RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ATCAY (Homo sapiens)

Ensembl gene IDs: ENSG00000167654

Ensembl transcript IDs: ENST00000450849.7, ENST00000595916.5, ENST00000597739.1, ENST00000598136.5, ENST00000600960.1

Found 664 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ACGGTGCAGGTCGTGGCCCAGCTGGGAACGGTGGCCCCGGCTGTTTaGCCTCGGCATGCCTGCCGACAGGTGGCCTCGCCGGGGGCCTCT +
Preference number: 1 (lower is better)
Translates to: TVQVVAQLGTVAPAV*PRHACRQVASPGAS
Trigger: AGAGGCCCCCGGCGAGGCCACCTGTCGGCAGGCATGCCGAGGTCAAACAGCCGGGGCCACCGTTCCCAGCTGGGCCACGACCTGCACCGT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450849.7
3UTR GCA 90 bp GGAGCGGAGGCCACCGACGCCACGCGGGCCACCCCCTGCGCTTCTTaGCTTCCTCGGCTGAGAGTTCGTGAGTGTGGAAGGGTGAGGGGC +
Preference number: 1 (lower is better)
Translates to: GAEATDATRATPCAS*LPRLRVRECGRVRG
Trigger: GCCCCTCACCCTTCCACACTCACGAACTCTCAGCCGAGGAAGGCAAGAAGCGCAGGGGGTGGCCCGCGTGGCGTCGGTGGCCTCCGCTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000450849.7
ENST00000597739.1
ENST00000600960.1
3UTR GCA 90 bp CTGTCCGCCACAGGCGCCCGTTGGCGGCGCTGCCGTCCTCCGTCGTaGCGTCCCCAAATAGATCCGCGCTGTCCCCGGGCATGTTCTTGG +
Preference number: 1 (lower is better)
Translates to: LSATGARWRRCRPPS*RPQIDPRCPRACSW
Trigger: CCAAGAACATGCCCGGGGACAGCGCGGATCTATTTGGGGACGGCACGACGGAGGACGGCAGCGCCGCCAACGGGCGCCTGTGGCGGACAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597739.1
3UTR GCA 90 bp CTGCGAGCAGGAGCGGAGGCCACCGACGCCACGCGGGCCACCCCCTaGGCTTCTTGCCTTCCTCGGCTGAGAGTTCGTGAGTGTGGAAGG +
Preference number: 1 (lower is better)
Translates to: LRAGAEATDATRATP*ASCLPRLRVRECGR
Trigger: CCTTCCACACTCACGAACTCTCAGCCGAGGAAGGCAAGAAGCGCAGGGGGTGGCCCGCGTGGCGTCGGTGGCCTCCGCTCCTGCTCGCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000450849.7
ENST00000597739.1
ENST00000600960.1
3UTR TCA 90 bp AAGGCCGGATCATGTGCAGGTCTATACGGTGCTCTTGCTCCCCGATaGTCACTGTCCGCCACAGGCGCCCGTTGGCGGCGCTGCCGTCCT +
Preference number: 1 (lower is better)
Translates to: KAGSCAGLYGALAPR*SLSATGARWRRCRP
Trigger: AGGACGGCAGCGCCGCCAACGGGCGCCTGTGGCGGACAGTGATCATCGGGGAGCAAGAGCACCGTATAGACCTGCACATGATCCGGCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597739.1
3UTR GCA 90 bp AAGAGAAGGGTCTTGAATCTTGTATCCAGCTCTGACCACAGAGGCTaGGAGCAGGAGCGGAGGCCACCGACGCCACGCGGGCCACCCCCT +
Preference number: 1 (lower is better)
Translates to: KRRVLNLVSSSDHRG*EQERRPPTPRGPPP
Trigger: AGGGGGTGGCCCGCGTGGCGTCGGTGGCCTCCGCTCCTGCTCGCAGCCTCTGTGGTCAGAGCTGGATACAAGATTCAAGACCCTTCTCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000450849.7
ENST00000597739.1
ENST00000600960.1
3UTR TCA 90 bp AGTTGGGGTCTTCAGTTTCGCCTGCCTGTTGTCTGTGACTGCTGGTaGTCCAAAGGGGCGTGGGTGGGCCACGGCATAACGGGCGGACCC +
Preference number: 1 (lower is better)
Translates to: SWGLQFRLPVVCDCW*SKGAWVGHGITGGP
Trigger: GGGTCCGCCCGTTATGCCGTGGCCCACCCACGCCCCTTTGGATCACCAGCAGTCACAGACAACAGGCAGGCGAAACTGAAGACCCCAACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450849.7
3UTR CCA 90 bp AGCACTTCTTCAGCCAGCCGATTCCAGGCATCCTCCGCCGGGGCGTaGCACCGTTCAGGTACACGATCATGTAGTCCTCAGCCACCAGGA +
Preference number: 1 (lower is better)
Translates to: STSSASRFQASSAGA*HRSGTRSCSPQPPG
Trigger: TCCTGGTGGCTGAGGACTACATGATCGTGTACCTGAACGGTGCCACGCCCCGGCGGAGGATGCCTGGAATCGGCTGGCTGAAGAAGTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597739.1
3UTR CCA 90 bp TTCCAACCCGGAACAGCGTTGGCGTGTCCCAGCCTGACGCTGGGTTaGGGGAGCAGTGAGGTCCACATATCTCATTCCTTGGTGGGAGGT +
Preference number: 1 (lower is better)
Translates to: FQPGTALACPSLTLG*GSSEVHISHSLVGG
Trigger: ACCTCCCACCAAGGAATGAGATATGTGGACCTCACTGCTCCCCCAACCCAGCGTCAGGCTGGGACACGCCAACGCTGTTCCGGGTTGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
3UTR CCA 90 bp CTGCTCAGAAACCCCGTCTTCCTCATGGCAGGAGCTGCTGGCTTTTaGGGATGGGACTCGCGCAGGACCCTGTCCCACAGGGCAAATCTT +
Preference number: 1 (lower is better)
Translates to: LLRNPVFLMAGAAGF*GWDSRRTLSHRANL
Trigger: AAGATTTGCCCTGTGGGACAGGGTCCTGCGCGAGTCCCATCCCCAAAAGCCAGCAGCTCCTGCCATGAGGAAGACGGGGTTTCTGAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450849.7
3UTR CCA 90 bp GATTCATGCTGGAGCTGCGTGCCTTTGGTCACCTGGGACAAATCGTaGCAGCTGGGCCTGGCTGGCATCTATCTGCTGGAGCCTGTCTCC +
Preference number: 1 (lower is better)
Translates to: DSCWSCVPLVTWDKS*QLGLAGIYLLEPVS
Trigger: GGAGACAGGCTCCAGCAGATAGATGCCAGCCAGGCCCAGCTGCCACGATTTGTCCCAGGTGACCAAAGGCACGCAGCTCCAGCATGAATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450849.7
3UTR GCA 90 bp TCACCTGGGACAAATCGTGGCAGCTGGGCCTGGCTGGCATCTATCTaGTGGAGCCTGTCTCCTCCGGGCAGTCTGATAATCAGGCTTCTG +
Preference number: 1 (lower is better)
Translates to: SPGTNRGSWAWLASI*WSLSPPGSLIIRLL
Trigger: CAGAAGCCTGATTATCAGACTGCCCGGAGGAGACAGGCTCCAGCAGATAGATGCCAGCCAGGCCCAGCTGCCACGATTTGTCCCAGGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450849.7
3UTR CCA 90 bp CCTGGGACAAATCGTGGCAGCTGGGCCTGGCTGGCATCTATCTGCTaGAGCCTGTCTCCTCCGGGCAGTCTGATAATCAGGCTTCTGTCA +
Preference number: 1 (lower is better)
Translates to: PGTNRGSWAWLASIC*SLSPPGSLIIRLLS
Trigger: TGACAGAAGCCTGATTATCAGACTGCCCGGAGGAGACAGGCTCCAGCAGATAGATGCCAGCCAGGCCCAGCTGCCACGATTTGTCCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450849.7
3UTR TCA 90 bp AGTCATCGGACAGCAGGGACCCCTCACTCTGATCCAGAGAAATGTTaGTCTCTGGGGCCACCAGCGTCTTCCTCTTACGATGCGCTCCGT +
Preference number: 1 (lower is better)
Translates to: SHRTAGTPHSDPEKC*SLGPPASSSYDALR
Trigger: ACGGAGCGCATCGTAAGAGGAAGACGCTGGTGGCCCCAGAGATCAACATTTCTCTGGATCAGAGTGAGGGGTCCCTGCTGTCCGATGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597739.1
3UTR CCA 90 bp CCACTTTTGTCATCTTGTGTTGGCTTTGGCAGCGACACCATTCACTaGGGTGGGAATTCGGGACAGGGTCTTGCCCCTGTGCCCGGGATT +
Preference number: 1 (lower is better)
Translates to: PLLSSCVGFGSDTIH*GGNSGQGLAPVPGI
Trigger: AATCCCGGGCACAGGGGCAAGACCCTGTCCCGAATTCCCACCCCAGTGAATGGTGTCGCTGCCAAAGCCAACACAAGATGACAAAAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450849.7
3UTR CCA 90 bp TGTCACTGTTGGGTTAGAACGATTCATGCTGGAGCTGCGTGCCTTTaGTCACCTGGGACAAATCGTGGCAGCTGGGCCTGGCTGGCATCT +
Preference number: 1 (lower is better)
Translates to: CHCWVRTIHAGAACL*SPGTNRGSWAWLAS
Trigger: AGATGCCAGCCAGGCCCAGCTGCCACGATTTGTCCCAGGTGACCAAAGGCACGCAGCTCCAGCATGAATCGTTCTAACCCAACAGTGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450849.7
3UTR CCA 90 bp GAAGAGGTTCTCCATGATGTAGTGGTAGTCGGGGAGGCTGCTGTCTaGAAGGAAGCAGGCTGCGAAGACGATGATGGCGTTGAGGCCTTC +
Preference number: 1 (lower is better)
Translates to: EEVLHDVVVVGEAAV*KEAGCEDDDGVEAF
Trigger: GAAGGCCTCAACGCCATCATCGTCTTCGCAGCCTGCTTCCTTCCAGACAGCAGCCTCCCCGACTACCACTACATCATGGAGAACCTCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597739.1
3UTR CCA 90 bp AAAGGGCGAGAGATGGCCAGCACAGTCCGAATGAACCACGAGGGGTaGACGATGATCAAGGACTTCAGGTTTTTCCGCAACCTCCGGTCG +
Preference number: 1 (lower is better)
Translates to: KGREMASTVRMNHEG*TMIKDFRFFRNLRS
Trigger: CGACCGGAGGTTGCGGAAAAACCTGAAGTCCTTGATCATCGTCCACCCCTCGTGGTTCATTCGGACTGTGCTGGCCATCTCTCGCCCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597739.1
3UTR TCA 90 bp CTAGGGAAATTTGCCTCCCGAACAAGAACCCGCTGGTCCAAGCTTTaGATGCAGGTGGCTGCGGCCAGCGCACTGGATTTATCTTCCCGA +
Preference number: 1 (lower is better)
Translates to: LGKFASRTRTRWSKL*MQVAAASALDLSSR
Trigger: TCGGGAAGATAAATCCAGTGCGCTGGCCGCAGCCACCTGCATTCAAAGCTTGGACCAGCGGGTTCTTGTTCGGGAGGCAAATTTCCCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
3UTR GCA 90 bp GCTGAGAGGTCAACCACAGAGCTAGGAAGAAGGGCCTGGAGAATGTaGCCGCCCTACTCACCGTCTGCTCAGACTGATAGACATGAAGAC +
Preference number: 1 (lower is better)
Translates to: AERSTTELGRRAWRM*PPYSPSAQTDRHED
Trigger: GTCTTCATGTCTATCAGTCTGAGCAGACGGTGAGTAGGGCGGGCACATTCTCCAGGCCCTTCTTCCTAGCTCTGTGGTTGACCTCTCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450849.7
3UTR CCA 90 bp TTTGTCATCTTGTGTTGGCTTTGGCAGCGACACCATTCACTGGGGTaGGAATTCGGGACAGGGTCTTGCCCCTGTGCCCGGGATTTGACA +
Preference number: 1 (lower is better)
Translates to: FVILCWLWQRHHSLG*EFGTGSCPCARDLT
Trigger: TGTCAAATCCCGGGCACAGGGGCAAGACCCTGTCCCGAATTCCCACCCCAGTGAATGGTGTCGCTGCCAAAGCCAACACAAGATGACAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450849.7
3UTR TCA 90 bp CTGTATCTTCCTCTTGCTAGGTCTGCCTATTTCAGAGCCAGTTTCTaGGCCTCTGCTGTTCCAACCCGGAACAGCGTTGGCGTGTCCCAG +
Preference number: 1 (lower is better)
Translates to: LYLPLARSAYFRASF*ASAVPTRNSVGVSQ
Trigger: CTGGGACACGCCAACGCTGTTCCGGGTTGGAACAGCAGAGGCTCAGAAACTGGCTCTGAAATAGGCAGACCTAGCAAGAGGAAGATACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
3UTR GCA 90 bp ACTCGCGCAGGACCCTGTCCCACAGGGCAAATCTTTCTGTATCACTaGCCCTCAGCACTAAATACCACCAGTTCCCTGCCATCATCGTTG +
Preference number: 1 (lower is better)
Translates to: TRAGPCPTGQIFLYH*PSALNTTSSLPSSL
Trigger: CAACGATGATGGCAGGGAACTGGTGGTATTTAGTGCTGAGGGGCAGTGATACAGAAAGATTTGCCCTGTGGGACAGGGTCCTGCGCGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450849.7
3UTR CCA 90 bp GCAATCGGAGGACAAGGATGGTTGGCAGCGGCTCTTCTTGTGCAATaGGCTCTGATCCTCTCAAAGGAGCTGGGTGTCATTATGAGCGAG +
Preference number: 1 (lower is better)
Translates to: AIGGQGWLAAALLVQ*ALILSKELGVIMSE
Trigger: CTCGCTCATAATGACACCCAGCTCCTTTGAGAGGATCAGAGCCCATTGCACAAGAAGAGCCGCTGCCAACCATCCTTGTCCTCCGATTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
3UTR CCA 90 bp ATAGCACTTGCTGAGAGGTCAACCACAGAGCTAGGAAGAAGGGCCTaGAGAATGTGCCCGCCCTACTCACCGTCTGCTCAGACTGATAGA +
Preference number: 1 (lower is better)
Translates to: IALAERSTTELGRRA*RMCPPYSPSAQTDR
Trigger: TCTATCAGTCTGAGCAGACGGTGAGTAGGGCGGGCACATTCTCCAGGCCCTTCTTCCTAGCTCTGTGGTTGACCTCTCAGCAAGTGCTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450849.7
3UTR TCA 90 bp GGTGGCTGCGGCCAGCGCACTGGATTTATCTTCCCGAATGACTTCTaGAACACTCAAACGCCCGATACCCTGTATCTTCCTCTTGCTAGG +
Preference number: 1 (lower is better)
Translates to: GGCGQRTGFIFPNDF*NTQTPDTLYLPLAR
Trigger: CCTAGCAAGAGGAAGATACAGGGTATCGGGCGTTTGAGTGTTTCAGAAGTCATTCGGGAAGATAAATCCAGTGCGCTGGCCGCAGCCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
3UTR TCA 90 bp TCAGTTAATTGTGGGTCTGGTTGGCCCAGCCTGGATAGCACTTGCTaGGAGGTCAACCACAGAGCTAGGAAGAAGGGCCTGGAGAATGTG +
Preference number: 1 (lower is better)
Translates to: SVNCGSGWPSLDSTC*EVNHRARKKGLENV
Trigger: CACATTCTCCAGGCCCTTCTTCCTAGCTCTGTGGTTGACCTCTCAGCAAGTGCTATCCAGGCTGGGCCAACCAGACCCACAATTAACTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450849.7
3UTR TCA 90 bp GCAATTCCTTGCTGTCTCAGGTCAAGATGCACTGGACGCTTTCACTaGGGCTCAGTTAATTGTGGGTCTGGTTGGCCCAGCCTGGATAGC +
Preference number: 1 (lower is better)
Translates to: AIPCCLRSRCTGRFH*GSVNCGSGWPSLDS
Trigger: GCTATCCAGGCTGGGCCAACCAGACCCACAATTAACTGAGCCTCAGTGAAAGCGTCCAGTGCATCTTGACCTGAGACAGCAAGGAATTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450849.7
3UTR GCA 90 bp TGCAGGACGCAGTCTGGGATCTGGACGTGTTCCATAGGGATGAGTTaGTCCAGGTCTTCCAAGCTGTGCACGTACTGGATCTTGTTGATG +
Preference number: 1 (lower is better)
Translates to: CRTQSGIWTCSIGMS*SRSSKLCTYWILLM
Trigger: CATCAACAAGATCCAGTACGTGCACAGCTTGGAAGACCTGGAGCAACTCATCCCTATGGAACACGTCCAGATCCCAGACTGCGTCCTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597739.1
3UTR CCA 90 bp GGCAGGATGAGATCTGGGGCCAGTGGGCGTCTGACAGAGGTTTTCTaGCATCTGGAATCTTCTTCCATGTCCTTTGTTATGCTCACGTCG +
Preference number: 1 (lower is better)
Translates to: GRMRSGASGRLTEVF*HLESSSMSFVMLTS
Trigger: CGACGTGAGCATAACAAAGGACATGGAAGAAGATTCCAGATGCCAGAAAACCTCTGTCAGACGCCCACTGGCCCCAGATCTCATCCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000450849.7
ENST00000597739.1
ENST00000600960.1
3UTR CCA 90 bp GCTTTCACTGAGGCTCAGTTAATTGTGGGTCTGGTTGGCCCAGCCTaGATAGCACTTGCTGAGAGGTCAACCACAGAGCTAGGAAGAAGG +
Preference number: 1 (lower is better)
Translates to: AFTEAQLIVGLVGPA*IALAERSTTELGRR
Trigger: CCTTCTTCCTAGCTCTGTGGTTGACCTCTCAGCAAGTGCTATCCAGGCTGGGCCAACCAGACCCACAATTAACTGAGCCTCAGTGAAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450849.7
3UTR CCA 90 bp GCCTTCAGTCTTTCCTCTTCGTATTGCAGGACGCAGTCTGGGATCTaGACGTGTTCCATAGGGATGAGTTGCTCCAGGTCTTCCAAGCTG +
Preference number: 1 (lower is better)
Translates to: AFSLSSSYCRTQSGI*TCSIGMSCSRSSKL
Trigger: CAGCTTGGAAGACCTGGAGCAACTCATCCCTATGGAACACGTCCAGATCCCAGACTGCGTCCTGCAATACGAAGAGGAAAGACTGAAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597739.1
3UTR GCA 90 bp GGCAGGCACCTTCTGGGTCAGGTAGGGCCTCACTTGTCACTTGATTaGTGCTGTAGACACTCAATTATTAGGTGTCCGATTGGGTGGAAT +
Preference number: 1 (lower is better)
Translates to: GRHLLGQVGPHLSLD*CCRHSIIRCPIGWN
Trigger: ATTCCACCCAATCGGACACCTAATAATTGAGTGTCTACAGCAGCAATCAAGTGACAAGTGAGGCCCTACCTGACCCAGAAGGTGCCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450849.7
3UTR GCA 90 bp AGGCACCTTCTGGGTCAGGTAGGGCCTCACTTGTCACTTGATTGCTaGTGTAGACACTCAATTATTAGGTGTCCGATTGGGTGGAATGAG +
Preference number: 1 (lower is better)
Translates to: RHLLGQVGPHLSLDC*CRHSIIRCPIGWNE
Trigger: CTCATTCCACCCAATCGGACACCTAATAATTGAGTGTCTACAGCAGCAATCAAGTGACAAGTGAGGCCCTACCTGACCCAGAAGGTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450849.7
3UTR GCA 90 bp TGGACGTGTTCCATAGGGATGAGTTGCTCCAGGTCTTCCAAGCTGTaGACGTACTGGATCTTGTTGATGAACTTGACGCTGATGAAAGGG +
Preference number: 1 (lower is better)
Translates to: WTCSIGMSCSRSSKL*TYWILLMNLTLMKG
Trigger: CCCTTTCATCAGCGTCAAGTTCATCAACAAGATCCAGTACGTGCACAGCTTGGAAGACCTGGAGCAACTCATCCCTATGGAACACGTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597739.1
3UTR CCA 90 bp TGTTCTAGATTACTGGGGTGTCATTTTGCAATCGGAGGACAAGGATaGTTGGCAGCGGCTCTTCTTGTGCAATGGGCTCTGATCCTCTCA +
Preference number: 1 (lower is better)
Translates to: CSRLLGCHFAIGGQG*LAAALLVQWALILS
Trigger: TGAGAGGATCAGAGCCCATTGCACAAGAAGAGCCGCTGCCAACCATCCTTGTCCTCCGATTGCAAAATGACACCCCAGTAATCTAGAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
3UTR CCA 90 bp TCCATAGGGATGAGTTGCTCCAGGTCTTCCAAGCTGTGCACGTACTaGATCTTGTTGATGAACTTGACGCTGATGAAAGGGCGAGAGATG +
Preference number: 1 (lower is better)
Translates to: SIGMSCSRSSKLCTY*ILLMNLTLMKGREM
Trigger: CATCTCTCGCCCTTTCATCAGCGTCAAGTTCATCAACAAGATCCAGTACGTGCACAGCTTGGAAGACCTGGAGCAACTCATCCCTATGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597739.1
3UTR GCA 90 bp TTGGACCACATTAGAAAAGTCTGTCTTCTTTTTCCTAGGGAAATTTaGCTCCCGAACAAGAACCCGCTGGTCCAAGCTTTGAATGCAGGT +
Preference number: 1 (lower is better)
Translates to: LDHIRKVCLLFPREI*LPNKNPLVQALNAG
Trigger: ACCTGCATTCAAAGCTTGGACCAGCGGGTTCTTGTTCGGGAGGCAAATTTCCCTAGGAAAAAGAAGACAGACTTTTCTAATGTGGTCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
3UTR-3UTR GCA 90 bp GGCTGCGAGCAGGAGCGGAGGCCACCGACGCCACGCGGGCCACCCCCTGCGCTTACGCGGGCCACCCCCTaGGCTTCTTGCCTTCCTCGG +
Preference number: 2 (lower is better)
Translates to: GCEQERRPPTPRGPPPALTRATP*ASCLPR
Trigger: CCGAGGAAGGCAAGAAGCGCAGGGGGTGGCCCGCGT...AAGCGCAGGGGGTGGCCCGCGTGGCGTCGGTGGCCTCCGCTCCTGCTCGCAGCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000450849.7
ENST00000597739.1
ENST00000600960.1
3UTR CAA 90 bp GACGGTGCAGGTCGTGGCCCAGCTGGGAACGGTGGCCCCGGCTGTTaGACCTCGGCATGCCTGCCGACAGGTGGCCTCGCCGGGGGCCTC +
Preference number: 2 (lower is better)
Translates to: DGAGRGPAGNGGPGC*TSACLPTGGLAGGL
Trigger: GAGGCCCCCGGCGAGGCCACCTGTCGGCAGGCATGCCGAGGTCAAACAGCCGGGGCCACCGTTCCCAGCTGGGCCACGACCTGCACCGTC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450849.7
3UTR-3UTR GCA 90 bp CGGAGGCCACCGACGCCACGCGGGCCACCCCCTGCGCTTCTTGCCTTCCTCGGCACGCGGGCCACCCCCTaGGCTTCTTGCCTTCCTCGG +
Preference number: 2 (lower is better)
Translates to: RRPPTPRGPPPALLAFLGTRATP*ASCLPR
Trigger: CCGAGGAAGGCAAGAAGCGCAGGGGGTGGCCCGCGT...GCCGAGGAAGGCAAGAAGCGCAGGGGGTGGCCCGCGTGGCGTCGGTGGCCTCCG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000450849.7
ENST00000597739.1
ENST00000600960.1
3UTR-3UTR TCA 90 bp CGGAGGCCACCGACGCCACGCGGGCCACCCCCTGCGCTTCTTGCCTTCCTCGGCTCGGCTGAGAGTTCGTaGGTGTGGAAGGGTGAGGGG +
Preference number: 2 (lower is better)
Translates to: RRPPTPRGPPPALLAFLGSAESS*VWKGEG
Trigger: CCCCTCACCCTTCCACACTCACGAACTCTCAGCCGA...GCCGAGGAAGGCAAGAAGCGCAGGGGGTGGCCCGCGTGGCGTCGGTGGCCTCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000450849.7
ENST00000597739.1
ENST00000600960.1
3UTR-3UTR TCA 90 bp GCAGGAGCGGAGGCCACCGACGCCACGCGGGCCACCCCCTGCGCTTCTTGCCTTGGGCCAGTGGGCGTCTaGCAGAGGTTTTCTGGCATC +
Preference number: 2 (lower is better)
Translates to: AGAEATDATRATPCASCLGPVGV*QRFSGI
Trigger: GATGCCAGAAAACCTCTGTCAGACGCCCACTGGCCC...AAGGCAAGAAGCGCAGGGGGTGGCCCGCGTGGCGTCGGTGGCCTCCGCTCCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000450849.7
ENST00000597739.1
ENST00000600960.1
3UTR-3UTR TCA 90 bp GCAGGAGCGGAGGCCACCGACGCCACGCGGGCCACCCCCTGCGCTTCTTGCCTTAGCTGGGTGTCATTATaGGCGAGAAGGGGGCGGGTC +
Preference number: 2 (lower is better)
Translates to: AGAEATDATRATPCASCLSWVSL*ARRGRV
Trigger: GACCCGCCCCCTTCTCGCTCATAATGACACCCAGCT...AAGGCAAGAAGCGCAGGGGGTGGCCCGCGTGGCGTCGGTGGCCTCCGCTCCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
3UTR CAA 90 bp CGGTGCTCTTGCTCCCCGATGATCACTGTCCGCCACAGGCGCCCGTaGGCGGCGCTGCCGTCCTCCGTCGTGCCGTCCCCAAATAGATCC +
Preference number: 2 (lower is better)
Translates to: RCSCSPMITVRHRRP*AALPSSVVPSPNRS
Trigger: GGATCTATTTGGGGACGGCACGACGGAGGACGGCAGCGCCGCCAACGGGCGCCTGTGGCGGACAGTGATCATCGGGGAGCAAGAGCACCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597739.1
3UTR-3UTR GCA 90 bp CGGAGGCCACCGACGCCACGCGGGCCACCCCCTGCGCTTCTTGCCTTCCTCGGCCCCACTCCAGTTCGTTaGCATTCCCCAGGAACTCCA +
Preference number: 2 (lower is better)
Translates to: RRPPTPRGPPPALLAFLGPTPVR*HSPGTP
Trigger: TGGAGTTCCTGGGGAATGGCAACGAACTGGAGTGGG...GCCGAGGAAGGCAAGAAGCGCAGGGGGTGGCCCGCGTGGCGTCGGTGGCCTCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000597739.1
3UTR-3UTR CCA 90 bp GACCTCGGCATGCCTGCCGACAGGTGGCCTCGCCGGGGGCCTCTTTTGCTCTGGCTGGCATCTATCTGCTaGAGCCTGTCTCCTCCGGGC +
Preference number: 2 (lower is better)
Translates to: DLGMPADRWPRRGPLLLWLASIC*SLSPPG
Trigger: GCCCGGAGGAGACAGGCTCCAGCAGATAGATGCCAG...CCAGAGCAAAAGAGGCCCCCGGCGAGGCCACCTGTCGGCAGGCATGCCGAGGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450849.7
3UTR-3UTR TCA 90 bp GACCTCGGCATGCCTGCCGACAGGTGGCCTCGCCGGGGGCCTCTTTTGCTCTGGACTCCTGACCTCAGGTaGTCCACCTGTCTCGGTCTC +
Preference number: 2 (lower is better)
Translates to: DLGMPADRWPRRGPLLLWTPDLR*STCLGL
Trigger: GAGACCGAGACAGGTGGATCACCTGAGGTCAGGAGT...CCAGAGCAAAAGAGGCCCCCGGCGAGGCCACCTGTCGGCAGGCATGCCGAGGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450849.7
3UTR-3UTR CCA 90 bp GCAGGAGCGGAGGCCACCGACGCCACGCGGGCCACCCCCTGCGCTTCTTGCCTTTCTGAGGCCGCATTCTaGAGGGAAAGGCACAGGAAA +
Preference number: 2 (lower is better)
Translates to: AGAEATDATRATPCASCLSEAAF*RERHRK
Trigger: TTTCCTGTGCCTTTCCCTCCAGAATGCGGCCTCAGA...AAGGCAAGAAGCGCAGGGGGTGGCCCGCGTGGCGTCGGTGGCCTCCGCTCCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
3UTR-3UTR TCA 90 bp GACCTCGGCATGCCTGCCGACAGGTGGCCTCGCCGGGGGCCTCTTTTGCTCTGGGGGTTGGGGGAGCAGTaGGGTCCACATATCTCATTC +
Preference number: 2 (lower is better)
Translates to: DLGMPADRWPRRGPLLLWGLGEQ*GPHISF
Trigger: GAATGAGATATGTGGACCTCACTGCTCCCCCAACCC...CCAGAGCAAAAGAGGCCCCCGGCGAGGCCACCTGTCGGCAGGCATGCCGAGGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000450849.7
3UTR-3UTR GCA 90 bp GACCTCGGCATGCCTGCCGACAGGTGGCCTCGCCGGGGGCCTCTTTTGCTCTGGGCAATCTCGGCTGACTaGAATCTCTGCCTCCTGGGT +
Preference number: 2 (lower is better)
Translates to: DLGMPADRWPRRGPLLLWAISAD*NLCLLG
Trigger: ACCCAGGAGGCAGAGATTGCAGTCAGCCGAGATTGC...CCAGAGCAAAAGAGGCCCCCGGCGAGGCCACCTGTCGGCAGGCATGCCGAGGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450849.7
3UTR-3UTR CCA 90 bp AAGAACCCGCTGGTCCAAGCTTTGAATGCAGGTGGCTGCGGCCAGCGCACTGGACAGACCCAGCCGGGGTaGCGGTGGGTGTCTGTGGCT +
Preference number: 2 (lower is better)
Translates to: KNPLVQALNAGGCGQRTGQTQPG*RWVSVA
Trigger: AGCCACAGACACCCACCGCCACCCCGGCTGGGTCTG...TCCAGTGCGCTGGCCGCAGCCACCTGCATTCAAAGCTTGGACCAGCGGGTTCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
3UTR-3UTR TCA 90 bp CCGAACAAGAACCCGCTGGTCCAAGCTTTGAATGCAGGTGGCTGCGGCCAGCGCCTTGGTGGGAGGTATTaGCGGGGTTTGCCCGGTGGC +
Preference number: 2 (lower is better)
Translates to: PNKNPLVQALNAGGCGQRLGGRY*RGLPGG
Trigger: GCCACCGGGCAAACCCCGTCAATACCTCCCACCAAG...GCGCTGGCCGCAGCCACCTGCATTCAAAGCTTGGACCAGCGGGTTCTTGTTCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
3UTR-3UTR CCA 90 bp GATCCGCGCTGTCCCCGGGCATGTTCTTGGCGGTGGCCACGGGGGTGTCGTCTTGAGATCTGGGGCCAGTaGGCGTCTGACAGAGGTTTT +
Preference number: 2 (lower is better)
Translates to: DPRCPRACSWRWPRGCRLEIWGQ*ASDRGF
Trigger: AAAACCTCTGTCAGACGCCCACTGGCCCCAGATCTC...AAGACGACACCCCCGTGGCCACCGCCAAGAACATGCCCGGGGACAGCGCGGATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000597739.1
3UTR-3UTR CCA 90 bp TTGGCGGCGCTGCCGTCCTCCGTCGTGCCGTCCCCAAATAGATCCGCGCTGTCCAGGGGCTGGCACCCTTaGAAGATTGGGACTCAGGAT +
Preference number: 2 (lower is better)
Translates to: LAALPSSVVPSPNRSALSRGWHP*KIGTQD
Trigger: ATCCTGAGTCCCAATCTTCCAAGGGTGCCAGCCCCT...GGACAGCGCGGATCTATTTGGGGACGGCACGACGGAGGACGGCAGCGCCGCCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597739.1
3UTR-3UTR TCA 90 bp TTCGCCTGCCTGTTGTCTGTGACTGCTGGTGATCCAAAGGGGCGTGGGTGGGCCGGGCCAGTGGGCGTCTaGCAGAGGTTTTCTGGCATC +
Preference number: 2 (lower is better)
Translates to: FACLLSVTAGDPKGRGWAGPVGV*QRFSGI
Trigger: GATGCCAGAAAACCTCTGTCAGACGCCCACTGGCCC...GGCCCACCCACGCCCCTTTGGATCACCAGCAGTCACAGACAACAGGCAGGCGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450849.7
3UTR-3UTR TCA 90 bp ATGCTGAGACCCAGAGGTGTCCCGTCACAGCCGGTGGCTCCACAGGAACCTGCAAGCTGGGTGTCATTATaGGCGAGAAGGGGGCGGGTC +
Preference number: 2 (lower is better)
Translates to: MLRPRGVPSQPVAPQEPASWVSL*ARRGRV
Trigger: GACCCGCCCCCTTCTCGCTCATAATGACACCCAGCT...TGCAGGTTCCTGTGGAGCCACCGGCTGTGACGGGACACCTCTGGGTCTCAGCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000450849.7
3UTR-3UTR CCA 90 bp CTGACGCTGGGTTGGGGGAGCAGTGAGGTCCACATATCTCATTCCTTGGTGGGACAGCCGGGGTGGCGGTaGGTGTCTGTGGCTCCAACC +
Preference number: 2 (lower is better)
Translates to: LTLGWGSSEVHISHSLVGQPGWR*VSVAPT
Trigger: GGTTGGAGCCACAGACACCCACCGCCACCCCGGCTG...TCCCACCAAGGAATGAGATATGTGGACCTCACTGCTCCCCCAACCCAGCGTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
3UTR CAA 90 bp CCTGCTCAGAAACCCCGTCTTCCTCATGGCAGGAGCTGCTGGCTTTaGGGGATGGGACTCGCGCAGGACCCTGTCCCACAGGGCAAATCT +
Preference number: 2 (lower is better)
Translates to: PAQKPRLPHGRSCWL*GMGLAQDPVPQGKS
Trigger: AGATTTGCCCTGTGGGACAGGGTCCTGCGCGAGTCCCATCCCCAAAAGCCAGCAGCTCCTGCCATGAGGAAGACGGGGTTTCTGAGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450849.7
3UTR-3UTR TCA 90 bp AAGAACCCGCTGGTCCAAGCTTTGAATGCAGGTGGCTGCGGCCAGCGCACTGGATCGGCTGAGAGTTCGTaGGTGTGGAAGGGTGAGGGG +
Preference number: 2 (lower is better)
Translates to: KNPLVQALNAGGCGQRTGSAESS*VWKGEG
Trigger: CCCCTCACCCTTCCACACTCACGAACTCTCAGCCGA...TCCAGTGCGCTGGCCGCAGCCACCTGCATTCAAAGCTTGGACCAGCGGGTTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
3UTR-3UTR TCA 90 bp GATCCGCGCTGTCCCCGGGCATGTTCTTGGCGGTGGCCACGGGGGTGTCGTCTTAGGGACCCCTCACTCTaGTCCAGAGAAATGTTGATC +
Preference number: 2 (lower is better)
Translates to: DPRCPRACSWRWPRGCRLRDPSL*SREMLI
Trigger: GATCAACATTTCTCTGGATCAGAGTGAGGGGTCCCT...AAGACGACACCCCCGTGGCCACCGCCAAGAACATGCCCGGGGACAGCGCGGATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000597739.1
3UTR-3UTR GCA 90 bp TTCGCCTGCCTGTTGTCTGTGACTGCTGGTGATCCAAAGGGGCGTGGGTGGGCCAGGCGTGAGCCATCGTaGCTGGCCCAGCCTTTTCTT +
Preference number: 2 (lower is better)
Translates to: FACLLSVTAGDPKGRGWARREPS*LAQPFL
Trigger: AAGAAAAGGCTGGGCCAGGCACGATGGCTCACGCCT...GGCCCACCCACGCCCCTTTGGATCACCAGCAGTCACAGACAACAGGCAGGCGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450849.7
3UTR-3UTR CCA 90 bp TTCGCCTGCCTGTTGTCTGTGACTGCTGGTGATCCAAAGGGGCGTGGGTGGGCCGATGAACGGAGGGGCTaGCACCCTTGGAAGATTGGG +
Preference number: 2 (lower is better)
Translates to: FACLLSVTAGDPKGRGWADERRG*HPWKIG
Trigger: CCCAATCTTCCAAGGGTGCCAGCCCCTCCGTTCATC...GGCCCACCCACGCCCCTTTGGATCACCAGCAGTCACAGACAACAGGCAGGCGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450849.7
3UTR-3UTR CCA 90 bp CGAGAGATGGCCAGCACAGTCCGAATGAACCACGAGGGGTGGACGATGATCAAGTCCTCCGCCGGGGCGTaGCACCGTTCAGGTACACGA +
Preference number: 2 (lower is better)
Translates to: REMASTVRMNHEGWTMIKSSAGA*HRSGTR
Trigger: TCGTGTACCTGAACGGTGCCACGCCCCGGCGGAGGA...CTTGATCATCGTCCACCCCTCGTGGTTCATTCGGACTGTGCTGGCCATCTCTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597739.1
3UTR CAA 90 bp TGCTGGGTTTCAGAGATGAACGGAGGGGCTGGCACCCTTGGAAGATaGGGACTCAGGATGAGGCAGGATGAGATCTGGGGCCAGTGGGCG +
Preference number: 2 (lower is better)
Translates to: CWVSEMNGGAGTLGR*GLRMRQDEIWGQWA
Trigger: CGCCCACTGGCCCCAGATCTCATCCTGCCTCATCCTGAGTCCCAATCTTCCAAGGGTGCCAGCCCCTCCGTTCATCTCTGAAACCCAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000450849.7
ENST00000597739.1
ENST00000600960.1
3UTR CAA 90 bp CACTTTCATGTAAGGCCGGATCATGTGCAGGTCTATACGGTGCTCTaGCTCCCCGATGATCACTGTCCGCCACAGGCGCCCGTTGGCGGC +
Preference number: 2 (lower is better)
Translates to: HFHVRPDHVQVYTVL*LPDDHCPPQAPVGG
Trigger: GCCGCCAACGGGCGCCTGTGGCGGACAGTGATCATCGGGGAGCAAGAGCACCGTATAGACCTGCACATGATCCGGCCTTACATGAAAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597739.1
3UTR-3UTR TCA 90 bp TTCCACTGGTGCCACCTCTGGCTTCTCTTCAGACCTGGGCAGCACAAACTCCGGTCGGCTGAGAGTTCGTaGGTGTGGAAGGGTGAGGGG +
Preference number: 2 (lower is better)
Translates to: FHWCHLWLLFRPGQHKLRSAESS*VWKGEG
Trigger: CCCCTCACCCTTCCACACTCACGAACTCTCAGCCGA...CCGGAGTTTGTGCTGCCCAGGTCTGAAGAGAAGCCAGAGGTGGCACCAGTGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597739.1
3UTR-3UTR TCA 90 bp GTCTTCCTCATGGCAGGAGCTGCTGGCTTTTGGGGATGGGACTCGCGCAGGACCCTTGCCTTCCTCGGCTaGGAGTTCGTGAGTGTGGAA +
Preference number: 2 (lower is better)
Translates to: VFLMAGAAGFWGWDSRRTLAFLG*EFVSVE
Trigger: TTCCACACTCACGAACTCTCAGCCGAGGAAGGCAAG...GGTCCTGCGCGAGTCCCATCCCCAAAAGCCAGCAGCTCCTGCCATGAGGAAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450849.7
3UTR-3UTR GCA 90 bp CTGACGCTGGGTTGGGGGAGCAGTGAGGTCCACATATCTCATTCCTTGGTGGGATCTGACCACAGAGGCTaGGAGCAGGAGCGGAGGCCA +
Preference number: 2 (lower is better)
Translates to: LTLGWGSSEVHISHSLVGSDHRG*EQERRP
Trigger: TGGCCTCCGCTCCTGCTCGCAGCCTCTGTGGTCAGA...TCCCACCAAGGAATGAGATATGTGGACCTCACTGCTCCCCCAACCCAGCGTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
3UTR-3UTR CCA 90 bp TGGGGGAGCAGTGAGGTCCACATATCTCATTCCTTGGTGGGAGGTATTGACGGGGGCGGTGGGTGTCTGTaGCTCCAACCTGGAGCGGGT +
Preference number: 2 (lower is better)
Translates to: WGSSEVHISHSLVGGIDGGGGCL*LQPGAG
Trigger: ACCCGCTCCAGGTTGGAGCCACAGACACCCACCGCC...CCCGTCAATACCTCCCACCAAGGAATGAGATATGTGGACCTCACTGCTCCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
3UTR-3UTR CCA 90 bp TTCGCCTGCCTGTTGTCTGTGACTGCTGGTGATCCAAAGGGGCGTGGGTGGGCCGCAGTGGCACGATCTTaGCTCACTGTAACCTCTGCC +
Preference number: 2 (lower is better)
Translates to: FACLLSVTAGDPKGRGWAAVARS*LTVTSA
Trigger: GGCAGAGGTTACAGTGAGCCAAGATCGTGCCACTGC...GGCCCACCCACGCCCCTTTGGATCACCAGCAGTCACAGACAACAGGCAGGCGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450849.7
3UTR-3UTR CCA 90 bp TCGTATTGCAGGACGCAGTCTGGGATCTGGACGTGTTCCATAGGGATGAGTTGCCCCCGGGCATGTTCTTaGCGGTGGCCACGGGGGTGT +
Preference number: 2 (lower is better)
Translates to: SYCRTQSGIWTCSIGMSCPRACS*RWPRGC
Trigger: ACACCCCCGTGGCCACCGCCAAGAACATGCCCGGGG...GCAACTCATCCCTATGGAACACGTCCAGATCCCAGACTGCGTCCTGCAATACGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000597739.1
3UTR-3UTR TCA 90 bp CGAGAGATGGCCAGCACAGTCCGAATGAACCACGAGGGGTGGACGATGATCAAGGGGCCAGTGGGCGTCTaGCAGAGGTTTTCTGGCATC +
Preference number: 2 (lower is better)
Translates to: REMASTVRMNHEGWTMIKGPVGV*QRFSGI
Trigger: GATGCCAGAAAACCTCTGTCAGACGCCCACTGGCCC...CTTGATCATCGTCCACCCCTCGTGGTTCATTCGGACTGTGCTGGCCATCTCTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000597739.1
3UTR-3UTR TCA 90 bp AAGAACCCGCTGGTCCAAGCTTTGAATGCAGGTGGCTGCGGCCAGCGCACTGGAGATTGGGACTCAGGATaGGGCAGGATGAGATCTGGG +
Preference number: 2 (lower is better)
Translates to: KNPLVQALNAGGCGQRTGDWDSG*GRMRSG
Trigger: CCCAGATCTCATCCTGCCTCATCCTGAGTCCCAATC...TCCAGTGCGCTGGCCGCAGCCACCTGCATTCAAAGCTTGGACCAGCGGGTTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
3UTR-3UTR TCA 90 bp AAGCAGCTGAAAAGGATGCTGGGTTTCAGAGATGAACGGAGGGGCTGGCACCCTGCTGGGTTTCAGAGATaGACGGAGGGGCTGGCACCC +
Preference number: 2 (lower is better)
Translates to: KQLKRMLGFRDERRGWHPAGFQR*TEGLAP
Trigger: GGGTGCCAGCCCCTCCGTTCATCTCTGAAACCCAGC...AGGGTGCCAGCCCCTCCGTTCATCTCTGAAACCCAGCATCCTTTTCAGCTGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000450849.7
ENST00000597739.1
ENST00000600960.1
3UTR-3UTR TCA 90 bp GATGAGATCTGGGGCCAGTGGGCGTCTGACAGAGGTTTTCTGGCATCTGGAATCGCTGGGTTTCAGAGATaGACGGAGGGGCTGGCACCC +
Preference number: 2 (lower is better)
Translates to: DEIWGQWASDRGFLASGIAGFQR*TEGLAP
Trigger: GGGTGCCAGCCCCTCCGTTCATCTCTGAAACCCAGC...GATTCCAGATGCCAGAAAACCTCTGTCAGACGCCCACTGGCCCCAGATCTCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000450849.7
ENST00000597739.1
ENST00000600960.1
3UTR-3UTR TCA 90 bp GATGATCACTGTCCGCCACAGGCGCCCGTTGGCGGCGCTGCCGTCCTCCGTCGTATGTTTTCAAGCAGCTaGAAAGGATGCTGGGTTTCA +
Preference number: 2 (lower is better)
Translates to: DDHCPPQAPVGGAAVLRRMFSSS*KGCWVS
Trigger: TGAAACCCAGCATCCTTTTCAGCTGCTTGAAAACAT...ACGACGGAGGACGGCAGCGCCGCCAACGGGCGCCTGTGGCGGACAGTGATCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597739.1
3UTR-3UTR TCA 90 bp ACTGGTGCCACCTCTGGCTTCTCTTCAGACCTGGGCAGCACAAACTCCGGCTGGAGTACCCTCCGTGGGTaGCCACTTTCATGTAAGGCC +
Preference number: 2 (lower is better)
Translates to: TGATSGFSSDLGSTNSGWSTLRG*PLSCKA
Trigger: GGCCTTACATGAAAGTGGTCACCCACGGAGGGTACT...CCAGCCGGAGTTTGTGCTGCCCAGGTCTGAAGAGAAGCCAGAGGTGGCACCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597739.1
3UTR-3UTR TCA 90 bp TCGTATTGCAGGACGCAGTCTGGGATCTGGACGTGTTCCATAGGGATGAGTTGCCAGGATGAGGCAGGATaGGATCTGGGGCCAGTGGGC +
Preference number: 2 (lower is better)
Translates to: SYCRTQSGIWTCSIGMSCQDEAG*DLGPVG
Trigger: GCCCACTGGCCCCAGATCTCATCCTGCCTCATCCTG...GCAACTCATCCCTATGGAACACGTCCAGATCCCAGACTGCGTCCTGCAATACGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597739.1
3UTR-3UTR TCA 90 bp AAGAACCCGCTGGTCCAAGCTTTGAATGCAGGTGGCTGCGGCCAGCGCACTGGATTCAGAGCCAGTTTCTaGGCCTCTGCTGTTCCAACC +
Preference number: 2 (lower is better)
Translates to: KNPLVQALNAGGCGQRTGFRASF*ASAVPT
Trigger: GGTTGGAACAGCAGAGGCTCAGAAACTGGCTCTGAA...TCCAGTGCGCTGGCCGCAGCCACCTGCATTCAAAGCTTGGACCAGCGGGTTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
3UTR-3UTR CCA 90 bp CGGTTAAGGCCCAGCAGTTCTTGTCACTGTTGGGTTAGAACGATTCATGCTGGACAGACCCAGCCGGGGTaGCGGTGGGTGTCTGTGGCT +
