is better)
Translates to: FVGLSSIVGGFLRLFNSKNPLSI*AMTLQD
Trigger: ATCTTGAAGCGTCATAGCCAAGATGCTGAGTGGGTT...CTTAGAGTTGAAAAGTCTAAGAAAGCCTCCCACAATACTAGAGAGGCCAACAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
3UTR CCA 72 bp GGGGAGACCCAGACCGAGTTGAGTTCCTTGATAAGATaGAGAGGTGTTGCTACATGTCAAAAATATATAGAT +
Preference number: 3 (lower is better)
Translates to: GETQTELSSLIR*RGVATCQKYID
Trigger: ATCTATATATTTTTGACATGTAGCAACACCTCTCCATCTTATCAAGGAACTCAACTCGGTCTGGGTCTCCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420353.7
3UTR-3UTR CAA 90 bp AGTGACACCTTCCATGATGTTTGGTTCTGGTCCAGATGGATCTGGAAGACAAAGTTGATGGAACAAGCTTaGAAATACTTTGTTCCTGTC +
Preference number: 3 (lower is better)
Translates to: SDTFHDVWFWSRWIWKTKLMEQA*KYFVPV
Trigger: GACAGGAACAAAGTATTTCAAAGCTTGTTCCATCAA...CTTTGTCTTCCAGATCCATCTGGACCAGAACCAAACATCATGGAAGGTGTCACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
3UTR-3UTR CAA 90 bp AGCAATAACAAGGTAAGTGAAGTTACCTTTGACTATCAGAGAAGTTTCAGGGCATATTTCAGTGCCATTTaGTTACTGTGGTTCTGGCAG +
Preference number: 3 (lower is better)
Translates to: SNNKVSEVTFDYQRSFRAYFSAI*LLWFWQ
Trigger: CTGCCAGAACCACAGTAACAAAATGGCACTGAAATA...TGCCCTGAAACTTCTCTGATAGTCAAAGGTAACTTCACTTACCTTGTTATTGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
3UTR GCA 72 bp AGCTTATCCCTAAGAAATGGTTCTCAACCTTTAGTGTaGATTAGAATCACTTGGAGTGCTTTTAAACCCTGC +
Preference number: 3 (lower is better)
Translates to: SLSLRNGSQPLV*IRITWSAFKPC
Trigger: GCAGGGTTTAAAAGCACTCCAAGTGATTCTAATGCACACTAAAGGTTGAGAACCATTTCTTAGGGATAAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420353.7
CDS-3UTR GCA 90 bp AGGATGACCAGGCCTGGTCCTCTGTGCCTGGGGCTGGCAGTCAGGGCAACACAGGCGGCAGCGGGAGGCTaGAGCCCGGTTGCGCTCCAG +
Preference number: 4 (lower is better)
Translates to: RMTRPGPLCLGLAVRATQAAAGG*SPVALQ
Trigger: CTGGAGCGCAACCGGGCTGCAGCCTCCCGCTGCCGC...CTGTGTTGCCCTGACTGCCAGCCCCAGGCACAGAGGACCAGGCCTGGTCATCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548446.6
CDS-3UTR GCA 90 bp AGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGGCTCTTGGGCGGGCGAGCGCGGCAGCGGGAGGCTaGAGCCCGGTTGCGCTCCAG +
Preference number: 4 (lower is better)
Translates to: RQMGGDKMTSLLALGRASAAAGG*SPVALQ
Trigger: CTGGAGCGCAACCGGGCTGCAGCCTCCCGCTGCCGC...GCTCGCCCGCCCAAGAGCCAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420353.7
ENST00000456903.8
ENST00000548446.6
CDS-3UTR CCA 90 bp AGGATGACCAGGCCTGGTCCTCTGTGCCTGGGGCTGGCAGTCAGGGCAACACAGGAGGGAGGGAGCCAGTaGGAGACCCCATTTGCCTGT +
Preference number: 4 (lower is better)
Translates to: RMTRPGPLCLGLAVRATQEGGSQ*ETPFAC
Trigger: ACAGGCAAATGGGGTCTCCCACTGGCTCCCTCCCTC...CTGTGTTGCCCTGACTGCCAGCCCCAGGCACAGAGGACCAGGCCTGGTCATCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548446.6
CDS-3UTR GCA 90 bp CCAGTCCCAGGAGATTGTGAGAACCAGCTCACAGGGATCATGCTGAATCAGGTGGCGGCAGCGGGAGGCTaGAGCCCGGTTGCGCTCCAG +
Preference number: 4 (lower is better)
Translates to: PVPGDCENQLTGIMLNQVAAAGG*SPVALQ
Trigger: CTGGAGCGCAACCGGGCTGCAGCCTCCCGCTGCCGC...CACCTGATTCAGCATGATCCCTGTGAGCTGGTTCTCACAATCTCCTGGGACTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420353.7
CDS-3UTR CCA 90 bp AGGATGACCAGGCCTGGTCCTCTGTGCCTGGGGCTGGCAGTCAGGGCAACACAGGAATGTTGGGCACCATaGACACAGGTCTGGCCAGCG +
Preference number: 4 (lower is better)
Translates to: RMTRPGPLCLGLAVRATQECWAP*TQVWPA
Trigger: CGCTGGCCAGACCTGTGTCCATGGTGCCCAACATTC...CTGTGTTGCCCTGACTGCCAGCCCCAGGCACAGAGGACCAGGCCTGGTCATCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548446.6
CDS-3UTR TCA 90 bp AGGATGACCAGGCCTGGTCCTCTGTGCCTGGGGCTGGCAGTCAGGGCAACACAGATCTGCAATGATGACTaGGTCAGTTCGGGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: RMTRPGPLCLGLAVRATQICNDD*VSSGWA
Trigger: GGCCCAGCCCGAACTGACTCAGTCATCATTGCAGAT...CTGTGTTGCCCTGACTGCCAGCCCCAGGCACAGAGGACCAGGCCTGGTCATCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548446.6
CDS-3UTR TCA 90 bp AGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGGCTCTTGGGCGGGCGAGCGTACTAGGGGTGGGCTaGGCTGGTGAGACCTGTGGC +
Preference number: 4 (lower is better)
Translates to: RQMGGDKMTSLLALGRASVLGVG*AGETCG
Trigger: GCCACAGGTCTCACCAGCTCAGCCCACCCCTAGTAC...GCTCGCCCGCCCAAGAGCCAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420353.7
ENST00000456903.8
ENST00000548446.6
CDS-3UTR TCA 90 bp AGGATGACCAGGCCTGGTCCTCTGTGCCTGGGGCTGGCAGTCAGGGCAACACAGAGAACCCGTTGGCTCTaGGCTTTCCTTGGGGCTTTC +
Preference number: 4 (lower is better)
Translates to: RMTRPGPLCLGLAVRATQRTRWL*AFLGAF
Trigger: GAAAGCCCCAAGGAAAGCTCAGAGCCAACGGGTTCT...CTGTGTTGCCCTGACTGCCAGCCCCAGGCACAGAGGACCAGGCCTGGTCATCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548446.6
CDS-3UTR TCA 90 bp GGGGTAGAACAAAGGAACTCGAGAGTCCCCTACATGACAGCCTCCAGGAGGGCTGGCTGGCCATCTGAGTaGGGACCGAGGTGGCCACAG +
Preference number: 4 (lower is better)
Translates to: GVEQRNSRVPYMTASRRAGWPSE*GPRWPQ
Trigger: CTGTGGCCACCTCGGTCCTCACTCAGATGGCCAGCC...AGCCCTCCTGGAGGCTGTCATGTAGGGGACTCTCGAGTTCCTTTGTTCTACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CCA 90 bp AGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGGCTCTTGGGCGGGCGAGCTGGCTGGGCAGGGGATaGGGCATCAGGGTGCTGGAT +
Preference number: 4 (lower is better)
Translates to: RQMGGDKMTSLLALGRASWLGRG*GIRVLD
Trigger: ATCCAGCACCCTGATGCCCCATCCCCTGCCCAGCCA...GCTCGCCCGCCCAAGAGCCAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420353.7
ENST00000456903.8
ENST00000548446.6
CDS-3UTR CCA 90 bp AGGATGACCAGGCCTGGTCCTCTGTGCCTGGGGCTGGCAGTCAGGGCAACACAGCATCTGCCCGCAGACTaGGACTGTGGGGTCATGATT +
Preference number: 4 (lower is better)
Translates to: RMTRPGPLCLGLAVRATQHLPAD*DCGVMI
Trigger: AATCATGACCCCACAGTCCCAGTCTGCGGGCAGATG...CTGTGTTGCCCTGACTGCCAGCCCCAGGCACAGAGGACCAGGCCTGGTCATCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548446.6
CDS-3UTR TCA 90 bp GGAAAGGAAGACAGTATGGTTAGGGAGAATAGAGCGAAGCCCCTGCCTCAGCCCCTGGGGGATGATCTATaGGGCTCCGGGGCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: GKEDSMVRENRAKPLPQPLGDDL*GSGAGR
Trigger: CCTCCCAGCCCCGGAGCCTCATAGATCATCCCCCAG...GGGCTGAGGCAGGGGCTTCGCTCTATTCTCCCTAACCATACTGTCTTCCTTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000420353.7
CDS-3UTR GCA 90 bp GAGTGCTTGTGTATCGAGCACTCACATTGGAGTGGGGTGGGAAGCCTGAGTCCTAGGCTGCAGCCCGGTTaGGCTCCAGAAAGCGCTGCC +
Preference number: 4 (lower is better)
Translates to: ECLCIEHSHWSGVGSLSPRLQPG*APESAA
Trigger: GGCAGCGCTTTCTGGAGCGCAACCGGGCTGCAGCCT...AGGACTCAGGCTTCCCACCCCACTCCAATGTGAGTGCTCGATACACAAGCACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CCA 90 bp AGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGGCTCTTGGGCGGGCGAGCGAGGGAGGGAGCCAGTaGGAGACCCCATTTGCCTGT +
Preference number: 4 (lower is better)
Translates to: RQMGGDKMTSLLALGRASEGGSQ*ETPFAC
Trigger: ACAGGCAAATGGGGTCTCCCACTGGCTCCCTCCCTC...GCTCGCCCGCCCAAGAGCCAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420353.7
ENST00000456903.8
ENST00000548446.6
CDS-3UTR CCA 90 bp GGGGTAGAACAAAGGAACTCGAGAGTCCCCTACATGACAGCCTCCAGGAGGGCTGGTGAGACCTGTGGCTaGGCAGGGGATGGGGCATCA +
Preference number: 4 (lower is better)
Translates to: GVEQRNSRVPYMTASRRAGETCG*AGDGAS
Trigger: TGATGCCCCATCCCCTGCCCAGCCACAGGTCTCACC...AGCCCTCCTGGAGGCTGTCATGTAGGGGACTCTCGAGTTCCTTTGTTCTACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CCA 90 bp AGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGGCTCTTGGGCGGGCGAGCAGGAGCCTCTCAGTGTaGAGCAGGGGAGCCCCAGAA +
Preference number: 4 (lower is better)
Translates to: RQMGGDKMTSLLALGRASRSLSV*SRGAPE
Trigger: TTCTGGGGCTCCCCTGCTCCACACTGAGAGGCTCCT...GCTCGCCCGCCCAAGAGCCAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR TCA 90 bp GAGTGCTTGTGTATCGAGCACTCACATTGGAGTGGGGTGGGAAGCCTGAGTCCTCGAGAGTCCCCTACATaGCAGCCTCCAGGAGGGCTG +
Preference number: 4 (lower is better)
Translates to: ECLCIEHSHWSGVGSLSPRESPT*QPPGGL
Trigger: CAGCCCTCCTGGAGGCTGTCATGTAGGGGACTCTCG...AGGACTCAGGCTTCCCACCCCACTCCAATGTGAGTGCTCGATACACAAGCACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR GCA 90 bp CCACCCATATTGCCATGTCCAAGGCAGATGGGAGGGGATAAGATGACATCTCTCCCGTTGCCTCCCGCCTaGCCGCGCTCGGTCCTACAA +
Preference number: 4 (lower is better)
Translates to: PPILPCPRQMGGDKMTSLPLPPA*PRSVLQ
Trigger: TTGTAGGACCGAGCGCGGGCAGGCGGGAGGCAACGG...GAGAGATGTCATCTTATCCCCTCCCATCTGCCTTGGACATGGCAATATGGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000548446.6
CDS-3UTR GCA 90 bp AGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGGCTCTTGGGCGGGCGAGCGTGGGAGACCCCATTTaGCTGTTGGATGGTGGAGCC +
Preference number: 4 (lower is better)
Translates to: RQMGGDKMTSLLALGRASVGDPI*LLDGGA
Trigger: GGCTCCACCATCCAACAGGCAAATGGGGTCTCCCAC...GCTCGCCCGCCCAAGAGCCAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420353.7
ENST00000456903.8
ENST00000548446.6
CDS-3UTR GCA 90 bp AGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGGCTCTTGGGCGGGCGAGCATGAGAATCTGGCTCTaGTCTGGGCGGGCTGTCACC +
Preference number: 4 (lower is better)
Translates to: RQMGGDKMTSLLALGRASMRIWL*SGRAVT
Trigger: GGTGACAGCCCGCCCAGAGCAGAGCCAGATTCTCAT...GCTCGCCCGCCCAAGAGCCAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420353.7
ENST00000456903.8
ENST00000548446.6
CDS-3UTR CCA 90 bp AGGATGACCAGGCCTGGTCCTCTGTGCCTGGGGCTGGCAGTCAGGGCAACACAGTTGCCTGTTGGATGGTaGAGCCTGTGTGATGACAGA +
Preference number: 4 (lower is better)
Translates to: RMTRPGPLCLGLAVRATQLPVGW*SLCDDR
Trigger: TCTGTCATCACACAGGCTCCACCATCCAACAGGCAA...CTGTGTTGCCCTGACTGCCAGCCCCAGGCACAGAGGACCAGGCCTGGTCATCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548446.6
CDS-3UTR CCA 90 bp AGGATGACCAGGCCTGGTCCTCTGTGCCTGGGGCTGGCAGTCAGGGCAACACAGCATTTGCCTGTTGGATaGTGGAGCCTGTGTGATGAC +
Preference number: 4 (lower is better)
Translates to: RMTRPGPLCLGLAVRATQHLPVG*WSLCDD
Trigger: GTCATCACACAGGCTCCACCATCCAACAGGCAAATG...CTGTGTTGCCCTGACTGCCAGCCCCAGGCACAGAGGACCAGGCCTGGTCATCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548446.6
CDS-3UTR CCA 90 bp AGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGGCTCTTGGGCGGGCGAGCCTGTACTGGAGGCCCTaGCAACACAGGCATGGTCTG +
Preference number: 4 (lower is better)
Translates to: RQMGGDKMTSLLALGRASLYWRP*QHRHGL
Trigger: CAGACCATGCCTGTGTTGCCAGGGCCTCCAGTACAG...GCTCGCCCGCCCAAGAGCCAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420353.7
ENST00000456903.8
ENST00000548446.6
CDS-3UTR CCA 90 bp AGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGGCTCTTGGGCGGGCGAGCAGACGGCATCTGTACTaGAGGCCCTGGCAACACAGG +
Preference number: 4 (lower is better)
Translates to: RQMGGDKMTSLLALGRASRRHLY*RPWQHR
Trigger: CCTGTGTTGCCAGGGCCTCCAGTACAGATGCCGTCT...GCTCGCCCGCCCAAGAGCCAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420353.7
ENST00000456903.8
ENST00000548446.6
CDS-3UTR CCA 90 bp AGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGGCTCTTGGGCGGGCGAGCTGCTGGATGAGAATCTaGCTCTGCTCTGGGCGGGCT +
Preference number: 4 (lower is better)
Translates to: RQMGGDKMTSLLALGRASCWMRI*LCSGRA
Trigger: AGCCCGCCCAGAGCAGAGCCAGATTCTCATCCAGCA...GCTCGCCCGCCCAAGAGCCAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420353.7
ENST00000456903.8
ENST00000548446.6
CDS-3UTR CCA 90 bp GGGGTAGAACAAAGGAACTCGAGAGTCCCCTACATGACAGCCTCCAGGAGGGCTCACAGCTTTCGCTTTTaGCGGCAGCGGGAGGCTGCA +
Preference number: 4 (lower is better)
Translates to: GVEQRNSRVPYMTASRRAHSFRF*RQREAA
Trigger: TGCAGCCTCCCGCTGCCGCCAAAAGCGAAAGCTGTG...AGCCCTCCTGGAGGCTGTCATGTAGGGGACTCTCGAGTTCCTTTGTTCTACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CCA 90 bp GGGGTAGAACAAAGGAACTCGAGAGTCCCCTACATGACAGCCTCCAGGAGGGCTTCCCAGGCCAGAACCTaGGGTCCTTTGCTGGGACCA +
Preference number: 4 (lower is better)
Translates to: GVEQRNSRVPYMTASRRASQART*GPLLGP
Trigger: TGGTCCCAGCAAAGGACCCCAGGTTCTGGCCTGGGA...AGCCCTCCTGGAGGCTGTCATGTAGGGGACTCTCGAGTTCCTTTGTTCTACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CCA 90 bp GGAAAGGAAGACAGTATGGTTAGGGAGAATAGAGCGAAGCCCCTGCCTCAGCCCTGTCCCCTCCCTCTGTaGCCTTGGGTACGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: GKEDSMVRENRAKPLPQPCPLPL*PWVRGS
Trigger: GCTGCCACGTACCCAAGGCCACAGAGGGAGGGGACA...GGGCTGAGGCAGGGGCTTCGCTCTATTCTCCCTAACCATACTGTCTTCCTTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420353.7
CDS-3UTR TCA 90 bp AGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGGCTCTTGGGCGGGCGAGCATCTGCAATGATGACTaGGTCAGTTCGGGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: RQMGGDKMTSLLALGRASICNDD*VSSGWA
Trigger: GGCCCAGCCCGAACTGACTCAGTCATCATTGCAGAT...GCTCGCCCGCCCAAGAGCCAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420353.7
ENST00000456903.8
ENST00000548446.6
CDS-3UTR TCA 90 bp AGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGGCTCTTGGGCGGGCGAGCCATCAGGGTGCTGGATaGGAATCTGGCTCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: RQMGGDKMTSLLALGRASHQGAG*ESGSAL
Trigger: CAGAGCAGAGCCAGATTCTCATCCAGCACCCTGATG...GCTCGCCCGCCCAAGAGCCAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420353.7
ENST00000456903.8
ENST00000548446.6
CDS-3UTR TCA 90 bp GACACCCACCATACACTCAGCTCCTTTCTGAAAGTGTCCTCCCTTAGGCCTCTAGGCTGGCCATCTGAGTaGGGACCGAGGTGGCCACAG +
Preference number: 4 (lower is better)
Translates to: DTHHTLSSFLKVSSLRPLGWPSE*GPRWPQ
Trigger: CTGTGGCCACCTCGGTCCTCACTCAGATGGCCAGCC...TAGAGGCCTAAGGGAGGACACTTTCAGAAAGGAGCTGAGTGTATGGTGGGTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR GCA 90 bp GACACCCACCATACACTCAGCTCCTTTCTGAAAGTGTCCTCCCTTAGGCCTCTAAGGCTGCAGCCCGGTTaGGCTCCAGAAAGCGCTGCC +
Preference number: 4 (lower is better)
Translates to: DTHHTLSSFLKVSSLRPLRLQPG*APESAA
Trigger: GGCAGCGCTTTCTGGAGCGCAACCGGGCTGCAGCCT...TAGAGGCCTAAGGGAGGACACTTTCAGAAAGGAGCTGAGTGTATGGTGGGTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR GCA 90 bp GAGTGCTTGTGTATCGAGCACTCACATTGGAGTGGGGTGGGAAGCCTGAGTCCTGGCCACAGCTTCAGCTaGAGAGCGAACACTGAGGCC +
Preference number: 4 (lower is better)
Translates to: ECLCIEHSHWSGVGSLSPGHSFS*RANTEA
Trigger: GGCCTCAGTGTTCGCTCTGCAGCTGAAGCTGTGGCC...AGGACTCAGGCTTCCCACCCCACTCCAATGTGAGTGCTCGATACACAAGCACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR GCA 90 bp GAGTGCTTGTGTATCGAGCACTCACATTGGAGTGGGGTGGGAAGCCTGAGTCCTATAGAGCGAAGCCCCTaGCTCAGCCCAGTCCCAGGA +
Preference number: 4 (lower is better)
Translates to: ECLCIEHSHWSGVGSLSPIERSP*LSPVPG
Trigger: TCCTGGGACTGGGCTGAGGCAGGGGCTTCGCTCTAT...AGGACTCAGGCTTCCCACCCCACTCCAATGTGAGTGCTCGATACACAAGCACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420353.7
CDS-3UTR CCA 90 bp AGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGGCTCTTGGGCGGGCGAGCCTTCTCCTTCAGTGGTaGGGAACAGGGACTAGAGGC +
Preference number: 4 (lower is better)
Translates to: RQMGGDKMTSLLALGRASLLLQW*GTGTRG
Trigger: GCCTCTAGTCCCTGTTCCCCACCACTGAAGGAGAAG...GCTCGCCCGCCCAAGAGCCAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420353.7
ENST00000456903.8
ENST00000548446.6
CDS-3UTR CCA 90 bp AGGATGACCAGGCCTGGTCCTCTGTGCCTGGGGCTGGCAGTCAGGGCAACACAGAAGGGTTGGATGAAGTaGATCATAGCCCAAGTGGAG +
Preference number: 4 (lower is better)
Translates to: RMTRPGPLCLGLAVRATQKGWMK*IIAQVE
Trigger: CTCCACTTGGGCTATGATCCACTTCATCCAACCCTT...CTGTGTTGCCCTGACTGCCAGCCCCAGGCACAGAGGACCAGGCCTGGTCATCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548446.6
CDS-3UTR CCA 90 bp CCAGTCCCAGGAGATTGTGAGAACCAGCTCACAGGGATCATGCTGAATCAGGTGTGGCTGGGCAGGGGATaGGGCATCAGGGTGCTGGAT +
Preference number: 4 (lower is better)
Translates to: PVPGDCENQLTGIMLNQVWLGRG*GIRVLD
Trigger: ATCCAGCACCCTGATGCCCCATCCCCTGCCCAGCCA...CACCTGATTCAGCATGATCCCTGTGAGCTGGTTCTCACAATCTCCTGGGACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420353.7
CDS-3UTR CCA 90 bp AGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGGCTCTTGGGCGGGCGAGCCATCTGCCCGCAGACTaGGACTGTGGGGTCATGATT +
Preference number: 4 (lower is better)
Translates to: RQMGGDKMTSLLALGRASHLPAD*DCGVMI
Trigger: AATCATGACCCCACAGTCCCAGTCTGCGGGCAGATG...GCTCGCCCGCCCAAGAGCCAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420353.7
ENST00000456903.8
ENST00000548446.6
CDS-3UTR CCA 90 bp GGGGTAGAACAAAGGAACTCGAGAGTCCCCTACATGACAGCCTCCAGGAGGGCTGCACTCACATTGGAGTaGGGTGGGAAGCCTGAGTCC +
Preference number: 4 (lower is better)
Translates to: GVEQRNSRVPYMTASRRAALTLE*GGKPES
Trigger: GGACTCAGGCTTCCCACCCCACTCCAATGTGAGTGC...AGCCCTCCTGGAGGCTGTCATGTAGGGGACTCTCGAGTTCCTTTGTTCTACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CCA 90 bp AGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGGCTCTTGGGCGGGCGAGCCTCCATCTACCAGGATaGGTGGTGCTAGAGGGCAGT +
Preference number: 4 (lower is better)
Translates to: RQMGGDKMTSLLALGRASLHLPG*VVLEGS
Trigger: ACTGCCCTCTAGCACCACCCATCCTGGTAGATGGAG...GCTCGCCCGCCCAAGAGCCAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CCA 90 bp GGAAAGGAAGACAGTATGGTTAGGGAGAATAGAGCGAAGCCCCTGCCTCAGCCCAGGAGCCTCTCAGTGTaGAGCAGGGGAGCCCCAGAA +
Preference number: 4 (lower is better)
Translates to: GKEDSMVRENRAKPLPQPRSLSV*SRGAPE
Trigger: TTCTGGGGCTCCCCTGCTCCACACTGAGAGGCTCCT...GGGCTGAGGCAGGGGCTTCGCTCTATTCTCCCTAACCATACTGTCTTCCTTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000420353.7
CDS-3UTR TCA 90 bp GGGGTAGAACAAAGGAACTCGAGAGTCCCCTACATGACAGCCTCCAGGAGGGCTCATCAGGGTGCTGGATaGGAATCTGGCTCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: GVEQRNSRVPYMTASRRAHQGAG*ESGSAL
Trigger: CAGAGCAGAGCCAGATTCTCATCCAGCACCCTGATG...AGCCCTCCTGGAGGCTGTCATGTAGGGGACTCTCGAGTTCCTTTGTTCTACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR TCA 90 bp CTCTGCTTGTGTGCCTCTTGGAGGCTACTCAGATTTGCAACACACAATTCCCCCGTACTAGGGGTGGGCTaGGCTGGTGAGACCTGTGGC +
Preference number: 4 (lower is better)
Translates to: LCLCASWRLLRFATHNSPVLGVG*AGETCG
Trigger: GCCACAGGTCTCACCAGCTCAGCCCACCCCTAGTAC...GGGGGAATTGTGTGTTGCAAATCTGAGTAGCCTCCAAGAGGCACACAAGCAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548446.6
CDS-3UTR TCA 90 bp AGGATGACCAGGCCTGGTCCTCTGTGCCTGGGGCTGGCAGTCAGGGCAACACAGGAATGTTCTGAGAAGTaGGTTCTTCGGCCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: RMTRPGPLCLGLAVRATQECSEK*VLRPSS
Trigger: AGAAGAAGGCCGAAGAACTCACTTCTCAGAACATTC...CTGTGTTGCCCTGACTGCCAGCCCCAGGCACAGAGGACCAGGCCTGGTCATCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548446.6
CDS-3UTR TCA 90 bp CCCATATTGCCATGTCCAAGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGGGCTGGCCATCTGAGTaGGGACCGAGGTGGCCACAG +
Preference number: 4 (lower is better)
Translates to: PILPCPRQMGGDKMTSLLGWPSE*GPRWPQ
Trigger: CTGTGGCCACCTCGGTCCTCACTCAGATGGCCAGCC...CAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCTTGGACATGGCAATATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420353.7
ENST00000456903.8
ENST00000548446.6
CDS-3UTR TCA 90 bp AGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGGCTCTTGGGCGGGCGAGCAGAGCCAAGGGGAGATaGGAAGCCTTAACGTGGAAG +
Preference number: 4 (lower is better)
Translates to: RQMGGDKMTSLLALGRASRAKGR*EALTWK
Trigger: CTTCCACGTTAAGGCTTCTCATCTCCCCTTGGCTCT...GCTCGCCCGCCCAAGAGCCAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR TCA 90 bp AGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGGCTCTTGGGCGGGCGAGCCTAAAGGGGAAGTCCTaGGCACAAGTTACGGCTGTG +
Preference number: 4 (lower is better)
Translates to: RQMGGDKMTSLLALGRASLKGKS*AQVTAV
Trigger: CACAGCCGTAACTTGTGCTCAGGACTTCCCCTTTAG...GCTCGCCCGCCCAAGAGCCAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR TCA 90 bp AGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGGCTCTTGGGCGGGCGAGCAGTCCCAGGAGATTGTaGGAACCAGCTCACAGGGAT +
Preference number: 4 (lower is better)
Translates to: RQMGGDKMTSLLALGRASSPRRL*EPAHRD
Trigger: ATCCCTGTGAGCTGGTTCTCACAATCTCCTGGGACT...GCTCGCCCGCCCAAGAGCCAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420353.7
CDS-3UTR GCA 90 bp ATATTGCCATGTCCAAGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGGCTCCGTTGCCTCCCGCCTaGCCGCGCTCGGTCCTACAA +
Preference number: 4 (lower is better)
Translates to: ILPCPRQMGGDKMTSLLAPLPPA*PRSVLQ
Trigger: TTGTAGGACCGAGCGCGGGCAGGCGGGAGGCAACGG...AGCCAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCTTGGACATGGCAATAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000548446.6
CDS-3UTR GCA 90 bp GAGTGCTTGTGTATCGAGCACTCACATTGGAGTGGGGTGGGAAGCCTGAGTCCTCACAGCCCGGGGCATTaGACACAAACGGTCTGTCGT +
Preference number: 4 (lower is better)
Translates to: ECLCIEHSHWSGVGSLSPHSPGH*TQTVCR
Trigger: ACGACAGACCGTTTGTGTGCAATGCCCCGGGCTGTG...AGGACTCAGGCTTCCCACCCCACTCCAATGTGAGTGCTCGATACACAAGCACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR GCA 90 bp CCCATATTGCCATGTCCAAGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGAGGCTGCAGCCCGGTTaGGCTCCAGAAAGCGCTGCC +
Preference number: 4 (lower is better)
Translates to: PILPCPRQMGGDKMTSLLRLQPG*APESAA
Trigger: GGCAGCGCTTTCTGGAGCGCAACCGGGCTGCAGCCT...CAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCTTGGACATGGCAATATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420353.7
ENST00000456903.8
ENST00000548446.6
CDS-3UTR CCA 90 bp GAGTGCTTGTGTATCGAGCACTCACATTGGAGTGGGGTGGGAAGCCTGAGTCCTCTGTACTGGAGGCCCTaGCAACACAGGCATGGTCTG +
Preference number: 4 (lower is better)
Translates to: ECLCIEHSHWSGVGSLSPLYWRP*QHRHGL
Trigger: CAGACCATGCCTGTGTTGCCAGGGCCTCCAGTACAG...AGGACTCAGGCTTCCCACCCCACTCCAATGTGAGTGCTCGATACACAAGCACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CCA 90 bp CCACCCATATTGCCATGTCCAAGGCAGATGGGAGGGGATAAGATGACATCTCTCGGTGAGACCTGTGGCTaGGCAGGGGATGGGGCATCA +
Preference number: 4 (lower is better)
Translates to: PPILPCPRQMGGDKMTSLGETCG*AGDGAS
Trigger: TGATGCCCCATCCCCTGCCCAGCCACAGGTCTCACC...GAGAGATGTCATCTTATCCCCTCCCATCTGCCTTGGACATGGCAATATGGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000420353.7
ENST00000456903.8
ENST00000548446.6
CDS-3UTR CCA 90 bp CCCATATTGCCATGTCCAAGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGTGGGCGGGCGAGCTCTaGCTGAGGACCTCTCCACCA +
Preference number: 4 (lower is better)
Translates to: PILPCPRQMGGDKMTSLLWAGEL*LRTSPP
Trigger: TGGTGGAGAGGTCCTCAGCCAGAGCTCGCCCGCCCA...CAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCTTGGACATGGCAATATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420353.7
ENST00000456903.8
ENST00000548446.6
CDS-3UTR CCA 90 bp ATATTGCCATGTCCAAGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGGCTATGAGGCTCCGGGGCTaGGAGGCCCCCAGCACAGGT +
