Pregenerated sensors for ATAD3B (Homo sapiens)
Ensembl gene IDs: ENSG00000160072Ensembl transcript IDs: ENST00000472194.6, ENST00000474481.1, ENST00000485748.5, ENST00000673477.1
Found 40 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 72 bp | CTTGGTGGCTCATCCTGTAGAGGCGGGAGGATCTCCTaGGGCCAAGAGTTGGAGACCAGCCTGGGCATTATA | + |
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Preference number: 3 (lower is better) Translates to: LGGSSCRGGRIS*GQELETSLGII Trigger: TATAATGCCCAGGCTGGTCTCCAACTCTTGGCCTCAGGAGATCCTCCCGCCTCTACAGGATGAGCCACCAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000673477.1 |
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| CDS-3UTR GCA 90 bp | GCTAGGGCGCCCCTGAAACCCCGAGCAGTGTCAGTCAATAGAGAGACACGGCGGCGAAGAGCCACGACATaGTCGCACCGCCGCCGCCGC | + |
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Preference number: 4 (lower is better) Translates to: ARAPLKPRAVSVNRETRRRRATT*SHRRRR Trigger: GCGGCGGCGGCGGTGCGAGCATGTCGTGGCTCTTCG...CCGCCGTGTCTCTCTATTGACTGACACTGCTCGGGGTTTCAGGGGCGCCCTAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000673477.1 |
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| CDS-3UTR GCA 90 bp | GCTAGGGCGCCCCTGAAACCCCGAGCAGTGTCAGTCAATAGAGAGACACGGCGGGGCCTCAGACACCCCTaGCGGGTTCCGTGGCCCCTG | + |
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Preference number: 4 (lower is better) Translates to: ARAPLKPRAVSVNRETRRGLRHP*RVPWPL Trigger: CAGGGGCCACGGAACCCGGCAGGGGTGTCTGAGGCC...CCGCCGTGTCTCTCTATTGACTGACACTGCTCGGGGTTTCAGGGGCGCCCTAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 1 transcripts: ENST00000673477.1 |
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| CDS-3UTR CCA 90 bp | GCTAGGGCGCCCCTGAAACCCCGAGCAGTGTCAGTCAATAGAGAGACACGGCGGCCCTGCCGGGTTCCGTaGCCCCTGGCCATGGCTGGA | + |
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Preference number: 4 (lower is better) Translates to: ARAPLKPRAVSVNRETRRPCRVP*PLAMAG Trigger: TCCAGCCATGGCCAGGGGCCACGGAACCCGGCAGGG...CCGCCGTGTCTCTCTATTGACTGACACTGCTCGGGGTTTCAGGGGCGCCCTAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000673477.1 |
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| CDS-3UTR CCA 90 bp | GCTAGGGCGCCCCTGAAACCCCGAGCAGTGTCAGTCAATAGAGAGACACGGCGGGGGTTCCGTGGCCCCTaGCCATGGCTGGAAGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: ARAPLKPRAVSVNRETRRGFRGP*PWLEAG Trigger: CCCTGCTTCCAGCCATGGCCAGGGGCCACGGAACCC...CCGCCGTGTCTCTCTATTGACTGACACTGCTCGGGGTTTCAGGGGCGCCCTAGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000673477.1 |
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| CDS-3UTR GCA 90 bp | AGCATTCAGACCCCAACTCGGATGTGGCGCGAGGCTGATGTGAAGCACACCGCTACTCCGGATAGGGGGTaGTCGACCCCGCGCCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: SIQTPTRMWREADVKHTATPDRG*STPRPG Trigger: GCCTGGGCGCGGGGTCGAGCACCCCCTATCCGGAGT...AGCGGTGTGCTTCACATCAGCCTCGCGCCACATCCGAGTTGGGGTCTGAATGCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000673477.1 |
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| CDS-3UTR TCA 90 bp | GCTAGGGCGCCCCTGAAACCCCGAGCAGTGTCAGTCAATAGAGAGACACGGCGGCCAGGCTCCATGAGGTaGGGGTCTCGCCTTGGACTC | + |
