RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ASXL3 (Homo sapiens)

Ensembl gene IDs: ENSG00000141431

Ensembl transcript IDs: ENST00000269197.12, ENST00000585426.5, ENST00000586327.6, ENST00000586948.1, ENST00000588038.5, ENST00000590189.6, ENST00000590225.5, ENST00000590973.2, ENST00000592288.6, ENST00000592349.5, ENST00000592541.6, ENST00000593195.6, ENST00000593235.1, ENST00000642541.1, ENST00000647014.1, ENST00000681521.1

Found 1580 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ATGCTCGCTGCAGCAGCCACAGCAGCAGCTGCAGCAGCCTCTCGCTaGGCCCGAGCTTGTTGGGCCCGGGCCTTGATATCTGCGAGGGTC +
Preference number: 1 (lower is better)
Translates to: MLAAAATAAAAAASR*ARACWARALISARV
Trigger: GACCCTCGCAGATATCAAGGCCCGGGCCCAACAAGCTCGGGCCCAGCGAGAGGCTGCTGCAGCTGCTGCTGTGGCTGCTGCAGCGAGCAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR GCA 90 bp TCGTCTTTCCACCCTCTCCTGGACTTCCCATGGCTCCAGAGACAATaGTCGCTGCAGCAGCCACAGCAGCAGCTGCAGCAGCCTCTCGCT +
Preference number: 1 (lower is better)
Translates to: SSFHPLLDFPWLQRQ*SLQQPQQQLQQPLA
Trigger: AGCGAGAGGCTGCTGCAGCTGCTGCTGTGGCTGCTGCAGCGAGCATTGTCTCTGGAGCCATGGGAAGTCCAGGAGAGGGTGGAAAGACGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR CCA 90 bp CTGCATGCTCAGGGGGTCATTCCCACTAGGCAGCTACCGCTGTGCTaGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTC +
Preference number: 1 (lower is better)
Translates to: LHAQGVIPTRQLPLC*ASPPYRRCYPRLGF
Trigger: GAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACAGCGGTAGCTGCCTAGTGGGAATGACCCCCTGAGCATGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR GCA 90 bp CACAATTGTTCTCTGGGAACGCAGATGGACAGTGACTCTGGGCTCTaGATGCTCAGGGGGTCATTCCCACTAGGCAGCTACCGCTGTGCT +
Preference number: 1 (lower is better)
Translates to: HNCSLGTQMDSDSGL*MLRGSFPLGSYRCA
Trigger: AGCACAGCGGTAGCTGCCTAGTGGGAATGACCCCCTGAGCATGCAGAGCCCAGAGTCACTGTCCATCTGCGTTCCCAGAGAACAATTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR CCA 90 bp CTGCTCTTTGATGTGTGCCAGAGTTCTCGTCTTTCCACCCTCTCCTaGACTTCCCATGGCTCCAGAGACAATGCTCGCTGCAGCAGCCAC +
Preference number: 1 (lower is better)
Translates to: LLFDVCQSSRLSTLS*TSHGSRDNARCSSH
Trigger: GTGGCTGCTGCAGCGAGCATTGTCTCTGGAGCCATGGGAAGTCCAGGAGAGGGTGGAAAGACGAGAACTCTGGCACACATCAAAGAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR CCA 90 bp CGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTTCTAAAACCTaGGACTTCATTACACCACGGAGGAACTGGGAAACCAGAGGCCAC +
Preference number: 1 (lower is better)
Translates to: RTDDATLGLASASKT*DFITPRRNWETRGH
Trigger: GTGGCCTCTGGTTTCCCAGTTCCTCCGTGGTGTAATGAAGTCCCAGGTTTTAGAAGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR CCA 90 bp ATTCTTCTGATGTGGACTGTGTTTCCCCTCCTGGAGAAGGCAGGCTaGTACAGGCTCCCTCTGGGCTCTCAGAAGAAAAGGACGTTTCAG +
Preference number: 1 (lower is better)
Translates to: ILLMWTVFPLLEKAG*YRLPLGSQKKRTFQ
Trigger: CTGAAACGTCCTTTTCTTCTGAGAGCCCAGAGGGAGCCTGTACCAGCCTGCCTTCTCCAGGAGGGGAAACACAGTCCACATCAGAAGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR GCA 90 bp AGGCTCTGGAGAAGCTGGGCTTTTCATGCTTTTTGGCTGTTGTTCTaGCAAGGCTGTCTGTGCAGAAACTGGAAGGCCAGAAGTCCCACA +
Preference number: 1 (lower is better)
Translates to: RLWRSWAFHAFWLLF*QGCLCRNWKARSPT
Trigger: TGTGGGACTTCTGGCCTTCCAGTTTCTGCACAGACAGCCTTGGCAGAACAACAGCCAAAAAGCATGAAAAGCCCAGCTTCTCCAGAGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR GCA 90 bp CCTGGCTCCTGTGTTCCTCCCGCCACTGACAGATGTGCTAGTGGATaGTCGAGACTCAGGTTTGGAGACTGGTTGGCTCTTGATTATAAA +
Preference number: 1 (lower is better)
Translates to: PGSCVPPATDRCASG*SRLRFGDWLALDYK
Trigger: TTTATAATCAAGAGCCAACCAGTCTCCAAACCTGAGTCTCGAGCATCCACTAGCACATCTGTCAGTGGCGGGAGGAACACAGGAGCCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR TCA 90 bp TGCCAAGGCTGTCTGTGCAGAAACTGGAAGGCCAGAAGTCCCACATaGAGAACTACTTTGAGCTCCAGCGTTGTTTGGTCCAGTAGTGAG +
Preference number: 1 (lower is better)
Translates to: CQGCLCRNWKARSPT*RTTLSSSVVWSSSE
Trigger: CTCACTACTGGACCAAACAACGCTGGAGCTCAAAGTAGTTCTTCATGTGGGACTTCTGGCCTTCCAGTTTCTGCACAGACAGCCTTGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR TCA 90 bp GGCAACCGGGTCTCTTTAGAGGTCTGGAAGAGATGGGCTCGAGCTTaGTGCTTTGCAAAGAGCTTAGCCTTTGTCTGCTCTTTGATGTGT +
Preference number: 1 (lower is better)
Translates to: GNRVSLEVWKRWARA*CFAKSLAFVCSLMC
Trigger: ACACATCAAAGAGCAGACAAAGGCTAAGCTCTTTGCAAAGCATCAAGCTCGAGCCCATCTCTTCCAGACCTCTAAAGAGACCCGGTTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR GCA 90 bp GATAAGTCAGTGGCAGTTTCTGGAAGTTTACTTGGGTTAAGAGACTaGTGTAGTACAGTGGTGGTCTCCCGGAGGTGGGCAGACTTGTTG +
Preference number: 1 (lower is better)
Translates to: DKSVAVSGSLLGLRD*CSTVVVSRRWADLL
Trigger: CAACAAGTCTGCCCACCTCCGGGAGACCACCACTGTACTACAGCAGTCTCTTAACCCAAGTAAACTTCCAGAAACTGCCACTGACTTATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR CCA 90 bp TACCATAGGGCAAAGAGTAGCACAGAAACCAGGCTCTGGAGAAGCTaGGCTTTTCATGCTTTTTGGCTGTTGTTCTGCCAAGGCTGTCTG +
Preference number: 1 (lower is better)
Translates to: YHRAKSSTETRLWRS*AFHAFWLLFCQGCL
Trigger: CAGACAGCCTTGGCAGAACAACAGCCAAAAAGCATGAAAAGCCCAGCTTCTCCAGAGCCTGGTTTCTGTGCTACTCTTTGCCCTATGGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR TCA 90 bp TGTGCAGAAACTGGAAGGCCAGAAGTCCCACATGAAGAACTACTTTaGGCTCCAGCGTTGTTTGGTCCAGTAGTGAGCTTCACAGATTCC +
Preference number: 1 (lower is better)
Translates to: CAETGRPEVPHEELL*APALFGPVVSFTDS
Trigger: GGAATCTGTGAAGCTCACTACTGGACCAAACAACGCTGGAGCTCAAAGTAGTTCTTCATGTGGGACTTCTGGCCTTCCAGTTTCTGCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR GCA 90 bp TACAGGCTCCCTCTGGGCTCTCAGAAGAAAAGGACGTTTCAGAGATaGAGGCATTTTCTGAAAGCTGTTCTTCAGGGTCACTCTGTAGCT +
Preference number: 1 (lower is better)
Translates to: YRLPLGSQKKRTFQR*RHFLKAVLQGHSVA
Trigger: AGCTACAGAGTGACCCTGAAGAACAGCTTTCAGAAAATGCCTGCATCTCTGAAACGTCCTTTTCTTCTGAGAGCCCAGAGGGAGCCTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR CCA 90 bp CCCAACACAACCTGGCAGGCAGTGAAGAGAAAACTAAGGATCCACTaGAACTTATGCTGCTTTCCTCGGGTAAGGCTGGTTAAGTGCATT +
Preference number: 1 (lower is better)
Translates to: PNTTWQAVKRKLRIH*NLCCFPRVRLVKCI
Trigger: AATGCACTTAACCAGCCTTACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGCCTGCCAGGTTGTGTTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR CCA 90 bp CTTGGGTTAAGAGACTGCTGTAGTACAGTGGTGGTCTCCCGGAGGTaGGCAGACTTGTTGCTAGGAGATCTACAGTTTGGATTGACAATA +
Preference number: 1 (lower is better)
Translates to: LGLRDCCSTVVVSRR*ADLLLGDLQFGLTI
Trigger: TATTGTCAATCCAAACTGTAGATCTCCTAGCAACAAGTCTGCCCACCTCCGGGAGACCACCACTGTACTACAGCAGTCTCTTAACCCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR CCA 90 bp TGCTGCTGCCTCAAAGCCTGTTTAAGAGCCTTTTTGGTGTGCTGCTaGAAGGAAGACACTAACTTGCTTTGCACTGCTGTGTTAGTAAGG +
Preference number: 1 (lower is better)
Translates to: CCCLKACLRAFLVCC*KEDTNLLCTAVLVR
Trigger: CCTTACTAACACAGCAGTGCAAAGCAAGTTAGTGTCTTCCTTCCAGCAGCACACCAAAAAGGCTCTTAAACAGGCTTTGAGGCAGCAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
3UTR GCA 90 bp AGAGCCTTTTTGGTGTGCTGCTGGAAGGAAGACACTAACTTGCTTTaGACTGCTGTGTTAGTAAGGCTTGAATCTCGAGTGGAAGATGCT +
Preference number: 1 (lower is better)
Translates to: RAFLVCCWKEDTNLL*TAVLVRLESRVEDA
Trigger: AGCATCTTCCACTCGAGATTCAAGCCTTACTAACACAGCAGTGCAAAGCAAGTTAGTGTCTTCCTTCCAGCAGCACACCAAAAAGGCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
3UTR GCA 90 bp TTCTGCTGCTGCCTCAAAGCCTGTTTAAGAGCCTTTTTGGTGTGCTaGTGGAAGGAAGACACTAACTTGCTTTGCACTGCTGTGTTAGTA +
Preference number: 1 (lower is better)
Translates to: FCCCLKACLRAFLVC*WKEDTNLLCTAVLV
Trigger: TACTAACACAGCAGTGCAAAGCAAGTTAGTGTCTTCCTTCCAGCAGCACACCAAAAAGGCTCTTAAACAGGCTTTGAGGCAGCAGCAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
3UTR CCA 90 bp GCCACACATGAAGCTCTAAAATCCTCTGGGCTTATGGCTATTGGCTaGCCAATTGCTCTCATATTATCAGGTGTCAAAGGCCTAGAACCA +
Preference number: 1 (lower is better)
Translates to: ATHEALKSSGLMAIG*PIALILSGVKGLEP
Trigger: TGGTTCTAGGCCTTTGACACCTGATAATATGAGAGCAATTGGCCAGCCAATAGCCATAAGCCCAGAGGATTTTAGAGCTTCATGTGTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR CCA 90 bp TGGAATTTCTACCATAGGGCAAAGAGTAGCACAGAAACCAGGCTCTaGAGAAGCTGGGCTTTTCATGCTTTTTGGCTGTTGTTCTGCCAA +
Preference number: 1 (lower is better)
Translates to: WNFYHRAKSSTETRL*RSWAFHAFWLLFCQ
Trigger: TTGGCAGAACAACAGCCAAAAAGCATGAAAAGCCCAGCTTCTCCAGAGCCTGGTTTCTGTGCTACTCTTTGCCCTATGGTAGAAATTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR CCA 90 bp ACTGACAGATGTGCTAGTGGATGCTCGAGACTCAGGTTTGGAGACTaGTTGGCTCTTGATTATAAAAGGTGGCCCAATTTTGGAAAGCTG +
Preference number: 1 (lower is better)
Translates to: TDRCASGCSRLRFGD*LALDYKRWPNFGKL
Trigger: CAGCTTTCCAAAATTGGGCCACCTTTTATAATCAAGAGCCAACCAGTCTCCAAACCTGAGTCTCGAGCATCCACTAGCACATCTGTCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR CCA 90 bp GGTCTCCCGGAGGTGGGCAGACTTGTTGCTAGGAGATCTACAGTTTaGATTGACAATAATGACACCAGTCGAACCTTCCATTTTTGTTTC +
Preference number: 1 (lower is better)
Translates to: GLPEVGRLVARRSTV*IDNNDTSRTFHFCF
Trigger: GAAACAAAAATGGAAGGTTCGACTGGTGTCATTATTGTCAATCCAAACTGTAGATCTCCTAGCAACAAGTCTGCCCACCTCCGGGAGACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR TCA 90 bp AGACATGCCAGTGAGCCATTCAGTTGGGATGCATCCTCCCCTTTATaGGAAATGCAAGAAAATAATGCCATAGAGGAAAGGTACCTGCTC +
Preference number: 1 (lower is better)
Translates to: RHASEPFSWDASSPL*EMQENNAIEERYLL
Trigger: GAGCAGGTACCTTTCCTCTATGGCATTATTTTCTTGCATTTCTCATAAAGGGGAGGATGCATCCCAACTGAATGGCTCACTGGCATGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR GCA 90 bp GGTTTGCTGACTCAGGGTCTTATTGTGCAAATCTTCAGACGGAAATaGTTCAGGAGCAATGGAAGAAGAACTCATTATGATGGGTTCGGG +
Preference number: 1 (lower is better)
Translates to: GLLTQGLIVQIFRRK*FRSNGRRTHYDGFG
Trigger: CCCGAACCCATCATAATGAGTTCTTCTTCCATTGCTCCTGAAGCATTTCCGTCTGAAGATTTGCACAATAAGACCCTGAGTCAGCAAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR CCA 90 bp ACAGTATCTGACACTGGTATAGCAGTGAATGAATTTGGAAGGAGTTaGCATGCAAGTGTCTATATTATAGGGGTGCCCCGCTGTGAGACT +
Preference number: 1 (lower is better)
Translates to: TVSDTGIAVNEFGRS*HASVYIIGVPRCET
Trigger: AGTCTCACAGCGGGGCACCCCTATAATATAGACACTTGCATGCCAACTCCTTCCAAATTCATTCACTGCTATACCAGTGTCAGATACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR CCA 90 bp TTTCATTTCTTATCCCATCAGGTGACTTGGAGGGCTCTGATGACTTaGAAGTATGTGAGGTTTCTAACCGACTCTGTGTACTCCCTTGCT +
Preference number: 1 (lower is better)
Translates to: FHFLSHQVTWRALMT*KYVRFLTDSVYSLA
Trigger: AGCAAGGGAGTACACAGAGTCGGTTAGAAACCTCACATACTTCCAAGTCATCAGAGCCCTCCAAGTCACCTGATGGGATAAGAAATGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR TCA 90 bp CAAGCATTCGGTTCAGCATCACCTCATGACCAACACGAAAGCAGCTaGGGCTCTAATATAATCATCATGGAAAGTTGTCCCAAATCCTTC +
Preference number: 1 (lower is better)
Translates to: QAFGSASPHDQHESS*GSNIIIMESCPKSF
Trigger: GAAGGATTTGGGACAACTTTCCATGATGATTATATTAGAGCCTCAGCTGCTTTCGTGTTGGTCATGAGGTGATGCTGAACCGAATGCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593195.6
3UTR TCA 90 bp AGACTCATCTTTCTGCGGGGAGAGTGGCTCTTCAGATACAGAAGGTaGCTTTCTTTGCTGATGTGCCATTCTCTCATTTATGGAAGAGTT +
Preference number: 1 (lower is better)
Translates to: RLIFLRGEWLFRYRR*LSLLMCHSLIYGRV
Trigger: AACTCTTCCATAAATGAGAGAATGGCACATCAGCAAAGAAAGTCACCTTCTGTATCTGAAGAGCCACTCTCCCCGCAGAAAGATGAGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR TCA 90 bp ATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCACATACTaGGTGCAAAGGTTCTGTAGACTGGAGTTTCTTCCGACACCATGT +
Preference number: 1 (lower is better)
Translates to: IMSSVSHQPQLYLTY*VQRFCRLEFLPTPC
Trigger: ACATGGTGTCGGAAGAAACTCCAGTCTACAGAACCTTTGCACTCAGTATGTGAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR TCA 90 bp TTCTGTAGACTGGAGTTTCTTCCGACACCATGTCAGTTACTGATGTaGTGGTTTTCAATTTGCTGGTGTAGACAGTATCTGACACTGGTA +
Preference number: 1 (lower is better)
Translates to: FCRLEFLPTPCQLLM*WFSICWCRQYLTLV
Trigger: TACCAGTGTCAGATACTGTCTACACCAGCAAATTGAAAACCATCACATCAGTAACTGACATGGTGTCGGAAGAAACTCCAGTCTACAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR TCA 90 bp CTTGTGCTGCATATGCAAAGAATTCATTATTTAGAGCTGAAGTACTaGGGCGTAAAATTCCATCACTTCCCATCTGAAGGCGAATCCGAC +
Preference number: 1 (lower is better)
Translates to: LVLHMQRIHYLELKY*GVKFHHFPSEGESD
Trigger: GTCGGATTCGCCTTCAGATGGGAAGTGATGGAATTTTACGCCTCAGTACTTCAGCTCTAAATAATGAATTCTTTGCATATGCAGCACAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592541.6
3UTR CCA 90 bp ATATCTCTGAATCTCTACTTTCATTTCTTATCCCATCAGGTGACTTaGAGGGCTCTGATGACTTGGAAGTATGTGAGGTTTCTAACCGAC +
Preference number: 1 (lower is better)
Translates to: ISLNLYFHFLSHQVT*RALMTWKYVRFLTD
Trigger: GTCGGTTAGAAACCTCACATACTTCCAAGTCATCAGAGCCCTCCAAGTCACCTGATGGGATAAGAAATGAAAGTAGAGATTCAGAGATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR TCA 90 bp CTTGTGCTGCATATGCAAAGAATTCATTATTTAGAGCTGAAGTACTaGGGCGTAAAATTCCATCACTTCCCATCTGCCTATCCACTTCTG +
Preference number: 1 (lower is better)
Translates to: LVLHMQRIHYLELKY*GVKFHHFPSAYPLL
Trigger: CAGAAGTGGATAGGCAGATGGGAAGTGATGGAATTTTACGCCTCAGTACTTCAGCTCTAAATAATGAATTCTTTGCATATGCAGCACAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593195.6
3UTR TCA 90 bp CAGGATTCCAAGTTATCTTCAGGAGGTGCTATTTGGGGTTCTTCATaGGAATTGGTTAGACTTTCAGCCTCCTCAGAAAATTCAGGTATT +
Preference number: 1 (lower is better)
Translates to: QDSKLSSGGAIWGSS*ELVRLSASSENSGI
Trigger: AATACCTGAATTTTCTGAGGAGGCTGAAAGTCTAACCAATTCTCATGAAGAACCCCAAATAGCACCTCCTGAAGATAACTTGGAATCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR GCA 90 bp GACTTGGAAGTATGTGAGGTTTCTAACCGACTCTGTGTACTCCCTTaGTTATGTGTTTTATTTCTAGAGCCTTCTGAAAATGGAGCCTTA +
Preference number: 1 (lower is better)
Translates to: DLEVCEVSNRLCVLP*LCVLFLEPSENGAL
Trigger: TAAGGCTCCATTTTCAGAAGGCTCTAGAAATAAAACACATAAGCAAGGGAGTACACAGAGTCGGTTAGAAACCTCACATACTTCCAAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR TCA 90 bp TGTGTACAAAATCCAAGGAAGATCCAGATATTCTGCCATAGTCTCTaGGAAAGTACAACAGGAGGAAAGATAATACTCAGGACAGTGGAT +
Preference number: 1 (lower is better)
Translates to: CVQNPRKIQIFCHSL*ESTTGGKIILRTVD
Trigger: ATCCACTGTCCTGAGTATTATCTTTCCTCCTGTTGTACTTTCTCAGAGACTATGGCAGAATATCTGGATCTTCCTTGGATTTTGTACACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR CCA 90 bp CCAAGTTATCTTCAGGAGGTGCTATTTGGGGTTCTTCATGAGAATTaGTTAGACTTTCAGCCTCCTCAGAAAATTCAGGTATTGTCTTAT +
Preference number: 1 (lower is better)
Translates to: PSYLQEVLFGVLHEN*LDFQPPQKIQVLSY
Trigger: ATAAGACAATACCTGAATTTTCTGAGGAGGCTGAAAGTCTAACCAATTCTCATGAAGAACCCCAAATAGCACCTCCTGAAGATAACTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR TCA 90 bp TTGGTTAGACTTTCAGCCTCCTCAGAAAATTCAGGTATTGTCTTATaGTTTTCATCCTGGCATTCACAGATACTAGTCTCTACCTCTTCT +
Preference number: 1 (lower is better)
Translates to: LVRLSASSENSGIVL*FSSWHSQILVSTSS
Trigger: AGAAGAGGTAGAGACTAGTATCTGTGAATGCCAGGATGAAAATCATAAGACAATACCTGAATTTTCTGAGGAGGCTGAAAGTCTAACCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR TCA 90 bp AATTTCCTCCTGAATTACAGATTCTTCAGGGATCAAGATATCCTCTaGCTCCAATTCTGCCATTATATCTTTAGGTGGAATTTCTACCAT +
Preference number: 1 (lower is better)
Translates to: NFLLNYRFFRDQDIL*LQFCHYIFRWNFYH
Trigger: ATGGTAGAAATTCCACCTAAAGATATAATGGCAGAATTGGAGTCAGAGGATATCTTGATCCCTGAAGAATCTGTAATTCAGGAGGAAATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR GCA 90 bp CACTGTGGTAAAGCTAGGTTCAGAGAAGTCAACTGTAAAATTCCTTaGTGTAATGGCTCATCTATAGAAAAATGCATAACCACTTTAACT +
Preference number: 1 (lower is better)
Translates to: HCGKARFREVNCKIP*CNGSSIEKCITTLT
Trigger: AGTTAAAGTGGTTATGCATTTTTCTATAGATGAGCCATTACAGCAAGGAATTTTACAGTTGACTTCTCTGAACCTAGCTTTACCACAGTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR GCA 90 bp TATATGGAATGTAGCTCAAATACTCAACACGCAGACTTTACTGGATaGACACTGAAGATAACTGTTAAGATGCAGTATCCCTTTTTCAAA +
Preference number: 1 (lower is better)
Translates to: YMECSSNTQHADFTG*TLKITVKMQYPFFK
Trigger: TTTGAAAAAGGGATACTGCATCTTAACAGTTATCTTCAGTGTGCATCCAGTAAAGTCTGCGTGTTGAGTATTTGAGCTACATTCCATATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR GCA 90 bp TGTAAAGGAAATGGGGCTACAGCAACATGTATTCTTACTCTCGACTaGATTATAAAGCACCATATGTACCAGCTTGTTTTTGTGTATTTT +
Preference number: 1 (lower is better)
Translates to: CKGNGATATCILTLD*IIKHHMYQLVFVYF
Trigger: AAAATACACAAAAACAAGCTGGTACATATGGTGCTTTATAATGCAGTCGAGAGTAAGAATACATGTTGCTGTAGCCCCATTTCCTTTACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR CAA 90 bp GCTGCAGCAGCCTCTCGCTGGGCCCGAGCTTGTTGGGCCCGGGCCTaGATATCTGCGAGGGTCCTGGCTCCTGTGTTCCTCCCGCCACTG +
Preference number: 2 (lower is better)
Translates to: AAAASRWARACWARA*ISARVLAPVFLPPL
Trigger: CAGTGGCGGGAGGAACACAGGAGCCAGGACCCTCGCAGATATCAAGGCCCGGGCCCAACAAGCTCGGGCCCAGCGAGAGGCTGCTGCAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CCA 90 bp CTCCTGGACTTCCCATGGCTCCAGAGACAATGCTCGCTGCAGCAGCCACAGCAGCTGGAGAAGGCAGGCTaGTACAGGCTCCCTCTGGGC +
Preference number: 2 (lower is better)
Translates to: LLDFPWLQRQCSLQQPQQLEKAG*YRLPLG
Trigger: GCCCAGAGGGAGCCTGTACCAGCCTGCCTTCTCCAG...CTGCTGTGGCTGCTGCAGCGAGCATTGTCTCTGGAGCCATGGGAAGTCCAGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR TCA 90 bp CAATGCTCGCTGCAGCAGCCACAGCAGCAGCTGCAGCAGCCTCTCGCTGGGCCCTTCAGCATCACCTCATaGCCAACACGAAAGCAGCTG +
Preference number: 2 (lower is better)
Translates to: QCSLQQPQQQLQQPLAGPFSITS*PTRKQL
Trigger: CAGCTGCTTTCGTGTTGGTCATGAGGTGATGCTGAA...GGGCCCAGCGAGAGGCTGCTGCAGCTGCTGCTGTGGCTGCTGCAGCGAGCATTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593195.6
3UTR-3UTR CCA 90 bp CAATGCTCGCTGCAGCAGCCACAGCAGCAGCTGCAGCAGCCTCTCGCTGGGCCCCCGCAACTGCATTTCTaGGGTAAACTCTCCTTCTGC +
Preference number: 2 (lower is better)
Translates to: QCSLQQPQQQLQQPLAGPPQLHF*GKLSFC
Trigger: GCAGAAGGAGAGTTTACCCCAGAAATGCAGTTGCGG...GGGCCCAGCGAGAGGCTGCTGCAGCTGCTGCTGTGGCTGCTGCAGCGAGCATTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CCA 90 bp CAATGCTCGCTGCAGCAGCCACAGCAGCAGCTGCAGCAGCCTCTCGCTGGGCCCACAGAAACCAGGCTCTaGAGAAGCTGGGCTTTTCAT +
Preference number: 2 (lower is better)
Translates to: QCSLQQPQQQLQQPLAGPTETRL*RSWAFH
Trigger: ATGAAAAGCCCAGCTTCTCCAGAGCCTGGTTTCTGT...GGGCCCAGCGAGAGGCTGCTGCAGCTGCTGCTGTGGCTGCTGCAGCGAGCATTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR TCA 90 bp CAATGCTCGCTGCAGCAGCCACAGCAGCAGCTGCAGCAGCCTCTCGCTGGGCCCCATGAAGAACTACTTTaGGCTCCAGCGTTGTTTGGT +
Preference number: 2 (lower is better)
Translates to: QCSLQQPQQQLQQPLAGPHEELL*APALFG
Trigger: ACCAAACAACGCTGGAGCTCAAAGTAGTTCTTCATG...GGGCCCAGCGAGAGGCTGCTGCAGCTGCTGCTGTGGCTGCTGCAGCGAGCATTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR GCA 90 bp CAATGCTCGCTGCAGCAGCCACAGCAGCAGCTGCAGCAGCCTCTCGCTGGGCCCTGCCTTATCCGCAACTaGATTTCTGGGGTAAACTCT +
Preference number: 2 (lower is better)
Translates to: QCSLQQPQQQLQQPLAGPCLIRN*ISGVNS
Trigger: AGAGTTTACCCCAGAAATGCAGTTGCGGATAAGGCA...GGGCCCAGCGAGAGGCTGCTGCAGCTGCTGCTGTGGCTGCTGCAGCGAGCATTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CCA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTACACCACGGAGGAACTaGGAAACCAGAGGCCACGGT +
Preference number: 2 (lower is better)
Translates to: CAGPHHRTDDATLGLASATPRRN*ETRGHG
Trigger: ACCGTGGCCTCTGGTTTCCCAGTTCCTCCGTGGTGT...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR GCA 90 bp CAATGCTCGCTGCAGCAGCCACAGCAGCAGCTGCAGCAGCCTCTCGCTGGGCCCCTGTTTCCACCCTTGTaGTGCATATGCAAAGAATTC +
Preference number: 2 (lower is better)
Translates to: QCSLQQPQQQLQQPLAGPLFPPL*CICKEF
Trigger: GAATTCTTTGCATATGCAGCACAAGGGTGGAAACAG...GGGCCCAGCGAGAGGCTGCTGCAGCTGCTGCTGTGGCTGCTGCAGCGAGCATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CCA 90 bp CAATGCTCGCTGCAGCAGCCACAGCAGCAGCTGCAGCAGCCTCTCGCTGGGCCCTTATTTTGGGGGTACTaGTCTCTACTGCAGTTTCTG +
Preference number: 2 (lower is better)
Translates to: QCSLQQPQQQLQQPLAGPLFWGY*SLLQFL
Trigger: CAGAAACTGCAGTAGAGACCAGTACCCCCAAAATAA...GGGCCCAGCGAGAGGCTGCTGCAGCTGCTGCTGTGGCTGCTGCAGCGAGCATTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR CAA 90 bp CGCTGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTaGGCTTCAGCTTCTAAAACCTGGGACTTCATTACACCACGGAGG +
Preference number: 2 (lower is better)
Translates to: RCAGPHHRTDDATLG*ASASKTWDFITPRR
Trigger: CCTCCGTGGTGTAATGAAGTCCCAGGTTTTAGAAGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACAGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR TCA 90 bp ACAATGCTCGCTGCAGCAGCCACAGCAGCAGCTGCAGCAGCCTCTCGCTGGGCCATTCGAGTGTTAGTGTaGAGCATTGCATTCAGACAG +
Preference number: 2 (lower is better)
Translates to: TMLAAAATAAAAAASRWAIRVLV*SIAFRQ
Trigger: CTGTCTGAATGCAATGCTTCACACTAACACTCGAAT...GGCCCAGCGAGAGGCTGCTGCAGCTGCTGCTGTGGCTGCTGCAGCGAGCATTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR TCA 90 bp ACAATGCTCGCTGCAGCAGCCACAGCAGCAGCTGCAGCAGCCTCTCGCTGGGCCATTTCTAGAGCCTTCTaGAAATGGAGCCTTATCCAC +
Preference number: 2 (lower is better)
Translates to: TMLAAAATAAAAAASRWAISRAF*KWSLIH
Trigger: GTGGATAAGGCTCCATTTTCAGAAGGCTCTAGAAAT...GGCCCAGCGAGAGGCTGCTGCAGCTGCTGCTGTGGCTGCTGCAGCGAGCATTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CCA 90 bp TCCTGGACTTCCCATGGCTCCAGAGACAATGCTCGCTGCAGCAGCCACAGCAGCTGTCTGTGCAGAAACTaGAAGGCCAGAAGTCCCACA +
Preference number: 2 (lower is better)
Translates to: SWTSHGSRDNARCSSHSSCLCRN*KARSPT
Trigger: TGTGGGACTTCTGGCCTTCCAGTTTCTGCACAGACA...GCTGCTGTGGCTGCTGCAGCGAGCATTGTCTCTGGAGCCATGGGAAGTCCAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CCA 90 bp CCTTCCTTTGAGCTGAGCGGAGGAGGCAACCGGGTCTCTTTAGAGGTCTGGAAGCTGTGTTTCCCCTCCTaGAGAAGGCAGGCTGGTACA +
Preference number: 2 (lower is better)
Translates to: PSFELSGGGNRVSLEVWKLCFPS*RRQAGT
Trigger: TGTACCAGCCTGCCTTCTCCAGGAGGGGAAACACAG...CTTCCAGACCTCTAAAGAGACCCGGTTGCCTCCTCCGCTCAGCTCAAAGGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR TCA 90 bp AGCGGAGGAGGCAACCGGGTCTCTTTAGAGGTCTGGAAGAGATGGGCTCGAGCTCACAGATTCCTCTCTTaGCATGCCCAGCTTTTCTCC +
Preference number: 2 (lower is better)
Translates to: SGGGNRVSLEVWKRWARAHRFLS*HAQLFS
Trigger: GGAGAAAAGCTGGGCATGTCAAGAGAGGAATCTGTG...AGCTCGAGCCCATCTCTTCCAGACCTCTAAAGAGACCCGGTTGCCTCCTCCGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR GCA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTCACTGGAACTTATGCTaGTTTCCTCGGGTAAGGCTG +
Preference number: 2 (lower is better)
Translates to: CAGPHHRTDDATLGLASAHWNLC*FPRVRL
Trigger: CAGCCTTACCCGAGGAAAGCAGCATAAGTTCCAGTG...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR TCA 90 bp CCTTCCTTTGAGCTGAGCGGAGGAGGCAACCGGGTCTCTTTAGAGGTCTGGAAGCATTTCCGGAAGGAATaGACGGAACCACTCCAATGC +
Preference number: 2 (lower is better)
Translates to: PSFELSGGGNRVSLEVWKHFRKE*TEPLQC
Trigger: GCATTGGAGTGGTTCCGTTCATTCCTTCCGGAAATG...CTTCCAGACCTCTAAAGAGACCCGGTTGCCTCCTCCGCTCAGCTCAAAGGAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR GCA 90 bp AGGTTTGGCAGTGGCGGAAGACTCATCTTTCTGCGGGGAGAGTGGCTCTTCAGAGGTAAACTCTCCTTCTaGCAGTCGCTGTTTCCACCC +
Preference number: 2 (lower is better)
Translates to: RFGSGGRLIFLRGEWLFRGKLSF*QSLFPP
Trigger: GGGTGGAAACAGCGACTGGCAGAAGGAGAGTTTACC...TCTGAAGAGCCACTCTCCCCGCAGAAAGATGAGTCTTCCGCCACTGCCAAACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR GCA 90 bp AGGGGGAACCCTTGGTTCCTCTCTGGGAGGCTGTTCTTTCTCAGGTGGGCTGCTTTTTGGCTGTTGTTCTaGCAAGGCTGTCTGTGCAGA +
Preference number: 2 (lower is better)
Translates to: RGNPWFLSGRLFFLRWAAFWLLF*QGCLCR
Trigger: TCTGCACAGACAGCCTTGGCAGAACAACAGCCAAAA...AGCAGCCCACCTGAGAAAGAACAGCCTCCCAGAGAGGAACCAAGGGTTCCCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR TCA 90 bp GTTCCTCCCGCCACTGACAGATGTGCTAGTGGATGCTCGAGACTCAGGTTTGGAGCCAGAAGTCCCACATaGAGAACTACTTTGAGCTCC +
Preference number: 2 (lower is better)
Translates to: VPPATDRCASGCSRLRFGARSPT*RTTLSS
Trigger: GGAGCTCAAAGTAGTTCTTCATGTGGGACTTCTGGC...TCCAAACCTGAGTCTCGAGCATCCACTAGCACATCTGTCAGTGGCGGGAGGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR GCA 90 bp GGCTGGTACAGGCTCCCTCTGGGCTCTCAGAAGAAAAGGACGTTTCAGAGATGCAGACTAAATCCAACGTaGCATCTGCTGGGCATGACG +
Preference number: 2 (lower is better)
Translates to: GWYRLPLGSQKKRTFQRCRLNPT*HLLGMT
Trigger: CGTCATGCCCAGCAGATGGCACGTTGGATTTAGTCT...GCATCTCTGAAACGTCCTTTTCTTCTGAGAGCCCAGAGGGAGCCTGTACCAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR GCA 90 bp CTCCTGGACTTCCCATGGCTCCAGAGACAATGCTCGCTGCAGCAGCCACAGCAGGACACTAACTTGCTTTaGACTGCTGTGTTAGTAAGG +
Preference number: 2 (lower is better)
Translates to: LLDFPWLQRQCSLQQPQQDTNLL*TAVLVR
Trigger: CCTTACTAACACAGCAGTGCAAAGCAAGTTAGTGTC...CTGCTGTGGCTGCTGCAGCGAGCATTGTCTCTGGAGCCATGGGAAGTCCAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR GCA 90 bp CCTTCCTTTGAGCTGAGCGGAGGAGGCAACCGGGTCTCTTTAGAGGTCTGGAAGAGATGTGCTAGTGGATaGTCGAGACTCAGGTTTGGA +
Preference number: 2 (lower is better)
Translates to: PSFELSGGGNRVSLEVWKRCASG*SRLRFG
Trigger: TCCAAACCTGAGTCTCGAGCATCCACTAGCACATCT...CTTCCAGACCTCTAAAGAGACCCGGTTGCCTCCTCCGCTCAGCTCAAAGGAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CCA 90 bp GTTCTCGTCTTTCCACCCTCTCCTGGACTTCCCATGGCTCCAGAGACAATGCTCCCGCAACTGCATTTCTaGGGTAAACTCTCCTTCTGC +
Preference number: 2 (lower is better)
Translates to: VLVFPPSPGLPMAPETMLPQLHF*GKLSFC
Trigger: GCAGAAGGAGAGTTTACCCCAGAAATGCAGTTGCGG...GAGCATTGTCTCTGGAGCCATGGGAAGTCCAGGAGAGGGTGGAAAGACGAGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CCA 90 bp GCAGTTTCTGGAAGTTTACTTGGGTTAAGAGACTGCTGTAGTACAGTGGTGGTCCTGGAGAAGGCAGGCTaGTACAGGCTCCCTCTGGGC +
Preference number: 2 (lower is better)
Translates to: AVSGSLLGLRDCCSTVVVLEKAG*YRLPLG
Trigger: GCCCAGAGGGAGCCTGTACCAGCCTGCCTTCTCCAG...GACCACCACTGTACTACAGCAGTCTCTTAACCCAAGTAAACTTCCAGAAACTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CCA 90 bp CTCCTGGACTTCCCATGGCTCCAGAGACAATGCTCGCTGCAGCAGCCACAGCAGAGGGCTCTGATGACTTaGAAGTATGTGAGGTTTCTA +
Preference number: 2 (lower is better)
Translates to: LLDFPWLQRQCSLQQPQQRALMT*KYVRFL
Trigger: TAGAAACCTCACATACTTCCAAGTCATCAGAGCCCT...CTGCTGTGGCTGCTGCAGCGAGCATTGTCTCTGGAGCCATGGGAAGTCCAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR TCA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTTGCACTATCAACAACTaGTTCTCCAAGCCTGTTATG +
Preference number: 2 (lower is better)
Translates to: CAGPHHRTDDATLGLASACTINN*FSKPVM
Trigger: CATAACAGGCTTGGAGAATCAGTTGTTGATAGTGCA...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR TCA 90 bp ACAGTGGTGGTCTCCCGGAGGTGGGCAGACTTGTTGCTAGGAGATCTACAGTTTGCCAGAAGTCCCACATaGAGAACTACTTTGAGCTCC +
Preference number: 2 (lower is better)
Translates to: TVVVSRRWADLLLGDLQFARSPT*RTTLSS
Trigger: GGAGCTCAAAGTAGTTCTTCATGTGGGACTTCTGGC...AAACTGTAGATCTCCTAGCAACAAGTCTGCCCACCTCCGGGAGACCACCACTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR TCA 90 bp TGCTCTTTGATGTGTGCCAGAGTTCTCGTCTTTCCACCCTCTCCTGGACTTCCCAAGTGGTCTCAGAGGTaGGAAGCATGGAAGACACTG +
Preference number: 2 (lower is better)
Translates to: CSLMCARVLVFPPSPGLPKWSQR*EAWKTL
Trigger: CAGTGTCTTCCATGCTTCTCACCTCTGAGACCACTT...GGGAAGTCCAGGAGAGGGTGGAAAGACGAGAACTCTGGCACACATCAAAGAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR TCA 90 bp CCTTCCTTTGAGCTGAGCGGAGGAGGCAACCGGGTCTCTTTAGAGGTCTGGAAGATGTTCCGGGTTGACTaGTCATCTTCTATCCTAGCT +
Preference number: 2 (lower is better)
Translates to: PSFELSGGGNRVSLEVWKMFRVD*SSSILA
Trigger: AGCTAGGATAGAAGATGATCAGTCAACCCGGAACAT...CTTCCAGACCTCTAAAGAGACCCGGTTGCCTCCTCCGCTCAGCTCAAAGGAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR GCA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTTACACCTCAGGCATATaGATATCTTATAGGAGGAGG +
Preference number: 2 (lower is better)
Translates to: CAGPHHRTDDATLGLASAYTSGI*ISYRRR
Trigger: CCTCCTCCTATAAGATATGCATATGCCTGAGGTGTA...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR GCA 90 bp CCTTCCTTTGAGCTGAGCGGAGGAGGCAACCGGGTCTCTTTAGAGGTCTGGAAGAGCTTAGCCTTTGTCTaGTCTTTGATGTGTGCCAGA +
Preference number: 2 (lower is better)
Translates to: PSFELSGGGNRVSLEVWKSLAFV*SLMCAR
Trigger: TCTGGCACACATCAAAGAGCAGACAAAGGCTAAGCT...CTTCCAGACCTCTAAAGAGACCCGGTTGCCTCCTCCGCTCAGCTCAAAGGAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CCA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTTATGCTAATCGGACCTaGATGATAGAATCCATGCAC +
Preference number: 2 (lower is better)
Translates to: CAGPHHRTDDATLGLASAYANRT*MIESMH
Trigger: GTGCATGGATTCTATCATCCAGGTCCGATTAGCATA...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR CCA 90 bp GTTCTCGTCTTTCCACCCTCTCCTGGACTTCCCATGGCTCCAGAGACAATGCTCCCATTTTCTTCTCCATaGGCATTTGCCTCGGCCATA +
Preference number: 2 (lower is better)
Translates to: VLVFPPSPGLPMAPETMLPFSSP*AFASAI
Trigger: TATGGCCGAGGCAAATGCCCATGGAGAAGAAAATGG...GAGCATTGTCTCTGGAGCCATGGGAAGTCCAGGAGAGGGTGGAAAGACGAGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CCA 90 bp GGCTGGTACAGGCTCCCTCTGGGCTCTCAGAAGAAAAGGACGTTTCAGAGATGCCCATTTTCTTCTCCATaGGCATTTGCCTCGGCCATA +
Preference number: 2 (lower is better)
Translates to: GWYRLPLGSQKKRTFQRCPFSSP*AFASAI
Trigger: TATGGCCGAGGCAAATGCCCATGGAGAAGAAAATGG...GCATCTCTGAAACGTCCTTTTCTTCTGAGAGCCCAGAGGGAGCCTGTACCAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CCA 90 bp GGCTGGTACAGGCTCCCTCTGGGCTCTCAGAAGAAAAGGACGTTTCAGAGATGCAGGCTCTGGAGAAGCTaGGCTTTTCATGCTTTTTGG +
Preference number: 2 (lower is better)
Translates to: GWYRLPLGSQKKRTFQRCRLWRS*AFHAFW
Trigger: CCAAAAAGCATGAAAAGCCCAGCTTCTCCAGAGCCT...GCATCTCTGAAACGTCCTTTTCTTCTGAGAGCCCAGAGGGAGCCTGTACCAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CCA 90 bp GCAGTTTCTGGAAGTTTACTTGGGTTAAGAGACTGCTGTAGTACAGTGGTGGTCTATCTGCGAGGGTCCTaGCTCCTGTGTTCCTCCCGC +
Preference number: 2 (lower is better)
Translates to: AVSGSLLGLRDCCSTVVVYLRGS*LLCSSR
Trigger: GCGGGAGGAACACAGGAGCCAGGACCCTCGCAGATA...GACCACCACTGTACTACAGCAGTCTCTTAACCCAAGTAAACTTCCAGAAACTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR TCA 90 bp GCCAGAGTTCTCGTCTTTCCACCCTCTCCTGGACTTCCCATGGCTCCAGAGACATCTGCAATTTCCTCCTaGATTACAGATTCTTCAGGG +
Preference number: 2 (lower is better)
Translates to: ARVLVFPPSPGLPMAPETSAISS*ITDSSG
Trigger: CCCTGAAGAATCTGTAATTCAGGAGGAAATTGCAGA...TGTCTCTGGAGCCATGGGAAGTCCAGGAGAGGGTGGAAAGACGAGAACTCTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR GCA 90 bp GCCAGAGTTCTCGTCTTTCCACCCTCTCCTGGACTTCCCATGGCTCCAGAGACACTTCTTTTCTGCTGCTaGCTCAAAGCCTGTTTAAGA +
Preference number: 2 (lower is better)
Translates to: ARVLVFPPSPGLPMAPETLLFCC*LKACLR
Trigger: TCTTAAACAGGCTTTGAGGCAGCAGCAGAAAAGAAG...TGTCTCTGGAGCCATGGGAAGTCCAGGAGAGGGTGGAAAGACGAGAACTCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR GCA 90 bp CCTTCCTTTGAGCTGAGCGGAGGAGGCAACCGGGTCTCTTTAGAGGTCTGGAAGGTTATCTTCAGGAGGTaGTATTTGGGGTTCTTCATG +
Preference number: 2 (lower is better)
Translates to: PSFELSGGGNRVSLEVWKVIFRR*YLGFFM
Trigger: CATGAAGAACCCCAAATAGCACCTCCTGAAGATAAC...CTTCCAGACCTCTAAAGAGACCCGGTTGCCTCCTCCGCTCAGCTCAAAGGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR CAA 90 bp CTCCCGCCACTGACAGATGTGCTAGTGGATGCTCGAGACTCAGGTTaGGAGACTGGTTGGCTCTTGATTATAAAAGGTGGCCCAATTTTG +
Preference number: 2 (lower is better)
Translates to: LPPLTDVLVDARDSG*ETGWLLIIKGGPIL
Trigger: CAAAATTGGGCCACCTTTTATAATCAAGAGCCAACCAGTCTCCAAACCTGAGTCTCGAGCATCCACTAGCACATCTGTCAGTGGCGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR CAA 90 bp AGGCAACCGGGTCTCTTTAGAGGTCTGGAAGAGATGGGCTCGAGCTaGATGCTTTGCAAAGAGCTTAGCCTTTGTCTGCTCTTTGATGTG +
Preference number: 2 (lower is better)
Translates to: RQPGLFRGLEEMGSS*MLCKELSLCLLFDV
Trigger: CACATCAAAGAGCAGACAAAGGCTAAGCTCTTTGCAAAGCATCAAGCTCGAGCCCATCTCTTCCAGACCTCTAAAGAGACCCGGTTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR CAA 90 bp GACTGCTGTAGTACAGTGGTGGTCTCCCGGAGGTGGGCAGACTTGTaGCTAGGAGATCTACAGTTTGGATTGACAATAATGACACCAGTC +
Preference number: 2 (lower is better)
Translates to: DCCSTVVVSRRWADL*LGDLQFGLTIMTPV
Trigger: GACTGGTGTCATTATTGTCAATCCAAACTGTAGATCTCCTAGCAACAAGTCTGCCCACCTCCGGGAGACCACCACTGTACTACAGCAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR TCA 90 bp GGCTGGTACAGGCTCCCTCTGGGCTCTCAGAAGAAAAGGACGTTTCAGAGATGCCAACACGAAAGCAGCTaGGGCTCTAATATAATCATC +
Preference number: 2 (lower is better)
Translates to: GWYRLPLGSQKKRTFQRCQHESS*GSNIII
Trigger: GATGATTATATTAGAGCCTCAGCTGCTTTCGTGTTG...GCATCTCTGAAACGTCCTTTTCTTCTGAGAGCCCAGAGGGAGCCTGTACCAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593195.6
3UTR-3UTR TCA 90 bp GTTCTCGTCTTTCCACCCTCTCCTGGACTTCCCATGGCTCCAGAGACAATGCTCTTAGAGCTGAAGTACTaGGGCGTAAAATTCCATCAC +
Preference number: 2 (lower is better)
Translates to: VLVFPPSPGLPMAPETMLLELKY*GVKFHH
Trigger: GTGATGGAATTTTACGCCTCAGTACTTCAGCTCTAA...GAGCATTGTCTCTGGAGCCATGGGAAGTCCAGGAGAGGGTGGAAAGACGAGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR TCA 90 bp GGCAGGCTGGTACAGGCTCCCTCTGGGCTCTCAGAAGAAAAGGACGTTTCAGAGGATCAAGATATCCTCTaGCTCCAATTCTGCCATTAT +
Preference number: 2 (lower is better)
Translates to: GRLVQAPSGLSEEKDVSEDQDIL*LQFCHY
Trigger: ATAATGGCAGAATTGGAGTCAGAGGATATCTTGATC...CTCTGAAACGTCCTTTTCTTCTGAGAGCCCAGAGGGAGCCTGTACCAGCCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR TCA 90 bp GTTCTCGTCTTTCCACCCTCTCCTGGACTTCCCATGGCTCCAGAGACAATGCTCTCTGTGTCACTGACATaGGTCATAGATGAAGTGGAA +
Preference number: 2 (lower is better)
Translates to: VLVFPPSPGLPMAPETMLSVSLT*VIDEVE
Trigger: TTCCACTTCATCTATGACTCATGTCAGTGACACAGA...GAGCATTGTCTCTGGAGCCATGGGAAGTCCAGGAGAGGGTGGAAAGACGAGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR TCA 90 bp TACAGTGGTGGTCTCCCGGAGGTGGGCAGACTTGTTGCTAGGAGATCTACAGTTCTCTACTGCAGTTTCTaGCTCCTTATGTTCTGTGTC +
Preference number: 2 (lower is better)
Translates to: YSGGLPEVGRLVARRSTVLYCSF*LLMFCV
Trigger: GACACAGAACATAAGGAGTCAGAAACTGCAGTAGAG...AACTGTAGATCTCCTAGCAACAAGTCTGCCCACCTCCGGGAGACCACCACTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR TCA 90 bp ACAGTGGTGGTCTCCCGGAGGTGGGCAGACTTGTTGCTAGGAGATCTACAGTTTGATTTACAGGTTTGCTaGCTCAGGGTCTTATTGTGC +
Preference number: 2 (lower is better)
Translates to: TVVVSRRWADLLLGDLQFDLQVC*LRVLLC
Trigger: GCACAATAAGACCCTGAGTCAGCAAACCTGTAAATC...AAACTGTAGATCTCCTAGCAACAAGTCTGCCCACCTCCGGGAGACCACCACTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR GCA 90 bp TACAGTGGTGGTCTCCCGGAGGTGGGCAGACTTGTTGCTAGGAGATCTACAGTTGAAGGCGAATCCGACTaGTCATCAGACACCTTTAAT +
Preference number: 2 (lower is better)
Translates to: YSGGLPEVGRLVARRSTVEGESD*SSDTFN
Trigger: ATTAAAGGTGTCTGATGAGCAGTCGGATTCGCCTTC...AACTGTAGATCTCCTAGCAACAAGTCTGCCCACCTCCGGGAGACCACCACTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR GCA 90 bp AGGGGGAACCCTTGGTTCCTCTCTGGGAGGCTGTTCTTTCTCAGGTGGGCTGCTTTTCCACCCTTGTGCTaGATATGCAAAGAATTCATT +
Preference number: 2 (lower is better)
Translates to: RGNPWFLSGRLFFLRWAAFPPLC*ICKEFI
Trigger: AATGAATTCTTTGCATATGCAGCACAAGGGTGGAAA...AGCAGCCCACCTGAGAAAGAACAGCCTCCCAGAGAGGAACCAAGGGTTCCCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR GCA 90 bp CCTTCCTTTGAGCTGAGCGGAGGAGGCAACCGGGTCTCTTTAGAGGTCTGGAAGATTCCTCTCTTGACATaGCCAGCTTTTCTCCATAAA +
Preference number: 2 (lower is better)
Translates to: PSFELSGGGNRVSLEVWKIPLLT*PAFLHK
Trigger: TTTATGGAGAAAAGCTGGGCATGTCAAGAGAGGAAT...CTTCCAGACCTCTAAAGAGACCCGGTTGCCTCCTCCGCTCAGCTCAAAGGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR GCA 90 bp AGGTTTGGCAGTGGCGGAAGACTCATCTTTCTGCGGGGAGAGTGGCTCTTCAGAGTTATCTTCAGGAGGTaGTATTTGGGGTTCTTCATG +
Preference number: 2 (lower is better)
Translates to: RFGSGGRLIFLRGEWLFRVIFRR*YLGFFM
Trigger: CATGAAGAACCCCAAATAGCACCTCCTGAAGATAAC...TCTGAAGAGCCACTCTCCCCGCAGAAAGATGAGTCTTCCGCCACTGCCAAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CCA 90 bp CTTGGGTTAAGAGACTGCTGTAGTACAGTGGTGGTCTCCCGGAGGTGGGCAGACGACAAGAATAGATCCTaGGGTTTCTATGTCAATGTC +
Preference number: 2 (lower is better)
Translates to: LGLRDCCSTVVVSRRWADDKNRS*GFYVNV
Trigger: GACATTGACATAGAAACCCCAGGATCTATTCTTGTC...GTCTGCCCACCTCCGGGAGACCACCACTGTACTACAGCAGTCTCTTAACCCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593195.6
3UTR-3UTR CCA 90 bp GACAGATGTGCTAGTGGATGCTCGAGACTCAGGTTTGGAGACTGGTTGGCTCTTAGGCTCTGGAGAAGCTaGGCTTTTCATGCTTTTTGG +
Preference number: 2 (lower is better)
Translates to: DRCASGCSRLRFGDWLALRLWRS*AFHAFW
Trigger: CCAAAAAGCATGAAAAGCCCAGCTTCTCCAGAGCCT...AAGAGCCAACCAGTCTCCAAACCTGAGTCTCGAGCATCCACTAGCACATCTGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR CAA 90 bp AGAGACTGCTGTAGTACAGTGGTGGTCTCCCGGAGGTGGGCAGACTaGTTGCTAGGAGATCTACAGTTTGGATTGACAATAATGACACCA +
Preference number: 2 (lower is better)
Translates to: RDCCSTVVVSRRWAD*LLGDLQFGLTIMTP
Trigger: TGGTGTCATTATTGTCAATCCAAACTGTAGATCTCCTAGCAACAAGTCTGCCCACCTCCGGGAGACCACCACTGTACTACAGCAGTCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR TCA 90 bp TGCTCTTTGATGTGTGCCAGAGTTCTCGTCTTTCCACCCTCTCCTGGACTTCCCATTCGAGTGTTAGTGTaGAGCATTGCATTCAGACAG +
Preference number: 2 (lower is better)
Translates to: CSLMCARVLVFPPSPGLPIRVLV*SIAFRQ
Trigger: CTGTCTGAATGCAATGCTTCACACTAACACTCGAAT...GGGAAGTCCAGGAGAGGGTGGAAAGACGAGAACTCTGGCACACATCAAAGAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR TCA 90 bp TTACTTGGGTTAAGAGACTGCTGTAGTACAGTGGTGGTCTCCCGGAGGTGGGCATTAGAGCTGAAGTACTaGGGCGTAAAATTCCATCAC +
Preference number: 2 (lower is better)
Translates to: LLGLRDCCSTVVVSRRWALELKY*GVKFHH
Trigger: GTGATGGAATTTTACGCCTCAGTACTTCAGCTCTAA...TGCCCACCTCCGGGAGACCACCACTGTACTACAGCAGTCTCTTAACCCAAGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR TCA 90 bp CTTTGTCTGCTCTTTGATGTGTGCCAGAGTTCTCGTCTTTCCACCCTCTCCTGGCATGAAGAACTACTTTaGGCTCCAGCGTTGTTTGGT +
Preference number: 2 (lower is better)
Translates to: LCLLFDVCQSSRLSTLSWHEELL*APALFG
Trigger: ACCAAACAACGCTGGAGCTCAAAGTAGTTCTTCATG...CCAGGAGAGGGTGGAAAGACGAGAACTCTGGCACACATCAAAGAGCAGACAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR TCA 90 bp GACAGATGTGCTAGTGGATGCTCGAGACTCAGGTTTGGAGACTGGTTGGCTCTTCTCTACTGCAGTTTCTaGCTCCTTATGTTCTGTGTC +
Preference number: 2 (lower is better)
Translates to: DRCASGCSRLRFGDWLALLYCSF*LLMFCV
Trigger: GACACAGAACATAAGGAGTCAGAAACTGCAGTAGAG...AAGAGCCAACCAGTCTCCAAACCTGAGTCTCGAGCATCCACTAGCACATCTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR TCA 90 bp ACAGTGGTGGTCTCCCGGAGGTGGGCAGACTTGTTGCTAGGAGATCTACAGTTTCTCAGTGTCAACATGTaGTTTACAGGTTTGCTGACT +
Preference number: 2 (lower is better)
Translates to: TVVVSRRWADLLLGDLQFLSVNM*FTGLLT
Trigger: AGTCAGCAAACCTGTAAATCACATGTTGACACTGAG...AAACTGTAGATCTCCTAGCAACAAGTCTGCCCACCTCCGGGAGACCACCACTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR GCA 90 bp AAGAGTAGCACAGAAACCAGGCTCTGGAGAAGCTGGGCTTTTCATGCTTTTTGGTTCTCCATGGGCATTTaGCTCGGCCATATCTGTACC +
