Pregenerated sensors for ATAD3C (Homo sapiens)
Ensembl gene IDs: ENSG00000215915Ensembl transcript IDs: ENST00000378785.7, ENST00000475091.2
Found 68 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGTGTGAGCAACAAGGCTGTTTATTTCACCTGGGTGCAGGCGGGCTaGGTTCAAAAAGAGAGTCAGCAAAGGGTGGTGGGATTATCACTA | + |
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Preference number: 1 (lower is better) Translates to: CVSNKAVYFTWVQAG*VQKESQQRVVGLSL Trigger: TAGTGATAATCCCACCACCCTTTGCTGACTCTCTTTTTGAACTCAGCCCGCCTGCACCCAGGTGAAATAAACAGCCTTGTTGCTCACACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000378785.7 |
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| 3UTR-3UTR TCA 90 bp | CAGCCTCCAAGCCAAGAAGCTGGGACCACCGGCATGTGCCACCTGGCCCTTTTTCCTGCCTCAGCCTCCTaGGTACCTGGGATTTCAGGC | + |
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Preference number: 2 (lower is better) Translates to: QPPSQEAGTTGMCHLALFPASAS*VPGISG Trigger: GCCTGAAATCCCAGGTACTCAGGAGGCTGAGGCAGG...AAAAAGGGCCAGGTGGCACATGCCGGTGGTCCCAGCTTCTTGGCTTGGAGGCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000378785.7 |
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| 3UTR-3UTR GCA 90 bp | CTACCTCAGCCTCCAAGCCAAGAAGCTGGGACCACCGGCATGTGCCACCTGGCCGGGATTTCAGGCACTTaGCACCACGGCCGGCTAATT | + |
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Preference number: 2 (lower is better) Translates to: LPQPPSQEAGTTGMCHLAGISGT*HHGRLI Trigger: AATTAGCCGGCCGTGGTGGCAAGTGCCTGAAATCCC...GGCCAGGTGGCACATGCCGGTGGTCCCAGCTTCTTGGCTTGGAGGCTGAGGTAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378785.7 |
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| 3UTR-3UTR TCA 90 bp | CTTGTTGCCCATGCTGCAGTGCAATTCCATGGTCTCAGCTCAGTGCAACCTCCAACTCCCGACCTCAGGTaGTCCACTCTCCTTGGCCTC | + |
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Preference number: 2 (lower is better) Translates to: LVAHAAVQFHGLSSVQPPTPDLR*STLLGL Trigger: GAGGCCAAGGAGAGTGGATCACCTGAGGTCGGGAGT...TGGAGGTTGCACTGAGCTGAGACCATGGAATTGCACTGCAGCATGGGCAACAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378785.7 |
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| 3UTR-3UTR CCA 90 bp | ACATTCTCAAGGGTGGGGAGAATGACAAAGAACCTTCTTAAGGGTGGGGGAGATTCCAAGCCAAGAAGCTaGGACCACCGGCATGTGCCA | + |
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Preference number: 2 (lower is better) Translates to: TFSRVGRMTKNLLKGGGDSKPRS*DHRHVP Trigger: TGGCACATGCCGGTGGTCCCAGCTTCTTGGCTTGGA...ATCTCCCCCACCCTTAAGAAGGTTCTTTGTCATTCTCCCCACCCTTGAGAATGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000378785.7 |
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| 3UTR-3UTR CCA 90 bp | ACATTCTCAAGGGTGGGGAGAATGACAAAGAACCTTCTTAAGGGTGGGGGAGATTATGATGGCTTAGCTTaGGCCCAGAGGCCTGACACC | + |
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Preference number: 2 (lower is better) Translates to: TFSRVGRMTKNLLKGGGDYDGLA*AQRPDT Trigger: GGTGTCAGGCCTCTGGGCCCAAGCTAAGCCATCATA...ATCTCCCCCACCCTTAAGAAGGTTCTTTGTCATTCTCCCCACCCTTGAGAATGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000378785.7 |
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| 3UTR-3UTR GCA 90 bp | GTTAAGGCTCTTTTCACTTATTTTGTGGATCTTCAGTTGCTTCAGGCCATCTGGATGGTCTCAGCTCAGTaGAACCTCCACTTCCCGGGC | + |
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Preference number: 2 (lower is better) Translates to: VKALFTYFVDLQLLQAIWMVSAQ*NLHFPG Trigger: GCCCGGGAAGTGGAGGTTGCACTGAGCTGAGACCAT...CCAGATGGCCTGAAGCAACTGAAGATCCACAAAATAAGTGAAAAGAGCCTTAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378785.7 |
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| 3UTR-3UTR GCA 90 bp | ACATTCTCAAGGGTGGGGAGAATGACAAAGAACCTTCTTAAGGGTGGGGGAGATTTGCCCATGCTGCAGTaGAATTCCATGGTCTCAGCT | + |
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Preference number: 2 (lower is better) Translates to: TFSRVGRMTKNLLKGGGDLPMLQ*NSMVSA Trigger: AGCTGAGACCATGGAATTGCACTGCAGCATGGGCAA...ATCTCCCCCACCCTTAAGAAGGTTCTTTGTCATTCTCCCCACCCTTGAGAATGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000378785.7 |