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Preference number: 4 (lower is better) Translates to: ARAPLKPRAVSVNRETRRPGSMR*GSRLGL Trigger: GAGTCCAAGGCGAGACCCTCACCTCATGGAGCCTGG...CCGCCGTGTCTCTCTATTGACTGACACTGCTCGGGGTTTCAGGGGCGCCCTAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000673477.1 |
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| CDS-3UTR CCA 90 bp | GCTAGGGCGCCCCTGAAACCCCGAGCAGTGTCAGTCAATAGAGAGACACGGCGGGTGAGGGTCTCGCCTTaGACTCCGGATAGGGGGTGC | + |
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Preference number: 4 (lower is better) Translates to: ARAPLKPRAVSVNRETRRVRVSP*TPDRGC Trigger: GCACCCCCTATCCGGAGTCCAAGGCGAGACCCTCAC...CCGCCGTGTCTCTCTATTGACTGACACTGCTCGGGGTTTCAGGGGCGCCCTAGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000673477.1 |
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| CDS-3UTR TCA 90 bp | AGCATTCAGACCCCAACTCGGATGTGGCGCGAGGCTGATGTGAAGCACACCGCTCGTGGCCAGGCTCCATaGGGTGAGGGTCTCGCCTTG | + |
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Preference number: 4 (lower is better) Translates to: SIQTPTRMWREADVKHTARGQAP*GEGLAL Trigger: CAAGGCGAGACCCTCACCTCATGGAGCCTGGCCACG...AGCGGTGTGCTTCACATCAGCCTCGCGCCACATCCGAGTTGGGGTCTGAATGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000673477.1 |
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| CDS-3UTR TCA 90 bp | AGCATTCAGACCCCAACTCGGATGTGGCGCGAGGCTGATGTGAAGCACACCGCTACGCTAGGGCGCCCCTaGAACCCCGAGCAGTGTCAG | + |
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Preference number: 4 (lower is better) Translates to: SIQTPTRMWREADVKHTATLGRP*NPEQCQ Trigger: CTGACACTGCTCGGGGTTTCAGGGGCGCCCTAGCGT...AGCGGTGTGCTTCACATCAGCCTCGCGCCACATCCGAGTTGGGGTCTGAATGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000673477.1 |
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| CDS-3UTR TCA 90 bp | GCTAGGGCGCCCCTGAAACCCCGAGCAGTGTCAGTCAATAGAGAGACACGGCGGGGCGCGAGGCTGATGTaGAGCACACCGCTCTGTGAT | + |
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Preference number: 4 (lower is better) Translates to: ARAPLKPRAVSVNRETRRGARLM*STPLCD Trigger: ATCACAGAGCGGTGTGCTTCACATCAGCCTCGCGCC...CCGCCGTGTCTCTCTATTGACTGACACTGCTCGGGGTTTCAGGGGCGCCCTAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000673477.1 |
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| CDS-3UTR GCA 90 bp | GCTAGGGCGCCCCTGAAACCCCGAGCAGTGTCAGTCAATAGAGAGACACGGCGGGTCCTTGGAGGCATATaGCGTGGCCTGCCAGGACAC | + |
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Preference number: 4 (lower is better) Translates to: ARAPLKPRAVSVNRETRRVLGGI*RGLPGH Trigger: GTGTCCTGGCAGGCCACGGCATATGCCTCCAAGGAC...CCGCCGTGTCTCTCTATTGACTGACACTGCTCGGGGTTTCAGGGGCGCCCTAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000673477.1 |
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| CDS-3UTR CCA 90 bp | AGCATTCAGACCCCAACTCGGATGTGGCGCGAGGCTGATGTGAAGCACACCGCTCGTGGCCCCTGGCCATaGCTGGAAGCAGGGTTCAGG | + |
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Preference number: 4 (lower is better) Translates to: SIQTPTRMWREADVKHTARGPWP*LEAGFR Trigger: CCTGAACCCTGCTTCCAGCCATGGCCAGGGGCCACG...AGCGGTGTGCTTCACATCAGCCTCGCGCCACATCCGAGTTGGGGTCTGAATGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000673477.1 |
