RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ATE1 (Homo sapiens)

Ensembl gene IDs: ENSG00000107669

Ensembl transcript IDs: ENST00000224652.11, ENST00000369040.8, ENST00000369043.8, ENST00000423243.6, ENST00000485281.1, ENST00000540606.6

Found 581 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ACTCAGCAAAAGAAAGTGAGGGAAGGAGGGGGCTGGCCTCTGCTCTaGGTTACTAAGGGTGGCAGAAGCCACCCTGACTGTGACTCTCAA +
Preference number: 1 (lower is better)
Translates to: TQQKKVREGGGWPLL*VTKGGRSHPDCDSQ
Trigger: TTGAGAGTCACAGTCAGGGTGGCTTCTGCCACCCTTAGTAACTCAGAGCAGAGGCCAGCCCCCTCCTTCCCTCACTTTCTTTTGCTGAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
3UTR TCA 90 bp CCTGGCACAAATCATCAGCACAACACAGGAACTTCCCGGCAGAGGTaGACAGGTCAGTTTCTGAACAGCAGCATCCGCTCGGAGCACTTC +
Preference number: 1 (lower is better)
Translates to: PGTNHQHNTGTSRQR*TGQFLNSSIRSEHF
Trigger: GAAGTGCTCCGAGCGGATGCTGCTGTTCAGAAACTGACCTGTTCACCTCTGCCGGGAAGTTCCTGTGTTGTGCTGATGATTTGTGCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423243.6
3UTR CCA 90 bp CTGCCCCACCAGGCTGGCGTACTGCAGAACAGCAGCCTCCTCACTTaGGTCTTTCTGCTGTTTCTTATAAACACCGTAAGGCATGATGGC +
Preference number: 1 (lower is better)
Translates to: LPHQAGVLQNSSLLT*VFLLFLINTVRHDG
Trigger: GCCATCATGCCTTACGGTGTTTATAAGAAACAGCAGAAAGACCCAAGTGAGGAGGCTGCTGTTCTGCAGTACGCCAGCCTGGTGGGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423243.6
3UTR TCA 90 bp CAGATGATACACAGTTTGGGAGGATGTCAATCACCCCCACAGCAATaGTCTTTCCGTCAAGCCAGTACTGCTGGTGAAAGGAGCCATAGC +
Preference number: 1 (lower is better)
Translates to: QMIHSLGGCQSPPQQ*SFRQASTAGERSHS
Trigger: GCTATGGCTCCTTTCACCAGCAGTACTGGCTTGACGGAAAGATCATTGCTGTGGGGGTGATTGACATCCTCCCAAACTGTGTATCATCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423243.6
3UTR GCA 90 bp CAGCCAAGTAGAAGGATCTCCAATGCTCAAGTCACTCTGAGTCTTTaGTGGTGTCAACCTACAATGCCACCCTCAAGGAAAGCACAGTGG +
Preference number: 1 (lower is better)
Translates to: QPSRRISNAQVTLSL*WCQPTMPPSRKAQW
Trigger: CCACTGTGCTTTCCTTGAGGGTGGCATTGTAGGTTGACACCAGCAAAGACTCAGAGTGACTTGAGCATTGGAGATCCTTCTACTTGGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
3UTR CCA 90 bp GTGGGTGGTGACAGTTATTTCCCCACAGGTACTGAATATGTATCCTaGCACAAATCATCAGCACAACACAGGAACTTCCCGGCAGAGGTG +
Preference number: 1 (lower is better)
Translates to: VGGDSYFPTGTEYVS*HKSSAQHRNFPAEV
Trigger: CACCTCTGCCGGGAAGTTCCTGTGTTGTGCTGATGATTTGTGCCAGGATACATATTCAGTACCTGTGGGGAAATAACTGTCACCACCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000423243.6
ENST00000540606.6
3UTR TCA 90 bp TGCTTCTGGGTCCTGGTTGAAACGGCAGTACTTGGAGTTTTCAAGTaGAGGCAGGCATTGCTCAATGGGTACCCAAACATATGTCTCAGG +
Preference number: 1 (lower is better)
Translates to: CFWVLVETAVLGVFK*RQALLNGYPNICLR
Trigger: CCTGAGACATATGTTTGGGTACCCATTGAGCAATGCCTGCCTTCACTTGAAAACTCCAAGTACTGCCGTTTCAACCAGGACCCAGAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423243.6
3UTR CCA 90 bp CCAAGTAGAAGGATCTCCAATGCTCAAGTCACTCTGAGTCTTTGCTaGTGTCAACCTACAATGCCACCCTCAAGGAAAGCACAGTGGTTC +
Preference number: 1 (lower is better)
Translates to: PSRRISNAQVTLSLC*CQPTMPPSRKAQWF
Trigger: GAACCACTGTGCTTTCCTTGAGGGTGGCATTGTAGGTTGACACCAGCAAAGACTCAGAGTGACTTGAGCATTGGAGATCCTTCTACTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
3UTR TCA 90 bp GAATACAGCAGCCAAGTAGAAGGATCTCCAATGCTCAAGTCACTCTaGGTCTTTGCTGGTGTCAACCTACAATGCCACCCTCAAGGAAAG +
Preference number: 1 (lower is better)
Translates to: EYSSQVEGSPMLKSL*VFAGVNLQCHPQGK
Trigger: CTTTCCTTGAGGGTGGCATTGTAGGTTGACACCAGCAAAGACTCAGAGTGACTTGAGCATTGGAGATCCTTCTACTTGGCTGCTGTATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
3UTR TCA 90 bp CCTCACTTGGGTCTTTCTGCTGTTTCTTATAAACACCGTAAGGCATaGTGGCTCTCTTGTGAAACACCTGCAATCGGTCAGGTTCCGTAC +
Preference number: 1 (lower is better)
Translates to: PHLGLSAVSYKHRKA*WLSCETPAIGQVPY
Trigger: GTACGGAACCTGACCGATTGCAGGTGTTTCACAAGAGAGCCATCATGCCTTACGGTGTTTATAAGAAACAGCAGAAAGACCCAAGTGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423243.6
3UTR CCA 90 bp AACGGCAGTACTTGGAGTTTTCAAGTGAAGGCAGGCATTGCTCAATaGGTACCCAAACATATGTCTCAGGGCACAGCAAATCAGAAGGTC +
Preference number: 1 (lower is better)
Translates to: NGSTWSFQVKAGIAQ*VPKHMSQGTANQKV
Trigger: GACCTTCTGATTTGCTGTGCCCTGAGACATATGTTTGGGTACCCATTGAGCAATGCCTGCCTTCACTTGAAAACTCCAAGTACTGCCGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423243.6
3UTR TCA 90 bp TCAGTCTTCCCACATTCATCGGGTGGATCCTGGTGTATGGCCACTTaGTACTTGACATACAAAGAAAAGGACTGGCTGAAAGACGACTTG +
Preference number: 1 (lower is better)
Translates to: SVFPHSSGGSWCMAT*YLTYKEKDWLKDDL
Trigger: CAAGTCGTCTTTCAGCCAGTCCTTTTCTTTGTATGTCAAGTATCAAGTGGCCATACACCAGGATCCACCCGATGAATGTGGGAAGACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423243.6
3UTR GCA 90 bp TGGTTGAAACGGCAGTACTTGGAGTTTTCAAGTGAAGGCAGGCATTaGTCAATGGGTACCCAAACATATGTCTCAGGGCACAGCAAATCA +
Preference number: 1 (lower is better)
Translates to: WLKRQYLEFSSEGRH*SMGTQTYVSGHSKS
Trigger: TGATTTGCTGTGCCCTGAGACATATGTTTGGGTACCCATTGAGCAATGCCTGCCTTCACTTGAAAACTCCAAGTACTGCCGTTTCAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423243.6
3UTR TCA 90 bp TCTCAGCTAGACTGCTGGTCAAGTAACAAGGTGGGTCACTTTTCTTaGCTATGCTTTTCTAGTCCACTATCAGTATTCACTCAGCTGGGG +
Preference number: 1 (lower is better)
Translates to: SQLDCWSSNKVGHFS*LCFSSPLSVFTQLG
Trigger: CCCCAGCTGAGTGAATACTGATAGTGGACTAGAAAAGCATAGTCAAGAAAAGTGACCCACCTTGTTACTTGACCAGCAGTCTAGCTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
3UTR CCA 90 bp CTTTGCTGGTGTCAACCTACAATGCCACCCTCAAGGAAAGCACAGTaGTTCACAGACAGGGATGATTCATCATTTTCCTCTGAAAATGAA +
Preference number: 1 (lower is better)
Translates to: LCWCQPTMPPSRKAQ*FTDRDDSSFSSENE
Trigger: TTCATTTTCAGAGGAAAATGATGAATCATCCCTGTCTGTGAACCACTGTGCTTTCCTTGAGGGTGGCATTGTAGGTTGACACCAGCAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
3UTR TCA 90 bp CAAAGACAAAAACGAATAATCAGGATCGTAGTACAAATACACAGATaGTACACAGTTTGGGAGGATGTCAATCACCCCCACAGCAATGAT +
Preference number: 1 (lower is better)
Translates to: QRQKRIIRIVVQIHR*YTVWEDVNHPHSND
Trigger: ATCATTGCTGTGGGGGTGATTGACATCCTCCCAAACTGTGTATCATCTGTGTATTTGTACTACGATCCTGATTATTCGTTTTTGTCTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000423243.6
3UTR TCA 90 bp AAGAAATGGATTGTTCTAGCTCTTGTCCTGGAACAGAGGTCGGAATaGTTCCTTCTTCAATGTGATTTGTGGCATAACTATGAAAGTAAT +
Preference number: 1 (lower is better)
Translates to: KKWIVLALVLEQRSE*FLLQCDLWHNYESN
Trigger: ATTACTTTCATAGTTATGCCACAAATCACATTGAAGAAGGAATCATTCCGACCTCTGTTCCAGGACAAGAGCTAGAACAATCCATTTCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
3UTR CCA 90 bp GTGATCTTTATGAATACCATTTTACATGCTAATCACAAAGACAAATaGAGGGAAGATACAGTGATAACACCAAGTTGGACATTCAAATGC +
Preference number: 1 (lower is better)
Translates to: VIFMNTILHANHKDK*REDTVITPSWTFKC
Trigger: GCATTTGAATGTCCAACTTGGTGTTATCACTGTATCTTCCCTCCATTTGTCTTTGTGATTAGCATGTAAAATGGTATTCATAAAGATCAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
3UTR-3UTR TCA 90 bp GCTTTGCTCACTACTCTAGCTCGGTTAGCAGAGTACGCAGCACCTTGGCAGGTGGGCTGGCCTCTGCTCTaGGTTACTAAGGGTGGCAGA +
Preference number: 2 (lower is better)
Translates to: ALLTTLARLAEYAAPWQVGWPLL*VTKGGR
Trigger: TCTGCCACCCTTAGTAACTCAGAGCAGAGGCCAGCC...CACCTGCCAAGGTGCTGCGTACTCTGCTAACCGAGCTAGAGTAGTGAGCAAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
3UTR-3UTR CCA 90 bp CTGCCCCACCAGGCTGGCGTACTGCAGAACAGCAGCCTCCTCACTTGGGTCTTTAGACGACTTGAACTCTaGGTCCTCAAAGGAGACAGG +
Preference number: 2 (lower is better)
Translates to: LPHQAGVLQNSSLLTWVFRRLEL*VLKGDR
Trigger: CCTGTCTCCTTTGAGGACCCAGAGTTCAAGTCGTCT...AAAGACCCAAGTGAGGAGGCTGCTGTTCTGCAGTACGCCAGCCTGGTGGGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423243.6
3UTR-3UTR CCA 90 bp CCGGCAGAGGTGAACAGGTCAGTTTCTGAACAGCAGCATCCGCTCGGAGCACTTCCCACATTCATCGGGTaGATCCTGGTGTATGGCCAC +
Preference number: 2 (lower is better)
Translates to: PAEVNRSVSEQQHPLGALPTFIG*ILVYGH
Trigger: GTGGCCATACACCAGGATCCACCCGATGAATGTGGG...AAGTGCTCCGAGCGGATGCTGCTGTTCAGAAACTGACCTGTTCACCTCTGCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423243.6
3UTR-3UTR CCA 90 bp CCGGCAGAGGTGAACAGGTCAGTTTCTGAACAGCAGCATCCGCTCGGAGCACTTGCCATAGCCACAATCTaGCCCATTAGGGGGAGTCTC +
Preference number: 2 (lower is better)
Translates to: PAEVNRSVSEQQHPLGALAIATI*PIRGSL
Trigger: GAGACTCCCCCTAATGGGCCAGATTGTGGCTATGGC...AAGTGCTCCGAGCGGATGCTGCTGTTCAGAAACTGACCTGTTCACCTCTGCCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423243.6
3UTR-3UTR TCA 90 bp CTGCCCCACCAGGCTGGCGTACTGCAGAACAGCAGCCTCCTCACTTGGGTCTTTCTAATTTGTGGGTGGTaGCAGTTATTTCCCCACAGG +
Preference number: 2 (lower is better)
Translates to: LPHQAGVLQNSSLLTWVFLICGW*QLFPHR
Trigger: CCTGTGGGGAAATAACTGTCACCACCCACAAATTAG...AAAGACCCAAGTGAGGAGGCTGCTGTTCTGCAGTACGCCAGCCTGGTGGGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423243.6
3UTR-3UTR TCA 90 bp GCTTTGCTCACTACTCTAGCTCGGTTAGCAGAGTACGCAGCACCTTGGCAGGTGGAAGAGGGGATCAGCTaGCAAAGAGGGCACAAGAAA +
Preference number: 2 (lower is better)
Translates to: ALLTTLARLAEYAAPWQVEEGIS*QRGHKK
Trigger: TTTCTTGTGCCCTCTTTGTCAGCTGATCCCCTCTTC...CACCTGCCAAGGTGCTGCGTACTCTGCTAACCGAGCTAGAGTAGTGAGCAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
3UTR-3UTR CCA 90 bp CACCTGCAATCGGTCAGGTTCCGTACTGCGATCCTCATCCACTGCTTCTGGGTCCCATTGTGGAATCCATaGGCTCATCCTCACAACTTC +
Preference number: 2 (lower is better)
Translates to: HLQSVRFRTAILIHCFWVPLWNP*AHPHNF
Trigger: GAAGTTGTGAGGATGAGCCCATGGATTCCACAATGG...GACCCAGAAGCAGTGGATGAGGATCGCAGTACGGAACCTGACCGATTGCAGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423243.6
3UTR-3UTR TCA 90 bp CCGGCAGAGGTGAACAGGTCAGTTTCTGAACAGCAGCATCCGCTCGGAGCACTTTTTCCCCACAGGTACTaGATATGTATCCTGGCACAA +
Preference number: 2 (lower is better)
Translates to: PAEVNRSVSEQQHPLGALFPHRY*ICILAQ
Trigger: TTGTGCCAGGATACATATTCAGTACCTGTGGGGAAA...AAGTGCTCCGAGCGGATGCTGCTGTTCAGAAACTGACCTGTTCACCTCTGCCGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423243.6
3UTR-3UTR TCA 90 bp GCTTTGCTCACTACTCTAGCTCGGTTAGCAGAGTACGCAGCACCTTGGCAGGTGCTAATTTGTGGGTGGTaGCAGTTATTTCCCCACAGG +
Preference number: 2 (lower is better)
Translates to: ALLTTLARLAEYAAPWQVLICGW*QLFPHR
Trigger: CCTGTGGGGAAATAACTGTCACCACCCACAAATTAG...CACCTGCCAAGGTGCTGCGTACTCTGCTAACCGAGCTAGAGTAGTGAGCAAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
3UTR-3UTR TCA 90 bp GCTTTGCTCACTACTCTAGCTCGGTTAGCAGAGTACGCAGCACCTTGGCAGGTGCACACACACTCTGAATaGAGAAATGCGGCTGACTTG +
Preference number: 2 (lower is better)
Translates to: ALLTTLARLAEYAAPWQVHTHSE*RNAADL
Trigger: CAAGTCAGCCGCATTTCTTCATTCAGAGTGTGTGTG...CACCTGCCAAGGTGCTGCGTACTCTGCTAACCGAGCTAGAGTAGTGAGCAAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
3UTR-3UTR GCA 90 bp ATCAGAGAAAATGGCTTTGCTCACTACTCTAGCTCGGTTAGCAGAGTACGCAGCGAGGGGGCTGGCCTCTaGTCTGAGTTACTAAGGGTG +
Preference number: 2 (lower is better)
Translates to: IRENGFAHYSSSVSRVRSEGAGL*SELLRV
Trigger: CACCCTTAGTAACTCAGAGCAGAGGCCAGCCCCCTC...GCTGCGTACTCTGCTAACCGAGCTAGAGTAGTGAGCAAAGCCATTTTCTCTGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
3UTR CAA 90 bp CGATCCTCATCCACTGCTTCTGGGTCCTGGTTGAAACGGCAGTACTaGGAGTTTTCAAGTGAAGGCAGGCATTGCTCAATGGGTACCCAA +
Preference number: 2 (lower is better)
Translates to: RSSSTASGSWLKRQY*EFSSEGRHCSMGTQ
Trigger: TTGGGTACCCATTGAGCAATGCCTGCCTTCACTTGAAAACTCCAAGTACTGCCGTTTCAACCAGGACCCAGAAGCAGTGGATGAGGATCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423243.6
3UTR-3UTR TCA 90 bp TCTGAGTCTTTGCTGGTGTCAACCTACAATGCCACCCTCAAGGAAAGCACAGTGAAGAAGGGACATGTCTaGCTGTCCTCCTGTACCCAG +
Preference number: 2 (lower is better)
Translates to: SESLLVSTYNATLKESTVKKGHV*LSSCTQ
Trigger: CTGGGTACAGGAGGACAGTCAGACATGTCCCTTCTT...CACTGTGCTTTCCTTGAGGGTGGCATTGTAGGTTGACACCAGCAAAGACTCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
3UTR-3UTR CCA 90 bp CTCTCTTGTGAAACACCTGCAATCGGTCAGGTTCCGTACTGCGATCCTCATCCAATCAGCCCCTTTGCCTaGCTTAGGAACTGTGTGAAC +
Preference number: 2 (lower is better)
Translates to: LSCETPAIGQVPYCDPHPISPFA*LRNCVN
Trigger: GTTCACACAGTTCCTAAGCCAGGCAAAGGGGCTGAT...TGGATGAGGATCGCAGTACGGAACCTGACCGATTGCAGGTGTTTCACAAGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423243.6
3UTR-3UTR CCA 90 bp CCGGCAGAGGTGAACAGGTCAGTTTCTGAACAGCAGCATCCGCTCGGAGCACTTTCGAGTGATTTTGGCTaGTTGGATTTAGCCTTTGGT +
Preference number: 2 (lower is better)
Translates to: PAEVNRSVSEQQHPLGALSSDFG*LDLAFG
Trigger: ACCAAAGGCTAAATCCAACCAGCCAAAATCACTCGA...AAGTGCTCCGAGCGGATGCTGCTGTTCAGAAACTGACCTGTTCACCTCTGCCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423243.6
3UTR-3UTR TCA 90 bp CAGCACCTTGGCAGGTGTGACACACACACTCTGAATGAAGAAATGCGGCTGACTCTAATTTGTGGGTGGTaGCAGTTATTTCCCCACAGG +
Preference number: 2 (lower is better)
Translates to: QHLGRCDTHTLNEEMRLTLICGW*QLFPHR
Trigger: CCTGTGGGGAAATAACTGTCACCACCCACAAATTAG...AGTCAGCCGCATTTCTTCATTCAGAGTGTGTGTGTCACACCTGCCAAGGTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
3UTR-3UTR TCA 90 bp TCCCCACAGGTACTGAATATGTATCCTGGCACAAATCATCAGCACAACACAGGAGAACAGGTCAGTTTCTaGACAGCAGCATCCGCTCGG +
Preference number: 2 (lower is better)
Translates to: SPQVLNMYPGTNHQHNTGEQVSF*TAASAR
Trigger: CCGAGCGGATGCTGCTGTTCAGAAACTGACCTGTTC...TCCTGTGTTGTGCTGATGATTTGTGCCAGGATACATATTCAGTACCTGTGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423243.6
3UTR-3UTR CCA 90 bp TCTGAGTCTTTGCTGGTGTCAACCTACAATGCCACCCTCAAGGAAAGCACAGTGTGCCACCTTGACAGGTaGGCAAAGGACTCAGCAAAA +
Preference number: 2 (lower is better)
Translates to: SESLLVSTYNATLKESTVCHLDR*AKDSAK
Trigger: TTTTGCTGAGTCCTTTGCCCACCTGTCAAGGTGGCA...CACTGTGCTTTCCTTGAGGGTGGCATTGTAGGTTGACACCAGCAAAGACTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
3UTR-3UTR TCA 90 bp TCTGAGTCTTTGCTGGTGTCAACCTACAATGCCACCCTCAAGGAAAGCACAGTGCTAATTTGTGGGTGGTaGCAGTTATTTCCCCACAGG +
Preference number: 2 (lower is better)
Translates to: SESLLVSTYNATLKESTVLICGW*QLFPHR
Trigger: CCTGTGGGGAAATAACTGTCACCACCCACAAATTAG...CACTGTGCTTTCCTTGAGGGTGGCATTGTAGGTTGACACCAGCAAAGACTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
3UTR-3UTR TCA 90 bp CATGCTAATCACAAAGACAAATGGAGGGAAGATACAGTGATAACACCAAGTTGGCAGTGCCTGCCACCTTaGCAGGTGGGCAAAGGACTC +
Preference number: 2 (lower is better)
Translates to: HANHKDKWREDTVITPSWQCLPP*QVGKGL
Trigger: GAGTCCTTTGCCCACCTGTCAAGGTGGCAGGCACTG...CCAACTTGGTGTTATCACTGTATCTTCCCTCCATTTGTCTTTGTGATTAGCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
3UTR-3UTR TCA 90 bp TCCCCACAGGTACTGAATATGTATCCTGGCACAAATCATCAGCACAACACAGGAAAGAAGGGACATGTCTaGCTGTCCTCCTGTACCCAG +
Preference number: 2 (lower is better)
Translates to: SPQVLNMYPGTNHQHNTGKKGHV*LSSCTQ
Trigger: CTGGGTACAGGAGGACAGTCAGACATGTCCCTTCTT...TCCTGTGTTGTGCTGATGATTTGTGCCAGGATACATATTCAGTACCTGTGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
3UTR-3UTR TCA 90 bp ATCAGAGAAAATGGCTTTGCTCACTACTCTAGCTCGGTTAGCAGAGTACGCAGCGAAGAGGGGATCAGCTaGCAAAGAGGGCACAAGAAA +
Preference number: 2 (lower is better)
Translates to: IRENGFAHYSSSVSRVRSEEGIS*QRGHKK
Trigger: TTTCTTGTGCCCTCTTTGTCAGCTGATCCCCTCTTC...GCTGCGTACTCTGCTAACCGAGCTAGAGTAGTGAGCAAAGCCATTTTCTCTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
3UTR-3UTR TCA 90 bp CACCTGCAATCGGTCAGGTTCCGTACTGCGATCCTCATCCACTGCTTCTGGGTCTTTCATCTTGGGACATaGATGAATGTAGAAACCCAT +
Preference number: 2 (lower is better)
Translates to: HLQSVRFRTAILIHCFWVFHLGT*MNVETH
Trigger: ATGGGTTTCTACATTCATTCATGTCCCAAGATGAAA...GACCCAGAAGCAGTGGATGAGGATCGCAGTACGGAACCTGACCGATTGCAGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423243.6
3UTR-3UTR GCA 90 bp CCGGCAGAGGTGAACAGGTCAGTTTCTGAACAGCAGCATCCGCTCGGAGCACTTAATTTGAGCGTATCTTaGTCTAGAAAGAATCCTCCA +
Preference number: 2 (lower is better)
Translates to: PAEVNRSVSEQQHPLGALNLSVS*SRKNPP
Trigger: TGGAGGATTCTTTCTAGAGCAAGATACGCTCAAATT...AAGTGCTCCGAGCGGATGCTGCTGTTCAGAAACTGACCTGTTCACCTCTGCCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423243.6
3UTR-3UTR CCA 90 bp CACCTGCAATCGGTCAGGTTCCGTACTGCGATCCTCATCCACTGCTTCTGGGTCACTGAATATGTATCCTaGCACAAATCATCAGCACAA +
Preference number: 2 (lower is better)
Translates to: HLQSVRFRTAILIHCFWVTEYVS*HKSSAQ
Trigger: TTGTGCTGATGATTTGTGCCAGGATACATATTCAGT...GACCCAGAAGCAGTGGATGAGGATCGCAGTACGGAACCTGACCGATTGCAGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423243.6
3UTR-3UTR CCA 90 bp ATCAGAGAAAATGGCTTTGCTCACTACTCTAGCTCGGTTAGCAGAGTACGCAGCTGCCACCTTGACAGGTaGGCAAAGGACTCAGCAAAA +
Preference number: 2 (lower is better)
Translates to: IRENGFAHYSSSVSRVRSCHLDR*AKDSAK
Trigger: TTTTGCTGAGTCCTTTGCCCACCTGTCAAGGTGGCA...GCTGCGTACTCTGCTAACCGAGCTAGAGTAGTGAGCAAAGCCATTTTCTCTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
3UTR-3UTR TCA 90 bp CATGCTAATCACAAAGACAAATGGAGGGAAGATACAGTGATAACACCAAGTTGGGGCTGGCCTCTGCTCTaGGTTACTAAGGGTGGCAGA +
Preference number: 2 (lower is better)
Translates to: HANHKDKWREDTVITPSWGWPLL*VTKGGR
Trigger: TCTGCCACCCTTAGTAACTCAGAGCAGAGGCCAGCC...CCAACTTGGTGTTATCACTGTATCTTCCCTCCATTTGTCTTTGTGATTAGCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
3UTR-3UTR TCA 90 bp CTCTCTTGTGAAACACCTGCAATCGGTCAGGTTCCGTACTGCGATCCTCATCCATGCAAAGGAATCTTGTaGACTCAGTCTTCCCACATT +
Preference number: 2 (lower is better)
Translates to: LSCETPAIGQVPYCDPHPCKGIL*TQSSHI
Trigger: AATGTGGGAAGACTGAGTTCACAAGATTCCTTTGCA...TGGATGAGGATCGCAGTACGGAACCTGACCGATTGCAGGTGTTTCACAAGAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423243.6
3UTR-3UTR GCA 90 bp CTCTCTTGTGAAACACCTGCAATCGGTCAGGTTCCGTACTGCGATCCTCATCCATCTCCAGCTGGGTTCTaGTGCATTAGTTTTAACCTT +
Preference number: 2 (lower is better)
Translates to: LSCETPAIGQVPYCDPHPSPAGF*CISFNL
Trigger: AAGGTTAAAACTAATGCAGCAGAACCCAGCTGGAGA...TGGATGAGGATCGCAGTACGGAACCTGACCGATTGCAGGTGTTTCACAAGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423243.6
3UTR CAA 90 bp CTCAGTCTTCCCACATTCATCGGGTGGATCCTGGTGTATGGCCACTaGATACTTGACATACAAAGAAAAGGACTGGCTGAAAGACGACTT +
Preference number: 2 (lower is better)
Translates to: LSLPTFIGWILVYGH*ILDIQRKGLAERRL
Trigger: AAGTCGTCTTTCAGCCAGTCCTTTTCTTTGTATGTCAAGTATCAAGTGGCCATACACCAGGATCCACCCGATGAATGTGGGAAGACTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423243.6
3UTR-3UTR TCA 90 bp ATCAGAGAAAATGGCTTTGCTCACTACTCTAGCTCGGTTAGCAGAGTACGCAGCTTTCCCCACAGGTACTaGATATGTATCCTGGCACAA +
Preference number: 2 (lower is better)
Translates to: IRENGFAHYSSSVSRVRSFPHRY*ICILAQ
Trigger: TTGTGCCAGGATACATATTCAGTACCTGTGGGGAAA...GCTGCGTACTCTGCTAACCGAGCTAGAGTAGTGAGCAAAGCCATTTTCTCTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
3UTR-3UTR TCA 90 bp GATCAATACACTAGCTATTCTCAAACCAACATAATGCATGAATACAGCAGCCAACAGTGCCTGCCACCTTaGCAGGTGGGCAAAGGACTC +
Preference number: 2 (lower is better)
Translates to: DQYTSYSQTNIMHEYSSQQCLPP*QVGKGL
Trigger: GAGTCCTTTGCCCACCTGTCAAGGTGGCAGGCACTG...TTGGCTGCTGTATTCATGCATTATGTTGGTTTGAGAATAGCTAGTGTATTGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
3UTR-3UTR TCA 90 bp TCTGAGTCTTTGCTGGTGTCAACCTACAATGCCACCCTCAAGGAAAGCACAGTGAGGCTCTATAGATTCTaGAGGCAGTTCCAAGTAAGT +
Preference number: 2 (lower is better)
Translates to: SESLLVSTYNATLKESTVRLYRF*RQFQVS
Trigger: ACTTACTTGGAACTGCCTTCAGAATCTATAGAGCCT...CACTGTGCTTTCCTTGAGGGTGGCATTGTAGGTTGACACCAGCAAAGACTCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
3UTR-3UTR CCA 90 bp GCTTTGCTCACTACTCTAGCTCGGTTAGCAGAGTACGCAGCACCTTGGCAGGTGAAAATGTCTAATTTGTaGGTGGTGACAGTTATTTCC +
Preference number: 2 (lower is better)
Translates to: ALLTTLARLAEYAAPWQVKMSNL*VVTVIS
Trigger: GGAAATAACTGTCACCACCCACAAATTAGACATTTT...CACCTGCCAAGGTGCTGCGTACTCTGCTAACCGAGCTAGAGTAGTGAGCAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
3UTR CAA 90 bp CCAGTTTATTTATCAATGCAAAGTCACCCGCAACAGCATCATCCATaGTGGAATCCATGGGCTCATCCTCACAACTTCCTTTGGGAACCT +
Preference number: 2 (lower is better)
Translates to: PVYLSMQSHPQQHHP*WNPWAHPHNFLWEP
Trigger: AGGTTCCCAAAGGAAGTTGTGAGGATGAGCCCATGGATTCCACAATGGATGATGCTGTTGCGGGTGACTTTGCATTGATAAATAAACTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423243.6
3UTR-3UTR TCA 90 bp AGTAGAAGGATCTCCAATGCTCAAGTCACTCTGAGTCTTTGCTGGTGTCAACCTTTTCCCCACAGGTACTaGATATGTATCCTGGCACAA +
Preference number: 2 (lower is better)
Translates to: SRRISNAQVTLSLCWCQPFPHRY*ICILAQ
Trigger: TTGTGCCAGGATACATATTCAGTACCTGTGGGGAAA...AGGTTGACACCAGCAAAGACTCAGAGTGACTTGAGCATTGGAGATCCTTCTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
3UTR-3UTR TCA 90 bp ATCAGAGAAAATGGCTTTGCTCACTACTCTAGCTCGGTTAGCAGAGTACGCAGCGCAGCAATTTCACATTaGACACTGAGTTGTAACAGC +
Preference number: 2 (lower is better)
Translates to: IRENGFAHYSSSVSRVRSAAISH*TLSCNS
Trigger: GCTGTTACAACTCAGTGTTCAATGTGAAATTGCTGC...GCTGCGTACTCTGCTAACCGAGCTAGAGTAGTGAGCAAAGCCATTTTCTCTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
3UTR-3UTR TCA 90 bp ATCAGAGAAAATGGCTTTGCTCACTACTCTAGCTCGGTTAGCAGAGTACGCAGCGAACAGAGGTCGGAATaGTTCCTTCTTCAATGTGAT +
Preference number: 2 (lower is better)
Translates to: IRENGFAHYSSSVSRVRSEQRSE*FLLQCD
Trigger: ATCACATTGAAGAAGGAATCATTCCGACCTCTGTTC...GCTGCGTACTCTGCTAACCGAGCTAGAGTAGTGAGCAAAGCCATTTTCTCTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
3UTR-3UTR TCA 90 bp GATCAATACACTAGCTATTCTCAAACCAACATAATGCATGAATACAGCAGCCAAGGCTGGCCTCTGCTCTaGGTTACTAAGGGTGGCAGA +
Preference number: 2 (lower is better)
Translates to: DQYTSYSQTNIMHEYSSQGWPLL*VTKGGR
Trigger: TCTGCCACCCTTAGTAACTCAGAGCAGAGGCCAGCC...TTGGCTGCTGTATTCATGCATTATGTTGGTTTGAGAATAGCTAGTGTATTGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
3UTR-3UTR TCA 90 bp ATTTTACATGCTAATCACAAAGACAAATGGAGGGAAGATACAGTGATAACACCACAGTGCCTGCCACCTTaGCAGGTGGGCAAAGGACTC +
Preference number: 2 (lower is better)
Translates to: ILHANHKDKWREDTVITPQCLPP*QVGKGL
Trigger: GAGTCCTTTGCCCACCTGTCAAGGTGGCAGGCACTG...TGGTGTTATCACTGTATCTTCCCTCCATTTGTCTTTGTGATTAGCATGTAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
3UTR-3UTR TCA 90 bp TCCCCACAGGTACTGAATATGTATCCTGGCACAAATCATCAGCACAACACAGGACTTGGAGTTTTCAAGTaGAGGCAGGCATTGCTCAAT +
Preference number: 2 (lower is better)
Translates to: SPQVLNMYPGTNHQHNTGLGVFK*RQALLN
Trigger: ATTGAGCAATGCCTGCCTTCACTTGAAAACTCCAAG...TCCTGTGTTGTGCTGATGATTTGTGCCAGGATACATATTCAGTACCTGTGGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423243.6
3UTR-3UTR GCA 90 bp CAGCACCTTGGCAGGTGTGACACACACACTCTGAATGAAGAAATGCGGCTGACTAATTTGAGCGTATCTTaGTCTAGAAAGAATCCTCCA +
Preference number: 2 (lower is better)
Translates to: QHLGRCDTHTLNEEMRLTNLSVS*SRKNPP
Trigger: TGGAGGATTCTTTCTAGAGCAAGATACGCTCAAATT...AGTCAGCCGCATTTCTTCATTCAGAGTGTGTGTGTCACACCTGCCAAGGTGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
3UTR-3UTR GCA 90 bp CTCCAATGCTCAAGTCACTCTGAGTCTTTGCTGGTGTCAACCTACAATGCCACCCTTACGAGACTACTTTaGAGGTCAAAATCCCAGAAA +
Preference number: 2 (lower is better)
Translates to: LQCSSHSESLLVSTYNATLTRLL*RSKSQK
Trigger: TTTCTGGGATTTTGACCTGCAAAGTAGTCTCGTAAG...GGTGGCATTGTAGGTTGACACCAGCAAAGACTCAGAGTGACTTGAGCATTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
3UTR-3UTR GCA 90 bp TCTGAGTCTTTGCTGGTGTCAACCTACAATGCCACCCTCAAGGAAAGCACAGTGGTACCAGCCCTACCCTaGTTATTTTTAATAATGCAG +
Preference number: 2 (lower is better)
Translates to: SESLLVSTYNATLKESTVVPALP*LFLIMQ
Trigger: CTGCATTATTAAAAATAAGCAGGGTAGGGCTGGTAC...CACTGTGCTTTCCTTGAGGGTGGCATTGTAGGTTGACACCAGCAAAGACTCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
3UTR-3UTR GCA 90 bp AAACGGCAGTACTTGGAGTTTTCAAGTGAAGGCAGGCATTGCTCAATGGGTACCCCAGCTGGGTTCTGCTaGATTAGTTTTAACCTTTTC +
Preference number: 2 (lower is better)
Translates to: KRQYLEFSSEGRHCSMGTPAGFC*ISFNLF
Trigger: GAAAAGGTTAAAACTAATGCAGCAGAACCCAGCTGG...GGTACCCATTGAGCAATGCCTGCCTTCACTTGAAAACTCCAAGTACTGCCGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000423243.6
3UTR-3UTR CCA 90 bp CTCCAATGCTCAAGTCACTCTGAGTCTTTGCTGGTGTCAACCTACAATGCCACCGATAAATCCCAATTATaGGGGCTAGGTCATAATGCA +
Preference number: 2 (lower is better)
Translates to: LQCSSHSESLLVSTYNATDKSQL*GLGHNA
Trigger: TGCATTATGACCTAGCCCCCATAATTGGGATTTATC...GGTGGCATTGTAGGTTGACACCAGCAAAGACTCAGAGTGACTTGAGCATTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
3UTR-3UTR CCA 90 bp TCTGAGTCTTTGCTGGTGTCAACCTACAATGCCACCCTCAAGGAAAGCACAGTGACTGTCCTGAACAAATaGATACCTGATGCTAACACA +
Preference number: 2 (lower is better)
Translates to: SESLLVSTYNATLKESTVTVLNK*IPDANT
Trigger: TGTGTTAGCATCAGGTATCCATTTGTTCAGGACAGT...CACTGTGCTTTCCTTGAGGGTGGCATTGTAGGTTGACACCAGCAAAGACTCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
3UTR-3UTR TCA 90 bp GGGTCCTCAAAGGAGACAGGTACTAACCTCACCTCTAACTTGTGTGATGCATTCACAAACAGGAGAATTTaGGCGTATCTTGCTCTAGAA +
Preference number: 2 (lower is better)
Translates to: GSSKETGTNLTSNLCDAFTNRRI*AYLALE
Trigger: TTCTAGAGCAAGATACGCTCAAATTCTCCTGTTTGT...GAATGCATCACACAAGTTAGAGGTGAGGTTAGTACCTGTCTCCTTTGAGGACCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423243.6
3UTR-3UTR TCA 90 bp CTCCAATGCTCAAGTCACTCTGAGTCTTTGCTGGTGTCAACCTACAATGCCACCTTTCACATTGAACACTaGGTTGTAACAGCACAGTTT +
Preference number: 2 (lower is better)
Translates to: LQCSSHSESLLVSTYNATFHIEH*VVTAQF
Trigger: AAACTGTGCTGTTACAACTCAGTGTTCAATGTGAAA...GGTGGCATTGTAGGTTGACACCAGCAAAGACTCAGAGTGACTTGAGCATTGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
3UTR-3UTR TCA 90 bp AGTAGAAGGATCTCCAATGCTCAAGTCACTCTGAGTCTTTGCTGGTGTCAACCTGCAGCAATTTCACATTaGACACTGAGTTGTAACAGC +
Preference number: 2 (lower is better)
Translates to: SRRISNAQVTLSLCWCQPAAISH*TLSCNS
Trigger: GCTGTTACAACTCAGTGTTCAATGTGAAATTGCTGC...AGGTTGACACCAGCAAAGACTCAGAGTGACTTGAGCATTGGAGATCCTTCTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
3UTR-3UTR TCA 90 bp TCCCCACAGGTACTGAATATGTATCCTGGCACAAATCATCAGCACAACACAGGAGCAGCAATTTCACATTaGACACTGAGTTGTAACAGC +
Preference number: 2 (lower is better)
Translates to: SPQVLNMYPGTNHQHNTGAAISH*TLSCNS
Trigger: GCTGTTACAACTCAGTGTTCAATGTGAAATTGCTGC...TCCTGTGTTGTGCTGATGATTTGTGCCAGGATACATATTCAGTACCTGTGGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
3UTR-3UTR TCA 90 bp CATGCTAATCACAAAGACAAATGGAGGGAAGATACAGTGATAACACCAAGTTGGGAAGAGGGGATCAGCTaGCAAAGAGGGCACAAGAAA +
Preference number: 2 (lower is better)
Translates to: HANHKDKWREDTVITPSWEEGIS*QRGHKK
Trigger: TTTCTTGTGCCCTCTTTGTCAGCTGATCCCCTCTTC...CCAACTTGGTGTTATCACTGTATCTTCCCTCCATTTGTCTTTGTGATTAGCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
3UTR-3UTR TCA 90 bp TCTGAGTCTTTGCTGGTGTCAACCTACAATGCCACCCTCAAGGAAAGCACAGTGAGTTTTCTCTTCATCTaGTATTCAAGGGTTGTGATC +
Preference number: 2 (lower is better)
Translates to: SESLLVSTYNATLKESTVSFLFI*YSRVVI
Trigger: GATCACAACCCTTGAATATCAGATGAAGAGAAAACT...CACTGTGCTTTCCTTGAGGGTGGCATTGTAGGTTGACACCAGCAAAGACTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