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| 3UTR-3UTR CCA 90 bp | ACATTCTCAAGGGTGGGGAGAATGACAAAGAACCTTCTTAAGGGTGGGGGAGATATTGATCAGCTAGGGTaGGGCAGAAACAAATCACAA | + |
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Preference number: 2 (lower is better) Translates to: TFSRVGRMTKNLLKGGGDIDQLG*GRNKSQ Trigger: TTGTGATTTGTTTCTGCCCCACCCTAGCTGATCAAT...ATCTCCCCCACCCTTAAGAAGGTTCTTTGTCATTCTCCCCACCCTTGAGAATGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000378785.7 |
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| 3UTR-3UTR GCA 90 bp | AAGGCTCTTTTCACTTATTTTGTGGATCTTCAGTTGCTTCAGGCCATCTGGATGTCTTGTTGCCCATGCTaGAGTGCAATTCCATGGTCT | + |
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Preference number: 2 (lower is better) Translates to: KALFTYFVDLQLLQAIWMSCCPC*SAIPWS Trigger: AGACCATGGAATTGCACTGCAGCATGGGCAACAAGA...CATCCAGATGGCCTGAAGCAACTGAAGATCCACAAAATAAGTGAAAAGAGCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378785.7 |
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| 3UTR-3UTR GCA 90 bp | GTTAAGGCTCTTTTCACTTATTTTGTGGATCTTCAGTTGCTTCAGGCCATCTGGGAGTTTGACTCTTGTTaGCCATGCTGCAGTGCAATT | + |
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Preference number: 2 (lower is better) Translates to: VKALFTYFVDLQLLQAIWEFDSC*PCCSAI Trigger: AATTGCACTGCAGCATGGGCAACAAGAGTCAAACTC...CCAGATGGCCTGAAGCAACTGAAGATCCACAAAATAAGTGAAAAGAGCCTTAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378785.7 |
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| 3UTR-3UTR CAA 90 bp | CTTGTTGCCCATGCTGCAGTGCAATTCCATGGTCTCAGCTCAGTGCAACCTCCAGGTGATCCACTCTCCTaGGCCTCGCTGAGATTCCAG | + |
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Preference number: 3 (lower is better) Translates to: LVAHAAVQFHGLSSVQPPGDPLS*ASLRFQ Trigger: CTGGAATCTCAGCGAGGCCAAGGAGAGTGGATCACC...TGGAGGTTGCACTGAGCTGAGACCATGGAATTGCACTGCAGCATGGGCAACAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378785.7 |
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| 3UTR TCA 72 bp | AACAAGGCTGTTTATTTCACCTGGGTGCAGGCGGGCTaGGTTCAAAAAGAGAGTCAGCAAAGGGTGGTGGGA | + |
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Preference number: 3 (lower is better) Translates to: NKAVYFTWVQAG*VQKESQQRVVG Trigger: TCCCACCACCCTTTGCTGACTCTCTTTTTGAACTCAGCCCGCCTGCACCCAGGTGAAATAAACAGCCTTGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000378785.7 |
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| 3UTR TCA 72 bp | GGATCTCACAAAGTACATTCTCAAGGGTGGGGAGAATaGCAAAGAACCTTCTTAAGGGTGGGGGAGATTGCA | + |
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Preference number: 3 (lower is better) Translates to: GSHKVHSQGWGE*QRTFLRVGEIA Trigger: TGCAATCTCCCCCACCCTTAAGAAGGTTCTTTGTCATTCTCCCCACCCTTGAGAATGTACTTTGTGAGATCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000378785.7 |
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| 3UTR TCA 72 bp | AACCTTCTTAAGGGTGGGGGAGATTGCAAAGTACATTaGTCAGCTAGGGTGGGGCAGAAACAAATCACAATG | + |
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Preference number: 3 (lower is better) Translates to: NLLKGGGDCKVH*SARVGQKQITM Trigger: CATTGTGATTTGTTTCTGCCCCACCCTAGCTGATCAATGTACTTTGCAATCTCCCCCACCCTTAAGAAGGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000378785.7 |
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| 3UTR GCA 72 bp | TTAAGGCTCTTTTCACTTATTTTGTGGATCTTCAGTTaGTTCAGGCCATCTGGATGTATAAGTGCAGGTCAC | + |
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Preference number: 3 (lower is better) Translates to: LRLFSLILWIFS*FRPSGCISAGH Trigger: GTGACCTGCACTTATACATCCAGATGGCCTGAAGCAACTGAAGATCCACAAAATAAGTGAAAAGAGCCTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378785.7 |
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| 3UTR CCA 72 bp | GAATGTCATCAGTTAAGGCTCTTTTCACTTATTTTGTaGATCTTCAGTTGCTTCAGGCCATCTGGATGTATA | + |
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Preference number: 3 (lower is better) Translates to: ECHQLRLFSLIL*IFSCFRPSGCI Trigger: TATACATCCAGATGGCCTGAAGCAACTGAAGATCCACAAAATAAGTGAAAAGAGCCTTAACTGATGACATTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378785.7 |