Preference number: 2 (lower is better)
Translates to: KSSTETRLWRSWAFHAFWFSMGI*LGHICT
Trigger: GGTACAGATATGGCCGAGGCAAATGCCCATGGAGAA...CCAAAAAGCATGAAAAGCCCAGCTTCTCCAGAGCCTGGTTTCTGTGCTACTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR GCA 90 bp AGGTTTGGCAGTGGCGGAAGACTCATCTTTCTGCGGGGAGAGTGGCTCTTCAGAGCTTCATCAGTTACCTaGTTCGAACAAACTCCATTT +
Preference number: 2 (lower is better)
Translates to: RFGSGGRLIFLRGEWLFRASSVT*FEQTPF
Trigger: AAATGGAGTTTGTTCGAAGCAGGTAACTGATGAAGC...TCTGAAGAGCCACTCTCCCCGCAGAAAGATGAGTCTTCCGCCACTGCCAAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR GCA 90 bp TACAGTGGTGGTCTCCCGGAGGTGGGCAGACTTGTTGCTAGGAGATCTACAGTTATCTCGAGTGGAAGATaGTTCATCAGTTACCTGCTT +
Preference number: 2 (lower is better)
Translates to: YSGGLPEVGRLVARRSTVISSGR*FISYLL
Trigger: AAGCAGGTAACTGATGAAGCATCTTCCACTCGAGAT...AACTGTAGATCTCCTAGCAACAAGTCTGCCCACCTCCGGGAGACCACCACTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR GCA 90 bp GCCAGAGTTCTCGTCTTTCCACCCTCTCCTGGACTTCCCATGGCTCCAGAGACATTTCCACCCTTGTGCTaGATATGCAAAGAATTCATT +
Preference number: 2 (lower is better)
Translates to: ARVLVFPPSPGLPMAPETFPPLC*ICKEFI
Trigger: AATGAATTCTTTGCATATGCAGCACAAGGGTGGAAA...TGTCTCTGGAGCCATGGGAAGTCCAGGAGAGGGTGGAAAGACGAGAACTCTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR GCA 90 bp CTGATGACTTGGAAGTATGTGAGGTTTCTAACCGACTCTGTGTACTCCCTTGCTGGTAAACTCTCCTTCTaGCAGTCGCTGTTTCCACCC +
Preference number: 2 (lower is better)
Translates to: LMTWKYVRFLTDSVYSLAGKLSF*QSLFPP
Trigger: GGGTGGAAACAGCGACTGGCAGAAGGAGAGTTTACC...AGCAAGGGAGTACACAGAGTCGGTTAGAAACCTCACATACTTCCAAGTCATCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR GCA 90 bp GTTCCTCCCGCCACTGACAGATGTGCTAGTGGATGCTCGAGACTCAGGTTTGGAATTCCTCTCTTGACATaGCCAGCTTTTCTCCATAAA +
Preference number: 2 (lower is better)
Translates to: VPPATDRCASGCSRLRFGIPLLT*PAFLHK
Trigger: TTTATGGAGAAAAGCTGGGCATGTCAAGAGAGGAAT...TCCAAACCTGAGTCTCGAGCATCCACTAGCACATCTGTCAGTGGCGGGAGGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR GCA 90 bp TACAGTGGTGGTCTCCCGGAGGTGGGCAGACTTGTTGCTAGGAGATCTACAGTTGTTATCTTCAGGAGGTaGTATTTGGGGTTCTTCATG +
Preference number: 2 (lower is better)
Translates to: YSGGLPEVGRLVARRSTVVIFRR*YLGFFM
Trigger: CATGAAGAACCCCAAATAGCACCTCCTGAAGATAAC...AACTGTAGATCTCCTAGCAACAAGTCTGCCCACCTCCGGGAGACCACCACTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR GCA 90 bp CCTTCCTTTGAGCTGAGCGGAGGAGGCAACCGGGTCTCTTTAGAGGTCTGGAAGATTCCAAAGCTGTGTTaGTCTGCAGTTTTTCTCTTT +
Preference number: 2 (lower is better)
Translates to: PSFELSGGGNRVSLEVWKIPKLC*SAVFLF
Trigger: AAAGAGAAAAACTGCAGAGCAACACAGCTTTGGAAT...CTTCCAGACCTCTAAAGAGACCCGGTTGCCTCCTCCGCTCAGCTCAAAGGAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CCA 90 bp TACAGTGGTGGTCTCCCGGAGGTGGGCAGACTTGTTGCTAGGAGATCTACAGTTTTATTTTGGGGGTACTaGTCTCTACTGCAGTTTCTG +
Preference number: 2 (lower is better)
Translates to: YSGGLPEVGRLVARRSTVLFWGY*SLLQFL
Trigger: CAGAAACTGCAGTAGAGACCAGTACCCCCAAAATAA...AACTGTAGATCTCCTAGCAACAAGTCTGCCCACCTCCGGGAGACCACCACTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CCA 90 bp CGGAGGTGGGCAGACTTGTTGCTAGGAGATCTACAGTTTGGATTGACAATAATGGGTACAGGCTCCCTCTaGGCTCTCAGAAGAAAAGGA +
Preference number: 2 (lower is better)
Translates to: RRWADLLLGDLQFGLTIMGTGSL*ALRRKG
Trigger: TCCTTTTCTTCTGAGAGCCCAGAGGGAGCCTGTACC...CATTATTGTCAATCCAAACTGTAGATCTCCTAGCAACAAGTCTGCCCACCTCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CCA 90 bp GCAGTTTCTGGAAGTTTACTTGGGTTAAGAGACTGCTGTAGTACAGTGGTGGTCGGTACAGGCTCCCTCTaGGCTCTCAGAAGAAAAGGA +
Preference number: 2 (lower is better)
Translates to: AVSGSLLGLRDCCSTVVVGTGSL*ALRRKG
Trigger: TCCTTTTCTTCTGAGAGCCCAGAGGGAGCCTGTACC...GACCACCACTGTACTACAGCAGTCTCTTAACCCAAGTAAACTTCCAGAAACTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CCA 90 bp TCTCTGAATCTCTACTTTCATTTCTTATCCCATCAGGTGACTTGGAGGGCTCTGCTGTGTTTCCCCTCCTaGAGAAGGCAGGCTGGTACA +
Preference number: 2 (lower is better)
Translates to: SLNLYFHFLSHQVTWRALLCFPS*RRQAGT
Trigger: TGTACCAGCCTGCCTTCTCCAGGAGGGGAAACACAG...CAGAGCCCTCCAAGTCACCTGATGGGATAAGAAATGAAAGTAGAGATTCAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR TCA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTAAACCTCTGCAAGGTCTaGAGCCAGAATGAATGGGTG +
Preference number: 2 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVNLCKV*SQNEWV
Trigger: CACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTT...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR TCA 90 bp GCAGTTTCTGGAAGTTTACTTGGGTTAAGAGACTGCTGTAGTACAGTGGTGGTCCATTTCCGGAAGGAATaGACGGAACCACTCCAATGC +
Preference number: 2 (lower is better)
Translates to: AVSGSLLGLRDCCSTVVVHFRKE*TEPLQC
Trigger: GCATTGGAGTGGTTCCGTTCATTCCTTCCGGAAATG...GACCACCACTGTACTACAGCAGTCTCTTAACCCAAGTAAACTTCCAGAAACTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR TCA 90 bp CCATCAGGTGACTTGGAGGGCTCTGATGACTTGGAAGTATGTGAGGTTTCTAACGAGAGCATAGAGGCCTaGCTTTCCAGGGATTTTGAA +
Preference number: 2 (lower is better)
Translates to: PSGDLEGSDDLEVCEVSNESIEA*LSRDFE
Trigger: TTCAAAATCCCTGGAAAGTCAGGCCTCTATGCTCTC...GTTAGAAACCTCACATACTTCCAAGTCATCAGAGCCCTCCAAGTCACCTGATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR TCA 90 bp CTTTGTCTGCTCTTTGATGTGTGCCAGAGTTCTCGTCTTTCCACCCTCTCCTGGTTAGAGCTGAAGTACTaGGGCGTAAAATTCCATCAC +
Preference number: 2 (lower is better)
Translates to: LCLLFDVCQSSRLSTLSWLELKY*GVKFHH
Trigger: GTGATGGAATTTTACGCCTCAGTACTTCAGCTCTAA...CCAGGAGAGGGTGGAAAGACGAGAACTCTGGCACACATCAAAGAGCAGACAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR TCA 90 bp GACAGATGTGCTAGTGGATGCTCGAGACTCAGGTTTGGAGACTGGTTGGCTCTTTCTGCAATTTCCTCCTaGATTACAGATTCTTCAGGG +
Preference number: 2 (lower is better)
Translates to: DRCASGCSRLRFGDWLALSAISS*ITDSSG
Trigger: CCCTGAAGAATCTGTAATTCAGGAGGAAATTGCAGA...AAGAGCCAACCAGTCTCCAAACCTGAGTCTCGAGCATCCACTAGCACATCTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR TCA 90 bp GACAGATGTGCTAGTGGATGCTCGAGACTCAGGTTTGGAGACTGGTTGGCTCTTTCTGTGTCACTGACATaGGTCATAGATGAAGTGGAA +
Preference number: 2 (lower is better)
Translates to: DRCASGCSRLRFGDWLALSVSLT*VIDEVE
Trigger: TTCCACTTCATCTATGACTCATGTCAGTGACACAGA...AAGAGCCAACCAGTCTCCAAACCTGAGTCTCGAGCATCCACTAGCACATCTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR GCA 90 bp GGAAGTTTACTTGGGTTAAGAGACTGCTGTAGTACAGTGGTGGTCTCCCGGAGGATCTTCAGACGGAAATaGTTCAGGAGCAATGGAAGA +
Preference number: 2 (lower is better)
Translates to: GSLLGLRDCCSTVVVSRRIFRRK*FRSNGR
Trigger: TCTTCCATTGCTCCTGAAGCATTTCCGTCTGAAGAT...CCTCCGGGAGACCACCACTGTACTACAGCAGTCTCTTAACCCAAGTAAACTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CCA 90 bp TATGATGGGTTCGGGAGTATTAGACAGATTCTTCTGCTGGGAGGTAAGGTTCTCAGCTCCAGCGTTGTTTaGTCCAGTAGTGAGCTTCAC +
Preference number: 2 (lower is better)
Translates to: YDGFGSIRQILLLGGKVLSSSVV*SSSELH
Trigger: GTGAAGCTCACTACTGGACCAAACAACGCTGGAGCT...GAGAACCTTACCTCCCAGCAGAAGAATCTGTCTAATACTCCCGAACCCATCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CCA 90 bp CCATCAGGTGACTTGGAGGGCTCTGATGACTTGGAAGTATGTGAGGTTTCTAACACAGAAACCAGGCTCTaGAGAAGCTGGGCTTTTCAT +
Preference number: 2 (lower is better)
Translates to: PSGDLEGSDDLEVCEVSNTETRL*RSWAFH
Trigger: ATGAAAAGCCCAGCTTCTCCAGAGCCTGGTTTCTGT...GTTAGAAACCTCACATACTTCCAAGTCATCAGAGCCCTCCAAGTCACCTGATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CCA 90 bp GACAGATGTGCTAGTGGATGCTCGAGACTCAGGTTTGGAGACTGGTTGGCTCTTAAGGAAGTGGCAAACTaGATACAAAAGTGGTCTCAG +
Preference number: 2 (lower is better)
Translates to: DRCASGCSRLRFGDWLALKEVAN*IQKWSQ
Trigger: CTGAGACCACTTTTGTATCCAGTTTGCCACTTCCTT...AAGAGCCAACCAGTCTCCAAACCTGAGTCTCGAGCATCCACTAGCACATCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR CAA 90 bp CTTTCATTTCTTATCCCATCAGGTGACTTGGAGGGCTCTGATGACTaGGAAGTATGTGAGGTTTCTAACCGACTCTGTGTACTCCCTTGC +
Preference number: 2 (lower is better)
Translates to: LSFLIPSGDLEGSDD*EVCEVSNRLCVLPC
Trigger: GCAAGGGAGTACACAGAGTCGGTTAGAAACCTCACATACTTCCAAGTCATCAGAGCCCTCCAAGTCACCTGATGGGATAAGAAATGAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR CAA 90 bp TCCCGGAGGTGGGCAGACTTGTTGCTAGGAGATCTACAGTTTGGATaGACAATAATGACACCAGTCGAACCTTCCATTTTTGTTTCAGGG +
Preference number: 2 (lower is better)
Translates to: SRRWADLLLGDLQFG*TIMTPVEPSIFVSG
Trigger: CCCTGAAACAAAAATGGAAGGTTCGACTGGTGTCATTATTGTCAATCCAAACTGTAGATCTCCTAGCAACAAGTCTGCCCACCTCCGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR TCA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTGAAAACAGAGCCTCCTaGACTACGGCTGTCCTCTGG +
Preference number: 2 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPENRAS*TTAVLW
Trigger: CCAGAGGACAGCCGTAGTTCAGGAGGCTCTGTTTTC...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR TCA 90 bp CGGAGGTGGGCAGACTTGTTGCTAGGAGATCTACAGTTTGGATTGACAATAATGGAGAGCATAGAGGCCTaGCTTTCCAGGGATTTTGAA +
Preference number: 2 (lower is better)
Translates to: RRWADLLLGDLQFGLTIMESIEA*LSRDFE
Trigger: TTCAAAATCCCTGGAAAGTCAGGCCTCTATGCTCTC...CATTATTGTCAATCCAAACTGTAGATCTCCTAGCAACAAGTCTGCCCACCTCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR TCA 90 bp TACAGTGGTGGTCTCCCGGAGGTGGGCAGACTTGTTGCTAGGAGATCTACAGTTTCAGGTATTGTCTTATaGTTTTCATCCTGGCATTCA +
Preference number: 2 (lower is better)
Translates to: YSGGLPEVGRLVARRSTVSGIVL*FSSWHS
Trigger: TGAATGCCAGGATGAAAATCATAAGACAATACCTGA...AACTGTAGATCTCCTAGCAACAAGTCTGCCCACCTCCGGGAGACCACCACTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR TCA 90 bp TTACTTGGGTTAAGAGACTGCTGTAGTACAGTGGTGGTCTCCCGGAGGTGGGCATCACAGACTTCTAACTaGTCGATAACAACTGTCATT +
Preference number: 2 (lower is better)
Translates to: LLGLRDCCSTVVVSRRWASQTSN*SITTVI
Trigger: AATGACAGTTGTTATCGATCAGTTAGAAGTCTGTGA...TGCCCACCTCCGGGAGACCACCACTGTACTACAGCAGTCTCTTAACCCAAGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR TCA 90 bp GCTAGTGGATGCTCGAGACTCAGGTTTGGAGACTGGTTGGCTCTTGATTATAAACCAATTTTGGAAAGCTaGATCTTGAGAGGGGGAACC +
Preference number: 2 (lower is better)
Translates to: ASGCSRLRFGDWLALDYKPILES*ILRGGT
Trigger: GGTTCCCCCTCTCAAGATTCAGCTTTCCAAAATTGG...TTTATAATCAAGAGCCAACCAGTCTCCAAACCTGAGTCTCGAGCATCCACTAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR GCA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTAGCCATTCAGTTGGGATaGATCCTCCCCTTTATGAGA +
Preference number: 2 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVAIQLG*ILPFMR
Trigger: TCTCATAAAGGGGAGGATGCATCCCAACTGAATGGC...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR GCA 90 bp GACAGATGTGCTAGTGGATGCTCGAGACTCAGGTTTGGAGACTGGTTGGCTCTTCTCAGGGTCTTATTGTaGAAATCTTCAGACGGAAAT +
Preference number: 2 (lower is better)
Translates to: DRCASGCSRLRFGDWLALLRVLL*KSSDGN
Trigger: ATTTCCGTCTGAAGATTTGCACAATAAGACCCTGAG...AAGAGCCAACCAGTCTCCAAACCTGAGTCTCGAGCATCCACTAGCACATCTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CCA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTAAGTGAGCCATTCAGTTaGGATGCATCCTCCCCTTTA +
Preference number: 2 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVSEPFS*DASSPL
Trigger: TAAAGGGGAGGATGCATCCCAACTGAATGGCTCACT...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR CCA 90 bp TGCTCTTTGATGTGTGCCAGAGTTCTCGTCTTTCCACCCTCTCCTGGACTTCCCTTGTTTGTTTTCCAGTaGGAGATTTTTGCCCATGTT +
Preference number: 2 (lower is better)
Translates to: CSLMCARVLVFPPSPGLPLFVFQ*EIFAHV
Trigger: AACATGGGCAAAAATCTCCCACTGGAAAACAAACAA...GGGAAGTCCAGGAGAGGGTGGAAAGACGAGAACTCTGGCACACATCAAAGAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593195.6
3UTR-3UTR CCA 90 bp ACGTTTCAGAGATGCAGGCATTTTCTGAAAGCTGTTCTTCAGGGTCACTCTGTAAGCTCCAGCGTTGTTTaGTCCAGTAGTGAGCTTCAC +
Preference number: 2 (lower is better)
Translates to: TFQRCRHFLKAVLQGHSVSSSVV*SSSELH
Trigger: GTGAAGCTCACTACTGGACCAAACAACGCTGGAGCT...TACAGAGTGACCCTGAAGAACAGCTTTCAGAAAATGCCTGCATCTCTGAAACGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CCA 90 bp ACGTTTCAGAGATGCAGGCATTTTCTGAAAGCTGTTCTTCAGGGTCACTCTGTATGTCTGTGCAGAAACTaGAAGGCCAGAAGTCCCACA +
Preference number: 2 (lower is better)
Translates to: TFQRCRHFLKAVLQGHSVCLCRN*KARSPT
Trigger: TGTGGGACTTCTGGCCTTCCAGTTTCTGCACAGACA...TACAGAGTGACCCTGAAGAACAGCTTTCAGAAAATGCCTGCATCTCTGAAACGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CCA 90 bp CTGATGACTTGGAAGTATGTGAGGTTTCTAACCGACTCTGTGTACTCCCTTGCTAGGCTCTGGAGAAGCTaGGCTTTTCATGCTTTTTGG +
Preference number: 2 (lower is better)
Translates to: LMTWKYVRFLTDSVYSLARLWRS*AFHAFW
Trigger: CCAAAAAGCATGAAAAGCCCAGCTTCTCCAGAGCCT...AGCAAGGGAGTACACAGAGTCGGTTAGAAACCTCACATACTTCCAAGTCATCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CCA 90 bp CTTTGTCTGCTCTTTGATGTGTGCCAGAGTTCTCGTCTTTCCACCCTCTCCTGGGTTCTTCATGAGAATTaGTTAGACTTTCAGCCTCCT +
Preference number: 2 (lower is better)
Translates to: LCLLFDVCQSSRLSTLSWVLHEN*LDFQPP
Trigger: AGGAGGCTGAAAGTCTAACCAATTCTCATGAAGAAC...CCAGGAGAGGGTGGAAAGACGAGAACTCTGGCACACATCAAAGAGCAGACAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CCA 90 bp TCTCTGAATCTCTACTTTCATTTCTTATCCCATCAGGTGACTTGGAGGGCTCTGGACAGATTCTTCTGCTaGGAGGTAAGGTTCTCTCCC +
Preference number: 2 (lower is better)
Translates to: SLNLYFHFLSHQVTWRALDRFFC*EVRFSP
Trigger: GGGAGAGAACCTTACCTCCCAGCAGAAGAATCTGTC...CAGAGCCCTCCAAGTCACCTGATGGGATAAGAAATGAAAGTAGAGATTCAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR CAA 90 bp GACAGATGTGCTAGTGGATGCTCGAGACTCAGGTTTGGAGACTGGTaGGCTCTTGATTATAAAAGGTGGCCCAATTTTGGAAAGCTGAAT +
Preference number: 2 (lower is better)
Translates to: DRCASGCSRLRFGDW*ALDYKRWPNFGKLN
Trigger: ATTCAGCTTTCCAAAATTGGGCCACCTTTTATAATCAAGAGCCAACCAGTCTCCAAACCTGAGTCTCGAGCATCCACTAGCACATCTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR TCA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACACCAGATTGCTGGGCATaGGTCCCATGCAATTTCAGA +
Preference number: 2 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTPDCWA*VPCNFR
Trigger: TCTGAAATTGCATGGGACTCATGCCCAGCAATCTGG...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR TCA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACAGGCTGTCCTCTGGTATaGGGGTGGCCAAAATATATG +
Preference number: 2 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTGCPLV*GWPKYM
Trigger: CATATATTTTGGCCACCCTCATACCAGAGGACAGCC...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR TCA 90 bp GACAGATGTGCTAGTGGATGCTCGAGACTCAGGTTTGGAGACTGGTTGGCTCTTTCAGGTATTGTCTTATaGTTTTCATCCTGGCATTCA +
Preference number: 2 (lower is better)
Translates to: DRCASGCSRLRFGDWLALSGIVL*FSSWHS
Trigger: TGAATGCCAGGATGAAAATCATAAGACAATACCTGA...AAGAGCCAACCAGTCTCCAAACCTGAGTCTCGAGCATCCACTAGCACATCTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR GCA 90 bp CCATCAGGTGACTTGGAGGGCTCTGATGACTTGGAAGTATGTGAGGTTTCTAACCTGTTTCCACCCTTGTaGTGCATATGCAAAGAATTC +
Preference number: 2 (lower is better)
Translates to: PSGDLEGSDDLEVCEVSNLFPPL*CICKEF
Trigger: GAATTCTTTGCATATGCAGCACAAGGGTGGAAACAG...GTTAGAAACCTCACATACTTCCAAGTCATCAGAGCCCTCCAAGTCACCTGATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CCA 90 bp CAGGTATGTTTTCATCAGAACTATGCACAGATAAGTCAGTGGCAGTTTCTGGAATCTCTCCCAGAGGTTTaGCAGTGGCGGAAGACTCAT +
Preference number: 2 (lower is better)
Translates to: QVCFHQNYAQISQWQFLESLPEV*QWRKTH
Trigger: ATGAGTCTTCCGCCACTGCCAAACCTCTGGGAGAGA...TTCCAGAAACTGCCACTGACTTATCTGTGCATAGTTCTGATGAAAACATACCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR CAA 90 bp CAGTTACCTGCTTCGAACAAACTCCATTTTCTTCTCCATGGGCATTaGCCTCGGCCATATCTGTACCATCCAATTCAGATTCACAGACTA +
Preference number: 2 (lower is better)
Translates to: QLPASNKLHFLLHGH*PRPYLYHPIQIHRL
Trigger: TAGTCTGTGAATCTGAATTGGATGGTACAGATATGGCCGAGGCAAATGCCCATGGAGAAGAAAATGGAGTTTGTTCGAAGCAGGTAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
3UTR CAA 90 bp TGTTTAAGAGCCTTTTTGGTGTGCTGCTGGAAGGAAGACACTAACTaGCTTTGCACTGCTGTGTTAGTAAGGCTTGAATCTCGAGTGGAA +
Preference number: 2 (lower is better)
Translates to: CLRAFLVCCWKEDTN*LCTAVLVRLESRVE
Trigger: TTCCACTCGAGATTCAAGCCTTACTAACACAGCAGTGCAAAGCAAGTTAGTGTCTTCCTTCCAGCAGCACACCAAAAAGGCTCTTAAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR TCA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTCCAGATTGCTGGGCATaGGTCCCATGCAATTTCAGA +
Preference number: 2 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPPDCWA*VPCNFR
Trigger: TCTGAAATTGCATGGGACTCATGCCCAGCAATCTGG...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR TCA 90 bp AAACTCCATTTTCTTCTCCATGGGCATTTGCCTCGGCCATATCTGTACCATCCAACTTTCCAGGGATTTTaGAGAATGTTCCATCCCCTA +
Preference number: 2 (lower is better)
Translates to: KLHFLLHGHLPRPYLYHPTFQGF*RMFHPL
Trigger: TAGGGGATGGAACATTCTTCAAAATCCCTGGAAAGT...TGGATGGTACAGATATGGCCGAGGCAAATGCCCATGGAGAAGAAAATGGAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR TCA 90 bp GATGACTTGGAAGTATGTGAGGTTTCTAACCGACTCTGTGTACTCCCTTGCTTACTCTACTGCAGTTTCTaGCTCCTTATGTTCTGTGTC +
Preference number: 2 (lower is better)
Translates to: DDLEVCEVSNRLCVLPCLLYCSF*LLMFCV
Trigger: GACACAGAACATAAGGAGTCAGAAACTGCAGTAGAG...TAAGCAAGGGAGTACACAGAGTCGGTTAGAAACCTCACATACTTCCAAGTCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR TCA 90 bp CGGAGGTGGGCAGACTTGTTGCTAGGAGATCTACAGTTTGGATTGACAATAATGATTTCTAGAGCCTTCTaGAAATGGAGCCTTATCCAC +
Preference number: 2 (lower is better)
Translates to: RRWADLLLGDLQFGLTIMISRAF*KWSLIH
Trigger: GTGGATAAGGCTCCATTTTCAGAAGGCTCTAGAAAT...CATTATTGTCAATCCAAACTGTAGATCTCCTAGCAACAAGTCTGCCCACCTCCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR GCA 90 bp GGCGAATCCGACTGCTCATCAGACACCTTTAATGGTGTCAAAACAACACGAGGAGCTTCATCAGTTACCTaGTTCGAACAAACTCCATTT +
Preference number: 2 (lower is better)
Translates to: GESDCSSDTFNGVKTTRGASSVT*FEQTPF
Trigger: AAATGGAGTTTGTTCGAAGCAGGTAACTGATGAAGC...TCCTCGTGTTGTTTTGACACCATTAAAGGTGTCTGATGAGCAGTCGGATTCGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CCA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTATTTGGCTTTTCCGTGTaGAAAAGGGATACTGCATCT +
Preference number: 2 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVFGFSV*KRDTAS
Trigger: AGATGCAGTATCCCTTTTCCACACGGAAAAGCCAAA...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR CCA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTAGTTGCTGATGCTATTTaGCTTTTCCGTGTGGAAAAG +
Preference number: 2 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVVADAI*LFRVEK
Trigger: CTTTTCCACACGGAAAAGCCAAATAGCATCAGCAAC...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR CCA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTTGGGCTTATGGCTATTaGCTGGCCAATTGCTCTCAT +
Preference number: 2 (lower is better)
Translates to: FKKIWPTSARSEARMNGCWAYGY*LANCSH
Trigger: ATGAGAGCAATTGGCCAGCCAATAGCCATAAGCCCA...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR CCA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACAAATCCTCTGGGCTTATaGCTATTGGCTGGCCAATTG +
Preference number: 2 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTNPLGL*LLAGQL
Trigger: CAATTGGCCAGCCAATAGCCATAAGCCCAGAGGATT...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR CCA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTACTACGGCTGTCCTCTaGTATGAGGGTGGCCAAAAT +
Preference number: 2 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPTTAVL*YEGGQN
Trigger: ATTTTGGCCACCCTCATACCAGAGGACAGCCGTAGT...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR CCA 90 bp ACAATGAAGGAACTGATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCACTACGGCTGTCCTCTaGTATGAGGGTGGCCAAAAT +
Preference number: 2 (lower is better)
Translates to: TMKELIMSSVSHQPQLYLTTAVL*YEGGQN
Trigger: ATTTTGGCCACCCTCATACCAGAGGACAGCCGTAGT...GAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTATCAGTTCCTTCATTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR CCA 90 bp ACAGGATTCCAAGTTATCTTCAGGAGGTGCTATTTGGGGTTCTTCATGAGAATTCTGCCTATCCACTTCTaGGAGCAAAAGCAGGAGGTA +
Preference number: 2 (lower is better)
Translates to: TGFQVIFRRCYLGFFMRILPIHF*EQKQEV
Trigger: TACCTCCTGCTTTTGCTCCCAGAAGTGGATAGGCAG...AATTCTCATGAAGAACCCCAAATAGCACCTCCTGAAGATAACTTGGAATCCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593195.6
3UTR-3UTR TCA 90 bp CTTGTTGCTAGGAGATCTACAGTTTGGATTGACAATAATGACACCAGTCGAACCGATTTACAGGTTTGCTaGCTCAGGGTCTTATTGTGC +
Preference number: 2 (lower is better)
Translates to: LVARRSTVWIDNNDTSRTDLQVC*LRVLLC
Trigger: GCACAATAAGACCCTGAGTCAGCAAACCTGTAAATC...GGTTCGACTGGTGTCATTATTGTCAATCCAAACTGTAGATCTCCTAGCAACAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR GCA 90 bp TGCATAACCACTTTAACTCATTCCTCTCATTCTCCTTACACATCTGCATTTCCGGCCATTCAGTTGGGATaGATCCTCCCCTTTATGAGA +
Preference number: 2 (lower is better)
Translates to: CITTLTHSSHSPYTSAFPAIQLG*ILPFMR
Trigger: TCTCATAAAGGGGAGGATGCATCCCAACTGAATGGC...CGGAAATGCAGATGTGTAAGGAGAATGAGAGGAATGAGTTAAAGTGGTTATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR GCA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACAACCTCACATACTGAGTaGAAAGGTTCTGTAGACTGG +
Preference number: 2 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTTSHTE*KGSVDW
Trigger: CCAGTCTACAGAACCTTTGCACTCAGTATGTGAGGT...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR GCA 90 bp AGGTATTGTCTTATGATTTTCATCCTGGCATTCACAGATACTAGTCTCTACCTCTTCTCCATGGGCATTTaGCTCGGCCATATCTGTACC +
Preference number: 2 (lower is better)
Translates to: RYCLMIFILAFTDTSLYLFSMGI*LGHICT
Trigger: GGTACAGATATGGCCGAGGCAAATGCCCATGGAGAA...GAGGTAGAGACTAGTATCTGTGAATGCCAGGATGAAAATCATAAGACAATACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR GCA 90 bp CTTGTTGCTAGGAGATCTACAGTTTGGATTGACAATAATGACACCAGTCGAACCTGCCTTATCCGCAACTaGATTTCTGGGGTAAACTCT +
Preference number: 2 (lower is better)
Translates to: LVARRSTVWIDNNDTSRTCLIRN*ISGVNS
Trigger: AGAGTTTACCCCAGAAATGCAGTTGCGGATAAGGCA...GGTTCGACTGGTGTCATTATTGTCAATCCAAACTGTAGATCTCCTAGCAACAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR GCA 90 bp CGGAGGTGGGCAGACTTGTTGCTAGGAGATCTACAGTTTGGATTGACAATAATGTCCTTCTCAATTTCTTaGCTTATCCGCAACTGCATT +
Preference number: 2 (lower is better)
Translates to: RRWADLLLGDLQFGLTIMSFSIS*LIRNCI
Trigger: AATGCAGTTGCGGATAAGGCAAGAAATTGAGAAGGA...CATTATTGTCAATCCAAACTGTAGATCTCCTAGCAACAAGTCTGCCCACCTCCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR GCA 90 bp GCAGTTTCTGGAAGTTTACTTGGGTTAAGAGACTGCTGTAGTACAGTGGTGGTCTCCTTCTCAATTTCTTaGCTTATCCGCAACTGCATT +
Preference number: 2 (lower is better)
Translates to: AVSGSLLGLRDCCSTVVVSFSIS*LIRNCI
Trigger: AATGCAGTTGCGGATAAGGCAAGAAATTGAGAAGGA...GACCACCACTGTACTACAGCAGTCTCTTAACCCAAGTAAACTTCCAGAAACTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CCA 90 bp ACAGGATTCCAAGTTATCTTCAGGAGGTGCTATTTGGGGTTCTTCATGAGAATTACAGAAACCAGGCTCTaGAGAAGCTGGGCTTTTCAT +
Preference number: 2 (lower is better)
Translates to: TGFQVIFRRCYLGFFMRITETRL*RSWAFH
Trigger: ATGAAAAGCCCAGCTTCTCCAGAGCCTGGTTTCTGT...AATTCTCATGAAGAACCCCAAATAGCACCTCCTGAAGATAACTTGGAATCCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CCA 90 bp ATTGACAATAATGACACCAGTCGAACCTTCCATTTTTGTTTCAGGGGTAGAAGATTTCTGCGGGGAGAGTaGCTCTTCAGATACAGAAGG +
Preference number: 2 (lower is better)
Translates to: IDNNDTSRTFHFCFRGRRFLRGE*LFRYRR
Trigger: CCTTCTGTATCTGAAGAGCCACTCTCCCCGCAGAAA...TCTTCTACCCCTGAAACAAAAATGGAAGGTTCGACTGGTGTCATTATTGTCAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CCA 90 bp ATTGACAATAATGACACCAGTCGAACCTTCCATTTTTGTTTCAGGGGTAGAAGACCAGAGGTTTGGCAGTaGCGGAAGACTCATCTTTCT +
Preference number: 2 (lower is better)
Translates to: IDNNDTSRTFHFCFRGRRPEVWQ*RKTHLS
Trigger: AGAAAGATGAGTCTTCCGCCACTGCCAAACCTCTGG...TCTTCTACCCCTGAAACAAAAATGGAAGGTTCGACTGGTGTCATTATTGTCAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR CAA 90 bp GATATCTCTGAATCTCTACTTTCATTTCTTATCCCATCAGGTGACTaGGAGGGCTCTGATGACTTGGAAGTATGTGAGGTTTCTAACCGA +
Preference number: 2 (lower is better)
Translates to: DISESLLSFLIPSGD*EGSDDLEVCEVSNR
Trigger: TCGGTTAGAAACCTCACATACTTCCAAGTCATCAGAGCCCTCCAAGTCACCTGATGGGATAAGAAATGAAAGTAGAGATTCAGAGATATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR TCA 90 bp ACAATGAAGGAACTGATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCTTCTGCCATAGTCTCTaGGAAAGTACAACAGGAGGA +
Preference number: 2 (lower is better)
Translates to: TMKELIMSSVSHQPQLYLFCHSL*ESTTGG
Trigger: TCCTCCTGTTGTACTTTCTCAGAGACTATGGCAGAA...GAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTATCAGTTCCTTCATTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR TCA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACAGGTCTGAAGCCAGAATaGATGGGTGTCATCAATAAA +
Preference number: 2 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTGLKPE*MGVINK
Trigger: TTTATTGATGACACCCATTCATTCTGGCTTCAGACC...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR TCA 90 bp TCACTCTGTAGCTCCATATCTATAGCAATTCCTTCATTTGGAAACTGGCCTTCTTGTGTTAGTAAGGCTTaGATCTCGAGTGGAAGATGC +
Preference number: 2 (lower is better)
Translates to: SLCSSISIAIPSFGNWPSCVSKA*ISSGRC
Trigger: GCATCTTCCACTCGAGATTCAAGCCTTACTAACACA...AGAAGGCCAGTTTCCAAATGAAGGAATTGCTATAGATATGGAGCTACAGAGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR TCA 90 bp TCTCTGAATCTCTACTTTCATTTCTTATCCCATCAGGTGACTTGGAGGGCTCTGGACATGAGTCATAGATaGAGTGGAAGGAATAAGAGA +
Preference number: 2 (lower is better)
Translates to: SLNLYFHFLSHQVTWRALDMSHR*SGRNKR
Trigger: TCTCTTATTCCTTCCACTTCATCTATGACTCATGTC...CAGAGCCCTCCAAGTCACCTGATGGGATAAGAAATGAAAGTAGAGATTCAGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR GCA 90 bp GAATATCCAAGGTCCAGCAGTCAACTAAACTTTCTATATAGCTCATCCCAGAAAATCCACTGGAACTTATaGTGCTTTCCTCGGGTAAGG +
Preference number: 2 (lower is better)
Translates to: EYPRSSSQLNFLYSSSQKIHWNL*CFPRVR
Trigger: CCTTACCCGAGGAAAGCAGCATAAGTTCCAGTGGAT...TTTCTGGGATGAGCTATATAGAAAGTTTAGTTGACTGCTGGACCTTGGATATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR GCA 90 bp CTGATGACTTGGAAGTATGTGAGGTTTCTAACCGACTCTGTGTACTCCCTTGCTCCAGTGGGAGATTTTTaGCCATGTTTCATTTCTTTA +
Preference number: 2 (lower is better)
Translates to: LMTWKYVRFLTDSVYSLAPVGDF*PCFISL
Trigger: TAAAGAAATGAAACATGGGCAAAAATCTCCCACTGG...AGCAAGGGAGTACACAGAGTCGGTTAGAAACCTCACATACTTCCAAGTCATCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593195.6
3UTR-3UTR CCA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACATTTGGCTTTTCCGTGTaGAAAAGGGATACTGCATCT +
Preference number: 2 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTFGFSV*KRDTAS
Trigger: AGATGCAGTATCCCTTTTCCACACGGAAAAGCCAAA...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR CCA 90 bp ACAATGAAGGAACTGATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCAGCTCTAAAATCCTCTaGGCTTATGGCTATTGGCTG +
Preference number: 2 (lower is better)
Translates to: TMKELIMSSVSHQPQLYLSSKIL*AYGYWL
Trigger: CAGCCAATAGCCATAAGCCCAGAGGATTTTAGAGCT...GAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTATCAGTTCCTTCATTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR CCA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTTGGTCATTCTTACCCTaGATACAGATGATTCCCCAC +
Preference number: 2 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPWSFLP*IQMIPH
Trigger: GTGGGGAATCATCTGTATCCAGGGTAAGAATGACCA...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR CCA 90 bp TGTCTTTATACACCTCAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATGAAGCACCAAAATCATaGCTACAGCAGCAGGCCTTT +
Preference number: 2 (lower is better)
Translates to: CLYTPQAYAYLIGGGLGNEAPKS*LQQQAF
Trigger: AAAGGCCTGCTGCTGTAGCCATGATTTTGGTGCTTC...ATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTGAGGTGTATAAAGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR CCA 90 bp AACAAAATGTTGTCTCAAGGGAGGCTGGAGTACATGATTCTTCTGATGTGGACTGGCTTGAATCTCGAGTaGAAGATGCTTCATCAGTTA +
Preference number: 2 (lower is better)
Translates to: NKMLSQGRLEYMILLMWTGLNLE*KMLHQL
Trigger: TAACTGATGAAGCATCTTCCACTCGAGATTCAAGCC...AGTCCACATCAGAAGAATCATGTACTCCAGCCTCCCTTGAGACAACATTTTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
3UTR CAA 90 bp TTAATGGTGTCAAAACAACACGAGGAACAGTCTTGTTTACCATCATaGAGACTCCATTTCTTCTTTTCTGCTGCTGCCTCAAAGCCTGTT +
Preference number: 2 (lower is better)
Translates to: LMVSKQHEEQSCLPS*RLHFFFSAAASKPV
Trigger: AACAGGCTTTGAGGCAGCAGCAGAAAAGAAGAAATGGAGTCTCAATGATGGTAAACAAGACTGTTCCTCGTGTTGTTTTGACACCATTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR TCA 90 bp ACAATGAAGGAACTGATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCTGGTATAGCAGTGAATaGATTTGGAAGGAGTTGGCA +
Preference number: 2 (lower is better)
Translates to: TMKELIMSSVSHQPQLYLWYSSE*IWKELA
Trigger: TGCCAACTCCTTCCAAATTCATTCACTGCTATACCA...GAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTATCAGTTCCTTCATTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR TCA 90 bp TATCTTCAGGAGGTGCTATTTGGGGTTCTTCATGAGAATTGGTTAGACTTTCAGACTTTCCAGGGATTTTaGAGAATGTTCCATCCCCTA +
Preference number: 2 (lower is better)
Translates to: YLQEVLFGVLHENWLDFQTFQGF*RMFHPL
Trigger: TAGGGGATGGAACATTCTTCAAAATCCCTGGAAAGT...CTGAAAGTCTAACCAATTCTCATGAAGAACCCCAAATAGCACCTCCTGAAGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR TCA 90 bp ATTGACAATAATGACACCAGTCGAACCTTCCATTTTTGTTTCAGGGGTAGAAGATGTGTTAGTAAGGCTTaGATCTCGAGTGGAAGATGC +
Preference number: 2 (lower is better)
Translates to: IDNNDTSRTFHFCFRGRRCVSKA*ISSGRC
Trigger: GCATCTTCCACTCGAGATTCAAGCCTTACTAACACA...TCTTCTACCCCTGAAACAAAAATGGAAGGTTCGACTGGTGTCATTATTGTCAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR TCA 90 bp TTTGCTGACTCAGGGTCTTATTGTGCAAATCTTCAGACGGAAATGCTTCAGGAGAATCGTTTTAAGTGCTaGCTTGTTTGTTTTCCAGTG +
Preference number: 2 (lower is better)
Translates to: FADSGSYCANLQTEMLQENRFKC*LVCFPV
Trigger: CACTGGAAAACAAACAAGTCAGCACTTAAAACGATT...CTCCTGAAGCATTTCCGTCTGAAGATTTGCACAATAAGACCCTGAGTCAGCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593195.6
3UTR-3UTR GCA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTTATTGGCTGGCCAATTaGTCTCATATTATCAGGTGT +
Preference number: 2 (lower is better)
Translates to: FKKIWPTSARSEARMNGCYWLAN*SHIIRC
Trigger: ACACCTGATAATATGAGAGCAATTGGCCAGCCAATA...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR GCA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACATGGAAGGAGTTGGCATaGAAGTGTCTATATTATAGG +
Preference number: 2 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTWKELA*KCLYYR
Trigger: CCTATAATATAGACACTTGCATGCCAACTCCTTCCA...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR GCA 90 bp GAATATCCAAGGTCCAGCAGTCAACTAAACTTTCTATATAGCTCATCCCAGAAACCCCTGCTCCAAAAGTaGTACTTAGGGAAATACATC +
Preference number: 2 (lower is better)
Translates to: EYPRSSSQLNFLYSSSQKPLLQK*YLGKYI
Trigger: GATGTATTTCCCTAAGTAGCACTTTTGGAGCAGGGG...TTTCTGGGATGAGCTATATAGAAAGTTTAGTTGACTGCTGGACCTTGGATATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR GCA 90 bp TGTCTTTATACACCTCAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATCCCCTGCTCCAAAAGTaGTACTTAGGGAAATACATC +
Preference number: 2 (lower is better)
Translates to: CLYTPQAYAYLIGGGLGNPLLQK*YLGKYI
Trigger: GATGTATTTCCCTAAGTAGCACTTTTGGAGCAGGGG...ATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTGAGGTGTATAAAGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR GCA 90 bp CAGGTATGTTTTCATCAGAACTATGCACAGATAAGTCAGTGGCAGTTTCTGGAACTTCTTTTCTGCTGCTaGCTCAAAGCCTGTTTAAGA +
Preference number: 2 (lower is better)
Translates to: QVCFHQNYAQISQWQFLELLFCC*LKACLR
Trigger: TCTTAAACAGGCTTTGAGGCAGCAGCAGAAAAGAAG...TTCCAGAAACTGCCACTGACTTATCTGTGCATAGTTCTGATGAAAACATACCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR GCA 90 bp GCAGTTTCTGGAAGTTTACTTGGGTTAAGAGACTGCTGTAGTACAGTGGTGGTCCTCTGTGTACTCCCTTaGTTATGTGTTTTATTTCTA +
Preference number: 2 (lower is better)
Translates to: AVSGSLLGLRDCCSTVVVLCVLP*LCVLFL
Trigger: TAGAAATAAAACACATAAGCAAGGGAGTACACAGAG...GACCACCACTGTACTACAGCAGTCTCTTAACCCAAGTAAACTTCCAGAAACTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CCA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTGTTGCTGATGCTATTTaGCTTTTCCGTGTGGAAAAG +
Preference number: 2 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPVADAI*LFRVEK
Trigger: CTTTTCCACACGGAAAAGCCAAATAGCATCAGCAAC...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR CCA 90 bp AATATATGGAATGTAGCTCAAATACTCAACACGCAGACTTTACTGGATGCACACAGCTCTAAAATCCTCTaGGCTTATGGCTATTGGCTG +
Preference number: 2 (lower is better)
Translates to: NIWNVAQILNTQTLLDAHSSKIL*AYGYWL
Trigger: CAGCCAATAGCCATAAGCCCAGAGGATTTTAGAGCT...GTGTGCATCCAGTAAAGTCTGCGTGTTGAGTATTTGAGCTACATTCCATATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR CCA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTGCCACAATCAATCAATaGGTTAATGGCACTCCACAT +
Preference number: 2 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPATINQ*VNGTPH
Trigger: ATGTGGAGTGCCATTAACCCATTGATTGATTGTGGC...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR CCA 90 bp TCACTCTGTAGCTCCATATCTATAGCAATTCCTTCATTTGGAAACTGGCCTTCTGGCTTGAATCTCGAGTaGAAGATGCTTCATCAGTTA +
Preference number: 2 (lower is better)
Translates to: SLCSSISIAIPSFGNWPSGLNLE*KMLHQL
Trigger: TAACTGATGAAGCATCTTCCACTCGAGATTCAAGCC...AGAAGGCCAGTTTCCAAATGAAGGAATTGCTATAGATATGGAGCTACAGAGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CCA 90 bp TATCTTCAGGAGGTGCTATTTGGGGTTCTTCATGAGAATTGGTTAGACTTTCAGTTTTTGGTGTGCTGCTaGAAGGAAGACACTAACTTG +
Preference number: 2 (lower is better)
Translates to: YLQEVLFGVLHENWLDFQFLVCC*KEDTNL
Trigger: CAAGTTAGTGTCTTCCTTCCAGCAGCACACCAAAAA...CTGAAAGTCTAACCAATTCTCATGAAGAACCCCAAATAGCACCTCCTGAAGATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR TCA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTTGTCAGTTACTGATGTaGTGGTTTTCAATTTGCTGG +
Preference number: 2 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPCQLLM*WFSICW
Trigger: CCAGCAAATTGAAAACCATCACATCAGTAACTGACA...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR GCA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTGCACATGCTAACATTTaGACACTACACCACAATAAC +
Preference number: 2 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPAHANI*TLHHNN
Trigger: GTTATTGTGGTGTAGTGTGCAAATGTTAGCATGTGC...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR GCA 90 bp GAATATCCAAGGTCCAGCAGTCAACTAAACTTTCTATATAGCTCATCCCAGAAATACACCTCAGGCATATaGATATCTTATAGGAGGAGG +
Preference number: 2 (lower is better)
Translates to: EYPRSSSQLNFLYSSSQKYTSGI*ISYRRR
Trigger: CCTCCTCCTATAAGATATGCATATGCCTGAGGTGTA...TTTCTGGGATGAGCTATATAGAAAGTTTAGTTGACTGCTGGACCTTGGATATTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR GCA 90 bp AGGTATTGTCTTATGATTTTCATCCTGGCATTCACAGATACTAGTCTCTACCTCATCTCGAGTGGAAGATaGTTCATCAGTTACCTGCTT +
Preference number: 2 (lower is better)
Translates to: RYCLMIFILAFTDTSLYLISSGR*FISYLL
Trigger: AAGCAGGTAACTGATGAAGCATCTTCCACTCGAGAT...GAGGTAGAGACTAGTATCTGTGAATGCCAGGATGAAAATCATAAGACAATACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR GCA 90 bp ACAGGATTCCAAGTTATCTTCAGGAGGTGCTATTTGGGGTTCTTCATGAGAATTATTCCTCTCTTGACATaGCCAGCTTTTCTCCATAAA +
Preference number: 2 (lower is better)
Translates to: TGFQVIFRRCYLGFFMRIIPLLT*PAFLHK
Trigger: TTTATGGAGAAAAGCTGGGCATGTCAAGAGAGGAAT...AATTCTCATGAAGAACCCCAAATAGCACCTCCTGAAGATAACTTGGAATCCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CCA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTCTTATGGCTATTGGCTaGCCAATTGCTCTCATATTA +
Preference number: 2 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPLMAIG*PIALIL
Trigger: TAATATGAGAGCAATTGGCCAGCCAATAGCCATAAG...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR CCA 90 bp TGTCTTTATACACCTCAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAAAGGTTCTGTAGACTaGAGTTTCTTCCGACACCAT +
Preference number: 2 (lower is better)
Translates to: CLYTPQAYAYLIGGGLGNKGSVD*SFFRHH
Trigger: ATGGTGTCGGAAGAAACTCCAGTCTACAGAACCTTT...ATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTGAGGTGTATAAAGACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR CCA 90 bp ATTGACAATAATGACACCAGTCGAACCTTCCATTTTTGTTTCAGGGGTAGAAGATTTTTGGTGTGCTGCTaGAAGGAAGACACTAACTTG +
Preference number: 2 (lower is better)
Translates to: IDNNDTSRTFHFCFRGRRFLVCC*KEDTNL
Trigger: CAAGTTAGTGTCTTCCTTCCAGCAGCACACCAAAAA...TCTTCTACCCCTGAAACAAAAATGGAAGGTTCGACTGGTGTCATTATTGTCAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
3UTR CAA 90 bp GAGCCTTCTGAAAATGGAGCCTTATCCACTGATGAGATATATTGCTaGTCCTGTAATTTAGCAGATGGAAGCTCATTTCCCTTATTATCT +
Preference number: 2 (lower is better)
Translates to: EPSENGALSTDEIYC*SCNLADGSSFPLLS
Trigger: AGATAATAAGGGAAATGAGCTTCCATCTGCTAAATTACAGGACAAGCAATATATCTCATCAGTGGATAAGGCTCCATTTTCAGAAGGCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR GCA 90 bp GAATATCCAAGGTCCAGCAGTCAACTAAACTTTCTATATAGCTCATCCCAGAAATATTGGCTGGCCAATTaGTCTCATATTATCAGGTGT +
Preference number: 2 (lower is better)
Translates to: EYPRSSSQLNFLYSSSQKYWLAN*SHIIRC
Trigger: ACACCTGATAATATGAGAGCAATTGGCCAGCCAATA...TTTCTGGGATGAGCTATATAGAAAGTTTAGTTGACTGCTGGACCTTGGATATTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR GCA 90 bp CTTGTTGCTAGGAGATCTACAGTTTGGATTGACAATAATGACACCAGTCGAACCCTCTGTGTACTCCCTTaGTTATGTGTTTTATTTCTA +
Preference number: 2 (lower is better)
Translates to: LVARRSTVWIDNNDTSRTLCVLP*LCVLFL
Trigger: TAGAAATAAAACACATAAGCAAGGGAGTACACAGAG...GGTTCGACTGGTGTCATTATTGTCAATCCAAACTGTAGATCTCCTAGCAACAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CCA 90 bp GAATATCCAAGGTCCAGCAGTCAACTAAACTTTCTATATAGCTCATCCCAGAAACTTATGGCTATTGGCTaGCCAATTGCTCTCATATTA +
Preference number: 2 (lower is better)
Translates to: EYPRSSSQLNFLYSSSQKLMAIG*PIALIL
Trigger: TAATATGAGAGCAATTGGCCAGCCAATAGCCATAAG...TTTCTGGGATGAGCTATATAGAAAGTTTAGTTGACTGCTGGACCTTGGATATTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR CCA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTGGTGGCCAAAATATATaGAATGTAGCTCAAATACTC +
Preference number: 2 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPGGQNI*NVAQIL
Trigger: GAGTATTTGAGCTACATTCCATATATTTTGGCCACC...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR CCA 90 bp GAATATCCAAGGTCCAGCAGTCAACTAAACTTTCTATATAGCTCATCCCAGAAAAAACTAAGGATCCACTaGAACTTATGCTGCTTTCCT +
Preference number: 2 (lower is better)
Translates to: EYPRSSSQLNFLYSSSQKKLRIH*NLCCFP