Preference number: 2 (lower is better)
Translates to: RLRPSSSCHCWVRTIHAGQTQPG*RWVSVA
Trigger: AGCCACAGACACCCACCGCCACCCCGGCTGGGTCTG...TCCAGCATGAATCGTTCTAACCCAACAGTGACAAGAACTGCTGGGCCTTAACCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450849.7
3UTR CAA 90 bp GTCTGTGGCTCCAACCTGGAGCGGGTGACAAGCAAGAGAAGGGTCTaGAATCTTGTATCCAGCTCTGACCACAGAGGCTGCGAGCAGGAG +
Preference number: 2 (lower is better)
Translates to: VCGSNLERVTSKRRV*NLVSSSDHRGCEQE
Trigger: CTCCTGCTCGCAGCCTCTGTGGTCAGAGCTGGATACAAGATTCAAGACCCTTCTCTTGCTTGTCACCCGCTCCAGGTTGGAGCCACAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
3UTR CAA 90 bp CCTAGGGAAATTTGCCTCCCGAACAAGAACCCGCTGGTCCAAGCTTaGAATGCAGGTGGCTGCGGCCAGCGCACTGGATTTATCTTCCCG +
Preference number: 2 (lower is better)
Translates to: PREICLPNKNPLVQA*NAGGCGQRTGFIFP
Trigger: CGGGAAGATAAATCCAGTGCGCTGGCCGCAGCCACCTGCATTCAAAGCTTGGACCAGCGGGTTCTTGTTCGGGAGGCAAATTTCCCTAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
3UTR-3UTR TCA 90 bp CTTCTGGGTCAGGTAGGGCCTCACTTGTCACTTGATTGCTGCTGTAGACACTCACAGGATGAGGCAGGATaGGATCTGGGGCCAGTGGGC +
Preference number: 2 (lower is better)
Translates to: LLGQVGPHLSLDCCCRHSQDEAG*DLGPVG
Trigger: GCCCACTGGCCCCAGATCTCATCCTGCCTCATCCTG...TGAGTGTCTACAGCAGCAATCAAGTGACAAGTGAGGCCCTACCTGACCCAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450849.7
3UTR-3UTR TCA 90 bp CGAGAGATGGCCAGCACAGTCCGAATGAACCACGAGGGGTGGACGATGATCAAGTCTTGTATCCAGCTCTaGCCACAGAGGCTGCGAGCA +
Preference number: 2 (lower is better)
Translates to: REMASTVRMNHEGWTMIKSCIQL*PQRLRA
Trigger: TGCTCGCAGCCTCTGTGGTCAGAGCTGGATACAAGA...CTTGATCATCGTCCACCCCTCGTGGTTCATTCGGACTGTGCTGGCCATCTCTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597739.1
3UTR-3UTR TCA 90 bp CTGACGCTGGGTTGGGGGAGCAGTGAGGTCCACATATCTCATTCCTTGGTGGGAGGGTTGGGGGAGCAGTaGGGTCCACATATCTCATTC +
Preference number: 2 (lower is better)
Translates to: LTLGWGSSEVHISHSLVGGLGEQ*GPHISF
Trigger: GAATGAGATATGTGGACCTCACTGCTCCCCCAACCC...TCCCACCAAGGAATGAGATATGTGGACCTCACTGCTCCCCCAACCCAGCGTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
3UTR-3UTR TCA 90 bp GGATGCTGGGTTTCAGAGATGAACGGAGGGGCTGGCACCCTTGGAAGATTGGGAGATCCAGAGAAATGTTaGTCTCTGGGGCCACCAGCG +
Preference number: 2 (lower is better)
Translates to: GCWVSEMNGGAGTLGRLGDPEKC*SLGPPA
Trigger: CGCTGGTGGCCCCAGAGATCAACATTTCTCTGGATC...TCCCAATCTTCCAAGGGTGCCAGCCCCTCCGTTCATCTCTGAAACCCAGCATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597739.1
3UTR-3UTR TCA 90 bp ACTGGTGCCACCTCTGGCTTCTCTTCAGACCTGGGCAGCACAAACTCCGGCTGGACGAGGGGTGGACGATaGTCAAGGACTTCAGGTTTT +
Preference number: 2 (lower is better)
Translates to: TGATSGFSSDLGSTNSGWTRGGR*SRTSGF
Trigger: AAAACCTGAAGTCCTTGATCATCGTCCACCCCTCGT...CCAGCCGGAGTTTGTGCTGCCCAGGTCTGAAGAGAAGCCAGAGGTGGCACCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597739.1
3UTR-3UTR GCA 90 bp GGTGGGGGCAGAATGTTTAGCCGGCAGGCACCTTCTGGGTCAGGTAGGGCCTCAACTGGGGTGTCATTTTaGAATCGGAGGACAAGGATG +
Preference number: 2 (lower is better)
Translates to: GGGRMFSRQAPSGSGRASTGVSF*NRRTRM
Trigger: CATCCTTGTCCTCCGATTGCAAAATGACACCCCAGT...TGAGGCCCTACCTGACCCAGAAGGTGCCTGCCGGCTAAACATTCTGCCCCCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000450849.7
3UTR-3UTR GCA 90 bp GTCCGATTGGGTGGAATGAGTTCTTTCCTGTCCCCGTCTCCTGTCTGTGACTTGAGGGCCTGGAGAATGTaGCCGCCCTACTCACCGTCT +
Preference number: 2 (lower is better)
Translates to: VRLGGMSSFLSPSPVCDLRAWRM*PPYSPS
Trigger: AGACGGTGAGTAGGGCGGGCACATTCTCCAGGCCCT...CAAGTCACAGACAGGAGACGGGGACAGGAAAGAACTCATTCCACCCAATCGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450849.7
3UTR-3UTR CCA 90 bp AAGCAGCTGAAAAGGATGCTGGGTTTCAGAGATGAACGGAGGGGCTGGCACCCTGATGAACGGAGGGGCTaGCACCCTTGGAAGATTGGG +
Preference number: 2 (lower is better)
Translates to: KQLKRMLGFRDERRGWHPDERRG*HPWKIG
Trigger: CCCAATCTTCCAAGGGTGCCAGCCCCTCCGTTCATC...AGGGTGCCAGCCCCTCCGTTCATCTCTGAAACCCAGCATCCTTTTCAGCTGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000450849.7
ENST00000597739.1
ENST00000600960.1
3UTR-3UTR CCA 90 bp GTCTTCCTCATGGCAGGAGCTGCTGGCTTTTGGGGATGGGACTCGCGCAGGACCAGCTGGGCCCTTTTCTaGAACGCACAAATACTGCAT +
Preference number: 2 (lower is better)
Translates to: VFLMAGAAGFWGWDSRRTSWALF*NAQILH
Trigger: ATGCAGTATTTGTGCGTTCCAGAAAAGGGCCCAGCT...GGTCCTGCGCGAGTCCCATCCCCAAAAGCCAGCAGCTCCTGCCATGAGGAAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000450849.7
3UTR-3UTR CCA 90 bp TTCGCCTGCCTGTTGTCTGTGACTGCTGGTGATCCAAAGGGGCGTGGGTGGGCCGCTCTTCTTGTGCAATaGGCTCTGATCCTCTCAAAG +
Preference number: 2 (lower is better)
Translates to: FACLLSVTAGDPKGRGWAALLVQ*ALILSK
Trigger: CTTTGAGAGGATCAGAGCCCATTGCACAAGAAGAGC...GGCCCACCCACGCCCCTTTGGATCACCAGCAGTCACAGACAACAGGCAGGCGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450849.7
3UTR-3UTR CCA 90 bp TTCGCCTGCCTGTTGTCTGTGACTGCTGGTGATCCAAAGGGGCGTGGGTGGGCCGAGGTTTCACCATGTTaGCCAGGCTGTTCTCAAACT +
Preference number: 2 (lower is better)
Translates to: FACLLSVTAGDPKGRGWAEVSPC*PGCSQT
Trigger: AGTTTGAGAACAGCCTGGCCAACATGGTGAAACCTC...GGCCCACCCACGCCCCTTTGGATCACCAGCAGTCACAGACAACAGGCAGGCGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450849.7
3UTR-3UTR CCA 90 bp CTGATACAAATCCATCTCAAAGCCCATCTGTGGACGGTGCAGGTCGTGGCCCAGCTAGGAAGAAGGGCCTaGAGAATGTGCCCGCCCTAC +
Preference number: 2 (lower is better)
Translates to: LIQIHLKAHLWTVQVVAQLGRRA*RMCPPY
Trigger: GTAGGGCGGGCACATTCTCCAGGCCCTTCTTCCTAG...CTGGGCCACGACCTGCACCGTCCACAGATGGGCTTTGAGATGGATTTGTATCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450849.7
3UTR-3UTR TCA 90 bp GTGACAAGCAAGAGAAGGGTCTTGAATCTTGTATCCAGCTCTGACCACAGAGGCGCTGGGTTTCAGAGATaGACGGAGGGGCTGGCACCC +
Preference number: 2 (lower is better)
Translates to: VTSKRRVLNLVSSSDHRGAGFQR*TEGLAP
Trigger: GGGTGCCAGCCCCTCCGTTCATCTCTGAAACCCAGC...GCCTCTGTGGTCAGAGCTGGATACAAGATTCAAGACCCTTCTCTTGCTTGTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000450849.7
ENST00000597739.1
ENST00000600960.1
3UTR-3UTR TCA 90 bp GATGAGATCTGGGGCCAGTGGGCGTCTGACAGAGGTTTTCTGGCATCTGGAATCCTTGCCTTCCTCGGCTaGGAGTTCGTGAGTGTGGAA +
Preference number: 2 (lower is better)
Translates to: DEIWGQWASDRGFLASGILAFLG*EFVSVE
Trigger: TTCCACACTCACGAACTCTCAGCCGAGGAAGGCAAG...GATTCCAGATGCCAGAAAACCTCTGTCAGACGCCCACTGGCCCCAGATCTCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000450849.7
ENST00000597739.1
ENST00000600960.1
3UTR-3UTR TCA 90 bp TGGGGGAGCAGTGAGGTCCACATATCTCATTCCTTGGTGGGAGGTATTGACGGGCTTGCCTTCCTCGGCTaGGAGTTCGTGAGTGTGGAA +
Preference number: 2 (lower is better)
Translates to: WGSSEVHISHSLVGGIDGLAFLG*EFVSVE
Trigger: TTCCACACTCACGAACTCTCAGCCGAGGAAGGCAAG...CCCGTCAATACCTCCCACCAAGGAATGAGATATGTGGACCTCACTGCTCCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
3UTR-3UTR GCA 90 bp GATGAGATCTGGGGCCAGTGGGCGTCTGACAGAGGTTTTCTGGCATCTGGAATCTTGAATGCAGGTGGCTaGGGCCAGCGCACTGGATTT +
Preference number: 2 (lower is better)
Translates to: DEIWGQWASDRGFLASGILNAGG*GQRTGF
Trigger: AAATCCAGTGCGCTGGCCGCAGCCACCTGCATTCAA...GATTCCAGATGCCAGAAAACCTCTGTCAGACGCCCACTGGCCCCAGATCTCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
3UTR-3UTR GCA 90 bp TTCCACTGGTGCCACCTCTGGCTTCTCTTCAGACCTGGGCAGCACAAACTCCGGCCATGTCCTTTGTTATaGTCACGTCGCCTCAGGACA +
Preference number: 2 (lower is better)
Translates to: FHWCHLWLLFRPGQHKLRPCPLL*SRRLRT
Trigger: TGTCCTGAGGCGACGTGAGCATAACAAAGGACATGG...CCGGAGTTTGTGCTGCCCAGGTCTGAAGAGAAGCCAGAGGTGGCACCAGTGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597739.1
3UTR-3UTR CCA 90 bp TCGTATTGCAGGACGCAGTCTGGGATCTGGACGTGTTCCATAGGGATGAGTTGCGATGAACGGAGGGGCTaGCACCCTTGGAAGATTGGG +
Preference number: 2 (lower is better)
Translates to: SYCRTQSGIWTCSIGMSCDERRG*HPWKIG
Trigger: CCCAATCTTCCAAGGGTGCCAGCCCCTCCGTTCATC...GCAACTCATCCCTATGGAACACGTCCAGATCCCAGACTGCGTCCTGCAATACGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597739.1
3UTR-3UTR TCA 90 bp TCCTCTTCGTATTGCAGGACGCAGTCTGGGATCTGGACGTGTTCCATAGGGATGGATTGGGACTCAGGATaGGGCAGGATGAGATCTGGG +
Preference number: 2 (lower is better)
Translates to: SSSYCRTQSGIWTCSIGMDWDSG*GRMRSG
Trigger: CCCAGATCTCATCCTGCCTCATCCTGAGTCCCAATC...CATCCCTATGGAACACGTCCAGATCCCAGACTGCGTCCTGCAATACGAAGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597739.1
3UTR-3UTR TCA 90 bp CTGATACAAATCCATCTCAAAGCCCATCTGTGGACGGTGCAGGTCGTGGCCCAGTTGTGCAATGGGCTCTaGTCCTCTCAAAGGAGCTGG +
Preference number: 2 (lower is better)
Translates to: LIQIHLKAHLWTVQVVAQLCNGL*SSQRSW
Trigger: CCAGCTCCTTTGAGAGGATCAGAGCCCATTGCACAA...CTGGGCCACGACCTGCACCGTCCACAGATGGGCTTTGAGATGGATTTGTATCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450849.7
3UTR-3UTR GCA 90 bp GCCAGCGCACTGGATTTATCTTCCCGAATGACTTCTGAAACACTCAAACGCCCGACCCCCTGCGCTTCTTaGCTTCCTCGGCTGAGAGTT +
Preference number: 2 (lower is better)
Translates to: ASALDLSSRMTSETLKRPTPCAS*LPRLRV
Trigger: AACTCTCAGCCGAGGAAGGCAAGAAGCGCAGGGGGT...CGGGCGTTTGAGTGTTTCAGAAGTCATTCGGGAAGATAAATCCAGTGCGCTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
3UTR-3UTR GCA 90 bp CTGATACAAATCCATCTCAAAGCCCATCTGTGGACGGTGCAGGTCGTGGCCCAGCAGTTTCTGAGCCTCTaGTGTTCCAACCCGGAACAG +
Preference number: 2 (lower is better)
Translates to: LIQIHLKAHLWTVQVVAQQFLSL*CSNPEQ
Trigger: CTGTTCCGGGTTGGAACAGCAGAGGCTCAGAAACTG...CTGGGCCACGACCTGCACCGTCCACAGATGGGCTTTGAGATGGATTTGTATCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450849.7
3UTR-3UTR GCA 90 bp ACCCAGCCACTTTTGTCATCTTGTGTTGGCTTTGGCAGCGACACCATTCACTGGGGCTCCACAGGAACCTaGAGGCATAAGCCTGCTCAG +
Preference number: 2 (lower is better)
Translates to: TQPLLSSCVGFGSDTIHWGSTGT*RHKPAQ
Trigger: CTGAGCAGGCTTATGCCTGCAGGTTCCTGTGGAGCC...CCAGTGAATGGTGTCGCTGCCAAAGCCAACACAAGATGACAAAAGTGGCTGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450849.7
3UTR-3UTR CCA 90 bp GTCTTCCTCATGGCAGGAGCTGCTGGCTTTTGGGGATGGGACTCGCGCAGGACCCCAGTGATCCGCATTTaGACCACATTAGAAAAGTCT +
Preference number: 2 (lower is better)
Translates to: VFLMAGAAGFWGWDSRRTPVIRI*TTLEKS
Trigger: AGACTTTTCTAATGTGGTCCAAATGCGGATCACTGG...GGTCCTGCGCGAGTCCCATCCCCAAAAGCCAGCAGCTCCTGCCATGAGGAAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000450849.7
3UTR-3UTR TCA 90 bp GGATGCTGGGTTTCAGAGATGAACGGAGGGGCTGGCACCCTTGGAAGATTGGGAGCAAGAGAAGGGTCTTaGATCTTGTATCCAGCTCTG +
Preference number: 2 (lower is better)
Translates to: GCWVSEMNGGAGTLGRLGAREGS*ILYPAL
Trigger: CAGAGCTGGATACAAGATTCAAGACCCTTCTCTTGC...TCCCAATCTTCCAAGGGTGCCAGCCCCTCCGTTCATCTCTGAAACCCAGCATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000450849.7
ENST00000597739.1
ENST00000600960.1
3UTR-3UTR TCA 90 bp GCAGTTCTTGTCACTGTTGGGTTAGAACGATTCATGCTGGAGCTGCGTGCCTTTCCAACCTGGAGCGGGTaGCAAGCAAGAGAAGGGTCT +
Preference number: 2 (lower is better)
Translates to: AVLVTVGLERFMLELRAFPTWSG*QAREGS
Trigger: AGACCCTTCTCTTGCTTGTCACCCGCTCCAGGTTGG...AAAGGCACGCAGCTCCAGCATGAATCGTTCTAACCCAACAGTGACAAGAACTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450849.7
3UTR-3UTR TCA 90 bp ACAAGCAAGAGAAGGGTCTTGAATCTTGTATCCAGCTCTGACCACAGAGGCTGCCCAACCTGGAGCGGGTaGCAAGCAAGAGAAGGGTCT +
Preference number: 2 (lower is better)
Translates to: TSKRRVLNLVSSSDHRGCPTWSG*QAREGS
Trigger: AGACCCTTCTCTTGCTTGTCACCCGCTCCAGGTTGG...GCAGCCTCTGTGGTCAGAGCTGGATACAAGATTCAAGACCCTTCTCTTGCTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000450849.7
ENST00000597739.1
ENST00000600960.1
3UTR-3UTR GCA 90 bp ACCAGTGATCCGCATTTGGACCACATTAGAAAAGTCTGTCTTCTTTTTCCTAGGACGCGGGCCACCCCCTaGGCTTCTTGCCTTCCTCGG +
Preference number: 2 (lower is better)
Translates to: TSDPHLDHIRKVCLLFPRTRATP*ASCLPR
Trigger: CCGAGGAAGGCAAGAAGCGCAGGGGGTGGCCCGCGT...CCTAGGAAAAAGAAGACAGACTTTTCTAATGTGGTCCAAATGCGGATCACTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
3UTR-3UTR GCA 90 bp GATGAGATCTGGGGCCAGTGGGCGTCTGACAGAGGTTTTCTGGCATCTGGAATCCCATGTCCTTTGTTATaGTCACGTCGCCTCAGGACA +
Preference number: 2 (lower is better)
Translates to: DEIWGQWASDRGFLASGIPCPLL*SRRLRT
Trigger: TGTCCTGAGGCGACGTGAGCATAACAAAGGACATGG...GATTCCAGATGCCAGAAAACCTCTGTCAGACGCCCACTGGCCCCAGATCTCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000597739.1
ENST00000600960.1
3UTR-3UTR CCA 90 bp CTGGGTGTCATTATGAGCGAGAAGGGGGCGGGTCAAATGAAAAACCATGGGTGTAGGGGCTGGCACCCTTaGAAGATTGGGACTCAGGAT +
Preference number: 2 (lower is better)
Translates to: LGVIMSEKGAGQMKNHGCRGWHP*KIGTQD
Trigger: ATCCTGAGTCCCAATCTTCCAAGGGTGCCAGCCCCT...ACACCCATGGTTTTTCATTTGACCCGCCCCCTTCTCGCTCATAATGACACCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
3UTR-3UTR CCA 90 bp ACCAGTGATCCGCATTTGGACCACATTAGAAAAGTCTGTCTTCTTTTTCCTAGGCAGCCGGGGTGGCGGTaGGTGTCTGTGGCTCCAACC +
Preference number: 2 (lower is better)
Translates to: TSDPHLDHIRKVCLLFPRQPGWR*VSVAPT
Trigger: GGTTGGAGCCACAGACACCCACCGCCACCCCGGCTG...CCTAGGAAAAAGAAGACAGACTTTTCTAATGTGGTCCAAATGCGGATCACTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
3UTR-3UTR CCA 90 bp CTGACGCTGGGTTGGGGGAGCAGTGAGGTCCACATATCTCATTCCTTGGTGGGAACATATCTCATTCCTTaGTGGGAGGTATTGACGGGG +
Preference number: 2 (lower is better)
Translates to: LTLGWGSSEVHISHSLVGTYLIP*WEVLTG
Trigger: CCCCGTCAATACCTCCCACCAAGGAATGAGATATGT...TCCCACCAAGGAATGAGATATGTGGACCTCACTGCTCCCCCAACCCAGCGTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
3UTR-3UTR CCA 90 bp GTCCGATTGGGTGGAATGAGTTCTTTCCTGTCCCCGTCTCCTGTCTGTGACTTGAATTGTGGGTCTGGTTaGCCCAGCCTGGATAGCACT +
Preference number: 2 (lower is better)
Translates to: VRLGGMSSFLSPSPVCDLNCGSG*PSLDST
Trigger: AGTGCTATCCAGGCTGGGCCAACCAGACCCACAATT...CAAGTCACAGACAGGAGACGGGGACAGGAAAGAACTCATTCCACCCAATCGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450849.7
3UTR-3UTR CCA 90 bp GATGAGTTGCTCCAGGTCTTCCAAGCTGTGCACGTACTGGATCTTGTTGATGAAGCATGTTCTTGGCGGTaGCCACGGGGGTGTCGTCTT +
Preference number: 2 (lower is better)
Translates to: DELLQVFQAVHVLDLVDEACSWR*PRGCRL
Trigger: AAGACGACACCCCCGTGGCCACCGCCAAGAACATGC...TTCATCAACAAGATCCAGTACGTGCACAGCTTGGAAGACCTGGAGCAACTCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597739.1
3UTR CAA 90 bp TTGGCAGCGACACCATTCACTGGGGTGGGAATTCGGGACAGGGTCTaGCCCCTGTGCCCGGGATTTGACATTTGGGAAACAAATGTTAAA +
Preference number: 2 (lower is better)
Translates to: LAATPFTGVGIRDRV*PLCPGFDIWETNVK
Trigger: TTTAACATTTGTTTCCCAAATGTCAAATCCCGGGCACAGGGGCAAGACCCTGTCCCGAATTCCCACCCCAGTGAATGGTGTCGCTGCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450849.7
3UTR CAA 90 bp TTGCAGGACGCAGTCTGGGATCTGGACGTGTTCCATAGGGATGAGTaGCTCCAGGTCTTCCAAGCTGTGCACGTACTGGATCTTGTTGAT +
Preference number: 2 (lower is better)
Translates to: LQDAVWDLDVFHRDE*LQVFQAVHVLDLVD
Trigger: ATCAACAAGATCCAGTACGTGCACAGCTTGGAAGACCTGGAGCAACTCATCCCTATGGAACACGTCCAGATCCCAGACTGCGTCCTGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597739.1
3UTR-3UTR TCA 90 bp GTGACAAGCAAGAGAAGGGTCTTGAATCTTGTATCCAGCTCTGACCACAGAGGCGATTGGGACTCAGGATaGGGCAGGATGAGATCTGGG +
Preference number: 2 (lower is better)
Translates to: VTSKRRVLNLVSSSDHRGDWDSG*GRMRSG
Trigger: CCCAGATCTCATCCTGCCTCATCCTGAGTCCCAATC...GCCTCTGTGGTCAGAGCTGGATACAAGATTCAAGACCCTTCTCTTGCTTGTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000450849.7
ENST00000597739.1
ENST00000600960.1
3UTR-3UTR TCA 90 bp GCAGTTCTTGTCACTGTTGGGTTAGAACGATTCATGCTGGAGCTGCGTGCCTTTTCTTGTATCCAGCTCTaGCCACAGAGGCTGCGAGCA +
Preference number: 2 (lower is better)
Translates to: AVLVTVGLERFMLELRAFSCIQL*PQRLRA
Trigger: TGCTCGCAGCCTCTGTGGTCAGAGCTGGATACAAGA...AAAGGCACGCAGCTCCAGCATGAATCGTTCTAACCCAACAGTGACAAGAACTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450849.7
3UTR-3UTR GCA 90 bp GCCAGCGCACTGGATTTATCTTCCCGAATGACTTCTGAAACACTCAAACGCCCGCAGTTTCTGAGCCTCTaGTGTTCCAACCCGGAACAG +
Preference number: 2 (lower is better)
Translates to: ASALDLSSRMTSETLKRPQFLSL*CSNPEQ
Trigger: CTGTTCCGGGTTGGAACAGCAGAGGCTCAGAAACTG...CGGGCGTTTGAGTGTTTCAGAAGTCATTCGGGAAGATAAATCCAGTGCGCTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
3UTR-3UTR GCA 90 bp TCCTCTTCGTATTGCAGGACGCAGTCTGGGATCTGGACGTGTTCCATAGGGATGTCTATACGGTGCTCTTaGTCCCCGATGATCACTGTC +
Preference number: 2 (lower is better)
Translates to: SSSYCRTQSGIWTCSIGMSIRCS*SPMITV
Trigger: GACAGTGATCATCGGGGAGCAAGAGCACCGTATAGA...CATCCCTATGGAACACGTCCAGATCCCAGACTGCGTCCTGCAATACGAAGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597739.1
3UTR-3UTR CCA 90 bp ACAAGCAAGAGAAGGGTCTTGAATCTTGTATCCAGCTCTGACCACAGAGGCTGCGAGATCTGGGGCCAGTaGGCGTCTGACAGAGGTTTT +
Preference number: 2 (lower is better)
Translates to: TSKRRVLNLVSSSDHRGCEIWGQ*ASDRGF
Trigger: AAAACCTCTGTCAGACGCCCACTGGCCCCAGATCTC...GCAGCCTCTGTGGTCAGAGCTGGATACAAGATTCAAGACCCTTCTCTTGCTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000450849.7
ENST00000597739.1
ENST00000600960.1
3UTR-3UTR CCA 90 bp ACCAGTGATCCGCATTTGGACCACATTAGAAAAGTCTGTCTTCTTTTTCCTAGGGGCGGTGGGTGTCTGTaGCTCCAACCTGGAGCGGGT +
Preference number: 2 (lower is better)
Translates to: TSDPHLDHIRKVCLLFPRGGGCL*LQPGAG
Trigger: ACCCGCTCCAGGTTGGAGCCACAGACACCCACCGCC...CCTAGGAAAAAGAAGACAGACTTTTCTAATGTGGTCCAAATGCGGATCACTGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
3UTR-3UTR CCA 90 bp CCGAACAAGAACCCGCTGGTCCAAGCTTTGAATGCAGGTGGCTGCGGCCAGCGCAATGTTCTAGATTACTaGGGTGTCATTTTGCAATCG +
Preference number: 2 (lower is better)
Translates to: PNKNPLVQALNAGGCGQRNVLDY*GVILQS
Trigger: CGATTGCAAAATGACACCCCAGTAATCTAGAACATT...GCGCTGGCCGCAGCCACCTGCATTCAAAGCTTGGACCAGCGGGTTCTTGTTCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
3UTR-3UTR CCA 90 bp ACCCTGATACAAATCCATCTCAAAGCCCATCTGTGGACGGTGCAGGTCGTGGCCGCAATCTCTGCCTCCTaGGTTCCAGCTATTCTTCTA +
Preference number: 2 (lower is better)
Translates to: TLIQIHLKAHLWTVQVVAAISAS*VPAILL
Trigger: TAGAAGAATAGCTGGAACCCAGGAGGCAGAGATTGC...GGCCACGACCTGCACCGTCCACAGATGGGCTTTGAGATGGATTTGTATCAGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450849.7
3UTR CAA 90 bp CCAGTTCCCTGCCATCATCGTTGGAATAACCCCAAATGCAATTCCTaGCTGTCTCAGGTCAAGATGCACTGGACGCTTTCACTGAGGCTC +
Preference number: 2 (lower is better)
Translates to: PVPCHHRWNNPKCNS*LSQVKMHWTLSLRL
Trigger: GAGCCTCAGTGAAAGCGTCCAGTGCATCTTGACCTGAGACAGCAAGGAATTGCATTTGGGGTTATTCCAACGATGATGGCAGGGAACTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450849.7
3UTR CAA 90 bp GAATGTTTAGCCGGCAGGCACCTTCTGGGTCAGGTAGGGCCTCACTaGTCACTTGATTGCTGCTGTAGACACTCAATTATTAGGTGTCCG +
Preference number: 2 (lower is better)
Translates to: ECLAGRHLLGQVGPH*SLDCCCRHSIIRCP
Trigger: CGGACACCTAATAATTGAGTGTCTACAGCAGCAATCAAGTGACAAGTGAGGCCCTACCTGACCCAGAAGGTGCCTGCCGGCTAAACATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450849.7
3UTR-3UTR TCA 90 bp GCCAGCGCACTGGATTTATCTTCCCGAATGACTTCTGAAACACTCAAACGCCCGAGGGGGCGGGTCAAATaGAAAACCATGGGTGTGAAA +
Preference number: 2 (lower is better)
Translates to: ASALDLSSRMTSETLKRPRGRVK*KTMGVK
Trigger: TTTCACACCCATGGTTTTTCATTTGACCCGCCCCCT...CGGGCGTTTGAGTGTTTCAGAAGTCATTCGGGAAGATAAATCCAGTGCGCTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
3UTR-3UTR TCA 90 bp ACAAGCAAGAGAAGGGTCTTGAATCTTGTATCCAGCTCTGACCACAGAGGCTGCTTGTGCAATGGGCTCTaGTCCTCTCAAAGGAGCTGG +
Preference number: 2 (lower is better)
Translates to: TSKRRVLNLVSSSDHRGCLCNGL*SSQRSW
Trigger: CCAGCTCCTTTGAGAGGATCAGAGCCCATTGCACAA...GCAGCCTCTGTGGTCAGAGCTGGATACAAGATTCAAGACCCTTCTCTTGCTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
3UTR-3UTR TCA 90 bp ACCAGTGATCCGCATTTGGACCACATTAGAAAAGTCTGTCTTCTTTTTCCTAGGCGCTGGTCCAAGCTTTaGATGCAGGTGGCTGCGGCC +
Preference number: 2 (lower is better)
Translates to: TSDPHLDHIRKVCLLFPRRWSKL*MQVAAA
Trigger: GGCCGCAGCCACCTGCATTCAAAGCTTGGACCAGCG...CCTAGGAAAAAGAAGACAGACTTTTCTAATGTGGTCCAAATGCGGATCACTGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
3UTR-3UTR GCA 90 bp ACAAGCAAGAGAAGGGTCTTGAATCTTGTATCCAGCTCTGACCACAGAGGCTGCTGCAGGTCTATACGGTaGTCTTGCTCCCCGATGATC +
Preference number: 2 (lower is better)
Translates to: TSKRRVLNLVSSSDHRGCCRSIR*SCSPMI
Trigger: GATCATCGGGGAGCAAGAGCACCGTATAGACCTGCA...GCAGCCTCTGTGGTCAGAGCTGGATACAAGATTCAAGACCCTTCTCTTGCTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597739.1
3UTR-3UTR GCA 90 bp TCGTATTGCAGGACGCAGTCTGGGATCTGGACGTGTTCCATAGGGATGAGTTGCAGGTCTTCCAAGCTGTaGACGTACTGGATCTTGTTG +
Preference number: 2 (lower is better)
Translates to: SYCRTQSGIWTCSIGMSCRSSKL*TYWILL
Trigger: CAACAAGATCCAGTACGTGCACAGCTTGGAAGACCT...GCAACTCATCCCTATGGAACACGTCCAGATCCCAGACTGCGTCCTGCAATACGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597739.1
3UTR-3UTR CCA 90 bp CATTTCTGTTCTGAAAAACCGCAAAACTCATCGTTGGAAGGATGGGCTGCTGACCATGGCAGGAGCTGCTaGCTTTTGGGGATGGGACTC +
Preference number: 2 (lower is better)
Translates to: HFCSEKPQNSSLEGWAADHGRSC*LLGMGL
Trigger: GAGTCCCATCCCCAAAAGCCAGCAGCTCCTGCCATG...GTCAGCAGCCCATCCTTCCAACGATGAGTTTTGCGGTTTTTCAGAACAGAAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000450849.7
3UTR-3UTR CCA 90 bp GGATGCTGGGTTTCAGAGATGAACGGAGGGGCTGGCACCCTTGGAAGATTGGGAAAGCTGTGCACGTACTaGATCTTGTTGATGAACTTG +
Preference number: 2 (lower is better)
Translates to: GCWVSEMNGGAGTLGRLGKLCTY*ILLMNL
Trigger: CAAGTTCATCAACAAGATCCAGTACGTGCACAGCTT...TCCCAATCTTCCAAGGGTGCCAGCCCCTCCGTTCATCTCTGAAACCCAGCATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597739.1
3UTR CAA 90 bp TCTAGATTACTGGGGTGTCATTTTGCAATCGGAGGACAAGGATGGTaGGCAGCGGCTCTTCTTGTGCAATGGGCTCTGATCCTCTCAAAG +
Preference number: 2 (lower is better)
Translates to: SRLLGCHFAIGGQGW*AAALLVQWALILSK
Trigger: CTTTGAGAGGATCAGAGCCCATTGCACAAGAAGAGCCGCTGCCAACCATCCTTGTCCTCCGATTGCAAAATGACACCCCAGTAATCTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
3UTR-3UTR TCA 90 bp CAGTCTTTCCTCTTCGTATTGCAGGACGCAGTCTGGGATCTGGACGTGTTCCATGCAAGAGAAGGGTCTTaGATCTTGTATCCAGCTCTG +
Preference number: 2 (lower is better)
Translates to: QSFLFVLQDAVWDLDVFHAREGS*ILYPAL
Trigger: CAGAGCTGGATACAAGATTCAAGACCCTTCTCTTGC...ATGGAACACGTCCAGATCCCAGACTGCGTCCTGCAATACGAAGAGGAAAGACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597739.1
3UTR-3UTR TCA 90 bp ACCCAGCCACTTTTGTCATCTTGTGTTGGCTTTGGCAGCGACACCATTCACTGGCCTGTGCCCGGGATTTaGCATTTGGGAAACAAATGT +
Preference number: 2 (lower is better)
Translates to: TQPLLSSCVGFGSDTIHWPVPGI*HLGNKC
Trigger: ACATTTGTTTCCCAAATGTCAAATCCCGGGCACAGG...CCAGTGAATGGTGTCGCTGCCAAAGCCAACACAAGATGACAAAAGTGGCTGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450849.7
3UTR-3UTR TCA 90 bp GATGAGTTGCTCCAGGTCTTCCAAGCTGTGCACGTACTGGATCTTGTTGATGAAGGAAGAGGTTCTCCATaGTGTAGTGGTAGTCGGGGA +
Preference number: 2 (lower is better)
Translates to: DELLQVFQAVHVLDLVDEGRGSP*CSGSRG
Trigger: TCCCCGACTACCACTACATCATGGAGAACCTCTTCC...TTCATCAACAAGATCCAGTACGTGCACAGCTTGGAAGACCTGGAGCAACTCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597739.1
3UTR-3UTR GCA 90 bp CTGATACAAATCCATCTCAAAGCCCATCTGTGGACGGTGCAGGTCGTGGCCCAGTGGAATAACCCCAAATaGAATTCCTTGCTGTCTCAG +
Preference number: 2 (lower is better)
Translates to: LIQIHLKAHLWTVQVVAQWNNPK*NSLLSQ
Trigger: CTGAGACAGCAAGGAATTGCATTTGGGGTTATTCCA...CTGGGCCACGACCTGCACCGTCCACAGATGGGCTTTGAGATGGATTTGTATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450849.7
3UTR-3UTR CCA 90 bp CAGGTAGGGCCTCACTTGTCACTTGATTGCTGCTGTAGACACTCAATTATTAGGGAGGACAAGGATGGTTaGCAGCGGCTCTTCTTGTGC +
Preference number: 2 (lower is better)
Translates to: QVGPHLSLDCCCRHSIIREDKDG*QRLFLC
Trigger: GCACAAGAAGAGCCGCTGCCAACCATCCTTGTCCTC...CCTAATAATTGAGTGTCTACAGCAGCAATCAAGTGACAAGTGAGGCCCTACCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450849.7
3UTR-3UTR CCA 90 bp CATTTCTGTTCTGAAAAACCGCAAAACTCATCGTTGGAAGGATGGGCTGCTGACAGCGACACCATTCACTaGGGTGGGAATTCGGGACAG +
Preference number: 2 (lower is better)
Translates to: HFCSEKPQNSSLEGWAADSDTIH*GGNSGQ
Trigger: CTGTCCCGAATTCCCACCCCAGTGAATGGTGTCGCT...GTCAGCAGCCCATCCTTCCAACGATGAGTTTTGCGGTTTTTCAGAACAGAAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450849.7
3UTR-3UTR CCA 90 bp CAGGTAGGGCCTCACTTGTCACTTGATTGCTGCTGTAGACACTCAATTATTAGGGGAGCTGCGTGCCTTTaGTCACCTGGGACAAATCGT +
Preference number: 2 (lower is better)
Translates to: QVGPHLSLDCCCRHSIIRGAACL*SPGTNR
Trigger: ACGATTTGTCCCAGGTGACCAAAGGCACGCAGCTCC...CCTAATAATTGAGTGTCTACAGCAGCAATCAAGTGACAAGTGAGGCCCTACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450849.7
3UTR-3UTR CCA 90 bp CTTCTGGGTCAGGTAGGGCCTCACTTGTCACTTGATTGCTGCTGTAGACACTCAAGGTGTCCGATTGGGTaGAATGAGTTCTTTCCTGTC +
Preference number: 2 (lower is better)
Translates to: LLGQVGPHLSLDCCCRHSRCPIG*NEFFPV
Trigger: GACAGGAAAGAACTCATTCCACCCAATCGGACACCT...TGAGTGTCTACAGCAGCAATCAAGTGACAAGTGAGGCCCTACCTGACCCAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450849.7
3UTR CAA 90 bp GAGTTAAAGGGGCTTGAGAATGTTCTAGATTACTGGGGTGTCATTTaGCAATCGGAGGACAAGGATGGTTGGCAGCGGCTCTTCTTGTGC +
Preference number: 2 (lower is better)
Translates to: ELKGLENVLDYWGVI*QSEDKDGWQRLFLC
Trigger: GCACAAGAAGAGCCGCTGCCAACCATCCTTGTCCTCCGATTGCAAAATGACACCCCAGTAATCTAGAACATTCTCAAGCCCCTTTAACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
3UTR CAA 90 bp ATGACTTCTGAAACACTCAAACGCCCGATACCCTGTATCTTCCTCTaGCTAGGTCTGCCTATTTCAGAGCCAGTTTCTGAGCCTCTGCTG +
Preference number: 2 (lower is better)
Translates to: MTSETLKRPIPCIFL*LGLPISEPVSEPLL
Trigger: CAGCAGAGGCTCAGAAACTGGCTCTGAAATAGGCAGACCTAGCAAGAGGAAGATACAGGGTATCGGGCGTTTGAGTGTTTCAGAAGTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
3UTR-3UTR TCA 90 bp ACAAGCAAGAGAAGGGTCTTGAATCTTGTATCCAGCTCTGACCACAGAGGCTGCGCAAGAGAAGGGTCTTaGATCTTGTATCCAGCTCTG +
Preference number: 2 (lower is better)
Translates to: TSKRRVLNLVSSSDHRGCAREGS*ILYPAL
Trigger: CAGAGCTGGATACAAGATTCAAGACCCTTCTCTTGC...GCAGCCTCTGTGGTCAGAGCTGGATACAAGATTCAAGACCCTTCTCTTGCTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000450849.7
ENST00000597739.1
ENST00000600960.1
3UTR-3UTR GCA 90 bp ACCCAGCCACTTTTGTCATCTTGTGTTGGCTTTGGCAGCGACACCATTCACTGGATACCACCAGTTCCCTaGCATCATCGTTGGAATAAC +
Preference number: 2 (lower is better)
Translates to: TQPLLSSCVGFGSDTIHWIPPVP*HHRWNN
Trigger: GTTATTCCAACGATGATGGCAGGGAACTGGTGGTAT...CCAGTGAATGGTGTCGCTGCCAAAGCCAACACAAGATGACAAAAGTGGCTGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450849.7
3UTR-3UTR CCA 90 bp GAATGTTCTAGATTACTGGGGTGTCATTTTGCAATCGGAGGACAAGGATGGTTGGAGATCTGGGGCCAGTaGGCGTCTGACAGAGGTTTT +
Preference number: 2 (lower is better)
Translates to: ECSRLLGCHFAIGGQGWLEIWGQ*ASDRGF
Trigger: AAAACCTCTGTCAGACGCCCACTGGCCCCAGATCTC...CAACCATCCTTGTCCTCCGATTGCAAAATGACACCCCAGTAATCTAGAACATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
3UTR-3UTR CCA 90 bp ACAAGCAAGAGAAGGGTCTTGAATCTTGTATCCAGCTCTGACCACAGAGGCTGCGCTCTTCTTGTGCAATaGGCTCTGATCCTCTCAAAG +
Preference number: 2 (lower is better)
Translates to: TSKRRVLNLVSSSDHRGCALLVQ*ALILSK
Trigger: CTTTGAGAGGATCAGAGCCCATTGCACAAGAAGAGC...GCAGCCTCTGTGGTCAGAGCTGGATACAAGATTCAAGACCCTTCTCTTGCTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
3UTR-3UTR CCA 90 bp GAATGTTCTAGATTACTGGGGTGTCATTTTGCAATCGGAGGACAAGGATGGTTGGAGGACAAGGATGGTTaGCAGCGGCTCTTCTTGTGC +
Preference number: 2 (lower is better)
Translates to: ECSRLLGCHFAIGGQGWLEDKDG*QRLFLC
Trigger: GCACAAGAAGAGCCGCTGCCAACCATCCTTGTCCTC...CAACCATCCTTGTCCTCCGATTGCAAAATGACACCCCAGTAATCTAGAACATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
3UTR-3UTR CCA 90 bp CATTTCTGTTCTGAAAAACCGCAAAACTCATCGTTGGAAGGATGGGCTGCTGACATCGGAGGACAAGGATaGTTGGCAGCGGCTCTTCTT +
Preference number: 2 (lower is better)
Translates to: HFCSEKPQNSSLEGWAADIGGQG*LAAALL
Trigger: AAGAAGAGCCGCTGCCAACCATCCTTGTCCTCCGAT...GTCAGCAGCCCATCCTTCCAACGATGAGTTTTGCGGTTTTTCAGAACAGAAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450849.7
3UTR-3UTR CCA 90 bp CGGTTAAGGCCCAGCAGTTCTTGTCACTGTTGGGTTAGAACGATTCATGCTGGAATCTTGTGTTGGCTTTaGCAGCGACACCATTCACTG +
Preference number: 2 (lower is better)
Translates to: RLRPSSSCHCWVRTIHAGILCWL*QRHHSL
Trigger: CAGTGAATGGTGTCGCTGCCAAAGCCAACACAAGAT...TCCAGCATGAATCGTTCTAACCCAACAGTGACAAGAACTGCTGGGCCTTAACCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450849.7
3UTR CAA 90 bp TGTCACTTGATTGCTGCTGTAGACACTCAATTATTAGGTGTCCGATaGGGTGGAATGAGTTCTTTCCTGTCCCCGTCTCCTGTCTGTGAC +
Preference number: 2 (lower is better)
Translates to: CHLIAAVDTQLLGVR*GGMSSFLSPSPVCD
Trigger: GTCACAGACAGGAGACGGGGACAGGAAAGAACTCATTCCACCCAATCGGACACCTAATAATTGAGTGTCTACAGCAGCAATCAAGTGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450849.7
3UTR-3UTR TCA 90 bp CTTCTGGGTCAGGTAGGGCCTCACTTGTCACTTGATTGCTGCTGTAGACACTCAATGTTTTCAAGCAGCTaGAAAGGATGCTGGGTTTCA +
Preference number: 2 (lower is better)
Translates to: LLGQVGPHLSLDCCCRHSMFSSS*KGCWVS
Trigger: TGAAACCCAGCATCCTTTTCAGCTGCTTGAAAACAT...TGAGTGTCTACAGCAGCAATCAAGTGACAAGTGAGGCCCTACCTGACCCAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450849.7
3UTR-3UTR TCA 90 bp GCCAGCGCACTGGATTTATCTTCCCGAATGACTTCTGAAACACTCAAACGCCCGATGTTTTCAAGCAGCTaGAAAGGATGCTGGGTTTCA +
Preference number: 2 (lower is better)
Translates to: ASALDLSSRMTSETLKRPMFSSS*KGCWVS
Trigger: TGAAACCCAGCATCCTTTTCAGCTGCTTGAAAACAT...CGGGCGTTTGAGTGTTTCAGAAGTCATTCGGGAAGATAAATCCAGTGCGCTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
3UTR-3UTR TCA 90 bp GATGAGATCTGGGGCCAGTGGGCGTCTGACAGAGGTTTTCTGGCATCTGGAATCATTTATCTTCCCGAATaGCTTCTGAAACACTCAAAC +
Preference number: 2 (lower is better)
Translates to: DEIWGQWASDRGFLASGIIYLPE*LLKHSN
Trigger: GTTTGAGTGTTTCAGAAGTCATTCGGGAAGATAAAT...GATTCCAGATGCCAGAAAACCTCTGTCAGACGCCCACTGGCCCCAGATCTCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
3UTR-3UTR GCA 90 bp ACCAGTGATCCGCATTTGGACCACATTAGAAAAGTCTGTCTTCTTTTTCCTAGGTTGAATGCAGGTGGCTaGGGCCAGCGCACTGGATTT +
Preference number: 2 (lower is better)
Translates to: TSDPHLDHIRKVCLLFPRLNAGG*GQRTGF
Trigger: AAATCCAGTGCGCTGGCCGCAGCCACCTGCATTCAA...CCTAGGAAAAAGAAGACAGACTTTTCTAATGTGGTCCAAATGCGGATCACTGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
3UTR-3UTR GCA 90 bp CATTTCTGTTCTGAAAAACCGCAAAACTCATCGTTGGAAGGATGGGCTGCTGACCTTTTGAGTCAGTCTTaGTCTGTCTCCCAGGCTGGA +
Preference number: 2 (lower is better)
Translates to: HFCSEKPQNSSLEGWAADLLSQS*SVSQAG
Trigger: TCCAGCCTGGGAGACAGAGCAAGACTGACTCAAAAG...GTCAGCAGCCCATCCTTCCAACGATGAGTTTTGCGGTTTTTCAGAACAGAAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000450849.7
3UTR-3UTR CCA 90 bp GTCTCGATGTCATCCACGTTAATATCCAGGTCATCAGGGGTATCCAAGAAGTCAAGAAATGTTGATCTCTaGGGCCACCAGCGTCTTCCT +
Preference number: 2 (lower is better)
Translates to: VSMSSTLISRSSGVSKKSRNVDL*GHQRLP
Trigger: AGGAAGACGCTGGTGGCCCCAGAGATCAACATTTCT...TGACTTCTTGGATACCCCTGATGACCTGGATATTAACGTGGATGACATCGAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597739.1
3UTR-3UTR TCA 90 bp CATTTCTGTTCTGAAAAACCGCAAAACTCATCGTTGGAAGGATGGGCTGCTGACTTCCCGAATGACTTCTaGAACACTCAAACGCCCGAT +
