RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ATF3 (Homo sapiens)

Ensembl gene IDs: ENSG00000162772

Ensembl transcript IDs: ENST00000336937.8, ENST00000341491.9, ENST00000366981.8, ENST00000366983.5, ENST00000366985.5, ENST00000366987.6, ENST00000464547.5, ENST00000465155.5, ENST00000492118.2, ENST00000613104.1, ENST00000613954.4

Found 390 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCCCTGGTCCAAGACCCACTCTGGGGCAGAATGGGAAGGGCCTGCTaGATCACTGCAGGCCCTCCCGCCTTGATGGTTCTCTGCTGCTGG +
Preference number: 1 (lower is better)
Translates to: ALVQDPLWGRMGRAC*ITAGPPALMVLCCW
Trigger: CCAGCAGCAGAGAACCATCAAGGCGGGAGGGCCTGCAGTGATTCAGCAGGCCCTTCCCATTCTGCCCCAGAGTGGGTCTTGGACCAGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
3UTR TCA 90 bp GCAGAATGGGAAGGGCCTGCTGAATCACTGCAGGCCCTCCCGCCTTaGTGGTTCTCTGCTGCTGGGATTCTAGAGGTACACAGGAAGACA +
Preference number: 1 (lower is better)
Translates to: AEWEGPAESLQALPP*WFSAAGILEVHRKT
Trigger: TGTCTTCCTGTGTACCTCTAGAATCCCAGCAGCAGAGAACCATCAAGGCGGGAGGGCCTGCAGTGATTCAGCAGGCCCTTCCCATTCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613104.1
ENST00000613954.4
3UTR TCA 90 bp TGGAACATAAGAATGGCCAGTGTGTTAAGGCCTAAATCCTGGAGTTaGGGCAAAGATGCACTTGCCCTGGTCCAAGACCCACTCTGGGGC +
Preference number: 1 (lower is better)
Translates to: WNIRMASVLRPKSWS*GKDALALVQDPLWG
Trigger: GCCCCAGAGTGGGTCTTGGACCAGGGCAAGTGCATCTTTGCCTCAACTCCAGGATTTAGGCCTTAACACACTGGCCATTCTTATGTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
3UTR TCA 90 bp TTGACATCCAATAATGCTAAAGCCTGGGTACCACCCAGGCTCCACTaGCTGTGGTTTCCAAACATCTCTCCACTGACTGTGGTTTTCAAC +
Preference number: 1 (lower is better)
Translates to: LTSNNAKAWVPPRLH*LWFPNISPLTVVFN
Trigger: GTTGAAAACCACAGTCAGTGGAGAGATGTTTGGAAACCACAGTCAGTGGAGCCTGGGTGGTACCCAGGCTTTAGCATTATTGGATGTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
3UTR CCA 90 bp TGTTCCTTCTTTTATCTGTTGGATAAAGAGGTTTCTCTCATCTTCTaGAGTCCTCCCATTCTGAGCCCGGACAATACACGTGGGCCGATG +
Preference number: 1 (lower is better)
Translates to: CSFFYLLDKEVSLIF*SPPILSPDNTRGPM
Trigger: CATCGGCCCACGTGTATTGTCCGGGCTCAGAATGGGAGGACTCCAGAAGATGAGAGAAACCTCTTTATCCAACAGATAAAAGAAGGAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366983.5
ENST00000464547.5
3UTR TCA 90 bp TTCTTTGGCTCTTCCAGCCTAGACACAACTCCTGACCTAAGACATTaGGTGGAGAGTCCTAACCCTTTGGAAGTTGAACTTTCTGCTTTC +
Preference number: 1 (lower is better)
Translates to: FFGSSSLDTTPDLRH*VESPNPLEVELSAF
Trigger: GAAAGCAGAAAGTTCAACTTCCAAAGGGTTAGGACTCTCCACTCAATGTCTTAGGTCAGGAGTTGTGTCTAGGCTGGAAGAGCCAAAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
3UTR GCA 90 bp TGCTTTCTTCCTGTGACTTTGGAACTGAGTTTGCAACAGAGGACCTaGCATCATACTGCCCATGGATTTTGTGTTAACGCTGGGAGAATT +
Preference number: 1 (lower is better)
Translates to: CFLPVTLELSLQQRT*HHTAHGFCVNAGRI
Trigger: AATTCTCCCAGCGTTAACACAAAATCCATGGGCAGTATGATGGCAGGTCCTCTGTTGCAAACTCAGTTCCAAAGTCACAGGAAGAAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
3UTR TCA 90 bp TACCACCCAGGCTCCACTGACTGTGGTTTCCAAACATCTCTCCACTaGCTGTGGTTTTCAACCACAAGGAAAGGAAAATGGAATATTCTT +
Preference number: 1 (lower is better)
Translates to: YHPGSTDCGFQTSLH*LWFSTTRKGKWNIL
Trigger: AAGAATATTCCATTTTCCTTTCCTTGTGGTTGAAAACCACAGTCAGTGGAGAGATGTTTGGAAACCACAGTCAGTGGAGCCTGGGTGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
3UTR-3UTR CCA 90 bp CCAGCTTCTCCGACTCCTGGGGGACAAGCAACAGAGGCATCAAGAAAGGAGCCAATGCAGGGGTGTACCTaGGACACACCGGGGCTCATC +
Preference number: 2 (lower is better)
Translates to: PASPTPGGQATEASRKEPMQGCT*DTPGLI
Trigger: GATGAGCCCCGGTGTGTCCCAGGTACACCCCTGCAT...TGGCTCCTTTCTTGATGCCTCTGTTGCTTGTCCCCCAGGAGTCGGAGAAGCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000366983.5
3UTR-3UTR TCA 90 bp AAGACCCACTCTGGGGCAGAATGGGAAGGGCCTGCTGAATCACTGCAGGCCCTCAAAATGAGGATTCAATaGGGACTCCCCAGTCGCCCC +
Preference number: 2 (lower is better)
Translates to: KTHSGAEWEGPAESLQALKMRIQ*GLPSRP
Trigger: GGGGCGACTGGGGAGTCCTCATTGAATCCTCATTTT...GAGGGCCTGCAGTGATTCAGCAGGCCCTTCCCATTCTGCCCCAGAGTGGGTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613104.1
ENST00000613954.4
3UTR-3UTR TCA 90 bp TGGAGTCCTCCCATTCTGAGCCCGGACAATACACGTGGGCCGATGAAGGTTGAGGCTGCTTCTCGTTCTTaGGCTCCTCAATCTGAGCCT +
Preference number: 2 (lower is better)
Translates to: WSPPILSPDNTRGPMKVEAASRS*APQSEP
Trigger: AGGCTCAGATTGAGGAGCTCAAGAACGAGAAGCAGC...CTCAACCTTCATCGGCCCACGTGTATTGTCCGGGCTCAGAATGGGAGGACTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366983.5
ENST00000464547.5
3UTR-3UTR CCA 90 bp TCCAAGACCCACTCTGGGGCAGAATGGGAAGGGCCTGCTGAATCACTGCAGGCCATGGTTCTCTGCTGCTaGGATTCTAGAGGTACACAG +
Preference number: 2 (lower is better)
Translates to: SKTHSGAEWEGPAESLQAMVLCC*DSRGTQ
Trigger: CTGTGTACCTCTAGAATCCCAGCAGCAGAGAACCAT...GGCCTGCAGTGATTCAGCAGGCCCTTCCCATTCTGCCCCAGAGTGGGTCTTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613104.1
ENST00000613954.4
3UTR-3UTR GCA 90 bp GGGACACACCGGGGCTCATCAAGCTGCGAGAGGAAGATGGGAGATGGGAGAGCACTGGGTTTAGGAAAATaGAGACCCTCTTCTTCAGAG +
Preference number: 2 (lower is better)
Translates to: GTHRGSSSCERKMGDGRALGLGK*RPSSSE
Trigger: CTCTGAAGAAGAGGGTCTGCATTTTCCTAAACCCAG...TGCTCTCCCATCTCCCATCTTCCTCTCGCAGCTTGATGAGCCCCGGTGTGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336937.8
ENST00000366983.5
ENST00000464547.5
3UTR-3UTR GCA 90 bp AAGACCCACTCTGGGGCAGAATGGGAAGGGCCTGCTGAATCACTGCAGGCCCTCTTGATGGTTCTCTGCTaGTGGGATTCTAGAGGTACA +
Preference number: 2 (lower is better)
Translates to: KTHSGAEWEGPAESLQALLMVLC*WDSRGT
Trigger: TGTACCTCTAGAATCCCAGCAGCAGAGAACCATCAA...GAGGGCCTGCAGTGATTCAGCAGGCCCTTCCCATTCTGCCCCAGAGTGGGTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613104.1
ENST00000613954.4
3UTR-3UTR GCA 90 bp TCACTAAATGCTGTTCTCACTCCACATCCCCTACGAGTGACAATGGTAGCCACGGGCCTGCTGAATCACTaGAGGCCCTCCCGCCTTGAT +
Preference number: 2 (lower is better)
Translates to: SLNAVLTPHPLRVTMVATGLLNH*RPSRLD
Trigger: ATCAAGGCGGGAGGGCCTGCAGTGATTCAGCAGGCC...CGTGGCTACCATTGTCACTCGTAGGGGATGTGGAGTGAGAACAGCATTTAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
3UTR-3UTR CCA 90 bp TCCAAGACCCACTCTGGGGCAGAATGGGAAGGGCCTGCTGAATCACTGCAGGCCAAGACAGCTCTCCAATaGCTTCAGGGTTTTGGGTAT +
Preference number: 2 (lower is better)
Translates to: SKTHSGAEWEGPAESLQAKTALQ*LQGFGY
Trigger: ATACCCAAAACCCTGAAGCCATTGGAGAGCTGTCTT...GGCCTGCAGTGATTCAGCAGGCCCTTCCCATTCTGCCCCAGAGTGGGTCTTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613104.1
ENST00000613954.4
3UTR-3UTR TCA 90 bp CGTGGGCCGATGAAGGTTGAGCATGTATATCAAATGCTGCTTCTCGTTCTTGAGTCAGAGAAACCCTGGTaGTGCCACAGAGGCGGCCTG +
Preference number: 2 (lower is better)
Translates to: RGPMKVEHVYQMLLLVLESEKPW*CHRGGL
Trigger: CAGGCCGCCTCTGTGGCATCACCAGGGTTTCTCTGA...CTCAAGAACGAGAAGCAGCATTTGATATACATGCTCAACCTTCATCGGCCCACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366983.5
ENST00000464547.5
3UTR-3UTR TCA 90 bp CCAAGACCCACTCTGGGGCAGAATGGGAAGGGCCTGCTGAATCACTGCAGGCCCGTTTTGGGTATAAAATaGGGATTCAATGAGGACTCC +
Preference number: 2 (lower is better)
Translates to: PRPTLGQNGKGLLNHCRPVLGIK*GFNEDS
Trigger: GGAGTCCTCATTGAATCCTCATTTTATACCCAAAAC...GGGCCTGCAGTGATTCAGCAGGCCCTTCCCATTCTGCCCCAGAGTGGGTCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613104.1
ENST00000613954.4
3UTR-3UTR CCA 90 bp CGTGGGCCGATGAAGGTTGAGCATGTATATCAAATGCTGCTTCTCGTTCTTGAGAGCTTCTCCGACTCCTaGGACACACCGGGGCTCATC +
Preference number: 2 (lower is better)
Translates to: RGPMKVEHVYQMLLLVLESFSDS*DTPGLI
Trigger: GATGAGCCCCGGTGTGTCCCAGGAGTCGGAGAAGCT...CTCAAGAACGAGAAGCAGCATTTGATATACATGCTCAACCTTCATCGGCCCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464547.5
3UTR-3UTR TCA 90 bp CTCTGCTGCTGGGATTCTAGAGGTACACAGGAAGACAGCTCTCCAATGGCTTCAAAAATGAGGATTCAATaGGGACTCCCCAGTCGCCCC +
Preference number: 2 (lower is better)
Translates to: LCCWDSRGTQEDSSPMASKMRIQ*GLPSRP
Trigger: GGGGCGACTGGGGAGTCCTCATTGAATCCTCATTTT...TGAAGCCATTGGAGAGCTGTCTTCCTGTGTACCTCTAGAATCCCAGCAGCAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613104.1
ENST00000613954.4
3UTR-3UTR GCA 90 bp CAGCATTCACACTTTCCAGCTTCTCCGACTCCTGGGACACACCGGGGCTCATCACTGGGTTTAGGAAAATaGAGACCCTCTTCTTCAGAG +
Preference number: 2 (lower is better)
Translates to: QHSHFPASPTPGTHRGSSLGLGK*RPSSSE
Trigger: CTCTGAAGAAGAGGGTCTGCATTTTCCTAAACCCAG...TGATGAGCCCCGGTGTGTCCCAGGAGTCGGAGAAGCTGGAAAGTGTGAATGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464547.5
3UTR-3UTR GCA 90 bp AATGCTGTTCTCACTCCACATCCCCTACGAGTGACAATGGTAGCCACGGTGAAGAGGCAAAGATGCACTTaGCCTGGTCCAAGACCCACT +
Preference number: 2 (lower is better)
Translates to: NAVLTPHPLRVTMVATVKRQRCT*PGPRPT
Trigger: AGTGGGTCTTGGACCAGGGCAAGTGCATCTTTGCCT...CTTCACCGTGGCTACCATTGTCACTCGTAGGGGATGTGGAGTGAGAACAGCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
3UTR-3UTR CCA 90 bp CAATCTGAGCCTTCAGTTCAGCATTCACACTTTCCAGCTTCTCCGACTCCTGGGGAGGAAGATGGGAGATaGGAGAGCAGCACTGGGTTT +
Preference number: 2 (lower is better)
Translates to: QSEPSVQHSHFPASPTPGEEDGR*ESSTGF
Trigger: AAACCCAGTGCTGCTCTCCCATCTCCCATCTTCCTC...CCCAGGAGTCGGAGAAGCTGGAAAGTGTGAATGCTGAACTGAAGGCTCAGATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366983.5
ENST00000464547.5
3UTR-3UTR TCA 90 bp GCAGGCCCTCCCGCCTTGATGGTTCTCTGCTGCTGGGATTCTAGAGGTACACAGGTTTTGGGTATAAAATaGGGATTCAATGAGGACTCC +
Preference number: 2 (lower is better)
Translates to: AGPPALMVLCCWDSRGTQVLGIK*GFNEDS
Trigger: GGAGTCCTCATTGAATCCTCATTTTATACCCAAAAC...CTGTGTACCTCTAGAATCCCAGCAGCAGAGAACCATCAAGGCGGGAGGGCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613104.1
ENST00000613954.4
3UTR-3UTR GCA 90 bp CTGAGCCTTCAGTTCAGCATTCACACTTTCCAGCTTCTCCGACTCCTGGGGGACCTGGGTTTAGGAAAATaGAGACCCTCTTCTTCAGAG +
Preference number: 2 (lower is better)
Translates to: LSLQFSIHTFQLLRLLGDLGLGK*RPSSSE
Trigger: CTCTGAAGAAGAGGGTCTGCATTTTCCTAAACCCAG...GTCCCCCAGGAGTCGGAGAAGCTGGAAAGTGTGAATGCTGAACTGAAGGCTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366983.5
3UTR-3UTR GCA 90 bp CGTGGGCCGATGAAGGTTGAGCATGTATATCAAATGCTGCTTCTCGTTCTTGAGCGGGGCTCATCAAGCTaGGAGAGGAAGATGGGAGAT +
Preference number: 2 (lower is better)
Translates to: RGPMKVEHVYQMLLLVLERGSSS*ERKMGD
Trigger: ATCTCCCATCTTCCTCTCGCAGCTTGATGAGCCCCG...CTCAAGAACGAGAAGCAGCATTTGATATACATGCTCAACCTTCATCGGCCCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366983.5
ENST00000464547.5
3UTR-3UTR TCA 90 bp TGTGACACAAACATCGGAAGAGTACATTGCCTAGTTTTCTTGCACACACAATTTCAGGCCCTCCCGCCTTaGTGGTTCTCTGCTGCTGGG +
Preference number: 2 (lower is better)
Translates to: CDTNIGRVHCLVFLHTQFQALPP*WFSAAG
Trigger: CCCAGCAGCAGAGAACCATCAAGGCGGGAGGGCCTG...AAATTGTGTGTGCAAGAAAACTAGGCAATGTACTCTTCCGATGTTTGTGTCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
3UTR-3UTR TCA 90 bp AAAGTCACATCAGTGTTGTGTGACACAAACATCGGAAGAGTACATTGCCTAGTTATGGGAAGGGCCTGCTaGATCACTGCAGGCCCTCCC +
Preference number: 2 (lower is better)
Translates to: KVTSVLCDTNIGRVHCLVMGRAC*ITAGPP
Trigger: GGGAGGGCCTGCAGTGATTCAGCAGGCCCTTCCCAT...AACTAGGCAATGTACTCTTCCGATGTTTGTGTCACACAACACTGATGTGACTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
3UTR-3UTR GCA 90 bp CTTCTGGAGTCCTCCCATTCTGAGCCCGGACAATACACGTGGGCCGATGAAGGTAGCATGTATATCAAATaGTGCTTCTCGTTCTTGAGC +
Preference number: 2 (lower is better)
Translates to: LLESSHSEPGQYTWADEGSMYIK*CFSFLS
Trigger: GCTCAAGAACGAGAAGCAGCATTTGATATACATGCT...ACCTTCATCGGCCCACGTGTATTGTCCGGGCTCAGAATGGGAGGACTCCAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366983.5
ENST00000464547.5
3UTR-3UTR TCA 90 bp TGTGACACAAACATCGGAAGAGTACATTGCCTAGTTTTCTTGCACACACAATTTATGGGAAGGGCCTGCTaGATCACTGCAGGCCCTCCC +
Preference number: 2 (lower is better)
Translates to: CDTNIGRVHCLVFLHTQFMGRAC*ITAGPP
Trigger: GGGAGGGCCTGCAGTGATTCAGCAGGCCCTTCCCAT...AAATTGTGTGTGCAAGAAAACTAGGCAATGTACTCTTCCGATGTTTGTGTCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
3UTR-3UTR CCA 90 bp AATGCTGTTCTCACTCCACATCCCCTACGAGTGACAATGGTAGCCACGGTGAAGAAGACAGCTCTCCAATaGCTTCAGGGTTTTGGGTAT +
Preference number: 2 (lower is better)
Translates to: NAVLTPHPLRVTMVATVKKTALQ*LQGFGY
Trigger: ATACCCAAAACCCTGAAGCCATTGGAGAGCTGTCTT...CTTCACCGTGGCTACCATTGTCACTCGTAGGGGATGTGGAGTGAGAACAGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
3UTR-3UTR GCA 90 bp AAAGTCACATCAGTGTTGTGTGACACAAACATCGGAAGAGTACATTGCCTAGTTAGGTACAGACACTGCTaGCTGAATCCTAACGGTGGG +
Preference number: 2 (lower is better)
Translates to: KVTSVLCDTNIGRVHCLVRYRHC*LNPNGG
Trigger: CCCACCGTTAGGATTCAGGCAGCAGTGTCTGTACCT...AACTAGGCAATGTACTCTTCCGATGTTTGTGTCACACAACACTGATGTGACTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
3UTR-3UTR TCA 90 bp TGTGACACAAACATCGGAAGAGTACATTGCCTAGTTTTCTTGCACACACAATTTCCTAAATCCTGGAGTTaGGGCAAAGATGCACTTGCC +
Preference number: 2 (lower is better)
Translates to: CDTNIGRVHCLVFLHTQFPKSWS*GKDALA
Trigger: GGCAAGTGCATCTTTGCCTCAACTCCAGGATTTAGG...AAATTGTGTGTGCAAGAAAACTAGGCAATGTACTCTTCCGATGTTTGTGTCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
3UTR-3UTR GCA 90 bp TGTGACACAAACATCGGAAGAGTACATTGCCTAGTTTTCTTGCACACACAATTTGAGTTGAGGCAAAGATaGACTTGCCCTGGTCCAAGA +
Preference number: 2 (lower is better)
Translates to: CDTNIGRVHCLVFLHTQFELRQR*TCPGPR
Trigger: TCTTGGACCAGGGCAAGTGCATCTTTGCCTCAACTC...AAATTGTGTGTGCAAGAAAACTAGGCAATGTACTCTTCCGATGTTTGTGTCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
3UTR-3UTR GCA 90 bp AAAGTCACATCAGTGTTGTGTGACACAAACATCGGAAGAGTACATTGCCTAGTTCACAACCCTGGCCGTTaGACAACTTCACTAAATGCT +
Preference number: 2 (lower is better)
Translates to: KVTSVLCDTNIGRVHCLVHNPGR*TTSLNA
Trigger: AGCATTTAGTGAAGTTGTGCAACGGCCAGGGTTGTG...AACTAGGCAATGTACTCTTCCGATGTTTGTGTCACACAACACTGATGTGACTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
3UTR-3UTR CCA 90 bp AAAGTCACATCAGTGTTGTGTGACACAAACATCGGAAGAGTACATTGCCTAGTTATGGTTCTCTGCTGCTaGGATTCTAGAGGTACACAG +
Preference number: 2 (lower is better)
Translates to: KVTSVLCDTNIGRVHCLVMVLCC*DSRGTQ
Trigger: CTGTGTACCTCTAGAATCCCAGCAGCAGAGAACCAT...AACTAGGCAATGTACTCTTCCGATGTTTGTGTCACACAACACTGATGTGACTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
3UTR-3UTR GCA 90 bp AAAGTCACATCAGTGTTGTGTGACACAAACATCGGAAGAGTACATTGCCTAGTTCACAACTTCACTAAATaGTGTTCTCACTCCACATCC +
Preference number: 2 (lower is better)
Translates to: KVTSVLCDTNIGRVHCLVHNFTK*CSHSTS
Trigger: GGATGTGGAGTGAGAACAGCATTTAGTGAAGTTGTG...AACTAGGCAATGTACTCTTCCGATGTTTGTGTCACACAACACTGATGTGACTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
3UTR CAA 90 bp GTGTTGTGTGACACAAACATCGGAAGAGTACATTGCCTAGTTTTCTaGCACACACAATTTCTGGACATAACAGCATATTTGCTAGAAAGC +
Preference number: 2 (lower is better)
Translates to: VLCDTNIGRVHCLVF*HTQFLDITAYLLES
Trigger: GCTTTCTAGCAAATATGCTGTTATGTCCAGAAATTGTGTGTGCAAGAAAACTAGGCAATGTACTCTTCCGATGTTTGTGTCACACAACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
3UTR TCA 72 bp CAAGACCCACTCTGGGGCAGAATGGGAAGGGCCTGCTaGATCACTGCAGGCCCTCCCGCCTTGATGGTTCTC +
Preference number: 3 (lower is better)
Translates to: QDPLWGRMGRAC*ITAGPPALMVL
Trigger: GAGAACCATCAAGGCGGGAGGGCCTGCAGTGATTCAGCAGGCCCTTCCCATTCTGCCCCAGAGTGGGTCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613104.1
ENST00000613954.4
3UTR GCA 72 bp ACTCTGGGGCAGAATGGGAAGGGCCTGCTGAATCACTaGAGGCCCTCCCGCCTTGATGGTTCTCTGCTGCTG +
Preference number: 3 (lower is better)
Translates to: TLGQNGKGLLNH*RPSRLDGSLLL
Trigger: CAGCAGCAGAGAACCATCAAGGCGGGAGGGCCTGCAGTGATTCAGCAGGCCCTTCCCATTCTGCCCCAGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613104.1
ENST00000613954.4
3UTR CCA 72 bp ACTGCAGGCCCTCCCGCCTTGATGGTTCTCTGCTGCTaGGATTCTAGAGGTACACAGGAAGACAGCTCTCCA +
Preference number: 3 (lower is better)
Translates to: TAGPPALMVLCC*DSRGTQEDSSP
Trigger: TGGAGAGCTGTCTTCCTGTGTACCTCTAGAATCCCAGCAGCAGAGAACCATCAAGGCGGGAGGGCCTGCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613104.1
ENST00000613954.4
3UTR GCA 72 bp ATCACTGCAGGCCCTCCCGCCTTGATGGTTCTCTGCTaGTGGGATTCTAGAGGTACACAGGAAGACAGCTCT +
Preference number: 3 (lower is better)
Translates to: ITAGPPALMVLC*WDSRGTQEDSS
Trigger: AGAGCTGTCTTCCTGTGTACCTCTAGAATCCCAGCAGCAGAGAACCATCAAGGCGGGAGGGCCTGCAGTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613104.1
ENST00000613954.4
3UTR CCA 72 bp CTAAATCCTGGAGTTGAGGCAAAGATGCACTTGCCCTaGTCCAAGACCCACTCTGGGGCAGAATGGGAAGGG +
Preference number: 3 (lower is better)
Translates to: LNPGVEAKMHLP*SKTHSGAEWEG
Trigger: CCCTTCCCATTCTGCCCCAGAGTGGGTCTTGGACCAGGGCAAGTGCATCTTTGCCTCAACTCCAGGATTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
3UTR CCA 72 bp GATGAAAGGCGGGCAGGACACCAGCTGGGGGCCATCTaGAACATAAGAATGGCCAGTGTGTTAAGGCCTAAA +
Preference number: 3 (lower is better)
Translates to: DERRAGHQLGAI*NIRMASVLRPK
Trigger: TTTAGGCCTTAACACACTGGCCATTCTTATGTTCCAGATGGCCCCCAGCTGGTGTCCTGCCCGCCTTTCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
3UTR CCA 72 bp AGTTCAGCATTCACACTTTCCAGCTTCTCCGACTCCTaGGGGACAAGCAACAGAGGCATCAAGAAAGGAGCC +
Preference number: 3 (lower is better)
Translates to: SSAFTLSSFSDS*GTSNRGIKKGA
Trigger: GGCTCCTTTCTTGATGCCTCTGTTGCTTGTCCCCCAGGAGTCGGAGAAGCTGGAAAGTGTGAATGCTGAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366983.5
3UTR TCA 72 bp AGAATGGCCAGTGTGTTAAGGCCTAAATCCTGGAGTTaGGGCAAAGATGCACTTGCCCTGGTCCAAGACCCA +
Preference number: 3 (lower is better)
Translates to: RMASVLRPKSWS*GKDALALVQDP
Trigger: TGGGTCTTGGACCAGGGCAAGTGCATCTTTGCCTCAACTCCAGGATTTAGGCCTTAACACACTGGCCATTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
3UTR-3UTR CAA 90 bp TGTGACACAAACATCGGAAGAGTACATTGCCTAGTTTTCTTGCACACACAATTTGCAGGCCCTCCCGCCTaGATGGTTCTCTGCTGCTGG +
Preference number: 3 (lower is better)
Translates to: CDTNIGRVHCLVFLHTQFAGPPA*MVLCCW
Trigger: CCAGCAGCAGAGAACCATCAAGGCGGGAGGGCCTGC...AAATTGTGTGTGCAAGAAAACTAGGCAATGTACTCTTCCGATGTTTGTGTCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
3UTR TCA 72 bp AATAATGCTAAAGCCTGGGTACCACCCAGGCTCCACTaGCTGTGGTTTCCAAACATCTCTCCACTGACTGTG +
Preference number: 3 (lower is better)
Translates to: NNAKAWVPPRLH*LWFPNISPLTV
Trigger: CACAGTCAGTGGAGAGATGTTTGGAAACCACAGTCAGTGGAGCCTGGGTGGTACCCAGGCTTTAGCATTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
3UTR GCA 72 bp AAAGCACAACCCTGGCCGTTGCACAACTTCACTAAATaGTGTTCTCACTCCACATCCCCTACGAGTGACAAT +
Preference number: 3 (lower is better)
Translates to: KAQPWPLHNFTK*CSHSTSPTSDN