Preference number: 4 (lower is better)
Translates to: ILPCPRQMGGDKMTSLLAMRLRG*EAPSTG
Trigger: ACCTGTGCTGGGGGCCTCCCAGCCCCGGAGCCTCAT...AGCCAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCTTGGACATGGCAATAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CCA 90 bp GACACCCACCATACACTCAGCTCCTTTCTGAAAGTGTCCTCCCTTAGGCCTCTAGCCACCACTGGGCACTaGGGAGACCCAGACCGAGTT +
Preference number: 4 (lower is better)
Translates to: DTHHTLSSFLKVSSLRPLATTGH*GDPDRV
Trigger: AACTCGGTCTGGGTCTCCCCAGTGCCCAGTGGTGGC...TAGAGGCCTAAGGGAGGACACTTTCAGAAAGGAGCTGAGTGTATGGTGGGTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420353.7
CDS-3UTR CCA 90 bp CCAGTCCCAGGAGATTGTGAGAACCAGCTCACAGGGATCATGCTGAATCAGGTGGTCAAAGGCCACCACTaGGCACTGGGGAGACCCAGA +
Preference number: 4 (lower is better)
Translates to: PVPGDCENQLTGIMLNQVVKGHH*ALGRPR
Trigger: TCTGGGTCTCCCCAGTGCCCAGTGGTGGCCTTTGAC...CACCTGATTCAGCATGATCCCTGTGAGCTGGTTCTCACAATCTCCTGGGACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420353.7
CDS-3UTR TCA 90 bp AGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGGCTCTTGGGCGGGCGAGCTCTCATCTTGGCTTCTaGTGGTATAGGGTGGCCAGA +
Preference number: 4 (lower is better)
Translates to: RQMGGDKMTSLLALGRASSHLGF*WYRVAR
Trigger: TCTGGCCACCCTATACCATCAGAAGCCAAGATGAGA...GCTCGCCCGCCCAAGAGCCAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420353.7
ENST00000456903.8
ENST00000548446.6
CDS-3UTR TCA 90 bp GGAAAGGAAGACAGTATGGTTAGGGAGAATAGAGCGAAGCCCCTGCCTCAGCCCAGAACCCGTTGGCTCTaGGCTTTCCTTGGGGCTTTC +
Preference number: 4 (lower is better)
Translates to: GKEDSMVRENRAKPLPQPRTRWL*AFLGAF
Trigger: GAAAGCCCCAAGGAAAGCTCAGAGCCAACGGGTTCT...GGGCTGAGGCAGGGGCTTCGCTCTATTCTCCCTAACCATACTGTCTTCCTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420353.7
CDS-3UTR TCA 90 bp ATATTGCCATGTCCAAGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGGCTGGGAGACCTGAGTCCTaGGTCCATGGGGTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: ILPCPRQMGGDKMTSLLAGRPES*VHGVAG
Trigger: CCCAGCCACCCCATGGACTCAGGACTCAGGTCTCCC...AGCCAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCTTGGACATGGCAATAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR TCA 90 bp GAGTGCTTGTGTATCGAGCACTCACATTGGAGTGGGGTGGGAAGCCTGAGTCCTGAATGGGGCAGAAAGTaGGCAGACCAGAAGACCTGG +
Preference number: 4 (lower is better)
Translates to: ECLCIEHSHWSGVGSLSPEWGRK*ADQKTW
Trigger: CCAGGTCTTCTGGTCTGCTCACTTTCTGCCCCATTC...AGGACTCAGGCTTCCCACCCCACTCCAATGTGAGTGCTCGATACACAAGCACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR TCA 90 bp AGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGGCTCTTGGGCGGGCGAGCGGTGCTAGAGGGCAGTaGATCAAGAAAGGAGCCAAA +
Preference number: 4 (lower is better)
Translates to: RQMGGDKMTSLLALGRASGARGQ*IKKGAK
Trigger: TTTGGCTCCTTTCTTGATTCACTGCCCTCTAGCACC...GCTCGCCCGCCCAAGAGCCAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR TCA 90 bp GGAAAGGAAGACAGTATGGTTAGGGAGAATAGAGCGAAGCCCCTGCCTCAGCCCGAGGAATGGGACAGCTaGAGCTTGGCTGGTCCTTAC +
Preference number: 4 (lower is better)
Translates to: GKEDSMVRENRAKPLPQPEEWDS*SLAGPY
Trigger: GTAAGGACCAGCCAAGCTTCAGCTGTCCCATTCCTC...GGGCTGAGGCAGGGGCTTCGCTCTATTCTCCCTAACCATACTGTCTTCCTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420353.7
CDS-3UTR GCA 90 bp CCAGTCCCAGGAGATTGTGAGAACCAGCTCACAGGGATCATGCTGAATCAGGTGCGCTCCAGAAAGCGCTaGCGTCGCTCATCTGGATCT +
Preference number: 4 (lower is better)
Translates to: PVPGDCENQLTGIMLNQVRSRKR*RRSSGS
Trigger: AGATCCAGATGAGCGACGGCAGCGCTTTCTGGAGCG...CACCTGATTCAGCATGATCCCTGTGAGCTGGTTCTCACAATCTCCTGGGACTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420353.7
CDS-3UTR GCA 90 bp CTCTGCTTGTGTGCCTCTTGGAGGCTACTCAGATTTGCAACACACAATTCCCCCGGCCACAGCTTCAGCTaGAGAGCGAACACTGAGGCC +
Preference number: 4 (lower is better)
Translates to: LCLCASWRLLRFATHNSPGHSFS*RANTEA
Trigger: GGCCTCAGTGTTCGCTCTGCAGCTGAAGCTGTGGCC...GGGGGAATTGTGTGTTGCAAATCTGAGTAGCCTCCAAGAGGCACACAAGCAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548446.6
CDS-3UTR GCA 90 bp GAGTGCTTGTGTATCGAGCACTCACATTGGAGTGGGGTGGGAAGCCTGAGTCCTGAACCTGGGGTCCTTTaGTGGGACCAGTTCTGCACT +
Preference number: 4 (lower is better)
Translates to: ECLCIEHSHWSGVGSLSPEPGVL*WDQFCT
Trigger: AGTGCAGAACTGGTCCCAGCAAAGGACCCCAGGTTC...AGGACTCAGGCTTCCCACCCCACTCCAATGTGAGTGCTCGATACACAAGCACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR GCA 90 bp AGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGGCTCTTGGGCGGGCGAGCGGTCCTGGTAGAAACTaGATAGTTCAGAGCCAAGGG +
Preference number: 4 (lower is better)
Translates to: RQMGGDKMTSLLALGRASGPGRN*IVQSQG
Trigger: CCCTTGGCTCTGAACTATGCAGTTTCTACCAGGACC...GCTCGCCCGCCCAAGAGCCAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CCA 90 bp CCAGTCCCAGGAGATTGTGAGAACCAGCTCACAGGGATCATGCTGAATCAGGTGTGCTGGATGAGAATCTaGCTCTGCTCTGGGCGGGCT +
Preference number: 4 (lower is better)
Translates to: PVPGDCENQLTGIMLNQVCWMRI*LCSGRA
Trigger: AGCCCGCCCAGAGCAGAGCCAGATTCTCATCCAGCA...CACCTGATTCAGCATGATCCCTGTGAGCTGGTTCTCACAATCTCCTGGGACTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420353.7
CDS-3UTR CCA 90 bp CCACCCATATTGCCATGTCCAAGGCAGATGGGAGGGGATAAGATGACATCTCTCCACAGCTTTCGCTTTTaGCGGCAGCGGGAGGCTGCA +
Preference number: 4 (lower is better)
Translates to: PPILPCPRQMGGDKMTSLHSFRF*RQREAA
Trigger: TGCAGCCTCCCGCTGCCGCCAAAAGCGAAAGCTGTG...GAGAGATGTCATCTTATCCCCTCCCATCTGCCTTGGACATGGCAATATGGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420353.7
ENST00000456903.8
ENST00000548446.6
CDS-3UTR CCA 90 bp GAGTGCTTGTGTATCGAGCACTCACATTGGAGTGGGGTGGGAAGCCTGAGTCCTCATCTGCCCGCAGACTaGGACTGTGGGGTCATGATT +
Preference number: 4 (lower is better)
Translates to: ECLCIEHSHWSGVGSLSPHLPAD*DCGVMI
Trigger: AATCATGACCCCACAGTCCCAGTCTGCGGGCAGATG...AGGACTCAGGCTTCCCACCCCACTCCAATGTGAGTGCTCGATACACAAGCACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CCA 90 bp GAGTGCTTGTGTATCGAGCACTCACATTGGAGTGGGGTGGGAAGCCTGAGTCCTCCTGGGGTCCTTTGCTaGGACCAGTTCTGCACTTTC +
Preference number: 4 (lower is better)
Translates to: ECLCIEHSHWSGVGSLSPPGVLC*DQFCTF
Trigger: GAAAGTGCAGAACTGGTCCCAGCAAAGGACCCCAGG...AGGACTCAGGCTTCCCACCCCACTCCAATGTGAGTGCTCGATACACAAGCACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CCA 90 bp AGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGGCTCTTGGGCGGGCGAGCGGGAGAGTGACCACATaGCTGGTAGCAATAACAAGG +
Preference number: 4 (lower is better)
Translates to: RQMGGDKMTSLLALGRASGRVTT*LVAITR
Trigger: CCTTGTTATTGCTACCAGCCATGTGGTCACTCTCCC...GCTCGCCCGCCCAAGAGCCAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
3UTR CAA 72 bp AGGCCACCACTGGGCACTGGGGAGACCCAGACCGAGTaGAGTTCCTTGATAAGATGGAGAGGTGTTGCTACA +
Preference number: 4 (lower is better)
Translates to: RPPLGTGETQTE*SSLIRWRGVAT
Trigger: TGTAGCAACACCTCTCCATCTTATCAAGGAACTCAACTCGGTCTGGGTCTCCCCAGTGCCCAGTGGTGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420353.7
CDS-3UTR TCA 90 bp GGGGTAGAACAAAGGAACTCGAGAGTCCCCTACATGACAGCCTCCAGGAGGGCTTCATGCTTGTGTTTATaGACTGCCAGGTGGTCCTCG +
Preference number: 4 (lower is better)
Translates to: GVEQRNSRVPYMTASRRASCLCL*TARWSS
Trigger: CGAGGACCACCTGGCAGTTCATAAACACAAGCATGA...AGCCCTCCTGGAGGCTGTCATGTAGGGGACTCTCGAGTTCCTTTGTTCTACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR TCA 90 bp CCACCCATATTGCCATGTCCAAGGCAGATGGGAGGGGATAAGATGACATCTCTCGCTATCAGGTGGGGATaGGTCTACCTCCACTGGCTC +
Preference number: 4 (lower is better)
Translates to: PPILPCPRQMGGDKMTSLAIRWG*VYLHWL
Trigger: GAGCCAGTGGAGGTAGACTCATCCCCACCTGATAGC...GAGAGATGTCATCTTATCCCCTCCCATCTGCCTTGGACATGGCAATATGGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420353.7
ENST00000456903.8
ENST00000548446.6
CDS-3UTR TCA 90 bp AGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGGCTCTTGGGCGGGCGAGCTTCCACAACCACCATTaGTTGAGGAGACTTGGTGAG +
Preference number: 4 (lower is better)
Translates to: RQMGGDKMTSLLALGRASFHNHH*LRRLGE
Trigger: CTCACCAAGTCTCCTCAATCAATGGTGGTTGTGGAA...GCTCGCCCGCCCAAGAGCCAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420353.7
ENST00000456903.8
ENST00000548446.6
CDS-3UTR TCA 90 bp AGGATGACCAGGCCTGGTCCTCTGTGCCTGGGGCTGGCAGTCAGGGCAACACAGCATTGCGTAGTAATGTaGCTTCATTACTCAGCTGAA +
Preference number: 4 (lower is better)
Translates to: RMTRPGPLCLGLAVRATQHCVVM*LHYSAE
Trigger: TTCAGCTGAGTAATGAAGTCACATTACTACGCAATG...CTGTGTTGCCCTGACTGCCAGCCCCAGGCACAGAGGACCAGGCCTGGTCATCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548446.6
CDS-3UTR TCA 90 bp GACACCCACCATACACTCAGCTCCTTTCTGAAAGTGTCCTCCCTTAGGCCTCTAGCTAGGGGCTGTTGCTaGGCTGTGCTGAATCACAGG +
Preference number: 4 (lower is better)
Translates to: DTHHTLSSFLKVSSLRPLARGCC*AVLNHR
Trigger: CCTGTGATTCAGCACAGCTCAGCAACAGCCCCTAGC...TAGAGGCCTAAGGGAGGACACTTTCAGAAAGGAGCTGAGTGTATGGTGGGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR TCA 90 bp GGGGTAGAACAAAGGAACTCGAGAGTCCCCTACATGACAGCCTCCAGGAGGGCTTGGGAGGGGATAAGATaGCATCTCTCTTGGCTCTTG +
Preference number: 4 (lower is better)
Translates to: GVEQRNSRVPYMTASRRAWEGIR*HLSWLL
Trigger: CAAGAGCCAAGAGAGATGTCATCTTATCCCCTCCCA...AGCCCTCCTGGAGGCTGTCATGTAGGGGACTCTCGAGTTCCTTTGTTCTACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR TCA 90 bp AGTGACACCTTCCATGATGTTTGGTTCTGGTCCAGATGGATCTGGAAGACAAAGCTGGGGGATGATCTATaGGGCTCCGGGGCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: SDTFHDVWFWSRWIWKTKLGDDL*GSGAGR
Trigger: CCTCCCAGCCCCGGAGCCTCATAGATCATCCCCCAG...CTTTGTCTTCCAGATCCATCTGGACCAGAACCAAACATCATGGAAGGTGTCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR TCA 90 bp CCACCCATATTGCCATGTCCAAGGCAGATGGGAGGGGATAAGATGACATCTCTCTGCATGGGGCAGGGGTaGTTGTTCGGACCATCTGGA +
Preference number: 4 (lower is better)
Translates to: PPILPCPRQMGGDKMTSLCMGQG*LFGPSG
Trigger: TCCAGATGGTCCGAACAATCACCCCTGCCCCATGCA...GAGAGATGTCATCTTATCCCCTCCCATCTGCCTTGGACATGGCAATATGGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR TCA 90 bp GACACCCACCATACACTCAGCTCCTTTCTGAAAGTGTCCTCCCTTAGGCCTCTACAGCTATGGGAGACCTaGGTCCTGAGTCCATGGGGT +
Preference number: 4 (lower is better)
Translates to: DTHHTLSSFLKVSSLRPLQLWET*VLSPWG
Trigger: ACCCCATGGACTCAGGACTCAGGTCTCCCATAGCTG...TAGAGGCCTAAGGGAGGACACTTTCAGAAAGGAGCTGAGTGTATGGTGGGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR TCA 90 bp CCACCCATATTGCCATGTCCAAGGCAGATGGGAGGGGATAAGATGACATCTCTCCAGCTATGGGAGACCTaGGTCCTGAGTCCATGGGGT +
Preference number: 4 (lower is better)
Translates to: PPILPCPRQMGGDKMTSLQLWET*VLSPWG
Trigger: ACCCCATGGACTCAGGACTCAGGTCTCCCATAGCTG...GAGAGATGTCATCTTATCCCCTCCCATCTGCCTTGGACATGGCAATATGGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR TCA 90 bp GAGTGCTTGTGTATCGAGCACTCACATTGGAGTGGGGTGGGAAGCCTGAGTCCTGAGGGACAAGAGAGATaGATTGCTCCCTCTGCAACC +
Preference number: 4 (lower is better)
Translates to: ECLCIEHSHWSGVGSLSPEGQER*IAPSAT
Trigger: GGTTGCAGAGGGAGCAATTCATCTCTCTTGTCCCTC...AGGACTCAGGCTTCCCACCCCACTCCAATGTGAGTGCTCGATACACAAGCACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR TCA 90 bp AGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGGCTCTTGGGCGGGCGAGCACAGAGAACATGGAGTaGCCAGTCTGCAAGGGAATA +
Preference number: 4 (lower is better)
Translates to: RQMGGDKMTSLLALGRASTENME*PVCKGI
Trigger: TATTCCCTTGCAGACTGGTCACTCCATGTTCTCTGT...GCTCGCCCGCCCAAGAGCCAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420353.7
CDS-3UTR GCA 90 bp CCCATATTGCCATGTCCAAGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGGGGCTGTCACCATGGTaGTGGCAGTACCCACCACCA +
Preference number: 4 (lower is better)
Translates to: PILPCPRQMGGDKMTSLLGLSPW*WQYPPP
Trigger: TGGTGGTGGGTACTGCCAGCACCATGGTGACAGCCC...CAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCTTGGACATGGCAATATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420353.7
ENST00000456903.8
ENST00000548446.6
CDS-3UTR GCA 90 bp CCACCCATATTGCCATGTCCAAGGCAGATGGGAGGGGATAAGATGACATCTCTCCGCTCCAGAAAGCGCTaGCGTCGCTCATCTGGATCT +
Preference number: 4 (lower is better)
Translates to: PPILPCPRQMGGDKMTSLRSRKR*RRSSGS
Trigger: AGATCCAGATGAGCGACGGCAGCGCTTTCTGGAGCG...GAGAGATGTCATCTTATCCCCTCCCATCTGCCTTGGACATGGCAATATGGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420353.7
ENST00000456903.8
ENST00000548446.6
CDS-3UTR GCA 90 bp AGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGGCTCTTGGGCGGGCGAGCGGGGTCATGATTACATaGGATTGTATCGGCATGCTC +
Preference number: 4 (lower is better)
Translates to: RQMGGDKMTSLLALGRASGVMIT*DCIGML
Trigger: GAGCATGCCGATACAATCGCATGTAATCATGACCCC...GCTCGCCCGCCCAAGAGCCAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420353.7
ENST00000456903.8
ENST00000548446.6
CDS-3UTR GCA 90 bp GGAAAGGAAGACAGTATGGTTAGGGAGAATAGAGCGAAGCCCCTGCCTCAGCCCCTGGATGTGGTAACCTaGGTCCTGACCATCTGCCAT +
Preference number: 4 (lower is better)
Translates to: GKEDSMVRENRAKPLPQPLDVVT*VLTICH
Trigger: ATGGCAGATGGTCAGGACGCAGGTTACCACATCCAG...GGGCTGAGGCAGGGGCTTCGCTCTATTCTCCCTAACCATACTGTCTTCCTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420353.7
CDS-3UTR GCA 90 bp GACACCCACCATACACTCAGCTCCTTTCTGAAAGTGTCCTCCCTTAGGCCTCTACTGTGGTTCTGGCAGTaGTCCTCACTGAGGTCCCGT +
Preference number: 4 (lower is better)
Translates to: DTHHTLSSFLKVSSLRPLLWFWQ*SSLRSR
Trigger: ACGGGACCTCAGTGAGGAGCACTGCCAGAACCACAG...TAGAGGCCTAAGGGAGGACACTTTCAGAAAGGAGCTGAGTGTATGGTGGGTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR GCA 90 bp AGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGGCTCTTGGGCGGGCGAGCAATAGCCTGCAGCACTaGATCCTCCTACCTGTCAAA +
Preference number: 4 (lower is better)
Translates to: RQMGGDKMTSLLALGRASNSLQH*ILLPVK
Trigger: TTTGACAGGTAGGAGGATGCAGTGCTGCAGGCTATT...GCTCGCCCGCCCAAGAGCCAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420353.7
CDS-3UTR CCA 90 bp GGAAAGGAAGACAGTATGGTTAGGGAGAATAGAGCGAAGCCCCTGCCTCAGCCCTGGGGAGGGAAGGGTTaGATGAAGTGGATCATAGCC +
Preference number: 4 (lower is better)
Translates to: GKEDSMVRENRAKPLPQPWGGKG*MKWIIA
Trigger: GGCTATGATCCACTTCATCCAACCCTTCCCTCCCCA...GGGCTGAGGCAGGGGCTTCGCTCTATTCTCCCTAACCATACTGTCTTCCTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420353.7
CDS-3UTR CCA 90 bp GGGGTAGAACAAAGGAACTCGAGAGTCCCCTACATGACAGCCTCCAGGAGGGCTTTGCCTGTTGGATGGTaGAGCCTGTGTGATGACAGA +
Preference number: 4 (lower is better)
Translates to: GVEQRNSRVPYMTASRRALPVGW*SLCDDR
Trigger: TCTGTCATCACACAGGCTCCACCATCCAACAGGCAA...AGCCCTCCTGGAGGCTGTCATGTAGGGGACTCTCGAGTTCCTTTGTTCTACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CCA 90 bp CCACCCATATTGCCATGTCCAAGGCAGATGGGAGGGGATAAGATGACATCTCTCAGACGGCATCTGTACTaGAGGCCCTGGCAACACAGG +
Preference number: 4 (lower is better)
Translates to: PPILPCPRQMGGDKMTSLRRHLY*RPWQHR
Trigger: CCTGTGTTGCCAGGGCCTCCAGTACAGATGCCGTCT...GAGAGATGTCATCTTATCCCCTCCCATCTGCCTTGGACATGGCAATATGGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420353.7
ENST00000456903.8
ENST00000548446.6
CDS-3UTR CCA 90 bp GACACCCACCATACACTCAGCTCCTTTCTGAAAGTGTCCTCCCTTAGGCCTCTAAATCTGGCTCTGCTCTaGGCGGGCTGTCACCATGGT +
Preference number: 4 (lower is better)
Translates to: DTHHTLSSFLKVSSLRPLNLALL*AGCHHG
Trigger: ACCATGGTGACAGCCCGCCCAGAGCAGAGCCAGATT...TAGAGGCCTAAGGGAGGACACTTTCAGAAAGGAGCTGAGTGTATGGTGGGTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CCA 90 bp CTCTGCTTGTGTGCCTCTTGGAGGCTACTCAGATTTGCAACACACAATTCCCCCAATCTGGCTCTGCTCTaGGCGGGCTGTCACCATGGT +
Preference number: 4 (lower is better)
Translates to: LCLCASWRLLRFATHNSPNLALL*AGCHHG
Trigger: ACCATGGTGACAGCCCGCCCAGAGCAGAGCCAGATT...GGGGGAATTGTGTGTTGCAAATCTGAGTAGCCTCCAAGAGGCACACAAGCAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548446.6
CDS-3UTR CCA 90 bp ATATTGCCATGTCCAAGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGGCTTGGCTGGGCAGGGGATaGGGCATCAGGGTGCTGGAT +
Preference number: 4 (lower is better)
Translates to: ILPCPRQMGGDKMTSLLAWLGRG*GIRVLD
Trigger: ATCCAGCACCCTGATGCCCCATCCCCTGCCCAGCCA...AGCCAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCTTGGACATGGCAATAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420353.7
ENST00000456903.8
ENST00000548446.6
CDS-3UTR CCA 90 bp AGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGGCTCTTGGGCGGGCGAGCAGTAGCTGTTTCAACTaGGCCACCTCATTGCGTAGT +
Preference number: 4 (lower is better)
Translates to: RQMGGDKMTSLLALGRASSSCFN*ATSLRS
Trigger: ACTACGCAATGAGGTGGCCCAGTTGAAACAGCTACT...GCTCGCCCGCCCAAGAGCCAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420353.7
ENST00000456903.8
ENST00000548446.6
CDS-3UTR CCA 90 bp GCTCTGGGACAACTGGAAGGGTTTCATACGGAAAGGCAATTAAAGCTGACCTATTGGGCGGGCGAGCTCTaGCTGAGGACCTCTCCACCA +
Preference number: 4 (lower is better)
Translates to: ALGQLEGFHTERQLKLTYWAGEL*LRTSPP
Trigger: TGGTGGAGAGGTCCTCAGCCAGAGCTCGCCCGCCCA...ATAGGTCAGCTTTAATTGCCTTTCCGTATGAAACCCTTCCAGTTGTCCCAGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CCA 90 bp AGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGGCTCTTGGGCGGGCGAGCGACGCTTCAAGATCCTaGAGCACTGCATGTAAAGAG +
Preference number: 4 (lower is better)
Translates to: RQMGGDKMTSLLALGRASDASRS*STACKE
Trigger: CTCTTTACATGCAGTGCTCCAGGATCTTGAAGCGTC...GCTCGCCCGCCCAAGAGCCAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CCA 90 bp CCCATATTGCCATGTCCAAGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGTCCCAGGCCAGAACCTaGGGTCCTTTGCTGGGACCA +
Preference number: 4 (lower is better)
Translates to: PILPCPRQMGGDKMTSLLSQART*GPLLGP
Trigger: TGGTCCCAGCAAAGGACCCCAGGTTCTGGCCTGGGA...CAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCTTGGACATGGCAATATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CCA 90 bp GAGTGCTTGTGTATCGAGCACTCACATTGGAGTGGGGTGGGAAGCCTGAGTCCTCTTGGCTTGCACAGATaGCAGAAAGTGGCTCTGGGA +
Preference number: 4 (lower is better)
Translates to: ECLCIEHSHWSGVGSLSPLGLHR*QKVALG
Trigger: TCCCAGAGCCACTTTCTGCCATCTGTGCAAGCCAAG...AGGACTCAGGCTTCCCACCCCACTCCAATGTGAGTGCTCGATACACAAGCACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CCA 90 bp GGGGTAGAACAAAGGAACTCGAGAGTCCCCTACATGACAGCCTCCAGGAGGGCTAACACAGGGACAGACTaGCAGGGCATGTATGCAGTT +
Preference number: 4 (lower is better)
Translates to: GVEQRNSRVPYMTASRRANTGTD*QGMYAV
Trigger: AACTGCATACATGCCCTGCCAGTCTGTCCCTGTGTT...AGCCCTCCTGGAGGCTGTCATGTAGGGGACTCTCGAGTTCCTTTGTTCTACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CCA 90 bp AGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGGCTCTTGGGCGGGCGAGCTGCTTGTGTGCCTCTTaGAGGCTACTCAGATTTGCA +
Preference number: 4 (lower is better)
Translates to: RQMGGDKMTSLLALGRASCLCAS*RLLRFA
Trigger: TGCAAATCTGAGTAGCCTCCAAGAGGCACACAAGCA...GCTCGCCCGCCCAAGAGCCAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548446.6
CDS-3UTR CCA 90 bp ATATTGCCATGTCCAAGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGGCTCTGGTCCTCTGTGCCTaGGGCTGGCAGTCAGGGCAA +
Preference number: 4 (lower is better)
Translates to: ILPCPRQMGGDKMTSLLALVLCA*GWQSGQ
Trigger: TTGCCCTGACTGCCAGCCCCAGGCACAGAGGACCAG...AGCCAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCTTGGACATGGCAATAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548446.6
3UTR CAA 72 bp GTCTGTTTGGTGGTTCAGGCTGTACATAGGGCACGGTaGGGGTTAAGCACTCCATCTACCAGGATGGGTGGT +
Preference number: 4 (lower is better)
Translates to: VCLVVQAVHRAR*GLSTPSTRMGG
Trigger: ACCACCCATCCTGGTAGATGGAGTGCTTAACCCCAACCGTGCCCTATGTACAGCCTGAACCACCAAACAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR TCA 90 bp CCACCCATATTGCCATGTCCAAGGCAGATGGGAGGGGATAAGATGACATCTCTCATCTGCAATGATGACTaGGTCAGTTCGGGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: PPILPCPRQMGGDKMTSLICNDD*VSSGWA
Trigger: GGCCCAGCCCGAACTGACTCAGTCATCATTGCAGAT...GAGAGATGTCATCTTATCCCCTCCCATCTGCCTTGGACATGGCAATATGGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420353.7
ENST00000456903.8
ENST00000548446.6
CDS-3UTR TCA 90 bp GAGTGCTTGTGTATCGAGCACTCACATTGGAGTGGGGTGGGAAGCCTGAGTCCTGGGACTGTGGGGTCATaGTTACATGCGATTGTATCG +
Preference number: 4 (lower is better)
Translates to: ECLCIEHSHWSGVGSLSPGTVGS*LHAIVS
Trigger: CGATACAATCGCATGTAATCATGACCCCACAGTCCC...AGGACTCAGGCTTCCCACCCCACTCCAATGTGAGTGCTCGATACACAAGCACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR TCA 90 bp GAGTGCTTGTGTATCGAGCACTCACATTGGAGTGGGGTGGGAAGCCTGAGTCCTTCAGCATCTTGGCTATaGCGCTTCAAGATCCTGGAG +
Preference number: 4 (lower is better)
Translates to: ECLCIEHSHWSGVGSLSPSASWL*RFKILE
Trigger: CTCCAGGATCTTGAAGCGTCATAGCCAAGATGCTGA...AGGACTCAGGCTTCCCACCCCACTCCAATGTGAGTGCTCGATACACAAGCACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR TCA 90 bp GAGTGCTTGTGTATCGAGCACTCACATTGGAGTGGGGTGGGAAGCCTGAGTCCTTCACAGGGATCATGCTaGATCAGGTGGAGGGGAAAA +
Preference number: 4 (lower is better)
Translates to: ECLCIEHSHWSGVGSLSPSQGSC*IRWRGK
Trigger: TTTTCCCCTCCACCTGATTCAGCATGATCCCTGTGA...AGGACTCAGGCTTCCCACCCCACTCCAATGTGAGTGCTCGATACACAAGCACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420353.7
CDS-3UTR GCA 90 bp CCCATATTGCCATGTCCAAGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGATGAGAATCTGGCTCTaGTCTGGGCGGGCTGTCACC +
Preference number: 4 (lower is better)
Translates to: PILPCPRQMGGDKMTSLLMRIWL*SGRAVT
Trigger: GGTGACAGCCCGCCCAGAGCAGAGCCAGATTCTCAT...CAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCTTGGACATGGCAATATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420353.7
ENST00000456903.8
ENST00000548446.6
CDS-3UTR GCA 90 bp CCCATATTGCCATGTCCAAGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGAGAGGAGGCATCATCTaGCCGCAGACTGGGACTGTG +
Preference number: 4 (lower is better)
Translates to: PILPCPRQMGGDKMTSLLRGGII*PQTGTV
Trigger: CACAGTCCCAGTCTGCGGGCAGATGATGCCTCCTCT...CAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCTTGGACATGGCAATATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420353.7
ENST00000456903.8
ENST00000548446.6
CDS-3UTR GCA 90 bp GGGGTAGAACAAAGGAACTCGAGAGTCCCCTACATGACAGCCTCCAGGAGGGCTAGGACATTCTTGGCTTaGACAGATGGCAGAAAGTGG +
Preference number: 4 (lower is better)
Translates to: GVEQRNSRVPYMTASRRARTFLA*TDGRKW
Trigger: CCACTTTCTGCCATCTGTGCAAGCCAAGAATGTCCT...AGCCCTCCTGGAGGCTGTCATGTAGGGGACTCTCGAGTTCCTTTGTTCTACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR GCA 90 bp GAGTGCTTGTGTATCGAGCACTCACATTGGAGTGGGGTGGGAAGCCTGAGTCCTGGGGTTCTGACCTGCTaGTTCCTTATTTCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: ECLCIEHSHWSGVGSLSPGVLTC*FLISVP
