Pregenerated sensors for ASXL3-DT (Homo sapiens)
Ensembl gene IDs: ENSG00000267642Ensembl transcript IDs: ENST00000591558.1
Found 25 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CTGAGTTGGAGGGAGAGGGGTCTCGCGAGGGTTTCAGGGCGTGGCTaGAGTAGGGGGCGCGCGGCGAGTGTGCACGGGTGTGCGCGCGCG | + |
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Preference number: 5 (lower is better) Translates to: LSWRERGLARVSGRG*SRGRAASVHGCARA Trigger: CGCGCGCGCACACCCGTGCACACTCGCCGCGCGCCCCCTACTCCAGCCACGCCCTGAAACCCTCGCGAGACCCCTCTCCCTCCAACTCAG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000591558.1 |
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| CDS CCA 90 bp | ACCGTGTCCGCGGCTTTCGGCCTGAGCGGGACAGCGGGAAGCGGGTaGAACGGCCTGCACGGAGTGGGCAGCGCCCCAGGAATTTGGGGG | + |
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Preference number: 5 (lower is better) Translates to: TVSAAFGLSGTAGSG*NGLHGVGSAPGIWG Trigger: CCCCCAAATTCCTGGGGCGCTGCCCACTCCGTGCAGGCCGTTCCACCCGCTTCCCGCTGTCCCGCTCAGGCCGAAAGCCGCGGACACGGT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000591558.1 |
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| CDS TCA 90 bp | CTCCTACACAAGTTCCAAAGGCCACCGTGTCCGCGGCTTTCGGCCTaGGCGGGACAGCGGGAAGCGGGTGGAACGGCCTGCACGGAGTGG | + |
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Preference number: 5 (lower is better) Translates to: LLHKFQRPPCPRLSA*AGQREAGGTACTEW Trigger: CCACTCCGTGCAGGCCGTTCCACCCGCTTCCCGCTGTCCCGCTCAGGCCGAAAGCCGCGGACACGGTGGCCTTTGGAACTTGTGTAGGAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000591558.1 |
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| CDS TCA 90 bp | TTCCTTCATTCCTTTGCACTCCTCTCCCATCAGACTTCTCCACTGTaGGCTAATGCCCAATCAGATATTGCAGGCAAGCCCCACAACTAC | + |
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Preference number: 5 (lower is better) Translates to: FLHSFALLSHQTSPL*ANAQSDIAGKPHNY Trigger: GTAGTTGTGGGGCTTGCCTGCAATATCTGATTGGGCATTAGCTCACAGTGGAGAAGTCTGATGGGAGAGGAGTGCAAAGGAATGAAGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000591558.1 |
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| CDS TCA 90 bp | TGGCTATCCTTGCTCTTTCTTGACAGAGTAATCTTCCCACAGGATTaGATCTGTTGCATGTCTGCTCTTCCCGGGCAGATCTCCTGGAAA | + |
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Preference number: 5 (lower is better) Translates to: WLSLLFLDRVIFPQD*ICCMSALPGQISWK Trigger: TTTCCAGGAGATCTGCCCGGGAAGAGCAGACATGCAACAGATTCAATCCTGTGGGAAGATTACTCTGTCAAGAAAGAGCAAGGATAGCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000591558.1 |
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| CDS GCA 90 bp | GAAGAAGTATGTAGCACAACCTCTATTATAACTTCCAATGGGTCTTaGAACAGAGTCATACTTGGGATCCAAAGCCAACCATGGATATTA | + |
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Preference number: 5 (lower is better) Translates to: EEVCSTTSIITSNGS*NRVILGIQSQPWIL Trigger: TAATATCCATGGTTGGCTTTGGATCCCAAGTATGACTCTGTTGCAAGACCCATTGGAAGTTATAATAGAGGTTGTGCTACATACTTCTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000591558.1 |
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| CDS TCA 90 bp | TTTAACACTCTTGATCTCATTGCTATCATCTTAATTTCTAATCCATaGGCCTCATGGTGCAATCCTGTGAATGGCTATCCTTGCTCTTTC | + |
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Preference number: 5 (lower is better) Translates to: FNTLDLIAIILISNP*ASWCNPVNGYPCSF Trigger: GAAAGAGCAAGGATAGCCATTCACAGGATTGCACCATGAGGCTCATGGATTAGAAATTAAGATGATAGCAATGAGATCAAGAGTGTTAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000591558.1 |
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| CDS CCA 90 bp | AACCTCTATTATAACTTCCAATGGGTCTTGCAACAGAGTCATACTTaGGATCCAAAGCCAACCATGGATATTATGTTCCTTCATTCCTTT | + |
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Preference number: 5 (lower is better) Translates to: NLYYNFQWVLQQSHT*DPKPTMDIMFLHSF Trigger: AAAGGAATGAAGGAACATAATATCCATGGTTGGCTTTGGATCCCAAGTATGACTCTGTTGCAAGACCCATTGGAAGTTATAATAGAGGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000591558.1 |