3UTR-3UTR GCA 90 bp AAACGGCAGTACTTGGAGTTTTCAAGTGAAGGCAGGCATTGCTCAATGGGTACCCAGTTTATTTATCAATaGAAAGTCACCCGCAACAGC +
Preference number: 2 (lower is better)
Translates to: KRQYLEFSSEGRHCSMGTQFIYQ*KVTRNS
Trigger: GCTGTTGCGGGTGACTTTGCATTGATAAATAAACTG...GGTACCCATTGAGCAATGCCTGCCTTCACTTGAAAACTCCAAGTACTGCCGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423243.6
3UTR-3UTR CCA 90 bp TCTGAGTCTTTGCTGGTGTCAACCTACAATGCCACCCTCAAGGAAAGCACAGTGACTGAATATGTATCCTaGCACAAATCATCAGCACAA +
Preference number: 2 (lower is better)
Translates to: SESLLVSTYNATLKESTVTEYVS*HKSSAQ
Trigger: TTGTGCTGATGATTTGTGCCAGGATACATATTCAGT...CACTGTGCTTTCCTTGAGGGTGGCATTGTAGGTTGACACCAGCAAAGACTCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
3UTR-3UTR CCA 90 bp TCTCAGGGCACAGCAAATCAGAAGGTCTATACTGACCCTTATATTTCATCTTGGCAGCATCATCCATTGTaGAATCCATGGGCTCATCCT +
Preference number: 2 (lower is better)
Translates to: SQGTANQKVYTDPYISSWQHHPL*NPWAHP
Trigger: AGGATGAGCCCATGGATTCCACAATGGATGATGCTG...CCAAGATGAAATATAAGGGTCAGTATAGACCTTCTGATTTGCTGTGCCCTGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423243.6
3UTR-3UTR TCA 90 bp TCCCCACAGGTACTGAATATGTATCCTGGCACAAATCATCAGCACAACACAGGAACAAACAGGAGAATTTaGGCGTATCTTGCTCTAGAA +
Preference number: 2 (lower is better)
Translates to: SPQVLNMYPGTNHQHNTGTNRRI*AYLALE
Trigger: TTCTAGAGCAAGATACGCTCAAATTCTCCTGTTTGT...TCCTGTGTTGTGCTGATGATTTGTGCCAGGATACATATTCAGTACCTGTGGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000423243.6
ENST00000540606.6
3UTR-3UTR TCA 90 bp GATCAATACACTAGCTATTCTCAAACCAACATAATGCATGAATACAGCAGCCAAAAGAAGGGACATGTCTaGCTGTCCTCCTGTACCCAG +
Preference number: 2 (lower is better)
Translates to: DQYTSYSQTNIMHEYSSQKKGHV*LSSCTQ
Trigger: CTGGGTACAGGAGGACAGTCAGACATGTCCCTTCTT...TTGGCTGCTGTATTCATGCATTATGTTGGTTTGAGAATAGCTAGTGTATTGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
3UTR-3UTR GCA 90 bp AGTAGAAGGATCTCCAATGCTCAAGTCACTCTGAGTCTTTGCTGGTGTCAACCTGTACCAGCCCTACCCTaGTTATTTTTAATAATGCAG +
Preference number: 2 (lower is better)
Translates to: SRRISNAQVTLSLCWCQPVPALP*LFLIMQ
Trigger: CTGCATTATTAAAAATAAGCAGGGTAGGGCTGGTAC...AGGTTGACACCAGCAAAGACTCAGAGTGACTTGAGCATTGGAGATCCTTCTACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
3UTR-3UTR CCA 90 bp ATCAGAGAAAATGGCTTTGCTCACTACTCTAGCTCGGTTAGCAGAGTACGCAGCACTGAATATGTATCCTaGCACAAATCATCAGCACAA +
Preference number: 2 (lower is better)
Translates to: IRENGFAHYSSSVSRVRSTEYVS*HKSSAQ
Trigger: TTGTGCTGATGATTTGTGCCAGGATACATATTCAGT...GCTGCGTACTCTGCTAACCGAGCTAGAGTAGTGAGCAAAGCCATTTTCTCTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
3UTR-3UTR CCA 90 bp TGGGTACCCAAACATATGTCTCAGGGCACAGCAAATCAGAAGGTCTATACTGACGATAAATCCCAATTATaGGGGCTAGGTCATAATGCA +
Preference number: 2 (lower is better)
Translates to: WVPKHMSQGTANQKVYTDDKSQL*GLGHNA
Trigger: TGCATTATGACCTAGCCCCCATAATTGGGATTTATC...GTCAGTATAGACCTTCTGATTTGCTGTGCCCTGAGACATATGTTTGGGTACCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423243.6
3UTR-3UTR CCA 90 bp TCCCCACAGGTACTGAATATGTATCCTGGCACAAATCATCAGCACAACACAGGAACTGTCCTGAACAAATaGATACCTGATGCTAACACA +
Preference number: 2 (lower is better)
Translates to: SPQVLNMYPGTNHQHNTGTVLNK*IPDANT
Trigger: TGTGTTAGCATCAGGTATCCATTTGTTCAGGACAGT...TCCTGTGTTGTGCTGATGATTTGTGCCAGGATACATATTCAGTACCTGTGGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
3UTR-3UTR TCA 90 bp ATTTTACATGCTAATCACAAAGACAAATGGAGGGAAGATACAGTGATAACACCAAAGAAGGGACATGTCTaGCTGTCCTCCTGTACCCAG +
Preference number: 2 (lower is better)
Translates to: ILHANHKDKWREDTVITPKKGHV*LSSCTQ
Trigger: CTGGGTACAGGAGGACAGTCAGACATGTCCCTTCTT...TGGTGTTATCACTGTATCTTCCCTCCATTTGTCTTTGTGATTAGCATGTAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
3UTR-3UTR GCA 90 bp AGTAGAAGGATCTCCAATGCTCAAGTCACTCTGAGTCTTTGCTGGTGTCAACCTAATTTGAGCGTATCTTaGTCTAGAAAGAATCCTCCA +
Preference number: 2 (lower is better)
Translates to: SRRISNAQVTLSLCWCQPNLSVS*SRKNPP
Trigger: TGGAGGATTCTTTCTAGAGCAAGATACGCTCAAATT...AGGTTGACACCAGCAAAGACTCAGAGTGACTTGAGCATTGGAGATCCTTCTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
3UTR-3UTR GCA 90 bp TCCCCACAGGTACTGAATATGTATCCTGGCACAAATCATCAGCACAACACAGGAAATTTGAGCGTATCTTaGTCTAGAAAGAATCCTCCA +
Preference number: 2 (lower is better)
Translates to: SPQVLNMYPGTNHQHNTGNLSVS*SRKNPP
Trigger: TGGAGGATTCTTTCTAGAGCAAGATACGCTCAAATT...TCCTGTGTTGTGCTGATGATTTGTGCCAGGATACATATTCAGTACCTGTGGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000423243.6
ENST00000540606.6
3UTR-3UTR CCA 90 bp AGTAGAAGGATCTCCAATGCTCAAGTCACTCTGAGTCTTTGCTGGTGTCAACCTTCAAAGGACAAGAAATaGATTGTTCTAGCTCTTGTC +
Preference number: 2 (lower is better)
Translates to: SRRISNAQVTLSLCWCQPSKDKK*IVLALV
Trigger: GACAAGAGCTAGAACAATCCATTTCTTGTCCTTTGA...AGGTTGACACCAGCAAAGACTCAGAGTGACTTGAGCATTGGAGATCCTTCTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
3UTR-3UTR CCA 90 bp TCCCCACAGGTACTGAATATGTATCCTGGCACAAATCATCAGCACAACACAGGATCAAAGGACAAGAAATaGATTGTTCTAGCTCTTGTC +
Preference number: 2 (lower is better)
Translates to: SPQVLNMYPGTNHQHNTGSKDKK*IVLALV
Trigger: GACAAGAGCTAGAACAATCCATTTCTTGTCCTTTGA...TCCTGTGTTGTGCTGATGATTTGTGCCAGGATACATATTCAGTACCTGTGGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
3UTR-3UTR TCA 90 bp ATTTTACATGCTAATCACAAAGACAAATGGAGGGAAGATACAGTGATAACACCAGAAGAGGGGATCAGCTaGCAAAGAGGGCACAAGAAA +
Preference number: 2 (lower is better)
Translates to: ILHANHKDKWREDTVITPEEGIS*QRGHKK
Trigger: TTTCTTGTGCCCTCTTTGTCAGCTGATCCCCTCTTC...TGGTGTTATCACTGTATCTTCCCTCCATTTGTCTTTGTGATTAGCATGTAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
3UTR-3UTR CCA 90 bp ATTTTACATGCTAATCACAAAGACAAATGGAGGGAAGATACAGTGATAACACCATGCCACCTTGACAGGTaGGCAAAGGACTCAGCAAAA +
Preference number: 2 (lower is better)
Translates to: ILHANHKDKWREDTVITPCHLDR*AKDSAK
Trigger: TTTTGCTGAGTCCTTTGCCCACCTGTCAAGGTGGCA...TGGTGTTATCACTGTATCTTCCCTCCATTTGTCTTTGTGATTAGCATGTAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
3UTR-3UTR CCA 90 bp AGTAGAAGGATCTCCAATGCTCAAGTCACTCTGAGTCTTTGCTGGTGTCAACCTAATCACAAAGACAAATaGAGGGAAGATACAGTGATA +
Preference number: 2 (lower is better)
Translates to: SRRISNAQVTLSLCWCQPNHKDK*REDTVI
Trigger: TATCACTGTATCTTCCCTCCATTTGTCTTTGTGATT...AGGTTGACACCAGCAAAGACTCAGAGTGACTTGAGCATTGGAGATCCTTCTACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
3UTR-3UTR CCA 90 bp TCTCAGGGCACAGCAAATCAGAAGGTCTATACTGACCCTTATATTTCATCTTGGTACAAAGAAAAGGACTaGCTGAAAGACGACTTGAAC +
Preference number: 2 (lower is better)
Translates to: SQGTANQKVYTDPYISSWYKEKD*LKDDLN
Trigger: GTTCAAGTCGTCTTTCAGCCAGTCCTTTTCTTTGTA...CCAAGATGAAATATAAGGGTCAGTATAGACCTTCTGATTTGCTGTGCCCTGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423243.6
3UTR-3UTR TCA 90 bp GATCAATACACTAGCTATTCTCAAACCAACATAATGCATGAATACAGCAGCCAATTTCCCCACAGGTACTaGATATGTATCCTGGCACAA +
Preference number: 2 (lower is better)
Translates to: DQYTSYSQTNIMHEYSSQFPHRY*ICILAQ
Trigger: TTGTGCCAGGATACATATTCAGTACCTGTGGGGAAA...TTGGCTGCTGTATTCATGCATTATGTTGGTTTGAGAATAGCTAGTGTATTGATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
3UTR-3UTR TCA 90 bp CATGCTAATCACAAAGACAAATGGAGGGAAGATACAGTGATAACACCAAGTTGGACAAACAGGAGAATTTaGGCGTATCTTGCTCTAGAA +
Preference number: 2 (lower is better)
Translates to: HANHKDKWREDTVITPSWTNRRI*AYLALE
Trigger: TTCTAGAGCAAGATACGCTCAAATTCTCCTGTTTGT...CCAACTTGGTGTTATCACTGTATCTTCCCTCCATTTGTCTTTGTGATTAGCATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
3UTR-3UTR TCA 90 bp ATTTTACATGCTAATCACAAAGACAAATGGAGGGAAGATACAGTGATAACACCACACACACACTCTGAATaGAGAAATGCGGCTGACTTG +
Preference number: 2 (lower is better)
Translates to: ILHANHKDKWREDTVITPHTHSE*RNAADL
Trigger: CAAGTCAGCCGCATTTCTTCATTCAGAGTGTGTGTG...TGGTGTTATCACTGTATCTTCCCTCCATTTGTCTTTGTGATTAGCATGTAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
3UTR-3UTR GCA 90 bp CATGCTAATCACAAAGACAAATGGAGGGAAGATACAGTGATAACACCAAGTTGGCTTACGAGACTACTTTaGAGGTCAAAATCCCAGAAA +
Preference number: 2 (lower is better)
Translates to: HANHKDKWREDTVITPSWLTRLL*RSKSQK
Trigger: TTTCTGGGATTTTGACCTGCAAAGTAGTCTCGTAAG...CCAACTTGGTGTTATCACTGTATCTTCCCTCCATTTGTCTTTGTGATTAGCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
3UTR-3UTR CCA 90 bp CATGCTAATCACAAAGACAAATGGAGGGAAGATACAGTGATAACACCAAGTTGGGATAAATCCCAATTATaGGGGCTAGGTCATAATGCA +
Preference number: 2 (lower is better)
Translates to: HANHKDKWREDTVITPSWDKSQL*GLGHNA
Trigger: TGCATTATGACCTAGCCCCCATAATTGGGATTTATC...CCAACTTGGTGTTATCACTGTATCTTCCCTCCATTTGTCTTTGTGATTAGCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
3UTR-3UTR TCA 90 bp ATTTTACATGCTAATCACAAAGACAAATGGAGGGAAGATACAGTGATAACACCATTTCCCCACAGGTACTaGATATGTATCCTGGCACAA +
Preference number: 2 (lower is better)
Translates to: ILHANHKDKWREDTVITPFPHRY*ICILAQ
Trigger: TTGTGCCAGGATACATATTCAGTACCTGTGGGGAAA...TGGTGTTATCACTGTATCTTCCCTCCATTTGTCTTTGTGATTAGCATGTAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
3UTR-3UTR TCA 90 bp GATCAATACACTAGCTATTCTCAAACCAACATAATGCATGAATACAGCAGCCAAACAAACAGGAGAATTTaGGCGTATCTTGCTCTAGAA +
Preference number: 2 (lower is better)
Translates to: DQYTSYSQTNIMHEYSSQTNRRI*AYLALE
Trigger: TTCTAGAGCAAGATACGCTCAAATTCTCCTGTTTGT...TTGGCTGCTGTATTCATGCATTATGTTGGTTTGAGAATAGCTAGTGTATTGATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
3UTR-3UTR TCA 90 bp ATTTTACATGCTAATCACAAAGACAAATGGAGGGAAGATACAGTGATAACACCAGCAGCAATTTCACATTaGACACTGAGTTGTAACAGC +
Preference number: 2 (lower is better)
Translates to: ILHANHKDKWREDTVITPAAISH*TLSCNS
Trigger: GCTGTTACAACTCAGTGTTCAATGTGAAATTGCTGC...TGGTGTTATCACTGTATCTTCCCTCCATTTGTCTTTGTGATTAGCATGTAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
3UTR-3UTR TCA 90 bp ATTTTACATGCTAATCACAAAGACAAATGGAGGGAAGATACAGTGATAACACCAGAACAGAGGTCGGAATaGTTCCTTCTTCAATGTGAT +
Preference number: 2 (lower is better)
Translates to: ILHANHKDKWREDTVITPEQRSE*FLLQCD
Trigger: ATCACATTGAAGAAGGAATCATTCCGACCTCTGTTC...TGGTGTTATCACTGTATCTTCCCTCCATTTGTCTTTGTGATTAGCATGTAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
3UTR-3UTR GCA 90 bp GATCAATACACTAGCTATTCTCAAACCAACATAATGCATGAATACAGCAGCCAAGTACCAGCCCTACCCTaGTTATTTTTAATAATGCAG +
Preference number: 2 (lower is better)
Translates to: DQYTSYSQTNIMHEYSSQVPALP*LFLIMQ
Trigger: CTGCATTATTAAAAATAAGCAGGGTAGGGCTGGTAC...TTGGCTGCTGTATTCATGCATTATGTTGGTTTGAGAATAGCTAGTGTATTGATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
3UTR-3UTR CCA 90 bp GATCAATACACTAGCTATTCTCAAACCAACATAATGCATGAATACAGCAGCCAAGATAAATCCCAATTATaGGGGCTAGGTCATAATGCA +
Preference number: 2 (lower is better)
Translates to: DQYTSYSQTNIMHEYSSQDKSQL*GLGHNA
Trigger: TGCATTATGACCTAGCCCCCATAATTGGGATTTATC...TTGGCTGCTGTATTCATGCATTATGTTGGTTTGAGAATAGCTAGTGTATTGATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
3UTR-3UTR TCA 90 bp ATTTTACATGCTAATCACAAAGACAAATGGAGGGAAGATACAGTGATAACACCAACAAACAGGAGAATTTaGGCGTATCTTGCTCTAGAA +
Preference number: 2 (lower is better)
Translates to: ILHANHKDKWREDTVITPTNRRI*AYLALE
Trigger: TTCTAGAGCAAGATACGCTCAAATTCTCCTGTTTGT...TGGTGTTATCACTGTATCTTCCCTCCATTTGTCTTTGTGATTAGCATGTAAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
3UTR-3UTR CCA 90 bp GATCAATACACTAGCTATTCTCAAACCAACATAATGCATGAATACAGCAGCCAAACTGAATATGTATCCTaGCACAAATCATCAGCACAA +
Preference number: 2 (lower is better)
Translates to: DQYTSYSQTNIMHEYSSQTEYVS*HKSSAQ
Trigger: TTGTGCTGATGATTTGTGCCAGGATACATATTCAGT...TTGGCTGCTGTATTCATGCATTATGTTGGTTTGAGAATAGCTAGTGTATTGATC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
3UTR-3UTR CCA 90 bp ATTTTACATGCTAATCACAAAGACAAATGGAGGGAAGATACAGTGATAACACCAACTGTCCTGAACAAATaGATACCTGATGCTAACACA +
Preference number: 2 (lower is better)
Translates to: ILHANHKDKWREDTVITPTVLNK*IPDANT
Trigger: TGTGTTAGCATCAGGTATCCATTTGTTCAGGACAGT...TGGTGTTATCACTGTATCTTCCCTCCATTTGTCTTTGTGATTAGCATGTAAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
3UTR-3UTR CCA 90 bp GATCAATACACTAGCTATTCTCAAACCAACATAATGCATGAATACAGCAGCCAATCAAAGGACAAGAAATaGATTGTTCTAGCTCTTGTC +
Preference number: 2 (lower is better)
Translates to: DQYTSYSQTNIMHEYSSQSKDKK*IVLALV
Trigger: GACAAGAGCTAGAACAATCCATTTCTTGTCCTTTGA...TTGGCTGCTGTATTCATGCATTATGTTGGTTTGAGAATAGCTAGTGTATTGATC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
3UTR-3UTR TCA 90 bp ATTTTACATGCTAATCACAAAGACAAATGGAGGGAAGATACAGTGATAACACCATTTCACATTGAACACTaGGTTGTAACAGCACAGTTT +
Preference number: 2 (lower is better)
Translates to: ILHANHKDKWREDTVITPFHIEH*VVTAQF
Trigger: AAACTGTGCTGTTACAACTCAGTGTTCAATGTGAAA...TGGTGTTATCACTGTATCTTCCCTCCATTTGTCTTTGTGATTAGCATGTAAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
3UTR-3UTR GCA 90 bp ATTTTACATGCTAATCACAAAGACAAATGGAGGGAAGATACAGTGATAACACCAAGTAAGTCTCTCAAATaGTCTTACGAGACTACTTTG +
Preference number: 2 (lower is better)
Translates to: ILHANHKDKWREDTVITPSKSLK*SYETTL
Trigger: CAAAGTAGTCTCGTAAGAGCATTTGAGAGACTTACT...TGGTGTTATCACTGTATCTTCCCTCCATTTGTCTTTGTGATTAGCATGTAAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
3UTR-3UTR CCA 90 bp ATTTTACATGCTAATCACAAAGACAAATGGAGGGAAGATACAGTGATAACACCATCAAAGGACAAGAAATaGATTGTTCTAGCTCTTGTC +
Preference number: 2 (lower is better)
Translates to: ILHANHKDKWREDTVITPSKDKK*IVLALV
Trigger: GACAAGAGCTAGAACAATCCATTTCTTGTCCTTTGA...TGGTGTTATCACTGTATCTTCCCTCCATTTGTCTTTGTGATTAGCATGTAAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
3UTR CCA 72 bp GCAGCATCCGCTCGGAGCACTTCTGCCCCACCAGGCTaGCGTACTGCAGAACAGCAGCCTCCTCACTTGGGT +
Preference number: 3 (lower is better)
Translates to: AASARSTSAPPG*RTAEQQPPHLG
Trigger: ACCCAAGTGAGGAGGCTGCTGTTCTGCAGTACGCCAGCCTGGTGGGGCAGAAGTGCTCCGAGCGGATGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423243.6
3UTR GCA 72 bp CAGTTTCTGAACAGCAGCATCCGCTCGGAGCACTTCTaGCCCACCAGGCTGGCGTACTGCAGAACAGCAGCC +
Preference number: 3 (lower is better)
Translates to: QFLNSSIRSEHF*PTRLAYCRTAA
Trigger: GGCTGCTGTTCTGCAGTACGCCAGCCTGGTGGGGCAGAAGTGCTCCGAGCGGATGCTGCTGTTCAGAAACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423243.6
3UTR-3UTR CAA 90 bp CTGCCCCACCAGGCTGGCGTACTGCAGAACAGCAGCCTCCTCACTTGGGTCTTTCAACAGCATCATCCATaGTGGAATCCATGGGCTCAT +
Preference number: 3 (lower is better)
Translates to: LPHQAGVLQNSSLLTWVFQQHHP*WNPWAH
Trigger: ATGAGCCCATGGATTCCACAATGGATGATGCTGTTG...AAAGACCCAAGTGAGGAGGCTGCTGTTCTGCAGTACGCCAGCCTGGTGGGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423243.6
3UTR-3UTR CAA 90 bp CCGGCAGAGGTGAACAGGTCAGTTTCTGAACAGCAGCATCCGCTCGGAGCACTTTGGCTGAAAGACGACTaGAACTCTGGGTCCTCAAAG +
Preference number: 3 (lower is better)
Translates to: PAEVNRSVSEQQHPLGALWLKDD*NSGSSK
Trigger: CTTTGAGGACCCAGAGTTCAAGTCGTCTTTCAGCCA...AAGTGCTCCGAGCGGATGCTGCTGTTCAGAAACTGACCTGTTCACCTCTGCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423243.6
3UTR-3UTR CAA 90 bp CTCCAATGCTCAAGTCACTCTGAGTCTTTGCTGGTGTCAACCTACAATGCCACCACAGTGCCTGCCACCTaGACAGGTGGGCAAAGGACT +
Preference number: 3 (lower is better)
Translates to: LQCSSHSESLLVSTYNATTVPAT*TGGQRT
Trigger: AGTCCTTTGCCCACCTGTCAAGGTGGCAGGCACTGT...GGTGGCATTGTAGGTTGACACCAGCAAAGACTCAGAGTGACTTGAGCATTGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
3UTR TCA 72 bp AATCATCAGCACAACACAGGAACTTCCCGGCAGAGGTaGACAGGTCAGTTTCTGAACAGCAGCATCCGCTCG +
Preference number: 3 (lower is better)
Translates to: NHQHNTGTSRQR*TGQFLNSSIRS
Trigger: CGAGCGGATGCTGCTGTTCAGAAACTGACCTGTTCACCTCTGCCGGGAAGTTCCTGTGTTGTGCTGATGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423243.6
3UTR-3UTR CAA 90 bp TCTGAGTCTTTGCTGGTGTCAACCTACAATGCCACCCTCAAGGAAAGCACAGTGAGAGTACGCAGCACCTaGGCAGGTGTGACACACACA +
Preference number: 3 (lower is better)
Translates to: SESLLVSTYNATLKESTVRVRST*AGVTHT
Trigger: TGTGTGTGTCACACCTGCCAAGGTGCTGCGTACTCT...CACTGTGCTTTCCTTGAGGGTGGCATTGTAGGTTGACACCAGCAAAGACTCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
3UTR TCA 72 bp CACAGTTTGGGAGGATGTCAATCACCCCCACAGCAATaGTCTTTCCGTCAAGCCAGTACTGCTGGTGAAAGG +
Preference number: 3 (lower is better)
Translates to: HSLGGCQSPPQQ*SFRQASTAGER
Trigger: CCTTTCACCAGCAGTACTGGCTTGACGGAAAGATCATTGCTGTGGGGGTGATTGACATCCTCCCAAACTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423243.6
3UTR CCA 72 bp CAGGCTGGCGTACTGCAGAACAGCAGCCTCCTCACTTaGGTCTTTCTGCTGTTTCTTATAAACACCGTAAGG +
Preference number: 3 (lower is better)
Translates to: QAGVLQNSSLLT*VFLLFLINTVR
Trigger: CCTTACGGTGTTTATAAGAAACAGCAGAAAGACCCAAGTGAGGAGGCTGCTGTTCTGCAGTACGCCAGCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423243.6
3UTR-3UTR CAA 90 bp AGTAGAAGGATCTCCAATGCTCAAGTCACTCTGAGTCTTTGCTGGTGTCAACCTAGAGTACGCAGCACCTaGGCAGGTGTGACACACACA +
Preference number: 3 (lower is better)
Translates to: SRRISNAQVTLSLCWCQPRVRST*AGVTHT
Trigger: TGTGTGTGTCACACCTGCCAAGGTGCTGCGTACTCT...AGGTTGACACCAGCAAAGACTCAGAGTGACTTGAGCATTGGAGATCCTTCTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
3UTR TCA 72 bp CTCAAATCAGCCCCTTTGCCTGGCTTAGGAACTGTGTaGACTTTAACTGAATGTGACGGTTCACCAGAGCCC +
Preference number: 3 (lower is better)
Translates to: LKSAPLPGLGTV*TLTECDGSPEP
Trigger: GGGCTCTGGTGAACCGTCACATTCAGTTAAAGTTCACACAGTTCCTAAGCCAGGCAAAGGGGCTGATTTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423243.6
3UTR TCA 72 bp TACTGCGATCCTCATCCACTGCTTCTGGGTCCTGGTTaGAACGGCAGTACTTGGAGTTTTCAAGTGAAGGCA +
Preference number: 3 (lower is better)
Translates to: YCDPHPLLLGPG*NGSTWSFQVKA
Trigger: TGCCTTCACTTGAAAACTCCAAGTACTGCCGTTTCAACCAGGACCCAGAAGCAGTGGATGAGGATCGCAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423243.6
3UTR-3UTR CAA 90 bp AAACGGCAGTACTTGGAGTTTTCAAGTGAAGGCAGGCATTGCTCAATGGGTACCTCCTCACAACTTCCTTaGGGAACCTCCCCTTTAGCT +
Preference number: 3 (lower is better)
Translates to: KRQYLEFSSEGRHCSMGTSSQLP*GTSPLA
Trigger: AGCTAAAGGGGAGGTTCCCAAAGGAAGTTGTGAGGA...GGTACCCATTGAGCAATGCCTGCCTTCACTTGAAAACTCCAAGTACTGCCGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423243.6
3UTR TCA 72 bp AGCCAAGTAGAAGGATCTCCAATGCTCAAGTCACTCTaGGTCTTTGCTGGTGTCAACCTACAATGCCACCCT +
Preference number: 3 (lower is better)
Translates to: SQVEGSPMLKSL*VFAGVNLQCHP
Trigger: AGGGTGGCATTGTAGGTTGACACCAGCAAAGACTCAGAGTGACTTGAGCATTGGAGATCCTTCTACTTGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
3UTR CCA 72 bp AGGATCTCCAATGCTCAAGTCACTCTGAGTCTTTGCTaGTGTCAACCTACAATGCCACCCTCAAGGAAAGCA +
Preference number: 3 (lower is better)
Translates to: RISNAQVTLSLC*CQPTMPPSRKA
Trigger: TGCTTTCCTTGAGGGTGGCATTGTAGGTTGACACCAGCAAAGACTCAGAGTGACTTGAGCATTGGAGATCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
3UTR CCA 72 bp TCAATGCAAAGTCACCCGCAACAGCATCATCCATTGTaGAATCCATGGGCTCATCCTCACAACTTCCTTTGG +
Preference number: 3 (lower is better)
Translates to: SMQSHPQQHHPL*NPWAHPHNFLW
Trigger: CCAAAGGAAGTTGTGAGGATGAGCCCATGGATTCCACAATGGATGATGCTGTTGCGGGTGACTTTGCATTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423243.6
3UTR-3UTR CAA 90 bp ATCAGAGAAAATGGCTTTGCTCACTACTCTAGCTCGGTTAGCAGAGTACGCAGCAGAAATGCGGCTGACTaGGATGTTGAGTTTCTAGAG +
Preference number: 3 (lower is better)
Translates to: IRENGFAHYSSSVSRVRSRNAAD*DVEFLE
Trigger: CTCTAGAAACTCAACATCCAAGTCAGCCGCATTTCT...GCTGCGTACTCTGCTAACCGAGCTAGAGTAGTGAGCAAAGCCATTTTCTCTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
3UTR TCA 72 bp GTCCTGGTTGAAACGGCAGTACTTGGAGTTTTCAAGTaGAGGCAGGCATTGCTCAATGGGTACCCAAACATA +
Preference number: 3 (lower is better)
Translates to: VLVETAVLGVFK*RQALLNGYPNI
Trigger: TATGTTTGGGTACCCATTGAGCAATGCCTGCCTTCACTTGAAAACTCCAAGTACTGCCGTTTCAACCAGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423243.6
3UTR GCA 72 bp AGAAGGATCTCCAATGCTCAAGTCACTCTGAGTCTTTaGTGGTGTCAACCTACAATGCCACCCTCAAGGAAA +
Preference number: 3 (lower is better)
Translates to: RRISNAQVTLSL*WCQPTMPPSRK
Trigger: TTTCCTTGAGGGTGGCATTGTAGGTTGACACCAGCAAAGACTCAGAGTGACTTGAGCATTGGAGATCCTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
3UTR-3UTR CAA 90 bp CTCCAATGCTCAAGTCACTCTGAGTCTTTGCTGGTGTCAACCTACAATGCCACCTACAAACAGGAGAATTaGAGCGTATCTTGCTCTAGA +
Preference number: 3 (lower is better)
Translates to: LQCSSHSESLLVSTYNATYKQEN*SVSCSR
Trigger: TCTAGAGCAAGATACGCTCAAATTCTCCTGTTTGTA...GGTGGCATTGTAGGTTGACACCAGCAAAGACTCAGAGTGACTTGAGCATTGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
3UTR-3UTR CAA 90 bp AGTAGAAGGATCTCCAATGCTCAAGTCACTCTGAGTCTTTGCTGGTGTCAACCTAGAAATGCGGCTGACTaGGATGTTGAGTTTCTAGAG +
Preference number: 3 (lower is better)
Translates to: SRRISNAQVTLSLCWCQPRNAAD*DVEFLE
Trigger: CTCTAGAAACTCAACATCCAAGTCAGCCGCATTTCT...AGGTTGACACCAGCAAAGACTCAGAGTGACTTGAGCATTGGAGATCCTTCTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
3UTR-3UTR CAA 90 bp CTCCAATGCTCAAGTCACTCTGAGTCTTTGCTGGTGTCAACCTACAATGCCACCAGTGATAACACCAAGTaGGACATTCAAATGCTAAGC +
Preference number: 3 (lower is better)
Translates to: LQCSSHSESLLVSTYNATSDNTK*DIQMLS
Trigger: GCTTAGCATTTGAATGTCCAACTTGGTGTTATCACT...GGTGGCATTGTAGGTTGACACCAGCAAAGACTCAGAGTGACTTGAGCATTGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
3UTR-3UTR CAA 90 bp AAACGGCAGTACTTGGAGTTTTCAAGTGAAGGCAGGCATTGCTCAATGGGTACCCTGGTGTATGGCCACTaGATACTTGACATACAAAGA +
Preference number: 3 (lower is better)
Translates to: KRQYLEFSSEGRHCSMGTLVYGH*ILDIQR
Trigger: TCTTTGTATGTCAAGTATCAAGTGGCCATACACCAG...GGTACCCATTGAGCAATGCCTGCCTTCACTTGAAAACTCCAAGTACTGCCGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423243.6
3UTR TCA 72 bp CCACATTCATCGGGTGGATCCTGGTGTATGGCCACTTaGTACTTGACATACAAAGAAAAGGACTGGCTGAAA +
Preference number: 3 (lower is better)
Translates to: PHSSGGSWCMAT*YLTYKEKDWLK
Trigger: TTTCAGCCAGTCCTTTTCTTTGTATGTCAAGTATCAAGTGGCCATACACCAGGATCCACCCGATGAATGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423243.6
3UTR CCA 72 bp GACAGTTATTTCCCCACAGGTACTGAATATGTATCCTaGCACAAATCATCAGCACAACACAGGAACTTCCCG +
Preference number: 3 (lower is better)
Translates to: DSYFPTGTEYVS*HKSSAQHRNFP
Trigger: CGGGAAGTTCCTGTGTTGTGCTGATGATTTGTGCCAGGATACATATTCAGTACCTGTGGGGAAATAACTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000423243.6
ENST00000540606.6
3UTR CCA 72 bp TGTCAACCTACAATGCCACCCTCAAGGAAAGCACAGTaGTTCACAGACAGGGATGATTCATCATTTTCCTCT +
Preference number: 3 (lower is better)
Translates to: CQPTMPPSRKAQ*FTDRDDSSFSS
Trigger: AGAGGAAAATGATGAATCATCCCTGTCTGTGAACCACTGTGCTTTCCTTGAGGGTGGCATTGTAGGTTGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
3UTR CCA 72 bp GAATCTTGTGAACTCAGTCTTCCCACATTCATCGGGTaGATCCTGGTGTATGGCCACTTGATACTTGACATA +
Preference number: 3 (lower is better)
Translates to: ESCELSLPTFIG*ILVYGHLILDI
Trigger: TATGTCAAGTATCAAGTGGCCATACACCAGGATCCACCCGATGAATGTGGGAAGACTGAGTTCACAAGATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423243.6
3UTR CCA 72 bp ACTTGGAGTTTTCAAGTGAAGGCAGGCATTGCTCAATaGGTACCCAAACATATGTCTCAGGGCACAGCAAAT +
Preference number: 3 (lower is better)
Translates to: TWSFQVKAGIAQ*VPKHMSQGTAN
Trigger: ATTTGCTGTGCCCTGAGACATATGTTTGGGTACCCATTGAGCAATGCCTGCCTTCACTTGAAAACTCCAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423243.6
3UTR-3UTR CAA 90 bp ATTTTACATGCTAATCACAAAGACAAATGGAGGGAAGATACAGTGATAACACCAACAGTGCCTGCCACCTaGACAGGTGGGCAAAGGACT +
Preference number: 3 (lower is better)
Translates to: ILHANHKDKWREDTVITPTVPAT*TGGQRT
Trigger: AGTCCTTTGCCCACCTGTCAAGGTGGCAGGCACTGT...TGGTGTTATCACTGTATCTTCCCTCCATTTGTCTTTGTGATTAGCATGTAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
3UTR-3UTR CAA 90 bp GATCAATACACTAGCTATTCTCAAACCAACATAATGCATGAATACAGCAGCCAAAGAGTACGCAGCACCTaGGCAGGTGTGACACACACA +
Preference number: 3 (lower is better)
Translates to: DQYTSYSQTNIMHEYSSQRVRST*AGVTHT
Trigger: TGTGTGTGTCACACCTGCCAAGGTGCTGCGTACTCT...TTGGCTGCTGTATTCATGCATTATGTTGGTTTGAGAATAGCTAGTGTATTGATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
3UTR-3UTR CAA 90 bp TCTCAGGGCACAGCAAATCAGAAGGTCTATACTGACCCTTATATTTCATCTTGGCAGATGATACACAGTTaGGGAGGATGTCAATCACCC +
Preference number: 3 (lower is better)
Translates to: SQGTANQKVYTDPYISSWQMIHS*GGCQSP
Trigger: GGGTGATTGACATCCTCCCAAACTGTGTATCATCTG...CCAAGATGAAATATAAGGGTCAGTATAGACCTTCTGATTTGCTGTGCCCTGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423243.6
3UTR-3UTR CAA 90 bp CTGCTGTTTCTTATAAACACCGTAAGGCATGATGGCTCTCTTGTGAAACACCTGTTGAAACGGCAGTACTaGGAGTTTTCAAGTGAAGGC +
Preference number: 3 (lower is better)
Translates to: LLFLINTVRHDGSLVKHLLKRQY*EFSSEG
Trigger: GCCTTCACTTGAAAACTCCAAGTACTGCCGTTTCAA...CAGGTGTTTCACAAGAGAGCCATCATGCCTTACGGTGTTTATAAGAAACAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423243.6
3UTR-3UTR CAA 90 bp TCCCCACAGGTACTGAATATGTATCCTGGCACAAATCATCAGCACAACACAGGATACAAACAGGAGAATTaGAGCGTATCTTGCTCTAGA +
Preference number: 3 (lower is better)
Translates to: SPQVLNMYPGTNHQHNTGYKQEN*SVSCSR
Trigger: TCTAGAGCAAGATACGCTCAAATTCTCCTGTTTGTA...TCCTGTGTTGTGCTGATGATTTGTGCCAGGATACATATTCAGTACCTGTGGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000423243.6
ENST00000540606.6
3UTR-3UTR CAA 90 bp AGTAGAAGGATCTCCAATGCTCAAGTCACTCTGAGTCTTTGCTGGTGTCAACCTTACAAACAGGAGAATTaGAGCGTATCTTGCTCTAGA +
Preference number: 3 (lower is better)
Translates to: SRRISNAQVTLSLCWCQPYKQEN*SVSCSR
Trigger: TCTAGAGCAAGATACGCTCAAATTCTCCTGTTTGTA...AGGTTGACACCAGCAAAGACTCAGAGTGACTTGAGCATTGGAGATCCTTCTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
3UTR-3UTR CAA 90 bp CATGCTAATCACAAAGACAAATGGAGGGAAGATACAGTGATAACACCAAGTTGGTCAGAGAAAATGGCTTaGCTCACTACTCTAGCTCGG +
Preference number: 3 (lower is better)
Translates to: HANHKDKWREDTVITPSWSEKMA*LTTLAR
Trigger: CCGAGCTAGAGTAGTGAGCAAAGCCATTTTCTCTGA...CCAACTTGGTGTTATCACTGTATCTTCCCTCCATTTGTCTTTGTGATTAGCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
3UTR-3UTR CAA 90 bp CATGCTAATCACAAAGACAAATGGAGGGAAGATACAGTGATAACACCAAGTTGGAGAAATGCGGCTGACTaGGATGTTGAGTTTCTAGAG +
Preference number: 3 (lower is better)
Translates to: HANHKDKWREDTVITPSWRNAAD*DVEFLE
Trigger: CTCTAGAAACTCAACATCCAAGTCAGCCGCATTTCT...CCAACTTGGTGTTATCACTGTATCTTCCCTCCATTTGTCTTTGTGATTAGCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
3UTR TCA 72 bp GACTGCTGGTCAAGTAACAAGGTGGGTCACTTTTCTTaGCTATGCTTTTCTAGTCCACTATCAGTATTCACT +
Preference number: 3 (lower is better)
Translates to: DCWSSNKVGHFS*LCFSSPLSVFT
Trigger: AGTGAATACTGATAGTGGACTAGAAAAGCATAGTCAAGAAAAGTGACCCACCTTGTTACTTGACCAGCAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
3UTR TCA 72 bp AAACGAATAATCAGGATCGTAGTACAAATACACAGATaGTACACAGTTTGGGAGGATGTCAATCACCCCCAC +
Preference number: 3 (lower is better)