Trigger: TGGCACTGAAATAAGGAAGCAGCAGGTCAGAACCCC...AGGACTCAGGCTTCCCACCCCACTCCAATGTGAGTGCTCGATACACAAGCACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR GCA 90 bp GAGTGCTTGTGTATCGAGCACTCACATTGGAGTGGGGTGGGAAGCCTGAGTCCTATAAGGCACAATATATaGCAGGGCAAGGGAGGGAGG +
Preference number: 4 (lower is better)
Translates to: ECLCIEHSHWSGVGSLSPIRHNI*QGKGGR
Trigger: CCTCCCTCCCTTGCCCTGGCATATATTGTGCCTTAT...AGGACTCAGGCTTCCCACCCCACTCCAATGTGAGTGCTCGATACACAAGCACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420353.7
CDS-3UTR CCA 90 bp CCACCCATATTGCCATGTCCAAGGCAGATGGGAGGGGATAAGATGACATCTCTCCTTCTCCTTCAGTGGTaGGGAACAGGGACTAGAGGC +
Preference number: 4 (lower is better)
Translates to: PPILPCPRQMGGDKMTSLLLLQW*GTGTRG
Trigger: GCCTCTAGTCCCTGTTCCCCACCACTGAAGGAGAAG...GAGAGATGTCATCTTATCCCCTCCCATCTGCCTTGGACATGGCAATATGGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420353.7
ENST00000456903.8
ENST00000548446.6
CDS-3UTR CCA 90 bp GACACCCACCATACACTCAGCTCCTTTCTGAAAGTGTCCTCCCTTAGGCCTCTACTTCTCCTTCAGTGGTaGGGAACAGGGACTAGAGGC +
Preference number: 4 (lower is better)
Translates to: DTHHTLSSFLKVSSLRPLLLLQW*GTGTRG
Trigger: GCCTCTAGTCCCTGTTCCCCACCACTGAAGGAGAAG...TAGAGGCCTAAGGGAGGACACTTTCAGAAAGGAGCTGAGTGTATGGTGGGTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CCA 90 bp CCCATATTGCCATGTCCAAGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGCTGTACTGGAGGCCCTaGCAACACAGGCATGGTCTG +
Preference number: 4 (lower is better)
Translates to: PILPCPRQMGGDKMTSLLLYWRP*QHRHGL
Trigger: CAGACCATGCCTGTGTTGCCAGGGCCTCCAGTACAG...CAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCTTGGACATGGCAATATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420353.7
ENST00000456903.8
ENST00000548446.6
CDS-3UTR CCA 90 bp CCAGTCCCAGGAGATTGTGAGAACCAGCTCACAGGGATCATGCTGAATCAGGTGGGATACCAGGAATGTTaGGCACCATGGACACAGGTC +
Preference number: 4 (lower is better)
Translates to: PVPGDCENQLTGIMLNQVGYQEC*APWTQV
Trigger: GACCTGTGTCCATGGTGCCCAACATTCCTGGTATCC...CACCTGATTCAGCATGATCCCTGTGAGCTGGTTCTCACAATCTCCTGGGACTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420353.7
CDS-3UTR CCA 90 bp GACACCCACCATACACTCAGCTCCTTTCTGAAAGTGTCCTCCCTTAGGCCTCTAGCCACTACTGTTAACTaGTGGGCCAGGGATACCAGG +
Preference number: 4 (lower is better)
Translates to: DTHHTLSSFLKVSSLRPLATTVN*WARDTR
Trigger: CCTGGTATCCCTGGCCCACCAGTTAACAGTAGTGGC...TAGAGGCCTAAGGGAGGACACTTTCAGAAAGGAGCTGAGTGTATGGTGGGTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CCA 90 bp CCACCCATATTGCCATGTCCAAGGCAGATGGGAGGGGATAAGATGACATCTCTCGCCACTACTGTTAACTaGTGGGCCAGGGATACCAGG +
Preference number: 4 (lower is better)
Translates to: PPILPCPRQMGGDKMTSLATTVN*WARDTR
Trigger: CCTGGTATCCCTGGCCCACCAGTTAACAGTAGTGGC...GAGAGATGTCATCTTATCCCCTCCCATCTGCCTTGGACATGGCAATATGGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420353.7
ENST00000456903.8
ENST00000548446.6
CDS-3UTR CCA 90 bp CCACCCATATTGCCATGTCCAAGGCAGATGGGAGGGGATAAGATGACATCTCTCCTGTCACCATGGTGCTaGCAGTACCCACCACCATTC +
Preference number: 4 (lower is better)
Translates to: PPILPCPRQMGGDKMTSLLSPWC*QYPPPF
Trigger: GAATGGTGGTGGGTACTGCCAGCACCATGGTGACAG...GAGAGATGTCATCTTATCCCCTCCCATCTGCCTTGGACATGGCAATATGGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420353.7
ENST00000456903.8
ENST00000548446.6
CDS-3UTR CCA 90 bp CCCATATTGCCATGTCCAAGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGAATCTGGCTCTGCTCTaGGCGGGCTGTCACCATGGT +
Preference number: 4 (lower is better)
Translates to: PILPCPRQMGGDKMTSLLNLALL*AGCHHG
Trigger: ACCATGGTGACAGCCCGCCCAGAGCAGAGCCAGATT...CAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCTTGGACATGGCAATATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420353.7
ENST00000456903.8
ENST00000548446.6
CDS-3UTR CCA 90 bp CCCACCACTACACTAAAGTCAAGGGACAAAATGAGGTACCCAAATAGCTCTGCAGGTGAGACCTGTGGCTaGGCAGGGGATGGGGCATCA +
Preference number: 4 (lower is better)
Translates to: PTTTLKSRDKMRYPNSSAGETCG*AGDGAS
Trigger: TGATGCCCCATCCCCTGCCCAGCCACAGGTCTCACC...TGCAGAGCTATTTGGGTACCTCATTTTGTCCCTTGACTTTAGTGTAGTGGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CCA 90 bp AGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGGCTCTTGGGCGGGCGAGCATCTGGAAAGGCCTTTaGCTGTGGATGCATCAGAAA +
Preference number: 4 (lower is better)
Translates to: RQMGGDKMTSLLALGRASIWKGL*LWMHQK
Trigger: TTTCTGATGCATCCACAGCCAAAGGCCTTTCCAGAT...GCTCGCCCGCCCAAGAGCCAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CCA 90 bp GGAAAGGAAGACAGTATGGTTAGGGAGAATAGAGCGAAGCCCCTGCCTCAGCCCAGGGCCTATTCCTGTTaGGTACCTGATGGTAGAGGA +
Preference number: 4 (lower is better)
Translates to: GKEDSMVRENRAKPLPQPRAYSC*VPDGRG
Trigger: TCCTCTACCATCAGGTACCCAACAGGAATAGGCCCT...GGGCTGAGGCAGGGGCTTCGCTCTATTCTCCCTAACCATACTGTCTTCCTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420353.7
CDS-3UTR CCA 90 bp CCCATATTGCCATGTCCAAGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGGCACTCACATTGGAGTaGGGTGGGAAGCCTGAGTCC +
Preference number: 4 (lower is better)
Translates to: PILPCPRQMGGDKMTSLLALTLE*GGKPES
Trigger: GGACTCAGGCTTCCCACCCCACTCCAATGTGAGTGC...CAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCTTGGACATGGCAATATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
3UTR CAA 72 bp CAGCTAGCTAGAGTGCTTGTGTATCGAGCACTCACATaGGAGTGGGGTGGGAAGCCTGAGTCCTGTATTCAC +
Preference number: 4 (lower is better)
Translates to: QLARVLVYRALT*EWGGKPESCIH
Trigger: GTGAATACAGGACTCAGGCTTCCCACCCCACTCCAATGTGAGTGCTCGATACACAAGCACTCTAGCTAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR TCA 90 bp CCCATATTGCCATGTCCAAGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGAGAACCCGTTGGCTCTaGGCTTTCCTTGGGGCTTTC +
Preference number: 4 (lower is better)
Translates to: PILPCPRQMGGDKMTSLLRTRWL*AFLGAF
Trigger: GAAAGCCCCAAGGAAAGCTCAGAGCCAACGGGTTCT...CAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCTTGGACATGGCAATATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420353.7
ENST00000456903.8
ENST00000548446.6
CDS-3UTR TCA 90 bp ATATTGCCATGTCCAAGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGGCTGCTAGGGGCTGTTGCTaGGCTGTGCTGAATCACAGG +
Preference number: 4 (lower is better)
Translates to: ILPCPRQMGGDKMTSLLAARGCC*AVLNHR
Trigger: CCTGTGATTCAGCACAGCTCAGCAACAGCCCCTAGC...AGCCAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCTTGGACATGGCAATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420353.7
ENST00000456903.8
ENST00000548446.6
CDS-3UTR TCA 90 bp AGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGGCTCTTGGGCGGGCGAGCGCAGGAGCAGAAAAATaGCCAAAGATGACAATATGC +
Preference number: 4 (lower is better)
Translates to: RQMGGDKMTSLLALGRASAGAEK*PKMTIC
Trigger: GCATATTGTCATCTTTGGTCATTTTTCTGCTCCTGC...GCTCGCCCGCCCAAGAGCCAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR TCA 90 bp CCAGTCCCAGGAGATTGTGAGAACCAGCTCACAGGGATCATGCTGAATCAGGTGGGTGATGGGCACTTGTaGACAGAAGACTCTAGCTCA +
Preference number: 4 (lower is better)
Translates to: PVPGDCENQLTGIMLNQVGDGHL*TEDSSS
Trigger: TGAGCTAGAGTCTTCTGTTCACAAGTGCCCATCACC...CACCTGATTCAGCATGATCCCTGTGAGCTGGTTCTCACAATCTCCTGGGACTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420353.7
CDS-3UTR TCA 90 bp CCACCCATATTGCCATGTCCAAGGCAGATGGGAGGGGATAAGATGACATCTCTCAGAGCCAAGGGGAGATaGGAAGCCTTAACGTGGAAG +
Preference number: 4 (lower is better)
Translates to: PPILPCPRQMGGDKMTSLRAKGR*EALTWK
Trigger: CTTCCACGTTAAGGCTTCTCATCTCCCCTTGGCTCT...GAGAGATGTCATCTTATCCCCTCCCATCTGCCTTGGACATGGCAATATGGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR TCA 90 bp CCACCCATATTGCCATGTCCAAGGCAGATGGGAGGGGATAAGATGACATCTCTCACAGGCCTCTGGCTCTaGATTGCTTCCTATGGTCCT +
Preference number: 4 (lower is better)
Translates to: PPILPCPRQMGGDKMTSLTGLWL*IASYGP
Trigger: AGGACCATAGGAAGCAATTCAGAGCCAGAGGCCTGT...GAGAGATGTCATCTTATCCCCTCCCATCTGCCTTGGACATGGCAATATGGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR TCA 90 bp GACACCCACCATACACTCAGCTCCTTTCTGAAAGTGTCCTCCCTTAGGCCTCTACTAAAGGGGAAGTCCTaGGCACAAGTTACGGCTGTG +
Preference number: 4 (lower is better)
Translates to: DTHHTLSSFLKVSSLRPLLKGKS*AQVTAV
Trigger: CACAGCCGTAACTTGTGCTCAGGACTTCCCCTTTAG...TAGAGGCCTAAGGGAGGACACTTTCAGAAAGGAGCTGAGTGTATGGTGGGTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR TCA 90 bp GGAAAGGAAGACAGTATGGTTAGGGAGAATAGAGCGAAGCCCCTGCCTCAGCCCCTATCTAGGGGGTTCTaGCCTGCTGCTTCCTTATTT +
Preference number: 4 (lower is better)
Translates to: GKEDSMVRENRAKPLPQPLSRGF*PAASLF
Trigger: AAATAAGGAAGCAGCAGGTCAGAACCCCCTAGATAG...GGGCTGAGGCAGGGGCTTCGCTCTATTCTCCCTAACCATACTGTCTTCCTTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000420353.7
CDS-3UTR GCA 90 bp AGTGTAGCTGAGAAGTCTGATCAGCTCAGAAAAGAGTGGAATTTGGCAACAAATCCGTTGCCTCCCGCCTaGCCGCGCTCGGTCCTACAA +
Preference number: 4 (lower is better)
Translates to: SVAEKSDQLRKEWNLATNPLPPA*PRSVLQ
Trigger: TTGTAGGACCGAGCGCGGGCAGGCGGGAGGCAACGG...ATTTGTTGCCAAATTCCACTCTTTTCTGAGCTGATCAGACTTCTCAGCTACACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591397.1
CDS-3UTR GCA 90 bp CCAGTCCCAGGAGATTGTGAGAACCAGCTCACAGGGATCATGCTGAATCAGGTGGCGATTGTATCGGCATaGTCAGTTCTGTCCTTTGGC +
Preference number: 4 (lower is better)
Translates to: PVPGDCENQLTGIMLNQVAIVSA*SVLSFG
Trigger: GCCAAAGGACAGAACTGAGCATGCCGATACAATCGC...CACCTGATTCAGCATGATCCCTGTGAGCTGGTTCTCACAATCTCCTGGGACTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420353.7
CDS-3UTR GCA 90 bp GGAAAGGAAGACAGTATGGTTAGGGAGAATAGAGCGAAGCCCCTGCCTCAGCCCGGGGTCATGATTACATaGGATTGTATCGGCATGCTC +
Preference number: 4 (lower is better)
Translates to: GKEDSMVRENRAKPLPQPGVMIT*DCIGML
Trigger: GAGCATGCCGATACAATCGCATGTAATCATGACCCC...GGGCTGAGGCAGGGGCTTCGCTCTATTCTCCCTAACCATACTGTCTTCCTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420353.7
CDS-3UTR GCA 90 bp GAGTGCTTGTGTATCGAGCACTCACATTGGAGTGGGGTGGGAAGCCTGAGTCCTGGGGTCATGATTACATaGGATTGTATCGGCATGCTC +
Preference number: 4 (lower is better)
Translates to: ECLCIEHSHWSGVGSLSPGVMIT*DCIGML
Trigger: GAGCATGCCGATACAATCGCATGTAATCATGACCCC...AGGACTCAGGCTTCCCACCCCACTCCAATGTGAGTGCTCGATACACAAGCACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR GCA 90 bp GACACCCACCATACACTCAGCTCCTTTCTGAAAGTGTCCTCCCTTAGGCCTCTATGCTGGGACCAGTTCTaGACTTTCCCTCTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: DTHHTLSSFLKVSSLRPLCWDQF*TFPLLF
Trigger: GAAGAGGAGAGGGAAAGTGCAGAACTGGTCCCAGCA...TAGAGGCCTAAGGGAGGACACTTTCAGAAAGGAGCTGAGTGTATGGTGGGTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR GCA 90 bp AGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGGCTCTTGGGCGGGCGAGCATGAATTGCTCCCTCTaGAACCCAACTCTTCAAAGT +
Preference number: 4 (lower is better)
Translates to: RQMGGDKMTSLLALGRASMNCSL*NPTLQS
Trigger: ACTTTGAAGAGTTGGGTTGCAGAGGGAGCAATTCAT...GCTCGCCCGCCCAAGAGCCAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR GCA 90 bp CCAGTCCCAGGAGATTGTGAGAACCAGCTCACAGGGATCATGCTGAATCAGGTGAGCTCATCTCCTCCCTaGCTGAAAGGTGTGTGTGTT +
Preference number: 4 (lower is better)
Translates to: PVPGDCENQLTGIMLNQVSSSPP*LKGVCV
Trigger: AACACACACACCTTTCAGGCAGGGAGGAGATGAGCT...CACCTGATTCAGCATGATCCCTGTGAGCTGGTTCTCACAATCTCCTGGGACTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420353.7
CDS-3UTR GCA 90 bp CCCATATTGCCATGTCCAAGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGACACAGCCCATCCTCTaGTTGTGTGCCTCTTGGAGG +
Preference number: 4 (lower is better)
Translates to: PILPCPRQMGGDKMTSLLTQPIL*LCASWR
Trigger: CCTCCAAGAGGCACACAAGCAGAGGATGGGCTGTGT...CAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCTTGGACATGGCAATATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548446.6
CDS-3UTR CCA 90 bp GGAAAGGAAGACAGTATGGTTAGGGAGAATAGAGCGAAGCCCCTGCCTCAGCCCGATCAGAACAGGCTTTaGGGTAACCTCCTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: GKEDSMVRENRAKPLPQPDQNRL*GNLLLL
Trigger: AAGGAGAAGGAGGTTACCCCAAAGCCTGTTCTGATC...GGGCTGAGGCAGGGGCTTCGCTCTATTCTCCCTAACCATACTGTCTTCCTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420353.7
CDS-3UTR CCA 90 bp GAGTGCTTGTGTATCGAGCACTCACATTGGAGTGGGGTGGGAAGCCTGAGTCCTAAGGGTTGGATGAAGTaGATCATAGCCCAAGTGGAG +
Preference number: 4 (lower is better)
Translates to: ECLCIEHSHWSGVGSLSPKGWMK*IIAQVE
Trigger: CTCCACTTGGGCTATGATCCACTTCATCCAACCCTT...AGGACTCAGGCTTCCCACCCCACTCCAATGTGAGTGCTCGATACACAAGCACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CCA 90 bp ATATTGCCATGTCCAAGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGGCTAGACGGCATCTGTACTaGAGGCCCTGGCAACACAGG +
Preference number: 4 (lower is better)
Translates to: ILPCPRQMGGDKMTSLLARRHLY*RPWQHR
Trigger: CCTGTGTTGCCAGGGCCTCCAGTACAGATGCCGTCT...AGCCAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCTTGGACATGGCAATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420353.7
ENST00000456903.8
ENST00000548446.6
CDS-3UTR CCA 90 bp GAGTGCTTGTGTATCGAGCACTCACATTGGAGTGGGGTGGGAAGCCTGAGTCCTACTACTGTTAACTGGTaGGCCAGGGATACCAGGAAT +
Preference number: 4 (lower is better)
Translates to: ECLCIEHSHWSGVGSLSPTTVNW*ARDTRN
Trigger: ATTCCTGGTATCCCTGGCCCACCAGTTAACAGTAGT...AGGACTCAGGCTTCCCACCCCACTCCAATGTGAGTGCTCGATACACAAGCACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CCA 90 bp CCAGTCCCAGGAGATTGTGAGAACCAGCTCACAGGGATCATGCTGAATCAGGTGTCTGATGGTATAGGGTaGCCAGAGGGAGAAATGGAG +
Preference number: 4 (lower is better)
Translates to: PVPGDCENQLTGIMLNQVSDGIG*PEGEME
Trigger: CTCCATTTCTCCCTCTGGCCACCCTATACCATCAGA...CACCTGATTCAGCATGATCCCTGTGAGCTGGTTCTCACAATCTCCTGGGACTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420353.7
CDS-3UTR CCA 90 bp GGAAAGGAAGACAGTATGGTTAGGGAGAATAGAGCGAAGCCCCTGCCTCAGCCCCTTGGTGAGTTAGGGTaGCTTTCAGTCTCATCTTGG +
Preference number: 4 (lower is better)
Translates to: GKEDSMVRENRAKPLPQPLGELG*LSVSSW
Trigger: CCAAGATGAGACTGAAAGCCACCCTAACTCACCAAG...GGGCTGAGGCAGGGGCTTCGCTCTATTCTCCCTAACCATACTGTCTTCCTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420353.7
CDS-3UTR CCA 90 bp CCCATATTGCCATGTCCAAGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGCTGTCACCATGGTGCTaGCAGTACCCACCACCATTC +
Preference number: 4 (lower is better)
Translates to: PILPCPRQMGGDKMTSLLLSPWC*QYPPPF
Trigger: GAATGGTGGTGGGTACTGCCAGCACCATGGTGACAG...CAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCTTGGACATGGCAATATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420353.7
ENST00000456903.8
ENST00000548446.6
CDS-3UTR CCA 90 bp CTCTGCTTGTGTGCCTCTTGGAGGCTACTCAGATTTGCAACACACAATTCCCCCCTGCCGTCGCTCATCTaGATCTTCATCTACTGTGCG +
Preference number: 4 (lower is better)
Translates to: LCLCASWRLLRFATHNSPLPSLI*IFIYCA
Trigger: CGCACAGTAGATGAAGATCCAGATGAGCGACGGCAG...GGGGGAATTGTGTGTTGCAAATCTGAGTAGCCTCCAAGAGGCACACAAGCAGAG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000548446.6
CDS-3UTR CCA 90 bp ATATTGCCATGTCCAAGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGGCTGGCTTAGTGGGGTGGTaGGAAAGACCCCACCACTAC +
Preference number: 4 (lower is better)
Translates to: ILPCPRQMGGDKMTSLLAGLVGW*ERPHHY
Trigger: GTAGTGGTGGGGTCTTTCCCACCACCCCACTAAGCC...AGCCAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCTTGGACATGGCAATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CCA 90 bp GAGTGCTTGTGTATCGAGCACTCACATTGGAGTGGGGTGGGAAGCCTGAGTCCTTGGCTCTGGGACAACTaGAAGGGTTTCATACGGAAA +
Preference number: 4 (lower is better)
Translates to: ECLCIEHSHWSGVGSLSPWLWDN*KGFIRK
Trigger: TTTCCGTATGAAACCCTTCCAGTTGTCCCAGAGCCA...AGGACTCAGGCTTCCCACCCCACTCCAATGTGAGTGCTCGATACACAAGCACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CCA 90 bp AGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGGCTCTTGGGCGGGCGAGCTGGTTCTGGTCCAGATaGATCTGGAAGACAAAGATT +
Preference number: 4 (lower is better)
Translates to: RQMGGDKMTSLLALGRASWFWSR*IWKTKI
Trigger: AATCTTTGTCTTCCAGATCCATCTGGACCAGAACCA...GCTCGCCCGCCCAAGAGCCAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CCA 90 bp CCCATATTGCCATGTCCAAGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGGTGGCCTTGGGTACGTaGCAGCTAGCTAGAGTGCTT +
Preference number: 4 (lower is better)
Translates to: PILPCPRQMGGDKMTSLLVALGT*QLARVL
Trigger: AAGCACTCTAGCTAGCTGCCACGTACCCAAGGCCAC...CAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCTTGGACATGGCAATATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CCA 90 bp CCAGTCCCAGGAGATTGTGAGAACCAGCTCACAGGGATCATGCTGAATCAGGTGGGGATAACTGCTAAGTaGCAAGGGGGAAAGGAAGAC +
Preference number: 4 (lower is better)
Translates to: PVPGDCENQLTGIMLNQVGITAK*QGGKED
Trigger: GTCTTCCTTTCCCCCTTGCCACTTAGCAGTTATCCC...CACCTGATTCAGCATGATCCCTGTGAGCTGGTTCTCACAATCTCCTGGGACTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420353.7
CDS-3UTR TCA 90 bp CCACCCATATTGCCATGTCCAAGGCAGATGGGAGGGGATAAGATGACATCTCTCTCATGCTTGTGTTTATaGACTGCCAGGTGGTCCTCG +
Preference number: 4 (lower is better)
Translates to: PPILPCPRQMGGDKMTSLSCLCL*TARWSS
Trigger: CGAGGACCACCTGGCAGTTCATAAACACAAGCATGA...GAGAGATGTCATCTTATCCCCTCCCATCTGCCTTGGACATGGCAATATGGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420353.7
ENST00000456903.8
ENST00000548446.6
CDS-3UTR TCA 90 bp CCACCCATATTGCCATGTCCAAGGCAGATGGGAGGGGATAAGATGACATCTCTCTCTCATCTTGGCTTCTaGTGGTATAGGGTGGCCAGA +
Preference number: 4 (lower is better)
Translates to: PPILPCPRQMGGDKMTSLSHLGF*WYRVAR
Trigger: TCTGGCCACCCTATACCATCAGAAGCCAAGATGAGA...GAGAGATGTCATCTTATCCCCTCCCATCTGCCTTGGACATGGCAATATGGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420353.7
ENST00000456903.8
ENST00000548446.6
CDS-3UTR TCA 90 bp AGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGGCTCTTGGGCGGGCGAGCCATTGCGTAGTAATGTaGCTTCATTACTCAGCTGAA +
Preference number: 4 (lower is better)
Translates to: RQMGGDKMTSLLALGRASHCVVM*LHYSAE
Trigger: TTCAGCTGAGTAATGAAGTCACATTACTACGCAATG...GCTCGCCCGCCCAAGAGCCAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420353.7
ENST00000456903.8
ENST00000548446.6
CDS-3UTR TCA 90 bp CCACCCATATTGCCATGTCCAAGGCAGATGGGAGGGGATAAGATGACATCTCTCGGGACTGTGGGGTCATaGTTACATGCGATTGTATCG +
Preference number: 4 (lower is better)
Translates to: PPILPCPRQMGGDKMTSLGTVGS*LHAIVS
Trigger: CGATACAATCGCATGTAATCATGACCCCACAGTCCC...GAGAGATGTCATCTTATCCCCTCCCATCTGCCTTGGACATGGCAATATGGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420353.7
ENST00000456903.8
ENST00000548446.6
CDS-3UTR TCA 90 bp CCACCCATATTGCCATGTCCAAGGCAGATGGGAGGGGATAAGATGACATCTCTCTGGGAGGGGATAAGATaGCATCTCTCTTGGCTCTTG +
Preference number: 4 (lower is better)
Translates to: PPILPCPRQMGGDKMTSLWEGIR*HLSWLL
Trigger: CAAGAGCCAAGAGAGATGTCATCTTATCCCCTCCCA...GAGAGATGTCATCTTATCCCCTCCCATCTGCCTTGGACATGGCAATATGGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420353.7
ENST00000456903.8
ENST00000548446.6
CDS-3UTR TCA 90 bp CCCACCACTACACTAAAGTCAAGGGACAAAATGAGGTACCCAAATAGCTCTGCAGGCAGTGCTCCTCACTaGGGTCCCGTACACATCTTC +
Preference number: 4 (lower is better)
Translates to: PTTTLKSRDKMRYPNSSAGSAPH*GPVHIF
Trigger: GAAGATGTGTACGGGACCTCAGTGAGGAGCACTGCC...TGCAGAGCTATTTGGGTACCTCATTTTGTCCCTTGACTTTAGTGTAGTGGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR TCA 90 bp GCTCTGGGACAACTGGAAGGGTTTCATACGGAAAGGCAATTAAAGCTGACCTATGGCAGTGCTCCTCACTaGGGTCCCGTACACATCTTC +
Preference number: 4 (lower is better)
Translates to: ALGQLEGFHTERQLKLTYGSAPH*GPVHIF
Trigger: GAAGATGTGTACGGGACCTCAGTGAGGAGCACTGCC...ATAGGTCAGCTTTAATTGCCTTTCCGTATGAAACCCTTCCAGTTGTCCCAGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR TCA 90 bp CCCATATTGCCATGTCCAAGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGCACTCAGCTCCTTTCTaGAAGTGTCCTCCCTTAGGC +
Preference number: 4 (lower is better)
Translates to: PILPCPRQMGGDKMTSLLHSAPF*KCPPLG
Trigger: GCCTAAGGGAGGACACTTTCAGAAAGGAGCTGAGTG...CAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCTTGGACATGGCAATATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR TCA 90 bp GACACCCACCATACACTCAGCTCCTTTCTGAAAGTGTCCTCCCTTAGGCCTCTAACAGGGATAGAGAAGTaGGCGAGAGGAGGTTCAGTT +
Preference number: 4 (lower is better)
Translates to: DTHHTLSSFLKVSSLRPLTGIEK*ARGGSV
Trigger: AACTGAACCTCCTCTCGCTCACTTCTCTATCCCTGT...TAGAGGCCTAAGGGAGGACACTTTCAGAAAGGAGCTGAGTGTATGGTGGGTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR GCA 90 bp CCCACCACTACACTAAAGTCAAGGGACAAAATGAGGTACCCAAATAGCTCTGCAGTGGGAGACCCCATTTaGCTGTTGGATGGTGGAGCC +
Preference number: 4 (lower is better)
Translates to: PTTTLKSRDKMRYPNSSAVGDPI*LLDGGA
Trigger: GGCTCCACCATCCAACAGGCAAATGGGGTCTCCCAC...TGCAGAGCTATTTGGGTACCTCATTTTGTCCCTTGACTTTAGTGTAGTGGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR GCA 90 bp CCCACCACTACACTAAAGTCAAGGGACAAAATGAGGTACCCAAATAGCTCTGCACGCTCCAGAAAGCGCTaGCGTCGCTCATCTGGATCT +
Preference number: 4 (lower is better)
Translates to: PTTTLKSRDKMRYPNSSARSRKR*RRSSGS
Trigger: AGATCCAGATGAGCGACGGCAGCGCTTTCTGGAGCG...TGCAGAGCTATTTGGGTACCTCATTTTGTCCCTTGACTTTAGTGTAGTGGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR GCA 90 bp CCACCCATATTGCCATGTCCAAGGCAGATGGGAGGGGATAAGATGACATCTCTCGCGATTGTATCGGCATaGTCAGTTCTGTCCTTTGGC +
Preference number: 4 (lower is better)
Translates to: PPILPCPRQMGGDKMTSLAIVSA*SVLSFG
Trigger: GCCAAAGGACAGAACTGAGCATGCCGATACAATCGC...GAGAGATGTCATCTTATCCCCTCCCATCTGCCTTGGACATGGCAATATGGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420353.7
ENST00000456903.8
ENST00000548446.6
CDS-3UTR GCA 90 bp ATATTGCCATGTCCAAGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGGCTGAACCTGGGGTCCTTTaGTGGGACCAGTTCTGCACT +
Preference number: 4 (lower is better)
Translates to: ILPCPRQMGGDKMTSLLAEPGVL*WDQFCT
Trigger: AGTGCAGAACTGGTCCCAGCAAAGGACCCCAGGTTC...AGCCAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCTTGGACATGGCAATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR GCA 90 bp CCCACCACTACACTAAAGTCAAGGGACAAAATGAGGTACCCAAATAGCTCTGCACTGTGGTTCTGGCAGTaGTCCTCACTGAGGTCCCGT +
Preference number: 4 (lower is better)
Translates to: PTTTLKSRDKMRYPNSSALWFWQ*SSLRSR
Trigger: ACGGGACCTCAGTGAGGAGCACTGCCAGAACCACAG...TGCAGAGCTATTTGGGTACCTCATTTTGTCCCTTGACTTTAGTGTAGTGGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR GCA 90 bp GAGTGCTTGTGTATCGAGCACTCACATTGGAGTGGGGTGGGAAGCCTGAGTCCTAGATTACTGTGGCACTaGCCTAAGGTAAAGTCAGTG +
Preference number: 4 (lower is better)