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| CDS-3UTR TCA 90 bp | CAGCCTCCAAGCCAAGAAGCTGGGACCACCGGCATGTGCCACCTGGCCCTTTTTGATCTCCTGACCTCGTaGTCCGCCCACCTCAGCCTC | + |
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Preference number: 4 (lower is better) Translates to: QPPSQEAGTTGMCHLALFDLLTS*SAHLSL Trigger: GAGGCTGAGGTGGGCGGATCACGAGGTCAGGAGATC...AAAAAGGGCCAGGTGGCACATGCCGGTGGTCCCAGCTTCTTGGCTTGGAGGCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000378785.7 |
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| CDS-3UTR GCA 90 bp | CCTACCTCAGCCTCCAAGCCAAGAAGCTGGGACCACCGGCATGTGCCACCTGGCTGGCCCAGGCTGGAGTaGAGTGGCATGATCTCTGCT | + |
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Preference number: 4 (lower is better) Translates to: PTSASKPRSWDHRHVPPGWPRLE*SGMISA Trigger: AGCAGAGATCATGCCACTGCACTCCAGCCTGGGCCA...GCCAGGTGGCACATGCCGGTGGTCCCAGCTTCTTGGCTTGGAGGCTGAGGTAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378785.7 |
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| CDS-3UTR TCA 90 bp | CAGCCTCCAAGCCAAGAAGCTGGGACCACCGGCATGTGCCACCTGGCCCTTTTTAGGTGCCAGCCGCCCTaGTGGACTCCAAGAAGGTCT | + |
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Preference number: 4 (lower is better) Translates to: QPPSQEAGTTGMCHLALFRCQPP*WTPRRS Trigger: AGACCTTCTTGGAGTCCATCAGGGCGGCTGGCACCT...AAAAAGGGCCAGGTGGCACATGCCGGTGGTCCCAGCTTCTTGGCTTGGAGGCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000378785.7 |
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| CDS-3UTR CCA 90 bp | CTACCTCAGCCTCCAAGCCAAGAAGCTGGGACCACCGGCATGTGCCACCTGGCCACCATAAAAATCTTCTaGCCGGGCGCGGTGGCCCAT | + |
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Preference number: 4 (lower is better) Translates to: LPQPPSQEAGTTGMCHLATIKIF*PGAVAH Trigger: ATGGGCCACCGCGCCCGGCCAGAAGATTTTTATGGT...GGCCAGGTGGCACATGCCGGTGGTCCCAGCTTCTTGGCTTGGAGGCTGAGGTAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000378785.7 |
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| CDS-3UTR CCA 90 bp | CAGCCTCCAAGCCAAGAAGCTGGGACCACCGGCATGTGCCACCTGGCCCTTTTTTCAGCCCAGCCACCGTaGCTGTCACTTTGTCCCGGT | + |
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Preference number: 4 (lower is better) Translates to: QPPSQEAGTTGMCHLALFSAQPP*LSLCPG Trigger: ACCGGGACAAAGTGACAGCCACGGTGGCTGGGCTGA...AAAAAGGGCCAGGTGGCACATGCCGGTGGTCCCAGCTTCTTGGCTTGGAGGCTG 61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENST00000378785.7 |
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| CDS-3UTR TCA 90 bp | CTACCTCAGCCTCCAAGCCAAGAAGCTGGGACCACCGGCATGTGCCACCTGGCCTGGAGTGCAGTGGCATaGTCTCTGCTTACTGCAAGC | + |
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Preference number: 4 (lower is better) Translates to: LPQPPSQEAGTTGMCHLAWSAVA*SLLTAS Trigger: GCTTGCAGTAAGCAGAGATCATGCCACTGCACTCCA...GGCCAGGTGGCACATGCCGGTGGTCCCAGCTTCTTGGCTTGGAGGCTGAGGTAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378785.7 |
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| CDS-3UTR TCA 90 bp | CTACCTCAGCCTCCAAGCCAAGAAGCTGGGACCACCGGCATGTGCCACCTGGCCAGGTCACAGGAGATATaGTGGCTTAGCTTGGGCCCA | + |
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Preference number: 4 (lower is better) Translates to: LPQPPSQEAGTTGMCHLARSQEI*WLSLGP Trigger: TGGGCCCAAGCTAAGCCATCATATCTCCTGTGACCT...GGCCAGGTGGCACATGCCGGTGGTCCCAGCTTCTTGGCTTGGAGGCTGAGGTAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378785.7 |
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| CDS-3UTR CCA 90 bp | GGCAGGGGATGGATCTCACAAAGTACATTCTCAAGGGTGGGGAGAATGACAAAGCGCCGGCTGACCTGCTaGATGGGGTGCCGCAGCGCC | + |
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Preference number: 4 (lower is better) Translates to: GRGWISQSTFSRVGRMTKRRLTC*MGCRSA Trigger: GGCGCTGCGGCACCCCATCCAGCAGGTCAGCCGGCG...CTTTGTCATTCTCCCCACCCTTGAGAATGTACTTTGTGAGATCCATCCCCTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000378785.7 |
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| CDS-3UTR TCA 90 bp | CTACCTCAGCCTCCAAGCCAAGAAGCTGGGACCACCGGCATGTGCCACCTGGCCGATTGCAAAGTACATTaGTCAGCTAGGGTGGGGCAG | + |
