RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ASXL3 (Homo sapiens)

Ensembl gene IDs: ENSG00000141431

Ensembl transcript IDs: ENST00000269197.12, ENST00000585426.5, ENST00000586327.6, ENST00000586948.1, ENST00000588038.5, ENST00000590189.6, ENST00000590225.5, ENST00000590973.2, ENST00000592288.6, ENST00000592349.5, ENST00000592541.6, ENST00000593195.6, ENST00000593235.1, ENST00000642541.1, ENST00000647014.1, ENST00000681521.1

Found 1580 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ATGCTCGCTGCAGCAGCCACAGCAGCAGCTGCAGCAGCCTCTCGCTaGGCCCGAGCTTGTTGGGCCCGGGCCTTGATATCTGCGAGGGTC +
Preference number: 1 (lower is better)
Translates to: MLAAAATAAAAAASR*ARACWARALISARV
Trigger: GACCCTCGCAGATATCAAGGCCCGGGCCCAACAAGCTCGGGCCCAGCGAGAGGCTGCTGCAGCTGCTGCTGTGGCTGCTGCAGCGAGCAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR GCA 90 bp TCGTCTTTCCACCCTCTCCTGGACTTCCCATGGCTCCAGAGACAATaGTCGCTGCAGCAGCCACAGCAGCAGCTGCAGCAGCCTCTCGCT +
Preference number: 1 (lower is better)
Translates to: SSFHPLLDFPWLQRQ*SLQQPQQQLQQPLA
Trigger: AGCGAGAGGCTGCTGCAGCTGCTGCTGTGGCTGCTGCAGCGAGCATTGTCTCTGGAGCCATGGGAAGTCCAGGAGAGGGTGGAAAGACGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR CCA 90 bp CTGCATGCTCAGGGGGTCATTCCCACTAGGCAGCTACCGCTGTGCTaGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTC +
Preference number: 1 (lower is better)
Translates to: LHAQGVIPTRQLPLC*ASPPYRRCYPRLGF
Trigger: GAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACAGCGGTAGCTGCCTAGTGGGAATGACCCCCTGAGCATGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR GCA 90 bp CACAATTGTTCTCTGGGAACGCAGATGGACAGTGACTCTGGGCTCTaGATGCTCAGGGGGTCATTCCCACTAGGCAGCTACCGCTGTGCT +
Preference number: 1 (lower is better)
Translates to: HNCSLGTQMDSDSGL*MLRGSFPLGSYRCA
Trigger: AGCACAGCGGTAGCTGCCTAGTGGGAATGACCCCCTGAGCATGCAGAGCCCAGAGTCACTGTCCATCTGCGTTCCCAGAGAACAATTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR CCA 90 bp CTGCTCTTTGATGTGTGCCAGAGTTCTCGTCTTTCCACCCTCTCCTaGACTTCCCATGGCTCCAGAGACAATGCTCGCTGCAGCAGCCAC +
Preference number: 1 (lower is better)
Translates to: LLFDVCQSSRLSTLS*TSHGSRDNARCSSH
Trigger: GTGGCTGCTGCAGCGAGCATTGTCTCTGGAGCCATGGGAAGTCCAGGAGAGGGTGGAAAGACGAGAACTCTGGCACACATCAAAGAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR CCA 90 bp CGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTTCTAAAACCTaGGACTTCATTACACCACGGAGGAACTGGGAAACCAGAGGCCAC +
Preference number: 1 (lower is better)
Translates to: RTDDATLGLASASKT*DFITPRRNWETRGH
Trigger: GTGGCCTCTGGTTTCCCAGTTCCTCCGTGGTGTAATGAAGTCCCAGGTTTTAGAAGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR CCA 90 bp ATTCTTCTGATGTGGACTGTGTTTCCCCTCCTGGAGAAGGCAGGCTaGTACAGGCTCCCTCTGGGCTCTCAGAAGAAAAGGACGTTTCAG +
Preference number: 1 (lower is better)
Translates to: ILLMWTVFPLLEKAG*YRLPLGSQKKRTFQ
Trigger: CTGAAACGTCCTTTTCTTCTGAGAGCCCAGAGGGAGCCTGTACCAGCCTGCCTTCTCCAGGAGGGGAAACACAGTCCACATCAGAAGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR GCA 90 bp AGGCTCTGGAGAAGCTGGGCTTTTCATGCTTTTTGGCTGTTGTTCTaGCAAGGCTGTCTGTGCAGAAACTGGAAGGCCAGAAGTCCCACA +
Preference number: 1 (lower is better)
Translates to: RLWRSWAFHAFWLLF*QGCLCRNWKARSPT
Trigger: TGTGGGACTTCTGGCCTTCCAGTTTCTGCACAGACAGCCTTGGCAGAACAACAGCCAAAAAGCATGAAAAGCCCAGCTTCTCCAGAGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR GCA 90 bp CCTGGCTCCTGTGTTCCTCCCGCCACTGACAGATGTGCTAGTGGATaGTCGAGACTCAGGTTTGGAGACTGGTTGGCTCTTGATTATAAA +
Preference number: 1 (lower is better)
Translates to: PGSCVPPATDRCASG*SRLRFGDWLALDYK
Trigger: TTTATAATCAAGAGCCAACCAGTCTCCAAACCTGAGTCTCGAGCATCCACTAGCACATCTGTCAGTGGCGGGAGGAACACAGGAGCCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR TCA 90 bp TGCCAAGGCTGTCTGTGCAGAAACTGGAAGGCCAGAAGTCCCACATaGAGAACTACTTTGAGCTCCAGCGTTGTTTGGTCCAGTAGTGAG +
Preference number: 1 (lower is better)
Translates to: CQGCLCRNWKARSPT*RTTLSSSVVWSSSE
Trigger: CTCACTACTGGACCAAACAACGCTGGAGCTCAAAGTAGTTCTTCATGTGGGACTTCTGGCCTTCCAGTTTCTGCACAGACAGCCTTGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR TCA 90 bp GGCAACCGGGTCTCTTTAGAGGTCTGGAAGAGATGGGCTCGAGCTTaGTGCTTTGCAAAGAGCTTAGCCTTTGTCTGCTCTTTGATGTGT +
Preference number: 1 (lower is better)
Translates to: GNRVSLEVWKRWARA*CFAKSLAFVCSLMC
Trigger: ACACATCAAAGAGCAGACAAAGGCTAAGCTCTTTGCAAAGCATCAAGCTCGAGCCCATCTCTTCCAGACCTCTAAAGAGACCCGGTTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR GCA 90 bp GATAAGTCAGTGGCAGTTTCTGGAAGTTTACTTGGGTTAAGAGACTaGTGTAGTACAGTGGTGGTCTCCCGGAGGTGGGCAGACTTGTTG +
Preference number: 1 (lower is better)
Translates to: DKSVAVSGSLLGLRD*CSTVVVSRRWADLL
Trigger: CAACAAGTCTGCCCACCTCCGGGAGACCACCACTGTACTACAGCAGTCTCTTAACCCAAGTAAACTTCCAGAAACTGCCACTGACTTATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR CCA 90 bp TACCATAGGGCAAAGAGTAGCACAGAAACCAGGCTCTGGAGAAGCTaGGCTTTTCATGCTTTTTGGCTGTTGTTCTGCCAAGGCTGTCTG +
Preference number: 1 (lower is better)
Translates to: YHRAKSSTETRLWRS*AFHAFWLLFCQGCL
Trigger: CAGACAGCCTTGGCAGAACAACAGCCAAAAAGCATGAAAAGCCCAGCTTCTCCAGAGCCTGGTTTCTGTGCTACTCTTTGCCCTATGGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR TCA 90 bp TGTGCAGAAACTGGAAGGCCAGAAGTCCCACATGAAGAACTACTTTaGGCTCCAGCGTTGTTTGGTCCAGTAGTGAGCTTCACAGATTCC +
Preference number: 1 (lower is better)
Translates to: CAETGRPEVPHEELL*APALFGPVVSFTDS
Trigger: GGAATCTGTGAAGCTCACTACTGGACCAAACAACGCTGGAGCTCAAAGTAGTTCTTCATGTGGGACTTCTGGCCTTCCAGTTTCTGCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR GCA 90 bp TACAGGCTCCCTCTGGGCTCTCAGAAGAAAAGGACGTTTCAGAGATaGAGGCATTTTCTGAAAGCTGTTCTTCAGGGTCACTCTGTAGCT +
Preference number: 1 (lower is better)
Translates to: YRLPLGSQKKRTFQR*RHFLKAVLQGHSVA
Trigger: AGCTACAGAGTGACCCTGAAGAACAGCTTTCAGAAAATGCCTGCATCTCTGAAACGTCCTTTTCTTCTGAGAGCCCAGAGGGAGCCTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR CCA 90 bp CCCAACACAACCTGGCAGGCAGTGAAGAGAAAACTAAGGATCCACTaGAACTTATGCTGCTTTCCTCGGGTAAGGCTGGTTAAGTGCATT +
Preference number: 1 (lower is better)
Translates to: PNTTWQAVKRKLRIH*NLCCFPRVRLVKCI
Trigger: AATGCACTTAACCAGCCTTACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGCCTGCCAGGTTGTGTTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR CCA 90 bp CTTGGGTTAAGAGACTGCTGTAGTACAGTGGTGGTCTCCCGGAGGTaGGCAGACTTGTTGCTAGGAGATCTACAGTTTGGATTGACAATA +
Preference number: 1 (lower is better)
Translates to: LGLRDCCSTVVVSRR*ADLLLGDLQFGLTI
Trigger: TATTGTCAATCCAAACTGTAGATCTCCTAGCAACAAGTCTGCCCACCTCCGGGAGACCACCACTGTACTACAGCAGTCTCTTAACCCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR CCA 90 bp TGCTGCTGCCTCAAAGCCTGTTTAAGAGCCTTTTTGGTGTGCTGCTaGAAGGAAGACACTAACTTGCTTTGCACTGCTGTGTTAGTAAGG +
Preference number: 1 (lower is better)
Translates to: CCCLKACLRAFLVCC*KEDTNLLCTAVLVR
Trigger: CCTTACTAACACAGCAGTGCAAAGCAAGTTAGTGTCTTCCTTCCAGCAGCACACCAAAAAGGCTCTTAAACAGGCTTTGAGGCAGCAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
3UTR GCA 90 bp AGAGCCTTTTTGGTGTGCTGCTGGAAGGAAGACACTAACTTGCTTTaGACTGCTGTGTTAGTAAGGCTTGAATCTCGAGTGGAAGATGCT +
Preference number: 1 (lower is better)
Translates to: RAFLVCCWKEDTNLL*TAVLVRLESRVEDA
Trigger: AGCATCTTCCACTCGAGATTCAAGCCTTACTAACACAGCAGTGCAAAGCAAGTTAGTGTCTTCCTTCCAGCAGCACACCAAAAAGGCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
3UTR GCA 90 bp TTCTGCTGCTGCCTCAAAGCCTGTTTAAGAGCCTTTTTGGTGTGCTaGTGGAAGGAAGACACTAACTTGCTTTGCACTGCTGTGTTAGTA +
Preference number: 1 (lower is better)
Translates to: FCCCLKACLRAFLVC*WKEDTNLLCTAVLV
Trigger: TACTAACACAGCAGTGCAAAGCAAGTTAGTGTCTTCCTTCCAGCAGCACACCAAAAAGGCTCTTAAACAGGCTTTGAGGCAGCAGCAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
3UTR CCA 90 bp GCCACACATGAAGCTCTAAAATCCTCTGGGCTTATGGCTATTGGCTaGCCAATTGCTCTCATATTATCAGGTGTCAAAGGCCTAGAACCA +
Preference number: 1 (lower is better)
Translates to: ATHEALKSSGLMAIG*PIALILSGVKGLEP
Trigger: TGGTTCTAGGCCTTTGACACCTGATAATATGAGAGCAATTGGCCAGCCAATAGCCATAAGCCCAGAGGATTTTAGAGCTTCATGTGTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR CCA 90 bp TGGAATTTCTACCATAGGGCAAAGAGTAGCACAGAAACCAGGCTCTaGAGAAGCTGGGCTTTTCATGCTTTTTGGCTGTTGTTCTGCCAA +
Preference number: 1 (lower is better)
Translates to: WNFYHRAKSSTETRL*RSWAFHAFWLLFCQ
Trigger: TTGGCAGAACAACAGCCAAAAAGCATGAAAAGCCCAGCTTCTCCAGAGCCTGGTTTCTGTGCTACTCTTTGCCCTATGGTAGAAATTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR CCA 90 bp ACTGACAGATGTGCTAGTGGATGCTCGAGACTCAGGTTTGGAGACTaGTTGGCTCTTGATTATAAAAGGTGGCCCAATTTTGGAAAGCTG +
Preference number: 1 (lower is better)
Translates to: TDRCASGCSRLRFGD*LALDYKRWPNFGKL
Trigger: CAGCTTTCCAAAATTGGGCCACCTTTTATAATCAAGAGCCAACCAGTCTCCAAACCTGAGTCTCGAGCATCCACTAGCACATCTGTCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR CCA 90 bp GGTCTCCCGGAGGTGGGCAGACTTGTTGCTAGGAGATCTACAGTTTaGATTGACAATAATGACACCAGTCGAACCTTCCATTTTTGTTTC +
Preference number: 1 (lower is better)
Translates to: GLPEVGRLVARRSTV*IDNNDTSRTFHFCF
Trigger: GAAACAAAAATGGAAGGTTCGACTGGTGTCATTATTGTCAATCCAAACTGTAGATCTCCTAGCAACAAGTCTGCCCACCTCCGGGAGACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR TCA 90 bp AGACATGCCAGTGAGCCATTCAGTTGGGATGCATCCTCCCCTTTATaGGAAATGCAAGAAAATAATGCCATAGAGGAAAGGTACCTGCTC +
Preference number: 1 (lower is better)
Translates to: RHASEPFSWDASSPL*EMQENNAIEERYLL
Trigger: GAGCAGGTACCTTTCCTCTATGGCATTATTTTCTTGCATTTCTCATAAAGGGGAGGATGCATCCCAACTGAATGGCTCACTGGCATGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR GCA 90 bp GGTTTGCTGACTCAGGGTCTTATTGTGCAAATCTTCAGACGGAAATaGTTCAGGAGCAATGGAAGAAGAACTCATTATGATGGGTTCGGG +
Preference number: 1 (lower is better)
Translates to: GLLTQGLIVQIFRRK*FRSNGRRTHYDGFG
Trigger: CCCGAACCCATCATAATGAGTTCTTCTTCCATTGCTCCTGAAGCATTTCCGTCTGAAGATTTGCACAATAAGACCCTGAGTCAGCAAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR CCA 90 bp ACAGTATCTGACACTGGTATAGCAGTGAATGAATTTGGAAGGAGTTaGCATGCAAGTGTCTATATTATAGGGGTGCCCCGCTGTGAGACT +
Preference number: 1 (lower is better)
Translates to: TVSDTGIAVNEFGRS*HASVYIIGVPRCET
Trigger: AGTCTCACAGCGGGGCACCCCTATAATATAGACACTTGCATGCCAACTCCTTCCAAATTCATTCACTGCTATACCAGTGTCAGATACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR CCA 90 bp TTTCATTTCTTATCCCATCAGGTGACTTGGAGGGCTCTGATGACTTaGAAGTATGTGAGGTTTCTAACCGACTCTGTGTACTCCCTTGCT +
Preference number: 1 (lower is better)
Translates to: FHFLSHQVTWRALMT*KYVRFLTDSVYSLA
Trigger: AGCAAGGGAGTACACAGAGTCGGTTAGAAACCTCACATACTTCCAAGTCATCAGAGCCCTCCAAGTCACCTGATGGGATAAGAAATGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR TCA 90 bp CAAGCATTCGGTTCAGCATCACCTCATGACCAACACGAAAGCAGCTaGGGCTCTAATATAATCATCATGGAAAGTTGTCCCAAATCCTTC +
Preference number: 1 (lower is better)
Translates to: QAFGSASPHDQHESS*GSNIIIMESCPKSF
Trigger: GAAGGATTTGGGACAACTTTCCATGATGATTATATTAGAGCCTCAGCTGCTTTCGTGTTGGTCATGAGGTGATGCTGAACCGAATGCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593195.6
3UTR TCA 90 bp AGACTCATCTTTCTGCGGGGAGAGTGGCTCTTCAGATACAGAAGGTaGCTTTCTTTGCTGATGTGCCATTCTCTCATTTATGGAAGAGTT +
Preference number: 1 (lower is better)
Translates to: RLIFLRGEWLFRYRR*LSLLMCHSLIYGRV
Trigger: AACTCTTCCATAAATGAGAGAATGGCACATCAGCAAAGAAAGTCACCTTCTGTATCTGAAGAGCCACTCTCCCCGCAGAAAGATGAGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR TCA 90 bp ATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCACATACTaGGTGCAAAGGTTCTGTAGACTGGAGTTTCTTCCGACACCATGT +
Preference number: 1 (lower is better)
Translates to: IMSSVSHQPQLYLTY*VQRFCRLEFLPTPC
Trigger: ACATGGTGTCGGAAGAAACTCCAGTCTACAGAACCTTTGCACTCAGTATGTGAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR TCA 90 bp TTCTGTAGACTGGAGTTTCTTCCGACACCATGTCAGTTACTGATGTaGTGGTTTTCAATTTGCTGGTGTAGACAGTATCTGACACTGGTA +
Preference number: 1 (lower is better)
Translates to: FCRLEFLPTPCQLLM*WFSICWCRQYLTLV
Trigger: TACCAGTGTCAGATACTGTCTACACCAGCAAATTGAAAACCATCACATCAGTAACTGACATGGTGTCGGAAGAAACTCCAGTCTACAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR TCA 90 bp CTTGTGCTGCATATGCAAAGAATTCATTATTTAGAGCTGAAGTACTaGGGCGTAAAATTCCATCACTTCCCATCTGAAGGCGAATCCGAC +
Preference number: 1 (lower is better)
Translates to: LVLHMQRIHYLELKY*GVKFHHFPSEGESD
Trigger: GTCGGATTCGCCTTCAGATGGGAAGTGATGGAATTTTACGCCTCAGTACTTCAGCTCTAAATAATGAATTCTTTGCATATGCAGCACAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592541.6
3UTR CCA 90 bp ATATCTCTGAATCTCTACTTTCATTTCTTATCCCATCAGGTGACTTaGAGGGCTCTGATGACTTGGAAGTATGTGAGGTTTCTAACCGAC +
Preference number: 1 (lower is better)
Translates to: ISLNLYFHFLSHQVT*RALMTWKYVRFLTD
Trigger: GTCGGTTAGAAACCTCACATACTTCCAAGTCATCAGAGCCCTCCAAGTCACCTGATGGGATAAGAAATGAAAGTAGAGATTCAGAGATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR TCA 90 bp CTTGTGCTGCATATGCAAAGAATTCATTATTTAGAGCTGAAGTACTaGGGCGTAAAATTCCATCACTTCCCATCTGCCTATCCACTTCTG +
Preference number: 1 (lower is better)
Translates to: LVLHMQRIHYLELKY*GVKFHHFPSAYPLL
Trigger: CAGAAGTGGATAGGCAGATGGGAAGTGATGGAATTTTACGCCTCAGTACTTCAGCTCTAAATAATGAATTCTTTGCATATGCAGCACAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593195.6
3UTR TCA 90 bp CAGGATTCCAAGTTATCTTCAGGAGGTGCTATTTGGGGTTCTTCATaGGAATTGGTTAGACTTTCAGCCTCCTCAGAAAATTCAGGTATT +
Preference number: 1 (lower is better)
Translates to: QDSKLSSGGAIWGSS*ELVRLSASSENSGI
Trigger: AATACCTGAATTTTCTGAGGAGGCTGAAAGTCTAACCAATTCTCATGAAGAACCCCAAATAGCACCTCCTGAAGATAACTTGGAATCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR GCA 90 bp GACTTGGAAGTATGTGAGGTTTCTAACCGACTCTGTGTACTCCCTTaGTTATGTGTTTTATTTCTAGAGCCTTCTGAAAATGGAGCCTTA +
Preference number: 1 (lower is better)
Translates to: DLEVCEVSNRLCVLP*LCVLFLEPSENGAL
Trigger: TAAGGCTCCATTTTCAGAAGGCTCTAGAAATAAAACACATAAGCAAGGGAGTACACAGAGTCGGTTAGAAACCTCACATACTTCCAAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR TCA 90 bp TGTGTACAAAATCCAAGGAAGATCCAGATATTCTGCCATAGTCTCTaGGAAAGTACAACAGGAGGAAAGATAATACTCAGGACAGTGGAT +
Preference number: 1 (lower is better)
Translates to: CVQNPRKIQIFCHSL*ESTTGGKIILRTVD
Trigger: ATCCACTGTCCTGAGTATTATCTTTCCTCCTGTTGTACTTTCTCAGAGACTATGGCAGAATATCTGGATCTTCCTTGGATTTTGTACACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR CCA 90 bp CCAAGTTATCTTCAGGAGGTGCTATTTGGGGTTCTTCATGAGAATTaGTTAGACTTTCAGCCTCCTCAGAAAATTCAGGTATTGTCTTAT +
Preference number: 1 (lower is better)
Translates to: PSYLQEVLFGVLHEN*LDFQPPQKIQVLSY
Trigger: ATAAGACAATACCTGAATTTTCTGAGGAGGCTGAAAGTCTAACCAATTCTCATGAAGAACCCCAAATAGCACCTCCTGAAGATAACTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR TCA 90 bp TTGGTTAGACTTTCAGCCTCCTCAGAAAATTCAGGTATTGTCTTATaGTTTTCATCCTGGCATTCACAGATACTAGTCTCTACCTCTTCT +
Preference number: 1 (lower is better)
Translates to: LVRLSASSENSGIVL*FSSWHSQILVSTSS
Trigger: AGAAGAGGTAGAGACTAGTATCTGTGAATGCCAGGATGAAAATCATAAGACAATACCTGAATTTTCTGAGGAGGCTGAAAGTCTAACCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR TCA 90 bp AATTTCCTCCTGAATTACAGATTCTTCAGGGATCAAGATATCCTCTaGCTCCAATTCTGCCATTATATCTTTAGGTGGAATTTCTACCAT +
Preference number: 1 (lower is better)
Translates to: NFLLNYRFFRDQDIL*LQFCHYIFRWNFYH
Trigger: ATGGTAGAAATTCCACCTAAAGATATAATGGCAGAATTGGAGTCAGAGGATATCTTGATCCCTGAAGAATCTGTAATTCAGGAGGAAATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR GCA 90 bp CACTGTGGTAAAGCTAGGTTCAGAGAAGTCAACTGTAAAATTCCTTaGTGTAATGGCTCATCTATAGAAAAATGCATAACCACTTTAACT +
Preference number: 1 (lower is better)
Translates to: HCGKARFREVNCKIP*CNGSSIEKCITTLT
Trigger: AGTTAAAGTGGTTATGCATTTTTCTATAGATGAGCCATTACAGCAAGGAATTTTACAGTTGACTTCTCTGAACCTAGCTTTACCACAGTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR GCA 90 bp TATATGGAATGTAGCTCAAATACTCAACACGCAGACTTTACTGGATaGACACTGAAGATAACTGTTAAGATGCAGTATCCCTTTTTCAAA +
Preference number: 1 (lower is better)
Translates to: YMECSSNTQHADFTG*TLKITVKMQYPFFK
Trigger: TTTGAAAAAGGGATACTGCATCTTAACAGTTATCTTCAGTGTGCATCCAGTAAAGTCTGCGTGTTGAGTATTTGAGCTACATTCCATATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR GCA 90 bp TGTAAAGGAAATGGGGCTACAGCAACATGTATTCTTACTCTCGACTaGATTATAAAGCACCATATGTACCAGCTTGTTTTTGTGTATTTT +
Preference number: 1 (lower is better)
Translates to: CKGNGATATCILTLD*IIKHHMYQLVFVYF
Trigger: AAAATACACAAAAACAAGCTGGTACATATGGTGCTTTATAATGCAGTCGAGAGTAAGAATACATGTTGCTGTAGCCCCATTTCCTTTACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR CAA 90 bp GCTGCAGCAGCCTCTCGCTGGGCCCGAGCTTGTTGGGCCCGGGCCTaGATATCTGCGAGGGTCCTGGCTCCTGTGTTCCTCCCGCCACTG +
Preference number: 2 (lower is better)
Translates to: AAAASRWARACWARA*ISARVLAPVFLPPL
Trigger: CAGTGGCGGGAGGAACACAGGAGCCAGGACCCTCGCAGATATCAAGGCCCGGGCCCAACAAGCTCGGGCCCAGCGAGAGGCTGCTGCAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CCA 90 bp CTCCTGGACTTCCCATGGCTCCAGAGACAATGCTCGCTGCAGCAGCCACAGCAGCTGGAGAAGGCAGGCTaGTACAGGCTCCCTCTGGGC +
Preference number: 2 (lower is better)
Translates to: LLDFPWLQRQCSLQQPQQLEKAG*YRLPLG
Trigger: GCCCAGAGGGAGCCTGTACCAGCCTGCCTTCTCCAG...CTGCTGTGGCTGCTGCAGCGAGCATTGTCTCTGGAGCCATGGGAAGTCCAGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR TCA 90 bp CAATGCTCGCTGCAGCAGCCACAGCAGCAGCTGCAGCAGCCTCTCGCTGGGCCCTTCAGCATCACCTCATaGCCAACACGAAAGCAGCTG +
Preference number: 2 (lower is better)
Translates to: QCSLQQPQQQLQQPLAGPFSITS*PTRKQL
Trigger: CAGCTGCTTTCGTGTTGGTCATGAGGTGATGCTGAA...GGGCCCAGCGAGAGGCTGCTGCAGCTGCTGCTGTGGCTGCTGCAGCGAGCATTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593195.6
3UTR-3UTR CCA 90 bp CAATGCTCGCTGCAGCAGCCACAGCAGCAGCTGCAGCAGCCTCTCGCTGGGCCCCCGCAACTGCATTTCTaGGGTAAACTCTCCTTCTGC +
Preference number: 2 (lower is better)
Translates to: QCSLQQPQQQLQQPLAGPPQLHF*GKLSFC
Trigger: GCAGAAGGAGAGTTTACCCCAGAAATGCAGTTGCGG...GGGCCCAGCGAGAGGCTGCTGCAGCTGCTGCTGTGGCTGCTGCAGCGAGCATTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CCA 90 bp CAATGCTCGCTGCAGCAGCCACAGCAGCAGCTGCAGCAGCCTCTCGCTGGGCCCACAGAAACCAGGCTCTaGAGAAGCTGGGCTTTTCAT +
Preference number: 2 (lower is better)
Translates to: QCSLQQPQQQLQQPLAGPTETRL*RSWAFH
Trigger: ATGAAAAGCCCAGCTTCTCCAGAGCCTGGTTTCTGT...GGGCCCAGCGAGAGGCTGCTGCAGCTGCTGCTGTGGCTGCTGCAGCGAGCATTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR TCA 90 bp CAATGCTCGCTGCAGCAGCCACAGCAGCAGCTGCAGCAGCCTCTCGCTGGGCCCCATGAAGAACTACTTTaGGCTCCAGCGTTGTTTGGT +
Preference number: 2 (lower is better)
Translates to: QCSLQQPQQQLQQPLAGPHEELL*APALFG
Trigger: ACCAAACAACGCTGGAGCTCAAAGTAGTTCTTCATG...GGGCCCAGCGAGAGGCTGCTGCAGCTGCTGCTGTGGCTGCTGCAGCGAGCATTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR GCA 90 bp CAATGCTCGCTGCAGCAGCCACAGCAGCAGCTGCAGCAGCCTCTCGCTGGGCCCTGCCTTATCCGCAACTaGATTTCTGGGGTAAACTCT +
Preference number: 2 (lower is better)
Translates to: QCSLQQPQQQLQQPLAGPCLIRN*ISGVNS
Trigger: AGAGTTTACCCCAGAAATGCAGTTGCGGATAAGGCA...GGGCCCAGCGAGAGGCTGCTGCAGCTGCTGCTGTGGCTGCTGCAGCGAGCATTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CCA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTACACCACGGAGGAACTaGGAAACCAGAGGCCACGGT +
Preference number: 2 (lower is better)
Translates to: CAGPHHRTDDATLGLASATPRRN*ETRGHG
Trigger: ACCGTGGCCTCTGGTTTCCCAGTTCCTCCGTGGTGT...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR GCA 90 bp CAATGCTCGCTGCAGCAGCCACAGCAGCAGCTGCAGCAGCCTCTCGCTGGGCCCCTGTTTCCACCCTTGTaGTGCATATGCAAAGAATTC +
Preference number: 2 (lower is better)
Translates to: QCSLQQPQQQLQQPLAGPLFPPL*CICKEF
Trigger: GAATTCTTTGCATATGCAGCACAAGGGTGGAAACAG...GGGCCCAGCGAGAGGCTGCTGCAGCTGCTGCTGTGGCTGCTGCAGCGAGCATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CCA 90 bp CAATGCTCGCTGCAGCAGCCACAGCAGCAGCTGCAGCAGCCTCTCGCTGGGCCCTTATTTTGGGGGTACTaGTCTCTACTGCAGTTTCTG +
Preference number: 2 (lower is better)
Translates to: QCSLQQPQQQLQQPLAGPLFWGY*SLLQFL
Trigger: CAGAAACTGCAGTAGAGACCAGTACCCCCAAAATAA...GGGCCCAGCGAGAGGCTGCTGCAGCTGCTGCTGTGGCTGCTGCAGCGAGCATTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR CAA 90 bp CGCTGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTaGGCTTCAGCTTCTAAAACCTGGGACTTCATTACACCACGGAGG +
Preference number: 2 (lower is better)
Translates to: RCAGPHHRTDDATLG*ASASKTWDFITPRR
Trigger: CCTCCGTGGTGTAATGAAGTCCCAGGTTTTAGAAGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACAGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR TCA 90 bp ACAATGCTCGCTGCAGCAGCCACAGCAGCAGCTGCAGCAGCCTCTCGCTGGGCCATTCGAGTGTTAGTGTaGAGCATTGCATTCAGACAG +
Preference number: 2 (lower is better)
Translates to: TMLAAAATAAAAAASRWAIRVLV*SIAFRQ
Trigger: CTGTCTGAATGCAATGCTTCACACTAACACTCGAAT...GGCCCAGCGAGAGGCTGCTGCAGCTGCTGCTGTGGCTGCTGCAGCGAGCATTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR TCA 90 bp ACAATGCTCGCTGCAGCAGCCACAGCAGCAGCTGCAGCAGCCTCTCGCTGGGCCATTTCTAGAGCCTTCTaGAAATGGAGCCTTATCCAC +
Preference number: 2 (lower is better)
Translates to: TMLAAAATAAAAAASRWAISRAF*KWSLIH
Trigger: GTGGATAAGGCTCCATTTTCAGAAGGCTCTAGAAAT...GGCCCAGCGAGAGGCTGCTGCAGCTGCTGCTGTGGCTGCTGCAGCGAGCATTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CCA 90 bp TCCTGGACTTCCCATGGCTCCAGAGACAATGCTCGCTGCAGCAGCCACAGCAGCTGTCTGTGCAGAAACTaGAAGGCCAGAAGTCCCACA +
Preference number: 2 (lower is better)
Translates to: SWTSHGSRDNARCSSHSSCLCRN*KARSPT
Trigger: TGTGGGACTTCTGGCCTTCCAGTTTCTGCACAGACA...GCTGCTGTGGCTGCTGCAGCGAGCATTGTCTCTGGAGCCATGGGAAGTCCAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CCA 90 bp CCTTCCTTTGAGCTGAGCGGAGGAGGCAACCGGGTCTCTTTAGAGGTCTGGAAGCTGTGTTTCCCCTCCTaGAGAAGGCAGGCTGGTACA +
Preference number: 2 (lower is better)
Translates to: PSFELSGGGNRVSLEVWKLCFPS*RRQAGT
Trigger: TGTACCAGCCTGCCTTCTCCAGGAGGGGAAACACAG...CTTCCAGACCTCTAAAGAGACCCGGTTGCCTCCTCCGCTCAGCTCAAAGGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR TCA 90 bp AGCGGAGGAGGCAACCGGGTCTCTTTAGAGGTCTGGAAGAGATGGGCTCGAGCTCACAGATTCCTCTCTTaGCATGCCCAGCTTTTCTCC +
Preference number: 2 (lower is better)
Translates to: SGGGNRVSLEVWKRWARAHRFLS*HAQLFS
Trigger: GGAGAAAAGCTGGGCATGTCAAGAGAGGAATCTGTG...AGCTCGAGCCCATCTCTTCCAGACCTCTAAAGAGACCCGGTTGCCTCCTCCGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR GCA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTCACTGGAACTTATGCTaGTTTCCTCGGGTAAGGCTG +
Preference number: 2 (lower is better)
Translates to: CAGPHHRTDDATLGLASAHWNLC*FPRVRL
Trigger: CAGCCTTACCCGAGGAAAGCAGCATAAGTTCCAGTG...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR TCA 90 bp CCTTCCTTTGAGCTGAGCGGAGGAGGCAACCGGGTCTCTTTAGAGGTCTGGAAGCATTTCCGGAAGGAATaGACGGAACCACTCCAATGC +
Preference number: 2 (lower is better)
Translates to: PSFELSGGGNRVSLEVWKHFRKE*TEPLQC
Trigger: GCATTGGAGTGGTTCCGTTCATTCCTTCCGGAAATG...CTTCCAGACCTCTAAAGAGACCCGGTTGCCTCCTCCGCTCAGCTCAAAGGAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR GCA 90 bp AGGTTTGGCAGTGGCGGAAGACTCATCTTTCTGCGGGGAGAGTGGCTCTTCAGAGGTAAACTCTCCTTCTaGCAGTCGCTGTTTCCACCC +
Preference number: 2 (lower is better)
Translates to: RFGSGGRLIFLRGEWLFRGKLSF*QSLFPP
Trigger: GGGTGGAAACAGCGACTGGCAGAAGGAGAGTTTACC...TCTGAAGAGCCACTCTCCCCGCAGAAAGATGAGTCTTCCGCCACTGCCAAACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR GCA 90 bp AGGGGGAACCCTTGGTTCCTCTCTGGGAGGCTGTTCTTTCTCAGGTGGGCTGCTTTTTGGCTGTTGTTCTaGCAAGGCTGTCTGTGCAGA +
Preference number: 2 (lower is better)
Translates to: RGNPWFLSGRLFFLRWAAFWLLF*QGCLCR
Trigger: TCTGCACAGACAGCCTTGGCAGAACAACAGCCAAAA...AGCAGCCCACCTGAGAAAGAACAGCCTCCCAGAGAGGAACCAAGGGTTCCCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR TCA 90 bp GTTCCTCCCGCCACTGACAGATGTGCTAGTGGATGCTCGAGACTCAGGTTTGGAGCCAGAAGTCCCACATaGAGAACTACTTTGAGCTCC +
Preference number: 2 (lower is better)
Translates to: VPPATDRCASGCSRLRFGARSPT*RTTLSS
Trigger: GGAGCTCAAAGTAGTTCTTCATGTGGGACTTCTGGC...TCCAAACCTGAGTCTCGAGCATCCACTAGCACATCTGTCAGTGGCGGGAGGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR GCA 90 bp GGCTGGTACAGGCTCCCTCTGGGCTCTCAGAAGAAAAGGACGTTTCAGAGATGCAGACTAAATCCAACGTaGCATCTGCTGGGCATGACG +
Preference number: 2 (lower is better)
Translates to: GWYRLPLGSQKKRTFQRCRLNPT*HLLGMT
Trigger: CGTCATGCCCAGCAGATGGCACGTTGGATTTAGTCT...GCATCTCTGAAACGTCCTTTTCTTCTGAGAGCCCAGAGGGAGCCTGTACCAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR GCA 90 bp CTCCTGGACTTCCCATGGCTCCAGAGACAATGCTCGCTGCAGCAGCCACAGCAGGACACTAACTTGCTTTaGACTGCTGTGTTAGTAAGG +
Preference number: 2 (lower is better)
Translates to: LLDFPWLQRQCSLQQPQQDTNLL*TAVLVR
Trigger: CCTTACTAACACAGCAGTGCAAAGCAAGTTAGTGTC...CTGCTGTGGCTGCTGCAGCGAGCATTGTCTCTGGAGCCATGGGAAGTCCAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR GCA 90 bp CCTTCCTTTGAGCTGAGCGGAGGAGGCAACCGGGTCTCTTTAGAGGTCTGGAAGAGATGTGCTAGTGGATaGTCGAGACTCAGGTTTGGA +
Preference number: 2 (lower is better)
Translates to: PSFELSGGGNRVSLEVWKRCASG*SRLRFG
Trigger: TCCAAACCTGAGTCTCGAGCATCCACTAGCACATCT...CTTCCAGACCTCTAAAGAGACCCGGTTGCCTCCTCCGCTCAGCTCAAAGGAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CCA 90 bp GTTCTCGTCTTTCCACCCTCTCCTGGACTTCCCATGGCTCCAGAGACAATGCTCCCGCAACTGCATTTCTaGGGTAAACTCTCCTTCTGC +
Preference number: 2 (lower is better)
Translates to: VLVFPPSPGLPMAPETMLPQLHF*GKLSFC
Trigger: GCAGAAGGAGAGTTTACCCCAGAAATGCAGTTGCGG...GAGCATTGTCTCTGGAGCCATGGGAAGTCCAGGAGAGGGTGGAAAGACGAGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CCA 90 bp GCAGTTTCTGGAAGTTTACTTGGGTTAAGAGACTGCTGTAGTACAGTGGTGGTCCTGGAGAAGGCAGGCTaGTACAGGCTCCCTCTGGGC +
Preference number: 2 (lower is better)
Translates to: AVSGSLLGLRDCCSTVVVLEKAG*YRLPLG
Trigger: GCCCAGAGGGAGCCTGTACCAGCCTGCCTTCTCCAG...GACCACCACTGTACTACAGCAGTCTCTTAACCCAAGTAAACTTCCAGAAACTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CCA 90 bp CTCCTGGACTTCCCATGGCTCCAGAGACAATGCTCGCTGCAGCAGCCACAGCAGAGGGCTCTGATGACTTaGAAGTATGTGAGGTTTCTA +
Preference number: 2 (lower is better)
Translates to: LLDFPWLQRQCSLQQPQQRALMT*KYVRFL
Trigger: TAGAAACCTCACATACTTCCAAGTCATCAGAGCCCT...CTGCTGTGGCTGCTGCAGCGAGCATTGTCTCTGGAGCCATGGGAAGTCCAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR TCA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTTGCACTATCAACAACTaGTTCTCCAAGCCTGTTATG +
Preference number: 2 (lower is better)
Translates to: CAGPHHRTDDATLGLASACTINN*FSKPVM
Trigger: CATAACAGGCTTGGAGAATCAGTTGTTGATAGTGCA...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR TCA 90 bp ACAGTGGTGGTCTCCCGGAGGTGGGCAGACTTGTTGCTAGGAGATCTACAGTTTGCCAGAAGTCCCACATaGAGAACTACTTTGAGCTCC +
Preference number: 2 (lower is better)
Translates to: TVVVSRRWADLLLGDLQFARSPT*RTTLSS
Trigger: GGAGCTCAAAGTAGTTCTTCATGTGGGACTTCTGGC...AAACTGTAGATCTCCTAGCAACAAGTCTGCCCACCTCCGGGAGACCACCACTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR TCA 90 bp TGCTCTTTGATGTGTGCCAGAGTTCTCGTCTTTCCACCCTCTCCTGGACTTCCCAAGTGGTCTCAGAGGTaGGAAGCATGGAAGACACTG +
Preference number: 2 (lower is better)
Translates to: CSLMCARVLVFPPSPGLPKWSQR*EAWKTL
Trigger: CAGTGTCTTCCATGCTTCTCACCTCTGAGACCACTT...GGGAAGTCCAGGAGAGGGTGGAAAGACGAGAACTCTGGCACACATCAAAGAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR TCA 90 bp CCTTCCTTTGAGCTGAGCGGAGGAGGCAACCGGGTCTCTTTAGAGGTCTGGAAGATGTTCCGGGTTGACTaGTCATCTTCTATCCTAGCT +
Preference number: 2 (lower is better)
Translates to: PSFELSGGGNRVSLEVWKMFRVD*SSSILA
Trigger: AGCTAGGATAGAAGATGATCAGTCAACCCGGAACAT...CTTCCAGACCTCTAAAGAGACCCGGTTGCCTCCTCCGCTCAGCTCAAAGGAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR GCA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTTACACCTCAGGCATATaGATATCTTATAGGAGGAGG +
Preference number: 2 (lower is better)
Translates to: CAGPHHRTDDATLGLASAYTSGI*ISYRRR
Trigger: CCTCCTCCTATAAGATATGCATATGCCTGAGGTGTA...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR GCA 90 bp CCTTCCTTTGAGCTGAGCGGAGGAGGCAACCGGGTCTCTTTAGAGGTCTGGAAGAGCTTAGCCTTTGTCTaGTCTTTGATGTGTGCCAGA +
Preference number: 2 (lower is better)
Translates to: PSFELSGGGNRVSLEVWKSLAFV*SLMCAR
Trigger: TCTGGCACACATCAAAGAGCAGACAAAGGCTAAGCT...CTTCCAGACCTCTAAAGAGACCCGGTTGCCTCCTCCGCTCAGCTCAAAGGAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CCA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTTATGCTAATCGGACCTaGATGATAGAATCCATGCAC +
Preference number: 2 (lower is better)
Translates to: CAGPHHRTDDATLGLASAYANRT*MIESMH
Trigger: GTGCATGGATTCTATCATCCAGGTCCGATTAGCATA...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR CCA 90 bp GTTCTCGTCTTTCCACCCTCTCCTGGACTTCCCATGGCTCCAGAGACAATGCTCCCATTTTCTTCTCCATaGGCATTTGCCTCGGCCATA +
Preference number: 2 (lower is better)
Translates to: VLVFPPSPGLPMAPETMLPFSSP*AFASAI
Trigger: TATGGCCGAGGCAAATGCCCATGGAGAAGAAAATGG...GAGCATTGTCTCTGGAGCCATGGGAAGTCCAGGAGAGGGTGGAAAGACGAGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CCA 90 bp GGCTGGTACAGGCTCCCTCTGGGCTCTCAGAAGAAAAGGACGTTTCAGAGATGCCCATTTTCTTCTCCATaGGCATTTGCCTCGGCCATA +
Preference number: 2 (lower is better)
Translates to: GWYRLPLGSQKKRTFQRCPFSSP*AFASAI
Trigger: TATGGCCGAGGCAAATGCCCATGGAGAAGAAAATGG...GCATCTCTGAAACGTCCTTTTCTTCTGAGAGCCCAGAGGGAGCCTGTACCAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CCA 90 bp GGCTGGTACAGGCTCCCTCTGGGCTCTCAGAAGAAAAGGACGTTTCAGAGATGCAGGCTCTGGAGAAGCTaGGCTTTTCATGCTTTTTGG +
Preference number: 2 (lower is better)
Translates to: GWYRLPLGSQKKRTFQRCRLWRS*AFHAFW
Trigger: CCAAAAAGCATGAAAAGCCCAGCTTCTCCAGAGCCT...GCATCTCTGAAACGTCCTTTTCTTCTGAGAGCCCAGAGGGAGCCTGTACCAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CCA 90 bp GCAGTTTCTGGAAGTTTACTTGGGTTAAGAGACTGCTGTAGTACAGTGGTGGTCTATCTGCGAGGGTCCTaGCTCCTGTGTTCCTCCCGC +
Preference number: 2 (lower is better)
Translates to: AVSGSLLGLRDCCSTVVVYLRGS*LLCSSR
Trigger: GCGGGAGGAACACAGGAGCCAGGACCCTCGCAGATA...GACCACCACTGTACTACAGCAGTCTCTTAACCCAAGTAAACTTCCAGAAACTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR TCA 90 bp GCCAGAGTTCTCGTCTTTCCACCCTCTCCTGGACTTCCCATGGCTCCAGAGACATCTGCAATTTCCTCCTaGATTACAGATTCTTCAGGG +
Preference number: 2 (lower is better)
Translates to: ARVLVFPPSPGLPMAPETSAISS*ITDSSG
Trigger: CCCTGAAGAATCTGTAATTCAGGAGGAAATTGCAGA...TGTCTCTGGAGCCATGGGAAGTCCAGGAGAGGGTGGAAAGACGAGAACTCTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR GCA 90 bp GCCAGAGTTCTCGTCTTTCCACCCTCTCCTGGACTTCCCATGGCTCCAGAGACACTTCTTTTCTGCTGCTaGCTCAAAGCCTGTTTAAGA +
Preference number: 2 (lower is better)
Translates to: ARVLVFPPSPGLPMAPETLLFCC*LKACLR
Trigger: TCTTAAACAGGCTTTGAGGCAGCAGCAGAAAAGAAG...TGTCTCTGGAGCCATGGGAAGTCCAGGAGAGGGTGGAAAGACGAGAACTCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR GCA 90 bp CCTTCCTTTGAGCTGAGCGGAGGAGGCAACCGGGTCTCTTTAGAGGTCTGGAAGGTTATCTTCAGGAGGTaGTATTTGGGGTTCTTCATG +
Preference number: 2 (lower is better)
Translates to: PSFELSGGGNRVSLEVWKVIFRR*YLGFFM
Trigger: CATGAAGAACCCCAAATAGCACCTCCTGAAGATAAC...CTTCCAGACCTCTAAAGAGACCCGGTTGCCTCCTCCGCTCAGCTCAAAGGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR CAA 90 bp CTCCCGCCACTGACAGATGTGCTAGTGGATGCTCGAGACTCAGGTTaGGAGACTGGTTGGCTCTTGATTATAAAAGGTGGCCCAATTTTG +
Preference number: 2 (lower is better)
Translates to: LPPLTDVLVDARDSG*ETGWLLIIKGGPIL
Trigger: CAAAATTGGGCCACCTTTTATAATCAAGAGCCAACCAGTCTCCAAACCTGAGTCTCGAGCATCCACTAGCACATCTGTCAGTGGCGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR CAA 90 bp AGGCAACCGGGTCTCTTTAGAGGTCTGGAAGAGATGGGCTCGAGCTaGATGCTTTGCAAAGAGCTTAGCCTTTGTCTGCTCTTTGATGTG +
Preference number: 2 (lower is better)
Translates to: RQPGLFRGLEEMGSS*MLCKELSLCLLFDV
Trigger: CACATCAAAGAGCAGACAAAGGCTAAGCTCTTTGCAAAGCATCAAGCTCGAGCCCATCTCTTCCAGACCTCTAAAGAGACCCGGTTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR CAA 90 bp GACTGCTGTAGTACAGTGGTGGTCTCCCGGAGGTGGGCAGACTTGTaGCTAGGAGATCTACAGTTTGGATTGACAATAATGACACCAGTC +
Preference number: 2 (lower is better)
Translates to: DCCSTVVVSRRWADL*LGDLQFGLTIMTPV
Trigger: GACTGGTGTCATTATTGTCAATCCAAACTGTAGATCTCCTAGCAACAAGTCTGCCCACCTCCGGGAGACCACCACTGTACTACAGCAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR TCA 90 bp GGCTGGTACAGGCTCCCTCTGGGCTCTCAGAAGAAAAGGACGTTTCAGAGATGCCAACACGAAAGCAGCTaGGGCTCTAATATAATCATC +
Preference number: 2 (lower is better)
Translates to: GWYRLPLGSQKKRTFQRCQHESS*GSNIII
Trigger: GATGATTATATTAGAGCCTCAGCTGCTTTCGTGTTG...GCATCTCTGAAACGTCCTTTTCTTCTGAGAGCCCAGAGGGAGCCTGTACCAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593195.6
3UTR-3UTR TCA 90 bp GTTCTCGTCTTTCCACCCTCTCCTGGACTTCCCATGGCTCCAGAGACAATGCTCTTAGAGCTGAAGTACTaGGGCGTAAAATTCCATCAC +
Preference number: 2 (lower is better)
Translates to: VLVFPPSPGLPMAPETMLLELKY*GVKFHH
Trigger: GTGATGGAATTTTACGCCTCAGTACTTCAGCTCTAA...GAGCATTGTCTCTGGAGCCATGGGAAGTCCAGGAGAGGGTGGAAAGACGAGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR TCA 90 bp GGCAGGCTGGTACAGGCTCCCTCTGGGCTCTCAGAAGAAAAGGACGTTTCAGAGGATCAAGATATCCTCTaGCTCCAATTCTGCCATTAT +
Preference number: 2 (lower is better)
Translates to: GRLVQAPSGLSEEKDVSEDQDIL*LQFCHY
Trigger: ATAATGGCAGAATTGGAGTCAGAGGATATCTTGATC...CTCTGAAACGTCCTTTTCTTCTGAGAGCCCAGAGGGAGCCTGTACCAGCCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR TCA 90 bp GTTCTCGTCTTTCCACCCTCTCCTGGACTTCCCATGGCTCCAGAGACAATGCTCTCTGTGTCACTGACATaGGTCATAGATGAAGTGGAA +
Preference number: 2 (lower is better)
Translates to: VLVFPPSPGLPMAPETMLSVSLT*VIDEVE
Trigger: TTCCACTTCATCTATGACTCATGTCAGTGACACAGA...GAGCATTGTCTCTGGAGCCATGGGAAGTCCAGGAGAGGGTGGAAAGACGAGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR TCA 90 bp TACAGTGGTGGTCTCCCGGAGGTGGGCAGACTTGTTGCTAGGAGATCTACAGTTCTCTACTGCAGTTTCTaGCTCCTTATGTTCTGTGTC +
Preference number: 2 (lower is better)
Translates to: YSGGLPEVGRLVARRSTVLYCSF*LLMFCV
Trigger: GACACAGAACATAAGGAGTCAGAAACTGCAGTAGAG...AACTGTAGATCTCCTAGCAACAAGTCTGCCCACCTCCGGGAGACCACCACTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR TCA 90 bp ACAGTGGTGGTCTCCCGGAGGTGGGCAGACTTGTTGCTAGGAGATCTACAGTTTGATTTACAGGTTTGCTaGCTCAGGGTCTTATTGTGC +
Preference number: 2 (lower is better)
Translates to: TVVVSRRWADLLLGDLQFDLQVC*LRVLLC
Trigger: GCACAATAAGACCCTGAGTCAGCAAACCTGTAAATC...AAACTGTAGATCTCCTAGCAACAAGTCTGCCCACCTCCGGGAGACCACCACTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR GCA 90 bp TACAGTGGTGGTCTCCCGGAGGTGGGCAGACTTGTTGCTAGGAGATCTACAGTTGAAGGCGAATCCGACTaGTCATCAGACACCTTTAAT +
Preference number: 2 (lower is better)
Translates to: YSGGLPEVGRLVARRSTVEGESD*SSDTFN
Trigger: ATTAAAGGTGTCTGATGAGCAGTCGGATTCGCCTTC...AACTGTAGATCTCCTAGCAACAAGTCTGCCCACCTCCGGGAGACCACCACTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR GCA 90 bp AGGGGGAACCCTTGGTTCCTCTCTGGGAGGCTGTTCTTTCTCAGGTGGGCTGCTTTTCCACCCTTGTGCTaGATATGCAAAGAATTCATT +
Preference number: 2 (lower is better)
Translates to: RGNPWFLSGRLFFLRWAAFPPLC*ICKEFI
Trigger: AATGAATTCTTTGCATATGCAGCACAAGGGTGGAAA...AGCAGCCCACCTGAGAAAGAACAGCCTCCCAGAGAGGAACCAAGGGTTCCCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR GCA 90 bp CCTTCCTTTGAGCTGAGCGGAGGAGGCAACCGGGTCTCTTTAGAGGTCTGGAAGATTCCTCTCTTGACATaGCCAGCTTTTCTCCATAAA +
Preference number: 2 (lower is better)
Translates to: PSFELSGGGNRVSLEVWKIPLLT*PAFLHK
Trigger: TTTATGGAGAAAAGCTGGGCATGTCAAGAGAGGAAT...CTTCCAGACCTCTAAAGAGACCCGGTTGCCTCCTCCGCTCAGCTCAAAGGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR GCA 90 bp AGGTTTGGCAGTGGCGGAAGACTCATCTTTCTGCGGGGAGAGTGGCTCTTCAGAGTTATCTTCAGGAGGTaGTATTTGGGGTTCTTCATG +
Preference number: 2 (lower is better)
Translates to: RFGSGGRLIFLRGEWLFRVIFRR*YLGFFM
Trigger: CATGAAGAACCCCAAATAGCACCTCCTGAAGATAAC...TCTGAAGAGCCACTCTCCCCGCAGAAAGATGAGTCTTCCGCCACTGCCAAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CCA 90 bp CTTGGGTTAAGAGACTGCTGTAGTACAGTGGTGGTCTCCCGGAGGTGGGCAGACGACAAGAATAGATCCTaGGGTTTCTATGTCAATGTC +
Preference number: 2 (lower is better)
Translates to: LGLRDCCSTVVVSRRWADDKNRS*GFYVNV
Trigger: GACATTGACATAGAAACCCCAGGATCTATTCTTGTC...GTCTGCCCACCTCCGGGAGACCACCACTGTACTACAGCAGTCTCTTAACCCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593195.6
3UTR-3UTR CCA 90 bp GACAGATGTGCTAGTGGATGCTCGAGACTCAGGTTTGGAGACTGGTTGGCTCTTAGGCTCTGGAGAAGCTaGGCTTTTCATGCTTTTTGG +
Preference number: 2 (lower is better)
Translates to: DRCASGCSRLRFGDWLALRLWRS*AFHAFW
Trigger: CCAAAAAGCATGAAAAGCCCAGCTTCTCCAGAGCCT...AAGAGCCAACCAGTCTCCAAACCTGAGTCTCGAGCATCCACTAGCACATCTGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR CAA 90 bp AGAGACTGCTGTAGTACAGTGGTGGTCTCCCGGAGGTGGGCAGACTaGTTGCTAGGAGATCTACAGTTTGGATTGACAATAATGACACCA +
Preference number: 2 (lower is better)
Translates to: RDCCSTVVVSRRWAD*LLGDLQFGLTIMTP
Trigger: TGGTGTCATTATTGTCAATCCAAACTGTAGATCTCCTAGCAACAAGTCTGCCCACCTCCGGGAGACCACCACTGTACTACAGCAGTCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR TCA 90 bp TGCTCTTTGATGTGTGCCAGAGTTCTCGTCTTTCCACCCTCTCCTGGACTTCCCATTCGAGTGTTAGTGTaGAGCATTGCATTCAGACAG +
Preference number: 2 (lower is better)
Translates to: CSLMCARVLVFPPSPGLPIRVLV*SIAFRQ
Trigger: CTGTCTGAATGCAATGCTTCACACTAACACTCGAAT...GGGAAGTCCAGGAGAGGGTGGAAAGACGAGAACTCTGGCACACATCAAAGAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR TCA 90 bp TTACTTGGGTTAAGAGACTGCTGTAGTACAGTGGTGGTCTCCCGGAGGTGGGCATTAGAGCTGAAGTACTaGGGCGTAAAATTCCATCAC +
Preference number: 2 (lower is better)
Translates to: LLGLRDCCSTVVVSRRWALELKY*GVKFHH
Trigger: GTGATGGAATTTTACGCCTCAGTACTTCAGCTCTAA...TGCCCACCTCCGGGAGACCACCACTGTACTACAGCAGTCTCTTAACCCAAGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR TCA 90 bp CTTTGTCTGCTCTTTGATGTGTGCCAGAGTTCTCGTCTTTCCACCCTCTCCTGGCATGAAGAACTACTTTaGGCTCCAGCGTTGTTTGGT +
Preference number: 2 (lower is better)
Translates to: LCLLFDVCQSSRLSTLSWHEELL*APALFG
Trigger: ACCAAACAACGCTGGAGCTCAAAGTAGTTCTTCATG...CCAGGAGAGGGTGGAAAGACGAGAACTCTGGCACACATCAAAGAGCAGACAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR TCA 90 bp GACAGATGTGCTAGTGGATGCTCGAGACTCAGGTTTGGAGACTGGTTGGCTCTTCTCTACTGCAGTTTCTaGCTCCTTATGTTCTGTGTC +
