RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ATF4 (Homo sapiens)

Ensembl gene IDs: ENSG00000128272

Ensembl transcript IDs: ENST00000337304.2, ENST00000404241.6, ENST00000680748.1

Found 19 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS CCA 90 bp CCGCCCTTGACTCACGCCCGCGCCGCCGCCCTGCCGCCGCCATCTTaGTTCCTGCCACGTTTCGTGGGGCAACAGCCAAGACCCCTGGGA +
Preference number: 5 (lower is better)
Translates to: PPLTHARAAALPPPS*FLPRFVGQQPRPLG
Trigger: TCCCAGGGGTCTTGGCTGTTGCCCCACGAAACGTGGCAGGAACCAAGATGGCGGCGGCAGGGCGGCGGCGCGGGCGTGAGTCAAGGGCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337304.2
CDS TCA 90 bp TCTATGATCAGAGTCCGTTCTTTCCTTCGCCGCCGGAGCGCGGAGTaGTCTCCCAGACACGCCTCGCTTCCGGTGTCAGCGCAGTGGGCG +
Preference number: 5 (lower is better)
Translates to: SMIRVRSFLRRRSAE*SPRHASLPVSAQWA
Trigger: CGCCCACTGCGCTGACACCGGAAGCGAGGCGTGTCTGGGAGATCACTCCGCGCTCCGGCGGCGAAGGAAAGAACGGACTCTGATCATAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404241.6
CDS TCA 90 bp TGGCCTCACGAAAGGAGAGAGGTGTACTACTTTACTAGGCTTCTATaGTCAGAGTCCGTTCTTTCCTTCGCCGCCGGAGCGCGGAGTGAT +
Preference number: 5 (lower is better)
Translates to: WPHERREVYYFTRLL*SESVLSFAAGARSD
Trigger: ATCACTCCGCGCTCCGGCGGCGAAGGAAAGAACGGACTCTGATCATAGAAGCCTAGTAAAGTAGTACACCTCTCTCCTTTCGTGAGGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404241.6
CDS CCA 90 bp TTATGCCCAGGGCGTAGCTGTGACGAGAAAAGGAGTTTGTTCTTATaGCCTCACGAAAGGAGAGAGGTGTACTACTTTACTAGGCTTCTA +
Preference number: 5 (lower is better)
Translates to: LCPGRSCDEKRSLFL*PHERREVYYFTRLL
Trigger: TAGAAGCCTAGTAAAGTAGTACACCTCTCTCCTTTCGTGAGGCCATAAGAACAAACTCCTTTTCTCGTCACAGCTACGCCCTGGGCATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404241.6
CDS CAA 90 bp CCCGCCCTTGACTCACGCCCGCGCCGCCGCCCTGCCGCCGCCATCTaGGTTCCTGCCACGTTTCGTGGGGCAACAGCCAAGACCCCTGGG +
Preference number: 6 (lower is better)
Translates to: PALDSRPRRRPAAAI*VPATFRGATAKTPG
Trigger: CCCAGGGGTCTTGGCTGTTGCCCCACGAAACGTGGCAGGAACCAAGATGGCGGCGGCAGGGCGGCGGCGCGGGCGTGAGTCAAGGGCGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337304.2
CDS TCA 72 bp TTCATAGCCGACACGGCGCTGCTGCCCCCGGGAGGTTaGAGGGGCCTCGAGAGGGCGCGCCGGGCCTGTCCA +
Preference number: 6 (lower is better)
Translates to: FIADTALLPPGG*RGLERARRACP
Trigger: TGGACAGGCCCGGCGCGCCCTCTCGAGGCCCCTTCAACCTCCCGGGGGCAGCAGCGCCGTGTCGGCTATGAA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000404241.6
CDS CAA 72 bp GACTCACGCCCGCGCCGCCGCCCTGCCGCCGCCATCTaGGTTCCTGCCACGTTTCGTGGGGCAACAGCCAAG +
Preference number: 6 (lower is better)
Translates to: DSRPRRRPAAAI*VPATFRGATAK
Trigger: CTTGGCTGTTGCCCCACGAAACGTGGCAGGAACCAAGATGGCGGCGGCAGGGCGGCGGCGCGGGCGTGAGTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337304.2
CDS CCA 72 bp ACTCACGCCCGCGCCGCCGCCCTGCCGCCGCCATCTTaGTTCCTGCCACGTTTCGTGGGGCAACAGCCAAGA +
Preference number: 6 (lower is better)
Translates to: THARAAALPPPS*FLPRFVGQQPR
Trigger: TCTTGGCTGTTGCCCCACGAAACGTGGCAGGAACCAAGATGGCGGCGGCAGGGCGGCGGCGCGGGCGTGAGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337304.2
CDS CCA 72 bp CCCTGCCGCCGCCATCTTGGTTCCTGCCACGTTTCGTaGGGCAACAGCCAAGACCCCTGGGACCCTTGCGGG +
Preference number: 6 (lower is better)
Translates to: PCRRHLGSCHVS*GNSQDPWDPCG
Trigger: CCCGCAAGGGTCCCAGGGGTCTTGGCTGTTGCCCCACGAAACGTGGCAGGAACCAAGATGGCGGCGGCAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337304.2