Trigger: ATTGTCACTCGTAGGGGATGTGGAGTGAGAACAGCATTTAGTGAAGTTGTGCAACGGCCAGGGTTGTGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
3UTR GCA 72 bp CCTGTGACTTTGGAACTGAGTTTGCAACAGAGGACCTaGCATCATACTGCCCATGGATTTTGTGTTAACGCT +
Preference number: 3 (lower is better)
Translates to: PVTLELSLQQRT*HHTAHGFCVNA
Trigger: AGCGTTAACACAAAATCCATGGGCAGTATGATGGCAGGTCCTCTGTTGCAAACTCAGTTCCAAAGTCACAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
3UTR TCA 72 bp TCTTCCAGCCTAGACACAACTCCTGACCTAAGACATTaGGTGGAGAGTCCTAACCCTTTGGAAGTTGAACTT +
Preference number: 3 (lower is better)
Translates to: SSSLDTTPDLRH*VESPNPLEVEL
Trigger: AAGTTCAACTTCCAAAGGGTTAGGACTCTCCACTCAATGTCTTAGGTCAGGAGTTGTGTCTAGGCTGGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
3UTR CCA 72 bp GGGATTCTAGAGGTACACAGGAAGACAGCTCTCCAATaGCTTCAGGGTTTTGGGTATAAAATGAGGATTCAA +
Preference number: 3 (lower is better)
Translates to: GILEVHRKTALQ*LQGFGYKMRIQ
Trigger: TTGAATCCTCATTTTATACCCAAAACCCTGAAGCCATTGGAGAGCTGTCTTCCTGTGTACCTCTAGAATCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613104.1
ENST00000613954.4
3UTR CCA 72 bp TTTTATCTGTTGGATAAAGAGGTTTCTCTCATCTTCTaGAGTCCTCCCATTCTGAGCCCGGACAATACACGT +
Preference number: 3 (lower is better)
Translates to: FYLLDKEVSLIF*SPPILSPDNTR
Trigger: ACGTGTATTGTCCGGGCTCAGAATGGGAGGACTCCAGAAGATGAGAGAAACCTCTTTATCCAACAGATAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366983.5
ENST00000464547.5
CDS-3UTR TCA 90 bp AAGACCCACTCTGGGGCAGAATGGGAAGGGCCTGCTGAATCACTGCAGGCCCTCCAGGCCCTCCCGCCTTaGTGGTTCTCTGCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: KTHSGAEWEGPAESLQALQALPP*WFSAAG
Trigger: CCCAGCAGCAGAGAACCATCAAGGCGGGAGGGCCTG...GAGGGCCTGCAGTGATTCAGCAGGCCCTTCCCATTCTGCCCCAGAGTGGGTCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613104.1
ENST00000613954.4
CDS-3UTR GCA 90 bp AGACCCACTCTGGGGCAGAATGGGAAGGGCCTGCTGAATCACTGCAGGCCCTCCGGCCTGCTGAATCACTaGAGGCCCTCCCGCCTTGAT +
Preference number: 4 (lower is better)
Translates to: RPTLGQNGKGLLNHCRPSGLLNH*RPSRLD
Trigger: ATCAAGGCGGGAGGGCCTGCAGTGATTCAGCAGGCC...GGAGGGCCTGCAGTGATTCAGCAGGCCCTTCCCATTCTGCCCCAGAGTGGGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613104.1
ENST00000613954.4
CDS-3UTR CCA 90 bp AGACCCACTCTGGGGCAGAATGGGAAGGGCCTGCTGAATCACTGCAGGCCCTCCGGCTGCGTGCGACTGTaGCTTGGAGAGCGTTGCATC +
Preference number: 4 (lower is better)
Translates to: RPTLGQNGKGLLNHCRPSGCVRL*LGERCI
Trigger: GATGCAACGCTCTCCAAGCCACAGTCGCACGCAGCC...GGAGGGCCTGCAGTGATTCAGCAGGCCCTTCCCATTCTGCCCCAGAGTGGGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613954.4
CDS-3UTR TCA 90 bp CTGGGACACACCGGGGCTCATCAAGCTGCGAGAGGAAGATGGGAGATGGGAGAGTCAGAGAAACCCTGGTaGTGCCACAGAGGCGGCCTG +
Preference number: 4 (lower is better)
Translates to: LGHTGAHQAARGRWEMGESEKPW*CHRGGL
Trigger: CAGGCCGCCTCTGTGGCATCACCAGGGTTTCTCTGA...CTCTCCCATCTCCCATCTTCCTCTCGCAGCTTGATGAGCCCCGGTGTGTCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336937.8
ENST00000366983.5
ENST00000464547.5
CDS-3UTR TCA 90 bp TCCAAGACCCACTCTGGGGCAGAATGGGAAGGGCCTGCTGAATCACTGCAGGCCCTGTCCTCCTCTTGCTaGCAAGCTCTTCTGGCCACC +
Preference number: 4 (lower is better)
Translates to: SKTHSGAEWEGPAESLQALSSSC*QALLAT
Trigger: GGTGGCCAGAAGAGCTTGTCAGCAAGAGGAGGACAG...GGCCTGCAGTGATTCAGCAGGCCCTTCCCATTCTGCCCCAGAGTGGGTCTTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
CDS-3UTR TCA 90 bp AGCTTCTCCGACTCCTGGGACACACCGGGGCTCATCAAGCTGCGAGAGGAAGATTCAGAGAAACCCTGGTaGTGCCACAGAGGCGGCCTG +
Preference number: 4 (lower is better)
Translates to: SFSDSWDTPGLIKLREEDSEKPW*CHRGGL
Trigger: CAGGCCGCCTCTGTGGCATCACCAGGGTTTCTCTGA...ATCTTCCTCTCGCAGCTTGATGAGCCCCGGTGTGTCCCAGGAGTCGGAGAAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464547.5
CDS-3UTR GCA 90 bp CCAAGACCCACTCTGGGGCAGAATGGGAAGGGCCTGCTGAATCACTGCAGGCCCGTTGAAGCATCATTTTaGTCCAGGCTCCGCTCGGGG +
Preference number: 4 (lower is better)
Translates to: PRPTLGQNGKGLLNHCRPVEASF*SRLRSG
Trigger: CCCCGAGCGGAGCCTGGAGCAAAATGATGCTTCAAC...GGGCCTGCAGTGATTCAGCAGGCCCTTCCCATTCTGCCCCAGAGTGGGTCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341491.9
CDS-3UTR GCA 90 bp GACACACCGGGGCTCATCAAGCTGCGAGAGGAAGATGGGAGATGGGAGAGCAGCGGCCTTGGGAGTTTCTaGAGGCACTCCGTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: DTPGLIKLREEDGRWESSGLGSF*RHSVFS
Trigger: GGAGAAGACGGAGTGCCTGCAGAAACTCCCAAGGCC...GCTGCTCTCCCATCTCCCATCTTCCTCTCGCAGCTTGATGAGCCCCGGTGTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336937.8
ENST00000366983.5
ENST00000464547.5
CDS-3UTR CCA 90 bp CTGGGACACACCGGGGCTCATCAAGCTGCGAGAGGAAGATGGGAGATGGGAGAGACAGGCAGGGGACGATaGCAGAAGCACTCACTTCCG +
Preference number: 4 (lower is better)
Translates to: LGHTGAHQAARGRWEMGETGRGR*QKHSLP
Trigger: CGGAAGTGAGTGCTTCTGCCATCGTCCCCTGCCTGT...CTCTCCCATCTCCCATCTTCCTCTCGCAGCTTGATGAGCCCCGGTGTGTCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366983.5
ENST00000464547.5
CDS-3UTR CCA 90 bp ACACACCGGGGCTCATCAAGCTGCGAGAGGAAGATGGGAGATGGGAGAGCAGCAAGCTTCTCCGACTCCTaGGACACACCGGGGCTCATC +
Preference number: 4 (lower is better)
Translates to: THRGSSSCERKMGDGRAASFSDS*DTPGLI
Trigger: GATGAGCCCCGGTGTGTCCCAGGAGTCGGAGAAGCT...TGCTGCTCTCCCATCTCCCATCTTCCTCTCGCAGCTTGATGAGCCCCGGTGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464547.5
CDS-3UTR TCA 90 bp CCAAGACCCACTCTGGGGCAGAATGGGAAGGGCCTGCTGAATCACTGCAGGCCCACCTGGCCTGGGTGTTaGAGCATCATTTTGCTCCAG +
Preference number: 4 (lower is better)
Translates to: PRPTLGQNGKGLLNHCRPTWPGC*SIILLQ
Trigger: CTGGAGCAAAATGATGCTTCAACACCCAGGCCAGGT...GGGCCTGCAGTGATTCAGCAGGCCCTTCCCATTCTGCCCCAGAGTGGGTCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341491.9
CDS-3UTR TCA 90 bp ACACACCGGGGCTCATCAAGCTGCGAGAGGAAGATGGGAGATGGGAGAGCAGCAATCCTCAAACACCAGTaGCCCAGGAGGGGACAGGCA +
Preference number: 4 (lower is better)
Translates to: THRGSSSCERKMGDGRAAILKHQ*PRRGQA
Trigger: TGCCTGTCCCCTCCTGGGTCACTGGTGTTTGAGGAT...TGCTGCTCTCCCATCTCCCATCTTCCTCTCGCAGCTTGATGAGCCCCGGTGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366983.5
ENST00000464547.5
CDS-3UTR TCA 90 bp CACCGGGGCTCATCAAGCTGCGAGAGGAAGATGGGAGATGGGAGAGCAGCACTGGTCGCTGACAGTGACTaGTTCCAGCGCAGAGGACAT +
Preference number: 4 (lower is better)
Translates to: HRGSSSCERKMGDGRAALVADSD*FQRRGH
Trigger: ATGTCCTCTGCGCTGGAATCAGTCACTGTCAGCGAC...CAGTGCTGCTCTCCCATCTCCCATCTTCCTCTCGCAGCTTGATGAGCCCCGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336937.8
ENST00000366983.5
ENST00000464547.5
CDS-3UTR TCA 90 bp AAGACCCACTCTGGGGCAGAATGGGAAGGGCCTGCTGAATCACTGCAGGCCCTCGTCGCTGACAGTGACTaGTTCCAGCGCAGAGGACAT +
Preference number: 4 (lower is better)
Translates to: KTHSGAEWEGPAESLQALVADSD*FQRRGH
Trigger: ATGTCCTCTGCGCTGGAATCAGTCACTGTCAGCGAC...GAGGGCCTGCAGTGATTCAGCAGGCCCTTCCCATTCTGCCCCAGAGTGGGTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613104.1
ENST00000613954.4
CDS-3UTR TCA 90 bp GCAGGCCCTCCCGCCTTGATGGTTCTCTGCTGCTGGGATTCTAGAGGTACACAGGGAGTCCTCCCATTCTaGGCCCGGACAATACACGTG +
Preference number: 4 (lower is better)
Translates to: AGPPALMVLCCWDSRGTQGVLPF*ARTIHV
Trigger: CACGTGTATTGTCCGGGCTCAGAATGGGAGGACTCC...CTGTGTACCTCTAGAATCCCAGCAGCAGAGAACCATCAAGGCGGGAGGGCCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613104.1
ENST00000613954.4
CDS-3UTR TCA 90 bp CCTCCCGCCTTGATGGTTCTCTGCTGCTGGGATTCTAGAGGTACACAGGAAGACATGGGAAGGGCCTGCTaGATCACTGCAGGCCCTCCC +
Preference number: 4 (lower is better)
Translates to: PPALMVLCCWDSRGTQEDMGRAC*ITAGPP
Trigger: GGGAGGGCCTGCAGTGATTCAGCAGGCCCTTCCCAT...GTCTTCCTGTGTACCTCTAGAATCCCAGCAGCAGAGAACCATCAAGGCGGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613104.1
ENST00000613954.4
CDS-3UTR TCA 90 bp AAGACCCACTCTGGGGCAGAATGGGAAGGGCCTGCTGAATCACTGCAGGCCCTCACAGACACTGCTGCCTaGATCCTAACGGTGGGCATC +
Preference number: 4 (lower is better)
Translates to: KTHSGAEWEGPAESLQALTDTAA*ILTVGI
Trigger: GATGCCCACCGTTAGGATTCAGGCAGCAGTGTCTGT...GAGGGCCTGCAGTGATTCAGCAGGCCCTTCCCATTCTGCCCCAGAGTGGGTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
CDS-3UTR TCA 90 bp AAGACCCACTCTGGGGCAGAATGGGAAGGGCCTGCTGAATCACTGCAGGCCCTCCCACCCAGGCTCCACTaGCTGTGGTTTCCAAACATC +
Preference number: 4 (lower is better)
Translates to: KTHSGAEWEGPAESLQALPPRLH*LWFPNI
Trigger: GATGTTTGGAAACCACAGTCAGTGGAGCCTGGGTGG...GAGGGCCTGCAGTGATTCAGCAGGCCCTTCCCATTCTGCCCCAGAGTGGGTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
CDS-3UTR TCA 90 bp AGACCCACTCTGGGGCAGAATGGGAAGGGCCTGCTGAATCACTGCAGGCCCTCCTGTGGCCAGTGTGAGTaGCTTCTCACAGCTGCAAAC +
Preference number: 4 (lower is better)
Translates to: RPTLGQNGKGLLNHCRPSCGQCE*LLTAAN
Trigger: GTTTGCAGCTGTGAGAAGTCACTCACACTGGCCACA...GGAGGGCCTGCAGTGATTCAGCAGGCCCTTCCCATTCTGCCCCAGAGTGGGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
CDS-3UTR TCA 90 bp CCAAGACCCACTCTGGGGCAGAATGGGAAGGGCCTGCTGAATCACTGCAGGCCCTGTGGCCAGTGTGAGTaGCTTCTCACAGCTGCAAAC +
Preference number: 4 (lower is better)
Translates to: PRPTLGQNGKGLLNHCRPCGQCE*LLTAAN
Trigger: GTTTGCAGCTGTGAGAAGTCACTCACACTGGCCACA...GGGCCTGCAGTGATTCAGCAGGCCCTTCCCATTCTGCCCCAGAGTGGGTCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
CDS-3UTR GCA 90 bp AGACCCACTCTGGGGCAGAATGGGAAGGGCCTGCTGAATCACTGCAGGCCCTCCTTCTCCGACTCTTTCTaGAGGCACTCCGTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: RPTLGQNGKGLLNHCRPSFSDSF*RHSVFS
Trigger: GGAGAAGACGGAGTGCCTGCAGAAAGAGTCGGAGAA...GGAGGGCCTGCAGTGATTCAGCAGGCCCTTCCCATTCTGCCCCAGAGTGGGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613104.1
ENST00000613954.4
CDS-3UTR GCA 90 bp AGACCCACTCTGGGGCAGAATGGGAAGGGCCTGCTGAATCACTGCAGGCCCTCCCCCCCATACCACGACTaGTTAGCTCTGCAATGTTCC +
Preference number: 4 (lower is better)
Translates to: RPTLGQNGKGLLNHCRPSPPYHD*LALQCS
Trigger: GGAACATTGCAGAGCTAAGCAGTCGTGGTATGGGGG...GGAGGGCCTGCAGTGATTCAGCAGGCCCTTCCCATTCTGCCCCAGAGTGGGTCT
59% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613104.1
ENST00000613954.4
CDS-3UTR GCA 90 bp CTCTGCTGCTGGGATTCTAGAGGTACACAGGAAGACAGCTCTCCAATGGCTTCAGCGCGCCTGGCTGCGTaGGACTGTGGCTTGGAGAGC +
Preference number: 4 (lower is better)
Translates to: LCCWDSRGTQEDSSPMASARLAA*DCGLES
Trigger: GCTCTCCAAGCCACAGTCGCACGCAGCCAGGCGCGC...TGAAGCCATTGGAGAGCTGTCTTCCTGTGTACCTCTAGAATCCCAGCAGCAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613954.4
CDS-3UTR CCA 90 bp GCAGGCCCTCCCGCCTTGATGGTTCTCTGCTGCTGGGATTCTAGAGGTACACAGGCAGAGGACATCCGGTaGCAGAGGTGCTTGTTCTGG +
Preference number: 4 (lower is better)
Translates to: AGPPALMVLCCWDSRGTQAEDIR*QRCLFW
Trigger: CCAGAACAAGCACCTCTGCCACCGGATGTCCTCTGC...CTGTGTACCTCTAGAATCCCAGCAGCAGAGAACCATCAAGGCGGGAGGGCCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
CDS-3UTR CCA 90 bp AAGACCCACTCTGGGGCAGAATGGGAAGGGCCTGCTGAATCACTGCAGGCCCTCAAGATGCACTTGCCCTaGTCCAAGACCCACTCTGGG +
Preference number: 4 (lower is better)
Translates to: KTHSGAEWEGPAESLQALKMHLP*SKTHSG
Trigger: CCCAGAGTGGGTCTTGGACCAGGGCAAGTGCATCTT...GAGGGCCTGCAGTGATTCAGCAGGCCCTTCCCATTCTGCCCCAGAGTGGGTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
CDS-3UTR TCA 90 bp CTTCTGGAGTCCTCCCATTCTGAGCCCGGACAATACACGTGGGCCGATGAAGGTATCCTCAAACACCAGTaGCCCAGGAGGGGACAGGCA +
Preference number: 4 (lower is better)
Translates to: LLESSHSEPGQYTWADEGILKHQ*PRRGQA
Trigger: TGCCTGTCCCCTCCTGGGTCACTGGTGTTTGAGGAT...ACCTTCATCGGCCCACGTGTATTGTCCGGGCTCAGAATGGGAGGACTCCAGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366983.5
ENST00000464547.5
CDS-3UTR TCA 90 bp GGGATTCTAGAGGTACACAGGAAGACAGCTCTCCAATGGCTTCAGGGTTTTGGGCAGGCCCTCCCGCCTTaGTGGTTCTCTGCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: GILEVHRKTALQWLQGFGQALPP*WFSAAG
Trigger: CCCAGCAGCAGAGAACCATCAAGGCGGGAGGGCCTG...CCCAAAACCCTGAAGCCATTGGAGAGCTGTCTTCCTGTGTACCTCTAGAATCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613104.1
ENST00000613954.4
CDS-3UTR TCA 90 bp AGACCCACTCTGGGGCAGAATGGGAAGGGCCTGCTGAATCACTGCAGGCCCTCCCCTAAATCCTGGAGTTaGGGCAAAGATGCACTTGCC +
Preference number: 4 (lower is better)
Translates to: RPTLGQNGKGLLNHCRPSPKSWS*GKDALA
Trigger: GGCAAGTGCATCTTTGCCTCAACTCCAGGATTTAGG...GGAGGGCCTGCAGTGATTCAGCAGGCCCTTCCCATTCTGCCCCAGAGTGGGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
CDS-3UTR TCA 90 bp CCAAGACCCACTCTGGGGCAGAATGGGAAGGGCCTGCTGAATCACTGCAGGCCCCCTAAATCCTGGAGTTaGGGCAAAGATGCACTTGCC +
Preference number: 4 (lower is better)
Translates to: PRPTLGQNGKGLLNHCRPPKSWS*GKDALA
Trigger: GGCAAGTGCATCTTTGCCTCAACTCCAGGATTTAGG...GGGCCTGCAGTGATTCAGCAGGCCCTTCCCATTCTGCCCCAGAGTGGGTCTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
CDS-3UTR GCA 90 bp AAGACCCACTCTGGGGCAGAATGGGAAGGGCCTGCTGAATCACTGCAGGCCCTCTTCTCCGACTCTTTCTaGAGGCACTCCGTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: KTHSGAEWEGPAESLQALFSDSF*RHSVFS
Trigger: GGAGAAGACGGAGTGCCTGCAGAAAGAGTCGGAGAA...GAGGGCCTGCAGTGATTCAGCAGGCCCTTCCCATTCTGCCCCAGAGTGGGTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613104.1
ENST00000613954.4
CDS-3UTR GCA 90 bp AGACCCACTCTGGGGCAGAATGGGAAGGGCCTGCTGAATCACTGCAGGCCCTCCGAGTTGAGGCAAAGATaGACTTGCCCTGGTCCAAGA +
Preference number: 4 (lower is better)
Translates to: RPTLGQNGKGLLNHCRPSELRQR*TCPGPR
Trigger: TCTTGGACCAGGGCAAGTGCATCTTTGCCTCAACTC...GGAGGGCCTGCAGTGATTCAGCAGGCCCTTCCCATTCTGCCCCAGAGTGGGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
CDS-3UTR GCA 90 bp CCAAGACCCACTCTGGGGCAGAATGGGAAGGGCCTGCTGAATCACTGCAGGCCCGAGTTGAGGCAAAGATaGACTTGCCCTGGTCCAAGA +
Preference number: 4 (lower is better)
Translates to: PRPTLGQNGKGLLNHCRPELRQR*TCPGPR
Trigger: TCTTGGACCAGGGCAAGTGCATCTTTGCCTCAACTC...GGGCCTGCAGTGATTCAGCAGGCCCTTCCCATTCTGCCCCAGAGTGGGTCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
CDS-3UTR GCA 90 bp AAGACCCACTCTGGGGCAGAATGGGAAGGGCCTGCTGAATCACTGCAGGCCCTCGTGACTTCTCACAGCTaGAAACACCCTGGGCCAGAT +
Preference number: 4 (lower is better)
Translates to: KTHSGAEWEGPAESLQALVTSHS*KHPGPD
Trigger: ATCTGGCCCAGGGTGTTTGCAGCTGTGAGAAGTCAC...GAGGGCCTGCAGTGATTCAGCAGGCCCTTCCCATTCTGCCCCAGAGTGGGTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
CDS-3UTR GCA 90 bp CCAAGACCCACTCTGGGGCAGAATGGGAAGGGCCTGCTGAATCACTGCAGGCCCTGGCTTGGAGAGCGTTaGATCACCCCTTTTATAGCC +
Preference number: 4 (lower is better)
Translates to: PRPTLGQNGKGLLNHCRPWLGER*ITPFIA
Trigger: GGCTATAAAAGGGGTGATGCAACGCTCTCCAAGCCA...GGGCCTGCAGTGATTCAGCAGGCCCTTCCCATTCTGCCCCAGAGTGGGTCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000613954.4
CDS-3UTR GCA 90 bp AATGCTGTTCTCACTCCACATCCCCTACGAGTGACAATGGTAGCCACGGTGAAGCAGTGCGCGCCTGGCTaGGTGCGACTGTGGCTTGGA +
Preference number: 4 (lower is better)
Translates to: NAVLTPHPLRVTMVATVKQCAPG*VRLWLG
Trigger: TCCAAGCCACAGTCGCACGCAGCCAGGCGCGCACTG...CTTCACCGTGGCTACCATTGTCACTCGTAGGGGATGTGGAGTGAGAACAGCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613954.4
CDS-3UTR CCA 90 bp CCAAGACCCACTCTGGGGCAGAATGGGAAGGGCCTGCTGAATCACTGCAGGCCCGGCAGAGACCTGGCCTaGGTGTTGAAGCATCATTTT +
Preference number: 4 (lower is better)
Translates to: PRPTLGQNGKGLLNHCRPGRDLA*VLKHHF
Trigger: AAAATGATGCTTCAACACCCAGGCCAGGTCTCTGCC...GGGCCTGCAGTGATTCAGCAGGCCCTTCCCATTCTGCCCCAGAGTGGGTCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341491.9
ENST00000366987.6
CDS-3UTR CCA 90 bp CCAAGACCCACTCTGGGGCAGAATGGGAAGGGCCTGCTGAATCACTGCAGGCCCCAGAGGTGCTTGTTCTaGATGGCAAACCTCAGCTCT +
Preference number: 4 (lower is better)
Translates to: PRPTLGQNGKGLLNHCRPQRCLF*MANLSS
Trigger: AGAGCTGAGGTTTGCCATCCAGAACAAGCACCTCTG...GGGCCTGCAGTGATTCAGCAGGCCCTTCCCATTCTGCCCCAGAGTGGGTCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
CDS-3UTR CCA 90 bp TCCAAGACCCACTCTGGGGCAGAATGGGAAGGGCCTGCTGAATCACTGCAGGCCCAGCTGGGGGCCATCTaGAACATAAGAATGGCCAGT +
Preference number: 4 (lower is better)
Translates to: SKTHSGAEWEGPAESLQAQLGAI*NIRMAS
Trigger: ACTGGCCATTCTTATGTTCCAGATGGCCCCCAGCTG...GGCCTGCAGTGATTCAGCAGGCCCTTCCCATTCTGCCCCAGAGTGGGTCTTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
CDS-3UTR CCA 90 bp TGGGACACACCGGGGCTCATCAAGCTGCGAGAGGAAGATGGGAGATGGGAGAGCGAGGAAGATGGGAGATaGGAGAGCAGCACTGGGTTT +
Preference number: 4 (lower is better)
Translates to: WDTPGLIKLREEDGRWESEEDGR*ESSTGF
Trigger: AAACCCAGTGCTGCTCTCCCATCTCCCATCTTCCTC...GCTCTCCCATCTCCCATCTTCCTCTCGCAGCTTGATGAGCCCCGGTGTGTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336937.8
ENST00000366983.5
ENST00000464547.5
CDS-3UTR CCA 90 bp TTCTGGAGTCCTCCCATTCTGAGCCCGGACAATACACGTGGGCCGATGAAGGTTATGCAGGGGTGTACCTaGGACACACCGGGGCTCATC +
Preference number: 4 (lower is better)
Translates to: FWSPPILSPDNTRGPMKVMQGCT*DTPGLI
Trigger: GATGAGCCCCGGTGTGTCCCAGGTACACCCCTGCAT...AACCTTCATCGGCCCACGTGTATTGTCCGGGCTCAGAATGGGAGGACTCCAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366983.5
CDS-3UTR TCA 90 bp ATGCAGGGGTGTACCTGGGACACACCGGGGCTCATCAAGCTGCGAGAGGAAGATGCTGCTTCTCGTTCTTaGGCTCCTCAATCTGAGCCT +
Preference number: 4 (lower is better)
Translates to: MQGCTWDTPGLIKLREEDAASRS*APQSEP
Trigger: AGGCTCAGATTGAGGAGCTCAAGAACGAGAAGCAGC...ATCTTCCTCTCGCAGCTTGATGAGCCCCGGTGTGTCCCAGGTACACCCCTGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366983.5
CDS-3UTR TCA 90 bp AATGCTGTTCTCACTCCACATCCCCTACGAGTGACAATGGTAGCCACGGTGAAGATGGGAAGGGCCTGCTaGATCACTGCAGGCCCTCCC +
Preference number: 4 (lower is better)
Translates to: NAVLTPHPLRVTMVATVKMGRAC*ITAGPP
Trigger: GGGAGGGCCTGCAGTGATTCAGCAGGCCCTTCCCAT...CTTCACCGTGGCTACCATTGTCACTCGTAGGGGATGTGGAGTGAGAACAGCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
CDS-3UTR TCA 90 bp AAGACCCACTCTGGGGCAGAATGGGAAGGGCCTGCTGAATCACTGCAGGCCCTCCCTAAATCCTGGAGTTaGGGCAAAGATGCACTTGCC +
Preference number: 4 (lower is better)
Translates to: KTHSGAEWEGPAESLQALPKSWS*GKDALA
Trigger: GGCAAGTGCATCTTTGCCTCAACTCCAGGATTTAGG...GAGGGCCTGCAGTGATTCAGCAGGCCCTTCCCATTCTGCCCCAGAGTGGGTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
CDS-3UTR TCA 90 bp CCAAGACCCACTCTGGGGCAGAATGGGAAGGGCCTGCTGAATCACTGCAGGCCCTTTGGGGCAAGGTGCTaGAAATCCTTAGGAAACAGC +
Preference number: 4 (lower is better)
Translates to: PRPTLGQNGKGLLNHCRPFGARC*KSLGNS
Trigger: GCTGTTTCCTAAGGATTTTCAGCACCTTGCCCCAAA...GGGCCTGCAGTGATTCAGCAGGCCCTTCCCATTCTGCCCCAGAGTGGGTCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366987.6
CDS-3UTR GCA 90 bp GCAGGCCCTCCCGCCTTGATGGTTCTCTGCTGCTGGGATTCTAGAGGTACACAGCCCCCATACCACGACTaGTTAGCTCTGCAATGTTCC +
Preference number: 4 (lower is better)
Translates to: AGPPALMVLCCWDSRGTQPPYHD*LALQCS