Translates to: ECLCIEHSHWSGVGSLSPRLLWH*PKVKSV
Trigger: CACTGACTTTACCTTAGGGCAGTGCCACAGTAATCT...AGGACTCAGGCTTCCCACCCCACTCCAATGTGAGTGCTCGATACACAAGCACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420353.7
CDS-3UTR CCA 90 bp AGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGGCTCTTGGGCGGGCGAGCTTTGATTTTGATGTCTaGTGTGGAAGGCAGAGACAT +
Preference number: 4 (lower is better)
Translates to: RQMGGDKMTSLLALGRASFDFDV*CGRQRH
Trigger: ATGTCTCTGCCTTCCACACCAGACATCAAAATCAAA...GCTCGCCCGCCCAAGAGCCAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420353.7
ENST00000456903.8
ENST00000548446.6
CDS-3UTR CCA 90 bp CCAGTCCCAGGAGATTGTGAGAACCAGCTCACAGGGATCATGCTGAATCAGGTGAAGGGTTGGATGAAGTaGATCATAGCCCAAGTGGAG +
Preference number: 4 (lower is better)
Translates to: PVPGDCENQLTGIMLNQVKGWMK*IIAQVE
Trigger: CTCCACTTGGGCTATGATCCACTTCATCCAACCCTT...CACCTGATTCAGCATGATCCCTGTGAGCTGGTTCTCACAATCTCCTGGGACTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420353.7
CDS-3UTR CCA 90 bp GCTCTGGGACAACTGGAAGGGTTTCATACGGAAAGGCAATTAAAGCTGACCTATGAATGTTGGGCACCATaGACACAGGTCTGGCCAGCG +
Preference number: 4 (lower is better)
Translates to: ALGQLEGFHTERQLKLTYECWAP*TQVWPA
Trigger: CGCTGGCCAGACCTGTGTCCATGGTGCCCAACATTC...ATAGGTCAGCTTTAATTGCCTTTCCGTATGAAACCCTTCCAGTTGTCCCAGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CCA 90 bp CCCATATTGCCATGTCCAAGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGACAGATACACGTGCATaGGGCAGGGGTGATTGTTCG +
Preference number: 4 (lower is better)
Translates to: PILPCPRQMGGDKMTSLLTDTRA*GRGDCS
Trigger: CGAACAATCACCCCTGCCCCATGCACGTGTATCTGT...CAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCTTGGACATGGCAATATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CCA 90 bp GCTCTGGGACAACTGGAAGGGTTTCATACGGAAAGGCAATTAAAGCTGACCTATGGCTTAGTGGGGTGGTaGGAAAGACCCCACCACTAC +
Preference number: 4 (lower is better)
Translates to: ALGQLEGFHTERQLKLTYGLVGW*ERPHHY
Trigger: GTAGTGGTGGGGTCTTTCCCACCACCCCACTAAGCC...ATAGGTCAGCTTTAATTGCCTTTCCGTATGAAACCCTTCCAGTTGTCCCAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CCA 90 bp CCCACCACTACACTAAAGTCAAGGGACAAAATGAGGTACCCAAATAGCTCTGCACAAGGCTTAGTGGGGTaGTGGGAAAGACCCCACCAC +
Preference number: 4 (lower is better)
Translates to: PTTTLKSRDKMRYPNSSAQGLVG*WERPHH
Trigger: GTGGTGGGGTCTTTCCCACCACCCCACTAAGCCTTG...TGCAGAGCTATTTGGGTACCTCATTTTGTCCCTTGACTTTAGTGTAGTGGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CCA 90 bp ATATTGCCATGTCCAAGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGGCTCCTGGGGTCCTTTGCTaGGACCAGTTCTGCACTTTC +
Preference number: 4 (lower is better)
Translates to: ILPCPRQMGGDKMTSLLAPGVLC*DQFCTF
Trigger: GAAAGTGCAGAACTGGTCCCAGCAAAGGACCCCAGG...AGCCAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCTTGGACATGGCAATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CCA 90 bp GGGGTAGAACAAAGGAACTCGAGAGTCCCCTACATGACAGCCTCCAGGAGGGCTAACCTGTTACCTGACTaGTTCACTAGGACAGGATAT +
Preference number: 4 (lower is better)
Translates to: GVEQRNSRVPYMTASRRANLLPD*FTRTGY
Trigger: ATATCCTGTCCTAGTGAACCAGTCAGGTAACAGGTT...AGCCCTCCTGGAGGCTGTCATGTAGGGGACTCTCGAGTTCCTTTGTTCTACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CCA 90 bp CCACCCATATTGCCATGTCCAAGGCAGATGGGAGGGGATAAGATGACATCTCTCAGGGCCTATTCCTGTTaGGTACCTGATGGTAGAGGA +
Preference number: 4 (lower is better)
Translates to: PPILPCPRQMGGDKMTSLRAYSC*VPDGRG
Trigger: TCCTCTACCATCAGGTACCCAACAGGAATAGGCCCT...GAGAGATGTCATCTTATCCCCTCCCATCTGCCTTGGACATGGCAATATGGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CCA 90 bp GGAAAGGAAGACAGTATGGTTAGGGAGAATAGAGCGAAGCCCCTGCCTCAGCCCCATGATGTTTGGTTCTaGTCCAGATGGATCTGGAAG +
Preference number: 4 (lower is better)
Translates to: GKEDSMVRENRAKPLPQPHDVWF*SRWIWK
Trigger: CTTCCAGATCCATCTGGACCAGAACCAAACATCATG...GGGCTGAGGCAGGGGCTTCGCTCTATTCTCCCTAACCATACTGTCTTCCTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420353.7
CDS-3UTR CCA 90 bp CCACCCATATTGCCATGTCCAAGGCAGATGGGAGGGGATAAGATGACATCTCTCCCTCTAGAAACGCCATaGACTTTAGGAAGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: PPILPCPRQMGGDKMTSLPLETP*TLGRAK
Trigger: CTTGGCCCTTCCTAAAGTCCATGGCGTTTCTAGAGG...GAGAGATGTCATCTTATCCCCTCCCATCTGCCTTGGACATGGCAATATGGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CCA 90 bp AGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGGCTCTTGGGCGGGCGAGCTTTTTGGTGTCTGTTTaGTGGTTCAGGCTGTACATA +
Preference number: 4 (lower is better)
Translates to: RQMGGDKMTSLLALGRASFLVSV*WFRLYI
Trigger: TATGTACAGCCTGAACCACCAAACAGACACCAAAAA...GCTCGCCCGCCCAAGAGCCAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CCA 90 bp GAGTGCTTGTGTATCGAGCACTCACATTGGAGTGGGGTGGGAAGCCTGAGTCCTCACCTTGGTATGGGGTaGGGGAATTTATGTCTGTAT +
Preference number: 4 (lower is better)
Translates to: ECLCIEHSHWSGVGSLSPHLGMG*GNLCLY
Trigger: ATACAGACATAAATTCCCCCACCCCATACCAAGGTG...AGGACTCAGGCTTCCCACCCCACTCCAATGTGAGTGCTCGATACACAAGCACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000420353.7
CDS-3UTR CCA 90 bp GGAAAGGAAGACAGTATGGTTAGGGAGAATAGAGCGAAGCCCCTGCCTCAGCCCAGCCTTTTCTCATTCTaGGGTAGGACTTTACCCCAA +
Preference number: 4 (lower is better)
Translates to: GKEDSMVRENRAKPLPQPSLFSF*GRTLPQ
Trigger: TTGGGGTAAAGTCCTACCCCAGAATGAGAAAAGGCT...GGGCTGAGGCAGGGGCTTCGCTCTATTCTCCCTAACCATACTGTCTTCCTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000420353.7
CDS-3UTR TCA 90 bp CCACCCATATTGCCATGTCCAAGGCAGATGGGAGGGGATAAGATGACATCTCTCTTCCACAACCACCATTaGTTGAGGAGACTTGGTGAG +
Preference number: 4 (lower is better)
Translates to: PPILPCPRQMGGDKMTSLFHNHH*LRRLGE
Trigger: CTCACCAAGTCTCCTCAATCAATGGTGGTTGTGGAA...GAGAGATGTCATCTTATCCCCTCCCATCTGCCTTGGACATGGCAATATGGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420353.7
ENST00000456903.8
ENST00000548446.6
CDS-3UTR TCA 90 bp AGTGACACCTTCCATGATGTTTGGTTCTGGTCCAGATGGATCTGGAAGACAAAGCATCAGGGTGCTGGATaGGAATCTGGCTCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: SDTFHDVWFWSRWIWKTKHQGAG*ESGSAL
Trigger: CAGAGCAGAGCCAGATTCTCATCCAGCACCCTGATG...CTTTGTCTTCCAGATCCATCTGGACCAGAACCAAACATCATGGAAGGTGTCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR TCA 90 bp CTCCTGTCCAGACCAATGCATGGTTTTAGGGATACGACTAAAATGAAGACAAATGTACTAGGGGTGGGCTaGGCTGGTGAGACCTGTGGC +
Preference number: 4 (lower is better)
Translates to: LLSRPMHGFRDTTKMKTNVLGVG*AGETCG
Trigger: GCCACAGGTCTCACCAGCTCAGCCCACCCCTAGTAC...ATTTGTCTTCATTTTAGTCGTATCCCTAAAACCATGCATTGGTCTGGACAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000420353.7
CDS-3UTR TCA 90 bp AGCAATAACAAGGTAAGTGAAGTTACCTTTGACTATCAGAGAAGTTTCAGGGCAGGGAGACCTGAGTCCTaGGTCCATGGGGTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: SNNKVSEVTFDYQRSFRAGRPES*VHGVAG
Trigger: CCCAGCCACCCCATGGACTCAGGACTCAGGTCTCCC...TGCCCTGAAACTTCTCTGATAGTCAAAGGTAACTTCACTTACCTTGTTATTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR TCA 90 bp ATATTGCCATGTCCAAGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGGCTACAGGCCTCTGGCTCTaGATTGCTTCCTATGGTCCT +
Preference number: 4 (lower is better)
Translates to: ILPCPRQMGGDKMTSLLATGLWL*IASYGP
Trigger: AGGACCATAGGAAGCAATTCAGAGCCAGAGGCCTGT...AGCCAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCTTGGACATGGCAATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR TCA 90 bp ATATTGCCATGTCCAAGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGGCTCACTCAGCTCCTTTCTaGAAGTGTCCTCCCTTAGGC +
Preference number: 4 (lower is better)
Translates to: ILPCPRQMGGDKMTSLLAHSAPF*KCPPLG
Trigger: GCCTAAGGGAGGACACTTTCAGAAAGGAGCTGAGTG...AGCCAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCTTGGACATGGCAATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR GCA 90 bp CCAGTCCCAGGAGATTGTGAGAACCAGCTCACAGGGATCATGCTGAATCAGGTGCTTGTGTTTATGAACTaGCAGGTGGTCCTCGTTTGT +
Preference number: 4 (lower is better)
Translates to: PVPGDCENQLTGIMLNQVLVFMN*QVVLVC
Trigger: ACAAACGAGGACCACCTGGCAGTTCATAAACACAAG...CACCTGATTCAGCATGATCCCTGTGAGCTGGTTCTCACAATCTCCTGGGACTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420353.7
CDS-3UTR CCA 90 bp ATATTGCCATGTCCAAGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGGCTTGGGGAGGGAAGGGTTaGATGAAGTGGATCATAGCC +
Preference number: 4 (lower is better)
Translates to: ILPCPRQMGGDKMTSLLAWGGKG*MKWIIA
Trigger: GGCTATGATCCACTTCATCCAACCCTTCCCTCCCCA...AGCCAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCTTGGACATGGCAATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420353.7
ENST00000456903.8
ENST00000548446.6
CDS-3UTR CCA 90 bp CCCATATTGCCATGTCCAAGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGTTGCCTGTTGGATGGTaGAGCCTGTGTGATGACAGA +
Preference number: 4 (lower is better)
Translates to: PILPCPRQMGGDKMTSLLLPVGW*SLCDDR
Trigger: TCTGTCATCACACAGGCTCCACCATCCAACAGGCAA...CAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCTTGGACATGGCAATATGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420353.7
ENST00000456903.8
ENST00000548446.6
CDS-3UTR CCA 90 bp CCCATATTGCCATGTCCAAGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGCATTTGCCTGTTGGATaGTGGAGCCTGTGTGATGAC +
Preference number: 4 (lower is better)
Translates to: PILPCPRQMGGDKMTSLLHLPVG*WSLCDD
Trigger: GTCATCACACAGGCTCCACCATCCAACAGGCAAATG...CAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCTTGGACATGGCAATATGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420353.7
ENST00000456903.8
ENST00000548446.6
CDS-3UTR CCA 90 bp ATATTGCCATGTCCAAGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGGCTGGATACCAGGAATGTTaGGCACCATGGACACAGGTC +
Preference number: 4 (lower is better)
Translates to: ILPCPRQMGGDKMTSLLAGYQEC*APWTQV
Trigger: GACCTGTGTCCATGGTGCCCAACATTCCTGGTATCC...AGCCAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCTTGGACATGGCAATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420353.7
ENST00000456903.8
ENST00000548446.6
CDS-3UTR CCA 90 bp CCACCCATATTGCCATGTCCAAGGCAGATGGGAGGGGATAAGATGACATCTCTCACTACTGTTAACTGGTaGGCCAGGGATACCAGGAAT +
Preference number: 4 (lower is better)
Translates to: PPILPCPRQMGGDKMTSLTTVNW*ARDTRN
Trigger: ATTCCTGGTATCCCTGGCCCACCAGTTAACAGTAGT...GAGAGATGTCATCTTATCCCCTCCCATCTGCCTTGGACATGGCAATATGGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420353.7
ENST00000456903.8
ENST00000548446.6
CDS-3UTR CCA 90 bp CTCTGCTTGTGTGCCTCTTGGAGGCTACTCAGATTTGCAACACACAATTCCCCCACTACTGTTAACTGGTaGGCCAGGGATACCAGGAAT +
Preference number: 4 (lower is better)
Translates to: LCLCASWRLLRFATHNSPTTVNW*ARDTRN
Trigger: ATTCCTGGTATCCCTGGCCCACCAGTTAACAGTAGT...GGGGGAATTGTGTGTTGCAAATCTGAGTAGCCTCCAAGAGGCACACAAGCAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548446.6
CDS-3UTR CCA 90 bp GACACCCACCATACACTCAGCTCCTTTCTGAAAGTGTCCTCCCTTAGGCCTCTACTTGGTGAGTTAGGGTaGCTTTCAGTCTCATCTTGG +
Preference number: 4 (lower is better)
Translates to: DTHHTLSSFLKVSSLRPLLGELG*LSVSSW
Trigger: CCAAGATGAGACTGAAAGCCACCCTAACTCACCAAG...TAGAGGCCTAAGGGAGGACACTTTCAGAAAGGAGCTGAGTGTATGGTGGGTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CCA 90 bp CCAGTCCCAGGAGATTGTGAGAACCAGCTCACAGGGATCATGCTGAATCAGGTGGCTCTGAGCTTTCCTTaGGGCTTTCTAAATAGCCTT +
Preference number: 4 (lower is better)
Translates to: PVPGDCENQLTGIMLNQVALSFP*GFLNSL
Trigger: AAGGCTATTTAGAAAGCCCCAAGGAAAGCTCAGAGC...CACCTGATTCAGCATGATCCCTGTGAGCTGGTTCTCACAATCTCCTGGGACTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420353.7
CDS-3UTR CCA 90 bp CCCATATTGCCATGTCCAAGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGATTGTTCGGACCATCTaGAAAGGCCTTTGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: PILPCPRQMGGDKMTSLLIVRTI*KGLWLW
Trigger: CCACAGCCAAAGGCCTTTCCAGATGGTCCGAACAAT...CAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCTTGGACATGGCAATATGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CCA 90 bp CCCACCACTACACTAAAGTCAAGGGACAAAATGAGGTACCCAAATAGCTCTGCAATCGAGCACTCACATTaGAGTGGGGTGGGAAGCCTG +
Preference number: 4 (lower is better)
Translates to: PTTTLKSRDKMRYPNSSAIEHSH*SGVGSL
Trigger: CAGGCTTCCCACCCCACTCCAATGTGAGTGCTCGAT...TGCAGAGCTATTTGGGTACCTCATTTTGTCCCTTGACTTTAGTGTAGTGGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CCA 90 bp GCTCTGGGACAACTGGAAGGGTTTCATACGGAAAGGCAATTAAAGCTGACCTATGTGGCCTTGGGTACGTaGCAGCTAGCTAGAGTGCTT +
Preference number: 4 (lower is better)
Translates to: ALGQLEGFHTERQLKLTYVALGT*QLARVL
Trigger: AAGCACTCTAGCTAGCTGCCACGTACCCAAGGCCAC...ATAGGTCAGCTTTAATTGCCTTTCCGTATGAAACCCTTCCAGTTGTCCCAGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CCA 90 bp TTTGTTGGCCTCTCTAGTATTGTGGGAGGCTTTCTTAGACTTTTCAACTCTAAGTGTCCCCTCCCTCTGTaGCCTTGGGTACGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: FVGLSSIVGGFLRLFNSKCPLPL*PWVRGS
Trigger: GCTGCCACGTACCCAAGGCCACAGAGGGAGGGGACA...CTTAGAGTTGAAAAGTCTAAGAAAGCCTCCCACAATACTAGAGAGGCCAACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CCA 90 bp AGTGACACCTTCCATGATGTTTGGTTCTGGTCCAGATGGATCTGGAAGACAAAGCTCCATCTACCAGGATaGGTGGTGCTAGAGGGCAGT +
Preference number: 4 (lower is better)
Translates to: SDTFHDVWFWSRWIWKTKLHLPG*VVLEGS
Trigger: ACTGCCCTCTAGCACCACCCATCCTGGTAGATGGAG...CTTTGTCTTCCAGATCCATCTGGACCAGAACCAAACATCATGGAAGGTGTCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CCA 90 bp GACACCCACCATACACTCAGCTCCTTTCTGAAAGTGTCCTCCCTTAGGCCTCTAGTTCCCAGATTACTGTaGCACTGCCCTAAGGTAAAG +
Preference number: 4 (lower is better)
Translates to: DTHHTLSSFLKVSSLRPLVPRLL*HCPKVK
Trigger: CTTTACCTTAGGGCAGTGCCACAGTAATCTGGGAAC...TAGAGGCCTAAGGGAGGACACTTTCAGAAAGGAGCTGAGTGTATGGTGGGTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420353.7
CDS-3UTR CCA 90 bp AGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGGCTCTTGGGCGGGCGAGCCTTATCCCTAAGAAATaGTTCTCAACCTTTAGTGTG +
Preference number: 4 (lower is better)
Translates to: RQMGGDKMTSLLALGRASLIPKK*FSTFSV
Trigger: CACACTAAAGGTTGAGAACCATTTCTTAGGGATAAG...GCTCGCCCGCCCAAGAGCCAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420353.7
3UTR CAA 72 bp GGTTCTGACCTGCTGCTTCCTTATTTCAGTGCCATTTaGTTACTGTGGTTCTGGCAGTGCTCCTCACTGAGG +
Preference number: 4 (lower is better)
Translates to: GSDLLLPYFSAI*LLWFWQCSSLR
Trigger: CCTCAGTGAGGAGCACTGCCAGAACCACAGTAACAAAATGGCACTGAAATAAGGAAGCAGCAGGTCAGAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
3UTR CAA 72 bp CTGGGCACTGGGGAGACCCAGACCGAGTTGAGTTCCTaGATAAGATGGAGAGGTGTTGCTACATGTCAAAAA +
Preference number: 4 (lower is better)
Translates to: LGTGETQTELSS*IRWRGVATCQK
Trigger: TTTTTGACATGTAGCAACACCTCTCCATCTTATCAAGGAACTCAACTCGGTCTGGGTCTCCCCAGTGCCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420353.7
CDS-3UTR TCA 90 bp ACAAGAGGACTAATTTTCGGTGACGACAGACTTGTGCTGATCCATCATCTGGAAATCTGCAATGATGACTaGGTCAGTTCGGGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: TRGLIFGDDRLVLIHHLEICNDD*VSSGWA
Trigger: GGCCCAGCCCGAACTGACTCAGTCATCATTGCAGAT...TTCCAGATGATGGATCAGCACAAGTCTGTCGTCACCGAAAATTAGTCCTCTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548118.6
ENST00000591397.1
CDS-3UTR TCA 90 bp CCCATATTGCCATGTCCAAGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGTTCCACAACCACCATTaGTTGAGGAGACTTGGTGAG +
Preference number: 4 (lower is better)
Translates to: PILPCPRQMGGDKMTSLLFHNHH*LRRLGE
Trigger: CTCACCAAGTCTCCTCAATCAATGGTGGTTGTGGAA...CAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCTTGGACATGGCAATATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420353.7
ENST00000456903.8
ENST00000548446.6
CDS-3UTR TCA 90 bp GACACCCACCATACACTCAGCTCCTTTCTGAAAGTGTCCTCCCTTAGGCCTCTAGAATGTTCTGAGAAGTaGGTTCTTCGGCCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: DTHHTLSSFLKVSSLRPLECSEK*VLRPSS
Trigger: AGAAGAAGGCCGAAGAACTCACTTCTCAGAACATTC...TAGAGGCCTAAGGGAGGACACTTTCAGAAAGGAGCTGAGTGTATGGTGGGTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR TCA 90 bp GGAAAGGAAGACAGTATGGTTAGGGAGAATAGAGCGAAGCCCCTGCCTCAGCCCCATTGCGTAGTAATGTaGCTTCATTACTCAGCTGAA +
Preference number: 4 (lower is better)
Translates to: GKEDSMVRENRAKPLPQPHCVVM*LHYSAE
Trigger: TTCAGCTGAGTAATGAAGTCACATTACTACGCAATG...GGGCTGAGGCAGGGGCTTCGCTCTATTCTCCCTAACCATACTGTCTTCCTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420353.7
CDS-3UTR TCA 90 bp ATATTGCCATGTCCAAGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGGCTGGGACTGTGGGGTCATaGTTACATGCGATTGTATCG +
Preference number: 4 (lower is better)
Translates to: ILPCPRQMGGDKMTSLLAGTVGS*LHAIVS
Trigger: CGATACAATCGCATGTAATCATGACCCCACAGTCCC...AGCCAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCTTGGACATGGCAATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420353.7
ENST00000456903.8
ENST00000548446.6
CDS-3UTR TCA 90 bp AGCAATAACAAGGTAAGTGAAGTTACCTTTGACTATCAGAGAAGTTTCAGGGCACGAGAGTCCCCTACATaGCAGCCTCCAGGAGGGCTG +
Preference number: 4 (lower is better)
Translates to: SNNKVSEVTFDYQRSFRARESPT*QPPGGL
Trigger: CAGCCCTCCTGGAGGCTGTCATGTAGGGGACTCTCG...TGCCCTGAAACTTCTCTGATAGTCAAAGGTAACTTCACTTACCTTGTTATTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR TCA 90 bp GCTCTGGGACAACTGGAAGGGTTTCATACGGAAAGGCAATTAAAGCTGACCTATGAGGGACAAGAGAGATaGATTGCTCCCTCTGCAACC +
Preference number: 4 (lower is better)
Translates to: ALGQLEGFHTERQLKLTYEGQER*IAPSAT
Trigger: GGTTGCAGAGGGAGCAATTCATCTCTCTTGTCCCTC...ATAGGTCAGCTTTAATTGCCTTTCCGTATGAAACCCTTCCAGTTGTCCCAGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR GCA 90 bp CTCTGCTTGTGTGCCTCTTGGAGGCTACTCAGATTTGCAACACACAATTCCCCCCTTGTGTTTATGAACTaGCAGGTGGTCCTCGTTTGT +
Preference number: 4 (lower is better)
Translates to: LCLCASWRLLRFATHNSPLVFMN*QVVLVC
Trigger: ACAAACGAGGACCACCTGGCAGTTCATAAACACAAG...GGGGGAATTGTGTGTTGCAAATCTGAGTAGCCTCCAAGAGGCACACAAGCAGAG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000548446.6
CDS-3UTR GCA 90 bp CTCCTGTCCAGACCAATGCATGGTTTTAGGGATACGACTAAAATGAAGACAAATGGGCTGTCACCATGGTaGTGGCAGTACCCACCACCA +
Preference number: 4 (lower is better)
Translates to: LLSRPMHGFRDTTKMKTNGLSPW*WQYPPP
Trigger: TGGTGGTGGGTACTGCCAGCACCATGGTGACAGCCC...ATTTGTCTTCATTTTAGTCGTATCCCTAAAACCATGCATTGGTCTGGACAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420353.7
CDS-3UTR GCA 90 bp CCAGTCCCAGGAGATTGTGAGAACCAGCTCACAGGGATCATGCTGAATCAGGTGATGAATTGCTCCCTCTaGAACCCAACTCTTCAAAGT +
Preference number: 4 (lower is better)
Translates to: PVPGDCENQLTGIMLNQVMNCSL*NPTLQS
Trigger: ACTTTGAAGAGTTGGGTTGCAGAGGGAGCAATTCAT...CACCTGATTCAGCATGATCCCTGTGAGCTGGTTCTCACAATCTCCTGGGACTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420353.7
CDS-3UTR CCA 90 bp TTTGTTGGCCTCTCTAGTATTGTGGGAGGCTTTCTTAGACTTTTCAACTCTAAGGAGGGAGGGAGCCAGTaGGAGACCCCATTTGCCTGT +
Preference number: 4 (lower is better)
Translates to: FVGLSSIVGGFLRLFNSKEGGSQ*ETPFAC
Trigger: ACAGGCAAATGGGGTCTCCCACTGGCTCCCTCCCTC...CTTAGAGTTGAAAAGTCTAAGAAAGCCTCCCACAATACTAGAGAGGCCAACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CCA 90 bp ATATTGCCATGTCCAAGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGGCTTCTGATGGTATAGGGTaGCCAGAGGGAGAAATGGAG +
Preference number: 4 (lower is better)
Translates to: ILPCPRQMGGDKMTSLLASDGIG*PEGEME
Trigger: CTCCATTTCTCCCTCTGGCCACCCTATACCATCAGA...AGCCAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCTTGGACATGGCAATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420353.7
ENST00000456903.8
ENST00000548446.6
CDS-3UTR CCA 90 bp CCACCCATATTGCCATGTCCAAGGCAGATGGGAGGGGATAAGATGACATCTCTCGCTCTGAGCTTTCCTTaGGGCTTTCTAAATAGCCTT +
Preference number: 4 (lower is better)
Translates to: PPILPCPRQMGGDKMTSLALSFP*GFLNSL
Trigger: AAGGCTATTTAGAAAGCCCCAAGGAAAGCTCAGAGC...GAGAGATGTCATCTTATCCCCTCCCATCTGCCTTGGACATGGCAATATGGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420353.7
ENST00000456903.8
ENST00000548446.6
CDS-3UTR CCA 90 bp AGTGACACCTTCCATGATGTTTGGTTCTGGTCCAGATGGATCTGGAAGACAAAGACAGATACACGTGCATaGGGCAGGGGTGATTGTTCG +
Preference number: 4 (lower is better)
Translates to: SDTFHDVWFWSRWIWKTKTDTRA*GRGDCS
Trigger: CGAACAATCACCCCTGCCCCATGCACGTGTATCTGT...CTTTGTCTTCCAGATCCATCTGGACCAGAACCAAACATCATGGAAGGTGTCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CCA 90 bp GCTCTGGGACAACTGGAAGGGTTTCATACGGAAAGGCAATTAAAGCTGACCTATTTGTCTTTAGGGGTGTaGCCTGTTCAGCACCAGCTC +
Preference number: 4 (lower is better)
Translates to: ALGQLEGFHTERQLKLTYLSLGV*PVQHQL
Trigger: GAGCTGGTGCTGAACAGGCCACACCCCTAAAGACAA...ATAGGTCAGCTTTAATTGCCTTTCCGTATGAAACCCTTCCAGTTGTCCCAGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CCA 90 bp CCACCCATATTGCCATGTCCAAGGCAGATGGGAGGGGATAAGATGACATCTCTCTGGTCCAGATGGATCTaGAAGACAAAGATTTGGGGA +
Preference number: 4 (lower is better)
Translates to: PPILPCPRQMGGDKMTSLWSRWI*KTKIWG
Trigger: TCCCCAAATCTTTGTCTTCCAGATCCATCTGGACCA...GAGAGATGTCATCTTATCCCCTCCCATCTGCCTTGGACATGGCAATATGGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CCA 90 bp GACACCCACCATACACTCAGCTCCTTTCTGAAAGTGTCCTCCCTTAGGCCTCTACATGATGTTTGGTTCTaGTCCAGATGGATCTGGAAG +
Preference number: 4 (lower is better)
Translates to: DTHHTLSSFLKVSSLRPLHDVWF*SRWIWK
Trigger: CTTCCAGATCCATCTGGACCAGAACCAAACATCATG...TAGAGGCCTAAGGGAGGACACTTTCAGAAAGGAGCTGAGTGTATGGTGGGTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CCA 90 bp CCACCCATATTGCCATGTCCAAGGCAGATGGGAGGGGATAAGATGACATCTCTCACCTTCCATGATGTTTaGTTCTGGTCCAGATGGATC +
Preference number: 4 (lower is better)
Translates to: PPILPCPRQMGGDKMTSLTFHDV*FWSRWI
Trigger: GATCCATCTGGACCAGAACCAAACATCATGGAAGGT...GAGAGATGTCATCTTATCCCCTCCCATCTGCCTTGGACATGGCAATATGGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR TCA 90 bp GACACCCACCATACACTCAGCTCCTTTCTGAAAGTGTCCTCCCTTAGGCCTCTACATCTGCAGCTTTCTTaGATTCATGTTCAAAGGAGC +
Preference number: 4 (lower is better)
Translates to: DTHHTLSSFLKVSSLRPLHLQLS*IHVQRS
Trigger: GCTCCTTTGAACATGAATTCAAGAAAGCTGCAGATG...TAGAGGCCTAAGGGAGGACACTTTCAGAAAGGAGCTGAGTGTATGGTGGGTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR TCA 90 bp CTCCTGTCCAGACCAATGCATGGTTTTAGGGATACGACTAAAATGAAGACAAATGCTATCAGGTGGGGATaGGTCTACCTCCACTGGCTC +
Preference number: 4 (lower is better)
Translates to: LLSRPMHGFRDTTKMKTNAIRWG*VYLHWL
Trigger: GAGCCAGTGGAGGTAGACTCATCCCCACCTGATAGC...ATTTGTCTTCATTTTAGTCGTATCCCTAAAACCATGCATTGGTCTGGACAGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000420353.7
CDS-3UTR TCA 90 bp TTTGTTGGCCTCTCTAGTATTGTGGGAGGCTTTCTTAGACTTTTCAACTCTAAGGCTATCAGGTGGGGATaGGTCTACCTCCACTGGCTC +