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Preference number: 4 (lower is better) Translates to: LPQPPSQEAGTTGMCHLADCKVH*SARVGQ Trigger: CTGCCCCACCCTAGCTGATCAATGTACTTTGCAATC...GGCCAGGTGGCACATGCCGGTGGTCCCAGCTTCTTGGCTTGGAGGCTGAGGTAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378785.7 |
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| CDS-3UTR TCA 90 bp | CAGCCTCCAAGCCAAGAAGCTGGGACCACCGGCATGTGCCACCTGGCCCTTTTTTGGGTGCAGGCGGGCTaGGTTCAAAAAGAGAGTCAG | + |
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Preference number: 4 (lower is better) Translates to: QPPSQEAGTTGMCHLALFWVQAG*VQKESQ Trigger: CTGACTCTCTTTTTGAACTCAGCCCGCCTGCACCCA...AAAAAGGGCCAGGTGGCACATGCCGGTGGTCCCAGCTTCTTGGCTTGGAGGCTG 59% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENST00000378785.7 |
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| CDS-3UTR TCA 90 bp | CAGCCTCCAAGCCAAGAAGCTGGGACCACCGGCATGTGCCACCTGGCCCTTTTTTGGCCAGGATCAGCATaGATTTGTTGCTGTGCTGGC | + |
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Preference number: 4 (lower is better) Translates to: QPPSQEAGTTGMCHLALFWPGSA*ICCCAG Trigger: GCCAGCACAGCAACAAATTCATGCTGATCCTGGCCA...AAAAAGGGCCAGGTGGCACATGCCGGTGGTCCCAGCTTCTTGGCTTGGAGGCTG 58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENST00000378785.7 |
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| CDS-3UTR GCA 90 bp | CCTACCTCAGCCTCCAAGCCAAGAAGCTGGGACCACCGGCATGTGCCACCTGGCCAGTGGCATGATCTCTaGTTACTGCAAGCTCTACCT | + |
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Preference number: 4 (lower is better) Translates to: PTSASKPRSWDHRHVPPGQWHDL*LLQALP Trigger: AGGTAGAGCTTGCAGTAAGCAGAGATCATGCCACTG...GCCAGGTGGCACATGCCGGTGGTCCCAGCTTCTTGGCTTGGAGGCTGAGGTAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378785.7 |
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| CDS-3UTR GCA 90 bp | CTACCTCAGCCTCCAAGCCAAGAAGCTGGGACCACCGGCATGTGCCACCTGGCCTCTTGTTGCCCATGCTaGAGTGCAATTCCATGGTCT | + |
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Preference number: 4 (lower is better) Translates to: LPQPPSQEAGTTGMCHLASCCPC*SAIPWS Trigger: AGACCATGGAATTGCACTGCAGCATGGGCAACAAGA...GGCCAGGTGGCACATGCCGGTGGTCCCAGCTTCTTGGCTTGGAGGCTGAGGTAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378785.7 |
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| CDS-3UTR TCA 90 bp | CCTACCTCAGCCTCCAAGCCAAGAAGCTGGGACCACCGGCATGTGCCACCTGGCAATGGCTGTTGTCAGTaGTCTGCTATCAAGAACGTG | + |
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Preference number: 4 (lower is better) Translates to: PTSASKPRSWDHRHVPPGNGCCQ*SAIKNV Trigger: CACGTTCTTGATAGCAGATCACTGACAACAGCCATT...GCCAGGTGGCACATGCCGGTGGTCCCAGCTTCTTGGCTTGGAGGCTGAGGTAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378785.7 |
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| CDS-3UTR TCA 90 bp | CTTGTTGCCCATGCTGCAGTGCAATTCCATGGTCTCAGCTCAGTGCAACCTCCATGCGATCTTCCGGCATaGCATGCCCTCTGTCAGCCG | + |
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Preference number: 4 (lower is better) Translates to: LVAHAAVQFHGLSSVQPPCDLPA*HALCQP Trigger: CGGCTGACAGAGGGCATGTCATGCCGGAAGATCGCA...TGGAGGTTGCACTGAGCTGAGACCATGGAATTGCACTGCAGCATGGGCAACAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378785.7 |
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| CDS-3UTR GCA 90 bp | ACATTCTCAAGGGTGGGGAGAATGACAAAGAACCTTCTTAAGGGTGGGGGAGATGCATACGCCGTGGCCTaGCAGGACACGGCCAGCTGT | + |
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Preference number: 4 (lower is better) Translates to: TFSRVGRMTKNLLKGGGDAYAVA*QDTASC Trigger: ACAGCTGGCCGTGTCCTGGCAGGCCACGGCGTATGC...ATCTCCCCCACCCTTAAGAAGGTTCTTTGTCATTCTCCCCACCCTTGAGAATGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000378785.7 |
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| CDS-3UTR GCA 90 bp | CTTGTTGCCCATGCTGCAGTGCAATTCCATGGTCTCAGCTCAGTGCAACCTCCAATGGTCTCAGCTCAGTaGAACCTCCACTTCCCGGGC | + |
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Preference number: 4 (lower is better) Translates to: LVAHAAVQFHGLSSVQPPMVSAQ*NLHFPG Trigger: GCCCGGGAAGTGGAGGTTGCACTGAGCTGAGACCAT...TGGAGGTTGCACTGAGCTGAGACCATGGAATTGCACTGCAGCATGGGCAACAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378785.7 |