Trigger: GGAACATTGCAGAGCTAAGCAGTCGTGGTATGGGGG...CTGTGTACCTCTAGAATCCCAGCAGCAGAGAACCATCAAGGCGGGAGGGCCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613104.1
ENST00000613954.4
CDS-3UTR GCA 90 bp GCAGGCCCTCCCGCCTTGATGGTTCTCTGCTGCTGGGATTCTAGAGGTACACAGCCGAGGTACAGACACTaGTGCCTGAATCCTAACGGT +
Preference number: 4 (lower is better)
Translates to: AGPPALMVLCCWDSRGTQPRYRH*CLNPNG
Trigger: ACCGTTAGGATTCAGGCAGCAGTGTCTGTACCTCGG...CTGTGTACCTCTAGAATCCCAGCAGCAGAGAACCATCAAGGCGGGAGGGCCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
CDS-3UTR CCA 90 bp TCCAAGACCCACTCTGGGGCAGAATGGGAAGGGCCTGCTGAATCACTGCAGGCCGGTGCTTGTTCTGGATaGCAAACCTCAGCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: SKTHSGAEWEGPAESLQAGACSG*QTSALP
Trigger: AGGAAGAGCTGAGGTTTGCCATCCAGAACAAGCACC...GGCCTGCAGTGATTCAGCAGGCCCTTCCCATTCTGCCCCAGAGTGGGTCTTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
CDS-3UTR CCA 90 bp GACACACCGGGGCTCATCAAGCTGCGAGAGGAAGATGGGAGATGGGAGAGCAGCCAGAGGTGCTTGTTCTaGATGGCAAACCTCAGCTCT +
Preference number: 4 (lower is better)
Translates to: DTPGLIKLREEDGRWESSQRCLF*MANLSS
Trigger: AGAGCTGAGGTTTGCCATCCAGAACAAGCACCTCTG...GCTGCTCTCCCATCTCCCATCTTCCTCTCGCAGCTTGATGAGCCCCGGTGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336937.8
ENST00000366983.5
ENST00000464547.5
CDS-3UTR CCA 90 bp AGACCCACTCTGGGGCAGAATGGGAAGGGCCTGCTGAATCACTGCAGGCCCTCCGCTGACAAGCTCTTCTaGCCACCTGAATATCTTGAG +
Preference number: 4 (lower is better)
Translates to: RPTLGQNGKGLLNHCRPSADKLF*PPEYLE
Trigger: CTCAAGATATTCAGGTGGCCAGAAGAGCTTGTCAGC...GGAGGGCCTGCAGTGATTCAGCAGGCCCTTCCCATTCTGCCCCAGAGTGGGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
CDS-3UTR CCA 90 bp TCCAAGACCCACTCTGGGGCAGAATGGGAAGGGCCTGCTGAATCACTGCAGGCCAATAATGCTAAAGCCTaGGTACCACCCAGGCTCCAC +
Preference number: 4 (lower is better)
Translates to: SKTHSGAEWEGPAESLQANNAKA*VPPRLH
Trigger: GTGGAGCCTGGGTGGTACCCAGGCTTTAGCATTATT...GGCCTGCAGTGATTCAGCAGGCCCTTCCCATTCTGCCCCAGAGTGGGTCTTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
CDS-3UTR TCA 90 bp CTTCTGGAGTCCTCCCATTCTGAGCCCGGACAATACACGTGGGCCGATGAAGGTGCTGCTTCTCGTTCTTaGGCTCCTCAATCTGAGCCT +
Preference number: 4 (lower is better)
Translates to: LLESSHSEPGQYTWADEGAASRS*APQSEP
Trigger: AGGCTCAGATTGAGGAGCTCAAGAACGAGAAGCAGC...ACCTTCATCGGCCCACGTGTATTGTCCGGGCTCAGAATGGGAGGACTCCAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366983.5
ENST00000464547.5
CDS-3UTR TCA 90 bp AGACCCACTCTGGGGCAGAATGGGAAGGGCCTGCTGAATCACTGCAGGCCCTCCTGGGCCGATGAAGGTTaGGCATGTATATCAAATGCT +
Preference number: 4 (lower is better)
Translates to: RPTLGQNGKGLLNHCRPSWADEG*ACISNA
Trigger: AGCATTTGATATACATGCTCAACCTTCATCGGCCCA...GGAGGGCCTGCAGTGATTCAGCAGGCCCTTCCCATTCTGCCCCAGAGTGGGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613104.1
ENST00000613954.4
CDS-3UTR TCA 90 bp CCTCCCGCCTTGATGGTTCTCTGCTGCTGGGATTCTAGAGGTACACAGGAAGACTCCTTGTGGCCAGTGTaGGTGACTTCTCACAGCTGC +
Preference number: 4 (lower is better)
Translates to: PPALMVLCCWDSRGTQEDSLWPV*VTSHSC
Trigger: GCAGCTGTGAGAAGTCACTCACACTGGCCACAAGGA...GTCTTCCTGTGTACCTCTAGAATCCCAGCAGCAGAGAACCATCAAGGCGGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
CDS-3UTR GCA 90 bp CCAAGACCCACTCTGGGGCAGAATGGGAAGGGCCTGCTGAATCACTGCAGGCCCTTGATGGTTCTCTGCTaGTGGGATTCTAGAGGTACA +
Preference number: 4 (lower is better)
Translates to: PRPTLGQNGKGLLNHCRPLMVLC*WDSRGT
Trigger: TGTACCTCTAGAATCCCAGCAGCAGAGAACCATCAA...GGGCCTGCAGTGATTCAGCAGGCCCTTCCCATTCTGCCCCAGAGTGGGTCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613104.1
ENST00000613954.4
CDS-3UTR GCA 90 bp CTCTGCTGCTGGGATTCTAGAGGTACACAGGAAGACAGCTCTCCAATGGCTTCAGGCCTGCTGAATCACTaGAGGCCCTCCCGCCTTGAT +
Preference number: 4 (lower is better)
Translates to: LCCWDSRGTQEDSSPMASGLLNH*RPSRLD
Trigger: ATCAAGGCGGGAGGGCCTGCAGTGATTCAGCAGGCC...TGAAGCCATTGGAGAGCTGTCTTCCTGTGTACCTCTAGAATCCCAGCAGCAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613104.1
ENST00000613954.4
CDS-3UTR GCA 90 bp GGGATTCTAGAGGTACACAGGAAGACAGCTCTCCAATGGCTTCAGGGTTTTGGGGGCCTGCTGAATCACTaGAGGCCCTCCCGCCTTGAT +
Preference number: 4 (lower is better)
Translates to: GILEVHRKTALQWLQGFGGLLNH*RPSRLD
Trigger: ATCAAGGCGGGAGGGCCTGCAGTGATTCAGCAGGCC...CCCAAAACCCTGAAGCCATTGGAGAGCTGTCTTCCTGTGTACCTCTAGAATCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613104.1
ENST00000613954.4
CDS-3UTR GCA 90 bp ATCTTCTGGAGTCCTCCCATTCTGAGCCCGGACAATACACGTGGGCCGATGAAGCGGGGCTCATCAAGCTaGGAGAGGAAGATGGGAGAT +
Preference number: 4 (lower is better)
Translates to: IFWSPPILSPDNTRGPMKRGSSS*ERKMGD
Trigger: ATCTCCCATCTTCCTCTCGCAGCTTGATGAGCCCCG...CTTCATCGGCCCACGTGTATTGTCCGGGCTCAGAATGGGAGGACTCCAGAAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366983.5
ENST00000464547.5
CDS-3UTR GCA 90 bp GTGATGCCACAGAGGCGGCCTGTGGCTCTGCTAATACTGAAGCTGCAGTTCAGACGGGGCTCATCAAGCTaGGAGAGGAAGATGGGAGAT +
Preference number: 4 (lower is better)
Translates to: VMPQRRPVALLILKLQFRRGSSS*ERKMGD
Trigger: ATCTCCCATCTTCCTCTCGCAGCTTGATGAGCCCCG...TCTGAACTGCAGCTTCAGTATTAGCAGAGCCACAGGCCGCCTCTGTGGCATCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336937.8
ENST00000366983.5
ENST00000464547.5
CDS-3UTR CCA 90 bp AAAATGCAGACCCTCTTCTTCAGAGAAACCCTGGTGATGCCACAGAGGCGGCCTACAGGCAGGGGACGATaGCAGAAGCACTCACTTCCG +
Preference number: 4 (lower is better)
Translates to: KMQTLFFRETLVMPQRRPTGRGR*QKHSLP
Trigger: CGGAAGTGAGTGCTTCTGCCATCGTCCCCTGCCTGT...AGGCCGCCTCTGTGGCATCACCAGGGTTTCTCTGAAGAAGAGGGTCTGCATTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366983.5
ENST00000464547.5
CDS-3UTR CCA 90 bp AAAATGCAGACCCTCTTCTTCAGAGAAACCCTGGTGATGCCACAGAGGCGGCCTGCAGAGGACATCCGGTaGCAGAGGTGCTTGTTCTGG +
Preference number: 4 (lower is better)
Translates to: KMQTLFFRETLVMPQRRPAEDIR*QRCLFW
Trigger: CCAGAACAAGCACCTCTGCCACCGGATGTCCTCTGC...AGGCCGCCTCTGTGGCATCACCAGGGTTTCTCTGAAGAAGAGGGTCTGCATTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336937.8
ENST00000366983.5
ENST00000464547.5
CDS-3UTR CCA 90 bp CCTCCCGCCTTGATGGTTCTCTGCTGCTGGGATTCTAGAGGTACACAGGAAGACAAGATGCACTTGCCCTaGTCCAAGACCCACTCTGGG +
Preference number: 4 (lower is better)
Translates to: PPALMVLCCWDSRGTQEDKMHLP*SKTHSG
Trigger: CCCAGAGTGGGTCTTGGACCAGGGCAAGTGCATCTT...GTCTTCCTGTGTACCTCTAGAATCCCAGCAGCAGAGAACCATCAAGGCGGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
CDS-3UTR CCA 90 bp GCAGGCCCTCCCGCCTTGATGGTTCTCTGCTGCTGGGATTCTAGAGGTACACAGAATAATGCTAAAGCCTaGGTACCACCCAGGCTCCAC +
Preference number: 4 (lower is better)
Translates to: AGPPALMVLCCWDSRGTQNNAKA*VPPRLH
Trigger: GTGGAGCCTGGGTGGTACCCAGGCTTTAGCATTATT...CTGTGTACCTCTAGAATCCCAGCAGCAGAGAACCATCAAGGCGGGAGGGCCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
CDS-3UTR TCA 90 bp AATGCTGTTCTCACTCCACATCCCCTACGAGTGACAATGGTAGCCACGGTGAAGATCCTCAAACACCAGTaGCCCAGGAGGGGACAGGCA +
Preference number: 4 (lower is better)
Translates to: NAVLTPHPLRVTMVATVKILKHQ*PRRGQA
Trigger: TGCCTGTCCCCTCCTGGGTCACTGGTGTTTGAGGAT...CTTCACCGTGGCTACCATTGTCACTCGTAGGGGATGTGGAGTGAGAACAGCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
CDS-3UTR TCA 90 bp GCAGGCCCTCCCGCCTTGATGGTTCTCTGCTGCTGGGATTCTAGAGGTACACAGATACACGTGGGCCGATaGAGGTTGAGCATGTATATC +
Preference number: 4 (lower is better)
Translates to: AGPPALMVLCCWDSRGTQIHVGR*RLSMYI
Trigger: GATATACATGCTCAACCTTCATCGGCCCACGTGTAT...CTGTGTACCTCTAGAATCCCAGCAGCAGAGAACCATCAAGGCGGGAGGGCCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613104.1
ENST00000613954.4
CDS-3UTR TCA 90 bp CCTCCCGCCTTGATGGTTCTCTGCTGCTGGGATTCTAGAGGTACACAGGAAGACAAAATGAGGATTCAATaGGGACTCCCCAGTCGCCCC +
Preference number: 4 (lower is better)
Translates to: PPALMVLCCWDSRGTQEDKMRIQ*GLPSRP
Trigger: GGGGCGACTGGGGAGTCCTCATTGAATCCTCATTTT...GTCTTCCTGTGTACCTCTAGAATCCCAGCAGCAGAGAACCATCAAGGCGGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613104.1
ENST00000613954.4
CDS-3UTR TCA 90 bp AAGACCCACTCTGGGGCAGAATGGGAAGGGCCTGCTGAATCACTGCAGGCCCTCCACATCAGTGTTGTGTaGCACAAACATCGGAAGAGT +
Preference number: 4 (lower is better)
Translates to: KTHSGAEWEGPAESLQALHISVV*HKHRKS
Trigger: ACTCTTCCGATGTTTGTGTCACACAACACTGATGTG...GAGGGCCTGCAGTGATTCAGCAGGCCCTTCCCATTCTGCCCCAGAGTGGGTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
CDS-3UTR TCA 90 bp AAGACCCACTCTGGGGCAGAATGGGAAGGGCCTGCTGAATCACTGCAGGCCCTCCAAACATCTCTCCACTaGCTGTGGTTTTCAACCACA +
Preference number: 4 (lower is better)
Translates to: KTHSGAEWEGPAESLQALQTSLH*LWFSTT
Trigger: TGTGGTTGAAAACCACAGTCAGTGGAGAGATGTTTG...GAGGGCCTGCAGTGATTCAGCAGGCCCTTCCCATTCTGCCCCAGAGTGGGTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
CDS-3UTR TCA 90 bp AAGACCCACTCTGGGGCAGAATGGGAAGGGCCTGCTGAATCACTGCAGGCCCTCACCTGGCCTGGGTGTTaGAGCATCATTTTGATTTTG +
Preference number: 4 (lower is better)
Translates to: KTHSGAEWEGPAESLQALTWPGC*SIILIL
Trigger: CAAAATCAAAATGATGCTTCAACACCCAGGCCAGGT...GAGGGCCTGCAGTGATTCAGCAGGCCCTTCCCATTCTGCCCCAGAGTGGGTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000366987.6
CDS-3UTR GCA 90 bp AGACCCACTCTGGGGCAGAATGGGAAGGGCCTGCTGAATCACTGCAGGCCCTCCTCGGCACTTTGCAGCTaGAATCTTATTTCTTTCTCG +
Preference number: 4 (lower is better)
Translates to: RPTLGQNGKGLLNHCRPSSALCS*NLISFS
Trigger: CGAGAAAGAAATAAGATTGCAGCTGCAAAGTGCCGA...GGAGGGCCTGCAGTGATTCAGCAGGCCCTTCCCATTCTGCCCCAGAGTGGGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613104.1
ENST00000613954.4
CDS-3UTR GCA 90 bp TCCAAGACCCACTCTGGGGCAGAATGGGAAGGGCCTGCTGAATCACTGCAGGCCTTGATGGTTCTCTGCTaGTGGGATTCTAGAGGTACA +
Preference number: 4 (lower is better)
Translates to: SKTHSGAEWEGPAESLQALMVLC*WDSRGT
Trigger: TGTACCTCTAGAATCCCAGCAGCAGAGAACCATCAA...GGCCTGCAGTGATTCAGCAGGCCCTTCCCATTCTGCCCCAGAGTGGGTCTTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613104.1
ENST00000613954.4
CDS-3UTR GCA 90 bp CCTCCCGCCTTGATGGTTCTCTGCTGCTGGGATTCTAGAGGTACACAGGAAGACAGGCAAAGATGCACTTaGCCTGGTCCAAGACCCACT +
Preference number: 4 (lower is better)
Translates to: PPALMVLCCWDSRGTQEDRQRCT*PGPRPT
Trigger: AGTGGGTCTTGGACCAGGGCAAGTGCATCTTTGCCT...GTCTTCCTGTGTACCTCTAGAATCCCAGCAGCAGAGAACCATCAAGGCGGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
CDS-3UTR GCA 90 bp CCTCCCGCCTTGATGGTTCTCTGCTGCTGGGATTCTAGAGGTACACAGGAAGACAGGTACAGACACTGCTaGCTGAATCCTAACGGTGGG +
Preference number: 4 (lower is better)
Translates to: PPALMVLCCWDSRGTQEDRYRHC*LNPNGG
Trigger: CCCACCGTTAGGATTCAGGCAGCAGTGTCTGTACCT...GTCTTCCTGTGTACCTCTAGAATCCCAGCAGCAGAGAACCATCAAGGCGGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
CDS-3UTR GCA 90 bp AGACCCACTCTGGGGCAGAATGGGAAGGGCCTGCTGAATCACTGCAGGCCCTCCCACAACTTCACTAAATaGTGTTCTCACTCCACATCC +
Preference number: 4 (lower is better)
Translates to: RPTLGQNGKGLLNHCRPSHNFTK*CSHSTS
Trigger: GGATGTGGAGTGAGAACAGCATTTAGTGAAGTTGTG...GGAGGGCCTGCAGTGATTCAGCAGGCCCTTCCCATTCTGCCCCAGAGTGGGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
CDS-3UTR GCA 90 bp GCAGGCCCTCCCGCCTTGATGGTTCTCTGCTGCTGGGATTCTAGAGGTACACAGCACAACCCTGGCCGTTaGACAACTTCACTAAATGCT +
Preference number: 4 (lower is better)
Translates to: AGPPALMVLCCWDSRGTQHNPGR*TTSLNA
Trigger: AGCATTTAGTGAAGTTGTGCAACGGCCAGGGTTGTG...CTGTGTACCTCTAGAATCCCAGCAGCAGAGAACCATCAAGGCGGGAGGGCCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
CDS-3UTR GCA 90 bp GACACACCGGGGCTCATCAAGCTGCGAGAGGAAGATGGGAGATGGGAGAGCAGCCTGGGTTTAGGAAAATaGAGACCCTCTTCTTCAGAG +
Preference number: 4 (lower is better)
Translates to: DTPGLIKLREEDGRWESSLGLGK*RPSSSE
Trigger: CTCTGAAGAAGAGGGTCTGCATTTTCCTAAACCCAG...GCTGCTCTCCCATCTCCCATCTTCCTCTCGCAGCTTGATGAGCCCCGGTGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336937.8
ENST00000366983.5
ENST00000464547.5
CDS-3UTR CCA 90 bp CAGCATTCACACTTTCCAGCTTCTCCGACTCCTGGGACACACCGGGGCTCATCAGGTGCTTGTTCTGGATaGCAAACCTCAGCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: QHSHFPASPTPGTHRGSSGACSG*QTSALP
Trigger: AGGAAGAGCTGAGGTTTGCCATCCAGAACAAGCACC...TGATGAGCCCCGGTGTGTCCCAGGAGTCGGAGAAGCTGGAAAGTGTGAATGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464547.5
CDS-3UTR CCA 90 bp TTCTGGAGTCCTCCCATTCTGAGCCCGGACAATACACGTGGGCCGATGAAGGTTCATATGCAGGTCTTCTaGACCCAAAAGGGCCTTGGG +
Preference number: 4 (lower is better)
Translates to: FWSPPILSPDNTRGPMKVHMQVF*TQKGLG
Trigger: CCCAAGGCCCTTTTGGGTCCAGAAGACCTGCATATG...AACCTTCATCGGCCCACGTGTATTGTCCGGGCTCAGAATGGGAGGACTCCAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366983.5
ENST00000464547.5
CDS-3UTR CCA 90 bp GAGGTACACAGGAAGACAGCTCTCCAATGGCTTCAGGGTTTTGGGTATAAAATGTGTGCAGTGCGCGCCTaGCTGCGTGCGACTGTGGCT +
Preference number: 4 (lower is better)
Translates to: EVHRKTALQWLQGFGYKMCAVRA*LRATVA
Trigger: AGCCACAGTCGCACGCAGCCAGGCGCGCACTGCACA...CATTTTATACCCAAAACCCTGAAGCCATTGGAGAGCTGTCTTCCTGTGTACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613954.4
CDS-3UTR TCA 90 bp GGGATTCTAGAGGTACACAGGAAGACAGCTCTCCAATGGCTTCAGGGTTTTGGGGTCGCTGACAGTGACTaGTTCCAGCGCAGAGGACAT +
Preference number: 4 (lower is better)
Translates to: GILEVHRKTALQWLQGFGVADSD*FQRRGH
Trigger: ATGTCCTCTGCGCTGGAATCAGTCACTGTCAGCGAC...CCCAAAACCCTGAAGCCATTGGAGAGCTGTCTTCCTGTGTACCTCTAGAATCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613104.1
ENST00000613954.4
CDS-3UTR TCA 90 bp CTCCTGGGGGACAAGCAACAGAGGCATCAAGAAAGGAGCCAAGGGCCAGTGAGGTGGGCCGATGAAGGTTaGGCATGTATATCAAATGCT +
Preference number: 4 (lower is better)
Translates to: LLGDKQQRHQERSQGPVRWADEG*ACISNA
Trigger: AGCATTTGATATACATGCTCAACCTTCATCGGCCCA...CCTCACTGGCCCTTGGCTCCTTTCTTGATGCCTCTGTTGCTTGTCCCCCAGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366983.5
CDS-3UTR TCA 90 bp CCAGCTTCTCCGACTCCTGGGGGACAAGCAACAGAGGCATCAAGAAAGGAGCCAATACACGTGGGCCGATaGAGGTTGAGCATGTATATC +
Preference number: 4 (lower is better)
Translates to: PASPTPGGQATEASRKEPIHVGR*RLSMYI
Trigger: GATATACATGCTCAACCTTCATCGGCCCACGTGTAT...TGGCTCCTTTCTTGATGCCTCTGTTGCTTGTCCCCCAGGAGTCGGAGAAGCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366983.5
CDS-3UTR TCA 90 bp TTGATGGTTCTCTGCTGCTGGGATTCTAGAGGTACACAGGAAGACAGCTCTCCAGGAGTCCTCCCATTCTaGGCCCGGACAATACACGTG +
Preference number: 4 (lower is better)
Translates to: LMVLCCWDSRGTQEDSSPGVLPF*ARTIHV
Trigger: CACGTGTATTGTCCGGGCTCAGAATGGGAGGACTCC...TGGAGAGCTGTCTTCCTGTGTACCTCTAGAATCCCAGCAGCAGAGAACCATCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613104.1
ENST00000613954.4
CDS-3UTR TCA 90 bp AGACCCACTCTGGGGCAGAATGGGAAGGGCCTGCTGAATCACTGCAGGCCCTCCGTTTTGGGTATAAAATaGGGATTCAATGAGGACTCC +
Preference number: 4 (lower is better)
Translates to: RPTLGQNGKGLLNHCRPSVLGIK*GFNEDS
Trigger: GGAGTCCTCATTGAATCCTCATTTTATACCCAAAAC...GGAGGGCCTGCAGTGATTCAGCAGGCCCTTCCCATTCTGCCCCAGAGTGGGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613104.1
ENST00000613954.4
CDS-3UTR TCA 90 bp GAGGTACACAGGAAGACAGCTCTCCAATGGCTTCAGGGTTTTGGGTATAAAATGATGGGAAGGGCCTGCTaGATCACTGCAGGCCCTCCC +
Preference number: 4 (lower is better)
Translates to: EVHRKTALQWLQGFGYKMMGRAC*ITAGPP
Trigger: GGGAGGGCCTGCAGTGATTCAGCAGGCCCTTCCCAT...CATTTTATACCCAAAACCCTGAAGCCATTGGAGAGCTGTCTTCCTGTGTACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613104.1
ENST00000613954.4
CDS-3UTR TCA 90 bp AATGCTGTTCTCACTCCACATCCCCTACGAGTGACAATGGTAGCCACGGTGAAGACAGACACTGCTGCCTaGATCCTAACGGTGGGCATC +
Preference number: 4 (lower is better)
Translates to: NAVLTPHPLRVTMVATVKTDTAA*ILTVGI
Trigger: GATGCCCACCGTTAGGATTCAGGCAGCAGTGTCTGT...CTTCACCGTGGCTACCATTGTCACTCGTAGGGGATGTGGAGTGAGAACAGCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
CDS-3UTR TCA 90 bp CTCTGCTGCTGGGATTCTAGAGGTACACAGGAAGACAGCTCTCCAATGGCTTCATCCTTGTGGCCAGTGTaGGTGACTTCTCACAGCTGC +
Preference number: 4 (lower is better)
Translates to: LCCWDSRGTQEDSSPMASSLWPV*VTSHSC
Trigger: GCAGCTGTGAGAAGTCACTCACACTGGCCACAAGGA...TGAAGCCATTGGAGAGCTGTCTTCCTGTGTACCTCTAGAATCCCAGCAGCAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
CDS-3UTR TCA 90 bp ATGCAGGGGTGTACCTGGGACACACCGGGGCTCATCAAGCTGCGAGAGGAAGATGATACCTCATTTGCATaGGTCAACAGCCCATATGCA +
Preference number: 4 (lower is better)
Translates to: MQGCTWDTPGLIKLREEDDTSFA*VNSPYA
Trigger: TGCATATGGGCTGTTGACTCATGCAAATGAGGTATC...ATCTTCCTCTCGCAGCTTGATGAGCCCCGGTGTGTCCCAGGTACACCCCTGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366983.5
CDS-3UTR GCA 90 bp TCCAAGACCCACTCTGGGGCAGAATGGGAAGGGCCTGCTGAATCACTGCAGGCCTCGGCACTTTGCAGCTaGAATCTTATTTCTTTCTCG +
Preference number: 4 (lower is better)
Translates to: SKTHSGAEWEGPAESLQASALCS*NLISFS
Trigger: CGAGAAAGAAATAAGATTGCAGCTGCAAAGTGCCGA...GGCCTGCAGTGATTCAGCAGGCCCTTCCCATTCTGCCCCAGAGTGGGTCTTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613104.1
ENST00000613954.4
CDS-3UTR GCA 90 bp TGGGACACACCGGGGCTCATCAAGCTGCGAGAGGAAGATGGGAGATGGGAGAGCTCGGCACTTTGCAGCTaGAATCTTATTTCTTTCTCG +
Preference number: 4 (lower is better)
Translates to: WDTPGLIKLREEDGRWESSALCS*NLISFS
Trigger: CGAGAAAGAAATAAGATTGCAGCTGCAAAGTGCCGA...GCTCTCCCATCTCCCATCTTCCTCTCGCAGCTTGATGAGCCCCGGTGTGTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336937.8
ENST00000366983.5
ENST00000464547.5
CDS-3UTR GCA 90 bp GCAGGCCCTCCCGCCTTGATGGTTCTCTGCTGCTGGGATTCTAGAGGTACACAGTTGATGGTTCTCTGCTaGTGGGATTCTAGAGGTACA +
Preference number: 4 (lower is better)
Translates to: AGPPALMVLCCWDSRGTQLMVLC*WDSRGT
Trigger: TGTACCTCTAGAATCCCAGCAGCAGAGAACCATCAA...CTGTGTACCTCTAGAATCCCAGCAGCAGAGAACCATCAAGGCGGGAGGGCCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613104.1
ENST00000613954.4
CDS-3UTR GCA 90 bp AGAGCAGCACTGGGTTTAGGAAAATGCAGACCCTCTTCTTCAGAGAAACCCTGGGGCCTTGGGAGTTTCTaGAGGCACTCCGTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: RAALGLGKCRPSSSEKPWGLGSF*RHSVFS
Trigger: GGAGAAGACGGAGTGCCTGCAGAAACTCCCAAGGCC...CCAGGGTTTCTCTGAAGAAGAGGGTCTGCATTTTCCTAAACCCAGTGCTGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336937.8
ENST00000366983.5
ENST00000464547.5
CDS-3UTR CCA 90 bp CCTCCCGCCTTGATGGTTCTCTGCTGCTGGGATTCTAGAGGTACACAGGAAGACGGTGCTTGTTCTGGATaGCAAACCTCAGCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: PPALMVLCCWDSRGTQEDGACSG*QTSALP
Trigger: AGGAAGAGCTGAGGTTTGCCATCCAGAACAAGCACC...GTCTTCCTGTGTACCTCTAGAATCCCAGCAGCAGAGAACCATCAAGGCGGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
CDS-3UTR CCA 90 bp AGAGCAGCACTGGGTTTAGGAAAATGCAGACCCTCTTCTTCAGAGAAACCCTGGGCAGAGGACATCCGGTaGCAGAGGTGCTTGTTCTGG +
Preference number: 4 (lower is better)