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| CDS TCA 90 bp | CATATTGTCTCTGCTATTGGAGACTGCTTGAATTACACCCAAGTTTaGAATATCTTTTGCAAATATCTTTTACATCTATGGTCGCCAACA | + |
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Preference number: 5 (lower is better) Translates to: HIVSAIGDCLNYTQV*NIFCKYLLHLWSPT Trigger: TGTTGGCGACCATAGATGTAAAAGATATTTGCAAAAGATATTTCAAACTTGGGTGTAATTCAAGCAGTCTCCAATAGCAGAGACAATATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000591558.1 |
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| CDS GCA 72 bp | CAGGGCGTGGCTGGAGTAGGGGGCGCGCGGCGAGTGTaGACGGGTGTGCGCGCGCGAGAGGGCGAGTGTGAG | + |
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Preference number: 6 (lower is better) Translates to: QGVAGVGGARRV*TGVRAREGECE Trigger: CTCACACTCGCCCTCTCGCGCGCGCACACCCGTGCACACTCGCCGCGCGCCCCCTACTCCAGCCACGCCCTG 75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000591558.1 |
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| CDS CCA 72 bp | GCGGCTTTCGGCCTGAGCGGGACAGCGGGAAGCGGGTaGAACGGCCTGCACGGAGTGGGCAGCGCCCCAGGA | + |
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Preference number: 6 (lower is better) Translates to: AAFGLSGTAGSG*NGLHGVGSAPG Trigger: TCCTGGGGCGCTGCCCACTCCGTGCAGGCCGTTCCACCCGCTTCCCGCTGTCCCGCTCAGGCCGAAAGCCGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000591558.1 |
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| CDS CCA 72 bp | AGGGAGAGGGGTCTCGCGAGGGTTTCAGGGCGTGGCTaGAGTAGGGGGCGCGCGGCGAGTGTGCACGGGTGT | + |
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Preference number: 6 (lower is better) Translates to: RERGLARVSGRG*SRGRAASVHGC Trigger: ACACCCGTGCACACTCGCCGCGCGCCCCCTACTCCAGCCACGCCCTGAAACCCTCGCGAGACCCCTCTCCCT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000591558.1 |
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| CDS TCA 72 bp | AAGTTCCAAAGGCCACCGTGTCCGCGGCTTTCGGCCTaGGCGGGACAGCGGGAAGCGGGTGGAACGGCCTGC | + |
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Preference number: 6 (lower is better) Translates to: KFQRPPCPRLSA*AGQREAGGTAC Trigger: GCAGGCCGTTCCACCCGCTTCCCGCTGTCCCGCTCAGGCCGAAAGCCGCGGACACGGTGGCCTTTGGAACTT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000591558.1 |
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| CDS TCA 72 bp | CCCCACACTTTGGGAGCTCAAGACAGGCAGATCACTTaGGGCCAGGAATTCGGGACCAGCCTGGCCAACATG | + |
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Preference number: 6 (lower is better) Translates to: PHTLGAQDRQIT*GQEFGTSLANM Trigger: CATGTTGGCCAGGCTGGTCCCGAATTCCTGGCCTCAAGTGATCTGCCTGTCTTGAGCTCCCAAAGTGTGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000591558.1 |
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| CDS CCA 72 bp | ATCTGTTGCATGTCTGCTCTTCCCGGGCAGATCTCCTaGAAAGATCTTCCTGAGAACTGTTGCAGGGTGAGC | + |
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Preference number: 6 (lower is better) Translates to: ICCMSALPGQIS*KDLPENCCRVS Trigger: GCTCACCCTGCAACAGTTCTCAGGAAGATCTTTCCAGGAGATCTGCCCGGGAAGAGCAGACATGCAACAGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000591558.1 |
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| CDS TCA 72 bp | TCCTTTGCACTCCTCTCCCATCAGACTTCTCCACTGTaGGCTAATGCCCAATCAGATATTGCAGGCAAGCCC | + |
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Preference number: 6 (lower is better) Translates to: SFALLSHQTSPL*ANAQSDIAGKP Trigger: GGGCTTGCCTGCAATATCTGATTGGGCATTAGCTCACAGTGGAGAAGTCTGATGGGAGAGGAGTGCAAAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000591558.1 |
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| CDS CAA 90 bp | CTTGGGGTATTTGGCTGGCATAGCACAGTAAGTGTTGTGTCTTCCTaGGCTGTCCCTTTCCTGGTCCTTTGCTTAGAGACAGTAGACCTT | + |