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| CDS-3UTR CCA 90 bp | CTTGTTGCCCATGCTGCAGTGCAATTCCATGGTCTCAGCTCAGTGCAACCTCCAGGGCGTCCTTTGACATaGCCTGCAGATGCAGGGACA | + |
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Preference number: 4 (lower is better) Translates to: LVAHAAVQFHGLSSVQPPGRPLT*PADAGT Trigger: TGTCCCTGCATCTGCAGGCCATGTCAAAGGACGCCC...TGGAGGTTGCACTGAGCTGAGACCATGGAATTGCACTGCAGCATGGGCAACAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378785.7 |
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| CDS-3UTR TCA 90 bp | ACATTCTCAAGGGTGGGGAGAATGACAAAGAACCTTCTTAAGGGTGGGGGAGATTTGGGCCCAGAGGCCTaGCACCCTGAAGGTGGAGGT | + |
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Preference number: 4 (lower is better) Translates to: TFSRVGRMTKNLLKGGGDLGPEA*HPEGGG Trigger: ACCTCCACCTTCAGGGTGTCAGGCCTCTGGGCCCAA...ATCTCCCCCACCCTTAAGAAGGTTCTTTGTCATTCTCCCCACCCTTGAGAATGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000378785.7 |
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| CDS-3UTR CCA 90 bp | CTTGTTGCCCATGCTGCAGTGCAATTCCATGGTCTCAGCTCAGTGCAACCTCCATATGATGGCTTAGCTTaGGCCCAGAGGCCTGACACC | + |
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Preference number: 4 (lower is better) Translates to: LVAHAAVQFHGLSSVQPPYDGLA*AQRPDT Trigger: GGTGTCAGGCCTCTGGGCCCAAGCTAAGCCATCATA...TGGAGGTTGCACTGAGCTGAGACCATGGAATTGCACTGCAGCATGGGCAACAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378785.7 |
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| CDS-3UTR TCA 90 bp | ACATTCTCAAGGGTGGGGAGAATGACAAAGAACCTTCTTAAGGGTGGGGGAGATCCTGCCTCAGCCTCCTaGGTACCTGGGATTTCAGGC | + |
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Preference number: 4 (lower is better) Translates to: TFSRVGRMTKNLLKGGGDPASAS*VPGISG Trigger: GCCTGAAATCCCAGGTACTCAGGAGGCTGAGGCAGG...ATCTCCCCCACCCTTAAGAAGGTTCTTTGTCATTCTCCCCACCCTTGAGAATGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000378785.7 |
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| CDS-3UTR CCA 90 bp | CTTGTTGCCCATGCTGCAGTGCAATTCCATGGTCTCAGCTCAGTGCAACCTCCACAGGCTGGAGTGCAGTaGCATGATCTCTGCTTACTG | + |
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Preference number: 4 (lower is better) Translates to: LVAHAAVQFHGLSSVQPPQAGVQ*HDLCLL Trigger: CAGTAAGCAGAGATCATGCCACTGCACTCCAGCCTG...TGGAGGTTGCACTGAGCTGAGACCATGGAATTGCACTGCAGCATGGGCAACAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378785.7 |
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| CDS-3UTR CCA 90 bp | GGCAGGGGATGGATCTCACAAAGTACATTCTCAAGGGTGGGGAGAATGACAAAGTCCAAGCCAAGAAGCTaGGACCACCGGCATGTGCCA | + |
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Preference number: 4 (lower is better) Translates to: GRGWISQSTFSRVGRMTKSKPRS*DHRHVP Trigger: TGGCACATGCCGGTGGTCCCAGCTTCTTGGCTTGGA...CTTTGTCATTCTCCCCACCCTTGAGAATGTACTTTGTGAGATCCATCCCCTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378785.7 |
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| CDS-3UTR TCA 90 bp | ACATTCTCAAGGGTGGGGAGAATGACAAAGAACCTTCTTAAGGGTGGGGGAGATCCAACAAGCTCAGGGTaGCGAGGACAAGCATCTGAC | + |
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Preference number: 4 (lower is better) Translates to: TFSRVGRMTKNLLKGGGDPTSSG*RGQASD Trigger: GTCAGATGCTTGTCCTCGTCACCCTGAGCTTGTTGG...ATCTCCCCCACCCTTAAGAAGGTTCTTTGTCATTCTCCCCACCCTTGAGAATGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000378785.7 |
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| CDS-3UTR GCA 90 bp | ACATTCTCAAGGGTGGGGAGAATGACAAAGAACCTTCTTAAGGGTGGGGGAGATCCTGAAGGTGGAGGTTaGAGTGAGCCGAGATCACAC | + |
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Preference number: 4 (lower is better) Translates to: TFSRVGRMTKNLLKGGGDPEGGG*SEPRSH Trigger: GTGTGATCTCGGCTCACTGCAACCTCCACCTTCAGG...ATCTCCCCCACCCTTAAGAAGGTTCTTTGTCATTCTCCCCACCCTTGAGAATGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000378785.7 |
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| CDS-3UTR CCA 90 bp | GTTAAGGCTCTTTTCACTTATTTTGTGGATCTTCAGTTGCTTCAGGCCATCTGGAGCCTCCCGAGTAGCTaGGACTACAGGCGACCGCCA | + |