Translates to: KRIIRIVVQIHR*YTVWEDVNHPH
Trigger: GTGGGGGTGATTGACATCCTCCCAAACTGTGTATCATCTGTGTATTTGTACTACGATCCTGATTATTCGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423243.6
3UTR-3UTR CAA 90 bp CATGCTAATCACAAAGACAAATGGAGGGAAGATACAGTGATAACACCAAGTTGGTCTTACGAGACTACTTaGCAGGTCAAAATCCCAGAA +
Preference number: 3 (lower is better)
Translates to: HANHKDKWREDTVITPSWSYETT*QVKIPE
Trigger: TTCTGGGATTTTGACCTGCAAAGTAGTCTCGTAAGA...CCAACTTGGTGTTATCACTGTATCTTCCCTCCATTTGTCTTTGTGATTAGCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
3UTR-3UTR CAA 90 bp TCTCAGGGCACAGCAAATCAGAAGGTCTATACTGACCCTTATATTTCATCTTGGCTCTCTAAACTCTCTTaGATGTCATCACTGAGTGTT +
Preference number: 3 (lower is better)
Translates to: SQGTANQKVYTDPYISSWLSKLS*MSSLSV
Trigger: AACACTCAGTGATGACATCAAAGAGAGTTTAGAGAG...CCAAGATGAAATATAAGGGTCAGTATAGACCTTCTGATTTGCTGTGCCCTGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423243.6
3UTR-3UTR CAA 90 bp ATTTTACATGCTAATCACAAAGACAAATGGAGGGAAGATACAGTGATAACACCATCAGAGAAAATGGCTTaGCTCACTACTCTAGCTCGG +
Preference number: 3 (lower is better)
Translates to: ILHANHKDKWREDTVITPSEKMA*LTTLAR
Trigger: CCGAGCTAGAGTAGTGAGCAAAGCCATTTTCTCTGA...TGGTGTTATCACTGTATCTTCCCTCCATTTGTCTTTGTGATTAGCATGTAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
3UTR-3UTR CAA 90 bp GATCAATACACTAGCTATTCTCAAACCAACATAATGCATGAATACAGCAGCCAATCTTACGAGACTACTTaGCAGGTCAAAATCCCAGAA +
Preference number: 3 (lower is better)
Translates to: DQYTSYSQTNIMHEYSSQSYETT*QVKIPE
Trigger: TTCTGGGATTTTGACCTGCAAAGTAGTCTCGTAAGA...TTGGCTGCTGTATTCATGCATTATGTTGGTTTGAGAATAGCTAGTGTATTGATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
3UTR TCA 72 bp GGAAATAATTTAAATAAGGACGGTAGCAAGGGGAATTaGAATTACATCTTTGCTCCCAAAACAGGAAGGCAG +
Preference number: 3 (lower is better)
Translates to: GNNLNKDGSKGN*NYIFAPKTGRQ
Trigger: CTGCCTTCCTGTTTTGGGAGCAAAGATGTAATTTCAATTCCCCTTGCTACCGTCCTTATTTAAATTATTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
3UTR-3UTR CAA 90 bp GATCAATACACTAGCTATTCTCAAACCAACATAATGCATGAATACAGCAGCCAAAGTGATAACACCAAGTaGGACATTCAAATGCTAAGC +
Preference number: 3 (lower is better)
Translates to: DQYTSYSQTNIMHEYSSQSDNTK*DIQMLS
Trigger: GCTTAGCATTTGAATGTCCAACTTGGTGTTATCACT...TTGGCTGCTGTATTCATGCATTATGTTGGTTTGAGAATAGCTAGTGTATTGATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
3UTR-3UTR CAA 90 bp GATCAATACACTAGCTATTCTCAAACCAACATAATGCATGAATACAGCAGCCAAAGTTGTGGTAAGATGTaGGAGTCAAGTTTTCTCTTC +
Preference number: 3 (lower is better)
Translates to: DQYTSYSQTNIMHEYSSQSCGKM*ESSFLF
Trigger: GAAGAGAAAACTTGACTCCAACATCTTACCACAACT...TTGGCTGCTGTATTCATGCATTATGTTGGTTTGAGAATAGCTAGTGTATTGATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR GCA 90 bp GCTTTGCTCACTACTCTAGCTCGGTTAGCAGAGTACGCAGCACCTTGGCAGGTGCGCTCGGAGCACTTCTaGCCCACCAGGCTGGCGTAC +
Preference number: 4 (lower is better)
Translates to: ALLTTLARLAEYAAPWQVRSEHF*PTRLAY
Trigger: GTACGCCAGCCTGGTGGGGCAGAAGTGCTCCGAGCG...CACCTGCCAAGGTGCTGCGTACTCTGCTAACCGAGCTAGAGTAGTGAGCAAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR GCA 90 bp CACCTGCAATCGGTCAGGTTCCGTACTGCGATCCTCATCCACTGCTTCTGGGTCACCAGGCTGGCGTACTaGAGAACAGCAGCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: HLQSVRFRTAILIHCFWVTRLAY*RTAASS
Trigger: TGAGGAGGCTGCTGTTCTGCAGTACGCCAGCCTGGT...GACCCAGAAGCAGTGGATGAGGATCGCAGTACGGAACCTGACCGATTGCAGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423243.6
CDS-3UTR GCA 90 bp TGTGGAATCCATGGGCTCATCCTCACAACTTCCTTTGGGAACCTCCCCTTTAGCCGCTCGGAGCACTTCTaGCCCACCAGGCTGGCGTAC +
Preference number: 4 (lower is better)
Translates to: CGIHGLILTTSFGNLPFSRSEHF*PTRLAY
Trigger: GTACGCCAGCCTGGTGGGGCAGAAGTGCTCCGAGCG...GCTAAAGGGGAGGTTCCCAAAGGAAGTTGTGAGGATGAGCCCATGGATTCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423243.6
CDS-3UTR CCA 90 bp ATCAGAGAAAATGGCTTTGCTCACTACTCTAGCTCGGTTAGCAGAGTACGCAGCCCGCCCAGAAAGCCATaGCCTCGGCCCCGCGAACGC +
Preference number: 4 (lower is better)
Translates to: IRENGFAHYSSSVSRVRSPPRKP*PRPRER
Trigger: GCGTTCGCGGGGCCGAGGCCATGGCTTTCTGGGCGG...GCTGCGTACTCTGCTAACCGAGCTAGAGTAGTGAGCAAAGCCATTTTCTCTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
CDS-3UTR GCA 90 bp GCTTTGCTCACTACTCTAGCTCGGTTAGCAGAGTACGCAGCACCTTGGCAGGTGACCAGGCTGGCGTACTaGAGAACAGCAGCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: ALLTTLARLAEYAAPWQVTRLAY*RTAASS
Trigger: TGAGGAGGCTGCTGTTCTGCAGTACGCCAGCCTGGT...CACCTGCCAAGGTGCTGCGTACTCTGCTAACCGAGCTAGAGTAGTGAGCAAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR GCA 90 bp CTCCAATGCTCAAGTCACTCTGAGTCTTTGCTGGTGTCAACCTACAATGCCACCCGCTCGGAGCACTTCTaGCCCACCAGGCTGGCGTAC +
Preference number: 4 (lower is better)
Translates to: LQCSSHSESLLVSTYNATRSEHF*PTRLAY
Trigger: GTACGCCAGCCTGGTGGGGCAGAAGTGCTCCGAGCG...GGTGGCATTGTAGGTTGACACCAGCAAAGACTCAGAGTGACTTGAGCATTGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR GCA 90 bp TCTGAGTCTTTGCTGGTGTCAACCTACAATGCCACCCTCAAGGAAAGCACAGTGCGCTCGGAGCACTTCTaGCCCACCAGGCTGGCGTAC +
Preference number: 4 (lower is better)
Translates to: SESLLVSTYNATLKESTVRSEHF*PTRLAY
Trigger: GTACGCCAGCCTGGTGGGGCAGAAGTGCTCCGAGCG...CACTGTGCTTTCCTTGAGGGTGGCATTGTAGGTTGACACCAGCAAAGACTCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR GCA 90 bp GCTTTGCTCACTACTCTAGCTCGGTTAGCAGAGTACGCAGCACCTTGGCAGGTGTGCCGCAGGACGCTTTaGCCTCCTTGGAATCGCAGT +
Preference number: 4 (lower is better)
Translates to: ALLTTLARLAEYAAPWQVCRRTL*PPWNRS
Trigger: ACTGCGATTCCAAGGAGGGCAAAGCGTCCTGCGGCA...CACCTGCCAAGGTGCTGCGTACTCTGCTAACCGAGCTAGAGTAGTGAGCAAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540606.6
CDS-3UTR CCA 90 bp AGTAGAAGGATCTCCAATGCTCAAGTCACTCTGAGTCTTTGCTGGTGTCAACCTCCGCCCAGAAAGCCATaGCCTCGGCCCCGCGAACGC +
Preference number: 4 (lower is better)
Translates to: SRRISNAQVTLSLCWCQPPPRKP*PRPRER
Trigger: GCGTTCGCGGGGCCGAGGCCATGGCTTTCTGGGCGG...AGGTTGACACCAGCAAAGACTCAGAGTGACTTGAGCATTGGAGATCCTTCTACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
CDS-3UTR CCA 90 bp CAGCACCTTGGCAGGTGTGACACACACACTCTGAATGAAGAAATGCGGCTGACTGTGCCCACATGCCATTaGAGCGGCTGCCCGACTCGT +
Preference number: 4 (lower is better)
Translates to: QHLGRCDTHTLNEEMRLTVPTCH*SGCPTR
Trigger: ACGAGTCGGGCAGCCGCTCCAATGGCATGTGGGCAC...AGTCAGCCGCATTTCTTCATTCAGAGTGTGTGTGTCACACCTGCCAAGGTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
CDS-3UTR CCA 90 bp CACCTGCAATCGGTCAGGTTCCGTACTGCGATCCTCATCCACTGCTTCTGGGTCGCCATAGCCACAATCTaGCCCATTAGGGGGAGTCTC +
Preference number: 4 (lower is better)
Translates to: HLQSVRFRTAILIHCFWVAIATI*PIRGSL
Trigger: GAGACTCCCCCTAATGGGCCAGATTGTGGCTATGGC...GACCCAGAAGCAGTGGATGAGGATCGCAGTACGGAACCTGACCGATTGCAGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423243.6
CDS-3UTR CCA 90 bp CTGCCCCACCAGGCTGGCGTACTGCAGAACAGCAGCCTCCTCACTTGGGTCTTTACTGCTTCTGGGTCCTaGTTGAAACGGCAGTACTTG +
Preference number: 4 (lower is better)
Translates to: LPHQAGVLQNSSLLTWVFTASGS*LKRQYL
Trigger: CAAGTACTGCCGTTTCAACCAGGACCCAGAAGCAGT...AAAGACCCAAGTGAGGAGGCTGCTGTTCTGCAGTACGCCAGCCTGGTGGGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423243.6
CDS-3UTR TCA 90 bp GCTTTGCTCACTACTCTAGCTCGGTTAGCAGAGTACGCAGCACCTTGGCAGGTGCGAACTTGGTGGAGATaGTCTCACCACCCTCACCTC +
Preference number: 4 (lower is better)
Translates to: ALLTTLARLAEYAAPWQVRTWWR*SHHPHL
Trigger: GAGGTGAGGGTGGTGAGATCATCTCCACCAAGTTCG...CACCTGCCAAGGTGCTGCGTACTCTGCTAACCGAGCTAGAGTAGTGAGCAAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224652.11
CDS-3UTR TCA 90 bp CACCTGCAATCGGTCAGGTTCCGTACTGCGATCCTCATCCACTGCTTCTGGGTCTCACCCCCACAGCAATaGTCTTTCCGTCAAGCCAGT +
Preference number: 4 (lower is better)
Translates to: HLQSVRFRTAILIHCFWVSPPQQ*SFRQAS
Trigger: ACTGGCTTGACGGAAAGATCATTGCTGTGGGGGTGA...GACCCAGAAGCAGTGGATGAGGATCGCAGTACGGAACCTGACCGATTGCAGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423243.6
CDS-3UTR TCA 90 bp CAGCACCTTGGCAGGTGTGACACACACACTCTGAATGAAGAAATGCGGCTGACTCAGTGCCTGCCACCTTaGCAGGTGGGCAAAGGACTC +
Preference number: 4 (lower is better)
Translates to: QHLGRCDTHTLNEEMRLTQCLPP*QVGKGL
Trigger: GAGTCCTTTGCCCACCTGTCAAGGTGGCAGGCACTG...AGTCAGCCGCATTTCTTCATTCAGAGTGTGTGTGTCACACCTGCCAAGGTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CCA 90 bp GCTTTGCTCACTACTCTAGCTCGGTTAGCAGAGTACGCAGCACCTTGGCAGGTGGCCATAGCCACAATCTaGCCCATTAGGGGGAGTCTC +
Preference number: 4 (lower is better)
Translates to: ALLTTLARLAEYAAPWQVAIATI*PIRGSL
Trigger: GAGACTCCCCCTAATGGGCCAGATTGTGGCTATGGC...CACCTGCCAAGGTGCTGCGTACTCTGCTAACCGAGCTAGAGTAGTGAGCAAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CCA 90 bp CTCTCTTGTGAAACACCTGCAATCGGTCAGGTTCCGTACTGCGATCCTCATCCAAAAGGTCGGCACCATTaGAGCGGCTGCCCGACTCGT +
Preference number: 4 (lower is better)
Translates to: LSCETPAIGQVPYCDPHPKGRHH*SGCPTR
Trigger: ACGAGTCGGGCAGCCGCTCCAATGGTGCCGACCTTT...TGGATGAGGATCGCAGTACGGAACCTGACCGATTGCAGGTGTTTCACAAGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423243.6
CDS-3UTR TCA 90 bp GCTTTGCTCACTACTCTAGCTCGGTTAGCAGAGTACGCAGCACCTTGGCAGGTGTCACCCCCACAGCAATaGTCTTTCCGTCAAGCCAGT +
Preference number: 4 (lower is better)
Translates to: ALLTTLARLAEYAAPWQVSPPQQ*SFRQAS
Trigger: ACTGGCTTGACGGAAAGATCATTGCTGTGGGGGTGA...CACCTGCCAAGGTGCTGCGTACTCTGCTAACCGAGCTAGAGTAGTGAGCAAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR TCA 90 bp GCTTTGCTCACTACTCTAGCTCGGTTAGCAGAGTACGCAGCACCTTGGCAGGTGACTTCCCGGCAGAGGTaGACAGGTCAGTTTCTGAAC +
Preference number: 4 (lower is better)
Translates to: ALLTTLARLAEYAAPWQVTSRQR*TGQFLN
Trigger: GTTCAGAAACTGACCTGTTCACCTCTGCCGGGAAGT...CACCTGCCAAGGTGCTGCGTACTCTGCTAACCGAGCTAGAGTAGTGAGCAAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR TCA 90 bp CTCCAATGCTCAAGTCACTCTGAGTCTTTGCTGGTGTCAACCTACAATGCCACCCAGTGCCTGCCACCTTaGCAGGTGGGCAAAGGACTC +
Preference number: 4 (lower is better)
Translates to: LQCSSHSESLLVSTYNATQCLPP*QVGKGL
Trigger: GAGTCCTTTGCCCACCTGTCAAGGTGGCAGGCACTG...GGTGGCATTGTAGGTTGACACCAGCAAAGACTCAGAGTGACTTGAGCATTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR TCA 90 bp GCTTTGCTCACTACTCTAGCTCGGTTAGCAGAGTACGCAGCACCTTGGCAGGTGAAGAAGGGACATGTCTaGCTGTCCTCCTGTACCCAG +
Preference number: 4 (lower is better)
Translates to: ALLTTLARLAEYAAPWQVKKGHV*LSSCTQ
Trigger: CTGGGTACAGGAGGACAGTCAGACATGTCCCTTCTT...CACCTGCCAAGGTGCTGCGTACTCTGCTAACCGAGCTAGAGTAGTGAGCAAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR GCA 90 bp CTCTCTTGTGAAACACCTGCAATCGGTCAGGTTCCGTACTGCGATCCTCATCCACACCATTGGAGCGGCTaGCCGACTCGTTCTTGCAGT +
Preference number: 4 (lower is better)
Translates to: LSCETPAIGQVPYCDPHPHHWSG*PTRSCS
Trigger: ACTGCAAGAACGAGTCGGGCAGCCGCTCCAATGGTG...TGGATGAGGATCGCAGTACGGAACCTGACCGATTGCAGGTGTTTCACAAGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423243.6
CDS-3UTR CCA 90 bp TCTGAGTCTTTGCTGGTGTCAACCTACAATGCCACCCTCAAGGAAAGCACAGTGTCTGCCCCACCAGGCTaGCGTACTGCAGAACAGCAG +
Preference number: 4 (lower is better)
Translates to: SESLLVSTYNATLKESTVSAPPG*RTAEQQ
Trigger: CTGCTGTTCTGCAGTACGCCAGCCTGGTGGGGCAGA...CACTGTGCTTTCCTTGAGGGTGGCATTGTAGGTTGACACCAGCAAAGACTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CCA 90 bp CTCCAATGCTCAAGTCACTCTGAGTCTTTGCTGGTGTCAACCTACAATGCCACCTCTGCCCCACCAGGCTaGCGTACTGCAGAACAGCAG +
Preference number: 4 (lower is better)
Translates to: LQCSSHSESLLVSTYNATSAPPG*RTAEQQ
Trigger: CTGCTGTTCTGCAGTACGCCAGCCTGGTGGGGCAGA...GGTGGCATTGTAGGTTGACACCAGCAAAGACTCAGAGTGACTTGAGCATTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR TCA 90 bp GCTTTGCTCACTACTCTAGCTCGGTTAGCAGAGTACGCAGCACCTTGGCAGGTGTGCAAAGGAATCTTGTaGACTGGCTTTCGGTTGGCG +
Preference number: 4 (lower is better)
Translates to: ALLTTLARLAEYAAPWQVCKGIL*TGFRLA
Trigger: CGCCAACCGAAAGCCAGTTCACAAGATTCCTTTGCA...CACCTGCCAAGGTGCTGCGTACTCTGCTAACCGAGCTAGAGTAGTGAGCAAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224652.11
CDS-3UTR TCA 90 bp GCTTTGCTCACTACTCTAGCTCGGTTAGCAGAGTACGCAGCACCTTGGCAGGTGCTCTGCCTCCAAGGGTaGACTGCAAAGGAATCTTGT +
Preference number: 4 (lower is better)
Translates to: ALLTTLARLAEYAAPWQVLCLQG*TAKESC
Trigger: ACAAGATTCCTTTGCAGTTCACCCTTGGAGGCAGAG...CACCTGCCAAGGTGCTGCGTACTCTGCTAACCGAGCTAGAGTAGTGAGCAAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR TCA 90 bp CAGCACCTTGGCAGGTGTGACACACACACTCTGAATGAAGAAATGCGGCTGACTGAACAGGTCAGTTTCTaGACAGCAGCATCCGCTCGG +
Preference number: 4 (lower is better)
Translates to: QHLGRCDTHTLNEEMRLTEQVSF*TAASAR
Trigger: CCGAGCGGATGCTGCTGTTCAGAAACTGACCTGTTC...AGTCAGCCGCATTTCTTCATTCAGAGTGTGTGTGTCACACCTGCCAAGGTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR GCA 90 bp GCTTTGCTCACTACTCTAGCTCGGTTAGCAGAGTACGCAGCACCTTGGCAGGTGGGTGTCAACCTACAATaGCACCCTCAAGGAAAGCAC +
Preference number: 4 (lower is better)
Translates to: ALLTTLARLAEYAAPWQVGVNLQ*HPQGKH
Trigger: GTGCTTTCCTTGAGGGTGGCATTGTAGGTTGACACC...CACCTGCCAAGGTGCTGCGTACTCTGCTAACCGAGCTAGAGTAGTGAGCAAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CCA 90 bp TCCCCACAGGTACTGAATATGTATCCTGGCACAAATCATCAGCACAACACAGGAGTGCCCACATGCCATTaGAGCGGCTGCCCGACTCGT +
Preference number: 4 (lower is better)
Translates to: SPQVLNMYPGTNHQHNTGVPTCH*SGCPTR
Trigger: ACGAGTCGGGCAGCCGCTCCAATGGCATGTGGGCAC...TCCTGTGTTGTGCTGATGATTTGTGCCAGGATACATATTCAGTACCTGTGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
CDS-3UTR CCA 90 bp CTGCCCCACCAGGCTGGCGTACTGCAGAACAGCAGCCTCCTCACTTGGGTCTTTCTTTGCTTTTCGACATaGAGGCTTACTCAAATCAGC +
Preference number: 4 (lower is better)
Translates to: LPHQAGVLQNSSLLTWVFLCFST*RLTQIS
Trigger: GCTGATTTGAGTAAGCCTCCATGTCGAAAAGCAAAG...AAAGACCCAAGTGAGGAGGCTGCTGTTCTGCAGTACGCCAGCCTGGTGGGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423243.6
CDS-3UTR CCA 90 bp GCTTTGCTCACTACTCTAGCTCGGTTAGCAGAGTACGCAGCACCTTGGCAGGTGACTGCTTCTGGGTCCTaGTTGAAACGGCAGTACTTG +
Preference number: 4 (lower is better)
Translates to: ALLTTLARLAEYAAPWQVTASGS*LKRQYL
Trigger: CAAGTACTGCCGTTTCAACCAGGACCCAGAAGCAGT...CACCTGCCAAGGTGCTGCGTACTCTGCTAACCGAGCTAGAGTAGTGAGCAAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CCA 90 bp TCCATGGGCTCATCCTCACAACTTCCTTTGGGAACCTCCCCTTTAGCTAGAAATTCTGCCCCACCAGGCTaGCGTACTGCAGAACAGCAG +
Preference number: 4 (lower is better)
Translates to: SMGSSSQLPLGTSPLARNSAPPG*RTAEQQ
Trigger: CTGCTGTTCTGCAGTACGCCAGCCTGGTGGGGCAGA...ATTTCTAGCTAAAGGGGAGGTTCCCAAAGGAAGTTGTGAGGATGAGCCCATGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423243.6
CDS-3UTR CCA 90 bp GCTTTGCTCACTACTCTAGCTCGGTTAGCAGAGTACGCAGCACCTTGGCAGGTGAATCCTGTACTGTCATaGAATGTGCCCACATGCCGC +
Preference number: 4 (lower is better)
Translates to: ALLTTLARLAEYAAPWQVNPVLS*NVPTCR
Trigger: GCGGCATGTGGGCACATTCCATGACAGTACAGGATT...CACCTGCCAAGGTGCTGCGTACTCTGCTAACCGAGCTAGAGTAGTGAGCAAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540606.6
CDS-3UTR TCA 90 bp GCTTTGCTCACTACTCTAGCTCGGTTAGCAGAGTACGCAGCACCTTGGCAGGTGGCCATCCTCGGTCTATaGGATCCTGATAATCCTGTA +
Preference number: 4 (lower is better)
Translates to: ALLTTLARLAEYAAPWQVAILGL*DPDNPV
Trigger: TACAGGATTATCAGGATCTCATAGACCGAGGATGGC...CACCTGCCAAGGTGCTGCGTACTCTGCTAACCGAGCTAGAGTAGTGAGCAAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR TCA 90 bp CAGCACCTTGGCAGGTGTGACACACACACTCTGAATGAAGAAATGCGGCTGACTCCAGAAGTGTGGCTTTaGACTGCGAACTTGGTGGAG +
Preference number: 4 (lower is better)
Translates to: QHLGRCDTHTLNEEMRLTPEVWL*TANLVE
Trigger: CTCCACCAAGTTCGCAGTTCAAAGCCACACTTCTGG...AGTCAGCCGCATTTCTTCATTCAGAGTGTGTGTGTCACACCTGCCAAGGTGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224652.11
CDS-3UTR TCA 90 bp GCTTTGCTCACTACTCTAGCTCGGTTAGCAGAGTACGCAGCACCTTGGCAGGTGATGATGGCTCTCTTGTaGAACACCTGCAATCGGTCA +
Preference number: 4 (lower is better)
Translates to: ALLTTLARLAEYAAPWQVMMALL*NTCNRS
Trigger: TGACCGATTGCAGGTGTTTCACAAGAGAGCCATCAT...CACCTGCCAAGGTGCTGCGTACTCTGCTAACCGAGCTAGAGTAGTGAGCAAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR TCA 90 bp CTGCCCCACCAGGCTGGCGTACTGCAGAACAGCAGCCTCCTCACTTGGGTCTTTACAAACAGGAGAATTTaGGCGTATCTTGCTCTAGAA +
Preference number: 4 (lower is better)
Translates to: LPHQAGVLQNSSLLTWVFTNRRI*AYLALE
Trigger: TTCTAGAGCAAGATACGCTCAAATTCTCCTGTTTGT...AAAGACCCAAGTGAGGAGGCTGCTGTTCTGCAGTACGCCAGCCTGGTGGGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423243.6
CDS-3UTR TCA 90 bp CCCACAGGTACTGAATATGTATCCTGGCACAAATCATCAGCACAACACAGGAACCAGTGCCTGCCACCTTaGCAGGTGGGCAAAGGACTC +
Preference number: 4 (lower is better)
Translates to: PTGTEYVSWHKSSAQHRNQCLPP*QVGKGL
Trigger: GAGTCCTTTGCCCACCTGTCAAGGTGGCAGGCACTG...GTTCCTGTGTTGTGCTGATGATTTGTGCCAGGATACATATTCAGTACCTGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR TCA 90 bp AGTAGAAGGATCTCCAATGCTCAAGTCACTCTGAGTCTTTGCTGGTGTCAACCTCAGTGCCTGCCACCTTaGCAGGTGGGCAAAGGACTC +
Preference number: 4 (lower is better)
Translates to: SRRISNAQVTLSLCWCQPQCLPP*QVGKGL
Trigger: GAGTCCTTTGCCCACCTGTCAAGGTGGCAGGCACTG...AGGTTGACACCAGCAAAGACTCAGAGTGACTTGAGCATTGGAGATCCTTCTACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR GCA 90 bp ATCAGAGAAAATGGCTTTGCTCACTACTCTAGCTCGGTTAGCAGAGTACGCAGCTGCCCGACTCGTTCTTaGAGTAGCCGCAGCGGTAGA +
Preference number: 4 (lower is better)
Translates to: IRENGFAHYSSSVSRVRSCPTRS*SSRSGR
Trigger: TCTACCGCTGCGGCTACTGCAAGAACGAGTCGGGCA...GCTGCGTACTCTGCTAACCGAGCTAGAGTAGTGAGCAAAGCCATTTTCTCTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
CDS-3UTR GCA 90 bp AAACGGCAGTACTTGGAGTTTTCAAGTGAAGGCAGGCATTGCTCAATGGGTACCTGCCCGACTCGTTCTTaGAGTAGCCGCAGCGGTAGA +
Preference number: 4 (lower is better)
Translates to: KRQYLEFSSEGRHCSMGTCPTRS*SSRSGR
Trigger: TCTACCGCTGCGGCTACTGCAAGAACGAGTCGGGCA...GGTACCCATTGAGCAATGCCTGCCTTCACTTGAAAACTCCAAGTACTGCCGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423243.6
CDS-3UTR GCA 90 bp CTCTCTTGTGAAACACCTGCAATCGGTCAGGTTCCGTACTGCGATCCTCATCCAGGTCAGGTTCCGTACTaGGATCCTCATCCACTGCTT +
Preference number: 4 (lower is better)
Translates to: LSCETPAIGQVPYCDPHPGQVPY*DPHPLL
Trigger: AAGCAGTGGATGAGGATCGCAGTACGGAACCTGACC...TGGATGAGGATCGCAGTACGGAACCTGACCGATTGCAGGTGTTTCACAAGAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423243.6
CDS-3UTR CCA 90 bp GCTTTGCTCACTACTCTAGCTCGGTTAGCAGAGTACGCAGCACCTTGGCAGGTGCCATTGTGGAATCCATaGGCTCATCCTCACAACTTC +
Preference number: 4 (lower is better)
Translates to: ALLTTLARLAEYAAPWQVPLWNP*AHPHNF
Trigger: GAAGTTGTGAGGATGAGCCCATGGATTCCACAATGG...CACCTGCCAAGGTGCTGCGTACTCTGCTAACCGAGCTAGAGTAGTGAGCAAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CCA 90 bp TCTGAGTCTTTGCTGGTGTCAACCTACAATGCCACCCTCAAGGAAAGCACAGTGGCCATAGCCACAATCTaGCCCATTAGGGGGAGTCTC +
Preference number: 4 (lower is better)
Translates to: SESLLVSTYNATLKESTVAIATI*PIRGSL
Trigger: GAGACTCCCCCTAATGGGCCAGATTGTGGCTATGGC...CACTGTGCTTTCCTTGAGGGTGGCATTGTAGGTTGACACCAGCAAAGACTCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CCA 90 bp CAGCACCTTGGCAGGTGTGACACACACACTCTGAATGAAGAAATGCGGCTGACTCTCATCCACTGCTTCTaGGTCCTGGTTGAAACGGCA +
Preference number: 4 (lower is better)
Translates to: QHLGRCDTHTLNEEMRLTLIHCF*VLVETA
Trigger: TGCCGTTTCAACCAGGACCCAGAAGCAGTGGATGAG...AGTCAGCCGCATTTCTTCATTCAGAGTGTGTGTGTCACACCTGCCAAGGTGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CCA 90 bp TCTGAGTCTTTGCTGGTGTCAACCTACAATGCCACCCTCAAGGAAAGCACAGTGCCCACATTCATCGGGTaGATCCTGGTGTATGGCCAC +
Preference number: 4 (lower is better)
Translates to: SESLLVSTYNATLKESTVPTFIG*ILVYGH
Trigger: GTGGCCATACACCAGGATCCACCCGATGAATGTGGG...CACTGTGCTTTCCTTGAGGGTGGCATTGTAGGTTGACACCAGCAAAGACTCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CCA 90 bp GATCAATACACTAGCTATTCTCAAACCAACATAATGCATGAATACAGCAGCCAACCACCACCGACGCCATaGCCGCCGCGAGGGTCCGCT +
Preference number: 4 (lower is better)
Translates to: DQYTSYSQTNIMHEYSSQPPPTP*PPRGSA
Trigger: AGCGGACCCTCGCGGCGGCCATGGCGTCGGTGGTGG...TTGGCTGCTGTATTCATGCATTATGTTGGTTTGAGAATAGCTAGTGTATTGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540606.6
CDS-3UTR TCA 90 bp CAGCACCTTGGCAGGTGTGACACACACACTCTGAATGAAGAAATGCGGCTGACTCTCTGCCTCCAAGGGTaGACTGCAAAGGAATCTTGT +
Preference number: 4 (lower is better)
Translates to: QHLGRCDTHTLNEEMRLTLCLQG*TAKESC
Trigger: ACAAGATTCCTTTGCAGTTCACCCTTGGAGGCAGAG...AGTCAGCCGCATTTCTTCATTCAGAGTGTGTGTGTCACACCTGCCAAGGTGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR TCA 90 bp TCTGAGTCTTTGCTGGTGTCAACCTACAATGCCACCCTCAAGGAAAGCACAGTGCTTCTGGGTCCTGGTTaGAACGGCAGTACTTGGAGT +
Preference number: 4 (lower is better)
Translates to: SESLLVSTYNATLKESTVLLGPG*NGSTWS
Trigger: ACTCCAAGTACTGCCGTTTCAACCAGGACCCAGAAG...CACTGTGCTTTCCTTGAGGGTGGCATTGTAGGTTGACACCAGCAAAGACTCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR TCA 90 bp ATCAGAGAAAATGGCTTTGCTCACTACTCTAGCTCGGTTAGCAGAGTACGCAGCGAACAGGTCAGTTTCTaGACAGCAGCATCCGCTCGG +
Preference number: 4 (lower is better)
Translates to: IRENGFAHYSSSVSRVRSEQVSF*TAASAR
Trigger: CCGAGCGGATGCTGCTGTTCAGAAACTGACCTGTTC...GCTGCGTACTCTGCTAACCGAGCTAGAGTAGTGAGCAAAGCCATTTTCTCTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR TCA 90 bp CTCCAATGCTCAAGTCACTCTGAGTCTTTGCTGGTGTCAACCTACAATGCCACCACTTCCCGGCAGAGGTaGACAGGTCAGTTTCTGAAC +
Preference number: 4 (lower is better)
Translates to: LQCSSHSESLLVSTYNATTSRQR*TGQFLN
Trigger: GTTCAGAAACTGACCTGTTCACCTCTGCCGGGAAGT...GGTGGCATTGTAGGTTGACACCAGCAAAGACTCAGAGTGACTTGAGCATTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR TCA 90 bp AGTAGAAGGATCTCCAATGCTCAAGTCACTCTGAGTCTTTGCTGGTGTCAACCTGGCTGGCCTCTGCTCTaGGTTACTAAGGGTGGCAGA +
Preference number: 4 (lower is better)
Translates to: SRRISNAQVTLSLCWCQPGWPLL*VTKGGR
Trigger: TCTGCCACCCTTAGTAACTCAGAGCAGAGGCCAGCC...AGGTTGACACCAGCAAAGACTCAGAGTGACTTGAGCATTGGAGATCCTTCTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR TCA 90 bp TCCCCACAGGTACTGAATATGTATCCTGGCACAAATCATCAGCACAACACAGGAGGCTGGCCTCTGCTCTaGGTTACTAAGGGTGGCAGA +
Preference number: 4 (lower is better)
Translates to: SPQVLNMYPGTNHQHNTGGWPLL*VTKGGR
Trigger: TCTGCCACCCTTAGTAACTCAGAGCAGAGGCCAGCC...TCCTGTGTTGTGCTGATGATTTGTGCCAGGATACATATTCAGTACCTGTGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR TCA 90 bp CAGCACCTTGGCAGGTGTGACACACACACTCTGAATGAAGAAATGCGGCTGACTGAAGAGGGGATCAGCTaGCAAAGAGGGCACAAGAAA +
Preference number: 4 (lower is better)
Translates to: QHLGRCDTHTLNEEMRLTEEGIS*QRGHKK
Trigger: TTTCTTGTGCCCTCTTTGTCAGCTGATCCCCTCTTC...AGTCAGCCGCATTTCTTCATTCAGAGTGTGTGTGTCACACCTGCCAAGGTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR GCA 90 bp CCCACAGGTACTGAATATGTATCCTGGCACAAATCATCAGCACAACACAGGAACTGCCCGACTCGTTCTTaGAGTAGCCGCAGCGGTAGA +
Preference number: 4 (lower is better)
Translates to: PTGTEYVSWHKSSAQHRNCPTRS*SSRSGR
Trigger: TCTACCGCTGCGGCTACTGCAAGAACGAGTCGGGCA...GTTCCTGTGTTGTGCTGATGATTTGTGCCAGGATACATATTCAGTACCTGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000423243.6
CDS-3UTR GCA 90 bp TCTGAGTCTTTGCTGGTGTCAACCTACAATGCCACCCTCAAGGAAAGCACAGTGGGTCAGGTTCCGTACTaGGATCCTCATCCACTGCTT +
Preference number: 4 (lower is better)
Translates to: SESLLVSTYNATLKESTVGQVPY*DPHPLL
Trigger: AAGCAGTGGATGAGGATCGCAGTACGGAACCTGACC...CACTGTGCTTTCCTTGAGGGTGGCATTGTAGGTTGACACCAGCAAAGACTCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR GCA 90 bp CCCACAGGTACTGAATATGTATCCTGGCACAAATCATCAGCACAACACAGGAACACCAGGCTGGCGTACTaGAGAACAGCAGCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: PTGTEYVSWHKSSAQHRNTRLAY*RTAASS
Trigger: TGAGGAGGCTGCTGTTCTGCAGTACGCCAGCCTGGT...GTTCCTGTGTTGTGCTGATGATTTGTGCCAGGATACATATTCAGTACCTGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000423243.6
ENST00000540606.6
CDS-3UTR GCA 90 bp AGTAGAAGGATCTCCAATGCTCAAGTCACTCTGAGTCTTTGCTGGTGTCAACCTACCAGGCTGGCGTACTaGAGAACAGCAGCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: SRRISNAQVTLSLCWCQPTRLAY*RTAASS
Trigger: TGAGGAGGCTGCTGTTCTGCAGTACGCCAGCCTGGT...AGGTTGACACCAGCAAAGACTCAGAGTGACTTGAGCATTGGAGATCCTTCTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR GCA 90 bp GCTTTGCTCACTACTCTAGCTCGGTTAGCAGAGTACGCAGCACCTTGGCAGGTGGTCACTCTGAGTCTTTaGTGGTGTCAACCTACAATG +
Preference number: 4 (lower is better)
Translates to: ALLTTLARLAEYAAPWQVVTLSL*WCQPTM
Trigger: CATTGTAGGTTGACACCAGCAAAGACTCAGAGTGAC...CACCTGCCAAGGTGCTGCGTACTCTGCTAACCGAGCTAGAGTAGTGAGCAAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CCA 90 bp CAGCACCTTGGCAGGTGTGACACACACACTCTGAATGAAGAAATGCGGCTGACTTGGTGGAAACAAAGATaGTGGGTGACCTTGAGCCTG +
Preference number: 4 (lower is better)
Translates to: QHLGRCDTHTLNEEMRLTWWKQR*WVTLSL
Trigger: CAGGCTCAAGGTCACCCACCATCTTTGTTTCCACCA...AGTCAGCCGCATTTCTTCATTCAGAGTGTGTGTGTCACACCTGCCAAGGTGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CCA 90 bp GCTTTGCTCACTACTCTAGCTCGGTTAGCAGAGTACGCAGCACCTTGGCAGGTGGCAGGCATTGCTCAATaGGTACCCAAACATATGTCT +
Preference number: 4 (lower is better)
Translates to: ALLTTLARLAEYAAPWQVAGIAQ*VPKHMS
Trigger: AGACATATGTTTGGGTACCCATTGAGCAATGCCTGC...CACCTGCCAAGGTGCTGCGTACTCTGCTAACCGAGCTAGAGTAGTGAGCAAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CCA 90 bp CAGCACCTTGGCAGGTGTGACACACACACTCTGAATGAAGAAATGCGGCTGACTACTGCTTCTGGGTCCTaGTTGAAACGGCAGTACTTG +
Preference number: 4 (lower is better)
Translates to: QHLGRCDTHTLNEEMRLTTASGS*LKRQYL
Trigger: CAAGTACTGCCGTTTCAACCAGGACCCAGAAGCAGT...AGTCAGCCGCATTTCTTCATTCAGAGTGTGTGTGTCACACCTGCCAAGGTGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CCA 90 bp GCTTTGCTCACTACTCTAGCTCGGTTAGCAGAGTACGCAGCACCTTGGCAGGTGTCAAGGAAAGCACAGTaGTTCACAGACAGGGATGAT +
Preference number: 4 (lower is better)
Translates to: ALLTTLARLAEYAAPWQVSRKAQ*FTDRDD
Trigger: ATCATCCCTGTCTGTGAACCACTGTGCTTTCCTTGA...CACCTGCCAAGGTGCTGCGTACTCTGCTAACCGAGCTAGAGTAGTGAGCAAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CCA 90 bp GCTTTGCTCACTACTCTAGCTCGGTTAGCAGAGTACGCAGCACCTTGGCAGGTGACTCTGAGTCTTTGCTaGTGTCAACCTACAATGCCA +
Preference number: 4 (lower is better)
Translates to: ALLTTLARLAEYAAPWQVTLSLC*CQPTMP
Trigger: TGGCATTGTAGGTTGACACCAGCAAAGACTCAGAGT...CACCTGCCAAGGTGCTGCGTACTCTGCTAACCGAGCTAGAGTAGTGAGCAAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CCA 90 bp CTCTCTTGTGAAACACCTGCAATCGGTCAGGTTCCGTACTGCGATCCTCATCCAAGACGACTTGAACTCTaGGTCCTCAAAGGAGACAGG +
Preference number: 4 (lower is better)
Translates to: LSCETPAIGQVPYCDPHPRRLEL*VLKGDR
Trigger: CCTGTCTCCTTTGAGGACCCAGAGTTCAAGTCGTCT...TGGATGAGGATCGCAGTACGGAACCTGACCGATTGCAGGTGTTTCACAAGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423243.6
3UTR CAA 72 bp GTACTGCGATCCTCATCCACTGCTTCTGGGTCCTGGTaGAAACGGCAGTACTTGGAGTTTTCAAGTGAAGGC +