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Preference number: 6 (lower is better) Translates to: LGVFGWHSTVSVVSS*AVPFLVLCLETVDL Trigger: AAGGTCTACTGTCTCTAAGCAAAGGACCAGGAAAGGGACAGCCAAGGAAGACACAACACTTACTGTGCTATGCCAGCCAAATACCCCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000591558.1 |
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| CDS GCA 72 bp | AGTAATCTTCCCACAGGATTGAATCTGTTGCATGTCTaGTCTTCCCGGGCAGATCTCCTGGAAAGATCTTCC | + |
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Preference number: 6 (lower is better) Translates to: SNLPTGLNLLHV*SSRADLLERSS Trigger: GGAAGATCTTTCCAGGAGATCTGCCCGGGAAGAGCAGACATGCAACAGATTCAATCCTGTGGGAAGATTACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000591558.1 |
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| CDS CAA 72 bp | TTTGGCTGGCATAGCACAGTAAGTGTTGTGTCTTCCTaGGCTGTCCCTTTCCTGGTCCTTTGCTTAGAGACA | + |
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Preference number: 6 (lower is better) Translates to: FGWHSTVSVVSS*AVPFLVLCLET Trigger: TGTCTCTAAGCAAAGGACCAGGAAAGGGACAGCCAAGGAAGACACAACACTTACTGTGCTATGCCAGCCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000591558.1 |
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| CDS GCA 72 bp | TGTAGCACAACCTCTATTATAACTTCCAATGGGTCTTaGAACAGAGTCATACTTGGGATCCAAAGCCAACCA | + |
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Preference number: 6 (lower is better) Translates to: CSTTSIITSNGS*NRVILGIQSQP Trigger: TGGTTGGCTTTGGATCCCAAGTATGACTCTGTTGCAAGACCCATTGGAAGTTATAATAGAGGTTGTGCTACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000591558.1 |
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| CDS CCA 72 bp | TACAAAATCCAGGGAACTCATTTATGTACTGTCCCTTaGGTCCCCAAATTCTCAAGCCAATTTACTTCTTCC | + |
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Preference number: 6 (lower is better) Translates to: YKIQGTHLCTVP*VPKFSSQFTSS Trigger: GGAAGAAGTAAATTGGCTTGAGAATTTGGGGACCCAAGGGACAGTACATAAATGAGTTCCCTGGATTTTGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000591558.1 |
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| CDS CCA 72 bp | TATAACTTCCAATGGGTCTTGCAACAGAGTCATACTTaGGATCCAAAGCCAACCATGGATATTATGTTCCTT | + |
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Preference number: 6 (lower is better) Translates to: YNFQWVLQQSHT*DPKPTMDIMFL Trigger: AAGGAACATAATATCCATGGTTGGCTTTGGATCCCAAGTATGACTCTGTTGCAAGACCCATTGGAAGTTATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000591558.1 |
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| CDS CAA 72 bp | ATACAAAATCCAGGGAACTCATTTATGTACTGTCCCTaGGGTCCCCAAATTCTCAAGCCAATTTACTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: IQNPGNSFMYCP*GPQILKPIYFF Trigger: GAAGAAGTAAATTGGCTTGAGAATTTGGGGACCCAAGGGACAGTACATAAATGAGTTCCCTGGATTTTGTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000591558.1 |
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| CDS GCA 72 bp | AAATATCTTTTACATCTATGGTCGCCAACAAAAAGATaGACATATCCCAGGGAACACGTAAGATCACGTGTT | + |
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Preference number: 6 (lower is better) Translates to: KYLLHLWSPTKR*TYPREHVRSRV Trigger: AACACGTGATCTTACGTGTTCCCTGGGATATGTGCATCTTTTTGTTGGCGACCATAGATGTAAAAGATATTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000591558.1 |
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| CDS CAA 90 bp | TGCTATTGGAGACTGCTTGAATTACACCCAAGTTTGAAATATCTTTaGCAAATATCTTTTACATCTATGGTCGCCAACAAAAAGATGCAC | + |
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Preference number: 6 (lower is better) Translates to: CYWRLLELHPSLKYL*QISFTSMVANKKMH Trigger: GTGCATCTTTTTGTTGGCGACCATAGATGTAAAAGATATTTGCAAAAGATATTTCAAACTTGGGTGTAATTCAAGCAGTCTCCAATAGCA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000591558.1 |
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