Translates to: RAALGLGKCRPSSSEKPWAEDIR*QRCLFW
Trigger: CCAGAACAAGCACCTCTGCCACCGGATGTCCTCTGC...CCAGGGTTTCTCTGAAGAAGAGGGTCTGCATTTTCCTAAACCCAGTGCTGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336937.8
ENST00000366983.5
ENST00000464547.5
CDS-3UTR CCA 90 bp GCAGGCCCTCCCGCCTTGATGGTTCTCTGCTGCTGGGATTCTAGAGGTACACAGCAGCTGCAAACACCCTaGGCCAGATTTCTTAAAACA +
Preference number: 4 (lower is better)
Translates to: AGPPALMVLCCWDSRGTQQLQTP*ARFLKT
Trigger: TGTTTTAAGAAATCTGGCCCAGGGTGTTTGCAGCTG...CTGTGTACCTCTAGAATCCCAGCAGCAGAGAACCATCAAGGCGGGAGGGCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
CDS-3UTR CCA 90 bp AGAGCAGCACTGGGTTTAGGAAAATGCAGACCCTCTTCTTCAGAGAAACCCTGGAGCTTCTCCGACTCCTaGGGGACAAGCAACAGAGGC +
Preference number: 4 (lower is better)
Translates to: RAALGLGKCRPSSSEKPWSFSDS*GTSNRG
Trigger: GCCTCTGTTGCTTGTCCCCCAGGAGTCGGAGAAGCT...CCAGGGTTTCTCTGAAGAAGAGGGTCTGCATTTTCCTAAACCCAGTGCTGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366983.5
CDS-3UTR TCA 90 bp GGGATTCTAGAGGTACACAGGAAGACAGCTCTCCAATGGCTTCAGGGTTTTGGGGCTGCTTCTCGTTCTTaGGCTCCTCAATCTGAGCCT +
Preference number: 4 (lower is better)
Translates to: GILEVHRKTALQWLQGFGAASRS*APQSEP
Trigger: AGGCTCAGATTGAGGAGCTCAAGAACGAGAAGCAGC...CCCAAAACCCTGAAGCCATTGGAGAGCTGTCTTCCTGTGTACCTCTAGAATCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613104.1
ENST00000613954.4
CDS-3UTR TCA 90 bp AATGCTGTTCTCACTCCACATCCCCTACGAGTGACAATGGTAGCCACGGTGAAGGCTGCTTCTCGTTCTTaGGCTCCTCAATCTGAGCCT +
Preference number: 4 (lower is better)
Translates to: NAVLTPHPLRVTMVATVKAASRS*APQSEP
Trigger: AGGCTCAGATTGAGGAGCTCAAGAACGAGAAGCAGC...CTTCACCGTGGCTACCATTGTCACTCGTAGGGGATGTGGAGTGAGAACAGCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
CDS-3UTR TCA 90 bp CCTCCCGCCTTGATGGTTCTCTGCTGCTGGGATTCTAGAGGTACACAGGAAGACATACACGTGGGCCGATaGAGGTTGAGCATGTATATC +
Preference number: 4 (lower is better)
Translates to: PPALMVLCCWDSRGTQEDIHVGR*RLSMYI
Trigger: GATATACATGCTCAACCTTCATCGGCCCACGTGTAT...GTCTTCCTGTGTACCTCTAGAATCCCAGCAGCAGAGAACCATCAAGGCGGGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613104.1
ENST00000613954.4
CDS-3UTR TCA 90 bp GATGGGAGAGCAGCACTGGGTTTAGGAAAATGCAGACCCTCTTCTTCAGAGAAAGGAGTCCTCCCATTCTaGGCCCGGACAATACACGTG +
Preference number: 4 (lower is better)
Translates to: DGRAALGLGKCRPSSSEKGVLPF*ARTIHV
Trigger: CACGTGTATTGTCCGGGCTCAGAATGGGAGGACTCC...TTTCTCTGAAGAAGAGGGTCTGCATTTTCCTAAACCCAGTGCTGCTCTCCCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366983.5
ENST00000464547.5
CDS-3UTR TCA 90 bp TTGATGGTTCTCTGCTGCTGGGATTCTAGAGGTACACAGGAAGACAGCTCTCCAACAGACACTGCTGCCTaGATCCTAACGGTGGGCATC +
Preference number: 4 (lower is better)
Translates to: LMVLCCWDSRGTQEDSSPTDTAA*ILTVGI
Trigger: GATGCCCACCGTTAGGATTCAGGCAGCAGTGTCTGT...TGGAGAGCTGTCTTCCTGTGTACCTCTAGAATCCCAGCAGCAGAGAACCATCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
CDS-3UTR TCA 90 bp GACAATACACGTGGGCCGATGAAGGTTGAGCATGTATATCAAATGCTGCTTCTCTCAGAGAAACCCTGGTaGTGCCACAGAGGCGGCCTG +
Preference number: 4 (lower is better)
Translates to: DNTRGPMKVEHVYQMLLLSEKPW*CHRGGL
Trigger: CAGGCCGCCTCTGTGGCATCACCAGGGTTTCTCTGA...GAGAAGCAGCATTTGATATACATGCTCAACCTTCATCGGCCCACGTGTATTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366983.5
ENST00000464547.5
CDS-3UTR GCA 90 bp ACAACTTCACTAAATGCTGTTCTCACTCCACATCCCCTACGAGTGACAATGGTAGAGAGAAGAGAGCTGTaGAGTGCGCGCCTGGCTGCG +
Preference number: 4 (lower is better)
Translates to: TTSLNAVLTPHPLRVTMVERREL*SARLAA
Trigger: CGCAGCCAGGCGCGCACTGCACAGCTCTCTTCTCTC...TACCATTGTCACTCGTAGGGGATGTGGAGTGAGAACAGCATTTAGTGAAGTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341491.9
ENST00000613954.4
CDS-3UTR GCA 90 bp AATGCTGTTCTCACTCCACATCCCCTACGAGTGACAATGGTAGCCACGGTGAAGATCCGGTGGCAGAGGTaGTTGTTCTGGATGGCAAAC +
Preference number: 4 (lower is better)
Translates to: NAVLTPHPLRVTMVATVKIRWQR*LFWMAN
Trigger: GTTTGCCATCCAGAACAAGCACCTCTGCCACCGGAT...CTTCACCGTGGCTACCATTGTCACTCGTAGGGGATGTGGAGTGAGAACAGCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
CDS-3UTR GCA 90 bp ACACACCGGGGCTCATCAAGCTGCGAGAGGAAGATGGGAGATGGGAGAGCAGCATCGGCACTTTGCAGCTaGAATCTTATTTCTTTCTCG +
Preference number: 4 (lower is better)
Translates to: THRGSSSCERKMGDGRAASALCS*NLISFS
Trigger: CGAGAAAGAAATAAGATTGCAGCTGCAAAGTGCCGA...TGCTGCTCTCCCATCTCCCATCTTCCTCTCGCAGCTTGATGAGCCCCGGTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336937.8
ENST00000366983.5
ENST00000464547.5
CDS-3UTR GCA 90 bp AAGACCCACTCTGGGGCAGAATGGGAAGGGCCTGCTGAATCACTGCAGGCCCTCCTTGTTTCGGCACTTTaGAGCTGCAATCTTATTTCT +
Preference number: 4 (lower is better)
Translates to: KTHSGAEWEGPAESLQALLVSAL*SCNLIS
Trigger: AGAAATAAGATTGCAGCTGCAAAGTGCCGAAACAAG...GAGGGCCTGCAGTGATTCAGCAGGCCCTTCCCATTCTGCCCCAGAGTGGGTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613104.1
ENST00000613954.4
CDS-3UTR GCA 90 bp GGGATTCTAGAGGTACACAGGAAGACAGCTCTCCAATGGCTTCAGGGTTTTGGGTTCTCCGACTCTTTCTaGAGGCACTCCGTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: GILEVHRKTALQWLQGFGFSDSF*RHSVFS
Trigger: GGAGAAGACGGAGTGCCTGCAGAAAGAGTCGGAGAA...CCCAAAACCCTGAAGCCATTGGAGAGCTGTCTTCCTGTGTACCTCTAGAATCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613104.1
ENST00000613954.4
CDS-3UTR GCA 90 bp AAGACCCACTCTGGGGCAGAATGGGAAGGGCCTGCTGAATCACTGCAGGCCCTCAGCATGTATATCAAATaGTGCTTCTCGTTCTTGAGC +
Preference number: 4 (lower is better)
Translates to: KTHSGAEWEGPAESLQALSMYIK*CFSFLS
Trigger: GCTCAAGAACGAGAAGCAGCATTTGATATACATGCT...GAGGGCCTGCAGTGATTCAGCAGGCCCTTCCCATTCTGCCCCAGAGTGGGTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613104.1
ENST00000613954.4
CDS-3UTR GCA 90 bp GGGATTCTAGAGGTACACAGGAAGACAGCTCTCCAATGGCTTCAGGGTTTTGGGAGGTACAGACACTGCTaGCTGAATCCTAACGGTGGG +
Preference number: 4 (lower is better)
Translates to: GILEVHRKTALQWLQGFGRYRHC*LNPNGG
Trigger: CCCACCGTTAGGATTCAGGCAGCAGTGTCTGTACCT...CCCAAAACCCTGAAGCCATTGGAGAGCTGTCTTCCTGTGTACCTCTAGAATCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
CDS-3UTR GCA 90 bp AATGCTGTTCTCACTCCACATCCCCTACGAGTGACAATGGTAGCCACGGTGAAGGTGACTTCTCACAGCTaGAAACACCCTGGGCCAGAT +
Preference number: 4 (lower is better)
Translates to: NAVLTPHPLRVTMVATVKVTSHS*KHPGPD
Trigger: ATCTGGCCCAGGGTGTTTGCAGCTGTGAGAAGTCAC...CTTCACCGTGGCTACCATTGTCACTCGTAGGGGATGTGGAGTGAGAACAGCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
CDS-3UTR GCA 90 bp AGCACTGGGTTTAGGAAAATGCAGACCCTCTTCTTCAGAGAAACCCTGGTGATGGGCCTTGGGAGTTTCTaGAGGCACTCCGTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: STGFRKMQTLFFRETLVMGLGSF*RHSVFS
Trigger: GGAGAAGACGGAGTGCCTGCAGAAACTCCCAAGGCC...CATCACCAGGGTTTCTCTGAAGAAGAGGGTCTGCATTTTCCTAAACCCAGTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336937.8
ENST00000366983.5
ENST00000464547.5
CDS-3UTR CCA 90 bp GAGCCTTCAGTTCAGCATTCACACTTTCCAGCTTCTCCGACTCCTGGGGGACAAGGTGCTTGTTCTGGATaGCAAACCTCAGCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: EPSVQHSHFPASPTPGGQGACSG*QTSALP
Trigger: AGGAAGAGCTGAGGTTTGCCATCCAGAACAAGCACC...TTGTCCCCCAGGAGTCGGAGAAGCTGGAAAGTGTGAATGCTGAACTGAAGGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366983.5
CDS-3UTR CCA 90 bp AGGAAAATGCAGACCCTCTTCTTCAGAGAAACCCTGGTGATGCCACAGAGGCGGCAGAGGTGCTTGTTCTaGATGGCAAACCTCAGCTCT +
Preference number: 4 (lower is better)
Translates to: RKMQTLFFRETLVMPQRRQRCLF*MANLSS
Trigger: AGAGCTGAGGTTTGCCATCCAGAACAAGCACCTCTG...CCGCCTCTGTGGCATCACCAGGGTTTCTCTGAAGAAGAGGGTCTGCATTTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336937.8
ENST00000366983.5
ENST00000464547.5
CDS-3UTR CCA 90 bp GGGCCGATGAAGGTTGAGCATGTATATCAAATGCTGCTTCTCGTTCTTGAGCTCGCAGAGGACATCCGGTaGCAGAGGTGCTTGTTCTGG +
Preference number: 4 (lower is better)
Translates to: GPMKVEHVYQMLLLVLELAEDIR*QRCLFW
Trigger: CCAGAACAAGCACCTCTGCCACCGGATGTCCTCTGC...GAGCTCAAGAACGAGAAGCAGCATTTGATATACATGCTCAACCTTCATCGGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366983.5
ENST00000464547.5
CDS-3UTR CCA 90 bp TTGATGGTTCTCTGCTGCTGGGATTCTAGAGGTACACAGGAAGACAGCTCTCCAAAGATGCACTTGCCCTaGTCCAAGACCCACTCTGGG +
Preference number: 4 (lower is better)
Translates to: LMVLCCWDSRGTQEDSSPKMHLP*SKTHSG
Trigger: CCCAGAGTGGGTCTTGGACCAGGGCAAGTGCATCTT...TGGAGAGCTGTCTTCCTGTGTACCTCTAGAATCCCAGCAGCAGAGAACCATCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
CDS-3UTR CCA 90 bp TCCAAGACCCACTCTGGGGCAGAATGGGAAGGGCCTGCTGAATCACTGCAGGCCAGAGTCCTAACCCTTTaGAAGTTGAACTTTCTGCTT +
Preference number: 4 (lower is better)
Translates to: SKTHSGAEWEGPAESLQARVLTL*KLNFLL
Trigger: AAGCAGAAAGTTCAACTTCCAAAGGGTTAGGACTCT...GGCCTGCAGTGATTCAGCAGGCCCTTCCCATTCTGCCCCAGAGTGGGTCTTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
CDS-3UTR CCA 90 bp AAGACCCACTCTGGGGCAGAATGGGAAGGGCCTGCTGAATCACTGCAGGCCCTCAAATGGAATATTCTTTaGCTCTTCCAGCCTAGACAC +
Preference number: 4 (lower is better)
Translates to: KTHSGAEWEGPAESLQALKWNIL*LFQPRH
Trigger: GTGTCTAGGCTGGAAGAGCCAAAGAATATTCCATTT...GAGGGCCTGCAGTGATTCAGCAGGCCCTTCCCATTCTGCCCCAGAGTGGGTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
CDS-3UTR CCA 90 bp TCCAAGACCCACTCTGGGGCAGAATGGGAAGGGCCTGCTGAATCACTGCAGGCCAAATGGAATATTCTTTaGCTCTTCCAGCCTAGACAC +
Preference number: 4 (lower is better)
Translates to: SKTHSGAEWEGPAESLQAKWNIL*LFQPRH
Trigger: GTGTCTAGGCTGGAAGAGCCAAAGAATATTCCATTT...GGCCTGCAGTGATTCAGCAGGCCCTTCCCATTCTGCCCCAGAGTGGGTCTTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
CDS-3UTR CCA 90 bp CCCATTCTGAGCCCGGACAATACACGTGGGCCGATGAAGGTTGAGCATGTATATCATATGCAGGTCTTCTaGACCCAAAAGGGCCTTGGG +
Preference number: 4 (lower is better)
Translates to: PILSPDNTRGPMKVEHVYHMQVF*TQKGLG
Trigger: CCCAAGGCCCTTTTGGGTCCAGAAGACCTGCATATG...ATATACATGCTCAACCTTCATCGGCCCACGTGTATTGTCCGGGCTCAGAATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366983.5
ENST00000464547.5
CDS-3UTR CCA 90 bp GAGGTACACAGGAAGACAGCTCTCCAATGGCTTCAGGGTTTTGGGTATAAAATGCGTGCGACTGTGGCTTaGAGAGCGTTGCATCACCCC +
Preference number: 4 (lower is better)
Translates to: EVHRKTALQWLQGFGYKMRATVA*RALHHP
Trigger: GGGGTGATGCAACGCTCTCCAAGCCACAGTCGCACG...CATTTTATACCCAAAACCCTGAAGCCATTGGAGAGCTGTCTTCCTGTGTACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613954.4
CDS-3UTR TCA 90 bp GAGGTACACAGGAAGACAGCTCTCCAATGGCTTCAGGGTTTTGGGTATAAAATGATCCTCAAACACCAGTaGCCCAGGAGGGGACAGGCA +
Preference number: 4 (lower is better)
Translates to: EVHRKTALQWLQGFGYKMILKHQ*PRRGQA
Trigger: TGCCTGTCCCCTCCTGGGTCACTGGTGTTTGAGGAT...CATTTTATACCCAAAACCCTGAAGCCATTGGAGAGCTGTCTTCCTGTGTACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
CDS-3UTR TCA 90 bp ACTGGGTTTAGGAAAATGCAGACCCTCTTCTTCAGAGAAACCCTGGTGATGCCAGTCGCTGACAGTGACTaGTTCCAGCGCAGAGGACAT +
Preference number: 4 (lower is better)
Translates to: TGFRKMQTLFFRETLVMPVADSD*FQRRGH
Trigger: ATGTCCTCTGCGCTGGAATCAGTCACTGTCAGCGAC...TGGCATCACCAGGGTTTCTCTGAAGAAGAGGGTCTGCATTTTCCTAAACCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336937.8
ENST00000366983.5
ENST00000464547.5
CDS-3UTR TCA 90 bp CCTCCCGCCTTGATGGTTCTCTGCTGCTGGGATTCTAGAGGTACACAGGAAGACTGGGCCGATGAAGGTTaGGCATGTATATCAAATGCT +
Preference number: 4 (lower is better)
Translates to: PPALMVLCCWDSRGTQEDWADEG*ACISNA
Trigger: AGCATTTGATATACATGCTCAACCTTCATCGGCCCA...GTCTTCCTGTGTACCTCTAGAATCCCAGCAGCAGAGAACCATCAAGGCGGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613104.1
ENST00000613954.4
CDS-3UTR TCA 90 bp AGGAAAATGCAGACCCTCTTCTTCAGAGAAACCCTGGTGATGCCACAGAGGCGGATACACGTGGGCCGATaGAGGTTGAGCATGTATATC +
Preference number: 4 (lower is better)
Translates to: RKMQTLFFRETLVMPQRRIHVGR*RLSMYI
Trigger: GATATACATGCTCAACCTTCATCGGCCCACGTGTAT...CCGCCTCTGTGGCATCACCAGGGTTTCTCTGAAGAAGAGGGTCTGCATTTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366983.5
ENST00000464547.5
CDS-3UTR TCA 90 bp AAAGTCACATCAGTGTTGTGTGACACAAACATCGGAAGAGTACATTGCCTAGTTCAGGCCCTCCCGCCTTaGTGGTTCTCTGCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: KVTSVLCDTNIGRVHCLVQALPP*WFSAAG
Trigger: CCCAGCAGCAGAGAACCATCAAGGCGGGAGGGCCTG...AACTAGGCAATGTACTCTTCCGATGTTTGTGTCACACAACACTGATGTGACTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
CDS-3UTR TCA 90 bp CTAGAGGTACACAGGAAGACAGCTCTCCAATGGCTTCAGGGTTTTGGGTATAAACTGTCCTCCTCTTGCTaGCAAGCTCTTCTGGCCACC +
Preference number: 4 (lower is better)
Translates to: LEVHRKTALQWLQGFGYKLSSSC*QALLAT
Trigger: GGTGGCCAGAAGAGCTTGTCAGCAAGAGGAGGACAG...TTTATACCCAAAACCCTGAAGCCATTGGAGAGCTGTCTTCCTGTGTACCTCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
CDS-3UTR TCA 90 bp ATTCTAGAGGTACACAGGAAGACAGCTCTCCAATGGCTTCAGGGTTTTGGGTATCTGTCCTCCTCTTGCTaGCAAGCTCTTCTGGCCACC +
Preference number: 4 (lower is better)
Translates to: ILEVHRKTALQWLQGFGYLSSSC*QALLAT
Trigger: GGTGGCCAGAAGAGCTTGTCAGCAAGAGGAGGACAG...ATACCCAAAACCCTGAAGCCATTGGAGAGCTGTCTTCCTGTGTACCTCTAGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
CDS-3UTR TCA 90 bp AATGCTGTTCTCACTCCACATCCCCTACGAGTGACAATGGTAGCCACGGTGAAGCCTGACCTAAGACATTaGGTGGAGAGTCCTAACCCT +
Preference number: 4 (lower is better)
Translates to: NAVLTPHPLRVTMVATVKPDLRH*VESPNP
Trigger: AGGGTTAGGACTCTCCACTCAATGTCTTAGGTCAGG...CTTCACCGTGGCTACCATTGTCACTCGTAGGGGATGTGGAGTGAGAACAGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
CDS-3UTR TCA 90 bp CTCTGCTGCTGGGATTCTAGAGGTACACAGGAAGACAGCTCTCCAATGGCTTCACCTGACCTAAGACATTaGGTGGAGAGTCCTAACCCT +
Preference number: 4 (lower is better)
Translates to: LCCWDSRGTQEDSSPMASPDLRH*VESPNP
Trigger: AGGGTTAGGACTCTCCACTCAATGTCTTAGGTCAGG...TGAAGCCATTGGAGAGCTGTCTTCCTGTGTACCTCTAGAATCCCAGCAGCAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
CDS-3UTR GCA 90 bp AGAGCAGCACTGGGTTTAGGAAAATGCAGACCCTCTTCTTCAGAGAAACCCTGGATCCGGTGGCAGAGGTaGTTGTTCTGGATGGCAAAC +
Preference number: 4 (lower is better)
Translates to: RAALGLGKCRPSSSEKPWIRWQR*LFWMAN
Trigger: GTTTGCCATCCAGAACAAGCACCTCTGCCACCGGAT...CCAGGGTTTCTCTGAAGAAGAGGGTCTGCATTTTCCTAAACCCAGTGCTGCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336937.8
ENST00000366983.5
ENST00000464547.5
CDS-3UTR GCA 90 bp TCACTAAATGCTGTTCTCACTCCACATCCCCTACGAGTGACAATGGTAGCCACGTTCTCCGACTCTTTCTaGAGGCACTCCGTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: SLNAVLTPHPLRVTMVATFSDSF*RHSVFS
Trigger: GGAGAAGACGGAGTGCCTGCAGAAAGAGTCGGAGAA...CGTGGCTACCATTGTCACTCGTAGGGGATGTGGAGTGAGAACAGCATTTAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
CDS-3UTR GCA 90 bp TTGATGGTTCTCTGCTGCTGGGATTCTAGAGGTACACAGGAAGACAGCTCTCCACCCCCATACCACGACTaGTTAGCTCTGCAATGTTCC +
Preference number: 4 (lower is better)
Translates to: LMVLCCWDSRGTQEDSSPPPYHD*LALQCS
Trigger: GGAACATTGCAGAGCTAAGCAGTCGTGGTATGGGGG...TGGAGAGCTGTCTTCCTGTGTACCTCTAGAATCCCAGCAGCAGAGAACCATCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613104.1
ENST00000613954.4
CDS-3UTR GCA 90 bp GGGATTCTAGAGGTACACAGGAAGACAGCTCTCCAATGGCTTCAGGGTTTTGGGGAGTTGAGGCAAAGATaGACTTGCCCTGGTCCAAGA +
Preference number: 4 (lower is better)
Translates to: GILEVHRKTALQWLQGFGELRQR*TCPGPR
Trigger: TCTTGGACCAGGGCAAGTGCATCTTTGCCTCAACTC...CCCAAAACCCTGAAGCCATTGGAGAGCTGTCTTCCTGTGTACCTCTAGAATCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
CDS-3UTR GCA 90 bp TTGATGGTTCTCTGCTGCTGGGATTCTAGAGGTACACAGGAAGACAGCTCTCCACCGAGGTACAGACACTaGTGCCTGAATCCTAACGGT +
Preference number: 4 (lower is better)
Translates to: LMVLCCWDSRGTQEDSSPPRYRH*CLNPNG
Trigger: ACCGTTAGGATTCAGGCAGCAGTGTCTGTACCTCGG...TGGAGAGCTGTCTTCCTGTGTACCTCTAGAATCCCAGCAGCAGAGAACCATCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
CDS-3UTR GCA 90 bp AATGCTGTTCTCACTCCACATCCCCTACGAGTGACAATGGTAGCCACGGTGAAGTTGCAACAGAGGACCTaGCATCATACTGCCCATGGA +
Preference number: 4 (lower is better)
Translates to: NAVLTPHPLRVTMVATVKLQQRT*HHTAHG
Trigger: TCCATGGGCAGTATGATGGCAGGTCCTCTGTTGCAA...CTTCACCGTGGCTACCATTGTCACTCGTAGGGGATGTGGAGTGAGAACAGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
CDS-3UTR GCA 90 bp TTTAGGAAAATGCAGACCCTCTTCTTCAGAGAAACCCTGGTGATGCCACAGAGGCGGGGCTCATCAAGCTaGGAGAGGAAGATGGGAGAT +
Preference number: 4 (lower is better)
Translates to: FRKMQTLFFRETLVMPQRRGSSS*ERKMGD
Trigger: ATCTCCCATCTTCCTCTCGCAGCTTGATGAGCCCCG...CCTCTGTGGCATCACCAGGGTTTCTCTGAAGAAGAGGGTCTGCATTTTCCTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336937.8
ENST00000366983.5
ENST00000464547.5
CDS-3UTR CCA 90 bp GGGATTCTAGAGGTACACAGGAAGACAGCTCTCCAATGGCTTCAGGGTTTTGGGGGTGCTTGTTCTGGATaGCAAACCTCAGCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: GILEVHRKTALQWLQGFGGACSG*QTSALP
Trigger: AGGAAGAGCTGAGGTTTGCCATCCAGAACAAGCACC...CCCAAAACCCTGAAGCCATTGGAGAGCTGTCTTCCTGTGTACCTCTAGAATCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
CDS-3UTR CCA 90 bp GGGATTCTAGAGGTACACAGGAAGACAGCTCTCCAATGGCTTCAGGGTTTTGGGCAGAGGTGCTTGTTCTaGATGGCAAACCTCAGCTCT +
Preference number: 4 (lower is better)
Translates to: GILEVHRKTALQWLQGFGQRCLF*MANLSS
Trigger: AGAGCTGAGGTTTGCCATCCAGAACAAGCACCTCTG...CCCAAAACCCTGAAGCCATTGGAGAGCTGTCTTCCTGTGTACCTCTAGAATCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
CDS-3UTR CCA 90 bp GAGGTACACAGGAAGACAGCTCTCCAATGGCTTCAGGGTTTTGGGTATAAAATGGCAGAGGACATCCGGTaGCAGAGGTGCTTGTTCTGG +
Preference number: 4 (lower is better)
Translates to: EVHRKTALQWLQGFGYKMAEDIR*QRCLFW
Trigger: CCAGAACAAGCACCTCTGCCACCGGATGTCCTCTGC...CATTTTATACCCAAAACCCTGAAGCCATTGGAGAGCTGTCTTCCTGTGTACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
CDS-3UTR CCA 90 bp CCAAGACCCACTCTGGGGCAGAATGGGAAGGGCCTGCTGAATCACTGCAGGCCCCCTTCTTTTATCTGTTaGATAAAGAGGTTTCTCTCA +
Preference number: 4 (lower is better)
Translates to: PRPTLGQNGKGLLNHCRPPSFIC*IKRFLS
Trigger: TGAGAGAAACCTCTTTATCCAACAGATAAAAGAAGG...GGGCCTGCAGTGATTCAGCAGGCCCTTCCCATTCTGCCCCAGAGTGGGTCTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613104.1
ENST00000613954.4
CDS-3UTR CCA 90 bp AGACCCACTCTGGGGCAGAATGGGAAGGGCCTGCTGAATCACTGCAGGCCCTCCCCTTCTTTTATCTGTTaGATAAAGAGGTTTCTCTCA +
Preference number: 4 (lower is better)
Translates to: RPTLGQNGKGLLNHCRPSPSFIC*IKRFLS
Trigger: TGAGAGAAACCTCTTTATCCAACAGATAAAAGAAGG...GGAGGGCCTGCAGTGATTCAGCAGGCCCTTCCCATTCTGCCCCAGAGTGGGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613104.1
ENST00000613954.4
CDS-3UTR CCA 90 bp CCTCCCGCCTTGATGGTTCTCTGCTGCTGGGATTCTAGAGGTACACAGGAAGACAAGACAGCTCTCCAATaGCTTCAGGGTTTTGGGTAT +
Preference number: 4 (lower is better)
Translates to: PPALMVLCCWDSRGTQEDKTALQ*LQGFGY