Preference number: 4 (lower is better)
Translates to: VLRSSSTASGSW*KRQYLEFSSEG
Trigger: GCCTTCACTTGAAAACTCCAAGTACTGCCGTTTCAACCAGGACCCAGAAGCAGTGGATGAGGATCGCAGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423243.6
CDS-3UTR TCA 90 bp CAGCACCTTGGCAGGTGTGACACACACACTCTGAATGAAGAAATGCGGCTGACTGCCATCCTCGGTCTATaGGATCCTGATAATCCTGTA +
Preference number: 4 (lower is better)
Translates to: QHLGRCDTHTLNEEMRLTAILGL*DPDNPV
Trigger: TACAGGATTATCAGGATCTCATAGACCGAGGATGGC...AGTCAGCCGCATTTCTTCATTCAGAGTGTGTGTGTCACACCTGCCAAGGTGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR TCA 90 bp CAGCACCTTGGCAGGTGTGACACACACACTCTGAATGAAGAAATGCGGCTGACTATGATGGCTCTCTTGTaGAACACCTGCAATCGGTCA +
Preference number: 4 (lower is better)
Translates to: QHLGRCDTHTLNEEMRLTMMALL*NTCNRS
Trigger: TGACCGATTGCAGGTGTTTCACAAGAGAGCCATCAT...AGTCAGCCGCATTTCTTCATTCAGAGTGTGTGTGTCACACCTGCCAAGGTGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR TCA 90 bp CCCACAGGTACTGAATATGTATCCTGGCACAAATCATCAGCACAACACAGGAACGAACAGGTCAGTTTCTaGACAGCAGCATCCGCTCGG +
Preference number: 4 (lower is better)
Translates to: PTGTEYVSWHKSSAQHRNEQVSF*TAASAR
Trigger: CCGAGCGGATGCTGCTGTTCAGAAACTGACCTGTTC...GTTCCTGTGTTGTGCTGATGATTTGTGCCAGGATACATATTCAGTACCTGTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000423243.6
ENST00000540606.6
CDS-3UTR TCA 90 bp GCTTTGCTCACTACTCTAGCTCGGTTAGCAGAGTACGCAGCACCTTGGCAGGTGGAACAGAGGTCGGAATaGTTCCTTCTTCAATGTGAT +
Preference number: 4 (lower is better)
Translates to: ALLTTLARLAEYAAPWQVEQRSE*FLLQCD
Trigger: ATCACATTGAAGAAGGAATCATTCCGACCTCTGTTC...CACCTGCCAAGGTGCTGCGTACTCTGCTAACCGAGCTAGAGTAGTGAGCAAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR TCA 90 bp ATCAGAGAAAATGGCTTTGCTCACTACTCTAGCTCGGTTAGCAGAGTACGCAGCAAGAAGGGACATGTCTaGCTGTCCTCCTGTACCCAG +
Preference number: 4 (lower is better)
Translates to: IRENGFAHYSSSVSRVRSKKGHV*LSSCTQ
Trigger: CTGGGTACAGGAGGACAGTCAGACATGTCCCTTCTT...GCTGCGTACTCTGCTAACCGAGCTAGAGTAGTGAGCAAAGCCATTTTCTCTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR TCA 90 bp CTCCAATGCTCAAGTCACTCTGAGTCTTTGCTGGTGTCAACCTACAATGCCACCGAAGAGGGGATCAGCTaGCAAAGAGGGCACAAGAAA +
Preference number: 4 (lower is better)
Translates to: LQCSSHSESLLVSTYNATEEGIS*QRGHKK
Trigger: TTTCTTGTGCCCTCTTTGTCAGCTGATCCCCTCTTC...GGTGGCATTGTAGGTTGACACCAGCAAAGACTCAGAGTGACTTGAGCATTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR TCA 90 bp CAGCACCTTGGCAGGTGTGACACACACACTCTGAATGAAGAAATGCGGCTGACTATGCTCAAGTCACTCTaGGTCTTTGCTGGTGTCAAC +
Preference number: 4 (lower is better)
Translates to: QHLGRCDTHTLNEEMRLTMLKSL*VFAGVN
Trigger: GTTGACACCAGCAAAGACTCAGAGTGACTTGAGCAT...AGTCAGCCGCATTTCTTCATTCAGAGTGTGTGTGTCACACCTGCCAAGGTGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR GCA 90 bp GCTTTGCTCACTACTCTAGCTCGGTTAGCAGAGTACGCAGCACCTTGGCAGGTGTTTCCGGATTTCCTTTaGTTTTCGACATGGAGGCTT +
Preference number: 4 (lower is better)
Translates to: ALLTTLARLAEYAAPWQVFPDFL*FSTWRL
Trigger: AAGCCTCCATGTCGAAAAGCAAAGGAAATCCGGAAA...CACCTGCCAAGGTGCTGCGTACTCTGCTAACCGAGCTAGAGTAGTGAGCAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR GCA 90 bp GCTTTGCTCACTACTCTAGCTCGGTTAGCAGAGTACGCAGCACCTTGGCAGGTGCCAGCTGGGTTCTGCTaGATTAGTTTTAACCTTTTC +
Preference number: 4 (lower is better)
Translates to: ALLTTLARLAEYAAPWQVPAGFC*ISFNLF
Trigger: GAAAAGGTTAAAACTAATGCAGCAGAACCCAGCTGG...CACCTGCCAAGGTGCTGCGTACTCTGCTAACCGAGCTAGAGTAGTGAGCAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR GCA 90 bp GCTTTGCTCACTACTCTAGCTCGGTTAGCAGAGTACGCAGCACCTTGGCAGGTGTCTCCAGCTGGGTTCTaGTGCATTAGTTTTAACCTT +
Preference number: 4 (lower is better)
Translates to: ALLTTLARLAEYAAPWQVSPAGF*CISFNL
Trigger: AAGGTTAAAACTAATGCAGCAGAACCCAGCTGGAGA...CACCTGCCAAGGTGCTGCGTACTCTGCTAACCGAGCTAGAGTAGTGAGCAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR GCA 90 bp AGTAGAAGGATCTCCAATGCTCAAGTCACTCTGAGTCTTTGCTGGTGTCAACCTTACTGTCATGGAATGTaGCCACATGCCGCAGGACGC +
Preference number: 4 (lower is better)
Translates to: SRRISNAQVTLSLCWCQPYCHGM*PHAAGR
Trigger: GCGTCCTGCGGCATGTGGGCACATTCCATGACAGTA...AGGTTGACACCAGCAAAGACTCAGAGTGACTTGAGCATTGGAGATCCTTCTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540606.6
CDS-3UTR CCA 90 bp ATTTTACATGCTAATCACAAAGACAAATGGAGGGAAGATACAGTGATAACACCACCGCCCAGAAAGCCATaGCCTCGGCCCCGCGAACGC +
Preference number: 4 (lower is better)
Translates to: ILHANHKDKWREDTVITPPPRKP*PRPRER
Trigger: GCGTTCGCGGGGCCGAGGCCATGGCTTTCTGGGCGG...TGGTGTTATCACTGTATCTTCCCTCCATTTGTCTTTGTGATTAGCATGTAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
CDS-3UTR CCA 90 bp TGTGGAATCCATGGGCTCATCCTCACAACTTCCTTTGGGAACCTCCCCTTTAGCCCATTGTGGAATCCATaGGCTCATCCTCACAACTTC +
Preference number: 4 (lower is better)
Translates to: CGIHGLILTTSFGNLPFSPLWNP*AHPHNF
Trigger: GAAGTTGTGAGGATGAGCCCATGGATTCCACAATGG...GCTAAAGGGGAGGTTCCCAAAGGAAGTTGTGAGGATGAGCCCATGGATTCCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423243.6
CDS-3UTR CCA 90 bp GCTTTGCTCACTACTCTAGCTCGGTTAGCAGAGTACGCAGCACCTTGGCAGGTGCTTTGCTTTTCGACATaGAGGCTTACTCAAATCAGC +
Preference number: 4 (lower is better)
Translates to: ALLTTLARLAEYAAPWQVLCFST*RLTQIS
Trigger: GCTGATTTGAGTAAGCCTCCATGTCGAAAAGCAAAG...CACCTGCCAAGGTGCTGCGTACTCTGCTAACCGAGCTAGAGTAGTGAGCAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CCA 90 bp CCCACAGGTACTGAATATGTATCCTGGCACAAATCATCAGCACAACACAGGAACGCCATAGCCACAATCTaGCCCATTAGGGGGAGTCTC +
Preference number: 4 (lower is better)
Translates to: PTGTEYVSWHKSSAQHRNAIATI*PIRGSL
Trigger: GAGACTCCCCCTAATGGGCCAGATTGTGGCTATGGC...GTTCCTGTGTTGTGCTGATGATTTGTGCCAGGATACATATTCAGTACCTGTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000423243.6
ENST00000540606.6
CDS-3UTR CCA 90 bp AGTAGAAGGATCTCCAATGCTCAAGTCACTCTGAGTCTTTGCTGGTGTCAACCTGCCATAGCCACAATCTaGCCCATTAGGGGGAGTCTC +
Preference number: 4 (lower is better)
Translates to: SRRISNAQVTLSLCWCQPAIATI*PIRGSL
Trigger: GAGACTCCCCCTAATGGGCCAGATTGTGGCTATGGC...AGGTTGACACCAGCAAAGACTCAGAGTGACTTGAGCATTGGAGATCCTTCTACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CCA 90 bp GCTTTGCTCACTACTCTAGCTCGGTTAGCAGAGTACGCAGCACCTTGGCAGGTGCAGTATTCACTCAGCTaGGGCTCAAAAGGACAAATA +
Preference number: 4 (lower is better)
Translates to: ALLTTLARLAEYAAPWQVQYSLS*GSKGQI
Trigger: TATTTGTCCTTTTGAGCCCCAGCTGAGTGAATACTG...CACCTGCCAAGGTGCTGCGTACTCTGCTAACCGAGCTAGAGTAGTGAGCAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CCA 90 bp CAGCACCTTGGCAGGTGTGACACACACACTCTGAATGAAGAAATGCGGCTGACTTCTCAGCTAGACTGCTaGTCAAGTAACAAGGTGGGT +
Preference number: 4 (lower is better)
Translates to: QHLGRCDTHTLNEEMRLTSQLDC*SSNKVG
Trigger: ACCCACCTTGTTACTTGACCAGCAGTCTAGCTGAGA...AGTCAGCCGCATTTCTTCATTCAGAGTGTGTGTGTCACACCTGCCAAGGTGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CCA 90 bp TCTGAGTCTTTGCTGGTGTCAACCTACAATGCCACCCTCAAGGAAAGCACAGTGAGACGACTTGAACTCTaGGTCCTCAAAGGAGACAGG +
Preference number: 4 (lower is better)
Translates to: SESLLVSTYNATLKESTVRRLEL*VLKGDR
Trigger: CCTGTCTCCTTTGAGGACCCAGAGTTCAAGTCGTCT...CACTGTGCTTTCCTTGAGGGTGGCATTGTAGGTTGACACCAGCAAAGACTCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CCA 90 bp TCCCCACAGGTACTGAATATGTATCCTGGCACAAATCATCAGCACAACACAGGACCCACATTCATCGGGTaGATCCTGGTGTATGGCCAC +
Preference number: 4 (lower is better)
Translates to: SPQVLNMYPGTNHQHNTGPTFIG*ILVYGH
Trigger: GTGGCCATACACCAGGATCCACCCGATGAATGTGGG...TCCTGTGTTGTGCTGATGATTTGTGCCAGGATACATATTCAGTACCTGTGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369043.8
ENST00000423243.6
ENST00000540606.6
CDS-3UTR CCA 90 bp AGTAGAAGGATCTCCAATGCTCAAGTCACTCTGAGTCTTTGCTGGTGTCAACCTACGCTTTGCCCTCCTTaGAATCGCAGTAGCCGCAGT +
Preference number: 4 (lower is better)
Translates to: SRRISNAQVTLSLCWCQPTLCPP*NRSSRS
Trigger: ACTGCGGCTACTGCGATTCCAAGGAGGGCAAAGCGT...AGGTTGACACCAGCAAAGACTCAGAGTGACTTGAGCATTGGAGATCCTTCTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540606.6
3UTR CAA 72 bp TCCACTGCTTCTGGGTCCTGGTTGAAACGGCAGTACTaGGAGTTTTCAAGTGAAGGCAGGCATTGCTCAATG +
Preference number: 4 (lower is better)
Translates to: STASGSWLKRQY*EFSSEGRHCSM
Trigger: CATTGAGCAATGCCTGCCTTCACTTGAAAACTCCAAGTACTGCCGTTTCAACCAGGACCCAGAAGCAGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423243.6
CDS-3UTR TCA 90 bp AGTAGAAGGATCTCCAATGCTCAAGTCACTCTGAGTCTTTGCTGGTGTCAACCTTCACCCCCACAGCAATaGTCTTTCCGTCAAGCCAGT +
Preference number: 4 (lower is better)
Translates to: SRRISNAQVTLSLCWCQPSPPQQ*SFRQAS
Trigger: ACTGGCTTGACGGAAAGATCATTGCTGTGGGGGTGA...AGGTTGACACCAGCAAAGACTCAGAGTGACTTGAGCATTGGAGATCCTTCTACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR TCA 90 bp AGTAGAAGGATCTCCAATGCTCAAGTCACTCTGAGTCTTTGCTGGTGTCAACCTCTTCTGGGTCCTGGTTaGAACGGCAGTACTTGGAGT +
Preference number: 4 (lower is better)
Translates to: SRRISNAQVTLSLCWCQPLLGPG*NGSTWS
Trigger: ACTCCAAGTACTGCCGTTTCAACCAGGACCCAGAAG...AGGTTGACACCAGCAAAGACTCAGAGTGACTTGAGCATTGGAGATCCTTCTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR TCA 90 bp AGTAGAAGGATCTCCAATGCTCAAGTCACTCTGAGTCTTTGCTGGTGTCAACCTACTTCCCGGCAGAGGTaGACAGGTCAGTTTCTGAAC +
Preference number: 4 (lower is better)
Translates to: SRRISNAQVTLSLCWCQPTSRQR*TGQFLN
Trigger: GTTCAGAAACTGACCTGTTCACCTCTGCCGGGAAGT...AGGTTGACACCAGCAAAGACTCAGAGTGACTTGAGCATTGGAGATCCTTCTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR TCA 90 bp CCCACAGGTACTGAATATGTATCCTGGCACAAATCATCAGCACAACACAGGAACACTTCCCGGCAGAGGTaGACAGGTCAGTTTCTGAAC +
Preference number: 4 (lower is better)
Translates to: PTGTEYVSWHKSSAQHRNTSRQR*TGQFLN
Trigger: GTTCAGAAACTGACCTGTTCACCTCTGCCGGGAAGT...GTTCCTGTGTTGTGCTGATGATTTGTGCCAGGATACATATTCAGTACCTGTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000423243.6
ENST00000540606.6
CDS-3UTR TCA 90 bp TCCCCACAGGTACTGAATATGTATCCTGGCACAAATCATCAGCACAACACAGGAACTTCCCGGCAGAGGTaGACAGGTCAGTTTCTGAAC +
Preference number: 4 (lower is better)
Translates to: SPQVLNMYPGTNHQHNTGTSRQR*TGQFLN
Trigger: GTTCAGAAACTGACCTGTTCACCTCTGCCGGGAAGT...TCCTGTGTTGTGCTGATGATTTGTGCCAGGATACATATTCAGTACCTGTGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000423243.6
ENST00000540606.6
CDS-3UTR TCA 90 bp GCTTTGCTCACTACTCTAGCTCGGTTAGCAGAGTACGCAGCACCTTGGCAGGTGACAAACAGGAGAATTTaGGCGTATCTTGCTCTAGAA +
Preference number: 4 (lower is better)
Translates to: ALLTTLARLAEYAAPWQVTNRRI*AYLALE
Trigger: TTCTAGAGCAAGATACGCTCAAATTCTCCTGTTTGT...CACCTGCCAAGGTGCTGCGTACTCTGCTAACCGAGCTAGAGTAGTGAGCAAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR TCA 90 bp CCCACAGGTACTGAATATGTATCCTGGCACAAATCATCAGCACAACACAGGAACAAGAAGGGACATGTCTaGCTGTCCTCCTGTACCCAG +
Preference number: 4 (lower is better)
Translates to: PTGTEYVSWHKSSAQHRNKKGHV*LSSCTQ
Trigger: CTGGGTACAGGAGGACAGTCAGACATGTCCCTTCTT...GTTCCTGTGTTGTGCTGATGATTTGTGCCAGGATACATATTCAGTACCTGTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR TCA 90 bp AGTAGAAGGATCTCCAATGCTCAAGTCACTCTGAGTCTTTGCTGGTGTCAACCTAAGAAGGGACATGTCTaGCTGTCCTCCTGTACCCAG +
Preference number: 4 (lower is better)
Translates to: SRRISNAQVTLSLCWCQPKKGHV*LSSCTQ
Trigger: CTGGGTACAGGAGGACAGTCAGACATGTCCCTTCTT...AGGTTGACACCAGCAAAGACTCAGAGTGACTTGAGCATTGGAGATCCTTCTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR TCA 90 bp TCTGAGTCTTTGCTGGTGTCAACCTACAATGCCACCCTCAAGGAAAGCACAGTGATGCTCAAGTCACTCTaGGTCTTTGCTGGTGTCAAC +
Preference number: 4 (lower is better)
Translates to: SESLLVSTYNATLKESTVMLKSL*VFAGVN
Trigger: GTTGACACCAGCAAAGACTCAGAGTGACTTGAGCAT...CACTGTGCTTTCCTTGAGGGTGGCATTGTAGGTTGACACCAGCAAAGACTCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR GCA 90 bp ATCAGAGAAAATGGCTTTGCTCACTACTCTAGCTCGGTTAGCAGAGTACGCAGCTACTGTCATGGAATGTaGCCACATGCCATTGGAGCG +
Preference number: 4 (lower is better)
Translates to: IRENGFAHYSSSVSRVRSYCHGM*PHAIGA
Trigger: CGCTCCAATGGCATGTGGGCACATTCCATGACAGTA...GCTGCGTACTCTGCTAACCGAGCTAGAGTAGTGAGCAAAGCCATTTTCTCTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
CDS-3UTR GCA 90 bp TCTGAGTCTTTGCTGGTGTCAACCTACAATGCCACCCTCAAGGAAAGCACAGTGAGTGAAGGCAGGCATTaGTCAATGGGTACCCAAACA +
Preference number: 4 (lower is better)
Translates to: SESLLVSTYNATLKESTVSEGRH*SMGTQT
Trigger: TGTTTGGGTACCCATTGAGCAATGCCTGCCTTCACT...CACTGTGCTTTCCTTGAGGGTGGCATTGTAGGTTGACACCAGCAAAGACTCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR GCA 90 bp AGTAGAAGGATCTCCAATGCTCAAGTCACTCTGAGTCTTTGCTGGTGTCAACCTGGTCAGGTTCCGTACTaGGATCCTCATCCACTGCTT +
Preference number: 4 (lower is better)
Translates to: SRRISNAQVTLSLCWCQPGQVPY*DPHPLL
Trigger: AAGCAGTGGATGAGGATCGCAGTACGGAACCTGACC...AGGTTGACACCAGCAAAGACTCAGAGTGACTTGAGCATTGGAGATCCTTCTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR GCA 90 bp TCCCCACAGGTACTGAATATGTATCCTGGCACAAATCATCAGCACAACACAGGAGGTCAGGTTCCGTACTaGGATCCTCATCCACTGCTT +
Preference number: 4 (lower is better)
Translates to: SPQVLNMYPGTNHQHNTGGQVPY*DPHPLL
Trigger: AAGCAGTGGATGAGGATCGCAGTACGGAACCTGACC...TCCTGTGTTGTGCTGATGATTTGTGCCAGGATACATATTCAGTACCTGTGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000423243.6
ENST00000540606.6
CDS-3UTR GCA 90 bp ATCAGAGAAAATGGCTTTGCTCACTACTCTAGCTCGGTTAGCAGAGTACGCAGCGGTGTCAACCTACAATaGCACCCTCAAGGAAAGCAC +
Preference number: 4 (lower is better)
Translates to: IRENGFAHYSSSVSRVRSGVNLQ*HPQGKH
Trigger: GTGCTTTCCTTGAGGGTGGCATTGTAGGTTGACACC...GCTGCGTACTCTGCTAACCGAGCTAGAGTAGTGAGCAAAGCCATTTTCTCTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR GCA 90 bp CAGCACCTTGGCAGGTGTGACACACACACTCTGAATGAAGAAATGCGGCTGACTATCTCTCAGCTAGACTaGTGGTCAAGTAACAAGGTG +
Preference number: 4 (lower is better)
Translates to: QHLGRCDTHTLNEEMRLTISQLD*WSSNKV
Trigger: CACCTTGTTACTTGACCAGCAGTCTAGCTGAGAGAT...AGTCAGCCGCATTTCTTCATTCAGAGTGTGTGTGTCACACCTGCCAAGGTGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CCA 90 bp GGGTCCTCAAAGGAGACAGGTACTAACCTCACCTCTAACTTGTGTGATGCATTCATCAGCCCCTTTGCCTaGCTTAGGAACTGTGTGAAC +
Preference number: 4 (lower is better)
Translates to: GSSKETGTNLTSNLCDAFISPFA*LRNCVN
Trigger: GTTCACACAGTTCCTAAGCCAGGCAAAGGGGCTGAT...GAATGCATCACACAAGTTAGAGGTGAGGTTAGTACCTGTCTCCTTTGAGGACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423243.6
CDS-3UTR CCA 90 bp TCTGAGTCTTTGCTGGTGTCAACCTACAATGCCACCCTCAAGGAAAGCACAGTGTGGAAACAAAGATGGTaGGTGACCTTGAGCCTGGAA +
Preference number: 4 (lower is better)
Translates to: SESLLVSTYNATLKESTVWKQRW*VTLSLE
Trigger: TTCCAGGCTCAAGGTCACCCACCATCTTTGTTTCCA...CACTGTGCTTTCCTTGAGGGTGGCATTGTAGGTTGACACCAGCAAAGACTCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CCA 90 bp ATCAGAGAAAATGGCTTTGCTCACTACTCTAGCTCGGTTAGCAGAGTACGCAGCTGGTGGAAACAAAGATaGTGGGTGACCTTGAGCCTG +
Preference number: 4 (lower is better)
Translates to: IRENGFAHYSSSVSRVRSWWKQR*WVTLSL
Trigger: CAGGCTCAAGGTCACCCACCATCTTTGTTTCCACCA...GCTGCGTACTCTGCTAACCGAGCTAGAGTAGTGAGCAAAGCCATTTTCTCTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CCA 90 bp GGGTCCTCAAAGGAGACAGGTACTAACCTCACCTCTAACTTGTGTGATGCATTCTGGTGGAAACAAAGATaGTGGGTGACCTTGAGCCTG +
Preference number: 4 (lower is better)
Translates to: GSSKETGTNLTSNLCDAFWWKQR*WVTLSL
Trigger: CAGGCTCAAGGTCACCCACCATCTTTGTTTCCACCA...GAATGCATCACACAAGTTAGAGGTGAGGTTAGTACCTGTCTCCTTTGAGGACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423243.6
CDS-3UTR CCA 90 bp CAGCACCTTGGCAGGTGTGACACACACACTCTGAATGAAGAAATGCGGCTGACTGCAGGCATTGCTCAATaGGTACCCAAACATATGTCT +
Preference number: 4 (lower is better)
Translates to: QHLGRCDTHTLNEEMRLTAGIAQ*VPKHMS
Trigger: AGACATATGTTTGGGTACCCATTGAGCAATGCCTGC...AGTCAGCCGCATTTCTTCATTCAGAGTGTGTGTGTCACACCTGCCAAGGTGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CCA 90 bp TCCCCACAGGTACTGAATATGTATCCTGGCACAAATCATCAGCACAACACAGGACTCATCCACTGCTTCTaGGTCCTGGTTGAAACGGCA +
Preference number: 4 (lower is better)
Translates to: SPQVLNMYPGTNHQHNTGLIHCF*VLVETA
Trigger: TGCCGTTTCAACCAGGACCCAGAAGCAGTGGATGAG...TCCTGTGTTGTGCTGATGATTTGTGCCAGGATACATATTCAGTACCTGTGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000423243.6
ENST00000540606.6
CDS-3UTR CCA 90 bp CCCACAGGTACTGAATATGTATCCTGGCACAAATCATCAGCACAACACAGGAACCTCATCCACTGCTTCTaGGTCCTGGTTGAAACGGCA +
Preference number: 4 (lower is better)
Translates to: PTGTEYVSWHKSSAQHRNLIHCF*VLVETA
Trigger: TGCCGTTTCAACCAGGACCCAGAAGCAGTGGATGAG...GTTCCTGTGTTGTGCTGATGATTTGTGCCAGGATACATATTCAGTACCTGTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000423243.6
ENST00000540606.6
CDS-3UTR CCA 90 bp CATGCTAATCACAAAGACAAATGGAGGGAAGATACAGTGATAACACCAAGTTGGTCTGCCCCACCAGGCTaGCGTACTGCAGAACAGCAG +
Preference number: 4 (lower is better)
Translates to: HANHKDKWREDTVITPSWSAPPG*RTAEQQ
Trigger: CTGCTGTTCTGCAGTACGCCAGCCTGGTGGGGCAGA...CCAACTTGGTGTTATCACTGTATCTTCCCTCCATTTGTCTTTGTGATTAGCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CCA 90 bp GCTTTGCTCACTACTCTAGCTCGGTTAGCAGAGTACGCAGCACCTTGGCAGGTGACTGTCCTGAACAAATaGATACCTGATGCTAACACA +
Preference number: 4 (lower is better)
Translates to: ALLTTLARLAEYAAPWQVTVLNK*IPDANT
Trigger: TGTGTTAGCATCAGGTATCCATTTGTTCAGGACAGT...CACCTGCCAAGGTGCTGCGTACTCTGCTAACCGAGCTAGAGTAGTGAGCAAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CCA 90 bp TCTGAGTCTTTGCTGGTGTCAACCTACAATGCCACCCTCAAGGAAAGCACAGTGTCTCAGCTAGACTGCTaGTCAAGTAACAAGGTGGGT +
Preference number: 4 (lower is better)
Translates to: SESLLVSTYNATLKESTVSQLDC*SSNKVG
Trigger: ACCCACCTTGTTACTTGACCAGCAGTCTAGCTGAGA...CACTGTGCTTTCCTTGAGGGTGGCATTGTAGGTTGACACCAGCAAAGACTCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CCA 90 bp CTGCTGTTTCTTATAAACACCGTAAGGCATGATGGCTCTCTTGTGAAACACCTGCCCACATTCATCGGGTaGATCCTGGTGTATGGCCAC +
Preference number: 4 (lower is better)
Translates to: LLFLINTVRHDGSLVKHLPTFIG*ILVYGH
Trigger: GTGGCCATACACCAGGATCCACCCGATGAATGTGGG...CAGGTGTTTCACAAGAGAGCCATCATGCCTTACGGTGTTTATAAGAAACAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423243.6
CDS-3UTR TCA 90 bp TCCCCACAGGTACTGAATATGTATCCTGGCACAAATCATCAGCACAACACAGGACTCTGCCTCCAAGGGTaGACTGCAAAGGAATCTTGT +
Preference number: 4 (lower is better)
Translates to: SPQVLNMYPGTNHQHNTGLCLQG*TAKESC
Trigger: ACAAGATTCCTTTGCAGTTCACCCTTGGAGGCAGAG...TCCTGTGTTGTGCTGATGATTTGTGCCAGGATACATATTCAGTACCTGTGGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000423243.6
ENST00000540606.6
CDS-3UTR TCA 90 bp CTGCTGTTTCTTATAAACACCGTAAGGCATGATGGCTCTCTTGTGAAACACCTGCTTCTGGGTCCTGGTTaGAACGGCAGTACTTGGAGT +
Preference number: 4 (lower is better)
Translates to: LLFLINTVRHDGSLVKHLLLGPG*NGSTWS
Trigger: ACTCCAAGTACTGCCGTTTCAACCAGGACCCAGAAG...CAGGTGTTTCACAAGAGAGCCATCATGCCTTACGGTGTTTATAAGAAACAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423243.6
CDS-3UTR TCA 90 bp CTCCAATGCTCAAGTCACTCTGAGTCTTTGCTGGTGTCAACCTACAATGCCACCTTTCCCCACAGGTACTaGATATGTATCCTGGCACAA +
Preference number: 4 (lower is better)
Translates to: LQCSSHSESLLVSTYNATFPHRY*ICILAQ
Trigger: TTGTGCCAGGATACATATTCAGTACCTGTGGGGAAA...GGTGGCATTGTAGGTTGACACCAGCAAAGACTCAGAGTGACTTGAGCATTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR TCA 90 bp CAGCACCTTGGCAGGTGTGACACACACACTCTGAATGAAGAAATGCGGCTGACTAGGCTCTATAGATTCTaGAGGCAGTTCCAAGTAAGT +
Preference number: 4 (lower is better)
Translates to: QHLGRCDTHTLNEEMRLTRLYRF*RQFQVS
Trigger: ACTTACTTGGAACTGCCTTCAGAATCTATAGAGCCT...AGTCAGCCGCATTTCTTCATTCAGAGTGTGTGTGTCACACCTGCCAAGGTGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR TCA 90 bp ATCAGAGAAAATGGCTTTGCTCACTACTCTAGCTCGGTTAGCAGAGTACGCAGCATGCTCAAGTCACTCTaGGTCTTTGCTGGTGTCAAC +
Preference number: 4 (lower is better)
Translates to: IRENGFAHYSSSVSRVRSMLKSL*VFAGVN
Trigger: GTTGACACCAGCAAAGACTCAGAGTGACTTGAGCAT...GCTGCGTACTCTGCTAACCGAGCTAGAGTAGTGAGCAAAGCCATTTTCTCTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR GCA 90 bp CATGCTAATCACAAAGACAAATGGAGGGAAGATACAGTGATAACACCAAGTTGGTGCCCGACTCGTTCTTaGAGTAGCCGCAGCGGTAGA +
Preference number: 4 (lower is better)
Translates to: HANHKDKWREDTVITPSWCPTRS*SSRSGR
Trigger: TCTACCGCTGCGGCTACTGCAAGAACGAGTCGGGCA...CCAACTTGGTGTTATCACTGTATCTTCCCTCCATTTGTCTTTGTGATTAGCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
CDS-3UTR GCA 90 bp AGTAGAAGGATCTCCAATGCTCAAGTCACTCTGAGTCTTTGCTGGTGTCAACCTTACTGTCATGGAATGTaGCCACATGCCATTGGAGCG +
Preference number: 4 (lower is better)
Translates to: SRRISNAQVTLSLCWCQPYCHGM*PHAIGA
Trigger: CGCTCCAATGGCATGTGGGCACATTCCATGACAGTA...AGGTTGACACCAGCAAAGACTCAGAGTGACTTGAGCATTGGAGATCCTTCTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
CDS-3UTR GCA 90 bp ATCAGAGAAAATGGCTTTGCTCACTACTCTAGCTCGGTTAGCAGAGTACGCAGCAGTGAAGGCAGGCATTaGTCAATGGGTACCCAAACA +
Preference number: 4 (lower is better)
Translates to: IRENGFAHYSSSVSRVRSSEGRH*SMGTQT
Trigger: TGTTTGGGTACCCATTGAGCAATGCCTGCCTTCACT...GCTGCGTACTCTGCTAACCGAGCTAGAGTAGTGAGCAAAGCCATTTTCTCTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR GCA 90 bp CATGCTAATCACAAAGACAAATGGAGGGAAGATACAGTGATAACACCAAGTTGGACCAGGCTGGCGTACTaGAGAACAGCAGCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: HANHKDKWREDTVITPSWTRLAY*RTAASS
Trigger: TGAGGAGGCTGCTGTTCTGCAGTACGCCAGCCTGGT...CCAACTTGGTGTTATCACTGTATCTTCCCTCCATTTGTCTTTGTGATTAGCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR GCA 90 bp CATGCTAATCACAAAGACAAATGGAGGGAAGATACAGTGATAACACCAAGTTGGGAGGGGGCTGGCCTCTaGTCTGAGTTACTAAGGGTG +
Preference number: 4 (lower is better)
Translates to: HANHKDKWREDTVITPSWEGAGL*SELLRV
Trigger: CACCCTTAGTAACTCAGAGCAGAGGCCAGCCCCCTC...CCAACTTGGTGTTATCACTGTATCTTCCCTCCATTTGTCTTTGTGATTAGCATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR GCA 90 bp AGTAGAAGGATCTCCAATGCTCAAGTCACTCTGAGTCTTTGCTGGTGTCAACCTGGTGTCAACCTACAATaGCACCCTCAAGGAAAGCAC +
Preference number: 4 (lower is better)
Translates to: SRRISNAQVTLSLCWCQPGVNLQ*HPQGKH
Trigger: GTGCTTTCCTTGAGGGTGGCATTGTAGGTTGACACC...AGGTTGACACCAGCAAAGACTCAGAGTGACTTGAGCATTGGAGATCCTTCTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR GCA 90 bp CTCCAATGCTCAAGTCACTCTGAGTCTTTGCTGGTGTCAACCTACAATGCCACCGTCACTCTGAGTCTTTaGTGGTGTCAACCTACAATG +
Preference number: 4 (lower is better)
Translates to: LQCSSHSESLLVSTYNATVTLSL*WCQPTM
Trigger: CATTGTAGGTTGACACCAGCAAAGACTCAGAGTGAC...GGTGGCATTGTAGGTTGACACCAGCAAAGACTCAGAGTGACTTGAGCATTGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CCA 90 bp AGTAGAAGGATCTCCAATGCTCAAGTCACTCTGAGTCTTTGCTGGTGTCAACCTATCAGCCCCTTTGCCTaGCTTAGGAACTGTGTGAAC +
Preference number: 4 (lower is better)
Translates to: SRRISNAQVTLSLCWCQPISPFA*LRNCVN
Trigger: GTTCACACAGTTCCTAAGCCAGGCAAAGGGGCTGAT...AGGTTGACACCAGCAAAGACTCAGAGTGACTTGAGCATTGGAGATCCTTCTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CCA 90 bp CTGGGTCCTCAAAGGAGACAGGTACTAACCTCACCTCTAACTTGTGTGATGCATTGGAAACAAAGATGGTaGGTGACCTTGAGCCTGGAA +
Preference number: 4 (lower is better)
Translates to: LGPQRRQVLTSPLTCVMHWKQRW*VTLSLE
Trigger: TTCCAGGCTCAAGGTCACCCACCATCTTTGTTTCCA...ATGCATCACACAAGTTAGAGGTGAGGTTAGTACCTGTCTCCTTTGAGGACCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423243.6
CDS-3UTR CCA 90 bp AGTAGAAGGATCTCCAATGCTCAAGTCACTCTGAGTCTTTGCTGGTGTCAACCTTGGTGGAAACAAAGATaGTGGGTGACCTTGAGCCTG +
Preference number: 4 (lower is better)
Translates to: SRRISNAQVTLSLCWCQPWWKQR*WVTLSL
Trigger: CAGGCTCAAGGTCACCCACCATCTTTGTTTCCACCA...AGGTTGACACCAGCAAAGACTCAGAGTGACTTGAGCATTGGAGATCCTTCTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CCA 90 bp CTCCAATGCTCAAGTCACTCTGAGTCTTTGCTGGTGTCAACCTACAATGCCACCGGTTGGCGTATCAGGTaGGTTCTTGTGAATAACCAT +
Preference number: 4 (lower is better)
Translates to: LQCSSHSESLLVSTYNATGWRIR*VLVNNH
Trigger: ATGGTTATTCACAAGAACCCACCTGATACGCCAACC...GGTGGCATTGTAGGTTGACACCAGCAAAGACTCAGAGTGACTTGAGCATTGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224652.11
CDS-3UTR CCA 90 bp TCCCCACAGGTACTGAATATGTATCCTGGCACAAATCATCAGCACAACACAGGAGAACTGGCTTTCGGTTaGCGTATCAGGTGGGTTCTT +
Preference number: 4 (lower is better)
Translates to: SPQVLNMYPGTNHQHNTGELAFG*RIRWVL
Trigger: AAGAACCCACCTGATACGCCAACCGAAAGCCAGTTC...TCCTGTGTTGTGCTGATGATTTGTGCCAGGATACATATTCAGTACCTGTGGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224652.11
CDS-3UTR CCA 90 bp CCCACAGGTACTGAATATGTATCCTGGCACAAATCATCAGCACAACACAGGAACACTGCTTCTGGGTCCTaGTTGAAACGGCAGTACTTG +
Preference number: 4 (lower is better)
Translates to: PTGTEYVSWHKSSAQHRNTASGS*LKRQYL
Trigger: CAAGTACTGCCGTTTCAACCAGGACCCAGAAGCAGT...GTTCCTGTGTTGTGCTGATGATTTGTGCCAGGATACATATTCAGTACCTGTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000423243.6
ENST00000540606.6
CDS-3UTR CCA 90 bp GCTTTGCTCACTACTCTAGCTCGGTTAGCAGAGTACGCAGCACCTTGGCAGGTGACTGAATATGTATCCTaGCACAAATCATCAGCACAA +
Preference number: 4 (lower is better)
Translates to: ALLTTLARLAEYAAPWQVTEYVS*HKSSAQ
Trigger: TTGTGCTGATGATTTGTGCCAGGATACATATTCAGT...CACCTGCCAAGGTGCTGCGTACTCTGCTAACCGAGCTAGAGTAGTGAGCAAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CCA 90 bp AGTAGAAGGATCTCCAATGCTCAAGTCACTCTGAGTCTTTGCTGGTGTCAACCTTGCCACCTTGACAGGTaGGCAAAGGACTCAGCAAAA +
Preference number: 4 (lower is better)
Translates to: SRRISNAQVTLSLCWCQPCHLDR*AKDSAK
Trigger: TTTTGCTGAGTCCTTTGCCCACCTGTCAAGGTGGCA...AGGTTGACACCAGCAAAGACTCAGAGTGACTTGAGCATTGGAGATCCTTCTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CCA 90 bp CCCACAGGTACTGAATATGTATCCTGGCACAAATCATCAGCACAACACAGGAACTGCCACCTTGACAGGTaGGCAAAGGACTCAGCAAAA +
Preference number: 4 (lower is better)
Translates to: PTGTEYVSWHKSSAQHRNCHLDR*AKDSAK
Trigger: TTTTGCTGAGTCCTTTGCCCACCTGTCAAGGTGGCA...GTTCCTGTGTTGTGCTGATGATTTGTGCCAGGATACATATTCAGTACCTGTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CCA 90 bp TCTGAGTCTTTGCTGGTGTCAACCTACAATGCCACCCTCAAGGAAAGCACAGTGACTCTGAGTCTTTGCTaGTGTCAACCTACAATGCCA +
Preference number: 4 (lower is better)
Translates to: SESLLVSTYNATLKESTVTLSLC*CQPTMP
Trigger: TGGCATTGTAGGTTGACACCAGCAAAGACTCAGAGT...CACTGTGCTTTCCTTGAGGGTGGCATTGTAGGTTGACACCAGCAAAGACTCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CCA 90 bp AGTAGAAGGATCTCCAATGCTCAAGTCACTCTGAGTCTTTGCTGGTGTCAACCTAGACGACTTGAACTCTaGGTCCTCAAAGGAGACAGG +
Preference number: 4 (lower is better)
Translates to: SRRISNAQVTLSLCWCQPRRLEL*VLKGDR
Trigger: CCTGTCTCCTTTGAGGACCCAGAGTTCAAGTCGTCT...AGGTTGACACCAGCAAAGACTCAGAGTGACTTGAGCATTGGAGATCCTTCTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369043.8
ENST00000540606.6
CDS-3UTR TCA 90 bp TCTGAGTCTTTGCTGGTGTCAACCTACAATGCCACCCTCAAGGAAAGCACAGTGGGCTTAGGAACTGTGTaGACTTTAACTGAATGTGAC +
Preference number: 4 (lower is better)
Translates to: SESLLVSTYNATLKESTVGLGTV*TLTECD