Preference number: 2 (lower is better)
Translates to: DRCASGCSRLRFGDWLALLYCSF*LLMFCV
Trigger: GACACAGAACATAAGGAGTCAGAAACTGCAGTAGAG...AAGAGCCAACCAGTCTCCAAACCTGAGTCTCGAGCATCCACTAGCACATCTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR TCA 90 bp ACAGTGGTGGTCTCCCGGAGGTGGGCAGACTTGTTGCTAGGAGATCTACAGTTTCTCAGTGTCAACATGTaGTTTACAGGTTTGCTGACT +
Preference number: 2 (lower is better)
Translates to: TVVVSRRWADLLLGDLQFLSVNM*FTGLLT
Trigger: AGTCAGCAAACCTGTAAATCACATGTTGACACTGAG...AAACTGTAGATCTCCTAGCAACAAGTCTGCCCACCTCCGGGAGACCACCACTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR GCA 90 bp AAGAGTAGCACAGAAACCAGGCTCTGGAGAAGCTGGGCTTTTCATGCTTTTTGGTTCTCCATGGGCATTTaGCTCGGCCATATCTGTACC +
Preference number: 2 (lower is better)
Translates to: KSSTETRLWRSWAFHAFWFSMGI*LGHICT
Trigger: GGTACAGATATGGCCGAGGCAAATGCCCATGGAGAA...CCAAAAAGCATGAAAAGCCCAGCTTCTCCAGAGCCTGGTTTCTGTGCTACTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR GCA 90 bp AGGTTTGGCAGTGGCGGAAGACTCATCTTTCTGCGGGGAGAGTGGCTCTTCAGAGCTTCATCAGTTACCTaGTTCGAACAAACTCCATTT +
Preference number: 2 (lower is better)
Translates to: RFGSGGRLIFLRGEWLFRASSVT*FEQTPF
Trigger: AAATGGAGTTTGTTCGAAGCAGGTAACTGATGAAGC...TCTGAAGAGCCACTCTCCCCGCAGAAAGATGAGTCTTCCGCCACTGCCAAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR GCA 90 bp TACAGTGGTGGTCTCCCGGAGGTGGGCAGACTTGTTGCTAGGAGATCTACAGTTATCTCGAGTGGAAGATaGTTCATCAGTTACCTGCTT +
Preference number: 2 (lower is better)
Translates to: YSGGLPEVGRLVARRSTVISSGR*FISYLL
Trigger: AAGCAGGTAACTGATGAAGCATCTTCCACTCGAGAT...AACTGTAGATCTCCTAGCAACAAGTCTGCCCACCTCCGGGAGACCACCACTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR GCA 90 bp GCCAGAGTTCTCGTCTTTCCACCCTCTCCTGGACTTCCCATGGCTCCAGAGACATTTCCACCCTTGTGCTaGATATGCAAAGAATTCATT +
Preference number: 2 (lower is better)
Translates to: ARVLVFPPSPGLPMAPETFPPLC*ICKEFI
Trigger: AATGAATTCTTTGCATATGCAGCACAAGGGTGGAAA...TGTCTCTGGAGCCATGGGAAGTCCAGGAGAGGGTGGAAAGACGAGAACTCTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR GCA 90 bp CTGATGACTTGGAAGTATGTGAGGTTTCTAACCGACTCTGTGTACTCCCTTGCTGGTAAACTCTCCTTCTaGCAGTCGCTGTTTCCACCC +
Preference number: 2 (lower is better)
Translates to: LMTWKYVRFLTDSVYSLAGKLSF*QSLFPP
Trigger: GGGTGGAAACAGCGACTGGCAGAAGGAGAGTTTACC...AGCAAGGGAGTACACAGAGTCGGTTAGAAACCTCACATACTTCCAAGTCATCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR GCA 90 bp GTTCCTCCCGCCACTGACAGATGTGCTAGTGGATGCTCGAGACTCAGGTTTGGAATTCCTCTCTTGACATaGCCAGCTTTTCTCCATAAA +
Preference number: 2 (lower is better)
Translates to: VPPATDRCASGCSRLRFGIPLLT*PAFLHK
Trigger: TTTATGGAGAAAAGCTGGGCATGTCAAGAGAGGAAT...TCCAAACCTGAGTCTCGAGCATCCACTAGCACATCTGTCAGTGGCGGGAGGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR GCA 90 bp TACAGTGGTGGTCTCCCGGAGGTGGGCAGACTTGTTGCTAGGAGATCTACAGTTGTTATCTTCAGGAGGTaGTATTTGGGGTTCTTCATG +
Preference number: 2 (lower is better)
Translates to: YSGGLPEVGRLVARRSTVVIFRR*YLGFFM
Trigger: CATGAAGAACCCCAAATAGCACCTCCTGAAGATAAC...AACTGTAGATCTCCTAGCAACAAGTCTGCCCACCTCCGGGAGACCACCACTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR GCA 90 bp CCTTCCTTTGAGCTGAGCGGAGGAGGCAACCGGGTCTCTTTAGAGGTCTGGAAGATTCCAAAGCTGTGTTaGTCTGCAGTTTTTCTCTTT +
Preference number: 2 (lower is better)
Translates to: PSFELSGGGNRVSLEVWKIPKLC*SAVFLF
Trigger: AAAGAGAAAAACTGCAGAGCAACACAGCTTTGGAAT...CTTCCAGACCTCTAAAGAGACCCGGTTGCCTCCTCCGCTCAGCTCAAAGGAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CCA 90 bp TACAGTGGTGGTCTCCCGGAGGTGGGCAGACTTGTTGCTAGGAGATCTACAGTTTTATTTTGGGGGTACTaGTCTCTACTGCAGTTTCTG +
Preference number: 2 (lower is better)
Translates to: YSGGLPEVGRLVARRSTVLFWGY*SLLQFL
Trigger: CAGAAACTGCAGTAGAGACCAGTACCCCCAAAATAA...AACTGTAGATCTCCTAGCAACAAGTCTGCCCACCTCCGGGAGACCACCACTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CCA 90 bp CGGAGGTGGGCAGACTTGTTGCTAGGAGATCTACAGTTTGGATTGACAATAATGGGTACAGGCTCCCTCTaGGCTCTCAGAAGAAAAGGA +
Preference number: 2 (lower is better)
Translates to: RRWADLLLGDLQFGLTIMGTGSL*ALRRKG
Trigger: TCCTTTTCTTCTGAGAGCCCAGAGGGAGCCTGTACC...CATTATTGTCAATCCAAACTGTAGATCTCCTAGCAACAAGTCTGCCCACCTCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CCA 90 bp GCAGTTTCTGGAAGTTTACTTGGGTTAAGAGACTGCTGTAGTACAGTGGTGGTCGGTACAGGCTCCCTCTaGGCTCTCAGAAGAAAAGGA +
Preference number: 2 (lower is better)
Translates to: AVSGSLLGLRDCCSTVVVGTGSL*ALRRKG
Trigger: TCCTTTTCTTCTGAGAGCCCAGAGGGAGCCTGTACC...GACCACCACTGTACTACAGCAGTCTCTTAACCCAAGTAAACTTCCAGAAACTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CCA 90 bp TCTCTGAATCTCTACTTTCATTTCTTATCCCATCAGGTGACTTGGAGGGCTCTGCTGTGTTTCCCCTCCTaGAGAAGGCAGGCTGGTACA +
Preference number: 2 (lower is better)
Translates to: SLNLYFHFLSHQVTWRALLCFPS*RRQAGT
Trigger: TGTACCAGCCTGCCTTCTCCAGGAGGGGAAACACAG...CAGAGCCCTCCAAGTCACCTGATGGGATAAGAAATGAAAGTAGAGATTCAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR TCA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTAAACCTCTGCAAGGTCTaGAGCCAGAATGAATGGGTG +
Preference number: 2 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVNLCKV*SQNEWV
Trigger: CACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTT...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR TCA 90 bp GCAGTTTCTGGAAGTTTACTTGGGTTAAGAGACTGCTGTAGTACAGTGGTGGTCCATTTCCGGAAGGAATaGACGGAACCACTCCAATGC +
Preference number: 2 (lower is better)
Translates to: AVSGSLLGLRDCCSTVVVHFRKE*TEPLQC
Trigger: GCATTGGAGTGGTTCCGTTCATTCCTTCCGGAAATG...GACCACCACTGTACTACAGCAGTCTCTTAACCCAAGTAAACTTCCAGAAACTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR TCA 90 bp CCATCAGGTGACTTGGAGGGCTCTGATGACTTGGAAGTATGTGAGGTTTCTAACGAGAGCATAGAGGCCTaGCTTTCCAGGGATTTTGAA +
Preference number: 2 (lower is better)
Translates to: PSGDLEGSDDLEVCEVSNESIEA*LSRDFE
Trigger: TTCAAAATCCCTGGAAAGTCAGGCCTCTATGCTCTC...GTTAGAAACCTCACATACTTCCAAGTCATCAGAGCCCTCCAAGTCACCTGATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR TCA 90 bp CTTTGTCTGCTCTTTGATGTGTGCCAGAGTTCTCGTCTTTCCACCCTCTCCTGGTTAGAGCTGAAGTACTaGGGCGTAAAATTCCATCAC +
Preference number: 2 (lower is better)
Translates to: LCLLFDVCQSSRLSTLSWLELKY*GVKFHH
Trigger: GTGATGGAATTTTACGCCTCAGTACTTCAGCTCTAA...CCAGGAGAGGGTGGAAAGACGAGAACTCTGGCACACATCAAAGAGCAGACAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR TCA 90 bp GACAGATGTGCTAGTGGATGCTCGAGACTCAGGTTTGGAGACTGGTTGGCTCTTTCTGCAATTTCCTCCTaGATTACAGATTCTTCAGGG +
Preference number: 2 (lower is better)
Translates to: DRCASGCSRLRFGDWLALSAISS*ITDSSG
Trigger: CCCTGAAGAATCTGTAATTCAGGAGGAAATTGCAGA...AAGAGCCAACCAGTCTCCAAACCTGAGTCTCGAGCATCCACTAGCACATCTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR TCA 90 bp GACAGATGTGCTAGTGGATGCTCGAGACTCAGGTTTGGAGACTGGTTGGCTCTTTCTGTGTCACTGACATaGGTCATAGATGAAGTGGAA +
Preference number: 2 (lower is better)
Translates to: DRCASGCSRLRFGDWLALSVSLT*VIDEVE
Trigger: TTCCACTTCATCTATGACTCATGTCAGTGACACAGA...AAGAGCCAACCAGTCTCCAAACCTGAGTCTCGAGCATCCACTAGCACATCTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR GCA 90 bp GGAAGTTTACTTGGGTTAAGAGACTGCTGTAGTACAGTGGTGGTCTCCCGGAGGATCTTCAGACGGAAATaGTTCAGGAGCAATGGAAGA +
Preference number: 2 (lower is better)
Translates to: GSLLGLRDCCSTVVVSRRIFRRK*FRSNGR
Trigger: TCTTCCATTGCTCCTGAAGCATTTCCGTCTGAAGAT...CCTCCGGGAGACCACCACTGTACTACAGCAGTCTCTTAACCCAAGTAAACTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CCA 90 bp TATGATGGGTTCGGGAGTATTAGACAGATTCTTCTGCTGGGAGGTAAGGTTCTCAGCTCCAGCGTTGTTTaGTCCAGTAGTGAGCTTCAC +
Preference number: 2 (lower is better)
Translates to: YDGFGSIRQILLLGGKVLSSSVV*SSSELH
Trigger: GTGAAGCTCACTACTGGACCAAACAACGCTGGAGCT...GAGAACCTTACCTCCCAGCAGAAGAATCTGTCTAATACTCCCGAACCCATCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CCA 90 bp CCATCAGGTGACTTGGAGGGCTCTGATGACTTGGAAGTATGTGAGGTTTCTAACACAGAAACCAGGCTCTaGAGAAGCTGGGCTTTTCAT +
Preference number: 2 (lower is better)
Translates to: PSGDLEGSDDLEVCEVSNTETRL*RSWAFH
Trigger: ATGAAAAGCCCAGCTTCTCCAGAGCCTGGTTTCTGT...GTTAGAAACCTCACATACTTCCAAGTCATCAGAGCCCTCCAAGTCACCTGATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CCA 90 bp GACAGATGTGCTAGTGGATGCTCGAGACTCAGGTTTGGAGACTGGTTGGCTCTTAAGGAAGTGGCAAACTaGATACAAAAGTGGTCTCAG +
Preference number: 2 (lower is better)
Translates to: DRCASGCSRLRFGDWLALKEVAN*IQKWSQ
Trigger: CTGAGACCACTTTTGTATCCAGTTTGCCACTTCCTT...AAGAGCCAACCAGTCTCCAAACCTGAGTCTCGAGCATCCACTAGCACATCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR CAA 90 bp CTTTCATTTCTTATCCCATCAGGTGACTTGGAGGGCTCTGATGACTaGGAAGTATGTGAGGTTTCTAACCGACTCTGTGTACTCCCTTGC +
Preference number: 2 (lower is better)
Translates to: LSFLIPSGDLEGSDD*EVCEVSNRLCVLPC
Trigger: GCAAGGGAGTACACAGAGTCGGTTAGAAACCTCACATACTTCCAAGTCATCAGAGCCCTCCAAGTCACCTGATGGGATAAGAAATGAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR CAA 90 bp TCCCGGAGGTGGGCAGACTTGTTGCTAGGAGATCTACAGTTTGGATaGACAATAATGACACCAGTCGAACCTTCCATTTTTGTTTCAGGG +
Preference number: 2 (lower is better)
Translates to: SRRWADLLLGDLQFG*TIMTPVEPSIFVSG
Trigger: CCCTGAAACAAAAATGGAAGGTTCGACTGGTGTCATTATTGTCAATCCAAACTGTAGATCTCCTAGCAACAAGTCTGCCCACCTCCGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR TCA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTGAAAACAGAGCCTCCTaGACTACGGCTGTCCTCTGG +
Preference number: 2 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPENRAS*TTAVLW
Trigger: CCAGAGGACAGCCGTAGTTCAGGAGGCTCTGTTTTC...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR TCA 90 bp CGGAGGTGGGCAGACTTGTTGCTAGGAGATCTACAGTTTGGATTGACAATAATGGAGAGCATAGAGGCCTaGCTTTCCAGGGATTTTGAA +
Preference number: 2 (lower is better)
Translates to: RRWADLLLGDLQFGLTIMESIEA*LSRDFE
Trigger: TTCAAAATCCCTGGAAAGTCAGGCCTCTATGCTCTC...CATTATTGTCAATCCAAACTGTAGATCTCCTAGCAACAAGTCTGCCCACCTCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR TCA 90 bp TACAGTGGTGGTCTCCCGGAGGTGGGCAGACTTGTTGCTAGGAGATCTACAGTTTCAGGTATTGTCTTATaGTTTTCATCCTGGCATTCA +
Preference number: 2 (lower is better)
Translates to: YSGGLPEVGRLVARRSTVSGIVL*FSSWHS
Trigger: TGAATGCCAGGATGAAAATCATAAGACAATACCTGA...AACTGTAGATCTCCTAGCAACAAGTCTGCCCACCTCCGGGAGACCACCACTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR TCA 90 bp TTACTTGGGTTAAGAGACTGCTGTAGTACAGTGGTGGTCTCCCGGAGGTGGGCATCACAGACTTCTAACTaGTCGATAACAACTGTCATT +
Preference number: 2 (lower is better)
Translates to: LLGLRDCCSTVVVSRRWASQTSN*SITTVI
Trigger: AATGACAGTTGTTATCGATCAGTTAGAAGTCTGTGA...TGCCCACCTCCGGGAGACCACCACTGTACTACAGCAGTCTCTTAACCCAAGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR TCA 90 bp GCTAGTGGATGCTCGAGACTCAGGTTTGGAGACTGGTTGGCTCTTGATTATAAACCAATTTTGGAAAGCTaGATCTTGAGAGGGGGAACC +
Preference number: 2 (lower is better)
Translates to: ASGCSRLRFGDWLALDYKPILES*ILRGGT
Trigger: GGTTCCCCCTCTCAAGATTCAGCTTTCCAAAATTGG...TTTATAATCAAGAGCCAACCAGTCTCCAAACCTGAGTCTCGAGCATCCACTAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR GCA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTAGCCATTCAGTTGGGATaGATCCTCCCCTTTATGAGA +
Preference number: 2 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVAIQLG*ILPFMR
Trigger: TCTCATAAAGGGGAGGATGCATCCCAACTGAATGGC...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR GCA 90 bp GACAGATGTGCTAGTGGATGCTCGAGACTCAGGTTTGGAGACTGGTTGGCTCTTCTCAGGGTCTTATTGTaGAAATCTTCAGACGGAAAT +
Preference number: 2 (lower is better)
Translates to: DRCASGCSRLRFGDWLALLRVLL*KSSDGN
Trigger: ATTTCCGTCTGAAGATTTGCACAATAAGACCCTGAG...AAGAGCCAACCAGTCTCCAAACCTGAGTCTCGAGCATCCACTAGCACATCTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CCA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTAAGTGAGCCATTCAGTTaGGATGCATCCTCCCCTTTA +
Preference number: 2 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVSEPFS*DASSPL
Trigger: TAAAGGGGAGGATGCATCCCAACTGAATGGCTCACT...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR CCA 90 bp TGCTCTTTGATGTGTGCCAGAGTTCTCGTCTTTCCACCCTCTCCTGGACTTCCCTTGTTTGTTTTCCAGTaGGAGATTTTTGCCCATGTT +
Preference number: 2 (lower is better)
Translates to: CSLMCARVLVFPPSPGLPLFVFQ*EIFAHV
Trigger: AACATGGGCAAAAATCTCCCACTGGAAAACAAACAA...GGGAAGTCCAGGAGAGGGTGGAAAGACGAGAACTCTGGCACACATCAAAGAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593195.6
3UTR-3UTR CCA 90 bp ACGTTTCAGAGATGCAGGCATTTTCTGAAAGCTGTTCTTCAGGGTCACTCTGTAAGCTCCAGCGTTGTTTaGTCCAGTAGTGAGCTTCAC +
Preference number: 2 (lower is better)
Translates to: TFQRCRHFLKAVLQGHSVSSSVV*SSSELH
Trigger: GTGAAGCTCACTACTGGACCAAACAACGCTGGAGCT...TACAGAGTGACCCTGAAGAACAGCTTTCAGAAAATGCCTGCATCTCTGAAACGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CCA 90 bp ACGTTTCAGAGATGCAGGCATTTTCTGAAAGCTGTTCTTCAGGGTCACTCTGTATGTCTGTGCAGAAACTaGAAGGCCAGAAGTCCCACA +
Preference number: 2 (lower is better)
Translates to: TFQRCRHFLKAVLQGHSVCLCRN*KARSPT
Trigger: TGTGGGACTTCTGGCCTTCCAGTTTCTGCACAGACA...TACAGAGTGACCCTGAAGAACAGCTTTCAGAAAATGCCTGCATCTCTGAAACGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CCA 90 bp CTGATGACTTGGAAGTATGTGAGGTTTCTAACCGACTCTGTGTACTCCCTTGCTAGGCTCTGGAGAAGCTaGGCTTTTCATGCTTTTTGG +
Preference number: 2 (lower is better)
Translates to: LMTWKYVRFLTDSVYSLARLWRS*AFHAFW
Trigger: CCAAAAAGCATGAAAAGCCCAGCTTCTCCAGAGCCT...AGCAAGGGAGTACACAGAGTCGGTTAGAAACCTCACATACTTCCAAGTCATCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CCA 90 bp CTTTGTCTGCTCTTTGATGTGTGCCAGAGTTCTCGTCTTTCCACCCTCTCCTGGGTTCTTCATGAGAATTaGTTAGACTTTCAGCCTCCT +
Preference number: 2 (lower is better)
Translates to: LCLLFDVCQSSRLSTLSWVLHEN*LDFQPP
Trigger: AGGAGGCTGAAAGTCTAACCAATTCTCATGAAGAAC...CCAGGAGAGGGTGGAAAGACGAGAACTCTGGCACACATCAAAGAGCAGACAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CCA 90 bp TCTCTGAATCTCTACTTTCATTTCTTATCCCATCAGGTGACTTGGAGGGCTCTGGACAGATTCTTCTGCTaGGAGGTAAGGTTCTCTCCC +
Preference number: 2 (lower is better)
Translates to: SLNLYFHFLSHQVTWRALDRFFC*EVRFSP
Trigger: GGGAGAGAACCTTACCTCCCAGCAGAAGAATCTGTC...CAGAGCCCTCCAAGTCACCTGATGGGATAAGAAATGAAAGTAGAGATTCAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR CAA 90 bp GACAGATGTGCTAGTGGATGCTCGAGACTCAGGTTTGGAGACTGGTaGGCTCTTGATTATAAAAGGTGGCCCAATTTTGGAAAGCTGAAT +
Preference number: 2 (lower is better)
Translates to: DRCASGCSRLRFGDW*ALDYKRWPNFGKLN
Trigger: ATTCAGCTTTCCAAAATTGGGCCACCTTTTATAATCAAGAGCCAACCAGTCTCCAAACCTGAGTCTCGAGCATCCACTAGCACATCTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR TCA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACACCAGATTGCTGGGCATaGGTCCCATGCAATTTCAGA +
Preference number: 2 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTPDCWA*VPCNFR
Trigger: TCTGAAATTGCATGGGACTCATGCCCAGCAATCTGG...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR TCA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACAGGCTGTCCTCTGGTATaGGGGTGGCCAAAATATATG +
Preference number: 2 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTGCPLV*GWPKYM
Trigger: CATATATTTTGGCCACCCTCATACCAGAGGACAGCC...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR TCA 90 bp GACAGATGTGCTAGTGGATGCTCGAGACTCAGGTTTGGAGACTGGTTGGCTCTTTCAGGTATTGTCTTATaGTTTTCATCCTGGCATTCA +
Preference number: 2 (lower is better)
Translates to: DRCASGCSRLRFGDWLALSGIVL*FSSWHS
Trigger: TGAATGCCAGGATGAAAATCATAAGACAATACCTGA...AAGAGCCAACCAGTCTCCAAACCTGAGTCTCGAGCATCCACTAGCACATCTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR GCA 90 bp CCATCAGGTGACTTGGAGGGCTCTGATGACTTGGAAGTATGTGAGGTTTCTAACCTGTTTCCACCCTTGTaGTGCATATGCAAAGAATTC +
Preference number: 2 (lower is better)
Translates to: PSGDLEGSDDLEVCEVSNLFPPL*CICKEF
Trigger: GAATTCTTTGCATATGCAGCACAAGGGTGGAAACAG...GTTAGAAACCTCACATACTTCCAAGTCATCAGAGCCCTCCAAGTCACCTGATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CCA 90 bp CAGGTATGTTTTCATCAGAACTATGCACAGATAAGTCAGTGGCAGTTTCTGGAATCTCTCCCAGAGGTTTaGCAGTGGCGGAAGACTCAT +
Preference number: 2 (lower is better)
Translates to: QVCFHQNYAQISQWQFLESLPEV*QWRKTH
Trigger: ATGAGTCTTCCGCCACTGCCAAACCTCTGGGAGAGA...TTCCAGAAACTGCCACTGACTTATCTGTGCATAGTTCTGATGAAAACATACCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR CAA 90 bp CAGTTACCTGCTTCGAACAAACTCCATTTTCTTCTCCATGGGCATTaGCCTCGGCCATATCTGTACCATCCAATTCAGATTCACAGACTA +
Preference number: 2 (lower is better)
Translates to: QLPASNKLHFLLHGH*PRPYLYHPIQIHRL
Trigger: TAGTCTGTGAATCTGAATTGGATGGTACAGATATGGCCGAGGCAAATGCCCATGGAGAAGAAAATGGAGTTTGTTCGAAGCAGGTAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
3UTR CAA 90 bp TGTTTAAGAGCCTTTTTGGTGTGCTGCTGGAAGGAAGACACTAACTaGCTTTGCACTGCTGTGTTAGTAAGGCTTGAATCTCGAGTGGAA +
Preference number: 2 (lower is better)
Translates to: CLRAFLVCCWKEDTN*LCTAVLVRLESRVE
Trigger: TTCCACTCGAGATTCAAGCCTTACTAACACAGCAGTGCAAAGCAAGTTAGTGTCTTCCTTCCAGCAGCACACCAAAAAGGCTCTTAAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR TCA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTCCAGATTGCTGGGCATaGGTCCCATGCAATTTCAGA +
Preference number: 2 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPPDCWA*VPCNFR
Trigger: TCTGAAATTGCATGGGACTCATGCCCAGCAATCTGG...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR TCA 90 bp AAACTCCATTTTCTTCTCCATGGGCATTTGCCTCGGCCATATCTGTACCATCCAACTTTCCAGGGATTTTaGAGAATGTTCCATCCCCTA +
Preference number: 2 (lower is better)
Translates to: KLHFLLHGHLPRPYLYHPTFQGF*RMFHPL
Trigger: TAGGGGATGGAACATTCTTCAAAATCCCTGGAAAGT...TGGATGGTACAGATATGGCCGAGGCAAATGCCCATGGAGAAGAAAATGGAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR TCA 90 bp GATGACTTGGAAGTATGTGAGGTTTCTAACCGACTCTGTGTACTCCCTTGCTTACTCTACTGCAGTTTCTaGCTCCTTATGTTCTGTGTC +
Preference number: 2 (lower is better)
Translates to: DDLEVCEVSNRLCVLPCLLYCSF*LLMFCV
Trigger: GACACAGAACATAAGGAGTCAGAAACTGCAGTAGAG...TAAGCAAGGGAGTACACAGAGTCGGTTAGAAACCTCACATACTTCCAAGTCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR TCA 90 bp CGGAGGTGGGCAGACTTGTTGCTAGGAGATCTACAGTTTGGATTGACAATAATGATTTCTAGAGCCTTCTaGAAATGGAGCCTTATCCAC +
Preference number: 2 (lower is better)
Translates to: RRWADLLLGDLQFGLTIMISRAF*KWSLIH
Trigger: GTGGATAAGGCTCCATTTTCAGAAGGCTCTAGAAAT...CATTATTGTCAATCCAAACTGTAGATCTCCTAGCAACAAGTCTGCCCACCTCCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR GCA 90 bp GGCGAATCCGACTGCTCATCAGACACCTTTAATGGTGTCAAAACAACACGAGGAGCTTCATCAGTTACCTaGTTCGAACAAACTCCATTT +
Preference number: 2 (lower is better)
Translates to: GESDCSSDTFNGVKTTRGASSVT*FEQTPF
Trigger: AAATGGAGTTTGTTCGAAGCAGGTAACTGATGAAGC...TCCTCGTGTTGTTTTGACACCATTAAAGGTGTCTGATGAGCAGTCGGATTCGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CCA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTATTTGGCTTTTCCGTGTaGAAAAGGGATACTGCATCT +
Preference number: 2 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVFGFSV*KRDTAS
Trigger: AGATGCAGTATCCCTTTTCCACACGGAAAAGCCAAA...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR CCA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTAGTTGCTGATGCTATTTaGCTTTTCCGTGTGGAAAAG +
Preference number: 2 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVVADAI*LFRVEK
Trigger: CTTTTCCACACGGAAAAGCCAAATAGCATCAGCAAC...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR CCA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTTGGGCTTATGGCTATTaGCTGGCCAATTGCTCTCAT +
Preference number: 2 (lower is better)
Translates to: FKKIWPTSARSEARMNGCWAYGY*LANCSH
Trigger: ATGAGAGCAATTGGCCAGCCAATAGCCATAAGCCCA...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR CCA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACAAATCCTCTGGGCTTATaGCTATTGGCTGGCCAATTG +
Preference number: 2 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTNPLGL*LLAGQL
Trigger: CAATTGGCCAGCCAATAGCCATAAGCCCAGAGGATT...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR CCA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTACTACGGCTGTCCTCTaGTATGAGGGTGGCCAAAAT +
Preference number: 2 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPTTAVL*YEGGQN
Trigger: ATTTTGGCCACCCTCATACCAGAGGACAGCCGTAGT...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR CCA 90 bp ACAATGAAGGAACTGATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCACTACGGCTGTCCTCTaGTATGAGGGTGGCCAAAAT +
Preference number: 2 (lower is better)
Translates to: TMKELIMSSVSHQPQLYLTTAVL*YEGGQN
Trigger: ATTTTGGCCACCCTCATACCAGAGGACAGCCGTAGT...GAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTATCAGTTCCTTCATTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR CCA 90 bp ACAGGATTCCAAGTTATCTTCAGGAGGTGCTATTTGGGGTTCTTCATGAGAATTCTGCCTATCCACTTCTaGGAGCAAAAGCAGGAGGTA +
Preference number: 2 (lower is better)
Translates to: TGFQVIFRRCYLGFFMRILPIHF*EQKQEV
Trigger: TACCTCCTGCTTTTGCTCCCAGAAGTGGATAGGCAG...AATTCTCATGAAGAACCCCAAATAGCACCTCCTGAAGATAACTTGGAATCCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593195.6
3UTR-3UTR TCA 90 bp CTTGTTGCTAGGAGATCTACAGTTTGGATTGACAATAATGACACCAGTCGAACCGATTTACAGGTTTGCTaGCTCAGGGTCTTATTGTGC +
Preference number: 2 (lower is better)
Translates to: LVARRSTVWIDNNDTSRTDLQVC*LRVLLC
Trigger: GCACAATAAGACCCTGAGTCAGCAAACCTGTAAATC...GGTTCGACTGGTGTCATTATTGTCAATCCAAACTGTAGATCTCCTAGCAACAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR GCA 90 bp TGCATAACCACTTTAACTCATTCCTCTCATTCTCCTTACACATCTGCATTTCCGGCCATTCAGTTGGGATaGATCCTCCCCTTTATGAGA +
Preference number: 2 (lower is better)
Translates to: CITTLTHSSHSPYTSAFPAIQLG*ILPFMR
Trigger: TCTCATAAAGGGGAGGATGCATCCCAACTGAATGGC...CGGAAATGCAGATGTGTAAGGAGAATGAGAGGAATGAGTTAAAGTGGTTATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR GCA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACAACCTCACATACTGAGTaGAAAGGTTCTGTAGACTGG +
Preference number: 2 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTTSHTE*KGSVDW
Trigger: CCAGTCTACAGAACCTTTGCACTCAGTATGTGAGGT...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR GCA 90 bp AGGTATTGTCTTATGATTTTCATCCTGGCATTCACAGATACTAGTCTCTACCTCTTCTCCATGGGCATTTaGCTCGGCCATATCTGTACC +
Preference number: 2 (lower is better)
Translates to: RYCLMIFILAFTDTSLYLFSMGI*LGHICT
Trigger: GGTACAGATATGGCCGAGGCAAATGCCCATGGAGAA...GAGGTAGAGACTAGTATCTGTGAATGCCAGGATGAAAATCATAAGACAATACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR GCA 90 bp CTTGTTGCTAGGAGATCTACAGTTTGGATTGACAATAATGACACCAGTCGAACCTGCCTTATCCGCAACTaGATTTCTGGGGTAAACTCT +
Preference number: 2 (lower is better)
Translates to: LVARRSTVWIDNNDTSRTCLIRN*ISGVNS
Trigger: AGAGTTTACCCCAGAAATGCAGTTGCGGATAAGGCA...GGTTCGACTGGTGTCATTATTGTCAATCCAAACTGTAGATCTCCTAGCAACAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR GCA 90 bp CGGAGGTGGGCAGACTTGTTGCTAGGAGATCTACAGTTTGGATTGACAATAATGTCCTTCTCAATTTCTTaGCTTATCCGCAACTGCATT +
Preference number: 2 (lower is better)
Translates to: RRWADLLLGDLQFGLTIMSFSIS*LIRNCI
Trigger: AATGCAGTTGCGGATAAGGCAAGAAATTGAGAAGGA...CATTATTGTCAATCCAAACTGTAGATCTCCTAGCAACAAGTCTGCCCACCTCCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR GCA 90 bp GCAGTTTCTGGAAGTTTACTTGGGTTAAGAGACTGCTGTAGTACAGTGGTGGTCTCCTTCTCAATTTCTTaGCTTATCCGCAACTGCATT +
Preference number: 2 (lower is better)
Translates to: AVSGSLLGLRDCCSTVVVSFSIS*LIRNCI
Trigger: AATGCAGTTGCGGATAAGGCAAGAAATTGAGAAGGA...GACCACCACTGTACTACAGCAGTCTCTTAACCCAAGTAAACTTCCAGAAACTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CCA 90 bp ACAGGATTCCAAGTTATCTTCAGGAGGTGCTATTTGGGGTTCTTCATGAGAATTACAGAAACCAGGCTCTaGAGAAGCTGGGCTTTTCAT +
Preference number: 2 (lower is better)
Translates to: TGFQVIFRRCYLGFFMRITETRL*RSWAFH
Trigger: ATGAAAAGCCCAGCTTCTCCAGAGCCTGGTTTCTGT...AATTCTCATGAAGAACCCCAAATAGCACCTCCTGAAGATAACTTGGAATCCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CCA 90 bp ATTGACAATAATGACACCAGTCGAACCTTCCATTTTTGTTTCAGGGGTAGAAGATTTCTGCGGGGAGAGTaGCTCTTCAGATACAGAAGG +
Preference number: 2 (lower is better)
Translates to: IDNNDTSRTFHFCFRGRRFLRGE*LFRYRR
Trigger: CCTTCTGTATCTGAAGAGCCACTCTCCCCGCAGAAA...TCTTCTACCCCTGAAACAAAAATGGAAGGTTCGACTGGTGTCATTATTGTCAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CCA 90 bp ATTGACAATAATGACACCAGTCGAACCTTCCATTTTTGTTTCAGGGGTAGAAGACCAGAGGTTTGGCAGTaGCGGAAGACTCATCTTTCT +
Preference number: 2 (lower is better)
Translates to: IDNNDTSRTFHFCFRGRRPEVWQ*RKTHLS
Trigger: AGAAAGATGAGTCTTCCGCCACTGCCAAACCTCTGG...TCTTCTACCCCTGAAACAAAAATGGAAGGTTCGACTGGTGTCATTATTGTCAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR CAA 90 bp GATATCTCTGAATCTCTACTTTCATTTCTTATCCCATCAGGTGACTaGGAGGGCTCTGATGACTTGGAAGTATGTGAGGTTTCTAACCGA +
Preference number: 2 (lower is better)
Translates to: DISESLLSFLIPSGD*EGSDDLEVCEVSNR
Trigger: TCGGTTAGAAACCTCACATACTTCCAAGTCATCAGAGCCCTCCAAGTCACCTGATGGGATAAGAAATGAAAGTAGAGATTCAGAGATATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR TCA 90 bp ACAATGAAGGAACTGATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCTTCTGCCATAGTCTCTaGGAAAGTACAACAGGAGGA +
Preference number: 2 (lower is better)
Translates to: TMKELIMSSVSHQPQLYLFCHSL*ESTTGG
Trigger: TCCTCCTGTTGTACTTTCTCAGAGACTATGGCAGAA...GAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTATCAGTTCCTTCATTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR TCA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACAGGTCTGAAGCCAGAATaGATGGGTGTCATCAATAAA +
Preference number: 2 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTGLKPE*MGVINK
Trigger: TTTATTGATGACACCCATTCATTCTGGCTTCAGACC...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR TCA 90 bp TCACTCTGTAGCTCCATATCTATAGCAATTCCTTCATTTGGAAACTGGCCTTCTTGTGTTAGTAAGGCTTaGATCTCGAGTGGAAGATGC +
Preference number: 2 (lower is better)
Translates to: SLCSSISIAIPSFGNWPSCVSKA*ISSGRC
Trigger: GCATCTTCCACTCGAGATTCAAGCCTTACTAACACA...AGAAGGCCAGTTTCCAAATGAAGGAATTGCTATAGATATGGAGCTACAGAGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR TCA 90 bp TCTCTGAATCTCTACTTTCATTTCTTATCCCATCAGGTGACTTGGAGGGCTCTGGACATGAGTCATAGATaGAGTGGAAGGAATAAGAGA +
Preference number: 2 (lower is better)
Translates to: SLNLYFHFLSHQVTWRALDMSHR*SGRNKR
Trigger: TCTCTTATTCCTTCCACTTCATCTATGACTCATGTC...CAGAGCCCTCCAAGTCACCTGATGGGATAAGAAATGAAAGTAGAGATTCAGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR GCA 90 bp GAATATCCAAGGTCCAGCAGTCAACTAAACTTTCTATATAGCTCATCCCAGAAAATCCACTGGAACTTATaGTGCTTTCCTCGGGTAAGG +
Preference number: 2 (lower is better)
Translates to: EYPRSSSQLNFLYSSSQKIHWNL*CFPRVR
Trigger: CCTTACCCGAGGAAAGCAGCATAAGTTCCAGTGGAT...TTTCTGGGATGAGCTATATAGAAAGTTTAGTTGACTGCTGGACCTTGGATATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR GCA 90 bp CTGATGACTTGGAAGTATGTGAGGTTTCTAACCGACTCTGTGTACTCCCTTGCTCCAGTGGGAGATTTTTaGCCATGTTTCATTTCTTTA +
Preference number: 2 (lower is better)
Translates to: LMTWKYVRFLTDSVYSLAPVGDF*PCFISL
Trigger: TAAAGAAATGAAACATGGGCAAAAATCTCCCACTGG...AGCAAGGGAGTACACAGAGTCGGTTAGAAACCTCACATACTTCCAAGTCATCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593195.6
3UTR-3UTR CCA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACATTTGGCTTTTCCGTGTaGAAAAGGGATACTGCATCT +
Preference number: 2 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTFGFSV*KRDTAS
Trigger: AGATGCAGTATCCCTTTTCCACACGGAAAAGCCAAA...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR CCA 90 bp ACAATGAAGGAACTGATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCAGCTCTAAAATCCTCTaGGCTTATGGCTATTGGCTG +
Preference number: 2 (lower is better)
Translates to: TMKELIMSSVSHQPQLYLSSKIL*AYGYWL
Trigger: CAGCCAATAGCCATAAGCCCAGAGGATTTTAGAGCT...GAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTATCAGTTCCTTCATTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR CCA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTTGGTCATTCTTACCCTaGATACAGATGATTCCCCAC +
Preference number: 2 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPWSFLP*IQMIPH
Trigger: GTGGGGAATCATCTGTATCCAGGGTAAGAATGACCA...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR CCA 90 bp TGTCTTTATACACCTCAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATGAAGCACCAAAATCATaGCTACAGCAGCAGGCCTTT +
Preference number: 2 (lower is better)
Translates to: CLYTPQAYAYLIGGGLGNEAPKS*LQQQAF
Trigger: AAAGGCCTGCTGCTGTAGCCATGATTTTGGTGCTTC...ATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTGAGGTGTATAAAGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR CCA 90 bp AACAAAATGTTGTCTCAAGGGAGGCTGGAGTACATGATTCTTCTGATGTGGACTGGCTTGAATCTCGAGTaGAAGATGCTTCATCAGTTA +
Preference number: 2 (lower is better)
Translates to: NKMLSQGRLEYMILLMWTGLNLE*KMLHQL
Trigger: TAACTGATGAAGCATCTTCCACTCGAGATTCAAGCC...AGTCCACATCAGAAGAATCATGTACTCCAGCCTCCCTTGAGACAACATTTTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
3UTR CAA 90 bp TTAATGGTGTCAAAACAACACGAGGAACAGTCTTGTTTACCATCATaGAGACTCCATTTCTTCTTTTCTGCTGCTGCCTCAAAGCCTGTT +
Preference number: 2 (lower is better)
Translates to: LMVSKQHEEQSCLPS*RLHFFFSAAASKPV
Trigger: AACAGGCTTTGAGGCAGCAGCAGAAAAGAAGAAATGGAGTCTCAATGATGGTAAACAAGACTGTTCCTCGTGTTGTTTTGACACCATTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR TCA 90 bp ACAATGAAGGAACTGATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCTGGTATAGCAGTGAATaGATTTGGAAGGAGTTGGCA +
Preference number: 2 (lower is better)
Translates to: TMKELIMSSVSHQPQLYLWYSSE*IWKELA
Trigger: TGCCAACTCCTTCCAAATTCATTCACTGCTATACCA...GAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTATCAGTTCCTTCATTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR TCA 90 bp TATCTTCAGGAGGTGCTATTTGGGGTTCTTCATGAGAATTGGTTAGACTTTCAGACTTTCCAGGGATTTTaGAGAATGTTCCATCCCCTA +
Preference number: 2 (lower is better)
Translates to: YLQEVLFGVLHENWLDFQTFQGF*RMFHPL
Trigger: TAGGGGATGGAACATTCTTCAAAATCCCTGGAAAGT...CTGAAAGTCTAACCAATTCTCATGAAGAACCCCAAATAGCACCTCCTGAAGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR TCA 90 bp ATTGACAATAATGACACCAGTCGAACCTTCCATTTTTGTTTCAGGGGTAGAAGATGTGTTAGTAAGGCTTaGATCTCGAGTGGAAGATGC +
Preference number: 2 (lower is better)
Translates to: IDNNDTSRTFHFCFRGRRCVSKA*ISSGRC
Trigger: GCATCTTCCACTCGAGATTCAAGCCTTACTAACACA...TCTTCTACCCCTGAAACAAAAATGGAAGGTTCGACTGGTGTCATTATTGTCAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR TCA 90 bp TTTGCTGACTCAGGGTCTTATTGTGCAAATCTTCAGACGGAAATGCTTCAGGAGAATCGTTTTAAGTGCTaGCTTGTTTGTTTTCCAGTG +
Preference number: 2 (lower is better)
Translates to: FADSGSYCANLQTEMLQENRFKC*LVCFPV
Trigger: CACTGGAAAACAAACAAGTCAGCACTTAAAACGATT...CTCCTGAAGCATTTCCGTCTGAAGATTTGCACAATAAGACCCTGAGTCAGCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593195.6
3UTR-3UTR GCA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTTATTGGCTGGCCAATTaGTCTCATATTATCAGGTGT +
Preference number: 2 (lower is better)
Translates to: FKKIWPTSARSEARMNGCYWLAN*SHIIRC
Trigger: ACACCTGATAATATGAGAGCAATTGGCCAGCCAATA...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR GCA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACATGGAAGGAGTTGGCATaGAAGTGTCTATATTATAGG +
Preference number: 2 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTWKELA*KCLYYR
Trigger: CCTATAATATAGACACTTGCATGCCAACTCCTTCCA...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR GCA 90 bp GAATATCCAAGGTCCAGCAGTCAACTAAACTTTCTATATAGCTCATCCCAGAAACCCCTGCTCCAAAAGTaGTACTTAGGGAAATACATC +
Preference number: 2 (lower is better)
Translates to: EYPRSSSQLNFLYSSSQKPLLQK*YLGKYI
Trigger: GATGTATTTCCCTAAGTAGCACTTTTGGAGCAGGGG...TTTCTGGGATGAGCTATATAGAAAGTTTAGTTGACTGCTGGACCTTGGATATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR GCA 90 bp TGTCTTTATACACCTCAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATCCCCTGCTCCAAAAGTaGTACTTAGGGAAATACATC +
Preference number: 2 (lower is better)
Translates to: CLYTPQAYAYLIGGGLGNPLLQK*YLGKYI
Trigger: GATGTATTTCCCTAAGTAGCACTTTTGGAGCAGGGG...ATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTGAGGTGTATAAAGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR GCA 90 bp CAGGTATGTTTTCATCAGAACTATGCACAGATAAGTCAGTGGCAGTTTCTGGAACTTCTTTTCTGCTGCTaGCTCAAAGCCTGTTTAAGA +
Preference number: 2 (lower is better)
Translates to: QVCFHQNYAQISQWQFLELLFCC*LKACLR
Trigger: TCTTAAACAGGCTTTGAGGCAGCAGCAGAAAAGAAG...TTCCAGAAACTGCCACTGACTTATCTGTGCATAGTTCTGATGAAAACATACCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR GCA 90 bp GCAGTTTCTGGAAGTTTACTTGGGTTAAGAGACTGCTGTAGTACAGTGGTGGTCCTCTGTGTACTCCCTTaGTTATGTGTTTTATTTCTA +
Preference number: 2 (lower is better)
Translates to: AVSGSLLGLRDCCSTVVVLCVLP*LCVLFL
Trigger: TAGAAATAAAACACATAAGCAAGGGAGTACACAGAG...GACCACCACTGTACTACAGCAGTCTCTTAACCCAAGTAAACTTCCAGAAACTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CCA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTGTTGCTGATGCTATTTaGCTTTTCCGTGTGGAAAAG +
Preference number: 2 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPVADAI*LFRVEK
Trigger: CTTTTCCACACGGAAAAGCCAAATAGCATCAGCAAC...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR CCA 90 bp AATATATGGAATGTAGCTCAAATACTCAACACGCAGACTTTACTGGATGCACACAGCTCTAAAATCCTCTaGGCTTATGGCTATTGGCTG +
Preference number: 2 (lower is better)
Translates to: NIWNVAQILNTQTLLDAHSSKIL*AYGYWL
Trigger: CAGCCAATAGCCATAAGCCCAGAGGATTTTAGAGCT...GTGTGCATCCAGTAAAGTCTGCGTGTTGAGTATTTGAGCTACATTCCATATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR CCA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTGCCACAATCAATCAATaGGTTAATGGCACTCCACAT +
Preference number: 2 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPATINQ*VNGTPH
Trigger: ATGTGGAGTGCCATTAACCCATTGATTGATTGTGGC...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR CCA 90 bp TCACTCTGTAGCTCCATATCTATAGCAATTCCTTCATTTGGAAACTGGCCTTCTGGCTTGAATCTCGAGTaGAAGATGCTTCATCAGTTA +
Preference number: 2 (lower is better)
Translates to: SLCSSISIAIPSFGNWPSGLNLE*KMLHQL
Trigger: TAACTGATGAAGCATCTTCCACTCGAGATTCAAGCC...AGAAGGCCAGTTTCCAAATGAAGGAATTGCTATAGATATGGAGCTACAGAGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CCA 90 bp TATCTTCAGGAGGTGCTATTTGGGGTTCTTCATGAGAATTGGTTAGACTTTCAGTTTTTGGTGTGCTGCTaGAAGGAAGACACTAACTTG +
Preference number: 2 (lower is better)
Translates to: YLQEVLFGVLHENWLDFQFLVCC*KEDTNL
Trigger: CAAGTTAGTGTCTTCCTTCCAGCAGCACACCAAAAA...CTGAAAGTCTAACCAATTCTCATGAAGAACCCCAAATAGCACCTCCTGAAGATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR TCA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTTGTCAGTTACTGATGTaGTGGTTTTCAATTTGCTGG +
Preference number: 2 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPCQLLM*WFSICW
Trigger: CCAGCAAATTGAAAACCATCACATCAGTAACTGACA...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR GCA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTGCACATGCTAACATTTaGACACTACACCACAATAAC +
Preference number: 2 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPAHANI*TLHHNN
Trigger: GTTATTGTGGTGTAGTGTGCAAATGTTAGCATGTGC...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR GCA 90 bp GAATATCCAAGGTCCAGCAGTCAACTAAACTTTCTATATAGCTCATCCCAGAAATACACCTCAGGCATATaGATATCTTATAGGAGGAGG +
Preference number: 2 (lower is better)
Translates to: EYPRSSSQLNFLYSSSQKYTSGI*ISYRRR
Trigger: CCTCCTCCTATAAGATATGCATATGCCTGAGGTGTA...TTTCTGGGATGAGCTATATAGAAAGTTTAGTTGACTGCTGGACCTTGGATATTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR GCA 90 bp AGGTATTGTCTTATGATTTTCATCCTGGCATTCACAGATACTAGTCTCTACCTCATCTCGAGTGGAAGATaGTTCATCAGTTACCTGCTT +
Preference number: 2 (lower is better)
Translates to: RYCLMIFILAFTDTSLYLISSGR*FISYLL
Trigger: AAGCAGGTAACTGATGAAGCATCTTCCACTCGAGAT...GAGGTAGAGACTAGTATCTGTGAATGCCAGGATGAAAATCATAAGACAATACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR GCA 90 bp ACAGGATTCCAAGTTATCTTCAGGAGGTGCTATTTGGGGTTCTTCATGAGAATTATTCCTCTCTTGACATaGCCAGCTTTTCTCCATAAA +
Preference number: 2 (lower is better)
Translates to: TGFQVIFRRCYLGFFMRIIPLLT*PAFLHK
Trigger: TTTATGGAGAAAAGCTGGGCATGTCAAGAGAGGAAT...AATTCTCATGAAGAACCCCAAATAGCACCTCCTGAAGATAACTTGGAATCCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CCA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTCTTATGGCTATTGGCTaGCCAATTGCTCTCATATTA +
Preference number: 2 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPLMAIG*PIALIL
Trigger: TAATATGAGAGCAATTGGCCAGCCAATAGCCATAAG...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR CCA 90 bp TGTCTTTATACACCTCAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAAAGGTTCTGTAGACTaGAGTTTCTTCCGACACCAT +
Preference number: 2 (lower is better)
Translates to: CLYTPQAYAYLIGGGLGNKGSVD*SFFRHH
Trigger: ATGGTGTCGGAAGAAACTCCAGTCTACAGAACCTTT...ATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTGAGGTGTATAAAGACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR CCA 90 bp ATTGACAATAATGACACCAGTCGAACCTTCCATTTTTGTTTCAGGGGTAGAAGATTTTTGGTGTGCTGCTaGAAGGAAGACACTAACTTG +
Preference number: 2 (lower is better)
Translates to: IDNNDTSRTFHFCFRGRRFLVCC*KEDTNL
Trigger: CAAGTTAGTGTCTTCCTTCCAGCAGCACACCAAAAA...TCTTCTACCCCTGAAACAAAAATGGAAGGTTCGACTGGTGTCATTATTGTCAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
3UTR CAA 90 bp GAGCCTTCTGAAAATGGAGCCTTATCCACTGATGAGATATATTGCTaGTCCTGTAATTTAGCAGATGGAAGCTCATTTCCCTTATTATCT +
Preference number: 2 (lower is better)
Translates to: EPSENGALSTDEIYC*SCNLADGSSFPLLS
Trigger: AGATAATAAGGGAAATGAGCTTCCATCTGCTAAATTACAGGACAAGCAATATATCTCATCAGTGGATAAGGCTCCATTTTCAGAAGGCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR GCA 90 bp GAATATCCAAGGTCCAGCAGTCAACTAAACTTTCTATATAGCTCATCCCAGAAATATTGGCTGGCCAATTaGTCTCATATTATCAGGTGT +
Preference number: 2 (lower is better)
Translates to: EYPRSSSQLNFLYSSSQKYWLAN*SHIIRC