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Preference number: 4 (lower is better) Translates to: VKALFTYFVDLQLLQAIWSLPSS*DYRRPP Trigger: TGGCGGTCGCCTGTAGTCCCAGCTACTCGGGAGGCT...CCAGATGGCCTGAAGCAACTGAAGATCCACAAAATAAGTGAAAAGAGCCTTAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378785.7 |
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| CDS-3UTR TCA 90 bp | ACATTCTCAAGGGTGGGGAGAATGACAAAGAACCTTCTTAAGGGTGGGGGAGATTATTCTCTGAGCTGCTaGGGACTCAGCATCAGGTCT | + |
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Preference number: 4 (lower is better) Translates to: TFSRVGRMTKNLLKGGGDYSLSC*GLSIRS Trigger: AGACCTGATGCTGAGTCCTCAGCAGCTCAGAGAATA...ATCTCCCCCACCCTTAAGAAGGTTCTTTGTCATTCTCCCCACCCTTGAGAATGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000378785.7 |
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| CDS-3UTR GCA 90 bp | GGCAGGGGATGGATCTCACAAAGTACATTCTCAAGGGTGGGGAGAATGACAAAGATGATCTCTGCTTACTaGAAGCTCTACCTCTCGGGT | + |
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Preference number: 4 (lower is better) Translates to: GRGWISQSTFSRVGRMTKMISAY*KLYLSG Trigger: ACCCGAGAGGTAGAGCTTGCAGTAAGCAGAGATCAT...CTTTGTCATTCTCCCCACCCTTGAGAATGTACTTTGTGAGATCCATCCCCTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378785.7 |
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| CDS-3UTR TCA 90 bp | AAGGCTCTTTTCACTTATTTTGTGGATCTTCAGTTGCTTCAGGCCATCTGGATGGGCGCGGTGGCCCATTaGGAAAATATGCAGGACCTT | + |
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Preference number: 4 (lower is better) Translates to: KALFTYFVDLQLLQAIWMGAVAH*ENMQDL Trigger: AAGGTCCTGCATATTTTCTCAATGGGCCACCGCGCC...CATCCAGATGGCCTGAAGCAACTGAAGATCCACAAAATAAGTGAAAAGAGCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000378785.7 |
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| CDS-3UTR TCA 90 bp | AAGGCTCTTTTCACTTATTTTGTGGATCTTCAGTTGCTTCAGGCCATCTGGATGGACTCCAAGAAGGTCTaGTGGTGCTTCTGCACGGAC | + |
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Preference number: 4 (lower is better) Translates to: KALFTYFVDLQLLQAIWMDSKKV*WCFCTD Trigger: GTCCGTGCAGAAGCACCATCAGACCTTCTTGGAGTC...CATCCAGATGGCCTGAAGCAACTGAAGATCCACAAAATAAGTGAAAAGAGCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378785.7 |
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| CDS-3UTR GCA 90 bp | AAGGCTCTTTTCACTTATTTTGTGGATCTTCAGTTGCTTCAGGCCATCTGGATGTCCTTTGACATGGCCTaGAGATGCAGGGACACGGAG | + |
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Preference number: 4 (lower is better) Translates to: KALFTYFVDLQLLQAIWMSFDMA*RCRDTE Trigger: CTCCGTGTCCCTGCATCTGCAGGCCATGTCAAAGGA...CATCCAGATGGCCTGAAGCAACTGAAGATCCACAAAATAAGTGAAAAGAGCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378785.7 |
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| CDS-3UTR GCA 90 bp | GTTAAGGCTCTTTTCACTTATTTTGTGGATCTTCAGTTGCTTCAGGCCATCTGGGGGATTTCAGGCACTTaGCACCACGGCCGGCTAATT | + |
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Preference number: 4 (lower is better) Translates to: VKALFTYFVDLQLLQAIWGISGT*HHGRLI Trigger: AATTAGCCGGCCGTGGTGGCAAGTGCCTGAAATCCC...CCAGATGGCCTGAAGCAACTGAAGATCCACAAAATAAGTGAAAAGAGCCTTAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000378785.7 |
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| CDS-3UTR GCA 90 bp | GGCAGGGGATGGATCTCACAAAGTACATTCTCAAGGGTGGGGAGAATGACAAAGGAGTTTGACTCTTGTTaGCCATGCTGCAGTGCAATT | + |
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Preference number: 4 (lower is better) Translates to: GRGWISQSTFSRVGRMTKEFDSC*PCCSAI Trigger: AATTGCACTGCAGCATGGGCAACAAGAGTCAAACTC...CTTTGTCATTCTCCCCACCCTTGAGAATGTACTTTGTGAGATCCATCCCCTGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378785.7 |
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| CDS-3UTR GCA 90 bp | AAGGCTCTTTTCACTTATTTTGTGGATCTTCAGTTGCTTCAGGCCATCTGGATGTCATCCAGGCTGGAGTaGAATGGTGCGATCTTGGCT | + |
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Preference number: 4 (lower is better) Translates to: KALFTYFVDLQLLQAIWMSSRLE*NGAILA Trigger: AGCCAAGATCGCACCATTGCACTCCAGCCTGGATGA...CATCCAGATGGCCTGAAGCAACTGAAGATCCACAAAATAAGTGAAAAGAGCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378785.7 |