Preference number: 4 (lower is better)
Translates to: FVGLSSIVGGFLRLFNSKAIRWG*VYLHWL
Trigger: GAGCCAGTGGAGGTAGACTCATCCCCACCTGATAGC...CTTAGAGTTGAAAAGTCTAAGAAAGCCTCCCACAATACTAGAGAGGCCAACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR TCA 90 bp GCTCTGGGACAACTGGAAGGGTTTCATACGGAAAGGCAATTAAAGCTGACCTATTCTCATCTTGGCTTCTaGTGGTATAGGGTGGCCAGA +
Preference number: 4 (lower is better)
Translates to: ALGQLEGFHTERQLKLTYSHLGF*WYRVAR
Trigger: TCTGGCCACCCTATACCATCAGAAGCCAAGATGAGA...ATAGGTCAGCTTTAATTGCCTTTCCGTATGAAACCCTTCCAGTTGTCCCAGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR TCA 90 bp TTTGTTGGCCTCTCTAGTATTGTGGGAGGCTTTCTTAGACTTTTCAACTCTAAGGCTAGGGGCTGTTGCTaGGCTGTGCTGAATCACAGG +
Preference number: 4 (lower is better)
Translates to: FVGLSSIVGGFLRLFNSKARGCC*AVLNHR
Trigger: CCTGTGATTCAGCACAGCTCAGCAACAGCCCCTAGC...CTTAGAGTTGAAAAGTCTAAGAAAGCCTCCCACAATACTAGAGAGGCCAACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR TCA 90 bp TTTGTTGGCCTCTCTAGTATTGTGGGAGGCTTTCTTAGACTTTTCAACTCTAAGTGCATGGGGCAGGGGTaGTTGTTCGGACCATCTGGA +
Preference number: 4 (lower is better)
Translates to: FVGLSSIVGGFLRLFNSKCMGQG*LFGPSG
Trigger: TCCAGATGGTCCGAACAATCACCCCTGCCCCATGCA...CTTAGAGTTGAAAAGTCTAAGAAAGCCTCCCACAATACTAGAGAGGCCAACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR TCA 90 bp AGTGACACCTTCCATGATGTTTGGTTCTGGTCCAGATGGATCTGGAAGACAAAGGGGAAGAGAGGGAACTaGGAAACCCCAAACCTAGAA +
Preference number: 4 (lower is better)
Translates to: SDTFHDVWFWSRWIWKTKGKRGN*ETPNLE
Trigger: TTCTAGGTTTGGGGTTTCTCAGTTCCCTCTCTTCCC...CTTTGTCTTCCAGATCCATCTGGACCAGAACCAAACATCATGGAAGGTGTCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR TCA 90 bp GACACCCACCATACACTCAGCTCCTTTCTGAAAGTGTCCTCCCTTAGGCCTCTAGCAGGAGCAGAAAAATaGCCAAAGATGACAATATGC +
Preference number: 4 (lower is better)
Translates to: DTHHTLSSFLKVSSLRPLAGAEK*PKMTIC
Trigger: GCATATTGTCATCTTTGGTCATTTTTCTGCTCCTGC...TAGAGGCCTAAGGGAGGACACTTTCAGAAAGGAGCTGAGTGTATGGTGGGTGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR TCA 90 bp CCACCCATATTGCCATGTCCAAGGCAGATGGGAGGGGATAAGATGACATCTCTCTTTCTCATTCCCCTGTaGCAGTCAATTTTGGAGACA +
Preference number: 4 (lower is better)
Translates to: PPILPCPRQMGGDKMTSLFLIPL*QSILET
Trigger: TGTCTCCAAAATTGACTGTCACAGGGGAATGAGAAA...GAGAGATGTCATCTTATCCCCTCCCATCTGCCTTGGACATGGCAATATGGGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR TCA 90 bp ATATTGCCATGTCCAAGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGGCTCTATCTAGGGGGTTCTaGCCTGCTGCTTCCTTATTT +
Preference number: 4 (lower is better)
Translates to: ILPCPRQMGGDKMTSLLALSRGF*PAASLF
Trigger: AAATAAGGAAGCAGCAGGTCAGAACCCCCTAGATAG...AGCCAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCTTGGACATGGCAATAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR TCA 90 bp AGTGACACCTTCCATGATGTTTGGTTCTGGTCCAGATGGATCTGGAAGACAAAGGGTGCTAGAGGGCAGTaGATCAAGAAAGGAGCCAAA +
Preference number: 4 (lower is better)
Translates to: SDTFHDVWFWSRWIWKTKGARGQ*IKKGAK
Trigger: TTTGGCTCCTTTCTTGATTCACTGCCCTCTAGCACC...CTTTGTCTTCCAGATCCATCTGGACCAGAACCAAACATCATGGAAGGTGTCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR GCA 90 bp CTCCTGTCCAGACCAATGCATGGTTTTAGGGATACGACTAAAATGAAGACAAATGTGGGAGACCCCATTTaGCTGTTGGATGGTGGAGCC +
Preference number: 4 (lower is better)
Translates to: LLSRPMHGFRDTTKMKTNVGDPI*LLDGGA
Trigger: GGCTCCACCATCCAACAGGCAAATGGGGTCTCCCAC...ATTTGTCTTCATTTTAGTCGTATCCCTAAAACCATGCATTGGTCTGGACAGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000420353.7
CDS-3UTR GCA 90 bp AGCAATAACAAGGTAAGTGAAGTTACCTTTGACTATCAGAGAAGTTTCAGGGCAGGGCTGTCACCATGGTaGTGGCAGTACCCACCACCA +
Preference number: 4 (lower is better)
Translates to: SNNKVSEVTFDYQRSFRAGLSPW*WQYPPP
Trigger: TGGTGGTGGGTACTGCCAGCACCATGGTGACAGCCC...TGCCCTGAAACTTCTCTGATAGTCAAAGGTAACTTCACTTACCTTGTTATTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR GCA 90 bp AGCAATAACAAGGTAAGTGAAGTTACCTTTGACTATCAGAGAAGTTTCAGGGCAGGCCACAGCTTCAGCTaGAGAGCGAACACTGAGGCC +
Preference number: 4 (lower is better)
Translates to: SNNKVSEVTFDYQRSFRAGHSFS*RANTEA
Trigger: GGCCTCAGTGTTCGCTCTGCAGCTGAAGCTGTGGCC...TGCCCTGAAACTTCTCTGATAGTCAAAGGTAACTTCACTTACCTTGTTATTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR GCA 90 bp AGTGACACCTTCCATGATGTTTGGTTCTGGTCCAGATGGATCTGGAAGACAAAGGGTCCTGGTAGAAACTaGATAGTTCAGAGCCAAGGG +
Preference number: 4 (lower is better)
Translates to: SDTFHDVWFWSRWIWKTKGPGRN*IVQSQG
Trigger: CCCTTGGCTCTGAACTATGCAGTTTCTACCAGGACC...CTTTGTCTTCCAGATCCATCTGGACCAGAACCAAACATCATGGAAGGTGTCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR GCA 90 bp ATATTGCCATGTCCAAGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGGCTAGGACATTCTTGGCTTaGACAGATGGCAGAAAGTGG +
Preference number: 4 (lower is better)
Translates to: ILPCPRQMGGDKMTSLLARTFLA*TDGRKW
Trigger: CCACTTTCTGCCATCTGTGCAAGCCAAGAATGTCCT...AGCCAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCTTGGACATGGCAATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR GCA 90 bp GAGTGCTTGTGTATCGAGCACTCACATTGGAGTGGGGTGGGAAGCCTGAGTCCTCTGGCAGGGCATGTATaGAGTTACAAATTAATTCTT +
Preference number: 4 (lower is better)
Translates to: ECLCIEHSHWSGVGSLSPLAGHV*SYKLIL
Trigger: AAGAATTAATTTGTAACTGCATACATGCCCTGCCAG...AGGACTCAGGCTTCCCACCCCACTCCAATGTGAGTGCTCGATACACAAGCACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR GCA 90 bp GACACCCACCATACACTCAGCTCCTTTCTGAAAGTGTCCTCCCTTAGGCCTCTAAAAAACAAAATAGCCTaGAGCACTGCATCCTCCTAC +
Preference number: 4 (lower is better)
Translates to: DTHHTLSSFLKVSSLRPLKNKIA*STASSY
Trigger: GTAGGAGGATGCAGTGCTGCAGGCTATTTTGTTTTT...TAGAGGCCTAAGGGAGGACACTTTCAGAAAGGAGCTGAGTGTATGGTGGGTGTC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000420353.7
CDS-3UTR CCA 90 bp ATATTGCCATGTCCAAGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGGCTGATCAGAACAGGCTTTaGGGTAACCTCCTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: ILPCPRQMGGDKMTSLLADQNRL*GNLLLL
Trigger: AAGGAGAAGGAGGTTACCCCAAAGCCTGTTCTGATC...AGCCAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCTTGGACATGGCAATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420353.7
ENST00000456903.8
ENST00000548446.6
CDS-3UTR CCA 90 bp AGTGACACCTTCCATGATGTTTGGTTCTGGTCCAGATGGATCTGGAAGACAAAGCATTTGCCTGTTGGATaGTGGAGCCTGTGTGATGAC +
Preference number: 4 (lower is better)
Translates to: SDTFHDVWFWSRWIWKTKHLPVG*WSLCDD
Trigger: GTCATCACACAGGCTCCACCATCCAACAGGCAAATG...CTTTGTCTTCCAGATCCATCTGGACCAGAACCAAACATCATGGAAGGTGTCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CCA 90 bp GCTCTGGGACAACTGGAAGGGTTTCATACGGAAAGGCAATTAAAGCTGACCTATTCTGATGGTATAGGGTaGCCAGAGGGAGAAATGGAG +
Preference number: 4 (lower is better)
Translates to: ALGQLEGFHTERQLKLTYSDGIG*PEGEME
Trigger: CTCCATTTCTCCCTCTGGCCACCCTATACCATCAGA...ATAGGTCAGCTTTAATTGCCTTTCCGTATGAAACCCTTCCAGTTGTCCCAGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CCA 90 bp ATATTGCCATGTCCAAGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGGCTCTTGGTGAGTTAGGGTaGCTTTCAGTCTCATCTTGG +
Preference number: 4 (lower is better)
Translates to: ILPCPRQMGGDKMTSLLALGELG*LSVSSW
Trigger: CCAAGATGAGACTGAAAGCCACCCTAACTCACCAAG...AGCCAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCTTGGACATGGCAATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420353.7
ENST00000456903.8
ENST00000548446.6
CDS-3UTR CCA 90 bp TTTGTTGGCCTCTCTAGTATTGTGGGAGGCTTTCTTAGACTTTTCAACTCTAAGTGCTGGATGAGAATCTaGCTCTGCTCTGGGCGGGCT +
Preference number: 4 (lower is better)
Translates to: FVGLSSIVGGFLRLFNSKCWMRI*LCSGRA
Trigger: AGCCCGCCCAGAGCAGAGCCAGATTCTCATCCAGCA...CTTAGAGTTGAAAAGTCTAAGAAAGCCTCCCACAATACTAGAGAGGCCAACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CCA 90 bp AGCAATAACAAGGTAAGTGAAGTTACCTTTGACTATCAGAGAAGTTTCAGGGCACACAGCTTTCGCTTTTaGCGGCAGCGGGAGGCTGCA +
Preference number: 4 (lower is better)
Translates to: SNNKVSEVTFDYQRSFRAHSFRF*RQREAA
Trigger: TGCAGCCTCCCGCTGCCGCCAAAAGCGAAAGCTGTG...TGCCCTGAAACTTCTCTGATAGTCAAAGGTAACTTCACTTACCTTGTTATTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CCA 90 bp ATATTGCCATGTCCAAGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGGCTAGTAGCTGTTTCAACTaGGCCACCTCATTGCGTAGT +
Preference number: 4 (lower is better)
Translates to: ILPCPRQMGGDKMTSLLASSCFN*ATSLRS
Trigger: ACTACGCAATGAGGTGGCCCAGTTGAAACAGCTACT...AGCCAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCTTGGACATGGCAATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420353.7
ENST00000456903.8
ENST00000548446.6
CDS-3UTR CCA 90 bp GACACCCACCATACACTCAGCTCCTTTCTGAAAGTGTCCTCCCTTAGGCCTCTAACGTACATGACCACATaGCTAAAAAGCCCCATATCT +
Preference number: 4 (lower is better)
Translates to: DTHHTLSSFLKVSSLRPLTYMTT*LKSPIS
Trigger: AGATATGGGGCTTTTTAGCCATGTGGTCATGTACGT...TAGAGGCCTAAGGGAGGACACTTTCAGAAAGGAGCTGAGTGTATGGTGGGTGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CCA 90 bp GCTCTGGGACAACTGGAAGGGTTTCATACGGAAAGGCAATTAAAGCTGACCTATAAAGGCCTTTGGCTGTaGATGCATCAGAAACCCCAC +
Preference number: 4 (lower is better)
Translates to: ALGQLEGFHTERQLKLTYKGLWL*MHQKPH
Trigger: GTGGGGTTTCTGATGCATCCACAGCCAAAGGCCTTT...ATAGGTCAGCTTTAATTGCCTTTCCGTATGAAACCCTTCCAGTTGTCCCAGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CCA 90 bp CCCACCACTACACTAAAGTCAAGGGACAAAATGAGGTACCCAAATAGCTCTGCAAAAGGCCTTTGGCTGTaGATGCATCAGAAACCCCAC +
Preference number: 4 (lower is better)
Translates to: PTTTLKSRDKMRYPNSSAKGLWL*MHQKPH
Trigger: GTGGGGTTTCTGATGCATCCACAGCCAAAGGCCTTT...TGCAGAGCTATTTGGGTACCTCATTTTGTCCCTTGACTTTAGTGTAGTGGTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CCA 90 bp AGTGACACCTTCCATGATGTTTGGTTCTGGTCCAGATGGATCTGGAAGACAAAGCAGCCAGTCAGATTCTaGGCCCTTCCCTTTTCACTA +
Preference number: 4 (lower is better)
Translates to: SDTFHDVWFWSRWIWKTKQPVRF*ALPFSL
Trigger: TAGTGAAAAGGGAAGGGCCCAGAATCTGACTGGCTG...CTTTGTCTTCCAGATCCATCTGGACCAGAACCAAACATCATGGAAGGTGTCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CCA 90 bp CCCACCACTACACTAAAGTCAAGGGACAAAATGAGGTACCCAAATAGCTCTGCAGGGAGAGTGACCACATaGCTGGTAGCAATAACAAGG +
Preference number: 4 (lower is better)
Translates to: PTTTLKSRDKMRYPNSSAGRVTT*LVAITR
Trigger: CCTTGTTATTGCTACCAGCCATGTGGTCACTCTCCC...TGCAGAGCTATTTGGGTACCTCATTTTGTCCCTTGACTTTAGTGTAGTGGTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CCA 90 bp AGTGACACCTTCCATGATGTTTGGTTCTGGTCCAGATGGATCTGGAAGACAAAGGGGACAGCTGAAGCTTaGCTGGTCCTTACTGTAACA +
Preference number: 4 (lower is better)
Translates to: SDTFHDVWFWSRWIWKTKGTAEA*LVLTVT
Trigger: TGTTACAGTAAGGACCAGCCAAGCTTCAGCTGTCCC...CTTTGTCTTCCAGATCCATCTGGACCAGAACCAAACATCATGGAAGGTGTCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420353.7
CDS-3UTR CCA 90 bp TTTGTTGGCCTCTCTAGTATTGTGGGAGGCTTTCTTAGACTTTTCAACTCTAAGCTCCACTCTTGGGGCTaGAAGCTCATCTCCTCCCTG +
Preference number: 4 (lower is better)
Translates to: FVGLSSIVGGFLRLFNSKLHSWG*KLISSL
Trigger: CAGGGAGGAGATGAGCTTCCAGCCCCAAGAGTGGAG...CTTAGAGTTGAAAAGTCTAAGAAAGCCTCCCACAATACTAGAGAGGCCAACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420353.7
CDS-3UTR CCA 90 bp AGTGACACCTTCCATGATGTTTGGTTCTGGTCCAGATGGATCTGGAAGACAAAGTACTATGTTAGGATGTaGCAGCCTCCACTCTTGGGG +
Preference number: 4 (lower is better)
Translates to: SDTFHDVWFWSRWIWKTKYYVRM*QPPLLG
Trigger: CCCCAAGAGTGGAGGCTGCCACATCCTAACATAGTA...CTTTGTCTTCCAGATCCATCTGGACCAGAACCAAACATCATGGAAGGTGTCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420353.7
CDS-3UTR TCA 90 bp ACAAGAGGACTAATTTTCGGTGACGACAGACTTGTGCTGATCCATCATCTGGAATCATGCTTGTGTTTATaGACTGCCAGGTGGTCCTCG +
Preference number: 4 (lower is better)
Translates to: TRGLIFGDDRLVLIHHLESCLCL*TARWSS
Trigger: CGAGGACCACCTGGCAGTTCATAAACACAAGCATGA...TTCCAGATGATGGATCAGCACAAGTCTGTCGTCACCGAAAATTAGTCCTCTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548118.6
ENST00000591397.1
CDS-3UTR TCA 90 bp AGTGTAGCTGAGAAGTCTGATCAGCTCAGAAAAGAGTGGAATTTGGCAACAAATATCTGCAATGATGACTaGGTCAGTTCGGGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: SVAEKSDQLRKEWNLATNICNDD*VSSGWA
Trigger: GGCCCAGCCCGAACTGACTCAGTCATCATTGCAGAT...ATTTGTTGCCAAATTCCACTCTTTTCTGAGCTGATCAGACTTCTCAGCTACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548118.6
ENST00000591397.1
CDS-3UTR TCA 90 bp CCCATATTGCCATGTCCAAGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGCATCTGCAGCTTTCTTaGATTCATGTTCAAAGGAGC +
Preference number: 4 (lower is better)
Translates to: PILPCPRQMGGDKMTSLLHLQLS*IHVQRS
Trigger: GCTCCTTTGAACATGAATTCAAGAAAGCTGCAGATG...CAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCTTGGACATGGCAATATGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420353.7
ENST00000456903.8
ENST00000548446.6
CDS-3UTR TCA 90 bp ATATTGCCATGTCCAAGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGGCTAGTCAAGGGACAAAATaGGGTACCCAAATAGCTCTG +
Preference number: 4 (lower is better)
Translates to: ILPCPRQMGGDKMTSLLASQGTK*GTQIAL
Trigger: CAGAGCTATTTGGGTACCTCATTTTGTCCCTTGACT...AGCCAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCTTGGACATGGCAATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR TCA 90 bp ATATTGCCATGTCCAAGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGGCTAATAAGGCCACAAAATaGGGTTGCCAAGGCTTAGTG +
Preference number: 4 (lower is better)
Translates to: ILPCPRQMGGDKMTSLLANKATK*GCQGLV
Trigger: CACTAAGCCTTGGCAACCTCATTTTGTGGCCTTATT...AGCCAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCTTGGACATGGCAATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR TCA 90 bp CCAGTCCCAGGAGATTGTGAGAACCAGCTCACAGGGATCATGCTGAATCAGGTGCACAAGTTACGGCTGTaGATTTTTAAAGGCAAAAGT +
Preference number: 4 (lower is better)
Translates to: PVPGDCENQLTGIMLNQVHKLRL*IFKGKS
Trigger: ACTTTTGCCTTTAAAAATTCACAGCCGTAACTTGTG...CACCTGATTCAGCATGATCCCTGTGAGCTGGTTCTCACAATCTCCTGGGACTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420353.7
CDS-3UTR TCA 90 bp CTCCTGTCCAGACCAATGCATGGTTTTAGGGATACGACTAAAATGAAGACAAATGAATGGGGCAGAAAGTaGGCAGACCAGAAGACCTGG +
Preference number: 4 (lower is better)
Translates to: LLSRPMHGFRDTTKMKTNEWGRK*ADQKTW
Trigger: CCAGGTCTTCTGGTCTGCTCACTTTCTGCCCCATTC...ATTTGTCTTCATTTTAGTCGTATCCCTAAAACCATGCATTGGTCTGGACAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000420353.7
CDS-3UTR GCA 90 bp AGCAATAACAAGGTAAGTGAAGTTACCTTTGACTATCAGAGAAGTTTCAGGGCACACAGCCCGGGGCATTaGACACAAACGGTCTGTCGT +
Preference number: 4 (lower is better)
Translates to: SNNKVSEVTFDYQRSFRAHSPGH*TQTVCR
Trigger: ACGACAGACCGTTTGTGTGCAATGCCCCGGGCTGTG...TGCCCTGAAACTTCTCTGATAGTCAAAGGTAACTTCACTTACCTTGTTATTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR GCA 90 bp ATATTGCCATGTCCAAGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGGCTCTTGTGTTTATGAACTaGCAGGTGGTCCTCGTTTGT +
Preference number: 4 (lower is better)
Translates to: ILPCPRQMGGDKMTSLLALVFMN*QVVLVC
Trigger: ACAAACGAGGACCACCTGGCAGTTCATAAACACAAG...AGCCAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCTTGGACATGGCAATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420353.7
ENST00000456903.8
ENST00000548446.6
CDS-3UTR GCA 90 bp AGCAATAACAAGGTAAGTGAAGTTACCTTTGACTATCAGAGAAGTTTCAGGGCAATGAGAATCTGGCTCTaGTCTGGGCGGGCTGTCACC +
Preference number: 4 (lower is better)
Translates to: SNNKVSEVTFDYQRSFRAMRIWL*SGRAVT
Trigger: GGTGACAGCCCGCCCAGAGCAGAGCCAGATTCTCAT...TGCCCTGAAACTTCTCTGATAGTCAAAGGTAACTTCACTTACCTTGTTATTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR GCA 90 bp AGCAATAACAAGGTAAGTGAAGTTACCTTTGACTATCAGAGAAGTTTCAGGGCAAGAGGAGGCATCATCTaGCCGCAGACTGGGACTGTG +
Preference number: 4 (lower is better)
Translates to: SNNKVSEVTFDYQRSFRARGGII*PQTGTV
Trigger: CACAGTCCCAGTCTGCGGGCAGATGATGCCTCCTCT...TGCCCTGAAACTTCTCTGATAGTCAAAGGTAACTTCACTTACCTTGTTATTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR GCA 90 bp CCCACCACTACACTAAAGTCAAGGGACAAAATGAGGTACCCAAATAGCTCTGCAGCTTTAGGGCAAGGCTaGTACTGGGAAATCAAGACA +
Preference number: 4 (lower is better)
Translates to: PTTTLKSRDKMRYPNSSAALGQG*YWEIKT
Trigger: TGTCTTGATTTCCCAGTAGCAGCCTTGCCCTAAAGC...TGCAGAGCTATTTGGGTACCTCATTTTGTCCCTTGACTTTAGTGTAGTGGTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CCA 90 bp GCTCTGGGACAACTGGAAGGGTTTCATACGGAAAGGCAATTAAAGCTGACCTATGATCAGAACAGGCTTTaGGGTAACCTCCTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: ALGQLEGFHTERQLKLTYDQNRL*GNLLLL
Trigger: AAGGAGAAGGAGGTTACCCCAAAGCCTGTTCTGATC...ATAGGTCAGCTTTAATTGCCTTTCCGTATGAAACCCTTCCAGTTGTCCCAGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CCA 90 bp TTTGTTGGCCTCTCTAGTATTGTGGGAGGCTTTCTTAGACTTTTCAACTCTAAGGCCACTACTGTTAACTaGTGGGCCAGGGATACCAGG +
Preference number: 4 (lower is better)
Translates to: FVGLSSIVGGFLRLFNSKATTVN*WARDTR
Trigger: CCTGGTATCCCTGGCCCACCAGTTAACAGTAGTGGC...CTTAGAGTTGAAAAGTCTAAGAAAGCCTCCCACAATACTAGAGAGGCCAACAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CCA 90 bp ATATTGCCATGTCCAAGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGGCTGCTCTGAGCTTTCCTTaGGGCTTTCTAAATAGCCTT +
Preference number: 4 (lower is better)
Translates to: ILPCPRQMGGDKMTSLLAALSFP*GFLNSL
Trigger: AAGGCTATTTAGAAAGCCCCAAGGAAAGCTCAGAGC...AGCCAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCTTGGACATGGCAATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420353.7
ENST00000456903.8
ENST00000548446.6
CDS-3UTR CCA 90 bp AGCAATAACAAGGTAAGTGAAGTTACCTTTGACTATCAGAGAAGTTTCAGGGCACAAGGCTTAGTGGGGTaGTGGGAAAGACCCCACCAC +
Preference number: 4 (lower is better)
Translates to: SNNKVSEVTFDYQRSFRAQGLVG*WERPHH
Trigger: GTGGTGGGGTCTTTCCCACCACCCCACTAAGCCTTG...TGCCCTGAAACTTCTCTGATAGTCAAAGGTAACTTCACTTACCTTGTTATTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CCA 90 bp GCTCTGGGACAACTGGAAGGGTTTCATACGGAAAGGCAATTAAAGCTGACCTATTGGCTCTGGGACAACTaGAAGGGTTTCATACGGAAA +
Preference number: 4 (lower is better)
Translates to: ALGQLEGFHTERQLKLTYWLWDN*KGFIRK
Trigger: TTTCCGTATGAAACCCTTCCAGTTGTCCCAGAGCCA...ATAGGTCAGCTTTAATTGCCTTTCCGTATGAAACCCTTCCAGTTGTCCCAGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CCA 90 bp ATATTGCCATGTCCAAGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGGCTAGAGAAGGACATTCTTaGCTTGCACAGATGGCAGAA +
Preference number: 4 (lower is better)
Translates to: ILPCPRQMGGDKMTSLLAREGHS*LAQMAE
Trigger: TTCTGCCATCTGTGCAAGCCAAGAATGTCCTTCTCT...AGCCAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCTTGGACATGGCAATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CCA 90 bp AGTGACACCTTCCATGATGTTTGGTTCTGGTCCAGATGGATCTGGAAGACAAAGGCCATTTTGTTACTGTaGTTCTGGCAGTGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: SDTFHDVWFWSRWIWKTKAILLL*FWQCSS
Trigger: TGAGGAGCACTGCCAGAACCACAGTAACAAAATGGC...CTTTGTCTTCCAGATCCATCTGGACCAGAACCAAACATCATGGAAGGTGTCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CCA 90 bp CCCATATTGCCATGTCCAAGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGTGGTTCTGGTCCAGATaGATCTGGAAGACAAAGATT +
Preference number: 4 (lower is better)
Translates to: PILPCPRQMGGDKMTSLLWFWSR*IWKTKI
Trigger: AATCTTTGTCTTCCAGATCCATCTGGACCAGAACCA...CAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCTTGGACATGGCAATATGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CCA 90 bp CCCACCACTACACTAAAGTCAAGGGACAAAATGAGGTACCCAAATAGCTCTGCATTGGTGTCTGTTTGGTaGTTCAGGCTGTACATAGGG +
Preference number: 4 (lower is better)
Translates to: PTTTLKSRDKMRYPNSSALVSVW*FRLYIG
Trigger: CCCTATGTACAGCCTGAACCACCAAACAGACACCAA...TGCAGAGCTATTTGGGTACCTCATTTTGTCCCTTGACTTTAGTGTAGTGGTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CCA 90 bp AGTGACACCTTCCATGATGTTTGGTTCTGGTCCAGATGGATCTGGAAGACAAAGGTAACCACCTTGGTATaGGGTGGGGGAATTTATGTC +
Preference number: 4 (lower is better)
Translates to: SDTFHDVWFWSRWIWKTKVTTLV*GGGIYV
Trigger: GACATAAATTCCCCCACCCCATACCAAGGTGGTTAC...CTTTGTCTTCCAGATCCATCTGGACCAGAACCAAACATCATGGAAGGTGTCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420353.7
CDS-3UTR TCA 90 bp CCCACCACTACACTAAAGTCAAGGGACAAAATGAGGTACCCAAATAGCTCTGCAGAATGTTCTGAGAAGTaGGTTCTTCGGCCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: PTTTLKSRDKMRYPNSSAECSEK*VLRPSS
Trigger: AGAAGAAGGCCGAAGAACTCACTTCTCAGAACATTC...TGCAGAGCTATTTGGGTACCTCATTTTGTCCCTTGACTTTAGTGTAGTGGTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR TCA 90 bp CCCACCACTACACTAAAGTCAAGGGACAAAATGAGGTACCCAAATAGCTCTGCAAGTCAAGGGACAAAATaGGGTACCCAAATAGCTCTG +
Preference number: 4 (lower is better)
Translates to: PTTTLKSRDKMRYPNSSASQGTK*GTQIAL
Trigger: CAGAGCTATTTGGGTACCTCATTTTGTCCCTTGACT...TGCAGAGCTATTTGGGTACCTCATTTTGTCCCTTGACTTTAGTGTAGTGGTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR GCA 90 bp CTCCTGTCCAGACCAATGCATGGTTTTAGGGATACGACTAAAATGAAGACAAATTGCTGGGACCAGTTCTaGACTTTCCCTCTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: LLSRPMHGFRDTTKMKTNCWDQF*TFPLLF
Trigger: GAAGAGGAGAGGGAAAGTGCAGAACTGGTCCCAGCA...ATTTGTCTTCATTTTAGTCGTATCCCTAAAACCATGCATTGGTCTGGACAGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420353.7
CDS-3UTR CCA 90 bp AGCAATAACAAGGTAAGTGAAGTTACCTTTGACTATCAGAGAAGTTTCAGGGCACTGTCACCATGGTGCTaGCAGTACCCACCACCATTC +
Preference number: 4 (lower is better)
Translates to: SNNKVSEVTFDYQRSFRALSPWC*QYPPPF
Trigger: GAATGGTGGTGGGTACTGCCAGCACCATGGTGACAG...TGCCCTGAAACTTCTCTGATAGTCAAAGGTAACTTCACTTACCTTGTTATTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CCA 90 bp CTCCTGTCCAGACCAATGCATGGTTTTAGGGATACGACTAAAATGAAGACAAATCTGCCGTCGCTCATCTaGATCTTCATCTACTGTGCG +
Preference number: 4 (lower is better)
Translates to: LLSRPMHGFRDTTKMKTNLPSLI*IFIYCA
Trigger: CGCACAGTAGATGAAGATCCAGATGAGCGACGGCAG...ATTTGTCTTCATTTTAGTCGTATCCCTAAAACCATGCATTGGTCTGGACAGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420353.7
CDS-3UTR CCA 90 bp GCTCTGGGACAACTGGAAGGGTTTCATACGGAAAGGCAATTAAAGCTGACCTATATCTGGAAAGGCCTTTaGCTGTGGATGCATCAGAAA +
Preference number: 4 (lower is better)
Translates to: ALGQLEGFHTERQLKLTYIWKGL*LWMHQK
Trigger: TTTCTGATGCATCCACAGCCAAAGGCCTTTCCAGAT...ATAGGTCAGCTTTAATTGCCTTTCCGTATGAAACCCTTCCAGTTGTCCCAGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CCA 90 bp TTTGTTGGCCTCTCTAGTATTGTGGGAGGCTTTCTTAGACTTTTCAACTCTAAGGGCAGAAAGTGGCTCTaGGACAACTGGAAGGGTTTC +
Preference number: 4 (lower is better)