Trigger: ACACCTGATAATATGAGAGCAATTGGCCAGCCAATA...TTTCTGGGATGAGCTATATAGAAAGTTTAGTTGACTGCTGGACCTTGGATATTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR GCA 90 bp CTTGTTGCTAGGAGATCTACAGTTTGGATTGACAATAATGACACCAGTCGAACCCTCTGTGTACTCCCTTaGTTATGTGTTTTATTTCTA +
Preference number: 2 (lower is better)
Translates to: LVARRSTVWIDNNDTSRTLCVLP*LCVLFL
Trigger: TAGAAATAAAACACATAAGCAAGGGAGTACACAGAG...GGTTCGACTGGTGTCATTATTGTCAATCCAAACTGTAGATCTCCTAGCAACAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CCA 90 bp GAATATCCAAGGTCCAGCAGTCAACTAAACTTTCTATATAGCTCATCCCAGAAACTTATGGCTATTGGCTaGCCAATTGCTCTCATATTA +
Preference number: 2 (lower is better)
Translates to: EYPRSSSQLNFLYSSSQKLMAIG*PIALIL
Trigger: TAATATGAGAGCAATTGGCCAGCCAATAGCCATAAG...TTTCTGGGATGAGCTATATAGAAAGTTTAGTTGACTGCTGGACCTTGGATATTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR CCA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTGGTGGCCAAAATATATaGAATGTAGCTCAAATACTC +
Preference number: 2 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPGGQNI*NVAQIL
Trigger: GAGTATTTGAGCTACATTCCATATATTTTGGCCACC...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR CCA 90 bp GAATATCCAAGGTCCAGCAGTCAACTAAACTTTCTATATAGCTCATCCCAGAAAAAACTAAGGATCCACTaGAACTTATGCTGCTTTCCT +
Preference number: 2 (lower is better)
Translates to: EYPRSSSQLNFLYSSSQKKLRIH*NLCCFP
Trigger: AGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTT...TTTCTGGGATGAGCTATATAGAAAGTTTAGTTGACTGCTGGACCTTGGATATTC
39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR CCA 90 bp TGTCTTTATACACCTCAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAAACTAAGGATCCACTaGAACTTATGCTGCTTTCCT +
Preference number: 2 (lower is better)
Translates to: CLYTPQAYAYLIGGGLGNKLRIH*NLCCFP
Trigger: AGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTT...ATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTGAGGTGTATAAAGACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR CCA 90 bp ACAATGAAGGAACTGATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCTGGTTTTCAATTTGCTaGTGTAGACAGTATCTGACA +
Preference number: 2 (lower is better)
Translates to: TMKELIMSSVSHQPQLYLWFSIC*CRQYLT
Trigger: TGTCAGATACTGTCTACACCAGCAAATTGAAAACCA...GAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTATCAGTTCCTTCATTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR CAA 90 bp AAGGAAGCAAACGTATGTTTATTTATTAATGCCCTCAAGTTAGTGTaGACAAGAATAGATCCTGGGGTTTCTATGTCAATGTCCTCAGCT +
Preference number: 2 (lower is better)
Translates to: KEANVCLFINALKLV*TRIDPGVSMSMSSA
Trigger: AGCTGAGGACATTGACATAGAAACCCCAGGATCTATTCTTGTCAACACTAACTTGAGGGCATTAATAAATAAACATACGTTTGCTTCCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593195.6
3UTR-3UTR CCA 90 bp AATATATGGAATGTAGCTCAAATACTCAACACGCAGACTTTACTGGATGCACACACTTTTAAAAAGATATaGCCAACCTCTGCAAGGTCT +
Preference number: 2 (lower is better)
Translates to: NIWNVAQILNTQTLLDAHTFKKI*PTSARS
Trigger: AGACCTTGCAGAGGTTGGCCATATCTTTTTAAAAGT...GTGTGCATCCAGTAAAGTCTGCGTGTTGAGTATTTGAGCTACATTCCATATATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR CCA 90 bp TGTCTTTATACACCTCAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATTGGTTTTCAATTTGCTaGTGTAGACAGTATCTGACA +
Preference number: 2 (lower is better)
Translates to: CLYTPQAYAYLIGGGLGNWFSIC*CRQYLT
Trigger: TGTCAGATACTGTCTACACCAGCAAATTGAAAACCA...ATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTGAGGTGTATAAAGACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR CAA 90 bp TCAAAACATACAGAAGGACACTTTTTCTTATTCCCAATAAGCAACTaGCAGGCAGTATTCAACAATGAAGGAACTGATAATGAGCTCAGT +
Preference number: 2 (lower is better)
Translates to: SKHTEGHFFLFPISN*QAVFNNEGTDNELS
Trigger: ACTGAGCTCATTATCAGTTCCTTCATTGTTGAATACTGCCTGCAAGTTGCTTATTGGGAATAAGAAAAAGTGTCCTTCTGTATGTTTTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR GCA 90 bp ATATCCTCTGACTCCAATTCTGCCATTATATCTTTAGGTGGAATTTCTACCATATCCTTCTCAATTTCTTaGCTTATCCGCAACTGCATT +
Preference number: 2 (lower is better)
Translates to: ISSDSNSAIISLGGISTISFSIS*LIRNCI
Trigger: AATGCAGTTGCGGATAAGGCAAGAAATTGAGAAGGA...TATGGTAGAAATTCCACCTAAAGATATAATGGCAGAATTGGAGTCAGAGGATAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR CCA 72 bp GCAGCAGCCACAGCAGCAGCTGCAGCAGCCTCTCGCTaGGCCCGAGCTTGTTGGGCCCGGGCCTTGATATCT +
Preference number: 3 (lower is better)
Translates to: AAATAAAAAASR*ARACWARALIS
Trigger: AGATATCAAGGCCCGGGCCCAACAAGCTCGGGCCCAGCGAGAGGCTGCTGCAGCTGCTGCTGTGGCTGCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR GCA 72 bp CACCCTCTCCTGGACTTCCCATGGCTCCAGAGACAATaGTCGCTGCAGCAGCCACAGCAGCAGCTGCAGCAG +
Preference number: 3 (lower is better)
Translates to: HPLLDFPWLQRQ*SLQQPQQQLQQ
Trigger: CTGCTGCAGCTGCTGCTGTGGCTGCTGCAGCGAGCATTGTCTCTGGAGCCATGGGAAGTCCAGGAGAGGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CAA 90 bp CAATGCTCGCTGCAGCAGCCACAGCAGCAGCTGCAGCAGCCTCTCGCTGGGCCCGACCCTGTTTTTATTTaGGGGGTACTGGTCTCTACT +
Preference number: 3 (lower is better)
Translates to: QCSLQQPQQQLQQPLAGPDPVFI*GVLVST
Trigger: AGTAGAGACCAGTACCCCCAAAATAAAAACAGGGTC...GGGCCCAGCGAGAGGCTGCTGCAGCTGCTGCTGTGGCTGCTGCAGCGAGCATTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CAA 90 bp ACAATGCTCGCTGCAGCAGCCACAGCAGCAGCTGCAGCAGCCTCTCGCTGGGCCAAGCAAGTTCTGGAATaGAAGCAGGGTAGGGCTTCT +
Preference number: 3 (lower is better)
Translates to: TMLAAAATAAAAAASRWAKQVLE*KQGRAS
Trigger: AGAAGCCCTACCCTGCTTCAATTCCAGAACTTGCTT...GGCCCAGCGAGAGGCTGCTGCAGCTGCTGCTGTGGCTGCTGCAGCGAGCATTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CAA 90 bp GGAAGTTTACTTGGGTTAAGAGACTGCTGTAGTACAGTGGTGGTCTCCCGGAGGCTGGGCCCGAGCTTGTaGGGCCCGGGCCTTGATATC +
Preference number: 3 (lower is better)
Translates to: GSLLGLRDCCSTVVVSRRLGPSL*GPGLDI
Trigger: GATATCAAGGCCCGGGCCCAACAAGCTCGGGCCCAG...CCTCCGGGAGACCACCACTGTACTACAGCAGTCTCTTAACCCAAGTAAACTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR GCA 72 bp TCTCTGGGAACGCAGATGGACAGTGACTCTGGGCTCTaGATGCTCAGGGGGTCATTCCCACTAGGCAGCTAC +
Preference number: 3 (lower is better)
Translates to: SLGTQMDSDSGL*MLRGSFPLGSY
Trigger: GTAGCTGCCTAGTGGGAATGACCCCCTGAGCATGCAGAGCCCAGAGTCACTGTCCATCTGCGTTCCCAGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR CCA 72 bp CCCTCCTGGAGAAGGCAGGCTGGTACAGGCTCCCTCTaGGCTCTCAGAAGAAAAGGACGTTTCAGAGATGCA +
Preference number: 3 (lower is better)
Translates to: PSWRRQAGTGSL*ALRRKGRFRDA
Trigger: TGCATCTCTGAAACGTCCTTTTCTTCTGAGAGCCCAGAGGGAGCCTGTACCAGCCTGCCTTCTCCAGGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR CCA 72 bp ATGTGGACTGTGTTTCCCCTCCTGGAGAAGGCAGGCTaGTACAGGCTCCCTCTGGGCTCTCAGAAGAAAAGG +
Preference number: 3 (lower is better)
Translates to: MWTVFPLLEKAG*YRLPLGSQKKR
Trigger: CCTTTTCTTCTGAGAGCCCAGAGGGAGCCTGTACCAGCCTGCCTTCTCCAGGAGGGGAAACACAGTCCACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CAA 90 bp CCTTCCTTTGAGCTGAGCGGAGGAGGCAACCGGGTCTCTTTAGAGGTCTGGAAGCTTCTCCATGGGCATTaGCCTCGGCCATATCTGTAC +
Preference number: 3 (lower is better)
Translates to: PSFELSGGGNRVSLEVWKLLHGH*PRPYLY
Trigger: GTACAGATATGGCCGAGGCAAATGCCCATGGAGAAG...CTTCCAGACCTCTAAAGAGACCCGGTTGCCTCCTCCGCTCAGCTCAAAGGAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CAA 90 bp AGGGGGAACCCTTGGTTCCTCTCTGGGAGGCTGTTCTTTCTCAGGTGGGCTGCTCCTCAGAACAAAATGTaGTCTCAAGGGAGGCTGGAG +
Preference number: 3 (lower is better)
Translates to: RGNPWFLSGRLFFLRWAAPQNKM*SQGRLE
Trigger: CTCCAGCCTCCCTTGAGACAACATTTTGTTCTGAGG...AGCAGCCCACCTGAGAAAGAACAGCCTCCCAGAGAGGAACCAAGGGTTCCCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR GCA 72 bp CCCAGAGGTTTGGCAGTGGCGGAAGACTCATCTTTCTaGGGGGAGAGTGGCTCTTCAGATACAGAAGGTGAC +
Preference number: 3 (lower is better)
Translates to: PRGLAVAEDSSF*GESGSSDTEGD
Trigger: GTCACCTTCTGTATCTGAAGAGCCACTCTCCCCGCAGAAAGATGAGTCTTCCGCCACTGCCAAACCTCTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CAA 90 bp AGGGGGAACCCTTGGTTCCTCTCTGGGAGGCTGTTCTTTCTCAGGTGGGCTGCTTCGCTGTTTCCACCCTaGTGCTGCATATGCAAAGAA +
Preference number: 3 (lower is better)
Translates to: RGNPWFLSGRLFFLRWAASLFPP*CCICKE
Trigger: TTCTTTGCATATGCAGCACAAGGGTGGAAACAGCGA...AGCAGCCCACCTGAGAAAGAACAGCCTCCCAGAGAGGAACCAAGGGTTCCCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR GCA 72 bp TGTGTTCCTCCCGCCACTGACAGATGTGCTAGTGGATaGTCGAGACTCAGGTTTGGAGACTGGTTGGCTCTT +
Preference number: 3 (lower is better)
Translates to: CVPPATDRCASG*SRLRFGDWLAL
Trigger: AAGAGCCAACCAGTCTCCAAACCTGAGTCTCGAGCATCCACTAGCACATCTGTCAGTGGCGGGAGGAACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CAA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTGTTGACGCTTTAGCCTaGGGTAGTCCCTTTTATCAT +
Preference number: 3 (lower is better)
Translates to: CAGPHHRTDDATLGLASAVDALA*GSPFYH
Trigger: ATGATAAAAGGGACTACCCAAGGCTAAAGCGTCAAC...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR CAA 90 bp GCCAGAGTTCTCGTCTTTCCACCCTCTCCTGGACTTCCCATGGCTCCAGAGACAGAGGGCTCTGATGACTaGGAAGTATGTGAGGTTTCT +
Preference number: 3 (lower is better)
Translates to: ARVLVFPPSPGLPMAPETEGSDD*EVCEVS
Trigger: AGAAACCTCACATACTTCCAAGTCATCAGAGCCCTC...TGTCTCTGGAGCCATGGGAAGTCCAGGAGAGGGTGGAAAGACGAGAACTCTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR TCA 72 bp GACAGGCTAATGGAGAGGTTCCATTTCCGGAAGGAATaGACGGAACCACTCCAATGCAATCCCAGCCACTCC +
Preference number: 3 (lower is better)
Translates to: DRLMERFHFRKE*TEPLQCNPSHS
Trigger: GGAGTGGCTGGGATTGCATTGGAGTGGTTCCGTTCATTCCTTCCGGAAATGGAACCTCTCCATTAGCCTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
3UTR GCA 72 bp GTGGCAGTTTCTGGAAGTTTACTTGGGTTAAGAGACTaGTGTAGTACAGTGGTGGTCTCCCGGAGGTGGGCA +
Preference number: 3 (lower is better)
Translates to: VAVSGSLLGLRD*CSTVVVSRRWA
Trigger: TGCCCACCTCCGGGAGACCACCACTGTACTACAGCAGTCTCTTAACCCAAGTAAACTTCCAGAAACTGCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR CCA 72 bp AGAGACTGCTGTAGTACAGTGGTGGTCTCCCGGAGGTaGGCAGACTTGTTGCTAGGAGATCTACAGTTTGGA +
Preference number: 3 (lower is better)
Translates to: RDCCSTVVVSRR*ADLLLGDLQFG
Trigger: TCCAAACTGTAGATCTCCTAGCAACAAGTCTGCCCACCTCCGGGAGACCACCACTGTACTACAGCAGTCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CAA 90 bp GTTCCTCCCGCCACTGACAGATGTGCTAGTGGATGCTCGAGACTCAGGTTTGGATCGCTGTTTCCACCCTaGTGCTGCATATGCAAAGAA +
Preference number: 3 (lower is better)
Translates to: VPPATDRCASGCSRLRFGSLFPP*CCICKE
Trigger: TTCTTTGCATATGCAGCACAAGGGTGGAAACAGCGA...TCCAAACCTGAGTCTCGAGCATCCACTAGCACATCTGTCAGTGGCGGGAGGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CAA 90 bp CTCCTGGACTTCCCATGGCTCCAGAGACAATGCTCGCTGCAGCAGCCACAGCAGCAGGTGAAGTGGATATaGGAGATATTTCTGACATCA +
Preference number: 3 (lower is better)
Translates to: LLDFPWLQRQCSLQQPQQQVKWI*EIFLTS
Trigger: TGATGTCAGAAATATCTCCAATATCCACTTCACCTG...CTGCTGTGGCTGCTGCAGCGAGCATTGTCTCTGGAGCCATGGGAAGTCCAGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CAA 90 bp CTTGTTGCTAGGAGATCTACAGTTTGGATTGACAATAATGACACCAGTCGAACCCTGGGCCCGAGCTTGTaGGGCCCGGGCCTTGATATC +
Preference number: 3 (lower is better)
Translates to: LVARRSTVWIDNNDTSRTLGPSL*GPGLDI
Trigger: GATATCAAGGCCCGGGCCCAACAAGCTCGGGCCCAG...GGTTCGACTGGTGTCATTATTGTCAATCCAAACTGTAGATCTCCTAGCAACAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CAA 90 bp GGAAGTTTACTTGGGTTAAGAGACTGCTGTAGTACAGTGGTGGTCTCCCGGAGGCATGCTTTTTGGCTGTaGTTCTGCCAAGGCTGTCTG +
Preference number: 3 (lower is better)
Translates to: GSLLGLRDCCSTVVVSRRHAFWL*FCQGCL
Trigger: CAGACAGCCTTGGCAGAACAACAGCCAAAAAGCATG...CCTCCGGGAGACCACCACTGTACTACAGCAGTCTCTTAACCCAAGTAAACTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR CCA 72 bp GATGCTACCCTAGGCTTGGCTTCAGCTTCTAAAACCTaGGACTTCATTACACCACGGAGGAACTGGGAAACC +
Preference number: 3 (lower is better)
Translates to: DATLGLASASKT*DFITPRRNWET
Trigger: GGTTTCCCAGTTCCTCCGTGGTGTAATGAAGTCCCAGGTTTTAGAAGCTGAAGCCAAGCCTAGGGTAGCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR CAA 90 bp GGCTGGTACAGGCTCCCTCTGGGCTCTCAGAAGAAAAGGACGTTTCAGAGATGCAAGGAAGACACTAACTaGCTTTGCACTGCTGTGTTA +
Preference number: 3 (lower is better)
Translates to: GWYRLPLGSQKKRTFQRCKEDTN*LCTAVL
Trigger: TAACACAGCAGTGCAAAGCAAGTTAGTGTCTTCCTT...GCATCTCTGAAACGTCCTTTTCTTCTGAGAGCCCAGAGGGAGCCTGTACCAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CAA 90 bp GACAGATGTGCTAGTGGATGCTCGAGACTCAGGTTTGGAGACTGGTTGGCTCTTGCCCTCAAGTTAGTGTaGACAAGAATAGATCCTGGG +
Preference number: 3 (lower is better)
Translates to: DRCASGCSRLRFGDWLALALKLV*TRIDPG
Trigger: CCCAGGATCTATTCTTGTCAACACTAACTTGAGGGC...AAGAGCCAACCAGTCTCCAAACCTGAGTCTCGAGCATCCACTAGCACATCTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593195.6
3UTR-3UTR CAA 90 bp GGCTGGTACAGGCTCCCTCTGGGCTCTCAGAAGAAAAGGACGTTTCAGAGATGCTTCCTTCTCAATTTCTaGCCTTATCCGCAACTGCAT +
Preference number: 3 (lower is better)
Translates to: GWYRLPLGSQKKRTFQRCFLLNF*PYPQLH
Trigger: ATGCAGTTGCGGATAAGGCAAGAAATTGAGAAGGAA...GCATCTCTGAAACGTCCTTTTCTTCTGAGAGCCCAGAGGGAGCCTGTACCAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CAA 90 bp CTGATGACTTGGAAGTATGTGAGGTTTCTAACCGACTCTGTGTACTCCCTTGCTTTCTCTCCCAGAGGTTaGGCAGTGGCGGAAGACTCA +
Preference number: 3 (lower is better)
Translates to: LMTWKYVRFLTDSVYSLAFSPRG*AVAEDS
Trigger: TGAGTCTTCCGCCACTGCCAAACCTCTGGGAGAGAA...AGCAAGGGAGTACACAGAGTCGGTTAGAAACCTCACATACTTCCAAGTCATCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR TCA 72 bp ACTGGAAGGCCAGAAGTCCCACATGAAGAACTACTTTaGGCTCCAGCGTTGTTTGGTCCAGTAGTGAGCTTC +
Preference number: 3 (lower is better)
Translates to: TGRPEVPHEELL*APALFGPVVSF
Trigger: GAAGCTCACTACTGGACCAAACAACGCTGGAGCTCAAAGTAGTTCTTCATGTGGGACTTCTGGCCTTCCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR TCA 72 bp TGTCTGTGCAGAAACTGGAAGGCCAGAAGTCCCACATaGAGAACTACTTTGAGCTCCAGCGTTGTTTGGTCC +
Preference number: 3 (lower is better)
Translates to: CLCRNWKARSPT*RTTLSSSVVWS
Trigger: GGACCAAACAACGCTGGAGCTCAAAGTAGTTCTTCATGTGGGACTTCTGGCCTTCCAGTTTCTGCACAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR CCA 72 bp ACCTGGCAGGCAGTGAAGAGAAAACTAAGGATCCACTaGAACTTATGCTGCTTTCCTCGGGTAAGGCTGGTT +
Preference number: 3 (lower is better)
Translates to: TWQAVKRKLRIH*NLCCFPRVRLV
Trigger: AACCAGCCTTACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGCCTGCCAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR CCA 72 bp AGAGTTCCTGTTCTAGGACTCTTCACAATTGTTCTCTaGGAACGCAGATGGACAGTGACTCTGGGCTCTGCA +
Preference number: 3 (lower is better)
Translates to: RVPVLGLFTIVL*ERRWTVTLGSA
Trigger: TGCAGAGCCCAGAGTCACTGTCCATCTGCGTTCCCAGAGAACAATTGTGAAGAGTCCTAGAACAGGAACTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR CCA 72 bp ATGATGGGTTCGGGAGTATTAGACAGATTCTTCTGCTaGGAGGTAAGGTTCTCTCCCAGAGGTTTGGCAGTG +
Preference number: 3 (lower is better)
Translates to: MMGSGVLDRFFC*EVRFSPRGLAV
Trigger: CACTGCCAAACCTCTGGGAGAGAACCTTACCTCCCAGCAGAAGAATCTGTCTAATACTCCCGAACCCATCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CAA 90 bp GATGACTTGGAAGTATGTGAGGTTTCTAACCGACTCTGTGTACTCCCTTGCTTATTCTCTCCCAGAGGTTaGGCAGTGGCGGAAGACTCA +
Preference number: 3 (lower is better)
Translates to: DDLEVCEVSNRLCVLPCLFSPRG*AVAEDS
Trigger: TGAGTCTTCCGCCACTGCCAAACCTCTGGGAGAGAA...TAAGCAAGGGAGTACACAGAGTCGGTTAGAAACCTCACATACTTCCAAGTCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CAA 90 bp GCAGTTTCTGGAAGTTTACTTGGGTTAAGAGACTGCTGTAGTACAGTGGTGGTCATCCCATCAGGTGACTaGGAGGGCTCTGATGACTTG +
Preference number: 3 (lower is better)
Translates to: AVSGSLLGLRDCCSTVVVIPSGD*EGSDDL
Trigger: CAAGTCATCAGAGCCCTCCAAGTCACCTGATGGGAT...GACCACCACTGTACTACAGCAGTCTCTTAACCCAAGTAAACTTCCAGAAACTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR CCA 72 bp TACCATAGGGCAAAGAGTAGCACAGAAACCAGGCTCTaGAGAAGCTGGGCTTTTCATGCTTTTTGGCTGTTG +
Preference number: 3 (lower is better)
Translates to: YHRAKSSTETRL*RSWAFHAFWLL
Trigger: CAACAGCCAAAAAGCATGAAAAGCCCAGCTTCTCCAGAGCCTGGTTTCTGTGCTACTCTTTGCCCTATGGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CAA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACAAGGCCTAGAACCAGATaGCTGGGCATGAGTCCCATG +
Preference number: 3 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTRPRTR*LGMSPM
Trigger: CATGGGACTCATGCCCAGCAATCTGGTTCTAGGCCT...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR CAA 90 bp TCTTTAGGTGGAATTTCTACCATAGGGCAAAGAGTAGCACAGAAACCAGGCTCTCTTCTCCATGGGCATTaGCCTCGGCCATATCTGTAC +
Preference number: 3 (lower is better)
Translates to: SLGGISTIGQRVAQKPGSLLHGH*PRPYLY
Trigger: GTACAGATATGGCCGAGGCAAATGCCCATGGAGAAG...AGAGCCTGGTTTCTGTGCTACTCTTTGCCCTATGGTAGAAATTCCACCTAAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CAA 90 bp CGGAGGTGGGCAGACTTGTTGCTAGGAGATCTACAGTTTGGATTGACAATAATGGCCTTTGTCTGCTCTTaGATGTGTGCCAGAGTTCTC +
Preference number: 3 (lower is better)
Translates to: RRWADLLLGDLQFGLTIMAFVCS*MCARVL
Trigger: GAGAACTCTGGCACACATCAAAGAGCAGACAAAGGC...CATTATTGTCAATCCAAACTGTAGATCTCCTAGCAACAAGTCTGCCCACCTCCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CAA 90 bp ACAATGAAGGAACTGATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCAGGCCTAGAACCAGATaGCTGGGCATGAGTCCCATG +
Preference number: 3 (lower is better)
Translates to: TMKELIMSSVSHQPQLYLRPRTR*LGMSPM
Trigger: CATGGGACTCATGCCCAGCAATCTGGTTCTAGGCCT...GAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTATCAGTTCCTTCATTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR CAA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTCTGGGCTTATGGCTATaGGCTGGCCAATTGCTCTCA +
Preference number: 3 (lower is better)
Translates to: FKKIWPTSARSEARMNGCLGLWL*AGQLLS
Trigger: TGAGAGCAATTGGCCAGCCAATAGCCATAAGCCCAG...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR CAA 90 bp GGCGAATCCGACTGCTCATCAGACACCTTTAATGGTGTCAAAACAACACGAGGAGACTTTCCAGGGATTTaGAAGAATGTTCCATCCCCT +
Preference number: 3 (lower is better)
Translates to: GESDCSSDTFNGVKTTRGDFPGI*KNVPSP
Trigger: AGGGGATGGAACATTCTTCAAAATCCCTGGAAAGTC...TCCTCGTGTTGTTTTGACACCATTAAAGGTGTCTGATGAGCAGTCGGATTCGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CAA 90 bp TATGATGGGTTCGGGAGTATTAGACAGATTCTTCTGCTGGGAGGTAAGGTTCTCGGCTTTTCATGCTTTTaGGCTGTTGTTCTGCCAAGG +
Preference number: 3 (lower is better)
Translates to: YDGFGSIRQILLLGGKVLGFSCF*AVVLPR
Trigger: CCTTGGCAGAACAACAGCCAAAAAGCATGAAAAGCC...GAGAACCTTACCTCCCAGCAGAAGAATCTGTCTAATACTCCCGAACCCATCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CAA 90 bp TACAGTGGTGGTCTCCCGGAGGTGGGCAGACTTGTTGCTAGGAGATCTACAGTTGATGTTAATGGTAAGTaGGACATAAGAGATGCTTCT +
Preference number: 3 (lower is better)
Translates to: YSGGLPEVGRLVARRSTVDVNGK*DIRDAS
Trigger: AGAAGCATCTCTTATGTCCAACTTACCATTAACATC...AACTGTAGATCTCCTAGCAACAAGTCTGCCCACCTCCGGGAGACCACCACTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CAA 90 bp CTTTGTCTGCTCTTTGATGTGTGCCAGAGTTCTCGTCTTTCCACCCTCTCCTGGGATGTTAAAGGTAAGTaGGATACTGGTGATGCTTCA +
Preference number: 3 (lower is better)
Translates to: LCLLFDVCQSSRLSTLSWDVKGK*DTGDAS
Trigger: TGAAGCATCACCAGTATCCAACTTACCTTTAACATC...CCAGGAGAGGGTGGAAAGACGAGAACTCTGGCACACATCAAAGAGCAGACAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CAA 90 bp GCTAGTGGATGCTCGAGACTCAGGTTTGGAGACTGGTTGGCTCTTGATTATAAAGAGGGCTCTGATGACTaGGAAGTATGTGAGGTTTCT +
Preference number: 3 (lower is better)
Translates to: ASGCSRLRFGDWLALDYKEGSDD*EVCEVS
Trigger: AGAAACCTCACATACTTCCAAGTCATCAGAGCCCTC...TTTATAATCAAGAGCCAACCAGTCTCCAAACCTGAGTCTCGAGCATCCACTAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CAA 90 bp GCAGTTTCTGGAAGTTTACTTGGGTTAAGAGACTGCTGTAGTACAGTGGTGGTCGAGACTGGTTGGCTCTaGATTATAAAAGGTGGCCCA +
Preference number: 3 (lower is better)
Translates to: AVSGSLLGLRDCCSTVVVETGWL*IIKGGP
Trigger: TGGGCCACCTTTTATAATCAAGAGCCAACCAGTCTC...GACCACCACTGTACTACAGCAGTCTCTTAACCCAAGTAAACTTCCAGAAACTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR GCA 72 bp TTGGTGTGCTGCTGGAAGGAAGACACTAACTTGCTTTaGACTGCTGTGTTAGTAAGGCTTGAATCTCGAGTG +
Preference number: 3 (lower is better)
Translates to: LVCCWKEDTNLL*TAVLVRLESRV
Trigger: CACTCGAGATTCAAGCCTTACTAACACAGCAGTGCAAAGCAAGTTAGTGTCTTCCTTCCAGCAGCACACCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
3UTR GCA 72 bp TGCTGCCTCAAAGCCTGTTTAAGAGCCTTTTTGGTGTaGTGCTGGAAGGAAGACACTAACTTGCTTTGCACT +
Preference number: 3 (lower is better)
Translates to: CCLKACLRAFLV*CWKEDTNLLCT
Trigger: AGTGCAAAGCAAGTTAGTGTCTTCCTTCCAGCAGCACACCAAAAAGGCTCTTAAACAGGCTTTGAGGCAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
3UTR CCA 72 bp CTCAAAGCCTGTTTAAGAGCCTTTTTGGTGTGCTGCTaGAAGGAAGACACTAACTTGCTTTGCACTGCTGTG +
Preference number: 3 (lower is better)
Translates to: LKACLRAFLVCC*KEDTNLLCTAV
Trigger: CACAGCAGTGCAAAGCAAGTTAGTGTCTTCCTTCCAGCAGCACACCAAAAAGGCTCTTAAACAGGCTTTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CAA 90 bp ACAATGAAGGAACTGATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCCTGGGCTTATGGCTATaGGCTGGCCAATTGCTCTCA +
Preference number: 3 (lower is better)
Translates to: TMKELIMSSVSHQPQLYLLGLWL*AGQLLS
Trigger: TGAGAGCAATTGGCCAGCCAATAGCCATAAGCCCAG...GAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTATCAGTTCCTTCATTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR CAA 90 bp GCTAGTGGATGCTCGAGACTCAGGTTTGGAGACTGGTTGGCTCTTGATTATAAAGACTTTCCAGGGATTTaGAAGAATGTTCCATCCCCT +
Preference number: 3 (lower is better)
Translates to: ASGCSRLRFGDWLALDYKDFPGI*KNVPSP
Trigger: AGGGGATGGAACATTCTTCAAAATCCCTGGAAAGTC...TTTATAATCAAGAGCCAACCAGTCTCCAAACCTGAGTCTCGAGCATCCACTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
3UTR GCA 72 bp GTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTaGTTTCCTCGGGTAAGGCTGGTTAAGTGCATTGCT +
Preference number: 3 (lower is better)
Translates to: VKRKLRIHWNLC*FPRVRLVKCIA
Trigger: AGCAATGCACTTAACCAGCCTTACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR GCA 72 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATaGTGCTTTCCTCGGGTAAGGCTGGTTAAGTGCATT +
Preference number: 3 (lower is better)
Translates to: AVKRKLRIHWNL*CFPRVRLVKCI
Trigger: AATGCACTTAACCAGCCTTACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR CCA 72 bp GAAGCTCTAAAATCCTCTGGGCTTATGGCTATTGGCTaGCCAATTGCTCTCATATTATCAGGTGTCAAAGGC +
Preference number: 3 (lower is better)
Translates to: EALKSSGLMAIG*PIALILSGVKG
Trigger: GCCTTTGACACCTGATAATATGAGAGCAATTGGCCAGCCAATAGCCATAAGCCCAGAGGATTTTAGAGCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR CCA 72 bp GTTACCTGCTTCGAACAAACTCCATTTTCTTCTCCATaGGCATTTGCCTCGGCCATATCTGTACCATCCAAT +
Preference number: 3 (lower is better)
Translates to: VTCFEQTPFSSP*AFASAISVPSN
Trigger: ATTGGATGGTACAGATATGGCCGAGGCAAATGCCCATGGAGAAGAAAATGGAGTTTGTTCGAAGCAGGTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
3UTR CCA 72 bp TGTGCTAGTGGATGCTCGAGACTCAGGTTTGGAGACTaGTTGGCTCTTGATTATAAAAGGTGGCCCAATTTT +
Preference number: 3 (lower is better)
Translates to: CASGCSRLRFGD*LALDYKRWPNF
Trigger: AAAATTGGGCCACCTTTTATAATCAAGAGCCAACCAGTCTCCAAACCTGAGTCTCGAGCATCCACTAGCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CAA 90 bp CTTGTTGCTAGGAGATCTACAGTTTGGATTGACAATAATGACACCAGTCGAACCAAGCAAGTTCTGGAATaGAAGCAGGGTAGGGCTTCT +
Preference number: 3 (lower is better)
Translates to: LVARRSTVWIDNNDTSRTKQVLE*KQGRAS
Trigger: AGAAGCCCTACCCTGCTTCAATTCCAGAACTTGCTT...GGTTCGACTGGTGTCATTATTGTCAATCCAAACTGTAGATCTCCTAGCAACAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR TCA 72 bp TCAGTATCTCATCAGCCTCAATTGTACCTCACATACTaGGTGCAAAGGTTCTGTAGACTGGAGTTTCTTCCG +
Preference number: 3 (lower is better)
Translates to: SVSHQPQLYLTY*VQRFCRLEFLP
Trigger: CGGAAGAAACTCCAGTCTACAGAACCTTTGCACTCAGTATGTGAGGTACAATTGAGGCTGATGAGATACTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR TCA 72 bp GTTTGGTCCAGTAGTGAGCTTCACAGATTCCTCTCTTaGCATGCCCAGCTTTTCTCCATAAAACCTCTCAAA +
Preference number: 3 (lower is better)
Translates to: VWSSSELHRFLS*HAQLFSIKPLK
Trigger: TTTGAGAGGTTTTATGGAGAAAAGCTGGGCATGTCAAGAGAGGAATCTGTGAAGCTCACTACTGGACCAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR GCA 72 bp TATCTCATCAGCCTCAATTGTACCTCACATACTGAGTaGAAAGGTTCTGTAGACTGGAGTTTCTTCCGACAC +
Preference number: 3 (lower is better)
Translates to: YLISLNCTSHTE*KGSVDWSFFRH
Trigger: GTGTCGGAAGAAACTCCAGTCTACAGAACCTTTGCACTCAGTATGTGAGGTACAATTGAGGCTGATGAGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR GCA 72 bp CTTCGAACAAACTCCATTTTCTTCTCCATGGGCATTTaGCTCGGCCATATCTGTACCATCCAATTCAGATTC +
Preference number: 3 (lower is better)
Translates to: LRTNSIFFSMGI*LGHICTIQFRF
Trigger: GAATCTGAATTGGATGGTACAGATATGGCCGAGGCAAATGCCCATGGAGAAGAAAATGGAGTTTGTTCGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
3UTR GCA 72 bp CTTGAATCTCGAGTGGAAGATGCTTCATCAGTTACCTaGTTCGAACAAACTCCATTTTCTTCTCCATGGGCA +
Preference number: 3 (lower is better)
Translates to: LESRVEDASSVT*FEQTPFSSPWA
Trigger: TGCCCATGGAGAAGAAAATGGAGTTTGTTCGAAGCAGGTAACTGATGAAGCATCTTCCACTCGAGATTCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CAA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACACTATTGGCTGGCCAATaGCTCTCATATTATCAGGTG +
Preference number: 3 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTLLAGQ*LSYYQV
Trigger: CACCTGATAATATGAGAGCAATTGGCCAGCCAATAG...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR CAA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTACTTTTGAACTTGCTTTaGAAAACAGAGCCTCCTGAA +
Preference number: 3 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVLLNLL*KTEPPE
Trigger: TTCAGGAGGCTCTGTTTTCAAAAGCAAGTTCAAAAG...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR CAA 90 bp GCTAGTGGATGCTCGAGACTCAGGTTTGGAGACTGGTTGGCTCTTGATTATAAACAGGTGAAGTGGATATaGGAGATATTTCTGACATCA +
Preference number: 3 (lower is better)
Translates to: ASGCSRLRFGDWLALDYKQVKWI*EIFLTS
Trigger: TGATGTCAGAAATATCTCCAATATCCACTTCACCTG...TTTATAATCAAGAGCCAACCAGTCTCCAAACCTGAGTCTCGAGCATCCACTAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR TCA 72 bp CTGGAGTTTCTTCCGACACCATGTCAGTTACTGATGTaGTGGTTTTCAATTTGCTGGTGTAGACAGTATCTG +
Preference number: 3 (lower is better)
Translates to: LEFLPTPCQLLM*WFSICWCRQYL
Trigger: CAGATACTGTCTACACCAGCAAATTGAAAACCATCACATCAGTAACTGACATGGTGTCGGAAGAAACTCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR TCA 72 bp GTAGACTGGAGTTTCTTCCGACACCATGTCAGTTACTaGTGTGATGGTTTTCAATTTGCTGGTGTAGACAGT +
Preference number: 3 (lower is better)
Translates to: VDWSFFRHHVSY*CDGFQFAGVDS
Trigger: ACTGTCTACACCAGCAAATTGAAAACCATCACATCAGTAACTGACATGGTGTCGGAAGAAACTCCAGTCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR TCA 72 bp TTGAAGAATGTTCCATCCCCTATTCGAGTGTTAGTGTaGAGCATTGCATTCAGACAGGCTAATGGAGAGGTT +
Preference number: 3 (lower is better)
Translates to: LKNVPSPIRVLV*SIAFRQANGEV
Trigger: AACCTCTCCATTAGCCTGTCTGAATGCAATGCTTCACACTAACACTCGAATAGGGGATGGAACATTCTTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
3UTR GCA 72 bp AAATTCCATCACTTCCCATCTGAAGGCGAATCCGACTaGTCATCAGACACCTTTAATGGTGTCAAAACAACA +
Preference number: 3 (lower is better)
Translates to: KFHHFPSEGESD*SSDTFNGVKTT
Trigger: TGTTGTTTTGACACCATTAAAGGTGTCTGATGAGCAGTCGGATTCGCCTTCAGATGGGAAGTGATGGAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592541.6
3UTR CCA 72 bp CTTCAGGAGGTGCTATTTGGGGTTCTTCATGAGAATTaGTTAGACTTTCAGCCTCCTCAGAAAATTCAGGTA +
Preference number: 3 (lower is better)
Translates to: LQEVLFGVLHEN*LDFQPPQKIQV
Trigger: TACCTGAATTTTCTGAGGAGGCTGAAAGTCTAACCAATTCTCATGAAGAACCCCAAATAGCACCTCCTGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CAA 90 bp CGGAGGTGGGCAGACTTGTTGCTAGGAGATCTACAGTTTGGATTGACAATAATGGATGTTAATGGTAAGTaGGACATAAGAGATGCTTCT +
Preference number: 3 (lower is better)
Translates to: RRWADLLLGDLQFGLTIMDVNGK*DIRDAS
Trigger: AGAAGCATCTCTTATGTCCAACTTACCATTAACATC...CATTATTGTCAATCCAAACTGTAGATCTCCTAGCAACAAGTCTGCCCACCTCCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR GCA 72 bp CCATTTTTAGATTCAGATCCTGAAGGCGAATCCGACTaGTCATCAGACACCTTTAATGGTGTCAAAACAACA +
Preference number: 3 (lower is better)
Translates to: PFLDSDPEGESD*SSDTFNGVKTT
Trigger: TGTTGTTTTGACACCATTAAAGGTGTCTGATGAGCAGTCGGATTCGCCTTCAGGATCTGAATCTAAAAATGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593195.6
3UTR CCA 72 bp AATCTCTACTTTCATTTCTTATCCCATCAGGTGACTTaGAGGGCTCTGATGACTTGGAAGTATGTGAGGTTT +
Preference number: 3 (lower is better)
Translates to: NLYFHFLSHQVT*RALMTWKYVRF
Trigger: AAACCTCACATACTTCCAAGTCATCAGAGCCCTCCAAGTCACCTGATGGGATAAGAAATGAAAGTAGAGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CAA 90 bp TGTCTTTATACACCTCAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATGTTGACGCTTTAGCCTaGGGTAGTCCCTTTTATCAT +
Preference number: 3 (lower is better)
Translates to: CLYTPQAYAYLIGGGLGNVDALA*GSPFYH
Trigger: ATGATAAAAGGGACTACCCAAGGCTAAAGCGTCAAC...ATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTGAGGTGTATAAAGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR CAA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTGGGCATGGTTGGTTTTaGTTTTCTTTCATCTTCCCT +
Preference number: 3 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPGHGWF*FSFIFP
Trigger: AGGGAAGATGAAAGAAAACAAAAACCAACCATGCCC...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR CAA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACATCCCATGTGAAAATATaGGTCATTCTTACCCTGGAT +
Preference number: 3 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTSHVKI*VILTLD
Trigger: ATCCAGGGTAAGAATGACCAATATTTTCACATGGGA...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR CAA 90 bp ACAATGAAGGAACTGATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCGGCTGGTTAAGTGCATaGCTAACTAACTTTCTCAGT +
Preference number: 3 (lower is better)
Translates to: TMKELIMSSVSHQPQLYLGWLSA*LTNFLS
Trigger: ACTGAGAAAGTTAGTTAGCAATGCACTTAACCAGCC...GAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTATCAGTTCCTTCATTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR CAA 90 bp TGTCTTATGATTTTCATCCTGGCATTCACAGATACTAGTCTCTACCTCTTCTGCACACGAGGAACAGTCTaGTTTACCATCATTGAGACT +
Preference number: 3 (lower is better)
Translates to: CLMIFILAFTDTSLYLFCTRGTV*FTIIET
Trigger: AGTCTCAATGATGGTAAACAAGACTGTTCCTCGTGT...GCAGAAGAGGTAGAGACTAGTATCTGTGAATGCCAGGATGAAAATCATAAGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CAA 90 bp GGATTGACAATAATGACACCAGTCGAACCTTCCATTTTTGTTTCAGGGGTAGAATTCAGGAGGTGCTATTaGGGGTTCTTCATGAGAATT +
Preference number: 3 (lower is better)
Translates to: GLTIMTPVEPSIFVSGVEFRRCY*GFFMRI
Trigger: AATTCTCATGAAGAACCCCAAATAGCACCTCCTGAA...TTCTACCCCTGAAACAAAAATGGAAGGTTCGACTGGTGTCATTATTGTCAATCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CAA 90 bp CTTGTTGCTAGGAGATCTACAGTTTGGATTGACAATAATGACACCAGTCGAACCGATGTTAAAGGTAAGTaGGATACTGGTGATGCTTCA +
Preference number: 3 (lower is better)
Translates to: LVARRSTVWIDNNDTSRTDVKGK*DTGDAS
Trigger: TGAAGCATCACCAGTATCCAACTTACCTTTAACATC...GGTTCGACTGGTGTCATTATTGTCAATCCAAACTGTAGATCTCCTAGCAACAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CAA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTGCATTATTCTATTTGTaGTTGCTGATGCTATTTGGC +
Preference number: 3 (lower is better)
Translates to: FKKIWPTSARSEARMNGCALFYL*LLMLFG
Trigger: GCCAAATAGCATCAGCAACAACAAATAGAATAATGC...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR CAA 90 bp ACAATGAAGGAACTGATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCAAATGGGGCATTGACTaGTATACACATGGACAGATA +
Preference number: 3 (lower is better)
Translates to: TMKELIMSSVSHQPQLYLKWGID*YTHGQI
Trigger: TATCTGTCCATGTGTATACAAGTCAATGCCCCATTT...GAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTATCAGTTCCTTCATTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR CAA 90 bp TGCATAACCACTTTAACTCATTCCTCTCATTCTCCTTACACATCTGCATTTCCGAACAAAAATGGGGCATaGACTTGTATACACATGGAC +
Preference number: 3 (lower is better)
Translates to: CITTLTHSSHSPYTSAFPNKNGA*TCIHMD
Trigger: GTCCATGTGTATACAAGTCAATGCCCCATTTTTGTT...CGGAAATGCAGATGTGTAAGGAGAATGAGAGGAATGAGTTAAAGTGGTTATGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR CAA 90 bp TGTCTTTATACACCTCAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATGGGCATGGTTGGTTTTaGTTTTCTTTCATCTTCCCT +
Preference number: 3 (lower is better)
Translates to: CLYTPQAYAYLIGGGLGNGHGWF*FSFIFP
Trigger: AGGGAAGATGAAAGAAAACAAAAACCAACCATGCCC...ATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTGAGGTGTATAAAGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR CAA 90 bp GCTCATCAGACACCTTTAATGGTGTCAAAACAACACGAGGAACAGTCTTGTTTAAATCATCATGGAAAGTaGTCCCAAATCCTTCATTGG +
Preference number: 3 (lower is better)
Translates to: AHQTPLMVSKQHEEQSCLNHHGK*SQILHW
Trigger: CCAATGAAGGATTTGGGACAACTTTCCATGATGATT...TAAACAAGACTGTTCCTCGTGTTGTTTTGACACCATTAAAGGTGTCTGATGAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593195.6
3UTR TCA 72 bp AAGTTATCTTCAGGAGGTGCTATTTGGGGTTCTTCATaGGAATTGGTTAGACTTTCAGCCTCCTCAGAAAAT +
Preference number: 3 (lower is better)
Translates to: KLSSGGAIWGSS*ELVRLSASSEN
Trigger: ATTTTCTGAGGAGGCTGAAAGTCTAACCAATTCTCATGAAGAACCCCAAATAGCACCTCCTGAAGATAACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CAA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTGCATTATTCTATTTGTaGTTGCTGATGCTATTTGGC +
Preference number: 3 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPALFYL*LLMLFG
Trigger: GCCAAATAGCATCAGCAACAACAAATAGAATAATGC...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR CAA 90 bp GAATATCCAAGGTCCAGCAGTCAACTAAACTTTCTATATAGCTCATCCCAGAAAAAATGGGGCATTGACTaGTATACACATGGACAGATA +
Preference number: 3 (lower is better)
Translates to: EYPRSSSQLNFLYSSSQKKWGID*YTHGQI
Trigger: TATCTGTCCATGTGTATACAAGTCAATGCCCCATTT...TTTCTGGGATGAGCTATATAGAAAGTTTAGTTGACTGCTGGACCTTGGATATTC
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR CAA 90 bp TGTCTTTATACACCTCAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATTCCCATGTGAAAATATaGGTCATTCTTACCCTGGAT +
Preference number: 3 (lower is better)
Translates to: CLYTPQAYAYLIGGGLGNSHVKI*VILTLD
Trigger: ATCCAGGGTAAGAATGACCAATATTTTCACATGGGA...ATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTGAGGTGTATAAAGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR CAA 90 bp TTTATTAATGCCCTCAAGTTAGTGTTGACAAGAATAGATCCTGGGGTTTCTATGACACGAGGAACAGTCTaGTTTACCATCATTGAGACT +
Preference number: 3 (lower is better)
Translates to: FINALKLVLTRIDPGVSMTRGTV*FTIIET
Trigger: AGTCTCAATGATGGTAAACAAGACTGTTCCTCGTGT...CATAGAAACCCCAGGATCTATTCTTGTCAACACTAACTTGAGGGCATTAATAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593195.6
3UTR-3UTR CAA 90 bp TGGATTGACAATAATGACACCAGTCGAACCTTCCATTTTTGTTTCAGGGGTAGAACTCTGTGTACTCCCTaGCTTATGTGTTTTATTTCT +
Preference number: 3 (lower is better)
Translates to: WIDNNDTSRTFHFCFRGRTLCTP*LMCFIS
Trigger: AGAAATAAAACACATAAGCAAGGGAGTACACAGAGT...TCTACCCCTGAAACAAAAATGGAAGGTTCGACTGGTGTCATTATTGTCAATCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR TCA 72 bp CATATGCAAAGAATTCATTATTTAGAGCTGAAGTACTaGGGCGTAAAATTCCATCACTTCCCATCTGAAGGC +
Preference number: 3 (lower is better)
Translates to: HMQRIHYLELKY*GVKFHHFPSEG
Trigger: GCCTTCAGATGGGAAGTGATGGAATTTTACGCCTCAGTACTTCAGCTCTAAATAATGAATTCTTTGCATATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592541.6
3UTR GCA 72 bp AATGGGGCTACAGCAACATGTATTCTTACTCTCGACTaGATTATAAAGCACCATATGTACCAGCTTGTTTTT +
Preference number: 3 (lower is better)
Translates to: NGATATCILTLD*IIKHHMYQLVF
Trigger: AAAAACAAGCTGGTACATATGGTGCTTTATAATGCAGTCGAGAGTAAGAATACATGTTGCTGTAGCCCCATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR TCA 72 bp CATATGCAAAGAATTCATTATTTAGAGCTGAAGTACTaGGGCGTAAAATTCCATCACTTCCCATCTGCCTAT +
Preference number: 3 (lower is better)
Translates to: HMQRIHYLELKY*GVKFHHFPSAY
Trigger: ATAGGCAGATGGGAAGTGATGGAATTTTACGCCTCAGTACTTCAGCTCTAAATAATGAATTCTTTGCATATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593195.6
3UTR TCA 72 bp CTGAATTACAGATTCTTCAGGGATCAAGATATCCTCTaGCTCCAATTCTGCCATTATATCTTTAGGTGGAAT +
Preference number: 3 (lower is better)
Translates to: LNYRFFRDQDIL*LQFCHYIFRWN
Trigger: ATTCCACCTAAAGATATAATGGCAGAATTGGAGTCAGAGGATATCTTGATCCCTGAAGAATCTGTAATTCAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR GCA 72 bp TCTGAAAATGGAGCCTTATCCACTGATGAGATATATTaGTTGTCCTGTAATTTAGCAGATGGAAGCTCATTT +
Preference number: 3 (lower is better)
Translates to: SENGALSTDEIY*LSCNLADGSSF
Trigger: AAATGAGCTTCCATCTGCTAAATTACAGGACAAGCAATATATCTCATCAGTGGATAAGGCTCCATTTTCAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR GCA 72 bp AAAGCTAGGTTCAGAGAAGTCAACTGTAAAATTCCTTaGTGTAATGGCTCATCTATAGAAAAATGCATAACC +
Preference number: 3 (lower is better)
Translates to: KARFREVNCKIP*CNGSSIEKCIT
Trigger: GGTTATGCATTTTTCTATAGATGAGCCATTACAGCAAGGAATTTTACAGTTGACTTCTCTGAACCTAGCTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR CCA 72 bp GTTTGCTTTTTAAATTCTACAGCCACAATCAATCAATaGGTTAATGGCACTCCACATTTTGTGCTCTGTAAT +
Preference number: 3 (lower is better)
Translates to: VCFLNSTATINQ*VNGTPHFVLCN
Trigger: ATTACAGAGCACAAAATGTGGAGTGCCATTAACCCATTGATTGATTGTGGCTGTAGAATTTAAAAAGCAAAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp ACAATGCTCGCTGCAGCAGCCACAGCAGCAGCTGCAGCAGCCTCTCGCTGGGCCAGCCACAGCAGCAGCTaGAGCAGCCTCTCGCTGGGC +
Preference number: 4 (lower is better)
Translates to: TMLAAAATAAAAAASRWASHSSS*SSLSLG
Trigger: GCCCAGCGAGAGGCTGCTGCAGCTGCTGCTGTGGCT...GGCCCAGCGAGAGGCTGCTGCAGCTGCTGCTGTGGCTGCTGCAGCGAGCATTGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTGACCCAGTGACCCGGTaGCCCGCACTCGCTCCGCGG +
Preference number: 4 (lower is better)
Translates to: CAGPHHRTDDATLGLASADPVTR*PALAPR