Trigger: ATACCCAAAACCCTGAAGCCATTGGAGAGCTGTCTT...GTCTTCCTGTGTACCTCTAGAATCCCAGCAGCAGAGAACCATCAAGGCGGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613104.1
ENST00000613954.4
CDS-3UTR CCA 90 bp AATGCTGTTCTCACTCCACATCCCCTACGAGTGACAATGGTAGCCACGGTGAAGTCCTCAAGGCATGGTTaGTCAACTGAAGCTAACCCC +
Preference number: 4 (lower is better)
Translates to: NAVLTPHPLRVTMVATVKSSRHG*STEANP
Trigger: GGGGTTAGCTTCAGTTGACCAACCATGCCTTGAGGA...CTTCACCGTGGCTACCATTGTCACTCGTAGGGGATGTGGAGTGAGAACAGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366987.6
CDS-3UTR TCA 90 bp ATTCTAGAGGTACACAGGAAGACAGCTCTCCAATGGCTTCAGGGTTTTGGGTATGTCGCTGACAGTGACTaGTTCCAGCGCAGAGGACAT +
Preference number: 4 (lower is better)
Translates to: ILEVHRKTALQWLQGFGYVADSD*FQRRGH
Trigger: ATGTCCTCTGCGCTGGAATCAGTCACTGTCAGCGAC...ATACCCAAAACCCTGAAGCCATTGGAGAGCTGTCTTCCTGTGTACCTCTAGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613104.1
ENST00000613954.4
CDS-3UTR TCA 90 bp AATGCTGTTCTCACTCCACATCCCCTACGAGTGACAATGGTAGCCACGGTGAAGATACACGTGGGCCGATaGAGGTTGAGCATGTATATC +
Preference number: 4 (lower is better)
Translates to: NAVLTPHPLRVTMVATVKIHVGR*RLSMYI
Trigger: GATATACATGCTCAACCTTCATCGGCCCACGTGTAT...CTTCACCGTGGCTACCATTGTCACTCGTAGGGGATGTGGAGTGAGAACAGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
CDS-3UTR TCA 90 bp ACAACTTCACTAAATGCTGTTCTCACTCCACATCCCCTACGAGTGACAATGGTAGGAGTCCTCCCATTCTaGGCCCGGACAATACACGTG +
Preference number: 4 (lower is better)
Translates to: TTSLNAVLTPHPLRVTMVGVLPF*ARTIHV
Trigger: CACGTGTATTGTCCGGGCTCAGAATGGGAGGACTCC...TACCATTGTCACTCGTAGGGGATGTGGAGTGAGAACAGCATTTAGTGAAGTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
CDS-3UTR TCA 90 bp GGGATTCTAGAGGTACACAGGAAGACAGCTCTCCAATGGCTTCAGGGTTTTGGGCCTAGACACAACTCCTaGCCTAAGACATTGAGTGGA +
Preference number: 4 (lower is better)
Translates to: GILEVHRKTALQWLQGFGPRHNS*PKTLSG
Trigger: TCCACTCAATGTCTTAGGTCAGGAGTTGTGTCTAGG...CCCAAAACCCTGAAGCCATTGGAGAGCTGTCTTCCTGTGTACCTCTAGAATCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
CDS-3UTR TCA 90 bp AGGAAAATGCAGACCCTCTTCTTCAGAGAAACCCTGGTGATGCCACAGAGGCGGGATACCTCATTTGCATaGGTCAACAGCCCATATGCA +
Preference number: 4 (lower is better)
Translates to: RKMQTLFFRETLVMPQRRDTSFA*VNSPYA
Trigger: TGCATATGGGCTGTTGACTCATGCAAATGAGGTATC...CCGCCTCTGTGGCATCACCAGGGTTTCTCTGAAGAAGAGGGTCTGCATTTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336937.8
ENST00000366983.5
ENST00000464547.5
CDS-3UTR GCA 90 bp AAAGTCACATCAGTGTTGTGTGACACAAACATCGGAAGAGTACATTGCCTAGTTGAGAGAAGAGAGCTGTaGAGTGCGCGCCTGGCTGCG +
Preference number: 4 (lower is better)
Translates to: KVTSVLCDTNIGRVHCLVERREL*SARLAA
Trigger: CGCAGCCAGGCGCGCACTGCACAGCTCTCTTCTCTC...AACTAGGCAATGTACTCTTCCGATGTTTGTGTCACACAACACTGATGTGACTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341491.9
ENST00000613954.4
CDS-3UTR GCA 90 bp CAGCATTCACACTTTCCAGCTTCTCCGACTCCTGGGACACACCGGGGCTCATCACTTGTTTCGGCACTTTaGAGCTGCAATCTTATTTCT +
Preference number: 4 (lower is better)
Translates to: QHSHFPASPTPGTHRGSSLVSAL*SCNLIS
Trigger: AGAAATAAGATTGCAGCTGCAAAGTGCCGAAACAAG...TGATGAGCCCCGGTGTGTCCCAGGAGTCGGAGAAGCTGGAAAGTGTGAATGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464547.5
CDS-3UTR GCA 90 bp TCACTAAATGCTGTTCTCACTCCACATCCCCTACGAGTGACAATGGTAGCCACGTTGCAACAGAGGACCTaGCATCATACTGCCCATGGA +
Preference number: 4 (lower is better)
Translates to: SLNAVLTPHPLRVTMVATLQQRT*HHTAHG
Trigger: TCCATGGGCAGTATGATGGCAGGTCCTCTGTTGCAA...CGTGGCTACCATTGTCACTCGTAGGGGATGTGGAGTGAGAACAGCATTTAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
CDS-3UTR GCA 90 bp TTGATGGTTCTCTGCTGCTGGGATTCTAGAGGTACACAGGAAGACAGCTCTCCATTGCAACAGAGGACCTaGCATCATACTGCCCATGGA +
Preference number: 4 (lower is better)
Translates to: LMVLCCWDSRGTQEDSSPLQQRT*HHTAHG
Trigger: TCCATGGGCAGTATGATGGCAGGTCCTCTGTTGCAA...TGGAGAGCTGTCTTCCTGTGTACCTCTAGAATCCCAGCAGCAGAGAACCATCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
CDS-3UTR GCA 90 bp ACAACTTCACTAAATGCTGTTCTCACTCCACATCCCCTACGAGTGACAATGGTACAGAAGCACTCATTTTaGTCCAGGCTCCGCTCGGGG +
Preference number: 4 (lower is better)
Translates to: TTSLNAVLTPHPLRVTMVQKHSF*SRLRSG
Trigger: CCCCGAGCGGAGCCTGGAGCAAAATGAGTGCTTCTG...TACCATTGTCACTCGTAGGGGATGTGGAGTGAGAACAGCATTTAGTGAAGTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613954.4
CDS-3UTR CCA 90 bp AGAGCAGCACTGGGTTTAGGAAAATGCAGACCCTCTTCTTCAGAGAAACCCTGGCAGAGGTGCTTGTTCTaGATGGCAAACCTCAGCTCT +
Preference number: 4 (lower is better)
Translates to: RAALGLGKCRPSSSEKPWQRCLF*MANLSS
Trigger: AGAGCTGAGGTTTGCCATCCAGAACAAGCACCTCTG...CCAGGGTTTCTCTGAAGAAGAGGGTCTGCATTTTCCTAAACCCAGTGCTGCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336937.8
ENST00000366983.5
ENST00000464547.5
CDS-3UTR CCA 90 bp GGGATTCTAGAGGTACACAGGAAGACAGCTCTCCAATGGCTTCAGGGTTTTGGGATGGTTCTCTGCTGCTaGGATTCTAGAGGTACACAG +
Preference number: 4 (lower is better)
Translates to: GILEVHRKTALQWLQGFGMVLCC*DSRGTQ
Trigger: CTGTGTACCTCTAGAATCCCAGCAGCAGAGAACCAT...CCCAAAACCCTGAAGCCATTGGAGAGCTGTCTTCCTGTGTACCTCTAGAATCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613104.1
ENST00000613954.4
CDS-3UTR CCA 90 bp AATGCTGTTCTCACTCCACATCCCCTACGAGTGACAATGGTAGCCACGGTGAAGGCTGACAAGCTCTTCTaGCCACCTGAATATCTTGAG +
Preference number: 4 (lower is better)
Translates to: NAVLTPHPLRVTMVATVKADKLF*PPEYLE
Trigger: CTCAAGATATTCAGGTGGCCAGAAGAGCTTGTCAGC...CTTCACCGTGGCTACCATTGTCACTCGTAGGGGATGTGGAGTGAGAACAGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
CDS-3UTR CCA 90 bp TTGATGGTTCTCTGCTGCTGGGATTCTAGAGGTACACAGGAAGACAGCTCTCCAAATAATGCTAAAGCCTaGGTACCACCCAGGCTCCAC +
Preference number: 4 (lower is better)
Translates to: LMVLCCWDSRGTQEDSSPNNAKA*VPPRLH
Trigger: GTGGAGCCTGGGTGGTACCCAGGCTTTAGCATTATT...TGGAGAGCTGTCTTCCTGTGTACCTCTAGAATCCCAGCAGCAGAGAACCATCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
CDS-3UTR CCA 90 bp TTTAGGAAAATGCAGACCCTCTTCTTCAGAGAAACCCTGGTGATGCCACAGAGGCATATGCAGGTCTTCTaGACCCAAAAGGGCCTTGGG +
Preference number: 4 (lower is better)
Translates to: FRKMQTLFFRETLVMPQRHMQVF*TQKGLG
Trigger: CCCAAGGCCCTTTTGGGTCCAGAAGACCTGCATATG...CCTCTGTGGCATCACCAGGGTTTCTCTGAAGAAGAGGGTCTGCATTTTCCTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336937.8
ENST00000366983.5
ENST00000464547.5
CDS-3UTR TCA 90 bp ATTCTAGAGGTACACAGGAAGACAGCTCTCCAATGGCTTCAGGGTTTTGGGTATGCTGCTTCTCGTTCTTaGGCTCCTCAATCTGAGCCT +
Preference number: 4 (lower is better)
Translates to: ILEVHRKTALQWLQGFGYAASRS*APQSEP
Trigger: AGGCTCAGATTGAGGAGCTCAAGAACGAGAAGCAGC...ATACCCAAAACCCTGAAGCCATTGGAGAGCTGTCTTCCTGTGTACCTCTAGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613104.1
ENST00000613954.4
CDS-3UTR TCA 90 bp CCCATTCTGAGCCCGGACAATACACGTGGGCCGATGAAGGTTGAGCATGTATATTGGGCCGATGAAGGTTaGGCATGTATATCAAATGCT +
Preference number: 4 (lower is better)
Translates to: PILSPDNTRGPMKVEHVYWADEG*ACISNA
Trigger: AGCATTTGATATACATGCTCAACCTTCATCGGCCCA...ATATACATGCTCAACCTTCATCGGCCCACGTGTATTGTCCGGGCTCAGAATGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366983.5
ENST00000464547.5
CDS-3UTR TCA 90 bp CTCTGCTGCTGGGATTCTAGAGGTACACAGGAAGACAGCTCTCCAATGGCTTCATGGGCCGATGAAGGTTaGGCATGTATATCAAATGCT +
Preference number: 4 (lower is better)
Translates to: LCCWDSRGTQEDSSPMASWADEG*ACISNA
Trigger: AGCATTTGATATACATGCTCAACCTTCATCGGCCCA...TGAAGCCATTGGAGAGCTGTCTTCCTGTGTACCTCTAGAATCCCAGCAGCAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613104.1
ENST00000613954.4
CDS-3UTR TCA 90 bp CTAGAGGTACACAGGAAGACAGCTCTCCAATGGCTTCAGGGTTTTGGGTATAAAAAAATGAGGATTCAATaGGGACTCCCCAGTCGCCCC +
Preference number: 4 (lower is better)
Translates to: LEVHRKTALQWLQGFGYKKMRIQ*GLPSRP
Trigger: GGGGCGACTGGGGAGTCCTCATTGAATCCTCATTTT...TTTATACCCAAAACCCTGAAGCCATTGGAGAGCTGTCTTCCTGTGTACCTCTAG
49% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613104.1
ENST00000613954.4
CDS-3UTR TCA 90 bp GAGGTACACAGGAAGACAGCTCTCCAATGGCTTCAGGGTTTTGGGTATAAAATGAAAATGAGGATTCAATaGGGACTCCCCAGTCGCCCC +
Preference number: 4 (lower is better)
Translates to: EVHRKTALQWLQGFGYKMKMRIQ*GLPSRP
Trigger: GGGGCGACTGGGGAGTCCTCATTGAATCCTCATTTT...CATTTTATACCCAAAACCCTGAAGCCATTGGAGAGCTGTCTTCCTGTGTACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613104.1
ENST00000613954.4
CDS-3UTR TCA 90 bp CCTCCCGCCTTGATGGTTCTCTGCTGCTGGGATTCTAGAGGTACACAGGAAGACGTTTTGGGTATAAAATaGGGATTCAATGAGGACTCC +
Preference number: 4 (lower is better)
Translates to: PPALMVLCCWDSRGTQEDVLGIK*GFNEDS
Trigger: GGAGTCCTCATTGAATCCTCATTTTATACCCAAAAC...GTCTTCCTGTGTACCTCTAGAATCCCAGCAGCAGAGAACCATCAAGGCGGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613104.1
ENST00000613954.4
CDS-3UTR TCA 90 bp CTCTGCTGCTGGGATTCTAGAGGTACACAGGAAGACAGCTCTCCAATGGCTTCACACATCAGTGTTGTGTaGCACAAACATCGGAAGAGT +
Preference number: 4 (lower is better)
Translates to: LCCWDSRGTQEDSSPMASHISVV*HKHRKS
Trigger: ACTCTTCCGATGTTTGTGTCACACAACACTGATGTG...TGAAGCCATTGGAGAGCTGTCTTCCTGTGTACCTCTAGAATCCCAGCAGCAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
CDS-3UTR TCA 90 bp ACAACTTCACTAAATGCTGTTCTCACTCCACATCCCCTACGAGTGACAATGGTACCACCCAGGCTCCACTaGCTGTGGTTTCCAAACATC +
Preference number: 4 (lower is better)
Translates to: TTSLNAVLTPHPLRVTMVPPRLH*LWFPNI
Trigger: GATGTTTGGAAACCACAGTCAGTGGAGCCTGGGTGG...TACCATTGTCACTCGTAGGGGATGTGGAGTGAGAACAGCATTTAGTGAAGTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
CDS-3UTR TCA 90 bp CAATCTGAGCCTTCAGTTCAGCATTCACACTTTCCAGCTTCTCCGACTCCTGGGGATACCTCATTTGCATaGGTCAACAGCCCATATGCA +
Preference number: 4 (lower is better)
Translates to: QSEPSVQHSHFPASPTPGDTSFA*VNSPYA
Trigger: TGCATATGGGCTGTTGACTCATGCAAATGAGGTATC...CCCAGGAGTCGGAGAAGCTGGAAAGTGTGAATGCTGAACTGAAGGCTCAGATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366983.5
ENST00000464547.5
CDS-3UTR GCA 90 bp GAGGTACACAGGAAGACAGCTCTCCAATGGCTTCAGGGTTTTGGGTATAAAATGAGGTACAGACACTGCTaGCTGAATCCTAACGGTGGG +
Preference number: 4 (lower is better)
Translates to: EVHRKTALQWLQGFGYKMRYRHC*LNPNGG
Trigger: CCCACCGTTAGGATTCAGGCAGCAGTGTCTGTACCT...CATTTTATACCCAAAACCCTGAAGCCATTGGAGAGCTGTCTTCCTGTGTACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
CDS-3UTR GCA 90 bp AGCTTCTCCGACTCCTGGGGGACAAGCAACAGAGGCATCAAGAAAGGAGCCAAGTTCAGATACCTCATTTaGATGAGTCAACAGCCCATA +
Preference number: 4 (lower is better)
Translates to: SFSDSWGTSNRGIKKGAKFRYLI*MSQQPI
Trigger: TATGGGCTGTTGACTCATGCAAATGAGGTATCTGAA...CTTGGCTCCTTTCTTGATGCCTCTGTTGCTTGTCCCCCAGGAGTCGGAGAAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366983.5
CDS-3UTR CCA 90 bp TTGATGGTTCTCTGCTGCTGGGATTCTAGAGGTACACAGGAAGACAGCTCTCCAATGGTTCTCTGCTGCTaGGATTCTAGAGGTACACAG +
Preference number: 4 (lower is better)
Translates to: LMVLCCWDSRGTQEDSSPMVLCC*DSRGTQ
Trigger: CTGTGTACCTCTAGAATCCCAGCAGCAGAGAACCAT...TGGAGAGCTGTCTTCCTGTGTACCTCTAGAATCCCAGCAGCAGAGAACCATCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613104.1
ENST00000613954.4
CDS-3UTR CCA 90 bp ATTCTAGAGGTACACAGGAAGACAGCTCTCCAATGGCTTCAGGGTTTTGGGTATCAGCTGGGGGCCATCTaGAACATAAGAATGGCCAGT +
Preference number: 4 (lower is better)
Translates to: ILEVHRKTALQWLQGFGYQLGAI*NIRMAS
Trigger: ACTGGCCATTCTTATGTTCCAGATGGCCCCCAGCTG...ATACCCAAAACCCTGAAGCCATTGGAGAGCTGTCTTCCTGTGTACCTCTAGAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
CDS-3UTR CCA 90 bp CTAGAGGTACACAGGAAGACAGCTCTCCAATGGCTTCAGGGTTTTGGGTATAAACAGCTGGGGGCCATCTaGAACATAAGAATGGCCAGT +
Preference number: 4 (lower is better)
Translates to: LEVHRKTALQWLQGFGYKQLGAI*NIRMAS
Trigger: ACTGGCCATTCTTATGTTCCAGATGGCCCCCAGCTG...TTTATACCCAAAACCCTGAAGCCATTGGAGAGCTGTCTTCCTGTGTACCTCTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
CDS-3UTR CCA 90 bp AATGCTGTTCTCACTCCACATCCCCTACGAGTGACAATGGTAGCCACGGTGAAGCAGCTGCAAACACCCTaGGCCAGATTTCTTAAAACA +
Preference number: 4 (lower is better)
Translates to: NAVLTPHPLRVTMVATVKQLQTP*ARFLKT
Trigger: TGTTTTAAGAAATCTGGCCCAGGGTGTTTGCAGCTG...CTTCACCGTGGCTACCATTGTCACTCGTAGGGGATGTGGAGTGAGAACAGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
CDS-3UTR TCA 90 bp AAAGTCACATCAGTGTTGTGTGACACAAACATCGGAAGAGTACATTGCCTAGTTGGAGTCCTCCCATTCTaGGCCCGGACAATACACGTG +
Preference number: 4 (lower is better)
Translates to: KVTSVLCDTNIGRVHCLVGVLPF*ARTIHV
Trigger: CACGTGTATTGTCCGGGCTCAGAATGGGAGGACTCC...AACTAGGCAATGTACTCTTCCGATGTTTGTGTCACACAACACTGATGTGACTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
CDS-3UTR TCA 90 bp TTGATGGTTCTCTGCTGCTGGGATTCTAGAGGTACACAGGAAGACAGCTCTCCACACATCAGTGTTGTGTaGCACAAACATCGGAAGAGT +
Preference number: 4 (lower is better)
Translates to: LMVLCCWDSRGTQEDSSPHISVV*HKHRKS
Trigger: ACTCTTCCGATGTTTGTGTCACACAACACTGATGTG...TGGAGAGCTGTCTTCCTGTGTACCTCTAGAATCCCAGCAGCAGAGAACCATCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
CDS-3UTR TCA 90 bp ATTCTAGAGGTACACAGGAAGACAGCTCTCCAATGGCTTCAGGGTTTTGGGTATCCTGACCTAAGACATTaGGTGGAGAGTCCTAACCCT +
Preference number: 4 (lower is better)
Translates to: ILEVHRKTALQWLQGFGYPDLRH*VESPNP
Trigger: AGGGTTAGGACTCTCCACTCAATGTCTTAGGTCAGG...ATACCCAAAACCCTGAAGCCATTGGAGAGCTGTCTTCCTGTGTACCTCTAGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
CDS-3UTR GCA 90 bp AGGAAAATGCAGACCCTCTTCTTCAGAGAAACCCTGGTGATGCCACAGAGGCGGCTTGTTTCGGCACTTTaGAGCTGCAATCTTATTTCT +
Preference number: 4 (lower is better)
Translates to: RKMQTLFFRETLVMPQRRLVSAL*SCNLIS
Trigger: AGAAATAAGATTGCAGCTGCAAAGTGCCGAAACAAG...CCGCCTCTGTGGCATCACCAGGGTTTCTCTGAAGAAGAGGGTCTGCATTTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336937.8
ENST00000366983.5
ENST00000464547.5
CDS-3UTR GCA 90 bp AAAATGCAGACCCTCTTCTTCAGAGAAACCCTGGTGATGCCACAGAGGCGGCCTAGCATGTATATCAAATaGTGCTTCTCGTTCTTGAGC +
Preference number: 4 (lower is better)
Translates to: KMQTLFFRETLVMPQRRPSMYIK*CFSFLS
Trigger: GCTCAAGAACGAGAAGCAGCATTTGATATACATGCT...AGGCCGCCTCTGTGGCATCACCAGGGTTTCTCTGAAGAAGAGGGTCTGCATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366983.5
ENST00000464547.5
CDS-3UTR GCA 90 bp TTGATGGTTCTCTGCTGCTGGGATTCTAGAGGTACACAGGAAGACAGCTCTCCATTGATGGTTCTCTGCTaGTGGGATTCTAGAGGTACA +
Preference number: 4 (lower is better)
Translates to: LMVLCCWDSRGTQEDSSPLMVLC*WDSRGT
Trigger: TGTACCTCTAGAATCCCAGCAGCAGAGAACCATCAA...TGGAGAGCTGTCTTCCTGTGTACCTCTAGAATCCCAGCAGCAGAGAACCATCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613104.1
ENST00000613954.4
CDS-3UTR CCA 90 bp CTAGAGGTACACAGGAAGACAGCTCTCCAATGGCTTCAGGGTTTTGGGTATAAAGGCAGAGACCTGGCCTaGGTGTTGAAGCATCATTTT +
Preference number: 4 (lower is better)
Translates to: LEVHRKTALQWLQGFGYKGRDLA*VLKHHF
Trigger: AAAATGATGCTTCAACACCCAGGCCAGGTCTCTGCC...TTTATACCCAAAACCCTGAAGCCATTGGAGAGCTGTCTTCCTGTGTACCTCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341491.9
ENST00000366987.6
CDS-3UTR CCA 90 bp CTAGAGGTACACAGGAAGACAGCTCTCCAATGGCTTCAGGGTTTTGGGTATAAACAGAGGTGCTTGTTCTaGATGGCAAACCTCAGCTCT +
Preference number: 4 (lower is better)
Translates to: LEVHRKTALQWLQGFGYKQRCLF*MANLSS
Trigger: AGAGCTGAGGTTTGCCATCCAGAACAAGCACCTCTG...TTTATACCCAAAACCCTGAAGCCATTGGAGAGCTGTCTTCCTGTGTACCTCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
CDS-3UTR CCA 90 bp AAAGTCACATCAGTGTTGTGTGACACAAACATCGGAAGAGTACATTGCCTAGTTGCAGAGGACATCCGGTaGCAGAGGTGCTTGTTCTGG +
Preference number: 4 (lower is better)
Translates to: KVTSVLCDTNIGRVHCLVAEDIR*QRCLFW
Trigger: CCAGAACAAGCACCTCTGCCACCGGATGTCCTCTGC...AACTAGGCAATGTACTCTTCCGATGTTTGTGTCACACAACACTGATGTGACTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
CDS-3UTR CCA 90 bp TTGATGGTTCTCTGCTGCTGGGATTCTAGAGGTACACAGGAAGACAGCTCTCCAAAGACAGCTCTCCAATaGCTTCAGGGTTTTGGGTAT +
Preference number: 4 (lower is better)
Translates to: LMVLCCWDSRGTQEDSSPKTALQ*LQGFGY
Trigger: ATACCCAAAACCCTGAAGCCATTGGAGAGCTGTCTT...TGGAGAGCTGTCTTCCTGTGTACCTCTAGAATCCCAGCAGCAGAGAACCATCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613104.1
ENST00000613954.4
CDS-3UTR CCA 90 bp TCACTAAATGCTGTTCTCACTCCACATCCCCTACGAGTGACAATGGTAGCCACGCAGCTGCAAACACCCTaGGCCAGATTTCTTAAAACA +
Preference number: 4 (lower is better)
Translates to: SLNAVLTPHPLRVTMVATQLQTP*ARFLKT
Trigger: TGTTTTAAGAAATCTGGCCCAGGGTGTTTGCAGCTG...CGTGGCTACCATTGTCACTCGTAGGGGATGTGGAGTGAGAACAGCATTTAGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
CDS-3UTR CCA 90 bp TTTAGGAAAATGCAGACCCTCTTCTTCAGAGAAACCCTGGTGATGCCACAGAGGGGTGCTTGTTCTGGATaGCAAACCTCAGCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: FRKMQTLFFRETLVMPQRGACSG*QTSALL
Trigger: AAGAAGAGCTGAGGTTTGCCATCCAGAACAAGCACC...CCTCTGTGGCATCACCAGGGTTTCTCTGAAGAAGAGGGTCTGCATTTTCCTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336937.8
CDS-3UTR CCA 90 bp ACAACTTCACTAAATGCTGTTCTCACTCCACATCCCCTACGAGTGACAATGGTAACAGGCAGGGGACGATaGCAGAAGCACTCATTTTGC +
Preference number: 4 (lower is better)
Translates to: TTSLNAVLTPHPLRVTMVTGRGR*QKHSFC
Trigger: GCAAAATGAGTGCTTCTGCCATCGTCCCCTGCCTGT...TACCATTGTCACTCGTAGGGGATGTGGAGTGAGAACAGCATTTAGTGAAGTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000613954.4
CDS-3UTR TCA 90 bp ATTCTAGAGGTACACAGGAAGACAGCTCTCCAATGGCTTCAGGGTTTTGGGTATCCTAGACACAACTCCTaGCCTAAGACATTGAGTGGA +
Preference number: 4 (lower is better)
Translates to: ILEVHRKTALQWLQGFGYPRHNS*PKTLSG
Trigger: TCCACTCAATGTCTTAGGTCAGGAGTTGTGTCTAGG...ATACCCAAAACCCTGAAGCCATTGGAGAGCTGTCTTCCTGTGTACCTCTAGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
CDS-3UTR TCA 90 bp TCACTAAATGCTGTTCTCACTCCACATCCCCTACGAGTGACAATGGTAGCCACGTCACATCTTCCCATCTaGTCCCATCCAATTTATCCT +
Preference number: 4 (lower is better)
Translates to: SLNAVLTPHPLRVTMVATSHLPI*SHPIYP
Trigger: AGGATAAATTGGATGGGATCAGATGGGAAGATGTGA...CGTGGCTACCATTGTCACTCGTAGGGGATGTGGAGTGAGAACAGCATTTAGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366987.6
CDS-3UTR TCA 90 bp CTAGAGGTACACAGGAAGACAGCTCTCCAATGGCTTCAGGGTTTTGGGTATAAATTGCCAGTCCCAGGCTaGCGTAATGCTATTAATAGC +
Preference number: 4 (lower is better)
Translates to: LEVHRKTALQWLQGFGYKLPVPG*RNAINS
Trigger: GCTATTAATAGCATTACGTCAGCCTGGGACTGGCAA...TTTATACCCAAAACCCTGAAGCCATTGGAGAGCTGTCTTCCTGTGTACCTCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613954.4
CDS-3UTR GCA 90 bp CAATCTGAGCCTTCAGTTCAGCATTCACACTTTCCAGCTTCTCCGACTCCTGGGCTTGTTTCGGCACTTTaGAGCTGCAATCTTATTTCT +
Preference number: 4 (lower is better)
Translates to: QSEPSVQHSHFPASPTPGLVSAL*SCNLIS