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| CDS-3UTR TCA 90 bp | AGCATTCAGACCCCAACTCGGATGTGGCGCGAGGCTGATGTGAAGCACACCGCTGGCGGGAGGATCTCCTaGGGCCAAGAGTTGGAGACC | + |
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Preference number: 4 (lower is better) Translates to: SIQTPTRMWREADVKHTAGGRIS*GQELET Trigger: GGTCTCCAACTCTTGGCCTCAGGAGATCCTCCCGCC...AGCGGTGTGCTTCACATCAGCCTCGCGCCACATCCGAGTTGGGGTCTGAATGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000673477.1 |
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| CDS-3UTR GCA 90 bp | GCTAGGGCGCCCCTGAAACCCCGAGCAGTGTCAGTCAATAGAGAGACACGGCGGGTGATCTCGGCTCACTaGAACCTCTCCCTCCCAGGT | + |
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Preference number: 4 (lower is better) Translates to: ARAPLKPRAVSVNRETRRVISAH*NLSLPG Trigger: ACCTGGGAGGGAGAGGTTGCAGTGAGCCGAGATCAC...CCGCCGTGTCTCTCTATTGACTGACACTGCTCGGGGTTTCAGGGGCGCCCTAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000673477.1 |
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| CDS-3UTR CCA 90 bp | GCTAGGGCGCCCCTGAAACCCCGAGCAGTGTCAGTCAATAGAGAGACACGGCGGGGGCCTAGTAGGGTATaGCTACTGGACAGGCTGAGG | + |
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Preference number: 4 (lower is better) Translates to: ARAPLKPRAVSVNRETRRGPSRV*LLDRLR Trigger: CCTCAGCCTGTCCAGTAGCCATACCCTACTAGGCCC...CCGCCGTGTCTCTCTATTGACTGACACTGCTCGGGGTTTCAGGGGCGCCCTAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000673477.1 |
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| CDS-3UTR TCA 90 bp | GCTAGGGCGCCCCTGAAACCCCGAGCAGTGTCAGTCAATAGAGAGACACGGCGGCGTCAATGCGGCTGTTaGTGGCACAGTCGAACTGCT | + |
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Preference number: 4 (lower is better) Translates to: ARAPLKPRAVSVNRETRRRQCGC*WHSRTA Trigger: AGCAGTTCGACTGTGCCATCAACAGCCGCATTGACG...CCGCCGTGTCTCTCTATTGACTGACACTGCTCGGGGTTTCAGGGGCGCCCTAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000673477.1 |
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| CDS-3UTR TCA 90 bp | GCTAGGGCGCCCCTGAAACCCCGAGCAGTGTCAGTCAATAGAGAGACACGGCGGCTCTTATGTCACCTTTaGCCCCAGGAGGACGCTAGG | + |
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Preference number: 4 (lower is better) Translates to: ARAPLKPRAVSVNRETRRLLCHL*PQEDAR Trigger: CCTAGCGTCCTCCTGGGGTCAAAGGTGACATAAGAG...CCGCCGTGTCTCTCTATTGACTGACACTGCTCGGGGTTTCAGGGGCGCCCTAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000673477.1 |
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| CDS-3UTR TCA 90 bp | AGCATTCAGACCCCAACTCGGATGTGGCGCGAGGCTGATGTGAAGCACACCGCTGATGTGGCGCGAGGCTaGTGTGAAGCACACCGCTCT | + |
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Preference number: 4 (lower is better) Translates to: SIQTPTRMWREADVKHTADVARG*CEAHRS Trigger: AGAGCGGTGTGCTTCACATCAGCCTCGCGCCACATC...AGCGGTGTGCTTCACATCAGCCTCGCGCCACATCCGAGTTGGGGTCTGAATGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000673477.1 |
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| CDS-3UTR GCA 90 bp | GCTAGGGCGCCCCTGAAACCCCGAGCAGTGTCAGTCAATAGAGAGACACGGCGGATGGCACAGTCGAACTaGTCAGGCAGATTGCTGGCC | + |
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Preference number: 4 (lower is better) Translates to: ARAPLKPRAVSVNRETRRMAQSN*SGRLLA Trigger: GGCCAGCAATCTGCCTGAGCAGTTCGACTGTGCCAT...CCGCCGTGTCTCTCTATTGACTGACACTGCTCGGGGTTTCAGGGGCGCCCTAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000673477.1 |