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| CDS-3UTR TCA 90 bp | AAGGCTCTTTTCACTTATTTTGTGGATCTTCAGTTGCTTCAGGCCATCTGGATGGAAGTACGTATTCTCTaGGCTGCTGAGGACTCAGCA | + |
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Preference number: 4 (lower is better) Translates to: KALFTYFVDLQLLQAIWMEVRIL*AAEDSA Trigger: TGCTGAGTCCTCAGCAGCTCAGAGAATACGTACTTC...CATCCAGATGGCCTGAAGCAACTGAAGATCCACAAAATAAGTGAAAAGAGCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378785.7 |
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| CDS-3UTR GCA 90 bp | GTTAAGGCTCTTTTCACTTATTTTGTGGATCTTCAGTTGCTTCAGGCCATCTGGCTGTTGTCAGTGATCTaGTATCAAGAACGTGCGGGC | + |
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Preference number: 4 (lower is better) Translates to: VKALFTYFVDLQLLQAIWLLSVI*YQERAG Trigger: GCCCGCACGTTCTTGATAGCAGATCACTGACAACAG...CCAGATGGCCTGAAGCAACTGAAGATCCACAAAATAAGTGAAAAGAGCCTTAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378785.7 |
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| CDS-3UTR GCA 90 bp | GTTAAGGCTCTTTTCACTTATTTTGTGGATCTTCAGTTGCTTCAGGCCATCTGGTTGCCCATGCTGCAGTaGAATTCCATGGTCTCAGCT | + |
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Preference number: 4 (lower is better) Translates to: VKALFTYFVDLQLLQAIWLPMLQ*NSMVSA Trigger: AGCTGAGACCATGGAATTGCACTGCAGCATGGGCAA...CCAGATGGCCTGAAGCAACTGAAGATCCACAAAATAAGTGAAAAGAGCCTTAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378785.7 |
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| CDS-3UTR CCA 90 bp | GTTAAGGCTCTTTTCACTTATTTTGTGGATCTTCAGTTGCTTCAGGCCATCTGGTTTGCGGGCAGGGGATaGATCTCACAAAGTACATTC | + |
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Preference number: 4 (lower is better) Translates to: VKALFTYFVDLQLLQAIWFAGRG*ISQSTF Trigger: GAATGTACTTTGTGAGATCCATCCCCTGCCCGCAAA...CCAGATGGCCTGAAGCAACTGAAGATCCACAAAATAAGTGAAAAGAGCCTTAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000378785.7 |
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| CDS-3UTR CCA 90 bp | AAGGCTCTTTTCACTTATTTTGTGGATCTTCAGTTGCTTCAGGCCATCTGGATGTTCCTAAGCTTCCAATaGCTGTTGTCAGTGATCTGC | + |
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Preference number: 4 (lower is better) Translates to: KALFTYFVDLQLLQAIWMFLSFQ*LLSVIC Trigger: GCAGATCACTGACAACAGCCATTGGAAGCTTAGGAA...CATCCAGATGGCCTGAAGCAACTGAAGATCCACAAAATAAGTGAAAAGAGCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378785.7 |
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| CDS-3UTR CCA 90 bp | GTTAAGGCTCTTTTCACTTATTTTGTGGATCTTCAGTTGCTTCAGGCCATCTGGATTGATCAGCTAGGGTaGGGCAGAAACAAATCACAA | + |
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Preference number: 4 (lower is better) Translates to: VKALFTYFVDLQLLQAIWIDQLG*GRNKSQ Trigger: TTGTGATTTGTTTCTGCCCCACCCTAGCTGATCAAT...CCAGATGGCCTGAAGCAACTGAAGATCCACAAAATAAGTGAAAAGAGCCTTAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378785.7 |
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| 3UTR CAA 72 bp | GTGGAATGTCATCAGTTAAGGCTCTTTTCACTTATTTaGTGGATCTTCAGTTGCTTCAGGCCATCTGGATGT | + |
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Preference number: 4 (lower is better) Translates to: VECHQLRLFSLI*WIFSCFRPSGC Trigger: ACATCCAGATGGCCTGAAGCAACTGAAGATCCACAAAATAAGTGAAAAGAGCCTTAACTGATGACATTCCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378785.7 |
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| CDS-3UTR CAA 90 bp | CAGCCTCCAAGCCAAGAAGCTGGGACCACCGGCATGTGCCACCTGGCCCTTTTTGGTGATCCACTCTCCTaGGCCTCGCTGAGATTCCAG | + |
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Preference number: 5 (lower is better) Translates to: QPPSQEAGTTGMCHLALFGDPLS*ASLRFQ Trigger: CTGGAATCTCAGCGAGGCCAAGGAGAGTGGATCACC...AAAAAGGGCCAGGTGGCACATGCCGGTGGTCCCAGCTTCTTGGCTTGGAGGCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000378785.7 |
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| CDS-3UTR CAA 90 bp | CAGCCTCCAAGCCAAGAAGCTGGGACCACCGGCATGTGCCACCTGGCCCTTTTTAGCTTCCAATGGCTGTaGTCAGTGATCTGCTATCAA | + |