Trigger: AGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTT...TTTCTGGGATGAGCTATATAGAAAGTTTAGTTGACTGCTGGACCTTGGATATTC
39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR CCA 90 bp TGTCTTTATACACCTCAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAAACTAAGGATCCACTaGAACTTATGCTGCTTTCCT +
Preference number: 2 (lower is better)
Translates to: CLYTPQAYAYLIGGGLGNKLRIH*NLCCFP
Trigger: AGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTT...ATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTGAGGTGTATAAAGACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR CCA 90 bp ACAATGAAGGAACTGATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCTGGTTTTCAATTTGCTaGTGTAGACAGTATCTGACA +
Preference number: 2 (lower is better)
Translates to: TMKELIMSSVSHQPQLYLWFSIC*CRQYLT
Trigger: TGTCAGATACTGTCTACACCAGCAAATTGAAAACCA...GAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTATCAGTTCCTTCATTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR CAA 90 bp AAGGAAGCAAACGTATGTTTATTTATTAATGCCCTCAAGTTAGTGTaGACAAGAATAGATCCTGGGGTTTCTATGTCAATGTCCTCAGCT +
Preference number: 2 (lower is better)
Translates to: KEANVCLFINALKLV*TRIDPGVSMSMSSA
Trigger: AGCTGAGGACATTGACATAGAAACCCCAGGATCTATTCTTGTCAACACTAACTTGAGGGCATTAATAAATAAACATACGTTTGCTTCCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593195.6
3UTR-3UTR CCA 90 bp AATATATGGAATGTAGCTCAAATACTCAACACGCAGACTTTACTGGATGCACACACTTTTAAAAAGATATaGCCAACCTCTGCAAGGTCT +
Preference number: 2 (lower is better)
Translates to: NIWNVAQILNTQTLLDAHTFKKI*PTSARS
Trigger: AGACCTTGCAGAGGTTGGCCATATCTTTTTAAAAGT...GTGTGCATCCAGTAAAGTCTGCGTGTTGAGTATTTGAGCTACATTCCATATATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR CCA 90 bp TGTCTTTATACACCTCAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATTGGTTTTCAATTTGCTaGTGTAGACAGTATCTGACA +
Preference number: 2 (lower is better)
Translates to: CLYTPQAYAYLIGGGLGNWFSIC*CRQYLT
Trigger: TGTCAGATACTGTCTACACCAGCAAATTGAAAACCA...ATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTGAGGTGTATAAAGACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR CAA 90 bp TCAAAACATACAGAAGGACACTTTTTCTTATTCCCAATAAGCAACTaGCAGGCAGTATTCAACAATGAAGGAACTGATAATGAGCTCAGT +
Preference number: 2 (lower is better)
Translates to: SKHTEGHFFLFPISN*QAVFNNEGTDNELS
Trigger: ACTGAGCTCATTATCAGTTCCTTCATTGTTGAATACTGCCTGCAAGTTGCTTATTGGGAATAAGAAAAAGTGTCCTTCTGTATGTTTTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR GCA 90 bp ATATCCTCTGACTCCAATTCTGCCATTATATCTTTAGGTGGAATTTCTACCATATCCTTCTCAATTTCTTaGCTTATCCGCAACTGCATT +
Preference number: 2 (lower is better)
Translates to: ISSDSNSAIISLGGISTISFSIS*LIRNCI
Trigger: AATGCAGTTGCGGATAAGGCAAGAAATTGAGAAGGA...TATGGTAGAAATTCCACCTAAAGATATAATGGCAGAATTGGAGTCAGAGGATAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR CCA 72 bp GCAGCAGCCACAGCAGCAGCTGCAGCAGCCTCTCGCTaGGCCCGAGCTTGTTGGGCCCGGGCCTTGATATCT +
Preference number: 3 (lower is better)
Translates to: AAATAAAAAASR*ARACWARALIS
Trigger: AGATATCAAGGCCCGGGCCCAACAAGCTCGGGCCCAGCGAGAGGCTGCTGCAGCTGCTGCTGTGGCTGCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR GCA 72 bp CACCCTCTCCTGGACTTCCCATGGCTCCAGAGACAATaGTCGCTGCAGCAGCCACAGCAGCAGCTGCAGCAG +
Preference number: 3 (lower is better)
Translates to: HPLLDFPWLQRQ*SLQQPQQQLQQ
Trigger: CTGCTGCAGCTGCTGCTGTGGCTGCTGCAGCGAGCATTGTCTCTGGAGCCATGGGAAGTCCAGGAGAGGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CAA 90 bp CAATGCTCGCTGCAGCAGCCACAGCAGCAGCTGCAGCAGCCTCTCGCTGGGCCCGACCCTGTTTTTATTTaGGGGGTACTGGTCTCTACT +
Preference number: 3 (lower is better)
Translates to: QCSLQQPQQQLQQPLAGPDPVFI*GVLVST
Trigger: AGTAGAGACCAGTACCCCCAAAATAAAAACAGGGTC...GGGCCCAGCGAGAGGCTGCTGCAGCTGCTGCTGTGGCTGCTGCAGCGAGCATTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CAA 90 bp ACAATGCTCGCTGCAGCAGCCACAGCAGCAGCTGCAGCAGCCTCTCGCTGGGCCAAGCAAGTTCTGGAATaGAAGCAGGGTAGGGCTTCT +
Preference number: 3 (lower is better)
Translates to: TMLAAAATAAAAAASRWAKQVLE*KQGRAS
Trigger: AGAAGCCCTACCCTGCTTCAATTCCAGAACTTGCTT...GGCCCAGCGAGAGGCTGCTGCAGCTGCTGCTGTGGCTGCTGCAGCGAGCATTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CAA 90 bp GGAAGTTTACTTGGGTTAAGAGACTGCTGTAGTACAGTGGTGGTCTCCCGGAGGCTGGGCCCGAGCTTGTaGGGCCCGGGCCTTGATATC +
Preference number: 3 (lower is better)
Translates to: GSLLGLRDCCSTVVVSRRLGPSL*GPGLDI
Trigger: GATATCAAGGCCCGGGCCCAACAAGCTCGGGCCCAG...CCTCCGGGAGACCACCACTGTACTACAGCAGTCTCTTAACCCAAGTAAACTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR GCA 72 bp TCTCTGGGAACGCAGATGGACAGTGACTCTGGGCTCTaGATGCTCAGGGGGTCATTCCCACTAGGCAGCTAC +
Preference number: 3 (lower is better)
Translates to: SLGTQMDSDSGL*MLRGSFPLGSY
Trigger: GTAGCTGCCTAGTGGGAATGACCCCCTGAGCATGCAGAGCCCAGAGTCACTGTCCATCTGCGTTCCCAGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR CCA 72 bp CCCTCCTGGAGAAGGCAGGCTGGTACAGGCTCCCTCTaGGCTCTCAGAAGAAAAGGACGTTTCAGAGATGCA +
Preference number: 3 (lower is better)
Translates to: PSWRRQAGTGSL*ALRRKGRFRDA
Trigger: TGCATCTCTGAAACGTCCTTTTCTTCTGAGAGCCCAGAGGGAGCCTGTACCAGCCTGCCTTCTCCAGGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR CCA 72 bp ATGTGGACTGTGTTTCCCCTCCTGGAGAAGGCAGGCTaGTACAGGCTCCCTCTGGGCTCTCAGAAGAAAAGG +
Preference number: 3 (lower is better)
Translates to: MWTVFPLLEKAG*YRLPLGSQKKR
Trigger: CCTTTTCTTCTGAGAGCCCAGAGGGAGCCTGTACCAGCCTGCCTTCTCCAGGAGGGGAAACACAGTCCACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CAA 90 bp CCTTCCTTTGAGCTGAGCGGAGGAGGCAACCGGGTCTCTTTAGAGGTCTGGAAGCTTCTCCATGGGCATTaGCCTCGGCCATATCTGTAC +
Preference number: 3 (lower is better)
Translates to: PSFELSGGGNRVSLEVWKLLHGH*PRPYLY
Trigger: GTACAGATATGGCCGAGGCAAATGCCCATGGAGAAG...CTTCCAGACCTCTAAAGAGACCCGGTTGCCTCCTCCGCTCAGCTCAAAGGAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CAA 90 bp AGGGGGAACCCTTGGTTCCTCTCTGGGAGGCTGTTCTTTCTCAGGTGGGCTGCTCCTCAGAACAAAATGTaGTCTCAAGGGAGGCTGGAG +
Preference number: 3 (lower is better)
Translates to: RGNPWFLSGRLFFLRWAAPQNKM*SQGRLE
Trigger: CTCCAGCCTCCCTTGAGACAACATTTTGTTCTGAGG...AGCAGCCCACCTGAGAAAGAACAGCCTCCCAGAGAGGAACCAAGGGTTCCCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR GCA 72 bp CCCAGAGGTTTGGCAGTGGCGGAAGACTCATCTTTCTaGGGGGAGAGTGGCTCTTCAGATACAGAAGGTGAC +
Preference number: 3 (lower is better)
Translates to: PRGLAVAEDSSF*GESGSSDTEGD
Trigger: GTCACCTTCTGTATCTGAAGAGCCACTCTCCCCGCAGAAAGATGAGTCTTCCGCCACTGCCAAACCTCTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CAA 90 bp AGGGGGAACCCTTGGTTCCTCTCTGGGAGGCTGTTCTTTCTCAGGTGGGCTGCTTCGCTGTTTCCACCCTaGTGCTGCATATGCAAAGAA +
Preference number: 3 (lower is better)
Translates to: RGNPWFLSGRLFFLRWAASLFPP*CCICKE
Trigger: TTCTTTGCATATGCAGCACAAGGGTGGAAACAGCGA...AGCAGCCCACCTGAGAAAGAACAGCCTCCCAGAGAGGAACCAAGGGTTCCCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR GCA 72 bp TGTGTTCCTCCCGCCACTGACAGATGTGCTAGTGGATaGTCGAGACTCAGGTTTGGAGACTGGTTGGCTCTT +
Preference number: 3 (lower is better)
Translates to: CVPPATDRCASG*SRLRFGDWLAL
Trigger: AAGAGCCAACCAGTCTCCAAACCTGAGTCTCGAGCATCCACTAGCACATCTGTCAGTGGCGGGAGGAACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CAA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTGTTGACGCTTTAGCCTaGGGTAGTCCCTTTTATCAT +
Preference number: 3 (lower is better)
Translates to: CAGPHHRTDDATLGLASAVDALA*GSPFYH
Trigger: ATGATAAAAGGGACTACCCAAGGCTAAAGCGTCAAC...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR CAA 90 bp GCCAGAGTTCTCGTCTTTCCACCCTCTCCTGGACTTCCCATGGCTCCAGAGACAGAGGGCTCTGATGACTaGGAAGTATGTGAGGTTTCT +
Preference number: 3 (lower is better)
Translates to: ARVLVFPPSPGLPMAPETEGSDD*EVCEVS
Trigger: AGAAACCTCACATACTTCCAAGTCATCAGAGCCCTC...TGTCTCTGGAGCCATGGGAAGTCCAGGAGAGGGTGGAAAGACGAGAACTCTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR TCA 72 bp GACAGGCTAATGGAGAGGTTCCATTTCCGGAAGGAATaGACGGAACCACTCCAATGCAATCCCAGCCACTCC +
Preference number: 3 (lower is better)
Translates to: DRLMERFHFRKE*TEPLQCNPSHS
Trigger: GGAGTGGCTGGGATTGCATTGGAGTGGTTCCGTTCATTCCTTCCGGAAATGGAACCTCTCCATTAGCCTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
3UTR GCA 72 bp GTGGCAGTTTCTGGAAGTTTACTTGGGTTAAGAGACTaGTGTAGTACAGTGGTGGTCTCCCGGAGGTGGGCA +
Preference number: 3 (lower is better)
Translates to: VAVSGSLLGLRD*CSTVVVSRRWA
Trigger: TGCCCACCTCCGGGAGACCACCACTGTACTACAGCAGTCTCTTAACCCAAGTAAACTTCCAGAAACTGCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR CCA 72 bp AGAGACTGCTGTAGTACAGTGGTGGTCTCCCGGAGGTaGGCAGACTTGTTGCTAGGAGATCTACAGTTTGGA +
Preference number: 3 (lower is better)
Translates to: RDCCSTVVVSRR*ADLLLGDLQFG
Trigger: TCCAAACTGTAGATCTCCTAGCAACAAGTCTGCCCACCTCCGGGAGACCACCACTGTACTACAGCAGTCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CAA 90 bp GTTCCTCCCGCCACTGACAGATGTGCTAGTGGATGCTCGAGACTCAGGTTTGGATCGCTGTTTCCACCCTaGTGCTGCATATGCAAAGAA +
Preference number: 3 (lower is better)
Translates to: VPPATDRCASGCSRLRFGSLFPP*CCICKE
Trigger: TTCTTTGCATATGCAGCACAAGGGTGGAAACAGCGA...TCCAAACCTGAGTCTCGAGCATCCACTAGCACATCTGTCAGTGGCGGGAGGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CAA 90 bp CTCCTGGACTTCCCATGGCTCCAGAGACAATGCTCGCTGCAGCAGCCACAGCAGCAGGTGAAGTGGATATaGGAGATATTTCTGACATCA +
Preference number: 3 (lower is better)
Translates to: LLDFPWLQRQCSLQQPQQQVKWI*EIFLTS
Trigger: TGATGTCAGAAATATCTCCAATATCCACTTCACCTG...CTGCTGTGGCTGCTGCAGCGAGCATTGTCTCTGGAGCCATGGGAAGTCCAGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CAA 90 bp CTTGTTGCTAGGAGATCTACAGTTTGGATTGACAATAATGACACCAGTCGAACCCTGGGCCCGAGCTTGTaGGGCCCGGGCCTTGATATC +
Preference number: 3 (lower is better)
Translates to: LVARRSTVWIDNNDTSRTLGPSL*GPGLDI
Trigger: GATATCAAGGCCCGGGCCCAACAAGCTCGGGCCCAG...GGTTCGACTGGTGTCATTATTGTCAATCCAAACTGTAGATCTCCTAGCAACAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CAA 90 bp GGAAGTTTACTTGGGTTAAGAGACTGCTGTAGTACAGTGGTGGTCTCCCGGAGGCATGCTTTTTGGCTGTaGTTCTGCCAAGGCTGTCTG +
Preference number: 3 (lower is better)
Translates to: GSLLGLRDCCSTVVVSRRHAFWL*FCQGCL
Trigger: CAGACAGCCTTGGCAGAACAACAGCCAAAAAGCATG...CCTCCGGGAGACCACCACTGTACTACAGCAGTCTCTTAACCCAAGTAAACTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR CCA 72 bp GATGCTACCCTAGGCTTGGCTTCAGCTTCTAAAACCTaGGACTTCATTACACCACGGAGGAACTGGGAAACC +
Preference number: 3 (lower is better)
Translates to: DATLGLASASKT*DFITPRRNWET
Trigger: GGTTTCCCAGTTCCTCCGTGGTGTAATGAAGTCCCAGGTTTTAGAAGCTGAAGCCAAGCCTAGGGTAGCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR CAA 90 bp GGCTGGTACAGGCTCCCTCTGGGCTCTCAGAAGAAAAGGACGTTTCAGAGATGCAAGGAAGACACTAACTaGCTTTGCACTGCTGTGTTA +
Preference number: 3 (lower is better)
Translates to: GWYRLPLGSQKKRTFQRCKEDTN*LCTAVL
Trigger: TAACACAGCAGTGCAAAGCAAGTTAGTGTCTTCCTT...GCATCTCTGAAACGTCCTTTTCTTCTGAGAGCCCAGAGGGAGCCTGTACCAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CAA 90 bp GACAGATGTGCTAGTGGATGCTCGAGACTCAGGTTTGGAGACTGGTTGGCTCTTGCCCTCAAGTTAGTGTaGACAAGAATAGATCCTGGG +
Preference number: 3 (lower is better)
Translates to: DRCASGCSRLRFGDWLALALKLV*TRIDPG
Trigger: CCCAGGATCTATTCTTGTCAACACTAACTTGAGGGC...AAGAGCCAACCAGTCTCCAAACCTGAGTCTCGAGCATCCACTAGCACATCTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593195.6
3UTR-3UTR CAA 90 bp GGCTGGTACAGGCTCCCTCTGGGCTCTCAGAAGAAAAGGACGTTTCAGAGATGCTTCCTTCTCAATTTCTaGCCTTATCCGCAACTGCAT +
Preference number: 3 (lower is better)
Translates to: GWYRLPLGSQKKRTFQRCFLLNF*PYPQLH
Trigger: ATGCAGTTGCGGATAAGGCAAGAAATTGAGAAGGAA...GCATCTCTGAAACGTCCTTTTCTTCTGAGAGCCCAGAGGGAGCCTGTACCAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CAA 90 bp CTGATGACTTGGAAGTATGTGAGGTTTCTAACCGACTCTGTGTACTCCCTTGCTTTCTCTCCCAGAGGTTaGGCAGTGGCGGAAGACTCA +
Preference number: 3 (lower is better)
Translates to: LMTWKYVRFLTDSVYSLAFSPRG*AVAEDS
Trigger: TGAGTCTTCCGCCACTGCCAAACCTCTGGGAGAGAA...AGCAAGGGAGTACACAGAGTCGGTTAGAAACCTCACATACTTCCAAGTCATCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR TCA 72 bp ACTGGAAGGCCAGAAGTCCCACATGAAGAACTACTTTaGGCTCCAGCGTTGTTTGGTCCAGTAGTGAGCTTC +
Preference number: 3 (lower is better)
Translates to: TGRPEVPHEELL*APALFGPVVSF
Trigger: GAAGCTCACTACTGGACCAAACAACGCTGGAGCTCAAAGTAGTTCTTCATGTGGGACTTCTGGCCTTCCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR TCA 72 bp TGTCTGTGCAGAAACTGGAAGGCCAGAAGTCCCACATaGAGAACTACTTTGAGCTCCAGCGTTGTTTGGTCC +
Preference number: 3 (lower is better)
Translates to: CLCRNWKARSPT*RTTLSSSVVWS
Trigger: GGACCAAACAACGCTGGAGCTCAAAGTAGTTCTTCATGTGGGACTTCTGGCCTTCCAGTTTCTGCACAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR CCA 72 bp ACCTGGCAGGCAGTGAAGAGAAAACTAAGGATCCACTaGAACTTATGCTGCTTTCCTCGGGTAAGGCTGGTT +
Preference number: 3 (lower is better)
Translates to: TWQAVKRKLRIH*NLCCFPRVRLV
Trigger: AACCAGCCTTACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGCCTGCCAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR CCA 72 bp AGAGTTCCTGTTCTAGGACTCTTCACAATTGTTCTCTaGGAACGCAGATGGACAGTGACTCTGGGCTCTGCA +
Preference number: 3 (lower is better)
Translates to: RVPVLGLFTIVL*ERRWTVTLGSA
Trigger: TGCAGAGCCCAGAGTCACTGTCCATCTGCGTTCCCAGAGAACAATTGTGAAGAGTCCTAGAACAGGAACTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR CCA 72 bp ATGATGGGTTCGGGAGTATTAGACAGATTCTTCTGCTaGGAGGTAAGGTTCTCTCCCAGAGGTTTGGCAGTG +
Preference number: 3 (lower is better)
Translates to: MMGSGVLDRFFC*EVRFSPRGLAV
Trigger: CACTGCCAAACCTCTGGGAGAGAACCTTACCTCCCAGCAGAAGAATCTGTCTAATACTCCCGAACCCATCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CAA 90 bp GATGACTTGGAAGTATGTGAGGTTTCTAACCGACTCTGTGTACTCCCTTGCTTATTCTCTCCCAGAGGTTaGGCAGTGGCGGAAGACTCA +
Preference number: 3 (lower is better)
Translates to: DDLEVCEVSNRLCVLPCLFSPRG*AVAEDS
Trigger: TGAGTCTTCCGCCACTGCCAAACCTCTGGGAGAGAA...TAAGCAAGGGAGTACACAGAGTCGGTTAGAAACCTCACATACTTCCAAGTCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CAA 90 bp GCAGTTTCTGGAAGTTTACTTGGGTTAAGAGACTGCTGTAGTACAGTGGTGGTCATCCCATCAGGTGACTaGGAGGGCTCTGATGACTTG +
Preference number: 3 (lower is better)
Translates to: AVSGSLLGLRDCCSTVVVIPSGD*EGSDDL
Trigger: CAAGTCATCAGAGCCCTCCAAGTCACCTGATGGGAT...GACCACCACTGTACTACAGCAGTCTCTTAACCCAAGTAAACTTCCAGAAACTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR CCA 72 bp TACCATAGGGCAAAGAGTAGCACAGAAACCAGGCTCTaGAGAAGCTGGGCTTTTCATGCTTTTTGGCTGTTG +
Preference number: 3 (lower is better)
Translates to: YHRAKSSTETRL*RSWAFHAFWLL
Trigger: CAACAGCCAAAAAGCATGAAAAGCCCAGCTTCTCCAGAGCCTGGTTTCTGTGCTACTCTTTGCCCTATGGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CAA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACAAGGCCTAGAACCAGATaGCTGGGCATGAGTCCCATG +
Preference number: 3 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTRPRTR*LGMSPM
Trigger: CATGGGACTCATGCCCAGCAATCTGGTTCTAGGCCT...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR CAA 90 bp TCTTTAGGTGGAATTTCTACCATAGGGCAAAGAGTAGCACAGAAACCAGGCTCTCTTCTCCATGGGCATTaGCCTCGGCCATATCTGTAC +
Preference number: 3 (lower is better)
Translates to: SLGGISTIGQRVAQKPGSLLHGH*PRPYLY
Trigger: GTACAGATATGGCCGAGGCAAATGCCCATGGAGAAG...AGAGCCTGGTTTCTGTGCTACTCTTTGCCCTATGGTAGAAATTCCACCTAAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CAA 90 bp CGGAGGTGGGCAGACTTGTTGCTAGGAGATCTACAGTTTGGATTGACAATAATGGCCTTTGTCTGCTCTTaGATGTGTGCCAGAGTTCTC +
Preference number: 3 (lower is better)
Translates to: RRWADLLLGDLQFGLTIMAFVCS*MCARVL
Trigger: GAGAACTCTGGCACACATCAAAGAGCAGACAAAGGC...CATTATTGTCAATCCAAACTGTAGATCTCCTAGCAACAAGTCTGCCCACCTCCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CAA 90 bp ACAATGAAGGAACTGATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCAGGCCTAGAACCAGATaGCTGGGCATGAGTCCCATG +
Preference number: 3 (lower is better)
Translates to: TMKELIMSSVSHQPQLYLRPRTR*LGMSPM
Trigger: CATGGGACTCATGCCCAGCAATCTGGTTCTAGGCCT...GAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTATCAGTTCCTTCATTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR CAA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTCTGGGCTTATGGCTATaGGCTGGCCAATTGCTCTCA +
Preference number: 3 (lower is better)
Translates to: FKKIWPTSARSEARMNGCLGLWL*AGQLLS
Trigger: TGAGAGCAATTGGCCAGCCAATAGCCATAAGCCCAG...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR CAA 90 bp GGCGAATCCGACTGCTCATCAGACACCTTTAATGGTGTCAAAACAACACGAGGAGACTTTCCAGGGATTTaGAAGAATGTTCCATCCCCT +
Preference number: 3 (lower is better)
Translates to: GESDCSSDTFNGVKTTRGDFPGI*KNVPSP
Trigger: AGGGGATGGAACATTCTTCAAAATCCCTGGAAAGTC...TCCTCGTGTTGTTTTGACACCATTAAAGGTGTCTGATGAGCAGTCGGATTCGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CAA 90 bp TATGATGGGTTCGGGAGTATTAGACAGATTCTTCTGCTGGGAGGTAAGGTTCTCGGCTTTTCATGCTTTTaGGCTGTTGTTCTGCCAAGG +
Preference number: 3 (lower is better)
Translates to: YDGFGSIRQILLLGGKVLGFSCF*AVVLPR
Trigger: CCTTGGCAGAACAACAGCCAAAAAGCATGAAAAGCC...GAGAACCTTACCTCCCAGCAGAAGAATCTGTCTAATACTCCCGAACCCATCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CAA 90 bp TACAGTGGTGGTCTCCCGGAGGTGGGCAGACTTGTTGCTAGGAGATCTACAGTTGATGTTAATGGTAAGTaGGACATAAGAGATGCTTCT +
Preference number: 3 (lower is better)
Translates to: YSGGLPEVGRLVARRSTVDVNGK*DIRDAS
Trigger: AGAAGCATCTCTTATGTCCAACTTACCATTAACATC...AACTGTAGATCTCCTAGCAACAAGTCTGCCCACCTCCGGGAGACCACCACTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CAA 90 bp CTTTGTCTGCTCTTTGATGTGTGCCAGAGTTCTCGTCTTTCCACCCTCTCCTGGGATGTTAAAGGTAAGTaGGATACTGGTGATGCTTCA +
Preference number: 3 (lower is better)
Translates to: LCLLFDVCQSSRLSTLSWDVKGK*DTGDAS
Trigger: TGAAGCATCACCAGTATCCAACTTACCTTTAACATC...CCAGGAGAGGGTGGAAAGACGAGAACTCTGGCACACATCAAAGAGCAGACAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CAA 90 bp GCTAGTGGATGCTCGAGACTCAGGTTTGGAGACTGGTTGGCTCTTGATTATAAAGAGGGCTCTGATGACTaGGAAGTATGTGAGGTTTCT +
Preference number: 3 (lower is better)
Translates to: ASGCSRLRFGDWLALDYKEGSDD*EVCEVS
Trigger: AGAAACCTCACATACTTCCAAGTCATCAGAGCCCTC...TTTATAATCAAGAGCCAACCAGTCTCCAAACCTGAGTCTCGAGCATCCACTAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CAA 90 bp GCAGTTTCTGGAAGTTTACTTGGGTTAAGAGACTGCTGTAGTACAGTGGTGGTCGAGACTGGTTGGCTCTaGATTATAAAAGGTGGCCCA +
Preference number: 3 (lower is better)
Translates to: AVSGSLLGLRDCCSTVVVETGWL*IIKGGP
Trigger: TGGGCCACCTTTTATAATCAAGAGCCAACCAGTCTC...GACCACCACTGTACTACAGCAGTCTCTTAACCCAAGTAAACTTCCAGAAACTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR GCA 72 bp TTGGTGTGCTGCTGGAAGGAAGACACTAACTTGCTTTaGACTGCTGTGTTAGTAAGGCTTGAATCTCGAGTG +
Preference number: 3 (lower is better)
Translates to: LVCCWKEDTNLL*TAVLVRLESRV
Trigger: CACTCGAGATTCAAGCCTTACTAACACAGCAGTGCAAAGCAAGTTAGTGTCTTCCTTCCAGCAGCACACCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
3UTR GCA 72 bp TGCTGCCTCAAAGCCTGTTTAAGAGCCTTTTTGGTGTaGTGCTGGAAGGAAGACACTAACTTGCTTTGCACT +
Preference number: 3 (lower is better)
Translates to: CCLKACLRAFLV*CWKEDTNLLCT
Trigger: AGTGCAAAGCAAGTTAGTGTCTTCCTTCCAGCAGCACACCAAAAAGGCTCTTAAACAGGCTTTGAGGCAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
3UTR CCA 72 bp CTCAAAGCCTGTTTAAGAGCCTTTTTGGTGTGCTGCTaGAAGGAAGACACTAACTTGCTTTGCACTGCTGTG +
Preference number: 3 (lower is better)
Translates to: LKACLRAFLVCC*KEDTNLLCTAV
Trigger: CACAGCAGTGCAAAGCAAGTTAGTGTCTTCCTTCCAGCAGCACACCAAAAAGGCTCTTAAACAGGCTTTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CAA 90 bp ACAATGAAGGAACTGATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCCTGGGCTTATGGCTATaGGCTGGCCAATTGCTCTCA +
Preference number: 3 (lower is better)
Translates to: TMKELIMSSVSHQPQLYLLGLWL*AGQLLS
Trigger: TGAGAGCAATTGGCCAGCCAATAGCCATAAGCCCAG...GAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTATCAGTTCCTTCATTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR CAA 90 bp GCTAGTGGATGCTCGAGACTCAGGTTTGGAGACTGGTTGGCTCTTGATTATAAAGACTTTCCAGGGATTTaGAAGAATGTTCCATCCCCT +
Preference number: 3 (lower is better)
Translates to: ASGCSRLRFGDWLALDYKDFPGI*KNVPSP
Trigger: AGGGGATGGAACATTCTTCAAAATCCCTGGAAAGTC...TTTATAATCAAGAGCCAACCAGTCTCCAAACCTGAGTCTCGAGCATCCACTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
3UTR GCA 72 bp GTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTaGTTTCCTCGGGTAAGGCTGGTTAAGTGCATTGCT +
Preference number: 3 (lower is better)
Translates to: VKRKLRIHWNLC*FPRVRLVKCIA
Trigger: AGCAATGCACTTAACCAGCCTTACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR GCA 72 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATaGTGCTTTCCTCGGGTAAGGCTGGTTAAGTGCATT +
Preference number: 3 (lower is better)
Translates to: AVKRKLRIHWNL*CFPRVRLVKCI
Trigger: AATGCACTTAACCAGCCTTACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR CCA 72 bp GAAGCTCTAAAATCCTCTGGGCTTATGGCTATTGGCTaGCCAATTGCTCTCATATTATCAGGTGTCAAAGGC +
Preference number: 3 (lower is better)
Translates to: EALKSSGLMAIG*PIALILSGVKG
Trigger: GCCTTTGACACCTGATAATATGAGAGCAATTGGCCAGCCAATAGCCATAAGCCCAGAGGATTTTAGAGCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR CCA 72 bp GTTACCTGCTTCGAACAAACTCCATTTTCTTCTCCATaGGCATTTGCCTCGGCCATATCTGTACCATCCAAT +
Preference number: 3 (lower is better)
Translates to: VTCFEQTPFSSP*AFASAISVPSN
Trigger: ATTGGATGGTACAGATATGGCCGAGGCAAATGCCCATGGAGAAGAAAATGGAGTTTGTTCGAAGCAGGTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
3UTR CCA 72 bp TGTGCTAGTGGATGCTCGAGACTCAGGTTTGGAGACTaGTTGGCTCTTGATTATAAAAGGTGGCCCAATTTT +
Preference number: 3 (lower is better)
Translates to: CASGCSRLRFGD*LALDYKRWPNF
Trigger: AAAATTGGGCCACCTTTTATAATCAAGAGCCAACCAGTCTCCAAACCTGAGTCTCGAGCATCCACTAGCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CAA 90 bp CTTGTTGCTAGGAGATCTACAGTTTGGATTGACAATAATGACACCAGTCGAACCAAGCAAGTTCTGGAATaGAAGCAGGGTAGGGCTTCT +
Preference number: 3 (lower is better)
Translates to: LVARRSTVWIDNNDTSRTKQVLE*KQGRAS
Trigger: AGAAGCCCTACCCTGCTTCAATTCCAGAACTTGCTT...GGTTCGACTGGTGTCATTATTGTCAATCCAAACTGTAGATCTCCTAGCAACAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR TCA 72 bp TCAGTATCTCATCAGCCTCAATTGTACCTCACATACTaGGTGCAAAGGTTCTGTAGACTGGAGTTTCTTCCG +
Preference number: 3 (lower is better)
Translates to: SVSHQPQLYLTY*VQRFCRLEFLP
Trigger: CGGAAGAAACTCCAGTCTACAGAACCTTTGCACTCAGTATGTGAGGTACAATTGAGGCTGATGAGATACTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR TCA 72 bp GTTTGGTCCAGTAGTGAGCTTCACAGATTCCTCTCTTaGCATGCCCAGCTTTTCTCCATAAAACCTCTCAAA +
Preference number: 3 (lower is better)
Translates to: VWSSSELHRFLS*HAQLFSIKPLK
Trigger: TTTGAGAGGTTTTATGGAGAAAAGCTGGGCATGTCAAGAGAGGAATCTGTGAAGCTCACTACTGGACCAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR GCA 72 bp TATCTCATCAGCCTCAATTGTACCTCACATACTGAGTaGAAAGGTTCTGTAGACTGGAGTTTCTTCCGACAC +
Preference number: 3 (lower is better)
Translates to: YLISLNCTSHTE*KGSVDWSFFRH
Trigger: GTGTCGGAAGAAACTCCAGTCTACAGAACCTTTGCACTCAGTATGTGAGGTACAATTGAGGCTGATGAGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR GCA 72 bp CTTCGAACAAACTCCATTTTCTTCTCCATGGGCATTTaGCTCGGCCATATCTGTACCATCCAATTCAGATTC +
Preference number: 3 (lower is better)
Translates to: LRTNSIFFSMGI*LGHICTIQFRF
Trigger: GAATCTGAATTGGATGGTACAGATATGGCCGAGGCAAATGCCCATGGAGAAGAAAATGGAGTTTGTTCGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
3UTR GCA 72 bp CTTGAATCTCGAGTGGAAGATGCTTCATCAGTTACCTaGTTCGAACAAACTCCATTTTCTTCTCCATGGGCA +
Preference number: 3 (lower is better)
Translates to: LESRVEDASSVT*FEQTPFSSPWA
Trigger: TGCCCATGGAGAAGAAAATGGAGTTTGTTCGAAGCAGGTAACTGATGAAGCATCTTCCACTCGAGATTCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CAA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACACTATTGGCTGGCCAATaGCTCTCATATTATCAGGTG +
Preference number: 3 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTLLAGQ*LSYYQV
Trigger: CACCTGATAATATGAGAGCAATTGGCCAGCCAATAG...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR CAA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTACTTTTGAACTTGCTTTaGAAAACAGAGCCTCCTGAA +
Preference number: 3 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVLLNLL*KTEPPE
Trigger: TTCAGGAGGCTCTGTTTTCAAAAGCAAGTTCAAAAG...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR CAA 90 bp GCTAGTGGATGCTCGAGACTCAGGTTTGGAGACTGGTTGGCTCTTGATTATAAACAGGTGAAGTGGATATaGGAGATATTTCTGACATCA +
Preference number: 3 (lower is better)
Translates to: ASGCSRLRFGDWLALDYKQVKWI*EIFLTS
Trigger: TGATGTCAGAAATATCTCCAATATCCACTTCACCTG...TTTATAATCAAGAGCCAACCAGTCTCCAAACCTGAGTCTCGAGCATCCACTAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR TCA 72 bp CTGGAGTTTCTTCCGACACCATGTCAGTTACTGATGTaGTGGTTTTCAATTTGCTGGTGTAGACAGTATCTG +
Preference number: 3 (lower is better)
Translates to: LEFLPTPCQLLM*WFSICWCRQYL
Trigger: CAGATACTGTCTACACCAGCAAATTGAAAACCATCACATCAGTAACTGACATGGTGTCGGAAGAAACTCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR TCA 72 bp GTAGACTGGAGTTTCTTCCGACACCATGTCAGTTACTaGTGTGATGGTTTTCAATTTGCTGGTGTAGACAGT +
Preference number: 3 (lower is better)
Translates to: VDWSFFRHHVSY*CDGFQFAGVDS
Trigger: ACTGTCTACACCAGCAAATTGAAAACCATCACATCAGTAACTGACATGGTGTCGGAAGAAACTCCAGTCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR TCA 72 bp TTGAAGAATGTTCCATCCCCTATTCGAGTGTTAGTGTaGAGCATTGCATTCAGACAGGCTAATGGAGAGGTT +
Preference number: 3 (lower is better)
Translates to: LKNVPSPIRVLV*SIAFRQANGEV
Trigger: AACCTCTCCATTAGCCTGTCTGAATGCAATGCTTCACACTAACACTCGAATAGGGGATGGAACATTCTTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
3UTR GCA 72 bp AAATTCCATCACTTCCCATCTGAAGGCGAATCCGACTaGTCATCAGACACCTTTAATGGTGTCAAAACAACA +
Preference number: 3 (lower is better)
Translates to: KFHHFPSEGESD*SSDTFNGVKTT
Trigger: TGTTGTTTTGACACCATTAAAGGTGTCTGATGAGCAGTCGGATTCGCCTTCAGATGGGAAGTGATGGAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592541.6
3UTR CCA 72 bp CTTCAGGAGGTGCTATTTGGGGTTCTTCATGAGAATTaGTTAGACTTTCAGCCTCCTCAGAAAATTCAGGTA +
Preference number: 3 (lower is better)
Translates to: LQEVLFGVLHEN*LDFQPPQKIQV
Trigger: TACCTGAATTTTCTGAGGAGGCTGAAAGTCTAACCAATTCTCATGAAGAACCCCAAATAGCACCTCCTGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CAA 90 bp CGGAGGTGGGCAGACTTGTTGCTAGGAGATCTACAGTTTGGATTGACAATAATGGATGTTAATGGTAAGTaGGACATAAGAGATGCTTCT +
Preference number: 3 (lower is better)
Translates to: RRWADLLLGDLQFGLTIMDVNGK*DIRDAS
Trigger: AGAAGCATCTCTTATGTCCAACTTACCATTAACATC...CATTATTGTCAATCCAAACTGTAGATCTCCTAGCAACAAGTCTGCCCACCTCCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR GCA 72 bp CCATTTTTAGATTCAGATCCTGAAGGCGAATCCGACTaGTCATCAGACACCTTTAATGGTGTCAAAACAACA +
Preference number: 3 (lower is better)
Translates to: PFLDSDPEGESD*SSDTFNGVKTT
Trigger: TGTTGTTTTGACACCATTAAAGGTGTCTGATGAGCAGTCGGATTCGCCTTCAGGATCTGAATCTAAAAATGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593195.6
3UTR CCA 72 bp AATCTCTACTTTCATTTCTTATCCCATCAGGTGACTTaGAGGGCTCTGATGACTTGGAAGTATGTGAGGTTT +
Preference number: 3 (lower is better)
Translates to: NLYFHFLSHQVT*RALMTWKYVRF
Trigger: AAACCTCACATACTTCCAAGTCATCAGAGCCCTCCAAGTCACCTGATGGGATAAGAAATGAAAGTAGAGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CAA 90 bp TGTCTTTATACACCTCAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATGTTGACGCTTTAGCCTaGGGTAGTCCCTTTTATCAT +
Preference number: 3 (lower is better)
Translates to: CLYTPQAYAYLIGGGLGNVDALA*GSPFYH
Trigger: ATGATAAAAGGGACTACCCAAGGCTAAAGCGTCAAC...ATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTGAGGTGTATAAAGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR CAA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTGGGCATGGTTGGTTTTaGTTTTCTTTCATCTTCCCT +
Preference number: 3 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPGHGWF*FSFIFP
Trigger: AGGGAAGATGAAAGAAAACAAAAACCAACCATGCCC...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR CAA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACATCCCATGTGAAAATATaGGTCATTCTTACCCTGGAT +
Preference number: 3 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTSHVKI*VILTLD
Trigger: ATCCAGGGTAAGAATGACCAATATTTTCACATGGGA...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR CAA 90 bp ACAATGAAGGAACTGATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCGGCTGGTTAAGTGCATaGCTAACTAACTTTCTCAGT +
Preference number: 3 (lower is better)
Translates to: TMKELIMSSVSHQPQLYLGWLSA*LTNFLS
Trigger: ACTGAGAAAGTTAGTTAGCAATGCACTTAACCAGCC...GAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTATCAGTTCCTTCATTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR CAA 90 bp TGTCTTATGATTTTCATCCTGGCATTCACAGATACTAGTCTCTACCTCTTCTGCACACGAGGAACAGTCTaGTTTACCATCATTGAGACT +
Preference number: 3 (lower is better)
Translates to: CLMIFILAFTDTSLYLFCTRGTV*FTIIET
Trigger: AGTCTCAATGATGGTAAACAAGACTGTTCCTCGTGT...GCAGAAGAGGTAGAGACTAGTATCTGTGAATGCCAGGATGAAAATCATAAGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CAA 90 bp GGATTGACAATAATGACACCAGTCGAACCTTCCATTTTTGTTTCAGGGGTAGAATTCAGGAGGTGCTATTaGGGGTTCTTCATGAGAATT +
Preference number: 3 (lower is better)
Translates to: GLTIMTPVEPSIFVSGVEFRRCY*GFFMRI
Trigger: AATTCTCATGAAGAACCCCAAATAGCACCTCCTGAA...TTCTACCCCTGAAACAAAAATGGAAGGTTCGACTGGTGTCATTATTGTCAATCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CAA 90 bp CTTGTTGCTAGGAGATCTACAGTTTGGATTGACAATAATGACACCAGTCGAACCGATGTTAAAGGTAAGTaGGATACTGGTGATGCTTCA +
Preference number: 3 (lower is better)
Translates to: LVARRSTVWIDNNDTSRTDVKGK*DTGDAS
Trigger: TGAAGCATCACCAGTATCCAACTTACCTTTAACATC...GGTTCGACTGGTGTCATTATTGTCAATCCAAACTGTAGATCTCCTAGCAACAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CAA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTGCATTATTCTATTTGTaGTTGCTGATGCTATTTGGC +
Preference number: 3 (lower is better)
Translates to: FKKIWPTSARSEARMNGCALFYL*LLMLFG
Trigger: GCCAAATAGCATCAGCAACAACAAATAGAATAATGC...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR CAA 90 bp ACAATGAAGGAACTGATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCAAATGGGGCATTGACTaGTATACACATGGACAGATA +
Preference number: 3 (lower is better)
Translates to: TMKELIMSSVSHQPQLYLKWGID*YTHGQI
Trigger: TATCTGTCCATGTGTATACAAGTCAATGCCCCATTT...GAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTATCAGTTCCTTCATTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR CAA 90 bp TGCATAACCACTTTAACTCATTCCTCTCATTCTCCTTACACATCTGCATTTCCGAACAAAAATGGGGCATaGACTTGTATACACATGGAC +
Preference number: 3 (lower is better)
Translates to: CITTLTHSSHSPYTSAFPNKNGA*TCIHMD
Trigger: GTCCATGTGTATACAAGTCAATGCCCCATTTTTGTT...CGGAAATGCAGATGTGTAAGGAGAATGAGAGGAATGAGTTAAAGTGGTTATGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR CAA 90 bp TGTCTTTATACACCTCAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATGGGCATGGTTGGTTTTaGTTTTCTTTCATCTTCCCT +
Preference number: 3 (lower is better)
Translates to: CLYTPQAYAYLIGGGLGNGHGWF*FSFIFP
Trigger: AGGGAAGATGAAAGAAAACAAAAACCAACCATGCCC...ATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTGAGGTGTATAAAGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR CAA 90 bp GCTCATCAGACACCTTTAATGGTGTCAAAACAACACGAGGAACAGTCTTGTTTAAATCATCATGGAAAGTaGTCCCAAATCCTTCATTGG +
Preference number: 3 (lower is better)
Translates to: AHQTPLMVSKQHEEQSCLNHHGK*SQILHW
Trigger: CCAATGAAGGATTTGGGACAACTTTCCATGATGATT...TAAACAAGACTGTTCCTCGTGTTGTTTTGACACCATTAAAGGTGTCTGATGAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593195.6
3UTR TCA 72 bp AAGTTATCTTCAGGAGGTGCTATTTGGGGTTCTTCATaGGAATTGGTTAGACTTTCAGCCTCCTCAGAAAAT +
Preference number: 3 (lower is better)
Translates to: KLSSGGAIWGSS*ELVRLSASSEN
Trigger: ATTTTCTGAGGAGGCTGAAAGTCTAACCAATTCTCATGAAGAACCCCAAATAGCACCTCCTGAAGATAACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR-3UTR CAA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTGCATTATTCTATTTGTaGTTGCTGATGCTATTTGGC +
Preference number: 3 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPALFYL*LLMLFG
Trigger: GCCAAATAGCATCAGCAACAACAAATAGAATAATGC...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR CAA 90 bp GAATATCCAAGGTCCAGCAGTCAACTAAACTTTCTATATAGCTCATCCCAGAAAAAATGGGGCATTGACTaGTATACACATGGACAGATA +
Preference number: 3 (lower is better)
Translates to: EYPRSSSQLNFLYSSSQKKWGID*YTHGQI
Trigger: TATCTGTCCATGTGTATACAAGTCAATGCCCCATTT...TTTCTGGGATGAGCTATATAGAAAGTTTAGTTGACTGCTGGACCTTGGATATTC
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR CAA 90 bp TGTCTTTATACACCTCAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATTCCCATGTGAAAATATaGGTCATTCTTACCCTGGAT +
Preference number: 3 (lower is better)
Translates to: CLYTPQAYAYLIGGGLGNSHVKI*VILTLD
Trigger: ATCCAGGGTAAGAATGACCAATATTTTCACATGGGA...ATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTGAGGTGTATAAAGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR-3UTR CAA 90 bp TTTATTAATGCCCTCAAGTTAGTGTTGACAAGAATAGATCCTGGGGTTTCTATGACACGAGGAACAGTCTaGTTTACCATCATTGAGACT +
Preference number: 3 (lower is better)
Translates to: FINALKLVLTRIDPGVSMTRGTV*FTIIET
Trigger: AGTCTCAATGATGGTAAACAAGACTGTTCCTCGTGT...CATAGAAACCCCAGGATCTATTCTTGTCAACACTAACTTGAGGGCATTAATAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593195.6
3UTR-3UTR CAA 90 bp TGGATTGACAATAATGACACCAGTCGAACCTTCCATTTTTGTTTCAGGGGTAGAACTCTGTGTACTCCCTaGCTTATGTGTTTTATTTCT +
Preference number: 3 (lower is better)
Translates to: WIDNNDTSRTFHFCFRGRTLCTP*LMCFIS
Trigger: AGAAATAAAACACATAAGCAAGGGAGTACACAGAGT...TCTACCCCTGAAACAAAAATGGAAGGTTCGACTGGTGTCATTATTGTCAATCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR TCA 72 bp CATATGCAAAGAATTCATTATTTAGAGCTGAAGTACTaGGGCGTAAAATTCCATCACTTCCCATCTGAAGGC +
Preference number: 3 (lower is better)
Translates to: HMQRIHYLELKY*GVKFHHFPSEG
Trigger: GCCTTCAGATGGGAAGTGATGGAATTTTACGCCTCAGTACTTCAGCTCTAAATAATGAATTCTTTGCATATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592541.6
3UTR GCA 72 bp AATGGGGCTACAGCAACATGTATTCTTACTCTCGACTaGATTATAAAGCACCATATGTACCAGCTTGTTTTT +
Preference number: 3 (lower is better)
Translates to: NGATATCILTLD*IIKHHMYQLVF
Trigger: AAAAACAAGCTGGTACATATGGTGCTTTATAATGCAGTCGAGAGTAAGAATACATGTTGCTGTAGCCCCATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR TCA 72 bp CATATGCAAAGAATTCATTATTTAGAGCTGAAGTACTaGGGCGTAAAATTCCATCACTTCCCATCTGCCTAT +
Preference number: 3 (lower is better)
Translates to: HMQRIHYLELKY*GVKFHHFPSAY
Trigger: ATAGGCAGATGGGAAGTGATGGAATTTTACGCCTCAGTACTTCAGCTCTAAATAATGAATTCTTTGCATATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593195.6
3UTR TCA 72 bp CTGAATTACAGATTCTTCAGGGATCAAGATATCCTCTaGCTCCAATTCTGCCATTATATCTTTAGGTGGAAT +
Preference number: 3 (lower is better)
Translates to: LNYRFFRDQDIL*LQFCHYIFRWN
Trigger: ATTCCACCTAAAGATATAATGGCAGAATTGGAGTCAGAGGATATCTTGATCCCTGAAGAATCTGTAATTCAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR GCA 72 bp TCTGAAAATGGAGCCTTATCCACTGATGAGATATATTaGTTGTCCTGTAATTTAGCAGATGGAAGCTCATTT +
Preference number: 3 (lower is better)
Translates to: SENGALSTDEIY*LSCNLADGSSF
Trigger: AAATGAGCTTCCATCTGCTAAATTACAGGACAAGCAATATATCTCATCAGTGGATAAGGCTCCATTTTCAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR GCA 72 bp AAAGCTAGGTTCAGAGAAGTCAACTGTAAAATTCCTTaGTGTAATGGCTCATCTATAGAAAAATGCATAACC +
Preference number: 3 (lower is better)
Translates to: KARFREVNCKIP*CNGSSIEKCIT
Trigger: GGTTATGCATTTTTCTATAGATGAGCCATTACAGCAAGGAATTTTACAGTTGACTTCTCTGAACCTAGCTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR CCA 72 bp GTTTGCTTTTTAAATTCTACAGCCACAATCAATCAATaGGTTAATGGCACTCCACATTTTGTGCTCTGTAAT +
Preference number: 3 (lower is better)
Translates to: VCFLNSTATINQ*VNGTPHFVLCN
Trigger: ATTACAGAGCACAAAATGTGGAGTGCCATTAACCCATTGATTGATTGTGGCTGTAGAATTTAAAAAGCAAAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp ACAATGCTCGCTGCAGCAGCCACAGCAGCAGCTGCAGCAGCCTCTCGCTGGGCCAGCCACAGCAGCAGCTaGAGCAGCCTCTCGCTGGGC +
Preference number: 4 (lower is better)
Translates to: TMLAAAATAAAAAASRWASHSSS*SSLSLG
Trigger: GCCCAGCGAGAGGCTGCTGCAGCTGCTGCTGTGGCT...GGCCCAGCGAGAGGCTGCTGCAGCTGCTGCTGTGGCTGCTGCAGCGAGCATTGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTGACCCAGTGACCCGGTaGCCCGCACTCGCTCCGCGG +
Preference number: 4 (lower is better)
Translates to: CAGPHHRTDDATLGLASADPVTR*PALAPR
Trigger: CCGCGGAGCGAGTGCGGGTCACCGGGTCACTGGGTC...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp CAATGCTCGCTGCAGCAGCCACAGCAGCAGCTGCAGCAGCCTCTCGCTGGGCCCTGGAGGCCCTTCCTTTaGGCTGAGCGGAGGAGGCAA +
Preference number: 4 (lower is better)
Translates to: QCSLQQPQQQLQQPLAGPWRPFL*AERRRQ
Trigger: TTGCCTCCTCCGCTCAGCTCAAAGGAAGGGCCTCCA...GGGCCCAGCGAGAGGCTGCTGCAGCTGCTGCTGTGGCTGCTGCAGCGAGCATTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp ACAATGCTCGCTGCAGCAGCCACAGCAGCAGCTGCAGCAGCCTCTCGCTGGGCCCCGGGCCTTGATATCTaGGAGGGTCCTGGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: TMLAAAATAAAAAASRWAPGLDI*EGPGSC
Trigger: ACAGGAGCCAGGACCCTCGCAGATATCAAGGCCCGG...GGCCCAGCGAGAGGCTGCTGCAGCTGCTGCTGTGGCTGCTGCAGCGAGCATTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTGGGCAAAGCCAAGGGTaGAGGGGGAGGGGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: CAGPHHRTDDATLGLASAGQSQG*RGRGRR
Trigger: CCGCCTCCCCCTCCCCCTCCACCCTTGGCTTTGCCC...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp CTCCTGGACTTCCCATGGCTCCAGAGACAATGCTCGCTGCAGCAGCCACAGCAGGCCCTTCCTTTGAGCTaGGCGGAGGAGGCAACCGGG +
Preference number: 4 (lower is better)
Translates to: LLDFPWLQRQCSLQQPQQALPLS*AEEATG
Trigger: CCCGGTTGCCTCCTCCGCTCAGCTCAAAGGAAGGGC...CTGCTGTGGCTGCTGCAGCGAGCATTGTCTCTGGAGCCATGGGAAGTCCAGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTGCCCTTCCTTTGAGCTaGGCGGAGGAGGCAACCGGG +
Preference number: 4 (lower is better)
Translates to: CAGPHHRTDDATLGLASAALPLS*AEEATG
Trigger: CCCGGTTGCCTCCTCCGCTCAGCTCAAAGGAAGGGC...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTGGACAGACGACAGCCTaGGCTCCCTGCACCAGGGAC +
Preference number: 4 (lower is better)
Translates to: CAGPHHRTDDATLGLASAGQTTA*APCTRD
Trigger: GTCCCTGGTGCAGGGAGCTCAGGCTGTCGTCTGTCC...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp CAATGCTCGCTGCAGCAGCCACAGCAGCAGCTGCAGCAGCCTCTCGCTGGGCCCAAGTGGTCTCAGAGGTaGGAAGCATGGAAGACACTG +
Preference number: 4 (lower is better)
Translates to: QCSLQQPQQQLQQPLAGPKWSQR*EAWKTL
