Pregenerated sensors for ATAD3A (Homo sapiens)
Ensembl gene IDs: ENSG00000197785Ensembl transcript IDs: ENST00000339113.9, ENST00000378755.9, ENST00000378756.8, ENST00000536055.6
Found 22 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCCGCCAGGTTCCCTCCTCCCTCCTCTCTCAGGGTCACCAGTGTGTaGAAGATCGGGGCATGCCGGCCACAGGGGGAAGCAGGGTTCAGG | + |
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Preference number: 1 (lower is better) Translates to: PARFPPPSSLRVTSV*KIGACRPQGEAGFR Trigger: CCTGAACCCTGCTTCCCCCTGTGGCCGGCATGCCCCGATCTTTCACACACTGGTGACCCTGAGAGAGGAGGGAGGAGGGAACCTGGCGGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000339113.9 ENST00000378755.9 ENST00000378756.8 ENST00000536055.6 |
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| 3UTR-3UTR TCA 90 bp | TCCTCCCTCCTCTCTCAGGGTCACCAGTGTGTGAAAGATCGGGGCATGCCGGCCGCTCCACGGTGGCTGTaGTCCCCACTGAAACCAGGA | + |
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Preference number: 2 (lower is better) Translates to: SSLLSQGHQCVKDRGMPAAPRWL*SPLKPG Trigger: TCCTGGTTTCAGTGGGGATCACAGCCACCGTGGAGC...GGCCGGCATGCCCCGATCTTTCACACACTGGTGACCCTGAGAGAGGAGGGAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000339113.9 |
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| 3UTR-3UTR TCA 90 bp | TCCTCCCTCCTCTCTCAGGGTCACCAGTGTGTGAAAGATCGGGGCATGCCGGCCAGGTGCCAGCCGTCCTaGTGGACTCCAAGACGGTCT | + |
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Preference number: 2 (lower is better) Translates to: SSLLSQGHQCVKDRGMPARCQPS*WTPRRS Trigger: AGACCGTCTTGGAGTCCATCAGGACGGCTGGCACCT...GGCCGGCATGCCCCGATCTTTCACACACTGGTGACCCTGAGAGAGGAGGGAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339113.9 |
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| 3UTR-3UTR CCA 90 bp | TCCTCCCTCCTCTCTCAGGGTCACCAGTGTGTGAAAGATCGGGGCATGCCGGCCTCAGCCCAGCCACCGTaGCTGTCACTTTGTCCCAGT | + |
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Preference number: 2 (lower is better) Translates to: SSLLSQGHQCVKDRGMPASAQPP*LSLCPS Trigger: ACTGGGACAAAGTGACAGCCACGGTGGCTGGGCTGA...GGCCGGCATGCCCCGATCTTTCACACACTGGTGACCCTGAGAGAGGAGGGAGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339113.9 |
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| 3UTR-3UTR CCA 90 bp | TCCTCCCTCCTCTCTCAGGGTCACCAGTGTGTGAAAGATCGGGGCATGCCGGCCGGCCGGCGACAAGCGTaGCATTCTTGGCTGAGTAGA | + |
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Preference number: 2 (lower is better) Translates to: SSLLSQGHQCVKDRGMPAGRRQA*HSWLSR Trigger: TCTACTCAGCCAAGAATGCCACGCTTGTCGCCGGCC...GGCCGGCATGCCCCGATCTTTCACACACTGGTGACCCTGAGAGAGGAGGGAGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339113.9 |
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| CDS-3UTR CCA 90 bp | TCCTCCCTCCTCTCTCAGGGTCACCAGTGTGTGAAAGATCGGGGCATGCCGGCCAGCCGCCGGCTGACCTaGATGGGGTGCCGCAGCGCC | + |
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Preference number: 4 (lower is better) Translates to: SSLLSQGHQCVKDRGMPASRRLT*MGCRSA Trigger: GGCGCTGCGGCACCCCATCCAGGTCAGCCGGCGGCT...GGCCGGCATGCCCCGATCTTTCACACACTGGTGACCCTGAGAGAGGAGGGAGGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000339113.9 ENST00000378755.9 ENST00000378756.8 ENST00000536055.6 |
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| CDS-3UTR CCA 90 bp | TCCTCCCTCCTCTCTCAGGGTCACCAGTGTGTGAAAGATCGGGGCATGCCGGCCTCAGGCTGCCCCACCTaGGTCTGGCCCTGGCAGGCG | + |
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Preference number: 4 (lower is better) Translates to: SSLLSQGHQCVKDRGMPASGCPT*VWPWQA Trigger: CGCCTGCCAGGGCCAGACCCAGGTGGGGCAGCCTGA...GGCCGGCATGCCCCGATCTTTCACACACTGGTGACCCTGAGAGAGGAGGGAGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000339113.9 ENST00000378755.9 ENST00000378756.8 ENST00000536055.6 |
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| CDS-3UTR CCA 90 bp | TCCTCCCTCCTCTCTCAGGGTCACCAGTGTGTGAAAGATCGGGGCATGCCGGCCTACTGGGCCCTGGCCTaGTGCTGCCGGGTCTCCTCG | + |