Trigger: CCGCGGAGCGAGTGCGGGTCACCGGGTCACTGGGTC...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp CAATGCTCGCTGCAGCAGCCACAGCAGCAGCTGCAGCAGCCTCTCGCTGGGCCCTGGAGGCCCTTCCTTTaGGCTGAGCGGAGGAGGCAA +
Preference number: 4 (lower is better)
Translates to: QCSLQQPQQQLQQPLAGPWRPFL*AERRRQ
Trigger: TTGCCTCCTCCGCTCAGCTCAAAGGAAGGGCCTCCA...GGGCCCAGCGAGAGGCTGCTGCAGCTGCTGCTGTGGCTGCTGCAGCGAGCATTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp ACAATGCTCGCTGCAGCAGCCACAGCAGCAGCTGCAGCAGCCTCTCGCTGGGCCCCGGGCCTTGATATCTaGGAGGGTCCTGGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: TMLAAAATAAAAAASRWAPGLDI*EGPGSC
Trigger: ACAGGAGCCAGGACCCTCGCAGATATCAAGGCCCGG...GGCCCAGCGAGAGGCTGCTGCAGCTGCTGCTGTGGCTGCTGCAGCGAGCATTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTGGGCAAAGCCAAGGGTaGAGGGGGAGGGGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: CAGPHHRTDDATLGLASAGQSQG*RGRGRR
Trigger: CCGCCTCCCCCTCCCCCTCCACCCTTGGCTTTGCCC...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp CTCCTGGACTTCCCATGGCTCCAGAGACAATGCTCGCTGCAGCAGCCACAGCAGGCCCTTCCTTTGAGCTaGGCGGAGGAGGCAACCGGG +
Preference number: 4 (lower is better)
Translates to: LLDFPWLQRQCSLQQPQQALPLS*AEEATG
Trigger: CCCGGTTGCCTCCTCCGCTCAGCTCAAAGGAAGGGC...CTGCTGTGGCTGCTGCAGCGAGCATTGTCTCTGGAGCCATGGGAAGTCCAGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTGCCCTTCCTTTGAGCTaGGCGGAGGAGGCAACCGGG +
Preference number: 4 (lower is better)
Translates to: CAGPHHRTDDATLGLASAALPLS*AEEATG
Trigger: CCCGGTTGCCTCCTCCGCTCAGCTCAAAGGAAGGGC...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTGGACAGACGACAGCCTaGGCTCCCTGCACCAGGGAC +
Preference number: 4 (lower is better)
Translates to: CAGPHHRTDDATLGLASAGQTTA*APCTRD
Trigger: GTCCCTGGTGCAGGGAGCTCAGGCTGTCGTCTGTCC...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp CAATGCTCGCTGCAGCAGCCACAGCAGCAGCTGCAGCAGCCTCTCGCTGGGCCCAAGTGGTCTCAGAGGTaGGAAGCATGGAAGACACTG +
Preference number: 4 (lower is better)
Translates to: QCSLQQPQQQLQQPLAGPKWSQR*EAWKTL
Trigger: CAGTGTCTTCCATGCTTCTCACCTCTGAGACCACTT...GGGCCCAGCGAGAGGCTGCTGCAGCTGCTGCTGTGGCTGCTGCAGCGAGCATTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp ACAATGCTCGCTGCAGCAGCCACAGCAGCAGCTGCAGCAGCCTCTCGCTGGGCCGCCAGAAGTCCCACATaGAGAACTACTTTGAGCTCC +
Preference number: 4 (lower is better)
Translates to: TMLAAAATAAAAAASRWAARSPT*RTTLSS
Trigger: GGAGCTCAAAGTAGTTCTTCATGTGGGACTTCTGGC...GGCCCAGCGAGAGGCTGCTGCAGCTGCTGCTGTGGCTGCTGCAGCGAGCATTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTCAGCCTCGGCCCAGGTaGGGTCCTTCTTCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: CAGPHHRTDDATLGLASAQPRPR*GPSSSS
Trigger: AGAGGAAGAAGAAGGACCGCACCTGGGCCGAGGCTG...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp CAATGCTCGCTGCAGCAGCCACAGCAGCAGCTGCAGCAGCCTCTCGCTGGGCCCTTTTGGCTGTTGTTCTaGCAAGGCTGTCTGTGCAGA +
Preference number: 4 (lower is better)
Translates to: QCSLQQPQQQLQQPLAGPFWLLF*QGCLCR
Trigger: TCTGCACAGACAGCCTTGGCAGAACAACAGCCAAAA...GGGCCCAGCGAGAGGCTGCTGCAGCTGCTGCTGTGGCTGCTGCAGCGAGCATTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp AGCGGAGGAGGCAACCGGGTCTCTTTAGAGGTCTGGAAGAGATGGGCTCGAGCTGAGAGGGGGAACCCTTaGTTCCTCTCTGGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: SGGGNRVSLEVWKRWARAERGNP*FLSGRL
Trigger: CAGCCTCCCAGAGAGGAACCAAGGGTTCCCCCTCTC...AGCTCGAGCCCATCTCTTCCAGACCTCTAAAGAGACCCGGTTGCCTCCTCCGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp TACAGTGGTGGTCTCCCGGAGGTGGGCAGACTTGTTGCTAGGAGATCTACAGTTGCAGCAGCCTCTCGCTaGGCCCGAGCTTGTTGGGCC +
Preference number: 4 (lower is better)
Translates to: YSGGLPEVGRLVARRSTVAAASR*ARACWA
Trigger: GGCCCAACAAGCTCGGGCCCAGCGAGAGGCTGCTGC...AACTGTAGATCTCCTAGCAACAAGTCTGCCCACCTCCGGGAGACCACCACTGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp CTCCTGGACTTCCCATGGCTCCAGAGACAATGCTCGCTGCAGCAGCCACAGCAGACTGCTGTAGTACAGTaGTGGTCTCCCGGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: LLDFPWLQRQCSLQQPQQTAVVQ*WSPGGG
Trigger: CCCACCTCCGGGAGACCACCACTGTACTACAGCAGT...CTGCTGTGGCTGCTGCAGCGAGCATTGTCTCTGGAGCCATGGGAAGTCCAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTCAGCTACCGCTGTGCTaGGCCTCACCACCGTACAGA +
Preference number: 4 (lower is better)
Translates to: CAGPHHRTDDATLGLASAQLPLC*ASPPYR
Trigger: TCTGTACGGTGGTGAGGCCCAGCACAGCGGTAGCTG...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTACCGCGGCCGCTGCGGTaGCAGCTCCGGGGATGCTCC +
Preference number: 4 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVPRPLR*QLRGCS
Trigger: GGAGCATCCCCGGAGCTGTCACCGCAGCGGCCGCGG...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp ACAATGCTCGCTGCAGCAGCCACAGCAGCAGCTGCAGCAGCCTCTCGCTGGGCCCCAATTTTGGAAAGCTaGATCTTGAGAGGGGGAACC +
Preference number: 4 (lower is better)
Translates to: TMLAAAATAAAAAASRWAPILES*ILRGGT
Trigger: GGTTCCCCCTCTCAAGATTCAGCTTTCCAAAATTGG...GGCCCAGCGAGAGGCTGCTGCAGCTGCTGCTGTGGCTGCTGCAGCGAGCATTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp ACAATGCTCGCTGCAGCAGCCACAGCAGCAGCTGCAGCAGCCTCTCGCTGGGCCAGATGGGCTCGAGCTTaGTGCTTTGCAAAGAGCTTA +
Preference number: 4 (lower is better)
Translates to: TMLAAAATAAAAAASRWARWARA*CFAKSL
Trigger: TAAGCTCTTTGCAAAGCATCAAGCTCGAGCCCATCT...GGCCCAGCGAGAGGCTGCTGCAGCTGCTGCTGTGGCTGCTGCAGCGAGCATTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp GTTGTTCTGCCAAGGCTGTCTGTGCAGAAACTGGAAGGCCAGAAGTCCCACATGGCCCTTCCTTTGAGCTaGGCGGAGGAGGCAACCGGG +
Preference number: 4 (lower is better)
Translates to: VVLPRLSVQKLEGQKSHMALPLS*AEEATG
Trigger: CCCGGTTGCCTCCTCCGCTCAGCTCAAAGGAAGGGC...CATGTGGGACTTCTGGCCTTCCAGTTTCTGCACAGACAGCCTTGGCAGAACAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTCTAATCACAGACACCTaGGGACACGCCACGGGCTGT +
Preference number: 4 (lower is better)
Translates to: CAGPHHRTDDATLGLASALITDT*GHATGC
Trigger: ACAGCCCGTGGCGTGTCCTCAGGTGTCTGTGATTAG...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp GGCAGGCTGGTACAGGCTCCCTCTGGGCTCTCAGAAGAAAAGGACGTTTCAGAGCCGGGCCTTGATATCTaGGAGGGTCCTGGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: GRLVQAPSGLSEEKDVSEPGLDI*EGPGSC
Trigger: ACAGGAGCCAGGACCCTCGCAGATATCAAGGCCCGG...CTCTGAAACGTCCTTTTCTTCTGAGAGCCCAGAGGGAGCCTGTACCAGCCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp ACAGTGGTGGTCTCCCGGAGGTGGGCAGACTTGTTGCTAGGAGATCTACAGTTTAGCCACAGCAGCAGCTaGAGCAGCCTCTCGCTGGGC +
Preference number: 4 (lower is better)
Translates to: TVVVSRRWADLLLGDLQFSHSSS*SSLSLG
Trigger: GCCCAGCGAGAGGCTGCTGCAGCTGCTGCTGTGGCT...AAACTGTAGATCTCCTAGCAACAAGTCTGCCCACCTCCGGGAGACCACCACTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp GTTCTCGTCTTTCCACCCTCTCCTGGACTTCCCATGGCTCCAGAGACAATGCTCCTGGAGAAGGCAGGCTaGTACAGGCTCCCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: VLVFPPSPGLPMAPETMLLEKAG*YRLPLG
Trigger: GCCCAGAGGGAGCCTGTACCAGCCTGCCTTCTCCAG...GAGCATTGTCTCTGGAGCCATGGGAAGTCCAGGAGAGGGTGGAAAGACGAGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp GCCAGAGTTCTCGTCTTTCCACCCTCTCCTGGACTTCCCATGGCTCCAGAGACATATCTGCGAGGGTCCTaGCTCCTGTGTTCCTCCCGC +
Preference number: 4 (lower is better)
Translates to: ARVLVFPPSPGLPMAPETYLRGS*LLCSSR
Trigger: GCGGGAGGAACACAGGAGCCAGGACCCTCGCAGATA...TGTCTCTGGAGCCATGGGAAGTCCAGGAGAGGGTGGAAAGACGAGAACTCTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp CTTGGGTTAAGAGACTGCTGTAGTACAGTGGTGGTCTCCCGGAGGTGGGCAGACTATCTGCGAGGGTCCTaGCTCCTGTGTTCCTCCCGC +
Preference number: 4 (lower is better)
Translates to: LGLRDCCSTVVVSRRWADYLRGS*LLCSSR
Trigger: GCGGGAGGAACACAGGAGCCAGGACCCTCGCAGATA...GTCTGCCCACCTCCGGGAGACCACCACTGTACTACAGCAGTCTCTTAACCCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTGTGGTCTCCCGGAGGTaGGCAGACTTGTTGCTAGGA +
Preference number: 4 (lower is better)
Translates to: CAGPHHRTDDATLGLASAVVSRR*ADLLLG
Trigger: TCCTAGCAACAAGTCTGCCCACCTCCGGGAGACCAC...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp CTGGAGAAGGCAGGCTGGTACAGGCTCCCTCTGGGCTCTCAGAAGAAAAGGACGGTGGTCTCCCGGAGGTaGGCAGACTTGTTGCTAGGA +
Preference number: 4 (lower is better)
Translates to: LEKAGWYRLPLGSQKKRTVVSRR*ADLLLG
Trigger: TCCTAGCAACAAGTCTGCCCACCTCCGGGAGACCAC...CGTCCTTTTCTTCTGAGAGCCCAGAGGGAGCCTGTACCAGCCTGCCTTCTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp CTCCTGGACTTCCCATGGCTCCAGAGACAATGCTCGCTGCAGCAGCCACAGCAGTCCCATCAGGTGACTTaGAGGGCTCTGATGACTTGG +
Preference number: 4 (lower is better)
Translates to: LLDFPWLQRQCSLQQPQQSHQVT*RALMTW
Trigger: CCAAGTCATCAGAGCCCTCCAAGTCACCTGATGGGA...CTGCTGTGGCTGCTGCAGCGAGCATTGTCTCTGGAGCCATGGGAAGTCCAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp GTTCCTCCCGCCACTGACAGATGTGCTAGTGGATGCTCGAGACTCAGGTTTGGATATCTGCGAGGGTCCTaGCTCCTGTGTTCCTCCCGC +
Preference number: 4 (lower is better)
Translates to: VPPATDRCASGCSRLRFGYLRGS*LLCSSR
Trigger: GCGGGAGGAACACAGGAGCCAGGACCCTCGCAGATA...TCCAAACCTGAGTCTCGAGCATCCACTAGCACATCTGTCAGTGGCGGGAGGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp GGCAGGCTGGTACAGGCTCCCTCTGGGCTCTCAGAAGAAAAGGACGTTTCAGAGGTGGTCTCCCGGAGGTaGGCAGACTTGTTGCTAGGA +
Preference number: 4 (lower is better)
Translates to: GRLVQAPSGLSEEKDVSEVVSRR*ADLLLG
Trigger: TCCTAGCAACAAGTCTGCCCACCTCCGGGAGACCAC...CTCTGAAACGTCCTTTTCTTCTGAGAGCCCAGAGGGAGCCTGTACCAGCCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTACTTTTGAAAGGAGCTaGGCCACGTGCCTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: CAGPHHRTDDATLGLASATFERS*ATCLLS
Trigger: GCTGAGCAGGCACGTGGCCCAGCTCCTTTCAAAAGT...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTCCGCGGCCGCTGCGGTaGCAGCTCCGGGGATGCTCC +
Preference number: 4 (lower is better)
Translates to: FKKIWPTSARSEARMNGCPRPLR*QLRGCS
Trigger: GGAGCATCCCCGGAGCTGTCACCGCAGCGGCCGCGG...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp TCCTGGACTTCCCATGGCTCCAGAGACAATGCTCGCTGCAGCAGCCACAGCAGCTGGAAAGCTGAATCTTaGGAGGGGGAACCCTTGGTT +
Preference number: 4 (lower is better)
Translates to: SWTSHGSRDNARCSSHSSWKAES*EGEPLV
Trigger: AACCAAGGGTTCCCCCTCTCAAGATTCAGCTTTCCA...GCTGCTGTGGCTGCTGCAGCGAGCATTGTCTCTGGAGCCATGGGAAGTCCAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp TACAGTGGTGGTCTCCCGGAGGTGGGCAGACTTGTTGCTAGGAGATCTACAGTTTGGAGGCCCTTCCTTTaGGCTGAGCGGAGGAGGCAA +
Preference number: 4 (lower is better)
Translates to: YSGGLPEVGRLVARRSTVWRPFL*AERRRQ
Trigger: TTGCCTCCTCCGCTCAGCTCAAAGGAAGGGCCTCCA...AACTGTAGATCTCCTAGCAACAAGTCTGCCCACCTCCGGGAGACCACCACTGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTTGCTCAGCAAAGTTATaGCTGGGAGCAGTCGGCTCA +
Preference number: 4 (lower is better)
Translates to: CAGPHHRTDDATLGLASACSAKL*LGAVGS
Trigger: TGAGCCGACTGCTCCCAGTCATAACTTTGCTGAGCA...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTAAACTGCTGTCTGTGTaGGGTACCAGCGTCAGTGTG +
Preference number: 4 (lower is better)
Translates to: CAGPHHRTDDATLGLASAKLLSV*GTSVSV
Trigger: CACACTGACGCTGGTACCTCACACAGACAGCAGTTT...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp GTTGTTCTGCCAAGGCTGTCTGTGCAGAAACTGGAAGGCCAGAAGTCCCACATGCAGCCTCGGCCCAGGTaGGGTCCTTCTTCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: VVLPRLSVQKLEGQKSHMQPRPR*GPSSSS
Trigger: AGAGGAAGAAGAAGGACCGCACCTGGGCCGAGGCTG...CATGTGGGACTTCTGGCCTTCCAGTTTCTGCACAGACAGCCTTGGCAGAACAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp CTGGAGAAGGCAGGCTGGTACAGGCTCCCTCTGGGCTCTCAGAAGAAAAGGACGGGTAAACTCTCCTTCTaGCAGTCGCTGTTTCCACCC +
Preference number: 4 (lower is better)
Translates to: LEKAGWYRLPLGSQKKRTGKLSF*QSLFPP
Trigger: GGGTGGAAACAGCGACTGGCAGAAGGAGAGTTTACC...CGTCCTTTTCTTCTGAGAGCCCAGAGGGAGCCTGTACCAGCCTGCCTTCTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTCCAGAGGCTGTCCTGTaGTCCTCATCCCATCATCAT +
Preference number: 4 (lower is better)
Translates to: CAGPHHRTDDATLGLASAPEAVL*SSSHHH
Trigger: ATGATGATGGGATGAGGAGCACAGGACAGCCTCTGG...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp TCCTGGACTTCCCATGGCTCCAGAGACAATGCTCGCTGCAGCAGCCACAGCAGCCTGCCTATCCACTTCTaGGAGCAAAAGCAGGAGGTA +
Preference number: 4 (lower is better)
Translates to: SWTSHGSRDNARCSSHSSLPIHF*EQKQEV
Trigger: TACCTCCTGCTTTTGCTCCCAGAAGTGGATAGGCAG...GCTGCTGTGGCTGCTGCAGCGAGCATTGTCTCTGGAGCCATGGGAAGTCCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592288.6
ENST00000593195.6
CDS-3UTR CCA 90 bp CTCCTGGACTTCCCATGGCTCCAGAGACAATGCTCGCTGCAGCAGCCACAGCAGCCGCAACTGCATTTCTaGGGTAAACTCTCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: LLDFPWLQRQCSLQQPQQPQLHF*GKLSFC
Trigger: GCAGAAGGAGAGTTTACCCCAGAAATGCAGTTGCGG...CTGCTGTGGCTGCTGCAGCGAGCATTGTCTCTGGAGCCATGGGAAGTCCAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTGTACCAGCGTCAGTGTaGAAGCCGCCATTCTTGTCA +
Preference number: 4 (lower is better)
Translates to: CAGPHHRTDDATLGLASAVPASV*KPPFLS
Trigger: TGACAAGAATGGCGGCTTCCACACTGACGCTGGTAC...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp CAATGCTCGCTGCAGCAGCCACAGCAGCAGCTGCAGCAGCCTCTCGCTGGGCCCTCCCAAATCCTTCATTaGAGGAAGATCCTTCATACA +
Preference number: 4 (lower is better)
Translates to: QCSLQQPQQQLQQPLAGPSQILH*RKILHT
Trigger: TGTATGAAGGATCTTCCTCCAATGAAGGATTTGGGA...GGGCCCAGCGAGAGGCTGCTGCAGCTGCTGCTGTGGCTGCTGCAGCGAGCATTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp CAATGCTCGCTGCAGCAGCCACAGCAGCAGCTGCAGCAGCCTCTCGCTGGGCCCTCAGGTATTGTCTTATaGTTTTCATCCTGGCATTCA +
Preference number: 4 (lower is better)
Translates to: QCSLQQPQQQLQQPLAGPSGIVL*FSSWHS
Trigger: TGAATGCCAGGATGAAAATCATAAGACAATACCTGA...GGGCCCAGCGAGAGGCTGCTGCAGCTGCTGCTGTGGCTGCTGCAGCGAGCATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp ACAATGCTCGCTGCAGCAGCCACAGCAGCAGCTGCAGCAGCCTCTCGCTGGGCCGACATGAGTCATAGATaGAGTGGAAGGAATAAGAGA +
Preference number: 4 (lower is better)
Translates to: TMLAAAATAAAAAASRWADMSHR*SGRNKR
Trigger: TCTCTTATTCCTTCCACTTCATCTATGACTCATGTC...GGCCCAGCGAGAGGCTGCTGCAGCTGCTGCTGTGGCTGCTGCAGCGAGCATTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp AGCGGAGGAGGCAACCGGGTCTCTTTAGAGGTCTGGAAGAGATGGGCTCGAGCTAGCAAGTTCTGGAATTaGAGCAGGGTAGGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: SGGGNRVSLEVWKRWARASKFWN*SRVGLL
Trigger: GAGAAGCCCTACCCTGCTTCAATTCCAGAACTTGCT...AGCTCGAGCCCATCTCTTCCAGACCTCTAAAGAGACCCGGTTGCCTCCTCCGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTCCTTTGTCTGCTCTTTaGTGTGTGCCAGAGTTCTCG +
Preference number: 4 (lower is better)
Translates to: CAGPHHRTDDATLGLASAPLSAL*CVPEFS
Trigger: CGAGAACTCTGGCACACATCAAAGAGCAGACAAAGG...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTCCTGGGATGAAGTTCTaGCACGTTCAAGTAGTTGGC +
Preference number: 4 (lower is better)
Translates to: CAGPHHRTDDATLGLASAPGMKF*HVQVVG
Trigger: GCCAACTACTTGAACGTGTCAGAACTTCATCCCAGG...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp AGGGGGAACCCTTGGTTCCTCTCTGGGAGGCTGTTCTTTCTCAGGTGGGCTGCTAGCCATGCCGGGGTCTaGAACCAGACTTGTTTCTTT +
Preference number: 4 (lower is better)
Translates to: RGNPWFLSGRLFFLRWAASHAGV*NQTCFF
Trigger: AAAGAAACAAGTCTGGTTTCAGACCCCGGCATGGCT...AGCAGCCCACCTGAGAAAGAACAGCCTCCCAGAGAGGAACCAAGGGTTCCCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593195.6
CDS-3UTR GCA 90 bp CAATGCTCGCTGCAGCAGCCACAGCAGCAGCTGCAGCAGCCTCTCGCTGGGCCCCCAGTGGGAGATTTTTaGCCATGTTTCATTTCTTTA +
Preference number: 4 (lower is better)
Translates to: QCSLQQPQQQLQQPLAGPPVGDF*PCFISL
Trigger: TAAAGAAATGAAACATGGGCAAAAATCTCCCACTGG...GGGCCCAGCGAGAGGCTGCTGCAGCTGCTGCTGTGGCTGCTGCAGCGAGCATTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000592288.6
ENST00000593195.6
CDS-3UTR GCA 90 bp TGCTCTTTGATGTGTGCCAGAGTTCTCGTCTTTCCACCCTCTCCTGGACTTCCCAGAGACAATGCTCGCTaGAGCAGCCACAGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: CSLMCARVLVFPPSPGLPRDNAR*SSHSSS
Trigger: GCTGCTGCTGTGGCTGCTGCAGCGAGCATTGTCTCT...GGGAAGTCCAGGAGAGGGTGGAAAGACGAGAACTCTGGCACACATCAAAGAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTATTCTCGGAGACTTGTaGAGGTGGCCGGCAATGTTT +
Preference number: 4 (lower is better)
Translates to: CAGPHHRTDDATLGLASAILGDL*RWPAMF
Trigger: AAACATTGCCGGCCACCTGCACAAGTCTCCGAGAAT...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTCTGCCTATCCACTTCTaGGAGCAAAAGCAGGAGGTA +
Preference number: 4 (lower is better)
Translates to: CAGPHHRTDDATLGLASALPIHF*EQKQEV
Trigger: TACCTCCTGCTTTTGCTCCCAGAAGTGGATAGGCAG...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp AGGGGGAACCCTTGGTTCCTCTCTGGGAGGCTGTTCTTTCTCAGGTGGGCTGCTTGTCTGTGCAGAAACTaGAAGGCCAGAAGTCCCACA +
Preference number: 4 (lower is better)
Translates to: RGNPWFLSGRLFFLRWAACLCRN*KARSPT
Trigger: TGTGGGACTTCTGGCCTTCCAGTTTCTGCACAGACA...AGCAGCCCACCTGAGAAAGAACAGCCTCCCAGAGAGGAACCAAGGGTTCCCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp AGCGGAGGAGGCAACCGGGTCTCTTTAGAGGTCTGGAAGAGATGGGCTCGAGCTTGTCTGTGCAGAAACTaGAAGGCCAGAAGTCCCACA +
Preference number: 4 (lower is better)
Translates to: SGGGNRVSLEVWKRWARACLCRN*KARSPT
Trigger: TGTGGGACTTCTGGCCTTCCAGTTTCTGCACAGACA...AGCTCGAGCCCATCTCTTCCAGACCTCTAAAGAGACCCGGTTGCCTCCTCCGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp CCTTCCTTTGAGCTGAGCGGAGGAGGCAACCGGGTCTCTTTAGAGGTCTGGAAGTCTCTCCCAGAGGTTTaGCAGTGGCGGAAGACTCAT +
Preference number: 4 (lower is better)
Translates to: PSFELSGGGNRVSLEVWKSLPEV*QWRKTH
Trigger: ATGAGTCTTCCGCCACTGCCAAACCTCTGGGAGAGA...CTTCCAGACCTCTAAAGAGACCCGGTTGCCTCCTCCGCTCAGCTCAAAGGAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTGACAGATTCTTCTGCTaGGAGGTAAGGTTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: CAGPHHRTDDATLGLASADRFFC*EVRFSP
Trigger: GGGAGAGAACCTTACCTCCCAGCAGAAGAATCTGTC...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp CTTTGTCTGCTCTTTGATGTGTGCCAGAGTTCTCGTCTTTCCACCCTCTCCTGGGAGAGGGGGAACCCTTaGTTCCTCTCTGGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: LCLLFDVCQSSRLSTLSWERGNP*FLSGRL
Trigger: CAGCCTCCCAGAGAGGAACCAAGGGTTCCCCCTCTC...CCAGGAGAGGGTGGAAAGACGAGAACTCTGGCACACATCAAAGAGCAGACAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp CGGAGGTGGGCAGACTTGTTGCTAGGAGATCTACAGTTTGGATTGACAATAATGGCAGCAGCCTCTCGCTaGGCCCGAGCTTGTTGGGCC +
Preference number: 4 (lower is better)
Translates to: RRWADLLLGDLQFGLTIMAAASR*ARACWA
Trigger: GGCCCAACAAGCTCGGGCCCAGCGAGAGGCTGCTGC...CATTATTGTCAATCCAAACTGTAGATCTCCTAGCAACAAGTCTGCCCACCTCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp CTGGAGAAGGCAGGCTGGTACAGGCTCCCTCTGGGCTCTCAGAAGAAAAGGACGGTCTCTTTAGAGGTCTaGAAGAGATGGGCTCGAGCT +
Preference number: 4 (lower is better)
Translates to: LEKAGWYRLPLGSQKKRTVSLEV*KRWARA
Trigger: AGCTCGAGCCCATCTCTTCCAGACCTCTAAAGAGAC...CGTCCTTTTCTTCTGAGAGCCCAGAGGGAGCCTGTACCAGCCTGCCTTCTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTGCTTGGCTCCCAATCTaGGCTGTGGCAACACTTTTT +
Preference number: 4 (lower is better)
Translates to: CAGPHHRTDDATLGLASAAWLPI*AVATLF
Trigger: AAAAAGTGTTGCCACAGCCCAGATTGGGAGCCAAGC...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTTCTCGCTTTCTCATTTaGAGTGGTGCCAGAGTCCCT +
Preference number: 4 (lower is better)
Translates to: CAGPHHRTDDATLGLASASRFLI*SGARVP
Trigger: AGGGACTCTGGCACCACTCCAAATGAGAAAGCGAGA...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR CAA 72 bp TTCTTCTGCTGGGAGGTAAGGTTCTCTCCCAGAGGTTaGGCAGTGGCGGAAGACTCATCTTTCTGCGGGGAG +
Preference number: 4 (lower is better)
Translates to: FFCWEVRFSPRG*AVAEDSSFCGE
Trigger: CTCCCCGCAGAAAGATGAGTCTTCCGCCACTGCCAAACCTCTGGGAGAGAACCTTACCTCCCAGCAGAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp ACAATGCTCGCTGCAGCAGCCACAGCAGCAGCTGCAGCAGCCTCTCGCTGGGCCAATCGTTTTAAGTGCTaGCTTGTTTGTTTTCCAGTG +
Preference number: 4 (lower is better)
Translates to: TMLAAAATAAAAAASRWANRFKC*LVCFPV
Trigger: CACTGGAAAACAAACAAGTCAGCACTTAAAACGATT...GGCCCAGCGAGAGGCTGCTGCAGCTGCTGCTGTGGCTGCTGCAGCGAGCATTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000592288.6
ENST00000593195.6
CDS-3UTR TCA 90 bp TCCTGGACTTCCCATGGCTCCAGAGACAATGCTCGCTGCAGCAGCCACAGCAGCCATGAAGAACTACTTTaGGCTCCAGCGTTGTTTGGT +
Preference number: 4 (lower is better)
Translates to: SWTSHGSRDNARCSSHSSHEELL*APALFG
Trigger: ACCAAACAACGCTGGAGCTCAAAGTAGTTCTTCATG...GCTGCTGTGGCTGCTGCAGCGAGCATTGTCTCTGGAGCCATGGGAAGTCCAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp CTTGGGTTAAGAGACTGCTGTAGTACAGTGGTGGTCTCCCGGAGGTGGGCAGACGCCAGAAGTCCCACATaGAGAACTACTTTGAGCTCC +
Preference number: 4 (lower is better)
Translates to: LGLRDCCSTVVVSRRWADARSPT*RTTLSS
Trigger: GGAGCTCAAAGTAGTTCTTCATGTGGGACTTCTGGC...GTCTGCCCACCTCCGGGAGACCACCACTGTACTACAGCAGTCTCTTAACCCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp CTTGGGTTAAGAGACTGCTGTAGTACAGTGGTGGTCTCCCGGAGGTGGGCAGACAAGTGGTCTCAGAGGTaGGAAGCATGGAAGACACTG +
Preference number: 4 (lower is better)
Translates to: LGLRDCCSTVVVSRRWADKWSQR*EAWKTL
Trigger: CAGTGTCTTCCATGCTTCTCACCTCTGAGACCACTT...GTCTGCCCACCTCCGGGAGACCACCACTGTACTACAGCAGTCTCTTAACCCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp TCCTGGACTTCCCATGGCTCCAGAGACAATGCTCGCTGCAGCAGCCACAGCAGCGATTTACAGGTTTGCTaGCTCAGGGTCTTATTGTGC +
Preference number: 4 (lower is better)
Translates to: SWTSHGSRDNARCSSHSSDLQVC*LRVLLC
Trigger: GCACAATAAGACCCTGAGTCAGCAAACCTGTAAATC...GCTGCTGTGGCTGCTGCAGCGAGCATTGTCTCTGGAGCCATGGGAAGTCCAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTGACTTTACACGGAATTaGTCGGTTTATGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: CAGPHHRTDDATLGLASADFTRN*SVYGCW
Trigger: CCAGCAGCCATAAACCGATCAATTCCGTGTAAAGTC...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp GCCAGAGTTCTCGTCTTTCCACCCTCTCCTGGACTTCCCATGGCTCCAGAGACAAGACTAAATCCAACGTaGCATCTGCTGGGCATGACG +
Preference number: 4 (lower is better)
Translates to: ARVLVFPPSPGLPMAPETRLNPT*HLLGMT
Trigger: CGTCATGCCCAGCAGATGGCACGTTGGATTTAGTCT...TGTCTCTGGAGCCATGGGAAGTCCAGGAGAGGGTGGAAAGACGAGAACTCTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTGCCTTTTTGGTGTGCTaGTGGAAGGAAGACACTAAC +
Preference number: 4 (lower is better)
Translates to: CAGPHHRTDDATLGLASAAFLVC*WKEDTN
Trigger: GTTAGTGTCTTCCTTCCAGCAGCACACCAAAAAGGC...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp CTCCTGGACTTCCCATGGCTCCAGAGACAATGCTCGCTGCAGCAGCCACAGCAGGAAGGCGAATCCGACTaGTCATCAGACACCTTTAAT +
Preference number: 4 (lower is better)
Translates to: LLDFPWLQRQCSLQQPQQEGESD*SSDTFN
Trigger: ATTAAAGGTGTCTGATGAGCAGTCGGATTCGCCTTC...CTGCTGTGGCTGCTGCAGCGAGCATTGTCTCTGGAGCCATGGGAAGTCCAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp TGCTGCTGCCTCAAAGCCTGTTTAAGAGCCTTTTTGGTGTGCTGCTGGAAGGAACCGGGCCTTGATATCTaGGAGGGTCCTGGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: CCCLKACLRAFLVCCWKEPGLDI*EGPGSC
Trigger: ACAGGAGCCAGGACCCTCGCAGATATCAAGGCCCGG...TTCCTTCCAGCAGCACACCAAAAAGGCTCTTAAACAGGCTTTGAGGCAGCAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTCTGCTCTTTGATGTGTaGCAGAGTTCTCGTCTTTCC +
Preference number: 4 (lower is better)
Translates to: CAGPHHRTDDATLGLASALLFDV*QSSRLS
Trigger: GGAAAGACGAGAACTCTGGCACACATCAAAGAGCAG...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTAGGAAACTTGTTTCATaGCCAGTTCACAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: CAGPHHRTDDATLGLASARKLVS*PVHSCC
Trigger: GCAGCAGCTGTGAACTGGGCATGAAACAAGTTTCCT...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTGCCATTCAGTTGGGATaGATCCTCCCCTTTATGAGA +
Preference number: 4 (lower is better)
Translates to: CAGPHHRTDDATLGLASAAIQLG*ILPFMR
Trigger: TCTCATAAAGGGGAGGATGCATCCCAACTGAATGGC...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACAGATGGAGCGAGGGGGTaGGGTGGAGTGGGTGGGGGC +
Preference number: 4 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTDGARG*GGVGGG
Trigger: GCCCCCACCCACTCCACCCCACCCCCTCGCTCCATC...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTAGGCTCTGGAGAAGCTaGGCTTTTCATGCTTTTTGG +
Preference number: 4 (lower is better)
Translates to: CAGPHHRTDDATLGLASARLWRS*AFHAFW
Trigger: CCAAAAAGCATGAAAAGCCCAGCTTCTCCAGAGCCT...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp GTTCTCGTCTTTCCACCCTCTCCTGGACTTCCCATGGCTCCAGAGACAATGCTCGGTACAGGCTCCCTCTaGGCTCTCAGAAGAAAAGGA +
Preference number: 4 (lower is better)
Translates to: VLVFPPSPGLPMAPETMLGTGSL*ALRRKG
Trigger: TCCTTTTCTTCTGAGAGCCCAGAGGGAGCCTGTACC...GAGCATTGTCTCTGGAGCCATGGGAAGTCCAGGAGAGGGTGGAAAGACGAGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp CCATCAGGTGACTTGGAGGGCTCTGATGACTTGGAAGTATGTGAGGTTTCTAACCTGGAGAAGGCAGGCTaGTACAGGCTCCCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: PSGDLEGSDDLEVCEVSNLEKAG*YRLPLG
Trigger: GCCCAGAGGGAGCCTGTACCAGCCTGCCTTCTCCAG...GTTAGAAACCTCACATACTTCCAAGTCATCAGAGCCCTCCAAGTCACCTGATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTTCACAGTGGTACCCATaGATACAGTGGCCTGTTCTT +
Preference number: 4 (lower is better)
Translates to: CAGPHHRTDDATLGLASASQWYP*IQWPVL
Trigger: AAGAACAGGCCACTGTATCCATGGGTACCACTGTGA...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTTCCCAATCTGGGCTGTaGCAACACTTTTTCCAAAGG +
Preference number: 4 (lower is better)
Translates to: CAGPHHRTDDATLGLASASQSGL*QHFFQR
Trigger: CCTTTGGAAAAAGTGTTGCCACAGCCCAGATTGGGA...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTCTTACCATCTGGATTTaGAGAGCTGGGCGGAATTTC +
Preference number: 4 (lower is better)
Translates to: CAGPHHRTDDATLGLASALTIWI*RAGRNF
Trigger: GAAATTCCGCCCAGCTCTCCAAATCCAGATGGTAAG...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTTGGGCTTATGGCTATTaGCTGGCCAATTGCTCTCAT +
Preference number: 4 (lower is better)
Translates to: CAGPHHRTDDATLGLASAWAYGY*LANCSH
Trigger: ATGAGAGCAATTGGCCAGCCAATAGCCATAAGCCCA...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp TGTCTTTATACACCTCAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATGACCCAGTGACCCGGTaGCCCGCACTCGCTCCGCGG +
Preference number: 4 (lower is better)
Translates to: CLYTPQAYAYLIGGGLGNDPVTR*PALAPR
Trigger: CCGCGGAGCGAGTGCGGGTCACCGGGTCACTGGGTC...ATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTGAGGTGTATAAAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTATGTTCCGGGTTGACTaGTCATCTTCTATCCTAGCT +
Preference number: 4 (lower is better)
Translates to: CAGPHHRTDDATLGLASAMFRVD*SSSILA
Trigger: AGCTAGGATAGAAGATGATCAGTCAACCCGGAACAT...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp CTTGGGTTAAGAGACTGCTGTAGTACAGTGGTGGTCTCCCGGAGGTGGGCAGACAGATGGGCTCGAGCTTaGTGCTTTGCAAAGAGCTTA +
Preference number: 4 (lower is better)
Translates to: LGLRDCCSTVVVSRRWADRWARA*CFAKSL
Trigger: TAAGCTCTTTGCAAAGCATCAAGCTCGAGCCCATCT...GTCTGCCCACCTCCGGGAGACCACCACTGTACTACAGCAGTCTCTTAACCCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTTGCTGTTTTACCCACTaGGGTAGTTTGAAGAGGCAA +
Preference number: 4 (lower is better)
Translates to: CAGPHHRTDDATLGLASACCFTH*GSLKRQ
Trigger: TTGCCTCTTCAAACTACCTCAGTGGGTAAAACAGCA...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp GGCTGGTACAGGCTCCCTCTGGGCTCTCAGAAGAAAAGGACGTTTCAGAGATGCTTCTCCATGGGCATTTaGCTCGGCCATATCTGTACC +
Preference number: 4 (lower is better)
Translates to: GWYRLPLGSQKKRTFQRCFSMGI*LGHICT
Trigger: GGTACAGATATGGCCGAGGCAAATGCCCATGGAGAA...GCATCTCTGAAACGTCCTTTTCTTCTGAGAGCCCAGAGGGAGCCTGTACCAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp GCCAGAGTTCTCGTCTTTCCACCCTCTCCTGGACTTCCCATGGCTCCAGAGACACTTGGGTTAAGAGACTaGTGTAGTACAGTGGTGGTC +
Preference number: 4 (lower is better)
Translates to: ARVLVFPPSPGLPMAPETLGLRD*CSTVVV
Trigger: GACCACCACTGTACTACAGCAGTCTCTTAACCCAAG...TGTCTCTGGAGCCATGGGAAGTCCAGGAGAGGGTGGAAAGACGAGAACTCTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTCCAGTTCACAGCTGCTaGTTAAACCTTCCTCAAAAG +
Preference number: 4 (lower is better)
Translates to: CAGPHHRTDDATLGLASAPVHSC*LNLPQK
Trigger: CTTTTGAGGAAGGTTTAAGCAGCAGCTGTGAACTGG...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp CTCCTGGACTTCCCATGGCTCCAGAGACAATGCTCGCTGCAGCAGCCACAGCAGGGCTTGAATCTCGAGTaGAAGATGCTTCATCAGTTA +
Preference number: 4 (lower is better)
Translates to: LLDFPWLQRQCSLQQPQQGLNLE*KMLHQL
Trigger: TAACTGATGAAGCATCTTCCACTCGAGATTCAAGCC...CTGCTGTGGCTGCTGCAGCGAGCATTGTCTCTGGAGCCATGGGAAGTCCAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp GGCTGGTACAGGCTCCCTCTGGGCTCTCAGAAGAAAAGGACGTTTCAGAGATGCAGCTCCAGCGTTGTTTaGTCCAGTAGTGAGCTTCAC +
Preference number: 4 (lower is better)
Translates to: GWYRLPLGSQKKRTFQRCSSSVV*SSSELH
Trigger: GTGAAGCTCACTACTGGACCAAACAACGCTGGAGCT...GCATCTCTGAAACGTCCTTTTCTTCTGAGAGCCCAGAGGGAGCCTGTACCAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTACTGGAGAAGGCAGGCTaGTACAGGCTCCCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVLEKAG*YRLPLG
Trigger: GCCCAGAGGGAGCCTGTACCAGCCTGCCTTCTCCAG...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp GACAGATGTGCTAGTGGATGCTCGAGACTCAGGTTTGGAGACTGGTTGGCTCTTCTGTGTTTCCCCTCCTaGAGAAGGCAGGCTGGTACA +
Preference number: 4 (lower is better)
Translates to: DRCASGCSRLRFGDWLALLCFPS*RRQAGT
Trigger: TGTACCAGCCTGCCTTCTCCAGGAGGGGAAACACAG...AAGAGCCAACCAGTCTCCAAACCTGAGTCTCGAGCATCCACTAGCACATCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp AGGTTTGGCAGTGGCGGAAGACTCATCTTTCTGCGGGGAGAGTGGCTCTTCAGATTTCTGCGGGGAGAGTaGCTCTTCAGATACAGAAGG +
Preference number: 4 (lower is better)
Translates to: RFGSGGRLIFLRGEWLFRFLRGE*LFRYRR
Trigger: CCTTCTGTATCTGAAGAGCCACTCTCCCCGCAGAAA...TCTGAAGAGCCACTCTCCCCGCAGAAAGATGAGTCTTCCGCCACTGCCAAACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp ACAGTGGTGGTCTCCCGGAGGTGGGCAGACTTGTTGCTAGGAGATCTACAGTTTTCTCTCCCAGAGGTTTaGCAGTGGCGGAAGACTCAT +
Preference number: 4 (lower is better)
Translates to: TVVVSRRWADLLLGDLQFSLPEV*QWRKTH
Trigger: ATGAGTCTTCCGCCACTGCCAAACCTCTGGGAGAGA...AAACTGTAGATCTCCTAGCAACAAGTCTGCCCACCTCCGGGAGACCACCACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp CTCCTGGACTTCCCATGGCTCCAGAGACAATGCTCGCTGCAGCAGCCACAGCAGGTCAGTGGCAGTTTCTaGAAGTTTACTTGGGTTAAG +
Preference number: 4 (lower is better)
Translates to: LLDFPWLQRQCSLQQPQQVSGSF*KFTWVK
Trigger: CTTAACCCAAGTAAACTTCCAGAAACTGCCACTGAC...CTGCTGTGGCTGCTGCAGCGAGCATTGTCTCTGGAGCCATGGGAAGTCCAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTCAGCAAAGTTATGACTaGGAGCAGTCGGCTCATTTA +
Preference number: 4 (lower is better)
Translates to: CAGPHHRTDDATLGLASAQQSYD*EQSAHL
Trigger: TAAATGAGCCGACTGCTCCCAGTCATAACTTTGCTG...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTGGGCAAAGCCAAGGGTaGAGGGGGAGGGGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPGQSQG*RGRGRR
Trigger: CCGCCTCCCCCTCCCCCTCCACCCTTGGCTTTGCCC...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR CAA 72 bp GGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTaGGCTTCAGCTTCTAAAACCTGGGACTTCATTACA +
Preference number: 4 (lower is better)
Translates to: GPHHRTDDATLG*ASASKTWDFIT
Trigger: TGTAATGAAGTCCCAGGTTTTAGAAGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp TGCATAACCACTTTAACTCATTCCTCTCATTCTCCTTACACATCTGCATTTCCGCGGGCGCGGAGACAATaGCCCAGTGACCCGGTGACC +
Preference number: 4 (lower is better)
Translates to: CITTLTHSSHSPYTSAFPRARRQ*PSDPVT
Trigger: GGTCACCGGGTCACTGGGTCATTGTCTCCGCGCCCG...CGGAAATGCAGATGTGTAAGGAGAATGAGAGGAATGAGTTAAAGTGGTTATGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTCGGGCGCGGAGACAATaGCCCAGTGACCCGGTGACC +
Preference number: 4 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPRARRQ*PSDPVT
Trigger: GGTCACCGGGTCACTGGGTCATTGTCTCCGCGCCCG...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp AGGTTTGGCAGTGGCGGAAGACTCATCTTTCTGCGGGGAGAGTGGCTCTTCAGAGAGAGCATAGAGGCCTaGCTTTCCAGGGATTTTGAA +
Preference number: 4 (lower is better)
Translates to: RFGSGGRLIFLRGEWLFRESIEA*LSRDFE
Trigger: TTCAAAATCCCTGGAAAGTCAGGCCTCTATGCTCTC...TCTGAAGAGCCACTCTCCCCGCAGAAAGATGAGTCTTCCGCCACTGCCAAACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp GGCAGGCTGGTACAGGCTCCCTCTGGGCTCTCAGAAGAAAAGGACGTTTCAGAGCTCTACTGCAGTTTCTaGCTCCTTATGTTCTGTGTC +
Preference number: 4 (lower is better)
Translates to: GRLVQAPSGLSEEKDVSELYCSF*LLMFCV
Trigger: GACACAGAACATAAGGAGTCAGAAACTGCAGTAGAG...CTCTGAAACGTCCTTTTCTTCTGAGAGCCCAGAGGGAGCCTGTACCAGCCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp GTTCCTCCCGCCACTGACAGATGTGCTAGTGGATGCTCGAGACTCAGGTTTGGACCAATTTTGGAAAGCTaGATCTTGAGAGGGGGAACC +
Preference number: 4 (lower is better)
Translates to: VPPATDRCASGCSRLRFGPILES*ILRGGT
Trigger: GGTTCCCCCTCTCAAGATTCAGCTTTCCAAAATTGG...TCCAAACCTGAGTCTCGAGCATCCACTAGCACATCTGTCAGTGGCGGGAGGAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp GGGGTTCTTCATGAGAATTGGTTAGACTTTCAGCCTCCTCAGAAAATTCAGGTAGCCCTTCCTTTGAGCTaGGCGGAGGAGGCAACCGGG +
Preference number: 4 (lower is better)
Translates to: GVLHENWLDFQPPQKIQVALPLS*AEEATG
Trigger: CCCGGTTGCCTCCTCCGCTCAGCTCAAAGGAAGGGC...TACCTGAATTTTCTGAGGAGGCTGAAAGTCTAACCAATTCTCATGAAGAACCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp GCTAGTGGATGCTCGAGACTCAGGTTTGGAGACTGGTTGGCTCTTGATTATAAATGGAGGCCCTTCCTTTaGGCTGAGCGGAGGAGGCAA +
Preference number: 4 (lower is better)
Translates to: ASGCSRLRFGDWLALDYKWRPFL*AERRRQ
Trigger: TTGCCTCCTCCGCTCAGCTCAAAGGAAGGGCCTCCA...TTTATAATCAAGAGCCAACCAGTCTCCAAACCTGAGTCTCGAGCATCCACTAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTTGCACCTGCATTTTCTaGGCAGCTAATTGGGTAAAA +
Preference number: 4 (lower is better)
Translates to: CAGPHHRTDDATLGLASACTCIF*AANWVK
Trigger: TTTTACCCAATTAGCTGCTCAGAAAATGCAGGTGCA...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp TGCTCTTTGATGTGTGCCAGAGTTCTCGTCTTTCCACCCTCTCCTGGACTTCCCCATTTCCGGAAGGAATaGACGGAACCACTCCAATGC +
Preference number: 4 (lower is better)
Translates to: CSLMCARVLVFPPSPGLPHFRKE*TEPLQC
Trigger: GCATTGGAGTGGTTCCGTTCATTCCTTCCGGAAATG...GGGAAGTCCAGGAGAGGGTGGAAAGACGAGAACTCTGGCACACATCAAAGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp AGGGGGAACCCTTGGTTCCTCTCTGGGAGGCTGTTCTTTCTCAGGTGGGCTGCTATCTCGAGTGGAAGATaGTTCATCAGTTACCTGCTT +
Preference number: 4 (lower is better)
Translates to: RGNPWFLSGRLFFLRWAAISSGR*FISYLL
Trigger: AAGCAGGTAACTGATGAAGCATCTTCCACTCGAGAT...AGCAGCCCACCTGAGAAAGAACAGCCTCCCAGAGAGGAACCAAGGGTTCCCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp AGCGGAGGAGGCAACCGGGTCTCTTTAGAGGTCTGGAAGAGATGGGCTCGAGCTCTGTTTCCACCCTTGTaGTGCATATGCAAAGAATTC +
Preference number: 4 (lower is better)
Translates to: SGGGNRVSLEVWKRWARALFPPL*CICKEF
Trigger: GAATTCTTTGCATATGCAGCACAAGGGTGGAAACAG...AGCTCGAGCCCATCTCTTCCAGACCTCTAAAGAGACCCGGTTGCCTCCTCCGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp CTGGAGAAGGCAGGCTGGTACAGGCTCCCTCTGGGCTCTCAGAAGAAAAGGACGCTGTTTCCACCCTTGTaGTGCATATGCAAAGAATTC +
Preference number: 4 (lower is better)
Translates to: LEKAGWYRLPLGSQKKRTLFPPL*CICKEF
Trigger: GAATTCTTTGCATATGCAGCACAAGGGTGGAAACAG...CGTCCTTTTCTTCTGAGAGCCCAGAGGGAGCCTGTACCAGCCTGCCTTCTCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp TCCTGGACTTCCCATGGCTCCAGAGACAATGCTCGCTGCAGCAGCCACAGCAGCATTCCTCTCTTGACATaGCCAGCTTTTCTCCATAAA +
Preference number: 4 (lower is better)
Translates to: SWTSHGSRDNARCSSHSSIPLLT*PAFLHK
Trigger: TTTATGGAGAAAAGCTGGGCATGTCAAGAGAGGAAT...GCTGCTGTGGCTGCTGCAGCGAGCATTGTCTCTGGAGCCATGGGAAGTCCAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp GTTGTTCTGCCAAGGCTGTCTGTGCAGAAACTGGAAGGCCAGAAGTCCCACATGGAAGACTCATCTTTCTaGGGGGAGAGTGGCTCTTCA +
Preference number: 4 (lower is better)
Translates to: VVLPRLSVQKLEGQKSHMEDSSF*GESGSS
Trigger: TGAAGAGCCACTCTCCCCGCAGAAAGATGAGTCTTC...CATGTGGGACTTCTGGCCTTCCAGTTTCTGCACAGACAGCCTTGGCAGAACAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp AGGGGGAACCCTTGGTTCCTCTCTGGGAGGCTGTTCTTTCTCAGGTGGGCTGCTTTAGACAGATTCTTCTaGTGGGAGGTAAGGTTCTCT +
Preference number: 4 (lower is better)
Translates to: RGNPWFLSGRLFFLRWAALDRFF*WEVRFS
Trigger: AGAGAACCTTACCTCCCAGCAGAAGAATCTGTCTAA...AGCAGCCCACCTGAGAAAGAACAGCCTCCCAGAGAGGAACCAAGGGTTCCCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTATCTTCAGACGGAAATaGTTCAGGAGCAATGGAAGA +
Preference number: 4 (lower is better)
Translates to: CAGPHHRTDDATLGLASAIFRRK*FRSNGR
Trigger: TCTTCCATTGCTCCTGAAGCATTTCCGTCTGAAGAT...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTAGCCACAGCAGCAGCTaGAGCAGCCTCTCGCTGGGC +
Preference number: 4 (lower is better)
Translates to: FKKIWPTSARSEARMNGCSHSSS*SSLSLG
Trigger: GCCCAGCGAGAGGCTGCTGCAGCTGCTGCTGTGGCT...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp AGAAACCAGGCTCTGGAGAAGCTGGGCTTTTCATGCTTTTTGGCTGTTGTTCTGTGGCTCCAGAGACAATaGTCGCTGCAGCAGCCACAG +
Preference number: 4 (lower is better)
Translates to: RNQALEKLGFSCFLAVVLWLQRQ*SLQQPQ
Trigger: CTGTGGCTGCTGCAGCGAGCATTGTCTCTGGAGCCA...CAGAACAACAGCCAAAAAGCATGAAAAGCCCAGCTTCTCCAGAGCCTGGTTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp GAATATCCAAGGTCCAGCAGTCAACTAAACTTTCTATATAGCTCATCCCAGAAAGATGGAGCGAGGGGGTaGGGTGGAGTGGGTGGGGGC +
Preference number: 4 (lower is better)
Translates to: EYPRSSSQLNFLYSSSQKDGARG*GGVGGG
Trigger: GCCCCCACCCACTCCACCCCACCCCCTCGCTCCATC...TTTCTGGGATGAGCTATATAGAAAGTTTAGTTGACTGCTGGACCTTGGATATTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTTTTTTGGTGTGCTGCTaGAAGGAAGACACTAACTTG +
Preference number: 4 (lower is better)
Translates to: CAGPHHRTDDATLGLASAFLVCC*KEDTNL
Trigger: CAAGTTAGTGTCTTCCTTCCAGCAGCACACCAAAAA...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTTTATTTTGGGGGTACTaGTCTCTACTGCAGTTTCTG +
Preference number: 4 (lower is better)
Translates to: CAGPHHRTDDATLGLASALFWGY*SLLQFL
Trigger: CAGAAACTGCAGTAGAGACCAGTACCCCCAAAATAA...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp CTTTGTCTGCTCTTTGATGTGTGCCAGAGTTCTCGTCTTTCCACCCTCTCCTGGGGTACAGGCTCCCTCTaGGCTCTCAGAAGAAAAGGA +
Preference number: 4 (lower is better)
Translates to: LCLLFDVCQSSRLSTLSWGTGSL*ALRRKG
Trigger: TCCTTTTCTTCTGAGAGCCCAGAGGGAGCCTGTACC...CCAGGAGAGGGTGGAAAGACGAGAACTCTGGCACACATCAAAGAGCAGACAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTAAGGAAGTGGCAAACTaGATACAAAAGTGGTCTCAG +