Preference number: 2 (lower is better)
Translates to: HFCSEKPQNSSLEGWAADFPNDF*NTQTPD
Trigger: ATCGGGCGTTTGAGTGTTTCAGAAGTCATTCGGGAA...GTCAGCAGCCCATCCTTCCAACGATGAGTTTTGCGGTTTTTCAGAACAGAAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450849.7
3UTR-3UTR CCA 90 bp ACCAGTGATCCGCATTTGGACCACATTAGAAAAGTCTGTCTTCTTTTTCCTAGGTCTGAGGCCGCATTCTaGAGGGAAAGGCACAGGAAA +
Preference number: 2 (lower is better)
Translates to: TSDPHLDHIRKVCLLFPRSEAAF*RERHRK
Trigger: TTTCCTGTGCCTTTCCCTCCAGAATGCGGCCTCAGA...CCTAGGAAAAAGAAGACAGACTTTTCTAATGTGGTCCAAATGCGGATCACTGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
3UTR-3UTR GCA 90 bp GAATGTTCTAGATTACTGGGGTGTCATTTTGCAATCGGAGGACAAGGATGGTTGACTGGGGTGTCATTTTaGAATCGGAGGACAAGGATG +
Preference number: 2 (lower is better)
Translates to: ECSRLLGCHFAIGGQGWLTGVSF*NRRTRM
Trigger: CATCCTTGTCCTCCGATTGCAAAATGACACCCCAGT...CAACCATCCTTGTCCTCCGATTGCAAAATGACACCCCAGTAATCTAGAACATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
3UTR-3UTR TCA 90 bp GTGACAAGCAAGAGAAGGGTCTTGAATCTTGTATCCAGCTCTGACCACAGAGGCATTTATCTTCCCGAATaGCTTCTGAAACACTCAAAC +
Preference number: 2 (lower is better)
Translates to: VTSKRRVLNLVSSSDHRGIYLPE*LLKHSN
Trigger: GTTTGAGTGTTTCAGAAGTCATTCGGGAAGATAAAT...GCCTCTGTGGTCAGAGCTGGATACAAGATTCAAGACCCTTCTCTTGCTTGTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
3UTR-3UTR GCA 90 bp CATTTCTGTTCTGAAAAACCGCAAAACTCATCGTTGGAAGGATGGGCTGCTGACTTGTCACTTGATTGCTaGTGTAGACACTCAATTATT +
Preference number: 2 (lower is better)
Translates to: HFCSEKPQNSSLEGWAADLSLDC*CRHSII
Trigger: AATAATTGAGTGTCTACAGCAGCAATCAAGTGACAA...GTCAGCAGCCCATCCTTCCAACGATGAGTTTTGCGGTTTTTCAGAACAGAAATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450849.7
3UTR TCA 72 bp GTCGTGGCCCAGCTGGGAACGGTGGCCCCGGCTGTTTaGCCTCGGCATGCCTGCCGACAGGTGGCCTCGCCG +
Preference number: 3 (lower is better)
Translates to: VVAQLGTVAPAV*PRHACRQVASP
Trigger: CGGCGAGGCCACCTGTCGGCAGGCATGCCGAGGTCAAACAGCCGGGGCCACCGTTCCCAGCTGGGCCACGAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450849.7
3UTR GCA 72 bp ACAGGCGCCCGTTGGCGGCGCTGCCGTCCTCCGTCGTaGCGTCCCCAAATAGATCCGCGCTGTCCCCGGGCA +
Preference number: 3 (lower is better)
Translates to: TGARWRRCRPPS*RPQIDPRCPRA
Trigger: TGCCCGGGGACAGCGCGGATCTATTTGGGGACGGCACGACGGAGGACGGCAGCGCCGCCAACGGGCGCCTGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597739.1
3UTR GCA 72 bp GGAGCGGAGGCCACCGACGCCACGCGGGCCACCCCCTaGGCTTCTTGCCTTCCTCGGCTGAGAGTTCGTGAG +
Preference number: 3 (lower is better)
Translates to: GAEATDATRATP*ASCLPRLRVRE
Trigger: CTCACGAACTCTCAGCCGAGGAAGGCAAGAAGCGCAGGGGGTGGCCCGCGTGGCGTCGGTGGCCTCCGCTCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000450849.7
ENST00000597739.1
ENST00000600960.1
3UTR GCA 72 bp GCTGGGAACGGTGGCCCCGGCTGTTTGACCTCGGCATaGCTGCCGACAGGTGGCCTCGCCGGGGGCCTCTTT +
Preference number: 3 (lower is better)
Translates to: AGNGGPGCLTSA*LPTGGLAGGLF
Trigger: AAAGAGGCCCCCGGCGAGGCCACCTGTCGGCAGGCATGCCGAGGTCAAACAGCCGGGGCCACCGTTCCCAGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450849.7
3UTR-3UTR CAA 90 bp CGGAGGCCACCGACGCCACGCGGGCCACCCCCTGCGCTTCTTGCCTTCCTCGGCGAACGTGACTTAGGGTaGGAACTTGGGCCACGTGGC +
Preference number: 3 (lower is better)
Translates to: RRPPTPRGPPPALLAFLGERDLG*ELGPRG
Trigger: GCCACGTGGCCCAAGTTCCAACCCTAAGTCACGTTC...GCCGAGGAAGGCAAGAAGCGCAGGGGGTGGCCCGCGTGGCGTCGGTGGCCTCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600960.1
3UTR GCA 72 bp GCCACCGACGCCACGCGGGCCACCCCCTGCGCTTCTTaGCTTCCTCGGCTGAGAGTTCGTGAGTGTGGAAGG +
Preference number: 3 (lower is better)
Translates to: ATDATRATPCAS*LPRLRVRECGR
Trigger: CCTTCCACACTCACGAACTCTCAGCCGAGGAAGGCAAGAAGCGCAGGGGGTGGCCCGCGTGGCGTCGGTGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000450849.7
ENST00000597739.1
ENST00000600960.1
3UTR CCA 72 bp GGAAAGGCACAGGAAAGGACGCAGACCCAGCCGGGGTaGCGGTGGGTGTCTGTGGCTCCAACCTGGAGCGGG +
Preference number: 3 (lower is better)
Translates to: GKAQERTQTQPG*RWVSVAPTWSG
Trigger: CCCGCTCCAGGTTGGAGCCACAGACACCCACCGCCACCCCGGCTGGGTCTGCGTCCTTTCCTGTGCCTTTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
3UTR CCA 72 bp GGACGCAGACCCAGCCGGGGTGGCGGTGGGTGTCTGTaGCTCCAACCTGGAGCGGGTGACAAGCAAGAGAAG +
Preference number: 3 (lower is better)
Translates to: GRRPSRGGGGCL*LQPGAGDKQEK
Trigger: CTTCTCTTGCTTGTCACCCGCTCCAGGTTGGAGCCACAGACACCCACCGCCACCCCGGCTGGGTCTGCGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
3UTR CCA 72 bp AAGCCCATCTGTGGACGGTGCAGGTCGTGGCCCAGCTaGGAACGGTGGCCCCGGCTGTTTGACCTCGGCATG +
Preference number: 3 (lower is better)
Translates to: KPICGRCRSWPS*ERWPRLFDLGM
Trigger: CATGCCGAGGTCAAACAGCCGGGGCCACCGTTCCCAGCTGGGCCACGACCTGCACCGTCCACAGATGGGCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450849.7
3UTR-3UTR CAA 90 bp GATCCGCGCTGTCCCCGGGCATGTTCTTGGCGGTGGCCACGGGGGTGTCGTCTTGGCACCCTTGGAAGATaGGGACTCAGGATGAGGCAG +
Preference number: 3 (lower is better)
Translates to: DPRCPRACSWRWPRGCRLGTLGR*GLRMRQ
Trigger: CTGCCTCATCCTGAGTCCCAATCTTCCAAGGGTGCC...AAGACGACACCCCCGTGGCCACCGCCAAGAACATGCCCGGGGACAGCGCGGATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597739.1
3UTR-3UTR CAA 90 bp GCAGGAGCGGAGGCCACCGACGCCACGCGGGCCACCCCCTGCGCTTCTTGCCTTCACATATCTCATTCCTaGGTGGGAGGTATTGACGGG +
Preference number: 3 (lower is better)
Translates to: AGAEATDATRATPCASCLHISHS*VGGIDG
Trigger: CCCGTCAATACCTCCCACCAAGGAATGAGATATGTG...AAGGCAAGAAGCGCAGGGGGTGGCCCGCGTGGCGTCGGTGGCCTCCGCTCCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
3UTR-3UTR CAA 90 bp CCGAACAAGAACCCGCTGGTCCAAGCTTTGAATGCAGGTGGCTGCGGCCAGCGCCAACCCGGAACAGCGTaGGCGTGTCCCAGCCTGACG +
Preference number: 3 (lower is better)
Translates to: PNKNPLVQALNAGGCGQRQPGTA*ACPSLT
Trigger: CGTCAGGCTGGGACACGCCAACGCTGTTCCGGGTTG...GCGCTGGCCGCAGCCACCTGCATTCAAAGCTTGGACCAGCGGGTTCTTGTTCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
3UTR TCA 72 bp TCATGTGCAGGTCTATACGGTGCTCTTGCTCCCCGATaGTCACTGTCCGCCACAGGCGCCCGTTGGCGGCGC +
Preference number: 3 (lower is better)
Translates to: SCAGLYGALAPR*SLSATGARWRR
Trigger: GCGCCGCCAACGGGCGCCTGTGGCGGACAGTGATCATCGGGGAGCAAGAGCACCGTATAGACCTGCACATGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597739.1
3UTR GCA 72 bp GTCTTGAATCTTGTATCCAGCTCTGACCACAGAGGCTaGGAGCAGGAGCGGAGGCCACCGACGCCACGCGGG +
Preference number: 3 (lower is better)
Translates to: VLNLVSSSDHRG*EQERRPPTPRG
Trigger: CCCGCGTGGCGTCGGTGGCCTCCGCTCCTGCTCGCAGCCTCTGTGGTCAGAGCTGGATACAAGATTCAAGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000450849.7
ENST00000597739.1
ENST00000600960.1
3UTR CCA 72 bp GGTCACCTGGGACAAATCGTGGCAGCTGGGCCTGGCTaGCATCTATCTGCTGGAGCCTGTCTCCTCCGGGCA +
Preference number: 3 (lower is better)
Translates to: GHLGQIVAAGPG*HLSAGACLLRA
Trigger: TGCCCGGAGGAGACAGGCTCCAGCAGATAGATGCCAGCCAGGCCCAGCTGCCACGATTTGTCCCAGGTGACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450849.7
3UTR CCA 72 bp ATAGATCCGCGCTGTCCCCGGGCATGTTCTTGGCGGTaGCCACGGGGGTGTCGTCTTCCCACTCCAGTTCGT +
Preference number: 3 (lower is better)
Translates to: IDPRCPRACSWR*PRGCRLPTPVR
Trigger: ACGAACTGGAGTGGGAAGACGACACCCCCGTGGCCACCGCCAAGAACATGCCCGGGGACAGCGCGGATCTAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597739.1
3UTR-3UTR CAA 90 bp GCAGGAGCGGAGGCCACCGACGCCACGCGGGCCACCCCCTGCGCTTCTTGCCTTCCCTGTATCTTCCTCTaGCTAGGTCTGCCTATTTCA +
Preference number: 3 (lower is better)
Translates to: AGAEATDATRATPCASCLPCIFL*LGLPIS
Trigger: TGAAATAGGCAGACCTAGCAAGAGGAAGATACAGGG...AAGGCAAGAAGCGCAGGGGGTGGCCCGCGTGGCGTCGGTGGCCTCCGCTCCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
3UTR-3UTR CAA 90 bp ACCCTGATACAAATCCATCTCAAAGCCCATCTGTGGACGGTGCAGGTCGTGGCCGGTGGCCCCGGCTGTTaGACCTCGGCATGCCTGCCG +
Preference number: 3 (lower is better)
Translates to: TLIQIHLKAHLWTVQVVAGGPGC*TSACLP
Trigger: CGGCAGGCATGCCGAGGTCAAACAGCCGGGGCCACC...GGCCACGACCTGCACCGTCCACAGATGGGCTTTGAGATGGATTTGTATCAGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450849.7
3UTR TCA 72 bp GAGGGGCTGGCACCCTTGGAAGATTGGGACTCAGGATaGGGCAGGATGAGATCTGGGGCCAGTGGGCGTCTG +
Preference number: 3 (lower is better)
Translates to: EGLAPLEDWDSG*GRMRSGASGRL
Trigger: CAGACGCCCACTGGCCCCAGATCTCATCCTGCCTCATCCTGAGTCCCAATCTTCCAAGGGTGCCAGCCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000450849.7
ENST00000597739.1
ENST00000600960.1
3UTR TCA 72 bp ATGTCCCTAAATGTCCCAGCCTCCCCAGGGCAATGCTaGGACCCAGAGGTGTCCCGTCACAGCCGGTGGCTC +
Preference number: 3 (lower is better)
Translates to: MSLNVPASPGQC*DPEVSRHSRWL
Trigger: GAGCCACCGGCTGTGACGGGACACCTCTGGGTCTCAGCATTGCCCTGGGGAGGCTGGGACATTTAGGGACAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450849.7
3UTR CCA 72 bp TCAGCCAGCCGATTCCAGGCATCCTCCGCCGGGGCGTaGCACCGTTCAGGTACACGATCATGTAGTCCTCAG +
Preference number: 3 (lower is better)
Translates to: SASRFQASSAGA*HRSGTRSCSPQ
Trigger: CTGAGGACTACATGATCGTGTACCTGAACGGTGCCACGCCCCGGCGGAGGATGCCTGGAATCGGCTGGCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597739.1
3UTR-3UTR CAA 90 bp GACCTCGGCATGCCTGCCGACAGGTGGCCTCGCCGGGGGCCTCTTTTGCTCTGGCCCTGTATCTTCCTCTaGCTAGGTCTGCCTATTTCA +
Preference number: 3 (lower is better)
Translates to: DLGMPADRWPRRGPLLLWPCIFL*LGLPIS
Trigger: TGAAATAGGCAGACCTAGCAAGAGGAAGATACAGGG...CCAGAGCAAAAGAGGCCCCCGGCGAGGCCACCTGTCGGCAGGCATGCCGAGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450849.7
3UTR GCA 72 bp TGGCCACGGGGGTGTCGTCTTCCCACTCCAGTTCGTTaGCATTCCCCAGGAACTCCAGCGAGTCGGTCTCAT +
Preference number: 3 (lower is better)
Translates to: WPRGCRLPTPVR*HSPGTPASRSH
Trigger: ATGAGACCGACTCGCTGGAGTTCCTGGGGAATGGCAACGAACTGGAGTGGGAAGACGACACCCCCGTGGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597739.1
3UTR CCA 72 bp TTGTGTTGGCTTTGGCAGCGACACCATTCACTGGGGTaGGAATTCGGGACAGGGTCTTGCCCCTGTGCCCGG +
Preference number: 3 (lower is better)
Translates to: LCWLWQRHHSLG*EFGTGSCPCAR
Trigger: CCGGGCACAGGGGCAAGACCCTGTCCCGAATTCCCACCCCAGTGAATGGTGTCGCTGCCAAAGCCAACACAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450849.7
3UTR CCA 72 bp TGGAGCTGCGTGCCTTTGGTCACCTGGGACAAATCGTaGCAGCTGGGCCTGGCTGGCATCTATCTGCTGGAG +
Preference number: 3 (lower is better)
Translates to: WSCVPLVTWDKS*QLGLAGIYLLE
Trigger: CTCCAGCAGATAGATGCCAGCCAGGCCCAGCTGCCACGATTTGTCCCAGGTGACCAAAGGCACGCAGCTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450849.7
3UTR-3UTR CAA 90 bp CCCCGGGCATGTTCTTGGCGGTGGCCACGGGGGTGTCGTCTTCCCACTCCAGTTCTTCTTCCATGTCCTTaGTTATGCTCACGTCGCCTC +
Preference number: 3 (lower is better)
Translates to: PRACSWRWPRGCRLPTPVLLPCP*LCSRRL
Trigger: GAGGCGACGTGAGCATAACAAAGGACATGGAAGAAG...AACTGGAGTGGGAAGACGACACCCCCGTGGCCACCGCCAAGAACATGCCCGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597739.1
3UTR TCA 72 bp GGCGTGTCCCAGCCTGACGCTGGGTTGGGGGAGCAGTaGGGTCCACATATCTCATTCCTTGGTGGGAGGTAT +
Preference number: 3 (lower is better)
Translates to: GVSQPDAGLGEQ*GPHISFLGGRY
Trigger: ATACCTCCCACCAAGGAATGAGATATGTGGACCTCACTGCTCCCCCAACCCAGCGTCAGGCTGGGACACGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
3UTR TCA 72 bp CTTCAGTTTCGCCTGCCTGTTGTCTGTGACTGCTGGTaGTCCAAAGGGGCGTGGGTGGGCCACGGCATAACG +
Preference number: 3 (lower is better)
Translates to: LQFRLPVVCDCW*SKGAWVGHGIT
Trigger: CGTTATGCCGTGGCCCACCCACGCCCCTTTGGATCACCAGCAGTCACAGACAACAGGCAGGCGAAACTGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450849.7
3UTR TCA 72 bp GAGTTGGGGTCTTCAGTTTCGCCTGCCTGTTGTCTGTaGCTGCTGGTGATCCAAAGGGGCGTGGGTGGGCCA +
Preference number: 3 (lower is better)
Translates to: ELGSSVSPACCL*LLVIQRGVGGP
Trigger: TGGCCCACCCACGCCCCTTTGGATCACCAGCAGTCACAGACAACAGGCAGGCGAAACTGAAGACCCCAACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450849.7
3UTR CCA 72 bp AATCGTGGCAGCTGGGCCTGGCTGGCATCTATCTGCTaGAGCCTGTCTCCTCCGGGCAGTCTGATAATCAGG +
Preference number: 3 (lower is better)
Translates to: NRGSWAWLASIC*SLSPPGSLIIR
Trigger: CCTGATTATCAGACTGCCCGGAGGAGACAGGCTCCAGCAGATAGATGCCAGCCAGGCCCAGCTGCCACGATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450849.7
3UTR CCA 72 bp AACGATTCATGCTGGAGCTGCGTGCCTTTGGTCACCTaGGACAAATCGTGGCAGCTGGGCCTGGCTGGCATC +
Preference number: 3 (lower is better)
Translates to: NDSCWSCVPLVT*DKSWQLGLAGI
Trigger: GATGCCAGCCAGGCCCAGCTGCCACGATTTGTCCCAGGTGACCAAAGGCACGCAGCTCCAGCATGAATCGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450849.7
3UTR CCA 72 bp GCCTCTTTTGCTCTGGAGGGTCCGCTGGGGCTGAGTTaGGGTCTTCAGTTTCGCCTGCCTGTTGTCTGTGAC +
Preference number: 3 (lower is better)
Translates to: ASFALEGPLGLS*GLQFRLPVVCD
Trigger: GTCACAGACAACAGGCAGGCGAAACTGAAGACCCCAACTCAGCCCCAGCGGACCCTCCAGAGCAAAAGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450849.7
3UTR CCA 72 bp CCCACCCTGATACAAATCCATCTCAAAGCCCATCTGTaGACGGTGCAGGTCGTGGCCCAGCTGGGAACGGTG +
Preference number: 3 (lower is better)
Translates to: PTLIQIHLKAHL*TVQVVAQLGTV
Trigger: CACCGTTCCCAGCTGGGCCACGACCTGCACCGTCCACAGATGGGCTTTGAGATGGATTTGTATCAGGGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450849.7
3UTR-3UTR CAA 90 bp CTGACGCTGGGTTGGGGGAGCAGTGAGGTCCACATATCTCATTCCTTGGTGGGAGAGGGGCTGGCACCCTaGGAAGATTGGGACTCAGGA +
Preference number: 3 (lower is better)
Translates to: LTLGWGSSEVHISHSLVGEGLAP*EDWDSG
Trigger: TCCTGAGTCCCAATCTTCCAAGGGTGCCAGCCCCTC...TCCCACCAAGGAATGAGATATGTGGACCTCACTGCTCCCCCAACCCAGCGTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
3UTR-3UTR CAA 90 bp AAGCAGCTGAAAAGGATGCTGGGTTTCAGAGATGAACGGAGGGGCTGGCACCCTGAGGGGCTGGCACCCTaGGAAGATTGGGACTCAGGA +
Preference number: 3 (lower is better)
Translates to: KQLKRMLGFRDERRGWHPEGLAP*EDWDSG
Trigger: TCCTGAGTCCCAATCTTCCAAGGGTGCCAGCCCCTC...AGGGTGCCAGCCCCTCCGTTCATCTCTGAAACCCAGCATCCTTTTCAGCTGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000450849.7
ENST00000597739.1
ENST00000600960.1
3UTR-3UTR CAA 90 bp GTCTTCCTCATGGCAGGAGCTGCTGGCTTTTGGGGATGGGACTCGCGCAGGACCCACATATCTCATTCCTaGGTGGGAGGTATTGACGGG +
Preference number: 3 (lower is better)
Translates to: VFLMAGAAGFWGWDSRRTHISHS*VGGIDG
Trigger: CCCGTCAATACCTCCCACCAAGGAATGAGATATGTG...GGTCCTGCGCGAGTCCCATCCCCAAAAGCCAGCAGCTCCTGCCATGAGGAAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450849.7
3UTR-3UTR CAA 90 bp GTCCGATTGGGTGGAATGAGTTCTTTCCTGTCCCCGTCTCCTGTCTGTGACTTGAGGAGCTGCTGGCTTTaGGGGATGGGACTCGCGCAG +
Preference number: 3 (lower is better)
Translates to: VRLGGMSSFLSPSPVCDLRSCWL*GMGLAQ
Trigger: CTGCGCGAGTCCCATCCCCAAAAGCCAGCAGCTCCT...CAAGTCACAGACAGGAGACGGGGACAGGAAAGAACTCATTCCACCCAATCGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450849.7
3UTR-3UTR CAA 90 bp GATGAGTTGCTCCAGGTCTTCCAAGCTGTGCACGTACTGGATCTTGTTGATGAATCCCCGGGCATGTTCTaGGCGGTGGCCACGGGGGTG +
Preference number: 3 (lower is better)
Translates to: DELLQVFQAVHVLDLVDESPGMF*AVATGV
Trigger: CACCCCCGTGGCCACCGCCAAGAACATGCCCGGGGA...TTCATCAACAAGATCCAGTACGTGCACAGCTTGGAAGACCTGGAGCAACTCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597739.1
3UTR TCA 72 bp TGTGGGTCTGGTTGGCCCAGCCTGGATAGCACTTGCTaGGAGGTCAACCACAGAGCTAGGAAGAAGGGCCTG +
Preference number: 3 (lower is better)
Translates to: CGSGWPSLDSTC*EVNHRARKKGL
Trigger: CAGGCCCTTCTTCCTAGCTCTGTGGTTGACCTCTCAGCAAGTGCTATCCAGGCTGGGCCAACCAGACCCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450849.7
3UTR GCA 72 bp ACAAATCGTGGCAGCTGGGCCTGGCTGGCATCTATCTaGTGGAGCCTGTCTCCTCCGGGCAGTCTGATAATC +
Preference number: 3 (lower is better)
Translates to: TNRGSWAWLASI*WSLSPPGSLII
Trigger: GATTATCAGACTGCCCGGAGGAGACAGGCTCCAGCAGATAGATGCCAGCCAGGCCCAGCTGCCACGATTTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450849.7
3UTR CCA 72 bp GGGGGAGCAGTGAGGTCCACATATCTCATTCCTTGGTaGGAGGTATTGACGGGGTTTGCCCGGTGGCTTGAC +
Preference number: 3 (lower is better)
Translates to: GGAVRSTYLIPW*EVLTGFARWLD
Trigger: GTCAAGCCACCGGGCAAACCCCGTCAATACCTCCCACCAAGGAATGAGATATGTGGACCTCACTGCTCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
3UTR-3UTR CAA 90 bp GTCTTCCTCATGGCAGGAGCTGCTGGCTTTTGGGGATGGGACTCGCGCAGGACCCCCAAATGCAATTCCTaGCTGTCTCAGGTCAAGATG +
Preference number: 3 (lower is better)
Translates to: VFLMAGAAGFWGWDSRRTPKCNS*LSQVKM
Trigger: CATCTTGACCTGAGACAGCAAGGAATTGCATTTGGG...GGTCCTGCGCGAGTCCCATCCCCAAAAGCCAGCAGCTCCTGCCATGAGGAAGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000450849.7
3UTR-3UTR CAA 90 bp ACTGGTGCCACCTCTGGCTTCTCTTCAGACCTGGGCAGCACAAACTCCGGCTGGTCTTTCCTCTTCGTATaGCAGGACGCAGTCTGGGAT +
Preference number: 3 (lower is better)
Translates to: TGATSGFSSDLGSTNSGWSFLFV*QDAVWD
Trigger: ATCCCAGACTGCGTCCTGCAATACGAAGAGGAAAGA...CCAGCCGGAGTTTGTGCTGCCCAGGTCTGAAGAGAAGCCAGAGGTGGCACCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597739.1
3UTR TCA 72 bp GATGGGCTGCTGACCAGGACTTTGGGGGAGGGTTTATaGCGCATCCCATGTGTCACCAGAGGGAAACCCAAC +
Preference number: 3 (lower is better)
Translates to: DGLLTRTLGEGL*RIPCVTRGKPN
Trigger: GTTGGGTTTCCCTCTGGTGACACATGGGATGCGTCATAAACCCTCCCCCAAAGTCCTGGTCAGCAGCCCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000450849.7
3UTR CCA 72 bp GGACTCAGGATGAGGCAGGATGAGATCTGGGGCCAGTaGGCGTCTGACAGAGGTTTTCTGGCATCTGGAATC +
Preference number: 3 (lower is better)
Translates to: GLRMRQDEIWGQ*ASDRGFLASGI
Trigger: GATTCCAGATGCCAGAAAACCTCTGTCAGACGCCCACTGGCCCCAGATCTCATCCTGCCTCATCCTGAGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000450849.7
ENST00000597739.1
ENST00000600960.1
3UTR CCA 72 bp GTTGGGGGAGCAGTGAGGTCCACATATCTCATTCCTTaGTGGGAGGTATTGACGGGGTTTGCCCGGTGGCTT +
Preference number: 3 (lower is better)
Translates to: VGGAVRSTYLIP*WEVLTGFARWL
Trigger: AAGCCACCGGGCAAACCCCGTCAATACCTCCCACCAAGGAATGAGATATGTGGACCTCACTGCTCCCCCAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
3UTR CCA 72 bp TCATCTTGTGTTGGCTTTGGCAGCGACACCATTCACTaGGGTGGGAATTCGGGACAGGGTCTTGCCCCTGTG +
Preference number: 3 (lower is better)
Translates to: SSCVGFGSDTIH*GGNSGQGLAPV
Trigger: CACAGGGGCAAGACCCTGTCCCGAATTCCCACCCCAGTGAATGGTGTCGCTGCCAAAGCCAACACAAGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450849.7
3UTR CCA 72 bp GGACCCCTCACTCTGATCCAGAGAAATGTTGATCTCTaGGGCCACCAGCGTCTTCCTCTTACGATGCGCTCC +
Preference number: 3 (lower is better)
Translates to: GPLTLIQRNVDL*GHQRLPLTMRS
Trigger: GGAGCGCATCGTAAGAGGAAGACGCTGGTGGCCCCAGAGATCAACATTTCTCTGGATCAGAGTGAGGGGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597739.1
3UTR-3UTR CAA 90 bp GTGACAAGCAAGAGAAGGGTCTTGAATCTTGTATCCAGCTCTGACCACAGAGGCCCTTGGTGGGAGGTATaGACGGGGTTTGCCCGGTGG +
Preference number: 3 (lower is better)
Translates to: VTSKRRVLNLVSSSDHRGPWWEV*TGFARW
Trigger: CCACCGGGCAAACCCCGTCAATACCTCCCACCAAGG...GCCTCTGTGGTCAGAGCTGGATACAAGATTCAAGACCCTTCTCTTGCTTGTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
3UTR TCA 72 bp CCTCTTGCTAGGTCTGCCTATTTCAGAGCCAGTTTCTaGGCCTCTGCTGTTCCAACCCGGAACAGCGTTGGC +
Preference number: 3 (lower is better)
Translates to: PLARSAYFRASF*ASAVPTRNSVG
Trigger: GCCAACGCTGTTCCGGGTTGGAACAGCAGAGGCTCAGAAACTGGCTCTGAAATAGGCAGACCTAGCAAGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
3UTR GCA 72 bp AAGAACCCGCTGGTCCAAGCTTTGAATGCAGGTGGCTaGGGCCAGCGCACTGGATTTATCTTCCCGAATGAC +
Preference number: 3 (lower is better)
Translates to: KNPLVQALNAGG*GQRTGFIFPND
Trigger: GTCATTCGGGAAGATAAATCCAGTGCGCTGGCCGCAGCCACCTGCATTCAAAGCTTGGACCAGCGGGTTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
3UTR CCA 72 bp CCGTACCCAGCCACTTTTGTCATCTTGTGTTGGCTTTaGCAGCGACACCATTCACTGGGGTGGGAATTCGGG +
Preference number: 3 (lower is better)
Translates to: PYPATFVILCWL*QRHHSLGWEFG
Trigger: CCCGAATTCCCACCCCAGTGAATGGTGTCGCTGCCAAAGCCAACACAAGATGACAAAAGTGGCTGGGTACGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450849.7
3UTR-3UTR CAA 90 bp GCCAGCGCACTGGATTTATCTTCCCGAATGACTTCTGAAACACTCAAACGCCCGGGCACCCTTGGAAGATaGGGACTCAGGATGAGGCAG +
Preference number: 3 (lower is better)
Translates to: ASALDLSSRMTSETLKRPGTLGR*GLRMRQ
Trigger: CTGCCTCATCCTGAGTCCCAATCTTCCAAGGGTGCC...CGGGCGTTTGAGTGTTTCAGAAGTCATTCGGGAAGATAAATCCAGTGCGCTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
3UTR TCA 72 bp TGCTGTCTCAGGTCAAGATGCACTGGACGCTTTCACTaGGGCTCAGTTAATTGTGGGTCTGGTTGGCCCAGC +
Preference number: 3 (lower is better)
Translates to: CCLRSRCTGRFH*GSVNCGSGWPS
Trigger: GCTGGGCCAACCAGACCCACAATTAACTGAGCCTCAGTGAAAGCGTCCAGTGCATCTTGACCTGAGACAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450849.7
3UTR TCA 72 bp ACAGCAGGGACCCCTCACTCTGATCCAGAGAAATGTTaGTCTCTGGGGCCACCAGCGTCTTCCTCTTACGAT +
Preference number: 3 (lower is better)
Translates to: TAGTPHSDPEKC*SLGPPASSSYD
Trigger: ATCGTAAGAGGAAGACGCTGGTGGCCCCAGAGATCAACATTTCTCTGGATCAGAGTGAGGGGTCCCTGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597739.1
3UTR GCA 72 bp GGACCCTGTCCCACAGGGCAAATCTTTCTGTATCACTaGCCCTCAGCACTAAATACCACCAGTTCCCTGCCA +
Preference number: 3 (lower is better)
Translates to: GPCPTGQIFLYH*PSALNTTSSLP
Trigger: TGGCAGGGAACTGGTGGTATTTAGTGCTGAGGGGCAGTGATACAGAAAGATTTGCCCTGTGGGACAGGGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450849.7
3UTR GCA 72 bp CAGTCTGGGATCTGGACGTGTTCCATAGGGATGAGTTaGTCCAGGTCTTCCAAGCTGTGCACGTACTGGATC +
Preference number: 3 (lower is better)
Translates to: QSGIWTCSIGMS*SRSSKLCTYWI
Trigger: GATCCAGTACGTGCACAGCTTGGAAGACCTGGAGCAACTCATCCCTATGGAACACGTCCAGATCCCAGACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597739.1
3UTR CCA 72 bp AAAAGGATGCTGGGTTTCAGAGATGAACGGAGGGGCTaGCACCCTTGGAAGATTGGGACTCAGGATGAGGCA +
Preference number: 3 (lower is better)
Translates to: KRMLGFRDERRG*HPWKIGTQDEA
Trigger: TGCCTCATCCTGAGTCCCAATCTTCCAAGGGTGCCAGCCCCTCCGTTCATCTCTGAAACCCAGCATCCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000450849.7
ENST00000597739.1
ENST00000600960.1
3UTR CCA 72 bp GGACAAGGATGGTTGGCAGCGGCTCTTCTTGTGCAATaGGCTCTGATCCTCTCAAAGGAGCTGGGTGTCATT +
Preference number: 3 (lower is better)
Translates to: GQGWLAAALLVQ*ALILSKELGVI
Trigger: AATGACACCCAGCTCCTTTGAGAGGATCAGAGCCCATTGCACAAGAAGAGCCGCTGCCAACCATCCTTGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
3UTR CCA 72 bp GAGGCTCAGTTAATTGTGGGTCTGGTTGGCCCAGCCTaGATAGCACTTGCTGAGAGGTCAACCACAGAGCTA +
Preference number: 3 (lower is better)
Translates to: EAQLIVGLVGPA*IALAERSTTEL
Trigger: TAGCTCTGTGGTTGACCTCTCAGCAAGTGCTATCCAGGCTGGGCCAACCAGACCCACAATTAACTGAGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450849.7
3UTR CCA 72 bp GAGATGGCCAGCACAGTCCGAATGAACCACGAGGGGTaGACGATGATCAAGGACTTCAGGTTTTTCCGCAAC +
Preference number: 3 (lower is better)
Translates to: EMASTVRMNHEG*TMIKDFRFFRN
Trigger: GTTGCGGAAAAACCTGAAGTCCTTGATCATCGTCCACCCCTCGTGGTTCATTCGGACTGTGCTGGCCATCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597739.1
3UTR-3UTR CAA 90 bp GATGAGATCTGGGGCCAGTGGGCGTCTGACAGAGGTTTTCTGGCATCTGGAATCCTTCTTCCATGTCCTTaGTTATGCTCACGTCGCCTC +
Preference number: 3 (lower is better)
Translates to: DEIWGQWASDRGFLASGILLPCP*LCSRRL
Trigger: GAGGCGACGTGAGCATAACAAAGGACATGGAAGAAG...GATTCCAGATGCCAGAAAACCTCTGTCAGACGCCCACTGGCCCCAGATCTCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000597739.1
ENST00000600960.1
3UTR CCA 72 bp TTACTGGGGTGTCATTTTGCAATCGGAGGACAAGGATaGTTGGCAGCGGCTCTTCTTGTGCAATGGGCTCTG +
Preference number: 3 (lower is better)
Translates to: LLGCHFAIGGQG*LAAALLVQWAL
Trigger: CAGAGCCCATTGCACAAGAAGAGCCGCTGCCAACCATCCTTGTCCTCCGATTGCAAAATGACACCCCAGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
3UTR CCA 72 bp CTTTCCTCTTCGTATTGCAGGACGCAGTCTGGGATCTaGACGTGTTCCATAGGGATGAGTTGCTCCAGGTCT +
Preference number: 3 (lower is better)
Translates to: LSSSYCRTQSGI*TCSIGMSCSRS
Trigger: AGACCTGGAGCAACTCATCCCTATGGAACACGTCCAGATCCCAGACTGCGTCCTGCAATACGAAGAGGAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597739.1
3UTR-3UTR CAA 90 bp GGATGCTGGGTTTCAGAGATGAACGGAGGGGCTGGCACCCTTGGAAGATTGGGAAGCAAGAGAAGGGTCTaGAATCTTGTATCCAGCTCT +
Preference number: 3 (lower is better)
Translates to: GCWVSEMNGGAGTLGRLGSKRRV*NLVSSS
Trigger: AGAGCTGGATACAAGATTCAAGACCCTTCTCTTGCT...TCCCAATCTTCCAAGGGTGCCAGCCCCTCCGTTCATCTCTGAAACCCAGCATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000450849.7
ENST00000597739.1
ENST00000600960.1
3UTR-3UTR CAA 90 bp GATGAGATCTGGGGCCAGTGGGCGTCTGACAGAGGTTTTCTGGCATCTGGAATCTACTGGGGTGTCATTTaGCAATCGGAGGACAAGGAT +
Preference number: 3 (lower is better)
Translates to: DEIWGQWASDRGFLASGIYWGVI*QSEDKD
Trigger: ATCCTTGTCCTCCGATTGCAAAATGACACCCCAGTA...GATTCCAGATGCCAGAAAACCTCTGTCAGACGCCCACTGGCCCCAGATCTCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
3UTR-3UTR CAA 90 bp GCAGTTCTTGTCACTGTTGGGTTAGAACGATTCATGCTGGAGCTGCGTGCCTTTTGCAGTGGCACGATCTaGGCTCACTGTAACCTCTGC +
Preference number: 3 (lower is better)
Translates to: AVLVTVGLERFMLELRAFCSGTI*AHCNLC
Trigger: GCAGAGGTTACAGTGAGCCAAGATCGTGCCACTGCA...AAAGGCACGCAGCTCCAGCATGAATCGTTCTAACCCAACAGTGACAAGAACTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450849.7
3UTR-3UTR CAA 90 bp GATGAGATCTGGGGCCAGTGGGCGTCTGACAGAGGTTTTCTGGCATCTGGAATCAGCAAGAGAAGGGTCTaGAATCTTGTATCCAGCTCT +
Preference number: 3 (lower is better)
Translates to: DEIWGQWASDRGFLASGISKRRV*NLVSSS
Trigger: AGAGCTGGATACAAGATTCAAGACCCTTCTCTTGCT...GATTCCAGATGCCAGAAAACCTCTGTCAGACGCCCACTGGCCCCAGATCTCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000450849.7
ENST00000597739.1
ENST00000600960.1
3UTR-3UTR CAA 90 bp GATGAGATCTGGGGCCAGTGGGCGTCTGACAGAGGTTTTCTGGCATCTGGAATCATCTTGTTGATGAACTaGACGCTGATGAAAGGGCGA +
Preference number: 3 (lower is better)
Translates to: DEIWGQWASDRGFLASGIILLMN*TLMKGR
Trigger: TCGCCCTTTCATCAGCGTCAAGTTCATCAACAAGAT...GATTCCAGATGCCAGAAAACCTCTGTCAGACGCCCACTGGCCCCAGATCTCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597739.1
3UTR CCA 72 bp CTTCAGTCTTTCCTCTTCGTATTGCAGGACGCAGTCTaGGATCTGGACGTGTTCCATAGGGATGAGTTGCTC +
Preference number: 3 (lower is better)
Translates to: LQSFLFVLQDAV*DLDVFHRDELL
Trigger: GAGCAACTCATCCCTATGGAACACGTCCAGATCCCAGACTGCGTCCTGCAATACGAAGAGGAAAGACTGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597739.1
3UTR-3UTR CAA 90 bp GAATGTTCTAGATTACTGGGGTGTCATTTTGCAATCGGAGGACAAGGATGGTTGGGCACCCTTGGAAGATaGGGACTCAGGATGAGGCAG +
Preference number: 3 (lower is better)
Translates to: ECSRLLGCHFAIGGQGWLGTLGR*GLRMRQ
Trigger: CTGCCTCATCCTGAGTCCCAATCTTCCAAGGGTGCC...CAACCATCCTTGTCCTCCGATTGCAAAATGACACCCCAGTAATCTAGAACATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
3UTR-3UTR CAA 90 bp GCCAGCGCACTGGATTTATCTTCCCGAATGACTTCTGAAACACTCAAACGCCCGTACTGGGGTGTCATTTaGCAATCGGAGGACAAGGAT +
Preference number: 3 (lower is better)
Translates to: ASALDLSSRMTSETLKRPYWGVI*QSEDKD
Trigger: ATCCTTGTCCTCCGATTGCAAAATGACACCCCAGTA...CGGGCGTTTGAGTGTTTCAGAAGTCATTCGGGAAGATAAATCCAGTGCGCTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
3UTR TCA 72 bp GGCCAGCGCACTGGATTTATCTTCCCGAATGACTTCTaGAACACTCAAACGCCCGATACCCTGTATCTTCCT +
Preference number: 3 (lower is better)
Translates to: GQRTGFIFPNDF*NTQTPDTLYLP
Trigger: AGGAAGATACAGGGTATCGGGCGTTTGAGTGTTTCAGAAGTCATTCGGGAAGATAAATCCAGTGCGCTGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
3UTR TCA 72 bp CCAGAGACAGGGAGCTCAGTGCTTCTAGAGTCCATCTaGCCAGTGATCCGCATTTGGACCACATTAGAAAAG +
Preference number: 3 (lower is better)
Translates to: PETGSSVLLESI*PVIRIWTTLEK
Trigger: CTTTTCTAATGTGGTCCAAATGCGGATCACTGGTCAGATGGACTCTAGAAGCACTGAGCTCCCTGTCTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
3UTR GCA 72 bp CCAGTTCCCTGCCATCATCGTTGGAATAACCCCAAATaGAATTCCTTGCTGTCTCAGGTCAAGATGCACTGG +
Preference number: 3 (lower is better)
Translates to: PVPCHHRWNNPK*NSLLSQVKMHW
Trigger: CCAGTGCATCTTGACCTGAGACAGCAAGGAATTGCATTTGGGGTTATTCCAACGATGATGGCAGGGAACTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450849.7
3UTR GCA 72 bp CTGGGTCAGGTAGGGCCTCACTTGTCACTTGATTGCTaGTGTAGACACTCAATTATTAGGTGTCCGATTGGG +
Preference number: 3 (lower is better)
Translates to: LGQVGPHLSLDC*CRHSIIRCPIG
Trigger: CCCAATCGGACACCTAATAATTGAGTGTCTACAGCAGCAATCAAGTGACAAGTGAGGCCCTACCTGACCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450849.7
3UTR GCA 72 bp TCCATAGGGATGAGTTGCTCCAGGTCTTCCAAGCTGTaGACGTACTGGATCTTGTTGATGAACTTGACGCTG +
Preference number: 3 (lower is better)
Translates to: SIGMSCSRSSKL*TYWILLMNLTL
Trigger: CAGCGTCAAGTTCATCAACAAGATCCAGTACGTGCACAGCTTGGAAGACCTGGAGCAACTCATCCCTATGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597739.1
3UTR-3UTR CAA 90 bp GCAGTTCTTGTCACTGTTGGGTTAGAACGATTCATGCTGGAGCTGCGTGCCTTTCGTACCCAGCCACTTTaGTCATCTTGTGTTGGCTTT +
Preference number: 3 (lower is better)
Translates to: AVLVTVGLERFMLELRAFRTQPL*SSCVGF
Trigger: AAAGCCAACACAAGATGACAAAAGTGGCTGGGTACG...AAAGGCACGCAGCTCCAGCATGAATCGTTCTAACCCAACAGTGACAAGAACTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450849.7
3UTR GCA 72 bp GCCATCATCGTTGGAATAACCCCAAATGCAATTCCTTaGTGTCTCAGGTCAAGATGCACTGGACGCTTTCAC +
Preference number: 3 (lower is better)
Translates to: AIIVGITPNAIP*CLRSRCTGRFH
Trigger: GTGAAAGCGTCCAGTGCATCTTGACCTGAGACAGCAAGGAATTGCATTTGGGGTTATTCCAACGATGATGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450849.7
3UTR CCA 72 bp TGCTGTAGACACTCAATTATTAGGTGTCCGATTGGGTaGAATGAGTTCTTTCCTGTCCCCGTCTCCTGTCTG +
Preference number: 3 (lower is better)
Translates to: CCRHSIIRCPIG*NEFFPVPVSCL
Trigger: CAGACAGGAGACGGGGACAGGAAAGAACTCATTCCACCCAATCGGACACCTAATAATTGAGTGTCTACAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450849.7
3UTR CCA 72 bp ATGAGTTGCTCCAGGTCTTCCAAGCTGTGCACGTACTaGATCTTGTTGATGAACTTGACGCTGATGAAAGGG +
Preference number: 3 (lower is better)
Translates to: MSCSRSSKLCTY*ILLMNLTLMKG
Trigger: CCCTTTCATCAGCGTCAAGTTCATCAACAAGATCCAGTACGTGCACAGCTTGGAAGACCTGGAGCAACTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597739.1
3UTR GCA 72 bp CTTCTGGGTCAGGTAGGGCCTCACTTGTCACTTGATTaGTGCTGTAGACACTCAATTATTAGGTGTCCGATT +
Preference number: 3 (lower is better)
Translates to: LLGQVGPHLSLD*CCRHSIIRCPI
Trigger: AATCGGACACCTAATAATTGAGTGTCTACAGCAGCAATCAAGTGACAAGTGAGGCCCTACCTGACCCAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450849.7
3UTR-3UTR CAA 90 bp CATTTCTGTTCTGAAAAACCGCAAAACTCATCGTTGGAAGGATGGGCTGCTGACACCAGTGATCCGCATTaGGACCACATTAGAAAAGTC +
Preference number: 3 (lower is better)
Translates to: HFCSEKPQNSSLEGWAADTSDPH*DHIRKV
Trigger: GACTTTTCTAATGTGGTCCAAATGCGGATCACTGGT...GTCAGCAGCCCATCCTTCCAACGATGAGTTTTGCGGTTTTTCAGAACAGAAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000450849.7
3UTR CCA 72 bp TCTGAGTTAAAGGGGCTTGAGAATGTTCTAGATTACTaGGGTGTCATTTTGCAATCGGAGGACAAGGATGGT +
Preference number: 3 (lower is better)
Translates to: SELKGLENVLDY*GVILQSEDKDG