Trigger: GTCACATTCAGTTAAAGTTCACACAGTTCCTAAGCC...CACTGTGCTTTCCTTGAGGGTGGCATTGTAGGTTGACACCAGCAAAGACTCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR TCA 90 bp CAGCACCTTGGCAGGTGTGACACACACACTCTGAATGAAGAAATGCGGCTGACTGTACAAATACACAGATaGTACACAGTTTGGGAGGAT +
Preference number: 4 (lower is better)
Translates to: QHLGRCDTHTLNEEMRLTVQIHR*YTVWED
Trigger: ATCCTCCCAAACTGTGTATCATCTGTGTATTTGTAC...AGTCAGCCGCATTTCTTCATTCAGAGTGTGTGTGTCACACCTGCCAAGGTGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR TCA 90 bp GGGTCCTCAAAGGAGACAGGTACTAACCTCACCTCTAACTTGTGTGATGCATTCCTTGGAGTTTTCAAGTaGAGGCAGGCATTGCTCAAT +
Preference number: 4 (lower is better)
Translates to: GSSKETGTNLTSNLCDAFLGVFK*RQALLN
Trigger: ATTGAGCAATGCCTGCCTTCACTTGAAAACTCCAAG...GAATGCATCACACAAGTTAGAGGTGAGGTTAGTACCTGTCTCCTTTGAGGACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423243.6
CDS-3UTR TCA 90 bp CCCACAGGTACTGAATATGTATCCTGGCACAAATCATCAGCACAACACAGGAACCTAATTTGTGGGTGGTaGCAGTTATTTCCCCACAGG +
Preference number: 4 (lower is better)
Translates to: PTGTEYVSWHKSSAQHRNLICGW*QLFPHR
Trigger: CCTGTGGGGAAATAACTGTCACCACCCACAAATTAG...GTTCCTGTGTTGTGCTGATGATTTGTGCCAGGATACATATTCAGTACCTGTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000423243.6
ENST00000540606.6
CDS-3UTR TCA 90 bp TCCCCACAGGTACTGAATATGTATCCTGGCACAAATCATCAGCACAACACAGGACTAATTTGTGGGTGGTaGCAGTTATTTCCCCACAGG +
Preference number: 4 (lower is better)
Translates to: SPQVLNMYPGTNHQHNTGLICGW*QLFPHR
Trigger: CCTGTGGGGAAATAACTGTCACCACCCACAAATTAG...TCCTGTGTTGTGCTGATGATTTGTGCCAGGATACATATTCAGTACCTGTGGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000423243.6
ENST00000540606.6
CDS-3UTR TCA 90 bp AGTAGAAGGATCTCCAATGCTCAAGTCACTCTGAGTCTTTGCTGGTGTCAACCTCTAATTTGTGGGTGGTaGCAGTTATTTCCCCACAGG +
Preference number: 4 (lower is better)
Translates to: SRRISNAQVTLSLCWCQPLICGW*QLFPHR
Trigger: CCTGTGGGGAAATAACTGTCACCACCCACAAATTAG...AGGTTGACACCAGCAAAGACTCAGAGTGACTTGAGCATTGGAGATCCTTCTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR TCA 90 bp CTCCAATGCTCAAGTCACTCTGAGTCTTTGCTGGTGTCAACCTACAATGCCACCGAACAGAGGTCGGAATaGTTCCTTCTTCAATGTGAT +
Preference number: 4 (lower is better)
Translates to: LQCSSHSESLLVSTYNATEQRSE*FLLQCD
Trigger: ATCACATTGAAGAAGGAATCATTCCGACCTCTGTTC...GGTGGCATTGTAGGTTGACACCAGCAAAGACTCAGAGTGACTTGAGCATTGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR TCA 90 bp TCCCCACAGGTACTGAATATGTATCCTGGCACAAATCATCAGCACAACACAGGACACACACACTCTGAATaGAGAAATGCGGCTGACTTG +
Preference number: 4 (lower is better)
Translates to: SPQVLNMYPGTNHQHNTGHTHSE*RNAADL
Trigger: CAAGTCAGCCGCATTTCTTCATTCAGAGTGTGTGTG...TCCTGTGTTGTGCTGATGATTTGTGCCAGGATACATATTCAGTACCTGTGGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR TCA 90 bp CCCACAGGTACTGAATATGTATCCTGGCACAAATCATCAGCACAACACAGGAACATGCTCAAGTCACTCTaGGTCTTTGCTGGTGTCAAC +
Preference number: 4 (lower is better)
Translates to: PTGTEYVSWHKSSAQHRNMLKSL*VFAGVN
Trigger: GTTGACACCAGCAAAGACTCAGAGTGACTTGAGCAT...GTTCCTGTGTTGTGCTGATGATTTGTGCCAGGATACATATTCAGTACCTGTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR TCA 90 bp CTCCAATGCTCAAGTCACTCTGAGTCTTTGCTGGTGTCAACCTACAATGCCACCGTGGGTCACTTTTCTTaGCTATGCTTTTCTAGTCCA +
Preference number: 4 (lower is better)
Translates to: LQCSSHSESLLVSTYNATVGHFS*LCFSSP
Trigger: TGGACTAGAAAAGCATAGTCAAGAAAAGTGACCCAC...GGTGGCATTGTAGGTTGACACCAGCAAAGACTCAGAGTGACTTGAGCATTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR TCA 90 bp ATCAGAGAAAATGGCTTTGCTCACTACTCTAGCTCGGTTAGCAGAGTACGCAGCGGTAGCAAGGGGAATTaGAATTACATCTTTGCTCCC +
Preference number: 4 (lower is better)
Translates to: IRENGFAHYSSSVSRVRSGSKGN*NYIFAP
Trigger: GGGAGCAAAGATGTAATTTCAATTCCCCTTGCTACC...GCTGCGTACTCTGCTAACCGAGCTAGAGTAGTGAGCAAAGCCATTTTCTCTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR TCA 90 bp CAGCACCTTGGCAGGTGTGACACACACACTCTGAATGAAGAAATGCGGCTGACTTGGCCACTTGATACTTaGCATACAAAGAAAAGGACT +
Preference number: 4 (lower is better)
Translates to: QHLGRCDTHTLNEEMRLTWPLDT*HTKKRT
Trigger: AGTCCTTTTCTTTGTATGTCAAGTATCAAGTGGCCA...AGTCAGCCGCATTTCTTCATTCAGAGTGTGTGTGTCACACCTGCCAAGGTGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369043.8
ENST00000540606.6
CDS-3UTR TCA 90 bp CAGCACCTTGGCAGGTGTGACACACACACTCTGAATGAAGAAATGCGGCTGACTTGGTGTATGGCCACTTaGTACTTGACATACAAAGAA +
Preference number: 4 (lower is better)
Translates to: QHLGRCDTHTLNEEMRLTWCMAT*YLTYKE
Trigger: TTCTTTGTATGTCAAGTATCAAGTGGCCATACACCA...AGTCAGCCGCATTTCTTCATTCAGAGTGTGTGTGTCACACCTGCCAAGGTGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369043.8
ENST00000540606.6
CDS-3UTR TCA 90 bp GATCAATACACTAGCTATTCTCAAACCAACATAATGCATGAATACAGCAGCCAAAGTGGTAGCCGGCCCTaGGGCCCTTGTATTCCACCA +
Preference number: 4 (lower is better)
Translates to: DQYTSYSQTNIMHEYSSQSGSRP*GPCIPP
Trigger: TGGTGGAATACAAGGGCCTCAGGGCCGGCTACCACT...TTGGCTGCTGTATTCATGCATTATGTTGGTTTGAGAATAGCTAGTGTATTGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540606.6
CDS-3UTR GCA 90 bp CAGCACCTTGGCAGGTGTGACACACACACTCTGAATGAAGAAATGCGGCTGACTCAGTTTATTTATCAATaGAAAGTCACCCGCAACAGC +
Preference number: 4 (lower is better)
Translates to: QHLGRCDTHTLNEEMRLTQFIYQ*KVTRNS
Trigger: GCTGTTGCGGGTGACTTTGCATTGATAAATAAACTG...AGTCAGCCGCATTTCTTCATTCAGAGTGTGTGTGTCACACCTGCCAAGGTGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR GCA 90 bp TCTGAGTCTTTGCTGGTGTCAACCTACAATGCCACCCTCAAGGAAAGCACAGTGTTTCCGGATTTCCTTTaGTTTTCGACATGGAGGCTT +
Preference number: 4 (lower is better)
Translates to: SESLLVSTYNATLKESTVFPDFL*FSTWRL
Trigger: AAGCCTCCATGTCGAAAAGCAAAGGAAATCCGGAAA...CACTGTGCTTTCCTTGAGGGTGGCATTGTAGGTTGACACCAGCAAAGACTCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR GCA 90 bp CTCCAATGCTCAAGTCACTCTGAGTCTTTGCTGGTGTCAACCTACAATGCCACCCCAGCTGGGTTCTGCTaGATTAGTTTTAACCTTTTC +
Preference number: 4 (lower is better)
Translates to: LQCSSHSESLLVSTYNATPAGFC*ISFNLF
Trigger: GAAAAGGTTAAAACTAATGCAGCAGAACCCAGCTGG...GGTGGCATTGTAGGTTGACACCAGCAAAGACTCAGAGTGACTTGAGCATTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR GCA 90 bp CTCCAATGCTCAAGTCACTCTGAGTCTTTGCTGGTGTCAACCTACAATGCCACCTCTCCAGCTGGGTTCTaGTGCATTAGTTTTAACCTT +
Preference number: 4 (lower is better)
Translates to: LQCSSHSESLLVSTYNATSPAGF*CISFNL
Trigger: AAGGTTAAAACTAATGCAGCAGAACCCAGCTGGAGA...GGTGGCATTGTAGGTTGACACCAGCAAAGACTCAGAGTGACTTGAGCATTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR GCA 90 bp TCCCCACAGGTACTGAATATGTATCCTGGCACAAATCATCAGCACAACACAGGAAGTGAAGGCAGGCATTaGTCAATGGGTACCCAAACA +
Preference number: 4 (lower is better)
Translates to: SPQVLNMYPGTNHQHNTGSEGRH*SMGTQT
Trigger: TGTTTGGGTACCCATTGAGCAATGCCTGCCTTCACT...TCCTGTGTTGTGCTGATGATTTGTGCCAGGATACATATTCAGTACCTGTGGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000423243.6
ENST00000540606.6
CDS-3UTR GCA 90 bp CAGCACCTTGGCAGGTGTGACACACACACTCTGAATGAAGAAATGCGGCTGACTCTTACGAGACTACTTTaGAGGTCAAAATCCCAGAAA +
Preference number: 4 (lower is better)
Translates to: QHLGRCDTHTLNEEMRLTLTRLL*RSKSQK
Trigger: TTTCTGGGATTTTGACCTGCAAAGTAGTCTCGTAAG...AGTCAGCCGCATTTCTTCATTCAGAGTGTGTGTGTCACACCTGCCAAGGTGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CCA 90 bp TCCCCACAGGTACTGAATATGTATCCTGGCACAAATCATCAGCACAACACAGGACAGCATCATCCATTGTaGAATCCATGGGCTCATCCT +
Preference number: 4 (lower is better)
Translates to: SPQVLNMYPGTNHQHNTGQHHPL*NPWAHP
Trigger: AGGATGAGCCCATGGATTCCACAATGGATGATGCTG...TCCTGTGTTGTGCTGATGATTTGTGCCAGGATACATATTCAGTACCTGTGGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000423243.6
ENST00000540606.6
CDS-3UTR CCA 90 bp CCCACAGGTACTGAATATGTATCCTGGCACAAATCATCAGCACAACACAGGAACCAGCATCATCCATTGTaGAATCCATGGGCTCATCCT +
Preference number: 4 (lower is better)
Translates to: PTGTEYVSWHKSSAQHRNQHHPL*NPWAHP
Trigger: AGGATGAGCCCATGGATTCCACAATGGATGATGCTG...GTTCCTGTGTTGTGCTGATGATTTGTGCCAGGATACATATTCAGTACCTGTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000423243.6
ENST00000540606.6
CDS-3UTR CCA 90 bp AGTAGAAGGATCTCCAATGCTCAAGTCACTCTGAGTCTTTGCTGGTGTCAACCTCAGCATCATCCATTGTaGAATCCATGGGCTCATCCT +
Preference number: 4 (lower is better)
Translates to: SRRISNAQVTLSLCWCQPQHHPL*NPWAHP
Trigger: AGGATGAGCCCATGGATTCCACAATGGATGATGCTG...AGGTTGACACCAGCAAAGACTCAGAGTGACTTGAGCATTGGAGATCCTTCTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CCA 90 bp AGTAGAAGGATCTCCAATGCTCAAGTCACTCTGAGTCTTTGCTGGTGTCAACCTTGGAAACAAAGATGGTaGGTGACCTTGAGCCTGGAA +
Preference number: 4 (lower is better)
Translates to: SRRISNAQVTLSLCWCQPWKQRW*VTLSLE
Trigger: TTCCAGGCTCAAGGTCACCCACCATCTTTGTTTCCA...AGGTTGACACCAGCAAAGACTCAGAGTGACTTGAGCATTGGAGATCCTTCTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CCA 90 bp CAGCACCTTGGCAGGTGTGACACACACACTCTGAATGAAGAAATGCGGCTGACTACTGTCCTGAACAAATaGATACCTGATGCTAACACA +
Preference number: 4 (lower is better)
Translates to: QHLGRCDTHTLNEEMRLTTVLNK*IPDANT
Trigger: TGTGTTAGCATCAGGTATCCATTTGTTCAGGACAGT...AGTCAGCCGCATTTCTTCATTCAGAGTGTGTGTGTCACACCTGCCAAGGTGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CCA 90 bp GCTTTGCTCACTACTCTAGCTCGGTTAGCAGAGTACGCAGCACCTTGGCAGGTGGACACTTTGACTACTTaGATCAATACACTAGCTATT +
Preference number: 4 (lower is better)
Translates to: ALLTTLARLAEYAAPWQVDTLTT*INTLAI
Trigger: AATAGCTAGTGTATTGATCCAAGTAGTCAAAGTGTC...CACCTGCCAAGGTGCTGCGTACTCTGCTAACCGAGCTAGAGTAGTGAGCAAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CCA 90 bp TCTGAGTCTTTGCTGGTGTCAACCTACAATGCCACCCTCAAGGAAAGCACAGTGCAGTATTCACTCAGCTaGGGCTCAAAAGGACAAATA +
Preference number: 4 (lower is better)
Translates to: SESLLVSTYNATLKESTVQYSLS*GSKGQI
Trigger: TATTTGTCCTTTTGAGCCCCAGCTGAGTGAATACTG...CACTGTGCTTTCCTTGAGGGTGGCATTGTAGGTTGACACCAGCAAAGACTCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CCA 90 bp TCCCCACAGGTACTGAATATGTATCCTGGCACAAATCATCAGCACAACACAGGATCTCAGCTAGACTGCTaGTCAAGTAACAAGGTGGGT +
Preference number: 4 (lower is better)
Translates to: SPQVLNMYPGTNHQHNTGSQLDC*SSNKVG
Trigger: ACCCACCTTGTTACTTGACCAGCAGTCTAGCTGAGA...TCCTGTGTTGTGCTGATGATTTGTGCCAGGATACATATTCAGTACCTGTGGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR TCA 90 bp ATCAGAGAAAATGGCTTTGCTCACTACTCTAGCTCGGTTAGCAGAGTACGCAGCGGCTTAGGAACTGTGTaGACTTTAACTGAATGTGAC +
Preference number: 4 (lower is better)
Translates to: IRENGFAHYSSSVSRVRSGLGTV*TLTECD
Trigger: GTCACATTCAGTTAAAGTTCACACAGTTCCTAAGCC...GCTGCGTACTCTGCTAACCGAGCTAGAGTAGTGAGCAAAGCCATTTTCTCTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR TCA 90 bp CATGCTAATCACAAAGACAAATGGAGGGAAGATACAGTGATAACACCAAGTTGGTCACCCCCACAGCAATaGTCTTTCCGTCAAGCCAGT +
Preference number: 4 (lower is better)
Translates to: HANHKDKWREDTVITPSWSPPQQ*SFRQAS
Trigger: ACTGGCTTGACGGAAAGATCATTGCTGTGGGGGTGA...CCAACTTGGTGTTATCACTGTATCTTCCCTCCATTTGTCTTTGTGATTAGCATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR TCA 90 bp TCTGAGTCTTTGCTGGTGTCAACCTACAATGCCACCCTCAAGGAAAGCACAGTGGTACAAATACACAGATaGTACACAGTTTGGGAGGAT +
Preference number: 4 (lower is better)
Translates to: SESLLVSTYNATLKESTVVQIHR*YTVWED
Trigger: ATCCTCCCAAACTGTGTATCATCTGTGTATTTGTAC...CACTGTGCTTTCCTTGAGGGTGGCATTGTAGGTTGACACCAGCAAAGACTCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR TCA 90 bp CAGCACCTTGGCAGGTGTGACACACACACTCTGAATGAAGAAATGCGGCTGACTTTTCATCTTGGGACATaGATGAATGTAGAAACCCAT +
Preference number: 4 (lower is better)
Translates to: QHLGRCDTHTLNEEMRLTFHLGT*MNVETH
Trigger: ATGGGTTTCTACATTCATTCATGTCCCAAGATGAAA...AGTCAGCCGCATTTCTTCATTCAGAGTGTGTGTGTCACACCTGCCAAGGTGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR TCA 90 bp CAGCACCTTGGCAGGTGTGACACACACACTCTGAATGAAGAAATGCGGCTGACTTCAGAAGGTCTATACTaGCCCTTATATTTCATCTTG +
Preference number: 4 (lower is better)
Translates to: QHLGRCDTHTLNEEMRLTSEGLY*PLYFIL
Trigger: CAAGATGAAATATAAGGGTCAGTATAGACCTTCTGA...AGTCAGCCGCATTTCTTCATTCAGAGTGTGTGTGTCACACCTGCCAAGGTGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR TCA 90 bp CTCTCTTGTGAAACACCTGCAATCGGTCAGGTTCCGTACTGCGATCCTCATCCATCAGAAGGTCTATACTaGCCCTTATATTTCATCTTG +
Preference number: 4 (lower is better)
Translates to: LSCETPAIGQVPYCDPHPSEGLY*PLYFIL
Trigger: CAAGATGAAATATAAGGGTCAGTATAGACCTTCTGA...TGGATGAGGATCGCAGTACGGAACCTGACCGATTGCAGGTGTTTCACAAGAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423243.6
CDS-3UTR TCA 90 bp CCCACAGGTACTGAATATGTATCCTGGCACAAATCATCAGCACAACACAGGAACCTTGGAGTTTTCAAGTaGAGGCAGGCATTGCTCAAT +
Preference number: 4 (lower is better)
Translates to: PTGTEYVSWHKSSAQHRNLGVFK*RQALLN
Trigger: ATTGAGCAATGCCTGCCTTCACTTGAAAACTCCAAG...GTTCCTGTGTTGTGCTGATGATTTGTGCCAGGATACATATTCAGTACCTGTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000423243.6
ENST00000540606.6
CDS-3UTR TCA 90 bp AGTAGAAGGATCTCCAATGCTCAAGTCACTCTGAGTCTTTGCTGGTGTCAACCTCTTGGAGTTTTCAAGTaGAGGCAGGCATTGCTCAAT +
Preference number: 4 (lower is better)
Translates to: SRRISNAQVTLSLCWCQPLGVFK*RQALLN
Trigger: ATTGAGCAATGCCTGCCTTCACTTGAAAACTCCAAG...AGGTTGACACCAGCAAAGACTCAGAGTGACTTGAGCATTGGAGATCCTTCTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR TCA 90 bp CTGCTGTTTCTTATAAACACCGTAAGGCATGATGGCTCTCTTGTGAAACACCTGATGATGGCTCTCTTGTaGAACACCTGCAATCGGTCA +
Preference number: 4 (lower is better)
Translates to: LLFLINTVRHDGSLVKHLMMALL*NTCNRS
Trigger: TGACCGATTGCAGGTGTTTCACAAGAGAGCCATCAT...CAGGTGTTTCACAAGAGAGCCATCATGCCTTACGGTGTTTATAAGAAACAGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423243.6
CDS-3UTR TCA 90 bp CCCACAGGTACTGAATATGTATCCTGGCACAAATCATCAGCACAACACAGGAACTTTCCCCACAGGTACTaGATATGTATCCTGGCACAA +
Preference number: 4 (lower is better)
Translates to: PTGTEYVSWHKSSAQHRNFPHRY*ICILAQ
Trigger: TTGTGCCAGGATACATATTCAGTACCTGTGGGGAAA...GTTCCTGTGTTGTGCTGATGATTTGTGCCAGGATACATATTCAGTACCTGTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000423243.6
ENST00000540606.6
CDS-3UTR TCA 90 bp ATCAGAGAAAATGGCTTTGCTCACTACTCTAGCTCGGTTAGCAGAGTACGCAGCAGGCTCTATAGATTCTaGAGGCAGTTCCAAGTAAGT +
Preference number: 4 (lower is better)
Translates to: IRENGFAHYSSSVSRVRSRLYRF*RQFQVS
Trigger: ACTTACTTGGAACTGCCTTCAGAATCTATAGAGCCT...GCTGCGTACTCTGCTAACCGAGCTAGAGTAGTGAGCAAAGCCATTTTCTCTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR TCA 90 bp CAGCACCTTGGCAGGTGTGACACACACACTCTGAATGAAGAAATGCGGCTGACTAGTTTTCTCTTCATCTaGTATTCAAGGGTTGTGATC +
Preference number: 4 (lower is better)
Translates to: QHLGRCDTHTLNEEMRLTSFLFI*YSRVVI
Trigger: GATCACAACCCTTGAATATCAGATGAAGAGAAAACT...AGTCAGCCGCATTTCTTCATTCAGAGTGTGTGTGTCACACCTGCCAAGGTGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR TCA 90 bp CAGCACCTTGGCAGGTGTGACACACACACTCTGAATGAAGAAATGCGGCTGACTCCTTTTAAGACACTTTaGCTACTTGGATCAATACAC +
Preference number: 4 (lower is better)
Translates to: QHLGRCDTHTLNEEMRLTPFKTL*LLGSIH
Trigger: GTGTATTGATCCAAGTAGTCAAAGTGTCTTAAAAGG...AGTCAGCCGCATTTCTTCATTCAGAGTGTGTGTGTCACACCTGCCAAGGTGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR TCA 90 bp CCCACAGGTACTGAATATGTATCCTGGCACAAATCATCAGCACAACACAGGAACGGTAGCAAGGGGAATTaGAATTACATCTTTGCTCCC +
Preference number: 4 (lower is better)
Translates to: PTGTEYVSWHKSSAQHRNGSKGN*NYIFAP
Trigger: GGGAGCAAAGATGTAATTTCAATTCCCCTTGCTACC...GTTCCTGTGTTGTGCTGATGATTTGTGCCAGGATACATATTCAGTACCTGTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR TCA 90 bp AGTAGAAGGATCTCCAATGCTCAAGTCACTCTGAGTCTTTGCTGGTGTCAACCTGGTAGCAAGGGGAATTaGAATTACATCTTTGCTCCC +
Preference number: 4 (lower is better)
Translates to: SRRISNAQVTLSLCWCQPGSKGN*NYIFAP
Trigger: GGGAGCAAAGATGTAATTTCAATTCCCCTTGCTACC...AGGTTGACACCAGCAAAGACTCAGAGTGACTTGAGCATTGGAGATCCTTCTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR TCA 90 bp TCTGAGTCTTTGCTGGTGTCAACCTACAATGCCACCCTCAAGGAAAGCACAGTGTGGTGTATGGCCACTTaGTACTTGACATACAAAGAA +
Preference number: 4 (lower is better)
Translates to: SESLLVSTYNATLKESTVWCMAT*YLTYKE
Trigger: TTCTTTGTATGTCAAGTATCAAGTGGCCATACACCA...CACTGTGCTTTCCTTGAGGGTGGCATTGTAGGTTGACACCAGCAAAGACTCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369043.8
ENST00000540606.6
CDS-3UTR GCA 90 bp ATCAGAGAAAATGGCTTTGCTCACTACTCTAGCTCGGTTAGCAGAGTACGCAGCTTTCCGGATTTCCTTTaGTTTTCGACATGGAGGCTT +
Preference number: 4 (lower is better)
Translates to: IRENGFAHYSSSVSRVRSFPDFL*FSTWRL
Trigger: AAGCCTCCATGTCGAAAAGCAAAGGAAATCCGGAAA...GCTGCGTACTCTGCTAACCGAGCTAGAGTAGTGAGCAAAGCCATTTTCTCTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR GCA 90 bp GATCAATACACTAGCTATTCTCAAACCAACATAATGCATGAATACAGCAGCCAAGAGGGGGCTGGCCTCTaGTCTGAGTTACTAAGGGTG +
Preference number: 4 (lower is better)
Translates to: DQYTSYSQTNIMHEYSSQEGAGL*SELLRV
Trigger: CACCCTTAGTAACTCAGAGCAGAGGCCAGCCCCCTC...TTGGCTGCTGTATTCATGCATTATGTTGGTTTGAGAATAGCTAGTGTATTGATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR GCA 90 bp CTCCAATGCTCAAGTCACTCTGAGTCTTTGCTGGTGTCAACCTACAATGCCACCGTACCAGCCCTACCCTaGTTATTTTTAATAATGCAG +
Preference number: 4 (lower is better)
Translates to: LQCSSHSESLLVSTYNATVPALP*LFLIMQ
Trigger: CTGCATTATTAAAAATAAGCAGGGTAGGGCTGGTAC...GGTGGCATTGTAGGTTGACACCAGCAAAGACTCAGAGTGACTTGAGCATTGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR GCA 90 bp CCCACAGGTACTGAATATGTATCCTGGCACAAATCATCAGCACAACACAGGAACGTCACTCTGAGTCTTTaGTGGTGTCAACCTACAATG +
Preference number: 4 (lower is better)
Translates to: PTGTEYVSWHKSSAQHRNVTLSL*WCQPTM
Trigger: CATTGTAGGTTGACACCAGCAAAGACTCAGAGTGAC...GTTCCTGTGTTGTGCTGATGATTTGTGCCAGGATACATATTCAGTACCTGTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR GCA 90 bp CCCACAGGTACTGAATATGTATCCTGGCACAAATCATCAGCACAACACAGGAACATCTCTCAGCTAGACTaGTGGTCAAGTAACAAGGTG +
Preference number: 4 (lower is better)
Translates to: PTGTEYVSWHKSSAQHRNISQLD*WSSNKV
Trigger: CACCTTGTTACTTGACCAGCAGTCTAGCTGAGAGAT...GTTCCTGTGTTGTGCTGATGATTTGTGCCAGGATACATATTCAGTACCTGTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR GCA 90 bp AGTAGAAGGATCTCCAATGCTCAAGTCACTCTGAGTCTTTGCTGGTGTCAACCTATCTCTCAGCTAGACTaGTGGTCAAGTAACAAGGTG +
Preference number: 4 (lower is better)
Translates to: SRRISNAQVTLSLCWCQPISQLD*WSSNKV
Trigger: CACCTTGTTACTTGACCAGCAGTCTAGCTGAGAGAT...AGGTTGACACCAGCAAAGACTCAGAGTGACTTGAGCATTGGAGATCCTTCTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CCA 90 bp TCCCCACAGGTACTGAATATGTATCCTGGCACAAATCATCAGCACAACACAGGAAATCCTGTACTGTCATaGAATGTGCCCACATGCCAT +
Preference number: 4 (lower is better)
Translates to: SPQVLNMYPGTNHQHNTGNPVLS*NVPTCH
Trigger: ATGGCATGTGGGCACATTCCATGACAGTACAGGATT...TCCTGTGTTGTGCTGATGATTTGTGCCAGGATACATATTCAGTACCTGTGGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
CDS-3UTR CCA 90 bp CCCACAGGTACTGAATATGTATCCTGGCACAAATCATCAGCACAACACAGGAACAATCCTGTACTGTCATaGAATGTGCCCACATGCCAT +
Preference number: 4 (lower is better)
Translates to: PTGTEYVSWHKSSAQHRNNPVLS*NVPTCH
Trigger: ATGGCATGTGGGCACATTCCATGACAGTACAGGATT...GTTCCTGTGTTGTGCTGATGATTTGTGCCAGGATACATATTCAGTACCTGTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
CDS-3UTR CCA 90 bp AGTAGAAGGATCTCCAATGCTCAAGTCACTCTGAGTCTTTGCTGGTGTCAACCTGGATTTAGCCTTTGGTaGAAACAAAGATGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: SRRISNAQVTLSLCWCQPGFSLW*KQRWWV
Trigger: CACCCACCATCTTTGTTTCCACCAAAGGCTAAATCC...AGGTTGACACCAGCAAAGACTCAGAGTGACTTGAGCATTGGAGATCCTTCTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CCA 90 bp CTGGGTCCTCAAAGGAGACAGGTACTAACCTCACCTCTAACTTGTGTGATGCATTCGAGTGATTTTGGCTaGTTGGATTTAGCCTTTGGT +
Preference number: 4 (lower is better)
Translates to: LGPQRRQVLTSPLTCVMHSSDFG*LDLAFG
Trigger: ACCAAAGGCTAAATCCAACCAGCCAAAATCACTCGA...ATGCATCACACAAGTTAGAGGTGAGGTTAGTACCTGTCTCCTTTGAGGACCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423243.6
CDS-3UTR CCA 90 bp ATTTTACATGCTAATCACAAAGACAAATGGAGGGAAGATACAGTGATAACACCATCTGCCCCACCAGGCTaGCGTACTGCAGAACAGCAG +
Preference number: 4 (lower is better)
Translates to: ILHANHKDKWREDTVITPSAPPG*RTAEQQ
Trigger: CTGCTGTTCTGCAGTACGCCAGCCTGGTGGGGCAGA...TGGTGTTATCACTGTATCTTCCCTCCATTTGTCTTTGTGATTAGCATGTAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CCA 90 bp TCTGAGTCTTTGCTGGTGTCAACCTACAATGCCACCCTCAAGGAAAGCACAGTGGATAAATCCCAATTATaGGGGCTAGGTCATAATGCA +
Preference number: 4 (lower is better)
Translates to: SESLLVSTYNATLKESTVDKSQL*GLGHNA
Trigger: TGCATTATGACCTAGCCCCCATAATTGGGATTTATC...CACTGTGCTTTCCTTGAGGGTGGCATTGTAGGTTGACACCAGCAAAGACTCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CCA 90 bp TCCCCACAGGTACTGAATATGTATCCTGGCACAAATCATCAGCACAACACAGGATCAAGGAAAGCACAGTaGTTCACAGACAGGGATGAT +
Preference number: 4 (lower is better)
Translates to: SPQVLNMYPGTNHQHNTGSRKAQ*FTDRDD
Trigger: ATCATCCCTGTCTGTGAACCACTGTGCTTTCCTTGA...TCCTGTGTTGTGCTGATGATTTGTGCCAGGATACATATTCAGTACCTGTGGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CCA 90 bp CTCCAATGCTCAAGTCACTCTGAGTCTTTGCTGGTGTCAACCTACAATGCCACCGGTCAAGTAACAAGGTaGGTCACTTTTCTTGACTAT +
Preference number: 4 (lower is better)
Translates to: LQCSSHSESLLVSTYNATGQVTR*VTFLDY
Trigger: ATAGTCAAGAAAAGTGACCCACCTTGTTACTTGACC...GGTGGCATTGTAGGTTGACACCAGCAAAGACTCAGAGTGACTTGAGCATTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CCA 90 bp TCTGAGTCTTTGCTGGTGTCAACCTACAATGCCACCCTCAAGGAAAGCACAGTGGGTCAAGTAACAAGGTaGGTCACTTTTCTTGACTAT +
Preference number: 4 (lower is better)
Translates to: SESLLVSTYNATLKESTVGQVTR*VTFLDY
Trigger: ATAGTCAAGAAAAGTGACCCACCTTGTTACTTGACC...CACTGTGCTTTCCTTGAGGGTGGCATTGTAGGTTGACACCAGCAAAGACTCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
3UTR CAA 72 bp TTATCAATGCAAAGTCACCCGCAACAGCATCATCCATaGTGGAATCCATGGGCTCATCCTCACAACTTCCTT +
Preference number: 4 (lower is better)
Translates to: LSMQSHPQQHHP*WNPWAHPHNFL
Trigger: AAGGAAGTTGTGAGGATGAGCCCATGGATTCCACAATGGATGATGCTGTTGCGGGTGACTTTGCATTGATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423243.6
CDS-3UTR TCA 90 bp CATGCTAATCACAAAGACAAATGGAGGGAAGATACAGTGATAACACCAAGTTGGCTCTGCCTCCAAGGGTaGACTGCAAAGGAATCTTGT +
Preference number: 4 (lower is better)
Translates to: HANHKDKWREDTVITPSWLCLQG*TAKESC
Trigger: ACAAGATTCCTTTGCAGTTCACCCTTGGAGGCAGAG...CCAACTTGGTGTTATCACTGTATCTTCCCTCCATTTGTCTTTGTGATTAGCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR TCA 90 bp ATCAGAGAAAATGGCTTTGCTCACTACTCTAGCTCGGTTAGCAGAGTACGCAGCGTACAAATACACAGATaGTACACAGTTTGGGAGGAT +
Preference number: 4 (lower is better)
Translates to: IRENGFAHYSSSVSRVRSVQIHR*YTVWED
Trigger: ATCCTCCCAAACTGTGTATCATCTGTGTATTTGTAC...GCTGCGTACTCTGCTAACCGAGCTAGAGTAGTGAGCAAAGCCATTTTCTCTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR TCA 90 bp TCTGAGTCTTTGCTGGTGTCAACCTACAATGCCACCCTCAAGGAAAGCACAGTGTTTCATCTTGGGACATaGATGAATGTAGAAACCCAT +
Preference number: 4 (lower is better)
Translates to: SESLLVSTYNATLKESTVFHLGT*MNVETH
Trigger: ATGGGTTTCTACATTCATTCATGTCCCAAGATGAAA...CACTGTGCTTTCCTTGAGGGTGGCATTGTAGGTTGACACCAGCAAAGACTCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR TCA 90 bp TCTGAGTCTTTGCTGGTGTCAACCTACAATGCCACCCTCAAGGAAAGCACAGTGTCAGAAGGTCTATACTaGCCCTTATATTTCATCTTG +
Preference number: 4 (lower is better)
Translates to: SESLLVSTYNATLKESTVSEGLY*PLYFIL
Trigger: CAAGATGAAATATAAGGGTCAGTATAGACCTTCTGA...CACTGTGCTTTCCTTGAGGGTGGCATTGTAGGTTGACACCAGCAAAGACTCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR TCA 90 bp GATCAATACACTAGCTATTCTCAAACCAACATAATGCATGAATACAGCAGCCAAGAACAGGTCAGTTTCTaGACAGCAGCATCCGCTCGG +
Preference number: 4 (lower is better)
Translates to: DQYTSYSQTNIMHEYSSQEQVSF*TAASAR
Trigger: CCGAGCGGATGCTGCTGTTCAGAAACTGACCTGTTC...TTGGCTGCTGTATTCATGCATTATGTTGGTTTGAGAATAGCTAGTGTATTGATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR TCA 90 bp TCTCAGGGCACAGCAAATCAGAAGGTCTATACTGACCCTTATATTTCATCTTGGCTAATTTGTGGGTGGTaGCAGTTATTTCCCCACAGG +
Preference number: 4 (lower is better)
Translates to: SQGTANQKVYTDPYISSWLICGW*QLFPHR
Trigger: CCTGTGGGGAAATAACTGTCACCACCCACAAATTAG...CCAAGATGAAATATAAGGGTCAGTATAGACCTTCTGATTTGCTGTGCCCTGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423243.6
CDS-3UTR TCA 90 bp ATCAGAGAAAATGGCTTTGCTCACTACTCTAGCTCGGTTAGCAGAGTACGCAGCACAAACAGGAGAATTTaGGCGTATCTTGCTCTAGAA +
Preference number: 4 (lower is better)
Translates to: IRENGFAHYSSSVSRVRSTNRRI*AYLALE
Trigger: TTCTAGAGCAAGATACGCTCAAATTCTCCTGTTTGT...GCTGCGTACTCTGCTAACCGAGCTAGAGTAGTGAGCAAAGCCATTTTCTCTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR TCA 90 bp CCCACAGGTACTGAATATGTATCCTGGCACAAATCATCAGCACAACACAGGAACGCAGCAATTTCACATTaGACACTGAGTTGTAACAGC +
Preference number: 4 (lower is better)
Translates to: PTGTEYVSWHKSSAQHRNAAISH*TLSCNS
Trigger: GCTGTTACAACTCAGTGTTCAATGTGAAATTGCTGC...GTTCCTGTGTTGTGCTGATGATTTGTGCCAGGATACATATTCAGTACCTGTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR TCA 90 bp AGTAGAAGGATCTCCAATGCTCAAGTCACTCTGAGTCTTTGCTGGTGTCAACCTGAACAGAGGTCGGAATaGTTCCTTCTTCAATGTGAT +
Preference number: 4 (lower is better)
Translates to: SRRISNAQVTLSLCWCQPEQRSE*FLLQCD
Trigger: ATCACATTGAAGAAGGAATCATTCCGACCTCTGTTC...AGGTTGACACCAGCAAAGACTCAGAGTGACTTGAGCATTGGAGATCCTTCTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR TCA 90 bp ATTTTACATGCTAATCACAAAGACAAATGGAGGGAAGATACAGTGATAACACCAGGCTGGCCTCTGCTCTaGGTTACTAAGGGTGGCAGA +
Preference number: 4 (lower is better)
Translates to: ILHANHKDKWREDTVITPGWPLL*VTKGGR
Trigger: TCTGCCACCCTTAGTAACTCAGAGCAGAGGCCAGCC...TGGTGTTATCACTGTATCTTCCCTCCATTTGTCTTTGTGATTAGCATGTAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR TCA 90 bp CTGGGTCCTCAAAGGAGACAGGTACTAACCTCACCTCTAACTTGTGTGATGCATTGGCCACTTGATACTTaGCATACAAAGAAAAGGACT +
Preference number: 4 (lower is better)
Translates to: LGPQRRQVLTSPLTCVMHWPLDT*HTKKRT
Trigger: AGTCCTTTTCTTTGTATGTCAAGTATCAAGTGGCCA...ATGCATCACACAAGTTAGAGGTGAGGTTAGTACCTGTCTCCTTTGAGGACCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423243.6
CDS-3UTR TCA 90 bp CCCACAGGTACTGAATATGTATCCTGGCACAAATCATCAGCACAACACAGGAACTGCAAAGGAATCTTGTaGACTCAGTCTTCCCACATT +
Preference number: 4 (lower is better)
Translates to: PTGTEYVSWHKSSAQHRNCKGIL*TQSSHI
Trigger: AATGTGGGAAGACTGAGTTCACAAGATTCCTTTGCA...GTTCCTGTGTTGTGCTGATGATTTGTGCCAGGATACATATTCAGTACCTGTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369043.8
ENST00000423243.6
ENST00000540606.6
CDS-3UTR GCA 90 bp ATTTTACATGCTAATCACAAAGACAAATGGAGGGAAGATACAGTGATAACACCATGCCATTGGAGCGGCTaGCCGACTCGTTCTTGCAGT +
Preference number: 4 (lower is better)
Translates to: ILHANHKDKWREDTVITPCHWSG*PTRSCS
Trigger: ACTGCAAGAACGAGTCGGGCAGCCGCTCCAATGGCA...TGGTGTTATCACTGTATCTTCCCTCCATTTGTCTTTGTGATTAGCATGTAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