Preference number: 4 (lower is better)
Translates to: CAGPHHRTDDATLGLASAKEVAN*IQKWSQ
Trigger: CTGAGACCACTTTTGTATCCAGTTTGCCACTTCCTT...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp TTACTTGGGTTAAGAGACTGCTGTAGTACAGTGGTGGTCTCCCGGAGGTGGGCATTTCTGCGGGGAGAGTaGCTCTTCAGATACAGAAGG +
Preference number: 4 (lower is better)
Translates to: LLGLRDCCSTVVVSRRWAFLRGE*LFRYRR
Trigger: CCTTCTGTATCTGAAGAGCCACTCTCCCCGCAGAAA...TGCCCACCTCCGGGAGACCACCACTGTACTACAGCAGTCTCTTAACCCAAGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp ACAGTGGTGGTCTCCCGGAGGTGGGCAGACTTGTTGCTAGGAGATCTACAGTTTCCAGAGGTTTGGCAGTaGCGGAAGACTCATCTTTCT +
Preference number: 4 (lower is better)
Translates to: TVVVSRRWADLLLGDLQFPEVWQ*RKTHLS
Trigger: AGAAAGATGAGTCTTCCGCCACTGCCAAACCTCTGG...AAACTGTAGATCTCCTAGCAACAAGTCTGCCCACCTCCGGGAGACCACCACTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp GGAAGTTTACTTGGGTTAAGAGACTGCTGTAGTACAGTGGTGGTCTCCCGGAGGTCCCATCAGGTGACTTaGAGGGCTCTGATGACTTGG +
Preference number: 4 (lower is better)
Translates to: GSLLGLRDCCSTVVVSRRSHQVT*RALMTW
Trigger: CCAAGTCATCAGAGCCCTCCAAGTCACCTGATGGGA...CCTCCGGGAGACCACCACTGTACTACAGCAGTCTCTTAACCCAAGTAAACTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTATATCTGCGAGGGTCCTaGCTCCTGTGTTCCTCCCGC +
Preference number: 4 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVYLRGS*LLCSSR
Trigger: GCGGGAGGAACACAGGAGCCAGGACCCTCGCAGATA...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp GCTAGTGGATGCTCGAGACTCAGGTTTGGAGACTGGTTGGCTCTTGATTATAAATGGGCCCGAGCTTGTTaGGCCCGGGCCTTGATATCT +
Preference number: 4 (lower is better)
Translates to: ASGCSRLRFGDWLALDYKWARAC*ARALIS
Trigger: AGATATCAAGGCCCGGGCCCAACAAGCTCGGGCCCA...TTTATAATCAAGAGCCAACCAGTCTCCAAACCTGAGTCTCGAGCATCCACTAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTGCAGCAGCCTCTCGCTaGGCCCGAGCTTGTTGGGCC +
Preference number: 4 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPAAASR*ARACWA
Trigger: GGCCCAACAAGCTCGGGCCCAGCGAGAGGCTGCTGC...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp GGATTGACAATAATGACACCAGTCGAACCTTCCATTTTTGTTTCAGGGGTAGAAGCAGCAGCCTCTCGCTaGGCCCGAGCTTGTTGGGCC +
Preference number: 4 (lower is better)
Translates to: GLTIMTPVEPSIFVSGVEAAASR*ARACWA
Trigger: GGCCCAACAAGCTCGGGCCCAGCGAGAGGCTGCTGC...TTCTACCCCTGAAACAAAAATGGAAGGTTCGACTGGTGTCATTATTGTCAATCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp TGCATAACCACTTTAACTCATTCCTCTCATTCTCCTTACACATCTGCATTTCCGGCAGCAGCCTCTCGCTaGGCCCGAGCTTGTTGGGCC +
Preference number: 4 (lower is better)
Translates to: CITTLTHSSHSPYTSAFPAAASR*ARACWA
Trigger: GGCCCAACAAGCTCGGGCCCAGCGAGAGGCTGCTGC...CGGAAATGCAGATGTGTAAGGAGAATGAGAGGAATGAGTTAAAGTGGTTATGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp GCAGTTTCTGGAAGTTTACTTGGGTTAAGAGACTGCTGTAGTACAGTGGTGGTCGCTGTAGTACAGTGGTaGTCTCCCGGAGGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: AVSGSLLGLRDCCSTVVVAVVQW*SPGGGQ
Trigger: CTGCCCACCTCCGGGAGACCACCACTGTACTACAGC...GACCACCACTGTACTACAGCAGTCTCTTAACCCAAGTAAACTTCCAGAAACTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTTATAATGGCTATGCATaGAGTGTCAGTTCCCTGGAT +
Preference number: 4 (lower is better)
Translates to: CAGPHHRTDDATLGLASAYNGYA*SVSSLD
Trigger: ATCCAGGGAACTGACACTCCATGCATAGCCATTATA...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTCATCACCTTCTTTCATaGGCATATTGGGGGATAACA +
Preference number: 4 (lower is better)
Translates to: CAGPHHRTDDATLGLASAHHLLS*AYWGIT
Trigger: TGTTATCCCCCAATATGCCCATGAAAGAAGGTGATG...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp GTTCTCGTCTTTCCACCCTCTCCTGGACTTCCCATGGCTCCAGAGACAATGCTCTGTGTTAGTAAGGCTTaGATCTCGAGTGGAAGATGC +
Preference number: 4 (lower is better)
Translates to: VLVFPPSPGLPMAPETMLCVSKA*ISSGRC
Trigger: GCATCTTCCACTCGAGATTCAAGCCTTACTAACACA...GAGCATTGTCTCTGGAGCCATGGGAAGTCCAGGAGAGGGTGGAAAGACGAGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp GGCTGGTACAGGCTCCCTCTGGGCTCTCAGAAGAAAAGGACGTTTCAGAGATGCCATGAAGAACTACTTTaGGCTCCAGCGTTGTTTGGT +
Preference number: 4 (lower is better)
Translates to: GWYRLPLGSQKKRTFQRCHEELL*APALFG
Trigger: ACCAAACAACGCTGGAGCTCAAAGTAGTTCTTCATG...GCATCTCTGAAACGTCCTTTTCTTCTGAGAGCCCAGAGGGAGCCTGTACCAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp GGCAGGCTGGTACAGGCTCCCTCTGGGCTCTCAGAAGAAAAGGACGTTTCAGAGTCTGTGTCACTGACATaGGTCATAGATGAAGTGGAA +
Preference number: 4 (lower is better)
Translates to: GRLVQAPSGLSEEKDVSESVSLT*VIDEVE
Trigger: TTCCACTTCATCTATGACTCATGTCAGTGACACAGA...CTCTGAAACGTCCTTTTCTTCTGAGAGCCCAGAGGGAGCCTGTACCAGCCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp CTCCTGGACTTCCCATGGCTCCAGAGACAATGCTCGCTGCAGCAGCCACAGCAGGACATCAAAGATGCATaGAAGTTTTCATCAGTGGAA +
Preference number: 4 (lower is better)
Translates to: LLDFPWLQRQCSLQQPQQDIKDA*KFSSVE
Trigger: TTCCACTGATGAAAACTTTCATGCATCTTTGATGTC...CTGCTGTGGCTGCTGCAGCGAGCATTGTCTCTGGAGCCATGGGAAGTCCAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp CCTTCCTTTGAGCTGAGCGGAGGAGGCAACCGGGTCTCTTTAGAGGTCTGGAAGATTTCTAGAGCCTTCTaGAAATGGAGCCTTATCCAC +
Preference number: 4 (lower is better)
Translates to: PSFELSGGGNRVSLEVWKISRAF*KWSLIH
Trigger: GTGGATAAGGCTCCATTTTCAGAAGGCTCTAGAAAT...CTTCCAGACCTCTAAAGAGACCCGGTTGCCTCCTCCGCTCAGCTCAAAGGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp AGGTTTGGCAGTGGCGGAAGACTCATCTTTCTGCGGGGAGAGTGGCTCTTCAGAATGTTCCGGGTTGACTaGTCATCTTCTATCCTAGCT +
Preference number: 4 (lower is better)
Translates to: RFGSGGRLIFLRGEWLFRMFRVD*SSSILA
Trigger: AGCTAGGATAGAAGATGATCAGTCAACCCGGAACAT...TCTGAAGAGCCACTCTCCCCGCAGAAAGATGAGTCTTCCGCCACTGCCAAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp TGCATAACCACTTTAACTCATTCCTCTCATTCTCCTTACACATCTGCATTTCCGGCCCTTCCTTTGAGCTaGGCGGAGGAGGCAACCGGG +
Preference number: 4 (lower is better)
Translates to: CITTLTHSSHSPYTSAFPALPLS*AEEATG
Trigger: CCCGGTTGCCTCCTCCGCTCAGCTCAAAGGAAGGGC...CGGAAATGCAGATGTGTAAGGAGAATGAGAGGAATGAGTTAAAGTGGTTATGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp GGCAGGCTGGTACAGGCTCCCTCTGGGCTCTCAGAAGAAAAGGACGTTTCAGAGCAACACGAAAGCAGCTaGGGCTCTAATATAATCATC +
Preference number: 4 (lower is better)
Translates to: GRLVQAPSGLSEEKDVSEQHESS*GSNIII
Trigger: GATGATTATATTAGAGCCTCAGCTGCTTTCGTGTTG...CTCTGAAACGTCCTTTTCTTCTGAGAGCCCAGAGGGAGCCTGTACCAGCCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTGCTTCATCAGTTACCTaGTTCGAACAAACTCCATTT +
Preference number: 4 (lower is better)
Translates to: CAGPHHRTDDATLGLASAASSVT*FEQTPF
Trigger: AAATGGAGTTTGTTCGAAGCAGGTAACTGATGAAGC...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp CTCCTGGACTTCCCATGGCTCCAGAGACAATGCTCGCTGCAGCAGCCACAGCAGCCAGTGGGAGATTTTTaGCCATGTTTCATTTCTTTA +
Preference number: 4 (lower is better)
Translates to: LLDFPWLQRQCSLQQPQQPVGDF*PCFISL
Trigger: TAAAGAAATGAAACATGGGCAAAAATCTCCCACTGG...CTGCTGTGGCTGCTGCAGCGAGCATTGTCTCTGGAGCCATGGGAAGTCCAGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000592288.6
ENST00000593195.6
CDS-3UTR GCA 90 bp GTTCCTCCCGCCACTGACAGATGTGCTAGTGGATGCTCGAGACTCAGGTTTGGATGCCTTATCCGCAACTaGATTTCTGGGGTAAACTCT +
Preference number: 4 (lower is better)
Translates to: VPPATDRCASGCSRLRFGCLIRN*ISGVNS
Trigger: AGAGTTTACCCCAGAAATGCAGTTGCGGATAAGGCA...TCCAAACCTGAGTCTCGAGCATCCACTAGCACATCTGTCAGTGGCGGGAGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp GGAAGGAATGAACGGAACCACTCCAATGCAATCCCAGCCACTCCTGCTAGTTCAGAAGACTCATCTTTCTaGGGGGAGAGTGGCTCTTCA +
Preference number: 4 (lower is better)
Translates to: GRNERNHSNAIPATPASSEDSSF*GESGSS
Trigger: TGAAGAGCCACTCTCCCCGCAGAAAGATGAGTCTTC...TGAACTAGCAGGAGTGGCTGGGATTGCATTGGAGTGGTTCCGTTCATTCCTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp GTTCCTCCCGCCACTGACAGATGTGCTAGTGGATGCTCGAGACTCAGGTTTGGAAGCTTAGCCTTTGTCTaGTCTTTGATGTGTGCCAGA +
Preference number: 4 (lower is better)
Translates to: VPPATDRCASGCSRLRFGSLAFV*SLMCAR
Trigger: TCTGGCACACATCAAAGAGCAGACAAAGGCTAAGCT...TCCAAACCTGAGTCTCGAGCATCCACTAGCACATCTGTCAGTGGCGGGAGGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp TTACTTGGGTTAAGAGACTGCTGTAGTACAGTGGTGGTCTCCCGGAGGTGGGCAAGGCTCTGGAGAAGCTaGGCTTTTCATGCTTTTTGG +
Preference number: 4 (lower is better)
Translates to: LLGLRDCCSTVVVSRRWARLWRS*AFHAFW
Trigger: CCAAAAAGCATGAAAAGCCCAGCTTCTCCAGAGCCT...TGCCCACCTCCGGGAGACCACCACTGTACTACAGCAGTCTCTTAACCCAAGTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp GGCAGGCTGGTACAGGCTCCCTCTGGGCTCTCAGAAGAAAAGGACGTTTCAGAGAGGGCTCTGATGACTTaGAAGTATGTGAGGTTTCTA +
Preference number: 4 (lower is better)
Translates to: GRLVQAPSGLSEEKDVSERALMT*KYVRFL
Trigger: TAGAAACCTCACATACTTCCAAGTCATCAGAGCCCT...CTCTGAAACGTCCTTTTCTTCTGAGAGCCCAGAGGGAGCCTGTACCAGCCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp CTCCTGGACTTCCCATGGCTCCAGAGACAATGCTCGCTGCAGCAGCCACAGCAGCTTGATTATAAAAGGTaGCCCAATTTTGGAAAGCTG +
Preference number: 4 (lower is better)
Translates to: LLDFPWLQRQCSLQQPQQLDYKR*PNFGKL
Trigger: CAGCTTTCCAAAATTGGGCCACCTTTTATAATCAAG...CTGCTGTGGCTGCTGCAGCGAGCATTGTCTCTGGAGCCATGGGAAGTCCAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp GATGACTTGGAAGTATGTGAGGTTTCTAACCGACTCTGTGTACTCCCTTGCTTATGGGCCCGAGCTTGTTaGGCCCGGGCCTTGATATCT +
Preference number: 4 (lower is better)
Translates to: DDLEVCEVSNRLCVLPCLWARAC*ARALIS
Trigger: AGATATCAAGGCCCGGGCCCAACAAGCTCGGGCCCA...TAAGCAAGGGAGTACACAGAGTCGGTTAGAAACCTCACATACTTCCAAGTCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp CGGAGGTGGGCAGACTTGTTGCTAGGAGATCTACAGTTTGGATTGACAATAATGACTGCTGTAGTACAGTaGTGGTCTCCCGGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: RRWADLLLGDLQFGLTIMTAVVQ*WSPGGG
Trigger: CCCACCTCCGGGAGACCACCACTGTACTACAGCAGT...CATTATTGTCAATCCAAACTGTAGATCTCCTAGCAACAAGTCTGCCCACCTCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp CCTTCCTTTGAGCTGAGCGGAGGAGGCAACCGGGTCTCTTTAGAGGTCTGGAAGGTCAGTGGCAGTTTCTaGAAGTTTACTTGGGTTAAG +
Preference number: 4 (lower is better)
Translates to: PSFELSGGGNRVSLEVWKVSGSF*KFTWVK
Trigger: CTTAACCCAAGTAAACTTCCAGAAACTGCCACTGAC...CTTCCAGACCTCTAAAGAGACCCGGTTGCCTCCTCCGCTCAGCTCAAAGGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTCAATTCTGTTCTGCATaGAGTGCTTGTTTAGCCATT +
Preference number: 4 (lower is better)
Translates to: CAGPHHRTDDATLGLASAQFCSA*SACLAI
Trigger: AATGGCTAAACAAGCACTCCATGCAGAACAGAATTG...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTGAGACAATGACCCAGTaGCCCGGTGACCCGCACTCG +
Preference number: 4 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPETMTQ*PGDPHS
Trigger: CGAGTGCGGGTCACCGGGTCACTGGGTCATTGTCTC...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp GTTCCTCCCGCCACTGACAGATGTGCTAGTGGATGCTCGAGACTCAGGTTTGGAACTTTCCAGGGATTTTaGAGAATGTTCCATCCCCTA +
Preference number: 4 (lower is better)
Translates to: VPPATDRCASGCSRLRFGTFQGF*RMFHPL
Trigger: TAGGGGATGGAACATTCTTCAAAATCCCTGGAAAGT...TCCAAACCTGAGTCTCGAGCATCCACTAGCACATCTGTCAGTGGCGGGAGGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp AGGTTTGGCAGTGGCGGAAGACTCATCTTTCTGCGGGGAGAGTGGCTCTTCAGAACTTTCCAGGGATTTTaGAGAATGTTCCATCCCCTA +
Preference number: 4 (lower is better)
Translates to: RFGSGGRLIFLRGEWLFRTFQGF*RMFHPL
Trigger: TAGGGGATGGAACATTCTTCAAAATCCCTGGAAAGT...TCTGAAGAGCCACTCTCCCCGCAGAAAGATGAGTCTTCCGCCACTGCCAAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp TTACTTGGGTTAAGAGACTGCTGTAGTACAGTGGTGGTCTCCCGGAGGTGGGCATGTGTTAGTAAGGCTTaGATCTCGAGTGGAAGATGC +
Preference number: 4 (lower is better)
Translates to: LLGLRDCCSTVVVSRRWACVSKA*ISSGRC
Trigger: GCATCTTCCACTCGAGATTCAAGCCTTACTAACACA...TGCCCACCTCCGGGAGACCACCACTGTACTACAGCAGTCTCTTAACCCAAGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp AGGTTTGGCAGTGGCGGAAGACTCATCTTTCTGCGGGGAGAGTGGCTCTTCAGATCTGCAATTTCCTCCTaGATTACAGATTCTTCAGGG +
Preference number: 4 (lower is better)
Translates to: RFGSGGRLIFLRGEWLFRSAISS*ITDSSG
Trigger: CCCTGAAGAATCTGTAATTCAGGAGGAAATTGCAGA...TCTGAAGAGCCACTCTCCCCGCAGAAAGATGAGTCTTCCGCCACTGCCAAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTTCAGGTATTGTCTTATaGTTTTCATCCTGGCATTCA +
Preference number: 4 (lower is better)
Translates to: CAGPHHRTDDATLGLASASGIVL*FSSWHS
Trigger: TGAATGCCAGGATGAAAATCATAAGACAATACCTGA...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp GGCAGGCTGGTACAGGCTCCCTCTGGGCTCTCAGAAGAAAAGGACGTTTCAGAGGACATGAGTCATAGATaGAGTGGAAGGAATAAGAGA +
Preference number: 4 (lower is better)
Translates to: GRLVQAPSGLSEEKDVSEDMSHR*SGRNKR
Trigger: TCTCTTATTCCTTCCACTTCATCTATGACTCATGTC...CTCTGAAACGTCCTTTTCTTCTGAGAGCCCAGAGGGAGCCTGTACCAGCCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp TGCTCTTTGATGTGTGCCAGAGTTCTCGTCTTTCCACCCTCTCCTGGACTTCCCGATTTACAGGTTTGCTaGCTCAGGGTCTTATTGTGC +
Preference number: 4 (lower is better)
Translates to: CSLMCARVLVFPPSPGLPDLQVC*LRVLLC
Trigger: GCACAATAAGACCCTGAGTCAGCAAACCTGTAAATC...GGGAAGTCCAGGAGAGGGTGGAAAGACGAGAACTCTGGCACACATCAAAGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp AGCACAGAAACCAGGCTCTGGAGAAGCTGGGCTTTTCATGCTTTTTGGCTGTTGAGCAAGTTCTGGAATTaGAGCAGGGTAGGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: STETRLWRSWAFHAFWLLSKFWN*SRVGLL
Trigger: GAGAAGCCCTACCCTGCTTCAATTCCAGAACTTGCT...CAACAGCCAAAAAGCATGAAAAGCCCAGCTTCTCCAGAGCCTGGTTTCTGTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp AGCACAGAAACCAGGCTCTGGAGAAGCTGGGCTTTTCATGCTTTTTGGCTGTTGTGGAAAGCTGAATCTTaGGAGGGGGAACCCTTGGTT +
Preference number: 4 (lower is better)
Translates to: STETRLWRSWAFHAFWLLWKAES*EGEPLV
Trigger: AACCAAGGGTTCCCCCTCTCAAGATTCAGCTTTCCA...CAACAGCCAAAAAGCATGAAAAGCCCAGCTTCTCCAGAGCCTGGTTTCTGTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACATGGAGGCCCTTCCTTTaGGCTGAGCGGAGGAGGCAA +
Preference number: 4 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTWRPFL*AERRRQ
Trigger: TTGCCTCCTCCGCTCAGCTCAAAGGAAGGGCCTCCA...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp GAATATCCAAGGTCCAGCAGTCAACTAAACTTTCTATATAGCTCATCCCAGAAAGGACAGACGACAGCCTaGGCTCCCTGCACCAGGGAC +
Preference number: 4 (lower is better)
Translates to: EYPRSSSQLNFLYSSSQKGQTTA*APCTRD
Trigger: GTCCCTGGTGCAGGGAGCTCAGGCTGTCGTCTGTCC...TTTCTGGGATGAGCTATATAGAAAGTTTAGTTGACTGCTGGACCTTGGATATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTAAACGCAGATGGACAGTaGCTCTGGGCTCTGCATGCT +
Preference number: 4 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVNADGQ*LWALHA
Trigger: AGCATGCAGAGCCCAGAGTCACTGTCCATCTGCGTT...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp GTTCTCGTCTTTCCACCCTCTCCTGGACTTCCCATGGCTCCAGAGACAATGCTCCTTCTTTTCTGCTGCTaGCTCAAAGCCTGTTTAAGA +
Preference number: 4 (lower is better)
Translates to: VLVFPPSPGLPMAPETMLLLFCC*LKACLR
Trigger: TCTTAAACAGGCTTTGAGGCAGCAGCAGAAAAGAAG...GAGCATTGTCTCTGGAGCCATGGGAAGTCCAGGAGAGGGTGGAAAGACGAGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp GTTCTCGTCTTTCCACCCTCTCCTGGACTTCCCATGGCTCCAGAGACAATGCTCCTGTTTCCACCCTTGTaGTGCATATGCAAAGAATTC +
Preference number: 4 (lower is better)
Translates to: VLVFPPSPGLPMAPETMLLFPPL*CICKEF
Trigger: GAATTCTTTGCATATGCAGCACAAGGGTGGAAACAG...GAGCATTGTCTCTGGAGCCATGGGAAGTCCAGGAGAGGGTGGAAAGACGAGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp CTTTGTCTGCTCTTTGATGTGTGCCAGAGTTCTCGTCTTTCCACCCTCTCCTGGTTTTGGCTGTTGTTCTaGCAAGGCTGTCTGTGCAGA +
Preference number: 4 (lower is better)
Translates to: LCLLFDVCQSSRLSTLSWFWLLF*QGCLCR
Trigger: TCTGCACAGACAGCCTTGGCAGAACAACAGCCAAAA...CCAGGAGAGGGTGGAAAGACGAGAACTCTGGCACACATCAAAGAGCAGACAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp GTTCCTCCCGCCACTGACAGATGTGCTAGTGGATGCTCGAGACTCAGGTTTGGAATCTTCAGACGGAAATaGTTCAGGAGCAATGGAAGA +
Preference number: 4 (lower is better)
Translates to: VPPATDRCASGCSRLRFGIFRRK*FRSNGR
Trigger: TCTTCCATTGCTCCTGAAGCATTTCCGTCTGAAGAT...TCCAAACCTGAGTCTCGAGCATCCACTAGCACATCTGTCAGTGGCGGGAGGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp ATTGACAATAATGACACCAGTCGAACCTTCCATTTTTGTTTCAGGGGTAGAAGAAGCCACAGCAGCAGCTaGAGCAGCCTCTCGCTGGGC +
Preference number: 4 (lower is better)
Translates to: IDNNDTSRTFHFCFRGRRSHSSS*SSLSLG
Trigger: GCCCAGCGAGAGGCTGCTGCAGCTGCTGCTGTGGCT...TCTTCTACCCCTGAAACAAAAATGGAAGGTTCGACTGGTGTCATTATTGTCAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp GGAAGTTTACTTGGGTTAAGAGACTGCTGTAGTACAGTGGTGGTCTCCCGGAGGCTGCTCTTTGATGTGTaGCAGAGTTCTCGTCTTTCC +
Preference number: 4 (lower is better)
Translates to: GSLLGLRDCCSTVVVSRRLLFDV*QSSRLS
Trigger: GGAAAGACGAGAACTCTGGCACACATCAAAGAGCAG...CCTCCGGGAGACCACCACTGTACTACAGCAGTCTCTTAACCCAAGTAAACTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTAGTTTATGGCTGCTGGTaGAAAGCCCCCTGGTGGTTG +
Preference number: 4 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVVYGCW*KAPWWL
Trigger: CAACCACCAGGGGGCTTTGCACCAGCAGCCATAAAC...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTCTGTCCTCACTGGTCTaGCCTGCAGGTCCAAGCTGG +
Preference number: 4 (lower is better)
Translates to: FKKIWPTSARSEARMNGCLSSLV*PAGPSW
Trigger: CCAGCTTGGACCTGCAGGGCAGACCAGTGAGGACAG...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTAAGTGACTCTGGGCTCTaGATGCTCAGGGGGTCATTC +
Preference number: 4 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVSDSGL*MLRGSF
Trigger: GAATGACCCCCTGAGCATGCAGAGCCCAGAGTCACT...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp GGAAGGAATGAACGGAACCACTCCAATGCAATCCCAGCCACTCCTGCTAGTTCACCATTTTCTTCTCCATaGGCATTTGCCTCGGCCATA +
Preference number: 4 (lower is better)
Translates to: GRNERNHSNAIPATPASSPFSSP*AFASAI
Trigger: TATGGCCGAGGCAAATGCCCATGGAGAAGAAAATGG...TGAACTAGCAGGAGTGGCTGGGATTGCATTGGAGTGGTTCCGTTCATTCCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTCTGGAGAAGGCAGGCTaGTACAGGCTCCCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPLEKAG*YRLPLG
Trigger: GCCCAGAGGGAGCCTGTACCAGCCTGCCTTCTCCAG...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp ACTTCCCATCTGCCTATCCACTTCTGGGAGCAAAAGCAGGAGGTATTGTTGAAACTGTGTTTCCCCTCCTaGAGAAGGCAGGCTGGTACA +
Preference number: 4 (lower is better)
Translates to: TSHLPIHFWEQKQEVLLKLCFPS*RRQAGT
Trigger: TGTACCAGCCTGCCTTCTCCAGGAGGGGAAACACAG...TTTCAACAATACCTCCTGCTTTTGCTCCCAGAAGTGGATAGGCAGATGGGAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593195.6
CDS-3UTR CCA 90 bp AGGTTTGGCAGTGGCGGAAGACTCATCTTTCTGCGGGGAGAGTGGCTCTTCAGAAAGGAAGTGGCAAACTaGATACAAAAGTGGTCTCAG +
Preference number: 4 (lower is better)
Translates to: RFGSGGRLIFLRGEWLFRKEVAN*IQKWSQ
Trigger: CTGAGACCACTTTTGTATCCAGTTTGCCACTTCCTT...TCTGAAGAGCCACTCTCCCCGCAGAAAGATGAGTCTTCCGCCACTGCCAAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp GGCTGGTACAGGCTCCCTCTGGGCTCTCAGAAGAAAAGGACGTTTCAGAGATGCAAGGAAGTGGCAAACTaGATACAAAAGTGGTCTCAG +
Preference number: 4 (lower is better)
Translates to: GWYRLPLGSQKKRTFQRCKEVAN*IQKWSQ
Trigger: CTGAGACCACTTTTGTATCCAGTTTGCCACTTCCTT...GCATCTCTGAAACGTCCTTTTCTTCTGAGAGCCCAGAGGGAGCCTGTACCAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp CCTTCCTTTGAGCTGAGCGGAGGAGGCAACCGGGTCTCTTTAGAGGTCTGGAAGCTCAGGTTTGGAGACTaGTTGGCTCTTGATTATAAA +
Preference number: 4 (lower is better)
Translates to: PSFELSGGGNRVSLEVWKLRFGD*LALDYK
Trigger: TTTATAATCAAGAGCCAACCAGTCTCCAAACCTGAG...CTTCCAGACCTCTAAAGAGACCCGGTTGCCTCCTCCGCTCAGCTCAAAGGAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp GGGGTTCTTCATGAGAATTGGTTAGACTTTCAGCCTCCTCAGAAAATTCAGGTATGGGCCCGAGCTTGTTaGGCCCGGGCCTTGATATCT +
Preference number: 4 (lower is better)
Translates to: GVLHENWLDFQPPQKIQVWARAC*ARALIS
Trigger: AGATATCAAGGCCCGGGCCCAACAAGCTCGGGCCCA...TACCTGAATTTTCTGAGGAGGCTGAAAGTCTAACCAATTCTCATGAAGAACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTAGGAGATCTACAGTTTaGATTGACAATAATGACACC +
Preference number: 4 (lower is better)
Translates to: CAGPHHRTDDATLGLASARRSTV*IDNNDT
Trigger: GGTGTCATTATTGTCAATCCAAACTGTAGATCTCCT...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp AACAAAATGTTGTCTCAAGGGAGGCTGGAGTACATGATTCTTCTGATGTGGACTGCTGTAGTACAGTGGTaGTCTCCCGGAGGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: NKMLSQGRLEYMILLMWTAVVQW*SPGGGQ
Trigger: CTGCCCACCTCCGGGAGACCACCACTGTACTACAGC...AGTCCACATCAGAAGAATCATGTACTCCAGCCTCCCTTGAGACAACATTTTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp TCTCTGAATCTCTACTTTCATTTCTTATCCCATCAGGTGACTTGGAGGGCTCTGACTGCTGTAGTACAGTaGTGGTCTCCCGGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: SLNLYFHFLSHQVTWRALTAVVQ*WSPGGG
Trigger: CCCACCTCCGGGAGACCACCACTGTACTACAGCAGT...CAGAGCCCTCCAAGTCACCTGATGGGATAAGAAATGAAAGTAGAGATTCAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp GTTCTCGTCTTTCCACCCTCTCCTGGACTTCCCATGGCTCCAGAGACAATGCTCGTCAGTGGCAGTTTCTaGAAGTTTACTTGGGTTAAG +
Preference number: 4 (lower is better)
Translates to: VLVFPPSPGLPMAPETMLVSGSF*KFTWVK
Trigger: CTTAACCCAAGTAAACTTCCAGAAACTGCCACTGAC...GAGCATTGTCTCTGGAGCCATGGGAAGTCCAGGAGAGGGTGGAAAGACGAGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTAGGGCTGCTCTCACAGTaGTACCCATGGATACAGTGG +
Preference number: 4 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVGLLSQ*YPWIQW
Trigger: CCACTGTATCCATGGGTACCACTGTGAGAGCAGCCC...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp ACAGTGGTGGTCTCCCGGAGGTGGGCAGACTTGTTGCTAGGAGATCTACAGTTTTTAGAGCTGAAGTACTaGGGCGTAAAATTCCATCAC +
Preference number: 4 (lower is better)
Translates to: TVVVSRRWADLLLGDLQFLELKY*GVKFHH
Trigger: GTGATGGAATTTTACGCCTCAGTACTTCAGCTCTAA...AAACTGTAGATCTCCTAGCAACAAGTCTGCCCACCTCCGGGAGACCACCACTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp GCCAGAGTTCTCGTCTTTCCACCCTCTCCTGGACTTCCCATGGCTCCAGAGACATCACAGACTTCTAACTaGTCGATAACAACTGTCATT +
Preference number: 4 (lower is better)
Translates to: ARVLVFPPSPGLPMAPETSQTSN*SITTVI
Trigger: AATGACAGTTGTTATCGATCAGTTAGAAGTCTGTGA...TGTCTCTGGAGCCATGGGAAGTCCAGGAGAGGGTGGAAAGACGAGAACTCTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp TTACTTGGGTTAAGAGACTGCTGTAGTACAGTGGTGGTCTCCCGGAGGTGGGCACTCAGTGTCAACATGTaGTTTACAGGTTTGCTGACT +
Preference number: 4 (lower is better)
Translates to: LLGLRDCCSTVVVSRRWALSVNM*FTGLLT
Trigger: AGTCAGCAAACCTGTAAATCACATGTTGACACTGAG...TGCCCACCTCCGGGAGACCACCACTGTACTACAGCAGTCTCTTAACCCAAGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp GACAGATGTGCTAGTGGATGCTCGAGACTCAGGTTTGGAGACTGGTTGGCTCTTATGTTCCGGGTTGACTaGTCATCTTCTATCCTAGCT +
Preference number: 4 (lower is better)
Translates to: DRCASGCSRLRFGDWLALMFRVD*SSSILA
Trigger: AGCTAGGATAGAAGATGATCAGTCAACCCGGAACAT...AAGAGCCAACCAGTCTCCAAACCTGAGTCTCGAGCATCCACTAGCACATCTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp CCATCAGGTGACTTGGAGGGCTCTGATGACTTGGAAGTATGTGAGGTTTCTAACCCTTTGTCTGCTCTTTaGTGTGTGCCAGAGTTCTCG +
Preference number: 4 (lower is better)
Translates to: PSGDLEGSDDLEVCEVSNPLSAL*CVPEFS
Trigger: CGAGAACTCTGGCACACATCAAAGAGCAGACAAAGG...GTTAGAAACCTCACATACTTCCAAGTCATCAGAGCCCTCCAAGTCACCTGATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp GGCGAATCCGACTGCTCATCAGACACCTTTAATGGTGTCAAAACAACACGAGGACCTTTGTCTGCTCTTTaGTGTGTGCCAGAGTTCTCG +
Preference number: 4 (lower is better)
Translates to: GESDCSSDTFNGVKTTRGPLSAL*CVPEFS
Trigger: CGAGAACTCTGGCACACATCAAAGAGCAGACAAAGG...TCCTCGTGTTGTTTTGACACCATTAAAGGTGTCTGATGAGCAGTCGGATTCGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTACCCACTGAGGTAGTTTaGAGAGGCAATGGAAGCCTG +
Preference number: 4 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVPTEVV*RGNGSL
Trigger: CAGGCTTCCATTGCCTCTTCAAACTACCTCAGTGGG...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTACATATCAGGTTTCCATaGAGCAGGGGAAGGAGGGGA +
Preference number: 4 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVHIRFP*SRGRRG
Trigger: TCCCCTCCTTCCCCTGCTTCATGGAAACCTGATATG...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp TTACTTGGGTTAAGAGACTGCTGTAGTACAGTGGTGGTCTCCCGGAGGTGGGCAATCTCGAGTGGAAGATaGTTCATCAGTTACCTGCTT +
Preference number: 4 (lower is better)
Translates to: LLGLRDCCSTVVVSRRWAISSGR*FISYLL
Trigger: AAGCAGGTAACTGATGAAGCATCTTCCACTCGAGAT...TGCCCACCTCCGGGAGACCACCACTGTACTACAGCAGTCTCTTAACCCAAGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp TACAGTGGTGGTCTCCCGGAGGTGGGCAGACTTGTTGCTAGGAGATCTACAGTTGACACTAACTTGCTTTaGACTGCTGTGTTAGTAAGG +
Preference number: 4 (lower is better)
Translates to: YSGGLPEVGRLVARRSTVDTNLL*TAVLVR
Trigger: CCTTACTAACACAGCAGTGCAAAGCAAGTTAGTGTC...AACTGTAGATCTCCTAGCAACAAGTCTGCCCACCTCCGGGAGACCACCACTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp TGCTGCTGCCTCAAAGCCTGTTTAAGAGCCTTTTTGGTGTGCTGCTGGAAGGAAGCCTTTTTGGTGTGCTaGTGGAAGGAAGACACTAAC +
Preference number: 4 (lower is better)
Translates to: CCCLKACLRAFLVCCWKEAFLVC*WKEDTN
Trigger: GTTAGTGTCTTCCTTCCAGCAGCACACCAAAAAGGC...TTCCTTCCAGCAGCACACCAAAAAGGCTCTTAAACAGGCTTTGAGGCAGCAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp TATGATGGGTTCGGGAGTATTAGACAGATTCTTCTGCTGGGAGGTAAGGTTCTCGGTAAACTCTCCTTCTaGCAGTCGCTGTTTCCACCC +
Preference number: 4 (lower is better)
Translates to: YDGFGSIRQILLLGGKVLGKLSF*QSLFPP
Trigger: GGGTGGAAACAGCGACTGGCAGAAGGAGAGTTTACC...GAGAACCTTACCTCCCAGCAGAAGAATCTGTCTAATACTCCCGAACCCATCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACAAGAGACAATGCTCGCTaGAGCAGCCACAGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTRDNAR*SSHSSS
Trigger: GCTGCTGCTGTGGCTGCTGCAGCGAGCATTGTCTCT...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTAGAGACAATGCTCGCTaGAGCAGCCACAGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: FKKIWPTSARSEARMNGCRDNAR*SSHSSS
Trigger: GCTGCTGCTGTGGCTGCTGCAGCGAGCATTGTCTCT...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp AACAAAATGTTGTCTCAAGGGAGGCTGGAGTACATGATTCTTCTGATGTGGACTTGGCTCCAGAGACAATaGTCGCTGCAGCAGCCACAG +
Preference number: 4 (lower is better)
Translates to: NKMLSQGRLEYMILLMWTWLQRQ*SLQQPQ
Trigger: CTGTGGCTGCTGCAGCGAGCATTGTCTCTGGAGCCA...AGTCCACATCAGAAGAATCATGTACTCCAGCCTCCCTTGAGACAACATTTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp GGCAGGCTGGTACAGGCTCCCTCTGGGCTCTCAGAAGAAAAGGACGTTTCAGAGTTTTCATCAGAACTATaGACAGATAAGTCAGTGGCA +
Preference number: 4 (lower is better)
Translates to: GRLVQAPSGLSEEKDVSEFSSEL*TDKSVA
Trigger: TGCCACTGACTTATCTGTGCATAGTTCTGATGAAAA...CTCTGAAACGTCCTTTTCTTCTGAGAGCCCAGAGGGAGCCTGTACCAGCCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACACTCACTGGTCTGCCCTaGAGGTCCAAGCTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTLTGLP*RSKLAS
Trigger: AGAAGCCAGCTTGGACCTGCAGGGCAGACCAGTGAG...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTCACGGGCTGTACGGATaGCTCTGTCCTCACTGGTCT +
Preference number: 4 (lower is better)
Translates to: FKKIWPTSARSEARMNGCHGLYG*LCPHWS
Trigger: AGACCAGTGAGGACAGAGGCATCCGTACAGCCCGTG...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACAACTCTGGGCTCTGCATaGTCAGGGGGTCATTCCCAC +
Preference number: 4 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTTLGSA*SGGHSH
Trigger: GTGGGAATGACCCCCTGAGCATGCAGAGCCCAGAGT...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp TTACTTGGGTTAAGAGACTGCTGTAGTACAGTGGTGGTCTCCCGGAGGTGGGCATTTTTGGTGTGCTGCTaGAAGGAAGACACTAACTTG +
Preference number: 4 (lower is better)
Translates to: LLGLRDCCSTVVVSRRWAFLVCC*KEDTNL
Trigger: CAAGTTAGTGTCTTCCTTCCAGCAGCACACCAAAAA...TGCCCACCTCCGGGAGACCACCACTGTACTACAGCAGTCTCTTAACCCAAGTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp AGAAACCAGGCTCTGGAGAAGCTGGGCTTTTCATGCTTTTTGGCTGTTGTTCTGCTGCCTATCCACTTCTaGGAGCAAAAGCAGGAGGTA +
Preference number: 4 (lower is better)
Translates to: RNQALEKLGFSCFLAVVLLPIHF*EQKQEV
Trigger: TACCTCCTGCTTTTGCTCCCAGAAGTGGATAGGCAG...CAGAACAACAGCCAAAAAGCATGAAAAGCCCAGCTTCTCCAGAGCCTGGTTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000592288.6
ENST00000593195.6
CDS-3UTR CCA 90 bp CCATCAGGTGACTTGGAGGGCTCTGATGACTTGGAAGTATGTGAGGTTTCTAACGACAGATTCTTCTGCTaGGAGGTAAGGTTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: PSGDLEGSDDLEVCEVSNDRFFC*EVRFSP
Trigger: GGGAGAGAACCTTACCTCCCAGCAGAAGAATCTGTC...GTTAGAAACCTCACATACTTCCAAGTCATCAGAGCCCTCCAAGTCACCTGATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp ACAATGAAGGAACTGATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCGAGAGGGGGAACCCTTaGTTCCTCTCTGGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: TMKELIMSSVSHQPQLYLERGNP*FLSGRL
Trigger: CAGCCTCCCAGAGAGGAACCAAGGGTTCCCCCTCTC...GAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTATCAGTTCCTTCATTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp CCTTCCTTTGAGCTGAGCGGAGGAGGCAACCGGGTCTCTTTAGAGGTCTGGAAGCTTGATTATAAAAGGTaGCCCAATTTTGGAAAGCTG +
Preference number: 4 (lower is better)
Translates to: PSFELSGGGNRVSLEVWKLDYKR*PNFGKL
Trigger: CAGCTTTCCAAAATTGGGCCACCTTTTATAATCAAG...CTTCCAGACCTCTAAAGAGACCCGGTTGCCTCCTCCGCTCAGCTCAAAGGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp TGCATAACCACTTTAACTCATTCCTCTCATTCTCCTTACACATCTGCATTTCCGTATCTGCGAGGGTCCTaGCTCCTGTGTTCCTCCCGC +
Preference number: 4 (lower is better)
Translates to: CITTLTHSSHSPYTSAFPYLRGS*LLCSSR
Trigger: GCGGGAGGAACACAGGAGCCAGGACCCTCGCAGATA...CGGAAATGCAGATGTGTAAGGAGAATGAGAGGAATGAGTTAAAGTGGTTATGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp AAGAGTAGCACAGAAACCAGGCTCTGGAGAAGCTGGGCTTTTCATGCTTTTTGGGTCTCTTTAGAGGTCTaGAAGAGATGGGCTCGAGCT +
Preference number: 4 (lower is better)
Translates to: KSSTETRLWRSWAFHAFWVSLEV*KRWARA
Trigger: AGCTCGAGCCCATCTCTTCCAGACCTCTAAAGAGAC...CCAAAAAGCATGAAAAGCCCAGCTTCTCCAGAGCCTGGTTTCTGTGCTACTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp TCACTCTGTAGCTCCATATCTATAGCAATTCCTTCATTTGGAAACTGGCCTTCTGCTGTAGTACAGTGGTaGTCTCCCGGAGGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: SLCSSISIAIPSFGNWPSAVVQW*SPGGGQ
Trigger: CTGCCCACCTCCGGGAGACCACCACTGTACTACAGC...AGAAGGCCAGTTTCCAAATGAAGGAATTGCTATAGATATGGAGCTACAGAGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACAACTGCTGTAGTACAGTaGTGGTCTCCCGGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTTAVVQ*WSPGGG
Trigger: CCCACCTCCGGGAGACCACCACTGTACTACAGCAGT...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACATCGGTTTATGGCTGCTaGTGCAAAGCCCCCTGGTGG +
Preference number: 4 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTSVYGC*CKAPWW
Trigger: CCACCAGGGGGCTTTGCACCAGCAGCCATAAACCGA...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACATGCCTCTGTCCTCACTaGTCTGCCCTGCAGGTCCAA +
Preference number: 4 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTCLCPH*SALQVQ
Trigger: TTGGACCTGCAGGGCAGACCAGTGAGGACAGAGGCA...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR CAA 72 bp CTGACAGATGTGCTAGTGGATGCTCGAGACTCAGGTTaGGAGACTGGTTGGCTCTTGATTATAAAAGGTGGC +
Preference number: 4 (lower is better)
Translates to: LTDVLVDARDSG*ETGWLLIIKGG
Trigger: GCCACCTTTTATAATCAAGAGCCAACCAGTCTCCAAACCTGAGTCTCGAGCATCCACTAGCACATCTGTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR CAA 72 bp AGTACAGTGGTGGTCTCCCGGAGGTGGGCAGACTTGTaGCTAGGAGATCTACAGTTTGGATTGACAATAATG +
Preference number: 4 (lower is better)
Translates to: STVVVSRRWADL*LGDLQFGLTIM
Trigger: CATTATTGTCAATCCAAACTGTAGATCTCCTAGCAACAAGTCTGCCCACCTCCGGGAGACCACCACTGTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR CAA 72 bp TGTAGTACAGTGGTGGTCTCCCGGAGGTGGGCAGACTaGTTGCTAGGAGATCTACAGTTTGGATTGACAATA +
Preference number: 4 (lower is better)
Translates to: CSTVVVSRRWAD*LLGDLQFGLTI
Trigger: TATTGTCAATCCAAACTGTAGATCTCCTAGCAACAAGTCTGCCCACCTCCGGGAGACCACCACTGTACTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp AGCACAGAAACCAGGCTCTGGAGAAGCTGGGCTTTTCATGCTTTTTGGCTGTTGTGTGTTAGTAAGGCTTaGATCTCGAGTGGAAGATGC +
Preference number: 4 (lower is better)
Translates to: STETRLWRSWAFHAFWLLCVSKA*ISSGRC
Trigger: GCATCTTCCACTCGAGATTCAAGCCTTACTAACACA...CAACAGCCAAAAAGCATGAAAAGCCCAGCTTCTCCAGAGCCTGGTTTCTGTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTACACAGATTCCTCTCTTaGCATGCCCAGCTTTTCTCC +
Preference number: 4 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVHRFLS*HAQLFS
Trigger: GGAGAAAAGCTGGGCATGTCAAGAGAGGAATCTGTG...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp GCAGTTTCTGGAAGTTTACTTGGGTTAAGAGACTGCTGTAGTACAGTGGTGGTCCACAGATTCCTCTCTTaGCATGCCCAGCTTTTCTCC +
Preference number: 4 (lower is better)
Translates to: AVSGSLLGLRDCCSTVVVHRFLS*HAQLFS
Trigger: GGAGAAAAGCTGGGCATGTCAAGAGAGGAATCTGTG...GACCACCACTGTACTACAGCAGTCTCTTAACCCAAGTAAACTTCCAGAAACTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp AAACTCCATTTTCTTCTCCATGGGCATTTGCCTCGGCCATATCTGTACCATCCAAAGTGGTCTCAGAGGTaGGAAGCATGGAAGACACTG +
Preference number: 4 (lower is better)
Translates to: KLHFLLHGHLPRPYLYHPKWSQR*EAWKTL
Trigger: CAGTGTCTTCCATGCTTCTCACCTCTGAGACCACTT...TGGATGGTACAGATATGGCCGAGGCAAATGCCCATGGAGAAGAAAATGGAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp AGAAACCAGGCTCTGGAGAAGCTGGGCTTTTCATGCTTTTTGGCTGTTGTTCTGCCAATTTTGGAAAGCTaGATCTTGAGAGGGGGAACC +
Preference number: 4 (lower is better)
Translates to: RNQALEKLGFSCFLAVVLPILES*ILRGGT
Trigger: GGTTCCCCCTCTCAAGATTCAGCTTTCCAAAATTGG...CAGAACAACAGCCAAAAAGCATGAAAAGCCCAGCTTCTCCAGAGCCTGGTTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTAGCAATGGAAGCCTGTTaGTTTCAAGCTTGGCTCCCA +
Preference number: 4 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVAMEAC*FQAWLP
Trigger: TGGGAGCCAAGCTTGAAATCAACAGGCTTCCATTGC...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACATGGCTGTGTCCTAGCTaGCTGATGCCGGAACTGATG +
Preference number: 4 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTWLCPS*LMPELM
Trigger: CATCAGTTCCGGCATCAGTCAGCTAGGACACAGCCA...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTGAAAACAGAGCCTCCTaGACTACGGCTGTCCTCTGG +
Preference number: 4 (lower is better)
Translates to: FKKIWPTSARSEARMNGCENRAS*TTAVLW
Trigger: CCAGAGGACAGCCGTAGTTCAGGAGGCTCTGTTTTC...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTATTGTCGCAGTCTTACTaGATCAACTGCTCCCCCTTC +
Preference number: 4 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVLSQSY*INCSPF
Trigger: GAAGGGGGAGCAGTTGATTCAGTAAGACTGCGACAA...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp TTACTTGGGTTAAGAGACTGCTGTAGTACAGTGGTGGTCTCCCGGAGGTGGGCAATGACTTCCAATATCTaGTTTGCTGTCATTGGTGAG +
Preference number: 4 (lower is better)
Translates to: LLGLRDCCSTVVVSRRWAMTSNI*FAVIGE
Trigger: CTCACCAATGACAGCAAAGCAGATATTGGAAGTCAT...TGCCCACCTCCGGGAGACCACCACTGTACTACAGCAGTCTCTTAACCCAAGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp GACAGATGTGCTAGTGGATGCTCGAGACTCAGGTTTGGAGACTGGTTGGCTCTTGTTATCTTCAGGAGGTaGTATTTGGGGTTCTTCATG +
Preference number: 4 (lower is better)
Translates to: DRCASGCSRLRFGDWLALVIFRR*YLGFFM
Trigger: CATGAAGAACCCCAAATAGCACCTCCTGAAGATAAC...AAGAGCCAACCAGTCTCCAAACCTGAGTCTCGAGCATCCACTAGCACATCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp GTTGTTCTGCCAAGGCTGTCTGTGCAGAAACTGGAAGGCCAGAAGTCCCACATGCTCAGGGTCTTATTGTaGAAATCTTCAGACGGAAAT +
Preference number: 4 (lower is better)
Translates to: VVLPRLSVQKLEGQKSHMLRVLL*KSSDGN
Trigger: ATTTCCGTCTGAAGATTTGCACAATAAGACCCTGAG...CATGTGGGACTTCTGGCCTTCCAGTTTCTGCACAGACAGCCTTGGCAGAACAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp GAATATCCAAGGTCCAGCAGTCAACTAAACTTTCTATATAGCTCATCCCAGAAACCGGGCCTTGATATCTaGGAGGGTCCTGGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: EYPRSSSQLNFLYSSSQKPGLDI*EGPGSC
Trigger: ACAGGAGCCAGGACCCTCGCAGATATCAAGGCCCGG...TTTCTGGGATGAGCTATATAGAAAGTTTAGTTGACTGCTGGACCTTGGATATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp AATATATGGAATGTAGCTCAAATACTCAACACGCAGACTTTACTGGATGCACACCCGGGCCTTGATATCTaGGAGGGTCCTGGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: NIWNVAQILNTQTLLDAHPGLDI*EGPGSC
Trigger: ACAGGAGCCAGGACCCTCGCAGATATCAAGGCCCGG...GTGTGCATCCAGTAAAGTCTGCGTGTTGAGTATTTGAGCTACATTCCATATATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp ACAATGAAGGAACTGATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCTGGCTCCAGAGACAATaGTCGCTGCAGCAGCCACAG +
Preference number: 4 (lower is better)
Translates to: TMKELIMSSVSHQPQLYLWLQRQ*SLQQPQ
Trigger: CTGTGGCTGCTGCAGCGAGCATTGTCTCTGGAGCCA...GAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTATCAGTTCCTTCATTGT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp TCACTCTGTAGCTCCATATCTATAGCAATTCCTTCATTTGGAAACTGGCCTTCTTGGCTCCAGAGACAATaGTCGCTGCAGCAGCCACAG +
Preference number: 4 (lower is better)
Translates to: SLCSSISIAIPSFGNWPSWLQRQ*SLQQPQ
Trigger: CTGTGGCTGCTGCAGCGAGCATTGTCTCTGGAGCCA...AGAAGGCCAGTTTCCAAATGAAGGAATTGCTATAGATATGGAGCTACAGAGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp GGCGAATCCGACTGCTCATCAGACACCTTTAATGGTGTCAAAACAACACGAGGACTTGGGTTAAGAGACTaGTGTAGTACAGTGGTGGTC +
Preference number: 4 (lower is better)
Translates to: GESDCSSDTFNGVKTTRGLGLRD*CSTVVV
Trigger: GACCACCACTGTACTACAGCAGTCTCTTAACCCAAG...TCCTCGTGTTGTTTTGACACCATTAAAGGTGTCTGATGAGCAGTCGGATTCGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp GTTCTCGTCTTTCCACCCTCTCCTGGACTTCCCATGGCTCCAGAGACAATGCTCTTTTCATCAGAACTATaGACAGATAAGTCAGTGGCA +
Preference number: 4 (lower is better)
Translates to: VLVFPPSPGLPMAPETMLFSSEL*TDKSVA
Trigger: TGCCACTGACTTATCTGTGCATAGTTCTGATGAAAA...GAGCATTGTCTCTGGAGCCATGGGAAGTCCAGGAGAGGGTGGAAAGACGAGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp GGCTGGTACAGGCTCCCTCTGGGCTCTCAGAAGAAAAGGACGTTTCAGAGATGCTTTTCATCAGAACTATaGACAGATAAGTCAGTGGCA +
Preference number: 4 (lower is better)
Translates to: GWYRLPLGSQKKRTFQRCFSSEL*TDKSVA
Trigger: TGCCACTGACTTATCTGTGCATAGTTCTGATGAAAA...GCATCTCTGAAACGTCCTTTTCTTCTGAGAGCCCAGAGGGAGCCTGTACCAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp TGCATAACCACTTTAACTCATTCCTCTCATTCTCCTTACACATCTGCATTTCCGCTCACTGGTCTGCCCTaGAGGTCCAAGCTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: CITTLTHSSHSPYTSAFPLTGLP*RSKLAS