Trigger: CAGTGTCTTCCATGCTTCTCACCTCTGAGACCACTT...GGGCCCAGCGAGAGGCTGCTGCAGCTGCTGCTGTGGCTGCTGCAGCGAGCATTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp ACAATGCTCGCTGCAGCAGCCACAGCAGCAGCTGCAGCAGCCTCTCGCTGGGCCGCCAGAAGTCCCACATaGAGAACTACTTTGAGCTCC +
Preference number: 4 (lower is better)
Translates to: TMLAAAATAAAAAASRWAARSPT*RTTLSS
Trigger: GGAGCTCAAAGTAGTTCTTCATGTGGGACTTCTGGC...GGCCCAGCGAGAGGCTGCTGCAGCTGCTGCTGTGGCTGCTGCAGCGAGCATTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTCAGCCTCGGCCCAGGTaGGGTCCTTCTTCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: CAGPHHRTDDATLGLASAQPRPR*GPSSSS
Trigger: AGAGGAAGAAGAAGGACCGCACCTGGGCCGAGGCTG...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp CAATGCTCGCTGCAGCAGCCACAGCAGCAGCTGCAGCAGCCTCTCGCTGGGCCCTTTTGGCTGTTGTTCTaGCAAGGCTGTCTGTGCAGA +
Preference number: 4 (lower is better)
Translates to: QCSLQQPQQQLQQPLAGPFWLLF*QGCLCR
Trigger: TCTGCACAGACAGCCTTGGCAGAACAACAGCCAAAA...GGGCCCAGCGAGAGGCTGCTGCAGCTGCTGCTGTGGCTGCTGCAGCGAGCATTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp AGCGGAGGAGGCAACCGGGTCTCTTTAGAGGTCTGGAAGAGATGGGCTCGAGCTGAGAGGGGGAACCCTTaGTTCCTCTCTGGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: SGGGNRVSLEVWKRWARAERGNP*FLSGRL
Trigger: CAGCCTCCCAGAGAGGAACCAAGGGTTCCCCCTCTC...AGCTCGAGCCCATCTCTTCCAGACCTCTAAAGAGACCCGGTTGCCTCCTCCGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp TACAGTGGTGGTCTCCCGGAGGTGGGCAGACTTGTTGCTAGGAGATCTACAGTTGCAGCAGCCTCTCGCTaGGCCCGAGCTTGTTGGGCC +
Preference number: 4 (lower is better)
Translates to: YSGGLPEVGRLVARRSTVAAASR*ARACWA
Trigger: GGCCCAACAAGCTCGGGCCCAGCGAGAGGCTGCTGC...AACTGTAGATCTCCTAGCAACAAGTCTGCCCACCTCCGGGAGACCACCACTGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp CTCCTGGACTTCCCATGGCTCCAGAGACAATGCTCGCTGCAGCAGCCACAGCAGACTGCTGTAGTACAGTaGTGGTCTCCCGGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: LLDFPWLQRQCSLQQPQQTAVVQ*WSPGGG
Trigger: CCCACCTCCGGGAGACCACCACTGTACTACAGCAGT...CTGCTGTGGCTGCTGCAGCGAGCATTGTCTCTGGAGCCATGGGAAGTCCAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTCAGCTACCGCTGTGCTaGGCCTCACCACCGTACAGA +
Preference number: 4 (lower is better)
Translates to: CAGPHHRTDDATLGLASAQLPLC*ASPPYR
Trigger: TCTGTACGGTGGTGAGGCCCAGCACAGCGGTAGCTG...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTACCGCGGCCGCTGCGGTaGCAGCTCCGGGGATGCTCC +
Preference number: 4 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVPRPLR*QLRGCS
Trigger: GGAGCATCCCCGGAGCTGTCACCGCAGCGGCCGCGG...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp ACAATGCTCGCTGCAGCAGCCACAGCAGCAGCTGCAGCAGCCTCTCGCTGGGCCCCAATTTTGGAAAGCTaGATCTTGAGAGGGGGAACC +
Preference number: 4 (lower is better)
Translates to: TMLAAAATAAAAAASRWAPILES*ILRGGT
Trigger: GGTTCCCCCTCTCAAGATTCAGCTTTCCAAAATTGG...GGCCCAGCGAGAGGCTGCTGCAGCTGCTGCTGTGGCTGCTGCAGCGAGCATTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp ACAATGCTCGCTGCAGCAGCCACAGCAGCAGCTGCAGCAGCCTCTCGCTGGGCCAGATGGGCTCGAGCTTaGTGCTTTGCAAAGAGCTTA +
Preference number: 4 (lower is better)
Translates to: TMLAAAATAAAAAASRWARWARA*CFAKSL
Trigger: TAAGCTCTTTGCAAAGCATCAAGCTCGAGCCCATCT...GGCCCAGCGAGAGGCTGCTGCAGCTGCTGCTGTGGCTGCTGCAGCGAGCATTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp GTTGTTCTGCCAAGGCTGTCTGTGCAGAAACTGGAAGGCCAGAAGTCCCACATGGCCCTTCCTTTGAGCTaGGCGGAGGAGGCAACCGGG +
Preference number: 4 (lower is better)
Translates to: VVLPRLSVQKLEGQKSHMALPLS*AEEATG
Trigger: CCCGGTTGCCTCCTCCGCTCAGCTCAAAGGAAGGGC...CATGTGGGACTTCTGGCCTTCCAGTTTCTGCACAGACAGCCTTGGCAGAACAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTCTAATCACAGACACCTaGGGACACGCCACGGGCTGT +
Preference number: 4 (lower is better)
Translates to: CAGPHHRTDDATLGLASALITDT*GHATGC
Trigger: ACAGCCCGTGGCGTGTCCTCAGGTGTCTGTGATTAG...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp GGCAGGCTGGTACAGGCTCCCTCTGGGCTCTCAGAAGAAAAGGACGTTTCAGAGCCGGGCCTTGATATCTaGGAGGGTCCTGGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: GRLVQAPSGLSEEKDVSEPGLDI*EGPGSC
Trigger: ACAGGAGCCAGGACCCTCGCAGATATCAAGGCCCGG...CTCTGAAACGTCCTTTTCTTCTGAGAGCCCAGAGGGAGCCTGTACCAGCCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp ACAGTGGTGGTCTCCCGGAGGTGGGCAGACTTGTTGCTAGGAGATCTACAGTTTAGCCACAGCAGCAGCTaGAGCAGCCTCTCGCTGGGC +
Preference number: 4 (lower is better)
Translates to: TVVVSRRWADLLLGDLQFSHSSS*SSLSLG
Trigger: GCCCAGCGAGAGGCTGCTGCAGCTGCTGCTGTGGCT...AAACTGTAGATCTCCTAGCAACAAGTCTGCCCACCTCCGGGAGACCACCACTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp GTTCTCGTCTTTCCACCCTCTCCTGGACTTCCCATGGCTCCAGAGACAATGCTCCTGGAGAAGGCAGGCTaGTACAGGCTCCCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: VLVFPPSPGLPMAPETMLLEKAG*YRLPLG
Trigger: GCCCAGAGGGAGCCTGTACCAGCCTGCCTTCTCCAG...GAGCATTGTCTCTGGAGCCATGGGAAGTCCAGGAGAGGGTGGAAAGACGAGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp GCCAGAGTTCTCGTCTTTCCACCCTCTCCTGGACTTCCCATGGCTCCAGAGACATATCTGCGAGGGTCCTaGCTCCTGTGTTCCTCCCGC +
Preference number: 4 (lower is better)
Translates to: ARVLVFPPSPGLPMAPETYLRGS*LLCSSR
Trigger: GCGGGAGGAACACAGGAGCCAGGACCCTCGCAGATA...TGTCTCTGGAGCCATGGGAAGTCCAGGAGAGGGTGGAAAGACGAGAACTCTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp CTTGGGTTAAGAGACTGCTGTAGTACAGTGGTGGTCTCCCGGAGGTGGGCAGACTATCTGCGAGGGTCCTaGCTCCTGTGTTCCTCCCGC +
Preference number: 4 (lower is better)
Translates to: LGLRDCCSTVVVSRRWADYLRGS*LLCSSR
Trigger: GCGGGAGGAACACAGGAGCCAGGACCCTCGCAGATA...GTCTGCCCACCTCCGGGAGACCACCACTGTACTACAGCAGTCTCTTAACCCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTGTGGTCTCCCGGAGGTaGGCAGACTTGTTGCTAGGA +
Preference number: 4 (lower is better)
Translates to: CAGPHHRTDDATLGLASAVVSRR*ADLLLG
Trigger: TCCTAGCAACAAGTCTGCCCACCTCCGGGAGACCAC...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp CTGGAGAAGGCAGGCTGGTACAGGCTCCCTCTGGGCTCTCAGAAGAAAAGGACGGTGGTCTCCCGGAGGTaGGCAGACTTGTTGCTAGGA +
Preference number: 4 (lower is better)
Translates to: LEKAGWYRLPLGSQKKRTVVSRR*ADLLLG
Trigger: TCCTAGCAACAAGTCTGCCCACCTCCGGGAGACCAC...CGTCCTTTTCTTCTGAGAGCCCAGAGGGAGCCTGTACCAGCCTGCCTTCTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp CTCCTGGACTTCCCATGGCTCCAGAGACAATGCTCGCTGCAGCAGCCACAGCAGTCCCATCAGGTGACTTaGAGGGCTCTGATGACTTGG +
Preference number: 4 (lower is better)
Translates to: LLDFPWLQRQCSLQQPQQSHQVT*RALMTW
Trigger: CCAAGTCATCAGAGCCCTCCAAGTCACCTGATGGGA...CTGCTGTGGCTGCTGCAGCGAGCATTGTCTCTGGAGCCATGGGAAGTCCAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp GTTCCTCCCGCCACTGACAGATGTGCTAGTGGATGCTCGAGACTCAGGTTTGGATATCTGCGAGGGTCCTaGCTCCTGTGTTCCTCCCGC +
Preference number: 4 (lower is better)
Translates to: VPPATDRCASGCSRLRFGYLRGS*LLCSSR
Trigger: GCGGGAGGAACACAGGAGCCAGGACCCTCGCAGATA...TCCAAACCTGAGTCTCGAGCATCCACTAGCACATCTGTCAGTGGCGGGAGGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp GGCAGGCTGGTACAGGCTCCCTCTGGGCTCTCAGAAGAAAAGGACGTTTCAGAGGTGGTCTCCCGGAGGTaGGCAGACTTGTTGCTAGGA +
Preference number: 4 (lower is better)
Translates to: GRLVQAPSGLSEEKDVSEVVSRR*ADLLLG
Trigger: TCCTAGCAACAAGTCTGCCCACCTCCGGGAGACCAC...CTCTGAAACGTCCTTTTCTTCTGAGAGCCCAGAGGGAGCCTGTACCAGCCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTACTTTTGAAAGGAGCTaGGCCACGTGCCTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: CAGPHHRTDDATLGLASATFERS*ATCLLS
Trigger: GCTGAGCAGGCACGTGGCCCAGCTCCTTTCAAAAGT...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTCCGCGGCCGCTGCGGTaGCAGCTCCGGGGATGCTCC +
Preference number: 4 (lower is better)
Translates to: FKKIWPTSARSEARMNGCPRPLR*QLRGCS
Trigger: GGAGCATCCCCGGAGCTGTCACCGCAGCGGCCGCGG...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp TCCTGGACTTCCCATGGCTCCAGAGACAATGCTCGCTGCAGCAGCCACAGCAGCTGGAAAGCTGAATCTTaGGAGGGGGAACCCTTGGTT +
Preference number: 4 (lower is better)
Translates to: SWTSHGSRDNARCSSHSSWKAES*EGEPLV
Trigger: AACCAAGGGTTCCCCCTCTCAAGATTCAGCTTTCCA...GCTGCTGTGGCTGCTGCAGCGAGCATTGTCTCTGGAGCCATGGGAAGTCCAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp TACAGTGGTGGTCTCCCGGAGGTGGGCAGACTTGTTGCTAGGAGATCTACAGTTTGGAGGCCCTTCCTTTaGGCTGAGCGGAGGAGGCAA +
Preference number: 4 (lower is better)
Translates to: YSGGLPEVGRLVARRSTVWRPFL*AERRRQ
Trigger: TTGCCTCCTCCGCTCAGCTCAAAGGAAGGGCCTCCA...AACTGTAGATCTCCTAGCAACAAGTCTGCCCACCTCCGGGAGACCACCACTGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTTGCTCAGCAAAGTTATaGCTGGGAGCAGTCGGCTCA +
Preference number: 4 (lower is better)
Translates to: CAGPHHRTDDATLGLASACSAKL*LGAVGS
Trigger: TGAGCCGACTGCTCCCAGTCATAACTTTGCTGAGCA...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTAAACTGCTGTCTGTGTaGGGTACCAGCGTCAGTGTG +
Preference number: 4 (lower is better)
Translates to: CAGPHHRTDDATLGLASAKLLSV*GTSVSV
Trigger: CACACTGACGCTGGTACCTCACACAGACAGCAGTTT...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp GTTGTTCTGCCAAGGCTGTCTGTGCAGAAACTGGAAGGCCAGAAGTCCCACATGCAGCCTCGGCCCAGGTaGGGTCCTTCTTCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: VVLPRLSVQKLEGQKSHMQPRPR*GPSSSS
Trigger: AGAGGAAGAAGAAGGACCGCACCTGGGCCGAGGCTG...CATGTGGGACTTCTGGCCTTCCAGTTTCTGCACAGACAGCCTTGGCAGAACAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp CTGGAGAAGGCAGGCTGGTACAGGCTCCCTCTGGGCTCTCAGAAGAAAAGGACGGGTAAACTCTCCTTCTaGCAGTCGCTGTTTCCACCC +
Preference number: 4 (lower is better)
Translates to: LEKAGWYRLPLGSQKKRTGKLSF*QSLFPP
Trigger: GGGTGGAAACAGCGACTGGCAGAAGGAGAGTTTACC...CGTCCTTTTCTTCTGAGAGCCCAGAGGGAGCCTGTACCAGCCTGCCTTCTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTCCAGAGGCTGTCCTGTaGTCCTCATCCCATCATCAT +
Preference number: 4 (lower is better)
Translates to: CAGPHHRTDDATLGLASAPEAVL*SSSHHH
Trigger: ATGATGATGGGATGAGGAGCACAGGACAGCCTCTGG...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp TCCTGGACTTCCCATGGCTCCAGAGACAATGCTCGCTGCAGCAGCCACAGCAGCCTGCCTATCCACTTCTaGGAGCAAAAGCAGGAGGTA +
Preference number: 4 (lower is better)
Translates to: SWTSHGSRDNARCSSHSSLPIHF*EQKQEV
Trigger: TACCTCCTGCTTTTGCTCCCAGAAGTGGATAGGCAG...GCTGCTGTGGCTGCTGCAGCGAGCATTGTCTCTGGAGCCATGGGAAGTCCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592288.6
ENST00000593195.6
CDS-3UTR CCA 90 bp CTCCTGGACTTCCCATGGCTCCAGAGACAATGCTCGCTGCAGCAGCCACAGCAGCCGCAACTGCATTTCTaGGGTAAACTCTCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: LLDFPWLQRQCSLQQPQQPQLHF*GKLSFC
Trigger: GCAGAAGGAGAGTTTACCCCAGAAATGCAGTTGCGG...CTGCTGTGGCTGCTGCAGCGAGCATTGTCTCTGGAGCCATGGGAAGTCCAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTGTACCAGCGTCAGTGTaGAAGCCGCCATTCTTGTCA +
Preference number: 4 (lower is better)
Translates to: CAGPHHRTDDATLGLASAVPASV*KPPFLS
Trigger: TGACAAGAATGGCGGCTTCCACACTGACGCTGGTAC...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp CAATGCTCGCTGCAGCAGCCACAGCAGCAGCTGCAGCAGCCTCTCGCTGGGCCCTCCCAAATCCTTCATTaGAGGAAGATCCTTCATACA +
Preference number: 4 (lower is better)
Translates to: QCSLQQPQQQLQQPLAGPSQILH*RKILHT
Trigger: TGTATGAAGGATCTTCCTCCAATGAAGGATTTGGGA...GGGCCCAGCGAGAGGCTGCTGCAGCTGCTGCTGTGGCTGCTGCAGCGAGCATTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp CAATGCTCGCTGCAGCAGCCACAGCAGCAGCTGCAGCAGCCTCTCGCTGGGCCCTCAGGTATTGTCTTATaGTTTTCATCCTGGCATTCA +
Preference number: 4 (lower is better)
Translates to: QCSLQQPQQQLQQPLAGPSGIVL*FSSWHS
Trigger: TGAATGCCAGGATGAAAATCATAAGACAATACCTGA...GGGCCCAGCGAGAGGCTGCTGCAGCTGCTGCTGTGGCTGCTGCAGCGAGCATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp ACAATGCTCGCTGCAGCAGCCACAGCAGCAGCTGCAGCAGCCTCTCGCTGGGCCGACATGAGTCATAGATaGAGTGGAAGGAATAAGAGA +
Preference number: 4 (lower is better)
Translates to: TMLAAAATAAAAAASRWADMSHR*SGRNKR
Trigger: TCTCTTATTCCTTCCACTTCATCTATGACTCATGTC...GGCCCAGCGAGAGGCTGCTGCAGCTGCTGCTGTGGCTGCTGCAGCGAGCATTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp AGCGGAGGAGGCAACCGGGTCTCTTTAGAGGTCTGGAAGAGATGGGCTCGAGCTAGCAAGTTCTGGAATTaGAGCAGGGTAGGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: SGGGNRVSLEVWKRWARASKFWN*SRVGLL
Trigger: GAGAAGCCCTACCCTGCTTCAATTCCAGAACTTGCT...AGCTCGAGCCCATCTCTTCCAGACCTCTAAAGAGACCCGGTTGCCTCCTCCGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTCCTTTGTCTGCTCTTTaGTGTGTGCCAGAGTTCTCG +
Preference number: 4 (lower is better)
Translates to: CAGPHHRTDDATLGLASAPLSAL*CVPEFS
Trigger: CGAGAACTCTGGCACACATCAAAGAGCAGACAAAGG...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTCCTGGGATGAAGTTCTaGCACGTTCAAGTAGTTGGC +
Preference number: 4 (lower is better)
Translates to: CAGPHHRTDDATLGLASAPGMKF*HVQVVG
Trigger: GCCAACTACTTGAACGTGTCAGAACTTCATCCCAGG...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp AGGGGGAACCCTTGGTTCCTCTCTGGGAGGCTGTTCTTTCTCAGGTGGGCTGCTAGCCATGCCGGGGTCTaGAACCAGACTTGTTTCTTT +
Preference number: 4 (lower is better)
Translates to: RGNPWFLSGRLFFLRWAASHAGV*NQTCFF
Trigger: AAAGAAACAAGTCTGGTTTCAGACCCCGGCATGGCT...AGCAGCCCACCTGAGAAAGAACAGCCTCCCAGAGAGGAACCAAGGGTTCCCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593195.6
CDS-3UTR GCA 90 bp CAATGCTCGCTGCAGCAGCCACAGCAGCAGCTGCAGCAGCCTCTCGCTGGGCCCCCAGTGGGAGATTTTTaGCCATGTTTCATTTCTTTA +
Preference number: 4 (lower is better)
Translates to: QCSLQQPQQQLQQPLAGPPVGDF*PCFISL
Trigger: TAAAGAAATGAAACATGGGCAAAAATCTCCCACTGG...GGGCCCAGCGAGAGGCTGCTGCAGCTGCTGCTGTGGCTGCTGCAGCGAGCATTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000592288.6
ENST00000593195.6
CDS-3UTR GCA 90 bp TGCTCTTTGATGTGTGCCAGAGTTCTCGTCTTTCCACCCTCTCCTGGACTTCCCAGAGACAATGCTCGCTaGAGCAGCCACAGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: CSLMCARVLVFPPSPGLPRDNAR*SSHSSS
Trigger: GCTGCTGCTGTGGCTGCTGCAGCGAGCATTGTCTCT...GGGAAGTCCAGGAGAGGGTGGAAAGACGAGAACTCTGGCACACATCAAAGAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTATTCTCGGAGACTTGTaGAGGTGGCCGGCAATGTTT +
Preference number: 4 (lower is better)
Translates to: CAGPHHRTDDATLGLASAILGDL*RWPAMF
Trigger: AAACATTGCCGGCCACCTGCACAAGTCTCCGAGAAT...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTCTGCCTATCCACTTCTaGGAGCAAAAGCAGGAGGTA +
Preference number: 4 (lower is better)
Translates to: CAGPHHRTDDATLGLASALPIHF*EQKQEV
Trigger: TACCTCCTGCTTTTGCTCCCAGAAGTGGATAGGCAG...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp AGGGGGAACCCTTGGTTCCTCTCTGGGAGGCTGTTCTTTCTCAGGTGGGCTGCTTGTCTGTGCAGAAACTaGAAGGCCAGAAGTCCCACA +
Preference number: 4 (lower is better)
Translates to: RGNPWFLSGRLFFLRWAACLCRN*KARSPT
Trigger: TGTGGGACTTCTGGCCTTCCAGTTTCTGCACAGACA...AGCAGCCCACCTGAGAAAGAACAGCCTCCCAGAGAGGAACCAAGGGTTCCCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp AGCGGAGGAGGCAACCGGGTCTCTTTAGAGGTCTGGAAGAGATGGGCTCGAGCTTGTCTGTGCAGAAACTaGAAGGCCAGAAGTCCCACA +
Preference number: 4 (lower is better)
Translates to: SGGGNRVSLEVWKRWARACLCRN*KARSPT
Trigger: TGTGGGACTTCTGGCCTTCCAGTTTCTGCACAGACA...AGCTCGAGCCCATCTCTTCCAGACCTCTAAAGAGACCCGGTTGCCTCCTCCGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp CCTTCCTTTGAGCTGAGCGGAGGAGGCAACCGGGTCTCTTTAGAGGTCTGGAAGTCTCTCCCAGAGGTTTaGCAGTGGCGGAAGACTCAT +
Preference number: 4 (lower is better)
Translates to: PSFELSGGGNRVSLEVWKSLPEV*QWRKTH
Trigger: ATGAGTCTTCCGCCACTGCCAAACCTCTGGGAGAGA...CTTCCAGACCTCTAAAGAGACCCGGTTGCCTCCTCCGCTCAGCTCAAAGGAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTGACAGATTCTTCTGCTaGGAGGTAAGGTTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: CAGPHHRTDDATLGLASADRFFC*EVRFSP
Trigger: GGGAGAGAACCTTACCTCCCAGCAGAAGAATCTGTC...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp CTTTGTCTGCTCTTTGATGTGTGCCAGAGTTCTCGTCTTTCCACCCTCTCCTGGGAGAGGGGGAACCCTTaGTTCCTCTCTGGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: LCLLFDVCQSSRLSTLSWERGNP*FLSGRL
Trigger: CAGCCTCCCAGAGAGGAACCAAGGGTTCCCCCTCTC...CCAGGAGAGGGTGGAAAGACGAGAACTCTGGCACACATCAAAGAGCAGACAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp CGGAGGTGGGCAGACTTGTTGCTAGGAGATCTACAGTTTGGATTGACAATAATGGCAGCAGCCTCTCGCTaGGCCCGAGCTTGTTGGGCC +
Preference number: 4 (lower is better)
Translates to: RRWADLLLGDLQFGLTIMAAASR*ARACWA
Trigger: GGCCCAACAAGCTCGGGCCCAGCGAGAGGCTGCTGC...CATTATTGTCAATCCAAACTGTAGATCTCCTAGCAACAAGTCTGCCCACCTCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp CTGGAGAAGGCAGGCTGGTACAGGCTCCCTCTGGGCTCTCAGAAGAAAAGGACGGTCTCTTTAGAGGTCTaGAAGAGATGGGCTCGAGCT +
Preference number: 4 (lower is better)
Translates to: LEKAGWYRLPLGSQKKRTVSLEV*KRWARA
Trigger: AGCTCGAGCCCATCTCTTCCAGACCTCTAAAGAGAC...CGTCCTTTTCTTCTGAGAGCCCAGAGGGAGCCTGTACCAGCCTGCCTTCTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTGCTTGGCTCCCAATCTaGGCTGTGGCAACACTTTTT +
Preference number: 4 (lower is better)
Translates to: CAGPHHRTDDATLGLASAAWLPI*AVATLF
Trigger: AAAAAGTGTTGCCACAGCCCAGATTGGGAGCCAAGC...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTTCTCGCTTTCTCATTTaGAGTGGTGCCAGAGTCCCT +
Preference number: 4 (lower is better)
Translates to: CAGPHHRTDDATLGLASASRFLI*SGARVP
Trigger: AGGGACTCTGGCACCACTCCAAATGAGAAAGCGAGA...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR CAA 72 bp TTCTTCTGCTGGGAGGTAAGGTTCTCTCCCAGAGGTTaGGCAGTGGCGGAAGACTCATCTTTCTGCGGGGAG +
Preference number: 4 (lower is better)
Translates to: FFCWEVRFSPRG*AVAEDSSFCGE
Trigger: CTCCCCGCAGAAAGATGAGTCTTCCGCCACTGCCAAACCTCTGGGAGAGAACCTTACCTCCCAGCAGAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp ACAATGCTCGCTGCAGCAGCCACAGCAGCAGCTGCAGCAGCCTCTCGCTGGGCCAATCGTTTTAAGTGCTaGCTTGTTTGTTTTCCAGTG +
Preference number: 4 (lower is better)
Translates to: TMLAAAATAAAAAASRWANRFKC*LVCFPV
Trigger: CACTGGAAAACAAACAAGTCAGCACTTAAAACGATT...GGCCCAGCGAGAGGCTGCTGCAGCTGCTGCTGTGGCTGCTGCAGCGAGCATTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000592288.6
ENST00000593195.6
CDS-3UTR TCA 90 bp TCCTGGACTTCCCATGGCTCCAGAGACAATGCTCGCTGCAGCAGCCACAGCAGCCATGAAGAACTACTTTaGGCTCCAGCGTTGTTTGGT +
Preference number: 4 (lower is better)
Translates to: SWTSHGSRDNARCSSHSSHEELL*APALFG
Trigger: ACCAAACAACGCTGGAGCTCAAAGTAGTTCTTCATG...GCTGCTGTGGCTGCTGCAGCGAGCATTGTCTCTGGAGCCATGGGAAGTCCAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp CTTGGGTTAAGAGACTGCTGTAGTACAGTGGTGGTCTCCCGGAGGTGGGCAGACGCCAGAAGTCCCACATaGAGAACTACTTTGAGCTCC +
Preference number: 4 (lower is better)
Translates to: LGLRDCCSTVVVSRRWADARSPT*RTTLSS
Trigger: GGAGCTCAAAGTAGTTCTTCATGTGGGACTTCTGGC...GTCTGCCCACCTCCGGGAGACCACCACTGTACTACAGCAGTCTCTTAACCCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp CTTGGGTTAAGAGACTGCTGTAGTACAGTGGTGGTCTCCCGGAGGTGGGCAGACAAGTGGTCTCAGAGGTaGGAAGCATGGAAGACACTG +
Preference number: 4 (lower is better)
Translates to: LGLRDCCSTVVVSRRWADKWSQR*EAWKTL
Trigger: CAGTGTCTTCCATGCTTCTCACCTCTGAGACCACTT...GTCTGCCCACCTCCGGGAGACCACCACTGTACTACAGCAGTCTCTTAACCCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp TCCTGGACTTCCCATGGCTCCAGAGACAATGCTCGCTGCAGCAGCCACAGCAGCGATTTACAGGTTTGCTaGCTCAGGGTCTTATTGTGC +
Preference number: 4 (lower is better)
Translates to: SWTSHGSRDNARCSSHSSDLQVC*LRVLLC
Trigger: GCACAATAAGACCCTGAGTCAGCAAACCTGTAAATC...GCTGCTGTGGCTGCTGCAGCGAGCATTGTCTCTGGAGCCATGGGAAGTCCAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTGACTTTACACGGAATTaGTCGGTTTATGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: CAGPHHRTDDATLGLASADFTRN*SVYGCW
Trigger: CCAGCAGCCATAAACCGATCAATTCCGTGTAAAGTC...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp GCCAGAGTTCTCGTCTTTCCACCCTCTCCTGGACTTCCCATGGCTCCAGAGACAAGACTAAATCCAACGTaGCATCTGCTGGGCATGACG +
Preference number: 4 (lower is better)
Translates to: ARVLVFPPSPGLPMAPETRLNPT*HLLGMT
Trigger: CGTCATGCCCAGCAGATGGCACGTTGGATTTAGTCT...TGTCTCTGGAGCCATGGGAAGTCCAGGAGAGGGTGGAAAGACGAGAACTCTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTGCCTTTTTGGTGTGCTaGTGGAAGGAAGACACTAAC +
Preference number: 4 (lower is better)
Translates to: CAGPHHRTDDATLGLASAAFLVC*WKEDTN
Trigger: GTTAGTGTCTTCCTTCCAGCAGCACACCAAAAAGGC...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp CTCCTGGACTTCCCATGGCTCCAGAGACAATGCTCGCTGCAGCAGCCACAGCAGGAAGGCGAATCCGACTaGTCATCAGACACCTTTAAT +
Preference number: 4 (lower is better)
Translates to: LLDFPWLQRQCSLQQPQQEGESD*SSDTFN
Trigger: ATTAAAGGTGTCTGATGAGCAGTCGGATTCGCCTTC...CTGCTGTGGCTGCTGCAGCGAGCATTGTCTCTGGAGCCATGGGAAGTCCAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp TGCTGCTGCCTCAAAGCCTGTTTAAGAGCCTTTTTGGTGTGCTGCTGGAAGGAACCGGGCCTTGATATCTaGGAGGGTCCTGGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: CCCLKACLRAFLVCCWKEPGLDI*EGPGSC
Trigger: ACAGGAGCCAGGACCCTCGCAGATATCAAGGCCCGG...TTCCTTCCAGCAGCACACCAAAAAGGCTCTTAAACAGGCTTTGAGGCAGCAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTCTGCTCTTTGATGTGTaGCAGAGTTCTCGTCTTTCC +
Preference number: 4 (lower is better)
Translates to: CAGPHHRTDDATLGLASALLFDV*QSSRLS
Trigger: GGAAAGACGAGAACTCTGGCACACATCAAAGAGCAG...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTAGGAAACTTGTTTCATaGCCAGTTCACAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: CAGPHHRTDDATLGLASARKLVS*PVHSCC
Trigger: GCAGCAGCTGTGAACTGGGCATGAAACAAGTTTCCT...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTGCCATTCAGTTGGGATaGATCCTCCCCTTTATGAGA +
Preference number: 4 (lower is better)
Translates to: CAGPHHRTDDATLGLASAAIQLG*ILPFMR
Trigger: TCTCATAAAGGGGAGGATGCATCCCAACTGAATGGC...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACAGATGGAGCGAGGGGGTaGGGTGGAGTGGGTGGGGGC +
Preference number: 4 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTDGARG*GGVGGG
Trigger: GCCCCCACCCACTCCACCCCACCCCCTCGCTCCATC...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTAGGCTCTGGAGAAGCTaGGCTTTTCATGCTTTTTGG +
Preference number: 4 (lower is better)
Translates to: CAGPHHRTDDATLGLASARLWRS*AFHAFW
Trigger: CCAAAAAGCATGAAAAGCCCAGCTTCTCCAGAGCCT...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp GTTCTCGTCTTTCCACCCTCTCCTGGACTTCCCATGGCTCCAGAGACAATGCTCGGTACAGGCTCCCTCTaGGCTCTCAGAAGAAAAGGA +
Preference number: 4 (lower is better)
Translates to: VLVFPPSPGLPMAPETMLGTGSL*ALRRKG
Trigger: TCCTTTTCTTCTGAGAGCCCAGAGGGAGCCTGTACC...GAGCATTGTCTCTGGAGCCATGGGAAGTCCAGGAGAGGGTGGAAAGACGAGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp CCATCAGGTGACTTGGAGGGCTCTGATGACTTGGAAGTATGTGAGGTTTCTAACCTGGAGAAGGCAGGCTaGTACAGGCTCCCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: PSGDLEGSDDLEVCEVSNLEKAG*YRLPLG
Trigger: GCCCAGAGGGAGCCTGTACCAGCCTGCCTTCTCCAG...GTTAGAAACCTCACATACTTCCAAGTCATCAGAGCCCTCCAAGTCACCTGATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTTCACAGTGGTACCCATaGATACAGTGGCCTGTTCTT +
Preference number: 4 (lower is better)
Translates to: CAGPHHRTDDATLGLASASQWYP*IQWPVL
Trigger: AAGAACAGGCCACTGTATCCATGGGTACCACTGTGA...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTTCCCAATCTGGGCTGTaGCAACACTTTTTCCAAAGG +
Preference number: 4 (lower is better)
Translates to: CAGPHHRTDDATLGLASASQSGL*QHFFQR
Trigger: CCTTTGGAAAAAGTGTTGCCACAGCCCAGATTGGGA...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTCTTACCATCTGGATTTaGAGAGCTGGGCGGAATTTC +
Preference number: 4 (lower is better)
Translates to: CAGPHHRTDDATLGLASALTIWI*RAGRNF
Trigger: GAAATTCCGCCCAGCTCTCCAAATCCAGATGGTAAG...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTTGGGCTTATGGCTATTaGCTGGCCAATTGCTCTCAT +
Preference number: 4 (lower is better)
Translates to: CAGPHHRTDDATLGLASAWAYGY*LANCSH
Trigger: ATGAGAGCAATTGGCCAGCCAATAGCCATAAGCCCA...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp TGTCTTTATACACCTCAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATGACCCAGTGACCCGGTaGCCCGCACTCGCTCCGCGG +
Preference number: 4 (lower is better)
Translates to: CLYTPQAYAYLIGGGLGNDPVTR*PALAPR
Trigger: CCGCGGAGCGAGTGCGGGTCACCGGGTCACTGGGTC...ATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTGAGGTGTATAAAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTATGTTCCGGGTTGACTaGTCATCTTCTATCCTAGCT +
Preference number: 4 (lower is better)
Translates to: CAGPHHRTDDATLGLASAMFRVD*SSSILA
Trigger: AGCTAGGATAGAAGATGATCAGTCAACCCGGAACAT...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp CTTGGGTTAAGAGACTGCTGTAGTACAGTGGTGGTCTCCCGGAGGTGGGCAGACAGATGGGCTCGAGCTTaGTGCTTTGCAAAGAGCTTA +
Preference number: 4 (lower is better)
Translates to: LGLRDCCSTVVVSRRWADRWARA*CFAKSL
Trigger: TAAGCTCTTTGCAAAGCATCAAGCTCGAGCCCATCT...GTCTGCCCACCTCCGGGAGACCACCACTGTACTACAGCAGTCTCTTAACCCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTTGCTGTTTTACCCACTaGGGTAGTTTGAAGAGGCAA +
Preference number: 4 (lower is better)
Translates to: CAGPHHRTDDATLGLASACCFTH*GSLKRQ
Trigger: TTGCCTCTTCAAACTACCTCAGTGGGTAAAACAGCA...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp GGCTGGTACAGGCTCCCTCTGGGCTCTCAGAAGAAAAGGACGTTTCAGAGATGCTTCTCCATGGGCATTTaGCTCGGCCATATCTGTACC +
Preference number: 4 (lower is better)
Translates to: GWYRLPLGSQKKRTFQRCFSMGI*LGHICT
Trigger: GGTACAGATATGGCCGAGGCAAATGCCCATGGAGAA...GCATCTCTGAAACGTCCTTTTCTTCTGAGAGCCCAGAGGGAGCCTGTACCAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp GCCAGAGTTCTCGTCTTTCCACCCTCTCCTGGACTTCCCATGGCTCCAGAGACACTTGGGTTAAGAGACTaGTGTAGTACAGTGGTGGTC +
Preference number: 4 (lower is better)
Translates to: ARVLVFPPSPGLPMAPETLGLRD*CSTVVV
Trigger: GACCACCACTGTACTACAGCAGTCTCTTAACCCAAG...TGTCTCTGGAGCCATGGGAAGTCCAGGAGAGGGTGGAAAGACGAGAACTCTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTCCAGTTCACAGCTGCTaGTTAAACCTTCCTCAAAAG +
Preference number: 4 (lower is better)
Translates to: CAGPHHRTDDATLGLASAPVHSC*LNLPQK
Trigger: CTTTTGAGGAAGGTTTAAGCAGCAGCTGTGAACTGG...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp CTCCTGGACTTCCCATGGCTCCAGAGACAATGCTCGCTGCAGCAGCCACAGCAGGGCTTGAATCTCGAGTaGAAGATGCTTCATCAGTTA +
Preference number: 4 (lower is better)
Translates to: LLDFPWLQRQCSLQQPQQGLNLE*KMLHQL
Trigger: TAACTGATGAAGCATCTTCCACTCGAGATTCAAGCC...CTGCTGTGGCTGCTGCAGCGAGCATTGTCTCTGGAGCCATGGGAAGTCCAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp GGCTGGTACAGGCTCCCTCTGGGCTCTCAGAAGAAAAGGACGTTTCAGAGATGCAGCTCCAGCGTTGTTTaGTCCAGTAGTGAGCTTCAC +
Preference number: 4 (lower is better)
Translates to: GWYRLPLGSQKKRTFQRCSSSVV*SSSELH
Trigger: GTGAAGCTCACTACTGGACCAAACAACGCTGGAGCT...GCATCTCTGAAACGTCCTTTTCTTCTGAGAGCCCAGAGGGAGCCTGTACCAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTACTGGAGAAGGCAGGCTaGTACAGGCTCCCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVLEKAG*YRLPLG
Trigger: GCCCAGAGGGAGCCTGTACCAGCCTGCCTTCTCCAG...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp GACAGATGTGCTAGTGGATGCTCGAGACTCAGGTTTGGAGACTGGTTGGCTCTTCTGTGTTTCCCCTCCTaGAGAAGGCAGGCTGGTACA +
Preference number: 4 (lower is better)
Translates to: DRCASGCSRLRFGDWLALLCFPS*RRQAGT
Trigger: TGTACCAGCCTGCCTTCTCCAGGAGGGGAAACACAG...AAGAGCCAACCAGTCTCCAAACCTGAGTCTCGAGCATCCACTAGCACATCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp AGGTTTGGCAGTGGCGGAAGACTCATCTTTCTGCGGGGAGAGTGGCTCTTCAGATTTCTGCGGGGAGAGTaGCTCTTCAGATACAGAAGG +
Preference number: 4 (lower is better)
Translates to: RFGSGGRLIFLRGEWLFRFLRGE*LFRYRR
Trigger: CCTTCTGTATCTGAAGAGCCACTCTCCCCGCAGAAA...TCTGAAGAGCCACTCTCCCCGCAGAAAGATGAGTCTTCCGCCACTGCCAAACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp ACAGTGGTGGTCTCCCGGAGGTGGGCAGACTTGTTGCTAGGAGATCTACAGTTTTCTCTCCCAGAGGTTTaGCAGTGGCGGAAGACTCAT +
Preference number: 4 (lower is better)
Translates to: TVVVSRRWADLLLGDLQFSLPEV*QWRKTH
Trigger: ATGAGTCTTCCGCCACTGCCAAACCTCTGGGAGAGA...AAACTGTAGATCTCCTAGCAACAAGTCTGCCCACCTCCGGGAGACCACCACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp CTCCTGGACTTCCCATGGCTCCAGAGACAATGCTCGCTGCAGCAGCCACAGCAGGTCAGTGGCAGTTTCTaGAAGTTTACTTGGGTTAAG +
Preference number: 4 (lower is better)
Translates to: LLDFPWLQRQCSLQQPQQVSGSF*KFTWVK
Trigger: CTTAACCCAAGTAAACTTCCAGAAACTGCCACTGAC...CTGCTGTGGCTGCTGCAGCGAGCATTGTCTCTGGAGCCATGGGAAGTCCAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTCAGCAAAGTTATGACTaGGAGCAGTCGGCTCATTTA +
Preference number: 4 (lower is better)
Translates to: CAGPHHRTDDATLGLASAQQSYD*EQSAHL
Trigger: TAAATGAGCCGACTGCTCCCAGTCATAACTTTGCTG...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTGGGCAAAGCCAAGGGTaGAGGGGGAGGGGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPGQSQG*RGRGRR
Trigger: CCGCCTCCCCCTCCCCCTCCACCCTTGGCTTTGCCC...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR CAA 72 bp GGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTaGGCTTCAGCTTCTAAAACCTGGGACTTCATTACA +
Preference number: 4 (lower is better)
Translates to: GPHHRTDDATLG*ASASKTWDFIT
Trigger: TGTAATGAAGTCCCAGGTTTTAGAAGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp TGCATAACCACTTTAACTCATTCCTCTCATTCTCCTTACACATCTGCATTTCCGCGGGCGCGGAGACAATaGCCCAGTGACCCGGTGACC +
Preference number: 4 (lower is better)
Translates to: CITTLTHSSHSPYTSAFPRARRQ*PSDPVT
Trigger: GGTCACCGGGTCACTGGGTCATTGTCTCCGCGCCCG...CGGAAATGCAGATGTGTAAGGAGAATGAGAGGAATGAGTTAAAGTGGTTATGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTCGGGCGCGGAGACAATaGCCCAGTGACCCGGTGACC +
Preference number: 4 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPRARRQ*PSDPVT
Trigger: GGTCACCGGGTCACTGGGTCATTGTCTCCGCGCCCG...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp AGGTTTGGCAGTGGCGGAAGACTCATCTTTCTGCGGGGAGAGTGGCTCTTCAGAGAGAGCATAGAGGCCTaGCTTTCCAGGGATTTTGAA +
Preference number: 4 (lower is better)
Translates to: RFGSGGRLIFLRGEWLFRESIEA*LSRDFE
Trigger: TTCAAAATCCCTGGAAAGTCAGGCCTCTATGCTCTC...TCTGAAGAGCCACTCTCCCCGCAGAAAGATGAGTCTTCCGCCACTGCCAAACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp GGCAGGCTGGTACAGGCTCCCTCTGGGCTCTCAGAAGAAAAGGACGTTTCAGAGCTCTACTGCAGTTTCTaGCTCCTTATGTTCTGTGTC +
Preference number: 4 (lower is better)
Translates to: GRLVQAPSGLSEEKDVSELYCSF*LLMFCV
Trigger: GACACAGAACATAAGGAGTCAGAAACTGCAGTAGAG...CTCTGAAACGTCCTTTTCTTCTGAGAGCCCAGAGGGAGCCTGTACCAGCCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp GTTCCTCCCGCCACTGACAGATGTGCTAGTGGATGCTCGAGACTCAGGTTTGGACCAATTTTGGAAAGCTaGATCTTGAGAGGGGGAACC +
Preference number: 4 (lower is better)
Translates to: VPPATDRCASGCSRLRFGPILES*ILRGGT
Trigger: GGTTCCCCCTCTCAAGATTCAGCTTTCCAAAATTGG...TCCAAACCTGAGTCTCGAGCATCCACTAGCACATCTGTCAGTGGCGGGAGGAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp GGGGTTCTTCATGAGAATTGGTTAGACTTTCAGCCTCCTCAGAAAATTCAGGTAGCCCTTCCTTTGAGCTaGGCGGAGGAGGCAACCGGG +
Preference number: 4 (lower is better)
Translates to: GVLHENWLDFQPPQKIQVALPLS*AEEATG
Trigger: CCCGGTTGCCTCCTCCGCTCAGCTCAAAGGAAGGGC...TACCTGAATTTTCTGAGGAGGCTGAAAGTCTAACCAATTCTCATGAAGAACCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp GCTAGTGGATGCTCGAGACTCAGGTTTGGAGACTGGTTGGCTCTTGATTATAAATGGAGGCCCTTCCTTTaGGCTGAGCGGAGGAGGCAA +
Preference number: 4 (lower is better)
Translates to: ASGCSRLRFGDWLALDYKWRPFL*AERRRQ
Trigger: TTGCCTCCTCCGCTCAGCTCAAAGGAAGGGCCTCCA...TTTATAATCAAGAGCCAACCAGTCTCCAAACCTGAGTCTCGAGCATCCACTAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTTGCACCTGCATTTTCTaGGCAGCTAATTGGGTAAAA +
Preference number: 4 (lower is better)
Translates to: CAGPHHRTDDATLGLASACTCIF*AANWVK
Trigger: TTTTACCCAATTAGCTGCTCAGAAAATGCAGGTGCA...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp TGCTCTTTGATGTGTGCCAGAGTTCTCGTCTTTCCACCCTCTCCTGGACTTCCCCATTTCCGGAAGGAATaGACGGAACCACTCCAATGC +
Preference number: 4 (lower is better)
Translates to: CSLMCARVLVFPPSPGLPHFRKE*TEPLQC
Trigger: GCATTGGAGTGGTTCCGTTCATTCCTTCCGGAAATG...GGGAAGTCCAGGAGAGGGTGGAAAGACGAGAACTCTGGCACACATCAAAGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp AGGGGGAACCCTTGGTTCCTCTCTGGGAGGCTGTTCTTTCTCAGGTGGGCTGCTATCTCGAGTGGAAGATaGTTCATCAGTTACCTGCTT +
Preference number: 4 (lower is better)
Translates to: RGNPWFLSGRLFFLRWAAISSGR*FISYLL
Trigger: AAGCAGGTAACTGATGAAGCATCTTCCACTCGAGAT...AGCAGCCCACCTGAGAAAGAACAGCCTCCCAGAGAGGAACCAAGGGTTCCCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp AGCGGAGGAGGCAACCGGGTCTCTTTAGAGGTCTGGAAGAGATGGGCTCGAGCTCTGTTTCCACCCTTGTaGTGCATATGCAAAGAATTC +
Preference number: 4 (lower is better)
Translates to: SGGGNRVSLEVWKRWARALFPPL*CICKEF
Trigger: GAATTCTTTGCATATGCAGCACAAGGGTGGAAACAG...AGCTCGAGCCCATCTCTTCCAGACCTCTAAAGAGACCCGGTTGCCTCCTCCGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp CTGGAGAAGGCAGGCTGGTACAGGCTCCCTCTGGGCTCTCAGAAGAAAAGGACGCTGTTTCCACCCTTGTaGTGCATATGCAAAGAATTC +
Preference number: 4 (lower is better)
Translates to: LEKAGWYRLPLGSQKKRTLFPPL*CICKEF
Trigger: GAATTCTTTGCATATGCAGCACAAGGGTGGAAACAG...CGTCCTTTTCTTCTGAGAGCCCAGAGGGAGCCTGTACCAGCCTGCCTTCTCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp TCCTGGACTTCCCATGGCTCCAGAGACAATGCTCGCTGCAGCAGCCACAGCAGCATTCCTCTCTTGACATaGCCAGCTTTTCTCCATAAA +
Preference number: 4 (lower is better)
Translates to: SWTSHGSRDNARCSSHSSIPLLT*PAFLHK
Trigger: TTTATGGAGAAAAGCTGGGCATGTCAAGAGAGGAAT...GCTGCTGTGGCTGCTGCAGCGAGCATTGTCTCTGGAGCCATGGGAAGTCCAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp GTTGTTCTGCCAAGGCTGTCTGTGCAGAAACTGGAAGGCCAGAAGTCCCACATGGAAGACTCATCTTTCTaGGGGGAGAGTGGCTCTTCA +
Preference number: 4 (lower is better)
Translates to: VVLPRLSVQKLEGQKSHMEDSSF*GESGSS
Trigger: TGAAGAGCCACTCTCCCCGCAGAAAGATGAGTCTTC...CATGTGGGACTTCTGGCCTTCCAGTTTCTGCACAGACAGCCTTGGCAGAACAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp AGGGGGAACCCTTGGTTCCTCTCTGGGAGGCTGTTCTTTCTCAGGTGGGCTGCTTTAGACAGATTCTTCTaGTGGGAGGTAAGGTTCTCT +
Preference number: 4 (lower is better)
Translates to: RGNPWFLSGRLFFLRWAALDRFF*WEVRFS
Trigger: AGAGAACCTTACCTCCCAGCAGAAGAATCTGTCTAA...AGCAGCCCACCTGAGAAAGAACAGCCTCCCAGAGAGGAACCAAGGGTTCCCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTATCTTCAGACGGAAATaGTTCAGGAGCAATGGAAGA +
Preference number: 4 (lower is better)
Translates to: CAGPHHRTDDATLGLASAIFRRK*FRSNGR
Trigger: TCTTCCATTGCTCCTGAAGCATTTCCGTCTGAAGAT...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTAGCCACAGCAGCAGCTaGAGCAGCCTCTCGCTGGGC +
Preference number: 4 (lower is better)
Translates to: FKKIWPTSARSEARMNGCSHSSS*SSLSLG
Trigger: GCCCAGCGAGAGGCTGCTGCAGCTGCTGCTGTGGCT...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp AGAAACCAGGCTCTGGAGAAGCTGGGCTTTTCATGCTTTTTGGCTGTTGTTCTGTGGCTCCAGAGACAATaGTCGCTGCAGCAGCCACAG +
Preference number: 4 (lower is better)
Translates to: RNQALEKLGFSCFLAVVLWLQRQ*SLQQPQ
Trigger: CTGTGGCTGCTGCAGCGAGCATTGTCTCTGGAGCCA...CAGAACAACAGCCAAAAAGCATGAAAAGCCCAGCTTCTCCAGAGCCTGGTTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp GAATATCCAAGGTCCAGCAGTCAACTAAACTTTCTATATAGCTCATCCCAGAAAGATGGAGCGAGGGGGTaGGGTGGAGTGGGTGGGGGC +
Preference number: 4 (lower is better)
Translates to: EYPRSSSQLNFLYSSSQKDGARG*GGVGGG
Trigger: GCCCCCACCCACTCCACCCCACCCCCTCGCTCCATC...TTTCTGGGATGAGCTATATAGAAAGTTTAGTTGACTGCTGGACCTTGGATATTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTTTTTTGGTGTGCTGCTaGAAGGAAGACACTAACTTG +
Preference number: 4 (lower is better)
Translates to: CAGPHHRTDDATLGLASAFLVCC*KEDTNL
Trigger: CAAGTTAGTGTCTTCCTTCCAGCAGCACACCAAAAA...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTTTATTTTGGGGGTACTaGTCTCTACTGCAGTTTCTG +
Preference number: 4 (lower is better)
Translates to: CAGPHHRTDDATLGLASALFWGY*SLLQFL
Trigger: CAGAAACTGCAGTAGAGACCAGTACCCCCAAAATAA...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp CTTTGTCTGCTCTTTGATGTGTGCCAGAGTTCTCGTCTTTCCACCCTCTCCTGGGGTACAGGCTCCCTCTaGGCTCTCAGAAGAAAAGGA +
Preference number: 4 (lower is better)
Translates to: LCLLFDVCQSSRLSTLSWGTGSL*ALRRKG
Trigger: TCCTTTTCTTCTGAGAGCCCAGAGGGAGCCTGTACC...CCAGGAGAGGGTGGAAAGACGAGAACTCTGGCACACATCAAAGAGCAGACAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTAAGGAAGTGGCAAACTaGATACAAAAGTGGTCTCAG +
Preference number: 4 (lower is better)
Translates to: CAGPHHRTDDATLGLASAKEVAN*IQKWSQ
Trigger: CTGAGACCACTTTTGTATCCAGTTTGCCACTTCCTT...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp TTACTTGGGTTAAGAGACTGCTGTAGTACAGTGGTGGTCTCCCGGAGGTGGGCATTTCTGCGGGGAGAGTaGCTCTTCAGATACAGAAGG +
Preference number: 4 (lower is better)
Translates to: LLGLRDCCSTVVVSRRWAFLRGE*LFRYRR
Trigger: CCTTCTGTATCTGAAGAGCCACTCTCCCCGCAGAAA...TGCCCACCTCCGGGAGACCACCACTGTACTACAGCAGTCTCTTAACCCAAGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp ACAGTGGTGGTCTCCCGGAGGTGGGCAGACTTGTTGCTAGGAGATCTACAGTTTCCAGAGGTTTGGCAGTaGCGGAAGACTCATCTTTCT +
Preference number: 4 (lower is better)
Translates to: TVVVSRRWADLLLGDLQFPEVWQ*RKTHLS
Trigger: AGAAAGATGAGTCTTCCGCCACTGCCAAACCTCTGG...AAACTGTAGATCTCCTAGCAACAAGTCTGCCCACCTCCGGGAGACCACCACTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp GGAAGTTTACTTGGGTTAAGAGACTGCTGTAGTACAGTGGTGGTCTCCCGGAGGTCCCATCAGGTGACTTaGAGGGCTCTGATGACTTGG +
Preference number: 4 (lower is better)
Translates to: GSLLGLRDCCSTVVVSRRSHQVT*RALMTW
Trigger: CCAAGTCATCAGAGCCCTCCAAGTCACCTGATGGGA...CCTCCGGGAGACCACCACTGTACTACAGCAGTCTCTTAACCCAAGTAAACTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTATATCTGCGAGGGTCCTaGCTCCTGTGTTCCTCCCGC +
Preference number: 4 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVYLRGS*LLCSSR
Trigger: GCGGGAGGAACACAGGAGCCAGGACCCTCGCAGATA...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp GCTAGTGGATGCTCGAGACTCAGGTTTGGAGACTGGTTGGCTCTTGATTATAAATGGGCCCGAGCTTGTTaGGCCCGGGCCTTGATATCT +
Preference number: 4 (lower is better)
Translates to: ASGCSRLRFGDWLALDYKWARAC*ARALIS
Trigger: AGATATCAAGGCCCGGGCCCAACAAGCTCGGGCCCA...TTTATAATCAAGAGCCAACCAGTCTCCAAACCTGAGTCTCGAGCATCCACTAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTGCAGCAGCCTCTCGCTaGGCCCGAGCTTGTTGGGCC +
Preference number: 4 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPAAASR*ARACWA
Trigger: GGCCCAACAAGCTCGGGCCCAGCGAGAGGCTGCTGC...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp GGATTGACAATAATGACACCAGTCGAACCTTCCATTTTTGTTTCAGGGGTAGAAGCAGCAGCCTCTCGCTaGGCCCGAGCTTGTTGGGCC +
Preference number: 4 (lower is better)
Translates to: GLTIMTPVEPSIFVSGVEAAASR*ARACWA
Trigger: GGCCCAACAAGCTCGGGCCCAGCGAGAGGCTGCTGC...TTCTACCCCTGAAACAAAAATGGAAGGTTCGACTGGTGTCATTATTGTCAATCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp TGCATAACCACTTTAACTCATTCCTCTCATTCTCCTTACACATCTGCATTTCCGGCAGCAGCCTCTCGCTaGGCCCGAGCTTGTTGGGCC +
Preference number: 4 (lower is better)
Translates to: CITTLTHSSHSPYTSAFPAAASR*ARACWA