Trigger: ACCATCCTTGTCCTCCGATTGCAAAATGACACCCCAGTAATCTAGAACATTCTCAAGCCCCTTTAACTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
CDS-3UTR CCA 90 bp CGGAGGCCACCGACGCCACGCGGGCCACCCCCTGCGCTTCTTGCCTTCCTCGGCTCACCCAGGGCGACGTaGCCAGCGCCCGCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: RRPPTPRGPPPALLAFLGSPRAT*PAPASS
Trigger: AGAGCTGGCGGGCGCTGGCCACGTCGCCCTGGGTGA...GCCGAGGAAGGCAAGAAGCGCAGGGGGTGGCCCGCGTGGCGTCGGTGGCCTCCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000597739.1
CDS-3UTR CCA 90 bp GCAGGAGCGGAGGCCACCGACGCCACGCGGGCCACCCCCTGCGCTTCTTGCCTTCTGCCCGGGTGCAGCTaGGCATCGCTCACGCTCCCC +
Preference number: 4 (lower is better)
Translates to: AGAEATDATRATPCASCLLPGCS*ASLTLP
Trigger: GGGGAGCGTGAGCGATGCCCAGCTGCACCCGGGCAG...AAGGCAAGAAGCGCAGGGGGTGGCCCGCGTGGCGTCGGTGGCCTCCGCTCCTGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000597739.1
CDS-3UTR TCA 90 bp GGCTGCGAGCAGGAGCGGAGGCCACCGACGCCACGCGGGCCACCCCCTGCGCTTCGCTGGTCCAAGCTTTaGATGCAGGTGGCTGCGGCC +
Preference number: 4 (lower is better)
Translates to: GCEQERRPPTPRGPPPALRWSKL*MQVAAA
Trigger: GGCCGCAGCCACCTGCATTCAAAGCTTGGACCAGCG...AAGCGCAGGGGGTGGCCCGCGTGGCGTCGGTGGCCTCCGCTCCTGCTCGCAGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
3UTR CAA 72 bp GGTCGTGGCCCAGCTGGGAACGGTGGCCCCGGCTGTTaGACCTCGGCATGCCTGCCGACAGGTGGCCTCGCC +
Preference number: 4 (lower is better)
Translates to: GRGPAGNGGPGC*TSACLPTGGLA
Trigger: GGCGAGGCCACCTGTCGGCAGGCATGCCGAGGTCAAACAGCCGGGGCCACCGTTCCCAGCTGGGCCACGACC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450849.7
3UTR CAA 72 bp TGCTCCCCGATGATCACTGTCCGCCACAGGCGCCCGTaGGCGGCGCTGCCGTCCTCCGTCGTGCCGTCCCCA +
Preference number: 4 (lower is better)
Translates to: CSPMITVRHRRP*AALPSSVVPSP
Trigger: TGGGGACGGCACGACGGAGGACGGCAGCGCCGCCAACGGGCGCCTGTGGCGGACAGTGATCATCGGGGAGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597739.1
CDS-3UTR CCA 90 bp GGCTGCGAGCAGGAGCGGAGGCCACCGACGCCACGCGGGCCACCCCCTGCGCTTCACCCCCGTCTCTTCTaGGAGTGGCCTGGGAAGATC +
Preference number: 4 (lower is better)
Translates to: GCEQERRPPTPRGPPPALHPRLF*EWPGKI
Trigger: GATCTTCCCAGGCCACTCCCAGAAGAGACGGGGGTG...AAGCGCAGGGGGTGGCCCGCGTGGCGTCGGTGGCCTCCGCTCCTGCTCGCAGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
CDS-3UTR TCA 90 bp GCAGGAGCGGAGGCCACCGACGCCACGCGGGCCACCCCCTGCGCTTCTTGCCTTGCTCTTGCTCCCCGATaGTCACTGTCCGCCACAGGC +
Preference number: 4 (lower is better)
Translates to: AGAEATDATRATPCASCLALAPR*SLSATG
Trigger: GCCTGTGGCGGACAGTGATCATCGGGGAGCAAGAGC...AAGGCAAGAAGCGCAGGGGGTGGCCCGCGTGGCGTCGGTGGCCTCCGCTCCTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000450849.7
ENST00000597739.1
ENST00000600960.1
CDS-3UTR GCA 90 bp GCAGGAGCGGAGGCCACCGACGCCACGCGGGCCACCCCCTGCGCTTCTTGCCTTTCTGACCACAGAGGCTaGGAGCAGGAGCGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: AGAEATDATRATPCASCLSDHRG*EQERRP
Trigger: TGGCCTCCGCTCCTGCTCGCAGCCTCTGTGGTCAGA...AAGGCAAGAAGCGCAGGGGGTGGCCCGCGTGGCGTCGGTGGCCTCCGCTCCTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000450849.7
ENST00000597739.1
ENST00000600960.1
CDS-3UTR CCA 90 bp GGCTGCGAGCAGGAGCGGAGGCCACCGACGCCACGCGGGCCACCCCCTGCGCTTGCTGGGAAGAGGCACTaGCTTGAAGCAGGGATGACC +
Preference number: 4 (lower is better)
Translates to: GCEQERRPPTPRGPPPALAGKRH*LEAGMT
Trigger: GGTCATCCCTGCTTCAAGCCAGTGCCTCTTCCCAGC...AAGCGCAGGGGGTGGCCCGCGTGGCGTCGGTGGCCTCCGCTCCTGCTCGCAGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000597739.1
CDS-3UTR CCA 90 bp GGCTGCGAGCAGGAGCGGAGGCCACCGACGCCACGCGGGCCACCCCCTGCGCTTGATGAACGGAGGGGCTaGCACCCTTGGAAGATTGGG +
Preference number: 4 (lower is better)
Translates to: GCEQERRPPTPRGPPPALDERRG*HPWKIG
Trigger: CCCAATCTTCCAAGGGTGCCAGCCCCTCCGTTCATC...AAGCGCAGGGGGTGGCCCGCGTGGCGTCGGTGGCCTCCGCTCCTGCTCGCAGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000450849.7
ENST00000597739.1
ENST00000600960.1
CDS-3UTR CCA 90 bp GACCTCGGCATGCCTGCCGACAGGTGGCCTCGCCGGGGGCCTCTTTTGCTCTGGCAGACCCAGCCGGGGTaGCGGTGGGTGTCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: DLGMPADRWPRRGPLLLWQTQPG*RWVSVA
Trigger: AGCCACAGACACCCACCGCCACCCCGGCTGGGTCTG...CCAGAGCAAAAGAGGCCCCCGGCGAGGCCACCTGTCGGCAGGCATGCCGAGGTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR GCA 90 bp CGGAGGCCACCGACGCCACGCGGGCCACCCCCTGCGCTTCTTGCCTTCCTCGGCTGGCTGGCATCTATCTaGTGGAGCCTGTCTCCTCCG +
Preference number: 4 (lower is better)
Translates to: RRPPTPRGPPPALLAFLGWLASI*WSLSPP
Trigger: CGGAGGAGACAGGCTCCAGCAGATAGATGCCAGCCA...GCCGAGGAAGGCAAGAAGCGCAGGGGGTGGCCCGCGTGGCGTCGGTGGCCTCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR CCA 90 bp GGCTGCGAGCAGGAGCGGAGGCCACCGACGCCACGCGGGCCACCCCCTGCGCTTAGGGGCTGGCACCCTTaGAAGATTGGGACTCAGGAT +
Preference number: 4 (lower is better)
Translates to: GCEQERRPPTPRGPPPALRGWHP*KIGTQD
Trigger: ATCCTGAGTCCCAATCTTCCAAGGGTGCCAGCCCCT...AAGCGCAGGGGGTGGCCCGCGTGGCGTCGGTGGCCTCCGCTCCTGCTCGCAGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000450849.7
ENST00000597739.1
ENST00000600960.1
CDS-3UTR CCA 90 bp GACCTCGGCATGCCTGCCGACAGGTGGCCTCGCCGGGGGCCTCTTTTGCTCTGGAACGGGCGGACCCCCTaGAGTTTCTGGTGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: DLGMPADRWPRRGPLLLWNGRTP*SFWWGQ
Trigger: CTGCCCCCACCAGAAACTCCAGGGGGTCCGCCCGTT...CCAGAGCAAAAGAGGCCCCCGGCGAGGCCACCTGTCGGCAGGCATGCCGAGGTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR TCA 90 bp CGGAGGCCACCGACGCCACGCGGGCCACCCCCTGCGCTTCTTGCCTTCCTCGGCGATCCAGAGAAATGTTaGTCTCTGGGGCCACCAGCG +
Preference number: 4 (lower is better)
Translates to: RRPPTPRGPPPALLAFLGDPEKC*SLGPPA
Trigger: CGCTGGTGGCCCCAGAGATCAACATTTCTCTGGATC...GCCGAGGAAGGCAAGAAGCGCAGGGGGTGGCCCGCGTGGCGTCGGTGGCCTCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000450849.7
ENST00000597739.1
ENST00000600960.1
CDS-3UTR TCA 90 bp CGGAGGCCACCGACGCCACGCGGGCCACCCCCTGCGCTTCTTGCCTTCCTCGGCGATTGGGACTCAGGATaGGGCAGGATGAGATCTGGG +
Preference number: 4 (lower is better)
Translates to: RRPPTPRGPPPALLAFLGDWDSG*GRMRSG
Trigger: CCCAGATCTCATCCTGCCTCATCCTGAGTCCCAATC...GCCGAGGAAGGCAAGAAGCGCAGGGGGTGGCCCGCGTGGCGTCGGTGGCCTCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000450849.7
ENST00000597739.1
ENST00000600960.1
CDS-3UTR TCA 90 bp CGGAGGCCACCGACGCCACGCGGGCCACCCCCTGCGCTTCTTGCCTTCCTCGGCTCTTGTATCCAGCTCTaGCCACAGAGGCTGCGAGCA +
Preference number: 4 (lower is better)
Translates to: RRPPTPRGPPPALLAFLGSCIQL*PQRLRA
Trigger: TGCTCGCAGCCTCTGTGGTCAGAGCTGGATACAAGA...GCCGAGGAAGGCAAGAAGCGCAGGGGGTGGCCCGCGTGGCGTCGGTGGCCTCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000450849.7
ENST00000597739.1
ENST00000600960.1
CDS-3UTR TCA 90 bp GCAGGAGCGGAGGCCACCGACGCCACGCGGGCCACCCCCTGCGCTTCTTGCCTTACTCCTGACCTCAGGTaGTCCACCTGTCTCGGTCTC +
Preference number: 4 (lower is better)
Translates to: AGAEATDATRATPCASCLTPDLR*STCLGL
Trigger: GAGACCGAGACAGGTGGATCACCTGAGGTCAGGAGT...AAGGCAAGAAGCGCAGGGGGTGGCCCGCGTGGCGTCGGTGGCCTCCGCTCCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR GCA 90 bp AGGTCTATACGGTGCTCTTGCTCCCCGATGATCACTGTCCGCCACAGGCGCCCGGCCCGTTGGCGGCGCTaGCGTCCTCCGTCGTGCCGT +
Preference number: 4 (lower is better)
Translates to: RSIRCSCSPMITVRHRRPARWRR*RPPSCR
Trigger: ACGGCACGACGGAGGACGGCAGCGCCGCCAACGGGC...CGGGCGCCTGTGGCGGACAGTGATCATCGGGGAGCAAGAGCACCGTATAGACCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597739.1
CDS-3UTR GCA 90 bp GCAGGAGCGGAGGCCACCGACGCCACGCGGGCCACCCCCTGCGCTTCTTGCCTTACCCCCTGCGCTTCTTaGCTTCCTCGGCTGAGAGTT +
Preference number: 4 (lower is better)
Translates to: AGAEATDATRATPCASCLTPCAS*LPRLRV
Trigger: AACTCTCAGCCGAGGAAGGCAAGAAGCGCAGGGGGT...AAGGCAAGAAGCGCAGGGGGTGGCCCGCGTGGCGTCGGTGGCCTCCGCTCCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000450849.7
ENST00000597739.1
ENST00000600960.1
CDS-3UTR GCA 90 bp AATAGATCCGCGCTGTCCCCGGGCATGTTCTTGGCGGTGGCCACGGGGGTGTCGACGCGGGCCACCCCCTaGGCTTCTTGCCTTCCTCGG +
Preference number: 4 (lower is better)
Translates to: NRSALSPGMFLAVATGVSTRATP*ASCLPR
Trigger: CCGAGGAAGGCAAGAAGCGCAGGGGGTGGCCCGCGT...CGACACCCCCGTGGCCACCGCCAAGAACATGCCCGGGGACAGCGCGGATCTATT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000597739.1
CDS-3UTR GCA 90 bp GGCTGCGAGCAGGAGCGGAGGCCACCGACGCCACGCGGGCCACCCCCTGCGCTTCATCAGCTTGATCTGTaGAGGGGCTGGAGGCTTGTT +
Preference number: 4 (lower is better)
Translates to: GCEQERRPPTPRGPPPALHQLDL*RGWRLV
Trigger: AACAAGCCTCCAGCCCCTGCACAGATCAAGCTGATG...AAGCGCAGGGGGTGGCCCGCGTGGCGTCGGTGGCCTCCGCTCCTGCTCGCAGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000600960.1
CDS-3UTR CCA 90 bp GGCTGCGAGCAGGAGCGGAGGCCACCGACGCCACGCGGGCCACCCCCTGCGCTTATCGGAGGACAAGGATaGTTGGCAGCGGCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: GCEQERRPPTPRGPPPALIGGQG*LAAALL
Trigger: AAGAAGAGCCGCTGCCAACCATCCTTGTCCTCCGAT...AAGCGCAGGGGGTGGCCCGCGTGGCGTCGGTGGCCTCCGCTCCTGCTCGCAGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
CDS-3UTR CCA 90 bp GGCTGCGAGCAGGAGCGGAGGCCACCGACGCCACGCGGGCCACCCCCTGCGCTTAATTGTGGGTCTGGTTaGCCCAGCCTGGATAGCACT +
Preference number: 4 (lower is better)
Translates to: GCEQERRPPTPRGPPPALNCGSG*PSLDST
Trigger: AGTGCTATCCAGGCTGGGCCAACCAGACCCACAATT...AAGCGCAGGGGGTGGCCCGCGTGGCGTCGGTGGCCTCCGCTCCTGCTCGCAGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR TCA 90 bp GCAGGAGCGGAGGCCACCGACGCCACGCGGGCCACCCCCTGCGCTTCTTGCCTTGATCCAGAGAAATGTTaGTCTCTGGGGCCACCAGCG +
Preference number: 4 (lower is better)
Translates to: AGAEATDATRATPCASCLDPEKC*SLGPPA
Trigger: CGCTGGTGGCCCCAGAGATCAACATTTCTCTGGATC...AAGGCAAGAAGCGCAGGGGGTGGCCCGCGTGGCGTCGGTGGCCTCCGCTCCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000450849.7
ENST00000597739.1
ENST00000600960.1
CDS-3UTR TCA 90 bp ACAGGCGCCCGTTGGCGGCGCTGCCGTCCTCCGTCGTGCCGTCCCCAAATAGATGCTCTTGCTCCCCGATaGTCACTGTCCGCCACAGGC +
Preference number: 4 (lower is better)
Translates to: TGARWRRCRPPSCRPQIDALAPR*SLSATG
Trigger: GCCTGTGGCGGACAGTGATCATCGGGGAGCAAGAGC...ATCTATTTGGGGACGGCACGACGGAGGACGGCAGCGCCGCCAACGGGCGCCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597739.1
CDS-3UTR TCA 90 bp CGGAGGCCACCGACGCCACGCGGGCCACCCCCTGCGCTTCTTGCCTTCCTCGGCTTCAGAGCCAGTTTCTaGGCCTCTGCTGTTCCAACC +
Preference number: 4 (lower is better)
Translates to: RRPPTPRGPPPALLAFLGFRASF*ASAVPT
Trigger: GGTTGGAACAGCAGAGGCTCAGAAACTGGCTCTGAA...GCCGAGGAAGGCAAGAAGCGCAGGGGGTGGCCCGCGTGGCGTCGGTGGCCTCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
CDS-3UTR GCA 90 bp AAGAACCCGCTGGTCCAAGCTTTGAATGCAGGTGGCTGCGGCCAGCGCACTGGAGCCCGTTGGCGGCGCTaGCGTCCTCCGTCGTGCCGT +
Preference number: 4 (lower is better)
Translates to: KNPLVQALNAGGCGQRTGARWRR*RPPSCR
Trigger: ACGGCACGACGGAGGACGGCAGCGCCGCCAACGGGC...TCCAGTGCGCTGGCCGCAGCCACCTGCATTCAAAGCTTGGACCAGCGGGTTCTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
CDS-3UTR GCA 90 bp GGCTGCGAGCAGGAGCGGAGGCCACCGACGCCACGCGGGCCACCCCCTGCGCTTTCCATAGGGATGAGTTaGTCCAGGTCTTCCAAGCTG +
Preference number: 4 (lower is better)
Translates to: GCEQERRPPTPRGPPPALSIGMS*SRSSKL
Trigger: CAGCTTGGAAGACCTGGAGCAACTCATCCCTATGGA...AAGCGCAGGGGGTGGCCCGCGTGGCGTCGGTGGCCTCCGCTCCTGCTCGCAGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000450849.7
ENST00000597739.1
ENST00000600960.1
CDS-3UTR GCA 90 bp GGCTGCGAGCAGGAGCGGAGGCCACCGACGCCACGCGGGCCACCCCCTGCGCTTCCATGTCCTTTGTTATaGTCACGTCGCCTCAGGACA +
Preference number: 4 (lower is better)
Translates to: GCEQERRPPTPRGPPPALPCPLL*SRRLRT
Trigger: TGTCCTGAGGCGACGTGAGCATAACAAAGGACATGG...AAGCGCAGGGGGTGGCCCGCGTGGCGTCGGTGGCCTCCGCTCCTGCTCGCAGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000450849.7
ENST00000597739.1
ENST00000600960.1
CDS-3UTR GCA 90 bp GGCTGCGAGCAGGAGCGGAGGCCACCGACGCCACGCGGGCCACCCCCTGCGCTTTGGTTCCCAGGATTGTaGAAAGCAATTCCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: GCEQERRPPTPRGPPPALWFPGL*KAIPGW
Trigger: CCAGCCAGGAATTGCTTTGCACAATCCTGGGAACCA...AAGCGCAGGGGGTGGCCCGCGTGGCGTCGGTGGCCTCCGCTCCTGCTCGCAGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597739.1
CDS-3UTR CCA 90 bp TTCGCCTGCCTGTTGTCTGTGACTGCTGGTGATCCAAAGGGGCGTGGGTGGGCCTCACCCAGGGCGACGTaGCCAGCGCCCGCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: FACLLSVTAGDPKGRGWASPRAT*PAPASS
Trigger: AGAGCTGGCGGGCGCTGGCCACGTCGCCCTGGGTGA...GGCCCACCCACGCCCCTTTGGATCACCAGCAGTCACAGACAACAGGCAGGCGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR CCA 90 bp CCGAACAAGAACCCGCTGGTCCAAGCTTTGAATGCAGGTGGCTGCGGCCAGCGCCTGCCCGGGTGCAGCTaGGCATCGCTCACGCTCCCC +
Preference number: 4 (lower is better)
Translates to: PNKNPLVQALNAGGCGQRLPGCS*ASLTLP
Trigger: GGGGAGCGTGAGCGATGCCCAGCTGCACCCGGGCAG...GCGCTGGCCGCAGCCACCTGCATTCAAAGCTTGGACCAGCGGGTTCTTGTTCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR CCA 90 bp GATGATCACTGTCCGCCACAGGCGCCCGTTGGCGGCGCTGCCGTCCTCCGTCGTGGGGAGGCTGCTGTCTaGAAGGAAGCAGGCTGCGAA +
Preference number: 4 (lower is better)
Translates to: DDHCPPQAPVGGAAVLRRGEAAV*KEAGCE
Trigger: TTCGCAGCCTGCTTCCTTCCAGACAGCAGCCTCCCC...ACGACGGAGGACGGCAGCGCCGCCAACGGGCGCCTGTGGCGGACAGTGATCATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597739.1
CDS-3UTR CCA 90 bp CGGAGGCCACCGACGCCACGCGGGCCACCCCCTGCGCTTCTTGCCTTCCTCGGCACGCAGTCTGGGATCTaGACGTGTTCCATAGGGATG +
Preference number: 4 (lower is better)
Translates to: RRPPTPRGPPPALLAFLGTQSGI*TCSIGM
Trigger: CATCCCTATGGAACACGTCCAGATCCCAGACTGCGT...GCCGAGGAAGGCAAGAAGCGCAGGGGGTGGCCCGCGTGGCGTCGGTGGCCTCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000450849.7
ENST00000597739.1
ENST00000600960.1
CDS-3UTR CCA 90 bp GCAGGAGCGGAGGCCACCGACGCCACGCGGGCCACCCCCTGCGCTTCTTGCCTTGTGCCTTTGGTCACCTaGGACAAATCGTGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: AGAEATDATRATPCASCLVPLVT*DKSWQL
Trigger: CAGCTGCCACGATTTGTCCCAGGTGACCAAAGGCAC...AAGGCAAGAAGCGCAGGGGGTGGCCCGCGTGGCGTCGGTGGCCTCCGCTCCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR GCA 90 bp CCCCGGGCATGTTCTTGGCGGTGGCCACGGGGGTGTCGTCTTCCCACTCCAGTTCGCAGGGGCGGATTCTaGATCCGAGGAAGGTCACCC +
Preference number: 4 (lower is better)
Translates to: PRACSWRWPRGCRLPTPVRRGGF*IRGRSP
Trigger: GGGTGACCTTCCTCGGATGCAGAATCCGCCCCTGCG...AACTGGAGTGGGAAGACGACACCCCCGTGGCCACCGCCAAGAACATGCCCGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000597739.1
CDS-3UTR GCA 90 bp ACAGGCGCCCGTTGGCGGCGCTGCCGTCCTCCGTCGTGCCGTCCCCAAATAGATTGCCGTCCTCCGTCGTaGCGTCCCCAAATAGATCCG +
Preference number: 4 (lower is better)
Translates to: TGARWRRCRPPSCRPQIDCRPPS*RPQIDP
Trigger: CGGATCTATTTGGGGACGGCACGACGGAGGACGGCA...ATCTATTTGGGGACGGCACGACGGAGGACGGCAGCGCCGCCAACGGGCGCCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597739.1
CDS-3UTR GCA 90 bp CGGAGGCCACCGACGCCACGCGGGCCACCCCCTGCGCTTCTTGCCTTCCTCGGCCCATGTCCTTTGTTATaGTCACGTCGCCTCAGGACA +
Preference number: 4 (lower is better)
Translates to: RRPPTPRGPPPALLAFLGPCPLL*SRRLRT
Trigger: TGTCCTGAGGCGACGTGAGCATAACAAAGGACATGG...GCCGAGGAAGGCAAGAAGCGCAGGGGGTGGCCCGCGTGGCGTCGGTGGCCTCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000450849.7
ENST00000597739.1
ENST00000600960.1
CDS-3UTR CCA 90 bp ATGCTGAGACCCAGAGGTGTCCCGTCACAGCCGGTGGCTCCACAGGAACCTGCACCCCGGGCATGTTCTTaGCGGTGGCCACGGGGGTGT +
Preference number: 4 (lower is better)
Translates to: MLRPRGVPSQPVAPQEPAPRACS*RWPRGC
Trigger: ACACCCCCGTGGCCACCGCCAAGAACATGCCCGGGG...TGCAGGTTCCTGTGGAGCCACCGGCTGTGACGGGACACCTCTGGGTCTCAGCAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR CCA 90 bp GGCTGCGAGCAGGAGCGGAGGCCACCGACGCCACGCGGGCCACCCCCTGCGCTTACATATCTCATTCCTTaGTGGGAGGTATTGACGGGG +
Preference number: 4 (lower is better)
Translates to: GCEQERRPPTPRGPPPALTYLIP*WEVLTG
Trigger: CCCCGTCAATACCTCCCACCAAGGAATGAGATATGT...AAGCGCAGGGGGTGGCCCGCGTGGCGTCGGTGGCCTCCGCTCCTGCTCGCAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
CDS-3UTR TCA 90 bp GCAGGAGCGGAGGCCACCGACGCCACGCGGGCCACCCCCTGCGCTTCTTGCCTTACGAGGGGTGGACGATaGTCAAGGACTTCAGGTTTT +
Preference number: 4 (lower is better)
Translates to: AGAEATDATRATPCASCLTRGGR*SRTSGF
Trigger: AAAACCTGAAGTCCTTGATCATCGTCCACCCCTCGT...AAGGCAAGAAGCGCAGGGGGTGGCCCGCGTGGCGTCGGTGGCCTCCGCTCCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000450849.7
ENST00000597739.1
ENST00000600960.1
CDS-3UTR TCA 90 bp CCCCGGGCATGTTCTTGGCGGTGGCCACGGGGGTGTCGTCTTCCCACTCCAGTTCCAGCACAGTCCGAATaGACCACGAGGGGTGGACGA +
Preference number: 4 (lower is better)
Translates to: PRACSWRWPRGCRLPTPVPAQSE*TTRGGR
Trigger: TCGTCCACCCCTCGTGGTTCATTCGGACTGTGCTGG...AACTGGAGTGGGAAGACGACACCCCCGTGGCCACCGCCAAGAACATGCCCGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000597739.1
CDS-3UTR TCA 90 bp GATGATCACTGTCCGCCACAGGCGCCCGTTGGCGGCGCTGCCGTCCTCCGTCGTTCTTGTATCCAGCTCTaGCCACAGAGGCTGCGAGCA +
Preference number: 4 (lower is better)
Translates to: DDHCPPQAPVGGAAVLRRSCIQL*PQRLRA
Trigger: TGCTCGCAGCCTCTGTGGTCAGAGCTGGATACAAGA...ACGACGGAGGACGGCAGCGCCGCCAACGGGCGCCTGTGGCGGACAGTGATCATC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597739.1
CDS-3UTR TCA 90 bp AATAGATCCGCGCTGTCCCCGGGCATGTTCTTGGCGGTGGCCACGGGGGTGTCGCTTCTGGGAGTGGCCTaGCAGTTTCCAGCCTGCCCT +
Preference number: 4 (lower is better)
Translates to: NRSALSPGMFLAVATGVSLLGVA*QFPACP
Trigger: AGGGCAGGCTGGAAACTGTCAGGCCACTCCCAGAAG...CGACACCCCCGTGGCCACCGCCAAGAACATGCCCGGGGACAGCGCGGATCTATT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597739.1
CDS-3UTR GCA 90 bp ATGAACGGAGGGGCTGGCACCCTTGGAAGATTGGGACTCAGGATGAGGCAGGATTCATCGCCGCCCGCCTaGGCGCCCTGCCTCCGAGGT +
Preference number: 4 (lower is better)
Translates to: MNGGAGTLGRLGLRMRQDSSPPA*APCLRG
Trigger: ACCTCGGAGGCAGGGCGCGCAGGCGGGCGGCGATGA...ATCCTGCCTCATCCTGAGTCCCAATCTTCCAAGGGTGCCAGCCCCTCCGTTCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000597739.1
CDS-3UTR GCA 90 bp TTCCACTGGTGCCACCTCTGGCTTCTCTTCAGACCTGGGCAGCACAAACTCCGGCGAGCCCTGCCCGGGTaGAGCTGGGCATCGCTCACG +
Preference number: 4 (lower is better)
Translates to: FHWCHLWLLFRPGQHKLRRALPG*SWASLT
Trigger: CGTGAGCGATGCCCAGCTGCACCCGGGCAGGGCTCG...CCGGAGTTTGTGCTGCCCAGGTCTGAAGAGAAGCCAGAGGTGGCACCAGTGGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597739.1
CDS-3UTR GCA 90 bp GGCTGCGAGCAGGAGCGGAGGCCACCGACGCCACGCGGGCCACCCCCTGCGCTTATACCACCAGTTCCCTaGCATCATCGTTGGAATAAC +
Preference number: 4 (lower is better)
Translates to: GCEQERRPPTPRGPPPALIPPVP*HHRWNN
Trigger: GTTATTCCAACGATGATGGCAGGGAACTGGTGGTAT...AAGCGCAGGGGGTGGCCCGCGTGGCGTCGGTGGCCTCCGCTCCTGCTCGCAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR CCA 90 bp CCGAACAAGAACCCGCTGGTCCAAGCTTTGAATGCAGGTGGCTGCGGCCAGCGCAGCACAAACTCCGGCTaGGGCCTCGCGCTCTCCCTC +
Preference number: 4 (lower is better)
Translates to: PNKNPLVQALNAGGCGQRSTNSG*GLALSL
Trigger: GAGGGAGAGCGCGAGGCCCCAGCCGGAGTTTGTGCT...GCGCTGGCCGCAGCCACCTGCATTCAAAGCTTGGACCAGCGGGTTCTTGTTCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
CDS-3UTR CCA 90 bp TTCGCCTGCCTGTTGTCTGTGACTGCTGGTGATCCAAAGGGGCGTGGGTGGGCCGGCGGTGGGTGTCTGTaGCTCCAACCTGGAGCGGGT +
Preference number: 4 (lower is better)
Translates to: FACLLSVTAGDPKGRGWAGGGCL*LQPGAG
Trigger: ACCCGCTCCAGGTTGGAGCCACAGACACCCACCGCC...GGCCCACCCACGCCCCTTTGGATCACCAGCAGTCACAGACAACAGGCAGGCGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR CCA 90 bp AAGAACCCGCTGGTCCAAGCTTTGAATGCAGGTGGCTGCGGCCAGCGCACTGGAATGCCTGCCGACAGGTaGCCTCGCCGGGGGCCTCTT +
Preference number: 4 (lower is better)
Translates to: KNPLVQALNAGGCGQRTGMPADR*PRRGPL
Trigger: AAGAGGCCCCCGGCGAGGCCACCTGTCGGCAGGCAT...TCCAGTGCGCTGGCCGCAGCCACCTGCATTCAAAGCTTGGACCAGCGGGTTCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR CCA 90 bp GCAGGAGCGGAGGCCACCGACGCCACGCGGGCCACCCCCTGCGCTTCTTGCCTTTTCCAGCCTGCCCTGTaGATTTTGGACTTGGTGGTT +
Preference number: 4 (lower is better)
Translates to: AGAEATDATRATPCASCLFQPAL*ILDLVV
Trigger: AACCACCAAGTCCAAAATCCACAGGGCAGGCTGGAA...AAGGCAAGAAGCGCAGGGGGTGGCCCGCGTGGCGTCGGTGGCCTCCGCTCCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000597739.1
CDS-3UTR TCA 90 bp ATGCTGAGACCCAGAGGTGTCCCGTCACAGCCGGTGGCTCCACAGGAACCTGCACAGGATGAGGCAGGATaGGATCTGGGGCCAGTGGGC +
Preference number: 4 (lower is better)
Translates to: MLRPRGVPSQPVAPQEPAQDEAG*DLGPVG
Trigger: GCCCACTGGCCCCAGATCTCATCCTGCCTCATCCTG...TGCAGGTTCCTGTGGAGCCACCGGCTGTGACGGGACACCTCTGGGTCTCAGCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR GCA 90 bp CCGAACAAGAACCCGCTGGTCCAAGCTTTGAATGCAGGTGGCTGCGGCCAGCGCTCTGACCACAGAGGCTaGGAGCAGGAGCGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: PNKNPLVQALNAGGCGQRSDHRG*EQERRP
Trigger: TGGCCTCCGCTCCTGCTCGCAGCCTCTGTGGTCAGA...GCGCTGGCCGCAGCCACCTGCATTCAAAGCTTGGACCAGCGGGTTCTTGTTCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
CDS-3UTR CCA 90 bp TTCCACTGGTGCCACCTCTGGCTTCTCTTCAGACCTGGGCAGCACAAACTCCGGCCCCGGGCATGTTCTTaGCGGTGGCCACGGGGGTGT +
Preference number: 4 (lower is better)
Translates to: FHWCHLWLLFRPGQHKLRPRACS*RWPRGC
Trigger: ACACCCCCGTGGCCACCGCCAAGAACATGCCCGGGG...CCGGAGTTTGTGCTGCCCAGGTCTGAAGAGAAGCCAGAGGTGGCACCAGTGGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597739.1
CDS-3UTR CCA 90 bp CTGACGCTGGGTTGGGGGAGCAGTGAGGTCCACATATCTCATTCCTTGGTGGGAAGGTCGTGGCCCAGCTaGGAACGGTGGCCCCGGCTG +
Preference number: 4 (lower is better)
Translates to: LTLGWGSSEVHISHSLVGRSWPS*ERWPRL
Trigger: CAGCCGGGGCCACCGTTCCCAGCTGGGCCACGACCT...TCCCACCAAGGAATGAGATATGTGGACCTCACTGCTCCCCCAACCCAGCGTCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR TCA 90 bp GACCTCGGCATGCCTGCCGACAGGTGGCCTCGCCGGGGGCCTCTTTTGCTCTGGAGGGACCCCTCACTCTaGTCCAGAGAAATGTTGATC +
Preference number: 4 (lower is better)
Translates to: DLGMPADRWPRRGPLLLWRDPSL*SREMLI
Trigger: GATCAACATTTCTCTGGATCAGAGTGAGGGGTCCCT...CCAGAGCAAAAGAGGCCCCCGGCGAGGCCACCTGTCGGCAGGCATGCCGAGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR TCA 90 bp AATAGATCCGCGCTGTCCCCGGGCATGTTCTTGGCGGTGGCCACGGGGGTGTCGAGTACCCTCCGTGGGTaGCCACTTTCATGTAAGGCC +
Preference number: 4 (lower is better)
Translates to: NRSALSPGMFLAVATGVSSTLRG*PLSCKA
Trigger: GGCCTTACATGAAAGTGGTCACCCACGGAGGGTACT...CGACACCCCCGTGGCCACCGCCAAGAACATGCCCGGGGACAGCGCGGATCTATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597739.1
CDS-3UTR TCA 90 bp GGTGGGGGCAGAATGTTTAGCCGGCAGGCACCTTCTGGGTCAGGTAGGGCCTCACCAGCACAGTCCGAATaGACCACGAGGGGTGGACGA +
Preference number: 4 (lower is better)
Translates to: GGGRMFSRQAPSGSGRASPAQSE*TTRGGR
Trigger: TCGTCCACCCCTCGTGGTTCATTCGGACTGTGCTGG...TGAGGCCCTACCTGACCCAGAAGGTGCCTGCCGGCTAAACATTCTGCCCCCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR TCA 90 bp CCGAACAAGAACCCGCTGGTCCAAGCTTTGAATGCAGGTGGCTGCGGCCAGCGCCCAGCACAGTCCGAATaGACCACGAGGGGTGGACGA +
Preference number: 4 (lower is better)
Translates to: PNKNPLVQALNAGGCGQRPAQSE*TTRGGR
Trigger: TCGTCCACCCCTCGTGGTTCATTCGGACTGTGCTGG...GCGCTGGCCGCAGCCACCTGCATTCAAAGCTTGGACCAGCGGGTTCTTGTTCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
CDS-3UTR TCA 90 bp CCGGGCATGTTCTTGGCGGTGGCCACGGGGGTGTCGTCTTCCCACTCCAGTTCGCTTGCCTTCCTCGGCTaGGAGTTCGTGAGTGTGGAA +
Preference number: 4 (lower is better)
Translates to: PGMFLAVATGVSSSHSSSLAFLG*EFVSVE
Trigger: TTCCACACTCACGAACTCTCAGCCGAGGAAGGCAAG...CGAACTGGAGTGGGAAGACGACACCCCCGTGGCCACCGCCAAGAACATGCCCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597739.1
CDS-3UTR TCA 90 bp GTCTTCCTCATGGCAGGAGCTGCTGGCTTTTGGGGATGGGACTCGCGCAGGACCAGCTGGGTGTCATTATaGGCGAGAAGGGGGCGGGTC +
Preference number: 4 (lower is better)
Translates to: VFLMAGAAGFWGWDSRRTSWVSL*ARRGRV
Trigger: GACCCGCCCCCTTCTCGCTCATAATGACACCCAGCT...GGTCCTGCGCGAGTCCCATCCCCAAAAGCCAGCAGCTCCTGCCATGAGGAAGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR TCA 90 bp AAGAACCCGCTGGTCCAAGCTTTGAATGCAGGTGGCTGCGGCCAGCGCACTGGATCCCCAGGGCAATGCTaGGACCCAGAGGTGTCCCGT +
Preference number: 4 (lower is better)
Translates to: KNPLVQALNAGGCGQRTGSPGQC*DPEVSR
Trigger: ACGGGACACCTCTGGGTCTCAGCATTGCCCTGGGGA...TCCAGTGCGCTGGCCGCAGCCACCTGCATTCAAAGCTTGGACCAGCGGGTTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR TCA 90 bp AAGAACCCGCTGGTCCAAGCTTTGAATGCAGGTGGCTGCGGCCAGCGCACTGGACCCGTCTCCTGTCTGTaGCTTGGAAGCGGCCCCAGT +
Preference number: 4 (lower is better)
Translates to: KNPLVQALNAGGCGQRTGPVSCL*LGSGPS
Trigger: ACTGGGGCCGCTTCCAAGTCACAGACAGGAGACGGG...TCCAGTGCGCTGGCCGCAGCCACCTGCATTCAAAGCTTGGACCAGCGGGTTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR TCA 90 bp GTCTTCCTCATGGCAGGAGCTGCTGGCTTTTGGGGATGGGACTCGCGCAGGACCGTCTGTGACTGCTGGTaGTCCAAAGGGGCGTGGGTG +
Preference number: 4 (lower is better)
Translates to: VFLMAGAAGFWGWDSRRTVCDCW*SKGAWV
Trigger: CACCCACGCCCCTTTGGATCACCAGCAGTCACAGAC...GGTCCTGCGCGAGTCCCATCCCCAAAAGCCAGCAGCTCCTGCCATGAGGAAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR GCA 90 bp CTGACGCTGGGTTGGGGGAGCAGTGAGGTCCACATATCTCATTCCTTGGTGGGAACGCGGGCCACCCCCTaGGCTTCTTGCCTTCCTCGG +
Preference number: 4 (lower is better)
Translates to: LTLGWGSSEVHISHSLVGTRATP*ASCLPR
Trigger: CCGAGGAAGGCAAGAAGCGCAGGGGGTGGCCCGCGT...TCCCACCAAGGAATGAGATATGTGGACCTCACTGCTCCCCCAACCCAGCGTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
CDS-3UTR GCA 90 bp TTCGCCTGCCTGTTGTCTGTGACTGCTGGTGATCCAAAGGGGCGTGGGTGGGCCTGTTTGACCTCGGCATaGCTGCCGACAGGTGGCCTC +
Preference number: 4 (lower is better)
Translates to: FACLLSVTAGDPKGRGWACLTSA*LPTGGL
Trigger: GAGGCCACCTGTCGGCAGGCATGCCGAGGTCAAACA...GGCCCACCCACGCCCCTTTGGATCACCAGCAGTCACAGACAACAGGCAGGCGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR CCA 90 bp GACCTCGGCATGCCTGCCGACAGGTGGCCTCGCCGGGGGCCTCTTTTGCTCTGGAGAAATGTTGATCTCTaGGGCCACCAGCGTCTTCCT +
Preference number: 4 (lower is better)
Translates to: DLGMPADRWPRRGPLLLWRNVDL*GHQRLP
Trigger: AGGAAGACGCTGGTGGCCCCAGAGATCAACATTTCT...CCAGAGCAAAAGAGGCCCCCGGCGAGGCCACCTGTCGGCAGGCATGCCGAGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR CCA 90 bp GCAGGAGCGGAGGCCACCGACGCCACGCGGGCCACCCCCTGCGCTTCTTGCCTTTATCTCATTCCTTGGTaGGAGGTATTGACGGGGTTT +
Preference number: 4 (lower is better)
Translates to: AGAEATDATRATPCASCLYLIPW*EVLTGF
Trigger: AAACCCCGTCAATACCTCCCACCAAGGAATGAGATA...AAGGCAAGAAGCGCAGGGGGTGGCCCGCGTGGCGTCGGTGGCCTCCGCTCCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
CDS-3UTR CCA 90 bp AAGAACCCGCTGGTCCAAGCTTTGAATGCAGGTGGCTGCGGCCAGCGCACTGGAGCAGCTGGGCCTGGCTaGCATCTATCTGCTGGAGCC +
Preference number: 4 (lower is better)
Translates to: KNPLVQALNAGGCGQRTGAAGPG*HLSAGA
Trigger: GGCTCCAGCAGATAGATGCCAGCCAGGCCCAGCTGC...TCCAGTGCGCTGGCCGCAGCCACCTGCATTCAAAGCTTGGACCAGCGGGTTCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450849.7
3UTR CAA 72 bp AAACCCCGTCTTCCTCATGGCAGGAGCTGCTGGCTTTaGGGGATGGGACTCGCGCAGGACCCTGTCCCACAG +
Preference number: 4 (lower is better)
Translates to: KPRLPHGRSCWL*GMGLAQDPVPQ
Trigger: CTGTGGGACAGGGTCCTGCGCGAGTCCCATCCCCAAAAGCCAGCAGCTCCTGCCATGAGGAAGACGGGGTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450849.7
3UTR CAA 72 bp GTGGCCACGGGGGTGTCGTCTTCCCACTCCAGTTCGTaGCCATTCCCCAGGAACTCCAGCGAGTCGGTCTCA +
Preference number: 4 (lower is better)
Translates to: VATGVSSSHSSS*PFPRNSSESVS
Trigger: TGAGACCGACTCGCTGGAGTTCCTGGGGAATGGCAACGAACTGGAGTGGGAAGACGACACCCCCGTGGCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597739.1
CDS-3UTR TCA 90 bp CTGATACAAATCCATCTCAAAGCCCATCTGTGGACGGTGCAGGTCGTGGCCCAGGTGGCCCCGGCTGTTTaGCCTCGGCATGCCTGCCGA +
Preference number: 4 (lower is better)
Translates to: LIQIHLKAHLWTVQVVAQVAPAV*PRHACR
Trigger: TCGGCAGGCATGCCGAGGTCAAACAGCCGGGGCCAC...CTGGGCCACGACCTGCACCGTCCACAGATGGGCTTTGAGATGGATTTGTATCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR GCA 90 bp GTCCGATTGGGTGGAATGAGTTCTTTCCTGTCCCCGTCTCCTGTCTGTGACTTGCGAGCCCTGCCCGGGTaGAGCTGGGCATCGCTCACG +
Preference number: 4 (lower is better)
Translates to: VRLGGMSSFLSPSPVCDLRALPG*SWASLT
Trigger: CGTGAGCGATGCCCAGCTGCACCCGGGCAGGGCTCG...CAAGTCACAGACAGGAGACGGGGACAGGAAAGAACTCATTCCACCCAATCGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR GCA 90 bp ACCCAGCCACTTTTGTCATCTTGTGTTGGCTTTGGCAGCGACACCATTCACTGGGCCCGTTGGCGGCGCTaGCGTCCTCCGTCGTGCCGT +
Preference number: 4 (lower is better)
Translates to: TQPLLSSCVGFGSDTIHWARWRR*RPPSCR
Trigger: ACGGCACGACGGAGGACGGCAGCGCCGCCAACGGGC...CCAGTGAATGGTGTCGCTGCCAAAGCCAACACAAGATGACAAAAGTGGCTGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR GCA 90 bp GCAGGAGCGGAGGCCACCGACGCCACGCGGGCCACCCCCTGCGCTTCTTGCCTTATCTTTCTGTATCACTaGCCCTCAGCACTAAATACC +
Preference number: 4 (lower is better)
Translates to: AGAEATDATRATPCASCLIFLYH*PSALNT
Trigger: GGTATTTAGTGCTGAGGGGCAGTGATACAGAAAGAT...AAGGCAAGAAGCGCAGGGGGTGGCCCGCGTGGCGTCGGTGGCCTCCGCTCCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR GCA 90 bp GGATGCTGGGTTTCAGAGATGAACGGAGGGGCTGGCACCCTTGGAAGATTGGGACCCATCTGTGGACGGTaGAGGTCGTGGCCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: GCWVSEMNGGAGTLGRLGPICGR*RSWPSW
Trigger: CCAGCTGGGCCACGACCTGCACCGTCCACAGATGGG...TCCCAATCTTCCAAGGGTGCCAGCCCCTCCGTTCATCTCTGAAACCCAGCATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR CCA 90 bp AGGTCTATACGGTGCTCTTGCTCCCCGATGATCACTGTCCGCCACAGGCGCCCGGCTGGGAAGAGGCACTaGCTTGAAGCAGGGATGACC +
Preference number: 4 (lower is better)
Translates to: RSIRCSCSPMITVRHRRPAGKRH*LEAGMT
Trigger: GGTCATCCCTGCTTCAAGCCAGTGCCTCTTCCCAGC...CGGGCGCCTGTGGCGGACAGTGATCATCGGGGAGCAAGAGCACCGTATAGACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597739.1
CDS-3UTR CCA 90 bp CCGAACAAGAACCCGCTGGTCCAAGCTTTGAATGCAGGTGGCTGCGGCCAGCGCCTTCTGGGAGTGGCCTaGGAAGATCTTCGTCCTGCC +
Preference number: 4 (lower is better)
Translates to: PNKNPLVQALNAGGCGQRLLGVA*EDLRPA
Trigger: GGCAGGACGAAGATCTTCCCAGGCCACTCCCAGAAG...GCGCTGGCCGCAGCCACCTGCATTCAAAGCTTGGACCAGCGGGTTCTTGTTCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
CDS-3UTR CCA 90 bp GCGAGAGATGGCCAGCACAGTCCGAATGAACCACGAGGGGTGGACGATGATCAATCCTCCGCCGGGGCGTaGCACCGTTCAGGTACACGA +
Preference number: 4 (lower is better)
Translates to: ARDGQHSPNEPRGVDDDQSSAGA*HRSGTR
Trigger: TCGTGTACCTGAACGGTGCCACGCCCCGGCGGAGGA...TTGATCATCGTCCACCCCTCGTGGTTCATTCGGACTGTGCTGGCCATCTCTCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597739.1
CDS-3UTR CCA 90 bp GCGTGGCACCGTTCAGGTACACGATCATGTAGTCCTCAGCCACCAGGAGCTCTAAGCACAAACTCCGGCTaGGGCCTCGCGCTCTCCCTC +
Preference number: 4 (lower is better)
Translates to: AWHRSGTRSCSPQPPGALSTNSG*GLALSL
Trigger: GAGGGAGAGCGCGAGGCCCCAGCCGGAGTTTGTGCT...TAGAGCTCCTGGTGGCTGAGGACTACATGATCGTGTACCTGAACGGTGCCACGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597739.1
CDS-3UTR CCA 90 bp CTGACGCTGGGTTGGGGGAGCAGTGAGGTCCACATATCTCATTCCTTGGTGGGAGGCGGTGGGTGTCTGTaGCTCCAACCTGGAGCGGGT +
Preference number: 4 (lower is better)
Translates to: LTLGWGSSEVHISHSLVGGGGCL*LQPGAG