CDS-3UTR GCA 90 bp CATGCTAATCACAAAGACAAATGGAGGGAAGATACAGTGATAACACCAAGTTGGTACTGTCATGGAATGTaGCCACATGCCATTGGAGCG +
Preference number: 4 (lower is better)
Translates to: HANHKDKWREDTVITPSWYCHGM*PHAIGA
Trigger: CGCTCCAATGGCATGTGGGCACATTCCATGACAGTA...CCAACTTGGTGTTATCACTGTATCTTCCCTCCATTTGTCTTTGTGATTAGCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
CDS-3UTR GCA 90 bp ATCAGAGAAAATGGCTTTGCTCACTACTCTAGCTCGGTTAGCAGAGTACGCAGCCAGTTTATTTATCAATaGAAAGTCACCCGCAACAGC +
Preference number: 4 (lower is better)
Translates to: IRENGFAHYSSSVSRVRSQFIYQ*KVTRNS
Trigger: GCTGTTGCGGGTGACTTTGCATTGATAAATAAACTG...GCTGCGTACTCTGCTAACCGAGCTAGAGTAGTGAGCAAAGCCATTTTCTCTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR GCA 90 bp CTGGGTCCTCAAAGGAGACAGGTACTAACCTCACCTCTAACTTGTGTGATGCATCAGTTTATTTATCAATaGAAAGTCACCCGCAACAGC +
Preference number: 4 (lower is better)
Translates to: LGPQRRQVLTSPLTCVMHQFIYQ*KVTRNS
Trigger: GCTGTTGCGGGTGACTTTGCATTGATAAATAAACTG...ATGCATCACACAAGTTAGAGGTGAGGTTAGTACCTGTCTCCTTTGAGGACCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423243.6
CDS-3UTR GCA 90 bp AGTAGAAGGATCTCCAATGCTCAAGTCACTCTGAGTCTTTGCTGGTGTCAACCTTTTCCGGATTTCCTTTaGTTTTCGACATGGAGGCTT +
Preference number: 4 (lower is better)
Translates to: SRRISNAQVTLSLCWCQPFPDFL*FSTWRL
Trigger: AAGCCTCCATGTCGAAAAGCAAAGGAAATCCGGAAA...AGGTTGACACCAGCAAAGACTCAGAGTGACTTGAGCATTGGAGATCCTTCTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR GCA 90 bp CCCACAGGTACTGAATATGTATCCTGGCACAAATCATCAGCACAACACAGGAACCCAGCTGGGTTCTGCTaGATTAGTTTTAACCTTTTC +
Preference number: 4 (lower is better)
Translates to: PTGTEYVSWHKSSAQHRNPAGFC*ISFNLF
Trigger: GAAAAGGTTAAAACTAATGCAGCAGAACCCAGCTGG...GTTCCTGTGTTGTGCTGATGATTTGTGCCAGGATACATATTCAGTACCTGTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000423243.6
ENST00000540606.6
CDS-3UTR GCA 90 bp TGGGTACCCAAACATATGTCTCAGGGCACAGCAAATCAGAAGGTCTATACTGACCCAGCTGGGTTCTGCTaGATTAGTTTTAACCTTTTC +
Preference number: 4 (lower is better)
Translates to: WVPKHMSQGTANQKVYTDPAGFC*ISFNLF
Trigger: GAAAAGGTTAAAACTAATGCAGCAGAACCCAGCTGG...GTCAGTATAGACCTTCTGATTTGCTGTGCCCTGAGACATATGTTTGGGTACCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423243.6
CDS-3UTR GCA 90 bp TCCCCACAGGTACTGAATATGTATCCTGGCACAAATCATCAGCACAACACAGGATCTCCAGCTGGGTTCTaGTGCATTAGTTTTAACCTT +
Preference number: 4 (lower is better)
Translates to: SPQVLNMYPGTNHQHNTGSPAGF*CISFNL
Trigger: AAGGTTAAAACTAATGCAGCAGAACCCAGCTGGAGA...TCCTGTGTTGTGCTGATGATTTGTGCCAGGATACATATTCAGTACCTGTGGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000423243.6
ENST00000540606.6
CDS-3UTR GCA 90 bp TCTCAGGGCACAGCAAATCAGAAGGTCTATACTGACCCTTATATTTCATCTTGGAGTGAAGGCAGGCATTaGTCAATGGGTACCCAAACA +
Preference number: 4 (lower is better)
Translates to: SQGTANQKVYTDPYISSWSEGRH*SMGTQT
Trigger: TGTTTGGGTACCCATTGAGCAATGCCTGCCTTCACT...CCAAGATGAAATATAAGGGTCAGTATAGACCTTCTGATTTGCTGTGCCCTGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423243.6
CDS-3UTR GCA 90 bp TCTGAGTCTTTGCTGGTGTCAACCTACAATGCCACCCTCAAGGAAAGCACAGTGAATTTGAGCGTATCTTaGTCTAGAAAGAATCCTCCA +
Preference number: 4 (lower is better)
Translates to: SESLLVSTYNATLKESTVNLSVS*SRKNPP
Trigger: TGGAGGATTCTTTCTAGAGCAAGATACGCTCAAATT...CACTGTGCTTTCCTTGAGGGTGGCATTGTAGGTTGACACCAGCAAAGACTCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR GCA 90 bp CTCCAATGCTCAAGTCACTCTGAGTCTTTGCTGGTGTCAACCTACAATGCCACCAATTTGAGCGTATCTTaGTCTAGAAAGAATCCTCCA +
Preference number: 4 (lower is better)
Translates to: LQCSSHSESLLVSTYNATNLSVS*SRKNPP
Trigger: TGGAGGATTCTTTCTAGAGCAAGATACGCTCAAATT...GGTGGCATTGTAGGTTGACACCAGCAAAGACTCAGAGTGACTTGAGCATTGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR GCA 90 bp CTCCAATGCTCAAGTCACTCTGAGTCTTTGCTGGTGTCAACCTACAATGCCACCAGTAAGTCTCTCAAATaGTCTTACGAGACTACTTTG +
Preference number: 4 (lower is better)
Translates to: LQCSSHSESLLVSTYNATSKSLK*SYETTL
Trigger: CAAAGTAGTCTCGTAAGAGCATTTGAGAGACTTACT...GGTGGCATTGTAGGTTGACACCAGCAAAGACTCAGAGTGACTTGAGCATTGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR GCA 90 bp TCTGAGTCTTTGCTGGTGTCAACCTACAATGCCACCCTCAAGGAAAGCACAGTGTTGAAATTACATCTTTaGTCCCAAAACAGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: SESLLVSTYNATLKESTVLKLHL*SQNRKA
Trigger: TGCCTTCCTGTTTTGGGAGCAAAGATGTAATTTCAA...CACTGTGCTTTCCTTGAGGGTGGCATTGTAGGTTGACACCAGCAAAGACTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR GCA 90 bp CTCCAATGCTCAAGTCACTCTGAGTCTTTGCTGGTGTCAACCTACAATGCCACCTTGAAATTACATCTTTaGTCCCAAAACAGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: LQCSSHSESLLVSTYNATLKLHL*SQNRKA
Trigger: TGCCTTCCTGTTTTGGGAGCAAAGATGTAATTTCAA...GGTGGCATTGTAGGTTGACACCAGCAAAGACTCAGAGTGACTTGAGCATTGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR GCA 90 bp CAGCACCTTGGCAGGTGTGACACACACACTCTGAATGAAGAAATGCGGCTGACTCAGTCAAACTTCTTTTaGCTTATAGTCATTGGCTTT +
Preference number: 4 (lower is better)
Translates to: QHLGRCDTHTLNEEMRLTQSNFF*LIVIGF
Trigger: AAAGCCAATGACTATAAGGCAAAAGAAGTTTGACTG...AGTCAGCCGCATTTCTTCATTCAGAGTGTGTGTGTCACACCTGCCAAGGTGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224652.11
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CCA 90 bp CCCACAGGTACTGAATATGTATCCTGGCACAAATCATCAGCACAACACAGGAACCTTTGCTTTTCGACATaGAGGCTTACTCAAATCAGC +
Preference number: 4 (lower is better)
Translates to: PTGTEYVSWHKSSAQHRNLCFST*RLTQIS
Trigger: GCTGATTTGAGTAAGCCTCCATGTCGAAAAGCAAAG...GTTCCTGTGTTGTGCTGATGATTTGTGCCAGGATACATATTCAGTACCTGTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000423243.6
ENST00000540606.6
CDS-3UTR CCA 90 bp TCCCCACAGGTACTGAATATGTATCCTGGCACAAATCATCAGCACAACACAGGACTTTGCTTTTCGACATaGAGGCTTACTCAAATCAGC +
Preference number: 4 (lower is better)
Translates to: SPQVLNMYPGTNHQHNTGLCFST*RLTQIS
Trigger: GCTGATTTGAGTAAGCCTCCATGTCGAAAAGCAAAG...TCCTGTGTTGTGCTGATGATTTGTGCCAGGATACATATTCAGTACCTGTGGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000423243.6
ENST00000540606.6
CDS-3UTR CCA 90 bp CCCACAGGTACTGAATATGTATCCTGGCACAAATCATCAGCACAACACAGGAACTCGAGTGATTTTGGCTaGTTGGATTTAGCCTTTGGT +
Preference number: 4 (lower is better)
Translates to: PTGTEYVSWHKSSAQHRNSSDFG*LDLAFG
Trigger: ACCAAAGGCTAAATCCAACCAGCCAAAATCACTCGA...GTTCCTGTGTTGTGCTGATGATTTGTGCCAGGATACATATTCAGTACCTGTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000423243.6
ENST00000540606.6
CDS-3UTR CCA 90 bp CAGAGCCCAACTTCTCTCCTACGAAATCTTGTGACTGAAGTAATTCCTGAGGTTGCAGGCATTGCTCAATaGGTACCCAAACATATGTCT +
Preference number: 4 (lower is better)
Translates to: QSPTSLLRNLVTEVIPEVAGIAQ*VPKHMS
Trigger: AGACATATGTTTGGGTACCCATTGAGCAATGCCTGC...AACCTCAGGAATTACTTCAGTCACAAGATTTCGTAGGAGAGAAGTTGGGCTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423243.6
CDS-3UTR CCA 90 bp CAGCACCTTGGCAGGTGTGACACACACACTCTGAATGAAGAAATGCGGCTGACTAAAATGTCTAATTTGTaGGTGGTGACAGTTATTTCC +
Preference number: 4 (lower is better)
Translates to: QHLGRCDTHTLNEEMRLTKMSNL*VVTVIS
Trigger: GGAAATAACTGTCACCACCCACAAATTAGACATTTT...AGTCAGCCGCATTTCTTCATTCAGAGTGTGTGTGTCACACCTGCCAAGGTGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CCA 90 bp CTCCAATGCTCAAGTCACTCTGAGTCTTTGCTGGTGTCAACCTACAATGCCACCTCAAAGGACAAGAAATaGATTGTTCTAGCTCTTGTC +
Preference number: 4 (lower is better)
Translates to: LQCSSHSESLLVSTYNATSKDKK*IVLALV
Trigger: GACAAGAGCTAGAACAATCCATTTCTTGTCCTTTGA...GGTGGCATTGTAGGTTGACACCAGCAAAGACTCAGAGTGACTTGAGCATTGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CCA 90 bp TCTGAGTCTTTGCTGGTGTCAACCTACAATGCCACCCTCAAGGAAAGCACAGTGTCAAAGGACAAGAAATaGATTGTTCTAGCTCTTGTC +
Preference number: 4 (lower is better)
Translates to: SESLLVSTYNATLKESTVSKDKK*IVLALV
Trigger: GACAAGAGCTAGAACAATCCATTTCTTGTCCTTTGA...CACTGTGCTTTCCTTGAGGGTGGCATTGTAGGTTGACACCAGCAAAGACTCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CCA 90 bp CATGCTAATCACAAAGACAAATGGAGGGAAGATACAGTGATAACACCAAGTTGGTGCCACCTTGACAGGTaGGCAAAGGACTCAGCAAAA +
Preference number: 4 (lower is better)
Translates to: HANHKDKWREDTVITPSWCHLDR*AKDSAK
Trigger: TTTTGCTGAGTCCTTTGCCCACCTGTCAAGGTGGCA...CCAACTTGGTGTTATCACTGTATCTTCCCTCCATTTGTCTTTGTGATTAGCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CCA 90 bp ATCAGAGAAAATGGCTTTGCTCACTACTCTAGCTCGGTTAGCAGAGTACGCAGCTACAAAGAAAAGGACTaGCTGAAAGACGACTTGAAC +
Preference number: 4 (lower is better)
Translates to: IRENGFAHYSSSVSRVRSYKEKD*LKDDLN
Trigger: GTTCAAGTCGTCTTTCAGCCAGTCCTTTTCTTTGTA...GCTGCGTACTCTGCTAACCGAGCTAGAGTAGTGAGCAAAGCCATTTTCTCTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CCA 90 bp AAACGGCAGTACTTGGAGTTTTCAAGTGAAGGCAGGCATTGCTCAATGGGTACCTACAAAGAAAAGGACTaGCTGAAAGACGACTTGAAC +
Preference number: 4 (lower is better)
Translates to: KRQYLEFSSEGRHCSMGTYKEKD*LKDDLN
Trigger: GTTCAAGTCGTCTTTCAGCCAGTCCTTTTCTTTGTA...GGTACCCATTGAGCAATGCCTGCCTTCACTTGAAAACTCCAAGTACTGCCGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423243.6
3UTR CAA 72 bp AGACAAATGGAGGGAAGATACAGTGATAACACCAAGTaGGACATTCAAATGCTAAGCGAGCCAAGTACCAGC +
Preference number: 4 (lower is better)
Translates to: RQMEGRYSDNTK*DIQMLSEPSTS
Trigger: GCTGGTACTTGGCTCGCTTAGCATTTGAATGTCCAACTTGGTGTTATCACTGTATCTTCCCTCCATTTGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR TCA 90 bp TGCAGAGTAGACGCCCAAAGACAAAAACGAATAATCAGGATCGTAGTACAAATACTCTGCCTCCAAGGGTaGACTGCAAAGGAATCTTGT +
Preference number: 4 (lower is better)
Translates to: CRVDAQRQKRIIRIVVQILCLQG*TAKESC
Trigger: ACAAGATTCCTTTGCAGTTCACCCTTGGAGGCAGAG...TATTTGTACTACGATCCTGATTATTCGTTTTTGTCTTTGGGCGTCTACTCTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423243.6
CDS-3UTR TCA 90 bp GATCAATACACTAGCTATTCTCAAACCAACATAATGCATGAATACAGCAGCCAATCACCCCCACAGCAATaGTCTTTCCGTCAAGCCAGT +
Preference number: 4 (lower is better)
Translates to: DQYTSYSQTNIMHEYSSQSPPQQ*SFRQAS
Trigger: ACTGGCTTGACGGAAAGATCATTGCTGTGGGGGTGA...TTGGCTGCTGTATTCATGCATTATGTTGGTTTGAGAATAGCTAGTGTATTGATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR TCA 90 bp AGTAGAAGGATCTCCAATGCTCAAGTCACTCTGAGTCTTTGCTGGTGTCAACCTGTACAAATACACAGATaGTACACAGTTTGGGAGGAT +
Preference number: 4 (lower is better)
Translates to: SRRISNAQVTLSLCWCQPVQIHR*YTVWED
Trigger: ATCCTCCCAAACTGTGTATCATCTGTGTATTTGTAC...AGGTTGACACCAGCAAAGACTCAGAGTGACTTGAGCATTGGAGATCCTTCTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR TCA 90 bp TCCATGGGCTCATCCTCACAACTTCCTTTGGGAACCTCCCCTTTAGCTAGAAATTTTCATCTTGGGACATaGATGAATGTAGAAACCCAT +
Preference number: 4 (lower is better)
Translates to: SMGSSSQLPLGTSPLARNFHLGT*MNVETH
Trigger: ATGGGTTTCTACATTCATTCATGTCCCAAGATGAAA...ATTTCTAGCTAAAGGGGAGGTTCCCAAAGGAAGTTGTGAGGATGAGCCCATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423243.6
CDS-3UTR TCA 90 bp CATGCTAATCACAAAGACAAATGGAGGGAAGATACAGTGATAACACCAAGTTGGATGATGGCTCTCTTGTaGAACACCTGCAATCGGTCA +
Preference number: 4 (lower is better)
Translates to: HANHKDKWREDTVITPSWMMALL*NTCNRS
Trigger: TGACCGATTGCAGGTGTTTCACAAGAGAGCCATCAT...CCAACTTGGTGTTATCACTGTATCTTCCCTCCATTTGTCTTTGTGATTAGCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR TCA 90 bp AGTAGAAGGATCTCCAATGCTCAAGTCACTCTGAGTCTTTGCTGGTGTCAACCTACAAACAGGAGAATTTaGGCGTATCTTGCTCTAGAA +
Preference number: 4 (lower is better)
Translates to: SRRISNAQVTLSLCWCQPTNRRI*AYLALE
Trigger: TTCTAGAGCAAGATACGCTCAAATTCTCCTGTTTGT...AGGTTGACACCAGCAAAGACTCAGAGTGACTTGAGCATTGGAGATCCTTCTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR TCA 90 bp CATGCTAATCACAAAGACAAATGGAGGGAAGATACAGTGATAACACCAAGTTGGCACACACACTCTGAATaGAGAAATGCGGCTGACTTG +
Preference number: 4 (lower is better)
Translates to: HANHKDKWREDTVITPSWHTHSE*RNAADL
Trigger: CAAGTCAGCCGCATTTCTTCATTCAGAGTGTGTGTG...CCAACTTGGTGTTATCACTGTATCTTCCCTCCATTTGTCTTTGTGATTAGCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR TCA 90 bp AGTAGAAGGATCTCCAATGCTCAAGTCACTCTGAGTCTTTGCTGGTGTCAACCTTGCAAAGGAATCTTGTaGACTCTAACTTGTGTGATG +
Preference number: 4 (lower is better)
Translates to: SRRISNAQVTLSLCWCQPCKGIL*TLTCVM
Trigger: CATCACACAAGTTAGAGTTCACAAGATTCCTTTGCA...AGGTTGACACCAGCAAAGACTCAGAGTGACTTGAGCATTGGAGATCCTTCTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369040.8
CDS-3UTR TCA 90 bp CTGCTGTTTCTTATAAACACCGTAAGGCATGATGGCTCTCTTGTGAAACACCTGTGCAAAGGAATCTTGTaGACTCAGTCTTCCCACATT +
Preference number: 4 (lower is better)
Translates to: LLFLINTVRHDGSLVKHLCKGIL*TQSSHI
Trigger: AATGTGGGAAGACTGAGTTCACAAGATTCCTTTGCA...CAGGTGTTTCACAAGAGAGCCATCATGCCTTACGGTGTTTATAAGAAACAGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423243.6
CDS-3UTR GCA 90 bp TCCCCACAGGTACTGAATATGTATCCTGGCACAAATCATCAGCACAACACAGGACAGTTTATTTATCAATaGAAAGTCACCCGCAACAGC +
Preference number: 4 (lower is better)
Translates to: SPQVLNMYPGTNHQHNTGQFIYQ*KVTRNS
Trigger: GCTGTTGCGGGTGACTTTGCATTGATAAATAAACTG...TCCTGTGTTGTGCTGATGATTTGTGCCAGGATACATATTCAGTACCTGTGGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000423243.6
ENST00000540606.6
CDS-3UTR GCA 90 bp CTGCTGTTTCTTATAAACACCGTAAGGCATGATGGCTCTCTTGTGAAACACCTGTTTCCGGATTTCCTTTaGTTTTCGACATGGAGGCTT +
Preference number: 4 (lower is better)
Translates to: LLFLINTVRHDGSLVKHLFPDFL*FSTWRL
Trigger: AAGCCTCCATGTCGAAAAGCAAAGGAAATCCGGAAA...CAGGTGTTTCACAAGAGAGCCATCATGCCTTACGGTGTTTATAAGAAACAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423243.6
CDS-3UTR GCA 90 bp CCCACAGGTACTGAATATGTATCCTGGCACAAATCATCAGCACAACACAGGAACCTTACGAGACTACTTTaGAGGTCAAAATCCCAGAAA +
Preference number: 4 (lower is better)
Translates to: PTGTEYVSWHKSSAQHRNLTRLL*RSKSQK
Trigger: TTTCTGGGATTTTGACCTGCAAAGTAGTCTCGTAAG...GTTCCTGTGTTGTGCTGATGATTTGTGCCAGGATACATATTCAGTACCTGTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR GCA 90 bp TCCCCACAGGTACTGAATATGTATCCTGGCACAAATCATCAGCACAACACAGGAGTACCAGCCCTACCCTaGTTATTTTTAATAATGCAG +
Preference number: 4 (lower is better)
Translates to: SPQVLNMYPGTNHQHNTGVPALP*LFLIMQ
Trigger: CTGCATTATTAAAAATAAGCAGGGTAGGGCTGGTAC...TCCTGTGTTGTGCTGATGATTTGTGCCAGGATACATATTCAGTACCTGTGGGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR GCA 90 bp ATCAGAGAAAATGGCTTTGCTCACTACTCTAGCTCGGTTAGCAGAGTACGCAGCTTGAAATTACATCTTTaGTCCCAAAACAGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: IRENGFAHYSSSVSRVRSLKLHL*SQNRKA
Trigger: TGCCTTCCTGTTTTGGGAGCAAAGATGTAATTTCAA...GCTGCGTACTCTGCTAACCGAGCTAGAGTAGTGAGCAAAGCCATTTTCTCTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CCA 90 bp CATGCTAATCACAAAGACAAATGGAGGGAAGATACAGTGATAACACCAAGTTGGCCATTGTGGAATCCATaGGCTCATCCTCACAACTTC +
Preference number: 4 (lower is better)
Translates to: HANHKDKWREDTVITPSWPLWNP*AHPHNF
Trigger: GAAGTTGTGAGGATGAGCCCATGGATTCCACAATGG...CCAACTTGGTGTTATCACTGTATCTTCCCTCCATTTGTCTTTGTGATTAGCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CCA 90 bp TCTCAGGGCACAGCAAATCAGAAGGTCTATACTGACCCTTATATTTCATCTTGGGGATTTAGCCTTTGGTaGAAACAAAGATGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: SQGTANQKVYTDPYISSWGFSLW*KQRWWV
Trigger: CACCCACCATCTTTGTTTCCACCAAAGGCTAAATCC...CCAAGATGAAATATAAGGGTCAGTATAGACCTTCTGATTTGCTGTGCCCTGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423243.6
CDS-3UTR CCA 90 bp GGGTCCTCAAAGGAGACAGGTACTAACCTCACCTCTAACTTGTGTGATGCATTCACTGAATATGTATCCTaGCACAAATCATCAGCACAA +
Preference number: 4 (lower is better)
Translates to: GSSKETGTNLTSNLCDAFTEYVS*HKSSAQ
Trigger: TTGTGCTGATGATTTGTGCCAGGATACATATTCAGT...GAATGCATCACACAAGTTAGAGGTGAGGTTAGTACCTGTCTCCTTTGAGGACCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423243.6
CDS-3UTR CCA 90 bp TCCCCACAGGTACTGAATATGTATCCTGGCACAAATCATCAGCACAACACAGGAGATAAATCCCAATTATaGGGGCTAGGTCATAATGCA +
Preference number: 4 (lower is better)
Translates to: SPQVLNMYPGTNHQHNTGDKSQL*GLGHNA
Trigger: TGCATTATGACCTAGCCCCCATAATTGGGATTTATC...TCCTGTGTTGTGCTGATGATTTGTGCCAGGATACATATTCAGTACCTGTGGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000423243.6
ENST00000540606.6
CDS-3UTR CCA 90 bp CCCACAGGTACTGAATATGTATCCTGGCACAAATCATCAGCACAACACAGGAACACTGTCCTGAACAAATaGATACCTGATGCTAACACA +
Preference number: 4 (lower is better)
Translates to: PTGTEYVSWHKSSAQHRNTVLNK*IPDANT
Trigger: TGTGTTAGCATCAGGTATCCATTTGTTCAGGACAGT...GTTCCTGTGTTGTGCTGATGATTTGTGCCAGGATACATATTCAGTACCTGTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CCA 90 bp CTCCAATGCTCAAGTCACTCTGAGTCTTTGCTGGTGTCAACCTACAATGCCACCGACACTTTGACTACTTaGATCAATACACTAGCTATT +
Preference number: 4 (lower is better)
Translates to: LQCSSHSESLLVSTYNATDTLTT*INTLAI
Trigger: AATAGCTAGTGTATTGATCCAAGTAGTCAAAGTGTC...GGTGGCATTGTAGGTTGACACCAGCAAAGACTCAGAGTGACTTGAGCATTGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CCA 90 bp AGTAGAAGGATCTCCAATGCTCAAGTCACTCTGAGTCTTTGCTGGTGTCAACCTGGTCAAGTAACAAGGTaGGTCACTTTTCTTGACTAT +
Preference number: 4 (lower is better)
Translates to: SRRISNAQVTLSLCWCQPGQVTR*VTFLDY
Trigger: ATAGTCAAGAAAAGTGACCCACCTTGTTACTTGACC...AGGTTGACACCAGCAAAGACTCAGAGTGACTTGAGCATTGGAGATCCTTCTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CCA 90 bp CATGCTAATCACAAAGACAAATGGAGGGAAGATACAGTGATAACACCAAGTTGGTCTCAGCTAGACTGCTaGTCAAGTAACAAGGTGGGT +
Preference number: 4 (lower is better)
Translates to: HANHKDKWREDTVITPSWSQLDC*SSNKVG
Trigger: ACCCACCTTGTTACTTGACCAGCAGTCTAGCTGAGA...CCAACTTGGTGTTATCACTGTATCTTCCCTCCATTTGTCTTTGTGATTAGCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CCA 90 bp TCCCCACAGGTACTGAATATGTATCCTGGCACAAATCATCAGCACAACACAGGATACAAAGAAAAGGACTaGCTGAAAGACGACTTGAAC +
Preference number: 4 (lower is better)
Translates to: SPQVLNMYPGTNHQHNTGYKEKD*LKDDLN
Trigger: GTTCAAGTCGTCTTTCAGCCAGTCCTTTTCTTTGTA...TCCTGTGTTGTGCTGATGATTTGTGCCAGGATACATATTCAGTACCTGTGGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369043.8
ENST00000423243.6
ENST00000540606.6
3UTR CAA 72 bp ATTGTGGAATCCATGGGCTCATCCTCACAACTTCCTTaGGGAACCTCCCCTTTAGCTAGAAATTTCAACATT +
Preference number: 4 (lower is better)
Translates to: IVESMGSSSQLP*GTSPLARNFNI
Trigger: AATGTTGAAATTTCTAGCTAAAGGGGAGGTTCCCAAAGGAAGTTGTGAGGATGAGCCCATGGATTCCACAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423243.6
CDS-3UTR TCA 90 bp CTGCTGTTTCTTATAAACACCGTAAGGCATGATGGCTCTCTTGTGAAACACCTGGTACAAATACACAGATaGTACACAGTTTGGGAGGAT +
Preference number: 4 (lower is better)
Translates to: LLFLINTVRHDGSLVKHLVQIHR*YTVWED
Trigger: ATCCTCCCAAACTGTGTATCATCTGTGTATTTGTAC...CAGGTGTTTCACAAGAGAGCCATCATGCCTTACGGTGTTTATAAGAAACAGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423243.6
CDS-3UTR TCA 90 bp TCCCCACAGGTACTGAATATGTATCCTGGCACAAATCATCAGCACAACACAGGATCAGAAGGTCTATACTaGCCCTTATATTTCATCTTG +
Preference number: 4 (lower is better)
Translates to: SPQVLNMYPGTNHQHNTGSEGLY*PLYFIL
Trigger: CAAGATGAAATATAAGGGTCAGTATAGACCTTCTGA...TCCTGTGTTGTGCTGATGATTTGTGCCAGGATACATATTCAGTACCTGTGGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000423243.6
ENST00000540606.6
CDS-3UTR TCA 90 bp ATTTTACATGCTAATCACAAAGACAAATGGAGGGAAGATACAGTGATAACACCACTTCTGGGTCCTGGTTaGAACGGCAGTACTTGGAGT +
Preference number: 4 (lower is better)
Translates to: ILHANHKDKWREDTVITPLLGPG*NGSTWS
Trigger: ACTCCAAGTACTGCCGTTTCAACCAGGACCCAGAAG...TGGTGTTATCACTGTATCTTCCCTCCATTTGTCTTTGTGATTAGCATGTAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR TCA 90 bp CATGCTAATCACAAAGACAAATGGAGGGAAGATACAGTGATAACACCAAGTTGGTTTCCCCACAGGTACTaGATATGTATCCTGGCACAA +
Preference number: 4 (lower is better)
Translates to: HANHKDKWREDTVITPSWFPHRY*ICILAQ
Trigger: TTGTGCCAGGATACATATTCAGTACCTGTGGGGAAA...CCAACTTGGTGTTATCACTGTATCTTCCCTCCATTTGTCTTTGTGATTAGCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR TCA 90 bp CCCACAGGTACTGAATATGTATCCTGGCACAAATCATCAGCACAACACAGGAACTTTCACATTGAACACTaGGTTGTAACAGCACAGTTT +
Preference number: 4 (lower is better)
Translates to: PTGTEYVSWHKSSAQHRNFHIEH*VVTAQF
Trigger: AAACTGTGCTGTTACAACTCAGTGTTCAATGTGAAA...GTTCCTGTGTTGTGCTGATGATTTGTGCCAGGATACATATTCAGTACCTGTGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR TCA 90 bp CCCACAGGTACTGAATATGTATCCTGGCACAAATCATCAGCACAACACAGGAACAGTTTTCTCTTCATCTaGTATTCAAGGGTTGTGATC +
Preference number: 4 (lower is better)
Translates to: PTGTEYVSWHKSSAQHRNSFLFI*YSRVVI
Trigger: GATCACAACCCTTGAATATCAGATGAAGAGAAAACT...GTTCCTGTGTTGTGCTGATGATTTGTGCCAGGATACATATTCAGTACCTGTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR GCA 90 bp AGTAGAAGGATCTCCAATGCTCAAGTCACTCTGAGTCTTTGCTGGTGTCAACCTAGTAAGTCTCTCAAATaGTCTTACGAGACTACTTTG +
Preference number: 4 (lower is better)
Translates to: SRRISNAQVTLSLCWCQPSKSLK*SYETTL
Trigger: CAAAGTAGTCTCGTAAGAGCATTTGAGAGACTTACT...AGGTTGACACCAGCAAAGACTCAGAGTGACTTGAGCATTGGAGATCCTTCTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR GCA 90 bp CATGCTAATCACAAAGACAAATGGAGGGAAGATACAGTGATAACACCAAGTTGGGTCACTCTGAGTCTTTaGTGGTGTCAACCTACAATG +
Preference number: 4 (lower is better)
Translates to: HANHKDKWREDTVITPSWVTLSL*WCQPTM
Trigger: CATTGTAGGTTGACACCAGCAAAGACTCAGAGTGAC...CCAACTTGGTGTTATCACTGTATCTTCCCTCCATTTGTCTTTGTGATTAGCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR GCA 90 bp CCCACAGGTACTGAATATGTATCCTGGCACAAATCATCAGCACAACACAGGAACTTGAAATTACATCTTTaGTCCCAAAACAGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: PTGTEYVSWHKSSAQHRNLKLHL*SQNRKA
Trigger: TGCCTTCCTGTTTTGGGAGCAAAGATGTAATTTCAA...GTTCCTGTGTTGTGCTGATGATTTGTGCCAGGATACATATTCAGTACCTGTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CCA 90 bp GATCAATACACTAGCTATTCTCAAACCAACATAATGCATGAATACAGCAGCCAAATCAGCCCCTTTGCCTaGCTTAGGAACTGTGTGAAC +
Preference number: 4 (lower is better)
Translates to: DQYTSYSQTNIMHEYSSQISPFA*LRNCVN
Trigger: GTTCACACAGTTCCTAAGCCAGGCAAAGGGGCTGAT...TTGGCTGCTGTATTCATGCATTATGTTGGTTTGAGAATAGCTAGTGTATTGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CCA 90 bp CATGCTAATCACAAAGACAAATGGAGGGAAGATACAGTGATAACACCAAGTTGGGGATTTAGCCTTTGGTaGAAACAAAGATGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: HANHKDKWREDTVITPSWGFSLW*KQRWWV
Trigger: CACCCACCATCTTTGTTTCCACCAAAGGCTAAATCC...CCAACTTGGTGTTATCACTGTATCTTCCCTCCATTTGTCTTTGTGATTAGCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CCA 90 bp CATGCTAATCACAAAGACAAATGGAGGGAAGATACAGTGATAACACCAAGTTGGGCAGGCATTGCTCAATaGGTACCCAAACATATGTCT +
Preference number: 4 (lower is better)
Translates to: HANHKDKWREDTVITPSWAGIAQ*VPKHMS
Trigger: AGACATATGTTTGGGTACCCATTGAGCAATGCCTGC...CCAACTTGGTGTTATCACTGTATCTTCCCTCCATTTGTCTTTGTGATTAGCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CCA 90 bp GATCAATACACTAGCTATTCTCAAACCAACATAATGCATGAATACAGCAGCCAAACTGCTTCTGGGTCCTaGTTGAAACGGCAGTACTTG +
Preference number: 4 (lower is better)
Translates to: DQYTSYSQTNIMHEYSSQTASGS*LKRQYL
Trigger: CAAGTACTGCCGTTTCAACCAGGACCCAGAAGCAGT...TTGGCTGCTGTATTCATGCATTATGTTGGTTTGAGAATAGCTAGTGTATTGATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CCA 90 bp ATCAGAGAAAATGGCTTTGCTCACTACTCTAGCTCGGTTAGCAGAGTACGCAGCAATCACAAAGACAAATaGAGGGAAGATACAGTGATA +
Preference number: 4 (lower is better)
Translates to: IRENGFAHYSSSVSRVRSNHKDK*REDTVI
Trigger: TATCACTGTATCTTCCCTCCATTTGTCTTTGTGATT...GCTGCGTACTCTGCTAACCGAGCTAGAGTAGTGAGCAAAGCCATTTTCTCTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CCA 90 bp CATGCTAATCACAAAGACAAATGGAGGGAAGATACAGTGATAACACCAAGTTGGTCAAGGAAAGCACAGTaGTTCACAGACAGGGATGAT +
Preference number: 4 (lower is better)
Translates to: HANHKDKWREDTVITPSWSRKAQ*FTDRDD
Trigger: ATCATCCCTGTCTGTGAACCACTGTGCTTTCCTTGA...CCAACTTGGTGTTATCACTGTATCTTCCCTCCATTTGTCTTTGTGATTAGCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR TCA 90 bp CATGCTAATCACAAAGACAAATGGAGGGAAGATACAGTGATAACACCAAGTTGGGAACAGAGGTCGGAATaGTTCCTTCTTCAATGTGAT +
Preference number: 4 (lower is better)
Translates to: HANHKDKWREDTVITPSWEQRSE*FLLQCD
Trigger: ATCACATTGAAGAAGGAATCATTCCGACCTCTGTTC...CCAACTTGGTGTTATCACTGTATCTTCCCTCCATTTGTCTTTGTGATTAGCATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR TCA 90 bp CATGCTAATCACAAAGACAAATGGAGGGAAGATACAGTGATAACACCAAGTTGGAGGCTCTATAGATTCTaGAGGCAGTTCCAAGTAAGT +
Preference number: 4 (lower is better)
Translates to: HANHKDKWREDTVITPSWRLYRF*RQFQVS
Trigger: ACTTACTTGGAACTGCCTTCAGAATCTATAGAGCCT...CCAACTTGGTGTTATCACTGTATCTTCCCTCCATTTGTCTTTGTGATTAGCATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR GCA 90 bp GATCAATACACTAGCTATTCTCAAACCAACATAATGCATGAATACAGCAGCCAAAGTGAAGGCAGGCATTaGTCAATGGGTACCCAAACA +
Preference number: 4 (lower is better)
Translates to: DQYTSYSQTNIMHEYSSQSEGRH*SMGTQT
Trigger: TGTTTGGGTACCCATTGAGCAATGCCTGCCTTCACT...TTGGCTGCTGTATTCATGCATTATGTTGGTTTGAGAATAGCTAGTGTATTGATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CCA 90 bp GATCAATACACTAGCTATTCTCAAACCAACATAATGCATGAATACAGCAGCCAACCATTGTGGAATCCATaGGCTCATCCTCACAACTTC +
Preference number: 4 (lower is better)
Translates to: DQYTSYSQTNIMHEYSSQPLWNP*AHPHNF
Trigger: GAAGTTGTGAGGATGAGCCCATGGATTCCACAATGG...TTGGCTGCTGTATTCATGCATTATGTTGGTTTGAGAATAGCTAGTGTATTGATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CCA 90 bp ATTTTACATGCTAATCACAAAGACAAATGGAGGGAAGATACAGTGATAACACCAATCAGCCCCTTTGCCTaGCTTAGGAACTGTGTGAAC +
Preference number: 4 (lower is better)
Translates to: ILHANHKDKWREDTVITPISPFA*LRNCVN
Trigger: GTTCACACAGTTCCTAAGCCAGGCAAAGGGGCTGAT...TGGTGTTATCACTGTATCTTCCCTCCATTTGTCTTTGTGATTAGCATGTAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CCA 90 bp CATGCTAATCACAAAGACAAATGGAGGGAAGATACAGTGATAACACCAAGTTGGCTTTGCTTTTCGACATaGAGGCTTACTCAAATCAGC +
Preference number: 4 (lower is better)
Translates to: HANHKDKWREDTVITPSWLCFST*RLTQIS
Trigger: GCTGATTTGAGTAAGCCTCCATGTCGAAAAGCAAAG...CCAACTTGGTGTTATCACTGTATCTTCCCTCCATTTGTCTTTGTGATTAGCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CCA 90 bp GATCAATACACTAGCTATTCTCAAACCAACATAATGCATGAATACAGCAGCCAATGGAAACAAAGATGGTaGGTGACCTTGAGCCTGGAA +
Preference number: 4 (lower is better)
Translates to: DQYTSYSQTNIMHEYSSQWKQRW*VTLSLE
Trigger: TTCCAGGCTCAAGGTCACCCACCATCTTTGTTTCCA...TTGGCTGCTGTATTCATGCATTATGTTGGTTTGAGAATAGCTAGTGTATTGATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CCA 90 bp CATGCTAATCACAAAGACAAATGGAGGGAAGATACAGTGATAACACCAAGTTGGTCGAGTGATTTTGGCTaGTTGGATTTAGCCTTTGGT +
Preference number: 4 (lower is better)
Translates to: HANHKDKWREDTVITPSWSSDFG*LDLAFG
Trigger: ACCAAAGGCTAAATCCAACCAGCCAAAATCACTCGA...CCAACTTGGTGTTATCACTGTATCTTCCCTCCATTTGTCTTTGTGATTAGCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CCA 90 bp CCCACAGGTACTGAATATGTATCCTGGCACAAATCATCAGCACAACACAGGAACGACACTTTGACTACTTaGATCAATACACTAGCTATT +
Preference number: 4 (lower is better)