Trigger: AGAAATAAGATTGCAGCTGCAAAGTGCCGAAACAAG...CCCAGGAGTCGGAGAAGCTGGAAAGTGTGAATGCTGAACTGAAGGCTCAGATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366983.5
ENST00000464547.5
CDS-3UTR GCA 90 bp CTCTGCTGCTGGGATTCTAGAGGTACACAGGAAGACAGCTCTCCAATGGCTTCACTTGTTTCGGCACTTTaGAGCTGCAATCTTATTTCT +
Preference number: 4 (lower is better)
Translates to: LCCWDSRGTQEDSSPMASLVSAL*SCNLIS
Trigger: AGAAATAAGATTGCAGCTGCAAAGTGCCGAAACAAG...TGAAGCCATTGGAGAGCTGTCTTCCTGTGTACCTCTAGAATCCCAGCAGCAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613104.1
ENST00000613954.4
CDS-3UTR GCA 90 bp GGGATTCTAGAGGTACACAGGAAGACAGCTCTCCAATGGCTTCAGGGTTTTGGGAGCATGTATATCAAATaGTGCTTCTCGTTCTTGAGC +
Preference number: 4 (lower is better)
Translates to: GILEVHRKTALQWLQGFGSMYIK*CFSFLS
Trigger: GCTCAAGAACGAGAAGCAGCATTTGATATACATGCT...CCCAAAACCCTGAAGCCATTGGAGAGCTGTCTTCCTGTGTACCTCTAGAATCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613104.1
ENST00000613954.4
CDS-3UTR GCA 90 bp ATTCTAGAGGTACACAGGAAGACAGCTCTCCAATGGCTTCAGGGTTTTGGGTATCACAACCCTGGCCGTTaGACAACTTCACTAAATGCT +
Preference number: 4 (lower is better)
Translates to: ILEVHRKTALQWLQGFGYHNPGR*TTSLNA
Trigger: AGCATTTAGTGAAGTTGTGCAACGGCCAGGGTTGTG...ATACCCAAAACCCTGAAGCCATTGGAGAGCTGTCTTCCTGTGTACCTCTAGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
CDS-3UTR GCA 90 bp GAGGTACACAGGAAGACAGCTCTCCAATGGCTTCAGGGTTTTGGGTATAAAATGCACAACCCTGGCCGTTaGACAACTTCACTAAATGCT +
Preference number: 4 (lower is better)
Translates to: EVHRKTALQWLQGFGYKMHNPGR*TTSLNA
Trigger: AGCATTTAGTGAAGTTGTGCAACGGCCAGGGTTGTG...CATTTTATACCCAAAACCCTGAAGCCATTGGAGAGCTGTCTTCCTGTGTACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
CDS-3UTR GCA 90 bp CGTGGGCCGATGAAGGTTGAGCATGTATATCAAATGCTGCTTCTCGTTCTTGAGCTGGGTTTAGGAAAATaGAGACCCTCTTCTTCAGAG +
Preference number: 4 (lower is better)
Translates to: RGPMKVEHVYQMLLLVLELGLGK*RPSSSE
Trigger: CTCTGAAGAAGAGGGTCTGCATTTTCCTAAACCCAG...CTCAAGAACGAGAAGCAGCATTTGATATACATGCTCAACCTTCATCGGCCCACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366983.5
ENST00000464547.5
CDS-3UTR CCA 90 bp TGTGACACAAACATCGGAAGAGTACATTGCCTAGTTTTCTTGCACACACAATTTACAGGCAGGGGACGATaGCAGAAGCACTCACTTCCG +
Preference number: 4 (lower is better)
Translates to: CDTNIGRVHCLVFLHTQFTGRGR*QKHSLP
Trigger: CGGAAGTGAGTGCTTCTGCCATCGTCCCCTGCCTGT...AAATTGTGTGTGCAAGAAAACTAGGCAATGTACTCTTCCGATGTTTGTGTCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341491.9
ENST00000366987.6
CDS-3UTR CCA 90 bp CTAGAGGTACACAGGAAGACAGCTCTCCAATGGCTTCAGGGTTTTGGGTATAAAATGGTTCTCTGCTGCTaGGATTCTAGAGGTACACAG +
Preference number: 4 (lower is better)
Translates to: LEVHRKTALQWLQGFGYKMVLCC*DSRGTQ
Trigger: CTGTGTACCTCTAGAATCCCAGCAGCAGAGAACCAT...TTTATACCCAAAACCCTGAAGCCATTGGAGAGCTGTCTTCCTGTGTACCTCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613104.1
ENST00000613954.4
CDS-3UTR CCA 90 bp ATTCTAGAGGTACACAGGAAGACAGCTCTCCAATGGCTTCAGGGTTTTGGGTATGCTGACAAGCTCTTCTaGCCACCTGAATATCTTGAG +
Preference number: 4 (lower is better)
Translates to: ILEVHRKTALQWLQGFGYADKLF*PPEYLE
Trigger: CTCAAGATATTCAGGTGGCCAGAAGAGCTTGTCAGC...ATACCCAAAACCCTGAAGCCATTGGAGAGCTGTCTTCCTGTGTACCTCTAGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
CDS-3UTR TCA 90 bp ATTCTAGAGGTACACAGGAAGACAGCTCTCCAATGGCTTCAGGGTTTTGGGTATTGGGCCGATGAAGGTTaGGCATGTATATCAAATGCT +
Preference number: 4 (lower is better)
Translates to: ILEVHRKTALQWLQGFGYWADEG*ACISNA
Trigger: AGCATTTGATATACATGCTCAACCTTCATCGGCCCA...ATACCCAAAACCCTGAAGCCATTGGAGAGCTGTCTTCCTGTGTACCTCTAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613104.1
ENST00000613954.4
CDS-3UTR TCA 90 bp TGCAATGTTCCTTCTTTTATCTGTTGGATAAAGAGGTTTCTCTCATCTTCTGGAGGAGTCCTCCCATTCTaGGCCCGGACAATACACGTG +
Preference number: 4 (lower is better)
Translates to: CNVPSFICWIKRFLSSSGGVLPF*ARTIHV
Trigger: CACGTGTATTGTCCGGGCTCAGAATGGGAGGACTCC...TCCAGAAGATGAGAGAAACCTCTTTATCCAACAGATAAAAGAAGGAACATTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366983.5
ENST00000464547.5
CDS-3UTR TCA 90 bp ACAACTTCACTAAATGCTGTTCTCACTCCACATCCCCTACGAGTGACAATGGTACCTAGACACAACTCCTaGCCTAAGACATTGAGTGGA +
Preference number: 4 (lower is better)
Translates to: TTSLNAVLTPHPLRVTMVPRHNS*PKTLSG
Trigger: TCCACTCAATGTCTTAGGTCAGGAGTTGTGTCTAGG...TACCATTGTCACTCGTAGGGGATGTGGAGTGAGAACAGCATTTAGTGAAGTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
CDS-3UTR TCA 90 bp AAAGTCACATCAGTGTTGTGTGACACAAACATCGGAAGAGTACATTGCCTAGTTTGTGGCCAGTGTGAGTaGCTTCTCACAGCTGCAAAC +
Preference number: 4 (lower is better)
Translates to: KVTSVLCDTNIGRVHCLVCGQCE*LLTAAN
Trigger: GTTTGCAGCTGTGAGAAGTCACTCACACTGGCCACA...AACTAGGCAATGTACTCTTCCGATGTTTGTGTCACACAACACTGATGTGACTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
CDS-3UTR GCA 90 bp ACTGGGTTTAGGAAAATGCAGACCCTCTTCTTCAGAGAAACCCTGGTGATGCCATCGGCACTTTGCAGCTaGAATCTTATTTCTTTCTCG +
Preference number: 4 (lower is better)
Translates to: TGFRKMQTLFFRETLVMPSALCS*NLISFS
Trigger: CGAGAAAGAAATAAGATTGCAGCTGCAAAGTGCCGA...TGGCATCACCAGGGTTTCTCTGAAGAAGAGGGTCTGCATTTTCCTAAACCCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336937.8
ENST00000366983.5
ENST00000464547.5
CDS-3UTR GCA 90 bp AGAGCAGCACTGGGTTTAGGAAAATGCAGACCCTCTTCTTCAGAGAAACCCTGGTTCAGATACCTCATTTaGATGAGTCAACAGCCCATA +
Preference number: 4 (lower is better)
Translates to: RAALGLGKCRPSSSEKPWFRYLI*MSQQPI
Trigger: TATGGGCTGTTGACTCATGCAAATGAGGTATCTGAA...CCAGGGTTTCTCTGAAGAAGAGGGTCTGCATTTTCCTAAACCCAGTGCTGCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336937.8
ENST00000366983.5
ENST00000464547.5
CDS-3UTR CCA 90 bp ATTCTAGAGGTACACAGGAAGACAGCTCTCCAATGGCTTCAGGGTTTTGGGTATAAGACAGCTCTCCAATaGCTTCAGGGTTTTGGGTAT +
Preference number: 4 (lower is better)
Translates to: ILEVHRKTALQWLQGFGYKTALQ*LQGFGY
Trigger: ATACCCAAAACCCTGAAGCCATTGGAGAGCTGTCTT...ATACCCAAAACCCTGAAGCCATTGGAGAGCTGTCTTCCTGTGTACCTCTAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613104.1
ENST00000613954.4
CDS-3UTR TCA 90 bp TGCAATGTTCCTTCTTTTATCTGTTGGATAAAGAGGTTTCTCTCATCTTCTGGAGTCGCTGACAGTGACTaGTTCCAGCGCAGAGGACAT +
Preference number: 4 (lower is better)
Translates to: CNVPSFICWIKRFLSSSGVADSD*FQRRGH
Trigger: ATGTCCTCTGCGCTGGAATCAGTCACTGTCAGCGAC...TCCAGAAGATGAGAGAAACCTCTTTATCCAACAGATAAAAGAAGGAACATTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366983.5
ENST00000464547.5
CDS-3UTR GCA 90 bp TGTGACACAAACATCGGAAGAGTACATTGCCTAGTTTTCTTGCACACACAATTTCCGAGGTACAGACACTaGTGCCTGAATCCTAACGGT +
Preference number: 4 (lower is better)
Translates to: CDTNIGRVHCLVFLHTQFPRYRH*CLNPNG
Trigger: ACCGTTAGGATTCAGGCAGCAGTGTCTGTACCTCGG...AAATTGTGTGTGCAAGAAAACTAGGCAATGTACTCTTCCGATGTTTGTGTCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
CDS-3UTR GCA 90 bp TGTGACACAAACATCGGAAGAGTACATTGCCTAGTTTTCTTGCACACACAATTTTCGTTTACTCCGTGTTaGCAGTCCCAGGCTGACGTA +
Preference number: 4 (lower is better)
Translates to: CDTNIGRVHCLVFLHTQFSFTPC*QSQADV
Trigger: TACGTCAGCCTGGGACTGGCAACACGGAGTAAACGA...AAATTGTGTGTGCAAGAAAACTAGGCAATGTACTCTTCCGATGTTTGTGTCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613954.4
CDS-3UTR GCA 90 bp ACAACTTCACTAAATGCTGTTCTCACTCCACATCCCCTACGAGTGACAATGGTATCGGCACTTTGCAGCTaGAATCTTATTTCTTTCTCG +
Preference number: 4 (lower is better)
Translates to: TTSLNAVLTPHPLRVTMVSALCS*NLISFS
Trigger: CGAGAAAGAAATAAGATTGCAGCTGCAAAGTGCCGA...TACCATTGTCACTCGTAGGGGATGTGGAGTGAGAACAGCATTTAGTGAAGTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
CDS-3UTR GCA 90 bp GAGGTACACAGGAAGACAGCTCTCCAATGGCTTCAGGGTTTTGGGTATAAAATGCTTGTTTCGGCACTTTaGAGCTGCAATCTTATTTCT +
Preference number: 4 (lower is better)
Translates to: EVHRKTALQWLQGFGYKMLVSAL*SCNLIS
Trigger: AGAAATAAGATTGCAGCTGCAAAGTGCCGAAACAAG...CATTTTATACCCAAAACCCTGAAGCCATTGGAGAGCTGTCTTCCTGTGTACCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613104.1
ENST00000613954.4
CDS-3UTR GCA 90 bp CTAGAGGTACACAGGAAGACAGCTCTCCAATGGCTTCAGGGTTTTGGGTATAAACTTGTTTCGGCACTTTaGAGCTGCAATCTTATTTCT +
Preference number: 4 (lower is better)
Translates to: LEVHRKTALQWLQGFGYKLVSAL*SCNLIS
Trigger: AGAAATAAGATTGCAGCTGCAAAGTGCCGAAACAAG...TTTATACCCAAAACCCTGAAGCCATTGGAGAGCTGTCTTCCTGTGTACCTCTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613104.1
ENST00000613954.4
CDS-3UTR GCA 90 bp ACAACTTCACTAAATGCTGTTCTCACTCCACATCCCCTACGAGTGACAATGGTACACAACTTCACTAAATaGTGTTCTCACTCCACATCC +
Preference number: 4 (lower is better)
Translates to: TTSLNAVLTPHPLRVTMVHNFTK*CSHSTS
Trigger: GGATGTGGAGTGAGAACAGCATTTAGTGAAGTTGTG...TACCATTGTCACTCGTAGGGGATGTGGAGTGAGAACAGCATTTAGTGAAGTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
CDS-3UTR CCA 90 bp TCACTAAATGCTGTTCTCACTCCACATCCCCTACGAGTGACAATGGTAGCCACGCCTTCTTTTATCTGTTaGATAAAGAGGTTTCTCTCA +
Preference number: 4 (lower is better)
Translates to: SLNAVLTPHPLRVTMVATPSFIC*IKRFLS
Trigger: TGAGAGAAACCTCTTTATCCAACAGATAAAAGAAGG...CGTGGCTACCATTGTCACTCGTAGGGGATGTGGAGTGAGAACAGCATTTAGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
CDS-3UTR CCA 90 bp ATTCTAGAGGTACACAGGAAGACAGCTCTCCAATGGCTTCAGGGTTTTGGGTATAGAGTCCTAACCCTTTaGAAGTTGAACTTTCTGCTT +
Preference number: 4 (lower is better)
Translates to: ILEVHRKTALQWLQGFGYRVLTL*KLNFLL
Trigger: AAGCAGAAAGTTCAACTTCCAAAGGGTTAGGACTCT...ATACCCAAAACCCTGAAGCCATTGGAGAGCTGTCTTCCTGTGTACCTCTAGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
CDS-3UTR CCA 90 bp ATTCTAGAGGTACACAGGAAGACAGCTCTCCAATGGCTTCAGGGTTTTGGGTATAAATGGAATATTCTTTaGCTCTTCCAGCCTAGACAC +
Preference number: 4 (lower is better)
Translates to: ILEVHRKTALQWLQGFGYKWNIL*LFQPRH
Trigger: GTGTCTAGGCTGGAAGAGCCAAAGAATATTCCATTT...ATACCCAAAACCCTGAAGCCATTGGAGAGCTGTCTTCCTGTGTACCTCTAGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
CDS-3UTR CCA 90 bp TGCAATGTTCCTTCTTTTATCTGTTGGATAAAGAGGTTTCTCTCATCTTCTGGAGAGGAAGATGGGAGATaGGAGAGCAGCACTGGGTTT +
Preference number: 4 (lower is better)
Translates to: CNVPSFICWIKRFLSSSGEEDGR*ESSTGF
Trigger: AAACCCAGTGCTGCTCTCCCATCTCCCATCTTCCTC...TCCAGAAGATGAGAGAAACCTCTTTATCCAACAGATAAAAGAAGGAACATTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366983.5
ENST00000464547.5
CDS-3UTR GCA 90 bp ACAACTTCACTAAATGCTGTTCTCACTCCACATCCCCTACGAGTGACAATGGTAAGCATGTATATCAAATaGTGCTTCTCGTTCTTGAGC +
Preference number: 4 (lower is better)
Translates to: TTSLNAVLTPHPLRVTMVSMYIK*CFSFLS
Trigger: GCTCAAGAACGAGAAGCAGCATTTGATATACATGCT...TACCATTGTCACTCGTAGGGGATGTGGAGTGAGAACAGCATTTAGTGAAGTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
CDS-3UTR TCA 90 bp TGTGACACAAACATCGGAAGAGTACATTGCCTAGTTTTCTTGCACACACAATTTCAAACATCTCTCCACTaGCTGTGGTTTTCAACCACA +
Preference number: 4 (lower is better)
Translates to: CDTNIGRVHCLVFLHTQFQTSLH*LWFSTT
Trigger: TGTGGTTGAAAACCACAGTCAGTGGAGAGATGTTTG...AAATTGTGTGTGCAAGAAAACTAGGCAATGTACTCTTCCGATGTTTGTGTCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
CDS-3UTR CCA 90 bp ACACGTGGGCCGATGAAGGTTGAGCATGTATATCAAATGCTGCTTCTCGTTCTTCCTTCTTTTATCTGTTaGATAAAGAGGTTTCTCTCA +
Preference number: 4 (lower is better)
Translates to: TRGPMKVEHVYQMLLLVLPSFIC*IKRFLS
Trigger: TGAGAGAAACCTCTTTATCCAACAGATAAAAGAAGG...AAGAACGAGAAGCAGCATTTGATATACATGCTCAACCTTCATCGGCCCACGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366983.5
ENST00000464547.5
CDS-3UTR GCA 90 bp TGCAATGTTCCTTCTTTTATCTGTTGGATAAAGAGGTTTCTCTCATCTTCTGGATTCAGATACCTCATTTaGATGAGTCAACAGCCCATA +
Preference number: 4 (lower is better)
Translates to: CNVPSFICWIKRFLSSSGFRYLI*MSQQPI
Trigger: TATGGGCTGTTGACTCATGCAAATGAGGTATCTGAA...TCCAGAAGATGAGAGAAACCTCTTTATCCAACAGATAAAAGAAGGAACATTGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366983.5
ENST00000464547.5
3UTR CAA 72 bp AGATCTGAGAAAAAGCATATAAAAGTCACATCAGTGTaGTGTGACACAAACATCGGAAGAGTACATTGCCTA +
Preference number: 4 (lower is better)
Translates to: RSEKKHIKVTSV*CDTNIGRVHCL
Trigger: TAGGCAATGTACTCTTCCGATGTTTGTGTCACACAACACTGATGTGACTTTTATATGCTTTTTCTCAGATCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
CDS-3UTR CCA 90 bp TGTTCCTTCTTTTATCTGTTGGATAAAGAGGTTTCTCTCATCTTCTGGAGTCCTCCTTCTTTTATCTGTTaGATAAAGAGGTTTCTCTCA +
Preference number: 4 (lower is better)
Translates to: CSFFYLLDKEVSLIFWSPPSFIC*IKRFLS
Trigger: TGAGAGAAACCTCTTTATCCAACAGATAAAAGAAGG...AGGACTCCAGAAGATGAGAGAAACCTCTTTATCCAACAGATAAAAGAAGGAACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366983.5
ENST00000464547.5
CDS GCA 90 bp GCGGGCGAGCACCGAGGACTCACGGCCGGCGCGCGGGCTGAAGGGTaGGCTCGGGCGGCGGCGAGAGAAGAGAGCTGTGCAGTGCGCGCC +
Preference number: 5 (lower is better)
Translates to: AGEHRGLTAGARAEG*ARAAAREESCAVRA
Trigger: GGCGCGCACTGCACAGCTCTCTTCTCTCGCCGCCGCCCGAGCGCACCCTTCAGCCCGCGCGCCGGCCGTGAGTCCTCGGTGCTCGCCCGC
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000465155.5
ENST00000613954.4
CDS GCA 90 bp CTGAAGGGTGCGCTCGGGCGGCGGCGAGAGAAGAGAGCTGTGCAGTaGGCGCCTGGCTGCGTGCGACTGTGGCTTGGAGAGCGTTGCATC +
Preference number: 5 (lower is better)
Translates to: LKGALGRRREKRAVQ*APGCVRLWLGERCI
Trigger: GATGCAACGCTCTCCAAGCCACAGTCGCACGCAGCCAGGCGCGCACTGCACAGCTCTCTTCTCTCGCCGCCGCCCGAGCGCACCCTTCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465155.5
ENST00000613954.4
CDS GCA 90 bp GTGCAGTGCGCGCCTGGCTGCGTGCGACTGTGGCTTGGAGAGCGTTaGATCACCCCTTTTATAGCCCTCAGGCTGGCGGCGCGGTCGTTT +
Preference number: 5 (lower is better)
Translates to: VQCAPGCVRLWLGER*ITPFIALRLAARSF
Trigger: AAACGACCGCGCCGCCAGCCTGAGGGCTATAAAAGGGGTGATGCAACGCTCTCCAAGCCACAGTCGCACGCAGCCAGGCGCGCACTGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465155.5
ENST00000613954.4
CDS GCA 90 bp CTCGGGCGGCGGCGAGAGAAGAGAGCTGTGCAGTGCGCGCCTGGCTaGGTGCGACTGTGGCTTGGAGAGCGTTGCATCACCCCTTTTATA +
Preference number: 5 (lower is better)
Translates to: LGRRREKRAVQCAPG*VRLWLGERCITPFI
Trigger: TATAAAAGGGGTGATGCAACGCTCTCCAAGCCACAGTCGCACGCAGCCAGGCGCGCACTGCACAGCTCTCTTCTCTCGCCGCCGCCCGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465155.5
ENST00000613954.4
CDS-3UTR CAA 90 bp AAGACCCACTCTGGGGCAGAATGGGAAGGGCCTGCTGAATCACTGCAGGCCCTCGCAGGCCCTCCCGCCTaGATGGTTCTCTGCTGCTGG +
Preference number: 5 (lower is better)
Translates to: KTHSGAEWEGPAESLQALAGPPA*MVLCCW
Trigger: CCAGCAGCAGAGAACCATCAAGGCGGGAGGGCCTGC...GAGGGCCTGCAGTGATTCAGCAGGCCCTTCCCATTCTGCCCCAGAGTGGGTCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613104.1
ENST00000613954.4
CDS-3UTR CAA 90 bp TCCAAGACCCACTCTGGGGCAGAATGGGAAGGGCCTGCTGAATCACTGCAGGCCGCAGGCCCTCCCGCCTaGATGGTTCTCTGCTGCTGG +
Preference number: 5 (lower is better)
Translates to: SKTHSGAEWEGPAESLQAAGPPA*MVLCCW
Trigger: CCAGCAGCAGAGAACCATCAAGGCGGGAGGGCCTGC...GGCCTGCAGTGATTCAGCAGGCCCTTCCCATTCTGCCCCAGAGTGGGTCTTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613104.1
ENST00000613954.4
CDS TCA 90 bp ATGGCAGAAGCACTCACTTCCGAGGCAGAGACCTGGCCTGGGTGTTaGAGCATCATTTTGCTCCAGGCTCCGCTCGGGGCGGCCAGGGTC +
Preference number: 5 (lower is better)
Translates to: MAEALTSEAETWPGC*SIILLQAPLGAARV
Trigger: GACCCTGGCCGCCCCGAGCGGAGCCTGGAGCAAAATGATGCTTCAACACCCAGGCCAGGTCTCTGCCTCGGAAGTGAGTGCTTCTGCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341491.9
ENST00000465155.5
CDS-3UTR CAA 90 bp GGGATTCTAGAGGTACACAGGAAGACAGCTCTCCAATGGCTTCAGGGTTTTGGGGGTCGGGCGGGCTGTTaGTCTGGCCGGCGGGCGAGC +
Preference number: 5 (lower is better)
Translates to: GILEVHRKTALQWLQGFGGRAGC*SGRRAS
Trigger: GCTCGCCCGCCGGCCAGACAAACAGCCCGCCCGACC...CCCAAAACCCTGAAGCCATTGGAGAGCTGTCTTCCTGTGTACCTCTAGAATCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341491.9
ENST00000613954.4
CDS TCA 90 bp CAGGCTGGCGGCGCGGTCGTTTACTCCGTGTTGCCAGTCCCAGGCTaGCGTAATGCTATTAATAGCTTCCCGGGAGAACCGGCCGAACGG +
Preference number: 5 (lower is better)
Translates to: QAGGAVVYSVLPVPG*RNAINSFPGEPAER
Trigger: CCGTTCGGCCGGTTCTCCCGGGAAGCTATTAATAGCATTACGTCAGCCTGGGACTGGCAACACGGAGTAAACGACCGCGCCGCCAGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613954.4
CDS CCA 90 bp CGAGAGAAGAGAGCTGTGCAGTGCGCGCCTGGCTGCGTGCGACTGTaGCTTGGAGAGCGTTGCATCACCCCTTTTATAGCCCTCAGGCTG +
Preference number: 5 (lower is better)
Translates to: REKRAVQCAPGCVRL*LGERCITPFIALRL
Trigger: CAGCCTGAGGGCTATAAAAGGGGTGATGCAACGCTCTCCAAGCCACAGTCGCACGCAGCCAGGCGCGCACTGCACAGCTCTCTTCTCTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465155.5
ENST00000613954.4
CDS CCA 90 bp GGTCTGTCGCTGACAGTGACTGATTCCAGCGCAGAGGACATCCGGTaGCAGAGGTGCTTGTTCTGGATGGCAAACCTCAGCTCTGGCCTG +
Preference number: 5 (lower is better)
Translates to: GLSLTVTDSSAEDIR*QRCLFWMANLSSGL
Trigger: CAGGCCAGAGCTGAGGTTTGCCATCCAGAACAAGCACCTCTGCCACCGGATGTCCTCTGCGCTGGAATCAGTCACTGTCAGCGACAGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366985.5
CDS-3UTR CAA 90 bp GCAGGCCCTCCCGCCTTGATGGTTCTCTGCTGCTGGGATTCTAGAGGTACACAGCGGTGGCAGAGGTGCTaGTTCTGGATGGCAAACCTC +
Preference number: 5 (lower is better)
Translates to: AGPPALMVLCCWDSRGTQRWQRC*FWMANL
Trigger: GAGGTTTGCCATCCAGAACAAGCACCTCTGCCACCG...CTGTGTACCTCTAGAATCCCAGCAGCAGAGAACCATCAAGGCGGGAGGGCCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
CDS-3UTR CAA 90 bp ACAACTTCACTAAATGCTGTTCTCACTCCACATCCCCTACGAGTGACAATGGTAGGTCGGGCGGGCTGTTaGTCTGGCCGGCGGGCGAGC +
Preference number: 5 (lower is better)
Translates to: TTSLNAVLTPHPLRVTMVGRAGC*SGRRAS
Trigger: GCTCGCCCGCCGGCCAGACAAACAGCCCGCCCGACC...TACCATTGTCACTCGTAGGGGATGTGGAGTGAGAACAGCATTTAGTGAAGTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341491.9
ENST00000613954.4
CDS-3UTR CAA 90 bp CAGCATTCACACTTTCCAGCTTCTCCGACTCCTGGGACACACCGGGGCTCATCACGGTGGCAGAGGTGCTaGTTCTGGATGGCAAACCTC +
Preference number: 5 (lower is better)
Translates to: QHSHFPASPTPGTHRGSSRWQRC*FWMANL
Trigger: GAGGTTTGCCATCCAGAACAAGCACCTCTGCCACCG...TGATGAGCCCCGGTGTGTCCCAGGAGTCGGAGAAGCTGGAAAGTGTGAATGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464547.5
CDS-3UTR CAA 90 bp GGGATTCTAGAGGTACACAGGAAGACAGCTCTCCAATGGCTTCAGGGTTTTGGGGCAGGCCCTCCCGCCTaGATGGTTCTCTGCTGCTGG +
Preference number: 5 (lower is better)
Translates to: GILEVHRKTALQWLQGFGAGPPA*MVLCCW
Trigger: CCAGCAGCAGAGAACCATCAAGGCGGGAGGGCCTGC...CCCAAAACCCTGAAGCCATTGGAGAGCTGTCTTCCTGTGTACCTCTAGAATCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613104.1
ENST00000613954.4
CDS-3UTR CAA 90 bp CTTCTGGAGTCCTCCCATTCTGAGCCCGGACAATACACGTGGGCCGATGAAGGTGGACCCAAAAGGGCCTaGGGAGTTTCTGCAGGCACT +
Preference number: 5 (lower is better)
Translates to: LLESSHSEPGQYTWADEGGPKRA*GVSAGT