Trigger: ACCCGCTCCAGGTTGGAGCCACAGACACCCACCGCC...TCCCACCAAGGAATGAGATATGTGGACCTCACTGCTCCCCCAACCCAGCGTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
CDS-3UTR CCA 90 bp GGTGGGGGCAGAATGTTTAGCCGGCAGGCACCTTCTGGGTCAGGTAGGGCCTCACATGGCAGGAGCTGCTaGCTTTTGGGGATGGGACTC +
Preference number: 4 (lower is better)
Translates to: GGGRMFSRQAPSGSGRASHGRSC*LLGMGL
Trigger: GAGTCCCATCCCCAAAAGCCAGCAGCTCCTGCCATG...TGAGGCCCTACCTGACCCAGAAGGTGCCTGCCGGCTAAACATTCTGCCCCCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR CCA 90 bp AATAGATCCGCGCTGTCCCCGGGCATGTTCTTGGCGGTGGCCACGGGGGTGTCGCTGCCCTGTGGATTTTaGACTTGGTGGTTCCCAGGA +
Preference number: 4 (lower is better)
Translates to: NRSALSPGMFLAVATGVSLPCGF*TWWFPG
Trigger: TCCTGGGAACCACCAAGTCCAAAATCCACAGGGCAG...CGACACCCCCGTGGCCACCGCCAAGAACATGCCCGGGGACAGCGCGGATCTATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000597739.1
3UTR CAA 72 bp GTAAGGCCGGATCATGTGCAGGTCTATACGGTGCTCTaGCTCCCCGATGATCACTGTCCGCCACAGGCGCCC +
Preference number: 4 (lower is better)
Translates to: VRPDHVQVYTVL*LPDDHCPPQAP
Trigger: GGGCGCCTGTGGCGGACAGTGATCATCGGGGAGCAAGAGCACCGTATAGACCTGCACATGATCCGGCCTTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597739.1
CDS-3UTR TCA 90 bp CCGGGCATGTTCTTGGCGGTGGCCACGGGGGTGTCGTCTTCCCACTCCAGTTCGACGAGGGGTGGACGATaGTCAAGGACTTCAGGTTTT +
Preference number: 4 (lower is better)
Translates to: PGMFLAVATGVSSSHSSSTRGGR*SRTSGF
Trigger: AAAACCTGAAGTCCTTGATCATCGTCCACCCCTCGT...CGAACTGGAGTGGGAAGACGACACCCCCGTGGCCACCGCCAAGAACATGCCCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597739.1
CDS-3UTR TCA 90 bp ACAGGCGCCCGTTGGCGGCGCTGCCGTCCTCCGTCGTGCCGTCCCCAAATAGATGACATGCTTGTTTCCTaGTCTTCTGAGACCAGAGCA +
Preference number: 4 (lower is better)
Translates to: TGARWRRCRPPSCRPQIDDMLVS*SSETRA
Trigger: TGCTCTGGTCTCAGAAGATCAGGAAACAAGCATGTC...ATCTATTTGGGGACGGCACGACGGAGGACGGCAGCGCCGCCAACGGGCGCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597739.1
CDS-3UTR TCA 90 bp CGAGAGATGGCCAGCACAGTCCGAATGAACCACGAGGGGTGGACGATGATCAAGGCTGGGTTTCAGAGATaGACGGAGGGGCTGGCACCC +
Preference number: 4 (lower is better)
Translates to: REMASTVRMNHEGWTMIKAGFQR*TEGLAP
Trigger: GGGTGCCAGCCCCTCCGTTCATCTCTGAAACCCAGC...CTTGATCATCGTCCACCCCTCGTGGTTCATTCGGACTGTGCTGGCCATCTCTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597739.1
CDS-3UTR TCA 90 bp TTCGCCTGCCTGTTGTCTGTGACTGCTGGTGATCCAAAGGGGCGTGGGTGGGCCCTTGCCTTCCTCGGCTaGGAGTTCGTGAGTGTGGAA +
Preference number: 4 (lower is better)
Translates to: FACLLSVTAGDPKGRGWALAFLG*EFVSVE
Trigger: TTCCACACTCACGAACTCTCAGCCGAGGAAGGCAAG...GGCCCACCCACGCCCCTTTGGATCACCAGCAGTCACAGACAACAGGCAGGCGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR TCA 90 bp CCGAACAAGAACCCGCTGGTCCAAGCTTTGAATGCAGGTGGCTGCGGCCAGCGCGGGTTGGGGGAGCAGTaGGGTCCACATATCTCATTC +
Preference number: 4 (lower is better)
Translates to: PNKNPLVQALNAGGCGQRGLGEQ*GPHISF
Trigger: GAATGAGATATGTGGACCTCACTGCTCCCCCAACCC...GCGCTGGCCGCAGCCACCTGCATTCAAAGCTTGGACCAGCGGGTTCTTGTTCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
CDS-3UTR GCA 90 bp AAGAACCCGCTGGTCCAAGCTTTGAATGCAGGTGGCTGCGGCCAGCGCACTGGACTAGGAGGAAGAGGATaGTCGCAGGGGCGGATTCTG +
Preference number: 4 (lower is better)
Translates to: KNPLVQALNAGGCGQRTGLGGRG*SQGRIL
Trigger: CAGAATCCGCCCCTGCGAGCATCCTCTTCCTCCTAG...TCCAGTGCGCTGGCCGCAGCCACCTGCATTCAAAGCTTGGACCAGCGGGTTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR GCA 90 bp TTCGCCTGCCTGTTGTCTGTGACTGCTGGTGATCCAAAGGGGCGTGGGTGGGCCCCCACTCCAGTTCGTTaGCATTCCCCAGGAACTCCA +
Preference number: 4 (lower is better)
Translates to: FACLLSVTAGDPKGRGWAPTPVR*HSPGTP
Trigger: TGGAGTTCCTGGGGAATGGCAACGAACTGGAGTGGG...GGCCCACCCACGCCCCTTTGGATCACCAGCAGTCACAGACAACAGGCAGGCGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR GCA 90 bp CCGAACAAGAACCCGCTGGTCCAAGCTTTGAATGCAGGTGGCTGCGGCCAGCGCTTGAATGCAGGTGGCTaGGGCCAGCGCACTGGATTT +
Preference number: 4 (lower is better)
Translates to: PNKNPLVQALNAGGCGQRLNAGG*GQRTGF
Trigger: AAATCCAGTGCGCTGGCCGCAGCCACCTGCATTCAA...GCGCTGGCCGCAGCCACCTGCATTCAAAGCTTGGACCAGCGGGTTCTTGTTCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
CDS-3UTR GCA 90 bp AAGAACCCGCTGGTCCAAGCTTTGAATGCAGGTGGCTGCGGCCAGCGCACTGGAAGGCGTGAGCCATCGTaGCTGGCCCAGCCTTTTCTT +
Preference number: 4 (lower is better)
Translates to: KNPLVQALNAGGCGQRTGRREPS*LAQPFL
Trigger: AAGAAAAGGCTGGGCCAGGCACGATGGCTCACGCCT...TCCAGTGCGCTGGCCGCAGCCACCTGCATTCAAAGCTTGGACCAGCGGGTTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
CDS-3UTR CCA 90 bp CCGAACAAGAACCCGCTGGTCCAAGCTTTGAATGCAGGTGGCTGCGGCCAGCGCGCTTCTCTTCAGACCTaGGCAGCACAAACTCCGGCT +
Preference number: 4 (lower is better)
Translates to: PNKNPLVQALNAGGCGQRASLQT*AAQTPA
Trigger: AGCCGGAGTTTGTGCTGCCCAGGTCTGAAGAGAAGC...GCGCTGGCCGCAGCCACCTGCATTCAAAGCTTGGACCAGCGGGTTCTTGTTCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
CDS-3UTR CCA 90 bp CCGAACAAGAACCCGCTGGTCCAAGCTTTGAATGCAGGTGGCTGCGGCCAGCGCGCAGTGGCACGATCTTaGCTCACTGTAACCTCTGCC +
Preference number: 4 (lower is better)
Translates to: PNKNPLVQALNAGGCGQRAVARS*LTVTSA
Trigger: GGCAGAGGTTACAGTGAGCCAAGATCGTGCCACTGC...GCGCTGGCCGCAGCCACCTGCATTCAAAGCTTGGACCAGCGGGTTCTTGTTCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
CDS-3UTR CCA 90 bp CTGACGCTGGGTTGGGGGAGCAGTGAGGTCCACATATCTCATTCCTTGGTGGGAGGAGCTGCTGGCTTTTaGGGATGGGACTCGCGCAGG +
Preference number: 4 (lower is better)
Translates to: LTLGWGSSEVHISHSLVGGAAGF*GWDSRR
Trigger: CCTGCGCGAGTCCCATCCCCAAAAGCCAGCAGCTCC...TCCCACCAAGGAATGAGATATGTGGACCTCACTGCTCCCCCAACCCAGCGTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR CCA 90 bp CTGATACAAATCCATCTCAAAGCCCATCTGTGGACGGTGCAGGTCGTGGCCCAGCCCAGCTGGGAACGGTaGCCCCGGCTGTTTGACCTC +
Preference number: 4 (lower is better)
Translates to: LIQIHLKAHLWTVQVVAQPSWER*PRLFDL
Trigger: GAGGTCAAACAGCCGGGGCCACCGTTCCCAGCTGGG...CTGGGCCACGACCTGCACCGTCCACAGATGGGCTTTGAGATGGATTTGTATCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR TCA 90 bp AAGAACCCGCTGGTCCAAGCTTTGAATGCAGGTGGCTGCGGCCAGCGCACTGGAAGTACCCTCCGTGGGTaGCCACTTTCATGTAAGGCC +
Preference number: 4 (lower is better)
Translates to: KNPLVQALNAGGCGQRTGSTLRG*PLSCKA
Trigger: GGCCTTACATGAAAGTGGTCACCCACGGAGGGTACT...TCCAGTGCGCTGGCCGCAGCCACCTGCATTCAAAGCTTGGACCAGCGGGTTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
CDS-3UTR TCA 90 bp ATGCTGAGACCCAGAGGTGTCCCGTCACAGCCGGTGGCTCCACAGGAACCTGCAGGAAGAGGTTCTCCATaGTGTAGTGGTAGTCGGGGA +
Preference number: 4 (lower is better)
Translates to: MLRPRGVPSQPVAPQEPAGRGSP*CSGSRG
Trigger: TCCCCGACTACCACTACATCATGGAGAACCTCTTCC...TGCAGGTTCCTGTGGAGCCACCGGCTGTGACGGGACACCTCTGGGTCTCAGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR TCA 90 bp ATGAACGGAGGGGCTGGCACCCTTGGAAGATTGGGACTCAGGATGAGGCAGGATGGGCCAGTGGGCGTCTaGCAGAGGTTTTCTGGCATC +
Preference number: 4 (lower is better)
Translates to: MNGGAGTLGRLGLRMRQDGPVGV*QRFSGI
Trigger: GATGCCAGAAAACCTCTGTCAGACGCCCACTGGCCC...ATCCTGCCTCATCCTGAGTCCCAATCTTCCAAGGGTGCCAGCCCCTCCGTTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000450849.7
ENST00000597739.1
ENST00000600960.1
CDS-3UTR TCA 90 bp AAGCAGCTGAAAAGGATGCTGGGTTTCAGAGATGAACGGAGGGGCTGGCACCCTCAGGATGAGGCAGGATaGGATCTGGGGCCAGTGGGC +
Preference number: 4 (lower is better)
Translates to: KQLKRMLGFRDERRGWHPQDEAG*DLGPVG
Trigger: GCCCACTGGCCCCAGATCTCATCCTGCCTCATCCTG...AGGGTGCCAGCCCCTCCGTTCATCTCTGAAACCCAGCATCCTTTTCAGCTGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000450849.7
ENST00000597739.1
ENST00000600960.1
CDS-3UTR TCA 90 bp CTGATACAAATCCATCTCAAAGCCCATCTGTGGACGGTGCAGGTCGTGGCCCAGCTTGGTGGGAGGTATTaGCGGGGTTTGCCCGGTGGC +
Preference number: 4 (lower is better)
Translates to: LIQIHLKAHLWTVQVVAQLGGRY*RGLPGG
Trigger: GCCACCGGGCAAACCCCGTCAATACCTCCCACCAAG...CTGGGCCACGACCTGCACCGTCCACAGATGGGCTTTGAGATGGATTTGTATCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR TCA 90 bp GGATGCTGGGTTTCAGAGATGAACGGAGGGGCTGGCACCCTTGGAAGATTGGGAAGGGTCCGCTGGGGCTaGGTTGGGGTCTTCAGTTTC +
Preference number: 4 (lower is better)
Translates to: GCWVSEMNGGAGTLGRLGRVRWG*VGVFSF
Trigger: GAAACTGAAGACCCCAACTCAGCCCCAGCGGACCCT...TCCCAATCTTCCAAGGGTGCCAGCCCCTCCGTTCATCTCTGAAACCCAGCATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR GCA 90 bp GATGAGTTGCTCCAGGTCTTCCAAGCTGTGCACGTACTGGATCTTGTTGATGAATCATCGCCGCCCGCCTaGGCGCCCTGCCTCCGAGGT +
Preference number: 4 (lower is better)
Translates to: DELLQVFQAVHVLDLVDESSPPA*APCLRG
Trigger: ACCTCGGAGGCAGGGCGCGCAGGCGGGCGGCGATGA...TTCATCAACAAGATCCAGTACGTGCACAGCTTGGAAGACCTGGAGCAACTCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597739.1
CDS-3UTR GCA 90 bp CCGAACAAGAACCCGCTGGTCCAAGCTTTGAATGCAGGTGGCTGCGGCCAGCGCTGCAGGTCTATACGGTaGTCTTGCTCCCCGATGATC +
Preference number: 4 (lower is better)
Translates to: PNKNPLVQALNAGGCGQRCRSIR*SCSPMI
Trigger: GATCATCGGGGAGCAAGAGCACCGTATAGACCTGCA...GCGCTGGCCGCAGCCACCTGCATTCAAAGCTTGGACCAGCGGGTTCTTGTTCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
CDS-3UTR GCA 90 bp CTGGGTGTCATTATGAGCGAGAAGGGGGCGGGTCAAATGAAAAACCATGGGTGTACGCGGGCCACCCCCTaGGCTTCTTGCCTTCCTCGG +
Preference number: 4 (lower is better)
Translates to: LGVIMSEKGAGQMKNHGCTRATP*ASCLPR
Trigger: CCGAGGAAGGCAAGAAGCGCAGGGGGTGGCCCGCGT...ACACCCATGGTTTTTCATTTGACCCGCCCCCTTCTCGCTCATAATGACACCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
CDS-3UTR GCA 90 bp AAGCAGCTGAAAAGGATGCTGGGTTTCAGAGATGAACGGAGGGGCTGGCACCCTTCTGACCACAGAGGCTaGGAGCAGGAGCGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: KQLKRMLGFRDERRGWHPSDHRG*EQERRP
Trigger: TGGCCTCCGCTCCTGCTCGCAGCCTCTGTGGTCAGA...AGGGTGCCAGCCCCTCCGTTCATCTCTGAAACCCAGCATCCTTTTCAGCTGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000450849.7
ENST00000597739.1
ENST00000600960.1
CDS-3UTR GCA 90 bp ATGAACGGAGGGGCTGGCACCCTTGGAAGATTGGGACTCAGGATGAGGCAGGATAGGGCCTGGAGAATGTaGCCGCCCTACTCACCGTCT +
Preference number: 4 (lower is better)
Translates to: MNGGAGTLGRLGLRMRQDRAWRM*PPYSPS
Trigger: AGACGGTGAGTAGGGCGGGCACATTCTCCAGGCCCT...ATCCTGCCTCATCCTGAGTCCCAATCTTCCAAGGGTGCCAGCCCCTCCGTTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR GCA 90 bp GTCTTCCTCATGGCAGGAGCTGCTGGCTTTTGGGGATGGGACTCGCGCAGGACCGCTGACTGCAATCTCTaGCTCCTGGGTTCCAGCTAT +
Preference number: 4 (lower is better)
Translates to: VFLMAGAAGFWGWDSRRTADCNL*LLGSSY
Trigger: ATAGCTGGAACCCAGGAGGCAGAGATTGCAGTCAGC...GGTCCTGCGCGAGTCCCATCCCCAAAAGCCAGCAGCTCCTGCCATGAGGAAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR CCA 90 bp AAGAACCCGCTGGTCCAAGCTTTGAATGCAGGTGGCTGCGGCCAGCGCACTGGACGTCTCTTCTGGGAGTaGCCTGGGAAGATCTTCGTC +
Preference number: 4 (lower is better)
Translates to: KNPLVQALNAGGCGQRTGRLFWE*PGKIFV
Trigger: GACGAAGATCTTCCCAGGCCACTCCCAGAAGAGACG...TCCAGTGCGCTGGCCGCAGCCACCTGCATTCAAAGCTTGGACCAGCGGGTTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
CDS-3UTR CCA 90 bp GGATGCTGGGTTTCAGAGATGAACGGAGGGGCTGGCACCCTTGGAAGATTGGGAGCATGTTCTTGGCGGTaGCCACGGGGGTGTCGTCTT +
Preference number: 4 (lower is better)
Translates to: GCWVSEMNGGAGTLGRLGACSWR*PRGCRL
Trigger: AAGACGACACCCCCGTGGCCACCGCCAAGAACATGC...TCCCAATCTTCCAAGGGTGCCAGCCCCTCCGTTCATCTCTGAAACCCAGCATCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000450849.7
ENST00000597739.1
ENST00000600960.1
CDS-3UTR CCA 90 bp AGGTCTATACGGTGCTCTTGCTCCCCGATGATCACTGTCCGCCACAGGCGCCCGACGCAGTCTGGGATCTaGACGTGTTCCATAGGGATG +
Preference number: 4 (lower is better)
Translates to: RSIRCSCSPMITVRHRRPTQSGI*TCSIGM
Trigger: CATCCCTATGGAACACGTCCAGATCCCAGACTGCGT...CGGGCGCCTGTGGCGGACAGTGATCATCGGGGAGCAAGAGCACCGTATAGACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597739.1
CDS-3UTR CCA 90 bp ATGAACGGAGGGGCTGGCACCCTTGGAAGATTGGGACTCAGGATGAGGCAGGATAGCTTTGAATGCAGGTaGCTGCGGCCAGCGCACTGG +
Preference number: 4 (lower is better)
Translates to: MNGGAGTLGRLGLRMRQDSFECR*LRPAHW
Trigger: CCAGTGCGCTGGCCGCAGCCACCTGCATTCAAAGCT...ATCCTGCCTCATCCTGAGTCCCAATCTTCCAAGGGTGCCAGCCCCTCCGTTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
CDS-3UTR CCA 90 bp CTGACGCTGGGTTGGGGGAGCAGTGAGGTCCACATATCTCATTCCTTGGTGGGACCGCTGGGGCTGAGTTaGGGTCTTCAGTTTCGCCTG +
Preference number: 4 (lower is better)
Translates to: LTLGWGSSEVHISHSLVGPLGLS*GLQFRL
Trigger: CAGGCGAAACTGAAGACCCCAACTCAGCCCCAGCGG...TCCCACCAAGGAATGAGATATGTGGACCTCACTGCTCCCCCAACCCAGCGTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR CCA 90 bp CTTCTGGGTCAGGTAGGGCCTCACTTGTCACTTGATTGCTGCTGTAGACACTCAGGACGGTGCAGGTCGTaGCCCAGCTGGGAACGGTGG +
Preference number: 4 (lower is better)
Translates to: LLGQVGPHLSLDCCCRHSGRCRS*PSWERW
Trigger: CCACCGTTCCCAGCTGGGCCACGACCTGCACCGTCC...TGAGTGTCTACAGCAGCAATCAAGTGACAAGTGAGGCCCTACCTGACCCAGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR TCA 90 bp TTGGCGGCGCTGCCGTCCTCCGTCGTGCCGTCCCCAAATAGATCCGCGCTGTCCATGTTTTCAAGCAGCTaGAAAGGATGCTGGGTTTCA +
Preference number: 4 (lower is better)
Translates to: LAALPSSVVPSPNRSALSMFSSS*KGCWVS
Trigger: TGAAACCCAGCATCCTTTTCAGCTGCTTGAAAACAT...GGACAGCGCGGATCTATTTGGGGACGGCACGACGGAGGACGGCAGCGCCGCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597739.1
CDS-3UTR TCA 90 bp CTGACGCTGGGTTGGGGGAGCAGTGAGGTCCACATATCTCATTCCTTGGTGGGACCAACCTGGAGCGGGTaGCAAGCAAGAGAAGGGTCT +
Preference number: 4 (lower is better)
Translates to: LTLGWGSSEVHISHSLVGPTWSG*QAREGS
Trigger: AGACCCTTCTCTTGCTTGTCACCCGCTCCAGGTTGG...TCCCACCAAGGAATGAGATATGTGGACCTCACTGCTCCCCCAACCCAGCGTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
CDS-3UTR TCA 90 bp CGAGAGATGGCCAGCACAGTCCGAATGAACCACGAGGGGTGGACGATGATCAAGCCAACCTGGAGCGGGTaGCAAGCAAGAGAAGGGTCT +
Preference number: 4 (lower is better)
Translates to: REMASTVRMNHEGWTMIKPTWSG*QAREGS
Trigger: AGACCCTTCTCTTGCTTGTCACCCGCTCCAGGTTGG...CTTGATCATCGTCCACCCCTCGTGGTTCATTCGGACTGTGCTGGCCATCTCTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597739.1
CDS-3UTR TCA 90 bp AAGCAGCTGAAAAGGATGCTGGGTTTCAGAGATGAACGGAGGGGCTGGCACCCTAGCTGGGTGTCATTATaGGCGAGAAGGGGGCGGGTC +
Preference number: 4 (lower is better)
Translates to: KQLKRMLGFRDERRGWHPSWVSL*ARRGRV
Trigger: GACCCGCCCCCTTCTCGCTCATAATGACACCCAGCT...AGGGTGCCAGCCCCTCCGTTCATCTCTGAAACCCAGCATCCTTTTCAGCTGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
CDS-3UTR TCA 90 bp ACCCTGATACAAATCCATCTCAAAGCCCATCTGTGGACGGTGCAGGTCGTGGCCGGCCCCAGTCTTCCATaGCGGTTAAGGCCCAGCAGT +
Preference number: 4 (lower is better)
Translates to: TLIQIHLKAHLWTVQVVAGPSLP*RLRPSS
Trigger: ACTGCTGGGCCTTAACCGTCATGGAAGACTGGGGCC...GGCCACGACCTGCACCGTCCACAGATGGGCTTTGAGATGGATTTGTATCAGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR TCA 90 bp AAGAACCCGCTGGTCCAAGCTTTGAATGCAGGTGGCTGCGGCCAGCGCACTGGATCCGATTGGGTGGAATaGGTTCTTTCCTGTCCCCGT +
Preference number: 4 (lower is better)
Translates to: KNPLVQALNAGGCGQRTGSDWVE*VLSCPR
Trigger: ACGGGGACAGGAAAGAACTCATTCCACCCAATCGGA...TCCAGTGCGCTGGCCGCAGCCACCTGCATTCAAAGCTTGGACCAGCGGGTTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR GCA 90 bp AAGAACCCGCTGGTCCAAGCTTTGAATGCAGGTGGCTGCGGCCAGCGCACTGGAGGAAGATCTTCGTCCTaGCATTCCTCCTTCACGTCC +
Preference number: 4 (lower is better)
Translates to: KNPLVQALNAGGCGQRTGGRSSS*HSSFTS
Trigger: GGACGTGAAGGAGGAATGGCAGGACGAAGATCTTCC...TCCAGTGCGCTGGCCGCAGCCACCTGCATTCAAAGCTTGGACCAGCGGGTTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
CDS-3UTR GCA 90 bp AAGAACCCGCTGGTCCAAGCTTTGAATGCAGGTGGCTGCGGCCAGCGCACTGGATGCAGGTCTATACGGTaGTCTTGCTCCCCGATGATC +
Preference number: 4 (lower is better)
Translates to: KNPLVQALNAGGCGQRTGCRSIR*SCSPMI
Trigger: GATCATCGGGGAGCAAGAGCACCGTATAGACCTGCA...TCCAGTGCGCTGGCCGCAGCCACCTGCATTCAAAGCTTGGACCAGCGGGTTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
CDS-3UTR GCA 90 bp CCATTCCCCAGGAACTCCAGCGAGTCGGTCTCATCGGGGGTCTCGATGTCATCCTGCAGGTCTATACGGTaGTCTTGCTCCCCGATGATC +
Preference number: 4 (lower is better)
Translates to: PFPRNSSESVSSGVSMSSCRSIR*SCSPMI
Trigger: GATCATCGGGGAGCAAGAGCACCGTATAGACCTGCA...GGATGACATCGAGACCCCCGATGAGACCGACTCGCTGGAGTTCCTGGGGAATGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000597739.1
CDS-3UTR GCA 90 bp ATGCTGAGACCCAGAGGTGTCCCGTCACAGCCGGTGGCTCCACAGGAACCTGCATCCATAGGGATGAGTTaGTCCAGGTCTTCCAAGCTG +
Preference number: 4 (lower is better)
Translates to: MLRPRGVPSQPVAPQEPASIGMS*SRSSKL
Trigger: CAGCTTGGAAGACCTGGAGCAACTCATCCCTATGGA...TGCAGGTTCCTGTGGAGCCACCGGCTGTGACGGGACACCTCTGGGTCTCAGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR GCA 90 bp GATGAGATCTGGGGCCAGTGGGCGTCTGACAGAGGTTTTCTGGCATCTGGAATCGGTCCAAGCTTTGAATaGAGGTGGCTGCGGCCAGCG +
Preference number: 4 (lower is better)
Translates to: DEIWGQWASDRGFLASGIGPSFE*RWLRPA
Trigger: CGCTGGCCGCAGCCACCTGCATTCAAAGCTTGGACC...GATTCCAGATGCCAGAAAACCTCTGTCAGACGCCCACTGGCCCCAGATCTCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
CDS-3UTR GCA 90 bp GGATGCTGGGTTTCAGAGATGAACGGAGGGGCTGGCACCCTTGGAAGATTGGGAAGGCGTGAGCCATCGTaGCTGGCCCAGCCTTTTCTT +
Preference number: 4 (lower is better)
Translates to: GCWVSEMNGGAGTLGRLGRREPS*LAQPFL
Trigger: AAGAAAAGGCTGGGCCAGGCACGATGGCTCACGCCT...TCCCAATCTTCCAAGGGTGCCAGCCCCTCCGTTCATCTCTGAAACCCAGCATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
CDS-3UTR GCA 90 bp GCAGTTCTTGTCACTGTTGGGTTAGAACGATTCATGCTGGAGCTGCGTGCCTTTGCCGGGGGCCTCTTTTaGTCTGGAGGGTCCGCTGGG +
Preference number: 4 (lower is better)
Translates to: AVLVTVGLERFMLELRAFAGGLF*SGGSAG
Trigger: CCCAGCGGACCCTCCAGAGCAAAAGAGGCCCCCGGC...AAAGGCACGCAGCTCCAGCATGAATCGTTCTAACCCAACAGTGACAAGAACTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR CCA 90 bp TGGGGGAGCAGTGAGGTCCACATATCTCATTCCTTGGTGGGAGGTATTGACGGGGCATGTTCTTGGCGGTaGCCACGGGGGTGTCGTCTT +
Preference number: 4 (lower is better)
Translates to: WGSSEVHISHSLVGGIDGACSWR*PRGCRL
Trigger: AAGACGACACCCCCGTGGCCACCGCCAAGAACATGC...CCCGTCAATACCTCCCACCAAGGAATGAGATATGTGGACCTCACTGCTCCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
CDS-3UTR CCA 90 bp GTGACAAGCAAGAGAAGGGTCTTGAATCTTGTATCCAGCTCTGACCACAGAGGCCCCCGGGCATGTTCTTaGCGGTGGCCACGGGGGTGT +
Preference number: 4 (lower is better)
Translates to: VTSKRRVLNLVSSSDHRGPRACS*RWPRGC
Trigger: ACACCCCCGTGGCCACCGCCAAGAACATGCCCGGGG...GCCTCTGTGGTCAGAGCTGGATACAAGATTCAAGACCCTTCTCTTGCTTGTCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000450849.7
ENST00000597739.1
ENST00000600960.1
CDS-3UTR CCA 90 bp TGGGGGAGCAGTGAGGTCCACATATCTCATTCCTTGGTGGGAGGTATTGACGGGGGGGAGGCTGCTGTCTaGAAGGAAGCAGGCTGCGAA +
Preference number: 4 (lower is better)
Translates to: WGSSEVHISHSLVGGIDGGEAAV*KEAGCE
Trigger: TTCGCAGCCTGCTTCCTTCCAGACAGCAGCCTCCCC...CCCGTCAATACCTCCCACCAAGGAATGAGATATGTGGACCTCACTGCTCCCCCA
58% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
CDS-3UTR CCA 90 bp GCCAGCGCACTGGATTTATCTTCCCGAATGACTTCTGAAACACTCAAACGCCCGTCCTCCGCCGGGGCGTaGCACCGTTCAGGTACACGA +
Preference number: 4 (lower is better)
Translates to: ASALDLSSRMTSETLKRPSSAGA*HRSGTR
Trigger: TCGTGTACCTGAACGGTGCCACGCCCCGGCGGAGGA...CGGGCGTTTGAGTGTTTCAGAAGTCATTCGGGAAGATAAATCCAGTGCGCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
CDS-3UTR CCA 90 bp ACTGGTGCCACCTCTGGCTTCTCTTCAGACCTGGGCAGCACAAACTCCGGCTGGTTGCAGGACGCAGTCTaGGATCTGGACGTGTTCCAT +
Preference number: 4 (lower is better)
Translates to: TGATSGFSSDLGSTNSGWLQDAV*DLDVFH
Trigger: ATGGAACACGTCCAGATCCCAGACTGCGTCCTGCAA...CCAGCCGGAGTTTGTGCTGCCCAGGTCTGAAGAGAAGCCAGAGGTGGCACCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597739.1
CDS-3UTR CCA 90 bp GCGAGAGATGGCCAGCACAGTCCGAATGAACCACGAGGGGTGGACGATGATCAACACTGGTGCCACCTCTaGCTTCTCTTCAGACCTGGG +
Preference number: 4 (lower is better)
Translates to: ARDGQHSPNEPRGVDDDQHWCHL*LLFRPG
Trigger: CCCAGGTCTGAAGAGAAGCCAGAGGTGGCACCAGTG...TTGATCATCGTCCACCCCTCGTGGTTCATTCGGACTGTGCTGGCCATCTCTCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597739.1
CDS-3UTR CCA 90 bp GGATGCTGGGTTTCAGAGATGAACGGAGGGGCTGGCACCCTTGGAAGATTGGGACACTGGTGCCACCTCTaGCTTCTCTTCAGACCTGGG +
Preference number: 4 (lower is better)
Translates to: GCWVSEMNGGAGTLGRLGHWCHL*LLFRPG
Trigger: CCCAGGTCTGAAGAGAAGCCAGAGGTGGCACCAGTG...TCCCAATCTTCCAAGGGTGCCAGCCCCTCCGTTCATCTCTGAAACCCAGCATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000450849.7
ENST00000597739.1
ENST00000600960.1
CDS-3UTR CCA 90 bp TGCCGTCCCCAAATAGATCCGCGCTGTCCCCGGGCATGTTCTTGGCGGTGGCCAAGCTGGGCCCTTTTCTaGAACGCACAAATACTGCAT +
Preference number: 4 (lower is better)
Translates to: CRPQIDPRCPRACSWRWPSWALF*NAQILH
Trigger: ATGCAGTATTTGTGCGTTCCAGAAAAGGGCCCAGCT...TGGCCACCGCCAAGAACATGCCCGGGGACAGCGCGGATCTATTTGGGGACGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000597739.1
CDS-3UTR CCA 90 bp GTGACAAGCAAGAGAAGGGTCTTGAATCTTGTATCCAGCTCTGACCACAGAGGCCAGCCGGGGTGGCGGTaGGTGTCTGTGGCTCCAACC +
Preference number: 4 (lower is better)
Translates to: VTSKRRVLNLVSSSDHRGQPGWR*VSVAPT
Trigger: GGTTGGAGCCACAGACACCCACCGCCACCCCGGCTG...GCCTCTGTGGTCAGAGCTGGATACAAGATTCAAGACCCTTCTCTTGCTTGTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
CDS-3UTR CCA 90 bp TGGGGGAGCAGTGAGGTCCACATATCTCATTCCTTGGTGGGAGGTATTGACGGGAGCTTTGAATGCAGGTaGCTGCGGCCAGCGCACTGG +
Preference number: 4 (lower is better)
Translates to: WGSSEVHISHSLVGGIDGSFECR*LRPAHW
Trigger: CCAGTGCGCTGGCCGCAGCCACCTGCATTCAAAGCT...CCCGTCAATACCTCCCACCAAGGAATGAGATATGTGGACCTCACTGCTCCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
CDS-3UTR CCA 90 bp AAGCAGCTGAAAAGGATGCTGGGTTTCAGAGATGAACGGAGGGGCTGGCACCCTCTCAAAGCCCATCTGTaGACGGTGCAGGTCGTGGCC +
Preference number: 4 (lower is better)
Translates to: KQLKRMLGFRDERRGWHPLKAHL*TVQVVA
Trigger: GGCCACGACCTGCACCGTCCACAGATGGGCTTTGAG...AGGGTGCCAGCCCCTCCGTTCATCTCTGAAACCCAGCATCCTTTTCAGCTGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR CCA 90 bp AAGAACCCGCTGGTCCAAGCTTTGAATGCAGGTGGCTGCGGCCAGCGCACTGGACGCAAAACTCATCGTTaGAAGGATGGGCTGCTGACC +
Preference number: 4 (lower is better)
Translates to: KNPLVQALNAGGCGQRTGRKTHR*KDGLLT
Trigger: GGTCAGCAGCCCATCCTTCCAACGATGAGTTTTGCG...TCCAGTGCGCTGGCCGCAGCCACCTGCATTCAAAGCTTGGACCAGCGGGTTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR TCA 90 bp GCCAGCGCACTGGATTTATCTTCCCGAATGACTTCTGAAACACTCAAACGCCCGGCTGGGTTTCAGAGATaGACGGAGGGGCTGGCACCC +
Preference number: 4 (lower is better)
Translates to: ASALDLSSRMTSETLKRPAGFQR*TEGLAP
Trigger: GGGTGCCAGCCCCTCCGTTCATCTCTGAAACCCAGC...CGGGCGTTTGAGTGTTTCAGAAGTCATTCGGGAAGATAAATCCAGTGCGCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
CDS-3UTR TCA 90 bp AGGAACTCCAGCGAGTCGGTCTCATCGGGGGTCTCGATGTCATCCACGTTAATATCGGCTGAGAGTTCGTaGGTGTGGAAGGGTGAGGGG +
Preference number: 4 (lower is better)
Translates to: RNSSESVSSGVSMSSTLISAESS*VWKGEG
Trigger: CCCCTCACCCTTCCACACTCACGAACTCTCAGCCGA...TATTAACGTGGATGACATCGAGACCCCCGATGAGACCGACTCGCTGGAGTTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597739.1
CDS-3UTR TCA 90 bp GGATGCTGGGTTTCAGAGATGAACGGAGGGGCTGGCACCCTTGGAAGATTGGGACTTGCCTTCCTCGGCTaGGAGTTCGTGAGTGTGGAA +
Preference number: 4 (lower is better)
Translates to: GCWVSEMNGGAGTLGRLGLAFLG*EFVSVE
Trigger: TTCCACACTCACGAACTCTCAGCCGAGGAAGGCAAG...TCCCAATCTTCCAAGGGTGCCAGCCCCTCCGTTCATCTCTGAAACCCAGCATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000450849.7
ENST00000597739.1
ENST00000600960.1
CDS-3UTR TCA 90 bp GTCTTCCTCATGGCAGGAGCTGCTGGCTTTTGGGGATGGGACTCGCGCAGGACCTTCCCGAATGACTTCTaGAACACTCAAACGCCCGAT +
Preference number: 4 (lower is better)
Translates to: VFLMAGAAGFWGWDSRRTFPNDF*NTQTPD
Trigger: ATCGGGCGTTTGAGTGTTTCAGAAGTCATTCGGGAA...GGTCCTGCGCGAGTCCCATCCCCAAAAGCCAGCAGCTCCTGCCATGAGGAAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR GCA 90 bp CAGTCTTTCCTCTTCGTATTGCAGGACGCAGTCTGGGATCTGGACGTGTTCCATTGTCTTCCACCGGGCTaGCAAGCAGTTCCACCCCCG +
Preference number: 4 (lower is better)
Translates to: QSFLFVLQDAVWDLDVFHCLPPG*QAVPPP
Trigger: CGGGGGTGGAACTGCTTGGCAGCCCGGTGGAAGACA...ATGGAACACGTCCAGATCCCAGACTGCGTCCTGCAATACGAAGAGGAAAGACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597739.1
CDS-3UTR GCA 90 bp CCATTCCCCAGGAACTCCAGCGAGTCGGTCTCATCGGGGGTCTCGATGTCATCCTCTATACGGTGCTCTTaGTCCCCGATGATCACTGTC +
Preference number: 4 (lower is better)
Translates to: PFPRNSSESVSSGVSMSSSIRCS*SPMITV
Trigger: GACAGTGATCATCGGGGAGCAAGAGCACCGTATAGA...GGATGACATCGAGACCCCCGATGAGACCGACTCGCTGGAGTTCCTGGGGAATGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000597739.1
CDS-3UTR GCA 90 bp CCATTCCCCAGGAACTCCAGCGAGTCGGTCTCATCGGGGGTCTCGATGTCATCCTCCATAGGGATGAGTTaGTCCAGGTCTTCCAAGCTG +
Preference number: 4 (lower is better)
Translates to: PFPRNSSESVSSGVSMSSSIGMS*SRSSKL
Trigger: CAGCTTGGAAGACCTGGAGCAACTCATCCCTATGGA...GGATGACATCGAGACCCCCGATGAGACCGACTCGCTGGAGTTCCTGGGGAATGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597739.1
CDS-3UTR GCA 90 bp CCGAACAAGAACCCGCTGGTCCAAGCTTTGAATGCAGGTGGCTGCGGCCAGCGCACTGGGGTGTCATTTTaGAATCGGAGGACAAGGATG +
Preference number: 4 (lower is better)
Translates to: PNKNPLVQALNAGGCGQRTGVSF*NRRTRM
Trigger: CATCCTTGTCCTCCGATTGCAAAATGACACCCCAGT...GCGCTGGCCGCAGCCACCTGCATTCAAAGCTTGGACCAGCGGGTTCTTGTTCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
CDS-3UTR GCA 90 bp CTGATACAAATCCATCTCAAAGCCCATCTGTGGACGGTGCAGGTCGTGGCCCAGGGCTCCACAGGAACCTaGAGGCATAAGCCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: LIQIHLKAHLWTVQVVAQGSTGT*RHKPAQ
Trigger: CTGAGCAGGCTTATGCCTGCAGGTTCCTGTGGAGCC...CTGGGCCACGACCTGCACCGTCCACAGATGGGCTTTGAGATGGATTTGTATCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR GCA 90 bp ATGAACGGAGGGGCTGGCACCCTTGGAAGATTGGGACTCAGGATGAGGCAGGATGCAATCTCGGCTGACTaGAATCTCTGCCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: MNGGAGTLGRLGLRMRQDAISAD*NLCLLG
Trigger: ACCCAGGAGGCAGAGATTGCAGTCAGCCGAGATTGC...ATCCTGCCTCATCCTGAGTCCCAATCTTCCAAGGGTGCCAGCCCCTCCGTTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR GCA 90 bp GATGAGATCTGGGGCCAGTGGGCGTCTGACAGAGGTTTTCTGGCATCTGGAATCCATGCTGGAGCTGCGTaGCTTTGGTCACCTGGGACA +
Preference number: 4 (lower is better)
Translates to: DEIWGQWASDRGFLASGIHAGAA*LWSPGT
Trigger: TGTCCCAGGTGACCAAAGGCACGCAGCTCCAGCATG...GATTCCAGATGCCAGAAAACCTCTGTCAGACGCCCACTGGCCCCAGATCTCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR CCA 90 bp GCTGCTGATGACGTACAGGAAGAGGTTCTCCATGATGTAGTGGTAGTCGGGGAGTTTCCATCCGGAGCGTaGCTTCGGTGGTCCCCATGG +
Preference number: 4 (lower is better)
Translates to: AADDVQEEVLHDVVVVGEFPSGA*LRWSPW
Trigger: CCATGGGGACCACCGAAGCCACGCTCCGGATGGAAA...CTCCCCGACTACCACTACATCATGGAGAACCTCTTCCTGTACGTCATCAGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597739.1
CDS-3UTR CCA 90 bp CCATTCCCCAGGAACTCCAGCGAGTCGGTCTCATCGGGGGTCTCGATGTCATCCAGAAATGTTGATCTCTaGGGCCACCAGCGTCTTCCT +
Preference number: 4 (lower is better)
Translates to: PFPRNSSESVSSGVSMSSRNVDL*GHQRLP
Trigger: AGGAAGACGCTGGTGGCCCCAGAGATCAACATTTCT...GGATGACATCGAGACCCCCGATGAGACCGACTCGCTGGAGTTCCTGGGGAATGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597739.1
CDS-3UTR CCA 90 bp AAGAACCCGCTGGTCCAAGCTTTGAATGCAGGTGGCTGCGGCCAGCGCACTGGAAGAAATGTTGATCTCTaGGGCCACCAGCGTCTTCCT +
Preference number: 4 (lower is better)
Translates to: KNPLVQALNAGGCGQRTGRNVDL*GHQRLP
Trigger: AGGAAGACGCTGGTGGCCCCAGAGATCAACATTTCT...TCCAGTGCGCTGGCCGCAGCCACCTGCATTCAAAGCTTGGACCAGCGGGTTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
CDS-3UTR CCA 90 bp TCGTATTGCAGGACGCAGTCTGGGATCTGGACGTGTTCCATAGGGATGAGTTGCGCATGTTCTTGGCGGTaGCCACGGGGGTGTCGTCTT +
Preference number: 4 (lower is better)
Translates to: SYCRTQSGIWTCSIGMSCACSWR*PRGCRL
Trigger: AAGACGACACCCCCGTGGCCACCGCCAAGAACATGC...GCAACTCATCCCTATGGAACACGTCCAGATCCCAGACTGCGTCCTGCAATACGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597739.1
CDS-3UTR CCA 90 bp ACAAGCAAGAGAAGGGTCTTGAATCTTGTATCCAGCTCTGACCACAGAGGCTGCTCCTCCGCCGGGGCGTaGCACCGTTCAGGTACACGA +
Preference number: 4 (lower is better)
Translates to: TSKRRVLNLVSSSDHRGCSSAGA*HRSGTR
Trigger: TCGTGTACCTGAACGGTGCCACGCCCCGGCGGAGGA...GCAGCCTCTGTGGTCAGAGCTGGATACAAGATTCAAGACCCTTCTCTTGCTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000450849.7
ENST00000597739.1
ENST00000600960.1
CDS-3UTR CCA 90 bp CCATTCCCCAGGAACTCCAGCGAGTCGGTCTCATCGGGGGTCTCGATGTCATCCATGAACCACGAGGGGTaGACGATGATCAAGGACTTC +
Preference number: 4 (lower is better)
Translates to: PFPRNSSESVSSGVSMSSMNHEG*TMIKDF
Trigger: GAAGTCCTTGATCATCGTCCACCCCTCGTGGTTCAT...GGATGACATCGAGACCCCCGATGAGACCGACTCGCTGGAGTTCCTGGGGAATGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000597739.1
CDS-3UTR CCA 90 bp CGAGAGATGGCCAGCACAGTCCGAATGAACCACGAGGGGTGGACGATGATCAAGGAGATCTGGGGCCAGTaGGCGTCTGACAGAGGTTTT +
Preference number: 4 (lower is better)
Translates to: REMASTVRMNHEGWTMIKEIWGQ*ASDRGF
Trigger: AAAACCTCTGTCAGACGCCCACTGGCCCCAGATCTC...CTTGATCATCGTCCACCCCTCGTGGTTCATTCGGACTGTGCTGGCCATCTCTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597739.1
CDS-3UTR CCA 90 bp CTTTGTTATGCTCACGTCGCCTCAGGACATGAACGTGACTTAGGGTTGGAACTTCAGACCCAGCCGGGGTaGCGGTGGGTGTCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: LCYAHVASGHERDLGLELQTQPG*RWVSVA
Trigger: AGCCACAGACACCCACCGCCACCCCGGCTGGGTCTG...AAGTTCCAACCCTAAGTCACGTTCATGTCCTGAGGCGACGTGAGCATAACAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600960.1
CDS-3UTR CCA 90 bp ATGAACGGAGGGGCTGGCACCCTTGGAAGATTGGGACTCAGGATGAGGCAGGATGAGGACAAGGATGGTTaGCAGCGGCTCTTCTTGTGC +
Preference number: 4 (lower is better)
Translates to: MNGGAGTLGRLGLRMRQDEDKDG*QRLFLC
Trigger: GCACAAGAAGAGCCGCTGCCAACCATCCTTGTCCTC...ATCCTGCCTCATCCTGAGTCCCAATCTTCCAAGGGTGCCAGCCCCTCCGTTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
CDS-3UTR CCA 90 bp TGGGGGAGCAGTGAGGTCCACATATCTCATTCCTTGGTGGGAGGTATTGACGGGCTAGGAAGAAGGGCCTaGAGAATGTGCCCGCCCTAC +
Preference number: 4 (lower is better)
Translates to: WGSSEVHISHSLVGGIDGLGRRA*RMCPPY
Trigger: GTAGGGCGGGCACATTCTCCAGGCCCTTCTTCCTAG...CCCGTCAATACCTCCCACCAAGGAATGAGATATGTGGACCTCACTGCTCCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000450849.7
3UTR CAA 72 bp ATTTGCCTCCCGAACAAGAACCCGCTGGTCCAAGCTTaGAATGCAGGTGGCTGCGGCCAGCGCACTGGATTT +
Preference number: 4 (lower is better)
Translates to: ICLPNKNPLVQA*NAGGCGQRTGF
Trigger: AAATCCAGTGCGCTGGCCGCAGCCACCTGCATTCAAAGCTTGGACCAGCGGGTTCTTGTTCGGGAGGCAAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
CDS-3UTR TCA 90 bp TCCTCTTCGTATTGCAGGACGCAGTCTGGGATCTGGACGTGTTCCATAGGGATGGAAGAGGCACTGGCTTaGAGCAGGGATGACCCCTCT +
Preference number: 4 (lower is better)
Translates to: SSSYCRTQSGIWTCSIGMEEALA*SRDDPS
Trigger: AGAGGGGTCATCCCTGCTTCAAGCCAGTGCCTCTTC...CATCCCTATGGAACACGTCCAGATCCCAGACTGCGTCCTGCAATACGAAGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597739.1