Trigger: GGCCCAACAAGCTCGGGCCCAGCGAGAGGCTGCTGC...CGGAAATGCAGATGTGTAAGGAGAATGAGAGGAATGAGTTAAAGTGGTTATGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp GCAGTTTCTGGAAGTTTACTTGGGTTAAGAGACTGCTGTAGTACAGTGGTGGTCGCTGTAGTACAGTGGTaGTCTCCCGGAGGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: AVSGSLLGLRDCCSTVVVAVVQW*SPGGGQ
Trigger: CTGCCCACCTCCGGGAGACCACCACTGTACTACAGC...GACCACCACTGTACTACAGCAGTCTCTTAACCCAAGTAAACTTCCAGAAACTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTTATAATGGCTATGCATaGAGTGTCAGTTCCCTGGAT +
Preference number: 4 (lower is better)
Translates to: CAGPHHRTDDATLGLASAYNGYA*SVSSLD
Trigger: ATCCAGGGAACTGACACTCCATGCATAGCCATTATA...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTCATCACCTTCTTTCATaGGCATATTGGGGGATAACA +
Preference number: 4 (lower is better)
Translates to: CAGPHHRTDDATLGLASAHHLLS*AYWGIT
Trigger: TGTTATCCCCCAATATGCCCATGAAAGAAGGTGATG...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp GTTCTCGTCTTTCCACCCTCTCCTGGACTTCCCATGGCTCCAGAGACAATGCTCTGTGTTAGTAAGGCTTaGATCTCGAGTGGAAGATGC +
Preference number: 4 (lower is better)
Translates to: VLVFPPSPGLPMAPETMLCVSKA*ISSGRC
Trigger: GCATCTTCCACTCGAGATTCAAGCCTTACTAACACA...GAGCATTGTCTCTGGAGCCATGGGAAGTCCAGGAGAGGGTGGAAAGACGAGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp GGCTGGTACAGGCTCCCTCTGGGCTCTCAGAAGAAAAGGACGTTTCAGAGATGCCATGAAGAACTACTTTaGGCTCCAGCGTTGTTTGGT +
Preference number: 4 (lower is better)
Translates to: GWYRLPLGSQKKRTFQRCHEELL*APALFG
Trigger: ACCAAACAACGCTGGAGCTCAAAGTAGTTCTTCATG...GCATCTCTGAAACGTCCTTTTCTTCTGAGAGCCCAGAGGGAGCCTGTACCAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp GGCAGGCTGGTACAGGCTCCCTCTGGGCTCTCAGAAGAAAAGGACGTTTCAGAGTCTGTGTCACTGACATaGGTCATAGATGAAGTGGAA +
Preference number: 4 (lower is better)
Translates to: GRLVQAPSGLSEEKDVSESVSLT*VIDEVE
Trigger: TTCCACTTCATCTATGACTCATGTCAGTGACACAGA...CTCTGAAACGTCCTTTTCTTCTGAGAGCCCAGAGGGAGCCTGTACCAGCCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp CTCCTGGACTTCCCATGGCTCCAGAGACAATGCTCGCTGCAGCAGCCACAGCAGGACATCAAAGATGCATaGAAGTTTTCATCAGTGGAA +
Preference number: 4 (lower is better)
Translates to: LLDFPWLQRQCSLQQPQQDIKDA*KFSSVE
Trigger: TTCCACTGATGAAAACTTTCATGCATCTTTGATGTC...CTGCTGTGGCTGCTGCAGCGAGCATTGTCTCTGGAGCCATGGGAAGTCCAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp CCTTCCTTTGAGCTGAGCGGAGGAGGCAACCGGGTCTCTTTAGAGGTCTGGAAGATTTCTAGAGCCTTCTaGAAATGGAGCCTTATCCAC +
Preference number: 4 (lower is better)
Translates to: PSFELSGGGNRVSLEVWKISRAF*KWSLIH
Trigger: GTGGATAAGGCTCCATTTTCAGAAGGCTCTAGAAAT...CTTCCAGACCTCTAAAGAGACCCGGTTGCCTCCTCCGCTCAGCTCAAAGGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp AGGTTTGGCAGTGGCGGAAGACTCATCTTTCTGCGGGGAGAGTGGCTCTTCAGAATGTTCCGGGTTGACTaGTCATCTTCTATCCTAGCT +
Preference number: 4 (lower is better)
Translates to: RFGSGGRLIFLRGEWLFRMFRVD*SSSILA
Trigger: AGCTAGGATAGAAGATGATCAGTCAACCCGGAACAT...TCTGAAGAGCCACTCTCCCCGCAGAAAGATGAGTCTTCCGCCACTGCCAAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp TGCATAACCACTTTAACTCATTCCTCTCATTCTCCTTACACATCTGCATTTCCGGCCCTTCCTTTGAGCTaGGCGGAGGAGGCAACCGGG +
Preference number: 4 (lower is better)
Translates to: CITTLTHSSHSPYTSAFPALPLS*AEEATG
Trigger: CCCGGTTGCCTCCTCCGCTCAGCTCAAAGGAAGGGC...CGGAAATGCAGATGTGTAAGGAGAATGAGAGGAATGAGTTAAAGTGGTTATGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp GGCAGGCTGGTACAGGCTCCCTCTGGGCTCTCAGAAGAAAAGGACGTTTCAGAGCAACACGAAAGCAGCTaGGGCTCTAATATAATCATC +
Preference number: 4 (lower is better)
Translates to: GRLVQAPSGLSEEKDVSEQHESS*GSNIII
Trigger: GATGATTATATTAGAGCCTCAGCTGCTTTCGTGTTG...CTCTGAAACGTCCTTTTCTTCTGAGAGCCCAGAGGGAGCCTGTACCAGCCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTGCTTCATCAGTTACCTaGTTCGAACAAACTCCATTT +
Preference number: 4 (lower is better)
Translates to: CAGPHHRTDDATLGLASAASSVT*FEQTPF
Trigger: AAATGGAGTTTGTTCGAAGCAGGTAACTGATGAAGC...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp CTCCTGGACTTCCCATGGCTCCAGAGACAATGCTCGCTGCAGCAGCCACAGCAGCCAGTGGGAGATTTTTaGCCATGTTTCATTTCTTTA +
Preference number: 4 (lower is better)
Translates to: LLDFPWLQRQCSLQQPQQPVGDF*PCFISL
Trigger: TAAAGAAATGAAACATGGGCAAAAATCTCCCACTGG...CTGCTGTGGCTGCTGCAGCGAGCATTGTCTCTGGAGCCATGGGAAGTCCAGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000592288.6
ENST00000593195.6
CDS-3UTR GCA 90 bp GTTCCTCCCGCCACTGACAGATGTGCTAGTGGATGCTCGAGACTCAGGTTTGGATGCCTTATCCGCAACTaGATTTCTGGGGTAAACTCT +
Preference number: 4 (lower is better)
Translates to: VPPATDRCASGCSRLRFGCLIRN*ISGVNS
Trigger: AGAGTTTACCCCAGAAATGCAGTTGCGGATAAGGCA...TCCAAACCTGAGTCTCGAGCATCCACTAGCACATCTGTCAGTGGCGGGAGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp GGAAGGAATGAACGGAACCACTCCAATGCAATCCCAGCCACTCCTGCTAGTTCAGAAGACTCATCTTTCTaGGGGGAGAGTGGCTCTTCA +
Preference number: 4 (lower is better)
Translates to: GRNERNHSNAIPATPASSEDSSF*GESGSS
Trigger: TGAAGAGCCACTCTCCCCGCAGAAAGATGAGTCTTC...TGAACTAGCAGGAGTGGCTGGGATTGCATTGGAGTGGTTCCGTTCATTCCTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp GTTCCTCCCGCCACTGACAGATGTGCTAGTGGATGCTCGAGACTCAGGTTTGGAAGCTTAGCCTTTGTCTaGTCTTTGATGTGTGCCAGA +
Preference number: 4 (lower is better)
Translates to: VPPATDRCASGCSRLRFGSLAFV*SLMCAR
Trigger: TCTGGCACACATCAAAGAGCAGACAAAGGCTAAGCT...TCCAAACCTGAGTCTCGAGCATCCACTAGCACATCTGTCAGTGGCGGGAGGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp TTACTTGGGTTAAGAGACTGCTGTAGTACAGTGGTGGTCTCCCGGAGGTGGGCAAGGCTCTGGAGAAGCTaGGCTTTTCATGCTTTTTGG +
Preference number: 4 (lower is better)
Translates to: LLGLRDCCSTVVVSRRWARLWRS*AFHAFW
Trigger: CCAAAAAGCATGAAAAGCCCAGCTTCTCCAGAGCCT...TGCCCACCTCCGGGAGACCACCACTGTACTACAGCAGTCTCTTAACCCAAGTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp GGCAGGCTGGTACAGGCTCCCTCTGGGCTCTCAGAAGAAAAGGACGTTTCAGAGAGGGCTCTGATGACTTaGAAGTATGTGAGGTTTCTA +
Preference number: 4 (lower is better)
Translates to: GRLVQAPSGLSEEKDVSERALMT*KYVRFL
Trigger: TAGAAACCTCACATACTTCCAAGTCATCAGAGCCCT...CTCTGAAACGTCCTTTTCTTCTGAGAGCCCAGAGGGAGCCTGTACCAGCCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp CTCCTGGACTTCCCATGGCTCCAGAGACAATGCTCGCTGCAGCAGCCACAGCAGCTTGATTATAAAAGGTaGCCCAATTTTGGAAAGCTG +
Preference number: 4 (lower is better)
Translates to: LLDFPWLQRQCSLQQPQQLDYKR*PNFGKL
Trigger: CAGCTTTCCAAAATTGGGCCACCTTTTATAATCAAG...CTGCTGTGGCTGCTGCAGCGAGCATTGTCTCTGGAGCCATGGGAAGTCCAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp GATGACTTGGAAGTATGTGAGGTTTCTAACCGACTCTGTGTACTCCCTTGCTTATGGGCCCGAGCTTGTTaGGCCCGGGCCTTGATATCT +
Preference number: 4 (lower is better)
Translates to: DDLEVCEVSNRLCVLPCLWARAC*ARALIS
Trigger: AGATATCAAGGCCCGGGCCCAACAAGCTCGGGCCCA...TAAGCAAGGGAGTACACAGAGTCGGTTAGAAACCTCACATACTTCCAAGTCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp CGGAGGTGGGCAGACTTGTTGCTAGGAGATCTACAGTTTGGATTGACAATAATGACTGCTGTAGTACAGTaGTGGTCTCCCGGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: RRWADLLLGDLQFGLTIMTAVVQ*WSPGGG
Trigger: CCCACCTCCGGGAGACCACCACTGTACTACAGCAGT...CATTATTGTCAATCCAAACTGTAGATCTCCTAGCAACAAGTCTGCCCACCTCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp CCTTCCTTTGAGCTGAGCGGAGGAGGCAACCGGGTCTCTTTAGAGGTCTGGAAGGTCAGTGGCAGTTTCTaGAAGTTTACTTGGGTTAAG +
Preference number: 4 (lower is better)
Translates to: PSFELSGGGNRVSLEVWKVSGSF*KFTWVK
Trigger: CTTAACCCAAGTAAACTTCCAGAAACTGCCACTGAC...CTTCCAGACCTCTAAAGAGACCCGGTTGCCTCCTCCGCTCAGCTCAAAGGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTCAATTCTGTTCTGCATaGAGTGCTTGTTTAGCCATT +
Preference number: 4 (lower is better)
Translates to: CAGPHHRTDDATLGLASAQFCSA*SACLAI
Trigger: AATGGCTAAACAAGCACTCCATGCAGAACAGAATTG...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTGAGACAATGACCCAGTaGCCCGGTGACCCGCACTCG +
Preference number: 4 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPETMTQ*PGDPHS
Trigger: CGAGTGCGGGTCACCGGGTCACTGGGTCATTGTCTC...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp GTTCCTCCCGCCACTGACAGATGTGCTAGTGGATGCTCGAGACTCAGGTTTGGAACTTTCCAGGGATTTTaGAGAATGTTCCATCCCCTA +
Preference number: 4 (lower is better)
Translates to: VPPATDRCASGCSRLRFGTFQGF*RMFHPL
Trigger: TAGGGGATGGAACATTCTTCAAAATCCCTGGAAAGT...TCCAAACCTGAGTCTCGAGCATCCACTAGCACATCTGTCAGTGGCGGGAGGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp AGGTTTGGCAGTGGCGGAAGACTCATCTTTCTGCGGGGAGAGTGGCTCTTCAGAACTTTCCAGGGATTTTaGAGAATGTTCCATCCCCTA +
Preference number: 4 (lower is better)
Translates to: RFGSGGRLIFLRGEWLFRTFQGF*RMFHPL
Trigger: TAGGGGATGGAACATTCTTCAAAATCCCTGGAAAGT...TCTGAAGAGCCACTCTCCCCGCAGAAAGATGAGTCTTCCGCCACTGCCAAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp TTACTTGGGTTAAGAGACTGCTGTAGTACAGTGGTGGTCTCCCGGAGGTGGGCATGTGTTAGTAAGGCTTaGATCTCGAGTGGAAGATGC +
Preference number: 4 (lower is better)
Translates to: LLGLRDCCSTVVVSRRWACVSKA*ISSGRC
Trigger: GCATCTTCCACTCGAGATTCAAGCCTTACTAACACA...TGCCCACCTCCGGGAGACCACCACTGTACTACAGCAGTCTCTTAACCCAAGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp AGGTTTGGCAGTGGCGGAAGACTCATCTTTCTGCGGGGAGAGTGGCTCTTCAGATCTGCAATTTCCTCCTaGATTACAGATTCTTCAGGG +
Preference number: 4 (lower is better)
Translates to: RFGSGGRLIFLRGEWLFRSAISS*ITDSSG
Trigger: CCCTGAAGAATCTGTAATTCAGGAGGAAATTGCAGA...TCTGAAGAGCCACTCTCCCCGCAGAAAGATGAGTCTTCCGCCACTGCCAAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTTCAGGTATTGTCTTATaGTTTTCATCCTGGCATTCA +
Preference number: 4 (lower is better)
Translates to: CAGPHHRTDDATLGLASASGIVL*FSSWHS
Trigger: TGAATGCCAGGATGAAAATCATAAGACAATACCTGA...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp GGCAGGCTGGTACAGGCTCCCTCTGGGCTCTCAGAAGAAAAGGACGTTTCAGAGGACATGAGTCATAGATaGAGTGGAAGGAATAAGAGA +
Preference number: 4 (lower is better)
Translates to: GRLVQAPSGLSEEKDVSEDMSHR*SGRNKR
Trigger: TCTCTTATTCCTTCCACTTCATCTATGACTCATGTC...CTCTGAAACGTCCTTTTCTTCTGAGAGCCCAGAGGGAGCCTGTACCAGCCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp TGCTCTTTGATGTGTGCCAGAGTTCTCGTCTTTCCACCCTCTCCTGGACTTCCCGATTTACAGGTTTGCTaGCTCAGGGTCTTATTGTGC +
Preference number: 4 (lower is better)
Translates to: CSLMCARVLVFPPSPGLPDLQVC*LRVLLC
Trigger: GCACAATAAGACCCTGAGTCAGCAAACCTGTAAATC...GGGAAGTCCAGGAGAGGGTGGAAAGACGAGAACTCTGGCACACATCAAAGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp AGCACAGAAACCAGGCTCTGGAGAAGCTGGGCTTTTCATGCTTTTTGGCTGTTGAGCAAGTTCTGGAATTaGAGCAGGGTAGGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: STETRLWRSWAFHAFWLLSKFWN*SRVGLL
Trigger: GAGAAGCCCTACCCTGCTTCAATTCCAGAACTTGCT...CAACAGCCAAAAAGCATGAAAAGCCCAGCTTCTCCAGAGCCTGGTTTCTGTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp AGCACAGAAACCAGGCTCTGGAGAAGCTGGGCTTTTCATGCTTTTTGGCTGTTGTGGAAAGCTGAATCTTaGGAGGGGGAACCCTTGGTT +
Preference number: 4 (lower is better)
Translates to: STETRLWRSWAFHAFWLLWKAES*EGEPLV
Trigger: AACCAAGGGTTCCCCCTCTCAAGATTCAGCTTTCCA...CAACAGCCAAAAAGCATGAAAAGCCCAGCTTCTCCAGAGCCTGGTTTCTGTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACATGGAGGCCCTTCCTTTaGGCTGAGCGGAGGAGGCAA +
Preference number: 4 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTWRPFL*AERRRQ
Trigger: TTGCCTCCTCCGCTCAGCTCAAAGGAAGGGCCTCCA...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp GAATATCCAAGGTCCAGCAGTCAACTAAACTTTCTATATAGCTCATCCCAGAAAGGACAGACGACAGCCTaGGCTCCCTGCACCAGGGAC +
Preference number: 4 (lower is better)
Translates to: EYPRSSSQLNFLYSSSQKGQTTA*APCTRD
Trigger: GTCCCTGGTGCAGGGAGCTCAGGCTGTCGTCTGTCC...TTTCTGGGATGAGCTATATAGAAAGTTTAGTTGACTGCTGGACCTTGGATATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTAAACGCAGATGGACAGTaGCTCTGGGCTCTGCATGCT +
Preference number: 4 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVNADGQ*LWALHA
Trigger: AGCATGCAGAGCCCAGAGTCACTGTCCATCTGCGTT...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp GTTCTCGTCTTTCCACCCTCTCCTGGACTTCCCATGGCTCCAGAGACAATGCTCCTTCTTTTCTGCTGCTaGCTCAAAGCCTGTTTAAGA +
Preference number: 4 (lower is better)
Translates to: VLVFPPSPGLPMAPETMLLLFCC*LKACLR
Trigger: TCTTAAACAGGCTTTGAGGCAGCAGCAGAAAAGAAG...GAGCATTGTCTCTGGAGCCATGGGAAGTCCAGGAGAGGGTGGAAAGACGAGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp GTTCTCGTCTTTCCACCCTCTCCTGGACTTCCCATGGCTCCAGAGACAATGCTCCTGTTTCCACCCTTGTaGTGCATATGCAAAGAATTC +
Preference number: 4 (lower is better)
Translates to: VLVFPPSPGLPMAPETMLLFPPL*CICKEF
Trigger: GAATTCTTTGCATATGCAGCACAAGGGTGGAAACAG...GAGCATTGTCTCTGGAGCCATGGGAAGTCCAGGAGAGGGTGGAAAGACGAGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp CTTTGTCTGCTCTTTGATGTGTGCCAGAGTTCTCGTCTTTCCACCCTCTCCTGGTTTTGGCTGTTGTTCTaGCAAGGCTGTCTGTGCAGA +
Preference number: 4 (lower is better)
Translates to: LCLLFDVCQSSRLSTLSWFWLLF*QGCLCR
Trigger: TCTGCACAGACAGCCTTGGCAGAACAACAGCCAAAA...CCAGGAGAGGGTGGAAAGACGAGAACTCTGGCACACATCAAAGAGCAGACAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp GTTCCTCCCGCCACTGACAGATGTGCTAGTGGATGCTCGAGACTCAGGTTTGGAATCTTCAGACGGAAATaGTTCAGGAGCAATGGAAGA +
Preference number: 4 (lower is better)
Translates to: VPPATDRCASGCSRLRFGIFRRK*FRSNGR
Trigger: TCTTCCATTGCTCCTGAAGCATTTCCGTCTGAAGAT...TCCAAACCTGAGTCTCGAGCATCCACTAGCACATCTGTCAGTGGCGGGAGGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp ATTGACAATAATGACACCAGTCGAACCTTCCATTTTTGTTTCAGGGGTAGAAGAAGCCACAGCAGCAGCTaGAGCAGCCTCTCGCTGGGC +
Preference number: 4 (lower is better)
Translates to: IDNNDTSRTFHFCFRGRRSHSSS*SSLSLG
Trigger: GCCCAGCGAGAGGCTGCTGCAGCTGCTGCTGTGGCT...TCTTCTACCCCTGAAACAAAAATGGAAGGTTCGACTGGTGTCATTATTGTCAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp GGAAGTTTACTTGGGTTAAGAGACTGCTGTAGTACAGTGGTGGTCTCCCGGAGGCTGCTCTTTGATGTGTaGCAGAGTTCTCGTCTTTCC +
Preference number: 4 (lower is better)
Translates to: GSLLGLRDCCSTVVVSRRLLFDV*QSSRLS
Trigger: GGAAAGACGAGAACTCTGGCACACATCAAAGAGCAG...CCTCCGGGAGACCACCACTGTACTACAGCAGTCTCTTAACCCAAGTAAACTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTAGTTTATGGCTGCTGGTaGAAAGCCCCCTGGTGGTTG +
Preference number: 4 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVVYGCW*KAPWWL
Trigger: CAACCACCAGGGGGCTTTGCACCAGCAGCCATAAAC...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTCTGTCCTCACTGGTCTaGCCTGCAGGTCCAAGCTGG +
Preference number: 4 (lower is better)
Translates to: FKKIWPTSARSEARMNGCLSSLV*PAGPSW
Trigger: CCAGCTTGGACCTGCAGGGCAGACCAGTGAGGACAG...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTAAGTGACTCTGGGCTCTaGATGCTCAGGGGGTCATTC +
Preference number: 4 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVSDSGL*MLRGSF
Trigger: GAATGACCCCCTGAGCATGCAGAGCCCAGAGTCACT...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp GGAAGGAATGAACGGAACCACTCCAATGCAATCCCAGCCACTCCTGCTAGTTCACCATTTTCTTCTCCATaGGCATTTGCCTCGGCCATA +
Preference number: 4 (lower is better)
Translates to: GRNERNHSNAIPATPASSPFSSP*AFASAI
Trigger: TATGGCCGAGGCAAATGCCCATGGAGAAGAAAATGG...TGAACTAGCAGGAGTGGCTGGGATTGCATTGGAGTGGTTCCGTTCATTCCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTCTGGAGAAGGCAGGCTaGTACAGGCTCCCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPLEKAG*YRLPLG
Trigger: GCCCAGAGGGAGCCTGTACCAGCCTGCCTTCTCCAG...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp ACTTCCCATCTGCCTATCCACTTCTGGGAGCAAAAGCAGGAGGTATTGTTGAAACTGTGTTTCCCCTCCTaGAGAAGGCAGGCTGGTACA +
Preference number: 4 (lower is better)
Translates to: TSHLPIHFWEQKQEVLLKLCFPS*RRQAGT
Trigger: TGTACCAGCCTGCCTTCTCCAGGAGGGGAAACACAG...TTTCAACAATACCTCCTGCTTTTGCTCCCAGAAGTGGATAGGCAGATGGGAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593195.6
CDS-3UTR CCA 90 bp AGGTTTGGCAGTGGCGGAAGACTCATCTTTCTGCGGGGAGAGTGGCTCTTCAGAAAGGAAGTGGCAAACTaGATACAAAAGTGGTCTCAG +
Preference number: 4 (lower is better)
Translates to: RFGSGGRLIFLRGEWLFRKEVAN*IQKWSQ
Trigger: CTGAGACCACTTTTGTATCCAGTTTGCCACTTCCTT...TCTGAAGAGCCACTCTCCCCGCAGAAAGATGAGTCTTCCGCCACTGCCAAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp GGCTGGTACAGGCTCCCTCTGGGCTCTCAGAAGAAAAGGACGTTTCAGAGATGCAAGGAAGTGGCAAACTaGATACAAAAGTGGTCTCAG +
Preference number: 4 (lower is better)
Translates to: GWYRLPLGSQKKRTFQRCKEVAN*IQKWSQ
Trigger: CTGAGACCACTTTTGTATCCAGTTTGCCACTTCCTT...GCATCTCTGAAACGTCCTTTTCTTCTGAGAGCCCAGAGGGAGCCTGTACCAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp CCTTCCTTTGAGCTGAGCGGAGGAGGCAACCGGGTCTCTTTAGAGGTCTGGAAGCTCAGGTTTGGAGACTaGTTGGCTCTTGATTATAAA +
Preference number: 4 (lower is better)
Translates to: PSFELSGGGNRVSLEVWKLRFGD*LALDYK
Trigger: TTTATAATCAAGAGCCAACCAGTCTCCAAACCTGAG...CTTCCAGACCTCTAAAGAGACCCGGTTGCCTCCTCCGCTCAGCTCAAAGGAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp GGGGTTCTTCATGAGAATTGGTTAGACTTTCAGCCTCCTCAGAAAATTCAGGTATGGGCCCGAGCTTGTTaGGCCCGGGCCTTGATATCT +
Preference number: 4 (lower is better)
Translates to: GVLHENWLDFQPPQKIQVWARAC*ARALIS
Trigger: AGATATCAAGGCCCGGGCCCAACAAGCTCGGGCCCA...TACCTGAATTTTCTGAGGAGGCTGAAAGTCTAACCAATTCTCATGAAGAACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTAGGAGATCTACAGTTTaGATTGACAATAATGACACC +
Preference number: 4 (lower is better)
Translates to: CAGPHHRTDDATLGLASARRSTV*IDNNDT
Trigger: GGTGTCATTATTGTCAATCCAAACTGTAGATCTCCT...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp AACAAAATGTTGTCTCAAGGGAGGCTGGAGTACATGATTCTTCTGATGTGGACTGCTGTAGTACAGTGGTaGTCTCCCGGAGGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: NKMLSQGRLEYMILLMWTAVVQW*SPGGGQ
Trigger: CTGCCCACCTCCGGGAGACCACCACTGTACTACAGC...AGTCCACATCAGAAGAATCATGTACTCCAGCCTCCCTTGAGACAACATTTTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp TCTCTGAATCTCTACTTTCATTTCTTATCCCATCAGGTGACTTGGAGGGCTCTGACTGCTGTAGTACAGTaGTGGTCTCCCGGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: SLNLYFHFLSHQVTWRALTAVVQ*WSPGGG
Trigger: CCCACCTCCGGGAGACCACCACTGTACTACAGCAGT...CAGAGCCCTCCAAGTCACCTGATGGGATAAGAAATGAAAGTAGAGATTCAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp GTTCTCGTCTTTCCACCCTCTCCTGGACTTCCCATGGCTCCAGAGACAATGCTCGTCAGTGGCAGTTTCTaGAAGTTTACTTGGGTTAAG +
Preference number: 4 (lower is better)
Translates to: VLVFPPSPGLPMAPETMLVSGSF*KFTWVK
Trigger: CTTAACCCAAGTAAACTTCCAGAAACTGCCACTGAC...GAGCATTGTCTCTGGAGCCATGGGAAGTCCAGGAGAGGGTGGAAAGACGAGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTAGGGCTGCTCTCACAGTaGTACCCATGGATACAGTGG +
Preference number: 4 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVGLLSQ*YPWIQW
Trigger: CCACTGTATCCATGGGTACCACTGTGAGAGCAGCCC...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp ACAGTGGTGGTCTCCCGGAGGTGGGCAGACTTGTTGCTAGGAGATCTACAGTTTTTAGAGCTGAAGTACTaGGGCGTAAAATTCCATCAC +
Preference number: 4 (lower is better)
Translates to: TVVVSRRWADLLLGDLQFLELKY*GVKFHH
Trigger: GTGATGGAATTTTACGCCTCAGTACTTCAGCTCTAA...AAACTGTAGATCTCCTAGCAACAAGTCTGCCCACCTCCGGGAGACCACCACTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp GCCAGAGTTCTCGTCTTTCCACCCTCTCCTGGACTTCCCATGGCTCCAGAGACATCACAGACTTCTAACTaGTCGATAACAACTGTCATT +
Preference number: 4 (lower is better)
Translates to: ARVLVFPPSPGLPMAPETSQTSN*SITTVI
Trigger: AATGACAGTTGTTATCGATCAGTTAGAAGTCTGTGA...TGTCTCTGGAGCCATGGGAAGTCCAGGAGAGGGTGGAAAGACGAGAACTCTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp TTACTTGGGTTAAGAGACTGCTGTAGTACAGTGGTGGTCTCCCGGAGGTGGGCACTCAGTGTCAACATGTaGTTTACAGGTTTGCTGACT +
Preference number: 4 (lower is better)
Translates to: LLGLRDCCSTVVVSRRWALSVNM*FTGLLT
Trigger: AGTCAGCAAACCTGTAAATCACATGTTGACACTGAG...TGCCCACCTCCGGGAGACCACCACTGTACTACAGCAGTCTCTTAACCCAAGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp GACAGATGTGCTAGTGGATGCTCGAGACTCAGGTTTGGAGACTGGTTGGCTCTTATGTTCCGGGTTGACTaGTCATCTTCTATCCTAGCT +
Preference number: 4 (lower is better)
Translates to: DRCASGCSRLRFGDWLALMFRVD*SSSILA
Trigger: AGCTAGGATAGAAGATGATCAGTCAACCCGGAACAT...AAGAGCCAACCAGTCTCCAAACCTGAGTCTCGAGCATCCACTAGCACATCTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp CCATCAGGTGACTTGGAGGGCTCTGATGACTTGGAAGTATGTGAGGTTTCTAACCCTTTGTCTGCTCTTTaGTGTGTGCCAGAGTTCTCG +
Preference number: 4 (lower is better)
Translates to: PSGDLEGSDDLEVCEVSNPLSAL*CVPEFS
Trigger: CGAGAACTCTGGCACACATCAAAGAGCAGACAAAGG...GTTAGAAACCTCACATACTTCCAAGTCATCAGAGCCCTCCAAGTCACCTGATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp GGCGAATCCGACTGCTCATCAGACACCTTTAATGGTGTCAAAACAACACGAGGACCTTTGTCTGCTCTTTaGTGTGTGCCAGAGTTCTCG +
Preference number: 4 (lower is better)
Translates to: GESDCSSDTFNGVKTTRGPLSAL*CVPEFS
Trigger: CGAGAACTCTGGCACACATCAAAGAGCAGACAAAGG...TCCTCGTGTTGTTTTGACACCATTAAAGGTGTCTGATGAGCAGTCGGATTCGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTACCCACTGAGGTAGTTTaGAGAGGCAATGGAAGCCTG +
Preference number: 4 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVPTEVV*RGNGSL
Trigger: CAGGCTTCCATTGCCTCTTCAAACTACCTCAGTGGG...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTACATATCAGGTTTCCATaGAGCAGGGGAAGGAGGGGA +
Preference number: 4 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVHIRFP*SRGRRG
Trigger: TCCCCTCCTTCCCCTGCTTCATGGAAACCTGATATG...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp TTACTTGGGTTAAGAGACTGCTGTAGTACAGTGGTGGTCTCCCGGAGGTGGGCAATCTCGAGTGGAAGATaGTTCATCAGTTACCTGCTT +
Preference number: 4 (lower is better)
Translates to: LLGLRDCCSTVVVSRRWAISSGR*FISYLL
Trigger: AAGCAGGTAACTGATGAAGCATCTTCCACTCGAGAT...TGCCCACCTCCGGGAGACCACCACTGTACTACAGCAGTCTCTTAACCCAAGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp TACAGTGGTGGTCTCCCGGAGGTGGGCAGACTTGTTGCTAGGAGATCTACAGTTGACACTAACTTGCTTTaGACTGCTGTGTTAGTAAGG +
Preference number: 4 (lower is better)
Translates to: YSGGLPEVGRLVARRSTVDTNLL*TAVLVR
Trigger: CCTTACTAACACAGCAGTGCAAAGCAAGTTAGTGTC...AACTGTAGATCTCCTAGCAACAAGTCTGCCCACCTCCGGGAGACCACCACTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp TGCTGCTGCCTCAAAGCCTGTTTAAGAGCCTTTTTGGTGTGCTGCTGGAAGGAAGCCTTTTTGGTGTGCTaGTGGAAGGAAGACACTAAC +
Preference number: 4 (lower is better)
Translates to: CCCLKACLRAFLVCCWKEAFLVC*WKEDTN
Trigger: GTTAGTGTCTTCCTTCCAGCAGCACACCAAAAAGGC...TTCCTTCCAGCAGCACACCAAAAAGGCTCTTAAACAGGCTTTGAGGCAGCAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp TATGATGGGTTCGGGAGTATTAGACAGATTCTTCTGCTGGGAGGTAAGGTTCTCGGTAAACTCTCCTTCTaGCAGTCGCTGTTTCCACCC +
Preference number: 4 (lower is better)
Translates to: YDGFGSIRQILLLGGKVLGKLSF*QSLFPP
Trigger: GGGTGGAAACAGCGACTGGCAGAAGGAGAGTTTACC...GAGAACCTTACCTCCCAGCAGAAGAATCTGTCTAATACTCCCGAACCCATCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACAAGAGACAATGCTCGCTaGAGCAGCCACAGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTRDNAR*SSHSSS
Trigger: GCTGCTGCTGTGGCTGCTGCAGCGAGCATTGTCTCT...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTAGAGACAATGCTCGCTaGAGCAGCCACAGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: FKKIWPTSARSEARMNGCRDNAR*SSHSSS
Trigger: GCTGCTGCTGTGGCTGCTGCAGCGAGCATTGTCTCT...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp AACAAAATGTTGTCTCAAGGGAGGCTGGAGTACATGATTCTTCTGATGTGGACTTGGCTCCAGAGACAATaGTCGCTGCAGCAGCCACAG +
Preference number: 4 (lower is better)
Translates to: NKMLSQGRLEYMILLMWTWLQRQ*SLQQPQ
Trigger: CTGTGGCTGCTGCAGCGAGCATTGTCTCTGGAGCCA...AGTCCACATCAGAAGAATCATGTACTCCAGCCTCCCTTGAGACAACATTTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp GGCAGGCTGGTACAGGCTCCCTCTGGGCTCTCAGAAGAAAAGGACGTTTCAGAGTTTTCATCAGAACTATaGACAGATAAGTCAGTGGCA +
Preference number: 4 (lower is better)
Translates to: GRLVQAPSGLSEEKDVSEFSSEL*TDKSVA
Trigger: TGCCACTGACTTATCTGTGCATAGTTCTGATGAAAA...CTCTGAAACGTCCTTTTCTTCTGAGAGCCCAGAGGGAGCCTGTACCAGCCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACACTCACTGGTCTGCCCTaGAGGTCCAAGCTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTLTGLP*RSKLAS
Trigger: AGAAGCCAGCTTGGACCTGCAGGGCAGACCAGTGAG...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTCACGGGCTGTACGGATaGCTCTGTCCTCACTGGTCT +
Preference number: 4 (lower is better)
Translates to: FKKIWPTSARSEARMNGCHGLYG*LCPHWS
Trigger: AGACCAGTGAGGACAGAGGCATCCGTACAGCCCGTG...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACAACTCTGGGCTCTGCATaGTCAGGGGGTCATTCCCAC +
Preference number: 4 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTTLGSA*SGGHSH
Trigger: GTGGGAATGACCCCCTGAGCATGCAGAGCCCAGAGT...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp TTACTTGGGTTAAGAGACTGCTGTAGTACAGTGGTGGTCTCCCGGAGGTGGGCATTTTTGGTGTGCTGCTaGAAGGAAGACACTAACTTG +
Preference number: 4 (lower is better)
Translates to: LLGLRDCCSTVVVSRRWAFLVCC*KEDTNL
Trigger: CAAGTTAGTGTCTTCCTTCCAGCAGCACACCAAAAA...TGCCCACCTCCGGGAGACCACCACTGTACTACAGCAGTCTCTTAACCCAAGTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp AGAAACCAGGCTCTGGAGAAGCTGGGCTTTTCATGCTTTTTGGCTGTTGTTCTGCTGCCTATCCACTTCTaGGAGCAAAAGCAGGAGGTA +
Preference number: 4 (lower is better)
Translates to: RNQALEKLGFSCFLAVVLLPIHF*EQKQEV
Trigger: TACCTCCTGCTTTTGCTCCCAGAAGTGGATAGGCAG...CAGAACAACAGCCAAAAAGCATGAAAAGCCCAGCTTCTCCAGAGCCTGGTTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000592288.6
ENST00000593195.6
CDS-3UTR CCA 90 bp CCATCAGGTGACTTGGAGGGCTCTGATGACTTGGAAGTATGTGAGGTTTCTAACGACAGATTCTTCTGCTaGGAGGTAAGGTTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: PSGDLEGSDDLEVCEVSNDRFFC*EVRFSP
Trigger: GGGAGAGAACCTTACCTCCCAGCAGAAGAATCTGTC...GTTAGAAACCTCACATACTTCCAAGTCATCAGAGCCCTCCAAGTCACCTGATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp ACAATGAAGGAACTGATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCGAGAGGGGGAACCCTTaGTTCCTCTCTGGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: TMKELIMSSVSHQPQLYLERGNP*FLSGRL
Trigger: CAGCCTCCCAGAGAGGAACCAAGGGTTCCCCCTCTC...GAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTATCAGTTCCTTCATTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp CCTTCCTTTGAGCTGAGCGGAGGAGGCAACCGGGTCTCTTTAGAGGTCTGGAAGCTTGATTATAAAAGGTaGCCCAATTTTGGAAAGCTG +
Preference number: 4 (lower is better)
Translates to: PSFELSGGGNRVSLEVWKLDYKR*PNFGKL
Trigger: CAGCTTTCCAAAATTGGGCCACCTTTTATAATCAAG...CTTCCAGACCTCTAAAGAGACCCGGTTGCCTCCTCCGCTCAGCTCAAAGGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp TGCATAACCACTTTAACTCATTCCTCTCATTCTCCTTACACATCTGCATTTCCGTATCTGCGAGGGTCCTaGCTCCTGTGTTCCTCCCGC +
Preference number: 4 (lower is better)
Translates to: CITTLTHSSHSPYTSAFPYLRGS*LLCSSR
Trigger: GCGGGAGGAACACAGGAGCCAGGACCCTCGCAGATA...CGGAAATGCAGATGTGTAAGGAGAATGAGAGGAATGAGTTAAAGTGGTTATGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp AAGAGTAGCACAGAAACCAGGCTCTGGAGAAGCTGGGCTTTTCATGCTTTTTGGGTCTCTTTAGAGGTCTaGAAGAGATGGGCTCGAGCT +
Preference number: 4 (lower is better)
Translates to: KSSTETRLWRSWAFHAFWVSLEV*KRWARA
Trigger: AGCTCGAGCCCATCTCTTCCAGACCTCTAAAGAGAC...CCAAAAAGCATGAAAAGCCCAGCTTCTCCAGAGCCTGGTTTCTGTGCTACTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp TCACTCTGTAGCTCCATATCTATAGCAATTCCTTCATTTGGAAACTGGCCTTCTGCTGTAGTACAGTGGTaGTCTCCCGGAGGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: SLCSSISIAIPSFGNWPSAVVQW*SPGGGQ
Trigger: CTGCCCACCTCCGGGAGACCACCACTGTACTACAGC...AGAAGGCCAGTTTCCAAATGAAGGAATTGCTATAGATATGGAGCTACAGAGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACAACTGCTGTAGTACAGTaGTGGTCTCCCGGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTTAVVQ*WSPGGG
Trigger: CCCACCTCCGGGAGACCACCACTGTACTACAGCAGT...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACATCGGTTTATGGCTGCTaGTGCAAAGCCCCCTGGTGG +
Preference number: 4 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTSVYGC*CKAPWW
Trigger: CCACCAGGGGGCTTTGCACCAGCAGCCATAAACCGA...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACATGCCTCTGTCCTCACTaGTCTGCCCTGCAGGTCCAA +
Preference number: 4 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTCLCPH*SALQVQ
Trigger: TTGGACCTGCAGGGCAGACCAGTGAGGACAGAGGCA...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR CAA 72 bp CTGACAGATGTGCTAGTGGATGCTCGAGACTCAGGTTaGGAGACTGGTTGGCTCTTGATTATAAAAGGTGGC +
Preference number: 4 (lower is better)
Translates to: LTDVLVDARDSG*ETGWLLIIKGG
Trigger: GCCACCTTTTATAATCAAGAGCCAACCAGTCTCCAAACCTGAGTCTCGAGCATCCACTAGCACATCTGTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR CAA 72 bp AGTACAGTGGTGGTCTCCCGGAGGTGGGCAGACTTGTaGCTAGGAGATCTACAGTTTGGATTGACAATAATG +
Preference number: 4 (lower is better)
Translates to: STVVVSRRWADL*LGDLQFGLTIM
Trigger: CATTATTGTCAATCCAAACTGTAGATCTCCTAGCAACAAGTCTGCCCACCTCCGGGAGACCACCACTGTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
3UTR CAA 72 bp TGTAGTACAGTGGTGGTCTCCCGGAGGTGGGCAGACTaGTTGCTAGGAGATCTACAGTTTGGATTGACAATA +
Preference number: 4 (lower is better)
Translates to: CSTVVVSRRWAD*LLGDLQFGLTI
Trigger: TATTGTCAATCCAAACTGTAGATCTCCTAGCAACAAGTCTGCCCACCTCCGGGAGACCACCACTGTACTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp AGCACAGAAACCAGGCTCTGGAGAAGCTGGGCTTTTCATGCTTTTTGGCTGTTGTGTGTTAGTAAGGCTTaGATCTCGAGTGGAAGATGC +
Preference number: 4 (lower is better)
Translates to: STETRLWRSWAFHAFWLLCVSKA*ISSGRC
Trigger: GCATCTTCCACTCGAGATTCAAGCCTTACTAACACA...CAACAGCCAAAAAGCATGAAAAGCCCAGCTTCTCCAGAGCCTGGTTTCTGTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTACACAGATTCCTCTCTTaGCATGCCCAGCTTTTCTCC +
Preference number: 4 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVHRFLS*HAQLFS
Trigger: GGAGAAAAGCTGGGCATGTCAAGAGAGGAATCTGTG...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp GCAGTTTCTGGAAGTTTACTTGGGTTAAGAGACTGCTGTAGTACAGTGGTGGTCCACAGATTCCTCTCTTaGCATGCCCAGCTTTTCTCC +
Preference number: 4 (lower is better)
Translates to: AVSGSLLGLRDCCSTVVVHRFLS*HAQLFS
Trigger: GGAGAAAAGCTGGGCATGTCAAGAGAGGAATCTGTG...GACCACCACTGTACTACAGCAGTCTCTTAACCCAAGTAAACTTCCAGAAACTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp AAACTCCATTTTCTTCTCCATGGGCATTTGCCTCGGCCATATCTGTACCATCCAAAGTGGTCTCAGAGGTaGGAAGCATGGAAGACACTG +
Preference number: 4 (lower is better)
Translates to: KLHFLLHGHLPRPYLYHPKWSQR*EAWKTL
Trigger: CAGTGTCTTCCATGCTTCTCACCTCTGAGACCACTT...TGGATGGTACAGATATGGCCGAGGCAAATGCCCATGGAGAAGAAAATGGAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp AGAAACCAGGCTCTGGAGAAGCTGGGCTTTTCATGCTTTTTGGCTGTTGTTCTGCCAATTTTGGAAAGCTaGATCTTGAGAGGGGGAACC +
Preference number: 4 (lower is better)
Translates to: RNQALEKLGFSCFLAVVLPILES*ILRGGT
Trigger: GGTTCCCCCTCTCAAGATTCAGCTTTCCAAAATTGG...CAGAACAACAGCCAAAAAGCATGAAAAGCCCAGCTTCTCCAGAGCCTGGTTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTAGCAATGGAAGCCTGTTaGTTTCAAGCTTGGCTCCCA +
Preference number: 4 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVAMEAC*FQAWLP
Trigger: TGGGAGCCAAGCTTGAAATCAACAGGCTTCCATTGC...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACATGGCTGTGTCCTAGCTaGCTGATGCCGGAACTGATG +
Preference number: 4 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTWLCPS*LMPELM
Trigger: CATCAGTTCCGGCATCAGTCAGCTAGGACACAGCCA...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTGAAAACAGAGCCTCCTaGACTACGGCTGTCCTCTGG +
Preference number: 4 (lower is better)
Translates to: FKKIWPTSARSEARMNGCENRAS*TTAVLW
Trigger: CCAGAGGACAGCCGTAGTTCAGGAGGCTCTGTTTTC...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTATTGTCGCAGTCTTACTaGATCAACTGCTCCCCCTTC +
Preference number: 4 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVLSQSY*INCSPF
Trigger: GAAGGGGGAGCAGTTGATTCAGTAAGACTGCGACAA...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp TTACTTGGGTTAAGAGACTGCTGTAGTACAGTGGTGGTCTCCCGGAGGTGGGCAATGACTTCCAATATCTaGTTTGCTGTCATTGGTGAG +
Preference number: 4 (lower is better)
Translates to: LLGLRDCCSTVVVSRRWAMTSNI*FAVIGE
Trigger: CTCACCAATGACAGCAAAGCAGATATTGGAAGTCAT...TGCCCACCTCCGGGAGACCACCACTGTACTACAGCAGTCTCTTAACCCAAGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp GACAGATGTGCTAGTGGATGCTCGAGACTCAGGTTTGGAGACTGGTTGGCTCTTGTTATCTTCAGGAGGTaGTATTTGGGGTTCTTCATG +
Preference number: 4 (lower is better)
Translates to: DRCASGCSRLRFGDWLALVIFRR*YLGFFM
Trigger: CATGAAGAACCCCAAATAGCACCTCCTGAAGATAAC...AAGAGCCAACCAGTCTCCAAACCTGAGTCTCGAGCATCCACTAGCACATCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp GTTGTTCTGCCAAGGCTGTCTGTGCAGAAACTGGAAGGCCAGAAGTCCCACATGCTCAGGGTCTTATTGTaGAAATCTTCAGACGGAAAT +
Preference number: 4 (lower is better)
Translates to: VVLPRLSVQKLEGQKSHMLRVLL*KSSDGN
Trigger: ATTTCCGTCTGAAGATTTGCACAATAAGACCCTGAG...CATGTGGGACTTCTGGCCTTCCAGTTTCTGCACAGACAGCCTTGGCAGAACAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp GAATATCCAAGGTCCAGCAGTCAACTAAACTTTCTATATAGCTCATCCCAGAAACCGGGCCTTGATATCTaGGAGGGTCCTGGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: EYPRSSSQLNFLYSSSQKPGLDI*EGPGSC
Trigger: ACAGGAGCCAGGACCCTCGCAGATATCAAGGCCCGG...TTTCTGGGATGAGCTATATAGAAAGTTTAGTTGACTGCTGGACCTTGGATATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp AATATATGGAATGTAGCTCAAATACTCAACACGCAGACTTTACTGGATGCACACCCGGGCCTTGATATCTaGGAGGGTCCTGGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: NIWNVAQILNTQTLLDAHPGLDI*EGPGSC
Trigger: ACAGGAGCCAGGACCCTCGCAGATATCAAGGCCCGG...GTGTGCATCCAGTAAAGTCTGCGTGTTGAGTATTTGAGCTACATTCCATATATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp ACAATGAAGGAACTGATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCTGGCTCCAGAGACAATaGTCGCTGCAGCAGCCACAG +
Preference number: 4 (lower is better)
Translates to: TMKELIMSSVSHQPQLYLWLQRQ*SLQQPQ
Trigger: CTGTGGCTGCTGCAGCGAGCATTGTCTCTGGAGCCA...GAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTATCAGTTCCTTCATTGT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp TCACTCTGTAGCTCCATATCTATAGCAATTCCTTCATTTGGAAACTGGCCTTCTTGGCTCCAGAGACAATaGTCGCTGCAGCAGCCACAG +
Preference number: 4 (lower is better)
Translates to: SLCSSISIAIPSFGNWPSWLQRQ*SLQQPQ
Trigger: CTGTGGCTGCTGCAGCGAGCATTGTCTCTGGAGCCA...AGAAGGCCAGTTTCCAAATGAAGGAATTGCTATAGATATGGAGCTACAGAGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp GGCGAATCCGACTGCTCATCAGACACCTTTAATGGTGTCAAAACAACACGAGGACTTGGGTTAAGAGACTaGTGTAGTACAGTGGTGGTC +
Preference number: 4 (lower is better)
Translates to: GESDCSSDTFNGVKTTRGLGLRD*CSTVVV
Trigger: GACCACCACTGTACTACAGCAGTCTCTTAACCCAAG...TCCTCGTGTTGTTTTGACACCATTAAAGGTGTCTGATGAGCAGTCGGATTCGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp GTTCTCGTCTTTCCACCCTCTCCTGGACTTCCCATGGCTCCAGAGACAATGCTCTTTTCATCAGAACTATaGACAGATAAGTCAGTGGCA +
Preference number: 4 (lower is better)
Translates to: VLVFPPSPGLPMAPETMLFSSEL*TDKSVA
Trigger: TGCCACTGACTTATCTGTGCATAGTTCTGATGAAAA...GAGCATTGTCTCTGGAGCCATGGGAAGTCCAGGAGAGGGTGGAAAGACGAGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp GGCTGGTACAGGCTCCCTCTGGGCTCTCAGAAGAAAAGGACGTTTCAGAGATGCTTTTCATCAGAACTATaGACAGATAAGTCAGTGGCA +
Preference number: 4 (lower is better)
Translates to: GWYRLPLGSQKKRTFQRCFSSEL*TDKSVA
Trigger: TGCCACTGACTTATCTGTGCATAGTTCTGATGAAAA...GCATCTCTGAAACGTCCTTTTCTTCTGAGAGCCCAGAGGGAGCCTGTACCAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp TGCATAACCACTTTAACTCATTCCTCTCATTCTCCTTACACATCTGCATTTCCGCTCACTGGTCTGCCCTaGAGGTCCAAGCTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: CITTLTHSSHSPYTSAFPLTGLP*RSKLAS
Trigger: AGAAGCCAGCTTGGACCTGCAGGGCAGACCAGTGAG...CGGAAATGCAGATGTGTAAGGAGAATGAGAGGAATGAGTTAAAGTGGTTATGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp TGTCTTTATACACCTCAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATCTGTCCTCACTGGTCTaGCCTGCAGGTCCAAGCTGG +
Preference number: 4 (lower is better)
Translates to: CLYTPQAYAYLIGGGLGNLSSLV*PAGPSW
Trigger: CCAGCTTGGACCTGCAGGGCAGACCAGTGAGGACAG...ATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTGAGGTGTATAAAGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTCACGGGCTGTACGGATaGCTCTGTCCTCACTGGTCT +
Preference number: 4 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPHGLYG*LCPHWS
Trigger: AGACCAGTGAGGACAGAGGCATCCGTACAGCCCGTG...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTAATTCTCGGAGACTTGTaGAGGTGGCCGGCAATGTTT +
Preference number: 4 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVILGDL*RWPAMF
Trigger: AAACATTGCCGGCCACCTGCACAAGTCTCCGAGAAT...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTTGGTGCCAGAGTCCCTaGCAAGTAGCCCTTACCATC +
Preference number: 4 (lower is better)
Translates to: FKKIWPTSARSEARMNGCWCQSP*QVALTI
Trigger: GATGGTAAGGGCTACTTGGCAGGGACTCTGGCACCA...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTACACTGGAACTTATGCTaGTTTCCTCGGGTAAGGCTG +
Preference number: 4 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVHWNLC*FPRVRL
Trigger: CAGCCTTACCCGAGGAAAGCAGCATAAGTTCCAGTG...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACACCACCGTACAGACGATaGTACCCTAGGCTTGGCTTC +
Preference number: 4 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTPPYRR*YPRLGF
Trigger: GAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGG...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp TATGATGGGTTCGGGAGTATTAGACAGATTCTTCTGCTGGGAGGTAAGGTTCTCGCTGTCTCCAAGCCATaGCGGGGTCTTGTTTCTTTT +
Preference number: 4 (lower is better)
Translates to: YDGFGSIRQILLLGGKVLAVSKP*RGLVSF
Trigger: AAAAGAAACAAGACCCCGGCATGGCTTGGAGACAGC...GAGAACCTTACCTCCCAGCAGAAGAATCTGTCTAATACTCCCGAACCCATCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592541.6
CDS-3UTR CCA 90 bp CTTTGTCTGCTCTTTGATGTGTGCCAGAGTTCTCGTCTTTCCACCCTCTCCTGGTTTTTGGTGTGCTGCTaGAAGGAAGACACTAACTTG +
Preference number: 4 (lower is better)
Translates to: LCLLFDVCQSSRLSTLSWFLVCC*KEDTNL
Trigger: CAAGTTAGTGTCTTCCTTCCAGCAGCACACCAAAAA...CCAGGAGAGGGTGGAAAGACGAGAACTCTGGCACACATCAAAGAGCAGACAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp ACAGTGGTGGTCTCCCGGAGGTGGGCAGACTTGTTGCTAGGAGATCTACAGTTTGACAAGAATAGATCCTaGGGTTTCTATGTCAATGTC +
Preference number: 4 (lower is better)
Translates to: TVVVSRRWADLLLGDLQFDKNRS*GFYVNV
Trigger: GACATTGACATAGAAACCCCAGGATCTATTCTTGTC...AAACTGTAGATCTCCTAGCAACAAGTCTGCCCACCTCCGGGAGACCACCACTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592288.6
ENST00000593195.6
CDS-3UTR CCA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTAAGCTCCAGCGTTGTTTaGTCCAGTAGTGAGCTTCAC +
Preference number: 4 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVSSSVV*SSSELH
Trigger: GTGAAGCTCACTACTGGACCAAACAACGCTGGAGCT...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp AAACTCCATTTTCTTCTCCATGGGCATTTGCCTCGGCCATATCTGTACCATCCATGTCTGTGCAGAAACTaGAAGGCCAGAAGTCCCACA +