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| CDS-3UTR CCA 90 bp | GCTAGGGCGCCCCTGAAACCCCGAGCAGTGTCAGTCAATAGAGAGACACGGCGGCCTGAGGCCAAGAGTTaGAGACCAGCCTGGGCATTA | + |
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Preference number: 4 (lower is better) Translates to: ARAPLKPRAVSVNRETRRPEAKS*RPAWAL Trigger: TAATGCCCAGGCTGGTCTCCAACTCTTGGCCTCAGG...CCGCCGTGTCTCTCTATTGACTGACACTGCTCGGGGTTTCAGGGGCGCCCTAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000673477.1 |
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| CDS-3UTR TCA 90 bp | GCTAGGGCGCCCCTGAAACCCCGAGCAGTGTCAGTCAATAGAGAGACACGGCGGCCTTTAAAGAGGAATTaGGGCCAGGCTTGGTGGCTC | + |
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Preference number: 4 (lower is better) Translates to: ARAPLKPRAVSVNRETRRPLKRN*GQAWWL Trigger: GAGCCACCAAGCCTGGCCTCAATTCCTCTTTAAAGG...CCGCCGTGTCTCTCTATTGACTGACACTGCTCGGGGTTTCAGGGGCGCCCTAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000673477.1 |
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| CDS-3UTR CCA 90 bp | AGCATTCAGACCCCAACTCGGATGTGGCGCGAGGCTGATGTGAAGCACACCGCTGATTCAGGGCCTCCTTaGCGTAACGCGAGTGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: SIQTPTRMWREADVKHTADSGPP*RNASAP Trigger: TGGAGCACTCGCGTTACGCCAAGGAGGCCCTGAATC...AGCGGTGTGCTTCACATCAGCCTCGCGCCACATCCGAGTTGGGGTCTGAATGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000673477.1 |
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| CDS-3UTR CCA 90 bp | AGCATTCAGACCCCAACTCGGATGTGGCGCGAGGCTGATGTGAAGCACACCGCTACCCCAACTCGGATGTaGCGCGAGGCTGATGTGAAG | + |
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Preference number: 4 (lower is better) Translates to: SIQTPTRMWREADVKHTATPTRM*READVK Trigger: CTTCACATCAGCCTCGCGCCACATCCGAGTTGGGGT...AGCGGTGTGCTTCACATCAGCCTCGCGCCACATCCGAGTTGGGGTCTGAATGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000673477.1 |
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| CDS-3UTR TCA 90 bp | AGCATTCAGACCCCAACTCGGATGTGGCGCGAGGCTGATGTGAAGCACACCGCTAAACTCCTGACCTCATaGTTCACCCGCCTTGGCCTC | + |
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Preference number: 4 (lower is better) Translates to: SIQTPTRMWREADVKHTAKLLTS*FTRLGL Trigger: GAGGCCAAGGCGGGTGAATCATGAGGTCAGGAGTTT...AGCGGTGTGCTTCACATCAGCCTCGCGCCACATCCGAGTTGGGGTCTGAATGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000673477.1 |
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| CDS-3UTR CCA 90 bp | AGCATTCAGACCCCAACTCGGATGTGGCGCGAGGCTGATGTGAAGCACACCGCTCACTGCACTCCAGCCTaGGCTCAGAGTAAGAACCCA | + |
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Preference number: 4 (lower is better) Translates to: SIQTPTRMWREADVKHTAHCTPA*AQSKNP Trigger: TGGGTTCTTACTCTGAGCCCAGGCTGGAGTGCAGTG...AGCGGTGTGCTTCACATCAGCCTCGCGCCACATCCGAGTTGGGGTCTGAATGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000673477.1 |
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| CDS-3UTR TCA 90 bp | AGCATTCAGACCCCAACTCGGATGTGGCGCGAGGCTGATGTGAAGCACACCGCTTGGCCAGGACCAGCATaGATTTGTTGCTGTGTTGGC | + |