CDS-3UTR TCA 90 bp GATGAGATCTGGGGCCAGTGGGCGTCTGACAGAGGTTTTCTGGCATCTGGAATCAGTACCCTCCGTGGGTaGCCACTTTCATGTAAGGCC +
Preference number: 4 (lower is better)
Translates to: DEIWGQWASDRGFLASGISTLRG*PLSCKA
Trigger: GGCCTTACATGAAAGTGGTCACCCACGGAGGGTACT...GATTCCAGATGCCAGAAAACCTCTGTCAGACGCCCACTGGCCCCAGATCTCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000450849.7
ENST00000597739.1
ENST00000600960.1
CDS-3UTR TCA 90 bp GTGACAAGCAAGAGAAGGGTCTTGAATCTTGTATCCAGCTCTGACCACAGAGGCCAGGATGAGGCAGGATaGGATCTGGGGCCAGTGGGC +
Preference number: 4 (lower is better)
Translates to: VTSKRRVLNLVSSSDHRGQDEAG*DLGPVG
Trigger: GCCCACTGGCCCCAGATCTCATCCTGCCTCATCCTG...GCCTCTGTGGTCAGAGCTGGATACAAGATTCAAGACCCTTCTCTTGCTTGTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000450849.7
ENST00000597739.1
ENST00000600960.1
CDS-3UTR TCA 90 bp AAGCAGCTGAAAAGGATGCTGGGTTTCAGAGATGAACGGAGGGGCTGGCACCCTGATTGGGACTCAGGATaGGGCAGGATGAGATCTGGG +
Preference number: 4 (lower is better)
Translates to: KQLKRMLGFRDERRGWHPDWDSG*GRMRSG
Trigger: CCCAGATCTCATCCTGCCTCATCCTGAGTCCCAATC...AGGGTGCCAGCCCCTCCGTTCATCTCTGAAACCCAGCATCCTTTTCAGCTGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000450849.7
ENST00000597739.1
ENST00000600960.1
CDS-3UTR TCA 90 bp TGGGGGAGCAGTGAGGTCCACATATCTCATTCCTTGGTGGGAGGTATTGACGGGTCTTGTATCCAGCTCTaGCCACAGAGGCTGCGAGCA +
Preference number: 4 (lower is better)
Translates to: WGSSEVHISHSLVGGIDGSCIQL*PQRLRA
Trigger: TGCTCGCAGCCTCTGTGGTCAGAGCTGGATACAAGA...CCCGTCAATACCTCCCACCAAGGAATGAGATATGTGGACCTCACTGCTCCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
CDS-3UTR TCA 90 bp GTGACAAGCAAGAGAAGGGTCTTGAATCTTGTATCCAGCTCTGACCACAGAGGCCGCTGGTCCAAGCTTTaGATGCAGGTGGCTGCGGCC +
Preference number: 4 (lower is better)
Translates to: VTSKRRVLNLVSSSDHRGRWSKL*MQVAAA
Trigger: GGCCGCAGCCACCTGCATTCAAAGCTTGGACCAGCG...GCCTCTGTGGTCAGAGCTGGATACAAGATTCAAGACCCTTCTCTTGCTTGTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
CDS-3UTR TCA 90 bp GATGAGATCTGGGGCCAGTGGGCGTCTGACAGAGGTTTTCTGGCATCTGGAATCTCTACCTCAGCCTCCTaGGTAGCTGGGACTACAGGT +
Preference number: 4 (lower is better)
Translates to: DEIWGQWASDRGFLASGISTSAS*VAGTTG
Trigger: ACCTGTAGTCCCAGCTACTCAGGAGGCTGAGGTAGA...GATTCCAGATGCCAGAAAACCTCTGTCAGACGCCCACTGGCCCCAGATCTCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR TCA 90 bp GATGAGATCTGGGGCCAGTGGGCGTCTGACAGAGGTTTTCTGGCATCTGGAATCCCTGCCTGTTGTCTGTaGCTGCTGGTGATCCAAAGG +
Preference number: 4 (lower is better)
Translates to: DEIWGQWASDRGFLASGIPACCL*LLVIQR
Trigger: CCTTTGGATCACCAGCAGTCACAGACAACAGGCAGG...GATTCCAGATGCCAGAAAACCTCTGTCAGACGCCCACTGGCCCCAGATCTCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR GCA 90 bp GCAGTTCTTGTCACTGTTGGGTTAGAACGATTCATGCTGGAGCTGCGTGCCTTTTGTCTTCCACCGGGCTaGCAAGCAGTTCCACCCCCG +
Preference number: 4 (lower is better)
Translates to: AVLVTVGLERFMLELRAFCLPPG*QAVPPP
Trigger: CGGGGGTGGAACTGCTTGGCAGCCCGGTGGAAGACA...AAAGGCACGCAGCTCCAGCATGAATCGTTCTAACCCAACAGTGACAAGAACTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR GCA 90 bp ACAAGCAAGAGAAGGGTCTTGAATCTTGTATCCAGCTCTGACCACAGAGGCTGCTGTCTTCCACCGGGCTaGCAAGCAGTTCCACCCCCG +
Preference number: 4 (lower is better)
Translates to: TSKRRVLNLVSSSDHRGCCLPPG*QAVPPP
Trigger: CGGGGGTGGAACTGCTTGGCAGCCCGGTGGAAGACA...GCAGCCTCTGTGGTCAGAGCTGGATACAAGATTCAAGACCCTTCTCTTGCTTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000450849.7
ENST00000597739.1
ENST00000600960.1
CDS-3UTR GCA 90 bp CCGAACAAGAACCCGCTGGTCCAAGCTTTGAATGCAGGTGGCTGCGGCCAGCGCGTCTTCCTCTTACGATaGGCTCCGTTGAAATTTAGC +
Preference number: 4 (lower is better)
Translates to: PNKNPLVQALNAGGCGQRVFLLR*APLKFS
Trigger: GCTAAATTTCAACGGAGCGCATCGTAAGAGGAAGAC...GCGCTGGCCGCAGCCACCTGCATTCAAAGCTTGGACCAGCGGGTTCTTGTTCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
CDS-3UTR GCA 90 bp ATGAACGGAGGGGCTGGCACCCTTGGAAGATTGGGACTCAGGATGAGGCAGGATCAGTTTCTGAGCCTCTaGTGTTCCAACCCGGAACAG +
Preference number: 4 (lower is better)
Translates to: MNGGAGTLGRLGLRMRQDQFLSL*CSNPEQ
Trigger: CTGTTCCGGGTTGGAACAGCAGAGGCTCAGAAACTG...ATCCTGCCTCATCCTGAGTCCCAATCTTCCAAGGGTGCCAGCCCCTCCGTTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
CDS-3UTR GCA 90 bp GCCAGCGCACTGGATTTATCTTCCCGAATGACTTCTGAAACACTCAAACGCCCGGGTCCAAGCTTTGAATaGAGGTGGCTGCGGCCAGCG +
Preference number: 4 (lower is better)
Translates to: ASALDLSSRMTSETLKRPGPSFE*RWLRPA
Trigger: CGCTGGCCGCAGCCACCTGCATTCAAAGCTTGGACC...CGGGCGTTTGAGTGTTTCAGAAGTCATTCGGGAAGATAAATCCAGTGCGCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
CDS-3UTR GCA 90 bp TTCGCCTGCCTGTTGTCTGTGACTGCTGGTGATCCAAAGGGGCGTGGGTGGGCCCCAAATGCAATTCCTTaGTGTCTCAGGTCAAGATGC +
Preference number: 4 (lower is better)
Translates to: FACLLSVTAGDPKGRGWAPNAIP*CLRSRC
Trigger: GCATCTTGACCTGAGACAGCAAGGAATTGCATTTGG...GGCCCACCCACGCCCCTTTGGATCACCAGCAGTCACAGACAACAGGCAGGCGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR GCA 90 bp ACCCTGATACAAATCCATCTCAAAGCCCATCTGTGGACGGTGCAGGTCGTGGCCAGGGTCTTGCCCCTGTaGCCGGGATTTGACATTTGG +
Preference number: 4 (lower is better)
Translates to: TLIQIHLKAHLWTVQVVARVLPL*PGFDIW
Trigger: CCAAATGTCAAATCCCGGGCACAGGGGCAAGACCCT...GGCCACGACCTGCACCGTCCACAGATGGGCTTTGAGATGGATTTGTATCAGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR CCA 90 bp ACCCTGATACAAATCCATCTCAAAGCCCATCTGTGGACGGTGCAGGTCGTGGCCGCCTCTCCTCCTTACTaGCAAACAAAGGCGAGCCCT +
Preference number: 4 (lower is better)
Translates to: TLIQIHLKAHLWTVQVVAASPPY*QTKASP
Trigger: AGGGCTCGCCTTTGTTTGCCAGTAAGGAGGAGAGGC...GGCCACGACCTGCACCGTCCACAGATGGGCTTTGAGATGGATTTGTATCAGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR CCA 90 bp TGCCGTCCCCAAATAGATCCGCGCTGTCCCCGGGCATGTTCTTGGCGGTGGCCAAAGCTGTGCACGTACTaGATCTTGTTGATGAACTTG +
Preference number: 4 (lower is better)
Translates to: CRPQIDPRCPRACSWRWPKLCTY*ILLMNL
Trigger: CAAGTTCATCAACAAGATCCAGTACGTGCACAGCTT...TGGCCACCGCCAAGAACATGCCCGGGGACAGCGCGGATCTATTTGGGGACGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597739.1
CDS-3UTR CCA 90 bp GTCCGATTGGGTGGAATGAGTTCTTTCCTGTCCCCGTCTCCTGTCTGTGACTTGCACTGGTGCCACCTCTaGCTTCTCTTCAGACCTGGG +
Preference number: 4 (lower is better)
Translates to: VRLGGMSSFLSPSPVCDLHWCHL*LLFRPG
Trigger: CCCAGGTCTGAAGAGAAGCCAGAGGTGGCACCAGTG...CAAGTCACAGACAGGAGACGGGGACAGGAAAGAACTCATTCCACCCAATCGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR CCA 90 bp AGGAACTCCAGCGAGTCGGTCTCATCGGGGGTCTCGATGTCATCCACGTTAATAGATGAACGGAGGGGCTaGCACCCTTGGAAGATTGGG +
Preference number: 4 (lower is better)
Translates to: RNSSESVSSGVSMSSTLIDERRG*HPWKIG
Trigger: CCCAATCTTCCAAGGGTGCCAGCCCCTCCGTTCATC...TATTAACGTGGATGACATCGAGACCCCCGATGAGACCGACTCGCTGGAGTTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597739.1
CDS-3UTR CCA 90 bp ATGAACGGAGGGGCTGGCACCCTTGGAAGATTGGGACTCAGGATGAGGCAGGATTCTGAGGCCGCATTCTaGAGGGAAAGGCACAGGAAA +
Preference number: 4 (lower is better)
Translates to: MNGGAGTLGRLGLRMRQDSEAAF*RERHRK
Trigger: TTTCCTGTGCCTTTCCCTCCAGAATGCGGCCTCAGA...ATCCTGCCTCATCCTGAGTCCCAATCTTCCAAGGGTGCCAGCCCCTCCGTTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
CDS-3UTR CCA 90 bp ACAAGCAAGAGAAGGGTCTTGAATCTTGTATCCAGCTCTGACCACAGAGGCTGCGCTGGCTTTTGGGGATaGGACTCGCGCAGGACCCTG +
Preference number: 4 (lower is better)
Translates to: TSKRRVLNLVSSSDHRGCAGFWG*DSRRTL
Trigger: CAGGGTCCTGCGCGAGTCCCATCCCCAAAAGCCAGC...GCAGCCTCTGTGGTCAGAGCTGGATACAAGATTCAAGACCCTTCTCTTGCTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR CCA 90 bp GATGAGATCTGGGGCCAGTGGGCGTCTGACAGAGGTTTTCTGGCATCTGGAATCAGCGACACCATTCACTaGGGTGGGAATTCGGGACAG +
Preference number: 4 (lower is better)
Translates to: DEIWGQWASDRGFLASGISDTIH*GGNSGQ
Trigger: CTGTCCCGAATTCCCACCCCAGTGAATGGTGTCGCT...GATTCCAGATGCCAGAAAACCTCTGTCAGACGCCCACTGGCCCCAGATCTCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR CCA 90 bp CTGGGTGTCATTATGAGCGAGAAGGGGGCGGGTCAAATGAAAAACCATGGGTGTCTGGCATCTATCTGCTaGAGCCTGTCTCCTCCGGGC +
Preference number: 4 (lower is better)
Translates to: LGVIMSEKGAGQMKNHGCLASIC*SLSPPG
Trigger: GCCCGGAGGAGACAGGCTCCAGCAGATAGATGCCAG...ACACCCATGGTTTTTCATTTGACCCGCCCCCTTCTCGCTCATAATGACACCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR CCA 90 bp ACAAGCAAGAGAAGGGTCTTGAATCTTGTATCCAGCTCTGACCACAGAGGCTGCCGTGGCAGCTGGGCCTaGCTGGCATCTATCTGCTGG +
Preference number: 4 (lower is better)
Translates to: TSKRRVLNLVSSSDHRGCRGSWA*LASICW
Trigger: CCAGCAGATAGATGCCAGCCAGGCCCAGCTGCCACG...GCAGCCTCTGTGGTCAGAGCTGGATACAAGATTCAAGACCCTTCTCTTGCTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR CCA 90 bp GCAGTTCTTGTCACTGTTGGGTTAGAACGATTCATGCTGGAGCTGCGTGCCTTTACCTGGGACAAATCGTaGCAGCTGGGCCTGGCTGGC +
Preference number: 4 (lower is better)
Translates to: AVLVTVGLERFMLELRAFTWDKS*QLGLAG
Trigger: GCCAGCCAGGCCCAGCTGCCACGATTTGTCCCAGGT...AAAGGCACGCAGCTCCAGCATGAATCGTTCTAACCCAACAGTGACAAGAACTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR CCA 90 bp TCCTCTTCGTATTGCAGGACGCAGTCTGGGATCTGGACGTGTTCCATAGGGATGCACCCCCGTCTCTTCTaGGAGTGGCCTGACAGTTTC +
Preference number: 4 (lower is better)
Translates to: SSSYCRTQSGIWTCSIGMHPRLF*EWPDSF
Trigger: GAAACTGTCAGGCCACTCCCAGAAGAGACGGGGGTG...CATCCCTATGGAACACGTCCAGATCCCAGACTGCGTCCTGCAATACGAAGAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597739.1
3UTR CAA 72 bp ACACCATTCACTGGGGTGGGAATTCGGGACAGGGTCTaGCCCCTGTGCCCGGGATTTGACATTTGGGAAACA +
Preference number: 4 (lower is better)
Translates to: TPFTGVGIRDRV*PLCPGFDIWET
Trigger: TGTTTCCCAAATGTCAAATCCCGGGCACAGGGGCAAGACCCTGTCCCGAATTCCCACCCCAGTGAATGGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR TCA 90 bp CTTCTGGGTCAGGTAGGGCCTCACTTGTCACTTGATTGCTGCTGTAGACACTCAGAAGAGGCACTGGCTTaGAGCAGGGATGACCCCTCT +
Preference number: 4 (lower is better)
Translates to: LLGQVGPHLSLDCCCRHSEEALA*SRDDPS
Trigger: AGAGGGGTCATCCCTGCTTCAAGCCAGTGCCTCTTC...TGAGTGTCTACAGCAGCAATCAAGTGACAAGTGAGGCCCTACCTGACCCAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR TCA 90 bp ATGAACGGAGGGGCTGGCACCCTTGGAAGATTGGGACTCAGGATGAGGCAGGATTACGATGCGCTCCGTTaGAATTTAGCGTGTTGGGAG +
Preference number: 4 (lower is better)
Translates to: MNGGAGTLGRLGLRMRQDYDALR*NLACWE
Trigger: CTCCCAACACGCTAAATTTCAACGGAGCGCATCGTA...ATCCTGCCTCATCCTGAGTCCCAATCTTCCAAGGGTGCCAGCCCCTCCGTTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000450849.7
ENST00000597739.1
ENST00000600960.1
CDS-3UTR TCA 90 bp GGATGCTGGGTTTCAGAGATGAACGGAGGGGCTGGCACCCTTGGAAGATTGGGATACGATGCGCTCCGTTaGAATTTAGCGTGTTGGGAG +
Preference number: 4 (lower is better)
Translates to: GCWVSEMNGGAGTLGRLGYDALR*NLACWE
Trigger: CTCCCAACACGCTAAATTTCAACGGAGCGCATCGTA...TCCCAATCTTCCAAGGGTGCCAGCCCCTCCGTTCATCTCTGAAACCCAGCATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000450849.7
ENST00000597739.1
ENST00000600960.1
CDS-3UTR TCA 90 bp ATGAACGGAGGGGCTGGCACCCTTGGAAGATTGGGACTCAGGATGAGGCAGGATAGGGACCCCTCACTCTaGTCCAGAGAAATGTTGATC +
Preference number: 4 (lower is better)
Translates to: MNGGAGTLGRLGLRMRQDRDPSL*SREMLI
Trigger: GATCAACATTTCTCTGGATCAGAGTGAGGGGTCCCT...ATCCTGCCTCATCCTGAGTCCCAATCTTCCAAGGGTGCCAGCCCCTCCGTTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000450849.7
ENST00000597739.1
ENST00000600960.1
CDS-3UTR TCA 90 bp CTTTGTTATGCTCACGTCGCCTCAGGACATGAACGTGACTTAGGGTTGGAACTTGCTCTTGCTCCCCGATaGTCACTGTCCGCCACAGGC +
Preference number: 4 (lower is better)
Translates to: LCYAHVASGHERDLGLELALAPR*SLSATG
Trigger: GCCTGTGGCGGACAGTGATCATCGGGGAGCAAGAGC...AAGTTCCAACCCTAAGTCACGTTCATGTCCTGAGGCGACGTGAGCATAACAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600960.1
CDS-3UTR TCA 90 bp CCGAACAAGAACCCGCTGGTCCAAGCTTTGAATGCAGGTGGCTGCGGCCAGCGCATGTTTTCAAGCAGCTaGAAAGGATGCTGGGTTTCA +
Preference number: 4 (lower is better)
Translates to: PNKNPLVQALNAGGCGQRMFSSS*KGCWVS
Trigger: TGAAACCCAGCATCCTTTTCAGCTGCTTGAAAACAT...GCGCTGGCCGCAGCCACCTGCATTCAAAGCTTGGACCAGCGGGTTCTTGTTCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
CDS-3UTR TCA 90 bp ACAAGCAAGAGAAGGGTCTTGAATCTTGTATCCAGCTCTGACCACAGAGGCTGCTCGGCTGAGAGTTCGTaGGTGTGGAAGGGTGAGGGG +
Preference number: 4 (lower is better)
Translates to: TSKRRVLNLVSSSDHRGCSAESS*VWKGEG
Trigger: CCCCTCACCCTTCCACACTCACGAACTCTCAGCCGA...GCAGCCTCTGTGGTCAGAGCTGGATACAAGATTCAAGACCCTTCTCTTGCTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000450849.7
ENST00000597739.1
ENST00000600960.1
CDS-3UTR TCA 90 bp GCCAGCGCACTGGATTTATCTTCCCGAATGACTTCTGAAACACTCAAACGCCCGCCAACCTGGAGCGGGTaGCAAGCAAGAGAAGGGTCT +
Preference number: 4 (lower is better)
Translates to: ASALDLSSRMTSETLKRPPTWSG*QAREGS
Trigger: AGACCCTTCTCTTGCTTGTCACCCGCTCCAGGTTGG...CGGGCGTTTGAGTGTTTCAGAAGTCATTCGGGAAGATAAATCCAGTGCGCTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
CDS-3UTR TCA 90 bp CTGACGCTGGGTTGGGGGAGCAGTGAGGTCCACATATCTCATTCCTTGGTGGGAAGGGGGCGGGTCAAATaGAAAACCATGGGTGTGAAA +
Preference number: 4 (lower is better)
Translates to: LTLGWGSSEVHISHSLVGRGRVK*KTMGVK
Trigger: TTTCACACCCATGGTTTTTCATTTGACCCGCCCCCT...TCCCACCAAGGAATGAGATATGTGGACCTCACTGCTCCCCCAACCCAGCGTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
CDS-3UTR TCA 90 bp GGATGCTGGGTTTCAGAGATGAACGGAGGGGCTGGCACCCTTGGAAGATTGGGAAGGGGGCGGGTCAAATaGAAAACCATGGGTGTGAAA +
Preference number: 4 (lower is better)
Translates to: GCWVSEMNGGAGTLGRLGRGRVK*KTMGVK
Trigger: TTTCACACCCATGGTTTTTCATTTGACCCGCCCCCT...TCCCAATCTTCCAAGGGTGCCAGCCCCTCCGTTCATCTCTGAAACCCAGCATCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
CDS-3UTR TCA 90 bp ATGAACGGAGGGGCTGGCACCCTTGGAAGATTGGGACTCAGGATGAGGCAGGATCCTCTCAGGTTTAAGTaGTTCTCATGCCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: MNGGAGTLGRLGLRMRQDPLRFK*FSCLSL
Trigger: GAGGCTGAGGCATGAGAATCACTTAAACCTGAGAGG...ATCCTGCCTCATCCTGAGTCCCAATCTTCCAAGGGTGCCAGCCCCTCCGTTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
CDS-3UTR TCA 90 bp GGATGCTGGGTTTCAGAGATGAACGGAGGGGCTGGCACCCTTGGAAGATTGGGAACTGGACGCTTTCACTaGGGCTCAGTTAATTGTGGG +
Preference number: 4 (lower is better)
Translates to: GCWVSEMNGGAGTLGRLGTGRFH*GSVNCG
Trigger: CCCACAATTAACTGAGCCTCAGTGAAAGCGTCCAGT...TCCCAATCTTCCAAGGGTGCCAGCCCCTCCGTTCATCTCTGAAACCCAGCATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR TCA 90 bp CTGACGCTGGGTTGGGGGAGCAGTGAGGTCCACATATCTCATTCCTTGGTGGGATGGAGGCTTGTTTCCTaGTCTTCTGAGACCAGAGCA +
Preference number: 4 (lower is better)
Translates to: LTLGWGSSEVHISHSLVGWRLVS*SSETRA
Trigger: TGCTCTGGTCTCAGAAGATCAGGAAACAAGCCTCCA...TCCCACCAAGGAATGAGATATGTGGACCTCACTGCTCCCCCAACCCAGCGTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600960.1
CDS-3UTR GCA 90 bp ACAAGCAAGAGAAGGGTCTTGAATCTTGTATCCAGCTCTGACCACAGAGGCTGCTGCCGTCCTCCGTCGTaGCGTCCCCAAATAGATCCG +
Preference number: 4 (lower is better)
Translates to: TSKRRVLNLVSSSDHRGCCRPPS*RPQIDP
Trigger: CGGATCTATTTGGGGACGGCACGACGGAGGACGGCA...GCAGCCTCTGTGGTCAGAGCTGGATACAAGATTCAAGACCCTTCTCTTGCTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000450849.7
ENST00000597739.1
ENST00000600960.1
CDS-3UTR GCA 90 bp ATGAACGGAGGGGCTGGCACCCTTGGAAGATTGGGACTCAGGATGAGGCAGGATTCTATACGGTGCTCTTaGTCCCCGATGATCACTGTC +
Preference number: 4 (lower is better)
Translates to: MNGGAGTLGRLGLRMRQDSIRCS*SPMITV
Trigger: GACAGTGATCATCGGGGAGCAAGAGCACCGTATAGA...ATCCTGCCTCATCCTGAGTCCCAATCTTCCAAGGGTGCCAGCCCCTCCGTTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000450849.7
ENST00000597739.1
ENST00000600960.1
CDS-3UTR GCA 90 bp ACCCAGCCACTTTTGTCATCTTGTGTTGGCTTTGGCAGCGACACCATTCACTGGTCGCCCAGGCTGGAATaGAGTGGCACGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: TQPLLSSCVGFGSDTIHWSPRLE*SGTILA
Trigger: AGCCAAGATCGTGCCACTGCATTCCAGCCTGGGCGA...CCAGTGAATGGTGTCGCTGCCAAAGCCAACACAAGATGACAAAAGTGGCTGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR GCA 90 bp GGATGCTGGGTTTCAGAGATGAACGGAGGGGCTGGCACCCTTGGAAGATTGGGACTTTTGAGTCAGTCTTaGTCTGTCTCCCAGGCTGGA +
Preference number: 4 (lower is better)
Translates to: GCWVSEMNGGAGTLGRLGLLSQS*SVSQAG
Trigger: TCCAGCCTGGGAGACAGAGCAAGACTGACTCAAAAG...TCCCAATCTTCCAAGGGTGCCAGCCCCTCCGTTCATCTCTGAAACCCAGCATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR CCA 90 bp GCCAGCGCACTGGATTTATCTTCCCGAATGACTTCTGAAACACTCAAACGCCCGCTTCTGGGAGTGGCCTaGGAAGATCTTCGTCCTGCC +
Preference number: 4 (lower is better)
Translates to: ASALDLSSRMTSETLKRPLLGVA*EDLRPA
Trigger: GGCAGGACGAAGATCTTCCCAGGCCACTCCCAGAAG...CGGGCGTTTGAGTGTTTCAGAAGTCATTCGGGAAGATAAATCCAGTGCGCTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
CDS-3UTR CCA 90 bp GTGACAAGCAAGAGAAGGGTCTTGAATCTTGTATCCAGCTCTGACCACAGAGGCGGGGAGGCTGCTGTCTaGAAGGAAGCAGGCTGCGAA +
Preference number: 4 (lower is better)
Translates to: VTSKRRVLNLVSSSDHRGGEAAV*KEAGCE
Trigger: TTCGCAGCCTGCTTCCTTCCAGACAGCAGCCTCCCC...GCCTCTGTGGTCAGAGCTGGATACAAGATTCAAGACCCTTCTCTTGCTTGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000450849.7
ENST00000597739.1
ENST00000600960.1
CDS-3UTR CCA 90 bp GGATGCTGGGTTTCAGAGATGAACGGAGGGGCTGGCACCCTTGGAAGATTGGGAATGAACCACGAGGGGTaGACGATGATCAAGGACTTC +
Preference number: 4 (lower is better)
Translates to: GCWVSEMNGGAGTLGRLGMNHEG*TMIKDF
Trigger: GAAGTCCTTGATCATCGTCCACCCCTCGTGGTTCAT...TCCCAATCTTCCAAGGGTGCCAGCCCCTCCGTTCATCTCTGAAACCCAGCATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000450849.7
ENST00000597739.1
ENST00000600960.1
CDS-3UTR CCA 90 bp GATGAGATCTGGGGCCAGTGGGCGTCTGACAGAGGTTTTCTGGCATCTGGAATCACGCAGTCTGGGATCTaGACGTGTTCCATAGGGATG +
Preference number: 4 (lower is better)
Translates to: DEIWGQWASDRGFLASGITQSGI*TCSIGM
Trigger: CATCCCTATGGAACACGTCCAGATCCCAGACTGCGT...GATTCCAGATGCCAGAAAACCTCTGTCAGACGCCCACTGGCCCCAGATCTCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000450849.7
ENST00000597739.1
ENST00000600960.1
CDS-3UTR CCA 90 bp ACCCTGATACAAATCCATCTCAAAGCCCATCTGTGGACGGTGCAGGTCGTGGCCTTGCAGGACGCAGTCTaGGATCTGGACGTGTTCCAT +
Preference number: 4 (lower is better)
Translates to: TLIQIHLKAHLWTVQVVALQDAV*DLDVFH
Trigger: ATGGAACACGTCCAGATCCCAGACTGCGTCCTGCAA...GGCCACGACCTGCACCGTCCACAGATGGGCTTTGAGATGGATTTGTATCAGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR CCA 90 bp CTGACGCTGGGTTGGGGGAGCAGTGAGGTCCACATATCTCATTCCTTGGTGGGAGTGAGCCATCGTGCCTaGCCCAGCCTTTTCTTAAAT +
Preference number: 4 (lower is better)
Translates to: LTLGWGSSEVHISHSLVGVSHRA*PSLFLN
Trigger: ATTTAAGAAAAGGCTGGGCCAGGCACGATGGCTCAC...TCCCACCAAGGAATGAGATATGTGGACCTCACTGCTCCCCCAACCCAGCGTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
CDS-3UTR CCA 90 bp GTCCGATTGGGTGGAATGAGTTCTTTCCTGTCCCCGTCTCCTGTCTGTGACTTGACAAATCGTGGCAGCTaGGCCTGGCTGGCATCTATC +
Preference number: 4 (lower is better)
Translates to: VRLGGMSSFLSPSPVCDLTNRGS*AWLASI
Trigger: GATAGATGCCAGCCAGGCCCAGCTGCCACGATTTGT...CAAGTCACAGACAGGAGACGGGGACAGGAAAGAACTCATTCCACCCAATCGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR CCA 90 bp GCCAGCGCACTGGATTTATCTTCCCGAATGACTTCTGAAACACTCAAACGCCCGCTCCTGTCTGTGACTTaGAAGCGGCCCCAGTCTTCC +
Preference number: 4 (lower is better)
Translates to: ASALDLSSRMTSETLKRPLLSVT*KRPQSS
Trigger: GGAAGACTGGGGCCGCTTCCAAGTCACAGACAGGAG...CGGGCGTTTGAGTGTTTCAGAAGTCATTCGGGAAGATAAATCCAGTGCGCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450849.7
3UTR CAA 72 bp TCCAACCTGGAGCGGGTGACAAGCAAGAGAAGGGTCTaGAATCTTGTATCCAGCTCTGACCACAGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: SNLERVTSKRRV*NLVSSSDHRGC
Trigger: GCAGCCTCTGTGGTCAGAGCTGGATACAAGATTCAAGACCCTTCTCTTGCTTGTCACCCGCTCCAGGTTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000450849.7
ENST00000597739.1
ENST00000600960.1
3UTR CAA 72 bp GCAGTCTGGGATCTGGACGTGTTCCATAGGGATGAGTaGCTCCAGGTCTTCCAAGCTGTGCACGTACTGGAT +
Preference number: 4 (lower is better)
Translates to: AVWDLDVFHRDE*LQVFQAVHVLD
Trigger: ATCCAGTACGTGCACAGCTTGGAAGACCTGGAGCAACTCATCCCTATGGAACACGTCCAGATCCCAGACTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597739.1
CDS-3UTR TCA 90 bp TGGGGGAGCAGTGAGGTCCACATATCTCATTCCTTGGTGGGAGGTATTGACGGGAGGGACCCCTCACTCTaGTCCAGAGAAATGTTGATC +
Preference number: 4 (lower is better)
Translates to: WGSSEVHISHSLVGGIDGRDPSL*SREMLI
Trigger: GATCAACATTTCTCTGGATCAGAGTGAGGGGTCCCT...CCCGTCAATACCTCCCACCAAGGAATGAGATATGTGGACCTCACTGCTCCCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
CDS-3UTR TCA 90 bp TCCTCTTCGTATTGCAGGACGCAGTCTGGGATCTGGACGTGTTCCATAGGGATGGGAAGAGGTTCTCCATaGTGTAGTGGTAGTCGGGGA +
Preference number: 4 (lower is better)
Translates to: SSSYCRTQSGIWTCSIGMGRGSP*CSGSRG
Trigger: TCCCCGACTACCACTACATCATGGAGAACCTCTTCC...CATCCCTATGGAACACGTCCAGATCCCAGACTGCGTCCTGCAATACGAAGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597739.1
CDS-3UTR TCA 90 bp CTTCTGGGTCAGGTAGGGCCTCACTTGTCACTTGATTGCTGCTGTAGACACTCATTGGGGGAGGGTTTATaGCGCATCCCATGTGTCACC +
Preference number: 4 (lower is better)
Translates to: LLGQVGPHLSLDCCCRHSLGEGL*RIPCVT
Trigger: GGTGACACATGGGATGCGTCATAAACCCTCCCCCAA...TGAGTGTCTACAGCAGCAATCAAGTGACAAGTGAGGCCCTACCTGACCCAGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR GCA 90 bp GTCCGATTGGGTGGAATGAGTTCTTTCCTGTCCCCGTCTCCTGTCTGTGACTTGGGAAGATCTTCGTCCTaGCATTCCTCCTTCACGTCC +
Preference number: 4 (lower is better)
Translates to: VRLGGMSSFLSPSPVCDLGRSSS*HSSFTS
Trigger: GGACGTGAAGGAGGAATGGCAGGACGAAGATCTTCC...CAAGTCACAGACAGGAGACGGGGACAGGAAAGAACTCATTCCACCCAATCGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR GCA 90 bp GCCAGCGCACTGGATTTATCTTCCCGAATGACTTCTGAAACACTCAAACGCCCGCCCACTCCAGTTCGTTaGCATTCCCCAGGAACTCCA +
Preference number: 4 (lower is better)
Translates to: ASALDLSSRMTSETLKRPPTPVR*HSPGTP
Trigger: TGGAGTTCCTGGGGAATGGCAACGAACTGGAGTGGG...CGGGCGTTTGAGTGTTTCAGAAGTCATTCGGGAAGATAAATCCAGTGCGCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
CDS-3UTR GCA 90 bp ACAAGCAAGAGAAGGGTCTTGAATCTTGTATCCAGCTCTGACCACAGAGGCTGCACCCCCTGCGCTTCTTaGCTTCCTCGGCTGAGAGTT +
Preference number: 4 (lower is better)
Translates to: TSKRRVLNLVSSSDHRGCTPCAS*LPRLRV
Trigger: AACTCTCAGCCGAGGAAGGCAAGAAGCGCAGGGGGT...GCAGCCTCTGTGGTCAGAGCTGGATACAAGATTCAAGACCCTTCTCTTGCTTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000450849.7
ENST00000597739.1
ENST00000600960.1
CDS-3UTR CCA 90 bp GCCAGCGCACTGGATTTATCTTCCCGAATGACTTCTGAAACACTCAAACGCCCGGAGATCTGGGGCCAGTaGGCGTCTGACAGAGGTTTT +
Preference number: 4 (lower is better)
Translates to: ASALDLSSRMTSETLKRPEIWGQ*ASDRGF
Trigger: AAAACCTCTGTCAGACGCCCACTGGCCCCAGATCTC...CGGGCGTTTGAGTGTTTCAGAAGTCATTCGGGAAGATAAATCCAGTGCGCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
CDS-3UTR CCA 90 bp ACCCAGCCACTTTTGTCATCTTGTGTTGGCTTTGGCAGCGACACCATTCACTGGAGGGGCTGGCACCCTTaGAAGATTGGGACTCAGGAT +
Preference number: 4 (lower is better)
Translates to: TQPLLSSCVGFGSDTIHWRGWHP*KIGTQD
Trigger: ATCCTGAGTCCCAATCTTCCAAGGGTGCCAGCCCCT...CCAGTGAATGGTGTCGCTGCCAAAGCCAACACAAGATGACAAAAGTGGCTGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR CCA 90 bp ATGAACGGAGGGGCTGGCACCCTTGGAAGATTGGGACTCAGGATGAGGCAGGATGCTCTTCTTGTGCAATaGGCTCTGATCCTCTCAAAG +
Preference number: 4 (lower is better)
Translates to: MNGGAGTLGRLGLRMRQDALLVQ*ALILSK
Trigger: CTTTGAGAGGATCAGAGCCCATTGCACAAGAAGAGC...ATCCTGCCTCATCCTGAGTCCCAATCTTCCAAGGGTGCCAGCCCCTCCGTTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
CDS-3UTR CCA 90 bp CTGACGCTGGGTTGGGGGAGCAGTGAGGTCCACATATCTCATTCCTTGGTGGGAGCTCTTCTTGTGCAATaGGCTCTGATCCTCTCAAAG +
Preference number: 4 (lower is better)
Translates to: LTLGWGSSEVHISHSLVGALLVQ*ALILSK
Trigger: CTTTGAGAGGATCAGAGCCCATTGCACAAGAAGAGC...TCCCACCAAGGAATGAGATATGTGGACCTCACTGCTCCCCCAACCCAGCGTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
CDS-3UTR CCA 90 bp GCCAGCGCACTGGATTTATCTTCCCGAATGACTTCTGAAACACTCAAACGCCCGGAGGACAAGGATGGTTaGCAGCGGCTCTTCTTGTGC +
Preference number: 4 (lower is better)
Translates to: ASALDLSSRMTSETLKRPEDKDG*QRLFLC
Trigger: GCACAAGAAGAGCCGCTGCCAACCATCCTTGTCCTC...CGGGCGTTTGAGTGTTTCAGAAGTCATTCGGGAAGATAAATCCAGTGCGCTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
CDS-3UTR CCA 90 bp GGATGCTGGGTTTCAGAGATGAACGGAGGGGCTGGCACCCTTGGAAGATTGGGAACATATCTCATTCCTTaGTGGGAGGTATTGACGGGG +
Preference number: 4 (lower is better)
Translates to: GCWVSEMNGGAGTLGRLGTYLIP*WEVLTG
Trigger: CCCCGTCAATACCTCCCACCAAGGAATGAGATATGT...TCCCAATCTTCCAAGGGTGCCAGCCCCTCCGTTCATCTCTGAAACCCAGCATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
CDS-3UTR CCA 90 bp GTGACAAGCAAGAGAAGGGTCTTGAATCTTGTATCCAGCTCTGACCACAGAGGCCTGGTTGGCCCAGCCTaGATAGCACTTGCTGAGAGG +
Preference number: 4 (lower is better)
Translates to: VTSKRRVLNLVSSSDHRGLVGPA*IALAER
Trigger: CCTCTCAGCAAGTGCTATCCAGGCTGGGCCAACCAG...GCCTCTGTGGTCAGAGCTGGATACAAGATTCAAGACCCTTCTCTTGCTTGTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR CCA 90 bp GTCCGATTGGGTGGAATGAGTTCTTTCCTGTCCCCGTCTCCTGTCTGTGACTTGCAGGTCAAGATGCACTaGACGCTTTCACTGAGGCTC +
Preference number: 4 (lower is better)
Translates to: VRLGGMSSFLSPSPVCDLQVKMH*TLSLRL
Trigger: GAGCCTCAGTGAAAGCGTCCAGTGCATCTTGACCTG...CAAGTCACAGACAGGAGACGGGGACAGGAAAGAACTCATTCCACCCAATCGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR CCA 90 bp CTGACGCTGGGTTGGGGGAGCAGTGAGGTCCACATATCTCATTCCTTGGTGGGAGCAATCTCTGCCTCCTaGGTTCCAGCTATTCTTCTA +
Preference number: 4 (lower is better)
Translates to: LTLGWGSSEVHISHSLVGAISAS*VPAILL
Trigger: TAGAAGAATAGCTGGAACCCAGGAGGCAGAGATTGC...TCCCACCAAGGAATGAGATATGTGGACCTCACTGCTCCCCCAACCCAGCGTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR CCA 90 bp ACCCAGCCACTTTTGTCATCTTGTGTTGGCTTTGGCAGCGACACCATTCACTGGGGAGCTGCGTGCCTTTaGTCACCTGGGACAAATCGT +
Preference number: 4 (lower is better)
Translates to: TQPLLSSCVGFGSDTIHWGAACL*SPGTNR
Trigger: ACGATTTGTCCCAGGTGACCAAAGGCACGCAGCTCC...CCAGTGAATGGTGTCGCTGCCAAAGCCAACACAAGATGACAAAAGTGGCTGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR CCA 90 bp GATGAGATCTGGGGCCAGTGGGCGTCTGACAGAGGTTTTCTGGCATCTGGAATCGTGCAAAGCAATTCCTaGCTGGGAAGATCTTCGTCC +
Preference number: 4 (lower is better)
Translates to: DEIWGQWASDRGFLASGIVQSNS*LGRSSS
Trigger: GGACGAAGATCTTCCCAGCCAGGAATTGCTTTGCAC...GATTCCAGATGCCAGAAAACCTCTGTCAGACGCCCACTGGCCCCAGATCTCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597739.1
3UTR CAA 72 bp GCCGGCAGGCACCTTCTGGGTCAGGTAGGGCCTCACTaGTCACTTGATTGCTGCTGTAGACACTCAATTATT +
Preference number: 4 (lower is better)
Translates to: AGRHLLGQVGPH*SLDCCCRHSII
Trigger: AATAATTGAGTGTCTACAGCAGCAATCAAGTGACAAGTGAGGCCCTACCTGACCCAGAAGGTGCCTGCCGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR TCA 90 bp AGGAACTCCAGCGAGTCGGTCTCATCGGGGGTCTCGATGTCATCCACGTTAATATACGATGCGCTCCGTTaGAATTTAGCGTGTTGGGAG +
Preference number: 4 (lower is better)
Translates to: RNSSESVSSGVSMSSTLIYDALR*NLACWE
Trigger: CTCCCAACACGCTAAATTTCAACGGAGCGCATCGTA...TATTAACGTGGATGACATCGAGACCCCCGATGAGACCGACTCGCTGGAGTTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597739.1
CDS-3UTR TCA 90 bp GCAGTTCTTGTCACTGTTGGGTTAGAACGATTCATGCTGGAGCTGCGTGCCTTTGATTGGGACTCAGGATaGGGCAGGATGAGATCTGGG +
Preference number: 4 (lower is better)
Translates to: AVLVTVGLERFMLELRAFDWDSG*GRMRSG
Trigger: CCCAGATCTCATCCTGCCTCATCCTGAGTCCCAATC...AAAGGCACGCAGCTCCAGCATGAATCGTTCTAACCCAACAGTGACAAGAACTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR TCA 90 bp TGGGGGAGCAGTGAGGTCCACATATCTCATTCCTTGGTGGGAGGTATTGACGGGGCAAGAGAAGGGTCTTaGATCTTGTATCCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: WGSSEVHISHSLVGGIDGAREGS*ILYPAL
Trigger: CAGAGCTGGATACAAGATTCAAGACCCTTCTCTTGC...CCCGTCAATACCTCCCACCAAGGAATGAGATATGTGGACCTCACTGCTCCCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
CDS-3UTR TCA 90 bp TTCGCCTGCCTGTTGTCTGTGACTGCTGGTGATCCAAAGGGGCGTGGGTGGGCCATTTATCTTCCCGAATaGCTTCTGAAACACTCAAAC +
Preference number: 4 (lower is better)
Translates to: FACLLSVTAGDPKGRGWAIYLPE*LLKHSN
Trigger: GTTTGAGTGTTTCAGAAGTCATTCGGGAAGATAAAT...GGCCCACCCACGCCCCTTTGGATCACCAGCAGTCACAGACAACAGGCAGGCGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR TCA 90 bp ACCCAGCCACTTTTGTCATCTTGTGTTGGCTTTGGCAGCGACACCATTCACTGGCTGGATAGCACTTGCTaGGAGGTCAACCACAGAGCT +
Preference number: 4 (lower is better)
Translates to: TQPLLSSCVGFGSDTIHWLDSTC*EVNHRA
Trigger: AGCTCTGTGGTTGACCTCTCAGCAAGTGCTATCCAG...CCAGTGAATGGTGTCGCTGCCAAAGCCAACACAAGATGACAAAAGTGGCTGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR GCA 90 bp GAATGTTCTAGATTACTGGGGTGTCATTTTGCAATCGGAGGACAAGGATGGTTGCGCAGGGGCGGATTCTaGATCCGAGGAAGGTCACCC +
Preference number: 4 (lower is better)
Translates to: ECSRLLGCHFAIGGQGWLRRGGF*IRGRSP
Trigger: GGGTGACCTTCCTCGGATGCAGAATCCGCCCCTGCG...CAACCATCCTTGTCCTCCGATTGCAAAATGACACCCCAGTAATCTAGAACATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR CCA 90 bp ACAAGCAAGAGAAGGGTCTTGAATCTTGTATCCAGCTCTGACCACAGAGGCTGCCGTCTCTTCTGGGAGTaGCCTGGGAAGATCTTCGTC +
Preference number: 4 (lower is better)
Translates to: TSKRRVLNLVSSSDHRGCRLFWE*PGKIFV
Trigger: GACGAAGATCTTCCCAGGCCACTCCCAGAAGAGACG...GCAGCCTCTGTGGTCAGAGCTGGATACAAGATTCAAGACCCTTCTCTTGCTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
CDS-3UTR CCA 90 bp CAGGTAGGGCCTCACTTGTCACTTGATTGCTGCTGTAGACACTCAATTATTAGGCACCCCCGTCTCTTCTaGGAGTGGCCTGGGAAGATC +
Preference number: 4 (lower is better)
Translates to: QVGPHLSLDCCCRHSIIRHPRLF*EWPGKI
Trigger: GATCTTCCCAGGCCACTCCCAGAAGAGACGGGGGTG...CCTAATAATTGAGTGTCTACAGCAGCAATCAAGTGACAAGTGAGGCCCTACCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR CCA 90 bp CTGGGTGTCATTATGAGCGAGAAGGGGGCGGGTCAAATGAAAAACCATGGGTGTTTGCAGGACGCAGTCTaGGATCTGGACGTGTTCCAT +
Preference number: 4 (lower is better)
Translates to: LGVIMSEKGAGQMKNHGCLQDAV*DLDVFH
Trigger: ATGGAACACGTCCAGATCCCAGACTGCGTCCTGCAA...ACACCCATGGTTTTTCATTTGACCCGCCCCCTTCTCGCTCATAATGACACCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
CDS-3UTR CCA 90 bp AGTCTTTCCTCTTCGTATTGCAGGACGCAGTCTGGGATCTGGACGTGTTCCATAGCTTCTCTTCAGACCTaGGCAGCACAAACTCCGGCT +
Preference number: 4 (lower is better)
Translates to: SLSSSYCRTQSGIWTCSIASLQT*AAQTPA
Trigger: AGCCGGAGTTTGTGCTGCCCAGGTCTGAAGAGAAGC...TATGGAACACGTCCAGATCCCAGACTGCGTCCTGCAATACGAAGAGGAAAGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597739.1
CDS-3UTR CCA 90 bp GTGACAAGCAAGAGAAGGGTCTTGAATCTTGTATCCAGCTCTGACCACAGAGGCAGGGGCTGGCACCCTTaGAAGATTGGGACTCAGGAT +
Preference number: 4 (lower is better)
Translates to: VTSKRRVLNLVSSSDHRGRGWHP*KIGTQD
Trigger: ATCCTGAGTCCCAATCTTCCAAGGGTGCCAGCCCCT...GCCTCTGTGGTCAGAGCTGGATACAAGATTCAAGACCCTTCTCTTGCTTGTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000450849.7
ENST00000597739.1
ENST00000600960.1
CDS-3UTR CCA 90 bp TGGGGGAGCAGTGAGGTCCACATATCTCATTCCTTGGTGGGAGGTATTGACGGGAGCTGGGCCCTTTTCTaGAACGCACAAATACTGCAT +