Translates to: FVGLSSIVGGFLRLFNSKGRKWL*DNWKGF
Trigger: GAAACCCTTCCAGTTGTCCCAGAGCCACTTTCTGCC...CTTAGAGTTGAAAAGTCTAAGAAAGCCTCCCACAATACTAGAGAGGCCAACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CCA 90 bp CCCACCACTACACTAAAGTCAAGGGACAAAATGAGGTACCCAAATAGCTCTGCAAGAGAAGGACATTCTTaGCTTGCACAGATGGCAGAA +
Preference number: 4 (lower is better)
Translates to: PTTTLKSRDKMRYPNSSAREGHS*LAQMAE
Trigger: TTCTGCCATCTGTGCAAGCCAAGAATGTCCTTCTCT...TGCAGAGCTATTTGGGTACCTCATTTTGTCCCTTGACTTTAGTGTAGTGGTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CCA 90 bp TTTGTTGGCCTCTCTAGTATTGTGGGAGGCTTTCTTAGACTTTTCAACTCTAAGTTGTCTTTAGGGGTGTaGCCTGTTCAGCACCAGCTC +
Preference number: 4 (lower is better)
Translates to: FVGLSSIVGGFLRLFNSKLSLGV*PVQHQL
Trigger: GAGCTGGTGCTGAACAGGCCACACCCCTAAAGACAA...CTTAGAGTTGAAAAGTCTAAGAAAGCCTCCCACAATACTAGAGAGGCCAACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CCA 90 bp AGTGACACCTTCCATGATGTTTGGTTCTGGTCCAGATGGATCTGGAAGACAAAGTGGTCCAGATGGATCTaGAAGACAAAGATTTGGGGA +
Preference number: 4 (lower is better)
Translates to: SDTFHDVWFWSRWIWKTKWSRWI*KTKIWG
Trigger: TCCCCAAATCTTTGTCTTCCAGATCCATCTGGACCA...CTTTGTCTTCCAGATCCATCTGGACCAGAACCAAACATCATGGAAGGTGTCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CCA 90 bp ATATTGCCATGTCCAAGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGGCTGCCTCTCTAGTATTGTaGGAGGCTTTCTTAGACTTT +
Preference number: 4 (lower is better)
Translates to: ILPCPRQMGGDKMTSLLAASLVL*EAFLDF
Trigger: AAAGTCTAAGAAAGCCTCCCACAATACTAGAGAGGC...AGCCAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCTTGGACATGGCAATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CCA 90 bp ATATTGCCATGTCCAAGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGGCTTCAATAAGTCTGGGATaGGGCCTGAGAATGTGTATT +
Preference number: 4 (lower is better)
Translates to: ILPCPRQMGGDKMTSLLASISLG*GLRMCI
Trigger: AATACACATTCTCAGGCCCCATCCCAGACTTATTGA...AGCCAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCTTGGACATGGCAATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420353.7
CDS-3UTR TCA 90 bp TTTGTTGGCCTCTCTAGTATTGTGGGAGGCTTTCTTAGACTTTTCAACTCTAAGTCATGCTTGTGTTTATaGACTGCCAGGTGGTCCTCG +
Preference number: 4 (lower is better)
Translates to: FVGLSSIVGGFLRLFNSKSCLCL*TARWSS
Trigger: CGAGGACCACCTGGCAGTTCATAAACACAAGCATGA...CTTAGAGTTGAAAAGTCTAAGAAAGCCTCCCACAATACTAGAGAGGCCAACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR TCA 90 bp AGTGTAGCTGAGAAGTCTGATCAGCTCAGAAAAGAGTGGAATTTGGCAACAAATTCATGCTTGTGTTTATaGACTGCCAGGTGGTCCTCG +
Preference number: 4 (lower is better)
Translates to: SVAEKSDQLRKEWNLATNSCLCL*TARWSS
Trigger: CGAGGACCACCTGGCAGTTCATAAACACAAGCATGA...ATTTGTTGCCAAATTCCACTCTTTTCTGAGCTGATCAGACTTCTCAGCTACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548118.6
ENST00000591397.1
CDS-3UTR TCA 90 bp CCCATATTGCCATGTCCAAGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGCACAAGTTACGGCTGTaGATTTTTAAAGGCAAAAGT +
Preference number: 4 (lower is better)
Translates to: PILPCPRQMGGDKMTSLLHKLRL*IFKGKS
Trigger: ACTTTTGCCTTTAAAAATTCACAGCCGTAACTTGTG...CAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCTTGGACATGGCAATATGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR TCA 90 bp TTTGTTGGCCTCTCTAGTATTGTGGGAGGCTTTCTTAGACTTTTCAACTCTAAGACAGGGATAGAGAAGTaGGCGAGAGGAGGTTCAGTT +
Preference number: 4 (lower is better)
Translates to: FVGLSSIVGGFLRLFNSKTGIEK*ARGGSV
Trigger: AACTGAACCTCCTCTCGCTCACTTCTCTATCCCTGT...CTTAGAGTTGAAAAGTCTAAGAAAGCCTCCCACAATACTAGAGAGGCCAACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR TCA 90 bp GCTCTGGGACAACTGGAAGGGTTTCATACGGAAAGGCAATTAAAGCTGACCTATAGTAGCTACTGCTGGTaGGATAACTCTGTGCTATTA +
Preference number: 4 (lower is better)
Translates to: ALGQLEGFHTERQLKLTYSSYCW*DNSVLL
Trigger: TAATAGCACAGAGTTATCTCACCAGCAGTAGCTACT...ATAGGTCAGCTTTAATTGCCTTTCCGTATGAAACCCTTCCAGTTGTCCCAGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420353.7
CDS-3UTR TCA 90 bp AGTGTAGCTGAGAAGTCTGATCAGCTCAGAAAAGAGTGGAATTTGGCAACAAATACGACAGACTTGTGCTaGTCCATCATCTGGAACTCC +
Preference number: 4 (lower is better)
Translates to: SVAEKSDQLRKEWNLATNTTDLC*SIIWNS
Trigger: GGAGTTCCAGATGATGGATCAGCACAAGTCTGTCGT...ATTTGTTGCCAAATTCCACTCTTTTCTGAGCTGATCAGACTTCTCAGCTACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548118.6
ENST00000591397.1
CDS-3UTR TCA 90 bp ACAAGAGGACTAATTTTCGGTGACGACAGACTTGTGCTGATCCATCATCTGGAAAGGACTAATTTTCGGTaGCGACAGACTTGTGCTGAT +
Preference number: 4 (lower is better)
Translates to: TRGLIFGDDRLVLIHHLERTNFR*RQTCAD
Trigger: ATCAGCACAAGTCTGTCGTCACCGAAAATTAGTCCT...TTCCAGATGATGGATCAGCACAAGTCTGTCGTCACCGAAAATTAGTCCTCTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000548118.6
ENST00000591397.1
CDS-3UTR GCA 90 bp AGCAATAACAAGGTAAGTGAAGTTACCTTTGACTATCAGAGAAGTTTCAGGGCACTGGATGTGGTAACCTaGGTCCTGACCATCTGCCAT +
Preference number: 4 (lower is better)
Translates to: SNNKVSEVTFDYQRSFRALDVVT*VLTICH
Trigger: ATGGCAGATGGTCAGGACGCAGGTTACCACATCCAG...TGCCCTGAAACTTCTCTGATAGTCAAAGGTAACTTCACTTACCTTGTTATTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR GCA 90 bp CTCCTGTCCAGACCAATGCATGGTTTTAGGGATACGACTAAAATGAAGACAAATGGGGTTCTGACCTGCTaGTTCCTTATTTCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: LLSRPMHGFRDTTKMKTNGVLTC*FLISVP
Trigger: TGGCACTGAAATAAGGAAGCAGCAGGTCAGAACCCC...ATTTGTCTTCATTTTAGTCGTATCCCTAAAACCATGCATTGGTCTGGACAGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000420353.7
CDS-3UTR CCA 90 bp AGCAATAACAAGGTAAGTGAAGTTACCTTTGACTATCAGAGAAGTTTCAGGGCATGGGGAGGGAAGGGTTaGATGAAGTGGATCATAGCC +
Preference number: 4 (lower is better)
Translates to: SNNKVSEVTFDYQRSFRAWGGKG*MKWIIA
Trigger: GGCTATGATCCACTTCATCCAACCCTTCCCTCCCCA...TGCCCTGAAACTTCTCTGATAGTCAAAGGTAACTTCACTTACCTTGTTATTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CCA 90 bp AGCAATAACAAGGTAAGTGAAGTTACCTTTGACTATCAGAGAAGTTTCAGGGCAGGATACCAGGAATGTTaGGCACCATGGACACAGGTC +
Preference number: 4 (lower is better)
Translates to: SNNKVSEVTFDYQRSFRAGYQEC*APWTQV
Trigger: GACCTGTGTCCATGGTGCCCAACATTCCTGGTATCC...TGCCCTGAAACTTCTCTGATAGTCAAAGGTAACTTCACTTACCTTGTTATTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CCA 90 bp AGCAATAACAAGGTAAGTGAAGTTACCTTTGACTATCAGAGAAGTTTCAGGGCACTGCCGTCGCTCATCTaGATCTTCATCTACTGTGCG +
Preference number: 4 (lower is better)
Translates to: SNNKVSEVTFDYQRSFRALPSLI*IFIYCA
Trigger: CGCACAGTAGATGAAGATCCAGATGAGCGACGGCAG...TGCCCTGAAACTTCTCTGATAGTCAAAGGTAACTTCACTTACCTTGTTATTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CCA 90 bp AGTGACACCTTCCATGATGTTTGGTTCTGGTCCAGATGGATCTGGAAGACAAAGACGTACATGACCACATaGCTAAAAAGCCCCATATCT +
Preference number: 4 (lower is better)
Translates to: SDTFHDVWFWSRWIWKTKTYMTT*LKSPIS
Trigger: AGATATGGGGCTTTTTAGCCATGTGGTCATGTACGT...CTTTGTCTTCCAGATCCATCTGGACCAGAACCAAACATCATGGAAGGTGTCACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CCA 90 bp TTTGTTGGCCTCTCTAGTATTGTGGGAGGCTTTCTTAGACTTTTCAACTCTAAGATTGTTCGGACCATCTaGAAAGGCCTTTGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: FVGLSSIVGGFLRLFNSKIVRTI*KGLWLW
Trigger: CCACAGCCAAAGGCCTTTCCAGATGGTCCGAACAAT...CTTAGAGTTGAAAAGTCTAAGAAAGCCTCCCACAATACTAGAGAGGCCAACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CCA 90 bp TTTGTTGGCCTCTCTAGTATTGTGGGAGGCTTTCTTAGACTTTTCAACTCTAAGCAGCCAGTCAGATTCTaGGCCCTTCCCTTTTCACTA +
Preference number: 4 (lower is better)
Translates to: FVGLSSIVGGFLRLFNSKQPVRF*ALPFSL
Trigger: TAGTGAAAAGGGAAGGGCCCAGAATCTGACTGGCTG...CTTAGAGTTGAAAAGTCTAAGAAAGCCTCCCACAATACTAGAGAGGCCAACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CCA 90 bp TTTGTTGGCCTCTCTAGTATTGTGGGAGGCTTTCTTAGACTTTTCAACTCTAAGACAGATGGCAGAAAGTaGCTCTGGGACAACTGGAAG +
Preference number: 4 (lower is better)
Translates to: FVGLSSIVGGFLRLFNSKTDGRK*LWDNWK
Trigger: CTTCCAGTTGTCCCAGAGCCACTTTCTGCCATCTGT...CTTAGAGTTGAAAAGTCTAAGAAAGCCTCCCACAATACTAGAGAGGCCAACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CCA 90 bp TTTGTTGGCCTCTCTAGTATTGTGGGAGGCTTTCTTAGACTTTTCAACTCTAAGAACACAGGGACAGACTaGCAGGGCATGTATGCAGTT +
Preference number: 4 (lower is better)
Translates to: FVGLSSIVGGFLRLFNSKNTGTD*QGMYAV
Trigger: AACTGCATACATGCCCTGCCAGTCTGTCCCTGTGTT...CTTAGAGTTGAAAAGTCTAAGAAAGCCTCCCACAATACTAGAGAGGCCAACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CCA 90 bp GCTCTGGGACAACTGGAAGGGTTTCATACGGAAAGGCAATTAAAGCTGACCTATGCCTCTCTAGTATTGTaGGAGGCTTTCTTAGACTTT +
Preference number: 4 (lower is better)
Translates to: ALGQLEGFHTERQLKLTYASLVL*EAFLDF
Trigger: AAAGTCTAAGAAAGCCTCCCACAATACTAGAGAGGC...ATAGGTCAGCTTTAATTGCCTTTCCGTATGAAACCCTTCCAGTTGTCCCAGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR TCA 90 bp ACAAGAGGACTAATTTTCGGTGACGACAGACTTGTGCTGATCCATCATCTGGAACATCTGCAGCTTTCTTaGATTCATGTTCAAAGGAGC +
Preference number: 4 (lower is better)
Translates to: TRGLIFGDDRLVLIHHLEHLQLS*IHVQRS
Trigger: GCTCCTTTGAACATGAATTCAAGAAAGCTGCAGATG...TTCCAGATGATGGATCAGCACAAGTCTGTCGTCACCGAAAATTAGTCCTCTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548118.6
ENST00000591397.1
CDS-3UTR TCA 90 bp AGCAATAACAAGGTAAGTGAAGTTACCTTTGACTATCAGAGAAGTTTCAGGGCATGGGAGGGGATAAGATaGCATCTCTCTTGGCTCTTG +
Preference number: 4 (lower is better)
Translates to: SNNKVSEVTFDYQRSFRAWEGIR*HLSWLL
Trigger: CAAGAGCCAAGAGAGATGTCATCTTATCCCCTCCCA...TGCCCTGAAACTTCTCTGATAGTCAAAGGTAACTTCACTTACCTTGTTATTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR TCA 90 bp AGCAATAACAAGGTAAGTGAAGTTACCTTTGACTATCAGAGAAGTTTCAGGGCAGGGAAGAGAGGGAACTaGGAAACCCCAAACCTAGAA +
Preference number: 4 (lower is better)
Translates to: SNNKVSEVTFDYQRSFRAGKRGN*ETPNLE
Trigger: TTCTAGGTTTGGGGTTTCTCAGTTCCCTCTCTTCCC...TGCCCTGAAACTTCTCTGATAGTCAAAGGTAACTTCACTTACCTTGTTATTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR TCA 90 bp AGCAATAACAAGGTAAGTGAAGTTACCTTTGACTATCAGAGAAGTTTCAGGGCAGGTGATGGGCACTTGTaGACAGAAGACTCTAGCTCA +
Preference number: 4 (lower is better)
Translates to: SNNKVSEVTFDYQRSFRAGDGHL*TEDSSS
Trigger: TGAGCTAGAGTCTTCTGTTCACAAGTGCCCATCACC...TGCCCTGAAACTTCTCTGATAGTCAAAGGTAACTTCACTTACCTTGTTATTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR GCA 90 bp ATATTGCCATGTCCAAGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGGCTGCTTCCTTATTTCAGTaGCATTTTGTTACTGTGGTT +
Preference number: 4 (lower is better)
Translates to: ILPCPRQMGGDKMTSLLAASLFQ*HFVTVV
Trigger: AACCACAGTAACAAAATGGCACTGAAATAAGGAAGC...AGCCAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCTTGGACATGGCAATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR GCA 90 bp ATATTGCCATGTCCAAGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGGCTAAGTCAGATTTGAGATaGATAACCAGCAGCAAAAGA +
Preference number: 4 (lower is better)
Translates to: ILPCPRQMGGDKMTSLLAKSDLR*ITSSKR
Trigger: TCTTTTGCTGCTGGTTATGCATCTCAAATCTGACTT...AGCCAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCTTGGACATGGCAATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CCA 90 bp AGTGACACCTTCCATGATGTTTGGTTCTGGTCCAGATGGATCTGGAAGACAAAGTTTGATTTTGATGTCTaGTGTGGAAGGCAGAGACAT +
Preference number: 4 (lower is better)
Translates to: SDTFHDVWFWSRWIWKTKFDFDV*CGRQRH
Trigger: ATGTCTCTGCCTTCCACACCAGACATCAAAATCAAA...CTTTGTCTTCCAGATCCATCTGGACCAGAACCAAACATCATGGAAGGTGTCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CCA 90 bp TTTGTTGGCCTCTCTAGTATTGTGGGAGGCTTTCTTAGACTTTTCAACTCTAAGAGTAGCTGTTTCAACTaGGCCACCTCATTGCGTAGT +
Preference number: 4 (lower is better)
Translates to: FVGLSSIVGGFLRLFNSKSSCFN*ATSLRS
Trigger: ACTACGCAATGAGGTGGCCCAGTTGAAACAGCTACT...CTTAGAGTTGAAAAGTCTAAGAAAGCCTCCCACAATACTAGAGAGGCCAACAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CCA 90 bp AGCAATAACAAGGTAAGTGAAGTTACCTTTGACTATCAGAGAAGTTTCAGGGCACCTCTAGAAACGCCATaGACTTTAGGAAGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: SNNKVSEVTFDYQRSFRAPLETP*TLGRAK
Trigger: CTTGGCCCTTCCTAAAGTCCATGGCGTTTCTAGAGG...TGCCCTGAAACTTCTCTGATAGTCAAAGGTAACTTCACTTACCTTGTTATTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CCA 90 bp CTCCTGTCCAGACCAATGCATGGTTTTAGGGATACGACTAAAATGAAGACAAATTTGGTGTCTGTTTGGTaGTTCAGGCTGTACATAGGG +
Preference number: 4 (lower is better)
Translates to: LLSRPMHGFRDTTKMKTNLVSVW*FRLYIG
Trigger: CCCTATGTACAGCCTGAACCACCAAACAGACACCAA...ATTTGTCTTCATTTTAGTCGTATCCCTAAAACCATGCATTGGTCTGGACAGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420353.7
CDS-3UTR CCA 90 bp GCTCTGGGACAACTGGAAGGGTTTCATACGGAAAGGCAATTAAAGCTGACCTATTTTTTGGTGTCTGTTTaGTGGTTCAGGCTGTACATA +
Preference number: 4 (lower is better)
Translates to: ALGQLEGFHTERQLKLTYFLVSV*WFRLYI
Trigger: TATGTACAGCCTGAACCACCAAACAGACACCAAAAA...ATAGGTCAGCTTTAATTGCCTTTCCGTATGAAACCCTTCCAGTTGTCCCAGAGC
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
3UTR CAA 72 bp TTTCAATCTTATACTCAAGTAAACCCACTCAGCATCTaGGCTATGACGCTTCAAGATCCTGGAGCACTGCAT +
Preference number: 4 (lower is better)
Translates to: FQSYTQVNPLSI*AMTLQDPGALH
Trigger: ATGCAGTGCTCCAGGATCTTGAAGCGTCATAGCCAAGATGCTGAGTGGGTTTACTTGAGTATAAGATTGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR TCA 90 bp AGTGTAGCTGAGAAGTCTGATCAGCTCAGAAAAGAGTGGAATTTGGCAACAAATAGGACTAATTTTCGGTaGCGACAGACTTGTGCTGAT +
Preference number: 4 (lower is better)
Translates to: SVAEKSDQLRKEWNLATNRTNFR*RQTCAD
Trigger: ATCAGCACAAGTCTGTCGTCACCGAAAATTAGTCCT...ATTTGTTGCCAAATTCCACTCTTTTCTGAGCTGATCAGACTTCTCAGCTACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000548118.6
ENST00000591397.1
CDS-3UTR GCA 90 bp AGTGTAGCTGAGAAGTCTGATCAGCTCAGAAAAGAGTGGAATTTGGCAACAAATCTTGTGTTTATGAACTaGCAGGTGGTCCTCGTTTGT +
Preference number: 4 (lower is better)
Translates to: SVAEKSDQLRKEWNLATNLVFMN*QVVLVC
Trigger: ACAAACGAGGACCACCTGGCAGTTCATAAACACAAG...ATTTGTTGCCAAATTCCACTCTTTTCTGAGCTGATCAGACTTCTCAGCTACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548118.6
ENST00000591397.1
CDS-3UTR GCA 90 bp AGCAATAACAAGGTAAGTGAAGTTACCTTTGACTATCAGAGAAGTTTCAGGGCAGCTTTAGGGCAAGGCTaGTACTGGGAAATCAAGACA +
Preference number: 4 (lower is better)
Translates to: SNNKVSEVTFDYQRSFRAALGQG*YWEIKT
Trigger: TGTCTTGATTTCCCAGTAGCAGCCTTGCCCTAAAGC...TGCCCTGAAACTTCTCTGATAGTCAAAGGTAACTTCACTTACCTTGTTATTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR GCA 90 bp AGTGACACCTTCCATGATGTTTGGTTCTGGTCCAGATGGATCTGGAAGACAAAGCTGGCAGGGCATGTATaGAGTTACAAATTAATTCTT +
Preference number: 4 (lower is better)
Translates to: SDTFHDVWFWSRWIWKTKLAGHV*SYKLIL
Trigger: AAGAATTAATTTGTAACTGCATACATGCCCTGCCAG...CTTTGTCTTCCAGATCCATCTGGACCAGAACCAAACATCATGGAAGGTGTCACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR GCA 90 bp GCTCTGGGACAACTGGAAGGGTTTCATACGGAAAGGCAATTAAAGCTGACCTATAAGTCAGATTTGAGATaGATAACCAGCAGCAAAAGA +
Preference number: 4 (lower is better)
Translates to: ALGQLEGFHTERQLKLTYKSDLR*ITSSKR
Trigger: TCTTTTGCTGCTGGTTATGCATCTCAAATCTGACTT...ATAGGTCAGCTTTAATTGCCTTTCCGTATGAAACCCTTCCAGTTGTCCCAGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CCA 90 bp AGCAATAACAAGGTAAGTGAAGTTACCTTTGACTATCAGAGAAGTTTCAGGGCAGCCATTTTGTTACTGTaGTTCTGGCAGTGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: SNNKVSEVTFDYQRSFRAAILLL*FWQCSS
Trigger: TGAGGAGCACTGCCAGAACCACAGTAACAAAATGGC...TGCCCTGAAACTTCTCTGATAGTCAAAGGTAACTTCACTTACCTTGTTATTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR TCA 90 bp AGTGTAGCTGAGAAGTCTGATCAGCTCAGAAAAGAGTGGAATTTGGCAACAAATCATCTGCAGCTTTCTTaGATTCATGTTCAAAGGAGC +
Preference number: 4 (lower is better)
Translates to: SVAEKSDQLRKEWNLATNHLQLS*IHVQRS
Trigger: GCTCCTTTGAACATGAATTCAAGAAAGCTGCAGATG...ATTTGTTGCCAAATTCCACTCTTTTCTGAGCTGATCAGACTTCTCAGCTACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548118.6
ENST00000591397.1
CDS-3UTR TCA 90 bp AGCAATAACAAGGTAAGTGAAGTTACCTTTGACTATCAGAGAAGTTTCAGGGCAAATAAGGCCACAAAATaGGGTTGCCAAGGCTTAGTG +
Preference number: 4 (lower is better)
Translates to: SNNKVSEVTFDYQRSFRANKATK*GCQGLV
Trigger: CACTAAGCCTTGGCAACCTCATTTTGTGGCCTTATT...TGCCCTGAAACTTCTCTGATAGTCAAAGGTAACTTCACTTACCTTGTTATTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CCA 90 bp GCTCTGGGACAACTGGAAGGGTTTCATACGGAAAGGCAATTAAAGCTGACCTATGATGACAATATGCTTTaGCCGGTAAACTCTTATAAA +
Preference number: 4 (lower is better)
Translates to: ALGQLEGFHTERQLKLTYDDNML*PVNSYK
Trigger: TTTATAAGAGTTTACCGGCCAAAGCATATTGTCATC...ATAGGTCAGCTTTAATTGCCTTTCCGTATGAAACCCTTCCAGTTGTCCCAGAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CCA 90 bp CCCACCACTACACTAAAGTCAAGGGACAAAATGAGGTACCCAAATAGCTCTGCAGATGACAATATGCTTTaGCCGGTAAACTCTTATAAA +
Preference number: 4 (lower is better)
Translates to: PTTTLKSRDKMRYPNSSADDNML*PVNSYK
Trigger: TTTATAAGAGTTTACCGGCCAAAGCATATTGTCATC...TGCAGAGCTATTTGGGTACCTCATTTTGTCCCTTGACTTTAGTGTAGTGGTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CCA 90 bp ACAAGAGGACTAATTTTCGGTGACGACAGACTTGTGCTGATCCATCATCTGGAAAAACTAATACTCCCCTaGAAGAACAAGAGGACTAAT +
Preference number: 4 (lower is better)
Translates to: TRGLIFGDDRLVLIHHLEKLILP*KNKRTN
Trigger: ATTAGTCCTCTTGTTCTTCCAGGGGAGTATTAGTTT...TTCCAGATGATGGATCAGCACAAGTCTGTCGTCACCGAAAATTAGTCCTCTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000548118.6
ENST00000591397.1
CDS-3UTR CCA 90 bp ACAAGAGGACTAATTTTCGGTGACGACAGACTTGTGCTGATCCATCATCTGGAACAGCTCAGAAAAGAGTaGAATTTGGCAACAAATATG +
Preference number: 4 (lower is better)
Translates to: TRGLIFGDDRLVLIHHLEQLRKE*NLATNM
Trigger: CATATTTGTTGCCAAATTCCACTCTTTTCTGAGCTG...TTCCAGATGATGGATCAGCACAAGTCTGTCGTCACCGAAAATTAGTCCTCTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000548118.6
ENST00000591397.1
CDS-3UTR TCA 90 bp AGCAATAACAAGGTAAGTGAAGTTACCTTTGACTATCAGAGAAGTTTCAGGGCACATCTGCAGCTTTCTTaGATTCATGTTCAAAGGAGC +
Preference number: 4 (lower is better)
Translates to: SNNKVSEVTFDYQRSFRAHLQLS*IHVQRS
Trigger: GCTCCTTTGAACATGAATTCAAGAAAGCTGCAGATG...TGCCCTGAAACTTCTCTGATAGTCAAAGGTAACTTCACTTACCTTGTTATTGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR TCA 90 bp CTCCTGTCCAGACCAATGCATGGTTTTAGGGATACGACTAAAATGAAGACAAATGGCAAAAGATGTATTTaGAATATCCTCCACACCTGT +
Preference number: 4 (lower is better)
Translates to: LLSRPMHGFRDTTKMKTNGKRCI*NILHTC
Trigger: ACAGGTGTGGAGGATATTTCAAATACATCTTTTGCC...ATTTGTCTTCATTTTAGTCGTATCCCTAAAACCATGCATTGGTCTGGACAGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000420353.7
CDS-3UTR GCA 90 bp CTCCTGTCCAGACCAATGCATGGTTTTAGGGATACGACTAAAATGAAGACAAATTCTCAACCTTTAGTGTaGATTAGAATCACTTGGAGT +
Preference number: 4 (lower is better)
Translates to: LLSRPMHGFRDTTKMKTNSQPLV*IRITWS
Trigger: ACTCCAAGTGATTCTAATGCACACTAAAGGTTGAGA...ATTTGTCTTCATTTTAGTCGTATCCCTAAAACCATGCATTGGTCTGGACAGGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420353.7
CDS-3UTR CCA 90 bp AGCAATAACAAGGTAAGTGAAGTTACCTTTGACTATCAGAGAAGTTTCAGGGCATGCATTAGAATCACTTaGAGTGCTTTTAAACCCTGC +
Preference number: 4 (lower is better)
Translates to: SNNKVSEVTFDYQRSFRACIRIT*SAFKPC
Trigger: GCAGGGTTTAAAAGCACTCCAAGTGATTCTAATGCA...TGCCCTGAAACTTCTCTGATAGTCAAAGGTAACTTCACTTACCTTGTTATTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420353.7
CDS-3UTR CCA 90 bp AGTGTAGCTGAGAAGTCTGATCAGCTCAGAAAAGAGTGGAATTTGGCAACAAATCAGCTCAGAAAAGAGTaGAATTTGGCAACAAATATG +
Preference number: 4 (lower is better)
Translates to: SVAEKSDQLRKEWNLATNQLRKE*NLATNM
Trigger: CATATTTGTTGCCAAATTCCACTCTTTTCTGAGCTG...ATTTGTTGCCAAATTCCACTCTTTTCTGAGCTGATCAGACTTCTCAGCTACACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000548118.6
ENST00000591397.1
CDS-3UTR CAA 90 bp GGGGTAGAACAAAGGAACTCGAGAGTCCCCTACATGACAGCCTCCAGGAGGGCTCGGCTGGTAGCTCCGTaGCCTCCCGCCTGCCCGCGC +
Preference number: 5 (lower is better)
Translates to: GVEQRNSRVPYMTASRRARLVAP*PPACPR
Trigger: GCGCGGGCAGGCGGGAGGCAACGGAGCTACCAGCCG...AGCCCTCCTGGAGGCTGTCATGTAGGGGACTCTCGAGTTCCTTTGTTCTACCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420353.7
CDS GCA 90 bp CCCACAGCTTTCGCTTTTGGCGGCAGCGGGAGGCTGCAGCCCGGTTaGGCTCCAGAAAGCGCTGCCGTCGCTCATCTGGATCTTCATCTA +
Preference number: 5 (lower is better)
Translates to: PTAFAFGGSGRLQPG*APESAAVAHLDLHL
Trigger: TAGATGAAGATCCAGATGAGCGACGGCAGCGCTTTCTGGAGCGCAACCGGGCTGCAGCCTCCCGCTGCCGCCAAAAGCGAAAGCTGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000420353.7
ENST00000456903.8
ENST00000546661.1
ENST00000548446.6
CDS-3UTR CAA 90 bp GGGGTAGAACAAAGGAACTCGAGAGTCCCCTACATGACAGCCTCCAGGAGGGCTGAGGCTGCAGCCCGGTaGCGCTCCAGAAAGCGCTGC +
Preference number: 5 (lower is better)
Translates to: GVEQRNSRVPYMTASRRAEAAAR*RSRKRC
Trigger: GCAGCGCTTTCTGGAGCGCAACCGGGCTGCAGCCTC...AGCCCTCCTGGAGGCTGTCATGTAGGGGACTCTCGAGTTCCTTTGTTCTACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CAA 90 bp AGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGGCTCTTGGGCGGGCGAGCCCACAGCTTTCGCTTTaGGCGGCAGCGGGAGGCTGC +
Preference number: 5 (lower is better)
Translates to: RQMGGDKMTSLLALGRASPQLSL*AAAGGC
Trigger: GCAGCCTCCCGCTGCCGCCAAAAGCGAAAGCTGTGG...GCTCGCCCGCCCAAGAGCCAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420353.7
ENST00000456903.8
ENST00000548446.6
CDS-3UTR CAA 90 bp AGGATGACCAGGCCTGGTCCTCTGTGCCTGGGGCTGGCAGTCAGGGCAACACAGAAGATGACATCTCTCTaGGCTCTTGGGCGGGCGAGC +
Preference number: 5 (lower is better)
Translates to: RMTRPGPLCLGLAVRATQKMTSL*ALGRAS
Trigger: GCTCGCCCGCCCAAGAGCCAAGAGAGATGTCATCTT...CTGTGTTGCCCTGACTGCCAGCCCCAGGCACAGAGGACCAGGCCTGGTCATCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548446.6
CDS-3UTR CAA 90 bp CCCATATTGCCATGTCCAAGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGCGGCTGGTAGCTCCGTaGCCTCCCGCCTGCCCGCGC +
Preference number: 5 (lower is better)
Translates to: PILPCPRQMGGDKMTSLLRLVAP*PPACPR
Trigger: GCGCGGGCAGGCGGGAGGCAACGGAGCTACCAGCCG...CAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCTTGGACATGGCAATATGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000548446.6
CDS-3UTR CAA 90 bp AGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGGCTCTTGGGCGGGCGAGCCCTCCCTCTGTGGCCTaGGGTACGTGGCAGCTAGCT +
Preference number: 5 (lower is better)
Translates to: RQMGGDKMTSLLALGRASPPSVA*GTWQLA
Trigger: AGCTAGCTGCCACGTACCCAAGGCCACAGAGGGAGG...GCTCGCCCGCCCAAGAGCCAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CAA 90 bp GGGGTAGAACAAAGGAACTCGAGAGTCCCCTACATGACAGCCTCCAGGAGGGCTCCACAGCCCGGGGCATaGCACACAAACGGTCTGTCG +