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Preference number: 4 (lower is better) Translates to: SIQTPTRMWREADVKHTAWPGPA*ICCCVG Trigger: GCCAACACAGCAACAAATTCATGCTGGTCCTGGCCA...AGCGGTGTGCTTCACATCAGCCTCGCGCCACATCCGAGTTGGGGTCTGAATGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000673477.1 |
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| CDS-3UTR GCA 90 bp | GCTAGGGCGCCCCTGAAACCCCGAGCAGTGTCAGTCAATAGAGAGACACGGCGGTCATTGAGAAGTTGCTaGTGCTTCAGTTGGTCCTCG | + |
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Preference number: 4 (lower is better) Translates to: ARAPLKPRAVSVNRETRRSLRSC*CFSWSS Trigger: CGAGGACCAACTGAAGCAGCAGCAACTTCTCAATGA...CCGCCGTGTCTCTCTATTGACTGACACTGCTCGGGGTTTCAGGGGCGCCCTAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000673477.1 |
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| CDS-3UTR GCA 90 bp | GCTAGGGCGCCCCTGAAACCCCGAGCAGTGTCAGTCAATAGAGAGACACGGCGGTCCTCATTGAGAAGTTaGTGCTGCTTCAGTTGGTCC | + |
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Preference number: 4 (lower is better) Translates to: ARAPLKPRAVSVNRETRRSSLRS*CCFSWS Trigger: GGACCAACTGAAGCAGCAGCAACTTCTCAATGAGGA...CCGCCGTGTCTCTCTATTGACTGACACTGCTCGGGGTTTCAGGGGCGCCCTAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000673477.1 |
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| CDS-3UTR CCA 90 bp | AGCATTCAGACCCCAACTCGGATGTGGCGCGAGGCTGATGTGAAGCACACCGCTTGCTTATCTCCTCAGTaGCTCGCTTCCGAAGGAAGG | + |
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Preference number: 4 (lower is better) Translates to: SIQTPTRMWREADVKHTACLSPQ*LASEGR Trigger: CCTTCCTTCGGAAGCGAGCCACTGAGGAGATAAGCA...AGCGGTGTGCTTCACATCAGCCTCGCGCCACATCCGAGTTGGGGTCTGAATGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000673477.1 |
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| CDS-3UTR CAA 90 bp | GCTAGGGCGCCCCTGAAACCCCGAGCAGTGTCAGTCAATAGAGAGACACGGCGGGTGGCTCTGAGGTCCTaGCTTATCTCCTCAGTGGCT | + |
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Preference number: 5 (lower is better) Translates to: ARAPLKPRAVSVNRETRRVALRS*LISSVA Trigger: AGCCACTGAGGAGATAAGCAAGGACCTCAGAGCCAC...CCGCCGTGTCTCTCTATTGACTGACACTGCTCGGGGTTTCAGGGGCGCCCTAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000673477.1 |
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| CDS-3UTR CAA 90 bp | GCTAGGGCGCCCCTGAAACCCCGAGCAGTGTCAGTCAATAGAGAGACACGGCGGACGTCAATGCGGCTGTaGATGGCACAGTCGAACTGC | + |
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Preference number: 5 (lower is better) Translates to: ARAPLKPRAVSVNRETRRTSMRL*MAQSNC Trigger: GCAGTTCGACTGTGCCATCAACAGCCGCATTGACGT...CCGCCGTGTCTCTCTATTGACTGACACTGCTCGGGGTTTCAGGGGCGCCCTAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000673477.1 |
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| CDS-3UTR CAA 90 bp | AGCATTCAGACCCCAACTCGGATGTGGCGCGAGGCTGATGTGAAGCACACCGCTTGCAGGGCGAGTTTCTaGGCAAACAGCGTCTTCCCG | + |
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Preference number: 5 (lower is better) Translates to: SIQTPTRMWREADVKHTACRASF*ANSVFP Trigger: CGGGAAGACGCTGTTTGCCAAGAAACTCGCCCTGCA...AGCGGTGTGCTTCACATCAGCCTCGCGCCACATCCGAGTTGGGGTCTGAATGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000673477.1 |