Preference number: 4 (lower is better)
Translates to: WGSSEVHISHSLVGGIDGSWALF*NAQILH
Trigger: ATGCAGTATTTGTGCGTTCCAGAAAAGGGCCCAGCT...CCCGTCAATACCTCCCACCAAGGAATGAGATATGTGGACCTCACTGCTCCCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
CDS-3UTR CCA 90 bp ACCCAGCCACTTTTGTCATCTTGTGTTGGCTTTGGCAGCGACACCATTCACTGGTCTGAGGCCGCATTCTaGAGGGAAAGGCACAGGAAA +
Preference number: 4 (lower is better)
Translates to: TQPLLSSCVGFGSDTIHWSEAAF*RERHRK
Trigger: TTTCCTGTGCCTTTCCCTCCAGAATGCGGCCTCAGA...CCAGTGAATGGTGTCGCTGCCAAAGCCAACACAAGATGACAAAAGTGGCTGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR CCA 90 bp ACCCAGCCACTTTTGTCATCTTGTGTTGGCTTTGGCAGCGACACCATTCACTGGATCGGAGGACAAGGATaGTTGGCAGCGGCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: TQPLLSSCVGFGSDTIHWIGGQG*LAAALL
Trigger: AAGAAGAGCCGCTGCCAACCATCCTTGTCCTCCGAT...CCAGTGAATGGTGTCGCTGCCAAAGCCAACACAAGATGACAAAAGTGGCTGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR CCA 90 bp ATGAACGGAGGGGCTGGCACCCTTGGAAGATTGGGACTCAGGATGAGGCAGGATTATCTCATTCCTTGGTaGGAGGTATTGACGGGGTTT +
Preference number: 4 (lower is better)
Translates to: MNGGAGTLGRLGLRMRQDYLIPW*EVLTGF
Trigger: AAACCCCGTCAATACCTCCCACCAAGGAATGAGATA...ATCCTGCCTCATCCTGAGTCCCAATCTTCCAAGGGTGCCAGCCCCTCCGTTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
CDS-3UTR CCA 90 bp TGGGGGAGCAGTGAGGTCCACATATCTCATTCCTTGGTGGGAGGTATTGACGGGGAGGTTTCACCATGTTaGCCAGGCTGTTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: WGSSEVHISHSLVGGIDGEVSPC*PGCSQT
Trigger: AGTTTGAGAACAGCCTGGCCAACATGGTGAAACCTC...CCCGTCAATACCTCCCACCAAGGAATGAGATATGTGGACCTCACTGCTCCCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
CDS-3UTR CCA 90 bp ACAAGCAAGAGAAGGGTCTTGAATCTTGTATCCAGCTCTGACCACAGAGGCTGCGCAGTGGCACGATCTTaGCTCACTGTAACCTCTGCC +
Preference number: 4 (lower is better)
Translates to: TSKRRVLNLVSSSDHRGCAVARS*LTVTSA
Trigger: GGCAGAGGTTACAGTGAGCCAAGATCGTGCCACTGC...GCAGCCTCTGTGGTCAGAGCTGGATACAAGATTCAAGACCCTTCTCTTGCTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
CDS-3UTR CCA 90 bp AAGAACCCGCTGGTCCAAGCTTTGAATGCAGGTGGCTGCGGCCAGCGCACTGGAAGTTCTTGTCACTGTTaGGTTAGAACGATTCATGCT +
Preference number: 4 (lower is better)
Translates to: KNPLVQALNAGGCGQRTGSSCHC*VRTIHA
Trigger: AGCATGAATCGTTCTAACCCAACAGTGACAAGAACT...TCCAGTGCGCTGGCCGCAGCCACCTGCATTCAAAGCTTGGACCAGCGGGTTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR CCA 90 bp GCTGCTGATGACGTACAGGAAGAGGTTCTCCATGATGTAGTGGTAGTCGGGGAGAAAGCAATTCCTGGCTaGGAAGATCTTCGTCCTGCC +
Preference number: 4 (lower is better)
Translates to: AADDVQEEVLHDVVVVGEKAIPG*EDLRPA
Trigger: GGCAGGACGAAGATCTTCCCAGCCAGGAATTGCTTT...CTCCCCGACTACCACTACATCATGGAGAACCTCTTCCTGTACGTCATCAGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597739.1
CDS-3UTR TCA 90 bp GCCAGCGCACTGGATTTATCTTCCCGAATGACTTCTGAAACACTCAAACGCCCGACGAGGGGTGGACGATaGTCAAGGACTTCAGGTTTT +
Preference number: 4 (lower is better)
Translates to: ASALDLSSRMTSETLKRPTRGGR*SRTSGF
Trigger: AAAACCTGAAGTCCTTGATCATCGTCCACCCCTCGT...CGGGCGTTTGAGTGTTTCAGAAGTCATTCGGGAAGATAAATCCAGTGCGCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
CDS-3UTR TCA 90 bp GAATGTTCTAGATTACTGGGGTGTCATTTTGCAATCGGAGGACAAGGATGGTTGGGGCCAGTGGGCGTCTaGCAGAGGTTTTCTGGCATC +
Preference number: 4 (lower is better)
Translates to: ECSRLLGCHFAIGGQGWLGPVGV*QRFSGI
Trigger: GATGCCAGAAAACCTCTGTCAGACGCCCACTGGCCC...CAACCATCCTTGTCCTCCGATTGCAAAATGACACCCCAGTAATCTAGAACATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
CDS-3UTR TCA 90 bp ACAAGCAAGAGAAGGGTCTTGAATCTTGTATCCAGCTCTGACCACAGAGGCTGCTTCAGAGCCAGTTTCTaGGCCTCTGCTGTTCCAACC +
Preference number: 4 (lower is better)
Translates to: TSKRRVLNLVSSSDHRGCFRASF*ASAVPT
Trigger: GGTTGGAACAGCAGAGGCTCAGAAACTGGCTCTGAA...GCAGCCTCTGTGGTCAGAGCTGGATACAAGATTCAAGACCCTTCTCTTGCTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
CDS-3UTR TCA 90 bp GCCAGCGCACTGGATTTATCTTCCCGAATGACTTCTGAAACACTCAAACGCCCGCCTCTCAGGTTTAAGTaGTTCTCATGCCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: ASALDLSSRMTSETLKRPPLRFK*FSCLSL
Trigger: GAGGCTGAGGCATGAGAATCACTTAAACCTGAGAGG...CGGGCGTTTGAGTGTTTCAGAAGTCATTCGGGAAGATAAATCCAGTGCGCTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
CDS-3UTR GCA 90 bp GTGACAAGCAAGAGAAGGGTCTTGAATCTTGTATCCAGCTCTGACCACAGAGGCGGAAGATCTTCGTCCTaGCATTCCTCCTTCACGTCC +
Preference number: 4 (lower is better)
Translates to: VTSKRRVLNLVSSSDHRGGRSSS*HSSFTS
Trigger: GGACGTGAAGGAGGAATGGCAGGACGAAGATCTTCC...GCCTCTGTGGTCAGAGCTGGATACAAGATTCAAGACCCTTCTCTTGCTTGTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000450849.7
ENST00000597739.1
ENST00000600960.1
CDS-3UTR GCA 90 bp GCCAGCGCACTGGATTTATCTTCCCGAATGACTTCTGAAACACTCAAACGCCCGCCATGTCCTTTGTTATaGTCACGTCGCCTCAGGACA +
Preference number: 4 (lower is better)
Translates to: ASALDLSSRMTSETLKRPPCPLL*SRRLRT
Trigger: TGTCCTGAGGCGACGTGAGCATAACAAAGGACATGG...CGGGCGTTTGAGTGTTTCAGAAGTCATTCGGGAAGATAAATCCAGTGCGCTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
CDS-3UTR GCA 90 bp GCAGTTCTTGTCACTGTTGGGTTAGAACGATTCATGCTGGAGCTGCGTGCCTTTCAGTTTCTGAGCCTCTaGTGTTCCAACCCGGAACAG +
Preference number: 4 (lower is better)
Translates to: AVLVTVGLERFMLELRAFQFLSL*CSNPEQ
Trigger: CTGTTCCGGGTTGGAACAGCAGAGGCTCAGAAACTG...AAAGGCACGCAGCTCCAGCATGAATCGTTCTAACCCAACAGTGACAAGAACTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR GCA 90 bp TGGGGGAGCAGTGAGGTCCACATATCTCATTCCTTGGTGGGAGGTATTGACGGGGCTCACTGTAACCTCTaGCTCTCAGGTTTAAGTGAT +
Preference number: 4 (lower is better)
Translates to: WGSSEVHISHSLVGGIDGAHCNL*LSGLSD
Trigger: ATCACTTAAACCTGAGAGGCAGAGGTTACAGTGAGC...CCCGTCAATACCTCCCACCAAGGAATGAGATATGTGGACCTCACTGCTCCCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
CDS-3UTR CCA 90 bp CTTTGTTATGCTCACGTCGCCTCAGGACATGAACGTGACTTAGGGTTGGAACTTGCTTCTCTTCAGACCTaGGCAGCACAAACTCCGGCT +
Preference number: 4 (lower is better)
Translates to: LCYAHVASGHERDLGLELASLQT*AAQTPA
Trigger: AGCCGGAGTTTGTGCTGCCCAGGTCTGAAGAGAAGC...AAGTTCCAACCCTAAGTCACGTTCATGTCCTGAGGCGACGTGAGCATAACAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600960.1
CDS-3UTR CCA 90 bp ACCCTGATACAAATCCATCTCAAAGCCCATCTGTGGACGGTGCAGGTCGTGGCCCCCTGCCATCATCGTTaGAATAACCCCAAATGCAAT +
Preference number: 4 (lower is better)
Translates to: TLIQIHLKAHLWTVQVVAPCHHR*NNPKCN
Trigger: ATTGCATTTGGGGTTATTCCAACGATGATGGCAGGG...GGCCACGACCTGCACCGTCCACAGATGGGCTTTGAGATGGATTTGTATCAGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450849.7
3UTR CAA 72 bp GGGCTTGAGAATGTTCTAGATTACTGGGGTGTCATTTaGCAATCGGAGGACAAGGATGGTTGGCAGCGGCTC +
Preference number: 4 (lower is better)
Translates to: GLENVLDYWGVI*QSEDKDGWQRL
Trigger: GAGCCGCTGCCAACCATCCTTGTCCTCCGATTGCAAAATGACACCCCAGTAATCTAGAACATTCTCAAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
3UTR CAA 72 bp TGCTCCAGGTCTTCCAAGCTGTGCACGTACTGGATCTaGTTGATGAACTTGACGCTGATGAAAGGGCGAGAG +
Preference number: 4 (lower is better)
Translates to: CSRSSKLCTYWI*LMNLTLMKGRE
Trigger: CTCTCGCCCTTTCATCAGCGTCAAGTTCATCAACAAGATCCAGTACGTGCACAGCTTGGAAGACCTGGAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597739.1
CDS-3UTR TCA 90 bp GTCTCGATGTCATCCACGTTAATATCCAGGTCATCAGGGGTATCCAAGAAGTCAGATCCAGAGAAATGTTaGTCTCTGGGGCCACCAGCG +
Preference number: 4 (lower is better)
Translates to: VSMSSTLISRSSGVSKKSDPEKC*SLGPPA
Trigger: CGCTGGTGGCCCCAGAGATCAACATTTCTCTGGATC...TGACTTCTTGGATACCCCTGATGACCTGGATATTAACGTGGATGACATCGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597739.1
CDS-3UTR TCA 90 bp CTTTGTTATGCTCACGTCGCCTCAGGACATGAACGTGACTTAGGGTTGGAACTTGGAAGAGGTTCTCCATaGTGTAGTGGTAGTCGGGGA +
Preference number: 4 (lower is better)
Translates to: LCYAHVASGHERDLGLELGRGSP*CSGSRG
Trigger: TCCCCGACTACCACTACATCATGGAGAACCTCTTCC...AAGTTCCAACCCTAAGTCACGTTCATGTCCTGAGGCGACGTGAGCATAACAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600960.1
CDS-3UTR TCA 90 bp ACCCAGCCACTTTTGTCATCTTGTGTTGGCTTTGGCAGCGACACCATTCACTGGGACATGCTTGTTTCCTaGTCTTCTGAGACCAGAGCA +
Preference number: 4 (lower is better)
Translates to: TQPLLSSCVGFGSDTIHWDMLVS*SSETRA
Trigger: TGCTCTGGTCTCAGAAGATCAGGAAACAAGCATGTC...CCAGTGAATGGTGTCGCTGCCAAAGCCAACACAAGATGACAAAAGTGGCTGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR TCA 90 bp CTTTGTTATGCTCACGTCGCCTCAGGACATGAACGTGACTTAGGGTTGGAACTTTTGTGCAATGGGCTCTaGTCCTCTCAAAGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: LCYAHVASGHERDLGLELLCNGL*SSQRSW
Trigger: CCAGCTCCTTTGAGAGGATCAGAGCCCATTGCACAA...AAGTTCCAACCCTAAGTCACGTTCATGTCCTGAGGCGACGTGAGCATAACAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600960.1
CDS-3UTR GCA 90 bp GTCTCGATGTCATCCACGTTAATATCCAGGTCATCAGGGGTATCCAAGAAGTCACCCACTCCAGTTCGTTaGCATTCCCCAGGAACTCCA +
Preference number: 4 (lower is better)
Translates to: VSMSSTLISRSSGVSKKSPTPVR*HSPGTP
Trigger: TGGAGTTCCTGGGGAATGGCAACGAACTGGAGTGGG...TGACTTCTTGGATACCCCTGATGACCTGGATATTAACGTGGATGACATCGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597739.1
CDS-3UTR GCA 90 bp CAGTCTTTCCTCTTCGTATTGCAGGACGCAGTCTGGGATCTGGACGTGTTCCATAGGTCTTCCAAGCTGTaGACGTACTGGATCTTGTTG +
Preference number: 4 (lower is better)
Translates to: QSFLFVLQDAVWDLDVFHRSSKL*TYWILL
Trigger: CAACAAGATCCAGTACGTGCACAGCTTGGAAGACCT...ATGGAACACGTCCAGATCCCAGACTGCGTCCTGCAATACGAAGAGGAAAGACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597739.1
CDS-3UTR GCA 90 bp CAGGTAGGGCCTCACTTGTCACTTGATTGCTGCTGTAGACACTCAATTATTAGGTTGAATGCAGGTGGCTaGGGCCAGCGCACTGGATTT +
Preference number: 4 (lower is better)
Translates to: QVGPHLSLDCCCRHSIIRLNAGG*GQRTGF
Trigger: AAATCCAGTGCGCTGGCCGCAGCCACCTGCATTCAA...CCTAATAATTGAGTGTCTACAGCAGCAATCAAGTGACAAGTGAGGCCCTACCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR GCA 90 bp GAATGTTCTAGATTACTGGGGTGTCATTTTGCAATCGGAGGACAAGGATGGTTGTCGCCCAGGCTGGAATaGAGTGGCACGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: ECSRLLGCHFAIGGQGWLSPRLE*SGTILA
Trigger: AGCCAAGATCGTGCCACTGCATTCCAGCCTGGGCGA...CAACCATCCTTGTCCTCCGATTGCAAAATGACACCCCAGTAATCTAGAACATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
CDS-3UTR CCA 90 bp ACCAGTGATCCGCATTTGGACCACATTAGAAAAGTCTGTCTTCTTTTTCCTAGGTTTCCATCCGGAGCGTaGCTTCGGTGGTCCCCATGG +
Preference number: 4 (lower is better)
Translates to: TSDPHLDHIRKVCLLFPRFPSGA*LRWSPW
Trigger: CCATGGGGACCACCGAAGCCACGCTCCGGATGGAAA...CCTAGGAAAAAGAAGACAGACTTTTCTAATGTGGTCCAAATGCGGATCACTGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR CCA 90 bp ACAAGCAAGAGAAGGGTCTTGAATCTTGTATCCAGCTCTGACCACAGAGGCTGCATGAACCACGAGGGGTaGACGATGATCAAGGACTTC +
Preference number: 4 (lower is better)
Translates to: TSKRRVLNLVSSSDHRGCMNHEG*TMIKDF
Trigger: GAAGTCCTTGATCATCGTCCACCCCTCGTGGTTCAT...GCAGCCTCTGTGGTCAGAGCTGGATACAAGATTCAAGACCCTTCTCTTGCTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000450849.7
ENST00000597739.1
ENST00000600960.1
CDS-3UTR CCA 90 bp GCCAGCGCACTGGATTTATCTTCCCGAATGACTTCTGAAACACTCAAACGCCCGAGCTGGGCCCTTTTCTaGAACGCACAAATACTGCAT +
Preference number: 4 (lower is better)
Translates to: ASALDLSSRMTSETLKRPSWALF*NAQILH
Trigger: ATGCAGTATTTGTGCGTTCCAGAAAAGGGCCCAGCT...CGGGCGTTTGAGTGTTTCAGAAGTCATTCGGGAAGATAAATCCAGTGCGCTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
CDS-3UTR CCA 90 bp GCAGTTCTTGTCACTGTTGGGTTAGAACGATTCATGCTGGAGCTGCGTGCCTTTGTGAGCCATCGTGCCTaGCCCAGCCTTTTCTTAAAT +
Preference number: 4 (lower is better)
Translates to: AVLVTVGLERFMLELRAFVSHRA*PSLFLN
Trigger: ATTTAAGAAAAGGCTGGGCCAGGCACGATGGCTCAC...AAAGGCACGCAGCTCCAGCATGAATCGTTCTAACCCAACAGTGACAAGAACTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR CCA 90 bp GCCAGCGCACTGGATTTATCTTCCCGAATGACTTCTGAAACACTCAAACGCCCGAGGTGTCCGATTGGGTaGAATGAGTTCTTTCCTGTC +
Preference number: 4 (lower is better)
Translates to: ASALDLSSRMTSETLKRPRCPIG*NEFFPV
Trigger: GACAGGAAAGAACTCATTCCACCCAATCGGACACCT...CGGGCGTTTGAGTGTTTCAGAAGTCATTCGGGAAGATAAATCCAGTGCGCTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450849.7
3UTR CAA 72 bp TCCAGGTCTTCCAAGCTGTGCACGTACTGGATCTTGTaGATGAACTTGACGCTGATGAAAGGGCGAGAGATG +
Preference number: 4 (lower is better)
Translates to: SRSSKLCTYWIL*MNLTLMKGREM
Trigger: CATCTCTCGCCCTTTCATCAGCGTCAAGTTCATCAACAAGATCCAGTACGTGCACAGCTTGGAAGACCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597739.1
CDS-3UTR TCA 90 bp CATTTCTGTTCTGAAAAACCGCAAAACTCATCGTTGGAAGGATGGGCTGCTGACTTGTGCAATGGGCTCTaGTCCTCTCAAAGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: HFCSEKPQNSSLEGWAADLCNGL*SSQRSW
Trigger: CCAGCTCCTTTGAGAGGATCAGAGCCCATTGCACAA...GTCAGCAGCCCATCCTTCCAACGATGAGTTTTGCGGTTTTTCAGAACAGAAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR TCA 90 bp GGATGCTGGGTTTCAGAGATGAACGGAGGGGCTGGCACCCTTGGAAGATTGGGAATTTATCTTCCCGAATaGCTTCTGAAACACTCAAAC +
Preference number: 4 (lower is better)
Translates to: GCWVSEMNGGAGTLGRLGIYLPE*LLKHSN
Trigger: GTTTGAGTGTTTCAGAAGTCATTCGGGAAGATAAAT...TCCCAATCTTCCAAGGGTGCCAGCCCCTCCGTTCATCTCTGAAACCCAGCATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
CDS-3UTR GCA 90 bp ACCCAGCCACTTTTGTCATCTTGTGTTGGCTTTGGCAGCGACACCATTCACTGGGTCTTCCTCTTACGATaGGCTCCGTTGAAATTTAGC +
Preference number: 4 (lower is better)
Translates to: TQPLLSSCVGFGSDTIHWVFLLR*APLKFS
Trigger: GCTAAATTTCAACGGAGCGCATCGTAAGAGGAAGAC...CCAGTGAATGGTGTCGCTGCCAAAGCCAACACAAGATGACAAAAGTGGCTGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR GCA 90 bp ACAAGCAAGAGAAGGGTCTTGAATCTTGTATCCAGCTCTGACCACAGAGGCTGCAGGTCTTCCAAGCTGTaGACGTACTGGATCTTGTTG +
Preference number: 4 (lower is better)
Translates to: TSKRRVLNLVSSSDHRGCRSSKL*TYWILL
Trigger: CAACAAGATCCAGTACGTGCACAGCTTGGAAGACCT...GCAGCCTCTGTGGTCAGAGCTGGATACAAGATTCAAGACCCTTCTCTTGCTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000450849.7
ENST00000597739.1
ENST00000600960.1
CDS-3UTR GCA 90 bp ACCAGTGATCCGCATTTGGACCACATTAGAAAAGTCTGTCTTCTTTTTCCTAGGACCCCCTGCGCTTCTTaGCTTCCTCGGCTGAGAGTT +
Preference number: 4 (lower is better)
Translates to: TSDPHLDHIRKVCLLFPRTPCAS*LPRLRV
Trigger: AACTCTCAGCCGAGGAAGGCAAGAAGCGCAGGGGGT...CCTAGGAAAAAGAAGACAGACTTTTCTAATGTGGTCCAAATGCGGATCACTGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
CDS-3UTR GCA 90 bp CATTTCTGTTCTGAAAAACCGCAAAACTCATCGTTGGAAGGATGGGCTGCTGACCTCGGTCTCCCAAAGTaGTGGGATTATAGGCGTGAG +
Preference number: 4 (lower is better)
Translates to: HFCSEKPQNSSLEGWAADLGLPK*WDYRRE
Trigger: CTCACGCCTATAATCCCAGCACTTTGGGAGACCGAG...GTCAGCAGCCCATCCTTCCAACGATGAGTTTTGCGGTTTTTCAGAACAGAAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450849.7
3UTR CAA 72 bp GAAACACTCAAACGCCCGATACCCTGTATCTTCCTCTaGCTAGGTCTGCCTATTTCAGAGCCAGTTTCTGAG +
Preference number: 4 (lower is better)
Translates to: ETLKRPIPCIFL*LGLPISEPVSE
Trigger: CTCAGAAACTGGCTCTGAAATAGGCAGACCTAGCAAGAGGAAGATACAGGGTATCGGGCGTTTGAGTGTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
CDS-3UTR TCA 90 bp GATGAGTTGCTCCAGGTCTTCCAAGCTGTGCACGTACTGGATCTTGTTGATGAAGCAAGAGAAGGGTCTTaGATCTTGTATCCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: DELLQVFQAVHVLDLVDEAREGS*ILYPAL
Trigger: CAGAGCTGGATACAAGATTCAAGACCCTTCTCTTGC...TTCATCAACAAGATCCAGTACGTGCACAGCTTGGAAGACCTGGAGCAACTCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597739.1
CDS-3UTR TCA 90 bp ACCAGTGATCCGCATTTGGACCACATTAGAAAAGTCTGTCTTCTTTTTCCTAGGGGGTTGGGGGAGCAGTaGGGTCCACATATCTCATTC +
Preference number: 4 (lower is better)
Translates to: TSDPHLDHIRKVCLLFPRGLGEQ*GPHISF
Trigger: GAATGAGATATGTGGACCTCACTGCTCCCCCAACCC...CCTAGGAAAAAGAAGACAGACTTTTCTAATGTGGTCCAAATGCGGATCACTGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
CDS-3UTR TCA 90 bp CTTTGTTATGCTCACGTCGCCTCAGGACATGAACGTGACTTAGGGTTGGAACTTTTCCCGAATGACTTCTaGAACACTCAAACGCCCGAT +
Preference number: 4 (lower is better)
Translates to: LCYAHVASGHERDLGLELFPNDF*NTQTPD
Trigger: ATCGGGCGTTTGAGTGTTTCAGAAGTCATTCGGGAA...AAGTTCCAACCCTAAGTCACGTTCATGTCCTGAGGCGACGTGAGCATAACAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600960.1
CDS-3UTR GCA 90 bp GTGACAAGCAAGAGAAGGGTCTTGAATCTTGTATCCAGCTCTGACCACAGAGGCGTCTTCCTCTTACGATaGGCTCCGTTGAAATTTAGC +
Preference number: 4 (lower is better)
Translates to: VTSKRRVLNLVSSSDHRGVFLLR*APLKFS
Trigger: GCTAAATTTCAACGGAGCGCATCGTAAGAGGAAGAC...GCCTCTGTGGTCAGAGCTGGATACAAGATTCAAGACCCTTCTCTTGCTTGTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000450849.7
ENST00000597739.1
ENST00000600960.1
CDS-3UTR GCA 90 bp CAGGTAGGGCCTCACTTGTCACTTGATTGCTGCTGTAGACACTCAATTATTAGGTCTATACGGTGCTCTTaGTCCCCGATGATCACTGTC +
Preference number: 4 (lower is better)
Translates to: QVGPHLSLDCCCRHSIIRSIRCS*SPMITV
Trigger: GACAGTGATCATCGGGGAGCAAGAGCACCGTATAGA...CCTAATAATTGAGTGTCTACAGCAGCAATCAAGTGACAAGTGAGGCCCTACCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR GCA 90 bp CTTTGTTATGCTCACGTCGCCTCAGGACATGAACGTGACTTAGGGTTGGAACTTAGGTCTTCCAAGCTGTaGACGTACTGGATCTTGTTG +
Preference number: 4 (lower is better)
Translates to: LCYAHVASGHERDLGLELRSSKL*TYWILL
Trigger: CAACAAGATCCAGTACGTGCACAGCTTGGAAGACCT...AAGTTCCAACCCTAAGTCACGTTCATGTCCTGAGGCGACGTGAGCATAACAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600960.1
CDS-3UTR GCA 90 bp ACAAGCAAGAGAAGGGTCTTGAATCTTGTATCCAGCTCTGACCACAGAGGCTGCGCTCACTGTAACCTCTaGCTCTCAGGTTTAAGTGAT +
Preference number: 4 (lower is better)
Translates to: TSKRRVLNLVSSSDHRGCAHCNL*LSGLSD
Trigger: ATCACTTAAACCTGAGAGGCAGAGGTTACAGTGAGC...GCAGCCTCTGTGGTCAGAGCTGGATACAAGATTCAAGACCCTTCTCTTGCTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
CDS-3UTR GCA 90 bp CTGGGTGTCATTATGAGCGAGAAGGGGGCGGGTCAAATGAAAAACCATGGGTGTTGGAATAACCCCAAATaGAATTCCTTGCTGTCTCAG +
Preference number: 4 (lower is better)
Translates to: LGVIMSEKGAGQMKNHGCWNNPK*NSLLSQ
Trigger: CTGAGACAGCAAGGAATTGCATTTGGGGTTATTCCA...ACACCCATGGTTTTTCATTTGACCCGCCCCCTTCTCGCTCATAATGACACCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR CCA 90 bp GCCAGCGCACTGGATTTATCTTCCCGAATGACTTCTGAAACACTCAAACGCCCGAAGCTGTGCACGTACTaGATCTTGTTGATGAACTTG +
Preference number: 4 (lower is better)
Translates to: ASALDLSSRMTSETLKRPKLCTY*ILLMNL
Trigger: CAAGTTCATCAACAAGATCCAGTACGTGCACAGCTT...CGGGCGTTTGAGTGTTTCAGAAGTCATTCGGGAAGATAAATCCAGTGCGCTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
CDS-3UTR CCA 90 bp AAGCAGCTGAAAAGGATGCTGGGTTTCAGAGATGAACGGAGGGGCTGGCACCCTAATGTTCTAGATTACTaGGGTGTCATTTTGCAATCG +
Preference number: 4 (lower is better)
Translates to: KQLKRMLGFRDERRGWHPNVLDY*GVILQS
Trigger: CGATTGCAAAATGACACCCCAGTAATCTAGAACATT...AGGGTGCCAGCCCCTCCGTTCATCTCTGAAACCCAGCATCCTTTTCAGCTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
CDS-3UTR GCA 90 bp CTGATACAAATCCATCTCAAAGCCCATCTGTGGACGGTGCAGGTCGTGGCCCAGTTGTCACTTGATTGCTaGTGTAGACACTCAATTATT +
Preference number: 4 (lower is better)
Translates to: LIQIHLKAHLWTVQVVAQLSLDC*CRHSII
Trigger: AATAATTGAGTGTCTACAGCAGCAATCAAGTGACAA...CTGGGCCACGACCTGCACCGTCCACAGATGGGCTTTGAGATGGATTTGTATCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR CCA 90 bp ACAAGCAAGAGAAGGGTCTTGAATCTTGTATCCAGCTCTGACCACAGAGGCTGCCCAGTGATCCGCATTTaGACCACATTAGAAAAGTCT +
Preference number: 4 (lower is better)
Translates to: TSKRRVLNLVSSSDHRGCPVIRI*TTLEKS
Trigger: AGACTTTTCTAATGTGGTCCAAATGCGGATCACTGG...GCAGCCTCTGTGGTCAGAGCTGGATACAAGATTCAAGACCCTTCTCTTGCTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
CDS-3UTR CCA 90 bp CATTTCTGTTCTGAAAAACCGCAAAACTCATCGTTGGAAGGATGGGCTGCTGACATCTTGTGTTGGCTTTaGCAGCGACACCATTCACTG +
Preference number: 4 (lower is better)
Translates to: HFCSEKPQNSSLEGWAADILCWL*QRHHSL
Trigger: CAGTGAATGGTGTCGCTGCCAAAGCCAACACAAGAT...GTCAGCAGCCCATCCTTCCAACGATGAGTTTTGCGGTTTTTCAGAACAGAAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450849.7
3UTR CAA 72 bp TGCCATCATCGTTGGAATAACCCCAAATGCAATTCCTaGCTGTCTCAGGTCAAGATGCACTGGACGCTTTCA +
Preference number: 4 (lower is better)
Translates to: CHHRWNNPKCNS*LSQVKMHWTLS
Trigger: TGAAAGCGTCCAGTGCATCTTGACCTGAGACAGCAAGGAATTGCATTTGGGGTTATTCCAACGATGATGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450849.7
3UTR CAA 72 bp ATTGCTGCTGTAGACACTCAATTATTAGGTGTCCGATaGGGTGGAATGAGTTCTTTCCTGTCCCCGTCTCCT +
Preference number: 4 (lower is better)
Translates to: IAAVDTQLLGVR*GGMSSFLSPSP
Trigger: AGGAGACGGGGACAGGAAAGAACTCATTCCACCCAATCGGACACCTAATAATTGAGTGTCTACAGCAGCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR GCA 90 bp GCAGTTCTTGTCACTGTTGGGTTAGAACGATTCATGCTGGAGCTGCGTGCCTTTCACTTGTCACTTGATTaGTGCTGTAGACACTCAATT +
Preference number: 4 (lower is better)
Translates to: AVLVTVGLERFMLELRAFHLSLD*CCRHSI
Trigger: AATTGAGTGTCTACAGCAGCAATCAAGTGACAAGTG...AAAGGCACGCAGCTCCAGCATGAATCGTTCTAACCCAACAGTGACAAGAACTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR CCA 90 bp ACCCAGCCACTTTTGTCATCTTGTGTTGGCTTTGGCAGCGACACCATTCACTGGAATGTTCTAGATTACTaGGGTGTCATTTTGCAATCG +
Preference number: 4 (lower is better)
Translates to: TQPLLSSCVGFGSDTIHWNVLDY*GVILQS
Trigger: CGATTGCAAAATGACACCCCAGTAATCTAGAACATT...CCAGTGAATGGTGTCGCTGCCAAAGCCAACACAAGATGACAAAAGTGGCTGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR CCA 90 bp GAATGTTCTAGATTACTGGGGTGTCATTTTGCAATCGGAGGACAAGGATGGTTGGAGGTTTCACCATGTTaGCCAGGCTGTTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: ECSRLLGCHFAIGGQGWLEVSPC*PGCSQT
Trigger: AGTTTGAGAACAGCCTGGCCAACATGGTGAAACCTC...CAACCATCCTTGTCCTCCGATTGCAAAATGACACCCCAGTAATCTAGAACATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
CDS-3UTR CCA 90 bp ACCAGTGATCCGCATTTGGACCACATTAGAAAAGTCTGTCTTCTTTTTCCTAGGTCATCGTTGGAAGGATaGGCTGCTGACCAGGACTTT +
Preference number: 4 (lower is better)
Translates to: TSDPHLDHIRKVCLLFPRSSLEG*AADQDF
Trigger: AAAGTCCTGGTCAGCAGCCCATCCTTCCAACGATGA...CCTAGGAAAAAGAAGACAGACTTTTCTAATGTGGTCCAAATGCGGATCACTGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR CCA 90 bp CATTTCTGTTCTGAAAAACCGCAAAACTCATCGTTGGAAGGATGGGCTGCTGACAAGCTGTGCACGTACTaGATCTTGTTGATGAACTTG +
Preference number: 4 (lower is better)
Translates to: HFCSEKPQNSSLEGWAADKLCTY*ILLMNL
Trigger: CAAGTTCATCAACAAGATCCAGTACGTGCACAGCTT...GTCAGCAGCCCATCCTTCCAACGATGAGTTTTGCGGTTTTTCAGAACAGAAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR TCA 90 bp GAATGTTCTAGATTACTGGGGTGTCATTTTGCAATCGGAGGACAAGGATGGTTGATGTTTTCAAGCAGCTaGAAAGGATGCTGGGTTTCA +
Preference number: 4 (lower is better)
Translates to: ECSRLLGCHFAIGGQGWLMFSSS*KGCWVS
Trigger: TGAAACCCAGCATCCTTTTCAGCTGCTTGAAAACAT...CAACCATCCTTGTCCTCCGATTGCAAAATGACACCCCAGTAATCTAGAACATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
CDS-3UTR CCA 90 bp GAATGTTCTAGATTACTGGGGTGTCATTTTGCAATCGGAGGACAAGGATGGTTGCCAGTGATCCGCATTTaGACCACATTAGAAAAGTCT +
Preference number: 4 (lower is better)
Translates to: ECSRLLGCHFAIGGQGWLPVIRI*TTLEKS
Trigger: AGACTTTTCTAATGTGGTCCAAATGCGGATCACTGG...CAACCATCCTTGTCCTCCGATTGCAAAATGACACCCCAGTAATCTAGAACATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
3UTR CAA 72 bp AGTGCTTCTAGAGTCCATCTGACCAGTGATCCGCATTaGGACCACATTAGAAAAGTCTGTCTTCTTTTTCCT +
Preference number: 4 (lower is better)
Translates to: SASRVHLTSDPH*DHIRKVCLLFP
Trigger: AGGAAAAAGAAGACAGACTTTTCTAATGTGGTCCAAATGCGGATCACTGGTCAGATGGACTCTAGAAGCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
CDS-3UTR TCA 90 bp ACCAGTGATCCGCATTTGGACCACATTAGAAAAGTCTGTCTTCTTTTTCCTAGGGAAAAACCATGGGTGTaGAATTTGGACATAAGGTCG +
Preference number: 4 (lower is better)
Translates to: TSDPHLDHIRKVCLLFPREKPWV*NLDIRS
Trigger: CGACCTTATGTCCAAATTTCACACCCATGGTTTTTC...CCTAGGAAAAAGAAGACAGACTTTTCTAATGTGGTCCAAATGCGGATCACTGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
CDS-3UTR CAA 90 bp TTGGCGGCGCTGCCGTCCTCCGTCGTGCCGTCCCCAAATAGATCCGCGCTGTCCTCCCCGGGCATGTTCTaGGCGGTGGCCACGGGGGTG +
Preference number: 5 (lower is better)
Translates to: LAALPSSVVPSPNRSALSSPGMF*AVATGV
Trigger: CACCCCCGTGGCCACCGCCAAGAACATGCCCGGGGA...GGACAGCGCGGATCTATTTGGGGACGGCACGACGGAGGACGGCAGCGCCGCCAA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000597739.1
CDS-3UTR CAA 90 bp GGCTGCGAGCAGGAGCGGAGGCCACCGACGCCACGCGGGCCACCCCCTGCGCTTGCAGGGGCTGGAGGCTaGTTTCCTGATCTTCTGAGA +
Preference number: 5 (lower is better)
Translates to: GCEQERRPPTPRGPPPALAGAGG*FPDLLR
Trigger: TCTCAGAAGATCAGGAAACAAGCCTCCAGCCCCTGC...AAGCGCAGGGGGTGGCCCGCGTGGCGTCGGTGGCCTCCGCTCCTGCTCGCAGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000600960.1
CDS-3UTR CAA 90 bp GGCTGCGAGCAGGAGCGGAGGCCACCGACGCCACGCGGGCCACCCCCTGCGCTTTCTTTTGAGTCAGTCTaGCTCTGTCTCCCAGGCTGG +
Preference number: 5 (lower is better)
Translates to: GCEQERRPPTPRGPPPALSFESV*LCLPGW
Trigger: CCAGCCTGGGAGACAGAGCAAGACTGACTCAAAAGA...AAGCGCAGGGGGTGGCCCGCGTGGCGTCGGTGGCCTCCGCTCCTGCTCGCAGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR CAA 90 bp CGGAGGCCACCGACGCCACGCGGGCCACCCCCTGCGCTTCTTGCCTTCCTCGGCGTCTATACGGTGCTCTaGCTCCCCGATGATCACTGT +
Preference number: 5 (lower is better)
Translates to: RRPPTPRGPPPALLAFLGVYTVL*LPDDHC
Trigger: ACAGTGATCATCGGGGAGCAAGAGCACCGTATAGAC...GCCGAGGAAGGCAAGAAGCGCAGGGGGTGGCCCGCGTGGCGTCGGTGGCCTCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000450849.7
ENST00000597739.1
ENST00000600960.1
CDS-3UTR CAA 90 bp GCAGGAGCGGAGGCCACCGACGCCACGCGGGCCACCCCCTGCGCTTCTTGCCTTCAGGTAGGGCCTCACTaGTCACTTGATTGCTGCTGT +
Preference number: 5 (lower is better)
Translates to: AGAEATDATRATPCASCLQVGPH*SLDCCC
Trigger: ACAGCAGCAATCAAGTGACAAGTGAGGCCCTACCTG...AAGGCAAGAAGCGCAGGGGGTGGCCCGCGTGGCGTCGGTGGCCTCCGCTCCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR CAA 90 bp CGGAGGCCACCGACGCCACGCGGGCCACCCCCTGCGCTTCTTGCCTTCCTCGGCCTGTGGATTTTGGACTaGGTGGTTCCCAGGATTGTG +
Preference number: 5 (lower is better)
Translates to: RRPPTPRGPPPALLAFLGLWILD*VVPRIV
Trigger: CACAATCCTGGGAACCACCAAGTCCAAAATCCACAG...GCCGAGGAAGGCAAGAAGCGCAGGGGGTGGCCCGCGTGGCGTCGGTGGCCTCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597739.1
CDS-3UTR CAA 90 bp ACAGGCGCCCGTTGGCGGCGCTGCCGTCCTCCGTCGTGCCGTCCCCAAATAGATGGCACCCTTGGAAGATaGGGACTCAGGATGAGGCAG +
Preference number: 5 (lower is better)
Translates to: TGARWRRCRPPSCRPQIDGTLGR*GLRMRQ
Trigger: CTGCCTCATCCTGAGTCCCAATCTTCCAAGGGTGCC...ATCTATTTGGGGACGGCACGACGGAGGACGGCAGCGCCGCCAACGGGCGCCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597739.1
CDS-3UTR CAA 90 bp GGCTGCGAGCAGGAGCGGAGGCCACCGACGCCACGCGGGCCACCCCCTGCGCTTAGCAAGAGAAGGGTCTaGAATCTTGTATCCAGCTCT +
Preference number: 5 (lower is better)
Translates to: GCEQERRPPTPRGPPPALSKRRV*NLVSSS
Trigger: AGAGCTGGATACAAGATTCAAGACCCTTCTCTTGCT...AAGCGCAGGGGGTGGCCCGCGTGGCGTCGGTGGCCTCCGCTCCTGCTCGCAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000450849.7
ENST00000597739.1
ENST00000600960.1
CDS-3UTR CAA 90 bp AATAGATCCGCGCTGTCCCCGGGCATGTTCTTGGCGGTGGCCACGGGGGTGTCGCCTGCCCTGTGGATTTaGGACTTGGTGGTTCCCAGG +
Preference number: 5 (lower is better)
Translates to: NRSALSPGMFLAVATGVSPALWI*DLVVPR
Trigger: CCTGGGAACCACCAAGTCCAAAATCCACAGGGCAGG...CGACACCCCCGTGGCCACCGCCAAGAACATGCCCGGGGACAGCGCGGATCTATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597739.1
CDS-3UTR CAA 90 bp AAGCAGCTGAAAAGGATGCTGGGTTTCAGAGATGAACGGAGGGGCTGGCACCCTGGTGGCCCCGGCTGTTaGACCTCGGCATGCCTGCCG +
Preference number: 5 (lower is better)
Translates to: KQLKRMLGFRDERRGWHPGGPGC*TSACLP
Trigger: CGGCAGGCATGCCGAGGTCAAACAGCCGGGGCCACC...AGGGTGCCAGCCCCTCCGTTCATCTCTGAAACCCAGCATCCTTTTCAGCTGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS TCA 90 bp CCGGGCTGCCAAGCAGTTCCACCCCCGTCTCTTCTGGGAGTGGCCTaGCAGTTTCCAGCCTGCCCTGTGGATTTTGGACTTGGTGGTTCC +
Preference number: 5 (lower is better)
Translates to: PGCQAVPPPSLLGVA*QFPACPVDFGLGGS
Trigger: GGAACCACCAAGTCCAAAATCCACAGGGCAGGCTGGAAACTGTCAGGCCACTCCCAGAAGAGACGGGGGTGGAACTGCTTGGCAGCCCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597739.1
CDS-3UTR CAA 90 bp GATGATCACTGTCCGCCACAGGCGCCCGTTGGCGGCGCTGCCGTCCTCCGTCGTAGCAAGAGAAGGGTCTaGAATCTTGTATCCAGCTCT +
Preference number: 5 (lower is better)
Translates to: DDHCPPQAPVGGAAVLRRSKRRV*NLVSSS
Trigger: AGAGCTGGATACAAGATTCAAGACCCTTCTCTTGCT...ACGACGGAGGACGGCAGCGCCGCCAACGGGCGCCTGTGGCGGACAGTGATCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597739.1
CDS-3UTR CAA 90 bp GCCAGCGCACTGGATTTATCTTCCCGAATGACTTCTGAAACACTCAAACGCCCGCGCCGGGGGCCTCTTTaGCTCTGGAGGGTCCGCTGG +
Preference number: 5 (lower is better)
Translates to: ASALDLSSRMTSETLKRPRRGPL*LWRVRW
Trigger: CCAGCGGACCCTCCAGAGCAAAAGAGGCCCCCGGCG...CGGGCGTTTGAGTGTTTCAGAAGTCATTCGGGAAGATAAATCCAGTGCGCTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS GCA 90 bp CCTTCAGAGCCATTGATTCAGCCTCGTGCCCTAAACAGGGCTGGGTaGAGGGGAGGCGGAAGTTTCTCAGGCACACTCACTTTGCAGGGC +
Preference number: 5 (lower is better)
Translates to: PSEPLIQPRALNRAG*RGGGSFSGTLTLQG
Trigger: GCCCTGCAAAGTGAGTGTGCCTGAGAAACTTCCGCCTCCCCTGCACCCAGCCCTGTTTAGGGCACGAGGCTGAATCAATGGCTCTGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598136.5
CDS CCA 90 bp CGGGCCTTCAGAGCCATTGATTCAGCCTCGTGCCCTAAACAGGGCTaGGTGCAGGGGAGGCGGAAGTTTCTCAGGCACACTCACTTTGCA +
Preference number: 5 (lower is better)
Translates to: RAFRAIDSASCPKQG*VQGRRKFLRHTHFA
Trigger: TGCAAAGTGAGTGTGCCTGAGAAACTTCCGCCTCCCCTGCACCCAGCCCTGTTTAGGGCACGAGGCTGAATCAATGGCTCTGAAGGCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598136.5
CDS-3UTR CAA 90 bp CGGTTAAGGCCCAGCAGTTCTTGTCACTGTTGGGTTAGAACGATTCATGCTGGATCCCCGGGCATGTTCTaGGCGGTGGCCACGGGGGTG +
Preference number: 5 (lower is better)
Translates to: RLRPSSSCHCWVRTIHAGSPGMF*AVATGV
Trigger: CACCCCCGTGGCCACCGCCAAGAACATGCCCGGGGA...TCCAGCATGAATCGTTCTAACCCAACAGTGACAAGAACTGCTGGGCCTTAACCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR CAA 90 bp GGATGCTGGGTTTCAGAGATGAACGGAGGGGCTGGCACCCTTGGAAGATTGGGAGAGGGGCTGGCACCCTaGGAAGATTGGGACTCAGGA +
Preference number: 5 (lower is better)
Translates to: GCWVSEMNGGAGTLGRLGEGLAP*EDWDSG
Trigger: TCCTGAGTCCCAATCTTCCAAGGGTGCCAGCCCCTC...TCCCAATCTTCCAAGGGTGCCAGCCCCTCCGTTCATCTCTGAAACCCAGCATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000450849.7
ENST00000597739.1
ENST00000600960.1
CDS-3UTR CAA 90 bp GGTGGGGGCAGAATGTTTAGCCGGCAGGCACCTTCTGGGTCAGGTAGGGCCTCAAGTTTCGCCTGCCTGTaGTCTGTGACTGCTGGTGAT +
Preference number: 5 (lower is better)
Translates to: GGGRMFSRQAPSGSGRASSFACL*SVTAGD
Trigger: ATCACCAGCAGTCACAGACAACAGGCAGGCGAAACT...TGAGGCCCTACCTGACCCAGAAGGTGCCTGCCGGCTAAACATTCTGCCCCCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR CAA 90 bp AAGAACCCGCTGGTCCAAGCTTTGAATGCAGGTGGCTGCGGCCAGCGCACTGGAGTCTATACGGTGCTCTaGCTCCCCGATGATCACTGT +
Preference number: 5 (lower is better)
Translates to: KNPLVQALNAGGCGQRTGVYTVL*LPDDHC