Translates to: PTGTEYVSWHKSSAQHRNDTLTT*INTLAI
Trigger: AATAGCTAGTGTATTGATCCAAGTAGTCAAAGTGTC...GTTCCTGTGTTGTGCTGATGATTTGTGCCAGGATACATATTCAGTACCTGTGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CCA 90 bp CATGCTAATCACAAAGACAAATGGAGGGAAGATACAGTGATAACACCAAGTTGGCAGTATTCACTCAGCTaGGGCTCAAAAGGACAAATA +
Preference number: 4 (lower is better)
Translates to: HANHKDKWREDTVITPSWQYSLS*GSKGQI
Trigger: TATTTGTCCTTTTGAGCCCCAGCTGAGTGAATACTG...CCAACTTGGTGTTATCACTGTATCTTCCCTCCATTTGTCTTTGTGATTAGCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR TCA 90 bp ATTTTACATGCTAATCACAAAGACAAATGGAGGGAAGATACAGTGATAACACCAGCCATCCTCGGTCTATaGGATCCTGATAATCCTGTA +
Preference number: 4 (lower is better)
Translates to: ILHANHKDKWREDTVITPAILGL*DPDNPV
Trigger: TACAGGATTATCAGGATCTCATAGACCGAGGATGGC...TGGTGTTATCACTGTATCTTCCCTCCATTTGTCTTTGTGATTAGCATGTAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR TCA 90 bp ATTTTACATGCTAATCACAAAGACAAATGGAGGGAAGATACAGTGATAACACCAATGATGGCTCTCTTGTaGAACACCTGCAATCGGTCA +
Preference number: 4 (lower is better)
Translates to: ILHANHKDKWREDTVITPMMALL*NTCNRS
Trigger: TGACCGATTGCAGGTGTTTCACAAGAGAGCCATCAT...TGGTGTTATCACTGTATCTTCCCTCCATTTGTCTTTGTGATTAGCATGTAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR TCA 90 bp CATGCTAATCACAAAGACAAATGGAGGGAAGATACAGTGATAACACCAAGTTGGTGGCCACTTGATACTTaGCATACAAAGAAAAGGACT +
Preference number: 4 (lower is better)
Translates to: HANHKDKWREDTVITPSWWPLDT*HTKKRT
Trigger: AGTCCTTTTCTTTGTATGTCAAGTATCAAGTGGCCA...CCAACTTGGTGTTATCACTGTATCTTCCCTCCATTTGTCTTTGTGATTAGCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369043.8
ENST00000540606.6
CDS-3UTR GCA 90 bp TGCAGAGTAGACGCCCAAAGACAAAAACGAATAATCAGGATCGTAGTACAAATATCTCCAGCTGGGTTCTaGTGCATTAGTTTTAACCTT +
Preference number: 4 (lower is better)
Translates to: CRVDAQRQKRIIRIVVQISPAGF*CISFNL
Trigger: AAGGTTAAAACTAATGCAGCAGAACCCAGCTGGAGA...TATTTGTACTACGATCCTGATTATTCGTTTTTGTCTTTGGGCGTCTACTCTGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423243.6
CDS-3UTR GCA 90 bp CATGCTAATCACAAAGACAAATGGAGGGAAGATACAGTGATAACACCAAGTTGGGTACCAGCCCTACCCTaGTTATTTTTAATAATGCAG +
Preference number: 4 (lower is better)
Translates to: HANHKDKWREDTVITPSWVPALP*LFLIMQ
Trigger: CTGCATTATTAAAAATAAGCAGGGTAGGGCTGGTAC...CCAACTTGGTGTTATCACTGTATCTTCCCTCCATTTGTCTTTGTGATTAGCATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CCA 90 bp ATTTTACATGCTAATCACAAAGACAAATGGAGGGAAGATACAGTGATAACACCACAGCATCATCCATTGTaGAATCCATGGGCTCATCCT +
Preference number: 4 (lower is better)
Translates to: ILHANHKDKWREDTVITPQHHPL*NPWAHP
Trigger: AGGATGAGCCCATGGATTCCACAATGGATGATGCTG...TGGTGTTATCACTGTATCTTCCCTCCATTTGTCTTTGTGATTAGCATGTAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CCA 90 bp ATTTTACATGCTAATCACAAAGACAAATGGAGGGAAGATACAGTGATAACACCATGGAAACAAAGATGGTaGGTGACCTTGAGCCTGGAA +
Preference number: 4 (lower is better)
Translates to: ILHANHKDKWREDTVITPWKQRW*VTLSLE
Trigger: TTCCAGGCTCAAGGTCACCCACCATCTTTGTTTCCA...TGGTGTTATCACTGTATCTTCCCTCCATTTGTCTTTGTGATTAGCATGTAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CCA 90 bp GATCAATACACTAGCTATTCTCAAACCAACATAATGCATGAATACAGCAGCCAAGGATTTAGCCTTTGGTaGAAACAAAGATGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: DQYTSYSQTNIMHEYSSQGFSLW*KQRWWV
Trigger: CACCCACCATCTTTGTTTCCACCAAAGGCTAAATCC...TTGGCTGCTGTATTCATGCATTATGTTGGTTTGAGAATAGCTAGTGTATTGATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CCA 90 bp CAGAGCCCAACTTCTCTCCTACGAAATCTTGTGACTGAAGTAATTCCTGAGGTTAAAATGTCTAATTTGTaGGTGGTGACAGTTATTTCC +
Preference number: 4 (lower is better)
Translates to: QSPTSLLRNLVTEVIPEVKMSNL*VVTVIS
Trigger: GGAAATAACTGTCACCACCCACAAATTAGACATTTT...AACCTCAGGAATTACTTCAGTCACAAGATTTCGTAGGAGAGAAGTTGGGCTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423243.6
CDS-3UTR CCA 90 bp GATCAATACACTAGCTATTCTCAAACCAACATAATGCATGAATACAGCAGCCAATCAAGGAAAGCACAGTaGTTCACAGACAGGGATGAT +
Preference number: 4 (lower is better)
Translates to: DQYTSYSQTNIMHEYSSQSRKAQ*FTDRDD
Trigger: ATCATCCCTGTCTGTGAACCACTGTGCTTTCCTTGA...TTGGCTGCTGTATTCATGCATTATGTTGGTTTGAGAATAGCTAGTGTATTGATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CCA 90 bp GATCAATACACTAGCTATTCTCAAACCAACATAATGCATGAATACAGCAGCCAAACTCTGAGTCTTTGCTaGTGTCAACCTACAATGCCA +
Preference number: 4 (lower is better)
Translates to: DQYTSYSQTNIMHEYSSQTLSLC*CQPTMP
Trigger: TGGCATTGTAGGTTGACACCAGCAAAGACTCAGAGT...TTGGCTGCTGTATTCATGCATTATGTTGGTTTGAGAATAGCTAGTGTATTGATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR TCA 90 bp ATTTTACATGCTAATCACAAAGACAAATGGAGGGAAGATACAGTGATAACACCACTTGGAGTTTTCAAGTaGAGGCAGGCATTGCTCAAT +
Preference number: 4 (lower is better)
Translates to: ILHANHKDKWREDTVITPLGVFK*RQALLN
Trigger: ATTGAGCAATGCCTGCCTTCACTTGAAAACTCCAAG...TGGTGTTATCACTGTATCTTCCCTCCATTTGTCTTTGTGATTAGCATGTAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR TCA 90 bp CATGCTAATCACAAAGACAAATGGAGGGAAGATACAGTGATAACACCAAGTTGGTTTCACATTGAACACTaGGTTGTAACAGCACAGTTT +
Preference number: 4 (lower is better)
Translates to: HANHKDKWREDTVITPSWFHIEH*VVTAQF
Trigger: AAACTGTGCTGTTACAACTCAGTGTTCAATGTGAAA...CCAACTTGGTGTTATCACTGTATCTTCCCTCCATTTGTCTTTGTGATTAGCATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR TCA 90 bp GATCAATACACTAGCTATTCTCAAACCAACATAATGCATGAATACAGCAGCCAAGCAGCAATTTCACATTaGACACTGAGTTGTAACAGC +
Preference number: 4 (lower is better)
Translates to: DQYTSYSQTNIMHEYSSQAAISH*TLSCNS
Trigger: GCTGTTACAACTCAGTGTTCAATGTGAAATTGCTGC...TTGGCTGCTGTATTCATGCATTATGTTGGTTTGAGAATAGCTAGTGTATTGATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR TCA 90 bp CATGCTAATCACAAAGACAAATGGAGGGAAGATACAGTGATAACACCAAGTTGGAGTTTTCTCTTCATCTaGTATTCAAGGGTTGTGATC +
Preference number: 4 (lower is better)
Translates to: HANHKDKWREDTVITPSWSFLFI*YSRVVI
Trigger: GATCACAACCCTTGAATATCAGATGAAGAGAAAACT...CCAACTTGGTGTTATCACTGTATCTTCCCTCCATTTGTCTTTGTGATTAGCATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR TCA 90 bp CATGCTAATCACAAAGACAAATGGAGGGAAGATACAGTGATAACACCAAGTTGGCCTTTTAAGACACTTTaGCTACTTGGATCAATACAC +
Preference number: 4 (lower is better)
Translates to: HANHKDKWREDTVITPSWPFKTL*LLGSIH
Trigger: GTGTATTGATCCAAGTAGTCAAAGTGTCTTAAAAGG...CCAACTTGGTGTTATCACTGTATCTTCCCTCCATTTGTCTTTGTGATTAGCATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR TCA 90 bp GATCAATACACTAGCTATTCTCAAACCAACATAATGCATGAATACAGCAGCCAAGTGGGTCACTTTTCTTaGCTATGCTTTTCTAGTCCA +
Preference number: 4 (lower is better)
Translates to: DQYTSYSQTNIMHEYSSQVGHFS*LCFSSP
Trigger: TGGACTAGAAAAGCATAGTCAAGAAAAGTGACCCAC...TTGGCTGCTGTATTCATGCATTATGTTGGTTTGAGAATAGCTAGTGTATTGATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR TCA 90 bp ATTTTACATGCTAATCACAAAGACAAATGGAGGGAAGATACAGTGATAACACCAGGTAGCAAGGGGAATTaGAATTACATCTTTGCTCCC +
Preference number: 4 (lower is better)
Translates to: ILHANHKDKWREDTVITPGSKGN*NYIFAP
Trigger: GGGAGCAAAGATGTAATTTCAATTCCCCTTGCTACC...TGGTGTTATCACTGTATCTTCCCTCCATTTGTCTTTGTGATTAGCATGTAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR TCA 90 bp TGCAGAGTAGACGCCCAAAGACAAAAACGAATAATCAGGATCGTAGTACAAATATGGTGTATGGCCACTTaGTACTTGACATACAAAGAA +
Preference number: 4 (lower is better)
Translates to: CRVDAQRQKRIIRIVVQIWCMAT*YLTYKE
Trigger: TTCTTTGTATGTCAAGTATCAAGTGGCCATACACCA...TATTTGTACTACGATCCTGATTATTCGTTTTTGTCTTTGGGCGTCTACTCTGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423243.6
CDS-3UTR CCA 90 bp ATTTTACATGCTAATCACAAAGACAAATGGAGGGAAGATACAGTGATAACACCAAATCCTGTACTGTCATaGAATGTGCCCACATGCCAT +
Preference number: 4 (lower is better)
Translates to: ILHANHKDKWREDTVITPNPVLS*NVPTCH
Trigger: ATGGCATGTGGGCACATTCCATGACAGTACAGGATT...TGGTGTTATCACTGTATCTTCCCTCCATTTGTCTTTGTGATTAGCATGTAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
CDS-3UTR CCA 90 bp ATTTTACATGCTAATCACAAAGACAAATGGAGGGAAGATACAGTGATAACACCAGGATTTAGCCTTTGGTaGAAACAAAGATGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: ILHANHKDKWREDTVITPGFSLW*KQRWWV
Trigger: CACCCACCATCTTTGTTTCCACCAAAGGCTAAATCC...TGGTGTTATCACTGTATCTTCCCTCCATTTGTCTTTGTGATTAGCATGTAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CCA 90 bp ATTTTACATGCTAATCACAAAGACAAATGGAGGGAAGATACAGTGATAACACCAAGGAATCTTGTGAACTaGCTTTCGGTTGGCGTATCA +
Preference number: 4 (lower is better)
Translates to: ILHANHKDKWREDTVITPRNLVN*LSVGVS
Trigger: TGATACGCCAACCGAAAGCCAGTTCACAAGATTCCT...TGGTGTTATCACTGTATCTTCCCTCCATTTGTCTTTGTGATTAGCATGTAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224652.11
CDS-3UTR CCA 90 bp ATTTTACATGCTAATCACAAAGACAAATGGAGGGAAGATACAGTGATAACACCAGCAGGCATTGCTCAATaGGTACCCAAACATATGTCT +
Preference number: 4 (lower is better)
Translates to: ILHANHKDKWREDTVITPAGIAQ*VPKHMS
Trigger: AGACATATGTTTGGGTACCCATTGAGCAATGCCTGC...TGGTGTTATCACTGTATCTTCCCTCCATTTGTCTTTGTGATTAGCATGTAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CCA 90 bp CATGCTAATCACAAAGACAAATGGAGGGAAGATACAGTGATAACACCAAGTTGGACTGAATATGTATCCTaGCACAAATCATCAGCACAA +
Preference number: 4 (lower is better)
Translates to: HANHKDKWREDTVITPSWTEYVS*HKSSAQ
Trigger: TTGTGCTGATGATTTGTGCCAGGATACATATTCAGT...CCAACTTGGTGTTATCACTGTATCTTCCCTCCATTTGTCTTTGTGATTAGCATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR TCA 90 bp ATTTTACATGCTAATCACAAAGACAAATGGAGGGAAGATACAGTGATAACACCAAGGCTCTATAGATTCTaGAGGCAGTTCCAAGTAAGT +
Preference number: 4 (lower is better)
Translates to: ILHANHKDKWREDTVITPRLYRF*RQFQVS
Trigger: ACTTACTTGGAACTGCCTTCAGAATCTATAGAGCCT...TGGTGTTATCACTGTATCTTCCCTCCATTTGTCTTTGTGATTAGCATGTAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR TCA 90 bp ATTTTACATGCTAATCACAAAGACAAATGGAGGGAAGATACAGTGATAACACCAGTGGGTCACTTTTCTTaGCTATGCTTTTCTAGTCCA +
Preference number: 4 (lower is better)
Translates to: ILHANHKDKWREDTVITPVGHFS*LCFSSP
Trigger: TGGACTAGAAAAGCATAGTCAAGAAAAGTGACCCAC...TGGTGTTATCACTGTATCTTCCCTCCATTTGTCTTTGTGATTAGCATGTAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR GCA 90 bp TGCAGAGTAGACGCCCAAAGACAAAAACGAATAATCAGGATCGTAGTACAAATAAATTTGAGCGTATCTTaGTCTAGAAAGAATCCTCCA +
Preference number: 4 (lower is better)
Translates to: CRVDAQRQKRIIRIVVQINLSVS*SRKNPP
Trigger: TGGAGGATTCTTTCTAGAGCAAGATACGCTCAAATT...TATTTGTACTACGATCCTGATTATTCGTTTTTGTCTTTGGGCGTCTACTCTGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423243.6
CDS-3UTR CCA 90 bp ATTTTACATGCTAATCACAAAGACAAATGGAGGGAAGATACAGTGATAACACCATCGAGTGATTTTGGCTaGTTGGATTTAGCCTTTGGT +
Preference number: 4 (lower is better)
Translates to: ILHANHKDKWREDTVITPSSDFG*LDLAFG
Trigger: ACCAAAGGCTAAATCCAACCAGCCAAAATCACTCGA...TGGTGTTATCACTGTATCTTCCCTCCATTTGTCTTTGTGATTAGCATGTAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CCA 90 bp CATGCTAATCACAAAGACAAATGGAGGGAAGATACAGTGATAACACCAAGTTGGAAAATGTCTAATTTGTaGGTGGTGACAGTTATTTCC +
Preference number: 4 (lower is better)
Translates to: HANHKDKWREDTVITPSWKMSNL*VVTVIS
Trigger: GGAAATAACTGTCACCACCCACAAATTAGACATTTT...CCAACTTGGTGTTATCACTGTATCTTCCCTCCATTTGTCTTTGTGATTAGCATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CCA 90 bp CATGCTAATCACAAAGACAAATGGAGGGAAGATACAGTGATAACACCAAGTTGGAATCACAAAGACAAATaGAGGGAAGATACAGTGATA +
Preference number: 4 (lower is better)
Translates to: HANHKDKWREDTVITPSWNHKDK*REDTVI
Trigger: TATCACTGTATCTTCCCTCCATTTGTCTTTGTGATT...CCAACTTGGTGTTATCACTGTATCTTCCCTCCATTTGTCTTTGTGATTAGCATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CCA 90 bp ATTTTACATGCTAATCACAAAGACAAATGGAGGGAAGATACAGTGATAACACCACAGTATTCACTCAGCTaGGGCTCAAAAGGACAAATA +
Preference number: 4 (lower is better)
Translates to: ILHANHKDKWREDTVITPQYSLS*GSKGQI
Trigger: TATTTGTCCTTTTGAGCCCCAGCTGAGTGAATACTG...TGGTGTTATCACTGTATCTTCCCTCCATTTGTCTTTGTGATTAGCATGTAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR TCA 90 bp GATCAATACACTAGCTATTCTCAAACCAACATAATGCATGAATACAGCAGCCAATTTCATCTTGGGACATaGATGAATGTAGAAACCCAT +
Preference number: 4 (lower is better)
Translates to: DQYTSYSQTNIMHEYSSQFHLGT*MNVETH
Trigger: ATGGGTTTCTACATTCATTCATGTCCCAAGATGAAA...TTGGCTGCTGTATTCATGCATTATGTTGGTTTGAGAATAGCTAGTGTATTGATC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR GCA 90 bp ATTTTACATGCTAATCACAAAGACAAATGGAGGGAAGATACAGTGATAACACCACAGTTTATTTATCAATaGAAAGTCACCCGCAACAGC +
Preference number: 4 (lower is better)
Translates to: ILHANHKDKWREDTVITPQFIYQ*KVTRNS
Trigger: GCTGTTGCGGGTGACTTTGCATTGATAAATAAACTG...TGGTGTTATCACTGTATCTTCCCTCCATTTGTCTTTGTGATTAGCATGTAAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR GCA 90 bp GATCAATACACTAGCTATTCTCAAACCAACATAATGCATGAATACAGCAGCCAAAATTTGAGCGTATCTTaGTCTAGAAAGAATCCTCCA +
Preference number: 4 (lower is better)
Translates to: DQYTSYSQTNIMHEYSSQNLSVS*SRKNPP
Trigger: TGGAGGATTCTTTCTAGAGCAAGATACGCTCAAATT...TTGGCTGCTGTATTCATGCATTATGTTGGTTTGAGAATAGCTAGTGTATTGATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR TCA 90 bp ATTTTACATGCTAATCACAAAGACAAATGGAGGGAAGATACAGTGATAACACCATCAGAAGGTCTATACTaGCCCTTATATTTCATCTTG +
Preference number: 4 (lower is better)
Translates to: ILHANHKDKWREDTVITPSEGLY*PLYFIL
Trigger: CAAGATGAAATATAAGGGTCAGTATAGACCTTCTGA...TGGTGTTATCACTGTATCTTCCCTCCATTTGTCTTTGTGATTAGCATGTAAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR TCA 90 bp ATTTTACATGCTAATCACAAAGACAAATGGAGGGAAGATACAGTGATAACACCACCTTTTAAGACACTTTaGCTACTTGGATCAATACAC +
Preference number: 4 (lower is better)
Translates to: ILHANHKDKWREDTVITPPFKTL*LLGSIH
Trigger: GTGTATTGATCCAAGTAGTCAAAGTGTCTTAAAAGG...TGGTGTTATCACTGTATCTTCCCTCCATTTGTCTTTGTGATTAGCATGTAAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR GCA 90 bp GATCAATACACTAGCTATTCTCAAACCAACATAATGCATGAATACAGCAGCCAACAGTCAAACTTCTTTTaGCTTATAGTCATTGGCTTT +
Preference number: 4 (lower is better)
Translates to: DQYTSYSQTNIMHEYSSQQSNFF*LIVIGF
Trigger: AAAGCCAATGACTATAAGGCAAAAGAAGTTTGACTG...TTGGCTGCTGTATTCATGCATTATGTTGGTTTGAGAATAGCTAGTGTATTGATC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224652.11
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CCA 90 bp GATCAATACACTAGCTATTCTCAAACCAACATAATGCATGAATACAGCAGCCAAAAAATGTCTAATTTGTaGGTGGTGACAGTTATTTCC +
Preference number: 4 (lower is better)
Translates to: DQYTSYSQTNIMHEYSSQKMSNL*VVTVIS
Trigger: GGAAATAACTGTCACCACCCACAAATTAGACATTTT...TTGGCTGCTGTATTCATGCATTATGTTGGTTTGAGAATAGCTAGTGTATTGATC
36% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CCA 90 bp GATCAATACACTAGCTATTCTCAAACCAACATAATGCATGAATACAGCAGCCAAAATCACAAAGACAAATaGAGGGAAGATACAGTGATA +
Preference number: 4 (lower is better)
Translates to: DQYTSYSQTNIMHEYSSQNHKDK*REDTVI
Trigger: TATCACTGTATCTTCCCTCCATTTGTCTTTGTGATT...TTGGCTGCTGTATTCATGCATTATGTTGGTTTGAGAATAGCTAGTGTATTGATC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CCA 90 bp GATCAATACACTAGCTATTCTCAAACCAACATAATGCATGAATACAGCAGCCAAGACACTTTGACTACTTaGATCAATACACTAGCTATT +
Preference number: 4 (lower is better)
Translates to: DQYTSYSQTNIMHEYSSQDTLTT*INTLAI
Trigger: AATAGCTAGTGTATTGATCCAAGTAGTCAAAGTGTC...TTGGCTGCTGTATTCATGCATTATGTTGGTTTGAGAATAGCTAGTGTATTGATC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS TCA 90 bp CTTTGCCCTCCTTGGAATCGCAGTAGCCGCAGTGGTAGCCGGCCCTaGGGCCCTTGTATTCCACCACCGACGCCATGGCCGCCGCGAGGG +
Preference number: 5 (lower is better)
Translates to: LCPPWNRSSRSGSRP*GPCIPPPTPWPPRG
Trigger: CCCTCGCGGCGGCCATGGCGTCGGTGGTGGAATACAAGGGCCTCAGGGCCGGCTACCACTGCGGCTACTGCGATTCCAAGGAGGGCAAAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540606.6
CDS-3UTR CAA 90 bp TCTGAGTCTTTGCTGGTGTCAACCTACAATGCCACCCTCAAGGAAAGCACAGTGTGTGCCCACATGCCATaGGAGCGGCTGCCCGACTCG +
Preference number: 5 (lower is better)
Translates to: SESLLVSTYNATLKESTVCAHMP*ERLPDS
Trigger: CGAGTCGGGCAGCCGCTCCAATGGCATGTGGGCACA...CACTGTGCTTTCCTTGAGGGTGGCATTGTAGGTTGACACCAGCAAAGACTCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
CDS-3UTR CAA 90 bp TCCCCACAGGTACTGAATATGTATCCTGGCACAAATCATCAGCACAACACAGGACCGGCCCTGAGGCCCTaGTATTCCACCACCGACGCC +
Preference number: 5 (lower is better)
Translates to: SPQVLNMYPGTNHQHNTGPALRP*YSTTDA
Trigger: GGCGTCGGTGGTGGAATACAAGGGCCTCAGGGCCGG...TCCTGTGTTGTGCTGATGATTTGTGCCAGGATACATATTCAGTACCTGTGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540606.6
CDS-3UTR CAA 90 bp CCGGCAGAGGTGAACAGGTCAGTTTCTGAACAGCAGCATCCGCTCGGAGCACTTTCCTCACAACTTCCTTaGGGAACCTCCCCTTTAGCT +
Preference number: 5 (lower is better)
Translates to: PAEVNRSVSEQQHPLGALSSQLP*GTSPLA
Trigger: AGCTAAAGGGGAGGTTCCCAAAGGAAGTTGTGAGGA...AAGTGCTCCGAGCGGATGCTGCTGTTCAGAAACTGACCTGTTCACCTCTGCCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423243.6
CDS-3UTR CAA 90 bp CAGCACCTTGGCAGGTGTGACACACACACTCTGAATGAAGAAATGCGGCTGACTACAGTGCCTGCCACCTaGACAGGTGGGCAAAGGACT +
Preference number: 5 (lower is better)
Translates to: QHLGRCDTHTLNEEMRLTTVPAT*TGGQRT
Trigger: AGTCCTTTGCCCACCTGTCAAGGTGGCAGGCACTGT...AGTCAGCCGCATTTCTTCATTCAGAGTGTGTGTGTCACACCTGCCAAGGTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CAA 90 bp CACCTGCAATCGGTCAGGTTCCGTACTGCGATCCTCATCCACTGCTTCTGGGTCTGGCTGAAAGACGACTaGAACTCTGGGTCCTCAAAG +
Preference number: 5 (lower is better)
Translates to: HLQSVRFRTAILIHCFWVWLKDD*NSGSSK
Trigger: CTTTGAGGACCCAGAGTTCAAGTCGTCTTTCAGCCA...GACCCAGAAGCAGTGGATGAGGATCGCAGTACGGAACCTGACCGATTGCAGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423243.6
CDS-3UTR CAA 90 bp GCTTTGCTCACTACTCTAGCTCGGTTAGCAGAGTACGCAGCACCTTGGCAGGTGTCCTCACAACTTCCTTaGGGAACCTCCCCTTTAGCT +
Preference number: 5 (lower is better)
Translates to: ALLTTLARLAEYAAPWQVSSQLP*GTSPLA
Trigger: AGCTAAAGGGGAGGTTCCCAAAGGAAGTTGTGAGGA...CACCTGCCAAGGTGCTGCGTACTCTGCTAACCGAGCTAGAGTAGTGAGCAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CAA 90 bp CAGCACCTTGGCAGGTGTGACACACACACTCTGAATGAAGAAATGCGGCTGACTAGATGGTGGGTGACCTaGAGCCTGGAAACCCTCAAG +
Preference number: 5 (lower is better)
Translates to: QHLGRCDTHTLNEEMRLTRWWVT*SLETLK
Trigger: CTTGAGGGTTTCCAGGCTCAAGGTCACCCACCATCT...AGTCAGCCGCATTTCTTCATTCAGAGTGTGTGTGTCACACCTGCCAAGGTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CAA 90 bp CAGCACCTTGGCAGGTGTGACACACACACTCTGAATGAAGAAATGCGGCTGACTAGAGTACGCAGCACCTaGGCAGGTGTGACACACACA +
Preference number: 5 (lower is better)
Translates to: QHLGRCDTHTLNEEMRLTRVRST*AGVTHT
Trigger: TGTGTGTGTCACACCTGCCAAGGTGCTGCGTACTCT...AGTCAGCCGCATTTCTTCATTCAGAGTGTGTGTGTCACACCTGCCAAGGTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CAA 90 bp TCTGAGTCTTTGCTGGTGTCAACCTACAATGCCACCCTCAAGGAAAGCACAGTGAGATGGTGGGTGACCTaGAGCCTGGAAACCCTCAAG +
Preference number: 5 (lower is better)
Translates to: SESLLVSTYNATLKESTVRWWVT*SLETLK
Trigger: CTTGAGGGTTTCCAGGCTCAAGGTCACCCACCATCT...CACTGTGCTTTCCTTGAGGGTGGCATTGTAGGTTGACACCAGCAAAGACTCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CAA 90 bp GCTTTGCTCACTACTCTAGCTCGGTTAGCAGAGTACGCAGCACCTTGGCAGGTGCAGATGATACACAGTTaGGGAGGATGTCAATCACCC +
Preference number: 5 (lower is better)
Translates to: ALLTTLARLAEYAAPWQVQMIHS*GGCQSP
Trigger: GGGTGATTGACATCCTCCCAAACTGTGTATCATCTG...CACCTGCCAAGGTGCTGCGTACTCTGCTAACCGAGCTAGAGTAGTGAGCAAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CAA 90 bp CTCCAATGCTCAAGTCACTCTGAGTCTTTGCTGGTGTCAACCTACAATGCCACCGCTTCTGGGTCCTGGTaGAAACGGCAGTACTTGGAG +
Preference number: 5 (lower is better)
Translates to: LQCSSHSESLLVSTYNATASGSW*KRQYLE
Trigger: CTCCAAGTACTGCCGTTTCAACCAGGACCCAGAAGC...GGTGGCATTGTAGGTTGACACCAGCAAAGACTCAGAGTGACTTGAGCATTGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CAA 90 bp ATCAGAGAAAATGGCTTTGCTCACTACTCTAGCTCGGTTAGCAGAGTACGCAGCACAGTGCCTGCCACCTaGACAGGTGGGCAAAGGACT +
Preference number: 5 (lower is better)
Translates to: IRENGFAHYSSSVSRVRSTVPAT*TGGQRT
Trigger: AGTCCTTTGCCCACCTGTCAAGGTGGCAGGCACTGT...GCTGCGTACTCTGCTAACCGAGCTAGAGTAGTGAGCAAAGCCATTTTCTCTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CAA 90 bp CTCCAATGCTCAAGTCACTCTGAGTCTTTGCTGGTGTCAACCTACAATGCCACCAGAGTACGCAGCACCTaGGCAGGTGTGACACACACA +
Preference number: 5 (lower is better)
Translates to: LQCSSHSESLLVSTYNATRVRST*AGVTHT
Trigger: TGTGTGTGTCACACCTGCCAAGGTGCTGCGTACTCT...GGTGGCATTGTAGGTTGACACCAGCAAAGACTCAGAGTGACTTGAGCATTGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CAA 90 bp CCCACAGGTACTGAATATGTATCCTGGCACAAATCATCAGCACAACACAGGAACATGCCGCAGGACGCTTaGCCCTCCTTGGAATCGCAG +
Preference number: 5 (lower is better)
Translates to: PTGTEYVSWHKSSAQHRNMPQDA*PSLESQ
Trigger: CTGCGATTCCAAGGAGGGCAAAGCGTCCTGCGGCAT...GTTCCTGTGTTGTGCTGATGATTTGTGCCAGGATACATATTCAGTACCTGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540606.6
CDS TCA 90 bp TTGATTGGATTGAAGGATGCAAAGTACCGATCCTCGGTGTGTCTGTaGGGGTGCTGCTTCTGGGTCCTGGTTGAAACGGCAGTACTTGGA +
Preference number: 5 (lower is better)
Translates to: LIGLKDAKYRSSVCL*GCCFWVLVETAVLG
Trigger: TCCAAGTACTGCCGTTTCAACCAGGACCCAGAAGCAGCACCCTCACAGACACACCGAGGATCGGTACTTTGCATCCTTCAATCCAATCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485281.1
CDS-3UTR CAA 90 bp CTGGGTCCTCAAAGGAGACAGGTACTAACCTCACCTCTAACTTGTGTGATGCATGCTTCTGGGTCCTGGTaGAAACGGCAGTACTTGGAG +
Preference number: 5 (lower is better)
Translates to: LGPQRRQVLTSPLTCVMHASGSW*KRQYLE
Trigger: CTCCAAGTACTGCCGTTTCAACCAGGACCCAGAAGC...ATGCATCACACAAGTTAGAGGTGAGGTTAGTACCTGTCTCCTTTGAGGACCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423243.6
CDS-3UTR CAA 90 bp TCCCCACAGGTACTGAATATGTATCCTGGCACAAATCATCAGCACAACACAGGAACAGTGCCTGCCACCTaGACAGGTGGGCAAAGGACT +
Preference number: 5 (lower is better)
Translates to: SPQVLNMYPGTNHQHNTGTVPAT*TGGQRT
Trigger: AGTCCTTTGCCCACCTGTCAAGGTGGCAGGCACTGT...TCCTGTGTTGTGCTGATGATTTGTGCCAGGATACATATTCAGTACCTGTGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CAA 90 bp CAGCACCTTGGCAGGTGTGACACACACACTCTGAATGAAGAAATGCGGCTGACTCAACAGCATCATCCATaGTGGAATCCATGGGCTCAT +
Preference number: 5 (lower is better)
Translates to: QHLGRCDTHTLNEEMRLTQQHHP*WNPWAH
Trigger: ATGAGCCCATGGATTCCACAATGGATGATGCTGTTG...AGTCAGCCGCATTTCTTCATTCAGAGTGTGTGTGTCACACCTGCCAAGGTGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CAA 90 bp CCCACAGGTACTGAATATGTATCCTGGCACAAATCATCAGCACAACACAGGAACAGATGGTGGGTGACCTaGAGCCTGGAAACCCTCAAG +
Preference number: 5 (lower is better)
Translates to: PTGTEYVSWHKSSAQHRNRWWVT*SLETLK
Trigger: CTTGAGGGTTTCCAGGCTCAAGGTCACCCACCATCT...GTTCCTGTGTTGTGCTGATGATTTGTGCCAGGATACATATTCAGTACCTGTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000423243.6
ENST00000540606.6
CDS-3UTR CAA 90 bp CAGCACCTTGGCAGGTGTGACACACACACTCTGAATGAAGAAATGCGGCTGACTCAGATGATACACAGTTaGGGAGGATGTCAATCACCC +
Preference number: 5 (lower is better)
Translates to: QHLGRCDTHTLNEEMRLTQMIHS*GGCQSP
Trigger: GGGTGATTGACATCCTCCCAAACTGTGTATCATCTG...AGTCAGCCGCATTTCTTCATTCAGAGTGTGTGTGTCACACCTGCCAAGGTGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CAA 90 bp AGTAGAAGGATCTCCAATGCTCAAGTCACTCTGAGTCTTTGCTGGTGTCAACCTGCTTCTGGGTCCTGGTaGAAACGGCAGTACTTGGAG +
Preference number: 5 (lower is better)
Translates to: SRRISNAQVTLSLCWCQPASGSW*KRQYLE
Trigger: CTCCAAGTACTGCCGTTTCAACCAGGACCCAGAAGC...AGGTTGACACCAGCAAAGACTCAGAGTGACTTGAGCATTGGAGATCCTTCTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CAA 90 bp CCCACAGGTACTGAATATGTATCCTGGCACAAATCATCAGCACAACACAGGAACGCTTCTGGGTCCTGGTaGAAACGGCAGTACTTGGAG +
Preference number: 5 (lower is better)
Translates to: PTGTEYVSWHKSSAQHRNASGSW*KRQYLE
Trigger: CTCCAAGTACTGCCGTTTCAACCAGGACCCAGAAGC...GTTCCTGTGTTGTGCTGATGATTTGTGCCAGGATACATATTCAGTACCTGTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000423243.6
ENST00000540606.6
CDS-3UTR CAA 90 bp CCGGCAGAGGTGAACAGGTCAGTTTCTGAACAGCAGCATCCGCTCGGAGCACTTTACAAACAGGAGAATTaGAGCGTATCTTGCTCTAGA +
Preference number: 5 (lower is better)
Translates to: PAEVNRSVSEQQHPLGALYKQEN*SVSCSR
Trigger: TCTAGAGCAAGATACGCTCAAATTCTCCTGTTTGTA...AAGTGCTCCGAGCGGATGCTGCTGTTCAGAAACTGACCTGTTCACCTCTGCCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423243.6
CDS-3UTR CAA 90 bp CCCACAGGTACTGAATATGTATCCTGGCACAAATCATCAGCACAACACAGGAACAGAGTACGCAGCACCTaGGCAGGTGTGACACACACA +
Preference number: 5 (lower is better)
Translates to: PTGTEYVSWHKSSAQHRNRVRST*AGVTHT
Trigger: TGTGTGTGTCACACCTGCCAAGGTGCTGCGTACTCT...GTTCCTGTGTTGTGCTGATGATTTGTGCCAGGATACATATTCAGTACCTGTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CAA 90 bp CAGCACCTTGGCAGGTGTGACACACACACTCTGAATGAAGAAATGCGGCTGACTTCAGAGAAAATGGCTTaGCTCACTACTCTAGCTCGG +
Preference number: 5 (lower is better)
Translates to: QHLGRCDTHTLNEEMRLTSEKMA*LTTLAR
Trigger: CCGAGCTAGAGTAGTGAGCAAAGCCATTTTCTCTGA...AGTCAGCCGCATTTCTTCATTCAGAGTGTGTGTGTCACACCTGCCAAGGTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CAA 90 bp GATCAATACACTAGCTATTCTCAAACCAACATAATGCATGAATACAGCAGCCAATGTGCCCACATGCCATaGGAGCGGCTGCCCGACTCG +
Preference number: 5 (lower is better)
Translates to: DQYTSYSQTNIMHEYSSQCAHMP*ERLPDS
Trigger: CGAGTCGGGCAGCCGCTCCAATGGCATGTGGGCACA...TTGGCTGCTGTATTCATGCATTATGTTGGTTTGAGAATAGCTAGTGTATTGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
CDS-3UTR CAA 90 bp CTCCAATGCTCAAGTCACTCTGAGTCTTTGCTGGTGTCAACCTACAATGCCACCCAACAGCATCATCCATaGTGGAATCCATGGGCTCAT +
Preference number: 5 (lower is better)
Translates to: LQCSSHSESLLVSTYNATQQHHP*WNPWAH
Trigger: ATGAGCCCATGGATTCCACAATGGATGATGCTGTTG...GGTGGCATTGTAGGTTGACACCAGCAAAGACTCAGAGTGACTTGAGCATTGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CAA 90 bp GCTTTGCTCACTACTCTAGCTCGGTTAGCAGAGTACGCAGCACCTTGGCAGGTGCTCTCTAAACTCTCTTaGATGTCATCACTGAGTGTT +
Preference number: 5 (lower is better)
Translates to: ALLTTLARLAEYAAPWQVLSKLS*MSSLSV
Trigger: AACACTCAGTGATGACATCAAAGAGAGTTTAGAGAG...CACCTGCCAAGGTGCTGCGTACTCTGCTAACCGAGCTAGAGTAGTGAGCAAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CAA 90 bp CAGAGCCCAACTTCTCTCCTACGAAATCTTGTGACTGAAGTAATTCCTGAGGTTAGATGGTGGGTGACCTaGAGCCTGGAAACCCTCAAG +
Preference number: 5 (lower is better)
Translates to: QSPTSLLRNLVTEVIPEVRWWVT*SLETLK
Trigger: CTTGAGGGTTTCCAGGCTCAAGGTCACCCACCATCT...AACCTCAGGAATTACTTCAGTCACAAGATTTCGTAGGAGAGAAGTTGGGCTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423243.6
CDS-3UTR CAA 90 bp TCTGAGTCTTTGCTGGTGTCAACCTACAATGCCACCCTCAAGGAAAGCACAGTGCAGATGATACACAGTTaGGGAGGATGTCAATCACCC +
Preference number: 5 (lower is better)
Translates to: SESLLVSTYNATLKESTVQMIHS*GGCQSP
Trigger: GGGTGATTGACATCCTCCCAAACTGTGTATCATCTG...CACTGTGCTTTCCTTGAGGGTGGCATTGTAGGTTGACACCAGCAAAGACTCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CAA 90 bp GCTTTGCTCACTACTCTAGCTCGGTTAGCAGAGTACGCAGCACCTTGGCAGGTGTACAAACAGGAGAATTaGAGCGTATCTTGCTCTAGA +