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| CDS-3UTR CAA 90 bp | AGCATTCAGACCCCAACTCGGATGTGGCGCGAGGCTGATGTGAAGCACACCGCTACCAGCATGAATTTGTaGCTGTGTTGGCCCATGTGG | + |
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Preference number: 5 (lower is better) Translates to: SIQTPTRMWREADVKHTATSMNL*LCWPMW Trigger: CCACATGGGCCAACACAGCAACAAATTCATGCTGGT...AGCGGTGTGCTTCACATCAGCCTCGCGCCACATCCGAGTTGGGGTCTGAATGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000673477.1 |
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| CDS-3UTR CAA 90 bp | AGCATTCAGACCCCAACTCGGATGTGGCGCGAGGCTGATGTGAAGCACACCGCTAGGACCAGCATGAATTaGTTGCTGTGTTGGCCCATG | + |
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Preference number: 5 (lower is better) Translates to: SIQTPTRMWREADVKHTARTSMN*LLCWPM Trigger: CATGGGCCAACACAGCAACAAATTCATGCTGGTCCT...AGCGGTGTGCTTCACATCAGCCTCGCGCCACATCCGAGTTGGGGTCTGAATGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000673477.1 |
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| CDS-3UTR CAA 90 bp | AGCATTCAGACCCCAACTCGGATGTGGCGCGAGGCTGATGTGAAGCACACCGCTTCCTTTAAAGAGGAATaGAGGCCAGGCTTGGTGGCT | + |
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Preference number: 5 (lower is better) Translates to: SIQTPTRMWREADVKHTASFKEE*RPGLVA Trigger: AGCCACCAAGCCTGGCCTCAATTCCTCTTTAAAGGA...AGCGGTGTGCTTCACATCAGCCTCGCGCCACATCCGAGTTGGGGTCTGAATGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000673477.1 |
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| CDS TCA 72 bp | GTGGCAGGCTCCTGTAGTCCCAGCTGCTCGGAAGGCTaGGGCAGGAGGTTGAACCCGGGAGGTGGAGGTTGC | + |
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Preference number: 6 (lower is better) Translates to: VAGSCSPSCSEG*GRRLNPGGGGC Trigger: GCAACCTCCACCTCCCGGGTTCAACCTCCTGCCTCAGCCTTCCGAGCAGCTGGGACTACAGGAGCCTGCCAC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000472194.6 |
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| CDS CCA 72 bp | ACAGGCAGCTGGCCTACACCCATGCCATATGGTGCCTaGATTGGGGGCCGGGTGAGGCGGGACACTCACCGT | + |
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Preference number: 6 (lower is better) Translates to: TGSWPTPMPYGA*IGGRVRRDTHR Trigger: ACGGTGAGTGTCCCGCCTCACCCGGCCCCCAATCCAGGCACCATATGGCATGGGTGTAGGCCAGCTGCCTGT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000474481.1 |
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| CDS GCA 72 bp | GAAGACAGGCAGCTGGCCTACACCCATGCCATATGGTaGCTGGATTGGGGGCCGGGTGAGGCGGGACACTCA | + |
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Preference number: 6 (lower is better) Translates to: EDRQLAYTHAIW*LDWGPGEAGHS Trigger: TGAGTGTCCCGCCTCACCCGGCCCCCAATCCAGGCACCATATGGCATGGGTGTAGGCCAGCTGCCTGTCTTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000474481.1 |
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| CDS GCA 72 bp | CTGCAACCTCCGCCTTCCAGGTTCAAGCAGTTCTCCTaGCTCAGCCTCCCGAGTGACTGGGATTACAGGCTC | + |
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Preference number: 6 (lower is better) Translates to: LQPPPSRFKQFS*LSLPSDWDYRL Trigger: GAGCCTGTAATCCCAGTCACTCGGGAGGCTGAGGCAGGAGAACTGCTTGAACCTGGAAGGCGGAGGTTGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485748.5 |
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