Trigger: ACAGTGATCATCGGGGAGCAAGAGCACCGTATAGAC...TCCAGTGCGCTGGCCGCAGCCACCTGCATTCAAAGCTTGGACCAGCGGGTTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
CDS-3UTR CAA 90 bp CCGAACAAGAACCCGCTGGTCCAAGCTTTGAATGCAGGTGGCTGCGGCCAGCGCTTCCATAGGGATGAGTaGCTCCAGGTCTTCCAAGCT +
Preference number: 5 (lower is better)
Translates to: PNKNPLVQALNAGGCGQRFHRDE*LQVFQA
Trigger: AGCTTGGAAGACCTGGAGCAACTCATCCCTATGGAA...GCGCTGGCCGCAGCCACCTGCATTCAAAGCTTGGACCAGCGGGTTCTTGTTCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
CDS-3UTR CAA 90 bp AGGTCTATACGGTGCTCTTGCTCCCCGATGATCACTGTCCGCCACAGGCGCCCGTTCCATAGGGATGAGTaGCTCCAGGTCTTCCAAGCT +
Preference number: 5 (lower is better)
Translates to: RSIRCSCSPMITVRHRRPFHRDE*LQVFQA
Trigger: AGCTTGGAAGACCTGGAGCAACTCATCCCTATGGAA...CGGGCGCCTGTGGCGGACAGTGATCATCGGGGAGCAAGAGCACCGTATAGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597739.1
CDS-3UTR CAA 90 bp TTCGCCTGCCTGTTGTCTGTGACTGCTGGTGATCCAAAGGGGCGTGGGTGGGCCCACATATCTCATTCCTaGGTGGGAGGTATTGACGGG +
Preference number: 5 (lower is better)
Translates to: FACLLSVTAGDPKGRGWAHISHS*VGGIDG
Trigger: CCCGTCAATACCTCCCACCAAGGAATGAGATATGTG...GGCCCACCCACGCCCCTTTGGATCACCAGCAGTCACAGACAACAGGCAGGCGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR CAA 90 bp CTGATACAAATCCATCTCAAAGCCCATCTGTGGACGGTGCAGGTCGTGGCCCAGATTCGGGACAGGGTCTaGCCCCTGTGCCCGGGATTT +
Preference number: 5 (lower is better)
Translates to: LIQIHLKAHLWTVQVVAQIRDRV*PLCPGF
Trigger: AAATCCCGGGCACAGGGGCAAGACCCTGTCCCGAAT...CTGGGCCACGACCTGCACCGTCCACAGATGGGCTTTGAGATGGATTTGTATCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR CAA 90 bp AAGAACCCGCTGGTCCAAGCTTTGAATGCAGGTGGCTGCGGCCAGCGCACTGGACTTCTTCCATGTCCTTaGTTATGCTCACGTCGCCTC +
Preference number: 5 (lower is better)
Translates to: KNPLVQALNAGGCGQRTGLLPCP*LCSRRL
Trigger: GAGGCGACGTGAGCATAACAAAGGACATGGAAGAAG...TCCAGTGCGCTGGCCGCAGCCACCTGCATTCAAAGCTTGGACCAGCGGGTTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
CDS-3UTR CAA 90 bp GCTGCTGATGACGTACAGGAAGAGGTTCTCCATGATGTAGTGGTAGTCGGGGAGGAGGGGCTGGCACCCTaGGAAGATTGGGACTCAGGA +
Preference number: 5 (lower is better)
Translates to: AADDVQEEVLHDVVVVGEEGLAP*EDWDSG
Trigger: TCCTGAGTCCCAATCTTCCAAGGGTGCCAGCCCCTC...CTCCCCGACTACCACTACATCATGGAGAACCTCTTCCTGTACGTCATCAGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597739.1
CDS-3UTR CAA 90 bp GGTGGGGGCAGAATGTTTAGCCGGCAGGCACCTTCTGGGTCAGGTAGGGCCTCATACTGGGGTGTCATTTaGCAATCGGAGGACAAGGAT +
Preference number: 5 (lower is better)
Translates to: GGGRMFSRQAPSGSGRASYWGVI*QSEDKD
Trigger: ATCCTTGTCCTCCGATTGCAAAATGACACCCCAGTA...TGAGGCCCTACCTGACCCAGAAGGTGCCTGCCGGCTAAACATTCTGCCCCCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR CAA 90 bp CTGACGCTGGGTTGGGGGAGCAGTGAGGTCCACATATCTCATTCCTTGGTGGGAGGTTTGCCCGGTGGCTaGACATCTGAGTTAAAGGGG +
Preference number: 5 (lower is better)
Translates to: LTLGWGSSEVHISHSLVGGLPGG*TSELKG
Trigger: CCCCTTTAACTCAGATGTCAAGCCACCGGGCAAACC...TCCCACCAAGGAATGAGATATGTGGACCTCACTGCTCCCCCAACCCAGCGTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
CDS-3UTR CAA 90 bp GTCCGATTGGGTGGAATGAGTTCTTTCCTGTCCCCGTCTCCTGTCTGTGACTTGTCCGCTGGGGCTGAGTaGGGGTCTTCAGTTTCGCCT +
Preference number: 5 (lower is better)
Translates to: VRLGGMSSFLSPSPVCDLSAGAE*GSSVSP
Trigger: AGGCGAAACTGAAGACCCCAACTCAGCCCCAGCGGA...CAAGTCACAGACAGGAGACGGGGACAGGAAAGAACTCATTCCACCCAATCGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS TCA 90 bp ACGTGGCATCAGCTTGATCTGTGCAGGGGCTGGAGGCTTGTTTCCTaGTCTTCTGAGACCAGAGCAGACCTGTTTTCCACTGGTGCCACC +
Preference number: 5 (lower is better)
Translates to: TWHQLDLCRGWRLVS*SSETRADLFSTGAT
Trigger: GGTGGCACCAGTGGAAAACAGGTCTGCTCTGGTCTCAGAAGATCAGGAAACAAGCCTCCAGCCCCTGCACAGATCAAGCTGATGCCACGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600960.1
CDS GCA 90 bp CCCAGGATTGTGCAAAGCAATTCCTGGCTGGGAAGATCTTCGTCCTaGCATTCCTCCTTCACGTCCACGTTTTCCATCCGGAGCGTGGCT +
Preference number: 5 (lower is better)
Translates to: PRIVQSNSWLGRSSS*HSSFTSTFSIRSVA
Trigger: AGCCACGCTCCGGATGGAAAACGTGGACGTGAAGGAGGAATGGCAGGACGAAGATCTTCCCAGCCAGGAATTGCTTTGCACAATCCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597739.1
CDS CCA 90 bp CCCCGTCTCTTCTGGGAGTGGCCTGACAGTTTCCAGCCTGCCCTGTaGATTTTGGACTTGGTGGTTCCCAGGATTGTGCAAAGCAATTCC +
Preference number: 5 (lower is better)
Translates to: PRLFWEWPDSFQPAL*ILDLVVPRIVQSNS
Trigger: GGAATTGCTTTGCACAATCCTGGGAACCACCAAGTCCAAAATCCACAGGGCAGGCTGGAAACTGTCAGGCCACTCCCAGAAGAGACGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597739.1
CDS-3UTR CAA 90 bp GGTGGGGGCAGAATGTTTAGCCGGCAGGCACCTTCTGGGTCAGGTAGGGCCTCATTGAAATTTAGCGTGTaGGGAGGAGAGGATGTGTCT +
Preference number: 5 (lower is better)
Translates to: GGGRMFSRQAPSGSGRASLKFSV*GGEDVS
Trigger: AGACACATCCTCTCCTCCCAACACGCTAAATTTCAA...TGAGGCCCTACCTGACCCAGAAGGTGCCTGCCGGCTAAACATTCTGCCCCCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR CAA 90 bp AGGTCTATACGGTGCTCTTGCTCCCCGATGATCACTGTCCGCCACAGGCGCCCGTTGAAATTTAGCGTGTaGGGAGGAGAGGATGTGTCT +
Preference number: 5 (lower is better)
Translates to: RSIRCSCSPMITVRHRRPLKFSV*GGEDVS
Trigger: AGACACATCCTCTCCTCCCAACACGCTAAATTTCAA...CGGGCGCCTGTGGCGGACAGTGATCATCGGGGAGCAAGAGCACCGTATAGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597739.1
CDS-3UTR CAA 90 bp GAATGTTCTAGATTACTGGGGTGTCATTTTGCAATCGGAGGACAAGGATGGTTGTCCCCGGGCATGTTCTaGGCGGTGGCCACGGGGGTG +
Preference number: 5 (lower is better)
Translates to: ECSRLLGCHFAIGGQGWLSPGMF*AVATGV
Trigger: CACCCCCGTGGCCACCGCCAAGAACATGCCCGGGGA...CAACCATCCTTGTCCTCCGATTGCAAAATGACACCCCAGTAATCTAGAACATTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
CDS-3UTR CAA 90 bp GGATGCTGGGTTTCAGAGATGAACGGAGGGGCTGGCACCCTTGGAAGATTGGGAGTCTATACGGTGCTCTaGCTCCCCGATGATCACTGT +
Preference number: 5 (lower is better)
Translates to: GCWVSEMNGGAGTLGRLGVYTVL*LPDDHC
Trigger: ACAGTGATCATCGGGGAGCAAGAGCACCGTATAGAC...TCCCAATCTTCCAAGGGTGCCAGCCCCTCCGTTCATCTCTGAAACCCAGCATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000450849.7
ENST00000597739.1
ENST00000600960.1
CDS-3UTR CAA 90 bp CCGAACAAGAACCCGCTGGTCCAAGCTTTGAATGCAGGTGGCTGCGGCCAGCGCACGTACTGGATCTTGTaGATGAACTTGACGCTGATG +
Preference number: 5 (lower is better)
Translates to: PNKNPLVQALNAGGCGQRTYWIL*MNLTLM
Trigger: CATCAGCGTCAAGTTCATCAACAAGATCCAGTACGT...GCGCTGGCCGCAGCCACCTGCATTCAAAGCTTGGACCAGCGGGTTCTTGTTCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
CDS-3UTR CAA 90 bp TTCCACTGGTGCCACCTCTGGCTTCTCTTCAGACCTGGGCAGCACAAACTCCGGTCTTTCCTCTTCGTATaGCAGGACGCAGTCTGGGAT +
Preference number: 5 (lower is better)
Translates to: FHWCHLWLLFRPGQHKLRSFLFV*QDAVWD
Trigger: ATCCCAGACTGCGTCCTGCAATACGAAGAGGAAAGA...CCGGAGTTTGTGCTGCCCAGGTCTGAAGAGAAGCCAGAGGTGGCACCAGTGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597739.1
CDS-3UTR CAA 90 bp CTGATACAAATCCATCTCAAAGCCCATCTGTGGACGGTGCAGGTCGTGGCCCAGGGTTTGCCCGGTGGCTaGACATCTGAGTTAAAGGGG +
Preference number: 5 (lower is better)
Translates to: LIQIHLKAHLWTVQVVAQGLPGG*TSELKG
Trigger: CCCCTTTAACTCAGATGTCAAGCCACCGGGCAAACC...CTGGGCCACGACCTGCACCGTCCACAGATGGGCTTTGAGATGGATTTGTATCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR CAA 90 bp CTTTGTTATGCTCACGTCGCCTCAGGACATGAACGTGACTTAGGGTTGGAACTTCAACCCGGAACAGCGTaGGCGTGTCCCAGCCTGACG +
Preference number: 5 (lower is better)
Translates to: LCYAHVASGHERDLGLELQPGTA*ACPSLT
Trigger: CGTCAGGCTGGGACACGCCAACGCTGTTCCGGGTTG...AAGTTCCAACCCTAAGTCACGTTCATGTCCTGAGGCGACGTGAGCATAACAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600960.1
CDS-3UTR CAA 90 bp GATGAGATCTGGGGCCAGTGGGCGTCTGACAGAGGTTTTCTGGCATCTGGAATCTGCAGTGGCACGATCTaGGCTCACTGTAACCTCTGC +
Preference number: 5 (lower is better)
Translates to: DEIWGQWASDRGFLASGICSGTI*AHCNLC
Trigger: GCAGAGGTTACAGTGAGCCAAGATCGTGCCACTGCA...GATTCCAGATGCCAGAAAACCTCTGTCAGACGCCCACTGGCCCCAGATCTCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
CDS CCA 90 bp GGACAGCAGGGACCCCTCACTCTGATCCAGAGAAATGTTGATCTCTaGGGCCACCAGCGTCTTCCTCTTACGATGCGCTCCGTTGAAATT +
Preference number: 5 (lower is better)
Translates to: GQQGPLTLIQRNVDL*GHQRLPLTMRSVEI
Trigger: AATTTCAACGGAGCGCATCGTAAGAGGAAGACGCTGGTGGCCCCAGAGATCAACATTTCTCTGGATCAGAGTGAGGGGTCCCTGCTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450849.7
ENST00000597739.1
ENST00000598136.5
ENST00000600960.1
CDS-3UTR CAA 90 bp CGAGAGATGGCCAGCACAGTCCGAATGAACCACGAGGGGTGGACGATGATCAAGCGCCTCAGGACATGCTaGTTTCCTGATCTTCTGAGA +
Preference number: 5 (lower is better)
Translates to: REMASTVRMNHEGWTMIKRLRTC*FPDLLR
Trigger: TCTCAGAAGATCAGGAAACAAGCATGTCCTGAGGCG...CTTGATCATCGTCCACCCCTCGTGGTTCATTCGGACTGTGCTGGCCATCTCTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597739.1
CDS-3UTR CAA 90 bp GTGACAAGCAAGAGAAGGGTCTTGAATCTTGTATCCAGCTCTGACCACAGAGGCGAGGGGCTGGCACCCTaGGAAGATTGGGACTCAGGA +
Preference number: 5 (lower is better)
Translates to: VTSKRRVLNLVSSSDHRGEGLAP*EDWDSG
Trigger: TCCTGAGTCCCAATCTTCCAAGGGTGCCAGCCCCTC...GCCTCTGTGGTCAGAGCTGGATACAAGATTCAAGACCCTTCTCTTGCTTGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000450849.7
ENST00000597739.1
ENST00000600960.1
CDS-3UTR CAA 90 bp CTGACGCTGGGTTGGGGGAGCAGTGAGGTCCACATATCTCATTCCTTGGTGGGACACATATCTCATTCCTaGGTGGGAGGTATTGACGGG +
Preference number: 5 (lower is better)
Translates to: LTLGWGSSEVHISHSLVGHISHS*VGGIDG
Trigger: CCCGTCAATACCTCCCACCAAGGAATGAGATATGTG...TCCCACCAAGGAATGAGATATGTGGACCTCACTGCTCCCCCAACCCAGCGTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
CDS-3UTR CAA 90 bp CAGGTAGGGCCTCACTTGTCACTTGATTGCTGCTGTAGACACTCAATTATTAGGCAACCCGGAACAGCGTaGGCGTGTCCCAGCCTGACG +
Preference number: 5 (lower is better)
Translates to: QVGPHLSLDCCCRHSIIRQPGTA*ACPSLT
Trigger: CGTCAGGCTGGGACACGCCAACGCTGTTCCGGGTTG...CCTAATAATTGAGTGTCTACAGCAGCAATCAAGTGACAAGTGAGGCCCTACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS GCA 90 bp TCCAGCCTGCCCTGTGGATTTTGGACTTGGTGGTTCCCAGGATTGTaGAAAGCAATTCCTGGCTGGGAAGATCTTCGTCCTGCCATTCCT +
Preference number: 5 (lower is better)
Translates to: SSLPCGFWTWWFPGL*KAIPGWEDLRPAIP
Trigger: AGGAATGGCAGGACGAAGATCTTCCCAGCCAGGAATTGCTTTGCACAATCCTGGGAACCACCAAGTCCAAAATCCACAGGGCAGGCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597739.1
CDS-3UTR CAA 90 bp GGATGCTGGGTTTCAGAGATGAACGGAGGGGCTGGCACCCTTGGAAGATTGGGATTACGATGCGCTCCGTaGAAATTTAGCGTGTTGGGA +
Preference number: 5 (lower is better)
Translates to: GCWVSEMNGGAGTLGRLGLRCAP*KFSVLG
Trigger: TCCCAACACGCTAAATTTCAACGGAGCGCATCGTAA...TCCCAATCTTCCAAGGGTGCCAGCCCCTCCGTTCATCTCTGAAACCCAGCATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000450849.7
ENST00000597739.1
ENST00000600960.1
CDS-3UTR CAA 90 bp TTCCACTGGTGCCACCTCTGGCTTCTCTTCAGACCTGGGCAGCACAAACTCCGGACGTACTGGATCTTGTaGATGAACTTGACGCTGATG +
Preference number: 5 (lower is better)
Translates to: FHWCHLWLLFRPGQHKLRTYWIL*MNLTLM
Trigger: CATCAGCGTCAAGTTCATCAACAAGATCCAGTACGT...CCGGAGTTTGTGCTGCCCAGGTCTGAAGAGAAGCCAGAGGTGGCACCAGTGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597739.1
CDS-3UTR CAA 90 bp GATGAGATCTGGGGCCAGTGGGCGTCTGACAGAGGTTTTCTGGCATCTGGAATCTCTTTCCTCTTCGTATaGCAGGACGCAGTCTGGGAT +
Preference number: 5 (lower is better)
Translates to: DEIWGQWASDRGFLASGISFLFV*QDAVWD
Trigger: ATCCCAGACTGCGTCCTGCAATACGAAGAGGAAAGA...GATTCCAGATGCCAGAAAACCTCTGTCAGACGCCCACTGGCCCCAGATCTCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000450849.7
ENST00000597739.1
ENST00000600960.1
CDS-3UTR CAA 90 bp ACAAGCAAGAGAAGGGTCTTGAATCTTGTATCCAGCTCTGACCACAGAGGCTGCGGCACCCTTGGAAGATaGGGACTCAGGATGAGGCAG +
Preference number: 5 (lower is better)
Translates to: TSKRRVLNLVSSSDHRGCGTLGR*GLRMRQ
Trigger: CTGCCTCATCCTGAGTCCCAATCTTCCAAGGGTGCC...GCAGCCTCTGTGGTCAGAGCTGGATACAAGATTCAAGACCCTTCTCTTGCTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000450849.7
ENST00000597739.1
ENST00000600960.1
CDS-3UTR CAA 90 bp CAGGTAGGGCCTCACTTGTCACTTGATTGCTGCTGTAGACACTCAATTATTAGGCCTTGGTGGGAGGTATaGACGGGGTTTGCCCGGTGG +
Preference number: 5 (lower is better)
Translates to: QVGPHLSLDCCCRHSIIRPWWEV*TGFARW
Trigger: CCACCGGGCAAACCCCGTCAATACCTCCCACCAAGG...CCTAATAATTGAGTGTCTACAGCAGCAATCAAGTGACAAGTGAGGCCCTACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR CAA 90 bp CTTCTGGGTCAGGTAGGGCCTCACTTGTCACTTGATTGCTGCTGTAGACACTCATGCAGTGGCACGATCTaGGCTCACTGTAACCTCTGC +
Preference number: 5 (lower is better)
Translates to: LLGQVGPHLSLDCCCRHSCSGTI*AHCNLC
Trigger: GCAGAGGTTACAGTGAGCCAAGATCGTGCCACTGCA...TGAGTGTCTACAGCAGCAATCAAGTGACAAGTGAGGCCCTACCTGACCCAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR CAA 90 bp CATTTCTGTTCTGAAAAACCGCAAAACTCATCGTTGGAAGGATGGGCTGCTGACAGGAGCTGCTGGCTTTaGGGGATGGGACTCGCGCAG +
Preference number: 5 (lower is better)
Translates to: HFCSEKPQNSSLEGWAADRSCWL*GMGLAQ
Trigger: CTGCGCGAGTCCCATCCCCAAAAGCCAGCAGCTCCT...GTCAGCAGCCCATCCTTCCAACGATGAGTTTTGCGGTTTTTCAGAACAGAAATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR CAA 90 bp ACCCTGATACAAATCCATCTCAAAGCCCATCTGTGGACGGTGCAGGTCGTGGCCCCCTGTGCCCGGGATTaGACATTTGGGAAACAAATG +
Preference number: 5 (lower is better)
Translates to: TLIQIHLKAHLWTVQVVAPCARD*TFGKQM
Trigger: CATTTGTTTCCCAAATGTCAAATCCCGGGCACAGGG...GGCCACGACCTGCACCGTCCACAGATGGGCTTTGAGATGGATTTGTATCAGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR CAA 90 bp GCAGTTCTTGTCACTGTTGGGTTAGAACGATTCATGCTGGAGCTGCGTGCCTTTTCTCCTGTCTGTGACTaGGAAGCGGCCCCAGTCTTC +
Preference number: 5 (lower is better)
Translates to: AVLVTVGLERFMLELRAFSPVCD*EAAPVF
Trigger: GAAGACTGGGGCCGCTTCCAAGTCACAGACAGGAGA...AAAGGCACGCAGCTCCAGCATGAATCGTTCTAACCCAACAGTGACAAGAACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR CAA 90 bp CTTCTGGGTCAGGTAGGGCCTCACTTGTCACTTGATTGCTGCTGTAGACACTCACCGCAAAACTCATCGTaGGAAGGATGGGCTGCTGAC +
Preference number: 5 (lower is better)
Translates to: LLGQVGPHLSLDCCCRHSPQNSS*EGWAAD
Trigger: GTCAGCAGCCCATCCTTCCAACGATGAGTTTTGCGG...TGAGTGTCTACAGCAGCAATCAAGTGACAAGTGAGGCCCTACCTGACCCAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR CAA 90 bp AAGCAGCTGAAAAGGATGCTGGGTTTCAGAGATGAACGGAGGGGCTGGCACCCTTTACGATGCGCTCCGTaGAAATTTAGCGTGTTGGGA +
Preference number: 5 (lower is better)
Translates to: KQLKRMLGFRDERRGWHPLRCAP*KFSVLG
Trigger: TCCCAACACGCTAAATTTCAACGGAGCGCATCGTAA...AGGGTGCCAGCCCCTCCGTTCATCTCTGAAACCCAGCATCCTTTTCAGCTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000450849.7
ENST00000597739.1
ENST00000600960.1
CDS-3UTR CAA 90 bp AAGCAGCTGAAAAGGATGCTGGGTTTCAGAGATGAACGGAGGGGCTGGCACCCTCCCTGTATCTTCCTCTaGCTAGGTCTGCCTATTTCA +
Preference number: 5 (lower is better)
Translates to: KQLKRMLGFRDERRGWHPPCIFL*LGLPIS
Trigger: TGAAATAGGCAGACCTAGCAAGAGGAAGATACAGGG...AGGGTGCCAGCCCCTCCGTTCATCTCTGAAACCCAGCATCCTTTTCAGCTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
CDS-3UTR CAA 90 bp ACCCTGATACAAATCCATCTCAAAGCCCATCTGTGGACGGTGCAGGTCGTGGCCCGTACCCAGCCACTTTaGTCATCTTGTGTTGGCTTT +
Preference number: 5 (lower is better)
Translates to: TLIQIHLKAHLWTVQVVARTQPL*SSCVGF
Trigger: AAAGCCAACACAAGATGACAAAAGTGGCTGGGTACG...GGCCACGACCTGCACCGTCCACAGATGGGCTTTGAGATGGATTTGTATCAGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR CAA 90 bp CTTTGTTATGCTCACGTCGCCTCAGGACATGAACGTGACTTAGGGTTGGAACTTGAACGTGACTTAGGGTaGGAACTTGGGCCACGTGGC +
Preference number: 5 (lower is better)
Translates to: LCYAHVASGHERDLGLELERDLG*ELGPRG
Trigger: GCCACGTGGCCCAAGTTCCAACCCTAAGTCACGTTC...AAGTTCCAACCCTAAGTCACGTTCATGTCCTGAGGCGACGTGAGCATAACAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600960.1
CDS-3UTR CAA 90 bp TGGGGGAGCAGTGAGGTCCACATATCTCATTCCTTGGTGGGAGGTATTGACGGGATCTTGTTGATGAACTaGACGCTGATGAAAGGGCGA +
Preference number: 5 (lower is better)
Translates to: WGSSEVHISHSLVGGIDGILLMN*TLMKGR
Trigger: TCGCCCTTTCATCAGCGTCAAGTTCATCAACAAGAT...CCCGTCAATACCTCCCACCAAGGAATGAGATATGTGGACCTCACTGCTCCCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
CDS-3UTR CAA 90 bp GCCAGCGCACTGGATTTATCTTCCCGAATGACTTCTGAAACACTCAAACGCCCGTCTTTCCTCTTCGTATaGCAGGACGCAGTCTGGGAT +
Preference number: 5 (lower is better)
Translates to: ASALDLSSRMTSETLKRPSFLFV*QDAVWD
Trigger: ATCCCAGACTGCGTCCTGCAATACGAAGAGGAAAGA...CGGGCGTTTGAGTGTTTCAGAAGTCATTCGGGAAGATAAATCCAGTGCGCTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
CDS-3UTR CAA 90 bp ACCCAGCCACTTTTGTCATCTTGTGTTGGCTTTGGCAGCGACACCATTCACTGGCGCCTCAGGACATGCTaGTTTCCTGATCTTCTGAGA +
Preference number: 5 (lower is better)
Translates to: TQPLLSSCVGFGSDTIHWRLRTC*FPDLLR
Trigger: TCTCAGAAGATCAGGAAACAAGCATGTCCTGAGGCG...CCAGTGAATGGTGTCGCTGCCAAAGCCAACACAAGATGACAAAAGTGGCTGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR CAA 90 bp ACCCAGCCACTTTTGTCATCTTGTGTTGGCTTTGGCAGCGACACCATTCACTGGCTTCTTCCATGTCCTTaGTTATGCTCACGTCGCCTC +
Preference number: 5 (lower is better)
Translates to: TQPLLSSCVGFGSDTIHWLLPCP*LCSRRL
Trigger: GAGGCGACGTGAGCATAACAAAGGACATGGAAGAAG...CCAGTGAATGGTGTCGCTGCCAAAGCCAACACAAGATGACAAAAGTGGCTGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR CAA 90 bp ACCAGTGATCCGCATTTGGACCACATTAGAAAAGTCTGTCTTCTTTTTCCTAGGCCTTGGTGGGAGGTATaGACGGGGTTTGCCCGGTGG +
Preference number: 5 (lower is better)
Translates to: TSDPHLDHIRKVCLLFPRPWWEV*TGFARW
Trigger: CCACCGGGCAAACCCCGTCAATACCTCCCACCAAGG...CCTAGGAAAAAGAAGACAGACTTTTCTAATGTGGTCCAAATGCGGATCACTGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
CDS-3UTR CAA 90 bp TGGGGGAGCAGTGAGGTCCACATATCTCATTCCTTGGTGGGAGGTATTGACGGGACCAGTGATCCGCATTaGGACCACATTAGAAAAGTC +
Preference number: 5 (lower is better)
Translates to: WGSSEVHISHSLVGGIDGTSDPH*DHIRKV
Trigger: GACTTTTCTAATGTGGTCCAAATGCGGATCACTGGT...CCCGTCAATACCTCCCACCAAGGAATGAGATATGTGGACCTCACTGCTCCCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
CDS-3UTR CAA 90 bp GCTGCTGATGACGTACAGGAAGAGGTTCTCCATGATGTAGTGGTAGTCGGGGAGATCTTGTTGATGAACTaGACGCTGATGAAAGGGCGA +
Preference number: 5 (lower is better)
Translates to: AADDVQEEVLHDVVVVGEILLMN*TLMKGR
Trigger: TCGCCCTTTCATCAGCGTCAAGTTCATCAACAAGAT...CTCCCCGACTACCACTACATCATGGAGAACCTCTTCCTGTACGTCATCAGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597739.1
CDS-3UTR CAA 90 bp ACCCAGCCACTTTTGTCATCTTGTGTTGGCTTTGGCAGCGACACCATTCACTGGCCCTGTATCTTCCTCTaGCTAGGTCTGCCTATTTCA +
Preference number: 5 (lower is better)
Translates to: TQPLLSSCVGFGSDTIHWPCIFL*LGLPIS
Trigger: TGAAATAGGCAGACCTAGCAAGAGGAAGATACAGGG...CCAGTGAATGGTGTCGCTGCCAAAGCCAACACAAGATGACAAAAGTGGCTGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR CAA 90 bp ACAAGCAAGAGAAGGGTCTTGAATCTTGTATCCAGCTCTGACCACAGAGGCTGCCATCTTGTGTTGGCTTaGGCAGCGACACCATTCACT +
Preference number: 5 (lower is better)
Translates to: TSKRRVLNLVSSSDHRGCHLVLA*AATPFT
Trigger: AGTGAATGGTGTCGCTGCCAAAGCCAACACAAGATG...GCAGCCTCTGTGGTCAGAGCTGGATACAAGATTCAAGACCCTTCTCTTGCTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR CAA 90 bp GCCAGCGCACTGGATTTATCTTCCCGAATGACTTCTGAAACACTCAAACGCCCGTTGAAATTTAGCGTGTaGGGAGGAGAGGATGTGTCT +
Preference number: 5 (lower is better)
Translates to: ASALDLSSRMTSETLKRPLKFSV*GGEDVS
Trigger: AGACACATCCTCTCCTCCCAACACGCTAAATTTCAA...CGGGCGTTTGAGTGTTTCAGAAGTCATTCGGGAAGATAAATCCAGTGCGCTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
CDS-3UTR CAA 90 bp GCCAGCGCACTGGATTTATCTTCCCGAATGACTTCTGAAACACTCAAACGCCCGACGTACTGGATCTTGTaGATGAACTTGACGCTGATG +
Preference number: 5 (lower is better)
Translates to: ASALDLSSRMTSETLKRPTYWIL*MNLTLM
Trigger: CATCAGCGTCAAGTTCATCAACAAGATCCAGTACGT...CGGGCGTTTGAGTGTTTCAGAAGTCATTCGGGAAGATAAATCCAGTGCGCTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
CDS-3UTR CAA 90 bp GCCAGCGCACTGGATTTATCTTCCCGAATGACTTCTGAAACACTCAAACGCCCGACCAGTGATCCGCATTaGGACCACATTAGAAAAGTC +
Preference number: 5 (lower is better)
Translates to: ASALDLSSRMTSETLKRPTSDPH*DHIRKV
Trigger: GACTTTTCTAATGTGGTCCAAATGCGGATCACTGGT...CGGGCGTTTGAGTGTTTCAGAAGTCATTCGGGAAGATAAATCCAGTGCGCTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
CDS-3UTR CAA 90 bp CGGTTAAGGCCCAGCAGTTCTTGTCACTGTTGGGTTAGAACGATTCATGCTGGACCCAAATGCAATTCCTaGCTGTCTCAGGTCAAGATG +
Preference number: 5 (lower is better)
Translates to: RLRPSSSCHCWVRTIHAGPKCNS*LSQVKM
Trigger: CATCTTGACCTGAGACAGCAAGGAATTGCATTTGGG...TCCAGCATGAATCGTTCTAACCCAACAGTGACAAGAACTGCTGGGCCTTAACCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR CAA 90 bp CGGTTAAGGCCCAGCAGTTCTTGTCACTGTTGGGTTAGAACGATTCATGCTGGAAGCAAGAGAAGGGTCTaGAATCTTGTATCCAGCTCT +
Preference number: 5 (lower is better)
Translates to: RLRPSSSCHCWVRTIHAGSKRRV*NLVSSS
Trigger: AGAGCTGGATACAAGATTCAAGACCCTTCTCTTGCT...TCCAGCATGAATCGTTCTAACCCAACAGTGACAAGAACTGCTGGGCCTTAACCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR CAA 90 bp CTTCTGGGTCAGGTAGGGCCTCACTTGTCACTTGATTGCTGCTGTAGACACTCATTATTAGGTGTCCGATaGGGTGGAATGAGTTCTTTC +
Preference number: 5 (lower is better)
Translates to: LLGQVGPHLSLDCCCRHSLLGVR*GGMSSF
Trigger: GAAAGAACTCATTCCACCCAATCGGACACCTAATAA...TGAGTGTCTACAGCAGCAATCAAGTGACAAGTGAGGCCCTACCTGACCCAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450849.7
CDS-3UTR CAA 90 bp GTCTCGATGTCATCCACGTTAATATCCAGGTCATCAGGGGTATCCAAGAAGTCATGCACGTACTGGATCTaGTTGATGAACTTGACGCTG +
Preference number: 5 (lower is better)
Translates to: VSMSSTLISRSSGVSKKSCTYWI*LMNLTL
Trigger: CAGCGTCAAGTTCATCAACAAGATCCAGTACGTGCA...TGACTTCTTGGATACCCCTGATGACCTGGATATTAACGTGGATGACATCGAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597739.1
CDS-3UTR CAA 90 bp GAATGTTCTAGATTACTGGGGTGTCATTTTGCAATCGGAGGACAAGGATGGTTGTGCACGTACTGGATCTaGTTGATGAACTTGACGCTG +
Preference number: 5 (lower is better)
Translates to: ECSRLLGCHFAIGGQGWLCTYWI*LMNLTL
Trigger: CAGCGTCAAGTTCATCAACAAGATCCAGTACGTGCA...CAACCATCCTTGTCCTCCGATTGCAAAATGACACCCCAGTAATCTAGAACATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
CDS-3UTR CAA 90 bp ACCAGTGATCCGCATTTGGACCACATTAGAAAAGTCTGTCTTCTTTTTCCTAGGTTCCATAGGGATGAGTaGCTCCAGGTCTTCCAAGCT +
Preference number: 5 (lower is better)
Translates to: TSDPHLDHIRKVCLLFPRFHRDE*LQVFQA
Trigger: AGCTTGGAAGACCTGGAGCAACTCATCCCTATGGAA...CCTAGGAAAAAGAAGACAGACTTTTCTAATGTGGTCCAAATGCGGATCACTGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
CDS-3UTR CAA 90 bp GAATGTTCTAGATTACTGGGGTGTCATTTTGCAATCGGAGGACAAGGATGGTTGATCTTGTTGATGAACTaGACGCTGATGAAAGGGCGA +
Preference number: 5 (lower is better)
Translates to: ECSRLLGCHFAIGGQGWLILLMN*TLMKGR
Trigger: TCGCCCTTTCATCAGCGTCAAGTTCATCAACAAGAT...CAACCATCCTTGTCCTCCGATTGCAAAATGACACCCCAGTAATCTAGAACATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
CDS-3UTR CAA 90 bp ACCAGTGATCCGCATTTGGACCACATTAGAAAAGTCTGTCTTCTTTTTCCTAGGTGCACGTACTGGATCTaGTTGATGAACTTGACGCTG +
Preference number: 5 (lower is better)
Translates to: TSDPHLDHIRKVCLLFPRCTYWI*LMNLTL
Trigger: CAGCGTCAAGTTCATCAACAAGATCCAGTACGTGCA...CCTAGGAAAAAGAAGACAGACTTTTCTAATGTGGTCCAAATGCGGATCACTGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
CDS-3UTR CAA 90 bp ACCAGTGATCCGCATTTGGACCACATTAGAAAAGTCTGTCTTCTTTTTCCTAGGTACTGGGGTGTCATTTaGCAATCGGAGGACAAGGAT +
Preference number: 5 (lower is better)
Translates to: TSDPHLDHIRKVCLLFPRYWGVI*QSEDKD
Trigger: ATCCTTGTCCTCCGATTGCAAAATGACACCCCAGTA...CCTAGGAAAAAGAAGACAGACTTTTCTAATGTGGTCCAAATGCGGATCACTGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000450849.7
ENST00000600960.1
CDS GCA 72 bp GCGTGTTGGGAGGAGAGGATGTGTCTTCCACCGGGCTaGCAAGCAGTTCCACCCCCGTCTCTTCTGGGAGTG +
Preference number: 6 (lower is better)
Translates to: ACWEERMCLPPG*QAVPPPSLLGV
Trigger: CACTCCCAGAAGAGACGGGGGTGGAACTGCTTGGCAGCCCGGTGGAAGACACATCCTCTCCTCCCAACACGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000450849.7
ENST00000597739.1
ENST00000598136.5
ENST00000600960.1
CDS CCA 72 bp CCGCAAGCTCCAGGAGAACCGCAGACTCTCCAGACTTaGAGATCCCCTCCGTGGCCCTGGGAAGATCTTCGT +
Preference number: 6 (lower is better)
Translates to: PQAPGEPQTLQT*RSPPWPWEDLR
Trigger: ACGAAGATCTTCCCAGGGCCACGGAGGGGATCTCCAAGTCTGGAGAGTCTGCGGTTCTCCTGGAGCTTGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595916.5
CDS CAA 72 bp TCCGCAAGCTCCAGGAGAACCGCAGACTCTCCAGACTaGGAGATCCCCTCCGTGGCCCTGGGAAGATCTTCG +
Preference number: 6 (lower is better)
Translates to: SASSRRTADSPD*EIPSVALGRSS
Trigger: CGAAGATCTTCCCAGGGCCACGGAGGGGATCTCCAAGTCTGGAGAGTCTGCGGTTCTCCTGGAGCTTGCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595916.5
CDS GCA 72 bp GAGATCCCCTCCGTGGCCCTGGGAAGATCTTCGTCCTaGCATTCCTCCTTCACGTCCACGTTTTCCATCCGG +
Preference number: 6 (lower is better)
Translates to: EIPSVALGRSSS*HSSFTSTFSIR
Trigger: CCGGATGGAAAACGTGGACGTGAAGGAGGAATGGCAGGACGAAGATCTTCCCAGGGCCACGGAGGGGATCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595916.5
CDS GCA 72 bp CCATTGATTCAGCCTCGTGCCCTAAACAGGGCTGGGTaGAGGGGAGGCGGAAGTTTCTCAGGCACACTCACT +
Preference number: 6 (lower is better)
Translates to: PLIQPRALNRAG*RGGGSFSGTLT
Trigger: AGTGAGTGTGCCTGAGAAACTTCCGCCTCCCCTGCACCCAGCCCTGTTTAGGGCACGAGGCTGAATCAATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598136.5
CDS CCA 72 bp AGAGCCATTGATTCAGCCTCGTGCCCTAAACAGGGCTaGGTGCAGGGGAGGCGGAAGTTTCTCAGGCACACT +
Preference number: 6 (lower is better)
Translates to: RAIDSASCPKQG*VQGRRKFLRHT
Trigger: AGTGTGCCTGAGAAACTTCCGCCTCCCCTGCACCCAGCCCTGTTTAGGGCACGAGGCTGAATCAATGGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598136.5
CDS TCA 72 bp CAAGCAGTTCCACCCCCGTCTCTTCTGGGAGTGGCCTaGCAGTTTCCAGCCTGCCCTGTGGATTTTGGACTT +
Preference number: 6 (lower is better)
Translates to: QAVPPPSLLGVA*QFPACPVDFGL
Trigger: AAGTCCAAAATCCACAGGGCAGGCTGGAAACTGTCAGGCCACTCCCAGAAGAGACGGGGGTGGAACTGCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597739.1
CDS GCA 72 bp GTCTCTTCTGGGAGTGGCCTGGGAAGATCTTCGTCCTaGCATTCCTCCTTCACGTCCACGTTTTCCATCCGG +
Preference number: 6 (lower is better)
Translates to: VSSGSGLGRSSS*HSSFTSTFSIR
Trigger: CCGGATGGAAAACGTGGACGTGAAGGAGGAATGGCAGGACGAAGATCTTCCCAGGCCACTCCCAGAAGAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000450849.7
ENST00000598136.5
ENST00000600960.1
CDS CAA 90 bp CTTGGGCCACGTGGCATCAGCTTGATCTGTGCAGGGGCTGGAGGCTaGTTTCCTGATCTTCTGAGACCAGAGCAGACCTGTTTTCCACTG +
Preference number: 6 (lower is better)
Translates to: LGPRGISLICAGAGG*FPDLLRPEQTCFPL
Trigger: CAGTGGAAAACAGGTCTGCTCTGGTCTCAGAAGATCAGGAAACAAGCCTCCAGCCCCTGCACAGATCAAGCTGATGCCACGTGGCCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600960.1
CDS CAA 72 bp GACTTAGGGTTGGAACTTGGGCCACGTGGCATCAGCTaGATCTGTGCAGGGGCTGGAGGCTTGTTTCCTGAT +
Preference number: 6 (lower is better)
Translates to: DLGLELGPRGIS*ICAGAGGLFPD
Trigger: ATCAGGAAACAAGCCTCCAGCCCCTGCACAGATCAAGCTGATGCCACGTGGCCCAAGTTCCAACCCTAAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600960.1
CDS CAA 72 bp GCTCACGTCGCCTCAGGACATGAACGTGACTTAGGGTaGGAACTTGGGCCACGTGGCATCAGCTTGATCTGT +
Preference number: 6 (lower is better)
Translates to: AHVASGHERDLG*ELGPRGISLIC
Trigger: ACAGATCAAGCTGATGCCACGTGGCCCAAGTTCCAACCCTAAGTCACGTTCATGTCCTGAGGCGACGTGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600960.1
CDS CAA 90 bp CTTTGTTATGCTCACGTCGCCTCAGGACATGAACGTGACTTAGGGTaGGAACTTGGGCCACGTGGCATCAGCTTGATCTGTGCAGGGGCT +
Preference number: 6 (lower is better)
Translates to: LCYAHVASGHERDLG*ELGPRGISLICAGA
Trigger: AGCCCCTGCACAGATCAAGCTGATGCCACGTGGCCCAAGTTCCAACCCTAAGTCACGTTCATGTCCTGAGGCGACGTGAGCATAACAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600960.1
CDS GCA 72 bp GTGCAAAGCAATTCCTGGCTGGGAAGATCTTCGTCCTaGCATTCCTCCTTCACGTCCACGTTTTCCATCCGG +
Preference number: 6 (lower is better)
Translates to: VQSNSWLGRSSS*HSSFTSTFSIR
Trigger: CCGGATGGAAAACGTGGACGTGAAGGAGGAATGGCAGGACGAAGATCTTCCCAGCCAGGAATTGCTTTGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597739.1
CDS CCA 72 bp TTCTGGGAGTGGCCTGACAGTTTCCAGCCTGCCCTGTaGATTTTGGACTTGGTGGTTCCCAGGATTGTGCAA +
Preference number: 6 (lower is better)
Translates to: FWEWPDSFQPAL*ILDLVVPRIVQ
Trigger: TTGCACAATCCTGGGAACCACCAAGTCCAAAATCCACAGGGCAGGCTGGAAACTGTCAGGCCACTCCCAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597739.1
CDS TCA 72 bp CAGCTTGATCTGTGCAGGGGCTGGAGGCTTGTTTCCTaGTCTTCTGAGACCAGAGCAGACCTGTTTTCCACT +
Preference number: 6 (lower is better)
Translates to: QLDLCRGWRLVS*SSETRADLFST
Trigger: AGTGGAAAACAGGTCTGCTCTGGTCTCAGAAGATCAGGAAACAAGCCTCCAGCCCCTGCACAGATCAAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600960.1
CDS CCA 72 bp GACTTGGTGGTTCCCAGGATTGTGCAAAGCAATTCCTaGCTGGGAAGATCTTCGTCCTGCCATTCCTCCTTC +
Preference number: 6 (lower is better)
Translates to: DLVVPRIVQSNS*LGRSSSCHSSF
Trigger: GAAGGAGGAATGGCAGGACGAAGATCTTCCCAGCCAGGAATTGCTTTGCACAATCCTGGGAACCACCAAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597739.1
CDS CCA 72 bp ACAGTTTCCAGCCTGCCCTGTGGATTTTGGACTTGGTaGTTCCCAGGATTGTGCAAAGCAATTCCTGGCTGG +
Preference number: 6 (lower is better)
Translates to: TVSSLPCGFWTW*FPGLCKAIPGW
Trigger: CCAGCCAGGAATTGCTTTGCACAATCCTGGGAACCACCAAGTCCAAAATCCACAGGGCAGGCTGGAAACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597739.1
CDS CCA 72 bp CTGACAGTTTCCAGCCTGCCCTGTGGATTTTGGACTTaGTGGTTCCCAGGATTGTGCAAAGCAATTCCTGGC +
Preference number: 6 (lower is better)
Translates to: LTVSSLPCGFWT*WFPGLCKAIPG
Trigger: GCCAGGAATTGCTTTGCACAATCCTGGGAACCACCAAGTCCAAAATCCACAGGGCAGGCTGGAAACTGTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597739.1
CDS CAA 72 bp GAGTGGCCTGACAGTTTCCAGCCTGCCCTGTGGATTTaGGACTTGGTGGTTCCCAGGATTGTGCAAAGCAAT +
Preference number: 6 (lower is better)
Translates to: EWPDSFQPALWI*DLVVPRIVQSN
Trigger: ATTGCTTTGCACAATCCTGGGAACCACCAAGTCCAAAATCCACAGGGCAGGCTGGAAACTGTCAGGCCACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597739.1
CDS CAA 90 bp GTTTCCAGCCTGCCCTGTGGATTTTGGACTTGGTGGTTCCCAGGATaGTGCAAAGCAATTCCTGGCTGGGAAGATCTTCGTCCTGCCATT +
Preference number: 6 (lower is better)
Translates to: VSSLPCGFWTWWFPG*CKAIPGWEDLRPAI
Trigger: AATGGCAGGACGAAGATCTTCCCAGCCAGGAATTGCTTTGCACAATCCTGGGAACCACCAAGTCCAAAATCCACAGGGCAGGCTGGAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597739.1
CDS GCA 72 bp CCCTGTGGATTTTGGACTTGGTGGTTCCCAGGATTGTaGAAAGCAATTCCTGGCTGGGAAGATCTTCGTCCT +
Preference number: 6 (lower is better)
Translates to: PCGFWTWWFPGL*KAIPGWEDLRP
Trigger: AGGACGAAGATCTTCCCAGCCAGGAATTGCTTTGCACAATCCTGGGAACCACCAAGTCCAAAATCCACAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597739.1
CDS CCA 72 bp AGTGGCCTGACAGTTTCCAGCCTGCCCTGTGGATTTTaGACTTGGTGGTTCCCAGGATTGTGCAAAGCAATT +
Preference number: 6 (lower is better)
Translates to: SGLTVSSLPCGF*TWWFPGLCKAI
Trigger: AATTGCTTTGCACAATCCTGGGAACCACCAAGTCCAAAATCCACAGGGCAGGCTGGAAACTGTCAGGCCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597739.1