Preference number: 5 (lower is better)
Translates to: ALLTTLARLAEYAAPWQVYKQEN*SVSCSR
Trigger: TCTAGAGCAAGATACGCTCAAATTCTCCTGTTTGTA...CACCTGCCAAGGTGCTGCGTACTCTGCTAACCGAGCTAGAGTAGTGAGCAAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CAA 90 bp GCTTTGCTCACTACTCTAGCTCGGTTAGCAGAGTACGCAGCACCTTGGCAGGTGAGTTGTGGTAAGATGTaGGAGTCAAGTTTTCTCTTC +
Preference number: 5 (lower is better)
Translates to: ALLTTLARLAEYAAPWQVSCGKM*ESSFLF
Trigger: GAAGAGAAAACTTGACTCCAACATCTTACCACAACT...CACCTGCCAAGGTGCTGCGTACTCTGCTAACCGAGCTAGAGTAGTGAGCAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CAA 90 bp GCTTTGCTCACTACTCTAGCTCGGTTAGCAGAGTACGCAGCACCTTGGCAGGTGATTGAAATTACATCTTaGCTCCCAAAACAGGAAGGC +
Preference number: 5 (lower is better)
Translates to: ALLTTLARLAEYAAPWQVIEITS*LPKQEG
Trigger: GCCTTCCTGTTTTGGGAGCAAAGATGTAATTTCAAT...CACCTGCCAAGGTGCTGCGTACTCTGCTAACCGAGCTAGAGTAGTGAGCAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS TCA 90 bp TCTGGTAACGTTTATAGACCTGGTAAGACTCCAGAAGTGTGGCTTTaGACTGCGAACTTGGTGGAGATGATCTCACCACCCTCACCTCTA +
Preference number: 5 (lower is better)
Translates to: SGNVYRPGKTPEVWL*TANLVEMISPPSPL
Trigger: TAGAGGTGAGGGTGGTGAGATCATCTCCACCAAGTTCGCAGTTCAAAGCCACACTTCTGGAGTCTTACCAGGTCTATAAACGTTACCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224652.11
CDS-3UTR CAA 90 bp ATTTTACATGCTAATCACAAAGACAAATGGAGGGAAGATACAGTGATAACACCATGTGCCCACATGCCATaGGAGCGGCTGCCCGACTCG +
Preference number: 5 (lower is better)
Translates to: ILHANHKDKWREDTVITPCAHMP*ERLPDS
Trigger: CGAGTCGGGCAGCCGCTCCAATGGCATGTGGGCACA...TGGTGTTATCACTGTATCTTCCCTCCATTTGTCTTTGTGATTAGCATGTAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
CDS-3UTR CAA 90 bp CCCACAGGTACTGAATATGTATCCTGGCACAAATCATCAGCACAACACAGGAACTCCTCACAACTTCCTTaGGGAACCTCCCCTTTAGCT +
Preference number: 5 (lower is better)
Translates to: PTGTEYVSWHKSSAQHRNSSQLP*GTSPLA
Trigger: AGCTAAAGGGGAGGTTCCCAAAGGAAGTTGTGAGGA...GTTCCTGTGTTGTGCTGATGATTTGTGCCAGGATACATATTCAGTACCTGTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000423243.6
ENST00000540606.6
CDS-3UTR CAA 90 bp TCCCCACAGGTACTGAATATGTATCCTGGCACAAATCATCAGCACAACACAGGATCCAGAAGTGTGGCTTaGAACTGCGAACTTGGTGGA +
Preference number: 5 (lower is better)
Translates to: SPQVLNMYPGTNHQHNTGSRSVA*NCELGG
Trigger: TCCACCAAGTTCGCAGTTCAAAGCCACACTTCTGGA...TCCTGTGTTGTGCTGATGATTTGTGCCAGGATACATATTCAGTACCTGTGGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224652.11
CDS-3UTR CAA 90 bp TCCATGGGCTCATCCTCACAACTTCCTTTGGGAACCTCCCCTTTAGCTAGAAATCAGATGATACACAGTTaGGGAGGATGTCAATCACCC +
Preference number: 5 (lower is better)
Translates to: SMGSSSQLPLGTSPLARNQMIHS*GGCQSP
Trigger: GGGTGATTGACATCCTCCCAAACTGTGTATCATCTG...ATTTCTAGCTAAAGGGGAGGTTCCCAAAGGAAGTTGTGAGGATGAGCCCATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423243.6
CDS-3UTR CAA 90 bp TCTGAGTCTTTGCTGGTGTCAACCTACAATGCCACCCTCAAGGAAAGCACAGTGAGAAATGCGGCTGACTaGGATGTTGAGTTTCTAGAG +
Preference number: 5 (lower is better)
Translates to: SESLLVSTYNATLKESTVRNAAD*DVEFLE
Trigger: CTCTAGAAACTCAACATCCAAGTCAGCCGCATTTCT...CACTGTGCTTTCCTTGAGGGTGGCATTGTAGGTTGACACCAGCAAAGACTCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CAA 90 bp TCTGAGTCTTTGCTGGTGTCAACCTACAATGCCACCCTCAAGGAAAGCACAGTGAGTCACTCTGAGTCTTaGCTGGTGTCAACCTACAAT +
Preference number: 5 (lower is better)
Translates to: SESLLVSTYNATLKESTVSHSES*LVSTYN
Trigger: ATTGTAGGTTGACACCAGCAAAGACTCAGAGTGACT...CACTGTGCTTTCCTTGAGGGTGGCATTGTAGGTTGACACCAGCAAAGACTCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CAA 90 bp TCTGAGTCTTTGCTGGTGTCAACCTACAATGCCACCCTCAAGGAAAGCACAGTGAACCTCACCTCTAACTaGTGTGATGCATTCTCTGGT +
Preference number: 5 (lower is better)
Translates to: SESLLVSTYNATLKESTVNLTSN*CDAFSG
Trigger: ACCAGAGAATGCATCACACAAGTTAGAGGTGAGGTT...CACTGTGCTTTCCTTGAGGGTGGCATTGTAGGTTGACACCAGCAAAGACTCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CAA 90 bp CCCACAGGTACTGAATATGTATCCTGGCACAAATCATCAGCACAACACAGGAACTGGCTGAAAGACGACTaGAACTCTGGGTCCTCAAAG +
Preference number: 5 (lower is better)
Translates to: PTGTEYVSWHKSSAQHRNWLKDD*NSGSSK
Trigger: CTTTGAGGACCCAGAGTTCAAGTCGTCTTTCAGCCA...GTTCCTGTGTTGTGCTGATGATTTGTGCCAGGATACATATTCAGTACCTGTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369043.8
ENST00000423243.6
ENST00000540606.6
CDS-3UTR CAA 90 bp CAGCACCTTGGCAGGTGTGACACACACACTCTGAATGAAGAAATGCGGCTGACTCTGGTGTATGGCCACTaGATACTTGACATACAAAGA +
Preference number: 5 (lower is better)
Translates to: QHLGRCDTHTLNEEMRLTLVYGH*ILDIQR
Trigger: TCTTTGTATGTCAAGTATCAAGTGGCCATACACCAG...AGTCAGCCGCATTTCTTCATTCAGAGTGTGTGTGTCACACCTGCCAAGGTGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CAA 90 bp TCCCCACAGGTACTGAATATGTATCCTGGCACAAATCATCAGCACAACACAGGAAAGGTCGGCACCTTATaGTGTACTGAGGACAACATG +
Preference number: 5 (lower is better)
Translates to: SPQVLNMYPGTNHQHNTGKVGTL*CTEDNM
Trigger: CATGTTGTCCTCAGTACACAATAAGGTGCCGACCTT...TCCTGTGTTGTGCTGATGATTTGTGCCAGGATACATATTCAGTACCTGTGGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CAA 90 bp TCCCCACAGGTACTGAATATGTATCCTGGCACAAATCATCAGCACAACACAGGACAACAGCATCATCCATaGTGGAATCCATGGGCTCAT +
Preference number: 5 (lower is better)
Translates to: SPQVLNMYPGTNHQHNTGQQHHP*WNPWAH
Trigger: ATGAGCCCATGGATTCCACAATGGATGATGCTGTTG...TCCTGTGTTGTGCTGATGATTTGTGCCAGGATACATATTCAGTACCTGTGGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000423243.6
ENST00000540606.6
CDS-3UTR CAA 90 bp CCCACAGGTACTGAATATGTATCCTGGCACAAATCATCAGCACAACACAGGAACCAACAGCATCATCCATaGTGGAATCCATGGGCTCAT +
Preference number: 5 (lower is better)
Translates to: PTGTEYVSWHKSSAQHRNQQHHP*WNPWAH
Trigger: ATGAGCCCATGGATTCCACAATGGATGATGCTGTTG...GTTCCTGTGTTGTGCTGATGATTTGTGCCAGGATACATATTCAGTACCTGTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000423243.6
ENST00000540606.6
CDS-3UTR CAA 90 bp AGTAGAAGGATCTCCAATGCTCAAGTCACTCTGAGTCTTTGCTGGTGTCAACCTCAACAGCATCATCCATaGTGGAATCCATGGGCTCAT +
Preference number: 5 (lower is better)
Translates to: SRRISNAQVTLSLCWCQPQQHHP*WNPWAH
Trigger: ATGAGCCCATGGATTCCACAATGGATGATGCTGTTG...AGGTTGACACCAGCAAAGACTCAGAGTGACTTGAGCATTGGAGATCCTTCTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CAA 90 bp CAGCACCTTGGCAGGTGTGACACACACACTCTGAATGAAGAAATGCGGCTGACTCTCTCTAAACTCTCTTaGATGTCATCACTGAGTGTT +
Preference number: 5 (lower is better)
Translates to: QHLGRCDTHTLNEEMRLTLSKLS*MSSLSV
Trigger: AACACTCAGTGATGACATCAAAGAGAGTTTAGAGAG...AGTCAGCCGCATTTCTTCATTCAGAGTGTGTGTGTCACACCTGCCAAGGTGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CAA 90 bp AGTAGAAGGATCTCCAATGCTCAAGTCACTCTGAGTCTTTGCTGGTGTCAACCTACCCTCACCTCTAACTaGTGTGATGCATTCTCTGGT +
Preference number: 5 (lower is better)
Translates to: SRRISNAQVTLSLCWCQPTLTSN*CDAFSG
Trigger: ACCAGAGAATGCATCACACAAGTTAGAGGTGAGGGT...AGGTTGACACCAGCAAAGACTCAGAGTGACTTGAGCATTGGAGATCCTTCTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224652.11
CDS-3UTR CAA 90 bp AGTAGAAGGATCTCCAATGCTCAAGTCACTCTGAGTCTTTGCTGGTGTCAACCTCAGATGATACACAGTTaGGGAGGATGTCAATCACCC +
Preference number: 5 (lower is better)
Translates to: SRRISNAQVTLSLCWCQPQMIHS*GGCQSP
Trigger: GGGTGATTGACATCCTCCCAAACTGTGTATCATCTG...AGGTTGACACCAGCAAAGACTCAGAGTGACTTGAGCATTGGAGATCCTTCTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CAA 90 bp CTCCAATGCTCAAGTCACTCTGAGTCTTTGCTGGTGTCAACCTACAATGCCACCTCTTACGAGACTACTTaGCAGGTCAAAATCCCAGAA +
Preference number: 5 (lower is better)
Translates to: LQCSSHSESLLVSTYNATSYETT*QVKIPE
Trigger: TTCTGGGATTTTGACCTGCAAAGTAGTCTCGTAAGA...GGTGGCATTGTAGGTTGACACCAGCAAAGACTCAGAGTGACTTGAGCATTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CAA 90 bp CTGGGTCCTCAAAGGAGACAGGTACTAACCTCACCTCTAACTTGTGTGATGCATAACCTCACCTCTAACTaGTGTGATGCATTCTCTGGT +
Preference number: 5 (lower is better)
Translates to: LGPQRRQVLTSPLTCVMHNLTSN*CDAFSG
Trigger: ACCAGAGAATGCATCACACAAGTTAGAGGTGAGGTT...ATGCATCACACAAGTTAGAGGTGAGGTTAGTACCTGTCTCCTTTGAGGACCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423243.6
CDS-3UTR CAA 90 bp TCTGAGTCTTTGCTGGTGTCAACCTACAATGCCACCCTCAAGGAAAGCACAGTGCTGAGGACAACATGTTaGATTCATGACAGGTTTGTA +
Preference number: 5 (lower is better)
Translates to: SESLLVSTYNATLKESTVLRTTC*IHDRFV
Trigger: TACAAACCTGTCATGAATCAAACATGTTGTCCTCAG...CACTGTGCTTTCCTTGAGGGTGGCATTGTAGGTTGACACCAGCAAAGACTCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CAA 90 bp CCCACAGGTACTGAATATGTATCCTGGCACAAATCATCAGCACAACACAGGAACTTGAAACGGCAGTACTaGGAGTTTTCAAGTGAAGGC +
Preference number: 5 (lower is better)
Translates to: PTGTEYVSWHKSSAQHRNLKRQY*EFSSEG
Trigger: GCCTTCACTTGAAAACTCCAAGTACTGCCGTTTCAA...GTTCCTGTGTTGTGCTGATGATTTGTGCCAGGATACATATTCAGTACCTGTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000423243.6
ENST00000540606.6
CDS-3UTR CAA 90 bp AGTAGAAGGATCTCCAATGCTCAAGTCACTCTGAGTCTTTGCTGGTGTCAACCTTTGAAACGGCAGTACTaGGAGTTTTCAAGTGAAGGC +
Preference number: 5 (lower is better)
Translates to: SRRISNAQVTLSLCWCQPLKRQY*EFSSEG
Trigger: GCCTTCACTTGAAAACTCCAAGTACTGCCGTTTCAA...AGGTTGACACCAGCAAAGACTCAGAGTGACTTGAGCATTGGAGATCCTTCTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CAA 90 bp TGGGTACCCAAACATATGTCTCAGGGCACAGCAAATCAGAAGGTCTATACTGACTTGAAACGGCAGTACTaGGAGTTTTCAAGTGAAGGC +
Preference number: 5 (lower is better)
Translates to: WVPKHMSQGTANQKVYTDLKRQY*EFSSEG
Trigger: GCCTTCACTTGAAAACTCCAAGTACTGCCGTTTCAA...GTCAGTATAGACCTTCTGATTTGCTGTGCCCTGAGACATATGTTTGGGTACCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423243.6
CDS-3UTR CAA 90 bp CCCACAGGTACTGAATATGTATCCTGGCACAAATCATCAGCACAACACAGGAACAGAAATGCGGCTGACTaGGATGTTGAGTTTCTAGAG +
Preference number: 5 (lower is better)
Translates to: PTGTEYVSWHKSSAQHRNRNAAD*DVEFLE
Trigger: CTCTAGAAACTCAACATCCAAGTCAGCCGCATTTCT...GTTCCTGTGTTGTGCTGATGATTTGTGCCAGGATACATATTCAGTACCTGTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CAA 90 bp TCCCCACAGGTACTGAATATGTATCCTGGCACAAATCATCAGCACAACACAGGAAGTCACTCTGAGTCTTaGCTGGTGTCAACCTACAAT +
Preference number: 5 (lower is better)
Translates to: SPQVLNMYPGTNHQHNTGSHSES*LVSTYN
Trigger: ATTGTAGGTTGACACCAGCAAAGACTCAGAGTGACT...TCCTGTGTTGTGCTGATGATTTGTGCCAGGATACATATTCAGTACCTGTGGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CAA 90 bp AGTAGAAGGATCTCCAATGCTCAAGTCACTCTGAGTCTTTGCTGGTGTCAACCTAGTCACTCTGAGTCTTaGCTGGTGTCAACCTACAAT +
Preference number: 5 (lower is better)
Translates to: SRRISNAQVTLSLCWCQPSHSES*LVSTYN
Trigger: ATTGTAGGTTGACACCAGCAAAGACTCAGAGTGACT...AGGTTGACACCAGCAAAGACTCAGAGTGACTTGAGCATTGGAGATCCTTCTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CAA 90 bp CAGCACCTTGGCAGGTGTGACACACACACTCTGAATGAAGAAATGCGGCTGACTAGACACTTTGACTACTaGGATCAATACACTAGCTAT +
Preference number: 5 (lower is better)
Translates to: QHLGRCDTHTLNEEMRLTRHFDY*DQYTSY
Trigger: ATAGCTAGTGTATTGATCCAAGTAGTCAAAGTGTCT...AGTCAGCCGCATTTCTTCATTCAGAGTGTGTGTGTCACACCTGCCAAGGTGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CAA 90 bp TCTGAGTCTTTGCTGGTGTCAACCTACAATGCCACCCTCAAGGAAAGCACAGTGATTGAAATTACATCTTaGCTCCCAAAACAGGAAGGC +
Preference number: 5 (lower is better)
Translates to: SESLLVSTYNATLKESTVIEITS*LPKQEG
Trigger: GCCTTCCTGTTTTGGGAGCAAAGATGTAATTTCAAT...CACTGTGCTTTCCTTGAGGGTGGCATTGTAGGTTGACACCAGCAAAGACTCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CAA 90 bp AGTAGAAGGATCTCCAATGCTCAAGTCACTCTGAGTCTTTGCTGGTGTCAACCTAACCTCACCTCTAACTaGTGTGATGCATTCTCTGGT +
Preference number: 5 (lower is better)
Translates to: SRRISNAQVTLSLCWCQPNLTSN*CDAFSG
Trigger: ACCAGAGAATGCATCACACAAGTTAGAGGTGAGGTT...AGGTTGACACCAGCAAAGACTCAGAGTGACTTGAGCATTGGAGATCCTTCTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CAA 90 bp ATCAGAGAAAATGGCTTTGCTCACTACTCTAGCTCGGTTAGCAGAGTACGCAGCCTGGTGTATGGCCACTaGATACTTGACATACAAAGA +
Preference number: 5 (lower is better)
Translates to: IRENGFAHYSSSVSRVRSLVYGH*ILDIQR
Trigger: TCTTTGTATGTCAAGTATCAAGTGGCCATACACCAG...GCTGCGTACTCTGCTAACCGAGCTAGAGTAGTGAGCAAAGCCATTTTCTCTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CAA 90 bp TCCATGGGCTCATCCTCACAACTTCCTTTGGGAACCTCCCCTTTAGCTAGAAATCTGGTGTATGGCCACTaGATACTTGACATACAAAGA +
Preference number: 5 (lower is better)
Translates to: SMGSSSQLPLGTSPLARNLVYGH*ILDIQR
Trigger: TCTTTGTATGTCAAGTATCAAGTGGCCATACACCAG...ATTTCTAGCTAAAGGGGAGGTTCCCAAAGGAAGTTGTGAGGATGAGCCCATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423243.6
CDS CCA 90 bp ACTGCAAAGGAATCTTGTGAACTGGCTTTCGGTTGGCGTATCAGGTaGGTTCTTGTGAATAACCATCTGGTAACGTTTATAGACCTGGTA +
Preference number: 5 (lower is better)
Translates to: TAKESCELAFGWRIR*VLVNNHLVTFIDLV
Trigger: TACCAGGTCTATAAACGTTACCAGATGGTTATTCACAAGAACCCACCTGATACGCCAACCGAAAGCCAGTTCACAAGATTCCTTTGCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224652.11
CDS-3UTR CAA 90 bp CATGCTAATCACAAAGACAAATGGAGGGAAGATACAGTGATAACACCAAGTTGGTCCTCACAACTTCCTTaGGGAACCTCCCCTTTAGCT +
Preference number: 5 (lower is better)
Translates to: HANHKDKWREDTVITPSWSSQLP*GTSPLA
Trigger: AGCTAAAGGGGAGGTTCCCAAAGGAAGTTGTGAGGA...CCAACTTGGTGTTATCACTGTATCTTCCCTCCATTTGTCTTTGTGATTAGCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CAA 90 bp ATCAGAGAAAATGGCTTTGCTCACTACTCTAGCTCGGTTAGCAGAGTACGCAGCTACAAACAGGAGAATTaGAGCGTATCTTGCTCTAGA +
Preference number: 5 (lower is better)
Translates to: IRENGFAHYSSSVSRVRSYKQEN*SVSCSR
Trigger: TCTAGAGCAAGATACGCTCAAATTCTCCTGTTTGTA...GCTGCGTACTCTGCTAACCGAGCTAGAGTAGTGAGCAAAGCCATTTTCTCTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CAA 90 bp ATCAGAGAAAATGGCTTTGCTCACTACTCTAGCTCGGTTAGCAGAGTACGCAGCATTGAAATTACATCTTaGCTCCCAAAACAGGAAGGC +
Preference number: 5 (lower is better)
Translates to: IRENGFAHYSSSVSRVRSIEITS*LPKQEG
Trigger: GCCTTCCTGTTTTGGGAGCAAAGATGTAATTTCAAT...GCTGCGTACTCTGCTAACCGAGCTAGAGTAGTGAGCAAAGCCATTTTCTCTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS TCA 90 bp AAGGTCGGCACCTTATTGTGTACTGAGGACAACATGTTTGATTCATaGCAGGTTTGTACACATATTTTCCACTTCTTCGCCATCCTCGGT +
Preference number: 5 (lower is better)
Translates to: KVGTLLCTEDNMFDS*QVCTHIFHFFAILG
Trigger: ACCGAGGATGGCGAAGAAGTGGAAAATATGTGTACAAACCTGTCATGAATCAAACATGTTGTCCTCAGTACACAATAAGGTGCCGACCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CAA 90 bp CATGCTAATCACAAAGACAAATGGAGGGAAGATACAGTGATAACACCAAGTTGGAAGGTCGGCACCTTATaGTGTACTGAGGACAACATG +
Preference number: 5 (lower is better)
Translates to: HANHKDKWREDTVITPSWKVGTL*CTEDNM
Trigger: CATGTTGTCCTCAGTACACAATAAGGTGCCGACCTT...CCAACTTGGTGTTATCACTGTATCTTCCCTCCATTTGTCTTTGTGATTAGCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CAA 90 bp ATTTTACATGCTAATCACAAAGACAAATGGAGGGAAGATACAGTGATAACACCAAGATGGTGGGTGACCTaGAGCCTGGAAACCCTCAAG +
Preference number: 5 (lower is better)
Translates to: ILHANHKDKWREDTVITPRWWVT*SLETLK
Trigger: CTTGAGGGTTTCCAGGCTCAAGGTCACCCACCATCT...TGGTGTTATCACTGTATCTTCCCTCCATTTGTCTTTGTGATTAGCATGTAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CAA 90 bp TCCCCACAGGTACTGAATATGTATCCTGGCACAAATCATCAGCACAACACAGGAAGTGATAACACCAAGTaGGACATTCAAATGCTAAGC +
Preference number: 5 (lower is better)
Translates to: SPQVLNMYPGTNHQHNTGSDNTK*DIQMLS
Trigger: GCTTAGCATTTGAATGTCCAACTTGGTGTTATCACT...TCCTGTGTTGTGCTGATGATTTGTGCCAGGATACATATTCAGTACCTGTGGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CAA 90 bp AGTAGAAGGATCTCCAATGCTCAAGTCACTCTGAGTCTTTGCTGGTGTCAACCTAGTGATAACACCAAGTaGGACATTCAAATGCTAAGC +
Preference number: 5 (lower is better)
Translates to: SRRISNAQVTLSLCWCQPSDNTK*DIQMLS
Trigger: GCTTAGCATTTGAATGTCCAACTTGGTGTTATCACT...AGGTTGACACCAGCAAAGACTCAGAGTGACTTGAGCATTGGAGATCCTTCTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CAA 90 bp CCCACAGGTACTGAATATGTATCCTGGCACAAATCATCAGCACAACACAGGAACAGTTGTGGTAAGATGTaGGAGTCAAGTTTTCTCTTC +
Preference number: 5 (lower is better)
Translates to: PTGTEYVSWHKSSAQHRNSCGKM*ESSFLF
Trigger: GAAGAGAAAACTTGACTCCAACATCTTACCACAACT...GTTCCTGTGTTGTGCTGATGATTTGTGCCAGGATACATATTCAGTACCTGTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CAA 90 bp AGTAGAAGGATCTCCAATGCTCAAGTCACTCTGAGTCTTTGCTGGTGTCAACCTAGTTGTGGTAAGATGTaGGAGTCAAGTTTTCTCTTC +
Preference number: 5 (lower is better)
Translates to: SRRISNAQVTLSLCWCQPSCGKM*ESSFLF
Trigger: GAAGAGAAAACTTGACTCCAACATCTTACCACAACT...AGGTTGACACCAGCAAAGACTCAGAGTGACTTGAGCATTGGAGATCCTTCTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CAA 90 bp CTGCTGTTTCTTATAAACACCGTAAGGCATGATGGCTCTCTTGTGAAACACCTGCTCTCTAAACTCTCTTaGATGTCATCACTGAGTGTT +
Preference number: 5 (lower is better)
Translates to: LLFLINTVRHDGSLVKHLLSKLS*MSSLSV
Trigger: AACACTCAGTGATGACATCAAAGAGAGTTTAGAGAG...CAGGTGTTTCACAAGAGAGCCATCATGCCTTACGGTGTTTATAAGAAACAGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423243.6
CDS-3UTR CAA 90 bp CATGCTAATCACAAAGACAAATGGAGGGAAGATACAGTGATAACACCAAGTTGGTTGAAACGGCAGTACTaGGAGTTTTCAAGTGAAGGC +
Preference number: 5 (lower is better)
Translates to: HANHKDKWREDTVITPSWLKRQY*EFSSEG
Trigger: GCCTTCACTTGAAAACTCCAAGTACTGCCGTTTCAA...CCAACTTGGTGTTATCACTGTATCTTCCCTCCATTTGTCTTTGTGATTAGCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CAA 90 bp CCCACAGGTACTGAATATGTATCCTGGCACAAATCATCAGCACAACACAGGAACAGACACTTTGACTACTaGGATCAATACACTAGCTAT +
Preference number: 5 (lower is better)
Translates to: PTGTEYVSWHKSSAQHRNRHFDY*DQYTSY
Trigger: ATAGCTAGTGTATTGATCCAAGTAGTCAAAGTGTCT...GTTCCTGTGTTGTGCTGATGATTTGTGCCAGGATACATATTCAGTACCTGTGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CAA 90 bp AGTAGAAGGATCTCCAATGCTCAAGTCACTCTGAGTCTTTGCTGGTGTCAACCTAGACACTTTGACTACTaGGATCAATACACTAGCTAT +
Preference number: 5 (lower is better)
Translates to: SRRISNAQVTLSLCWCQPRHFDY*DQYTSY
Trigger: ATAGCTAGTGTATTGATCCAAGTAGTCAAAGTGTCT...AGGTTGACACCAGCAAAGACTCAGAGTGACTTGAGCATTGGAGATCCTTCTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CAA 90 bp GATCAATACACTAGCTATTCTCAAACCAACATAATGCATGAATACAGCAGCCAATGGCTGAAAGACGACTaGAACTCTGGGTCCTCAAAG +
Preference number: 5 (lower is better)
Translates to: DQYTSYSQTNIMHEYSSQWLKDD*NSGSSK
Trigger: CTTTGAGGACCCAGAGTTCAAGTCGTCTTTCAGCCA...TTGGCTGCTGTATTCATGCATTATGTTGGTTTGAGAATAGCTAGTGTATTGATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CAA 90 bp GATCAATACACTAGCTATTCTCAAACCAACATAATGCATGAATACAGCAGCCAAAAGGTCGGCACCTTATaGTGTACTGAGGACAACATG +
Preference number: 5 (lower is better)
Translates to: DQYTSYSQTNIMHEYSSQKVGTL*CTEDNM
Trigger: CATGTTGTCCTCAGTACACAATAAGGTGCCGACCTT...TTGGCTGCTGTATTCATGCATTATGTTGGTTTGAGAATAGCTAGTGTATTGATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CAA 90 bp ATTTTACATGCTAATCACAAAGACAAATGGAGGGAAGATACAGTGATAACACCATCCTCACAACTTCCTTaGGGAACCTCCCCTTTAGCT +
Preference number: 5 (lower is better)
Translates to: ILHANHKDKWREDTVITPSSQLP*GTSPLA
Trigger: AGCTAAAGGGGAGGTTCCCAAAGGAAGTTGTGAGGA...TGGTGTTATCACTGTATCTTCCCTCCATTTGTCTTTGTGATTAGCATGTAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CAA 90 bp GATCAATACACTAGCTATTCTCAAACCAACATAATGCATGAATACAGCAGCCAATCAGAGAAAATGGCTTaGCTCACTACTCTAGCTCGG +
Preference number: 5 (lower is better)
Translates to: DQYTSYSQTNIMHEYSSQSEKMA*LTTLAR
Trigger: CCGAGCTAGAGTAGTGAGCAAAGCCATTTTCTCTGA...TTGGCTGCTGTATTCATGCATTATGTTGGTTTGAGAATAGCTAGTGTATTGATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CAA 90 bp CATGCTAATCACAAAGACAAATGGAGGGAAGATACAGTGATAACACCAAGTTGGGACACAACACTAAGATaGCAAATGCAAAGCTTCCTG +
Preference number: 5 (lower is better)
Translates to: HANHKDKWREDTVITPSWDTTLR*QMQSFL
Trigger: CAGGAAGCTTTGCATTTGCAATCTTAGTGTTGTGTC...CCAACTTGGTGTTATCACTGTATCTTCCCTCCATTTGTCTTTGTGATTAGCATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CAA 90 bp CATGCTAATCACAAAGACAAATGGAGGGAAGATACAGTGATAACACCAAGTTGGTACAAACAGGAGAATTaGAGCGTATCTTGCTCTAGA +
Preference number: 5 (lower is better)
Translates to: HANHKDKWREDTVITPSWYKQEN*SVSCSR
Trigger: TCTAGAGCAAGATACGCTCAAATTCTCCTGTTTGTA...CCAACTTGGTGTTATCACTGTATCTTCCCTCCATTTGTCTTTGTGATTAGCATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CAA 90 bp GATCAATACACTAGCTATTCTCAAACCAACATAATGCATGAATACAGCAGCCAAAGAAATGCGGCTGACTaGGATGTTGAGTTTCTAGAG +
Preference number: 5 (lower is better)
Translates to: DQYTSYSQTNIMHEYSSQRNAAD*DVEFLE
Trigger: CTCTAGAAACTCAACATCCAAGTCAGCCGCATTTCT...TTGGCTGCTGTATTCATGCATTATGTTGGTTTGAGAATAGCTAGTGTATTGATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CAA 90 bp CATGCTAATCACAAAGACAAATGGAGGGAAGATACAGTGATAACACCAAGTTGGAGTTGTGGTAAGATGTaGGAGTCAAGTTTTCTCTTC +
Preference number: 5 (lower is better)
Translates to: HANHKDKWREDTVITPSWSCGKM*ESSFLF
Trigger: GAAGAGAAAACTTGACTCCAACATCTTACCACAACT...CCAACTTGGTGTTATCACTGTATCTTCCCTCCATTTGTCTTTGTGATTAGCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CAA 90 bp CATGCTAATCACAAAGACAAATGGAGGGAAGATACAGTGATAACACCAAGTTGGAGACACTTTGACTACTaGGATCAATACACTAGCTAT +
Preference number: 5 (lower is better)
Translates to: HANHKDKWREDTVITPSWRHFDY*DQYTSY
Trigger: ATAGCTAGTGTATTGATCCAAGTAGTCAAAGTGTCT...CCAACTTGGTGTTATCACTGTATCTTCCCTCCATTTGTCTTTGTGATTAGCATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CAA 90 bp GATCAATACACTAGCTATTCTCAAACCAACATAATGCATGAATACAGCAGCCAAGACACAACACTAAGATaGCAAATGCAAAGCTTCCTG +
Preference number: 5 (lower is better)
Translates to: DQYTSYSQTNIMHEYSSQDTTLR*QMQSFL
Trigger: CAGGAAGCTTTGCATTTGCAATCTTAGTGTTGTGTC...TTGGCTGCTGTATTCATGCATTATGTTGGTTTGAGAATAGCTAGTGTATTGATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CAA 90 bp GATCAATACACTAGCTATTCTCAAACCAACATAATGCATGAATACAGCAGCCAACTCTCTAAACTCTCTTaGATGTCATCACTGAGTGTT +
Preference number: 5 (lower is better)
Translates to: DQYTSYSQTNIMHEYSSQLSKLS*MSSLSV
Trigger: AACACTCAGTGATGACATCAAAGAGAGTTTAGAGAG...TTGGCTGCTGTATTCATGCATTATGTTGGTTTGAGAATAGCTAGTGTATTGATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CAA 90 bp ATTTTACATGCTAATCACAAAGACAAATGGAGGGAAGATACAGTGATAACACCAGACACAACACTAAGATaGCAAATGCAAAGCTTCCTG +
Preference number: 5 (lower is better)
Translates to: ILHANHKDKWREDTVITPDTTLR*QMQSFL
Trigger: CAGGAAGCTTTGCATTTGCAATCTTAGTGTTGTGTC...TGGTGTTATCACTGTATCTTCCCTCCATTTGTCTTTGTGATTAGCATGTAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CAA 90 bp ATTTTACATGCTAATCACAAAGACAAATGGAGGGAAGATACAGTGATAACACCACTTGTGAACTCTAACTaGTGTGATGCATTCTCTGGT +
Preference number: 5 (lower is better)
Translates to: ILHANHKDKWREDTVITPLVNSN*CDAFSG
Trigger: ACCAGAGAATGCATCACACAAGTTAGAGTTCACAAG...TGGTGTTATCACTGTATCTTCCCTCCATTTGTCTTTGTGATTAGCATGTAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369040.8
CDS-3UTR CAA 90 bp ATTTTACATGCTAATCACAAAGACAAATGGAGGGAAGATACAGTGATAACACCACTGAGGACAACATGTTaGATTCATGACAGGTTTGTA +
Preference number: 5 (lower is better)
Translates to: ILHANHKDKWREDTVITPLRTTC*IHDRFV
Trigger: TACAAACCTGTCATGAATCAAACATGTTGTCCTCAG...TGGTGTTATCACTGTATCTTCCCTCCATTTGTCTTTGTGATTAGCATGTAAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS-3UTR CAA 90 bp ATTTTACATGCTAATCACAAAGACAAATGGAGGGAAGATACAGTGATAACACCAATTGAAATTACATCTTaGCTCCCAAAACAGGAAGGC +
Preference number: 5 (lower is better)
Translates to: ILHANHKDKWREDTVITPIEITS*LPKQEG
Trigger: GCCTTCCTGTTTTGGGAGCAAAGATGTAATTTCAAT...TGGTGTTATCACTGTATCTTCCCTCCATTTGTCTTTGTGATTAGCATGTAAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS TCA 72 bp CCTTGGAATCGCAGTAGCCGCAGTGGTAGCCGGCCCTaGGGCCCTTGTATTCCACCACCGACGCCATGGCCG +
Preference number: 6 (lower is better)
Translates to: PWNRSSRSGSRP*GPCIPPPTPWP
Trigger: CGGCCATGGCGTCGGTGGTGGAATACAAGGGCCTCAGGGCCGGCTACCACTGCGGCTACTGCGATTCCAAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540606.6
CDS TCA 72 bp TTGAAGGATGCAAAGTACCGATCCTCGGTGTGTCTGTaGGGGTGCTGCTTCTGGGTCCTGGTTGAAACGGCA +
Preference number: 6 (lower is better)
Translates to: LKDAKYRSSVCL*GCCFWVLVETA
Trigger: TGCCGTTTCAACCAGGACCCAGAAGCAGCACCCTCACAGACACACCGAGGATCGGTACTTTGCATCCTTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485281.1
CDS CAA 72 bp CGGTGTGTCTGTGAGGGTGCTGCTTCTGGGTCCTGGTaGAAACGGCAGTACTTGGAGTTTTCAAGTGAAGGC +
Preference number: 6 (lower is better)
Translates to: RCVCEGAASGSW*KRQYLEFSSEG
Trigger: GCCTTCACTTGAAAACTCCAAGTACTGCCGTTTCAACCAGGACCCAGAAGCAGCACCCTCACAGACACACCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485281.1
CDS TCA 72 bp GGTGTGTCTGTGAGGGTGCTGCTTCTGGGTCCTGGTTaGAACGGCAGTACTTGGAGTTTTCAAGTGAAGGCA +
Preference number: 6 (lower is better)
Translates to: GVSVRVLLLGPG*NGSTWSFQVKA
Trigger: TGCCTTCACTTGAAAACTCCAAGTACTGCCGTTTCAACCAGGACCCAGAAGCAGCACCCTCACAGACACACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485281.1
CDS CCA 72 bp CCTCGGTGTGTCTGTGAGGGTGCTGCTTCTGGGTCCTaGTTGAAACGGCAGTACTTGGAGTTTTCAAGTGAA +
Preference number: 6 (lower is better)
Translates to: PRCVCEGAASGS*LKRQYLEFSSE
Trigger: TTCACTTGAAAACTCCAAGTACTGCCGTTTCAACCAGGACCCAGAAGCAGCACCCTCACAGACACACCGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485281.1
CDS TCA 72 bp GTTTATAGACCTGGTAAGACTCCAGAAGTGTGGCTTTaGACTGCGAACTTGGTGGAGATGATCTCACCACCC +
Preference number: 6 (lower is better)
Translates to: VYRPGKTPEVWL*TANLVEMISPP
Trigger: GGGTGGTGAGATCATCTCCACCAAGTTCGCAGTTCAAAGCCACACTTCTGGAGTCTTACCAGGTCTATAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224652.11
CDS GCA 72 bp GTTAATACTGAGTGTCAACTTGATTGGATTGAAGGATaGAAAGTACCGATCCTCGGTGTGTCTGTGAGGGTG +
Preference number: 6 (lower is better)
Translates to: VNTECQLDWIEG*KVPILGVSVRV
Trigger: CACCCTCACAGACACACCGAGGATCGGTACTTTGCATCCTTCAATCCAATCAAGTTGACACTCAGTATTAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485281.1
CDS TCA 72 bp ACACATATTTTCCACTTCTTCGCCATCCTCGGTCTATaGGATCCTGATAATCCTGTACTGTCATGGAATGTG +
Preference number: 6 (lower is better)
Translates to: THIFHFFAILGL*DPDNPVLSWNV
Trigger: CACATTCCATGACAGTACAGGATTATCAGGATCTCATAGACCGAGGATGGCGAAGAAGTGGAAAATATGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6
CDS CCA 72 bp GAATCTTGTGAACTGGCTTTCGGTTGGCGTATCAGGTaGGTTCTTGTGAATAACCATCTGGTAACGTTTATA +
Preference number: 6 (lower is better)
Translates to: ESCELAFGWRIR*VLVNNHLVTFI
Trigger: TATAAACGTTACCAGATGGTTATTCACAAGAACCCACCTGATACGCCAACCGAAAGCCAGTTCACAAGATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224652.11
CDS CAA 72 bp AGGTCGGCACCTTATTGTGTACTGAGGACAACATGTTaGATTCATGACAGGTTTGTACACATATTTTCCACT +
Preference number: 6 (lower is better)
Translates to: RSAPYCVLRTTC*IHDRFVHIFST
Trigger: AGTGGAAAATATGTGTACAAACCTGTCATGAATCAAACATGTTGTCCTCAGTACACAATAAGGTGCCGACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224652.11
ENST00000369040.8
ENST00000369043.8
ENST00000540606.6