Trigger: AGAAGCCAGCTTGGACCTGCAGGGCAGACCAGTGAG...CGGAAATGCAGATGTGTAAGGAGAATGAGAGGAATGAGTTAAAGTGGTTATGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp TGTCTTTATACACCTCAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATCTGTCCTCACTGGTCTaGCCTGCAGGTCCAAGCTGG +
Preference number: 4 (lower is better)
Translates to: CLYTPQAYAYLIGGGLGNLSSLV*PAGPSW
Trigger: CCAGCTTGGACCTGCAGGGCAGACCAGTGAGGACAG...ATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTGAGGTGTATAAAGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTCACGGGCTGTACGGATaGCTCTGTCCTCACTGGTCT +
Preference number: 4 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPHGLYG*LCPHWS
Trigger: AGACCAGTGAGGACAGAGGCATCCGTACAGCCCGTG...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTAATTCTCGGAGACTTGTaGAGGTGGCCGGCAATGTTT +
Preference number: 4 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVILGDL*RWPAMF
Trigger: AAACATTGCCGGCCACCTGCACAAGTCTCCGAGAAT...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTTGGTGCCAGAGTCCCTaGCAAGTAGCCCTTACCATC +
Preference number: 4 (lower is better)
Translates to: FKKIWPTSARSEARMNGCWCQSP*QVALTI
Trigger: GATGGTAAGGGCTACTTGGCAGGGACTCTGGCACCA...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTACACTGGAACTTATGCTaGTTTCCTCGGGTAAGGCTG +
Preference number: 4 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVHWNLC*FPRVRL
Trigger: CAGCCTTACCCGAGGAAAGCAGCATAAGTTCCAGTG...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACACCACCGTACAGACGATaGTACCCTAGGCTTGGCTTC +
Preference number: 4 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTPPYRR*YPRLGF
Trigger: GAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGG...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp TATGATGGGTTCGGGAGTATTAGACAGATTCTTCTGCTGGGAGGTAAGGTTCTCGCTGTCTCCAAGCCATaGCGGGGTCTTGTTTCTTTT +
Preference number: 4 (lower is better)
Translates to: YDGFGSIRQILLLGGKVLAVSKP*RGLVSF
Trigger: AAAAGAAACAAGACCCCGGCATGGCTTGGAGACAGC...GAGAACCTTACCTCCCAGCAGAAGAATCTGTCTAATACTCCCGAACCCATCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592541.6
CDS-3UTR CCA 90 bp CTTTGTCTGCTCTTTGATGTGTGCCAGAGTTCTCGTCTTTCCACCCTCTCCTGGTTTTTGGTGTGCTGCTaGAAGGAAGACACTAACTTG +
Preference number: 4 (lower is better)
Translates to: LCLLFDVCQSSRLSTLSWFLVCC*KEDTNL
Trigger: CAAGTTAGTGTCTTCCTTCCAGCAGCACACCAAAAA...CCAGGAGAGGGTGGAAAGACGAGAACTCTGGCACACATCAAAGAGCAGACAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp ACAGTGGTGGTCTCCCGGAGGTGGGCAGACTTGTTGCTAGGAGATCTACAGTTTGACAAGAATAGATCCTaGGGTTTCTATGTCAATGTC +
Preference number: 4 (lower is better)
Translates to: TVVVSRRWADLLLGDLQFDKNRS*GFYVNV
Trigger: GACATTGACATAGAAACCCCAGGATCTATTCTTGTC...AAACTGTAGATCTCCTAGCAACAAGTCTGCCCACCTCCGGGAGACCACCACTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592288.6
ENST00000593195.6
CDS-3UTR CCA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTAAGCTCCAGCGTTGTTTaGTCCAGTAGTGAGCTTCAC +
Preference number: 4 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVSSSVV*SSSELH
Trigger: GTGAAGCTCACTACTGGACCAAACAACGCTGGAGCT...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp AAACTCCATTTTCTTCTCCATGGGCATTTGCCTCGGCCATATCTGTACCATCCATGTCTGTGCAGAAACTaGAAGGCCAGAAGTCCCACA +
Preference number: 4 (lower is better)
Translates to: KLHFLLHGHLPRPYLYHPCLCRN*KARSPT
Trigger: TGTGGGACTTCTGGCCTTCCAGTTTCTGCACAGACA...TGGATGGTACAGATATGGCCGAGGCAAATGCCCATGGAGAAGAAAATGGAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp CCATCAGGTGACTTGGAGGGCTCTGATGACTTGGAAGTATGTGAGGTTTCTAACAGGCTCTGGAGAAGCTaGGCTTTTCATGCTTTTTGG +
Preference number: 4 (lower is better)
Translates to: PSGDLEGSDDLEVCEVSNRLWRS*AFHAFW
Trigger: CCAAAAAGCATGAAAAGCCCAGCTTCTCCAGAGCCT...GTTAGAAACCTCACATACTTCCAAGTCATCAGAGCCCTCCAAGTCACCTGATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp GGCGAATCCGACTGCTCATCAGACACCTTTAATGGTGTCAAAACAACACGAGGAACAGAAACCAGGCTCTaGAGAAGCTGGGCTTTTCAT +
Preference number: 4 (lower is better)
Translates to: GESDCSSDTFNGVKTTRGTETRL*RSWAFH
Trigger: ATGAAAAGCCCAGCTTCTCCAGAGCCTGGTTTCTGT...TCCTCGTGTTGTTTTGACACCATTAAAGGTGTCTGATGAGCAGTCGGATTCGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp TCTTTAGGTGGAATTTCTACCATAGGGCAAAGAGTAGCACAGAAACCAGGCTCTGGTACAGGCTCCCTCTaGGCTCTCAGAAGAAAAGGA +
Preference number: 4 (lower is better)
Translates to: SLGGISTIGQRVAQKPGSGTGSL*ALRRKG
Trigger: TCCTTTTCTTCTGAGAGCCCAGAGGGAGCCTGTACC...AGAGCCTGGTTTCTGTGCTACTCTTTGCCCTATGGTAGAAATTCCACCTAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp AACATCATTCATCATAACACAGGATTCCAAGTTATCTTCAGGAGGTGCTATTTGCTGGAGAAGGCAGGCTaGTACAGGCTCCCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: NIIHHNTGFQVIFRRCYLLEKAG*YRLPLG
Trigger: GCCCAGAGGGAGCCTGTACCAGCCTGCCTTCTCCAG...CAAATAGCACCTCCTGAAGATAACTTGGAATCCTGTGTTATGATGAATGATGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTCTGTGTTTCCCCTCCTaGAGAAGGCAGGCTGGTACA +
Preference number: 4 (lower is better)
Translates to: FKKIWPTSARSEARMNGCLCFPS*RRQAGT
Trigger: TGTACCAGCCTGCCTTCTCCAGGAGGGGAAACACAG...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp TCTCTGAATCTCTACTTTCATTTCTTATCCCATCAGGTGACTTGGAGGGCTCTGTCTCTCCCAGAGGTTTaGCAGTGGCGGAAGACTCAT +
Preference number: 4 (lower is better)
Translates to: SLNLYFHFLSHQVTWRALSLPEV*QWRKTH
Trigger: ATGAGTCTTCCGCCACTGCCAAACCTCTGGGAGAGA...CAGAGCCCTCCAAGTCACCTGATGGGATAAGAAATGAAAGTAGAGATTCAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp ACGTTTCAGAGATGCAGGCATTTTCTGAAAGCTGTTCTTCAGGGTCACTCTGTATCCCATCAGGTGACTTaGAGGGCTCTGATGACTTGG +
Preference number: 4 (lower is better)
Translates to: TFQRCRHFLKAVLQGHSVSHQVT*RALMTW
Trigger: CCAAGTCATCAGAGCCCTCCAAGTCACCTGATGGGA...TACAGAGTGACCCTGAAGAACAGCTTTCAGAAAATGCCTGCATCTCTGAAACGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp CTATTTGGGGTTCTTCATGAGAATTGGTTAGACTTTCAGCCTCCTCAGAAAATTGAGAGGGGGAACCCTTaGTTCCTCTCTGGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: LFGVLHENWLDFQPPQKIERGNP*FLSGRL
Trigger: CAGCCTCCCAGAGAGGAACCAAGGGTTCCCCCTCTC...AATTTTCTGAGGAGGCTGAAAGTCTAACCAATTCTCATGAAGAACCCCAAATAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp GAATATCCAAGGTCCAGCAGTCAACTAAACTTTCTATATAGCTCATCCCAGAAAGAGAGGGGGAACCCTTaGTTCCTCTCTGGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: EYPRSSSQLNFLYSSSQKERGNP*FLSGRL
Trigger: CAGCCTCCCAGAGAGGAACCAAGGGTTCCCCCTCTC...TTTCTGGGATGAGCTATATAGAAAGTTTAGTTGACTGCTGGACCTTGGATATTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp TGCTCTTTGATGTGTGCCAGAGTTCTCGTCTTTCCACCCTCTCCTGGACTTCCCCTCAGGTTTGGAGACTaGTTGGCTCTTGATTATAAA +
Preference number: 4 (lower is better)
Translates to: CSLMCARVLVFPPSPGLPLRFGD*LALDYK
Trigger: TTTATAATCAAGAGCCAACCAGTCTCCAAACCTGAG...GGGAAGTCCAGGAGAGGGTGGAAAGACGAGAACTCTGGCACACATCAAAGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp TGTCTTTATACACCTCAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATTGGGCCCGAGCTTGTTaGGCCCGGGCCTTGATATCT +
Preference number: 4 (lower is better)
Translates to: CLYTPQAYAYLIGGGLGNWARAC*ARALIS
Trigger: AGATATCAAGGCCCGGGCCCAACAAGCTCGGGCCCA...ATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTGAGGTGTATAAAGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp TGTCTTTATACACCTCAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATGCTGTAGTACAGTGGTaGTCTCCCGGAGGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: CLYTPQAYAYLIGGGLGNAVVQW*SPGGGQ
Trigger: CTGCCCACCTCCGGGAGACCACCACTGTACTACAGC...ATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTGAGGTGTATAAAGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp TGCATAACCACTTTAACTCATTCCTCTCATTCTCCTTACACATCTGCATTTCCGTCGGTTTATGGCTGCTaGTGCAAAGCCCCCTGGTGG +
Preference number: 4 (lower is better)
Translates to: CITTLTHSSHSPYTSAFPSVYGC*CKAPWW
Trigger: CCACCAGGGGGCTTTGCACCAGCAGCCATAAACCGA...CGGAAATGCAGATGTGTAAGGAGAATGAGAGGAATGAGTTAAAGTGGTTATGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTAGAATTGATCGGTTTATaGCTGCTGGTGCAAAGCCCC +
Preference number: 4 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVELIGL*LLVQSP
Trigger: GGGGCTTTGCACCAGCAGCCATAAACCGATCAATTC...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTAGTCAGCGTGGTGCTGTaGTCAACGATGACTTTACAC +
Preference number: 4 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVVSVVL*STMTLH
Trigger: GTGTAAAGTCATCGTTGACCACAGCACCACGCTGAC...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp ACAATGAAGGAACTGATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCTGCCTCTGTCCTCACTaGTCTGCCCTGCAGGTCCAA +
Preference number: 4 (lower is better)
Translates to: TMKELIMSSVSHQPQLYLCLCPH*SALQVQ
Trigger: TTGGACCTGCAGGGCAGACCAGTGAGGACAGAGGCA...GAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTATCAGTTCCTTCATTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTAGGAGACTTGTGCAGGTaGCCGGCAATGTTTTACTGT +
Preference number: 4 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVGDLCR*PAMFYC
Trigger: ACAGTAAAACATTGCCGGCCACCTGCACAAGTCTCC...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTAACTACGGCTGTCCTCTaGTATGAGGGTGGCCAAAAT +
Preference number: 4 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVTTAVL*YEGGQN
Trigger: ATTTTGGCCACCCTCATACCAGAGGACAGCCGTAGT...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTACACCACGGAGGAACTaGGAAACCAGAGGCCACGGT +
Preference number: 4 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPTPRRN*ETRGHG
Trigger: ACCGTGGCCTCTGGTTTCCCAGTTCCTCCGTGGTGT...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp TATGATGGGTTCGGGAGTATTAGACAGATTCTTCTGCTGGGAGGTAAGGTTCTCGAGAGCATAGAGGCCTaGCTTTCCAGGGATTTTGAA +
Preference number: 4 (lower is better)
Translates to: YDGFGSIRQILLLGGKVLESIEA*LSRDFE
Trigger: TTCAAAATCCCTGGAAAGTCAGGCCTCTATGCTCTC...GAGAACCTTACCTCCCAGCAGAAGAATCTGTCTAATACTCCCGAACCCATCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp TTCATCCTGGCATTCACAGATACTAGTCTCTACCTCTTCTGCAATTTCCTCCTGCACAGATTCCTCTCTTaGCATGCCCAGCTTTTCTCC +
Preference number: 4 (lower is better)
Translates to: FILAFTDTSLYLFCNFLLHRFLS*HAQLFS
Trigger: GGAGAAAAGCTGGGCATGTCAAGAGAGGAATCTGTG...CAGGAGGAAATTGCAGAAGAGGTAGAGACTAGTATCTGTGAATGCCAGGATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp AAGAGTAGCACAGAAACCAGGCTCTGGAGAAGCTGGGCTTTTCATGCTTTTTGGCATGAAGAACTACTTTaGGCTCCAGCGTTGTTTGGT +
Preference number: 4 (lower is better)
Translates to: KSSTETRLWRSWAFHAFWHEELL*APALFG
Trigger: ACCAAACAACGCTGGAGCTCAAAGTAGTTCTTCATG...CCAAAAAGCATGAAAAGCCCAGCTTCTCCAGAGCCTGGTTTCTGTGCTACTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTACCTGTTTCGAGGCCCTaGATTTTTGTCCAAGCTTTC +
Preference number: 4 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVPVSRP*IFVQAF
Trigger: GAAAGCTTGGACAAAAATTCAGGGCCTCGAAACAGG...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp GAATATCCAAGGTCCAGCAGTCAACTAAACTTTCTATATAGCTCATCCCAGAAACTAATCACAGACACCTaGGGACACGCCACGGGCTGT +
Preference number: 4 (lower is better)
Translates to: EYPRSSSQLNFLYSSSQKLITDT*GHATGC
Trigger: ACAGCCCGTGGCGTGTCCTCAGGTGTCTGTGATTAG...TTTCTGGGATGAGCTATATAGAAAGTTTAGTTGACTGCTGGACCTTGGATATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTTGCTCAGCAAAGTTATaGCTGGGAGCAGTCGGCTCA +
Preference number: 4 (lower is better)
Translates to: FKKIWPTSARSEARMNGCCSAKL*LGAVGS
Trigger: TGAGCCGACTGCTCCCAGTCATAACTTTGCTGAGCA...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACATGTCTGCTTCACTTTTaGAAGGAGCTGGGCCACGTG +
Preference number: 4 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTCLLHF*KELGHV
Trigger: CACGTGGCCCAGCTCCTTTCAAAAGTGAAGCAGACA...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTACCCTTGTCTGCTTCGTaGAGTTCAGATTTCACAGGA +
Preference number: 4 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVPLSAS*SSDFTG
Trigger: TCCTGTGAAATCTGAACTTCACGAAGCAGACAAGGG...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTACTCTTCCATGGGACTTaGGGTGGAAGCTTTCATGTT +
Preference number: 4 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVLFHGT*GGSFHV
Trigger: AACATGAAAGCTTCCACCTCAAGTCCCATGGAAGAG...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACAGCCGCTTTTGCTGTTTaGCCTCAGGGCTGTGAACAA +
Preference number: 4 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTAAFAV*PQGCEQ
Trigger: TTGTTCACAGCCCTGAGGTCAAACAGCAAAAGCGGC...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTGCCGCTTTTGCTGTTTaGCCTCAGGGCTGTGAACAA +
Preference number: 4 (lower is better)
Translates to: FKKIWPTSARSEARMNGCAAFAV*PQGCEQ
Trigger: TTGTTCACAGCCCTGAGGTCAAACAGCAAAAGCGGC...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp TGCATAACCACTTTAACTCATTCCTCTCATTCTCCTTACACATCTGCATTTCCGGAAAACAGAGCCTCCTaGACTACGGCTGTCCTCTGG +
Preference number: 4 (lower is better)
Translates to: CITTLTHSSHSPYTSAFPENRAS*TTAVLW
Trigger: CCAGAGGACAGCCGTAGTTCAGGAGGCTCTGTTTTC...CGGAAATGCAGATGTGTAAGGAGAATGAGAGGAATGAGTTAAAGTGGTTATGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTAACGCAGATGGACAGTaGCTCTGGGCTCTGCATGCT +
Preference number: 4 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPNADGQ*LWALHA
Trigger: AGCATGCAGAGCCCAGAGTCACTGTCCATCTGCGTT...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTGGCTACATAGGCCCCTaGCAGTCTGATTCAGAGTTC +
Preference number: 4 (lower is better)
Translates to: FKKIWPTSARSEARMNGCGYIGP*QSDSEF
Trigger: GAACTCTGAATCAGACTGTCAGGGGCCTATGTAGCC...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp ACGTTTCAGAGATGCAGGCATTTTCTGAAAGCTGTTCTTCAGGGTCACTCTGTATTCAGCATCACCTCATaGCCAACACGAAAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: TFQRCRHFLKAVLQGHSVFSITS*PTRKQL
Trigger: CAGCTGCTTTCGTGTTGGTCATGAGGTGATGCTGAA...TACAGAGTGACCCTGAAGAACAGCTTTCAGAAAATGCCTGCATCTCTGAAACGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp GATGACTTGGAAGTATGTGAGGTTTCTAACCGACTCTGTGTACTCCCTTGCTTACATTTCCGGAAGGAATaGACGGAACCACTCCAATGC +
Preference number: 4 (lower is better)
Translates to: DDLEVCEVSNRLCVLPCLHFRKE*TEPLQC
Trigger: GCATTGGAGTGGTTCCGTTCATTCCTTCCGGAAATG...TAAGCAAGGGAGTACACAGAGTCGGTTAGAAACCTCACATACTTCCAAGTCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTCCATTTCAAGTGCCCTaGAGGCGAATCCGACTGCTC +
Preference number: 4 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPPFQVP*RRIRLL
Trigger: GAGCAGTCGGATTCGCCTTCAGGGCACTTGAAATGG...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681521.1
CDS-3UTR GCA 90 bp GATGACTTGGAAGTATGTGAGGTTTCTAACCGACTCTGTGTACTCCCTTGCTTATTCTCCATGGGCATTTaGCTCGGCCATATCTGTACC +
Preference number: 4 (lower is better)
Translates to: DDLEVCEVSNRLCVLPCLFSMGI*LGHICT
Trigger: GGTACAGATATGGCCGAGGCAAATGCCCATGGAGAA...TAAGCAAGGGAGTACACAGAGTCGGTTAGAAACCTCACATACTTCCAAGTCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp AAGAGTAGCACAGAAACCAGGCTCTGGAGAAGCTGGGCTTTTCATGCTTTTTGGGAAGGCGAATCCGACTaGTCATCAGACACCTTTAAT +
Preference number: 4 (lower is better)
Translates to: KSSTETRLWRSWAFHAFWEGESD*SSDTFN
Trigger: ATTAAAGGTGTCTGATGAGCAGTCGGATTCGCCTTC...CCAAAAAGCATGAAAAGCCCAGCTTCTCCAGAGCCTGGTTTCTGTGCTACTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp GACAGATGTGCTAGTGGATGCTCGAGACTCAGGTTTGGAGACTGGTTGGCTCTTTCCTTCTCAATTTCTTaGCTTATCCGCAACTGCATT +
Preference number: 4 (lower is better)
Translates to: DRCASGCSRLRFGDWLALSFSIS*LIRNCI
Trigger: AATGCAGTTGCGGATAAGGCAAGAAATTGAGAAGGA...AAGAGCCAACCAGTCTCCAAACCTGAGTCTCGAGCATCCACTAGCACATCTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTATTTTGGCTGTTGTTCTaGCAAGGCTGTCTGTGCAGA +
Preference number: 4 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVFWLLF*QGCLCR
Trigger: TCTGCACAGACAGCCTTGGCAGAACAACAGCCAAAA...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp GGAAGGAATGAACGGAACCACTCCAATGCAATCCCAGCCACTCCTGCTAGTTCACTCAGGGTCTTATTGTaGAAATCTTCAGACGGAAAT +
Preference number: 4 (lower is better)
Translates to: GRNERNHSNAIPATPASSLRVLL*KSSDGN
Trigger: ATTTCCGTCTGAAGATTTGCACAATAAGACCCTGAG...TGAACTAGCAGGAGTGGCTGGGATTGCATTGGAGTGGTTCCGTTCATTCCTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp CGGAGGTGGGCAGACTTGTTGCTAGGAGATCTACAGTTTGGATTGACAATAATGAGATGTGCTAGTGGATaGTCGAGACTCAGGTTTGGA +
Preference number: 4 (lower is better)
Translates to: RRWADLLLGDLQFGLTIMRCASG*SRLRFG
Trigger: TCCAAACCTGAGTCTCGAGCATCCACTAGCACATCT...CATTATTGTCAATCCAAACTGTAGATCTCCTAGCAACAAGTCTGCCCACCTCCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp ACAGATACTAGTCTCTACCTCTTCTGCAATTTCCTCCTGAATTACAGATTCTTCAGAGACAATGCTCGCTaGAGCAGCCACAGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: TDTSLYLFCNFLLNYRFFRDNAR*SSHSSS
Trigger: GCTGCTGCTGTGGCTGCTGCAGCGAGCATTGTCTCT...GAAGAATCTGTAATTCAGGAGGAAATTGCAGAAGAGGTAGAGACTAGTATCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp CTATTTGGGGTTCTTCATGAGAATTGGTTAGACTTTCAGCCTCCTCAGAAAATTAGAGACAATGCTCGCTaGAGCAGCCACAGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: LFGVLHENWLDFQPPQKIRDNAR*SSHSSS
Trigger: GCTGCTGCTGTGGCTGCTGCAGCGAGCATTGTCTCT...AATTTTCTGAGGAGGCTGAAAGTCTAACCAATTCTCATGAAGAACCCCAAATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp TGTCTTTATACACCTCAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATTGGCTCCAGAGACAATaGTCGCTGCAGCAGCCACAG +
Preference number: 4 (lower is better)
Translates to: CLYTPQAYAYLIGGGLGNWLQRQ*SLQQPQ
Trigger: CTGTGGCTGCTGCAGCGAGCATTGTCTCTGGAGCCA...ATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTGAGGTGTATAAAGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTACTGCAGCTGAGGGCTaGTCTCACAGTGGTACCCAT +
Preference number: 4 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPTAAEG*SHSGTH
Trigger: ATGGGTACCACTGTGAGAGCAGCCCTCAGCTGCAGT...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTAGGAGCTGGGCCACGTaGCTGCTCAGCAAAGTTATG +
Preference number: 4 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPRSWAT*LLSKVM
Trigger: CATAACTTTGCTGAGCAGGCACGTGGCCCAGCTCCT...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp ACAATGAAGGAACTGATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCTGGTGCCAGAGTCCCTaGCAAGTAGCCCTTACCATC +
Preference number: 4 (lower is better)
Translates to: TMKELIMSSVSHQPQLYLWCQSP*QVALTI
Trigger: GATGGTAAGGGCTACTTGGCAGGGACTCTGGCACCA...GAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTATCAGTTCCTTCATTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp GAATATCCAAGGTCCAGCAGTCAACTAAACTTTCTATATAGCTCATCCCAGAAAGGGAGCAGCCGCTTTTaGTGTTTGACCTCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: EYPRSSSQLNFLYSSSQKGSSRF*CLTSGL
Trigger: CAGCCCTGAGGTCAAACAGCAAAAGCGGCTGCTCCC...TTTCTGGGATGAGCTATATAGAAAGTTTAGTTGACTGCTGGACCTTGGATATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp TGTCTTTATACACCTCAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATGGGAGCAGCCGCTTTTaGTGTTTGACCTCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: CLYTPQAYAYLIGGGLGNGSSRF*CLTSGL
Trigger: CAGCCCTGAGGTCAAACAGCAAAAGCGGCTGCTCCC...ATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTGAGGTGTATAAAGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACAGTTTGGCATTGTGTGTaGAGTGCCTCCCACCTCATC +
Preference number: 4 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTVWHCV*SASHLI
Trigger: GATGAGGTGGGAGGCACTGCACACACAATGCCAAAC...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTATGCCCAGTTCACAGCTaGTGCTTAAACCTTCCTCAA +
Preference number: 4 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVCPVHS*CLNLPQ
Trigger: TTGAGGAAGGTTTAAGCAGCAGCTGTGAACTGGGCA...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp GAATATCCAAGGTCCAGCAGTCAACTAAACTTTCTATATAGCTCATCCCAGAAAACTCTGGGCTCTGCATaGTCAGGGGGTCATTCCCAC +
Preference number: 4 (lower is better)
Translates to: EYPRSSSQLNFLYSSSQKTLGSA*SGGHSH
Trigger: GTGGGAATGACCCCCTGAGCATGCAGAGCCCAGAGT...TTTCTGGGATGAGCTATATAGAAAGTTTAGTTGACTGCTGGACCTTGGATATTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp CTATTTGGGGTTCTTCATGAGAATTGGTTAGACTTTCAGCCTCCTCAGAAAATTGCTGTCTCCAAGCCATaGCGGGGTCTGAAACCAGAC +
Preference number: 4 (lower is better)
Translates to: LFGVLHENWLDFQPPQKIAVSKP*RGLKPD
Trigger: GTCTGGTTTCAGACCCCGGCATGGCTTGGAGACAGC...AATTTTCTGAGGAGGCTGAAAGTCTAACCAATTCTCATGAAGAACCCCAAATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000593195.6
CDS-3UTR CCA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTGTTCTGATGATGACGTaGGGGATTCCACGGGGTGCT +
Preference number: 4 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPVLMMT*GIPRGA
Trigger: AGCACCCCGTGGAATCCCCCACGTCATCATCAGAAC...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTACCATTTTCTTCTCCATaGGCATTTGCCTCGGCCATA +
Preference number: 4 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVPFSSP*AFASAI
Trigger: TATGGCCGAGGCAAATGCCCATGGAGAAGAAAATGG...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp GACAGATGTGCTAGTGGATGCTCGAGACTCAGGTTTGGAGACTGGTTGGCTCTTGACAAGAATAGATCCTaGGGTTTCTATGTCAATGTC +
Preference number: 4 (lower is better)
Translates to: DRCASGCSRLRFGDWLALDKNRS*GFYVNV
Trigger: GACATTGACATAGAAACCCCAGGATCTATTCTTGTC...AAGAGCCAACCAGTCTCCAAACCTGAGTCTCGAGCATCCACTAGCACATCTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592288.6
ENST00000593195.6
CDS-3UTR CCA 90 bp TTCATCCTGGCATTCACAGATACTAGTCTCTACCTCTTCTGCAATTTCCTCCTGCCGCAACTGCATTTCTaGGGTAAACTCTCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: FILAFTDTSLYLFCNFLLPQLHF*GKLSFC
Trigger: GCAGAAGGAGAGTTTACCCCAGAAATGCAGTTGCGG...CAGGAGGAAATTGCAGAAGAGGTAGAGACTAGTATCTGTGAATGCCAGGATGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTAACAGAAACCAGGCTCTaGAGAAGCTGGGCTTTTCAT +
Preference number: 4 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVTETRL*RSWAFH
Trigger: ATGAAAAGCCCAGCTTCTCCAGAGCCTGGTTTCTGT...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp GGAAGTTTACTTGGGTTAAGAGACTGCTGTAGTACAGTGGTGGTCTCCCGGAGGGTTCTTCATGAGAATTaGTTAGACTTTCAGCCTCCT +
Preference number: 4 (lower is better)
Translates to: GSLLGLRDCCSTVVVSRRVLHEN*LDFQPP
Trigger: AGGAGGCTGAAAGTCTAACCAATTCTCATGAAGAAC...CCTCCGGGAGACCACCACTGTACTACAGCAGTCTCTTAACCCAAGTAAACTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACAGGTACAGGCTCCCTCTaGGCTCTCAGAAGAAAAGGA +
Preference number: 4 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTGTGSL*ALRRKG
Trigger: TCCTTTTCTTCTGAGAGCCCAGAGGGAGCCTGTACC...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTCTGTGTTTCCCCTCCTaGAGAAGGCAGGCTGGTACA +
Preference number: 4 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPLCFPS*RRQAGT
Trigger: TGTACCAGCCTGCCTTCTCCAGGAGGGGAAACACAG...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp TCTTTAGGTGGAATTTCTACCATAGGGCAAAGAGTAGCACAGAAACCAGGCTCTCCAGAGGTTTGGCAGTaGCGGAAGACTCATCTTTCT +
Preference number: 4 (lower is better)
Translates to: SLGGISTIGQRVAQKPGSPEVWQ*RKTHLS
Trigger: AGAAAGATGAGTCTTCCGCCACTGCCAAACCTCTGG...AGAGCCTGGTTTCTGTGCTACTCTTTGCCCTATGGTAGAAATTCCACCTAAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp GTTGTTCTGCCAAGGCTGTCTGTGCAGAAACTGGAAGGCCAGAAGTCCCACATGCTTGATTATAAAAGGTaGCCCAATTTTGGAAAGCTG +
Preference number: 4 (lower is better)
Translates to: VVLPRLSVQKLEGQKSHMLDYKR*PNFGKL
Trigger: CAGCTTTCCAAAATTGGGCCACCTTTTATAATCAAG...CATGTGGGACTTCTGGCCTTCCAGTTTCTGCACAGACAGCCTTGGCAGAACAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp ACAGTGGTGGTCTCCCGGAGGTGGGCAGACTTGTTGCTAGGAGATCTACAGTTTAGGAGATCTACAGTTTaGATTGACAATAATGACACC +
Preference number: 4 (lower is better)
Translates to: TVVVSRRWADLLLGDLQFRRSTV*IDNNDT
Trigger: GGTGTCATTATTGTCAATCCAAACTGTAGATCTCCT...AAACTGTAGATCTCCTAGCAACAAGTCTGCCCACCTCCGGGAGACCACCACTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp ACCTTTAATGGTGTCAAAACAACACGAGGAACAGTCTTGTTTACCATCATTGAGGTGGTCTCCCGGAGGTaGGCAGACTTGTTGCTAGGA +
Preference number: 4 (lower is better)
Translates to: TFNGVKTTRGTVLFTIIEVVSRR*ADLLLG
Trigger: TCCTAGCAACAAGTCTGCCCACCTCCGGGAGACCAC...CTCAATGATGGTAAACAAGACTGTTCCTCGTGTTGTTTTGACACCATTAAAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp GAATATCCAAGGTCCAGCAGTCAACTAAACTTTCTATATAGCTCATCCCAGAAAGTGGTCTCCCGGAGGTaGGCAGACTTGTTGCTAGGA +
Preference number: 4 (lower is better)
Translates to: EYPRSSSQLNFLYSSSQKVVSRR*ADLLLG
Trigger: TCCTAGCAACAAGTCTGCCCACCTCCGGGAGACCAC...TTTCTGGGATGAGCTATATAGAAAGTTTAGTTGACTGCTGGACCTTGGATATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp GAATATCCAAGGTCCAGCAGTCAACTAAACTTTCTATATAGCTCATCCCAGAAAACTGCTGTAGTACAGTaGTGGTCTCCCGGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: EYPRSSSQLNFLYSSSQKTAVVQ*WSPGGG
Trigger: CCCACCTCCGGGAGACCACCACTGTACTACAGCAGT...TTTCTGGGATGAGCTATATAGAAAGTTTAGTTGACTGCTGGACCTTGGATATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTTCCGATGGAGGGAGTTaGCACAGAGGTGTACTGAGT +
Preference number: 4 (lower is better)
Translates to: FKKIWPTSARSEARMNGCSDGGS*HRGVLS
Trigger: ACTCAGTACACCTCTGTGCCAACTCCCTCCATCGGA...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp ACAATGAAGGAACTGATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCGGGCTGCTCTCACAGTaGTACCCATGGATACAGTGG +
Preference number: 4 (lower is better)
Translates to: TMKELIMSSVSHQPQLYLGLLSQ*YPWIQW
Trigger: CCACTGTATCCATGGGTACCACTGTGAGAGCAGCCC...GAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTATCAGTTCCTTCATTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTCCTGCAGGTCCAAGCTaGCTTCTGAGCTTTCAACGG +
Preference number: 4 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPPAGPS*LLSFQR
Trigger: CCGTTGAAAGCTCAGAAGCCAGCTTGGACCTGCAGG...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp ACAATGAAGGAACTGATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCACTTTTGAAAGGAGCTaGGCCACGTGCCTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: TMKELIMSSVSHQPQLYLTFERS*ATCLLS
Trigger: GCTGAGCAGGCACGTGGCCCAGCTCCTTTCAAAAGT...GAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTATCAGTTCCTTCATTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTATCCCAATCTGGGCTGTaGCAACACTTTTTCCAAAGG +
Preference number: 4 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVSQSGL*QHFFQR
Trigger: CCTTTGGAAAAAGTGTTGCCACAGCCCAGATTGGGA...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp TGCATAACCACTTTAACTCATTCCTCTCATTCTCCTTACACATCTGCATTTCCGGTAGCCCTTACCATCTaGATTTGGAGAGCTGGGCGG +
Preference number: 4 (lower is better)
Translates to: CITTLTHSSHSPYTSAFPVALTI*IWRAGR
Trigger: CCGCCCAGCTCTCCAAATCCAGATGGTAAGGGCTAC...CGGAAATGCAGATGTGTAAGGAGAATGAGAGGAATGAGTTAAAGTGGTTATGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp ACAATGAAGGAACTGATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCACCCCACTGGGGTCTTaGAAGAGGCCTGTAACAGAG +
Preference number: 4 (lower is better)
Translates to: TMKELIMSSVSHQPQLYLTPLGS*KRPVTE
Trigger: CTCTGTTACAGGCCTCTTCCAAGACCCCAGTGGGGT...GAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTATCAGTTCCTTCATTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACAAGCCTGTGGCAGGATTaGAGCCACTTCCCAAAATCC +
Preference number: 4 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTSLWQD*SHFPKS
Trigger: GGATTTTGGGAAGTGGCTCCAATCCTGCCACAGGCT...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTGACCAGACAAGCCTGTaGCAGGATTGGAGCCACTTC +
Preference number: 4 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPDQTSL*QDWSHF
Trigger: GAAGTGGCTCCAATCCTGCCACAGGCTTGTCTGGTC...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTAAATCCTCTGGGCTTATaGCTATTGGCTGGCCAATTG +
Preference number: 4 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVNPLGL*LLAGQL
Trigger: CAATTGGCCAGCCAATAGCCATAAGCCCAGAGGATT...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTAGAAGCACCAAAATCATaGCTACAGCAGCAGGCCTTT +
Preference number: 4 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVEAPKS*LQQQAF
Trigger: AAAGGCCTGCTGCTGTAGCCATGATTTTGGTGCTTC...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR CAA 72 bp GCTAGTGGATGCTCGAGACTCAGGTTTGGAGACTGGTaGGCTCTTGATTATAAAAGGTGGCCCAATTTTGGA +
Preference number: 4 (lower is better)
Translates to: ASGCSRLRFGDW*ALDYKRWPNFG
Trigger: TCCAAAATTGGGCCACCTTTTATAATCAAGAGCCAACCAGTCTCCAAACCTGAGTCTCGAGCATCCACTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp TCTTTAGGTGGAATTTCTACCATAGGGCAAAGAGTAGCACAGAAACCAGGCTCTGAGAGCATAGAGGCCTaGCTTTCCAGGGATTTTGAA +
Preference number: 4 (lower is better)
Translates to: SLGGISTIGQRVAQKPGSESIEA*LSRDFE
Trigger: TTCAAAATCCCTGGAAAGTCAGGCCTCTATGCTCTC...AGAGCCTGGTTTCTGTGCTACTCTTTGCCCTATGGTAGAAATTCCACCTAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACACACAGATTCCTCTCTTaGCATGCCCAGCTTTTCTCC +
Preference number: 4 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTHRFLS*HAQLFS
Trigger: GGAGAAAAGCTGGGCATGTCAAGAGAGGAATCTGTG...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp GCAGTTTCTGGAAGTTTACTTGGGTTAAGAGACTGCTGTAGTACAGTGGTGGTCCTCTACTGCAGTTTCTaGCTCCTTATGTTCTGTGTC +
Preference number: 4 (lower is better)
Translates to: AVSGSLLGLRDCCSTVVVLYCSF*LLMFCV
Trigger: GACACAGAACATAAGGAGTCAGAAACTGCAGTAGAG...GACCACCACTGTACTACAGCAGTCTCTTAACCCAAGTAAACTTCCAGAAACTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp GACAGATGTGCTAGTGGATGCTCGAGACTCAGGTTTGGAGACTGGTTGGCTCTTGACATCAAAGATGCATaGAAGTTTTCATCAGTGGAA +
Preference number: 4 (lower is better)
Translates to: DRCASGCSRLRFGDWLALDIKDA*KFSSVE
Trigger: TTCCACTGATGAAAACTTTCATGCATCTTTGATGTC...AAGAGCCAACCAGTCTCCAAACCTGAGTCTCGAGCATCCACTAGCACATCTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp AAACTCCATTTTCTTCTCCATGGGCATTTGCCTCGGCCATATCTGTACCATCCAGATTTACAGGTTTGCTaGCTCAGGGTCTTATTGTGC +
Preference number: 4 (lower is better)
Translates to: KLHFLLHGHLPRPYLYHPDLQVC*LRVLLC
Trigger: GCACAATAAGACCCTGAGTCAGCAAACCTGTAAATC...TGGATGGTACAGATATGGCCGAGGCAAATGCCCATGGAGAAGAAAATGGAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp CCATCAGGTGACTTGGAGGGCTCTGATGACTTGGAAGTATGTGAGGTTTCTAACATTTCTAGAGCCTTCTaGAAATGGAGCCTTATCCAC +
Preference number: 4 (lower is better)
Translates to: PSGDLEGSDDLEVCEVSNISRAF*KWSLIH
Trigger: GTGGATAAGGCTCCATTTTCAGAAGGCTCTAGAAAT...GTTAGAAACCTCACATACTTCCAAGTCATCAGAGCCCTCCAAGTCACCTGATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACATGGAAAGCTGAATCTTaGGAGGGGGAACCCTTGGTT +
Preference number: 4 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTWKAES*EGEPLV
Trigger: AACCAAGGGTTCCCCCTCTCAAGATTCAGCTTTCCA...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTCCTTTGTCTGCTCTTTaGTGTGTGCCAGAGTTCTCG +
Preference number: 4 (lower is better)
Translates to: FKKIWPTSARSEARMNGCPLSAL*CVPEFS
Trigger: CGAGAACTCTGGCACACATCAAAGAGCAGACAAAGG...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTCCCCCTGGTGGTTGCTaGGGTTTTCCAGAATTATCT +
Preference number: 4 (lower is better)
Translates to: FKKIWPTSARSEARMNGCPPGGC*GFPELS
Trigger: AGATAATTCTGGAAAACCTCAGCAACCACCAGGGGG...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTATGCTGTGGTCAACGATaGCTTTACACGGAATTGATC +
Preference number: 4 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVCCGQR*LYTELI
Trigger: GATCAATTCCGTGTAAAGTCATCGTTGACCACAGCA...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp ACAATGAAGGAACTGATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCGTCCAAGCTGGCTTCTaGGCTTTCAACGGAGACAGT +
Preference number: 4 (lower is better)
Translates to: TMKELIMSSVSHQPQLYLVQAGF*AFNGDS
Trigger: ACTGTCTCCGTTGAAAGCTCAGAAGCCAGCTTGGAC...GAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTATCAGTTCCTTCATTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTGCAATGGAAGCCTGTTaGTTTCAAGCTTGGCTCCCA +
Preference number: 4 (lower is better)
Translates to: FKKIWPTSARSEARMNGCAMEAC*FQAWLP
Trigger: TGGGAGCCAAGCTTGAAATCAACAGGCTTCCATTGC...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp TGCATAACCACTTTAACTCATTCCTCTCATTCTCCTTACACATCTGCATTTCCGCCCACTGAGGTAGTTTaGAGAGGCAATGGAAGCCTG +
Preference number: 4 (lower is better)
Translates to: CITTLTHSSHSPYTSAFPPTEVV*RGNGSL
Trigger: CAGGCTTCCATTGCCTCTTCAAACTACCTCAGTGGG...CGGAAATGCAGATGTGTAAGGAGAATGAGAGGAATGAGTTAAAGTGGTTATGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTAAACTGCTGTCTGTGTaGGGTACCAGCGTCAGTGTG +
Preference number: 4 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPKLLSV*GTSVSV
Trigger: CACACTGACGCTGGTACCTCACACAGACAGCAGTTT...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTAGTTCAAGATGCCTGTTaGAGGCAAATGCATTACACC +
Preference number: 4 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVVQDAC*RQMHYT
Trigger: GGTGTAATGCATTTGCCTTCAACAGGCATCTTGAAC...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTATACAGTGACAAAGCATaGAGACTGAAGACGACAGGA +
Preference number: 4 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVYSDKA*RLKTTG
Trigger: TCCTGTCGTCTTCAGTCTTCATGCTTTGTCACTGTA...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp GACAGATGTGCTAGTGGATGCTCGAGACTCAGGTTTGGAGACTGGTTGGCTCTTACTTCCCATCTTTCATaGCATCTTGATTTCATGACA +
Preference number: 4 (lower is better)
Translates to: DRCASGCSRLRFGDWLALTSHLS*HLDFMT
Trigger: TGTCATGAAATCAAGATGTCATGAAAGATGGGAAGT...AAGAGCCAACCAGTCTCCAAACCTGAGTCTCGAGCATCCACTAGCACATCTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592288.6
CDS-3UTR GCA 90 bp GACAGATGTGCTAGTGGATGCTCGAGACTCAGGTTTGGAGACTGGTTGGCTCTTCTTGTCTTTCATGTTTaGATCTCATTGATGGTTCTG +
Preference number: 4 (lower is better)
Translates to: DRCASGCSRLRFGDWLALLVFHV*ISLMVL
Trigger: CAGAACCATCAATGAGATGCAAACATGAAAGACAAG...AAGAGCCAACCAGTCTCCAAACCTGAGTCTCGAGCATCCACTAGCACATCTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592288.6
CDS-3UTR GCA 90 bp GATGACTTGGAAGTATGTGAGGTTTCTAACCGACTCTGTGTACTCCCTTGCTTAGCCTTTTTGGTGTGCTaGTGGAAGGAAGACACTAAC +
Preference number: 4 (lower is better)
Translates to: DDLEVCEVSNRLCVLPCLAFLVC*WKEDTN
Trigger: GTTAGTGTCTTCCTTCCAGCAGCACACCAAAAAGGC...TAAGCAAGGGAGTACACAGAGTCGGTTAGAAACCTCACATACTTCCAAGTCATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTAGAAGGCGAATCCGACTaGTCATCAGACACCTTTAAT +
Preference number: 4 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVEGESD*SSDTFN
Trigger: ATTAAAGGTGTCTGATGAGCAGTCGGATTCGCCTTC...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp GACAGATGTGCTAGTGGATGCTCGAGACTCAGGTTTGGAGACTGGTTGGCTCTTTTTCCACCCTTGTGCTaGATATGCAAAGAATTCATT +
Preference number: 4 (lower is better)
Translates to: DRCASGCSRLRFGDWLALFPPLC*ICKEFI
Trigger: AATGAATTCTTTGCATATGCAGCACAAGGGTGGAAA...AAGAGCCAACCAGTCTCCAAACCTGAGTCTCGAGCATCCACTAGCACATCTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp GCTCATCAGACACCTTTAATGGTGTCAAAACAACACGAGGAACAGTCTTGTTTAGGTAAACTCTCCTTCTaGCAGTCGCTGTTTCCACCC +
Preference number: 4 (lower is better)
Translates to: AHQTPLMVSKQHEEQSCLGKLSF*QSLFPP
Trigger: GGGTGGAAACAGCGACTGGCAGAAGGAGAGTTTACC...TAAACAAGACTGTTCCTCGTGTTGTTTTGACACCATTAAAGGTGTCTGATGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp TATGATGGGTTCGGGAGTATTAGACAGATTCTTCTGCTGGGAGGTAAGGTTCTCTGCCTTATCCGCAACTaGATTTCTGGGGTAAACTCT +
Preference number: 4 (lower is better)
Translates to: YDGFGSIRQILLLGGKVLCLIRN*ISGVNS
Trigger: AGAGTTTACCCCAGAAATGCAGTTGCGGATAAGGCA...GAGAACCTTACCTCCCAGCAGAAGAATCTGTCTAATACTCCCGAACCCATCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACAGAAGACTCATCTTTCTaGGGGGAGAGTGGCTCTTCA +
Preference number: 4 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTEDSSF*GESGSS
Trigger: TGAAGAGCCACTCTCCCCGCAGAAAGATGAGTCTTC...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp AGAAACCAGGCTCTGGAGAAGCTGGGCTTTTCATGCTTTTTGGCTGTTGTTCTGTTAGACAGATTCTTCTaGTGGGAGGTAAGGTTCTCT +
Preference number: 4 (lower is better)
Translates to: RNQALEKLGFSCFLAVVLLDRFF*WEVRFS
Trigger: AGAGAACCTTACCTCCCAGCAGAAGAATCTGTCTAA...CAGAACAACAGCCAAAAAGCATGAAAAGCCCAGCTTCTCCAGAGCCTGGTTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp AGCACAGAAACCAGGCTCTGGAGAAGCTGGGCTTTTCATGCTTTTTGGCTGTTGCTCAGGGTCTTATTGTaGAAATCTTCAGACGGAAAT +
Preference number: 4 (lower is better)
Translates to: STETRLWRSWAFHAFWLLLRVLL*KSSDGN
Trigger: ATTTCCGTCTGAAGATTTGCACAATAAGACCCTGAG...CAACAGCCAAAAAGCATGAAAAGCCCAGCTTCTCCAGAGCCTGGTTTCTGTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp GATGACTTGGAAGTATGTGAGGTTTCTAACCGACTCTGTGTACTCCCTTGCTTAAGATGTGCTAGTGGATaGTCGAGACTCAGGTTTGGA +
Preference number: 4 (lower is better)
Translates to: DDLEVCEVSNRLCVLPCLRCASG*SRLRFG
Trigger: TCCAAACCTGAGTCTCGAGCATCCACTAGCACATCT...TAAGCAAGGGAGTACACAGAGTCGGTTAGAAACCTCACATACTTCCAAGTCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp TGTCTTTATACACCTCAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATACTGCAGCTGAGGGCTaGTCTCACAGTGGTACCCAT +
Preference number: 4 (lower is better)
Translates to: CLYTPQAYAYLIGGGLGNTAAEG*SHSGTH
Trigger: ATGGGTACCACTGTGAGAGCAGCCCTCAGCTGCAGT...ATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTGAGGTGTATAAAGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp TGTCTTTATACACCTCAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATGTTTATGGCTGCTGGTaGAAAGCCCCCTGGTGGTTG +
Preference number: 4 (lower is better)
Translates to: CLYTPQAYAYLIGGGLGNVYGCW*KAPWWL
Trigger: CAACCACCAGGGGGCTTTGCACCAGCAGCCATAAAC...ATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTGAGGTGTATAAAGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp TGTCTTTATACACCTCAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGGAGCTGGGCCACGTaGCTGCTCAGCAAAGTTATG +
Preference number: 4 (lower is better)
Translates to: CLYTPQAYAYLIGGGLGNRSWAT*LLSKVM