Preference number: 4 (lower is better)
Translates to: KLHFLLHGHLPRPYLYHPCLCRN*KARSPT
Trigger: TGTGGGACTTCTGGCCTTCCAGTTTCTGCACAGACA...TGGATGGTACAGATATGGCCGAGGCAAATGCCCATGGAGAAGAAAATGGAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp CCATCAGGTGACTTGGAGGGCTCTGATGACTTGGAAGTATGTGAGGTTTCTAACAGGCTCTGGAGAAGCTaGGCTTTTCATGCTTTTTGG +
Preference number: 4 (lower is better)
Translates to: PSGDLEGSDDLEVCEVSNRLWRS*AFHAFW
Trigger: CCAAAAAGCATGAAAAGCCCAGCTTCTCCAGAGCCT...GTTAGAAACCTCACATACTTCCAAGTCATCAGAGCCCTCCAAGTCACCTGATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp GGCGAATCCGACTGCTCATCAGACACCTTTAATGGTGTCAAAACAACACGAGGAACAGAAACCAGGCTCTaGAGAAGCTGGGCTTTTCAT +
Preference number: 4 (lower is better)
Translates to: GESDCSSDTFNGVKTTRGTETRL*RSWAFH
Trigger: ATGAAAAGCCCAGCTTCTCCAGAGCCTGGTTTCTGT...TCCTCGTGTTGTTTTGACACCATTAAAGGTGTCTGATGAGCAGTCGGATTCGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp TCTTTAGGTGGAATTTCTACCATAGGGCAAAGAGTAGCACAGAAACCAGGCTCTGGTACAGGCTCCCTCTaGGCTCTCAGAAGAAAAGGA +
Preference number: 4 (lower is better)
Translates to: SLGGISTIGQRVAQKPGSGTGSL*ALRRKG
Trigger: TCCTTTTCTTCTGAGAGCCCAGAGGGAGCCTGTACC...AGAGCCTGGTTTCTGTGCTACTCTTTGCCCTATGGTAGAAATTCCACCTAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp AACATCATTCATCATAACACAGGATTCCAAGTTATCTTCAGGAGGTGCTATTTGCTGGAGAAGGCAGGCTaGTACAGGCTCCCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: NIIHHNTGFQVIFRRCYLLEKAG*YRLPLG
Trigger: GCCCAGAGGGAGCCTGTACCAGCCTGCCTTCTCCAG...CAAATAGCACCTCCTGAAGATAACTTGGAATCCTGTGTTATGATGAATGATGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTCTGTGTTTCCCCTCCTaGAGAAGGCAGGCTGGTACA +
Preference number: 4 (lower is better)
Translates to: FKKIWPTSARSEARMNGCLCFPS*RRQAGT
Trigger: TGTACCAGCCTGCCTTCTCCAGGAGGGGAAACACAG...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp TCTCTGAATCTCTACTTTCATTTCTTATCCCATCAGGTGACTTGGAGGGCTCTGTCTCTCCCAGAGGTTTaGCAGTGGCGGAAGACTCAT +
Preference number: 4 (lower is better)
Translates to: SLNLYFHFLSHQVTWRALSLPEV*QWRKTH
Trigger: ATGAGTCTTCCGCCACTGCCAAACCTCTGGGAGAGA...CAGAGCCCTCCAAGTCACCTGATGGGATAAGAAATGAAAGTAGAGATTCAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp ACGTTTCAGAGATGCAGGCATTTTCTGAAAGCTGTTCTTCAGGGTCACTCTGTATCCCATCAGGTGACTTaGAGGGCTCTGATGACTTGG +
Preference number: 4 (lower is better)
Translates to: TFQRCRHFLKAVLQGHSVSHQVT*RALMTW
Trigger: CCAAGTCATCAGAGCCCTCCAAGTCACCTGATGGGA...TACAGAGTGACCCTGAAGAACAGCTTTCAGAAAATGCCTGCATCTCTGAAACGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp CTATTTGGGGTTCTTCATGAGAATTGGTTAGACTTTCAGCCTCCTCAGAAAATTGAGAGGGGGAACCCTTaGTTCCTCTCTGGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: LFGVLHENWLDFQPPQKIERGNP*FLSGRL
Trigger: CAGCCTCCCAGAGAGGAACCAAGGGTTCCCCCTCTC...AATTTTCTGAGGAGGCTGAAAGTCTAACCAATTCTCATGAAGAACCCCAAATAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp GAATATCCAAGGTCCAGCAGTCAACTAAACTTTCTATATAGCTCATCCCAGAAAGAGAGGGGGAACCCTTaGTTCCTCTCTGGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: EYPRSSSQLNFLYSSSQKERGNP*FLSGRL
Trigger: CAGCCTCCCAGAGAGGAACCAAGGGTTCCCCCTCTC...TTTCTGGGATGAGCTATATAGAAAGTTTAGTTGACTGCTGGACCTTGGATATTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp TGCTCTTTGATGTGTGCCAGAGTTCTCGTCTTTCCACCCTCTCCTGGACTTCCCCTCAGGTTTGGAGACTaGTTGGCTCTTGATTATAAA +
Preference number: 4 (lower is better)
Translates to: CSLMCARVLVFPPSPGLPLRFGD*LALDYK
Trigger: TTTATAATCAAGAGCCAACCAGTCTCCAAACCTGAG...GGGAAGTCCAGGAGAGGGTGGAAAGACGAGAACTCTGGCACACATCAAAGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp TGTCTTTATACACCTCAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATTGGGCCCGAGCTTGTTaGGCCCGGGCCTTGATATCT +
Preference number: 4 (lower is better)
Translates to: CLYTPQAYAYLIGGGLGNWARAC*ARALIS
Trigger: AGATATCAAGGCCCGGGCCCAACAAGCTCGGGCCCA...ATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTGAGGTGTATAAAGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp TGTCTTTATACACCTCAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATGCTGTAGTACAGTGGTaGTCTCCCGGAGGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: CLYTPQAYAYLIGGGLGNAVVQW*SPGGGQ
Trigger: CTGCCCACCTCCGGGAGACCACCACTGTACTACAGC...ATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTGAGGTGTATAAAGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp TGCATAACCACTTTAACTCATTCCTCTCATTCTCCTTACACATCTGCATTTCCGTCGGTTTATGGCTGCTaGTGCAAAGCCCCCTGGTGG +
Preference number: 4 (lower is better)
Translates to: CITTLTHSSHSPYTSAFPSVYGC*CKAPWW
Trigger: CCACCAGGGGGCTTTGCACCAGCAGCCATAAACCGA...CGGAAATGCAGATGTGTAAGGAGAATGAGAGGAATGAGTTAAAGTGGTTATGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTAGAATTGATCGGTTTATaGCTGCTGGTGCAAAGCCCC +
Preference number: 4 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVELIGL*LLVQSP
Trigger: GGGGCTTTGCACCAGCAGCCATAAACCGATCAATTC...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTAGTCAGCGTGGTGCTGTaGTCAACGATGACTTTACAC +
Preference number: 4 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVVSVVL*STMTLH
Trigger: GTGTAAAGTCATCGTTGACCACAGCACCACGCTGAC...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp ACAATGAAGGAACTGATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCTGCCTCTGTCCTCACTaGTCTGCCCTGCAGGTCCAA +
Preference number: 4 (lower is better)
Translates to: TMKELIMSSVSHQPQLYLCLCPH*SALQVQ
Trigger: TTGGACCTGCAGGGCAGACCAGTGAGGACAGAGGCA...GAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTATCAGTTCCTTCATTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTAGGAGACTTGTGCAGGTaGCCGGCAATGTTTTACTGT +
Preference number: 4 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVGDLCR*PAMFYC
Trigger: ACAGTAAAACATTGCCGGCCACCTGCACAAGTCTCC...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTAACTACGGCTGTCCTCTaGTATGAGGGTGGCCAAAAT +
Preference number: 4 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVTTAVL*YEGGQN
Trigger: ATTTTGGCCACCCTCATACCAGAGGACAGCCGTAGT...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTACACCACGGAGGAACTaGGAAACCAGAGGCCACGGT +
Preference number: 4 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPTPRRN*ETRGHG
Trigger: ACCGTGGCCTCTGGTTTCCCAGTTCCTCCGTGGTGT...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp TATGATGGGTTCGGGAGTATTAGACAGATTCTTCTGCTGGGAGGTAAGGTTCTCGAGAGCATAGAGGCCTaGCTTTCCAGGGATTTTGAA +
Preference number: 4 (lower is better)
Translates to: YDGFGSIRQILLLGGKVLESIEA*LSRDFE
Trigger: TTCAAAATCCCTGGAAAGTCAGGCCTCTATGCTCTC...GAGAACCTTACCTCCCAGCAGAAGAATCTGTCTAATACTCCCGAACCCATCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp TTCATCCTGGCATTCACAGATACTAGTCTCTACCTCTTCTGCAATTTCCTCCTGCACAGATTCCTCTCTTaGCATGCCCAGCTTTTCTCC +
Preference number: 4 (lower is better)
Translates to: FILAFTDTSLYLFCNFLLHRFLS*HAQLFS
Trigger: GGAGAAAAGCTGGGCATGTCAAGAGAGGAATCTGTG...CAGGAGGAAATTGCAGAAGAGGTAGAGACTAGTATCTGTGAATGCCAGGATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp AAGAGTAGCACAGAAACCAGGCTCTGGAGAAGCTGGGCTTTTCATGCTTTTTGGCATGAAGAACTACTTTaGGCTCCAGCGTTGTTTGGT +
Preference number: 4 (lower is better)
Translates to: KSSTETRLWRSWAFHAFWHEELL*APALFG
Trigger: ACCAAACAACGCTGGAGCTCAAAGTAGTTCTTCATG...CCAAAAAGCATGAAAAGCCCAGCTTCTCCAGAGCCTGGTTTCTGTGCTACTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTACCTGTTTCGAGGCCCTaGATTTTTGTCCAAGCTTTC +
Preference number: 4 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVPVSRP*IFVQAF
Trigger: GAAAGCTTGGACAAAAATTCAGGGCCTCGAAACAGG...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp GAATATCCAAGGTCCAGCAGTCAACTAAACTTTCTATATAGCTCATCCCAGAAACTAATCACAGACACCTaGGGACACGCCACGGGCTGT +
Preference number: 4 (lower is better)
Translates to: EYPRSSSQLNFLYSSSQKLITDT*GHATGC
Trigger: ACAGCCCGTGGCGTGTCCTCAGGTGTCTGTGATTAG...TTTCTGGGATGAGCTATATAGAAAGTTTAGTTGACTGCTGGACCTTGGATATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTTGCTCAGCAAAGTTATaGCTGGGAGCAGTCGGCTCA +
Preference number: 4 (lower is better)
Translates to: FKKIWPTSARSEARMNGCCSAKL*LGAVGS
Trigger: TGAGCCGACTGCTCCCAGTCATAACTTTGCTGAGCA...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACATGTCTGCTTCACTTTTaGAAGGAGCTGGGCCACGTG +
Preference number: 4 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTCLLHF*KELGHV
Trigger: CACGTGGCCCAGCTCCTTTCAAAAGTGAAGCAGACA...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTACCCTTGTCTGCTTCGTaGAGTTCAGATTTCACAGGA +
Preference number: 4 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVPLSAS*SSDFTG
Trigger: TCCTGTGAAATCTGAACTTCACGAAGCAGACAAGGG...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTACTCTTCCATGGGACTTaGGGTGGAAGCTTTCATGTT +
Preference number: 4 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVLFHGT*GGSFHV
Trigger: AACATGAAAGCTTCCACCTCAAGTCCCATGGAAGAG...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACAGCCGCTTTTGCTGTTTaGCCTCAGGGCTGTGAACAA +
Preference number: 4 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTAAFAV*PQGCEQ
Trigger: TTGTTCACAGCCCTGAGGTCAAACAGCAAAAGCGGC...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTGCCGCTTTTGCTGTTTaGCCTCAGGGCTGTGAACAA +
Preference number: 4 (lower is better)
Translates to: FKKIWPTSARSEARMNGCAAFAV*PQGCEQ
Trigger: TTGTTCACAGCCCTGAGGTCAAACAGCAAAAGCGGC...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp TGCATAACCACTTTAACTCATTCCTCTCATTCTCCTTACACATCTGCATTTCCGGAAAACAGAGCCTCCTaGACTACGGCTGTCCTCTGG +
Preference number: 4 (lower is better)
Translates to: CITTLTHSSHSPYTSAFPENRAS*TTAVLW
Trigger: CCAGAGGACAGCCGTAGTTCAGGAGGCTCTGTTTTC...CGGAAATGCAGATGTGTAAGGAGAATGAGAGGAATGAGTTAAAGTGGTTATGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTAACGCAGATGGACAGTaGCTCTGGGCTCTGCATGCT +
Preference number: 4 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPNADGQ*LWALHA
Trigger: AGCATGCAGAGCCCAGAGTCACTGTCCATCTGCGTT...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTGGCTACATAGGCCCCTaGCAGTCTGATTCAGAGTTC +
Preference number: 4 (lower is better)
Translates to: FKKIWPTSARSEARMNGCGYIGP*QSDSEF
Trigger: GAACTCTGAATCAGACTGTCAGGGGCCTATGTAGCC...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp ACGTTTCAGAGATGCAGGCATTTTCTGAAAGCTGTTCTTCAGGGTCACTCTGTATTCAGCATCACCTCATaGCCAACACGAAAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: TFQRCRHFLKAVLQGHSVFSITS*PTRKQL
Trigger: CAGCTGCTTTCGTGTTGGTCATGAGGTGATGCTGAA...TACAGAGTGACCCTGAAGAACAGCTTTCAGAAAATGCCTGCATCTCTGAAACGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp GATGACTTGGAAGTATGTGAGGTTTCTAACCGACTCTGTGTACTCCCTTGCTTACATTTCCGGAAGGAATaGACGGAACCACTCCAATGC +
Preference number: 4 (lower is better)
Translates to: DDLEVCEVSNRLCVLPCLHFRKE*TEPLQC
Trigger: GCATTGGAGTGGTTCCGTTCATTCCTTCCGGAAATG...TAAGCAAGGGAGTACACAGAGTCGGTTAGAAACCTCACATACTTCCAAGTCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTCCATTTCAAGTGCCCTaGAGGCGAATCCGACTGCTC +
Preference number: 4 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPPFQVP*RRIRLL
Trigger: GAGCAGTCGGATTCGCCTTCAGGGCACTTGAAATGG...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681521.1
CDS-3UTR GCA 90 bp GATGACTTGGAAGTATGTGAGGTTTCTAACCGACTCTGTGTACTCCCTTGCTTATTCTCCATGGGCATTTaGCTCGGCCATATCTGTACC +
Preference number: 4 (lower is better)
Translates to: DDLEVCEVSNRLCVLPCLFSMGI*LGHICT
Trigger: GGTACAGATATGGCCGAGGCAAATGCCCATGGAGAA...TAAGCAAGGGAGTACACAGAGTCGGTTAGAAACCTCACATACTTCCAAGTCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp AAGAGTAGCACAGAAACCAGGCTCTGGAGAAGCTGGGCTTTTCATGCTTTTTGGGAAGGCGAATCCGACTaGTCATCAGACACCTTTAAT +
Preference number: 4 (lower is better)
Translates to: KSSTETRLWRSWAFHAFWEGESD*SSDTFN
Trigger: ATTAAAGGTGTCTGATGAGCAGTCGGATTCGCCTTC...CCAAAAAGCATGAAAAGCCCAGCTTCTCCAGAGCCTGGTTTCTGTGCTACTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp GACAGATGTGCTAGTGGATGCTCGAGACTCAGGTTTGGAGACTGGTTGGCTCTTTCCTTCTCAATTTCTTaGCTTATCCGCAACTGCATT +
Preference number: 4 (lower is better)
Translates to: DRCASGCSRLRFGDWLALSFSIS*LIRNCI
Trigger: AATGCAGTTGCGGATAAGGCAAGAAATTGAGAAGGA...AAGAGCCAACCAGTCTCCAAACCTGAGTCTCGAGCATCCACTAGCACATCTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTATTTTGGCTGTTGTTCTaGCAAGGCTGTCTGTGCAGA +
Preference number: 4 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVFWLLF*QGCLCR
Trigger: TCTGCACAGACAGCCTTGGCAGAACAACAGCCAAAA...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp GGAAGGAATGAACGGAACCACTCCAATGCAATCCCAGCCACTCCTGCTAGTTCACTCAGGGTCTTATTGTaGAAATCTTCAGACGGAAAT +
Preference number: 4 (lower is better)
Translates to: GRNERNHSNAIPATPASSLRVLL*KSSDGN
Trigger: ATTTCCGTCTGAAGATTTGCACAATAAGACCCTGAG...TGAACTAGCAGGAGTGGCTGGGATTGCATTGGAGTGGTTCCGTTCATTCCTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp CGGAGGTGGGCAGACTTGTTGCTAGGAGATCTACAGTTTGGATTGACAATAATGAGATGTGCTAGTGGATaGTCGAGACTCAGGTTTGGA +
Preference number: 4 (lower is better)
Translates to: RRWADLLLGDLQFGLTIMRCASG*SRLRFG
Trigger: TCCAAACCTGAGTCTCGAGCATCCACTAGCACATCT...CATTATTGTCAATCCAAACTGTAGATCTCCTAGCAACAAGTCTGCCCACCTCCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp ACAGATACTAGTCTCTACCTCTTCTGCAATTTCCTCCTGAATTACAGATTCTTCAGAGACAATGCTCGCTaGAGCAGCCACAGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: TDTSLYLFCNFLLNYRFFRDNAR*SSHSSS
Trigger: GCTGCTGCTGTGGCTGCTGCAGCGAGCATTGTCTCT...GAAGAATCTGTAATTCAGGAGGAAATTGCAGAAGAGGTAGAGACTAGTATCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp CTATTTGGGGTTCTTCATGAGAATTGGTTAGACTTTCAGCCTCCTCAGAAAATTAGAGACAATGCTCGCTaGAGCAGCCACAGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: LFGVLHENWLDFQPPQKIRDNAR*SSHSSS
Trigger: GCTGCTGCTGTGGCTGCTGCAGCGAGCATTGTCTCT...AATTTTCTGAGGAGGCTGAAAGTCTAACCAATTCTCATGAAGAACCCCAAATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp TGTCTTTATACACCTCAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATTGGCTCCAGAGACAATaGTCGCTGCAGCAGCCACAG +
Preference number: 4 (lower is better)
Translates to: CLYTPQAYAYLIGGGLGNWLQRQ*SLQQPQ
Trigger: CTGTGGCTGCTGCAGCGAGCATTGTCTCTGGAGCCA...ATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTGAGGTGTATAAAGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTACTGCAGCTGAGGGCTaGTCTCACAGTGGTACCCAT +
Preference number: 4 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPTAAEG*SHSGTH
Trigger: ATGGGTACCACTGTGAGAGCAGCCCTCAGCTGCAGT...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTAGGAGCTGGGCCACGTaGCTGCTCAGCAAAGTTATG +
Preference number: 4 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPRSWAT*LLSKVM
Trigger: CATAACTTTGCTGAGCAGGCACGTGGCCCAGCTCCT...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp ACAATGAAGGAACTGATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCTGGTGCCAGAGTCCCTaGCAAGTAGCCCTTACCATC +
Preference number: 4 (lower is better)
Translates to: TMKELIMSSVSHQPQLYLWCQSP*QVALTI
Trigger: GATGGTAAGGGCTACTTGGCAGGGACTCTGGCACCA...GAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTATCAGTTCCTTCATTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp GAATATCCAAGGTCCAGCAGTCAACTAAACTTTCTATATAGCTCATCCCAGAAAGGGAGCAGCCGCTTTTaGTGTTTGACCTCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: EYPRSSSQLNFLYSSSQKGSSRF*CLTSGL
Trigger: CAGCCCTGAGGTCAAACAGCAAAAGCGGCTGCTCCC...TTTCTGGGATGAGCTATATAGAAAGTTTAGTTGACTGCTGGACCTTGGATATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp TGTCTTTATACACCTCAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATGGGAGCAGCCGCTTTTaGTGTTTGACCTCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: CLYTPQAYAYLIGGGLGNGSSRF*CLTSGL
Trigger: CAGCCCTGAGGTCAAACAGCAAAAGCGGCTGCTCCC...ATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTGAGGTGTATAAAGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACAGTTTGGCATTGTGTGTaGAGTGCCTCCCACCTCATC +
Preference number: 4 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTVWHCV*SASHLI
Trigger: GATGAGGTGGGAGGCACTGCACACACAATGCCAAAC...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTATGCCCAGTTCACAGCTaGTGCTTAAACCTTCCTCAA +
Preference number: 4 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVCPVHS*CLNLPQ
Trigger: TTGAGGAAGGTTTAAGCAGCAGCTGTGAACTGGGCA...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp GAATATCCAAGGTCCAGCAGTCAACTAAACTTTCTATATAGCTCATCCCAGAAAACTCTGGGCTCTGCATaGTCAGGGGGTCATTCCCAC +
Preference number: 4 (lower is better)
Translates to: EYPRSSSQLNFLYSSSQKTLGSA*SGGHSH
Trigger: GTGGGAATGACCCCCTGAGCATGCAGAGCCCAGAGT...TTTCTGGGATGAGCTATATAGAAAGTTTAGTTGACTGCTGGACCTTGGATATTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp CTATTTGGGGTTCTTCATGAGAATTGGTTAGACTTTCAGCCTCCTCAGAAAATTGCTGTCTCCAAGCCATaGCGGGGTCTGAAACCAGAC +
Preference number: 4 (lower is better)
Translates to: LFGVLHENWLDFQPPQKIAVSKP*RGLKPD
Trigger: GTCTGGTTTCAGACCCCGGCATGGCTTGGAGACAGC...AATTTTCTGAGGAGGCTGAAAGTCTAACCAATTCTCATGAAGAACCCCAAATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000593195.6
CDS-3UTR CCA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTGTTCTGATGATGACGTaGGGGATTCCACGGGGTGCT +
Preference number: 4 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPVLMMT*GIPRGA
Trigger: AGCACCCCGTGGAATCCCCCACGTCATCATCAGAAC...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTACCATTTTCTTCTCCATaGGCATTTGCCTCGGCCATA +
Preference number: 4 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVPFSSP*AFASAI
Trigger: TATGGCCGAGGCAAATGCCCATGGAGAAGAAAATGG...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp GACAGATGTGCTAGTGGATGCTCGAGACTCAGGTTTGGAGACTGGTTGGCTCTTGACAAGAATAGATCCTaGGGTTTCTATGTCAATGTC +
Preference number: 4 (lower is better)
Translates to: DRCASGCSRLRFGDWLALDKNRS*GFYVNV
Trigger: GACATTGACATAGAAACCCCAGGATCTATTCTTGTC...AAGAGCCAACCAGTCTCCAAACCTGAGTCTCGAGCATCCACTAGCACATCTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592288.6
ENST00000593195.6
CDS-3UTR CCA 90 bp TTCATCCTGGCATTCACAGATACTAGTCTCTACCTCTTCTGCAATTTCCTCCTGCCGCAACTGCATTTCTaGGGTAAACTCTCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: FILAFTDTSLYLFCNFLLPQLHF*GKLSFC
Trigger: GCAGAAGGAGAGTTTACCCCAGAAATGCAGTTGCGG...CAGGAGGAAATTGCAGAAGAGGTAGAGACTAGTATCTGTGAATGCCAGGATGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTAACAGAAACCAGGCTCTaGAGAAGCTGGGCTTTTCAT +
Preference number: 4 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVTETRL*RSWAFH
Trigger: ATGAAAAGCCCAGCTTCTCCAGAGCCTGGTTTCTGT...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp GGAAGTTTACTTGGGTTAAGAGACTGCTGTAGTACAGTGGTGGTCTCCCGGAGGGTTCTTCATGAGAATTaGTTAGACTTTCAGCCTCCT +
Preference number: 4 (lower is better)
Translates to: GSLLGLRDCCSTVVVSRRVLHEN*LDFQPP
Trigger: AGGAGGCTGAAAGTCTAACCAATTCTCATGAAGAAC...CCTCCGGGAGACCACCACTGTACTACAGCAGTCTCTTAACCCAAGTAAACTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACAGGTACAGGCTCCCTCTaGGCTCTCAGAAGAAAAGGA +
Preference number: 4 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTGTGSL*ALRRKG
Trigger: TCCTTTTCTTCTGAGAGCCCAGAGGGAGCCTGTACC...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTCTGTGTTTCCCCTCCTaGAGAAGGCAGGCTGGTACA +
Preference number: 4 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPLCFPS*RRQAGT
Trigger: TGTACCAGCCTGCCTTCTCCAGGAGGGGAAACACAG...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp TCTTTAGGTGGAATTTCTACCATAGGGCAAAGAGTAGCACAGAAACCAGGCTCTCCAGAGGTTTGGCAGTaGCGGAAGACTCATCTTTCT +
Preference number: 4 (lower is better)
Translates to: SLGGISTIGQRVAQKPGSPEVWQ*RKTHLS
Trigger: AGAAAGATGAGTCTTCCGCCACTGCCAAACCTCTGG...AGAGCCTGGTTTCTGTGCTACTCTTTGCCCTATGGTAGAAATTCCACCTAAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp GTTGTTCTGCCAAGGCTGTCTGTGCAGAAACTGGAAGGCCAGAAGTCCCACATGCTTGATTATAAAAGGTaGCCCAATTTTGGAAAGCTG +
Preference number: 4 (lower is better)
Translates to: VVLPRLSVQKLEGQKSHMLDYKR*PNFGKL
Trigger: CAGCTTTCCAAAATTGGGCCACCTTTTATAATCAAG...CATGTGGGACTTCTGGCCTTCCAGTTTCTGCACAGACAGCCTTGGCAGAACAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp ACAGTGGTGGTCTCCCGGAGGTGGGCAGACTTGTTGCTAGGAGATCTACAGTTTAGGAGATCTACAGTTTaGATTGACAATAATGACACC +
Preference number: 4 (lower is better)
Translates to: TVVVSRRWADLLLGDLQFRRSTV*IDNNDT
Trigger: GGTGTCATTATTGTCAATCCAAACTGTAGATCTCCT...AAACTGTAGATCTCCTAGCAACAAGTCTGCCCACCTCCGGGAGACCACCACTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp ACCTTTAATGGTGTCAAAACAACACGAGGAACAGTCTTGTTTACCATCATTGAGGTGGTCTCCCGGAGGTaGGCAGACTTGTTGCTAGGA +
Preference number: 4 (lower is better)
Translates to: TFNGVKTTRGTVLFTIIEVVSRR*ADLLLG
Trigger: TCCTAGCAACAAGTCTGCCCACCTCCGGGAGACCAC...CTCAATGATGGTAAACAAGACTGTTCCTCGTGTTGTTTTGACACCATTAAAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp GAATATCCAAGGTCCAGCAGTCAACTAAACTTTCTATATAGCTCATCCCAGAAAGTGGTCTCCCGGAGGTaGGCAGACTTGTTGCTAGGA +
Preference number: 4 (lower is better)
Translates to: EYPRSSSQLNFLYSSSQKVVSRR*ADLLLG
Trigger: TCCTAGCAACAAGTCTGCCCACCTCCGGGAGACCAC...TTTCTGGGATGAGCTATATAGAAAGTTTAGTTGACTGCTGGACCTTGGATATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp GAATATCCAAGGTCCAGCAGTCAACTAAACTTTCTATATAGCTCATCCCAGAAAACTGCTGTAGTACAGTaGTGGTCTCCCGGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: EYPRSSSQLNFLYSSSQKTAVVQ*WSPGGG
Trigger: CCCACCTCCGGGAGACCACCACTGTACTACAGCAGT...TTTCTGGGATGAGCTATATAGAAAGTTTAGTTGACTGCTGGACCTTGGATATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTTCCGATGGAGGGAGTTaGCACAGAGGTGTACTGAGT +
Preference number: 4 (lower is better)
Translates to: FKKIWPTSARSEARMNGCSDGGS*HRGVLS
Trigger: ACTCAGTACACCTCTGTGCCAACTCCCTCCATCGGA...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp ACAATGAAGGAACTGATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCGGGCTGCTCTCACAGTaGTACCCATGGATACAGTGG +
Preference number: 4 (lower is better)
Translates to: TMKELIMSSVSHQPQLYLGLLSQ*YPWIQW
Trigger: CCACTGTATCCATGGGTACCACTGTGAGAGCAGCCC...GAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTATCAGTTCCTTCATTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTCCTGCAGGTCCAAGCTaGCTTCTGAGCTTTCAACGG +
Preference number: 4 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPPAGPS*LLSFQR
Trigger: CCGTTGAAAGCTCAGAAGCCAGCTTGGACCTGCAGG...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp ACAATGAAGGAACTGATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCACTTTTGAAAGGAGCTaGGCCACGTGCCTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: TMKELIMSSVSHQPQLYLTFERS*ATCLLS
Trigger: GCTGAGCAGGCACGTGGCCCAGCTCCTTTCAAAAGT...GAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTATCAGTTCCTTCATTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTATCCCAATCTGGGCTGTaGCAACACTTTTTCCAAAGG +
Preference number: 4 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVSQSGL*QHFFQR
Trigger: CCTTTGGAAAAAGTGTTGCCACAGCCCAGATTGGGA...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp TGCATAACCACTTTAACTCATTCCTCTCATTCTCCTTACACATCTGCATTTCCGGTAGCCCTTACCATCTaGATTTGGAGAGCTGGGCGG +
Preference number: 4 (lower is better)
Translates to: CITTLTHSSHSPYTSAFPVALTI*IWRAGR
Trigger: CCGCCCAGCTCTCCAAATCCAGATGGTAAGGGCTAC...CGGAAATGCAGATGTGTAAGGAGAATGAGAGGAATGAGTTAAAGTGGTTATGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp ACAATGAAGGAACTGATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCACCCCACTGGGGTCTTaGAAGAGGCCTGTAACAGAG +
Preference number: 4 (lower is better)
Translates to: TMKELIMSSVSHQPQLYLTPLGS*KRPVTE
Trigger: CTCTGTTACAGGCCTCTTCCAAGACCCCAGTGGGGT...GAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTATCAGTTCCTTCATTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACAAGCCTGTGGCAGGATTaGAGCCACTTCCCAAAATCC +
Preference number: 4 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTSLWQD*SHFPKS
Trigger: GGATTTTGGGAAGTGGCTCCAATCCTGCCACAGGCT...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTGACCAGACAAGCCTGTaGCAGGATTGGAGCCACTTC +
Preference number: 4 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPDQTSL*QDWSHF
Trigger: GAAGTGGCTCCAATCCTGCCACAGGCTTGTCTGGTC...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTAAATCCTCTGGGCTTATaGCTATTGGCTGGCCAATTG +
Preference number: 4 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVNPLGL*LLAGQL
Trigger: CAATTGGCCAGCCAATAGCCATAAGCCCAGAGGATT...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTAGAAGCACCAAAATCATaGCTACAGCAGCAGGCCTTT +
Preference number: 4 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVEAPKS*LQQQAF
Trigger: AAAGGCCTGCTGCTGTAGCCATGATTTTGGTGCTTC...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR CAA 72 bp GCTAGTGGATGCTCGAGACTCAGGTTTGGAGACTGGTaGGCTCTTGATTATAAAAGGTGGCCCAATTTTGGA +
Preference number: 4 (lower is better)
Translates to: ASGCSRLRFGDW*ALDYKRWPNFG
Trigger: TCCAAAATTGGGCCACCTTTTATAATCAAGAGCCAACCAGTCTCCAAACCTGAGTCTCGAGCATCCACTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp TCTTTAGGTGGAATTTCTACCATAGGGCAAAGAGTAGCACAGAAACCAGGCTCTGAGAGCATAGAGGCCTaGCTTTCCAGGGATTTTGAA +
Preference number: 4 (lower is better)
Translates to: SLGGISTIGQRVAQKPGSESIEA*LSRDFE
Trigger: TTCAAAATCCCTGGAAAGTCAGGCCTCTATGCTCTC...AGAGCCTGGTTTCTGTGCTACTCTTTGCCCTATGGTAGAAATTCCACCTAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACACACAGATTCCTCTCTTaGCATGCCCAGCTTTTCTCC +
Preference number: 4 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTHRFLS*HAQLFS
Trigger: GGAGAAAAGCTGGGCATGTCAAGAGAGGAATCTGTG...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp GCAGTTTCTGGAAGTTTACTTGGGTTAAGAGACTGCTGTAGTACAGTGGTGGTCCTCTACTGCAGTTTCTaGCTCCTTATGTTCTGTGTC +
Preference number: 4 (lower is better)
Translates to: AVSGSLLGLRDCCSTVVVLYCSF*LLMFCV
Trigger: GACACAGAACATAAGGAGTCAGAAACTGCAGTAGAG...GACCACCACTGTACTACAGCAGTCTCTTAACCCAAGTAAACTTCCAGAAACTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp GACAGATGTGCTAGTGGATGCTCGAGACTCAGGTTTGGAGACTGGTTGGCTCTTGACATCAAAGATGCATaGAAGTTTTCATCAGTGGAA +
Preference number: 4 (lower is better)
Translates to: DRCASGCSRLRFGDWLALDIKDA*KFSSVE
Trigger: TTCCACTGATGAAAACTTTCATGCATCTTTGATGTC...AAGAGCCAACCAGTCTCCAAACCTGAGTCTCGAGCATCCACTAGCACATCTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp AAACTCCATTTTCTTCTCCATGGGCATTTGCCTCGGCCATATCTGTACCATCCAGATTTACAGGTTTGCTaGCTCAGGGTCTTATTGTGC +
Preference number: 4 (lower is better)
Translates to: KLHFLLHGHLPRPYLYHPDLQVC*LRVLLC
Trigger: GCACAATAAGACCCTGAGTCAGCAAACCTGTAAATC...TGGATGGTACAGATATGGCCGAGGCAAATGCCCATGGAGAAGAAAATGGAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp CCATCAGGTGACTTGGAGGGCTCTGATGACTTGGAAGTATGTGAGGTTTCTAACATTTCTAGAGCCTTCTaGAAATGGAGCCTTATCCAC +
Preference number: 4 (lower is better)
Translates to: PSGDLEGSDDLEVCEVSNISRAF*KWSLIH
Trigger: GTGGATAAGGCTCCATTTTCAGAAGGCTCTAGAAAT...GTTAGAAACCTCACATACTTCCAAGTCATCAGAGCCCTCCAAGTCACCTGATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACATGGAAAGCTGAATCTTaGGAGGGGGAACCCTTGGTT +
Preference number: 4 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTWKAES*EGEPLV
Trigger: AACCAAGGGTTCCCCCTCTCAAGATTCAGCTTTCCA...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTCCTTTGTCTGCTCTTTaGTGTGTGCCAGAGTTCTCG +
Preference number: 4 (lower is better)
Translates to: FKKIWPTSARSEARMNGCPLSAL*CVPEFS
Trigger: CGAGAACTCTGGCACACATCAAAGAGCAGACAAAGG...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTCCCCCTGGTGGTTGCTaGGGTTTTCCAGAATTATCT +
Preference number: 4 (lower is better)
Translates to: FKKIWPTSARSEARMNGCPPGGC*GFPELS
Trigger: AGATAATTCTGGAAAACCTCAGCAACCACCAGGGGG...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTATGCTGTGGTCAACGATaGCTTTACACGGAATTGATC +
Preference number: 4 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVCCGQR*LYTELI
Trigger: GATCAATTCCGTGTAAAGTCATCGTTGACCACAGCA...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp ACAATGAAGGAACTGATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCGTCCAAGCTGGCTTCTaGGCTTTCAACGGAGACAGT +
Preference number: 4 (lower is better)
Translates to: TMKELIMSSVSHQPQLYLVQAGF*AFNGDS
Trigger: ACTGTCTCCGTTGAAAGCTCAGAAGCCAGCTTGGAC...GAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTATCAGTTCCTTCATTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTGCAATGGAAGCCTGTTaGTTTCAAGCTTGGCTCCCA +
Preference number: 4 (lower is better)
Translates to: FKKIWPTSARSEARMNGCAMEAC*FQAWLP
Trigger: TGGGAGCCAAGCTTGAAATCAACAGGCTTCCATTGC...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp TGCATAACCACTTTAACTCATTCCTCTCATTCTCCTTACACATCTGCATTTCCGCCCACTGAGGTAGTTTaGAGAGGCAATGGAAGCCTG +
Preference number: 4 (lower is better)
Translates to: CITTLTHSSHSPYTSAFPPTEVV*RGNGSL
Trigger: CAGGCTTCCATTGCCTCTTCAAACTACCTCAGTGGG...CGGAAATGCAGATGTGTAAGGAGAATGAGAGGAATGAGTTAAAGTGGTTATGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTAAACTGCTGTCTGTGTaGGGTACCAGCGTCAGTGTG +
Preference number: 4 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPKLLSV*GTSVSV
Trigger: CACACTGACGCTGGTACCTCACACAGACAGCAGTTT...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTAGTTCAAGATGCCTGTTaGAGGCAAATGCATTACACC +
Preference number: 4 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVVQDAC*RQMHYT
Trigger: GGTGTAATGCATTTGCCTTCAACAGGCATCTTGAAC...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTATACAGTGACAAAGCATaGAGACTGAAGACGACAGGA +
Preference number: 4 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVYSDKA*RLKTTG
Trigger: TCCTGTCGTCTTCAGTCTTCATGCTTTGTCACTGTA...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp GACAGATGTGCTAGTGGATGCTCGAGACTCAGGTTTGGAGACTGGTTGGCTCTTACTTCCCATCTTTCATaGCATCTTGATTTCATGACA +
Preference number: 4 (lower is better)
Translates to: DRCASGCSRLRFGDWLALTSHLS*HLDFMT
Trigger: TGTCATGAAATCAAGATGTCATGAAAGATGGGAAGT...AAGAGCCAACCAGTCTCCAAACCTGAGTCTCGAGCATCCACTAGCACATCTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592288.6
CDS-3UTR GCA 90 bp GACAGATGTGCTAGTGGATGCTCGAGACTCAGGTTTGGAGACTGGTTGGCTCTTCTTGTCTTTCATGTTTaGATCTCATTGATGGTTCTG +
Preference number: 4 (lower is better)
Translates to: DRCASGCSRLRFGDWLALLVFHV*ISLMVL
Trigger: CAGAACCATCAATGAGATGCAAACATGAAAGACAAG...AAGAGCCAACCAGTCTCCAAACCTGAGTCTCGAGCATCCACTAGCACATCTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592288.6
CDS-3UTR GCA 90 bp GATGACTTGGAAGTATGTGAGGTTTCTAACCGACTCTGTGTACTCCCTTGCTTAGCCTTTTTGGTGTGCTaGTGGAAGGAAGACACTAAC +
Preference number: 4 (lower is better)
Translates to: DDLEVCEVSNRLCVLPCLAFLVC*WKEDTN
Trigger: GTTAGTGTCTTCCTTCCAGCAGCACACCAAAAAGGC...TAAGCAAGGGAGTACACAGAGTCGGTTAGAAACCTCACATACTTCCAAGTCATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTAGAAGGCGAATCCGACTaGTCATCAGACACCTTTAAT +
Preference number: 4 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVEGESD*SSDTFN
Trigger: ATTAAAGGTGTCTGATGAGCAGTCGGATTCGCCTTC...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp GACAGATGTGCTAGTGGATGCTCGAGACTCAGGTTTGGAGACTGGTTGGCTCTTTTTCCACCCTTGTGCTaGATATGCAAAGAATTCATT +
Preference number: 4 (lower is better)
Translates to: DRCASGCSRLRFGDWLALFPPLC*ICKEFI
Trigger: AATGAATTCTTTGCATATGCAGCACAAGGGTGGAAA...AAGAGCCAACCAGTCTCCAAACCTGAGTCTCGAGCATCCACTAGCACATCTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp GCTCATCAGACACCTTTAATGGTGTCAAAACAACACGAGGAACAGTCTTGTTTAGGTAAACTCTCCTTCTaGCAGTCGCTGTTTCCACCC +
Preference number: 4 (lower is better)
Translates to: AHQTPLMVSKQHEEQSCLGKLSF*QSLFPP
Trigger: GGGTGGAAACAGCGACTGGCAGAAGGAGAGTTTACC...TAAACAAGACTGTTCCTCGTGTTGTTTTGACACCATTAAAGGTGTCTGATGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp TATGATGGGTTCGGGAGTATTAGACAGATTCTTCTGCTGGGAGGTAAGGTTCTCTGCCTTATCCGCAACTaGATTTCTGGGGTAAACTCT +
Preference number: 4 (lower is better)
Translates to: YDGFGSIRQILLLGGKVLCLIRN*ISGVNS
Trigger: AGAGTTTACCCCAGAAATGCAGTTGCGGATAAGGCA...GAGAACCTTACCTCCCAGCAGAAGAATCTGTCTAATACTCCCGAACCCATCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACAGAAGACTCATCTTTCTaGGGGGAGAGTGGCTCTTCA +
Preference number: 4 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTEDSSF*GESGSS
Trigger: TGAAGAGCCACTCTCCCCGCAGAAAGATGAGTCTTC...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp AGAAACCAGGCTCTGGAGAAGCTGGGCTTTTCATGCTTTTTGGCTGTTGTTCTGTTAGACAGATTCTTCTaGTGGGAGGTAAGGTTCTCT +
Preference number: 4 (lower is better)
Translates to: RNQALEKLGFSCFLAVVLLDRFF*WEVRFS
Trigger: AGAGAACCTTACCTCCCAGCAGAAGAATCTGTCTAA...CAGAACAACAGCCAAAAAGCATGAAAAGCCCAGCTTCTCCAGAGCCTGGTTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp AGCACAGAAACCAGGCTCTGGAGAAGCTGGGCTTTTCATGCTTTTTGGCTGTTGCTCAGGGTCTTATTGTaGAAATCTTCAGACGGAAAT +
Preference number: 4 (lower is better)
Translates to: STETRLWRSWAFHAFWLLLRVLL*KSSDGN
Trigger: ATTTCCGTCTGAAGATTTGCACAATAAGACCCTGAG...CAACAGCCAAAAAGCATGAAAAGCCCAGCTTCTCCAGAGCCTGGTTTCTGTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp GATGACTTGGAAGTATGTGAGGTTTCTAACCGACTCTGTGTACTCCCTTGCTTAAGATGTGCTAGTGGATaGTCGAGACTCAGGTTTGGA +
Preference number: 4 (lower is better)
Translates to: DDLEVCEVSNRLCVLPCLRCASG*SRLRFG
Trigger: TCCAAACCTGAGTCTCGAGCATCCACTAGCACATCT...TAAGCAAGGGAGTACACAGAGTCGGTTAGAAACCTCACATACTTCCAAGTCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp TGTCTTTATACACCTCAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATACTGCAGCTGAGGGCTaGTCTCACAGTGGTACCCAT +
Preference number: 4 (lower is better)
Translates to: CLYTPQAYAYLIGGGLGNTAAEG*SHSGTH
Trigger: ATGGGTACCACTGTGAGAGCAGCCCTCAGCTGCAGT...ATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTGAGGTGTATAAAGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp TGTCTTTATACACCTCAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATGTTTATGGCTGCTGGTaGAAAGCCCCCTGGTGGTTG +
Preference number: 4 (lower is better)
Translates to: CLYTPQAYAYLIGGGLGNVYGCW*KAPWWL
Trigger: CAACCACCAGGGGGCTTTGCACCAGCAGCCATAAAC...ATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTGAGGTGTATAAAGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp TGTCTTTATACACCTCAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGGAGCTGGGCCACGTaGCTGCTCAGCAAAGTTATG +
Preference number: 4 (lower is better)
Translates to: CLYTPQAYAYLIGGGLGNRSWAT*LLSKVM
Trigger: CATAACTTTGCTGAGCAGGCACGTGGCCCAGCTCCT...ATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTGAGGTGTATAAAGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTACCCTTCTGTTCAAGATaGCTGTTGAAGGCAAATGCA +
Preference number: 4 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVPFCSR*LLKANA
Trigger: TGCATTTGCCTTCAACAGGCATCTTGAACAGAAGGG...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACAATCAGATGGGACTTCTaGATTAGGGAGAGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTIRWDF*IRERWR
Trigger: CCTCCACCTCTCCCTAATGCAGAAGTCCCATCTGAT...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTATCAGATGGGACTTCTaGATTAGGGAGAGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: FKKIWPTSARSEARMNGCIRWDF*IRERWR
Trigger: CCTCCACCTCTCCCTAATGCAGAAGTCCCATCTGAT...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp TGTCTTTATACACCTCAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATCCACCGTACAGACGATaGTACCCTAGGCTTGGCTTC +
Preference number: 4 (lower is better)
Translates to: CLYTPQAYAYLIGGGLGNPPYRR*YPRLGF
Trigger: GAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGG...ATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTGAGGTGTATAAAGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp GAATATCCAAGGTCCAGCAGTCAACTAAACTTTCTATATAGCTCATCCCAGAAAAGTGACTCTGGGCTCTaGATGCTCAGGGGGTCATTC +
Preference number: 4 (lower is better)
Translates to: EYPRSSSQLNFLYSSSQKSDSGL*MLRGSF
Trigger: GAATGACCCCCTGAGCATGCAGAGCCCAGAGTCACT...TTTCTGGGATGAGCTATATAGAAAGTTTAGTTGACTGCTGGACCTTGGATATTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp AATATATGGAATGTAGCTCAAATACTCAACACGCAGACTTTACTGGATGCACACGTTCTGATGATGACGTaGGGGATTCCACGGGGTGCT +
Preference number: 4 (lower is better)
Translates to: NIWNVAQILNTQTLLDAHVLMMT*GIPRGA
Trigger: AGCACCCCGTGGAATCCCCCACGTCATCATCAGAAC...GTGTGCATCCAGTAAAGTCTGCGTGTTGAGTATTTGAGCTACATTCCATATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTACTGTCATTGGTGAGTTaGGGTGTTTTTCTAGTGCCA +
Preference number: 4 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVLSLVS*GVFLVP
Trigger: TGGCACTAGAAAAACACCCCAACTCACCAATGACAG...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp TCTTTAGGTGGAATTTCTACCATAGGGCAAAGAGTAGCACAGAAACCAGGCTCTCCATTTTCTTCTCCATaGGCATTTGCCTCGGCCATA +
Preference number: 4 (lower is better)
Translates to: SLGGISTIGQRVAQKPGSPFSSP*AFASAI
Trigger: TATGGCCGAGGCAAATGCCCATGGAGAAGAAAATGG...AGAGCCTGGTTTCTGTGCTACTCTTTGCCCTATGGTAGAAATTCCACCTAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTTGTCTGTGCAGAAACTaGAAGGCCAGAAGTCCCACA +
Preference number: 4 (lower is better)
Translates to: FKKIWPTSARSEARMNGCCLCRN*KARSPT
Trigger: TGTGGGACTTCTGGCCTTCCAGTTTCTGCACAGACA...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp GATGACTTGGAAGTATGTGAGGTTTCTAACCGACTCTGTGTACTCCCTTGCTTAAGGCTCTGGAGAAGCTaGGCTTTTCATGCTTTTTGG +
Preference number: 4 (lower is better)
Translates to: DDLEVCEVSNRLCVLPCLRLWRS*AFHAFW
Trigger: CCAAAAAGCATGAAAAGCCCAGCTTCTCCAGAGCCT...TAAGCAAGGGAGTACACAGAGTCGGTTAGAAACCTCACATACTTCCAAGTCATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp TTCATCCTGGCATTCACAGATACTAGTCTCTACCTCTTCTGCAATTTCCTCCTGACAGAAACCAGGCTCTaGAGAAGCTGGGCTTTTCAT +
Preference number: 4 (lower is better)
Translates to: FILAFTDTSLYLFCNFLLTETRL*RSWAFH
Trigger: ATGAAAAGCCCAGCTTCTCCAGAGCCTGGTTTCTGT...CAGGAGGAAATTGCAGAAGAGGTAGAGACTAGTATCTGTGAATGCCAGGATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp ACAATGAAGGAACTGATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCGGTACAGGCTCCCTCTaGGCTCTCAGAAGAAAAGGA +
Preference number: 4 (lower is better)
Translates to: TMKELIMSSVSHQPQLYLGTGSL*ALRRKG
Trigger: TCCTTTTCTTCTGAGAGCCCAGAGGGAGCCTGTACC...GAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTATCAGTTCCTTCATTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp AGGTATTGTCTTATGATTTTCATCCTGGCATTCACAGATACTAGTCTCTACCTCCTGTGTTTCCCCTCCTaGAGAAGGCAGGCTGGTACA +