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Preference number: 5 (lower is better) Translates to: QPPSQEAGTTGMCHLALFSFQWL*SVICYQ Trigger: TTGATAGCAGATCACTGACAACAGCCATTGGAAGCT...AAAAAGGGCCAGGTGGCACATGCCGGTGGTCCCAGCTTCTTGGCTTGGAGGCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000378785.7 |
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| CDS-3UTR CAA 90 bp | ACATTCTCAAGGGTGGGGAGAATGACAAAGAACCTTCTTAAGGGTGGGGGAGATATCAGCATGAATTTGTaGCTGTGCTGGCCCGTGCGG | + |
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Preference number: 5 (lower is better) Translates to: TFSRVGRMTKNLLKGGGDISMNL*LCWPVR Trigger: CCGCACGGGCCAGCACAGCAACAAATTCATGCTGAT...ATCTCCCCCACCCTTAAGAAGGTTCTTTGTCATTCTCCCCACCCTTGAGAATGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000378785.7 |
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| CDS-3UTR CAA 90 bp | GGCAGGGGATGGATCTCACAAAGTACATTCTCAAGGGTGGGGAGAATGACAAAGTCATTGACAAGTTGTTaGAGCTTGGACTGTTGCTCC | + |
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Preference number: 5 (lower is better) Translates to: GRGWISQSTFSRVGRMTKSLTSC*SLDCCS Trigger: GGAGCAACAGTCCAAGCTCAAACAACTTGTCAATGA...CTTTGTCATTCTCCCCACCCTTGAGAATGTACTTTGTGAGATCCATCCCCTGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378785.7 |
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| CDS-3UTR CAA 90 bp | GTTAAGGCTCTTTTCACTTATTTTGTGGATCTTCAGTTGCTTCAGGCCATCTGGAGGATCAGCATGAATTaGTTGCTGTGCTGGCCCGTG | + |
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Preference number: 5 (lower is better) Translates to: VKALFTYFVDLQLLQAIWRISMN*LLCWPV Trigger: CACGGGCCAGCACAGCAACAAATTCATGCTGATCCT...CCAGATGGCCTGAAGCAACTGAAGATCCACAAAATAAGTGAAAAGAGCCTTAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378785.7 |
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| CDS-3UTR CAA 90 bp | ACATTCTCAAGGGTGGGGAGAATGACAAAGAACCTTCTTAAGGGTGGGGGAGATTTCCGTAAATCCTCATaGACAAGTTGTTTGAGCTTG | + |
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Preference number: 5 (lower is better) Translates to: TFSRVGRMTKNLLKGGGDFRKSS*TSCLSL Trigger: CAAGCTCAAACAACTTGTCAATGAGGATTTACGGAA...ATCTCCCCCACCCTTAAGAAGGTTCTTTGTCATTCTCCCCACCCTTGAGAATGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000378785.7 |
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| CDS CCA 72 bp | GCGTCCTTTGACATGGCCCTTTTCCTAAGCTTCCAATaGCTGTTGTCAGTGATCTGCTATCAAGAACGTGCG | + |
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Preference number: 6 (lower is better) Translates to: ASFDMALFLSFQ*LLSVICYQERA Trigger: CGCACGTTCTTGATAGCAGATCACTGACAACAGCCATTGGAAGCTTAGGAAAAGGGCCATGTCAAAGGACGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000475091.2 |
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| CDS CAA 72 bp | TTTGACATGGCCCTTTTCCTAAGCTTCCAATGGCTGTaGTCAGTGATCTGCTATCAAGAACGTGCGGGCAAG | + |
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Preference number: 6 (lower is better) Translates to: FDMALFLSFQWL*SVICYQERAGK Trigger: CTTGCCCGCACGTTCTTGATAGCAGATCACTGACAACAGCCATTGGAAGCTTAGGAAAAGGGCCATGTCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000475091.2 |
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| CDS CAA 90 bp | AGGGCGTCCTTTGACATGGCCCTTTTCCTAAGCTTCCAATGGCTGTaGTCAGTGATCTGCTATCAAGAACGTGCGGGCAAGAAAATGAAA | + |
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Preference number: 6 (lower is better) Translates to: RASFDMALFLSFQWL*SVICYQERAGKKMK Trigger: TTTCATTTTCTTGCCCGCACGTTCTTGATAGCAGATCACTGACAACAGCCATTGGAAGCTTAGGAAAAGGGCCATGTCAAAGGACGCCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000475091.2 |
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| CDS GCA 72 bp | CTTTTCCTAAGCTTCCAATGGCTGTTGTCAGTGATCTaGTATCAAGAACGTGCGGGCAAGAAAATGAAAGAA | + |
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Preference number: 6 (lower is better) Translates to: LFLSFQWLLSVI*YQERAGKKMKE Trigger: TTCTTTCATTTTCTTGCCCGCACGTTCTTGATAGCAGATCACTGACAACAGCCATTGGAAGCTTAGGAAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000378785.7 ENST00000475091.2 |
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