Trigger: CATAACTTTGCTGAGCAGGCACGTGGCCCAGCTCCT...ATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTGAGGTGTATAAAGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTACCCTTCTGTTCAAGATaGCTGTTGAAGGCAAATGCA +
Preference number: 4 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVPFCSR*LLKANA
Trigger: TGCATTTGCCTTCAACAGGCATCTTGAACAGAAGGG...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACAATCAGATGGGACTTCTaGATTAGGGAGAGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTIRWDF*IRERWR
Trigger: CCTCCACCTCTCCCTAATGCAGAAGTCCCATCTGAT...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTATCAGATGGGACTTCTaGATTAGGGAGAGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: FKKIWPTSARSEARMNGCIRWDF*IRERWR
Trigger: CCTCCACCTCTCCCTAATGCAGAAGTCCCATCTGAT...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp TGTCTTTATACACCTCAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATCCACCGTACAGACGATaGTACCCTAGGCTTGGCTTC +
Preference number: 4 (lower is better)
Translates to: CLYTPQAYAYLIGGGLGNPPYRR*YPRLGF
Trigger: GAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGG...ATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTGAGGTGTATAAAGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp GAATATCCAAGGTCCAGCAGTCAACTAAACTTTCTATATAGCTCATCCCAGAAAAGTGACTCTGGGCTCTaGATGCTCAGGGGGTCATTC +
Preference number: 4 (lower is better)
Translates to: EYPRSSSQLNFLYSSSQKSDSGL*MLRGSF
Trigger: GAATGACCCCCTGAGCATGCAGAGCCCAGAGTCACT...TTTCTGGGATGAGCTATATAGAAAGTTTAGTTGACTGCTGGACCTTGGATATTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp AATATATGGAATGTAGCTCAAATACTCAACACGCAGACTTTACTGGATGCACACGTTCTGATGATGACGTaGGGGATTCCACGGGGTGCT +
Preference number: 4 (lower is better)
Translates to: NIWNVAQILNTQTLLDAHVLMMT*GIPRGA
Trigger: AGCACCCCGTGGAATCCCCCACGTCATCATCAGAAC...GTGTGCATCCAGTAAAGTCTGCGTGTTGAGTATTTGAGCTACATTCCATATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTACTGTCATTGGTGAGTTaGGGTGTTTTTCTAGTGCCA +
Preference number: 4 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVLSLVS*GVFLVP
Trigger: TGGCACTAGAAAAACACCCCAACTCACCAATGACAG...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp TCTTTAGGTGGAATTTCTACCATAGGGCAAAGAGTAGCACAGAAACCAGGCTCTCCATTTTCTTCTCCATaGGCATTTGCCTCGGCCATA +
Preference number: 4 (lower is better)
Translates to: SLGGISTIGQRVAQKPGSPFSSP*AFASAI
Trigger: TATGGCCGAGGCAAATGCCCATGGAGAAGAAAATGG...AGAGCCTGGTTTCTGTGCTACTCTTTGCCCTATGGTAGAAATTCCACCTAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTTGTCTGTGCAGAAACTaGAAGGCCAGAAGTCCCACA +
Preference number: 4 (lower is better)
Translates to: FKKIWPTSARSEARMNGCCLCRN*KARSPT
Trigger: TGTGGGACTTCTGGCCTTCCAGTTTCTGCACAGACA...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp GATGACTTGGAAGTATGTGAGGTTTCTAACCGACTCTGTGTACTCCCTTGCTTAAGGCTCTGGAGAAGCTaGGCTTTTCATGCTTTTTGG +
Preference number: 4 (lower is better)
Translates to: DDLEVCEVSNRLCVLPCLRLWRS*AFHAFW
Trigger: CCAAAAAGCATGAAAAGCCCAGCTTCTCCAGAGCCT...TAAGCAAGGGAGTACACAGAGTCGGTTAGAAACCTCACATACTTCCAAGTCATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp TTCATCCTGGCATTCACAGATACTAGTCTCTACCTCTTCTGCAATTTCCTCCTGACAGAAACCAGGCTCTaGAGAAGCTGGGCTTTTCAT +
Preference number: 4 (lower is better)
Translates to: FILAFTDTSLYLFCNFLLTETRL*RSWAFH
Trigger: ATGAAAAGCCCAGCTTCTCCAGAGCCTGGTTTCTGT...CAGGAGGAAATTGCAGAAGAGGTAGAGACTAGTATCTGTGAATGCCAGGATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp ACAATGAAGGAACTGATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCGGTACAGGCTCCCTCTaGGCTCTCAGAAGAAAAGGA +
Preference number: 4 (lower is better)
Translates to: TMKELIMSSVSHQPQLYLGTGSL*ALRRKG
Trigger: TCCTTTTCTTCTGAGAGCCCAGAGGGAGCCTGTACC...GAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTATCAGTTCCTTCATTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp AGGTATTGTCTTATGATTTTCATCCTGGCATTCACAGATACTAGTCTCTACCTCCTGTGTTTCCCCTCCTaGAGAAGGCAGGCTGGTACA +
Preference number: 4 (lower is better)
Translates to: RYCLMIFILAFTDTSLYLLCFPS*RRQAGT
Trigger: TGTACCAGCCTGCCTTCTCCAGGAGGGGAAACACAG...GAGGTAGAGACTAGTATCTGTGAATGCCAGGATGAAAATCATAAGACAATACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp TTACTTGGGTTAAGAGACTGCTGTAGTACAGTGGTGGTCTCCCGGAGGTGGGCACATTTATGGAAGAGTTaGAAATTGGAGATGTTTCTG +
Preference number: 4 (lower is better)
Translates to: LLGLRDCCSTVVVSRRWAHLWKS*KLEMFL
Trigger: CAGAAACATCTCCAATTTCCAACTCTTCCATAAATG...TGCCCACCTCCGGGAGACCACCACTGTACTACAGCAGTCTCTTAACCCAAGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp TGCATAACCACTTTAACTCATTCCTCTCATTCTCCTTACACATCTGCATTTCCGTCTCTCCCAGAGGTTTaGCAGTGGCGGAAGACTCAT +
Preference number: 4 (lower is better)
Translates to: CITTLTHSSHSPYTSAFPSLPEV*QWRKTH
Trigger: ATGAGTCTTCCGCCACTGCCAAACCTCTGGGAGAGA...CGGAAATGCAGATGTGTAAGGAGAATGAGAGGAATGAGTTAAAGTGGTTATGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTAACTGCTTATCATCCATaGAGCTTGATATGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVTAYHP*SLICWS
Trigger: GCTCCAGCATATCAAGCTCCATGGATGATAAGCAGT...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp ACAATGAAGGAACTGATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCTCCGATGGAGGGAGTTaGCACAGAGGTGTACTGAGT +
Preference number: 4 (lower is better)
Translates to: TMKELIMSSVSHQPQLYLSDGGS*HRGVLS
Trigger: ACTCAGTACACCTCTGTGCCAACTCCCTCCATCGGA...GAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTATCAGTTCCTTCATTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACAGCAAATTGTTTCCGATaGAGGGAGTTGGCACAGAGG +
Preference number: 4 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTANCFR*RELAQR
Trigger: CCTCTGTGCCAACTCCCTCCATCGGAAACAATTTGC...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTGCAAATTGTTTCCGATaGAGGGAGTTGGCACAGAGG +
Preference number: 4 (lower is better)
Translates to: FKKIWPTSARSEARMNGCANCFR*RELAQR
Trigger: CCTCTGTGCCAACTCCCTCCATCGGAAACAATTTGC...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTAGCTAGTGGAGAGGTTTaGCAAATTGTTTCCGATGGA +
Preference number: 4 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVASGEV*QIVSDG
Trigger: TCCATCGGAAACAATTTGCCAAACCTCTCCACTAGC...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTGTCAGCGTGGTGCTGTaGTCAACGATGACTTTACAC +
Preference number: 4 (lower is better)
Translates to: FKKIWPTSARSEARMNGCVSVVL*STMTLH
Trigger: GTGTAAAGTCATCGTTGACCACAGCACCACGCTGAC...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTCAGTCAGAGACAAACTaGAGGTCAGCGTGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPQSETN*RSAWCC
Trigger: ACAGCACCACGCTGACCTCCAGTTTGTCTCTGACTG...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp AATATATGGAATGTAGCTCAAATACTCAACACGCAGACTTTACTGGATGCACACCCTGCAGGTCCAAGCTaGCTTCTGAGCTTTCAACGG +
Preference number: 4 (lower is better)
Translates to: NIWNVAQILNTQTLLDAHPAGPS*LLSFQR
Trigger: CCGTTGAAAGCTCAGAAGCCAGCTTGGACCTGCAGG...GTGTGCATCCAGTAAAGTCTGCGTGTTGAGTATTTGAGCTACATTCCATATATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTACCTTCGTTGGCAACTaGCTCAGGCCTGCTAATCAC +
Preference number: 4 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPTFVGN*LRPANH
Trigger: GTGATTAGCAGGCCTGAGCCAGTTGCCAACGAAGGT...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTGATCTATACCTTCGTTaGCAACTGGCTCAGGCCTGC +
Preference number: 4 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPDLYLR*QLAQAC
Trigger: GCAGGCCTGAGCCAGTTGCCAACGAAGGTATAGATC...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTGCTTGGCTCCCAATCTaGGCTGTGGCAACACTTTTT +
Preference number: 4 (lower is better)
Translates to: FKKIWPTSARSEARMNGCAWLPI*AVATLF
Trigger: AAAAAGTGTTGCCACAGCCCAGATTGGGAGCCAAGC...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp GAATATCCAAGGTCCAGCAGTCAACTAAACTTTCTATATAGCTCATCCCAGAAAGTAGCCCTTACCATCTaGATTTGGAGAGCTGGGCGG +
Preference number: 4 (lower is better)
Translates to: EYPRSSSQLNFLYSSSQKVALTI*IWRAGR
Trigger: CCGCCCAGCTCTCCAAATCCAGATGGTAAGGGCTAC...TTTCTGGGATGAGCTATATAGAAAGTTTAGTTGACTGCTGGACCTTGGATATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTGTACCAGCGTCAGTGTaGAAGCCGCCATTCTTGTCA +
Preference number: 4 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPVPASV*KPPFLS
Trigger: TGACAAGAATGGCGGCTTCCACACTGACGCTGGTAC...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp TGTCTTTATACACCTCAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATACCCCACTGGGGTCTTaGAAGAGGCCTGTAACAGAG +
Preference number: 4 (lower is better)
Translates to: CLYTPQAYAYLIGGGLGNTPLGS*KRPVTE
Trigger: CTCTGTTACAGGCCTCTTCCAAGACCCCAGTGGGGT...ATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTGAGGTGTATAAAGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp TGTCTTTATACACCTCAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATGACCAGACAAGCCTGTaGCAGGATTGGAGCCACTTC +
Preference number: 4 (lower is better)
Translates to: CLYTPQAYAYLIGGGLGNDQTSL*QDWSHF
Trigger: GAAGTGGCTCCAATCCTGCCACAGGCTTGTCTGGTC...ATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTGAGGTGTATAAAGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACACTTTGCACACAATCATaGCTTTCAGCCGGCAAGAGC +
Preference number: 4 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTLCTQS*LSAGKS
Trigger: GCTCTTGCCGGCTGAAAGCCATGATTGTGTGCAAAG...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACAACTACGGCTGTCCTCTaGTATGAGGGTGGCCAAAAT +
Preference number: 4 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTTTAVL*YEGGQN
Trigger: ATTTTGGCCACCCTCATACCAGAGGACAGCCGTAGT...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR CAA 72 bp GCCTTTTTGGTGTGCTGCTGGAAGGAAGACACTAACTaGCTTTGCACTGCTGTGTTAGTAAGGCTTGAATCT +
Preference number: 4 (lower is better)
Translates to: AFLVCCWKEDTN*LCTAVLVRLES
Trigger: AGATTCAAGCCTTACTAACACAGCAGTGCAAAGCAAGTTAGTGTCTTCCTTCCAGCAGCACACCAAAAAGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp AGCACAGAAACCAGGCTCTGGAGAAGCTGGGCTTTTCATGCTTTTTGGCTGTTGAATCGTTTTAAGTGCTaGCTTGTTTGTTTTCCAGTG +
Preference number: 4 (lower is better)
Translates to: STETRLWRSWAFHAFWLLNRFKC*LVCFPV
Trigger: CACTGGAAAACAAACAAGTCAGCACTTAAAACGATT...CAACAGCCAAAAAGCATGAAAAGCCCAGCTTCTCCAGAGCCTGGTTTCTGTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000592288.6
ENST00000593195.6
CDS-3UTR TCA 90 bp TGCATAACCACTTTAACTCATTCCTCTCATTCTCCTTACACATCTGCATTTCCGGCCAGAAGTCCCACATaGAGAACTACTTTGAGCTCC +
Preference number: 4 (lower is better)
Translates to: CITTLTHSSHSPYTSAFPARSPT*RTTLSS
Trigger: GGAGCTCAAAGTAGTTCTTCATGTGGGACTTCTGGC...CGGAAATGCAGATGTGTAAGGAGAATGAGAGGAATGAGTTAAAGTGGTTATGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTATCTGCAATTTCCTCCTaGATTACAGATTCTTCAGGG +
Preference number: 4 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVSAISS*ITDSSG
Trigger: CCCTGAAGAATCTGTAATTCAGGAGGAAATTGCAGA...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTATCTGTGTCACTGACATaGGTCATAGATGAAGTGGAA +
Preference number: 4 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVSVSLT*VIDEVE
Trigger: TTCCACTTCATCTATGACTCATGTCAGTGACACAGA...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp ACAATGAAGGAACTGATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCAAGTGGTCTCAGAGGTaGGAAGCATGGAAGACACTG +
Preference number: 4 (lower is better)
Translates to: TMKELIMSSVSHQPQLYLKWSQR*EAWKTL
Trigger: CAGTGTCTTCCATGCTTCTCACCTCTGAGACCACTT...GAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTATCAGTTCCTTCATTGT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp CATTTTCTTCTCCATGGGCATTTGCCTCGGCCATATCTGTACCATCCAATTCAGCTCAGTGTCAACATGTaGTTTACAGGTTTGCTGACT +
Preference number: 4 (lower is better)
Translates to: HFLLHGHLPRPYLYHPIQLSVNM*FTGLLT
Trigger: AGTCAGCAAACCTGTAAATCACATGTTGACACTGAG...CTGAATTGGATGGTACAGATATGGCCGAGGCAAATGCCCATGGAGAAGAAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp CAGGTATGTTTTCATCAGAACTATGCACAGATAAGTCAGTGGCAGTTTCTGGAAAGCAAGTTCTGGAATTaGAGCAGGGTAGGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: QVCFHQNYAQISQWQFLESKFWN*SRVGLL
Trigger: GAGAAGCCCTACCCTGCTTCAATTCCAGAACTTGCT...TTCCAGAAACTGCCACTGACTTATCTGTGCATAGTTCTGATGAAAACATACCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp ACAATGAAGGAACTGATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCAGCAAGTTCTGGAATTaGAGCAGGGTAGGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: TMKELIMSSVSHQPQLYLSKFWN*SRVGLL
Trigger: GAGAAGCCCTACCCTGCTTCAATTCCAGAACTTGCT...GAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTATCAGTTCCTTCATTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTGCCCTCTGTAGTGGCTaGAATGGGAGTGCTTTCAAT +
Preference number: 4 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPALCSG*NGSAFN
Trigger: ATTGAAAGCACTCCCATTTCAGCCACTACAGAGGGC...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACACCTGTTTCGAGGCCCTaGATTTTTGTCCAAGCTTTC +
Preference number: 4 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTPVSRP*IFVQAF
Trigger: GAAAGCTTGGACAAAAATTCAGGGCCTCGAAACAGG...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp TGCATAACCACTTTAACTCATTCCTCTCATTCTCCTTACACATCTGCATTTCCGCCCCCTGGTGGTTGCTaGGGTTTTCCAGAATTATCT +
Preference number: 4 (lower is better)
Translates to: CITTLTHSSHSPYTSAFPPPGGC*GFPELS
Trigger: AGATAATTCTGGAAAACCTCAGCAACCACCAGGGGG...CGGAAATGCAGATGTGTAAGGAGAATGAGAGGAATGAGTTAAAGTGGTTATGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp AATATATGGAATGTAGCTCAAATACTCAACACGCAGACTTTACTGGATGCACACGTCCAAGCTGGCTTCTaGGCTTTCAACGGAGACAGT +
Preference number: 4 (lower is better)
Translates to: NIWNVAQILNTQTLLDAHVQAGF*AFNGDS
Trigger: ACTGTCTCCGTTGAAAGCTCAGAAGCCAGCTTGGAC...GTGTGCATCCAGTAAAGTCTGCGTGTTGAGTATTTGAGCTACATTCCATATATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp ACAATGAAGGAACTGATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCTTACTTGAACCCGAGTaGGTAACCAGAGGCTGTCCT +
Preference number: 4 (lower is better)
Translates to: TMKELIMSSVSHQPQLYLLLEPE*VTRGCP
Trigger: AGGACAGCCTCTGGTTACTCACTCGGGTTCAAGTAA...GAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTATCAGTTCCTTCATTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTTTGACCTCAGGGCTGTaGACAATTCTGTTCTGCATG +
Preference number: 4 (lower is better)
Translates to: FKKIWPTSARSEARMNGCLTSGL*TILFCM
Trigger: CATGCAGAACAGAATTGTTCACAGCCCTGAGGTCAA...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp ACAATGAAGGAACTGATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCGCTAACCTTAGCTGGTaGGGTGCTGAGGAAAGACTA +
Preference number: 4 (lower is better)
Translates to: TMKELIMSSVSHQPQLYLANLSW*GAEERL
Trigger: TAGTCTTTCCTCAGCACCTCACCAGCTAAGGTTAGC...GAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTATCAGTTCCTTCATTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp TGCATAACCACTTTAACTCATTCCTCTCATTCTCCTTACACATCTGCATTTCCGGCTAACCTTAGCTGGTaGGGTGCTGAGGAAAGACTA +
Preference number: 4 (lower is better)
Translates to: CITTLTHSSHSPYTSAFPANLSW*GAEERL
Trigger: TAGTCTTTCCTCAGCACCTCACCAGCTAAGGTTAGC...CGGAAATGCAGATGTGTAAGGAGAATGAGAGGAATGAGTTAAAGTGGTTATGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACACAGATGCTGCCCTTTTaGAACTCGTGCTACCAAAGT +
Preference number: 4 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTQMLPF*NSCYQS
Trigger: ACTTTGGTAGCACGAGTTTCAAAAGGGCAGCATCTG...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTAGGTCTGAAGCCAGAATaGATGGGTGTCATCAATAAA +
Preference number: 4 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVGLKPE*MGVINK
Trigger: TTTATTGATGACACCCATTCATTCTGGCTTCAGACC...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACATCTTCGAAATCAGGATaGTATCAGAGCCAGGCAGAC +
Preference number: 4 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTSSKSG*YQSQAD
Trigger: GTCTGCCTGGCTCTGATATCATCCTGATTTCGAAGA...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTATTGTACCTCACATACTaGGTGCAAAGGTTCTGTAGA +
Preference number: 4 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVLYLTY*VQRFCR
Trigger: TCTACAGAACCTTTGCACTCAGTATGTGAGGTACAA...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp AATATATGGAATGTAGCTCAAATACTCAACACGCAGACTTTACTGGATGCACACGGCTACATAGGCCCCTaGCAGTCTGATTCAGAGTTC +
Preference number: 4 (lower is better)
Translates to: NIWNVAQILNTQTLLDAHGYIGP*QSDSEF
Trigger: GAACTCTGAATCAGACTGTCAGGGGCCTATGTAGCC...GTGTGCATCCAGTAAAGTCTGCGTGTTGAGTATTTGAGCTACATTCCATATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp GAATATCCAAGGTCCAGCAGTCAACTAAACTTTCTATATAGCTCATCCCAGAAACATATCAGGTTTCCATaGAGCAGGGGAAGGAGGGGA +
Preference number: 4 (lower is better)
Translates to: EYPRSSSQLNFLYSSSQKHIRFP*SRGRRG
Trigger: TCCCCTCCTTCCCCTGCTTCATGGAAACCTGATATG...TTTCTGGGATGAGCTATATAGAAAGTTTAGTTGACTGCTGGACCTTGGATATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp TGCATAACCACTTTAACTCATTCCTCTCATTCTCCTTACACATCTGCATTTCCGTTGTCGCAGTCTTACTaGATCAACTGCTCCCCCTTC +
Preference number: 4 (lower is better)
Translates to: CITTLTHSSHSPYTSAFPLSQSY*INCSPF
Trigger: GAAGGGGGAGCAGTTGATTCAGTAAGACTGCGACAA...CGGAAATGCAGATGTGTAAGGAGAATGAGAGGAATGAGTTAAAGTGGTTATGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp CATTTTCTTCTCCATGGGCATTTGCCTCGGCCATATCTGTACCATCCAATTCAGCAACACGAAAGCAGCTaGGGCTCTAATATAATCATC +
Preference number: 4 (lower is better)
Translates to: HFLLHGHLPRPYLYHPIQQHESS*GSNIII
Trigger: GATGATTATATTAGAGCCTCAGCTGCTTTCGTGTTG...CTGAATTGGATGGTACAGATATGGCCGAGGCAAATGCCCATGGAGAAGAAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp TCCTCTGACTCCAATTCTGCCATTATATCTTTAGGTGGAATTTCTACCATAGGGTTCAGCATCACCTCATaGCCAACACGAAAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: SSDSNSAIISLGGISTIGFSITS*PTRKQL
Trigger: CAGCTGCTTTCGTGTTGGTCATGAGGTGATGCTGAA...CCCTATGGTAGAAATTCCACCTAAAGATATAATGGCAGAATTGGAGTCAGAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTAGACTAAATCCAACGTaGCATCTGCTGGGCATGACG +
Preference number: 4 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPRLNPT*HLLGMT
Trigger: CGTCATGCCCAGCAGATGGCACGTTGGATTTAGTCT...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp AAACTCCATTTTCTTCTCCATGGGCATTTGCCTCGGCCATATCTGTACCATCCAATCTCGAGTGGAAGATaGTTCATCAGTTACCTGCTT +
Preference number: 4 (lower is better)
Translates to: KLHFLLHGHLPRPYLYHPISSGR*FISYLL
Trigger: AAGCAGGTAACTGATGAAGCATCTTCCACTCGAGAT...TGGATGGTACAGATATGGCCGAGGCAAATGCCCATGGAGAAGAAAATGGAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp TGTCTTTATACACCTCAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATGGTAAACTCTCCTTCTaGCAGTCGCTGTTTCCACCC +
Preference number: 4 (lower is better)
Translates to: CLYTPQAYAYLIGGGLGNGKLSF*QSLFPP
Trigger: GGGTGGAAACAGCGACTGGCAGAAGGAGAGTTTACC...ATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTGAGGTGTATAAAGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp GAATATCCAAGGTCCAGCAGTCAACTAAACTTTCTATATAGCTCATCCCAGAAAGGTAAACTCTCCTTCTaGCAGTCGCTGTTTCCACCC +
Preference number: 4 (lower is better)
Translates to: EYPRSSSQLNFLYSSSQKGKLSF*QSLFPP
Trigger: GGGTGGAAACAGCGACTGGCAGAAGGAGAGTTTACC...TTTCTGGGATGAGCTATATAGAAAGTTTAGTTGACTGCTGGACCTTGGATATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp TTCATCCTGGCATTCACAGATACTAGTCTCTACCTCTTCTGCAATTTCCTCCTGTGCCTTATCCGCAACTaGATTTCTGGGGTAAACTCT +
Preference number: 4 (lower is better)
Translates to: FILAFTDTSLYLFCNFLLCLIRN*ISGVNS
Trigger: AGAGTTTACCCCAGAAATGCAGTTGCGGATAAGGCA...CAGGAGGAAATTGCAGAAGAGGTAGAGACTAGTATCTGTGAATGCCAGGATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp GGATTGACAATAATGACACCAGTCGAACCTTCCATTTTTGTTTCAGGGGTAGAAGAAGACTCATCTTTCTaGGGGGAGAGTGGCTCTTCA +
Preference number: 4 (lower is better)
Translates to: GLTIMTPVEPSIFVSGVEEDSSF*GESGSS
Trigger: TGAAGAGCCACTCTCCCCGCAGAAAGATGAGTCTTC...TTCTACCCCTGAAACAAAAATGGAAGGTTCGACTGGTGTCATTATTGTCAATCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp AACAAAATGTTGTCTCAAGGGAGGCTGGAGTACATGATTCTTCTGATGTGGACTAGATGTGCTAGTGGATaGTCGAGACTCAGGTTTGGA +
Preference number: 4 (lower is better)
Translates to: NKMLSQGRLEYMILLMWTRCASG*SRLRFG
Trigger: TCCAAACCTGAGTCTCGAGCATCCACTAGCACATCT...AGTCCACATCAGAAGAATCATGTACTCCAGCCTCCCTTGAGACAACATTTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp GGGGTTCTTCATGAGAATTGGTTAGACTTTCAGCCTCCTCAGAAAATTCAGGTACTGCTCTTTGATGTGTaGCAGAGTTCTCGTCTTTCC +
Preference number: 4 (lower is better)
Translates to: GVLHENWLDFQPPQKIQVLLFDV*QSSRLS
Trigger: GGAAAGACGAGAACTCTGGCACACATCAAAGAGCAG...TACCTGAATTTTCTGAGGAGGCTGAAAGTCTAACCAATTCTCATGAAGAACCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACACTTGGGTTAAGAGACTaGTGTAGTACAGTGGTGGTC +
Preference number: 4 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTLGLRD*CSTVVV
Trigger: GACCACCACTGTACTACAGCAGTCTCTTAACCCAAG...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp TGCATAACCACTTTAACTCATTCCTCTCATTCTCCTTACACATCTGCATTTCCGGTTTCCAGTAAACATTaGGACGGTCGGGTGTGCAAC +
Preference number: 4 (lower is better)
Translates to: CITTLTHSSHSPYTSAFPVSSKH*DGRVCN
Trigger: GTTGCACACCCGACCGTCGCAATGTTTACTGGAAAC...CGGAAATGCAGATGTGTAAGGAGAATGAGAGGAATGAGTTAAAGTGGTTATGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp AATATATGGAATGTAGCTCAAATACTCAACACGCAGACTTTACTGGATGCACACCCAGAGGCTGTCCTGTaGTCCTCATCCCATCATCAT +
Preference number: 4 (lower is better)
Translates to: NIWNVAQILNTQTLLDAHPEAVL*SSSHHH
Trigger: ATGATGATGGGATGAGGAGCACAGGACAGCCTCTGG...GTGTGCATCCAGTAAAGTCTGCGTGTTGAGTATTTGAGCTACATTCCATATATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTTTGCCCTGTAGTAACTaGGTCACCAGCGGATTGTTA +
Preference number: 4 (lower is better)
Translates to: FKKIWPTSARSEARMNGCLPCSN*VTSGLL
Trigger: TAACAATCCGCTGGTGACGCAGTTACTACAGGGCAA...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp TGCATAACCACTTTAACTCATTCCTCTCATTCTCCTTACACATCTGCATTTCCGCCTGTTGAAGGCAAATaGATTACACCCCACTGGGGT +
Preference number: 4 (lower is better)
Translates to: CITTLTHSSHSPYTSAFPPVEGK*ITPHWG
Trigger: ACCCCAGTGGGGTGTAATGCATTTGCCTTCAACAGG...CGGAAATGCAGATGTGTAAGGAGAATGAGAGGAATGAGTTAAAGTGGTTATGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTATTCAATTGCAGATGCTaGCCTTTTGAAACTCGTGCT +
Preference number: 4 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVFNCRC*PFETRA
Trigger: AGCACGAGTTTCAAAAGGGCAGCATCTGCAATTGAA...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACAGTTTTGAAGGACCTATaGAGTCGTCATGGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTVLKDL*SRHGRR
Trigger: CCTTCTGCCATGACGACTGCATAGGTCCTTCAAAAC...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp TGCATAACCACTTTAACTCATTCCTCTCATTCTCCTTACACATCTGCATTTCCGCACTGGAACTTATGCTaGTTTCCTCGGGTAAGGCTG +
Preference number: 4 (lower is better)
Translates to: CITTLTHSSHSPYTSAFPHWNLC*FPRVRL
Trigger: CAGCCTTACCCGAGGAAAGCAGCATAAGTTCCAGTG...CGGAAATGCAGATGTGTAAGGAGAATGAGAGGAATGAGTTAAAGTGGTTATGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp TATCTTCAGGAGGTGCTATTTGGGGTTCTTCATGAGAATTGGTTAGACTTTCAGCCGCAACTGCATTTCTaGGGTAAACTCTCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: YLQEVLFGVLHENWLDFQPQLHF*GKLSFC
Trigger: GCAGAAGGAGAGTTTACCCCAGAAATGCAGTTGCGG...CTGAAAGTCTAACCAATTCTCATGAAGAACCCCAAATAGCACCTCCTGAAGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTCCGCAACTGCATTTCTaGGGTAAACTCTCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPPQLHF*GKLSFC
Trigger: GCAGAAGGAGAGTTTACCCCAGAAATGCAGTTGCGG...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTAGCTCCAGCGTTGTTTaGTCCAGTAGTGAGCTTCAC +
Preference number: 4 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPSSSVV*SSSELH
Trigger: GTGAAGCTCACTACTGGACCAAACAACGCTGGAGCT...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACAACAGAAACCAGGCTCTaGAGAAGCTGGGCTTTTCAT +
Preference number: 4 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTTETRL*RSWAFH
Trigger: ATGAAAAGCCCAGCTTCTCCAGAGCCTGGTTTCTGT...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp GGAAGTTTACTTGGGTTAAGAGACTGCTGTAGTACAGTGGTGGTCTCCCGGAGGCATTATATCTTTAGGTaGAATTTCTACCATAGGGCA +
Preference number: 4 (lower is better)
Translates to: GSLLGLRDCCSTVVVSRRHYIFR*NFYHRA
Trigger: TGCCCTATGGTAGAAATTCCACCTAAAGATATAATG...CCTCCGGGAGACCACCACTGTACTACAGCAGTCTCTTAACCCAAGTAAACTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp CCATCAGGTGACTTGGAGGGCTCTGATGACTTGGAAGTATGTGAGGTTTCTAACGTTCTTCATGAGAATTaGTTAGACTTTCAGCCTCCT +
Preference number: 4 (lower is better)
Translates to: PSGDLEGSDDLEVCEVSNVLHEN*LDFQPP
Trigger: AGGAGGCTGAAAGTCTAACCAATTCTCATGAAGAAC...GTTAGAAACCTCACATACTTCCAAGTCATCAGAGCCCTCCAAGTCACCTGATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp ACAATGAAGGAACTGATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCTTTCTGCGGGGAGAGTaGCTCTTCAGATACAGAAGG +
Preference number: 4 (lower is better)
Translates to: TMKELIMSSVSHQPQLYLFLRGE*LFRYRR
Trigger: CCTTCTGTATCTGAAGAGCCACTCTCCCCGCAGAAA...GAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTATCAGTTCCTTCATTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp TGGATTGACAATAATGACACCAGTCGAACCTTCCATTTTTGTTTCAGGGGTAGACCAGAGGTTTGGCAGTaGCGGAAGACTCATCTTTCT +
Preference number: 4 (lower is better)
Translates to: WIDNNDTSRTFHFCFRGRPEVWQ*RKTHLS
Trigger: AGAAAGATGAGTCTTCCGCCACTGCCAAACCTCTGG...TCTACCCCTGAAACAAAAATGGAAGGTTCGACTGGTGTCATTATTGTCAATCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp ACAATGAAGGAACTGATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCCCAGAGGTTTGGCAGTaGCGGAAGACTCATCTTTCT +
Preference number: 4 (lower is better)
Translates to: TMKELIMSSVSHQPQLYLPEVWQ*RKTHLS
Trigger: AGAAAGATGAGTCTTCCGCCACTGCCAAACCTCTGG...GAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTATCAGTTCCTTCATTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp TGCATAACCACTTTAACTCATTCCTCTCATTCTCCTTACACATCTGCATTTCCGGACAGATTCTTCTGCTaGGAGGTAAGGTTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: CITTLTHSSHSPYTSAFPDRFFC*EVRFSP
Trigger: GGGAGAGAACCTTACCTCCCAGCAGAAGAATCTGTC...CGGAAATGCAGATGTGTAAGGAGAATGAGAGGAATGAGTTAAAGTGGTTATGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp TATCTTCAGGAGGTGCTATTTGGGGTTCTTCATGAGAATTGGTTAGACTTTCAGGACAGATTCTTCTGCTaGGAGGTAAGGTTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: YLQEVLFGVLHENWLDFQDRFFC*EVRFSP
Trigger: GGGAGAGAACCTTACCTCCCAGCAGAAGAATCTGTC...CTGAAAGTCTAACCAATTCTCATGAAGAACCCCAAATAGCACCTCCTGAAGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTAAGGGCTCTGATGACTTaGAAGTATGTGAGGTTTCTA +
Preference number: 4 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVRALMT*KYVRFL
Trigger: TAGAAACCTCACATACTTCCAAGTCATCAGAGCCCT...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp GAATATCCAAGGTCCAGCAGTCAACTAAACTTTCTATATAGCTCATCCCAGAAATCCCATCAGGTGACTTaGAGGGCTCTGATGACTTGG +
Preference number: 4 (lower is better)
Translates to: EYPRSSSQLNFLYSSSQKSHQVT*RALMTW
Trigger: CCAAGTCATCAGAGCCCTCCAAGTCACCTGATGGGA...TTTCTGGGATGAGCTATATAGAAAGTTTAGTTGACTGCTGGACCTTGGATATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp AATATATGGAATGTAGCTCAAATACTCAACACGCAGACTTTACTGGATGCACACTCCCATCAGGTGACTTaGAGGGCTCTGATGACTTGG +
Preference number: 4 (lower is better)
Translates to: NIWNVAQILNTQTLLDAHSHQVT*RALMTW
Trigger: CCAAGTCATCAGAGCCCTCCAAGTCACCTGATGGGA...GTGTGCATCCAGTAAAGTCTGCGTGTTGAGTATTTGAGCTACATTCCATATATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp TCACTCTGTAGCTCCATATCTATAGCAATTCCTTCATTTGGAAACTGGCCTTCTGTCTCTTTAGAGGTCTaGAAGAGATGGGCTCGAGCT +
Preference number: 4 (lower is better)
Translates to: SLCSSISIAIPSFGNWPSVSLEV*KRWARA
Trigger: AGCTCGAGCCCATCTCTTCCAGACCTCTAAAGAGAC...AGAAGGCCAGTTTCCAAATGAAGGAATTGCTATAGATATGGAGCTACAGAGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp ACAATGAAGGAACTGATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCGTCTCTTTAGAGGTCTaGAAGAGATGGGCTCGAGCT +
Preference number: 4 (lower is better)
Translates to: TMKELIMSSVSHQPQLYLVSLEV*KRWARA
Trigger: AGCTCGAGCCCATCTCTTCCAGACCTCTAAAGAGAC...GAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTATCAGTTCCTTCATTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp AGCACAGAAACCAGGCTCTGGAGAAGCTGGGCTTTTCATGCTTTTTGGCTGTTGAGGAGATCTACAGTTTaGATTGACAATAATGACACC +
Preference number: 4 (lower is better)
Translates to: STETRLWRSWAFHAFWLLRRSTV*IDNNDT
Trigger: GGTGTCATTATTGTCAATCCAAACTGTAGATCTCCT...CAACAGCCAAAAAGCATGAAAAGCCCAGCTTCTCCAGAGCCTGGTTTCTGTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTAGTTGTTAATTCCCATTaGGGGAATCAAGACAGAGCT +
Preference number: 4 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVVVNSH*GNQDRA
Trigger: AGCTCTGTCTTGATTCCCCCAATGGGAATTAACAAC...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp TGCATAACCACTTTAACTCATTCCTCTCATTCTCCTTACACATCTGCATTTCCGGAATTGATCGGTTTATaGCTGCTGGTGCAAAGCCCC +
Preference number: 4 (lower is better)
Translates to: CITTLTHSSHSPYTSAFPELIGL*LLVQSP
Trigger: GGGGCTTTGCACCAGCAGCCATAAACCGATCAATTC...CGGAAATGCAGATGTGTAAGGAGAATGAGAGGAATGAGTTAAAGTGGTTATGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp AATATATGGAATGTAGCTCAAATACTCAACACGCAGACTTTACTGGATGCACACCAGTCAGAGACAAACTaGAGGTCAGCGTGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: NIWNVAQILNTQTLLDAHQSETN*RSAWCC
Trigger: ACAGCACCACGCTGACCTCCAGTTTGTCTCTGACTG...GTGTGCATCCAGTAAAGTCTGCGTGTTGAGTATTTGAGCTACATTCCATATATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp GAATATCCAAGGTCCAGCAGTCAACTAAACTTTCTATATAGCTCATCCCAGAAAACCTTCGTTGGCAACTaGCTCAGGCCTGCTAATCAC +
Preference number: 4 (lower is better)
Translates to: EYPRSSSQLNFLYSSSQKTFVGN*LRPANH
Trigger: GTGATTAGCAGGCCTGAGCCAGTTGCCAACGAAGGT...TTTCTGGGATGAGCTATATAGAAAGTTTAGTTGACTGCTGGACCTTGGATATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp TGTCTTTATACACCTCAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATGATCTATACCTTCGTTaGCAACTGGCTCAGGCCTGC +
Preference number: 4 (lower is better)
Translates to: CLYTPQAYAYLIGGGLGNDLYLR*QLAQAC
Trigger: GCAGGCCTGAGCCAGTTGCCAACGAAGGTATAGATC...ATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTGAGGTGTATAAAGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp ACAATGAAGGAACTGATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCTCTCGCTTTCTCATTTaGAGTGGTGCCAGAGTCCCT +
Preference number: 4 (lower is better)
Translates to: TMKELIMSSVSHQPQLYLSRFLI*SGARVP
Trigger: AGGGACTCTGGCACCACTCCAAATGAGAAAGCGAGA...GAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTATCAGTTCCTTCATTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACATATGCCCGTGGACTGTaGCCAACTAAGTCTCTTAGT +
Preference number: 4 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTYARGL*PTKSLS
Trigger: ACTAAGAGACTTAGTTGGCCACAGTCCACGGGCATA...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTTATGCCCGTGGACTGTaGCCAACTAAGTCTCTTAGT +
Preference number: 4 (lower is better)
Translates to: FKKIWPTSARSEARMNGCYARGL*PTKSLS
Trigger: ACTAAGAGACTTAGTTGGCCACAGTCCACGGGCATA...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp AATATATGGAATGTAGCTCAAATACTCAACACGCAGACTTTACTGGATGCACACAGCCTGTGGCAGGATTaGAGCCACTTCCCAAAATCC +
Preference number: 4 (lower is better)
Translates to: NIWNVAQILNTQTLLDAHSLWQD*SHFPKS
Trigger: GGATTTTGGGAAGTGGCTCCAATCCTGCCACAGGCT...GTGTGCATCCAGTAAAGTCTGCGTGTTGAGTATTTGAGCTACATTCCATATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp ACAATGAAGGAACTGATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCCACCCCAACACAACCTaGCAGGCAGTGAAGAGAAAA +
Preference number: 4 (lower is better)
Translates to: TMKELIMSSVSHQPQLYLHPNTT*QAVKRK
Trigger: TTTTCTCTTCACTGCCTGCCAGGTTGTGTTGGGGTG...GAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTATCAGTTCCTTCATTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR CAA 72 bp GCTTCGAACAAACTCCATTTTCTTCTCCATGGGCATTaGCCTCGGCCATATCTGTACCATCCAATTCAGATT +
Preference number: 4 (lower is better)
Translates to: ASNKLHFLLHGH*PRPYLYHPIQI
Trigger: AATCTGAATTGGATGGTACAGATATGGCCGAGGCAAATGCCCATGGAGAAGAAAATGGAGTTTGTTCGAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp ACAATGAAGGAACTGATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCGAGAGCATAGAGGCCTaGCTTTCCAGGGATTTTGAA +
Preference number: 4 (lower is better)
Translates to: TMKELIMSSVSHQPQLYLESIEA*LSRDFE
Trigger: TTCAAAATCCCTGGAAAGTCAGGCCTCTATGCTCTC...GAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTATCAGTTCCTTCATTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTGAGAGCATAGAGGCCTaGCTTTCCAGGGATTTTGAA +
Preference number: 4 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPESIEA*LSRDFE
Trigger: TTCAAAATCCCTGGAAAGTCAGGCCTCTATGCTCTC...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp TCTTTAGGTGGAATTTCTACCATAGGGCAAAGAGTAGCACAGAAACCAGGCTCTTTAGAGCTGAAGTACTaGGGCGTAAAATTCCATCAC +
Preference number: 4 (lower is better)
Translates to: SLGGISTIGQRVAQKPGSLELKY*GVKFHH
Trigger: GTGATGGAATTTTACGCCTCAGTACTTCAGCTCTAA...AGAGCCTGGTTTCTGTGCTACTCTTTGCCCTATGGTAGAAATTCCACCTAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp ACCTTTAATGGTGTCAAAACAACACGAGGAACAGTCTTGTTTACCATCATTGAGCACAGATTCCTCTCTTaGCATGCCCAGCTTTTCTCC +
Preference number: 4 (lower is better)
Translates to: TFNGVKTTRGTVLFTIIEHRFLS*HAQLFS
Trigger: GGAGAAAAGCTGGGCATGTCAAGAGAGGAATCTGTG...CTCAATGATGGTAAACAAGACTGTTCCTCGTGTTGTTTTGACACCATTAAAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTCATGAAGAACTACTTTaGGCTCCAGCGTTGTTTGGT +
Preference number: 4 (lower is better)
Translates to: FKKIWPTSARSEARMNGCHEELL*APALFG
Trigger: ACCAAACAACGCTGGAGCTCAAAGTAGTTCTTCATG...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp TTCATCCTGGCATTCACAGATACTAGTCTCTACCTCTTCTGCAATTTCCTCCTGTCTGCAATTTCCTCCTaGATTACAGATTCTTCAGGG +
Preference number: 4 (lower is better)
Translates to: FILAFTDTSLYLFCNFLLSAISS*ITDSSG
Trigger: CCCTGAAGAATCTGTAATTCAGGAGGAAATTGCAGA...CAGGAGGAAATTGCAGAAGAGGTAGAGACTAGTATCTGTGAATGCCAGGATGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp AAGAGTAGCACAGAAACCAGGCTCTGGAGAAGCTGGGCTTTTCATGCTTTTTGGTCACAGACTTCTAACTaGTCGATAACAACTGTCATT +
Preference number: 4 (lower is better)
Translates to: KSSTETRLWRSWAFHAFWSQTSN*SITTVI
Trigger: AATGACAGTTGTTATCGATCAGTTAGAAGTCTGTGA...CCAAAAAGCATGAAAAGCCCAGCTTCTCCAGAGCCTGGTTTCTGTGCTACTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp GATGACTTGGAAGTATGTGAGGTTTCTAACCGACTCTGTGTACTCCCTTGCTTATCTGTGTCACTGACATaGGTCATAGATGAAGTGGAA +
Preference number: 4 (lower is better)
Translates to: DDLEVCEVSNRLCVLPCLSVSLT*VIDEVE
Trigger: TTCCACTTCATCTATGACTCATGTCAGTGACACAGA...TAAGCAAGGGAGTACACAGAGTCGGTTAGAAACCTCACATACTTCCAAGTCATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp GAATATCCAAGGTCCAGCAGTCAACTAAACTTTCTATATAGCTCATCCCAGAAAAAGTGGTCTCAGAGGTaGGAAGCATGGAAGACACTG +
Preference number: 4 (lower is better)
Translates to: EYPRSSSQLNFLYSSSQKKWSQR*EAWKTL
Trigger: CAGTGTCTTCCATGCTTCTCACCTCTGAGACCACTT...TTTCTGGGATGAGCTATATAGAAAGTTTAGTTGACTGCTGGACCTTGGATATTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp GAATATCCAAGGTCCAGCAGTCAACTAAACTTTCTATATAGCTCATCCCAGAAAAGCAAGTTCTGGAATTaGAGCAGGGTAGGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: EYPRSSSQLNFLYSSSQKSKFWN*SRVGLL
Trigger: GAGAAGCCCTACCCTGCTTCAATTCCAGAACTTGCT...TTTCTGGGATGAGCTATATAGAAAGTTTAGTTGACTGCTGGACCTTGGATATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp GGGGTTCTTCATGAGAATTGGTTAGACTTTCAGCCTCCTCAGAAAATTCAGGTAATGTTCCGGGTTGACTaGTCATCTTCTATCCTAGCT +
Preference number: 4 (lower is better)
Translates to: GVLHENWLDFQPPQKIQVMFRVD*SSSILA
Trigger: AGCTAGGATAGAAGATGATCAGTCAACCCGGAACAT...TACCTGAATTTTCTGAGGAGGCTGAAAGTCTAACCAATTCTCATGAAGAACCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTCCAATTTTGGAAAGCTaGATCTTGAGAGGGGGAACC +
Preference number: 4 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPPILES*ILRGGT
Trigger: GGTTCCCCCTCTCAAGATTCAGCTTTCCAAAATTGG...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp TGCATAACCACTTTAACTCATTCCTCTCATTCTCCTTACACATCTGCATTTCCGAGATGGGCTCGAGCTTaGTGCTTTGCAAAGAGCTTA +
Preference number: 4 (lower is better)
Translates to: CITTLTHSSHSPYTSAFPRWARA*CFAKSL
Trigger: TAAGCTCTTTGCAAAGCATCAAGCTCGAGCCCATCT...CGGAAATGCAGATGTGTAAGGAGAATGAGAGGAATGAGTTAAAGTGGTTATGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp GAATATCCAAGGTCCAGCAGTCAACTAAACTTTCTATATAGCTCATCCCAGAAAGCCCTCTGTAGTGGCTaGAATGGGAGTGCTTTCAAT +
Preference number: 4 (lower is better)
Translates to: EYPRSSSQLNFLYSSSQKALCSG*NGSAFN
Trigger: ATTGAAAGCACTCCCATTTCAGCCACTACAGAGGGC...TTTCTGGGATGAGCTATATAGAAAGTTTAGTTGACTGCTGGACCTTGGATATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp GAATATCCAAGGTCCAGCAGTCAACTAAACTTTCTATATAGCTCATCCCAGAAAATCATCCATGGAGCTTaGTATGCTGGAGCCCTCTGT +
Preference number: 4 (lower is better)
Translates to: EYPRSSSQLNFLYSSSQKIIHGA*YAGALC
Trigger: ACAGAGGGCTCCAGCATATCAAGCTCCATGGATGAT...TTTCTGGGATGAGCTATATAGAAAGTTTAGTTGACTGCTGGACCTTGGATATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp TGCATAACCACTTTAACTCATTCCTCTCATTCTCCTTACACATCTGCATTTCCGCTGCCGAAGCAGCAATaGAAGTGGAACTGTGATCTA +
Preference number: 4 (lower is better)
Translates to: CITTLTHSSHSPYTSAFPLPKQQ*KWNCDL
Trigger: TAGATCACAGTTCCACTTTCATTGCTGCTTCGGCAG...CGGAAATGCAGATGTGTAAGGAGAATGAGAGGAATGAGTTAAAGTGGTTATGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp AATATATGGAATGTAGCTCAAATACTCAACACGCAGACTTTACTGGATGCACACTTACTTGAACCCGAGTaGGTAACCAGAGGCTGTCCT +
Preference number: 4 (lower is better)
Translates to: NIWNVAQILNTQTLLDAHLLEPE*VTRGCP
Trigger: AGGACAGCCTCTGGTTACTCACTCGGGTTCAAGTAA...GTGTGCATCCAGTAAAGTCTGCGTGTTGAGTATTTGAGCTACATTCCATATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTATTCTTTTTGTTTACTTaGACCCGAGTGAGTAACCAG +