Preference number: 5 (lower is better)
Translates to: GVEQRNSRVPYMTASRRAPQPGA*HTNGLS
Trigger: CGACAGACCGTTTGTGTGCAATGCCCCGGGCTGTGG...AGCCCTCCTGGAGGCTGTCATGTAGGGGACTCTCGAGTTCCTTTGTTCTACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CAA 90 bp AGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGGCTCTTGGGCGGGCGAGCCGAACACTGAGGCCATaGCTAGGGGCTGTTGCTGAG +
Preference number: 5 (lower is better)
Translates to: RQMGGDKMTSLLALGRASRTLRP*LGAVAE
Trigger: CTCAGCAACAGCCCCTAGCAATGGCCTCAGTGTTCG...GCTCGCCCGCCCAAGAGCCAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420353.7
ENST00000456903.8
ENST00000548446.6
CDS-3UTR CAA 90 bp GGAAAGGAAGACAGTATGGTTAGGGAGAATAGAGCGAAGCCCCTGCCTCAGCCCCCTCCCTCTGTGGCCTaGGGTACGTGGCAGCTAGCT +
Preference number: 5 (lower is better)
Translates to: GKEDSMVRENRAKPLPQPPPSVA*GTWQLA
Trigger: AGCTAGCTGCCACGTACCCAAGGCCACAGAGGGAGG...GGGCTGAGGCAGGGGCTTCGCTCTATTCTCCCTAACCATACTGTCTTCCTTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420353.7
CDS-3UTR CAA 90 bp AGGATGACCAGGCCTGGTCCTCTGTGCCTGGGGCTGGCAGTCAGGGCAACACAGGCAGCCACCAGTTTTTaGGCAACAGTCCTGCTTCTT +
Preference number: 5 (lower is better)
Translates to: RMTRPGPLCLGLAVRATQAATSF*ATVLLL
Trigger: AAGAAGCAGGACTGTTGCCAAAAAACTGGTGGCTGC...CTGTGTTGCCCTGACTGCCAGCCCCAGGCACAGAGGACCAGGCCTGGTCATCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548446.6
CDS-3UTR CAA 90 bp ACAAGAGGACTAATTTTCGGTGACGACAGACTTGTGCTGATCCATCATCTGGAACGGCTGGTAGCTCCGTaGCCTCCCGCCTGCCCGCGC +
Preference number: 5 (lower is better)
Translates to: TRGLIFGDDRLVLIHHLERLVAP*PPACPR
Trigger: GCGCGGGCAGGCGGGAGGCAACGGAGCTACCAGCCG...TTCCAGATGATGGATCAGCACAAGTCTGTCGTCACCGAAAATTAGTCCTCTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591397.1
CDS-3UTR CAA 90 bp GGGGTAGAACAAAGGAACTCGAGAGTCCCCTACATGACAGCCTCCAGGAGGGCTGACCCCATTTGCCTGTaGGATGGTGGAGCCTGTGTG +
Preference number: 5 (lower is better)
Translates to: GVEQRNSRVPYMTASRRADPICL*DGGACV
Trigger: CACACAGGCTCCACCATCCAACAGGCAAATGGGGTC...AGCCCTCCTGGAGGCTGTCATGTAGGGGACTCTCGAGTTCCTTTGTTCTACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CAA 90 bp AGGATGACCAGGCCTGGTCCTCTGTGCCTGGGGCTGGCAGTCAGGGCAACACAGGCTTTCAGTCTCATCTaGGCTTCTGATGGTATAGGG +
Preference number: 5 (lower is better)
Translates to: RMTRPGPLCLGLAVRATQAFSLI*ASDGIG
Trigger: CCCTATACCATCAGAAGCCAAGATGAGACTGAAAGC...CTGTGTTGCCCTGACTGCCAGCCCCAGGCACAGAGGACCAGGCCTGGTCATCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548446.6
CDS-3UTR CAA 90 bp AGGATGACCAGGCCTGGTCCTCTGTGCCTGGGGCTGGCAGTCAGGGCAACACAGAACTGGGCCACCTCATaGCGTAGTAATGTGACTTCA +
Preference number: 5 (lower is better)
Translates to: RMTRPGPLCLGLAVRATQNWATS*RSNVTS
Trigger: TGAAGTCACATTACTACGCAATGAGGTGGCCCAGTT...CTGTGTTGCCCTGACTGCCAGCCCCAGGCACAGAGGACCAGGCCTGGTCATCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548446.6
CDS-3UTR CAA 90 bp GGGGTAGAACAAAGGAACTCGAGAGTCCCCTACATGACAGCCTCCAGGAGGGCTAGAACCTGGGGTCCTTaGCTGGGACCAGTTCTGCAC +
Preference number: 5 (lower is better)
Translates to: GVEQRNSRVPYMTASRRARTWGP*LGPVLH
Trigger: GTGCAGAACTGGTCCCAGCAAAGGACCCCAGGTTCT...AGCCCTCCTGGAGGCTGTCATGTAGGGGACTCTCGAGTTCCTTTGTTCTACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CAA 90 bp GAGTGCTTGTGTATCGAGCACTCACATTGGAGTGGGGTGGGAAGCCTGAGTCCTTGGCAGCCTCCACTCTaGGGGCTGGAAGCTCATCTC +
Preference number: 5 (lower is better)
Translates to: ECLCIEHSHWSGVGSLSPWQPPL*GLEAHL
Trigger: GAGATGAGCTTCCAGCCCCAAGAGTGGAGGCTGCCA...AGGACTCAGGCTTCCCACCCCACTCCAATGTGAGTGCTCGATACACAAGCACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420353.7
CDS-3UTR CAA 90 bp AGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGGCTCTTGGGCGGGCGAGCTTGGGGAGGGAAGGGTaGGATGAAGTGGATCATAGC +
Preference number: 5 (lower is better)
Translates to: RQMGGDKMTSLLALGRASLGREG*DEVDHS
Trigger: GCTATGATCCACTTCATCCAACCCTTCCCTCCCCAA...GCTCGCCCGCCCAAGAGCCAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420353.7
ENST00000456903.8
ENST00000548446.6
CDS-3UTR CAA 90 bp GGGGTAGAACAAAGGAACTCGAGAGTCCCCTACATGACAGCCTCCAGGAGGGCTGGGATACCAGGAATGTaGGGCACCATGGACACAGGT +
Preference number: 5 (lower is better)
Translates to: GVEQRNSRVPYMTASRRAGIPGM*GTMDTG
Trigger: ACCTGTGTCCATGGTGCCCAACATTCCTGGTATCCC...AGCCCTCCTGGAGGCTGTCATGTAGGGGACTCTCGAGTTCCTTTGTTCTACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CAA 90 bp ATATTGCCATGTCCAAGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGGCTGAGGCTGCAGCCCGGTaGCGCTCCAGAAAGCGCTGC +
Preference number: 5 (lower is better)
Translates to: ILPCPRQMGGDKMTSLLAEAAAR*RSRKRC
Trigger: GCAGCGCTTTCTGGAGCGCAACCGGGCTGCAGCCTC...AGCCAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCTTGGACATGGCAATAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420353.7
ENST00000456903.8
ENST00000548446.6
CDS-3UTR CAA 90 bp CCCATATTGCCATGTCCAAGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGCCACAGCTTTCGCTTTaGGCGGCAGCGGGAGGCTGC +
Preference number: 5 (lower is better)
Translates to: PILPCPRQMGGDKMTSLLPQLSL*AAAGGC
Trigger: GCAGCCTCCCGCTGCCGCCAAAAGCGAAAGCTGTGG...CAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCTTGGACATGGCAATATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420353.7
ENST00000456903.8
ENST00000548446.6
CDS-3UTR CAA 90 bp AGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGGCTCTTGGGCGGGCGAGCGTACATAGGGCACGGTaGGGGTTAAGCACTCCATCT +
Preference number: 5 (lower is better)
Translates to: RQMGGDKMTSLLALGRASVHRAR*GLSTPS
Trigger: AGATGGAGTGCTTAACCCCAACCGTGCCCTATGTAC...GCTCGCCCGCCCAAGAGCCAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS CCA 90 bp TGGTATAGGGTGGCCAGAGGGAGAAATGGAGCCACTACTGTTAACTaGTGGGCCAGGGATACCAGGAATGTTGGGCACCATGGACACAGG +
Preference number: 5 (lower is better)
Translates to: WYRVARGRNGATTVN*WARDTRNVGHHGHR
Trigger: CCTGTGTCCATGGTGCCCAACATTCCTGGTATCCCTGGCCCACCAGTTAACAGTAGTGGCTCCATTTCTCCCTCTGGCCACCCTATACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420353.7
ENST00000456903.8
ENST00000548446.6
CDS-3UTR CAA 90 bp ATATTGCCATGTCCAAGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGGCTCCACAGCTTTCGCTTTaGGCGGCAGCGGGAGGCTGC +
Preference number: 5 (lower is better)
Translates to: ILPCPRQMGGDKMTSLLAPQLSL*AAAGGC
Trigger: GCAGCCTCCCGCTGCCGCCAAAAGCGAAAGCTGTGG...AGCCAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCTTGGACATGGCAATAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420353.7
ENST00000456903.8
ENST00000548446.6
CDS-3UTR CAA 90 bp GAGTGCTTGTGTATCGAGCACTCACATTGGAGTGGGGTGGGAAGCCTGAGTCCTTATCGAGCACTCACATaGGAGTGGGGTGGGAAGCCT +
Preference number: 5 (lower is better)
Translates to: ECLCIEHSHWSGVGSLSPYRALT*EWGGKP
Trigger: AGGCTTCCCACCCCACTCCAATGTGAGTGCTCGATA...AGGACTCAGGCTTCCCACCCCACTCCAATGTGAGTGCTCGATACACAAGCACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS TCA 90 bp ACCAGAGGAGGCATCATCTGCCCGCAGACTGGGACTGTGGGGTCATaGTTACATGCGATTGTATCGGCATGCTCAGTTCTGTCCTTTGGC +
Preference number: 5 (lower is better)
Translates to: TRGGIICPQTGTVGS*LHAIVSACSVLSFG
Trigger: GCCAAAGGACAGAACTGAGCATGCCGATACAATCGCATGTAATCATGACCCCACAGTCCCAGTCTGCGGGCAGATGATGCCTCCTCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000420353.7
ENST00000456903.8
ENST00000546661.1
ENST00000548446.6
ENST00000551087.1
CDS GCA 90 bp AGGCATCATCTGCCCGCAGACTGGGACTGTGGGGTCATGATTACATaGGATTGTATCGGCATGCTCAGTTCTGTCCTTTGGCTGGCCATC +
Preference number: 5 (lower is better)
Translates to: RHHLPADWDCGVMIT*DCIGMLSSVLWLAI
Trigger: GATGGCCAGCCAAAGGACAGAACTGAGCATGCCGATACAATCGCATGTAATCATGACCCCACAGTCCCAGTCTGCGGGCAGATGATGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000420353.7
ENST00000456903.8
ENST00000546661.1
ENST00000548446.6
ENST00000551087.1
CDS CCA 90 bp TATAGGGTGGCCAGAGGGAGAAATGGAGCCACTACTGTTAACTGGTaGGCCAGGGATACCAGGAATGTTGGGCACCATGGACACAGGTCT +
Preference number: 5 (lower is better)
Translates to: YRVARGRNGATTVNW*ARDTRNVGHHGHRS
Trigger: AGACCTGTGTCCATGGTGCCCAACATTCCTGGTATCCCTGGCCCACCAGTTAACAGTAGTGGCTCCATTTCTCCCTCTGGCCACCCTATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420353.7
ENST00000456903.8
ENST00000548446.6
CDS CCA 90 bp ACCTCTCCACCAGAGGAGGCATCATCTGCCCGCAGACTGGGACTGTaGGGTCATGATTACATGCGATTGTATCGGCATGCTCAGTTCTGT +
Preference number: 5 (lower is better)
Translates to: TSPPEEASSARRLGL*GHDYMRLYRHAQFC
Trigger: ACAGAACTGAGCATGCCGATACAATCGCATGTAATCATGACCCCACAGTCCCAGTCTGCGGGCAGATGATGCCTCCTCTGGTGGAGAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420353.7
ENST00000456903.8
ENST00000546661.1
ENST00000548446.6
ENST00000551087.1
CDS-3UTR CAA 90 bp AGGATGACCAGGCCTGGTCCTCTGTGCCTGGGGCTGGCAGTCAGGGCAACACAGTCATCTGCAGCTTTCTaGAATTCATGTTCAAAGGAG +
Preference number: 5 (lower is better)
Translates to: RMTRPGPLCLGLAVRATQSSAAF*NSCSKE
Trigger: CTCCTTTGAACATGAATTCAAGAAAGCTGCAGATGA...CTGTGTTGCCCTGACTGCCAGCCCCAGGCACAGAGGACCAGGCCTGGTCATCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548446.6
CDS-3UTR CAA 90 bp GAGTGCTTGTGTATCGAGCACTCACATTGGAGTGGGGTGGGAAGCCTGAGTCCTTTGGGGAGGGAAGGGTaGGATGAAGTGGATCATAGC +
Preference number: 5 (lower is better)
Translates to: ECLCIEHSHWSGVGSLSPLGREG*DEVDHS
Trigger: GCTATGATCCACTTCATCCAACCCTTCCCTCCCCAA...AGGACTCAGGCTTCCCACCCCACTCCAATGTGAGTGCTCGATACACAAGCACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CAA 90 bp CCACCCATATTGCCATGTCCAAGGCAGATGGGAGGGGATAAGATGACATCTCTCAGTGGGAGACCCCATTaGCCTGTTGGATGGTGGAGC +
Preference number: 5 (lower is better)
Translates to: PPILPCPRQMGGDKMTSLSGRPH*PVGWWS
Trigger: GCTCCACCATCCAACAGGCAAATGGGGTCTCCCACT...GAGAGATGTCATCTTATCCCCTCCCATCTGCCTTGGACATGGCAATATGGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420353.7
ENST00000456903.8
ENST00000548446.6
CDS-3UTR CAA 90 bp CTCTGCTTGTGTGCCTCTTGGAGGCTACTCAGATTTGCAACACACAATTCCCCCAGTGGGAGACCCCATTaGCCTGTTGGATGGTGGAGC +
Preference number: 5 (lower is better)
Translates to: LCLCASWRLLRFATHNSPSGRPH*PVGWWS
Trigger: GCTCCACCATCCAACAGGCAAATGGGGTCTCCCACT...GGGGGAATTGTGTGTTGCAAATCTGAGTAGCCTCCAAGAGGCACACAAGCAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548446.6
CDS-3UTR CAA 90 bp AGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGGCTCTTGGGCGGGCGAGCAACTGGGCCACCTCATaGCGTAGTAATGTGACTTCA +
Preference number: 5 (lower is better)
Translates to: RQMGGDKMTSLLALGRASNWATS*RSNVTS
Trigger: TGAAGTCACATTACTACGCAATGAGGTGGCCCAGTT...GCTCGCCCGCCCAAGAGCCAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420353.7
ENST00000456903.8
ENST00000548446.6
CDS-3UTR CAA 90 bp CCCATATTGCCATGTCCAAGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGGGGCTGGAGAACCCGTaGGCTCTGAGCTTTCCTTGG +
Preference number: 5 (lower is better)
Translates to: PILPCPRQMGGDKMTSLLGLENP*ALSFPW
Trigger: CCAAGGAAAGCTCAGAGCCAACGGGTTCTCCAGCCC...CAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCTTGGACATGGCAATATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420353.7
ENST00000456903.8
ENST00000548446.6
CDS-3UTR CAA 90 bp CCACCCATATTGCCATGTCCAAGGCAGATGGGAGGGGATAAGATGACATCTCTCCGAACACTGAGGCCATaGCTAGGGGCTGTTGCTGAG +
Preference number: 5 (lower is better)
Translates to: PPILPCPRQMGGDKMTSLRTLRP*LGAVAE
Trigger: CTCAGCAACAGCCCCTAGCAATGGCCTCAGTGTTCG...GAGAGATGTCATCTTATCCCCTCCCATCTGCCTTGGACATGGCAATATGGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420353.7
ENST00000456903.8
ENST00000548446.6
CDS-3UTR CAA 90 bp GACACCCACCATACACTCAGCTCCTTTCTGAAAGTGTCCTCCCTTAGGCCTCTAAAGATGACATCTCTCTaGGCTCTTGGGCGGGCGAGC +
Preference number: 5 (lower is better)
Translates to: DTHHTLSSFLKVSSLRPLKMTSL*ALGRAS
Trigger: GCTCGCCCGCCCAAGAGCCAAGAGAGATGTCATCTT...TAGAGGCCTAAGGGAGGACACTTTCAGAAAGGAGCTGAGTGTATGGTGGGTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CAA 90 bp AGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGGCTCTTGGGCGGGCGAGCAACCCACTCAGCATCTaGGCTATGACGCTTCAAGAT +
Preference number: 5 (lower is better)
Translates to: RQMGGDKMTSLLALGRASNPLSI*AMTLQD
Trigger: ATCTTGAAGCGTCATAGCCAAGATGCTGAGTGGGTT...GCTCGCCCGCCCAAGAGCCAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CAA 90 bp CCAGTCCCAGGAGATTGTGAGAACCAGCTCACAGGGATCATGCTGAATCAGGTGTATCGAGCACTCACATaGGAGTGGGGTGGGAAGCCT +
Preference number: 5 (lower is better)
Translates to: PVPGDCENQLTGIMLNQVYRALT*EWGGKP
Trigger: AGGCTTCCCACCCCACTCCAATGTGAGTGCTCGATA...CACCTGATTCAGCATGATCCCTGTGAGCTGGTTCTCACAATCTCCTGGGACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420353.7
CDS-3UTR CAA 90 bp CTCTGCTTGTGTGCCTCTTGGAGGCTACTCAGATTTGCAACACACAATTCCCCCCAGCCCATCCTCTGCTaGTGTGCCTCTTGGAGGCTA +
Preference number: 5 (lower is better)
Translates to: LCLCASWRLLRFATHNSPQPILC*CASWRL
Trigger: TAGCCTCCAAGAGGCACACAAGCAGAGGATGGGCTG...GGGGGAATTGTGTGTTGCAAATCTGAGTAGCCTCCAAGAGGCACACAAGCAGAG
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000548446.6
CDS-3UTR CAA 90 bp CCCACCACTACACTAAAGTCAAGGGACAAAATGAGGTACCCAAATAGCTCTGCACCACAGCCCGGGGCATaGCACACAAACGGTCTGTCG +
Preference number: 5 (lower is better)
Translates to: PTTTLKSRDKMRYPNSSAPQPGA*HTNGLS
Trigger: CGACAGACCGTTTGTGTGCAATGCCCCGGGCTGTGG...TGCAGAGCTATTTGGGTACCTCATTTTGTCCCTTGACTTTAGTGTAGTGGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CAA 90 bp CCCATATTGCCATGTCCAAGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGGACCCCATTTGCCTGTaGGATGGTGGAGCCTGTGTG +
Preference number: 5 (lower is better)
Translates to: PILPCPRQMGGDKMTSLLDPICL*DGGACV
Trigger: CACACAGGCTCCACCATCCAACAGGCAAATGGGGTC...CAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCTTGGACATGGCAATATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420353.7
ENST00000456903.8
ENST00000548446.6
CDS-3UTR CAA 90 bp GACACCCACCATACACTCAGCTCCTTTCTGAAAGTGTCCTCCCTTAGGCCTCTAGGGATACCAGGAATGTaGGGCACCATGGACACAGGT +
Preference number: 5 (lower is better)
Translates to: DTHHTLSSFLKVSSLRPLGIPGM*GTMDTG
Trigger: ACCTGTGTCCATGGTGCCCAACATTCCTGGTATCCC...TAGAGGCCTAAGGGAGGACACTTTCAGAAAGGAGCTGAGTGTATGGTGGGTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CAA 90 bp CCACCCATATTGCCATGTCCAAGGCAGATGGGAGGGGATAAGATGACATCTCTCGGGATACCAGGAATGTaGGGCACCATGGACACAGGT +
Preference number: 5 (lower is better)
Translates to: PPILPCPRQMGGDKMTSLGIPGM*GTMDTG
Trigger: ACCTGTGTCCATGGTGCCCAACATTCCTGGTATCCC...GAGAGATGTCATCTTATCCCCTCCCATCTGCCTTGGACATGGCAATATGGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420353.7
ENST00000456903.8
ENST00000548446.6
CDS-3UTR CAA 90 bp AGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGGCTCTTGGGCGGGCGAGCACCGAGTTGAGTTCCTaGATAAGATGGAGAGGTGTT +
Preference number: 5 (lower is better)
Translates to: RQMGGDKMTSLLALGRASTELSS*IRWRGV
Trigger: AACACCTCTCCATCTTATCAAGGAACTCAACTCGGT...GCTCGCCCGCCCAAGAGCCAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420353.7
CDS CCA 90 bp GTTAGGGTGGCTTTCAGTCTCATCTTGGCTTCTGATGGTATAGGGTaGCCAGAGGGAGAAATGGAGCCACTACTGTTAACTGGTGGGCCA +
Preference number: 5 (lower is better)
Translates to: VRVAFSLILASDGIG*PEGEMEPLLLTGGP
Trigger: TGGCCCACCAGTTAACAGTAGTGGCTCCATTTCTCCCTCTGGCCACCCTATACCATCAGAAGCCAAGATGAGACTGAAAGCCACCCTAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420353.7
ENST00000456903.8
ENST00000548446.6
CDS-3UTR CAA 90 bp CCACCCATATTGCCATGTCCAAGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGGGGAGGGAAGGGTaGGATGAAGTGGATCATAGC +
Preference number: 5 (lower is better)
Translates to: PPILPCPRQMGGDKMTSLLGREG*DEVDHS
Trigger: GCTATGATCCACTTCATCCAACCCTTCCCTCCCCAA...GAGAGATGTCATCTTATCCCCTCCCATCTGCCTTGGACATGGCAATATGGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420353.7
ENST00000456903.8
ENST00000548446.6
CDS-3UTR CAA 90 bp ATATTGCCATGTCCAAGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGGCTAGTGGGAGACCCCATTaGCCTGTTGGATGGTGGAGC +
Preference number: 5 (lower is better)
Translates to: ILPCPRQMGGDKMTSLLASGRPH*PVGWWS
Trigger: GCTCCACCATCCAACAGGCAAATGGGGTCTCCCACT...AGCCAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCTTGGACATGGCAATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420353.7
ENST00000456903.8
ENST00000548446.6
CDS-3UTR CAA 90 bp CTCCTGTCCAGACCAATGCATGGTTTTAGGGATACGACTAAAATGAAGACAAATGAGGCTGCAGCCCGGTaGCGCTCCAGAAAGCGCTGC +
Preference number: 5 (lower is better)
Translates to: LLSRPMHGFRDTTKMKTNEAAAR*RSRKRC
Trigger: GCAGCGCTTTCTGGAGCGCAACCGGGCTGCAGCCTC...ATTTGTCTTCATTTTAGTCGTATCCCTAAAACCATGCATTGGTCTGGACAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420353.7
CDS-3UTR CAA 90 bp AGTGACACCTTCCATGATGTTTGGTTCTGGTCCAGATGGATCTGGAAGACAAAGGGGCTGGAGAACCCGTaGGCTCTGAGCTTTCCTTGG +
Preference number: 5 (lower is better)
Translates to: SDTFHDVWFWSRWIWKTKGLENP*ALSFPW
Trigger: CCAAGGAAAGCTCAGAGCCAACGGGTTCTCCAGCCC...CTTTGTCTTCCAGATCCATCTGGACCAGAACCAAACATCATGGAAGGTGTCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CAA 90 bp GCTCTGGGACAACTGGAAGGGTTTCATACGGAAAGGCAATTAAAGCTGACCTATGGGCTGGAGAACCCGTaGGCTCTGAGCTTTCCTTGG +
Preference number: 5 (lower is better)
Translates to: ALGQLEGFHTERQLKLTYGLENP*ALSFPW
Trigger: CCAAGGAAAGCTCAGAGCCAACGGGTTCTCCAGCCC...ATAGGTCAGCTTTAATTGCCTTTCCGTATGAAACCCTTCCAGTTGTCCCAGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CAA 90 bp ATATTGCCATGTCCAAGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGGCTAAGATGACATCTCTCTaGGCTCTTGGGCGGGCGAGC +
Preference number: 5 (lower is better)
Translates to: ILPCPRQMGGDKMTSLLAKMTSL*ALGRAS
Trigger: GCTCGCCCGCCCAAGAGCCAAGAGAGATGTCATCTT...AGCCAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCTTGGACATGGCAATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420353.7
ENST00000456903.8
ENST00000548446.6
CDS-3UTR CAA 90 bp GGGGTAGAACAAAGGAACTCGAGAGTCCCCTACATGACAGCCTCCAGGAGGGCTAGGGTTTCTTTCTTTTaGGTGGCAGGTAGAGAGAAG +
Preference number: 5 (lower is better)
Translates to: GVEQRNSRVPYMTASRRARVSFF*VAGREK
Trigger: CTTCTCTCTACCTGCCACCAAAAAGAAAGAAACCCT...AGCCCTCCTGGAGGCTGTCATGTAGGGGACTCTCGAGTTCCTTTGTTCTACCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CAA 90 bp ATATTGCCATGTCCAAGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGGCTAGAACCTGGGGTCCTTaGCTGGGACCAGTTCTGCAC +
Preference number: 5 (lower is better)
Translates to: ILPCPRQMGGDKMTSLLARTWGP*LGPVLH
Trigger: GTGCAGAACTGGTCCCAGCAAAGGACCCCAGGTTCT...AGCCAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCTTGGACATGGCAATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CAA 90 bp AGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGGCTCTTGGGCGGGCGAGCTATTTCAGTGCCATTTaGTTACTGTGGTTCTGGCAG +
Preference number: 5 (lower is better)
Translates to: RQMGGDKMTSLLALGRASYFSAI*LLWFWQ
Trigger: CTGCCAGAACCACAGTAACAAAATGGCACTGAAATA...GCTCGCCCGCCCAAGAGCCAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS TCA 90 bp TCACCATGGTGCTGGCAGTACCCACCACCATTCCACAACCACCATTaGTTGAGGAGACTTGGTGAGTTAGGGTGGCTTTCAGTCTCATCT +
Preference number: 5 (lower is better)
Translates to: SPWCWQYPPPFHNHH*LRRLGELGWLSVSS
Trigger: AGATGAGACTGAAAGCCACCCTAACTCACCAAGTCTCCTCAATCAATGGTGGTTGTGGAATGGTGGTGGGTACTGCCAGCACCATGGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420353.7
ENST00000456903.8
ENST00000548446.6
CDS-3UTR CAA 90 bp CCACCCATATTGCCATGTCCAAGGCAGATGGGAGGGGATAAGATGACATCTCTCGAGCTAGCTAGTTCATaGAAGAGTCCCACCTCCTCA +
Preference number: 5 (lower is better)
Translates to: PPILPCPRQMGGDKMTSLELASS*KSPTSS
Trigger: TGAGGAGGTGGGACTCTTCAATGAACTAGCTAGCTC...GAGAGATGTCATCTTATCCCCTCCCATCTGCCTTGGACATGGCAATATGGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420353.7
ENST00000456903.8
ENST00000548446.6
CDS-3UTR CAA 90 bp GACACCCACCATACACTCAGCTCCTTTCTGAAAGTGTCCTCCCTTAGGCCTCTAGACAAGAGAGATGAATaGCTCCCTCTGCAACCCAAC +
Preference number: 5 (lower is better)
Translates to: DTHHTLSSFLKVSSLRPLDKRDE*LPLQPN
Trigger: GTTGGGTTGCAGAGGGAGCAATTCATCTCTCTTGTC...TAGAGGCCTAAGGGAGGACACTTTCAGAAAGGAGCTGAGTGTATGGTGGGTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CAA 90 bp CCCATATTGCCATGTCCAAGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGGAGCTAGCTAGTTCATaGAAGAGTCCCACCTCCTCA +
Preference number: 5 (lower is better)
Translates to: PILPCPRQMGGDKMTSLLELASS*KSPTSS
Trigger: TGAGGAGGTGGGACTCTTCAATGAACTAGCTAGCTC...CAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCTTGGACATGGCAATATGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420353.7
ENST00000456903.8
ENST00000548446.6
CDS-3UTR CAA 90 bp GCTCTGGGACAACTGGAAGGGTTTCATACGGAAAGGCAATTAAAGCTGACCTATGGCCACAAAATGAGGTaGCCAAGGCTTAGTGGGGTG +
Preference number: 5 (lower is better)
Translates to: ALGQLEGFHTERQLKLTYGHKMR*PRLSGV
Trigger: CACCCCACTAAGCCTTGGCAACCTCATTTTGTGGCC...ATAGGTCAGCTTTAATTGCCTTTCCGTATGAAACCCTTCCAGTTGTCCCAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CAA 90 bp AGTGACACCTTCCATGATGTTTGGTTCTGGTCCAGATGGATCTGGAAGACAAAGGGCCACAAAATGAGGTaGCCAAGGCTTAGTGGGGTG +
Preference number: 5 (lower is better)
Translates to: SDTFHDVWFWSRWIWKTKGHKMR*PRLSGV
Trigger: CACCCCACTAAGCCTTGGCAACCTCATTTTGTGGCC...CTTTGTCTTCCAGATCCATCTGGACCAGAACCAAACATCATGGAAGGTGTCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CAA 90 bp CCCATATTGCCATGTCCAAGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGCTGGAAGACAAAGATTaGGGGAGAGTGACCACATGG +
Preference number: 5 (lower is better)
Translates to: PILPCPRQMGGDKMTSLLLEDKD*GRVTTW
Trigger: CCATGTGGTCACTCTCCCCAAATCTTTGTCTTCCAG...CAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCTTGGACATGGCAATATGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CAA 90 bp GGGGTAGAACAAAGGAACTCGAGAGTCCCCTACATGACAGCCTCCAGGAGGGCTAAGTCAGTGAAACTATaGCTCATAGCCACTTCTTAC +
Preference number: 5 (lower is better)
Translates to: GVEQRNSRVPYMTASRRAKSVKL*LIATSY
Trigger: GTAAGAAGTGGCTATGAGCAATAGTTTCACTGACTT...AGCCCTCCTGGAGGCTGTCATGTAGGGGACTCTCGAGTTCCTTTGTTCTACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420353.7
CDS-3UTR CAA 90 bp CCCATATTGCCATGTCCAAGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGGAGACCCAGACCGAGTaGAGTTCCTTGATAAGATGG +
Preference number: 5 (lower is better)
Translates to: PILPCPRQMGGDKMTSLLETQTE*SSLIRW
Trigger: CCATCTTATCAAGGAACTCAACTCGGTCTGGGTCTC...CAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCTTGGACATGGCAATATGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420353.7