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Preference number: 4 (lower is better) Translates to: SSLLSQGHQCVKDRGMPAYWALA*CCRVSS Trigger: CGAGGAGACCCGGCAGCACCAGGCCAGGGCCCAGTA...GGCCGGCATGCCCCGATCTTTCACACACTGGTGACCCTGAGAGAGGAGGGAGGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000339113.9 ENST00000378755.9 ENST00000378756.8 ENST00000536055.6 |
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| CDS-3UTR CCA 90 bp | TCCTCCCTCCTCTCTCAGGGTCACCAGTGTGTGAAAGATCGGGGCATGCCGGCCAAGACATCACCTGCCTaGCTCCTGCTGCCCCGGGGG | + |
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Preference number: 4 (lower is better) Translates to: SSLLSQGHQCVKDRGMPAKTSPA*LLLPRG Trigger: CCCCCGGGGCAGCAGGAGCCAGGCAGGTGATGTCTT...GGCCGGCATGCCCCGATCTTTCACACACTGGTGACCCTGAGAGAGGAGGGAGGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000339113.9 ENST00000378755.9 ENST00000378756.8 ENST00000536055.6 |
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| CDS-3UTR TCA 90 bp | TCCTCCCTCCTCTCTCAGGGTCACCAGTGTGTGAAAGATCGGGGCATGCCGGCCCTTCCAGGCTGGGACTaGGCACAACACCCTCCAGCG | + |
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Preference number: 4 (lower is better) Translates to: SSLLSQGHQCVKDRGMPALPGWD*AQHPPA Trigger: CGCTGGAGGGTGTTGTGCTCAGTCCCAGCCTGGAAG...GGCCGGCATGCCCCGATCTTTCACACACTGGTGACCCTGAGAGAGGAGGGAGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000339113.9 ENST00000378755.9 ENST00000378756.8 ENST00000536055.6 |
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| CDS-3UTR CCA 90 bp | TCCTCCCTCCTCTCTCAGGGTCACCAGTGTGTGAAAGATCGGGGCATGCCGGCCCTTGATACTGGGCCCTaGCCTGGTGCTGCCGGGTCT | + |
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Preference number: 4 (lower is better) Translates to: SSLLSQGHQCVKDRGMPALDTGP*PGAAGS Trigger: AGACCCGGCAGCACCAGGCCAGGGCCCAGTATCAAG...GGCCGGCATGCCCCGATCTTTCACACACTGGTGACCCTGAGAGAGGAGGGAGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000339113.9 ENST00000378755.9 ENST00000378756.8 ENST00000536055.6 |
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| CDS-3UTR TCA 90 bp | TCCTCCCTCCTCTCTCAGGGTCACCAGTGTGTGAAAGATCGGGGCATGCCGGCCAGGGTCACCAGTGTGTaGAAGATCGGGGCATGCCGG | + |
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Preference number: 4 (lower is better) Translates to: SSLLSQGHQCVKDRGMPARVTSV*KIGACR Trigger: CCGGCATGCCCCGATCTTTCACACACTGGTGACCCT...GGCCGGCATGCCCCGATCTTTCACACACTGGTGACCCTGAGAGAGGAGGGAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000339113.9 ENST00000378755.9 ENST00000378756.8 ENST00000536055.6 |
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| CDS-3UTR TCA 90 bp | TCCTCCCTCCTCTCTCAGGGTCACCAGTGTGTGAAAGATCGGGGCATGCCGGCCGTCCTTGGCATAACCTaGCCCGCTCCTGACAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: SSLLSQGHQCVKDRGMPAVLGIT*PAPDSC Trigger: GCAGCTGTCAGGAGCGGGTCAGGTTATGCCAAGGAC...GGCCGGCATGCCCCGATCTTTCACACACTGGTGACCCTGAGAGAGGAGGGAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000536055.6 |
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| CDS-3UTR CCA 90 bp | TCCTCCCTCCTCTCTCAGGGTCACCAGTGTGTGAAAGATCGGGGCATGCCGGCCCTGTGGATCTCCCTGTaGACTCAGGATGGGGAGGGC | + |
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Preference number: 4 (lower is better) Translates to: SSLLSQGHQCVKDRGMPALWISL*TQDGEG Trigger: GCCCTCCCCATCCTGAGTCCACAGGGAGATCCACAG...GGCCGGCATGCCCCGATCTTTCACACACTGGTGACCCTGAGAGAGGAGGGAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000339113.9 ENST00000378755.9 ENST00000378756.8 ENST00000536055.6 |
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| CDS-3UTR GCA 90 bp | TCCTCCCTCCTCTCTCAGGGTCACCAGTGTGTGAAAGATCGGGGCATGCCGGCCAACAAAGACATCACCTaGCTGGCTCCTGCTGCCCCG | + |