Preference number: 4 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVFFLFT*TRVSNQ
Trigger: CTGGTTACTCACTCGGGTTCAAGTAAACAAAAAGAA...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp TGTCTTTATACACCTCAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATCCTGGGATGAAGTTCTaGCACGTTCAAGTAGTTGGC +
Preference number: 4 (lower is better)
Translates to: CLYTPQAYAYLIGGGLGNPGMKF*HVQVVG
Trigger: GCCAACTACTTGAACGTGTCAGAACTTCATCCCAGG...ATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTGAGGTGTATAAAGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp ACAATGAAGGAACTGATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCCCCTTGTCTGCTTCGTaGAGTTCAGATTTCACAGGA +
Preference number: 4 (lower is better)
Translates to: TMKELIMSSVSHQPQLYLPLSAS*SSDFTG
Trigger: TCCTGTGAAATCTGAACTTCACGAAGCAGACAAGGG...GAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTATCAGTTCCTTCATTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTCTCTTCCATGGGACTTaGGGTGGAAGCTTTCATGTT +
Preference number: 4 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPLFHGT*GGSFHV
Trigger: AACATGAAAGCTTCCACCTCAAGTCCCATGGAAGAG...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTTTGACCTCAGGGCTGTaGACAATTCTGTTCTGCATG +
Preference number: 4 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPLTSGL*TILFCM
Trigger: CATGCAGAACAGAATTGTTCACAGCCCTGAGGTCAA...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTACTGGAGGTTGTTTTTaGTCAGATGGGACTTCTGCA +
Preference number: 4 (lower is better)
Translates to: FKKIWPTSARSEARMNGCTGGCF*SDGTSA
Trigger: TGCAGAAGTCCCATCTGATCAAAAACAACCTCCAGT...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTCAGATGCTGCCCTTTTaGAACTCGTGCTACCAAAGT +
Preference number: 4 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPQMLPF*NSCYQS
Trigger: ACTTTGGTAGCACGAGTTTCAAAAGGGCAGCATCTG...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACATGCTACACAAAGTTTTaGAGGACCTATGCAGTCGTC +
Preference number: 4 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTCYTKF*RTYAVV
Trigger: GACGACTGCATAGGTCCTTCAAAACTTTGTGTAGCA...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTTGCTACACAAAGTTTTaGAGGACCTATGCAGTCGTC +
Preference number: 4 (lower is better)
Translates to: FKKIWPTSARSEARMNGCCYTKF*RTYAVV
Trigger: GACGACTGCATAGGTCCTTCAAAACTTTGTGTAGCA...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTTTCTGCCATAGTCTCTaGGAAAGTACAACAGGAGGA +
Preference number: 4 (lower is better)
Translates to: FKKIWPTSARSEARMNGCFCHSL*ESTTGG
Trigger: TCCTCCTGTTGTACTTTCTCAGAGACTATGGCAGAA...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACATTCTGCCATAGTCTCTaGGAAAGTACAACAGGAGGA +
Preference number: 4 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTFCHSL*ESTTGG
Trigger: TCCTCCTGTTGTACTTTCTCAGAGACTATGGCAGAA...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp AATATATGGAATGTAGCTCAAATACTCAACACGCAGACTTTACTGGATGCACACCCAGATTGCTGGGCATaGGTCCCATGCAATTTCAGA +
Preference number: 4 (lower is better)
Translates to: NIWNVAQILNTQTLLDAHPDCWA*VPCNFR
Trigger: TCTGAAATTGCATGGGACTCATGCCCAGCAATCTGG...GTGTGCATCCAGTAAAGTCTGCGTGTTGAGTATTTGAGCTACATTCCATATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp GAATATCCAAGGTCCAGCAGTCAACTAAACTTTCTATATAGCTCATCCCAGAAAAACCTCTGCAAGGTCTaGAGCCAGAATGAATGGGTG +
Preference number: 4 (lower is better)
Translates to: EYPRSSSQLNFLYSSSQKNLCKV*SQNEWV
Trigger: CACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTT...TTTCTGGGATGAGCTATATAGAAAGTTTAGTTGACTGCTGGACCTTGGATATTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp AATATATGGAATGTAGCTCAAATACTCAACACGCAGACTTTACTGGATGCACACAACCTCTGCAAGGTCTaGAGCCAGAATGAATGGGTG +
Preference number: 4 (lower is better)
Translates to: NIWNVAQILNTQTLLDAHNLCKV*SQNEWV
Trigger: CACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTT...GTGTGCATCCAGTAAAGTCTGCGTGTTGAGTATTTGAGCTACATTCCATATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp TGTCTTTATACACCTCAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATGGCTGTCCTCTGGTATaGGGGTGGCCAAAATATATG +
Preference number: 4 (lower is better)
Translates to: CLYTPQAYAYLIGGGLGNGCPLV*GWPKYM
Trigger: CATATATTTTGGCCACCCTCATACCAGAGGACAGCC...ATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTGAGGTGTATAAAGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp AATATATGGAATGTAGCTCAAATACTCAACACGCAGACTTTACTGGATGCACACGGCTGTCCTCTGGTATaGGGGTGGCCAAAATATATG +
Preference number: 4 (lower is better)
Translates to: NIWNVAQILNTQTLLDAHGCPLV*GWPKYM
Trigger: CATATATTTTGGCCACCCTCATACCAGAGGACAGCC...GTGTGCATCCAGTAAAGTCTGCGTGTTGAGTATTTGAGCTACATTCCATATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp ACAATGAAGGAACTGATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCTCTTCGAAATCAGGATaGTATCAGAGCCAGGCAGAC +
Preference number: 4 (lower is better)
Translates to: TMKELIMSSVSHQPQLYLSSKSG*YQSQAD
Trigger: GTCTGCCTGGCTCTGATATCATCCTGATTTCGAAGA...GAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTATCAGTTCCTTCATTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp AATATATGGAATGTAGCTCAAATACTCAACACGCAGACTTTACTGGATGCACACAGGCCCCTGACAGTCTaGTTCAGAGTTCCTGTTCTA +
Preference number: 4 (lower is better)
Translates to: NIWNVAQILNTQTLLDAHRPLTV*FRVPVL
Trigger: TAGAACAGGAACTCTGAATCAGACTGTCAGGGGCCT...GTGTGCATCCAGTAAAGTCTGCGTGTTGAGTATTTGAGCTACATTCCATATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTATCTTTGGTAGAGGACTaGAGGAGGATTTTACTTTTC +
Preference number: 4 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVSLVED*RRILLF
Trigger: GAAAAGTAAAATCCTCCTTCAGTCCTCTACCAAAGA...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACAAACTGCTCCCCCTTCTaGGGATTTTACACACCTTTT +
Preference number: 4 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTNCSPF*GFYTPF
Trigger: AAAAGGTGTGTAAAATCCTCAGAAGGGGGAGCAGTT...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp CTGATGACTTGGAAGTATGTGAGGTTTCTAACCGACTCTGTGTACTCCCTTGCTATGACTTCCAATATCTaGTTTGCTGTCATTGGTGAG +
Preference number: 4 (lower is better)
Translates to: LMTWKYVRFLTDSVYSLAMTSNI*FAVIGE
Trigger: CTCACCAATGACAGCAAAGCAGATATTGGAAGTCAT...AGCAAGGGAGTACACAGAGTCGGTTAGAAACCTCACATACTTCCAAGTCATCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp ATTGACAATAATGACACCAGTCGAACCTTCCATTTTTGTTTCAGGGGTAGAAGAAGACTAAATCCAACGTaGCATCTGCTGGGCATGACG +
Preference number: 4 (lower is better)
Translates to: IDNNDTSRTFHFCFRGRRRLNPT*HLLGMT
Trigger: CGTCATGCCCAGCAGATGGCACGTTGGATTTAGTCT...TCTTCTACCCCTGAAACAAAAATGGAAGGTTCGACTGGTGTCATTATTGTCAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp ACAGATACTAGTCTCTACCTCTTCTGCAATTTCCTCCTGAATTACAGATTCTTCAGACTAAATCCAACGTaGCATCTGCTGGGCATGACG +
Preference number: 4 (lower is better)
Translates to: TDTSLYLFCNFLLNYRFFRLNPT*HLLGMT
Trigger: CGTCATGCCCAGCAGATGGCACGTTGGATTTAGTCT...GAAGAATCTGTAATTCAGGAGGAAATTGCAGAAGAGGTAGAGACTAGTATCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp AATATATGGAATGTAGCTCAAATACTCAACACGCAGACTTTACTGGATGCACACAGACTAAATCCAACGTaGCATCTGCTGGGCATGACG +
Preference number: 4 (lower is better)
Translates to: NIWNVAQILNTQTLLDAHRLNPT*HLLGMT
Trigger: CGTCATGCCCAGCAGATGGCACGTTGGATTTAGTCT...GTGTGCATCCAGTAAAGTCTGCGTGTTGAGTATTTGAGCTACATTCCATATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp GAATATCCAAGGTCCAGCAGTCAACTAAACTTTCTATATAGCTCATCCCAGAAATTCTCCATGGGCATTTaGCTCGGCCATATCTGTACC +
Preference number: 4 (lower is better)
Translates to: EYPRSSSQLNFLYSSSQKFSMGI*LGHICT
Trigger: GGTACAGATATGGCCGAGGCAAATGCCCATGGAGAA...TTTCTGGGATGAGCTATATAGAAAGTTTAGTTGACTGCTGGACCTTGGATATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp AATATATGGAATGTAGCTCAAATACTCAACACGCAGACTTTACTGGATGCACACTTCTCCATGGGCATTTaGCTCGGCCATATCTGTACC +
Preference number: 4 (lower is better)
Translates to: NIWNVAQILNTQTLLDAHFSMGI*LGHICT
Trigger: GGTACAGATATGGCCGAGGCAAATGCCCATGGAGAA...GTGTGCATCCAGTAAAGTCTGCGTGTTGAGTATTTGAGCTACATTCCATATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp CGGAGGTGGGCAGACTTGTTGCTAGGAGATCTACAGTTTGGATTGACAATAATGGCTTCATCAGTTACCTaGTTCGAACAAACTCCATTT +
Preference number: 4 (lower is better)
Translates to: RRWADLLLGDLQFGLTIMASSVT*FEQTPF
Trigger: AAATGGAGTTTGTTCGAAGCAGGTAACTGATGAAGC...CATTATTGTCAATCCAAACTGTAGATCTCCTAGCAACAAGTCTGCCCACCTCCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp ACGTTTCAGAGATGCAGGCATTTTCTGAAAGCTGTTCTTCAGGGTCACTCTGTACTTCTTTTCTGCTGCTaGCTCAAAGCCTGTTTAAGA +
Preference number: 4 (lower is better)
Translates to: TFQRCRHFLKAVLQGHSVLLFCC*LKACLR
Trigger: TCTTAAACAGGCTTTGAGGCAGCAGCAGAAAAGAAG...TACAGAGTGACCCTGAAGAACAGCTTTCAGAAAATGCCTGCATCTCTGAAACGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACATGCCTTATCCGCAACTaGATTTCTGGGGTAAACTCT +
Preference number: 4 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTCLIRN*ISGVNS
Trigger: AGAGTTTACCCCAGAAATGCAGTTGCGGATAAGGCA...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp CAGGTATGTTTTCATCAGAACTATGCACAGATAAGTCAGTGGCAGTTTCTGGAATTTTGGCTGTTGTTCTaGCAAGGCTGTCTGTGCAGA +
Preference number: 4 (lower is better)
Translates to: QVCFHQNYAQISQWQFLEFWLLF*QGCLCR
Trigger: TCTGCACAGACAGCCTTGGCAGAACAACAGCCAAAA...TTCCAGAAACTGCCACTGACTTATCTGTGCATAGTTCTGATGAAAACATACCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp TCTCTGAATCTCTACTTTCATTTCTTATCCCATCAGGTGACTTGGAGGGCTCTGGTTATCTTCAGGAGGTaGTATTTGGGGTTCTTCATG +
Preference number: 4 (lower is better)
Translates to: SLNLYFHFLSHQVTWRALVIFRR*YLGFFM
Trigger: CATGAAGAACCCCAAATAGCACCTCCTGAAGATAAC...CAGAGCCCTCCAAGTCACCTGATGGGATAAGAAATGAAAGTAGAGATTCAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp GATGACTTGGAAGTATGTGAGGTTTCTAACCGACTCTGTGTACTCCCTTGCTTAGTTATCTTCAGGAGGTaGTATTTGGGGTTCTTCATG +
Preference number: 4 (lower is better)
Translates to: DDLEVCEVSNRLCVLPCLVIFRR*YLGFFM
Trigger: CATGAAGAACCCCAAATAGCACCTCCTGAAGATAAC...TAAGCAAGGGAGTACACAGAGTCGGTTAGAAACCTCACATACTTCCAAGTCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp AAGAGTAGCACAGAAACCAGGCTCTGGAGAAGCTGGGCTTTTCATGCTTTTTGGATTCCAAAGCTGTGTTaGTCTGCAGTTTTTCTCTTT +
Preference number: 4 (lower is better)
Translates to: KSSTETRLWRSWAFHAFWIPKLC*SAVFLF
Trigger: AAAGAGAAAAACTGCAGAGCAACACAGCTTTGGAAT...CCAAAAAGCATGAAAAGCCCAGCTTCTCCAGAGCCTGGTTTCTGTGCTACTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp ACAATGAAGGAACTGATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCAGATGTGCTAGTGGATaGTCGAGACTCAGGTTTGGA +
Preference number: 4 (lower is better)
Translates to: TMKELIMSSVSHQPQLYLRCASG*SRLRFG
Trigger: TCCAAACCTGAGTCTCGAGCATCCACTAGCACATCT...GAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTATCAGTTCCTTCATTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp TGCATAACCACTTTAACTCATTCCTCTCATTCTCCTTACACATCTGCATTTCCGAGATGTGCTAGTGGATaGTCGAGACTCAGGTTTGGA +
Preference number: 4 (lower is better)
Translates to: CITTLTHSSHSPYTSAFPRCASG*SRLRFG
Trigger: TCCAAACCTGAGTCTCGAGCATCCACTAGCACATCT...CGGAAATGCAGATGTGTAAGGAGAATGAGAGGAATGAGTTAAAGTGGTTATGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp TATCTTCAGGAGGTGCTATTTGGGGTTCTTCATGAGAATTGGTTAGACTTTCAGCTGCTCTTTGATGTGTaGCAGAGTTCTCGTCTTTCC +
Preference number: 4 (lower is better)
Translates to: YLQEVLFGVLHENWLDFQLLFDV*QSSRLS
Trigger: GGAAAGACGAGAACTCTGGCACACATCAAAGAGCAG...CTGAAAGTCTAACCAATTCTCATGAAGAACCCCAAATAGCACCTCCTGAAGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp CAGGTATGTTTTCATCAGAACTATGCACAGATAAGTCAGTGGCAGTTTCTGGAACTTGGGTTAAGAGACTaGTGTAGTACAGTGGTGGTC +
Preference number: 4 (lower is better)
Translates to: QVCFHQNYAQISQWQFLELGLRD*CSTVVV
Trigger: GACCACCACTGTACTACAGCAGTCTCTTAACCCAAG...TTCCAGAAACTGCCACTGACTTATCTGTGCATAGTTCTGATGAAAACATACCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp TGCATAACCACTTTAACTCATTCCTCTCATTCTCCTTACACATCTGCATTTCCGCTTGGGTTAAGAGACTaGTGTAGTACAGTGGTGGTC +
Preference number: 4 (lower is better)
Translates to: CITTLTHSSHSPYTSAFPLGLRD*CSTVVV
Trigger: GACCACCACTGTACTACAGCAGTCTCTTAACCCAAG...CGGAAATGCAGATGTGTAAGGAGAATGAGAGGAATGAGTTAAAGTGGTTATGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp AATATATGGAATGTAGCTCAAATACTCAACACGCAGACTTTACTGGATGCACACGTTTCCAGTAAACATTaGGACGGTCGGGTGTGCAAC +
Preference number: 4 (lower is better)
Translates to: NIWNVAQILNTQTLLDAHVSSKH*DGRVCN
Trigger: GTTGCACACCCGACCGTCGCAATGTTTACTGGAAAC...GTGTGCATCCAGTAAAGTCTGCGTGTTGAGTATTTGAGCTACATTCCATATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTCCAGTTCACAGCTGCTaGTTAAACCTTCCTCAAAAG +
Preference number: 4 (lower is better)
Translates to: FKKIWPTSARSEARMNGCPVHSC*LNLPQK
Trigger: CTTTTGAGGAAGGTTTAAGCAGCAGCTGTGAACTGG...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp ACAATGAAGGAACTGATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCTGCCCAGTTCACAGCTaGTGCTTAAACCTTCCTCAA +
Preference number: 4 (lower is better)
Translates to: TMKELIMSSVSHQPQLYLCPVHS*CLNLPQ
Trigger: TTGAGGAAGGTTTAAGCAGCAGCTGTGAACTGGGCA...GAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTATCAGTTCCTTCATTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp TGCATAACCACTTTAACTCATTCCTCTCATTCTCCTTACACATCTGCATTTCCGAGGAAACTTGTTTCATaGCCAGTTCACAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: CITTLTHSSHSPYTSAFPRKLVS*PVHSCC
Trigger: GCAGCAGCTGTGAACTGGGCATGAAACAAGTTTCCT...CGGAAATGCAGATGTGTAAGGAGAATGAGAGGAATGAGTTAAAGTGGTTATGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp TGCATAACCACTTTAACTCATTCCTCTCATTCTCCTTACACATCTGCATTTCCGATCCACTGGAACTTATaGTGCTTTCCTCGGGTAAGG +
Preference number: 4 (lower is better)
Translates to: CITTLTHSSHSPYTSAFPIHWNL*CFPRVR
Trigger: CCTTACCCGAGGAAAGCAGCATAAGTTCCAGTGGAT...CGGAAATGCAGATGTGTAAGGAGAATGAGAGGAATGAGTTAAAGTGGTTATGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTACCTCACATACTGAGTaGAAAGGTTCTGTAGACTGG +
Preference number: 4 (lower is better)
Translates to: FKKIWPTSARSEARMNGCTSHTE*KGSVDW
Trigger: CCAGTCTACAGAACCTTTGCACTCAGTATGTGAGGT...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp ACAATGAAGGAACTGATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCCCATTTTCTTCTCCATaGGCATTTGCCTCGGCCATA +
Preference number: 4 (lower is better)
Translates to: TMKELIMSSVSHQPQLYLPFSSP*AFASAI
Trigger: TATGGCCGAGGCAAATGCCCATGGAGAAGAAAATGG...GAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTATCAGTTCCTTCATTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTCAATGTCCTCAGCTTTaGTCCATTTCAAGTGCCCTA +
Preference number: 4 (lower is better)
Translates to: FKKIWPTSARSEARMNGCQCPQL*SISSAL
Trigger: TAGGGCACTTGAAATGGACCAAAGCTGAGGACATTG...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000269197.12
CDS-3UTR CCA 90 bp TGTCTTTATACACCTCAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATCTGCCTATCCACTTCTaGGAGCAAAAGCAGGAGGTA +
Preference number: 4 (lower is better)
Translates to: CLYTPQAYAYLIGGGLGNLPIHF*EQKQEV
Trigger: TACCTCCTGCTTTTGCTCCCAGAAGTGGATAGGCAG...ATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTGAGGTGTATAAAGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp TGTCTTTATACACCTCAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATCCGCAACTGCATTTCTaGGGTAAACTCTCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: CLYTPQAYAYLIGGGLGNPQLHF*GKLSFC
Trigger: GCAGAAGGAGAGTTTACCCCAGAAATGCAGTTGCGG...ATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTGAGGTGTATAAAGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp ACAGATACTAGTCTCTACCTCTTCTGCAATTTCCTCCTGAATTACAGATTCTTCAGCTCCAGCGTTGTTTaGTCCAGTAGTGAGCTTCAC +
Preference number: 4 (lower is better)
Translates to: TDTSLYLFCNFLLNYRFFSSSVV*SSSELH
Trigger: GTGAAGCTCACTACTGGACCAAACAACGCTGGAGCT...GAAGAATCTGTAATTCAGGAGGAAATTGCAGAAGAGGTAGAGACTAGTATCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp AATATATGGAATGTAGCTCAAATACTCAACACGCAGACTTTACTGGATGCACACTGTCTGTGCAGAAACTaGAAGGCCAGAAGTCCCACA +
Preference number: 4 (lower is better)
Translates to: NIWNVAQILNTQTLLDAHCLCRN*KARSPT
Trigger: TGTGGGACTTCTGGCCTTCCAGTTTCTGCACAGACA...GTGTGCATCCAGTAAAGTCTGCGTGTTGAGTATTTGAGCTACATTCCATATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp TGCATAACCACTTTAACTCATTCCTCTCATTCTCCTTACACATCTGCATTTCCGAGGCTCTGGAGAAGCTaGGCTTTTCATGCTTTTTGG +
Preference number: 4 (lower is better)
Translates to: CITTLTHSSHSPYTSAFPRLWRS*AFHAFW
Trigger: CCAAAAAGCATGAAAAGCCCAGCTTCTCCAGAGCCT...CGGAAATGCAGATGTGTAAGGAGAATGAGAGGAATGAGTTAAAGTGGTTATGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp TCTCTGAATCTCTACTTTCATTTCTTATCCCATCAGGTGACTTGGAGGGCTCTGTTATTTTGGGGGTACTaGTCTCTACTGCAGTTTCTG +
Preference number: 4 (lower is better)
Translates to: SLNLYFHFLSHQVTWRALLFWGY*SLLQFL
Trigger: CAGAAACTGCAGTAGAGACCAGTACCCCCAAAATAA...CAGAGCCCTCCAAGTCACCTGATGGGATAAGAAATGAAAGTAGAGATTCAGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp CTATTTGGGGTTCTTCATGAGAATTGGTTAGACTTTCAGCCTCCTCAGAAAATTTTTCTGCGGGGAGAGTaGCTCTTCAGATACAGAAGG +
Preference number: 4 (lower is better)
Translates to: LFGVLHENWLDFQPPQKIFLRGE*LFRYRR
Trigger: CCTTCTGTATCTGAAGAGCCACTCTCCCCGCAGAAA...AATTTTCTGAGGAGGCTGAAAGTCTAACCAATTCTCATGAAGAACCCCAAATAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp AATATATGGAATGTAGCTCAAATACTCAACACGCAGACTTTACTGGATGCACACTTTCTGCGGGGAGAGTaGCTCTTCAGATACAGAAGG +
Preference number: 4 (lower is better)
Translates to: NIWNVAQILNTQTLLDAHFLRGE*LFRYRR
Trigger: CCTTCTGTATCTGAAGAGCCACTCTCCCCGCAGAAA...GTGTGCATCCAGTAAAGTCTGCGTGTTGAGTATTTGAGCTACATTCCATATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp AATATATGGAATGTAGCTCAAATACTCAACACGCAGACTTTACTGGATGCACACCCAGAGGTTTGGCAGTaGCGGAAGACTCATCTTTCT +
Preference number: 4 (lower is better)
Translates to: NIWNVAQILNTQTLLDAHPEVWQ*RKTHLS
Trigger: AGAAAGATGAGTCTTCCGCCACTGCCAAACCTCTGG...GTGTGCATCCAGTAAAGTCTGCGTGTTGAGTATTTGAGCTACATTCCATATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp TCTTTAGGTGGAATTTCTACCATAGGGCAAAGAGTAGCACAGAAACCAGGCTCTAGGGCTCTGATGACTTaGAAGTATGTGAGGTTTCTA +
Preference number: 4 (lower is better)
Translates to: SLGGISTIGQRVAQKPGSRALMT*KYVRFL
Trigger: TAGAAACCTCACATACTTCCAAGTCATCAGAGCCCT...AGAGCCTGGTTTCTGTGCTACTCTTTGCCCTATGGTAGAAATTCCACCTAAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp CGGAGGTGGGCAGACTTGTTGCTAGGAGATCTACAGTTTGGATTGACAATAATGCTCAGGTTTGGAGACTaGTTGGCTCTTGATTATAAA +
Preference number: 4 (lower is better)
Translates to: RRWADLLLGDLQFGLTIMLRFGD*LALDYK
Trigger: TTTATAATCAAGAGCCAACCAGTCTCCAAACCTGAG...CATTATTGTCAATCCAAACTGTAGATCTCCTAGCAACAAGTCTGCCCACCTCCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp TGTCTTTATACACCTCAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATGTCTCTTTAGAGGTCTaGAAGAGATGGGCTCGAGCT +
Preference number: 4 (lower is better)
Translates to: CLYTPQAYAYLIGGGLGNVSLEV*KRWARA
Trigger: AGCTCGAGCCCATCTCTTCCAGACCTCTAAAGAGAC...ATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTGAGGTGTATAAAGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACAGCTAGTGGAGAGGTTTaGCAAATTGTTTCCGATGGA +
Preference number: 4 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTASGEV*QIVSDG
Trigger: TCCATCGGAAACAATTTGCCAAACCTCTCCACTAGC...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTCTTCACTCCCAGGTATaGCTATCTTCTCAGAAGGAA +
Preference number: 4 (lower is better)
Translates to: FKKIWPTSARSEARMNGCLHSQV*LSSQKE
Trigger: TTCCTTCTGAGAAGATAGCCATACCTGGGAGTGAAG...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp TGCATAACCACTTTAACTCATTCCTCTCATTCTCCTTACACATCTGCATTTCCGTCACAGTGGTACCCATaGATACAGTGGCCTGTTCTT +
Preference number: 4 (lower is better)
Translates to: CITTLTHSSHSPYTSAFPSQWYP*IQWPVL
Trigger: AAGAACAGGCCACTGTATCCATGGGTACCACTGTGA...CGGAAATGCAGATGTGTAAGGAGAATGAGAGGAATGAGTTAAAGTGGTTATGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp TGTCTTTATACACCTCAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATGGAGACTTGTGCAGGTaGCCGGCAATGTTTTACTGT +
Preference number: 4 (lower is better)
Translates to: CLYTPQAYAYLIGGGLGNGDLCR*PAMFYC
Trigger: ACAGTAAAACATTGCCGGCCACCTGCACAAGTCTCC...ATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTGAGGTGTATAAAGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTCTGGATTTGGAGAGCTaGGCGGAATTTCAACGTTTC +
Preference number: 4 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPLDLES*AEFQRF
Trigger: GAAACGTTGAAATTCCGCCCAGCTCTCCAAATCCAG...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp TGCATAACCACTTTAACTCATTCCTCTCATTCTCCTTACACATCTGCATTTCCGCTTACCATCTGGATTTaGAGAGCTGGGCGGAATTTC +
Preference number: 4 (lower is better)
Translates to: CITTLTHSSHSPYTSAFPLTIWI*RAGRNF
Trigger: GAAATTCCGCCCAGCTCTCCAAATCCAGATGGTAAG...CGGAAATGCAGATGTGTAAGGAGAATGAGAGGAATGAGTTAAAGTGGTTATGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTCACCCCTTTAACATCTaGCTCCACCAACAATTTTCC +
Preference number: 4 (lower is better)
Translates to: FKKIWPTSARSEARMNGCHPFNI*LHQQFS
Trigger: GGAAAATTGTTGGTGGAGCCAGATGTTAAAGGGGTG...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp ACAATGAAGGAACTGATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCTGGGGGATAACATGTTaGCTAACCTTAGCTGGTGAG +
Preference number: 4 (lower is better)
Translates to: TMKELIMSSVSHQPQLYLWGITC*LTLAGE
Trigger: CTCACCAGCTAAGGTTAGCCAACATGTTATCCCCCA...GAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTATCAGTTCCTTCATTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp TGTCTTTATACACCTCAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATCTTTGCACACAATCATaGCTTTCAGCCGGCAAGAGC +
Preference number: 4 (lower is better)
Translates to: CLYTPQAYAYLIGGGLGNLCTQS*LSAGKS
Trigger: GCTCTTGCCGGCTGAAAGCCATGATTGTGTGCAAAG...ATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTGAGGTGTATAAAGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTACTTATGGCTATTGGCTaGCCAATTGCTCTCATATTA +
Preference number: 4 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVLMAIG*PIALIL
Trigger: TAATATGAGAGCAATTGGCCAGCCAATAGCCATAAG...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACATGGTCATTCTTACCCTaGATACAGATGATTCCCCAC +
Preference number: 4 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTWSFLP*IQMIPH
Trigger: GTGGGGAATCATCTGTATCCAGGGTAAGAATGACCA...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTGAAGCACCAAAATCATaGCTACAGCAGCAGGCCTTT +
Preference number: 4 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPEAPKS*LQQQAF
Trigger: AAAGGCCTGCTGCTGTAGCCATGATTTTGGTGCTTC...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp AATATATGGAATGTAGCTCAAATACTCAACACGCAGACTTTACTGGATGCACACCACCCCAACACAACCTaGCAGGCAGTGAAGAGAAAA +
Preference number: 4 (lower is better)
Translates to: NIWNVAQILNTQTLLDAHHPNTT*QAVKRK
Trigger: TTTTCTCTTCACTGCCTGCCAGGTTGTGTTGGGGTG...GTGTGCATCCAGTAAAGTCTGCGTGTTGAGTATTTGAGCTACATTCCATATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR CAA 72 bp GAATCTCTACTTTCATTTCTTATCCCATCAGGTGACTaGGAGGGCTCTGATGACTTGGAAGTATGTGAGGTT +
Preference number: 4 (lower is better)
Translates to: ESLLSFLIPSGD*EGSDDLEVCEV
Trigger: AACCTCACATACTTCCAAGTCATCAGAGCCCTCCAAGTCACCTGATGGGATAAGAAATGAAAGTAGAGATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp CTTGTTGCTAGGAGATCTACAGTTTGGATTGACAATAATGACACCAGTCGAACCACTTTCCAGGGATTTTaGAGAATGTTCCATCCCCTA +
Preference number: 4 (lower is better)
Translates to: LVARRSTVWIDNNDTSRTTFQGF*RMFHPL
Trigger: TAGGGGATGGAACATTCTTCAAAATCCCTGGAAAGT...GGTTCGACTGGTGTCATTATTGTCAATCCAAACTGTAGATCTCCTAGCAACAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTTGTGTTAGTAAGGCTTaGATCTCGAGTGGAAGATGC +
Preference number: 4 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPCVSKA*ISSGRC
Trigger: GCATCTTCCACTCGAGATTCAAGCCTTACTAACACA...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTTTAGAGCTGAAGTACTaGGGCGTAAAATTCCATCAC +
Preference number: 4 (lower is better)
Translates to: FKKIWPTSARSEARMNGCLELKY*GVKFHH
Trigger: GTGATGGAATTTTACGCCTCAGTACTTCAGCTCTAA...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTCATGAAGAACTACTTTaGGCTCCAGCGTTGTTTGGT +
Preference number: 4 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPHEELL*APALFG
Trigger: ACCAAACAACGCTGGAGCTCAAAGTAGTTCTTCATG...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp ACGTTTCAGAGATGCAGGCATTTTCTGAAAGCTGTTCTTCAGGGTCACTCTGTAGATCAAGATATCCTCTaGCTCCAATTCTGCCATTAT +
Preference number: 4 (lower is better)
Translates to: TFQRCRHFLKAVLQGHSVDQDIL*LQFCHY
Trigger: ATAATGGCAGAATTGGAGTCAGAGGATATCTTGATC...TACAGAGTGACCCTGAAGAACAGCTTTCAGAAAATGCCTGCATCTCTGAAACGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp CATTTTCTTCTCCATGGGCATTTGCCTCGGCCATATCTGTACCATCCAATTCAGTCAGGTATTGTCTTATaGTTTTCATCCTGGCATTCA +
Preference number: 4 (lower is better)
Translates to: HFLLHGHLPRPYLYHPIQSGIVL*FSSWHS
Trigger: TGAATGCCAGGATGAAAATCATAAGACAATACCTGA...CTGAATTGGATGGTACAGATATGGCCGAGGCAAATGCCCATGGAGAAGAAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp GATGACTTGGAAGTATGTGAGGTTTCTAACCGACTCTGTGTACTCCCTTGCTTAGACATGAGTCATAGATaGAGTGGAAGGAATAAGAGA +
Preference number: 4 (lower is better)
Translates to: DDLEVCEVSNRLCVLPCLDMSHR*SGRNKR
Trigger: TCTCTTATTCCTTCCACTTCATCTATGACTCATGTC...TAAGCAAGGGAGTACACAGAGTCGGTTAGAAACCTCACATACTTCCAAGTCATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp ACAATGAAGGAACTGATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCCTCTACTGCAGTTTCTaGCTCCTTATGTTCTGTGTC +
Preference number: 4 (lower is better)
Translates to: TMKELIMSSVSHQPQLYLLYCSF*LLMFCV
Trigger: GACACAGAACATAAGGAGTCAGAAACTGCAGTAGAG...GAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTATCAGTTCCTTCATTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp TATCTTCAGGAGGTGCTATTTGGGGTTCTTCATGAGAATTGGTTAGACTTTCAGCTCTACTGCAGTTTCTaGCTCCTTATGTTCTGTGTC +
Preference number: 4 (lower is better)
Translates to: YLQEVLFGVLHENWLDFQLYCSF*LLMFCV
Trigger: GACACAGAACATAAGGAGTCAGAAACTGCAGTAGAG...CTGAAAGTCTAACCAATTCTCATGAAGAACCCCAAATAGCACCTCCTGAAGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp GCTAGTGGATGCTCGAGACTCAGGTTTGGAGACTGGTTGGCTCTTGATTATAAAGACATCAAAGATGCATaGAAGTTTTCATCAGTGGAA +
Preference number: 4 (lower is better)
Translates to: ASGCSRLRFGDWLALDYKDIKDA*KFSSVE
Trigger: TTCCACTGATGAAAACTTTCATGCATCTTTGATGTC...TTTATAATCAAGAGCCAACCAGTCTCCAAACCTGAGTCTCGAGCATCCACTAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACACTCAGTGTCAACATGTaGTTTACAGGTTTGCTGACT +
Preference number: 4 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTLSVNM*FTGLLT
Trigger: AGTCAGCAAACCTGTAAATCACATGTTGACACTGAG...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp AACAAAATGTTGTCTCAAGGGAGGCTGGAGTACATGATTCTTCTGATGTGGACTCTCAGTGTCAACATGTaGTTTACAGGTTTGCTGACT +
Preference number: 4 (lower is better)
Translates to: NKMLSQGRLEYMILLMWTLSVNM*FTGLLT
Trigger: AGTCAGCAAACCTGTAAATCACATGTTGACACTGAG...AGTCCACATCAGAAGAATCATGTACTCCAGCCTCCCTTGAGACAACATTTTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp TGTCTTTATACACCTCAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATCCAATTTTGGAAAGCTaGATCTTGAGAGGGGGAACC +
Preference number: 4 (lower is better)
Translates to: CLYTPQAYAYLIGGGLGNPILES*ILRGGT
Trigger: GGTTCCCCCTCTCAAGATTCAGCTTTCCAAAATTGG...ATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTGAGGTGTATAAAGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp GAATATCCAAGGTCCAGCAGTCAACTAAACTTTCTATATAGCTCATCCCAGAAAAGATGGGCTCGAGCTTaGTGCTTTGCAAAGAGCTTA +
Preference number: 4 (lower is better)
Translates to: EYPRSSSQLNFLYSSSQKRWARA*CFAKSL
Trigger: TAAGCTCTTTGCAAAGCATCAAGCTCGAGCCCATCT...TTTCTGGGATGAGCTATATAGAAAGTTTAGTTGACTGCTGGACCTTGGATATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp ACCTTTAATGGTGTCAAAACAACACGAGGAACAGTCTTGTTTACCATCATTGAGAGATGGGCTCGAGCTTaGTGCTTTGCAAAGAGCTTA +
Preference number: 4 (lower is better)
Translates to: TFNGVKTTRGTVLFTIIERWARA*CFAKSL
Trigger: TAAGCTCTTTGCAAAGCATCAAGCTCGAGCCCATCT...CTCAATGATGGTAAACAAGACTGTTCCTCGTGTTGTTTTGACACCATTAAAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp TGTCTTTATACACCTCAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATGGCACAGAGGTGTACTaGGTGGAGACTAAGTTACTA +
Preference number: 4 (lower is better)
Translates to: CLYTPQAYAYLIGGGLGNGTEVY*VETKLL
Trigger: TAGTAACTTAGTCTCCACTCAGTACACCTCTGTGCC...ATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTGAGGTGTATAAAGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp TGTCTTTATACACCTCAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATGACTTTACACGGAATTaGTCGGTTTATGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: CLYTPQAYAYLIGGGLGNDFTRN*SVYGCW
Trigger: CCAGCAGCCATAAACCGATCAATTCCGTGTAAAGTC...ATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTGAGGTGTATAAAGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTACAAGATTCCTGGGATaGAGTTCTGACACGTTCAAG +
Preference number: 4 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPTRFLG*SSDTFK
Trigger: CTTGAACGTGTCAGAACTTCATCCCAGGAATCTTGT...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTGGTTCACATTTAACTTaGGTGTGTTCTCCTACAGTC +
Preference number: 4 (lower is better)
Translates to: FKKIWPTSARSEARMNGCGSHLT*VCSPTV
Trigger: GACTGTAGGAGAACACACTCAAGTTAAATGTGAACC...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACATGCACCTGCATTTTCTaGGCAGCTAATTGGGTAAAA +
Preference number: 4 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTCTCIF*AANWVK
Trigger: TTTTACCCAATTAGCTGCTCAGAAAATGCAGGTGCA...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACATGGTATAGCAGTGAATaGATTTGGAAGGAGTTGGCA +
Preference number: 4 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTWYSSE*IWKELA
Trigger: TGCCAACTCCTTCCAAATTCATTCACTGCTATACCA...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTGGTAACTTCCACTTTTaGAATTGTGCGGGGGTTTGT +
Preference number: 4 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPGNFHF*NCAGVC
Trigger: ACAAACCCCCGCACAATTTCAAAAGTGGAAGTTACC...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTAACTGCTCCCCCTTCTaGGGATTTTACACACCTTTT +
Preference number: 4 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPNCSPF*GFYTPF
Trigger: AAAAGGTGTGTAAAATCCTCAGAAGGGGGAGCAGTT...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp TTTGCTGACTCAGGGTCTTATTGTGCAAATCTTCAGACGGAAATGCTTCAGGAGATGACTTCCAATATCTaGTTTGCTGTCATTGGTGAG +
Preference number: 4 (lower is better)
Translates to: FADSGSYCANLQTEMLQEMTSNI*FAVIGE
Trigger: CTCACCAATGACAGCAAAGCAGATATTGGAAGTCAT...CTCCTGAAGCATTTCCGTCTGAAGATTTGCACAATAAGACCCTGAGTCAGCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp AACATCATTCATCATAACACAGGATTCCAAGTTATCTTCAGGAGGTGCTATTTGTTCTCCATGGGCATTTaGCTCGGCCATATCTGTACC +
Preference number: 4 (lower is better)
Translates to: NIIHHNTGFQVIFRRCYLFSMGI*LGHICT
Trigger: GGTACAGATATGGCCGAGGCAAATGCCCATGGAGAA...CAAATAGCACCTCCTGAAGATAACTTGGAATCCTGTGTTATGATGAATGATGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp GATGACTTGGAAGTATGTGAGGTTTCTAACCGACTCTGTGTACTCCCTTGCTTAGCTTCATCAGTTACCTaGTTCGAACAAACTCCATTT +
Preference number: 4 (lower is better)
Translates to: DDLEVCEVSNRLCVLPCLASSVT*FEQTPF
Trigger: AAATGGAGTTTGTTCGAAGCAGGTAACTGATGAAGC...TAAGCAAGGGAGTACACAGAGTCGGTTAGAAACCTCACATACTTCCAAGTCATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTATCTCGAGTGGAAGATaGTTCATCAGTTACCTGCTT +
Preference number: 4 (lower is better)
Translates to: FKKIWPTSARSEARMNGCISSGR*FISYLL
Trigger: AAGCAGGTAACTGATGAAGCATCTTCCACTCGAGAT...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTGACACTAACTTGCTTTaGACTGCTGTGTTAGTAAGG +
Preference number: 4 (lower is better)
Translates to: FKKIWPTSARSEARMNGCDTNLL*TAVLVR
Trigger: CCTTACTAACACAGCAGTGCAAAGCAAGTTAGTGTC...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp ATTGACAATAATGACACCAGTCGAACCTTCCATTTTTGTTTCAGGGGTAGAAGAGCCTTTTTGGTGTGCTaGTGGAAGGAAGACACTAAC +
Preference number: 4 (lower is better)
Translates to: IDNNDTSRTFHFCFRGRRAFLVC*WKEDTN
Trigger: GTTAGTGTCTTCCTTCCAGCAGCACACCAAAAAGGC...TCTTCTACCCCTGAAACAAAAATGGAAGGTTCGACTGGTGTCATTATTGTCAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp GAATATCCAAGGTCCAGCAGTCAACTAAACTTTCTATATAGCTCATCCCAGAAAGCCTTTTTGGTGTGCTaGTGGAAGGAAGACACTAAC +
Preference number: 4 (lower is better)
Translates to: EYPRSSSQLNFLYSSSQKAFLVC*WKEDTN
Trigger: GTTAGTGTCTTCCTTCCAGCAGCACACCAAAAAGGC...TTTCTGGGATGAGCTATATAGAAAGTTTAGTTGACTGCTGGACCTTGGATATTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTCTTCTTTTCTGCTGCTaGCTCAAAGCCTGTTTAAGA +
Preference number: 4 (lower is better)
Translates to: FKKIWPTSARSEARMNGCLLFCC*LKACLR
Trigger: TCTTAAACAGGCTTTGAGGCAGCAGCAGAAAAGAAG...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp AACAAAATGTTGTCTCAAGGGAGGCTGGAGTACATGATTCTTCTGATGTGGACTCTTCTTTTCTGCTGCTaGCTCAAAGCCTGTTTAAGA +
Preference number: 4 (lower is better)
Translates to: NKMLSQGRLEYMILLMWTLLFCC*LKACLR
Trigger: TCTTAAACAGGCTTTGAGGCAGCAGCAGAAAAGAAG...AGTCCACATCAGAAGAATCATGTACTCCAGCCTCCCTTGAGACAACATTTTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp ACAATGAAGGAACTGATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCGAAGGCGAATCCGACTaGTCATCAGACACCTTTAAT +
Preference number: 4 (lower is better)
Translates to: TMKELIMSSVSHQPQLYLEGESD*SSDTFN
Trigger: ATTAAAGGTGTCTGATGAGCAGTCGGATTCGCCTTC...GAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTATCAGTTCCTTCATTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACACTGTTTCCACCCTTGTaGTGCATATGCAAAGAATTC +
Preference number: 4 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTLFPPL*CICKEF
Trigger: GAATTCTTTGCATATGCAGCACAAGGGTGGAAACAG...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp TGCATAACCACTTTAACTCATTCCTCTCATTCTCCTTACACATCTGCATTTCCGTGCCTTATCCGCAACTaGATTTCTGGGGTAAACTCT +
Preference number: 4 (lower is better)
Translates to: CITTLTHSSHSPYTSAFPCLIRN*ISGVNS
Trigger: AGAGTTTACCCCAGAAATGCAGTTGCGGATAAGGCA...CGGAAATGCAGATGTGTAAGGAGAATGAGAGGAATGAGTTAAAGTGGTTATGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp TCTTTAGGTGGAATTTCTACCATAGGGCAAAGAGTAGCACAGAAACCAGGCTCTTCCTTCTCAATTTCTTaGCTTATCCGCAACTGCATT +
Preference number: 4 (lower is better)
Translates to: SLGGISTIGQRVAQKPGSSFSIS*LIRNCI
Trigger: AATGCAGTTGCGGATAAGGCAAGAAATTGAGAAGGA...AGAGCCTGGTTTCTGTGCTACTCTTTGCCCTATGGTAGAAATTCCACCTAAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp GATGACTTGGAAGTATGTGAGGTTTCTAACCGACTCTGTGTACTCCCTTGCTTAATTCCTCTCTTGACATaGCCAGCTTTTCTCCATAAA +
Preference number: 4 (lower is better)
Translates to: DDLEVCEVSNRLCVLPCLIPLLT*PAFLHK
Trigger: TTTATGGAGAAAAGCTGGGCATGTCAAGAGAGGAAT...TAAGCAAGGGAGTACACAGAGTCGGTTAGAAACCTCACATACTTCCAAGTCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp TCTTTAGGTGGAATTTCTACCATAGGGCAAAGAGTAGCACAGAAACCAGGCTCTATTCCTCTCTTGACATaGCCAGCTTTTCTCCATAAA +
Preference number: 4 (lower is better)
Translates to: SLGGISTIGQRVAQKPGSIPLLT*PAFLHK
Trigger: TTTATGGAGAAAAGCTGGGCATGTCAAGAGAGGAAT...AGAGCCTGGTTTCTGTGCTACTCTTTGCCCTATGGTAGAAATTCCACCTAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp AATATATGGAATGTAGCTCAAATACTCAACACGCAGACTTTACTGGATGCACACTTTTGGCTGTTGTTCTaGCAAGGCTGTCTGTGCAGA +
Preference number: 4 (lower is better)
Translates to: NIWNVAQILNTQTLLDAHFWLLF*QGCLCR
Trigger: TCTGCACAGACAGCCTTGGCAGAACAACAGCCAAAA...GTGTGCATCCAGTAAAGTCTGCGTGTTGAGTATTTGAGCTACATTCCATATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTTTAGACAGATTCTTCTaGTGGGAGGTAAGGTTCTCT +
Preference number: 4 (lower is better)
Translates to: FKKIWPTSARSEARMNGCLDRFF*WEVRFS
Trigger: AGAGAACCTTACCTCCCAGCAGAAGAATCTGTCTAA...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp CCATCAGGTGACTTGGAGGGCTCTGATGACTTGGAAGTATGTGAGGTTTCTAACCTCTGTGTACTCCCTTaGTTATGTGTTTTATTTCTA +
Preference number: 4 (lower is better)
Translates to: PSGDLEGSDDLEVCEVSNLCVLP*LCVLFL
Trigger: TAGAAATAAAACACATAAGCAAGGGAGTACACAGAG...GTTAGAAACCTCACATACTTCCAAGTCATCAGAGCCCTCCAAGTCACCTGATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp TGTCTTTATACACCTCAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATCTGCTCTTTGATGTGTaGCAGAGTTCTCGTCTTTCC +
Preference number: 4 (lower is better)
Translates to: CLYTPQAYAYLIGGGLGNLLFDV*QSSRLS
Trigger: GGAAAGACGAGAACTCTGGCACACATCAAAGAGCAG...ATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTGAGGTGTATAAAGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp ACAATGAAGGAACTGATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCAGCTTAGCCTTTGTCTaGTCTTTGATGTGTGCCAGA +
Preference number: 4 (lower is better)
Translates to: TMKELIMSSVSHQPQLYLSLAFV*SLMCAR
Trigger: TCTGGCACACATCAAAGAGCAGACAAAGGCTAAGCT...GAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTATCAGTTCCTTCATTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTATTTTCATCAGAACTATaGACAGATAAGTCAGTGGCA +
Preference number: 4 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVFSSEL*TDKSVA
Trigger: TGCCACTGACTTATCTGTGCATAGTTCTGATGAAAA...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp TGTCTTTATACACCTCAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATTTGCCCTGTAGTAACTaGGTCACCAGCGGATTGTTA +
Preference number: 4 (lower is better)
Translates to: CLYTPQAYAYLIGGGLGNLPCSN*VTSGLL
Trigger: TAACAATCCGCTGGTGACGCAGTTACTACAGGGCAA...ATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTGAGGTGTATAAAGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp TGCATAACCACTTTAACTCATTCCTCTCATTCTCCTTACACATCTGCATTTCCGCCCTTCTGTTCAAGATaGCTGTTGAAGGCAAATGCA