Preference number: 4 (lower is better)
Translates to: RYCLMIFILAFTDTSLYLLCFPS*RRQAGT
Trigger: TGTACCAGCCTGCCTTCTCCAGGAGGGGAAACACAG...GAGGTAGAGACTAGTATCTGTGAATGCCAGGATGAAAATCATAAGACAATACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp TTACTTGGGTTAAGAGACTGCTGTAGTACAGTGGTGGTCTCCCGGAGGTGGGCACATTTATGGAAGAGTTaGAAATTGGAGATGTTTCTG +
Preference number: 4 (lower is better)
Translates to: LLGLRDCCSTVVVSRRWAHLWKS*KLEMFL
Trigger: CAGAAACATCTCCAATTTCCAACTCTTCCATAAATG...TGCCCACCTCCGGGAGACCACCACTGTACTACAGCAGTCTCTTAACCCAAGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp TGCATAACCACTTTAACTCATTCCTCTCATTCTCCTTACACATCTGCATTTCCGTCTCTCCCAGAGGTTTaGCAGTGGCGGAAGACTCAT +
Preference number: 4 (lower is better)
Translates to: CITTLTHSSHSPYTSAFPSLPEV*QWRKTH
Trigger: ATGAGTCTTCCGCCACTGCCAAACCTCTGGGAGAGA...CGGAAATGCAGATGTGTAAGGAGAATGAGAGGAATGAGTTAAAGTGGTTATGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTAACTGCTTATCATCCATaGAGCTTGATATGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVTAYHP*SLICWS
Trigger: GCTCCAGCATATCAAGCTCCATGGATGATAAGCAGT...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp ACAATGAAGGAACTGATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCTCCGATGGAGGGAGTTaGCACAGAGGTGTACTGAGT +
Preference number: 4 (lower is better)
Translates to: TMKELIMSSVSHQPQLYLSDGGS*HRGVLS
Trigger: ACTCAGTACACCTCTGTGCCAACTCCCTCCATCGGA...GAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTATCAGTTCCTTCATTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACAGCAAATTGTTTCCGATaGAGGGAGTTGGCACAGAGG +
Preference number: 4 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTANCFR*RELAQR
Trigger: CCTCTGTGCCAACTCCCTCCATCGGAAACAATTTGC...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTGCAAATTGTTTCCGATaGAGGGAGTTGGCACAGAGG +
Preference number: 4 (lower is better)
Translates to: FKKIWPTSARSEARMNGCANCFR*RELAQR
Trigger: CCTCTGTGCCAACTCCCTCCATCGGAAACAATTTGC...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTAGCTAGTGGAGAGGTTTaGCAAATTGTTTCCGATGGA +
Preference number: 4 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVASGEV*QIVSDG
Trigger: TCCATCGGAAACAATTTGCCAAACCTCTCCACTAGC...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTGTCAGCGTGGTGCTGTaGTCAACGATGACTTTACAC +
Preference number: 4 (lower is better)
Translates to: FKKIWPTSARSEARMNGCVSVVL*STMTLH
Trigger: GTGTAAAGTCATCGTTGACCACAGCACCACGCTGAC...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTCAGTCAGAGACAAACTaGAGGTCAGCGTGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPQSETN*RSAWCC
Trigger: ACAGCACCACGCTGACCTCCAGTTTGTCTCTGACTG...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp AATATATGGAATGTAGCTCAAATACTCAACACGCAGACTTTACTGGATGCACACCCTGCAGGTCCAAGCTaGCTTCTGAGCTTTCAACGG +
Preference number: 4 (lower is better)
Translates to: NIWNVAQILNTQTLLDAHPAGPS*LLSFQR
Trigger: CCGTTGAAAGCTCAGAAGCCAGCTTGGACCTGCAGG...GTGTGCATCCAGTAAAGTCTGCGTGTTGAGTATTTGAGCTACATTCCATATATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTACCTTCGTTGGCAACTaGCTCAGGCCTGCTAATCAC +
Preference number: 4 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPTFVGN*LRPANH
Trigger: GTGATTAGCAGGCCTGAGCCAGTTGCCAACGAAGGT...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTGATCTATACCTTCGTTaGCAACTGGCTCAGGCCTGC +
Preference number: 4 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPDLYLR*QLAQAC
Trigger: GCAGGCCTGAGCCAGTTGCCAACGAAGGTATAGATC...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTGCTTGGCTCCCAATCTaGGCTGTGGCAACACTTTTT +
Preference number: 4 (lower is better)
Translates to: FKKIWPTSARSEARMNGCAWLPI*AVATLF
Trigger: AAAAAGTGTTGCCACAGCCCAGATTGGGAGCCAAGC...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp GAATATCCAAGGTCCAGCAGTCAACTAAACTTTCTATATAGCTCATCCCAGAAAGTAGCCCTTACCATCTaGATTTGGAGAGCTGGGCGG +
Preference number: 4 (lower is better)
Translates to: EYPRSSSQLNFLYSSSQKVALTI*IWRAGR
Trigger: CCGCCCAGCTCTCCAAATCCAGATGGTAAGGGCTAC...TTTCTGGGATGAGCTATATAGAAAGTTTAGTTGACTGCTGGACCTTGGATATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTGTACCAGCGTCAGTGTaGAAGCCGCCATTCTTGTCA +
Preference number: 4 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPVPASV*KPPFLS
Trigger: TGACAAGAATGGCGGCTTCCACACTGACGCTGGTAC...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp TGTCTTTATACACCTCAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATACCCCACTGGGGTCTTaGAAGAGGCCTGTAACAGAG +
Preference number: 4 (lower is better)
Translates to: CLYTPQAYAYLIGGGLGNTPLGS*KRPVTE
Trigger: CTCTGTTACAGGCCTCTTCCAAGACCCCAGTGGGGT...ATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTGAGGTGTATAAAGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp TGTCTTTATACACCTCAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATGACCAGACAAGCCTGTaGCAGGATTGGAGCCACTTC +
Preference number: 4 (lower is better)
Translates to: CLYTPQAYAYLIGGGLGNDQTSL*QDWSHF
Trigger: GAAGTGGCTCCAATCCTGCCACAGGCTTGTCTGGTC...ATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTGAGGTGTATAAAGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACACTTTGCACACAATCATaGCTTTCAGCCGGCAAGAGC +
Preference number: 4 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTLCTQS*LSAGKS
Trigger: GCTCTTGCCGGCTGAAAGCCATGATTGTGTGCAAAG...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACAACTACGGCTGTCCTCTaGTATGAGGGTGGCCAAAAT +
Preference number: 4 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTTTAVL*YEGGQN
Trigger: ATTTTGGCCACCCTCATACCAGAGGACAGCCGTAGT...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR CAA 72 bp GCCTTTTTGGTGTGCTGCTGGAAGGAAGACACTAACTaGCTTTGCACTGCTGTGTTAGTAAGGCTTGAATCT +
Preference number: 4 (lower is better)
Translates to: AFLVCCWKEDTN*LCTAVLVRLES
Trigger: AGATTCAAGCCTTACTAACACAGCAGTGCAAAGCAAGTTAGTGTCTTCCTTCCAGCAGCACACCAAAAAGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp AGCACAGAAACCAGGCTCTGGAGAAGCTGGGCTTTTCATGCTTTTTGGCTGTTGAATCGTTTTAAGTGCTaGCTTGTTTGTTTTCCAGTG +
Preference number: 4 (lower is better)
Translates to: STETRLWRSWAFHAFWLLNRFKC*LVCFPV
Trigger: CACTGGAAAACAAACAAGTCAGCACTTAAAACGATT...CAACAGCCAAAAAGCATGAAAAGCCCAGCTTCTCCAGAGCCTGGTTTCTGTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000592288.6
ENST00000593195.6
CDS-3UTR TCA 90 bp TGCATAACCACTTTAACTCATTCCTCTCATTCTCCTTACACATCTGCATTTCCGGCCAGAAGTCCCACATaGAGAACTACTTTGAGCTCC +
Preference number: 4 (lower is better)
Translates to: CITTLTHSSHSPYTSAFPARSPT*RTTLSS
Trigger: GGAGCTCAAAGTAGTTCTTCATGTGGGACTTCTGGC...CGGAAATGCAGATGTGTAAGGAGAATGAGAGGAATGAGTTAAAGTGGTTATGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTATCTGCAATTTCCTCCTaGATTACAGATTCTTCAGGG +
Preference number: 4 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVSAISS*ITDSSG
Trigger: CCCTGAAGAATCTGTAATTCAGGAGGAAATTGCAGA...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTATCTGTGTCACTGACATaGGTCATAGATGAAGTGGAA +
Preference number: 4 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVSVSLT*VIDEVE
Trigger: TTCCACTTCATCTATGACTCATGTCAGTGACACAGA...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp ACAATGAAGGAACTGATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCAAGTGGTCTCAGAGGTaGGAAGCATGGAAGACACTG +
Preference number: 4 (lower is better)
Translates to: TMKELIMSSVSHQPQLYLKWSQR*EAWKTL
Trigger: CAGTGTCTTCCATGCTTCTCACCTCTGAGACCACTT...GAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTATCAGTTCCTTCATTGT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp CATTTTCTTCTCCATGGGCATTTGCCTCGGCCATATCTGTACCATCCAATTCAGCTCAGTGTCAACATGTaGTTTACAGGTTTGCTGACT +
Preference number: 4 (lower is better)
Translates to: HFLLHGHLPRPYLYHPIQLSVNM*FTGLLT
Trigger: AGTCAGCAAACCTGTAAATCACATGTTGACACTGAG...CTGAATTGGATGGTACAGATATGGCCGAGGCAAATGCCCATGGAGAAGAAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp CAGGTATGTTTTCATCAGAACTATGCACAGATAAGTCAGTGGCAGTTTCTGGAAAGCAAGTTCTGGAATTaGAGCAGGGTAGGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: QVCFHQNYAQISQWQFLESKFWN*SRVGLL
Trigger: GAGAAGCCCTACCCTGCTTCAATTCCAGAACTTGCT...TTCCAGAAACTGCCACTGACTTATCTGTGCATAGTTCTGATGAAAACATACCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp ACAATGAAGGAACTGATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCAGCAAGTTCTGGAATTaGAGCAGGGTAGGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: TMKELIMSSVSHQPQLYLSKFWN*SRVGLL
Trigger: GAGAAGCCCTACCCTGCTTCAATTCCAGAACTTGCT...GAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTATCAGTTCCTTCATTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTGCCCTCTGTAGTGGCTaGAATGGGAGTGCTTTCAAT +
Preference number: 4 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPALCSG*NGSAFN
Trigger: ATTGAAAGCACTCCCATTTCAGCCACTACAGAGGGC...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACACCTGTTTCGAGGCCCTaGATTTTTGTCCAAGCTTTC +
Preference number: 4 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTPVSRP*IFVQAF
Trigger: GAAAGCTTGGACAAAAATTCAGGGCCTCGAAACAGG...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp TGCATAACCACTTTAACTCATTCCTCTCATTCTCCTTACACATCTGCATTTCCGCCCCCTGGTGGTTGCTaGGGTTTTCCAGAATTATCT +
Preference number: 4 (lower is better)
Translates to: CITTLTHSSHSPYTSAFPPPGGC*GFPELS
Trigger: AGATAATTCTGGAAAACCTCAGCAACCACCAGGGGG...CGGAAATGCAGATGTGTAAGGAGAATGAGAGGAATGAGTTAAAGTGGTTATGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp AATATATGGAATGTAGCTCAAATACTCAACACGCAGACTTTACTGGATGCACACGTCCAAGCTGGCTTCTaGGCTTTCAACGGAGACAGT +
Preference number: 4 (lower is better)
Translates to: NIWNVAQILNTQTLLDAHVQAGF*AFNGDS
Trigger: ACTGTCTCCGTTGAAAGCTCAGAAGCCAGCTTGGAC...GTGTGCATCCAGTAAAGTCTGCGTGTTGAGTATTTGAGCTACATTCCATATATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp ACAATGAAGGAACTGATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCTTACTTGAACCCGAGTaGGTAACCAGAGGCTGTCCT +
Preference number: 4 (lower is better)
Translates to: TMKELIMSSVSHQPQLYLLLEPE*VTRGCP
Trigger: AGGACAGCCTCTGGTTACTCACTCGGGTTCAAGTAA...GAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTATCAGTTCCTTCATTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTTTGACCTCAGGGCTGTaGACAATTCTGTTCTGCATG +
Preference number: 4 (lower is better)
Translates to: FKKIWPTSARSEARMNGCLTSGL*TILFCM
Trigger: CATGCAGAACAGAATTGTTCACAGCCCTGAGGTCAA...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp ACAATGAAGGAACTGATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCGCTAACCTTAGCTGGTaGGGTGCTGAGGAAAGACTA +
Preference number: 4 (lower is better)
Translates to: TMKELIMSSVSHQPQLYLANLSW*GAEERL
Trigger: TAGTCTTTCCTCAGCACCTCACCAGCTAAGGTTAGC...GAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTATCAGTTCCTTCATTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp TGCATAACCACTTTAACTCATTCCTCTCATTCTCCTTACACATCTGCATTTCCGGCTAACCTTAGCTGGTaGGGTGCTGAGGAAAGACTA +
Preference number: 4 (lower is better)
Translates to: CITTLTHSSHSPYTSAFPANLSW*GAEERL
Trigger: TAGTCTTTCCTCAGCACCTCACCAGCTAAGGTTAGC...CGGAAATGCAGATGTGTAAGGAGAATGAGAGGAATGAGTTAAAGTGGTTATGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACACAGATGCTGCCCTTTTaGAACTCGTGCTACCAAAGT +
Preference number: 4 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTQMLPF*NSCYQS
Trigger: ACTTTGGTAGCACGAGTTTCAAAAGGGCAGCATCTG...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTAGGTCTGAAGCCAGAATaGATGGGTGTCATCAATAAA +
Preference number: 4 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVGLKPE*MGVINK
Trigger: TTTATTGATGACACCCATTCATTCTGGCTTCAGACC...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACATCTTCGAAATCAGGATaGTATCAGAGCCAGGCAGAC +
Preference number: 4 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTSSKSG*YQSQAD
Trigger: GTCTGCCTGGCTCTGATATCATCCTGATTTCGAAGA...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTATTGTACCTCACATACTaGGTGCAAAGGTTCTGTAGA +
Preference number: 4 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVLYLTY*VQRFCR
Trigger: TCTACAGAACCTTTGCACTCAGTATGTGAGGTACAA...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp AATATATGGAATGTAGCTCAAATACTCAACACGCAGACTTTACTGGATGCACACGGCTACATAGGCCCCTaGCAGTCTGATTCAGAGTTC +
Preference number: 4 (lower is better)
Translates to: NIWNVAQILNTQTLLDAHGYIGP*QSDSEF
Trigger: GAACTCTGAATCAGACTGTCAGGGGCCTATGTAGCC...GTGTGCATCCAGTAAAGTCTGCGTGTTGAGTATTTGAGCTACATTCCATATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp GAATATCCAAGGTCCAGCAGTCAACTAAACTTTCTATATAGCTCATCCCAGAAACATATCAGGTTTCCATaGAGCAGGGGAAGGAGGGGA +
Preference number: 4 (lower is better)
Translates to: EYPRSSSQLNFLYSSSQKHIRFP*SRGRRG
Trigger: TCCCCTCCTTCCCCTGCTTCATGGAAACCTGATATG...TTTCTGGGATGAGCTATATAGAAAGTTTAGTTGACTGCTGGACCTTGGATATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp TGCATAACCACTTTAACTCATTCCTCTCATTCTCCTTACACATCTGCATTTCCGTTGTCGCAGTCTTACTaGATCAACTGCTCCCCCTTC +
Preference number: 4 (lower is better)
Translates to: CITTLTHSSHSPYTSAFPLSQSY*INCSPF
Trigger: GAAGGGGGAGCAGTTGATTCAGTAAGACTGCGACAA...CGGAAATGCAGATGTGTAAGGAGAATGAGAGGAATGAGTTAAAGTGGTTATGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp CATTTTCTTCTCCATGGGCATTTGCCTCGGCCATATCTGTACCATCCAATTCAGCAACACGAAAGCAGCTaGGGCTCTAATATAATCATC +
Preference number: 4 (lower is better)
Translates to: HFLLHGHLPRPYLYHPIQQHESS*GSNIII
Trigger: GATGATTATATTAGAGCCTCAGCTGCTTTCGTGTTG...CTGAATTGGATGGTACAGATATGGCCGAGGCAAATGCCCATGGAGAAGAAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp TCCTCTGACTCCAATTCTGCCATTATATCTTTAGGTGGAATTTCTACCATAGGGTTCAGCATCACCTCATaGCCAACACGAAAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: SSDSNSAIISLGGISTIGFSITS*PTRKQL
Trigger: CAGCTGCTTTCGTGTTGGTCATGAGGTGATGCTGAA...CCCTATGGTAGAAATTCCACCTAAAGATATAATGGCAGAATTGGAGTCAGAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTAGACTAAATCCAACGTaGCATCTGCTGGGCATGACG +
Preference number: 4 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPRLNPT*HLLGMT
Trigger: CGTCATGCCCAGCAGATGGCACGTTGGATTTAGTCT...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp AAACTCCATTTTCTTCTCCATGGGCATTTGCCTCGGCCATATCTGTACCATCCAATCTCGAGTGGAAGATaGTTCATCAGTTACCTGCTT +
Preference number: 4 (lower is better)
Translates to: KLHFLLHGHLPRPYLYHPISSGR*FISYLL
Trigger: AAGCAGGTAACTGATGAAGCATCTTCCACTCGAGAT...TGGATGGTACAGATATGGCCGAGGCAAATGCCCATGGAGAAGAAAATGGAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp TGTCTTTATACACCTCAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATGGTAAACTCTCCTTCTaGCAGTCGCTGTTTCCACCC +
Preference number: 4 (lower is better)
Translates to: CLYTPQAYAYLIGGGLGNGKLSF*QSLFPP
Trigger: GGGTGGAAACAGCGACTGGCAGAAGGAGAGTTTACC...ATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTGAGGTGTATAAAGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp GAATATCCAAGGTCCAGCAGTCAACTAAACTTTCTATATAGCTCATCCCAGAAAGGTAAACTCTCCTTCTaGCAGTCGCTGTTTCCACCC +
Preference number: 4 (lower is better)
Translates to: EYPRSSSQLNFLYSSSQKGKLSF*QSLFPP
Trigger: GGGTGGAAACAGCGACTGGCAGAAGGAGAGTTTACC...TTTCTGGGATGAGCTATATAGAAAGTTTAGTTGACTGCTGGACCTTGGATATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp TTCATCCTGGCATTCACAGATACTAGTCTCTACCTCTTCTGCAATTTCCTCCTGTGCCTTATCCGCAACTaGATTTCTGGGGTAAACTCT +
Preference number: 4 (lower is better)
Translates to: FILAFTDTSLYLFCNFLLCLIRN*ISGVNS
Trigger: AGAGTTTACCCCAGAAATGCAGTTGCGGATAAGGCA...CAGGAGGAAATTGCAGAAGAGGTAGAGACTAGTATCTGTGAATGCCAGGATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp GGATTGACAATAATGACACCAGTCGAACCTTCCATTTTTGTTTCAGGGGTAGAAGAAGACTCATCTTTCTaGGGGGAGAGTGGCTCTTCA +
Preference number: 4 (lower is better)
Translates to: GLTIMTPVEPSIFVSGVEEDSSF*GESGSS
Trigger: TGAAGAGCCACTCTCCCCGCAGAAAGATGAGTCTTC...TTCTACCCCTGAAACAAAAATGGAAGGTTCGACTGGTGTCATTATTGTCAATCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp AACAAAATGTTGTCTCAAGGGAGGCTGGAGTACATGATTCTTCTGATGTGGACTAGATGTGCTAGTGGATaGTCGAGACTCAGGTTTGGA +
Preference number: 4 (lower is better)
Translates to: NKMLSQGRLEYMILLMWTRCASG*SRLRFG
Trigger: TCCAAACCTGAGTCTCGAGCATCCACTAGCACATCT...AGTCCACATCAGAAGAATCATGTACTCCAGCCTCCCTTGAGACAACATTTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp GGGGTTCTTCATGAGAATTGGTTAGACTTTCAGCCTCCTCAGAAAATTCAGGTACTGCTCTTTGATGTGTaGCAGAGTTCTCGTCTTTCC +
Preference number: 4 (lower is better)
Translates to: GVLHENWLDFQPPQKIQVLLFDV*QSSRLS
Trigger: GGAAAGACGAGAACTCTGGCACACATCAAAGAGCAG...TACCTGAATTTTCTGAGGAGGCTGAAAGTCTAACCAATTCTCATGAAGAACCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACACTTGGGTTAAGAGACTaGTGTAGTACAGTGGTGGTC +
Preference number: 4 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTLGLRD*CSTVVV
Trigger: GACCACCACTGTACTACAGCAGTCTCTTAACCCAAG...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp TGCATAACCACTTTAACTCATTCCTCTCATTCTCCTTACACATCTGCATTTCCGGTTTCCAGTAAACATTaGGACGGTCGGGTGTGCAAC +
Preference number: 4 (lower is better)
Translates to: CITTLTHSSHSPYTSAFPVSSKH*DGRVCN
Trigger: GTTGCACACCCGACCGTCGCAATGTTTACTGGAAAC...CGGAAATGCAGATGTGTAAGGAGAATGAGAGGAATGAGTTAAAGTGGTTATGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp AATATATGGAATGTAGCTCAAATACTCAACACGCAGACTTTACTGGATGCACACCCAGAGGCTGTCCTGTaGTCCTCATCCCATCATCAT +
Preference number: 4 (lower is better)
Translates to: NIWNVAQILNTQTLLDAHPEAVL*SSSHHH
Trigger: ATGATGATGGGATGAGGAGCACAGGACAGCCTCTGG...GTGTGCATCCAGTAAAGTCTGCGTGTTGAGTATTTGAGCTACATTCCATATATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTTTGCCCTGTAGTAACTaGGTCACCAGCGGATTGTTA +
Preference number: 4 (lower is better)
Translates to: FKKIWPTSARSEARMNGCLPCSN*VTSGLL
Trigger: TAACAATCCGCTGGTGACGCAGTTACTACAGGGCAA...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp TGCATAACCACTTTAACTCATTCCTCTCATTCTCCTTACACATCTGCATTTCCGCCTGTTGAAGGCAAATaGATTACACCCCACTGGGGT +
Preference number: 4 (lower is better)
Translates to: CITTLTHSSHSPYTSAFPPVEGK*ITPHWG
Trigger: ACCCCAGTGGGGTGTAATGCATTTGCCTTCAACAGG...CGGAAATGCAGATGTGTAAGGAGAATGAGAGGAATGAGTTAAAGTGGTTATGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTATTCAATTGCAGATGCTaGCCTTTTGAAACTCGTGCT +
Preference number: 4 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVFNCRC*PFETRA
Trigger: AGCACGAGTTTCAAAAGGGCAGCATCTGCAATTGAA...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACAGTTTTGAAGGACCTATaGAGTCGTCATGGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTVLKDL*SRHGRR
Trigger: CCTTCTGCCATGACGACTGCATAGGTCCTTCAAAAC...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp TGCATAACCACTTTAACTCATTCCTCTCATTCTCCTTACACATCTGCATTTCCGCACTGGAACTTATGCTaGTTTCCTCGGGTAAGGCTG +
Preference number: 4 (lower is better)
Translates to: CITTLTHSSHSPYTSAFPHWNLC*FPRVRL
Trigger: CAGCCTTACCCGAGGAAAGCAGCATAAGTTCCAGTG...CGGAAATGCAGATGTGTAAGGAGAATGAGAGGAATGAGTTAAAGTGGTTATGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp TATCTTCAGGAGGTGCTATTTGGGGTTCTTCATGAGAATTGGTTAGACTTTCAGCCGCAACTGCATTTCTaGGGTAAACTCTCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: YLQEVLFGVLHENWLDFQPQLHF*GKLSFC
Trigger: GCAGAAGGAGAGTTTACCCCAGAAATGCAGTTGCGG...CTGAAAGTCTAACCAATTCTCATGAAGAACCCCAAATAGCACCTCCTGAAGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTCCGCAACTGCATTTCTaGGGTAAACTCTCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPPQLHF*GKLSFC
Trigger: GCAGAAGGAGAGTTTACCCCAGAAATGCAGTTGCGG...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTAGCTCCAGCGTTGTTTaGTCCAGTAGTGAGCTTCAC +
Preference number: 4 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPSSSVV*SSSELH
Trigger: GTGAAGCTCACTACTGGACCAAACAACGCTGGAGCT...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACAACAGAAACCAGGCTCTaGAGAAGCTGGGCTTTTCAT +
Preference number: 4 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTTETRL*RSWAFH
Trigger: ATGAAAAGCCCAGCTTCTCCAGAGCCTGGTTTCTGT...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp GGAAGTTTACTTGGGTTAAGAGACTGCTGTAGTACAGTGGTGGTCTCCCGGAGGCATTATATCTTTAGGTaGAATTTCTACCATAGGGCA +
Preference number: 4 (lower is better)
Translates to: GSLLGLRDCCSTVVVSRRHYIFR*NFYHRA
Trigger: TGCCCTATGGTAGAAATTCCACCTAAAGATATAATG...CCTCCGGGAGACCACCACTGTACTACAGCAGTCTCTTAACCCAAGTAAACTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp CCATCAGGTGACTTGGAGGGCTCTGATGACTTGGAAGTATGTGAGGTTTCTAACGTTCTTCATGAGAATTaGTTAGACTTTCAGCCTCCT +
Preference number: 4 (lower is better)
Translates to: PSGDLEGSDDLEVCEVSNVLHEN*LDFQPP
Trigger: AGGAGGCTGAAAGTCTAACCAATTCTCATGAAGAAC...GTTAGAAACCTCACATACTTCCAAGTCATCAGAGCCCTCCAAGTCACCTGATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp ACAATGAAGGAACTGATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCTTTCTGCGGGGAGAGTaGCTCTTCAGATACAGAAGG +
Preference number: 4 (lower is better)
Translates to: TMKELIMSSVSHQPQLYLFLRGE*LFRYRR
Trigger: CCTTCTGTATCTGAAGAGCCACTCTCCCCGCAGAAA...GAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTATCAGTTCCTTCATTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp TGGATTGACAATAATGACACCAGTCGAACCTTCCATTTTTGTTTCAGGGGTAGACCAGAGGTTTGGCAGTaGCGGAAGACTCATCTTTCT +
Preference number: 4 (lower is better)
Translates to: WIDNNDTSRTFHFCFRGRPEVWQ*RKTHLS
Trigger: AGAAAGATGAGTCTTCCGCCACTGCCAAACCTCTGG...TCTACCCCTGAAACAAAAATGGAAGGTTCGACTGGTGTCATTATTGTCAATCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp ACAATGAAGGAACTGATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCCCAGAGGTTTGGCAGTaGCGGAAGACTCATCTTTCT +
Preference number: 4 (lower is better)
Translates to: TMKELIMSSVSHQPQLYLPEVWQ*RKTHLS
Trigger: AGAAAGATGAGTCTTCCGCCACTGCCAAACCTCTGG...GAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTATCAGTTCCTTCATTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp TGCATAACCACTTTAACTCATTCCTCTCATTCTCCTTACACATCTGCATTTCCGGACAGATTCTTCTGCTaGGAGGTAAGGTTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: CITTLTHSSHSPYTSAFPDRFFC*EVRFSP
Trigger: GGGAGAGAACCTTACCTCCCAGCAGAAGAATCTGTC...CGGAAATGCAGATGTGTAAGGAGAATGAGAGGAATGAGTTAAAGTGGTTATGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp TATCTTCAGGAGGTGCTATTTGGGGTTCTTCATGAGAATTGGTTAGACTTTCAGGACAGATTCTTCTGCTaGGAGGTAAGGTTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: YLQEVLFGVLHENWLDFQDRFFC*EVRFSP
Trigger: GGGAGAGAACCTTACCTCCCAGCAGAAGAATCTGTC...CTGAAAGTCTAACCAATTCTCATGAAGAACCCCAAATAGCACCTCCTGAAGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTAAGGGCTCTGATGACTTaGAAGTATGTGAGGTTTCTA +
Preference number: 4 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVRALMT*KYVRFL
Trigger: TAGAAACCTCACATACTTCCAAGTCATCAGAGCCCT...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp GAATATCCAAGGTCCAGCAGTCAACTAAACTTTCTATATAGCTCATCCCAGAAATCCCATCAGGTGACTTaGAGGGCTCTGATGACTTGG +
Preference number: 4 (lower is better)
Translates to: EYPRSSSQLNFLYSSSQKSHQVT*RALMTW
Trigger: CCAAGTCATCAGAGCCCTCCAAGTCACCTGATGGGA...TTTCTGGGATGAGCTATATAGAAAGTTTAGTTGACTGCTGGACCTTGGATATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp AATATATGGAATGTAGCTCAAATACTCAACACGCAGACTTTACTGGATGCACACTCCCATCAGGTGACTTaGAGGGCTCTGATGACTTGG +
Preference number: 4 (lower is better)
Translates to: NIWNVAQILNTQTLLDAHSHQVT*RALMTW
Trigger: CCAAGTCATCAGAGCCCTCCAAGTCACCTGATGGGA...GTGTGCATCCAGTAAAGTCTGCGTGTTGAGTATTTGAGCTACATTCCATATATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp TCACTCTGTAGCTCCATATCTATAGCAATTCCTTCATTTGGAAACTGGCCTTCTGTCTCTTTAGAGGTCTaGAAGAGATGGGCTCGAGCT +
Preference number: 4 (lower is better)
Translates to: SLCSSISIAIPSFGNWPSVSLEV*KRWARA
Trigger: AGCTCGAGCCCATCTCTTCCAGACCTCTAAAGAGAC...AGAAGGCCAGTTTCCAAATGAAGGAATTGCTATAGATATGGAGCTACAGAGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp ACAATGAAGGAACTGATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCGTCTCTTTAGAGGTCTaGAAGAGATGGGCTCGAGCT +
Preference number: 4 (lower is better)
Translates to: TMKELIMSSVSHQPQLYLVSLEV*KRWARA
Trigger: AGCTCGAGCCCATCTCTTCCAGACCTCTAAAGAGAC...GAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTATCAGTTCCTTCATTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp AGCACAGAAACCAGGCTCTGGAGAAGCTGGGCTTTTCATGCTTTTTGGCTGTTGAGGAGATCTACAGTTTaGATTGACAATAATGACACC +
Preference number: 4 (lower is better)
Translates to: STETRLWRSWAFHAFWLLRRSTV*IDNNDT
Trigger: GGTGTCATTATTGTCAATCCAAACTGTAGATCTCCT...CAACAGCCAAAAAGCATGAAAAGCCCAGCTTCTCCAGAGCCTGGTTTCTGTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTAGTTGTTAATTCCCATTaGGGGAATCAAGACAGAGCT +
Preference number: 4 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVVVNSH*GNQDRA
Trigger: AGCTCTGTCTTGATTCCCCCAATGGGAATTAACAAC...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp TGCATAACCACTTTAACTCATTCCTCTCATTCTCCTTACACATCTGCATTTCCGGAATTGATCGGTTTATaGCTGCTGGTGCAAAGCCCC +
Preference number: 4 (lower is better)
Translates to: CITTLTHSSHSPYTSAFPELIGL*LLVQSP
Trigger: GGGGCTTTGCACCAGCAGCCATAAACCGATCAATTC...CGGAAATGCAGATGTGTAAGGAGAATGAGAGGAATGAGTTAAAGTGGTTATGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp AATATATGGAATGTAGCTCAAATACTCAACACGCAGACTTTACTGGATGCACACCAGTCAGAGACAAACTaGAGGTCAGCGTGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: NIWNVAQILNTQTLLDAHQSETN*RSAWCC
Trigger: ACAGCACCACGCTGACCTCCAGTTTGTCTCTGACTG...GTGTGCATCCAGTAAAGTCTGCGTGTTGAGTATTTGAGCTACATTCCATATATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp GAATATCCAAGGTCCAGCAGTCAACTAAACTTTCTATATAGCTCATCCCAGAAAACCTTCGTTGGCAACTaGCTCAGGCCTGCTAATCAC +
Preference number: 4 (lower is better)
Translates to: EYPRSSSQLNFLYSSSQKTFVGN*LRPANH
Trigger: GTGATTAGCAGGCCTGAGCCAGTTGCCAACGAAGGT...TTTCTGGGATGAGCTATATAGAAAGTTTAGTTGACTGCTGGACCTTGGATATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp TGTCTTTATACACCTCAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATGATCTATACCTTCGTTaGCAACTGGCTCAGGCCTGC +
Preference number: 4 (lower is better)
Translates to: CLYTPQAYAYLIGGGLGNDLYLR*QLAQAC
Trigger: GCAGGCCTGAGCCAGTTGCCAACGAAGGTATAGATC...ATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTGAGGTGTATAAAGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp ACAATGAAGGAACTGATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCTCTCGCTTTCTCATTTaGAGTGGTGCCAGAGTCCCT +
Preference number: 4 (lower is better)
Translates to: TMKELIMSSVSHQPQLYLSRFLI*SGARVP
Trigger: AGGGACTCTGGCACCACTCCAAATGAGAAAGCGAGA...GAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTATCAGTTCCTTCATTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACATATGCCCGTGGACTGTaGCCAACTAAGTCTCTTAGT +
Preference number: 4 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTYARGL*PTKSLS
Trigger: ACTAAGAGACTTAGTTGGCCACAGTCCACGGGCATA...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTTATGCCCGTGGACTGTaGCCAACTAAGTCTCTTAGT +
Preference number: 4 (lower is better)
Translates to: FKKIWPTSARSEARMNGCYARGL*PTKSLS
Trigger: ACTAAGAGACTTAGTTGGCCACAGTCCACGGGCATA...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp AATATATGGAATGTAGCTCAAATACTCAACACGCAGACTTTACTGGATGCACACAGCCTGTGGCAGGATTaGAGCCACTTCCCAAAATCC +
Preference number: 4 (lower is better)
Translates to: NIWNVAQILNTQTLLDAHSLWQD*SHFPKS
Trigger: GGATTTTGGGAAGTGGCTCCAATCCTGCCACAGGCT...GTGTGCATCCAGTAAAGTCTGCGTGTTGAGTATTTGAGCTACATTCCATATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp ACAATGAAGGAACTGATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCCACCCCAACACAACCTaGCAGGCAGTGAAGAGAAAA +
Preference number: 4 (lower is better)
Translates to: TMKELIMSSVSHQPQLYLHPNTT*QAVKRK
Trigger: TTTTCTCTTCACTGCCTGCCAGGTTGTGTTGGGGTG...GAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTATCAGTTCCTTCATTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR CAA 72 bp GCTTCGAACAAACTCCATTTTCTTCTCCATGGGCATTaGCCTCGGCCATATCTGTACCATCCAATTCAGATT +
Preference number: 4 (lower is better)
Translates to: ASNKLHFLLHGH*PRPYLYHPIQI
Trigger: AATCTGAATTGGATGGTACAGATATGGCCGAGGCAAATGCCCATGGAGAAGAAAATGGAGTTTGTTCGAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp ACAATGAAGGAACTGATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCGAGAGCATAGAGGCCTaGCTTTCCAGGGATTTTGAA +
Preference number: 4 (lower is better)
Translates to: TMKELIMSSVSHQPQLYLESIEA*LSRDFE
Trigger: TTCAAAATCCCTGGAAAGTCAGGCCTCTATGCTCTC...GAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTATCAGTTCCTTCATTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTGAGAGCATAGAGGCCTaGCTTTCCAGGGATTTTGAA +
Preference number: 4 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPESIEA*LSRDFE
Trigger: TTCAAAATCCCTGGAAAGTCAGGCCTCTATGCTCTC...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp TCTTTAGGTGGAATTTCTACCATAGGGCAAAGAGTAGCACAGAAACCAGGCTCTTTAGAGCTGAAGTACTaGGGCGTAAAATTCCATCAC +
Preference number: 4 (lower is better)
Translates to: SLGGISTIGQRVAQKPGSLELKY*GVKFHH
Trigger: GTGATGGAATTTTACGCCTCAGTACTTCAGCTCTAA...AGAGCCTGGTTTCTGTGCTACTCTTTGCCCTATGGTAGAAATTCCACCTAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp ACCTTTAATGGTGTCAAAACAACACGAGGAACAGTCTTGTTTACCATCATTGAGCACAGATTCCTCTCTTaGCATGCCCAGCTTTTCTCC +
Preference number: 4 (lower is better)
Translates to: TFNGVKTTRGTVLFTIIEHRFLS*HAQLFS
Trigger: GGAGAAAAGCTGGGCATGTCAAGAGAGGAATCTGTG...CTCAATGATGGTAAACAAGACTGTTCCTCGTGTTGTTTTGACACCATTAAAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTCATGAAGAACTACTTTaGGCTCCAGCGTTGTTTGGT +
Preference number: 4 (lower is better)
Translates to: FKKIWPTSARSEARMNGCHEELL*APALFG
Trigger: ACCAAACAACGCTGGAGCTCAAAGTAGTTCTTCATG...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp TTCATCCTGGCATTCACAGATACTAGTCTCTACCTCTTCTGCAATTTCCTCCTGTCTGCAATTTCCTCCTaGATTACAGATTCTTCAGGG +
Preference number: 4 (lower is better)
Translates to: FILAFTDTSLYLFCNFLLSAISS*ITDSSG
Trigger: CCCTGAAGAATCTGTAATTCAGGAGGAAATTGCAGA...CAGGAGGAAATTGCAGAAGAGGTAGAGACTAGTATCTGTGAATGCCAGGATGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp AAGAGTAGCACAGAAACCAGGCTCTGGAGAAGCTGGGCTTTTCATGCTTTTTGGTCACAGACTTCTAACTaGTCGATAACAACTGTCATT +
Preference number: 4 (lower is better)
Translates to: KSSTETRLWRSWAFHAFWSQTSN*SITTVI
Trigger: AATGACAGTTGTTATCGATCAGTTAGAAGTCTGTGA...CCAAAAAGCATGAAAAGCCCAGCTTCTCCAGAGCCTGGTTTCTGTGCTACTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp GATGACTTGGAAGTATGTGAGGTTTCTAACCGACTCTGTGTACTCCCTTGCTTATCTGTGTCACTGACATaGGTCATAGATGAAGTGGAA +
Preference number: 4 (lower is better)
Translates to: DDLEVCEVSNRLCVLPCLSVSLT*VIDEVE
Trigger: TTCCACTTCATCTATGACTCATGTCAGTGACACAGA...TAAGCAAGGGAGTACACAGAGTCGGTTAGAAACCTCACATACTTCCAAGTCATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp GAATATCCAAGGTCCAGCAGTCAACTAAACTTTCTATATAGCTCATCCCAGAAAAAGTGGTCTCAGAGGTaGGAAGCATGGAAGACACTG +
Preference number: 4 (lower is better)
Translates to: EYPRSSSQLNFLYSSSQKKWSQR*EAWKTL
Trigger: CAGTGTCTTCCATGCTTCTCACCTCTGAGACCACTT...TTTCTGGGATGAGCTATATAGAAAGTTTAGTTGACTGCTGGACCTTGGATATTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp GAATATCCAAGGTCCAGCAGTCAACTAAACTTTCTATATAGCTCATCCCAGAAAAGCAAGTTCTGGAATTaGAGCAGGGTAGGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: EYPRSSSQLNFLYSSSQKSKFWN*SRVGLL
Trigger: GAGAAGCCCTACCCTGCTTCAATTCCAGAACTTGCT...TTTCTGGGATGAGCTATATAGAAAGTTTAGTTGACTGCTGGACCTTGGATATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp GGGGTTCTTCATGAGAATTGGTTAGACTTTCAGCCTCCTCAGAAAATTCAGGTAATGTTCCGGGTTGACTaGTCATCTTCTATCCTAGCT +
Preference number: 4 (lower is better)
Translates to: GVLHENWLDFQPPQKIQVMFRVD*SSSILA
Trigger: AGCTAGGATAGAAGATGATCAGTCAACCCGGAACAT...TACCTGAATTTTCTGAGGAGGCTGAAAGTCTAACCAATTCTCATGAAGAACCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTCCAATTTTGGAAAGCTaGATCTTGAGAGGGGGAACC +
Preference number: 4 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPPILES*ILRGGT
Trigger: GGTTCCCCCTCTCAAGATTCAGCTTTCCAAAATTGG...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp TGCATAACCACTTTAACTCATTCCTCTCATTCTCCTTACACATCTGCATTTCCGAGATGGGCTCGAGCTTaGTGCTTTGCAAAGAGCTTA +
Preference number: 4 (lower is better)
Translates to: CITTLTHSSHSPYTSAFPRWARA*CFAKSL
Trigger: TAAGCTCTTTGCAAAGCATCAAGCTCGAGCCCATCT...CGGAAATGCAGATGTGTAAGGAGAATGAGAGGAATGAGTTAAAGTGGTTATGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp GAATATCCAAGGTCCAGCAGTCAACTAAACTTTCTATATAGCTCATCCCAGAAAGCCCTCTGTAGTGGCTaGAATGGGAGTGCTTTCAAT +
Preference number: 4 (lower is better)
Translates to: EYPRSSSQLNFLYSSSQKALCSG*NGSAFN
Trigger: ATTGAAAGCACTCCCATTTCAGCCACTACAGAGGGC...TTTCTGGGATGAGCTATATAGAAAGTTTAGTTGACTGCTGGACCTTGGATATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp GAATATCCAAGGTCCAGCAGTCAACTAAACTTTCTATATAGCTCATCCCAGAAAATCATCCATGGAGCTTaGTATGCTGGAGCCCTCTGT +
Preference number: 4 (lower is better)
Translates to: EYPRSSSQLNFLYSSSQKIIHGA*YAGALC
Trigger: ACAGAGGGCTCCAGCATATCAAGCTCCATGGATGAT...TTTCTGGGATGAGCTATATAGAAAGTTTAGTTGACTGCTGGACCTTGGATATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp TGCATAACCACTTTAACTCATTCCTCTCATTCTCCTTACACATCTGCATTTCCGCTGCCGAAGCAGCAATaGAAGTGGAACTGTGATCTA +
Preference number: 4 (lower is better)
Translates to: CITTLTHSSHSPYTSAFPLPKQQ*KWNCDL
Trigger: TAGATCACAGTTCCACTTTCATTGCTGCTTCGGCAG...CGGAAATGCAGATGTGTAAGGAGAATGAGAGGAATGAGTTAAAGTGGTTATGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp AATATATGGAATGTAGCTCAAATACTCAACACGCAGACTTTACTGGATGCACACTTACTTGAACCCGAGTaGGTAACCAGAGGCTGTCCT +
Preference number: 4 (lower is better)
Translates to: NIWNVAQILNTQTLLDAHLLEPE*VTRGCP
Trigger: AGGACAGCCTCTGGTTACTCACTCGGGTTCAAGTAA...GTGTGCATCCAGTAAAGTCTGCGTGTTGAGTATTTGAGCTACATTCCATATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTATTCTTTTTGTTTACTTaGACCCGAGTGAGTAACCAG +
Preference number: 4 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVFFLFT*TRVSNQ
Trigger: CTGGTTACTCACTCGGGTTCAAGTAAACAAAAAGAA...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp TGTCTTTATACACCTCAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATCCTGGGATGAAGTTCTaGCACGTTCAAGTAGTTGGC +
Preference number: 4 (lower is better)
Translates to: CLYTPQAYAYLIGGGLGNPGMKF*HVQVVG
Trigger: GCCAACTACTTGAACGTGTCAGAACTTCATCCCAGG...ATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTGAGGTGTATAAAGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp ACAATGAAGGAACTGATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCCCCTTGTCTGCTTCGTaGAGTTCAGATTTCACAGGA +
Preference number: 4 (lower is better)
Translates to: TMKELIMSSVSHQPQLYLPLSAS*SSDFTG
Trigger: TCCTGTGAAATCTGAACTTCACGAAGCAGACAAGGG...GAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTATCAGTTCCTTCATTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTCTCTTCCATGGGACTTaGGGTGGAAGCTTTCATGTT +
Preference number: 4 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPLFHGT*GGSFHV
Trigger: AACATGAAAGCTTCCACCTCAAGTCCCATGGAAGAG...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTTTGACCTCAGGGCTGTaGACAATTCTGTTCTGCATG +
Preference number: 4 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPLTSGL*TILFCM
Trigger: CATGCAGAACAGAATTGTTCACAGCCCTGAGGTCAA...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTACTGGAGGTTGTTTTTaGTCAGATGGGACTTCTGCA +
Preference number: 4 (lower is better)
Translates to: FKKIWPTSARSEARMNGCTGGCF*SDGTSA
Trigger: TGCAGAAGTCCCATCTGATCAAAAACAACCTCCAGT...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTCAGATGCTGCCCTTTTaGAACTCGTGCTACCAAAGT +
Preference number: 4 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPQMLPF*NSCYQS
Trigger: ACTTTGGTAGCACGAGTTTCAAAAGGGCAGCATCTG...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACATGCTACACAAAGTTTTaGAGGACCTATGCAGTCGTC +
Preference number: 4 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTCYTKF*RTYAVV
Trigger: GACGACTGCATAGGTCCTTCAAAACTTTGTGTAGCA...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTTGCTACACAAAGTTTTaGAGGACCTATGCAGTCGTC +
Preference number: 4 (lower is better)
Translates to: FKKIWPTSARSEARMNGCCYTKF*RTYAVV
Trigger: GACGACTGCATAGGTCCTTCAAAACTTTGTGTAGCA...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTTTCTGCCATAGTCTCTaGGAAAGTACAACAGGAGGA +
Preference number: 4 (lower is better)
Translates to: FKKIWPTSARSEARMNGCFCHSL*ESTTGG
Trigger: TCCTCCTGTTGTACTTTCTCAGAGACTATGGCAGAA...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACATTCTGCCATAGTCTCTaGGAAAGTACAACAGGAGGA +
Preference number: 4 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTFCHSL*ESTTGG
Trigger: TCCTCCTGTTGTACTTTCTCAGAGACTATGGCAGAA...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp AATATATGGAATGTAGCTCAAATACTCAACACGCAGACTTTACTGGATGCACACCCAGATTGCTGGGCATaGGTCCCATGCAATTTCAGA +
Preference number: 4 (lower is better)
Translates to: NIWNVAQILNTQTLLDAHPDCWA*VPCNFR
Trigger: TCTGAAATTGCATGGGACTCATGCCCAGCAATCTGG...GTGTGCATCCAGTAAAGTCTGCGTGTTGAGTATTTGAGCTACATTCCATATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp GAATATCCAAGGTCCAGCAGTCAACTAAACTTTCTATATAGCTCATCCCAGAAAAACCTCTGCAAGGTCTaGAGCCAGAATGAATGGGTG +
Preference number: 4 (lower is better)
Translates to: EYPRSSSQLNFLYSSSQKNLCKV*SQNEWV
Trigger: CACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTT...TTTCTGGGATGAGCTATATAGAAAGTTTAGTTGACTGCTGGACCTTGGATATTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp AATATATGGAATGTAGCTCAAATACTCAACACGCAGACTTTACTGGATGCACACAACCTCTGCAAGGTCTaGAGCCAGAATGAATGGGTG +
Preference number: 4 (lower is better)
Translates to: NIWNVAQILNTQTLLDAHNLCKV*SQNEWV
Trigger: CACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTT...GTGTGCATCCAGTAAAGTCTGCGTGTTGAGTATTTGAGCTACATTCCATATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp TGTCTTTATACACCTCAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATGGCTGTCCTCTGGTATaGGGGTGGCCAAAATATATG +
Preference number: 4 (lower is better)
Translates to: CLYTPQAYAYLIGGGLGNGCPLV*GWPKYM
Trigger: CATATATTTTGGCCACCCTCATACCAGAGGACAGCC...ATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTGAGGTGTATAAAGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp AATATATGGAATGTAGCTCAAATACTCAACACGCAGACTTTACTGGATGCACACGGCTGTCCTCTGGTATaGGGGTGGCCAAAATATATG +
Preference number: 4 (lower is better)