Trigger: AGTGCCTGCAGAAACTCCCAAGGCCCTTTTGGGTCC...ACCTTCATCGGCCCACGTGTATTGTCCGGGCTCAGAATGGGAGGACTCCAGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366983.5
ENST00000464547.5
CDS GCA 90 bp CTGACAGTGACTGATTCCAGCGCAGAGGACATCCGGTGGCAGAGGTaGTTGTTCTGGATGGCAAACCTCAGCTCTTCTTCCGAGGCAGAG +
Preference number: 5 (lower is better)
Translates to: LTVTDSSAEDIRWQR*LFWMANLSSSSEAE
Trigger: CTCTGCCTCGGAAGAAGAGCTGAGGTTTGCCATCCAGAACAAGCACCTCTGCCACCGGATGTCCTCTGCGCTGGAATCAGTCACTGTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336937.8
CDS GCA 90 bp CTGACAGTGACTGATTCCAGCGCAGAGGACATCCGGTGGCAGAGGTaGTTGTTCTGGATGGCAAACCTCAGCTCTGGCCTGGGTGTTGAA +
Preference number: 5 (lower is better)
Translates to: LTVTDSSAEDIRWQR*LFWMANLSSGLGVE
Trigger: TTCAACACCCAGGCCAGAGCTGAGGTTTGCCATCCAGAACAAGCACCTCTGCCACCGGATGTCCTCTGCGCTGGAATCAGTCACTGTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366985.5
CDS GCA 90 bp CCTTTTATAGCCCTCAGGCTGGCGGCGCGGTCGTTTACTCCGTGTTaGCAGTCCCAGGCTGACGTAATGCTATTAATAGCTTCCCGGGAG +
Preference number: 5 (lower is better)
Translates to: PFIALRLAARSFTPC*QSQADVMLLIASRE
Trigger: CTCCCGGGAAGCTATTAATAGCATTACGTCAGCCTGGGACTGGCAACACGGAGTAAACGACCGCGCCGCCAGCCTGAGGGCTATAAAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613954.4
CDS-3UTR CAA 90 bp ATCTTCTGGAGTCCTCCCATTCTGAGCCCGGACAATACACGTGGGCCGATGAAGCGGTGGCAGAGGTGCTaGTTCTGGATGGCAAACCTC +
Preference number: 5 (lower is better)
Translates to: IFWSPPILSPDNTRGPMKRWQRC*FWMANL
Trigger: GAGGTTTGCCATCCAGAACAAGCACCTCTGCCACCG...CTTCATCGGCCCACGTGTATTGTCCGGGCTCAGAATGGGAGGACTCCAGAAGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366983.5
ENST00000464547.5
CDS-3UTR CAA 90 bp CCAAGACCCACTCTGGGGCAGAATGGGAAGGGCCTGCTGAATCACTGCAGGCCCCATCGGAAGAGTACATaGCCTAGTTTTCTTGCACAC +
Preference number: 5 (lower is better)
Translates to: PRPTLGQNGKGLLNHCRPHRKST*PSFLAH
Trigger: GTGTGCAAGAAAACTAGGCAATGTACTCTTCCGATG...GGGCCTGCAGTGATTCAGCAGGCCCTTCCCATTCTGCCCCAGAGTGGGTCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
CDS-3UTR CAA 90 bp AAAATGCAGACCCTCTTCTTCAGAGAAACCCTGGTGATGCCACAGAGGCGGCCTGGACCCAAAAGGGCCTaGGGAGTTTCTGCAGGCACT +
Preference number: 5 (lower is better)
Translates to: KMQTLFFRETLVMPQRRPGPKRA*GVSAGT
Trigger: AGTGCCTGCAGAAACTCCCAAGGCCCTTTTGGGTCC...AGGCCGCCTCTGTGGCATCACCAGGGTTTCTCTGAAGAAGAGGGTCTGCATTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336937.8
ENST00000366983.5
ENST00000464547.5
CDS GCA 90 bp CCACCATTGCTTTACCCAGAGCCTGGCCCAATGCCTGACTCGCCATaGCTCATTGGCCAACTGATAAATGAAGTGGGGATGGGGTCATCA +
Preference number: 5 (lower is better)
Translates to: PPLLYPEPGPMPDSP*LIGQLINEVGMGSS
Trigger: TGATGACCCCATCCCCACTTCATTTATCAGTTGGCCAATGAGGCATGGCGAGTCAGGCATTGGGCCAGGCTCTGGGTAAAGCAATGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492118.2
CDS-3UTR CAA 90 bp AGACCCACTCTGGGGCAGAATGGGAAGGGCCTGCTGAATCACTGCAGGCCCTCCTCTTGTTTCGGCACTTaGCAGCTGCAATCTTATTTC +
Preference number: 5 (lower is better)
Translates to: RPTLGQNGKGLLNHCRPSSCFGT*QLQSYF
Trigger: GAAATAAGATTGCAGCTGCAAAGTGCCGAAACAAGA...GGAGGGCCTGCAGTGATTCAGCAGGCCCTTCCCATTCTGCCCCAGAGTGGGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613104.1
ENST00000613954.4
CDS-3UTR CAA 90 bp ATTCTAGAGGTACACAGGAAGACAGCTCTCCAATGGCTTCAGGGTTTTGGGTATGCAGGCCCTCCCGCCTaGATGGTTCTCTGCTGCTGG +
Preference number: 5 (lower is better)
Translates to: ILEVHRKTALQWLQGFGYAGPPA*MVLCCW
Trigger: CCAGCAGCAGAGAACCATCAAGGCGGGAGGGCCTGC...ATACCCAAAACCCTGAAGCCATTGGAGAGCTGTCTTCCTGTGTACCTCTAGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613104.1
ENST00000613954.4
CDS-3UTR CAA 90 bp CCAAGACCCACTCTGGGGCAGAATGGGAAGGGCCTGCTGAATCACTGCAGGCCCCATTGCCTAGTTTTCTaGCACACACAATTTCTGGAC +
Preference number: 5 (lower is better)
Translates to: PRPTLGQNGKGLLNHCRPHCLVF*HTQFLD
Trigger: GTCCAGAAATTGTGTGTGCAAGAAAACTAGGCAATG...GGGCCTGCAGTGATTCAGCAGGCCCTTCCCATTCTGCCCCAGAGTGGGTCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
CDS-3UTR CAA 90 bp TCCAAGACCCACTCTGGGGCAGAATGGGAAGGGCCTGCTGAATCACTGCAGGCCCATCGGAAGAGTACATaGCCTAGTTTTCTTGCACAC +
Preference number: 5 (lower is better)
Translates to: SKTHSGAEWEGPAESLQAHRKST*PSFLAH
Trigger: GTGTGCAAGAAAACTAGGCAATGTACTCTTCCGATG...GGCCTGCAGTGATTCAGCAGGCCCTTCCCATTCTGCCCCAGAGTGGGTCTTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
CDS-3UTR CAA 90 bp AGACCCACTCTGGGGCAGAATGGGAAGGGCCTGCTGAATCACTGCAGGCCCTCCCTAACCCTTTGGAAGTaGAACTTTCTGCTTTCTTCC +
Preference number: 5 (lower is better)
Translates to: RPTLGQNGKGLLNHCRPSLTLWK*NFLLSS
Trigger: GGAAGAAAGCAGAAAGTTCAACTTCCAAAGGGTTAG...GGAGGGCCTGCAGTGATTCAGCAGGCCCTTCCCATTCTGCCCCAGAGTGGGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
CDS GCA 90 bp TCACACTTTCCAGCTTCTCCAATGCAAGCATTGAGTCTCCACCATTaGTTTACCCAGAGCCTGGCCCAATGCCTGACTCGCCATGCCTCA +
Preference number: 5 (lower is better)
Translates to: SHFPASPMQALSLHH*FTQSLAQCLTRHAS
Trigger: TGAGGCATGGCGAGTCAGGCATTGGGCCAGGCTCTGGGTAAAGCAATGGTGGAGACTCAATGCTTGCATTGGAGAAGCTGGAAAGTGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492118.2
CDS-3UTR CAA 90 bp TTCTGGAGTCCTCCCATTCTGAGCCCGGACAATACACGTGGGCCGATGAAGGTTAACCTCAGCTCTTCCTaGACAAAGGGCGTCAGGTTA +
Preference number: 5 (lower is better)
Translates to: FWSPPILSPDNTRGPMKVNLSSS*TKGVRL
Trigger: TAACCTGACGCCCTTTGTCAAGGAAGAGCTGAGGTT...AACCTTCATCGGCCCACGTGTATTGTCCGGGCTCAGAATGGGAGGACTCCAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366983.5
ENST00000464547.5
CDS-3UTR CAA 90 bp TCACTAAATGCTGTTCTCACTCCACATCCCCTACGAGTGACAATGGTAGCCACGCGGTGGCAGAGGTGCTaGTTCTGGATGGCAAACCTC +
Preference number: 5 (lower is better)
Translates to: SLNAVLTPHPLRVTMVATRWQRC*FWMANL
Trigger: GAGGTTTGCCATCCAGAACAAGCACCTCTGCCACCG...CGTGGCTACCATTGTCACTCGTAGGGGATGTGGAGTGAGAACAGCATTTAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
CDS-3UTR CAA 90 bp TCCAAGACCCACTCTGGGGCAGAATGGGAAGGGCCTGCTGAATCACTGCAGGCCTCTTGTTTCGGCACTTaGCAGCTGCAATCTTATTTC +
Preference number: 5 (lower is better)
Translates to: SKTHSGAEWEGPAESLQASCFGT*QLQSYF
Trigger: GAAATAAGATTGCAGCTGCAAAGTGCCGAAACAAGA...GGCCTGCAGTGATTCAGCAGGCCCTTCCCATTCTGCCCCAGAGTGGGTCTTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613104.1
ENST00000613954.4
CDS-3UTR CAA 90 bp TCCAAGACCCACTCTGGGGCAGAATGGGAAGGGCCTGCTGAATCACTGCAGGCCGACATAACAGCATATTaGCTAGAAAGCACAACCCTG +
Preference number: 5 (lower is better)
Translates to: SKTHSGAEWEGPAESLQADITAY*LESTTL
Trigger: CAGGGTTGTGCTTTCTAGCAAATATGCTGTTATGTC...GGCCTGCAGTGATTCAGCAGGCCCTTCCCATTCTGCCCCAGAGTGGGTCTTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
CDS-3UTR CAA 90 bp AAGACCCACTCTGGGGCAGAATGGGAAGGGCCTGCTGAATCACTGCAGGCCCTCCATTGCCTAGTTTTCTaGCACACACAATTTCTGGAC +
Preference number: 5 (lower is better)
Translates to: KTHSGAEWEGPAESLQALHCLVF*HTQFLD
Trigger: GTCCAGAAATTGTGTGTGCAAGAAAACTAGGCAATG...GAGGGCCTGCAGTGATTCAGCAGGCCCTTCCCATTCTGCCCCAGAGTGGGTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
CDS-3UTR CAA 90 bp AAGACCCACTCTGGGGCAGAATGGGAAGGGCCTGCTGAATCACTGCAGGCCCTCCTAACCCTTTGGAAGTaGAACTTTCTGCTTTCTTCC +
Preference number: 5 (lower is better)
Translates to: KTHSGAEWEGPAESLQALLTLWK*NFLLSS
Trigger: GGAAGAAAGCAGAAAGTTCAACTTCCAAAGGGTTAG...GAGGGCCTGCAGTGATTCAGCAGGCCCTTCCCATTCTGCCCCAGAGTGGGTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
CDS-3UTR CAA 90 bp ATTCTAGAGGTACACAGGAAGACAGCTCTCCAATGGCTTCAGGGTTTTGGGTATGCGTGCGACTGTGGCTaGGAGAGCGTTGCATCACCC +
Preference number: 5 (lower is better)
Translates to: ILEVHRKTALQWLQGFGYACDCG*ESVASP
Trigger: GGGTGATGCAACGCTCTCCAAGCCACAGTCGCACGC...ATACCCAAAACCCTGAAGCCATTGGAGAGCTGTCTTCCTGTGTACCTCTAGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613954.4
CDS TCA 90 bp GCAGTTGGTTCCCAAGGGACAATGAGTATAGGGATGAGTGTAGGATaGGTGTGGTCTGGGCATTCCTCTCAACCGGGGATCTGTGGTCAT +
Preference number: 5 (lower is better)
Translates to: AVGSQGTMSIGMSVG*VWSGHSSQPGICGH
Trigger: ATGACCACAGATCCCCGGTTGAGAGGAATGCCCAGACCACACTCATCCTACACTCATCCCTATACTCATTGTCCCTTGGGAACCAACTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492118.2
CDS CCA 90 bp ACAGAACTTTTGGGGATCTGTGGGACTTGGGCTAAGACTCTGTCATaGCCTGTCCACATTTGGAGGAGGGACACAGCCACTGGAAAGACT +
Preference number: 5 (lower is better)
Translates to: TELLGICGTWAKTLS*PVHIWRRDTATGKT
Trigger: AGTCTTTCCAGTGGCTGTGTCCCTCCTCCAAATGTGGACAGGCCATGACAGAGTCTTAGCCCAAGTCCCACAGATCCCCAAAAGTTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465155.5
CDS CCA 90 bp CCAAGGGACAATGAGTATAGGGATGAGTGTAGGATGAGTGTGGTCTaGGCATTCCTCTCAACCGGGGATCTGTGGTCATTAGCACAGTCC +
Preference number: 5 (lower is better)
Translates to: PRDNEYRDECRMSVV*AFLSTGDLWSLAQS
Trigger: GGACTGTGCTAATGACCACAGATCCCCGGTTGAGAGGAATGCCCAGACCACACTCATCCTACACTCATCCCTATACTCATTGTCCCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492118.2
CDS-3UTR CAA 90 bp ACTGGGTTTAGGAAAATGCAGACCCTCTTCTTCAGAGAAACCCTGGTGATGCCACGGTGGCAGAGGTGCTaGTTCTGGATGGCAAACCTC +
Preference number: 5 (lower is better)
Translates to: TGFRKMQTLFFRETLVMPRWQRC*FWMANL
Trigger: GAGGTTTGCCATCCAGAACAAGCACCTCTGCCACCG...TGGCATCACCAGGGTTTCTCTGAAGAAGAGGGTCTGCATTTTCCTAAACCCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336937.8
ENST00000366983.5
ENST00000464547.5
CDS-3UTR CAA 90 bp GCAGGCCCTCCCGCCTTGATGGTTCTCTGCTGCTGGGATTCTAGAGGTACACAGTCTTGTTTCGGCACTTaGCAGCTGCAATCTTATTTC +
Preference number: 5 (lower is better)
Translates to: AGPPALMVLCCWDSRGTQSCFGT*QLQSYF
Trigger: GAAATAAGATTGCAGCTGCAAAGTGCCGAAACAAGA...CTGTGTACCTCTAGAATCCCAGCAGCAGAGAACCATCAAGGCGGGAGGGCCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613104.1
ENST00000613954.4
CDS-3UTR CAA 90 bp AATGCTGTTCTCACTCCACATCCCCTACGAGTGACAATGGTAGCCACGGTGAAGGCACAACCCTGGCCGTaGCACAACTTCACTAAATGC +
Preference number: 5 (lower is better)
Translates to: NAVLTPHPLRVTMVATVKAQPWP*HNFTKC
Trigger: GCATTTAGTGAAGTTGTGCAACGGCCAGGGTTGTGC...CTTCACCGTGGCTACCATTGTCACTCGTAGGGGATGTGGAGTGAGAACAGCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
CDS-3UTR CAA 90 bp CTCTGCTGCTGGGATTCTAGAGGTACACAGGAAGACAGCTCTCCAATGGCTTCAGCACAACCCTGGCCGTaGCACAACTTCACTAAATGC +
Preference number: 5 (lower is better)
Translates to: LCCWDSRGTQEDSSPMASAQPWP*HNFTKC
Trigger: GCATTTAGTGAAGTTGTGCAACGGCCAGGGTTGTGC...TGAAGCCATTGGAGAGCTGTCTTCCTGTGTACCTCTAGAATCCCAGCAGCAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
CDS-3UTR CAA 90 bp GCAGGCCCTCCCGCCTTGATGGTTCTCTGCTGCTGGGATTCTAGAGGTACACAGAAAGTCACATCAGTGTaGTGTGACACAAACATCGGA +
Preference number: 5 (lower is better)
Translates to: AGPPALMVLCCWDSRGTQKVTSV*CDTNIG
Trigger: TCCGATGTTTGTGTCACACAACACTGATGTGACTTT...CTGTGTACCTCTAGAATCCCAGCAGCAGAGAACCATCAAGGCGGGAGGGCCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
CDS-3UTR CAA 90 bp CCTCCCGCCTTGATGGTTCTCTGCTGCTGGGATTCTAGAGGTACACAGGAAGACACTTTGGAACTGAGTTaGCAACAGAGGACCTGCCAT +
Preference number: 5 (lower is better)
Translates to: PPALMVLCCWDSRGTQEDTLELS*QQRTCH
Trigger: ATGGCAGGTCCTCTGTTGCAAACTCAGTTCCAAAGT...GTCTTCCTGTGTACCTCTAGAATCCCAGCAGCAGAGAACCATCAAGGCGGGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
CDS-3UTR CAA 90 bp AGATGGGAGAGCAGCACTGGGTTTAGGAAAATGCAGACCCTCTTCTTCAGAGAAGGACCCAAAAGGGCCTaGGGAGTTTCTGCAGGCACT +
Preference number: 5 (lower is better)
Translates to: RWESSTGFRKMQTLFFREGPKRA*GVSAGT
Trigger: AGTGCCTGCAGAAACTCCCAAGGCCCTTTTGGGTCC...TTCTCTGAAGAAGAGGGTCTGCATTTTCCTAAACCCAGTGCTGCTCTCCCATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336937.8
ENST00000366983.5
ENST00000464547.5
CDS-3UTR CAA 90 bp GGGATTCTAGAGGTACACAGGAAGACAGCTCTCCAATGGCTTCAGGGTTTTGGGGTGGCTTGGAGAGCGTaGCATCACCCCTTTTATAGC +
Preference number: 5 (lower is better)
Translates to: GILEVHRKTALQWLQGFGVAWRA*HHPFYS
Trigger: GCTATAAAAGGGGTGATGCAACGCTCTCCAAGCCAC...CCCAAAACCCTGAAGCCATTGGAGAGCTGTCTTCCTGTGTACCTCTAGAATCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000613954.4
CDS-3UTR CAA 90 bp CTCTGCTGCTGGGATTCTAGAGGTACACAGGAAGACAGCTCTCCAATGGCTTCAAACCTCAGCTCTTCCTaGACAAAGGGCGTCAGGTTA +
Preference number: 5 (lower is better)
Translates to: LCCWDSRGTQEDSSPMASNLSSS*TKGVRL
Trigger: TAACCTGACGCCCTTTGTCAAGGAAGAGCTGAGGTT...TGAAGCCATTGGAGAGCTGTCTTCCTGTGTACCTCTAGAATCCCAGCAGCAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
CDS-3UTR CAA 90 bp TGGAGTCCTCCCATTCTGAGCCCGGACAATACACGTGGGCCGATGAAGGTTGAGTCTTGTTTCGGCACTTaGCAGCTGCAATCTTATTTC +
Preference number: 5 (lower is better)
Translates to: WSPPILSPDNTRGPMKVESCFGT*QLQSYF
Trigger: GAAATAAGATTGCAGCTGCAAAGTGCCGAAACAAGA...CTCAACCTTCATCGGCCCACGTGTATTGTCCGGGCTCAGAATGGGAGGACTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366983.5
ENST00000464547.5
CDS GCA 90 bp CACCGTCACATCCATTGTGTTAACTGCTTTGCCACCTCCTCATTCTaGAACTGGCATTTCTGCTACCAGCTACAAGGCCCTTCTTGGGAA +
Preference number: 5 (lower is better)
Translates to: HRHIHCVNCFATSSF*NWHFCYQLQGPSWE
Trigger: TTCCCAAGAAGGGCCTTGTAGCTGGTAGCAGAAATGCCAGTTGCAGAATGAGGAGGTGGCAAAGCAGTTAACACAATGGATGTGACGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465155.5
CDS-3UTR CAA 90 bp ACAACTTCACTAAATGCTGTTCTCACTCCACATCCCCTACGAGTGACAATGGTACGGTGGCAGAGGTGCTaGTTCTGGATGGCAAACCTC +
Preference number: 5 (lower is better)
Translates to: TTSLNAVLTPHPLRVTMVRWQRC*FWMANL
Trigger: GAGGTTTGCCATCCAGAACAAGCACCTCTGCCACCG...TACCATTGTCACTCGTAGGGGATGTGGAGTGAGAACAGCATTTAGTGAAGTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
CDS-3UTR CAA 90 bp GGGATTCTAGAGGTACACAGGAAGACAGCTCTCCAATGGCTTCAGGGTTTTGGGACTTTGGAACTGAGTTaGCAACAGAGGACCTGCCAT +
Preference number: 5 (lower is better)
Translates to: GILEVHRKTALQWLQGFGTLELS*QQRTCH
Trigger: ATGGCAGGTCCTCTGTTGCAAACTCAGTTCCAAAGT...CCCAAAACCCTGAAGCCATTGGAGAGCTGTCTTCCTGTGTACCTCTAGAATCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
CDS-3UTR CAA 90 bp AGCCTTCAGTTCAGCATTCACACTTTCCAGCTTCTCCGACTCCTGGGACACACCTCTTGTTTCGGCACTTaGCAGCTGCAATCTTATTTC +
Preference number: 5 (lower is better)
Translates to: SLQFSIHTFQLLRLLGHTSCFGT*QLQSYF
Trigger: GAAATAAGATTGCAGCTGCAAAGTGCCGAAACAAGA...GGTGTGTCCCAGGAGTCGGAGAAGCTGGAAAGTGTGAATGCTGAACTGAAGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464547.5
CDS-3UTR CAA 90 bp ATTCTAGAGGTACACAGGAAGACAGCTCTCCAATGGCTTCAGGGTTTTGGGTATAACCTCAGCTCTTCCTaGACAAAGGGCGTCAGGTTA +
Preference number: 5 (lower is better)
Translates to: ILEVHRKTALQWLQGFGYNLSSS*TKGVRL
Trigger: TAACCTGACGCCCTTTGTCAAGGAAGAGCTGAGGTT...ATACCCAAAACCCTGAAGCCATTGGAGAGCTGTCTTCCTGTGTACCTCTAGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
CDS-3UTR CAA 90 bp GAGAGCAGCACTGGGTTTAGGAAAATGCAGACCCTCTTCTTCAGAGAAACCCTGTCTTGTTTCGGCACTTaGCAGCTGCAATCTTATTTC +
Preference number: 5 (lower is better)
Translates to: ESSTGFRKMQTLFFRETLSCFGT*QLQSYF
Trigger: GAAATAAGATTGCAGCTGCAAAGTGCCGAAACAAGA...CAGGGTTTCTCTGAAGAAGAGGGTCTGCATTTTCCTAAACCCAGTGCTGCTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336937.8
ENST00000366983.5
ENST00000464547.5
CDS-3UTR CAA 90 bp TCACTAAATGCTGTTCTCACTCCACATCCCCTACGAGTGACAATGGTAGCCACGCATTGCCTAGTTTTCTaGCACACACAATTTCTGGAC +
Preference number: 5 (lower is better)
Translates to: SLNAVLTPHPLRVTMVATHCLVF*HTQFLD
Trigger: GTCCAGAAATTGTGTGTGCAAGAAAACTAGGCAATG...CGTGGCTACCATTGTCACTCGTAGGGGATGTGGAGTGAGAACAGCATTTAGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
CDS-3UTR CAA 90 bp TTGATGGTTCTCTGCTGCTGGGATTCTAGAGGTACACAGGAAGACAGCTCTCCAAAAGTCACATCAGTGTaGTGTGACACAAACATCGGA +
Preference number: 5 (lower is better)
Translates to: LMVLCCWDSRGTQEDSSPKVTSV*CDTNIG
Trigger: TCCGATGTTTGTGTCACACAACACTGATGTGACTTT...TGGAGAGCTGTCTTCCTGTGTACCTCTAGAATCCCAGCAGCAGAGAACCATCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
CDS-3UTR CAA 90 bp TTGATGGTTCTCTGCTGCTGGGATTCTAGAGGTACACAGGAAGACAGCTCTCCACTAACCCTTTGGAAGTaGAACTTTCTGCTTTCTTCC +
Preference number: 5 (lower is better)
Translates to: LMVLCCWDSRGTQEDSSPLTLWK*NFLLSS
Trigger: GGAAGAAAGCAGAAAGTTCAACTTCCAAAGGGTTAG...TGGAGAGCTGTCTTCCTGTGTACCTCTAGAATCCCAGCAGCAGAGAACCATCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
CDS GCA 90 bp ACACACCTGTTTTTATACATCCACCGTCACATCCATTGTGTTAACTaGTTTGCCACCTCCTCATTCTGCAACTGGCATTTCTGCTACCAG +
Preference number: 5 (lower is better)
Translates to: THLFLYIHRHIHCVN*FATSSFCNWHFCYQ
Trigger: CTGGTAGCAGAAATGCCAGTTGCAGAATGAGGAGGTGGCAAAGCAGTTAACACAATGGATGTGACGGTGGATGTATAAAAACAGGTGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000465155.5
CDS GCA 90 bp CAGACAGAGAAGAAGCCCTCTGGCAAGTCTCGAACATTTAAGGAGTaGCTCCTTCATACCAGAAACCTTAGGGGCACTATCTCATTTAAT +
Preference number: 5 (lower is better)
Translates to: QTEKKPSGKSRTFKE*LLHTRNLRGTISFN
Trigger: ATTAAATGAGATAGTGCCCCTAAGGTTTCTGGTATGAAGGAGGCACTCCTTAAATGTTCGAGACTTGCCAGAGGGCTTCTTCTCTGTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492118.2
CDS-3UTR CAA 90 bp AAAGTCACATCAGTGTTGTGTGACACAAACATCGGAAGAGTACATTGCCTAGTTGCACAACCCTGGCCGTaGCACAACTTCACTAAATGC +
Preference number: 5 (lower is better)
Translates to: KVTSVLCDTNIGRVHCLVAQPWP*HNFTKC
Trigger: GCATTTAGTGAAGTTGTGCAACGGCCAGGGTTGTGC...AACTAGGCAATGTACTCTTCCGATGTTTGTGTCACACAACACTGATGTGACTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
CDS-3UTR CAA 90 bp GAGGTACACAGGAAGACAGCTCTCCAATGGCTTCAGGGTTTTGGGTATAAAATGTCTTGTTTCGGCACTTaGCAGCTGCAATCTTATTTC +
Preference number: 5 (lower is better)
Translates to: EVHRKTALQWLQGFGYKMSCFGT*QLQSYF
Trigger: GAAATAAGATTGCAGCTGCAAAGTGCCGAAACAAGA...CATTTTATACCCAAAACCCTGAAGCCATTGGAGAGCTGTCTTCCTGTGTACCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613104.1
ENST00000613954.4
CDS-3UTR CAA 90 bp AAAGTCACATCAGTGTTGTGTGACACAAACATCGGAAGAGTACATTGCCTAGTTGACATAACAGCATATTaGCTAGAAAGCACAACCCTG +
Preference number: 5 (lower is better)
Translates to: KVTSVLCDTNIGRVHCLVDITAY*LESTTL
Trigger: CAGGGTTGTGCTTTCTAGCAAATATGCTGTTATGTC...AACTAGGCAATGTACTCTTCCGATGTTTGTGTCACACAACACTGATGTGACTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
CDS-3UTR CAA 90 bp TGTGACACAAACATCGGAAGAGTACATTGCCTAGTTTTCTTGCACACACAATTTCATCGGAAGAGTACATaGCCTAGTTTTCTTGCACAC +
Preference number: 5 (lower is better)
Translates to: CDTNIGRVHCLVFLHTQFHRKST*PSFLAH
Trigger: GTGTGCAAGAAAACTAGGCAATGTACTCTTCCGATG...AAATTGTGTGTGCAAGAAAACTAGGCAATGTACTCTTCCGATGTTTGTGTCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
CDS-3UTR CAA 90 bp TGTGACACAAACATCGGAAGAGTACATTGCCTAGTTTTCTTGCACACACAATTTAAAGTCACATCAGTGTaGTGTGACACAAACATCGGA +