CDS TCA 72 bp AGAGTCCGTTCTTTCCTTCGCCGCCGGAGCGCGGAGTaGTCTCCCAGACACGCCTCGCTTCCGGTGTCAGCG +
Preference number: 6 (lower is better)
Translates to: RVRSFLRRRSAE*SPRHASLPVSA
Trigger: CGCTGACACCGGAAGCGAGGCGTGTCTGGGAGATCACTCCGCGCTCCGGCGGCGAAGGAAAGAACGGACTCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404241.6
CDS CCA 72 bp TCTCCCAGACACGCCTCGCTTCCGGTGTCAGCGCAGTaGGCGGGGAAAGGTCGTTTTCCGGCGAAGAGTTTT +
Preference number: 6 (lower is better)
Translates to: SPRHASLPVSAQ*AGKGRFPAKSF
Trigger: AAAACTCTTCGCCGGAAAACGACCTTTCCCCGCCCACTGCGCTGACACCGGAAGCGAGGCGTGTCTGGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404241.6
CDS CCA 72 bp AGGAGGCCCCTAACCCTAGATCCCACCAGGACGATGTaGTGGTGGCCCACTCACCCTTGCTGTTGTTGGAGG +
Preference number: 6 (lower is better)
Translates to: RRPLTLDPTRTM*WWPTHPCCCWR
Trigger: CCTCCAACAACAGCAAGGGTGAGTGGGCCACCACCACATCGTCCTGGTGGGATCTAGGGTTAGGGGCCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680748.1
CDS GCA 72 bp TCGGGAACAGGGCAGTTGTATTTGCCCCTCCCTGCTTaGAACTCAGGTTCCACAAAATGGACGCTCACGGAG +
Preference number: 6 (lower is better)
Translates to: SGTGQLYLPLPA*NSGSTKWTLTE
Trigger: CTCCGTGAGCGTCCATTTTGTGGAACCTGAGTTGCAAGCAGGGAGGGGCAAATACAACTGCCCTGTTCCCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337304.2
CDS CAA 72 bp ATCGGGAACAGGGCAGTTGTATTTGCCCCTCCCTGCTaGCAACTCAGGTTCCACAAAATGGACGCTCACGGA +
Preference number: 6 (lower is better)
Translates to: IGNRAVVFAPPC*QLRFHKMDAHG
Trigger: TCCGTGAGCGTCCATTTTGTGGAACCTGAGTTGCAAGCAGGGAGGGGCAAATACAACTGCCCTGTTCCCGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337304.2
CDS CAA 72 bp CGGCCATCTAGAGAATCGGGAACAGGGCAGTTGTATTaGCCCCTCCCTGCTTGCAACTCAGGTTCCACAAAA +
Preference number: 6 (lower is better)
Translates to: RPSRESGTGQLY*PLPACNSGSTK
Trigger: TTTTGTGGAACCTGAGTTGCAAGCAGGGAGGGGCAAATACAACTGCCCTGTTCCCGATTCTCTAGATGGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337304.2
CDS CAA 90 bp TCTCTAGATCGGCCATCTAGAGAATCGGGAACAGGGCAGTTGTATTaGCCCCTCCCTGCTTGCAACTCAGGTTCCACAAAATGGACGCTC +
Preference number: 6 (lower is better)
Translates to: SLDRPSRESGTGQLY*PLPACNSGSTKWTL
Trigger: GAGCGTCCATTTTGTGGAACCTGAGTTGCAAGCAGGGAGGGGCAAATACAACTGCCCTGTTCCCGATTCTCTAGATGGCCGATCTAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337304.2
CDS TCA 72 bp GAAAGGAGAGAGGTGTACTACTTTACTAGGCTTCTATaGTCAGAGTCCGTTCTTTCCTTCGCCGCCGGAGCG +
Preference number: 6 (lower is better)
Translates to: ERREVYYFTRLL*SESVLSFAAGA
Trigger: CGCTCCGGCGGCGAAGGAAAGAACGGACTCTGATCATAGAAGCCTAGTAAAGTAGTACACCTCTCTCCTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404241.6
CDS GCA 72 bp GGCCATCTAGAGAATCGGGAACAGGGCAGTTGTATTTaGCCCTCCCTGCTTGCAACTCAGGTTCCACAAAAT +
Preference number: 6 (lower is better)
Translates to: GHLENREQGSCI*PSLLATQVPQN
Trigger: ATTTTGTGGAACCTGAGTTGCAAGCAGGGAGGGGCAAATACAACTGCCCTGTTCCCGATTCTCTAGATGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337304.2
CDS CCA 72 bp GGGCGTAGCTGTGACGAGAAAAGGAGTTTGTTCTTATaGCCTCACGAAAGGAGAGAGGTGTACTACTTTACT +
Preference number: 6 (lower is better)
Translates to: GRSCDEKRSLFL*PHERREVYYFT
Trigger: AGTAAAGTAGTACACCTCTCTCCTTTCGTGAGGCCATAAGAACAAACTCCTTTTCTCGTCACAGCTACGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404241.6