CDS-3UTR CAA 90 bp ATATTGCCATGTCCAAGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGGCTGAGCTAGCTAGTTCATaGAAGAGTCCCACCTCCTCA +
Preference number: 5 (lower is better)
Translates to: ILPCPRQMGGDKMTSLLAELASS*KSPTSS
Trigger: TGAGGAGGTGGGACTCTTCAATGAACTAGCTAGCTC...AGCCAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCTTGGACATGGCAATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420353.7
ENST00000456903.8
ENST00000548446.6
CDS-3UTR CAA 90 bp CTCTGCTTGTGTGCCTCTTGGAGGCTACTCAGATTTGCAACACACAATTCCCCCCATGATTACATGCGATaGTATCGGCATGCTCAGTTC +
Preference number: 5 (lower is better)
Translates to: LCLCASWRLLRFATHNSPHDYMR*YRHAQF
Trigger: GAACTGAGCATGCCGATACAATCGCATGTAATCATG...GGGGGAATTGTGTGTTGCAAATCTGAGTAGCCTCCAAGAGGCACACAAGCAGAG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000548446.6
CDS-3UTR CAA 90 bp GGGGTAGAACAAAGGAACTCGAGAGTCCCCTACATGACAGCCTCCAGGAGGGCTTTGATGGAACAAGCTTaGAAATACTTTGTTCCTGTC +
Preference number: 5 (lower is better)
Translates to: GVEQRNSRVPYMTASRRALMEQA*KYFVPV
Trigger: GACAGGAACAAAGTATTTCAAAGCTTGTTCCATCAA...AGCCCTCCTGGAGGCTGTCATGTAGGGGACTCTCGAGTTCCTTTGTTCTACCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CAA 90 bp ATATTGCCATGTCCAAGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGGCTGACAAGAGAGATGAATaGCTCCCTCTGCAACCCAAC +
Preference number: 5 (lower is better)
Translates to: ILPCPRQMGGDKMTSLLADKRDE*LPLQPN
Trigger: GTTGGGTTGCAGAGGGAGCAATTCATCTCTCTTGTC...AGCCAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCTTGGACATGGCAATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CAA 90 bp ATATTGCCATGTCCAAGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGGCTGAGAGAAGGACATTCTaGGCTTGCACAGATGGCAGA +
Preference number: 5 (lower is better)
Translates to: ILPCPRQMGGDKMTSLLAERRTF*ACTDGR
Trigger: TCTGCCATCTGTGCAAGCCAAGAATGTCCTTCTCTC...AGCCAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCTTGGACATGGCAATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CAA 90 bp CCCATATTGCCATGTCCAAGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGTTGGCCTCTCTAGTATaGTGGGAGGCTTTCTTAGAC +
Preference number: 5 (lower is better)
Translates to: PILPCPRQMGGDKMTSLLLASLV*WEAFLD
Trigger: GTCTAAGAAAGCCTCCCACAATACTAGAGAGGCCAA...CAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCTTGGACATGGCAATATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CAA 90 bp CCACCCATATTGCCATGTCCAAGGCAGATGGGAGGGGATAAGATGACATCTCTCCTAAGGAAGTCAGATTaGAGATGCATAACCAGCAGC +
Preference number: 5 (lower is better)
Translates to: PPILPCPRQMGGDKMTSLLRKSD*RCITSS
Trigger: GCTGCTGGTTATGCATCTCAAATCTGACTTCCTTAG...GAGAGATGTCATCTTATCCCCTCCCATCTGCCTTGGACATGGCAATATGGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CAA 90 bp GCTCTGGGACAACTGGAAGGGTTTCATACGGAAAGGCAATTAAAGCTGACCTATGTACATAGGGCACGGTaGGGGTTAAGCACTCCATCT +
Preference number: 5 (lower is better)
Translates to: ALGQLEGFHTERQLKLTYVHRAR*GLSTPS
Trigger: AGATGGAGTGCTTAACCCCAACCGTGCCCTATGTAC...ATAGGTCAGCTTTAATTGCCTTTCCGTATGAAACCCTTCCAGTTGTCCCAGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS TCA 90 bp GTACCCACCACCATTCCACAACCACCATTGATTGAGGAGACTTGGTaGGTTAGGGTGGCTTTCAGTCTCATCTTGGCTTCTGATGGTATA +
Preference number: 5 (lower is better)
Translates to: VPTTIPQPPLIEETW*VRVAFSLILASDGI
Trigger: TATACCATCAGAAGCCAAGATGAGACTGAAAGCCACCCTAACTCACCAAGTCTCCTCAATCAATGGTGGTTGTGGAATGGTGGTGGGTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420353.7
ENST00000456903.8
ENST00000548446.6
CDS-3UTR CAA 90 bp CTCTGCTTGTGTGCCTCTTGGAGGCTACTCAGATTTGCAACACACAATTCCCCCACTGGCTCTTCTTCTTaGATTTTGATGTCTGGTGTG +
Preference number: 5 (lower is better)
Translates to: LCLCASWRLLRFATHNSPTGSSS*ILMSGV
Trigger: CACACCAGACATCAAAATCAAAGAAGAAGAGCCAGT...GGGGGAATTGTGTGTTGCAAATCTGAGTAGCCTCCAAGAGGCACACAAGCAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548446.6
CDS-3UTR CAA 90 bp ATATTGCCATGTCCAAGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGGCTGCTTTCAGTCTCATCTaGGCTTCTGATGGTATAGGG +
Preference number: 5 (lower is better)
Translates to: ILPCPRQMGGDKMTSLLAAFSLI*ASDGIG
Trigger: CCCTATACCATCAGAAGCCAAGATGAGACTGAAAGC...AGCCAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCTTGGACATGGCAATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420353.7
ENST00000456903.8
ENST00000548446.6
CDS-3UTR CAA 90 bp TTTGTTGGCCTCTCTAGTATTGTGGGAGGCTTTCTTAGACTTTTCAACTCTAAGCGAACACTGAGGCCATaGCTAGGGGCTGTTGCTGAG +
Preference number: 5 (lower is better)
Translates to: FVGLSSIVGGFLRLFNSKRTLRP*LGAVAE
Trigger: CTCAGCAACAGCCCCTAGCAATGGCCTCAGTGTTCG...CTTAGAGTTGAAAAGTCTAAGAAAGCCTCCCACAATACTAGAGAGGCCAACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CAA 90 bp AGTGACACCTTCCATGATGTTTGGTTCTGGTCCAGATGGATCTGGAAGACAAAGGAGAGAAGGACATTCTaGGCTTGCACAGATGGCAGA +
Preference number: 5 (lower is better)
Translates to: SDTFHDVWFWSRWIWKTKERRTF*ACTDGR
Trigger: TCTGCCATCTGTGCAAGCCAAGAATGTCCTTCTCTC...CTTTGTCTTCCAGATCCATCTGGACCAGAACCAAACATCATGGAAGGTGTCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CAA 90 bp ATATTGCCATGTCCAAGGCAGATGGGAGGGGATAAGATGACATCTCTCTTGGCTTTGGCCTCTCTAGTATaGTGGGAGGCTTTCTTAGAC +
Preference number: 5 (lower is better)
Translates to: ILPCPRQMGGDKMTSLLALASLV*WEAFLD
Trigger: GTCTAAGAAAGCCTCCCACAATACTAGAGAGGCCAA...AGCCAAGAGAGATGTCATCTTATCCCCTCCCATCTGCCTTGGACATGGCAATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CAA 90 bp CCACCCATATTGCCATGTCCAAGGCAGATGGGAGGGGATAAGATGACATCTCTCTCATCTGCAGCTTTCTaGAATTCATGTTCAAAGGAG +
Preference number: 5 (lower is better)
Translates to: PPILPCPRQMGGDKMTSLSSAAF*NSCSKE
Trigger: CTCCTTTGAACATGAATTCAAGAAAGCTGCAGATGA...GAGAGATGTCATCTTATCCCCTCCCATCTGCCTTGGACATGGCAATATGGGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420353.7
ENST00000456903.8
ENST00000548446.6
CDS-3UTR CAA 90 bp GCTCTGGGACAACTGGAAGGGTTTCATACGGAAAGGCAATTAAAGCTGACCTATGCTTTCAGTCTCATCTaGGCTTCTGATGGTATAGGG +
Preference number: 5 (lower is better)
Translates to: ALGQLEGFHTERQLKLTYAFSLI*ASDGIG
Trigger: CCCTATACCATCAGAAGCCAAGATGAGACTGAAAGC...ATAGGTCAGCTTTAATTGCCTTTCCGTATGAAACCCTTCCAGTTGTCCCAGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CAA 90 bp GCTCTGGGACAACTGGAAGGGTTTCATACGGAAAGGCAATTAAAGCTGACCTATAACCCACTCAGCATCTaGGCTATGACGCTTCAAGAT +
Preference number: 5 (lower is better)
Translates to: ALGQLEGFHTERQLKLTYNPLSI*AMTLQD
Trigger: ATCTTGAAGCGTCATAGCCAAGATGCTGAGTGGGTT...ATAGGTCAGCTTTAATTGCCTTTCCGTATGAAACCCTTCCAGTTGTCCCAGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CAA 90 bp AGTGACACCTTCCATGATGTTTGGTTCTGGTCCAGATGGATCTGGAAGACAAAGCATGATTACATGCGATaGTATCGGCATGCTCAGTTC +
Preference number: 5 (lower is better)
Translates to: SDTFHDVWFWSRWIWKTKHDYMR*YRHAQF
Trigger: GAACTGAGCATGCCGATACAATCGCATGTAATCATG...CTTTGTCTTCCAGATCCATCTGGACCAGAACCAAACATCATGGAAGGTGTCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CAA 90 bp AGTGTAGCTGAGAAGTCTGATCAGCTCAGAAAAGAGTGGAATTTGGCAACAAATGAGCTAGCTAGTTCATaGAAGAGTCCCACCTCCTCA +
Preference number: 5 (lower is better)
Translates to: SVAEKSDQLRKEWNLATNELASS*KSPTSS
Trigger: TGAGGAGGTGGGACTCTTCAATGAACTAGCTAGCTC...ATTTGTTGCCAAATTCCACTCTTTTCTGAGCTGATCAGACTTCTCAGCTACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548118.6
ENST00000591397.1
CDS-3UTR CAA 90 bp AGCAATAACAAGGTAAGTGAAGTTACCTTTGACTATCAGAGAAGTTTCAGGGCACTGGAAGACAAAGATTaGGGGAGAGTGACCACATGG +
Preference number: 5 (lower is better)
Translates to: SNNKVSEVTFDYQRSFRALEDKD*GRVTTW
Trigger: CCATGTGGTCACTCTCCCCAAATCTTTGTCTTCCAG...TGCCCTGAAACTTCTCTGATAGTCAAAGGTAACTTCACTTACCTTGTTATTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CAA 90 bp GCTCTGGGACAACTGGAAGGGTTTCATACGGAAAGGCAATTAAAGCTGACCTATAGGCAAAAGATGTATTaGAAATATCCTCCACACCTG +
Preference number: 5 (lower is better)
Translates to: ALGQLEGFHTERQLKLTYRQKMY*KYPPHL
Trigger: CAGGTGTGGAGGATATTTCAAATACATCTTTTGCCT...ATAGGTCAGCTTTAATTGCCTTTCCGTATGAAACCCTTCCAGTTGTCCCAGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420353.7
CDS-3UTR CAA 90 bp ACAAGAGGACTAATTTTCGGTGACGACAGACTTGTGCTGATCCATCATCTGGAAAATACCACCAGTTTTTaGGCAACAGTCCTGCTTCTT +
Preference number: 5 (lower is better)
Translates to: TRGLIFGDDRLVLIHHLENTTSF*ATVLLL
Trigger: AAGAAGCAGGACTGTTGCCAAAAAACTGGTGGTATT...TTCCAGATGATGGATCAGCACAAGTCTGTCGTCACCGAAAATTAGTCCTCTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000548118.6
ENST00000591397.1
CDS-3UTR CAA 90 bp ACAAGAGGACTAATTTTCGGTGACGACAGACTTGTGCTGATCCATCATCTGGAATCATCTGCAGCTTTCTaGAATTCATGTTCAAAGGAG +
Preference number: 5 (lower is better)
Translates to: TRGLIFGDDRLVLIHHLESSAAF*NSCSKE
Trigger: CTCCTTTGAACATGAATTCAAGAAAGCTGCAGATGA...TTCCAGATGATGGATCAGCACAAGTCTGTCGTCACCGAAAATTAGTCCTCTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548118.6
ENST00000591397.1
CDS-3UTR CAA 90 bp AGCAATAACAAGGTAAGTGAAGTTACCTTTGACTATCAGAGAAGTTTCAGGGCAAACTGGGCCACCTCATaGCGTAGTAATGTGACTTCA +
Preference number: 5 (lower is better)
Translates to: SNNKVSEVTFDYQRSFRANWATS*RSNVTS
Trigger: TGAAGTCACATTACTACGCAATGAGGTGGCCCAGTT...TGCCCTGAAACTTCTCTGATAGTCAAAGGTAACTTCACTTACCTTGTTATTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CAA 90 bp CTCCTGTCCAGACCAATGCATGGTTTTAGGGATACGACTAAAATGAAGACAAATACTGGCTCTTCTTCTTaGATTTTGATGTCTGGTGTG +
Preference number: 5 (lower is better)
Translates to: LLSRPMHGFRDTTKMKTNTGSSS*ILMSGV
Trigger: CACACCAGACATCAAAATCAAAGAAGAAGAGCCAGT...ATTTGTCTTCATTTTAGTCGTATCCCTAAAACCATGCATTGGTCTGGACAGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000420353.7
CDS-3UTR CAA 90 bp AGCAATAACAAGGTAAGTGAAGTTACCTTTGACTATCAGAGAAGTTTCAGGGCACTAAGGAAGTCAGATTaGAGATGCATAACCAGCAGC +
Preference number: 5 (lower is better)
Translates to: SNNKVSEVTFDYQRSFRALRKSD*RCITSS
Trigger: GCTGCTGGTTATGCATCTCAAATCTGACTTCCTTAG...TGCCCTGAAACTTCTCTGATAGTCAAAGGTAACTTCACTTACCTTGTTATTGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CAA 90 bp AGTGTAGCTGAGAAGTCTGATCAGCTCAGAAAAGAGTGGAATTTGGCAACAAATTCATCTGCAGCTTTCTaGAATTCATGTTCAAAGGAG +
Preference number: 5 (lower is better)
Translates to: SVAEKSDQLRKEWNLATNSSAAF*NSCSKE
Trigger: CTCCTTTGAACATGAATTCAAGAAAGCTGCAGATGA...ATTTGTTGCCAAATTCCACTCTTTTCTGAGCTGATCAGACTTCTCAGCTACACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548118.6
ENST00000591397.1
CDS-3UTR CAA 90 bp AGCAATAACAAGGTAAGTGAAGTTACCTTTGACTATCAGAGAAGTTTCAGGGCAACTGGCTCTTCTTCTTaGATTTTGATGTCTGGTGTG +
Preference number: 5 (lower is better)
Translates to: SNNKVSEVTFDYQRSFRATGSSS*ILMSGV
Trigger: CACACCAGACATCAAAATCAAAGAAGAAGAGCCAGT...TGCCCTGAAACTTCTCTGATAGTCAAAGGTAACTTCACTTACCTTGTTATTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS-3UTR CAA 90 bp AGCAATAACAAGGTAAGTGAAGTTACCTTTGACTATCAGAGAAGTTTCAGGGCATCATCTGCAGCTTTCTaGAATTCATGTTCAAAGGAG +
Preference number: 5 (lower is better)
Translates to: SNNKVSEVTFDYQRSFRASSAAF*NSCSKE
Trigger: CTCCTTTGAACATGAATTCAAGAAAGCTGCAGATGA...TGCCCTGAAACTTCTCTGATAGTCAAAGGTAACTTCACTTACCTTGTTATTGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420353.7
ENST00000456903.8
CDS GCA 72 bp TTCGCTTTTGGCGGCAGCGGGAGGCTGCAGCCCGGTTaGGCTCCAGAAAGCGCTGCCGTCGCTCATCTGGAT +
Preference number: 6 (lower is better)
Translates to: FAFGGSGRLQPG*APESAAVAHLD
Trigger: ATCCAGATGAGCGACGGCAGCGCTTTCTGGAGCGCAACCGGGCTGCAGCCTCCCGCTGCCGCCAAAAGCGAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000420353.7
ENST00000456903.8
ENST00000546661.1
ENST00000548446.6
CDS GCA 72 bp CGGGAGGCTGCAGCCCGGTTGCGCTCCAGAAAGCGCTaGCGTCGCTCATCTGGATCTTCATCTACTGTGCGC +
Preference number: 6 (lower is better)
Translates to: REAAARLRSRKR*RRSSGSSSTVR
Trigger: GCGCACAGTAGATGAAGATCCAGATGAGCGACGGCAGCGCTTTCTGGAGCGCAACCGGGCTGCAGCCTCCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000420353.7
ENST00000456903.8
ENST00000546661.1
ENST00000548446.6
CDS GCA 72 bp GAATCTGGCTCTGCTCTGGGCGGGCTGTCACCATGGTaGTGGCAGTACCCACCACCATTCCACAACCACCAT +
Preference number: 6 (lower is better)
Translates to: ESGSALGGLSPW*WQYPPPFHNHH
Trigger: ATGGTGGTTGTGGAATGGTGGTGGGTACTGCCAGCACCATGGTGACAGCCCGCCCAGAGCAGAGCCAGATTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420353.7
ENST00000456903.8
ENST00000548446.6
CDS GCA 72 bp CATCTGAGTGAGGACCGAGGTGGCCACAGCTTCAGCTaGAGAGCGAACACTGAGGCCATTGCTAGGGGCTGT +
Preference number: 6 (lower is better)
Translates to: HLSEDRGGHSFS*RANTEAIARGC
Trigger: ACAGCCCCTAGCAATGGCCTCAGTGTTCGCTCTGCAGCTGAAGCTGTGGCCACCTCGGTCCTCACTCAGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000420353.7
ENST00000456903.8
ENST00000546661.1
ENST00000548446.6
ENST00000551087.1
CDS CAA 72 bp ATTTCATATAGCAGAGAGGAGCGGCTGGTAGCTCCGTaGCCTCCCGCCTGCCCGCGCTCGGTCCTACAATCT +
Preference number: 6 (lower is better)
Translates to: ISYSREERLVAP*PPACPRSVLQS
Trigger: AGATTGTAGGACCGAGCGCGGGCAGGCGGGAGGCAACGGAGCTACCAGCCGCTCCTCTCTGCTATATGAAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420353.7
ENST00000548446.6
ENST00000588232.5
ENST00000589726.1
ENST00000591397.1
CDS TCA 72 bp AGAGCGAACACTGAGGCCATTGCTAGGGGCTGTTGCTaGGCTGTGCTGAATCACAGGGGCTGGAGAACCCGT +
Preference number: 6 (lower is better)
Translates to: RANTEAIARGCC*AVLNHRGWRTR
Trigger: ACGGGTTCTCCAGCCCCTGTGATTCAGCACAGCTCAGCAACAGCCCCTAGCAATGGCCTCAGTGTTCGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000420353.7
ENST00000456903.8
ENST00000546661.1
ENST00000548446.6
ENST00000551087.1
CDS CCA 72 bp AGGTCTGGCCAGCGATATAACAGACGGCATCTGTACTaGAGGCCCTGGCAACACAGGCATGGTCTGTCCATT +
Preference number: 6 (lower is better)
Translates to: RSGQRYNRRHLY*RPWQHRHGLSI
Trigger: AATGGACAGACCATGCCTGTGTTGCCAGGGCCTCCAGTACAGATGCCGTCTGTTATATCGCTGGCCAGACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420353.7
ENST00000456903.8
ENST00000548446.6
CDS CCA 72 bp GCCAGAGGGAGAAATGGAGCCACTACTGTTAACTGGTaGGCCAGGGATACCAGGAATGTTGGGCACCATGGA +
Preference number: 6 (lower is better)
Translates to: ARGRNGATTVNW*ARDTRNVGHHG
Trigger: TCCATGGTGCCCAACATTCCTGGTATCCCTGGCCCACCAGTTAACAGTAGTGGCTCCATTTCTCCCTCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420353.7
ENST00000456903.8
ENST00000548446.6
CDS CCA 72 bp GTGGCCAGAGGGAGAAATGGAGCCACTACTGTTAACTaGTGGGCCAGGGATACCAGGAATGTTGGGCACCAT +
Preference number: 6 (lower is better)
Translates to: VARGRNGATTVN*WARDTRNVGHH
Trigger: ATGGTGCCCAACATTCCTGGTATCCCTGGCCCACCAGTTAACAGTAGTGGCTCCATTTCTCCCTCTGGCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420353.7
ENST00000456903.8
ENST00000548446.6
CDS CCA 72 bp CCTCTCCACCAGAGGAGGCATCATCTGCCCGCAGACTaGGACTGTGGGGTCATGATTACATGCGATTGTATC +
Preference number: 6 (lower is better)
Translates to: PLHQRRHHLPAD*DCGVMITCDCI
Trigger: GATACAATCGCATGTAATCATGACCCCACAGTCCCAGTCTGCGGGCAGATGATGCCTCCTCTGGTGGAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000420353.7
ENST00000456903.8
ENST00000546661.1
ENST00000548446.6
ENST00000551087.1
CDS TCA 72 bp GGCATCATCTGCCCGCAGACTGGGACTGTGGGGTCATaGTTACATGCGATTGTATCGGCATGCTCAGTTCTG +
Preference number: 6 (lower is better)
Translates to: GIICPQTGTVGS*LHAIVSACSVL
Trigger: CAGAACTGAGCATGCCGATACAATCGCATGTAATCATGACCCCACAGTCCCAGTCTGCGGGCAGATGATGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000420353.7
ENST00000456903.8
ENST00000546661.1
ENST00000548446.6
ENST00000551087.1
CDS GCA 72 bp CTGCCCGCAGACTGGGACTGTGGGGTCATGATTACATaGGATTGTATCGGCATGCTCAGTTCTGTCCTTTGG +
Preference number: 6 (lower is better)
Translates to: LPADWDCGVMIT*DCIGMLSSVLW
Trigger: CCAAAGGACAGAACTGAGCATGCCGATACAATCGCATGTAATCATGACCCCACAGTCCCAGTCTGCGGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000420353.7
ENST00000456903.8
ENST00000546661.1
ENST00000548446.6
ENST00000551087.1
CDS CAA 72 bp CTGAGCTGTGCTGAATCACAGGGGCTGGAGAACCCGTaGGCTCTGAGCTTTCCTTGGGGCTTTCTAAATAGC +
Preference number: 6 (lower is better)
Translates to: LSCAESQGLENP*ALSFPWGFLNS
Trigger: GCTATTTAGAAAGCCCCAAGGAAAGCTCAGAGCCAACGGGTTCTCCAGCCCCTGTGATTCAGCACAGCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000420353.7
ENST00000456903.8
ENST00000546661.1
ENST00000548446.6
CDS CAA 72 bp CGCAGACTGGGACTGTGGGGTCATGATTACATGCGATaGTATCGGCATGCTCAGTTCTGTCCTTTGGCTGGC +
Preference number: 6 (lower is better)
Translates to: RRLGLWGHDYMR*YRHAQFCPLAG
Trigger: GCCAGCCAAAGGACAGAACTGAGCATGCCGATACAATCGCATGTAATCATGACCCCACAGTCCCAGTCTGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000420353.7
ENST00000456903.8
ENST00000546661.1
ENST00000548446.6
ENST00000551087.1
CDS CAA 90 bp TCATCTGCCCGCAGACTGGGACTGTGGGGTCATGATTACATGCGATaGTATCGGCATGCTCAGTTCTGTCCTTTGGCTGGCCATCTGAGT +
Preference number: 6 (lower is better)
Translates to: SSARRLGLWGHDYMR*YRHAQFCPLAGHLS
Trigger: ACTCAGATGGCCAGCCAAAGGACAGAACTGAGCATGCCGATACAATCGCATGTAATCATGACCCCACAGTCCCAGTCTGCGGGCAGATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000420353.7
ENST00000456903.8
ENST00000546661.1
ENST00000548446.6
ENST00000551087.1
CDS CAA 72 bp TGGAGTAGGCGTTTGATCTGTCCACAGCCCGGGGCATaGCACACAAACGGTCTGTCGTCTCCCATATTTCAT +
Preference number: 6 (lower is better)
Translates to: WSRRLICPQPGA*HTNGLSSPIFH
Trigger: ATGAAATATGGGAGACGACAGACCGTTTGTGTGCAATGCCCCGGGCTGTGGACAGATCAAACGCCTACTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000551480.2
ENST00000588232.5
CDS CAA 90 bp TCAGGTGGGGATGAGTCTACCTCCACTGGCTCTTCTTCTTTGATTTaGATGTCTGGTGTGGAAGGCAGAGACATGTCAAGGGGCCCAGCA +
Preference number: 6 (lower is better)
Translates to: SGGDESTSTGSSSLI*MSGVEGRDMSRGPA
Trigger: TGCTGGGCCCCTTGACATGTCTCTGCCTTCCACACCAGACATCAAAATCAAAGAAGAAGAGCCAGTGGAGGTAGACTCATCCCCACCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000420353.7
ENST00000456903.8
ENST00000548446.6
ENST00000551480.2
ENST00000588078.5
ENST00000588232.5
CDS TCA 72 bp TGCTGGCAGTACCCACCACCATTCCACAACCACCATTaGTTGAGGAGACTTGGTGAGTTAGGGTGGCTTTCA +
Preference number: 6 (lower is better)
Translates to: CWQYPPPFHNHH*LRRLGELGWLS
Trigger: TGAAAGCCACCCTAACTCACCAAGTCTCCTCAATCAATGGTGGTTGTGGAATGGTGGTGGGTACTGCCAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420353.7
ENST00000456903.8
ENST00000548446.6
CDS CAA 72 bp TCCTCGTTTGTAAATCTCTGTCCACAGCCCGGGGCATaGCACACAAACGGTCTGTCGTCTCCCATATTTCAT +
Preference number: 6 (lower is better)
Translates to: SSFVNLCPQPGA*HTNGLSSPIFH
Trigger: ATGAAATATGGGAGACGACAGACCGTTTGTGTGCAATGCCCCGGGCTGTGGACAGAGATTTACAAACGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000420353.7
ENST00000456903.8
ENST00000548118.6
ENST00000548446.6
ENST00000588078.5
ENST00000591397.1
CDS CAA 72 bp GGTGGGGATGAGTCTACCTCCACTGGCTCTTCTTCTTaGATTTTGATGTCTGGTGTGGAAGGCAGAGACATG +
Preference number: 6 (lower is better)
Translates to: GGDESTSTGSSS*ILMSGVEGRDM
Trigger: CATGTCTCTGCCTTCCACACCAGACATCAAAATCAAAGAAGAAGAGCCAGTGGAGGTAGACTCATCCCCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000420353.7
ENST00000456903.8
ENST00000548446.6
ENST00000551480.2
ENST00000588078.5
ENST00000588232.5
CDS CCA 72 bp GCTTTCAGTCTCATCTTGGCTTCTGATGGTATAGGGTaGCCAGAGGGAGAAATGGAGCCACTACTGTTAACT +
Preference number: 6 (lower is better)
Translates to: AFSLILASDGIG*PEGEMEPLLLT
Trigger: AGTTAACAGTAGTGGCTCCATTTCTCCCTCTGGCCACCCTATACCATCAGAAGCCAAGATGAGACTGAAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420353.7
ENST00000456903.8
ENST00000548446.6
CDS CAA 72 bp GTATATTGTAAACGTACCTGTCCACAGCCCGGGGCATaGCACACAAACGGTCTGTCGTCTCCCATATTTCAT +
Preference number: 6 (lower is better)
Translates to: VYCKRTCPQPGA*HTNGLSSPIFH
Trigger: ATGAAATATGGGAGACGACAGACCGTTTGTGTGCAATGCCCCGGGCTGTGGACAGGTACGTTTACAATATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589726.1
CDS CAA 90 bp AGGGGCCCAGCAGCAGCCTTTTTCTCATCCTCATCTGCAGCTTTCTaGAATTCATGTTCAAAGGAGCTAGCTAGTTCATTGAAGAGTCCC +
Preference number: 6 (lower is better)
Translates to: RGPAAAFFSSSSAAF*NSCSKELASSLKSP
Trigger: GGGACTCTTCAATGAACTAGCTAGCTCCTTTGAACATGAATTCAAGAAAGCTGCAGATGAGGATGAGAAAAAGGCTGCTGCTGGGCCCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000420353.7
ENST00000456903.8
ENST00000551480.2
ENST00000588232.5
CDS TCA 72 bp ACCATTCCACAACCACCATTGATTGAGGAGACTTGGTaGGTTAGGGTGGCTTTCAGTCTCATCTTGGCTTCT +
Preference number: 6 (lower is better)
Translates to: TIPQPPLIEETW*VRVAFSLILAS
Trigger: AGAAGCCAAGATGAGACTGAAAGCCACCCTAACTCACCAAGTCTCCTCAATCAATGGTGGTTGTGGAATGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420353.7
ENST00000456903.8
ENST00000548446.6
CDS GCA 72 bp TATATTGTAAACGTACCTGTCCACAGCCCGGGGCATTaGACACAAACGGTCTGTCGTCTCCCATATTTCATA +
Preference number: 6 (lower is better)
Translates to: YIVNVPVHSPGH*TQTVCRLPYFI
Trigger: TATGAAATATGGGAGACGACAGACCGTTTGTGTGCAATGCCCCGGGCTGTGGACAGGTACGTTTACAATATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589726.1
CDS CAA 72 bp GATGAGTCTACCTCCACTGGCTCTTCTTCTTTGATTTaGATGTCTGGTGTGGAAGGCAGAGACATGTCAAGG +
Preference number: 6 (lower is better)
Translates to: DESTSTGSSSLI*MSGVEGRDMSR
Trigger: CCTTGACATGTCTCTGCCTTCCACACCAGACATCAAAATCAAAGAAGAAGAGCCAGTGGAGGTAGACTCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000420353.7
ENST00000456903.8
ENST00000548446.6
ENST00000551480.2
ENST00000588078.5
ENST00000588232.5
CDS CAA 90 bp CACAATAAAGTATATTGTAAACGTACCTGTCCACAGCCCGGGGCATaGCACACAAACGGTCTGTCGTCTCCCATATTTCATATAGCAGAG +
Preference number: 6 (lower is better)
Translates to: HNKVYCKRTCPQPGA*HTNGLSSPIFHIAE
Trigger: CTCTGCTATATGAAATATGGGAGACGACAGACCGTTTGTGTGCAATGCCCCGGGCTGTGGACAGGTACGTTTACAATATACTTTATTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589726.1
CDS GCA 72 bp ATGGAAGACAGCAAGGCAGATTTCATTACGGTAGAGTaGCTACACTTCCTCATAACTTGGATTTACACACTG +
Preference number: 6 (lower is better)
Translates to: MEDSKADFITVE*LHFLITWIYTL
Trigger: CAGTGTGTAAATCCAAGTTATGAGGAAGTGTAGGCACTCTACCGTAATGAAATCTGCCTTGCTGTCTTCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589726.1
CDS CAA 72 bp GCAGCAGCCTTTTTCTCATCCTCATCTGCAGCTTTCTaGAATTCATGTTCAAAGGAGCTAGCTAGTTCATTG +
Preference number: 6 (lower is better)
Translates to: AAAFFSSSSAAF*NSCSKELASSL
Trigger: CAATGAACTAGCTAGCTCCTTTGAACATGAATTCAAGAAAGCTGCAGATGAGGATGAGAAAAAGGCTGCTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000420353.7
ENST00000456903.8
ENST00000551480.2
ENST00000588232.5