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Preference number: 4 (lower is better) Translates to: SSLLSQGHQCVKDRGMPANKDIT*LAPAAP Trigger: CGGGGCAGCAGGAGCCAGGCAGGTGATGTCTTTGTT...GGCCGGCATGCCCCGATCTTTCACACACTGGTGACCCTGAGAGAGGAGGGAGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000339113.9 ENST00000378755.9 ENST00000378756.8 ENST00000536055.6 |
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| CDS-3UTR CCA 90 bp | TCCTCCCTCCTCTCTCAGGGTCACCAGTGTGTGAAAGATCGGGGCATGCCGGCCGCAGGGCGAGTTTCTTaGCAAACAGCGTCTTCCCGG | + |
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Preference number: 4 (lower is better) Translates to: SSLLSQGHQCVKDRGMPAAGRVS*QTASSR Trigger: CCGGGAAGACGCTGTTTGCCAAGAAACTCGCCCTGC...GGCCGGCATGCCCCGATCTTTCACACACTGGTGACCCTGAGAGAGGAGGGAGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000339113.9 ENST00000378755.9 ENST00000378756.8 ENST00000536055.6 |
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| CDS-3UTR CCA 90 bp | TCCTCCCTCCTCTCTCAGGGTCACCAGTGTGTGAAAGATCGGGGCATGCCGGCCAGGCTCCGTGAGCTGTaGATCTCCCTGTGGACTCAG | + |
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Preference number: 4 (lower is better) Translates to: SSLLSQGHQCVKDRGMPARLREL*ISLWTQ Trigger: CTGAGTCCACAGGGAGATCCACAGCTCACGGAGCCT...GGCCGGCATGCCCCGATCTTTCACACACTGGTGACCCTGAGAGAGGAGGGAGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000339113.9 ENST00000378755.9 ENST00000378756.8 ENST00000536055.6 |
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| CDS-3UTR CCA 90 bp | TCCTCCCTCCTCTCTCAGGGTCACCAGTGTGTGAAAGATCGGGGCATGCCGGCCGATTCAGGGCGTCCTTaGCATAACCTGACCCGCTCC | + |
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Preference number: 4 (lower is better) Translates to: SSLLSQGHQCVKDRGMPADSGRP*HNLTRS Trigger: GGAGCGGGTCAGGTTATGCCAAGGACGCCCTGAATC...GGCCGGCATGCCCCGATCTTTCACACACTGGTGACCCTGAGAGAGGAGGGAGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000536055.6 |
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| CDS-3UTR CCA 90 bp | TCCTCCCTCCTCTCTCAGGGTCACCAGTGTGTGAAAGATCGGGGCATGCCGGCCGATTCAGGGCGTCCTTaGCATAACGCGAGTGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: SSLLSQGHQCVKDRGMPADSGRP*HNASAP Trigger: TGGAGCACTCGCGTTATGCCAAGGACGCCCTGAATC...GGCCGGCATGCCCCGATCTTTCACACACTGGTGACCCTGAGAGAGGAGGGAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000339113.9 ENST00000378755.9 ENST00000378756.8 |
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| CDS-3UTR CCA 90 bp | TCCTCCCTCCTCTCTCAGGGTCACCAGTGTGTGAAAGATCGGGGCATGCCGGCCCGCTTATCTTCTCGGTaGCTCGCTTCCGAAGGAAGG | + |
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Preference number: 4 (lower is better) Translates to: SSLLSQGHQCVKDRGMPARLSSR*LASEGR Trigger: CCTTCCTTCGGAAGCGAGCCACCGAGAAGATAAGCG...GGCCGGCATGCCCCGATCTTTCACACACTGGTGACCCTGAGAGAGGAGGGAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000339113.9 ENST00000378755.9 ENST00000378756.8 ENST00000536055.6 |
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| CDS-3UTR CAA 90 bp | TCCTCCCTCCTCTCTCAGGGTCACCAGTGTGTGAAAGATCGGGGCATGCCGGCCAGGACCAGCATGAACTaGTTGCTGTGCTGGCCCGTG | + |
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Preference number: 5 (lower is better) Translates to: SSLLSQGHQCVKDRGMPARTSMN*LLCWPV Trigger: CACGGGCCAGCACAGCAACAAGTTCATGCTGGTCCT...GGCCGGCATGCCCCGATCTTTCACACACTGGTGACCCTGAGAGAGGAGGGAGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000339113.9 ENST00000378755.9 ENST00000378756.8 ENST00000536055.6 |
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| CDS-3UTR CAA 90 bp | TCCTCCCTCCTCTCTCAGGGTCACCAGTGTGTGAAAGATCGGGGCATGCCGGCCGCTTCCAGCCGCATTTaGAGCTTGGACTGTTGCTCC | + |
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Preference number: 5 (lower is better) Translates to: SSLLSQGHQCVKDRGMPAASSRI*SLDCCS Trigger: GGAGCAACAGTCCAAGCTCAAAATGCGGCTGGAAGC...GGCCGGCATGCCCCGATCTTTCACACACTGGTGACCCTGAGAGAGGAGGGAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378755.9 |
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