Preference number: 5 (lower is better)
Translates to: CDTNIGRVHCLVFLHTQFKVTSV*CDTNIG
Trigger: TCCGATGTTTGTGTCACACAACACTGATGTGACTTT...AAATTGTGTGTGCAAGAAAACTAGGCAATGTACTCTTCCGATGTTTGTGTCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000366987.6
ENST00000613954.4
CDS CAA 90 bp CTCCGCTCGGGGCGGCCAGGGTCGGGACGGGGTCGGGCGGGCTGTTaGTCTGGCCGGCGGGCGAGCACCGAGGACTCACGGCCGGCGCGC +
Preference number: 6 (lower is better)
Translates to: LRSGRPGSGRGRAGC*SGRRASTEDSRPAR
Trigger: GCGCGCCGGCCGTGAGTCCTCGGTGCTCGCCCGCCGGCCAGACAAACAGCCCGCCCGACCCCGTCCCGACCCTGGCCGCCCCGAGCGGAG
80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000465155.5
ENST00000613954.4
CDS GCA 72 bp CACCGAGGACTCACGGCCGGCGCGCGGGCTGAAGGGTaGGCTCGGGCGGCGGCGAGAGAAGAGAGCTGTGCA +
Preference number: 6 (lower is better)
Translates to: HRGLTAGARAEG*ARAAAREESCA
Trigger: TGCACAGCTCTCTTCTCTCGCCGCCGCCCGAGCGCACCCTTCAGCCCGCGCGCCGGCCGTGAGTCCTCGGTG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341491.9
ENST00000465155.5
ENST00000613954.4
CDS GCA 72 bp GCGCTCGGGCGGCGGCGAGAGAAGAGAGCTGTGCAGTaGGCGCCTGGCTGCGTGCGACTGTGGCTTGGAGAG +
Preference number: 6 (lower is better)
Translates to: ALGRRREKRAVQ*APGCVRLWLGE
Trigger: CTCTCCAAGCCACAGTCGCACGCAGCCAGGCGCGCACTGCACAGCTCTCTTCTCTCGCCGCCGCCCGAGCGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465155.5
ENST00000613954.4
CDS GCA 72 bp AGGGTGCGCTCGGGCGGCGGCGAGAGAAGAGAGCTGTaGAGTGCGCGCCTGGCTGCGTGCGACTGTGGCTTG +
Preference number: 6 (lower is better)
Translates to: RVRSGGGERREL*SARLAACDCGL
Trigger: CAAGCCACAGTCGCACGCAGCCAGGCGCGCACTGCACAGCTCTCTTCTCTCGCCGCCGCCCGAGCGCACCCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465155.5
ENST00000613954.4
CDS CCA 72 bp GCGGCGGCGAGAGAAGAGAGCTGTGCAGTGCGCGCCTaGCTGCGTGCGACTGTGGCTTGGAGAGCGTTGCAT +
Preference number: 6 (lower is better)
Translates to: AAAREESCAVRA*LRATVAWRALH
Trigger: ATGCAACGCTCTCCAAGCCACAGTCGCACGCAGCCAGGCGCGCACTGCACAGCTCTCTTCTCTCGCCGCCGC
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465155.5
ENST00000613954.4
CDS GCA 72 bp AGGCAGAGACCTGGCCTGGGTGTTGAAGCATCATTTTaGTCCAGGCTCCGCTCGGGGCGGCCAGGGTCGGGA +
Preference number: 6 (lower is better)
Translates to: RQRPGLGVEASF*SRLRSGRPGSG
Trigger: TCCCGACCCTGGCCGCCCCGAGCGGAGCCTGGAGCAAAATGATGCTTCAACACCCAGGCCAGGTCTCTGCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341491.9
ENST00000465155.5
CDS GCA 72 bp GCGCCTGGCTGCGTGCGACTGTGGCTTGGAGAGCGTTaGATCACCCCTTTTATAGCCCTCAGGCTGGCGGCG +
Preference number: 6 (lower is better)
Translates to: APGCVRLWLGER*ITPFIALRLAA
Trigger: CGCCGCCAGCCTGAGGGCTATAAAAGGGGTGATGCAACGCTCTCCAAGCCACAGTCGCACGCAGCCAGGCGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465155.5
ENST00000613954.4
CDS GCA 72 bp CGGCGAGAGAAGAGAGCTGTGCAGTGCGCGCCTGGCTaGGTGCGACTGTGGCTTGGAGAGCGTTGCATCACC +
Preference number: 6 (lower is better)
Translates to: RREKRAVQCAPG*VRLWLGERCIT
Trigger: GGTGATGCAACGCTCTCCAAGCCACAGTCGCACGCAGCCAGGCGCGCACTGCACAGCTCTCTTCTCTCGCCG
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465155.5
ENST00000613954.4
CDS CAA 72 bp CGCGCCTGGCTGCGTGCGACTGTGGCTTGGAGAGCGTaGCATCACCCCTTTTATAGCCCTCAGGCTGGCGGC +
Preference number: 6 (lower is better)
Translates to: RAWLRATVAWRA*HHPFYSPQAGG
Trigger: GCCGCCAGCCTGAGGGCTATAAAAGGGGTGATGCAACGCTCTCCAAGCCACAGTCGCACGCAGCCAGGCGCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465155.5
ENST00000613954.4
CDS CAA 90 bp TGTGCAGTGCGCGCCTGGCTGCGTGCGACTGTGGCTTGGAGAGCGTaGCATCACCCCTTTTATAGCCCTCAGGCTGGCGGCGCGGTCGTT +
Preference number: 6 (lower is better)
Translates to: CAVRAWLRATVAWRA*HHPFYSPQAGGAVV
Trigger: AACGACCGCGCCGCCAGCCTGAGGGCTATAAAAGGGGTGATGCAACGCTCTCCAAGCCACAGTCGCACGCAGCCAGGCGCGCACTGCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465155.5
ENST00000613954.4
CDS CAA 90 bp GATGGCAGAAGCACTCACTTCCGAGGCAGAGACCTGGCCTGGGTGTaGAAGCATCATTTTGCTCCAGGCTCCGCTCGGGGCGGCCAGGGT +
Preference number: 6 (lower is better)
Translates to: DGRSTHFRGRDLAWV*KHHFAPGSARGGQG
Trigger: ACCCTGGCCGCCCCGAGCGGAGCCTGGAGCAAAATGATGCTTCAACACCCAGGCCAGGTCTCTGCCTCGGAAGTGAGTGCTTCTGCCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341491.9
ENST00000465155.5
CDS TCA 72 bp GCACTCACTTCCGAGGCAGAGACCTGGCCTGGGTGTTaGAGCATCATTTTGCTCCAGGCTCCGCTCGGGGCG +
Preference number: 6 (lower is better)
Translates to: ALTSEAETWPGC*SIILLQAPLGA
Trigger: CGCCCCGAGCGGAGCCTGGAGCAAAATGATGCTTCAACACCCAGGCCAGGTCTCTGCCTCGGAAGTGAGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341491.9
ENST00000465155.5
CDS TCA 72 bp GATGGACACCCCGAGGGGTCTGTCGCTGACAGTGACTaGTTCCAGCGCAGAGGACATCCGGTGGCAGAGGTG +
Preference number: 6 (lower is better)
Translates to: DGHPEGSVADSD*FQRRGHPVAEV
Trigger: CACCTCTGCCACCGGATGTCCTCTGCGCTGGAATCAGTCACTGTCAGCGACAGACCCCTCGGGGTGTCCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000336937.8
ENST00000341491.9
ENST00000366981.8
ENST00000366983.5
ENST00000366985.5
ENST00000366987.6
ENST00000464547.5
ENST00000465155.5
ENST00000613104.1
ENST00000613954.4
CDS GCA 72 bp GAGAGAAGAGAGCTGTGCAGTGCGCGCCTGGCTGCGTaGGACTGTGGCTTGGAGAGCGTTGCATCACCCCTT +
Preference number: 6 (lower is better)
Translates to: ERRELCSARLAA*DCGLESVASPL
Trigger: AAGGGGTGATGCAACGCTCTCCAAGCCACAGTCGCACGCAGCCAGGCGCGCACTGCACAGCTCTCTTCTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465155.5
ENST00000613954.4
CDS CCA 72 bp TGTGCAGTGCGCGCCTGGCTGCGTGCGACTGTGGCTTaGAGAGCGTTGCATCACCCCTTTTATAGCCCTCAG +
Preference number: 6 (lower is better)
Translates to: CAVRAWLRATVA*RALHHPFYSPQ
Trigger: CTGAGGGCTATAAAAGGGGTGATGCAACGCTCTCCAAGCCACAGTCGCACGCAGCCAGGCGCGCACTGCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465155.5
ENST00000613954.4
CDS CCA 72 bp AGAGCTGTGCAGTGCGCGCCTGGCTGCGTGCGACTGTaGCTTGGAGAGCGTTGCATCACCCCTTTTATAGCC +
Preference number: 6 (lower is better)
Translates to: RAVQCAPGCVRL*LGERCITPFIA
Trigger: GGCTATAAAAGGGGTGATGCAACGCTCTCCAAGCCACAGTCGCACGCAGCCAGGCGCGCACTGCACAGCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465155.5
ENST00000613954.4
CDS TCA 72 bp GGCATGTCCTGCAGCCTGGAAGCTGATGGACATGTATaGACCGGCCGAGGCTGCTGGGAGTCAGGCATCAGA +
Preference number: 6 (lower is better)
Translates to: GMSCSLEADGHV*TGRGCWESGIR
Trigger: TCTGATGCCTGACTCCCAGCAGCCTCGGCCGGTTCATACATGTCCATCAGCTTCCAGGCTGCAGGACATGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465155.5
CDS CAA 72 bp GATTCCAGCGCAGAGGACATCCGGTGGCAGAGGTGCTaGTTCTGGATGGCAAACCTCAGCTCTGGCCTGGGT +
Preference number: 6 (lower is better)
Translates to: DSSAEDIRWQRC*FWMANLSSGLG
Trigger: ACCCAGGCCAGAGCTGAGGTTTGCCATCCAGAACAAGCACCTCTGCCACCGGATGTCCTCTGCGCTGGAATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366985.5
CDS GCA 72 bp ACTGATTCCAGCGCAGAGGACATCCGGTGGCAGAGGTaGTTGTTCTGGATGGCAAACCTCAGCTCTGGCCTG +
Preference number: 6 (lower is better)
Translates to: TDSSAEDIRWQR*LFWMANLSSGL
Trigger: CAGGCCAGAGCTGAGGTTTGCCATCCAGAACAAGCACCTCTGCCACCGGATGTCCTCTGCGCTGGAATCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366985.5
CDS GCA 72 bp GCCCTCAGGCTGGCGGCGCGGTCGTTTACTCCGTGTTaGCAGTCCCAGGCTGACGTAATGCTATTAATAGCT +
Preference number: 6 (lower is better)
Translates to: ALRLAARSFTPC*QSQADVMLLIA
Trigger: AGCTATTAATAGCATTACGTCAGCCTGGGACTGGCAACACGGAGTAAACGACCGCGCCGCCAGCCTGAGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613954.4
CDS CCA 72 bp GGCAGAAGCACTCACTTCCGAGGCAGAGACCTGGCCTaGGTGTTGAAGCATCATTTTGCTCCAGGCTCCGCT +
Preference number: 6 (lower is better)
Translates to: GRSTHFRGRDLA*VLKHHFAPGSA
Trigger: AGCGGAGCCTGGAGCAAAATGATGCTTCAACACCCAGGCCAGGTCTCTGCCTCGGAAGTGAGTGCTTCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341491.9
ENST00000465155.5
CDS CCA 72 bp AGCGCAGAGGACATCCGGTGGCAGAGGTGCTTGTTCTaGATGGCAAACCTCAGCTCTGGCCTGGGTGTTGAA +
Preference number: 6 (lower is better)
Translates to: SAEDIRWQRCLF*MANLSSGLGVE
Trigger: TTCAACACCCAGGCCAGAGCTGAGGTTTGCCATCCAGAACAAGCACCTCTGCCACCGGATGTCCTCTGCGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366985.5
CDS CAA 90 bp ACAGTGACTGATTCCAGCGCAGAGGACATCCGGTGGCAGAGGTGCTaGTTCTGGATGGCAAACCTCAGCTCTTCTTCCGAGGCAGAGACC +
Preference number: 6 (lower is better)
Translates to: TVTDSSAEDIRWQRC*FWMANLSSSSEAET
Trigger: GGTCTCTGCCTCGGAAGAAGAGCTGAGGTTTGCCATCCAGAACAAGCACCTCTGCCACCGGATGTCCTCTGCGCTGGAATCAGTCACTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336937.8
CDS CAA 90 bp ACAGTGACTGATTCCAGCGCAGAGGACATCCGGTGGCAGAGGTGCTaGTTCTGGATGGCAAACCTCAGCTCTGGCCTGGGTGTTGAAGCA +
Preference number: 6 (lower is better)
Translates to: TVTDSSAEDIRWQRC*FWMANLSSGLGVEA
Trigger: TGCTTCAACACCCAGGCCAGAGCTGAGGTTTGCCATCCAGAACAAGCACCTCTGCCACCGGATGTCCTCTGCGCTGGAATCAGTCACTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366985.5
CDS TCA 72 bp GGCGCGGTCGTTTACTCCGTGTTGCCAGTCCCAGGCTaGCGTAATGCTATTAATAGCTTCCCGGGAGAACCG +
Preference number: 6 (lower is better)
Translates to: GAVVYSVLPVPG*RNAINSFPGEP
Trigger: CGGTTCTCCCGGGAAGCTATTAATAGCATTACGTCAGCCTGGGACTGGCAACACGGAGTAAACGACCGCGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613954.4
CDS CCA 72 bp CTGACAGTGACTGATTCCAGCGCAGAGGACATCCGGTaGCAGAGGTGCTTGTTCTGGATGGCAAACCTCAGC +
Preference number: 6 (lower is better)
Translates to: LTVTDSSAEDIR*QRCLFWMANLS
Trigger: GCTGAGGTTTGCCATCCAGAACAAGCACCTCTGCCACCGGATGTCCTCTGCGCTGGAATCAGTCACTGTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000336937.8
ENST00000341491.9
ENST00000366981.8
ENST00000366983.5
ENST00000366985.5
ENST00000366987.6
ENST00000464547.5
ENST00000465155.5
ENST00000613954.4
CDS CCA 72 bp GAAGCCTCTTTAACTGGGCTGGCATGTCCTGCAGCCTaGAAGCTGATGGACATGTATGAACCGGCCGAGGCT +
Preference number: 6 (lower is better)
Translates to: EASLTGLACPAA*KLMDMYEPAEA
Trigger: AGCCTCGGCCGGTTCATACATGTCCATCAGCTTCCAGGCTGCAGGACATGCCAGCCCAGTTAAAGAGGCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465155.5
CDS CAA 72 bp GATTCCAGCGCAGAGGACATCCGGTGGCAGAGGTGCTaGTTCTGGATGGCAAACCTCAGCTCTTCTTCCGAG +
Preference number: 6 (lower is better)
Translates to: DSSAEDIRWQRC*FWMANLSSSSE
Trigger: CTCGGAAGAAGAGCTGAGGTTTGCCATCCAGAACAAGCACCTCTGCCACCGGATGTCCTCTGCGCTGGAATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336937.8
CDS CAA 90 bp ACAGTGACTGATTCCAGCGCAGAGGACATCCGGTGGCAGAGGTGCTaGTTCTGGATGGCAAACCTCAGCTCTTCCTTGACAAAGGGCGTC +
Preference number: 6 (lower is better)
Translates to: TVTDSSAEDIRWQRC*FWMANLSSSLTKGV
Trigger: GACGCCCTTTGTCAAGGAAGAGCTGAGGTTTGCCATCCAGAACAAGCACCTCTGCCACCGGATGTCCTCTGCGCTGGAATCAGTCACTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341491.9
ENST00000366981.8
ENST00000366983.5
ENST00000366987.6
ENST00000464547.5
ENST00000465155.5
ENST00000613954.4
CDS GCA 72 bp ACTGATTCCAGCGCAGAGGACATCCGGTGGCAGAGGTaGTTGTTCTGGATGGCAAACCTCAGCTCTTCTTCC +
Preference number: 6 (lower is better)
Translates to: TDSSAEDIRWQR*LFWMANLSSSS
Trigger: GGAAGAAGAGCTGAGGTTTGCCATCCAGAACAAGCACCTCTGCCACCGGATGTCCTCTGCGCTGGAATCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336937.8
CDS GCA 72 bp CCAGCTTCTCCAATGCAAGCATTGAGTCTCCACCATTaGTTTACCCAGAGCCTGGCCCAATGCCTGACTCGC +
Preference number: 6 (lower is better)
Translates to: PASPMQALSLHH*FTQSLAQCLTR
Trigger: GCGAGTCAGGCATTGGGCCAGGCTCTGGGTAAAGCAATGGTGGAGACTCAATGCTTGCATTGGAGAAGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492118.2
CDS CCA 72 bp TTGGGGATCTGTGGGACTTGGGCTAAGACTCTGTCATaGCCTGTCCACATTTGGAGGAGGGACACAGCCACT +
Preference number: 6 (lower is better)
Translates to: LGICGTWAKTLS*PVHIWRRDTAT
Trigger: AGTGGCTGTGTCCCTCCTCCAAATGTGGACAGGCCATGACAGAGTCTTAGCCCAAGTCCCACAGATCCCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465155.5
CDS CAA 72 bp GATTCCAGCGCAGAGGACATCCGGTGGCAGAGGTGCTaGTTCTGGATGGCAAACCTCAGCTCTTCCTTGACA +
Preference number: 6 (lower is better)
Translates to: DSSAEDIRWQRC*FWMANLSSSLT
Trigger: TGTCAAGGAAGAGCTGAGGTTTGCCATCCAGAACAAGCACCTCTGCCACCGGATGTCCTCTGCGCTGGAATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341491.9
ENST00000366981.8
ENST00000366983.5
ENST00000366987.6
ENST00000464547.5
ENST00000465155.5
ENST00000613954.4
CDS CAA 72 bp ACTGGAAAGACTGCTGAGCACCACCGGCCACCCTGCTaGCCCACAAAAGCTATTTCCCCTAGTGTCTCTCAG +
Preference number: 6 (lower is better)
Translates to: TGKTAEHHRPPC*PTKAISPSVSQ
Trigger: CTGAGAGACACTAGGGGAAATAGCTTTTGTGGGCAAGCAGGGTGGCCGGTGGTGCTCAGCAGTCTTTCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465155.5
CDS CAA 72 bp CAGCCCATATGCAGGTCTTCTGGACCCAAAAGGGCCTaGGGAGCTGGGGAGAAATCCAGACTTATGGTGGCT +
Preference number: 6 (lower is better)
Translates to: QPICRSSGPKRA*GAGEKSRLMVA
Trigger: AGCCACCATAAGTCTGGATTTCTCCCCAGCTCCCAAGGCCCTTTTGGGTCCAGAAGACCTGCATATGGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465155.5
CDS CCA 72 bp AGCCCATATGCAGGTCTTCTGGACCCAAAAGGGCCTTaGGAGCTGGGGAGAAATCCAGACTTATGGTGGCTT +
Preference number: 6 (lower is better)
Translates to: SPYAGLLDPKGP*ELGRNPDLWWL
Trigger: AAGCCACCATAAGTCTGGATTTCTCCCCAGCTCCCAAGGCCCTTTTGGGTCCAGAAGACCTGCATATGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465155.5
CDS CCA 72 bp AGTGTGGTCTGGGCATTCCTCTCAACCGGGGATCTGTaGTCATTAGCACAGTCCAGACAGAGAAGAAGCCCT +
Preference number: 6 (lower is better)
Translates to: SVVWAFLSTGDL*SLAQSRQRRSP
Trigger: AGGGCTTCTTCTCTGTCTGGACTGTGCTAATGACCACAGATCCCCGGTTGAGAGGAATGCCCAGACCACACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492118.2
CDS CAA 72 bp TCCAGCTTCTCCAATGCAAGCATTGAGTCTCCACCATaGCTTTACCCAGAGCCTGGCCCAATGCCTGACTCG +
Preference number: 6 (lower is better)
Translates to: SSFSNASIESPP*LYPEPGPMPDS
Trigger: CGAGTCAGGCATTGGGCCAGGCTCTGGGTAAAGCAATGGTGGAGACTCAATGCTTGCATTGGAGAAGCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492118.2
CDS CAA 90 bp TTCACACTTTCCAGCTTCTCCAATGCAAGCATTGAGTCTCCACCATaGCTTTACCCAGAGCCTGGCCCAATGCCTGACTCGCCATGCCTC +
Preference number: 6 (lower is better)
Translates to: FTLSSFSNASIESPP*LYPEPGPMPDSPCL
Trigger: GAGGCATGGCGAGTCAGGCATTGGGCCAGGCTCTGGGTAAAGCAATGGTGGAGACTCAATGCTTGCATTGGAGAAGCTGGAAAGTGTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492118.2
CDS CCA 72 bp CATTTGCATGAGTCAACAGCCCATATGCAGGTCTTCTaGACCCAAAAGGGCCTTGGGAGCTGGGGAGAAATC +
Preference number: 6 (lower is better)
Translates to: HLHESTAHMQVF*TQKGLGSWGEI
Trigger: GATTTCTCCCCAGCTCCCAAGGCCCTTTTGGGTCCAGAAGACCTGCATATGGGCTGTTGACTCATGCAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465155.5
CDS CAA 90 bp CGGTGGCAGAGGTGCTTGTTCTGGATGGCAAACCTCAGCTCTTCCTaGACAAAGGGCGTCAGGTTAGCAAAATCCTCAAACACCAGTGAC +
Preference number: 6 (lower is better)
Translates to: RWQRCLFWMANLSSS*TKGVRLAKSSNTSD
Trigger: GTCACTGGTGTTTGAGGATTTTGCTAACCTGACGCCCTTTGTCAAGGAAGAGCTGAGGTTTGCCATCCAGAACAAGCACCTCTGCCACCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341491.9
ENST00000366981.8
ENST00000366983.5
ENST00000366987.6
ENST00000464547.5
ENST00000465155.5
ENST00000613954.4
CDS CAA 90 bp GCCTGTGGCTCTGCTAATACTGAAGCTGCAGTTCAGATACCTCATTaGCATGAGTCAACAGCCCATATGCAGGTCTTCTGGACCCAAAAG +
Preference number: 6 (lower is better)
Translates to: ACGSANTEAAVQIPH*HESTAHMQVFWTQK
Trigger: CTTTTGGGTCCAGAAGACCTGCATATGGGCTGTTGACTCATGCAAATGAGGTATCTGAACTGCAGCTTCAGTATTAGCAGAGCCACAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336937.8
ENST00000366983.5
ENST00000464547.5
ENST00000465155.5
CDS GCA 72 bp TGCTTTGCCACCTCCTCATTCTGCAACTGGCATTTCTaGTACCAGCTACAAGGCCCTTCTTGGGAAACTATA +
Preference number: 6 (lower is better)
Translates to: CFATSSFCNWHF*YQLQGPSWETI
Trigger: TATAGTTTCCCAAGAAGGGCCTTGTAGCTGGTAGCAGAAATGCCAGTTGCAGAATGAGGAGGTGGCAAAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465155.5
CDS GCA 72 bp ATCCATTGTGTTAACTGCTTTGCCACCTCCTCATTCTaGAACTGGCATTTCTGCTACCAGCTACAAGGCCCT +
Preference number: 6 (lower is better)
Translates to: IHCVNCFATSSF*NWHFCYQLQGP
Trigger: AGGGCCTTGTAGCTGGTAGCAGAAATGCCAGTTGCAGAATGAGGAGGTGGCAAAGCAGTTAACACAATGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465155.5
CDS GCA 72 bp AAGAAGCCCTCTGGCAAGTCTCGAACATTTAAGGAGTaGCTCCTTCATACCAGAAACCTTAGGGGCACTATC +
Preference number: 6 (lower is better)
Translates to: KKPSGKSRTFKE*LLHTRNLRGTI
Trigger: GATAGTGCCCCTAAGGTTTCTGGTATGAAGGAGGCACTCCTTAAATGTTCGAGACTTGCCAGAGGGCTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492118.2
CDS TCA 72 bp GGGAGAAATCCAGACTTATGGTGGCTTAGTCGATTCTaGGTCACAGATCTCAATGAGAAGCTCATCTCCCCA +
Preference number: 6 (lower is better)
Translates to: GRNPDLWWLSRF*VTDLNEKLISP
Trigger: TGGGGAGATGAGCTTCTCATTGAGATCTGTGACTCAGAATCGACTAAGCCACCATAAGTCTGGATTTCTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465155.5
CDS CAA 90 bp CTCATTCTGCAACTGGCATTTCTGCTACCAGCTACAAGGCCCTTCTaGGGAAACTATAACCAAGTAGGGGGTTTTCTAACTCTTCTTCTG +
Preference number: 6 (lower is better)
Translates to: LILQLAFLLPATRPF*GNYNQVGGFLTLLL
Trigger: CAGAAGAAGAGTTAGAAAACCCCCTACTTGGTTATAGTTTCCCAAGAAGGGCCTTGTAGCTGGTAGCAGAAATGCCAGTTGCAGAATGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000465155.5
CDS CAA 90 bp ACCTGTTTTTATACATCCACCGTCACATCCATTGTGTTAACTGCTTaGCCACCTCCTCATTCTGCAACTGGCATTTCTGCTACCAGCTAC +
Preference number: 6 (lower is better)
Translates to: TCFYTSTVTSIVLTA*PPPHSATGISATSY
Trigger: GTAGCTGGTAGCAGAAATGCCAGTTGCAGAATGAGGAGGTGGCAAAGCAGTTAACACAATGGATGTGACGGTGGATGTATAAAAACAGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000465155.5
CDS CAA 72 bp CAACTGGCATTTCTGCTACCAGCTACAAGGCCCTTCTaGGGAAACTATAACCAAGTAGGGGGTTTTCTAACT +
Preference number: 6 (lower is better)
Translates to: QLAFLLPATRPF*GNYNQVGGFLT
Trigger: AGTTAGAAAACCCCCTACTTGGTTATAGTTTCCCAAGAAGGGCCTTGTAGCTGGTAGCAGAAATGCCAGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000465155.5
CDS GCA 72 bp AGGAACCAGACAAGAATGCAAAGCAAGTGTAACCACTaGTTGTGGATTAAGGAAATAACTTGTTTGAAGAGA +
Preference number: 6 (lower is better)
Translates to: RNQTRMQSKCNH*LWIKEITCLKR
Trigger: TCTCTTCAAACAAGTTATTTCCTTAATCCACAAGCAGTGGTTACACTTGCTTTGCATTCTTGTCTGGTTCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465155.5
CDS CAA 72 bp AACCAGACAAGAATGCAAAGCAAGTGTAACCACTGCTaGTGGATTAAGGAAATAACTTGTTTGAAGAGATTA +
Preference number: 6 (lower is better)
Translates to: NQTRMQSKCNHC*WIKEITCLKRL
Trigger: TAATCTCTTCAAACAAGTTATTTCCTTAATCCACAAGCAGTGGTTACACTTGCTTTGCATTCTTGTCTGGTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465155.5