Translates to: NIWNVAQILNTQTLLDAHGCPLV*GWPKYM
Trigger: CATATATTTTGGCCACCCTCATACCAGAGGACAGCC...GTGTGCATCCAGTAAAGTCTGCGTGTTGAGTATTTGAGCTACATTCCATATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp ACAATGAAGGAACTGATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCTCTTCGAAATCAGGATaGTATCAGAGCCAGGCAGAC +
Preference number: 4 (lower is better)
Translates to: TMKELIMSSVSHQPQLYLSSKSG*YQSQAD
Trigger: GTCTGCCTGGCTCTGATATCATCCTGATTTCGAAGA...GAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTATCAGTTCCTTCATTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp AATATATGGAATGTAGCTCAAATACTCAACACGCAGACTTTACTGGATGCACACAGGCCCCTGACAGTCTaGTTCAGAGTTCCTGTTCTA +
Preference number: 4 (lower is better)
Translates to: NIWNVAQILNTQTLLDAHRPLTV*FRVPVL
Trigger: TAGAACAGGAACTCTGAATCAGACTGTCAGGGGCCT...GTGTGCATCCAGTAAAGTCTGCGTGTTGAGTATTTGAGCTACATTCCATATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTATCTTTGGTAGAGGACTaGAGGAGGATTTTACTTTTC +
Preference number: 4 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVSLVED*RRILLF
Trigger: GAAAAGTAAAATCCTCCTTCAGTCCTCTACCAAAGA...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACAAACTGCTCCCCCTTCTaGGGATTTTACACACCTTTT +
Preference number: 4 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTNCSPF*GFYTPF
Trigger: AAAAGGTGTGTAAAATCCTCAGAAGGGGGAGCAGTT...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp CTGATGACTTGGAAGTATGTGAGGTTTCTAACCGACTCTGTGTACTCCCTTGCTATGACTTCCAATATCTaGTTTGCTGTCATTGGTGAG +
Preference number: 4 (lower is better)
Translates to: LMTWKYVRFLTDSVYSLAMTSNI*FAVIGE
Trigger: CTCACCAATGACAGCAAAGCAGATATTGGAAGTCAT...AGCAAGGGAGTACACAGAGTCGGTTAGAAACCTCACATACTTCCAAGTCATCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp ATTGACAATAATGACACCAGTCGAACCTTCCATTTTTGTTTCAGGGGTAGAAGAAGACTAAATCCAACGTaGCATCTGCTGGGCATGACG +
Preference number: 4 (lower is better)
Translates to: IDNNDTSRTFHFCFRGRRRLNPT*HLLGMT
Trigger: CGTCATGCCCAGCAGATGGCACGTTGGATTTAGTCT...TCTTCTACCCCTGAAACAAAAATGGAAGGTTCGACTGGTGTCATTATTGTCAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp ACAGATACTAGTCTCTACCTCTTCTGCAATTTCCTCCTGAATTACAGATTCTTCAGACTAAATCCAACGTaGCATCTGCTGGGCATGACG +
Preference number: 4 (lower is better)
Translates to: TDTSLYLFCNFLLNYRFFRLNPT*HLLGMT
Trigger: CGTCATGCCCAGCAGATGGCACGTTGGATTTAGTCT...GAAGAATCTGTAATTCAGGAGGAAATTGCAGAAGAGGTAGAGACTAGTATCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp AATATATGGAATGTAGCTCAAATACTCAACACGCAGACTTTACTGGATGCACACAGACTAAATCCAACGTaGCATCTGCTGGGCATGACG +
Preference number: 4 (lower is better)
Translates to: NIWNVAQILNTQTLLDAHRLNPT*HLLGMT
Trigger: CGTCATGCCCAGCAGATGGCACGTTGGATTTAGTCT...GTGTGCATCCAGTAAAGTCTGCGTGTTGAGTATTTGAGCTACATTCCATATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp GAATATCCAAGGTCCAGCAGTCAACTAAACTTTCTATATAGCTCATCCCAGAAATTCTCCATGGGCATTTaGCTCGGCCATATCTGTACC +
Preference number: 4 (lower is better)
Translates to: EYPRSSSQLNFLYSSSQKFSMGI*LGHICT
Trigger: GGTACAGATATGGCCGAGGCAAATGCCCATGGAGAA...TTTCTGGGATGAGCTATATAGAAAGTTTAGTTGACTGCTGGACCTTGGATATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp AATATATGGAATGTAGCTCAAATACTCAACACGCAGACTTTACTGGATGCACACTTCTCCATGGGCATTTaGCTCGGCCATATCTGTACC +
Preference number: 4 (lower is better)
Translates to: NIWNVAQILNTQTLLDAHFSMGI*LGHICT
Trigger: GGTACAGATATGGCCGAGGCAAATGCCCATGGAGAA...GTGTGCATCCAGTAAAGTCTGCGTGTTGAGTATTTGAGCTACATTCCATATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp CGGAGGTGGGCAGACTTGTTGCTAGGAGATCTACAGTTTGGATTGACAATAATGGCTTCATCAGTTACCTaGTTCGAACAAACTCCATTT +
Preference number: 4 (lower is better)
Translates to: RRWADLLLGDLQFGLTIMASSVT*FEQTPF
Trigger: AAATGGAGTTTGTTCGAAGCAGGTAACTGATGAAGC...CATTATTGTCAATCCAAACTGTAGATCTCCTAGCAACAAGTCTGCCCACCTCCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp ACGTTTCAGAGATGCAGGCATTTTCTGAAAGCTGTTCTTCAGGGTCACTCTGTACTTCTTTTCTGCTGCTaGCTCAAAGCCTGTTTAAGA +
Preference number: 4 (lower is better)
Translates to: TFQRCRHFLKAVLQGHSVLLFCC*LKACLR
Trigger: TCTTAAACAGGCTTTGAGGCAGCAGCAGAAAAGAAG...TACAGAGTGACCCTGAAGAACAGCTTTCAGAAAATGCCTGCATCTCTGAAACGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACATGCCTTATCCGCAACTaGATTTCTGGGGTAAACTCT +
Preference number: 4 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTCLIRN*ISGVNS
Trigger: AGAGTTTACCCCAGAAATGCAGTTGCGGATAAGGCA...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp CAGGTATGTTTTCATCAGAACTATGCACAGATAAGTCAGTGGCAGTTTCTGGAATTTTGGCTGTTGTTCTaGCAAGGCTGTCTGTGCAGA +
Preference number: 4 (lower is better)
Translates to: QVCFHQNYAQISQWQFLEFWLLF*QGCLCR
Trigger: TCTGCACAGACAGCCTTGGCAGAACAACAGCCAAAA...TTCCAGAAACTGCCACTGACTTATCTGTGCATAGTTCTGATGAAAACATACCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp TCTCTGAATCTCTACTTTCATTTCTTATCCCATCAGGTGACTTGGAGGGCTCTGGTTATCTTCAGGAGGTaGTATTTGGGGTTCTTCATG +
Preference number: 4 (lower is better)
Translates to: SLNLYFHFLSHQVTWRALVIFRR*YLGFFM
Trigger: CATGAAGAACCCCAAATAGCACCTCCTGAAGATAAC...CAGAGCCCTCCAAGTCACCTGATGGGATAAGAAATGAAAGTAGAGATTCAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp GATGACTTGGAAGTATGTGAGGTTTCTAACCGACTCTGTGTACTCCCTTGCTTAGTTATCTTCAGGAGGTaGTATTTGGGGTTCTTCATG +
Preference number: 4 (lower is better)
Translates to: DDLEVCEVSNRLCVLPCLVIFRR*YLGFFM
Trigger: CATGAAGAACCCCAAATAGCACCTCCTGAAGATAAC...TAAGCAAGGGAGTACACAGAGTCGGTTAGAAACCTCACATACTTCCAAGTCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp AAGAGTAGCACAGAAACCAGGCTCTGGAGAAGCTGGGCTTTTCATGCTTTTTGGATTCCAAAGCTGTGTTaGTCTGCAGTTTTTCTCTTT +
Preference number: 4 (lower is better)
Translates to: KSSTETRLWRSWAFHAFWIPKLC*SAVFLF
Trigger: AAAGAGAAAAACTGCAGAGCAACACAGCTTTGGAAT...CCAAAAAGCATGAAAAGCCCAGCTTCTCCAGAGCCTGGTTTCTGTGCTACTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp ACAATGAAGGAACTGATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCAGATGTGCTAGTGGATaGTCGAGACTCAGGTTTGGA +
Preference number: 4 (lower is better)
Translates to: TMKELIMSSVSHQPQLYLRCASG*SRLRFG
Trigger: TCCAAACCTGAGTCTCGAGCATCCACTAGCACATCT...GAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTATCAGTTCCTTCATTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp TGCATAACCACTTTAACTCATTCCTCTCATTCTCCTTACACATCTGCATTTCCGAGATGTGCTAGTGGATaGTCGAGACTCAGGTTTGGA +
Preference number: 4 (lower is better)
Translates to: CITTLTHSSHSPYTSAFPRCASG*SRLRFG
Trigger: TCCAAACCTGAGTCTCGAGCATCCACTAGCACATCT...CGGAAATGCAGATGTGTAAGGAGAATGAGAGGAATGAGTTAAAGTGGTTATGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp TATCTTCAGGAGGTGCTATTTGGGGTTCTTCATGAGAATTGGTTAGACTTTCAGCTGCTCTTTGATGTGTaGCAGAGTTCTCGTCTTTCC +
Preference number: 4 (lower is better)
Translates to: YLQEVLFGVLHENWLDFQLLFDV*QSSRLS
Trigger: GGAAAGACGAGAACTCTGGCACACATCAAAGAGCAG...CTGAAAGTCTAACCAATTCTCATGAAGAACCCCAAATAGCACCTCCTGAAGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp CAGGTATGTTTTCATCAGAACTATGCACAGATAAGTCAGTGGCAGTTTCTGGAACTTGGGTTAAGAGACTaGTGTAGTACAGTGGTGGTC +
Preference number: 4 (lower is better)
Translates to: QVCFHQNYAQISQWQFLELGLRD*CSTVVV
Trigger: GACCACCACTGTACTACAGCAGTCTCTTAACCCAAG...TTCCAGAAACTGCCACTGACTTATCTGTGCATAGTTCTGATGAAAACATACCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp TGCATAACCACTTTAACTCATTCCTCTCATTCTCCTTACACATCTGCATTTCCGCTTGGGTTAAGAGACTaGTGTAGTACAGTGGTGGTC +
Preference number: 4 (lower is better)
Translates to: CITTLTHSSHSPYTSAFPLGLRD*CSTVVV
Trigger: GACCACCACTGTACTACAGCAGTCTCTTAACCCAAG...CGGAAATGCAGATGTGTAAGGAGAATGAGAGGAATGAGTTAAAGTGGTTATGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp AATATATGGAATGTAGCTCAAATACTCAACACGCAGACTTTACTGGATGCACACGTTTCCAGTAAACATTaGGACGGTCGGGTGTGCAAC +
Preference number: 4 (lower is better)
Translates to: NIWNVAQILNTQTLLDAHVSSKH*DGRVCN
Trigger: GTTGCACACCCGACCGTCGCAATGTTTACTGGAAAC...GTGTGCATCCAGTAAAGTCTGCGTGTTGAGTATTTGAGCTACATTCCATATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTCCAGTTCACAGCTGCTaGTTAAACCTTCCTCAAAAG +
Preference number: 4 (lower is better)
Translates to: FKKIWPTSARSEARMNGCPVHSC*LNLPQK
Trigger: CTTTTGAGGAAGGTTTAAGCAGCAGCTGTGAACTGG...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp ACAATGAAGGAACTGATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCTGCCCAGTTCACAGCTaGTGCTTAAACCTTCCTCAA +
Preference number: 4 (lower is better)
Translates to: TMKELIMSSVSHQPQLYLCPVHS*CLNLPQ
Trigger: TTGAGGAAGGTTTAAGCAGCAGCTGTGAACTGGGCA...GAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTATCAGTTCCTTCATTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp TGCATAACCACTTTAACTCATTCCTCTCATTCTCCTTACACATCTGCATTTCCGAGGAAACTTGTTTCATaGCCAGTTCACAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: CITTLTHSSHSPYTSAFPRKLVS*PVHSCC
Trigger: GCAGCAGCTGTGAACTGGGCATGAAACAAGTTTCCT...CGGAAATGCAGATGTGTAAGGAGAATGAGAGGAATGAGTTAAAGTGGTTATGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp TGCATAACCACTTTAACTCATTCCTCTCATTCTCCTTACACATCTGCATTTCCGATCCACTGGAACTTATaGTGCTTTCCTCGGGTAAGG +
Preference number: 4 (lower is better)
Translates to: CITTLTHSSHSPYTSAFPIHWNL*CFPRVR
Trigger: CCTTACCCGAGGAAAGCAGCATAAGTTCCAGTGGAT...CGGAAATGCAGATGTGTAAGGAGAATGAGAGGAATGAGTTAAAGTGGTTATGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTACCTCACATACTGAGTaGAAAGGTTCTGTAGACTGG +
Preference number: 4 (lower is better)
Translates to: FKKIWPTSARSEARMNGCTSHTE*KGSVDW
Trigger: CCAGTCTACAGAACCTTTGCACTCAGTATGTGAGGT...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp ACAATGAAGGAACTGATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCCCATTTTCTTCTCCATaGGCATTTGCCTCGGCCATA +
Preference number: 4 (lower is better)
Translates to: TMKELIMSSVSHQPQLYLPFSSP*AFASAI
Trigger: TATGGCCGAGGCAAATGCCCATGGAGAAGAAAATGG...GAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTATCAGTTCCTTCATTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTCAATGTCCTCAGCTTTaGTCCATTTCAAGTGCCCTA +
Preference number: 4 (lower is better)
Translates to: FKKIWPTSARSEARMNGCQCPQL*SISSAL
Trigger: TAGGGCACTTGAAATGGACCAAAGCTGAGGACATTG...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000269197.12
CDS-3UTR CCA 90 bp TGTCTTTATACACCTCAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATCTGCCTATCCACTTCTaGGAGCAAAAGCAGGAGGTA +
Preference number: 4 (lower is better)
Translates to: CLYTPQAYAYLIGGGLGNLPIHF*EQKQEV
Trigger: TACCTCCTGCTTTTGCTCCCAGAAGTGGATAGGCAG...ATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTGAGGTGTATAAAGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp TGTCTTTATACACCTCAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATCCGCAACTGCATTTCTaGGGTAAACTCTCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: CLYTPQAYAYLIGGGLGNPQLHF*GKLSFC
Trigger: GCAGAAGGAGAGTTTACCCCAGAAATGCAGTTGCGG...ATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTGAGGTGTATAAAGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp ACAGATACTAGTCTCTACCTCTTCTGCAATTTCCTCCTGAATTACAGATTCTTCAGCTCCAGCGTTGTTTaGTCCAGTAGTGAGCTTCAC +
Preference number: 4 (lower is better)
Translates to: TDTSLYLFCNFLLNYRFFSSSVV*SSSELH
Trigger: GTGAAGCTCACTACTGGACCAAACAACGCTGGAGCT...GAAGAATCTGTAATTCAGGAGGAAATTGCAGAAGAGGTAGAGACTAGTATCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp AATATATGGAATGTAGCTCAAATACTCAACACGCAGACTTTACTGGATGCACACTGTCTGTGCAGAAACTaGAAGGCCAGAAGTCCCACA +
Preference number: 4 (lower is better)
Translates to: NIWNVAQILNTQTLLDAHCLCRN*KARSPT
Trigger: TGTGGGACTTCTGGCCTTCCAGTTTCTGCACAGACA...GTGTGCATCCAGTAAAGTCTGCGTGTTGAGTATTTGAGCTACATTCCATATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp TGCATAACCACTTTAACTCATTCCTCTCATTCTCCTTACACATCTGCATTTCCGAGGCTCTGGAGAAGCTaGGCTTTTCATGCTTTTTGG +
Preference number: 4 (lower is better)
Translates to: CITTLTHSSHSPYTSAFPRLWRS*AFHAFW
Trigger: CCAAAAAGCATGAAAAGCCCAGCTTCTCCAGAGCCT...CGGAAATGCAGATGTGTAAGGAGAATGAGAGGAATGAGTTAAAGTGGTTATGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp TCTCTGAATCTCTACTTTCATTTCTTATCCCATCAGGTGACTTGGAGGGCTCTGTTATTTTGGGGGTACTaGTCTCTACTGCAGTTTCTG +
Preference number: 4 (lower is better)
Translates to: SLNLYFHFLSHQVTWRALLFWGY*SLLQFL
Trigger: CAGAAACTGCAGTAGAGACCAGTACCCCCAAAATAA...CAGAGCCCTCCAAGTCACCTGATGGGATAAGAAATGAAAGTAGAGATTCAGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp CTATTTGGGGTTCTTCATGAGAATTGGTTAGACTTTCAGCCTCCTCAGAAAATTTTTCTGCGGGGAGAGTaGCTCTTCAGATACAGAAGG +
Preference number: 4 (lower is better)
Translates to: LFGVLHENWLDFQPPQKIFLRGE*LFRYRR
Trigger: CCTTCTGTATCTGAAGAGCCACTCTCCCCGCAGAAA...AATTTTCTGAGGAGGCTGAAAGTCTAACCAATTCTCATGAAGAACCCCAAATAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp AATATATGGAATGTAGCTCAAATACTCAACACGCAGACTTTACTGGATGCACACTTTCTGCGGGGAGAGTaGCTCTTCAGATACAGAAGG +
Preference number: 4 (lower is better)
Translates to: NIWNVAQILNTQTLLDAHFLRGE*LFRYRR
Trigger: CCTTCTGTATCTGAAGAGCCACTCTCCCCGCAGAAA...GTGTGCATCCAGTAAAGTCTGCGTGTTGAGTATTTGAGCTACATTCCATATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp AATATATGGAATGTAGCTCAAATACTCAACACGCAGACTTTACTGGATGCACACCCAGAGGTTTGGCAGTaGCGGAAGACTCATCTTTCT +
Preference number: 4 (lower is better)
Translates to: NIWNVAQILNTQTLLDAHPEVWQ*RKTHLS
Trigger: AGAAAGATGAGTCTTCCGCCACTGCCAAACCTCTGG...GTGTGCATCCAGTAAAGTCTGCGTGTTGAGTATTTGAGCTACATTCCATATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp TCTTTAGGTGGAATTTCTACCATAGGGCAAAGAGTAGCACAGAAACCAGGCTCTAGGGCTCTGATGACTTaGAAGTATGTGAGGTTTCTA +
Preference number: 4 (lower is better)
Translates to: SLGGISTIGQRVAQKPGSRALMT*KYVRFL
Trigger: TAGAAACCTCACATACTTCCAAGTCATCAGAGCCCT...AGAGCCTGGTTTCTGTGCTACTCTTTGCCCTATGGTAGAAATTCCACCTAAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp CGGAGGTGGGCAGACTTGTTGCTAGGAGATCTACAGTTTGGATTGACAATAATGCTCAGGTTTGGAGACTaGTTGGCTCTTGATTATAAA +
Preference number: 4 (lower is better)
Translates to: RRWADLLLGDLQFGLTIMLRFGD*LALDYK
Trigger: TTTATAATCAAGAGCCAACCAGTCTCCAAACCTGAG...CATTATTGTCAATCCAAACTGTAGATCTCCTAGCAACAAGTCTGCCCACCTCCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp TGTCTTTATACACCTCAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATGTCTCTTTAGAGGTCTaGAAGAGATGGGCTCGAGCT +
Preference number: 4 (lower is better)
Translates to: CLYTPQAYAYLIGGGLGNVSLEV*KRWARA
Trigger: AGCTCGAGCCCATCTCTTCCAGACCTCTAAAGAGAC...ATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTGAGGTGTATAAAGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACAGCTAGTGGAGAGGTTTaGCAAATTGTTTCCGATGGA +
Preference number: 4 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTASGEV*QIVSDG
Trigger: TCCATCGGAAACAATTTGCCAAACCTCTCCACTAGC...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTCTTCACTCCCAGGTATaGCTATCTTCTCAGAAGGAA +
Preference number: 4 (lower is better)
Translates to: FKKIWPTSARSEARMNGCLHSQV*LSSQKE
Trigger: TTCCTTCTGAGAAGATAGCCATACCTGGGAGTGAAG...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp TGCATAACCACTTTAACTCATTCCTCTCATTCTCCTTACACATCTGCATTTCCGTCACAGTGGTACCCATaGATACAGTGGCCTGTTCTT +
Preference number: 4 (lower is better)
Translates to: CITTLTHSSHSPYTSAFPSQWYP*IQWPVL
Trigger: AAGAACAGGCCACTGTATCCATGGGTACCACTGTGA...CGGAAATGCAGATGTGTAAGGAGAATGAGAGGAATGAGTTAAAGTGGTTATGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp TGTCTTTATACACCTCAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATGGAGACTTGTGCAGGTaGCCGGCAATGTTTTACTGT +
Preference number: 4 (lower is better)
Translates to: CLYTPQAYAYLIGGGLGNGDLCR*PAMFYC
Trigger: ACAGTAAAACATTGCCGGCCACCTGCACAAGTCTCC...ATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTGAGGTGTATAAAGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTCTGGATTTGGAGAGCTaGGCGGAATTTCAACGTTTC +
Preference number: 4 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPLDLES*AEFQRF
Trigger: GAAACGTTGAAATTCCGCCCAGCTCTCCAAATCCAG...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp TGCATAACCACTTTAACTCATTCCTCTCATTCTCCTTACACATCTGCATTTCCGCTTACCATCTGGATTTaGAGAGCTGGGCGGAATTTC +
Preference number: 4 (lower is better)
Translates to: CITTLTHSSHSPYTSAFPLTIWI*RAGRNF
Trigger: GAAATTCCGCCCAGCTCTCCAAATCCAGATGGTAAG...CGGAAATGCAGATGTGTAAGGAGAATGAGAGGAATGAGTTAAAGTGGTTATGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTCACCCCTTTAACATCTaGCTCCACCAACAATTTTCC +
Preference number: 4 (lower is better)
Translates to: FKKIWPTSARSEARMNGCHPFNI*LHQQFS
Trigger: GGAAAATTGTTGGTGGAGCCAGATGTTAAAGGGGTG...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp ACAATGAAGGAACTGATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCTGGGGGATAACATGTTaGCTAACCTTAGCTGGTGAG +
Preference number: 4 (lower is better)
Translates to: TMKELIMSSVSHQPQLYLWGITC*LTLAGE
Trigger: CTCACCAGCTAAGGTTAGCCAACATGTTATCCCCCA...GAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTATCAGTTCCTTCATTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp TGTCTTTATACACCTCAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATCTTTGCACACAATCATaGCTTTCAGCCGGCAAGAGC +
Preference number: 4 (lower is better)
Translates to: CLYTPQAYAYLIGGGLGNLCTQS*LSAGKS
Trigger: GCTCTTGCCGGCTGAAAGCCATGATTGTGTGCAAAG...ATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTGAGGTGTATAAAGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTACTTATGGCTATTGGCTaGCCAATTGCTCTCATATTA +
Preference number: 4 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVLMAIG*PIALIL
Trigger: TAATATGAGAGCAATTGGCCAGCCAATAGCCATAAG...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACATGGTCATTCTTACCCTaGATACAGATGATTCCCCAC +
Preference number: 4 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTWSFLP*IQMIPH
Trigger: GTGGGGAATCATCTGTATCCAGGGTAAGAATGACCA...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTGAAGCACCAAAATCATaGCTACAGCAGCAGGCCTTT +
Preference number: 4 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPEAPKS*LQQQAF
Trigger: AAAGGCCTGCTGCTGTAGCCATGATTTTGGTGCTTC...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp AATATATGGAATGTAGCTCAAATACTCAACACGCAGACTTTACTGGATGCACACCACCCCAACACAACCTaGCAGGCAGTGAAGAGAAAA +
Preference number: 4 (lower is better)
Translates to: NIWNVAQILNTQTLLDAHHPNTT*QAVKRK
Trigger: TTTTCTCTTCACTGCCTGCCAGGTTGTGTTGGGGTG...GTGTGCATCCAGTAAAGTCTGCGTGTTGAGTATTTGAGCTACATTCCATATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR CAA 72 bp GAATCTCTACTTTCATTTCTTATCCCATCAGGTGACTaGGAGGGCTCTGATGACTTGGAAGTATGTGAGGTT +
Preference number: 4 (lower is better)
Translates to: ESLLSFLIPSGD*EGSDDLEVCEV
Trigger: AACCTCACATACTTCCAAGTCATCAGAGCCCTCCAAGTCACCTGATGGGATAAGAAATGAAAGTAGAGATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp CTTGTTGCTAGGAGATCTACAGTTTGGATTGACAATAATGACACCAGTCGAACCACTTTCCAGGGATTTTaGAGAATGTTCCATCCCCTA +
Preference number: 4 (lower is better)
Translates to: LVARRSTVWIDNNDTSRTTFQGF*RMFHPL
Trigger: TAGGGGATGGAACATTCTTCAAAATCCCTGGAAAGT...GGTTCGACTGGTGTCATTATTGTCAATCCAAACTGTAGATCTCCTAGCAACAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTTGTGTTAGTAAGGCTTaGATCTCGAGTGGAAGATGC +
Preference number: 4 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPCVSKA*ISSGRC
Trigger: GCATCTTCCACTCGAGATTCAAGCCTTACTAACACA...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTTTAGAGCTGAAGTACTaGGGCGTAAAATTCCATCAC +
Preference number: 4 (lower is better)
Translates to: FKKIWPTSARSEARMNGCLELKY*GVKFHH
Trigger: GTGATGGAATTTTACGCCTCAGTACTTCAGCTCTAA...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTCATGAAGAACTACTTTaGGCTCCAGCGTTGTTTGGT +
Preference number: 4 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPHEELL*APALFG
Trigger: ACCAAACAACGCTGGAGCTCAAAGTAGTTCTTCATG...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp ACGTTTCAGAGATGCAGGCATTTTCTGAAAGCTGTTCTTCAGGGTCACTCTGTAGATCAAGATATCCTCTaGCTCCAATTCTGCCATTAT +
Preference number: 4 (lower is better)
Translates to: TFQRCRHFLKAVLQGHSVDQDIL*LQFCHY
Trigger: ATAATGGCAGAATTGGAGTCAGAGGATATCTTGATC...TACAGAGTGACCCTGAAGAACAGCTTTCAGAAAATGCCTGCATCTCTGAAACGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp CATTTTCTTCTCCATGGGCATTTGCCTCGGCCATATCTGTACCATCCAATTCAGTCAGGTATTGTCTTATaGTTTTCATCCTGGCATTCA +
Preference number: 4 (lower is better)
Translates to: HFLLHGHLPRPYLYHPIQSGIVL*FSSWHS
Trigger: TGAATGCCAGGATGAAAATCATAAGACAATACCTGA...CTGAATTGGATGGTACAGATATGGCCGAGGCAAATGCCCATGGAGAAGAAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp GATGACTTGGAAGTATGTGAGGTTTCTAACCGACTCTGTGTACTCCCTTGCTTAGACATGAGTCATAGATaGAGTGGAAGGAATAAGAGA +
Preference number: 4 (lower is better)
Translates to: DDLEVCEVSNRLCVLPCLDMSHR*SGRNKR
Trigger: TCTCTTATTCCTTCCACTTCATCTATGACTCATGTC...TAAGCAAGGGAGTACACAGAGTCGGTTAGAAACCTCACATACTTCCAAGTCATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp ACAATGAAGGAACTGATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCCTCTACTGCAGTTTCTaGCTCCTTATGTTCTGTGTC +
Preference number: 4 (lower is better)
Translates to: TMKELIMSSVSHQPQLYLLYCSF*LLMFCV
Trigger: GACACAGAACATAAGGAGTCAGAAACTGCAGTAGAG...GAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTATCAGTTCCTTCATTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp TATCTTCAGGAGGTGCTATTTGGGGTTCTTCATGAGAATTGGTTAGACTTTCAGCTCTACTGCAGTTTCTaGCTCCTTATGTTCTGTGTC +
Preference number: 4 (lower is better)
Translates to: YLQEVLFGVLHENWLDFQLYCSF*LLMFCV
Trigger: GACACAGAACATAAGGAGTCAGAAACTGCAGTAGAG...CTGAAAGTCTAACCAATTCTCATGAAGAACCCCAAATAGCACCTCCTGAAGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp GCTAGTGGATGCTCGAGACTCAGGTTTGGAGACTGGTTGGCTCTTGATTATAAAGACATCAAAGATGCATaGAAGTTTTCATCAGTGGAA +
Preference number: 4 (lower is better)
Translates to: ASGCSRLRFGDWLALDYKDIKDA*KFSSVE
Trigger: TTCCACTGATGAAAACTTTCATGCATCTTTGATGTC...TTTATAATCAAGAGCCAACCAGTCTCCAAACCTGAGTCTCGAGCATCCACTAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACACTCAGTGTCAACATGTaGTTTACAGGTTTGCTGACT +
Preference number: 4 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTLSVNM*FTGLLT
Trigger: AGTCAGCAAACCTGTAAATCACATGTTGACACTGAG...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp AACAAAATGTTGTCTCAAGGGAGGCTGGAGTACATGATTCTTCTGATGTGGACTCTCAGTGTCAACATGTaGTTTACAGGTTTGCTGACT +
Preference number: 4 (lower is better)
Translates to: NKMLSQGRLEYMILLMWTLSVNM*FTGLLT
Trigger: AGTCAGCAAACCTGTAAATCACATGTTGACACTGAG...AGTCCACATCAGAAGAATCATGTACTCCAGCCTCCCTTGAGACAACATTTTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp TGTCTTTATACACCTCAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATCCAATTTTGGAAAGCTaGATCTTGAGAGGGGGAACC +
Preference number: 4 (lower is better)
Translates to: CLYTPQAYAYLIGGGLGNPILES*ILRGGT
Trigger: GGTTCCCCCTCTCAAGATTCAGCTTTCCAAAATTGG...ATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTGAGGTGTATAAAGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp GAATATCCAAGGTCCAGCAGTCAACTAAACTTTCTATATAGCTCATCCCAGAAAAGATGGGCTCGAGCTTaGTGCTTTGCAAAGAGCTTA +
Preference number: 4 (lower is better)
Translates to: EYPRSSSQLNFLYSSSQKRWARA*CFAKSL
Trigger: TAAGCTCTTTGCAAAGCATCAAGCTCGAGCCCATCT...TTTCTGGGATGAGCTATATAGAAAGTTTAGTTGACTGCTGGACCTTGGATATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp ACCTTTAATGGTGTCAAAACAACACGAGGAACAGTCTTGTTTACCATCATTGAGAGATGGGCTCGAGCTTaGTGCTTTGCAAAGAGCTTA +
Preference number: 4 (lower is better)
Translates to: TFNGVKTTRGTVLFTIIERWARA*CFAKSL
Trigger: TAAGCTCTTTGCAAAGCATCAAGCTCGAGCCCATCT...CTCAATGATGGTAAACAAGACTGTTCCTCGTGTTGTTTTGACACCATTAAAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp TGTCTTTATACACCTCAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATGGCACAGAGGTGTACTaGGTGGAGACTAAGTTACTA +
Preference number: 4 (lower is better)
Translates to: CLYTPQAYAYLIGGGLGNGTEVY*VETKLL
Trigger: TAGTAACTTAGTCTCCACTCAGTACACCTCTGTGCC...ATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTGAGGTGTATAAAGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp TGTCTTTATACACCTCAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATGACTTTACACGGAATTaGTCGGTTTATGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: CLYTPQAYAYLIGGGLGNDFTRN*SVYGCW
Trigger: CCAGCAGCCATAAACCGATCAATTCCGTGTAAAGTC...ATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTGAGGTGTATAAAGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTACAAGATTCCTGGGATaGAGTTCTGACACGTTCAAG +
Preference number: 4 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPTRFLG*SSDTFK
Trigger: CTTGAACGTGTCAGAACTTCATCCCAGGAATCTTGT...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTGGTTCACATTTAACTTaGGTGTGTTCTCCTACAGTC +
Preference number: 4 (lower is better)
Translates to: FKKIWPTSARSEARMNGCGSHLT*VCSPTV
Trigger: GACTGTAGGAGAACACACTCAAGTTAAATGTGAACC...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACATGCACCTGCATTTTCTaGGCAGCTAATTGGGTAAAA +
Preference number: 4 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTCTCIF*AANWVK
Trigger: TTTTACCCAATTAGCTGCTCAGAAAATGCAGGTGCA...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACATGGTATAGCAGTGAATaGATTTGGAAGGAGTTGGCA +
Preference number: 4 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTWYSSE*IWKELA
Trigger: TGCCAACTCCTTCCAAATTCATTCACTGCTATACCA...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTGGTAACTTCCACTTTTaGAATTGTGCGGGGGTTTGT +
Preference number: 4 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPGNFHF*NCAGVC
Trigger: ACAAACCCCCGCACAATTTCAAAAGTGGAAGTTACC...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTAACTGCTCCCCCTTCTaGGGATTTTACACACCTTTT +
Preference number: 4 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPNCSPF*GFYTPF
Trigger: AAAAGGTGTGTAAAATCCTCAGAAGGGGGAGCAGTT...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp TTTGCTGACTCAGGGTCTTATTGTGCAAATCTTCAGACGGAAATGCTTCAGGAGATGACTTCCAATATCTaGTTTGCTGTCATTGGTGAG +
Preference number: 4 (lower is better)
Translates to: FADSGSYCANLQTEMLQEMTSNI*FAVIGE
Trigger: CTCACCAATGACAGCAAAGCAGATATTGGAAGTCAT...CTCCTGAAGCATTTCCGTCTGAAGATTTGCACAATAAGACCCTGAGTCAGCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp AACATCATTCATCATAACACAGGATTCCAAGTTATCTTCAGGAGGTGCTATTTGTTCTCCATGGGCATTTaGCTCGGCCATATCTGTACC +
Preference number: 4 (lower is better)
Translates to: NIIHHNTGFQVIFRRCYLFSMGI*LGHICT
Trigger: GGTACAGATATGGCCGAGGCAAATGCCCATGGAGAA...CAAATAGCACCTCCTGAAGATAACTTGGAATCCTGTGTTATGATGAATGATGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp GATGACTTGGAAGTATGTGAGGTTTCTAACCGACTCTGTGTACTCCCTTGCTTAGCTTCATCAGTTACCTaGTTCGAACAAACTCCATTT +
Preference number: 4 (lower is better)
Translates to: DDLEVCEVSNRLCVLPCLASSVT*FEQTPF
Trigger: AAATGGAGTTTGTTCGAAGCAGGTAACTGATGAAGC...TAAGCAAGGGAGTACACAGAGTCGGTTAGAAACCTCACATACTTCCAAGTCATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTATCTCGAGTGGAAGATaGTTCATCAGTTACCTGCTT +
Preference number: 4 (lower is better)
Translates to: FKKIWPTSARSEARMNGCISSGR*FISYLL
Trigger: AAGCAGGTAACTGATGAAGCATCTTCCACTCGAGAT...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTGACACTAACTTGCTTTaGACTGCTGTGTTAGTAAGG +
Preference number: 4 (lower is better)
Translates to: FKKIWPTSARSEARMNGCDTNLL*TAVLVR
Trigger: CCTTACTAACACAGCAGTGCAAAGCAAGTTAGTGTC...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp ATTGACAATAATGACACCAGTCGAACCTTCCATTTTTGTTTCAGGGGTAGAAGAGCCTTTTTGGTGTGCTaGTGGAAGGAAGACACTAAC +
Preference number: 4 (lower is better)
Translates to: IDNNDTSRTFHFCFRGRRAFLVC*WKEDTN
Trigger: GTTAGTGTCTTCCTTCCAGCAGCACACCAAAAAGGC...TCTTCTACCCCTGAAACAAAAATGGAAGGTTCGACTGGTGTCATTATTGTCAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp GAATATCCAAGGTCCAGCAGTCAACTAAACTTTCTATATAGCTCATCCCAGAAAGCCTTTTTGGTGTGCTaGTGGAAGGAAGACACTAAC +
Preference number: 4 (lower is better)
Translates to: EYPRSSSQLNFLYSSSQKAFLVC*WKEDTN
Trigger: GTTAGTGTCTTCCTTCCAGCAGCACACCAAAAAGGC...TTTCTGGGATGAGCTATATAGAAAGTTTAGTTGACTGCTGGACCTTGGATATTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTCTTCTTTTCTGCTGCTaGCTCAAAGCCTGTTTAAGA +
Preference number: 4 (lower is better)
Translates to: FKKIWPTSARSEARMNGCLLFCC*LKACLR
Trigger: TCTTAAACAGGCTTTGAGGCAGCAGCAGAAAAGAAG...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp AACAAAATGTTGTCTCAAGGGAGGCTGGAGTACATGATTCTTCTGATGTGGACTCTTCTTTTCTGCTGCTaGCTCAAAGCCTGTTTAAGA +
Preference number: 4 (lower is better)
Translates to: NKMLSQGRLEYMILLMWTLLFCC*LKACLR
Trigger: TCTTAAACAGGCTTTGAGGCAGCAGCAGAAAAGAAG...AGTCCACATCAGAAGAATCATGTACTCCAGCCTCCCTTGAGACAACATTTTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp ACAATGAAGGAACTGATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCGAAGGCGAATCCGACTaGTCATCAGACACCTTTAAT +
Preference number: 4 (lower is better)
Translates to: TMKELIMSSVSHQPQLYLEGESD*SSDTFN
Trigger: ATTAAAGGTGTCTGATGAGCAGTCGGATTCGCCTTC...GAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTATCAGTTCCTTCATTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACACTGTTTCCACCCTTGTaGTGCATATGCAAAGAATTC +
Preference number: 4 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTLFPPL*CICKEF
Trigger: GAATTCTTTGCATATGCAGCACAAGGGTGGAAACAG...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp TGCATAACCACTTTAACTCATTCCTCTCATTCTCCTTACACATCTGCATTTCCGTGCCTTATCCGCAACTaGATTTCTGGGGTAAACTCT +
Preference number: 4 (lower is better)
Translates to: CITTLTHSSHSPYTSAFPCLIRN*ISGVNS
Trigger: AGAGTTTACCCCAGAAATGCAGTTGCGGATAAGGCA...CGGAAATGCAGATGTGTAAGGAGAATGAGAGGAATGAGTTAAAGTGGTTATGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp TCTTTAGGTGGAATTTCTACCATAGGGCAAAGAGTAGCACAGAAACCAGGCTCTTCCTTCTCAATTTCTTaGCTTATCCGCAACTGCATT +
Preference number: 4 (lower is better)
Translates to: SLGGISTIGQRVAQKPGSSFSIS*LIRNCI
Trigger: AATGCAGTTGCGGATAAGGCAAGAAATTGAGAAGGA...AGAGCCTGGTTTCTGTGCTACTCTTTGCCCTATGGTAGAAATTCCACCTAAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp GATGACTTGGAAGTATGTGAGGTTTCTAACCGACTCTGTGTACTCCCTTGCTTAATTCCTCTCTTGACATaGCCAGCTTTTCTCCATAAA +
Preference number: 4 (lower is better)
Translates to: DDLEVCEVSNRLCVLPCLIPLLT*PAFLHK
Trigger: TTTATGGAGAAAAGCTGGGCATGTCAAGAGAGGAAT...TAAGCAAGGGAGTACACAGAGTCGGTTAGAAACCTCACATACTTCCAAGTCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp TCTTTAGGTGGAATTTCTACCATAGGGCAAAGAGTAGCACAGAAACCAGGCTCTATTCCTCTCTTGACATaGCCAGCTTTTCTCCATAAA +
Preference number: 4 (lower is better)
Translates to: SLGGISTIGQRVAQKPGSIPLLT*PAFLHK
Trigger: TTTATGGAGAAAAGCTGGGCATGTCAAGAGAGGAAT...AGAGCCTGGTTTCTGTGCTACTCTTTGCCCTATGGTAGAAATTCCACCTAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp AATATATGGAATGTAGCTCAAATACTCAACACGCAGACTTTACTGGATGCACACTTTTGGCTGTTGTTCTaGCAAGGCTGTCTGTGCAGA +
Preference number: 4 (lower is better)
Translates to: NIWNVAQILNTQTLLDAHFWLLF*QGCLCR
Trigger: TCTGCACAGACAGCCTTGGCAGAACAACAGCCAAAA...GTGTGCATCCAGTAAAGTCTGCGTGTTGAGTATTTGAGCTACATTCCATATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTTTAGACAGATTCTTCTaGTGGGAGGTAAGGTTCTCT +
Preference number: 4 (lower is better)
Translates to: FKKIWPTSARSEARMNGCLDRFF*WEVRFS
Trigger: AGAGAACCTTACCTCCCAGCAGAAGAATCTGTCTAA...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp CCATCAGGTGACTTGGAGGGCTCTGATGACTTGGAAGTATGTGAGGTTTCTAACCTCTGTGTACTCCCTTaGTTATGTGTTTTATTTCTA +
Preference number: 4 (lower is better)
Translates to: PSGDLEGSDDLEVCEVSNLCVLP*LCVLFL
Trigger: TAGAAATAAAACACATAAGCAAGGGAGTACACAGAG...GTTAGAAACCTCACATACTTCCAAGTCATCAGAGCCCTCCAAGTCACCTGATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp TGTCTTTATACACCTCAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATCTGCTCTTTGATGTGTaGCAGAGTTCTCGTCTTTCC +
Preference number: 4 (lower is better)
Translates to: CLYTPQAYAYLIGGGLGNLLFDV*QSSRLS
Trigger: GGAAAGACGAGAACTCTGGCACACATCAAAGAGCAG...ATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTGAGGTGTATAAAGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp ACAATGAAGGAACTGATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCAGCTTAGCCTTTGTCTaGTCTTTGATGTGTGCCAGA +
Preference number: 4 (lower is better)
Translates to: TMKELIMSSVSHQPQLYLSLAFV*SLMCAR
Trigger: TCTGGCACACATCAAAGAGCAGACAAAGGCTAAGCT...GAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTATCAGTTCCTTCATTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTATTTTCATCAGAACTATaGACAGATAAGTCAGTGGCA +
Preference number: 4 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVFSSEL*TDKSVA
Trigger: TGCCACTGACTTATCTGTGCATAGTTCTGATGAAAA...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp TGTCTTTATACACCTCAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATTTGCCCTGTAGTAACTaGGTCACCAGCGGATTGTTA +
Preference number: 4 (lower is better)
Translates to: CLYTPQAYAYLIGGGLGNLPCSN*VTSGLL
Trigger: TAACAATCCGCTGGTGACGCAGTTACTACAGGGCAA...ATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTGAGGTGTATAAAGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp TGCATAACCACTTTAACTCATTCCTCTCATTCTCCTTACACATCTGCATTTCCGCCCTTCTGTTCAAGATaGCTGTTGAAGGCAAATGCA +
Preference number: 4 (lower is better)
Translates to: CITTLTHSSHSPYTSAFPPFCSR*LLKANA
Trigger: TGCATTTGCCTTCAACAGGCATCTTGAACAGAAGGG...CGGAAATGCAGATGTGTAAGGAGAATGAGAGGAATGAGTTAAAGTGGTTATGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTTTATATTGCTACATATaGCCGTGGACTGTGGCCAAC +
Preference number: 4 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPLYCYI*PWTVAN
Trigger: GTTGGCCACAGTCCACGGGCATATGTAGCAATATAA...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTATTCATCTGCATTGCTaGTGTCGGCAAAGTTCTGAA +
Preference number: 4 (lower is better)
Translates to: FKKIWPTSARSEARMNGCIHLHC*CRQSSE
Trigger: TTCAGAACTTTGCCGACAGCAGCAATGCAGATGAAT...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp ACAATGAAGGAACTGATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCCCAATTCATCTGCATTaGTGCTGTCGGCAAAGTTCT +
Preference number: 4 (lower is better)
Translates to: TMKELIMSSVSHQPQLYLPIHLH*CCRQSS
Trigger: AGAACTTTGCCGACAGCAGCAATGCAGATGAATTGG...GAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTATCAGTTCCTTCATTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp ACAATGAAGGAACTGATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCCAGTTCCAATTCATCTaGATTGCTGCTGTCGGCAAA +
Preference number: 4 (lower is better)
Translates to: TMKELIMSSVSHQPQLYLQFQFI*IAAVGK
Trigger: TTTGCCGACAGCAGCAATGCAGATGAATTGGAACTG...GAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTATCAGTTCCTTCATTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp TGTCTTTATACACCTCAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATGTTTTGAAGGACCTATaGAGTCGTCATGGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: CLYTPQAYAYLIGGGLGNVLKDL*SRHGRR
Trigger: CCTTCTGCCATGACGACTGCATAGGTCCTTCAAAAC...ATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTGAGGTGTATAAAGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp AATATATGGAATGTAGCTCAAATACTCAACACGCAGACTTTACTGGATGCACACGCCATTCAGTTGGGATaGATCCTCCCCTTTATGAGA +
Preference number: 4 (lower is better)
Translates to: NIWNVAQILNTQTLLDAHAIQLG*ILPFMR
Trigger: TCTCATAAAGGGGAGGATGCATCCCAACTGAATGGC...GTGTGCATCCAGTAAAGTCTGCGTGTTGAGTATTTGAGCTACATTCCATATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp TGTCTTTATACACCTCAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATATCCACTGGAACTTATaGTGCTTTCCTCGGGTAAGG +
Preference number: 4 (lower is better)
Translates to: CLYTPQAYAYLIGGGLGNIHWNL*CFPRVR
Trigger: CCTTACCCGAGGAAAGCAGCATAAGTTCCAGTGGAT...ATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTGAGGTGTATAAAGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTATTGTTTGTTTTCCAGTaGGAGATTTTTGCCCATGTT +
Preference number: 4 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVLFVFQ*EIFAHV
Trigger: AACATGGGCAAAAATCTCCCACTGGAAAACAAACAA...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000269197.12
CDS-3UTR CCA 90 bp TGGATTGACAATAATGACACCAGTCGAACCTTCCATTTTTGTTTCAGGGGTAGACAATGTCCTCAGCTTTaGTCCATTTCAAGTGCCCTA +
Preference number: 4 (lower is better)
Translates to: WIDNNDTSRTFHFCFRGRQCPQL*SISSAL
Trigger: TAGGGCACTTGAAATGGACCAAAGCTGAGGACATTG...TCTACCCCTGAAACAAAAATGGAAGGTTCGACTGGTGTCATTATTGTCAATCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000592288.6
ENST00000593195.6
CDS-3UTR CCA 90 bp TATCTTCAGGAGGTGCTATTTGGGGTTCTTCATGAGAATTGGTTAGACTTTCAGCAATGTCCTCAGCTTTaGTCCATTTCAAGTGCCCTA +
Preference number: 4 (lower is better)
Translates to: YLQEVLFGVLHENWLDFQQCPQL*SISSAL
Trigger: TAGGGCACTTGAAATGGACCAAAGCTGAGGACATTG...CTGAAAGTCTAACCAATTCTCATGAAGAACCCCAAATAGCACCTCCTGAAGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592288.6
ENST00000593195.6
CDS-3UTR CCA 90 bp TTTATTAATGCCCTCAAGTTAGTGTTGACAAGAATAGATCCTGGGGTTTCTATGAGCTCCAGCGTTGTTTaGTCCAGTAGTGAGCTTCAC +
Preference number: 4 (lower is better)
Translates to: FINALKLVLTRIDPGVSMSSSVV*SSSELH
Trigger: GTGAAGCTCACTACTGGACCAAACAACGCTGGAGCT...CATAGAAACCCCAGGATCTATTCTTGTCAACACTAACTTGAGGGCATTAATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593195.6
CDS-3UTR CCA 90 bp AGGTATTGTCTTATGATTTTCATCCTGGCATTCACAGATACTAGTCTCTACCTCACAGAAACCAGGCTCTaGAGAAGCTGGGCTTTTCAT +
Preference number: 4 (lower is better)
Translates to: RYCLMIFILAFTDTSLYLTETRL*RSWAFH
Trigger: ATGAAAAGCCCAGCTTCTCCAGAGCCTGGTTTCTGT...GAGGTAGAGACTAGTATCTGTGAATGCCAGGATGAAAATCATAAGACAATACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACAAAGGAAGTGGCAAACTaGATACAAAAGTGGTCTCAG +
Preference number: 4 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTKEVAN*IQKWSQ
Trigger: CTGAGACCACTTTTGTATCCAGTTTGCCACTTCCTT...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACAGGAGTGTCAGTTCCCTaGATGGTTTTTAACATGCTT +
Preference number: 4 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTGVSVP*MVFNML
Trigger: AAGCATGTTAAAAACCATCCAGGGAACTGACACTCC...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTACTGCTTATCATCCATaGAGCTTGATATGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPTAYHP*SLICWS
Trigger: GCTCCAGCATATCAAGCTCCATGGATGATAAGCAGT...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTCTTCACTCCCAGGTATaGCTATCTTCTCAGAAGGAA +
Preference number: 4 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPLHSQV*LSSQKE
Trigger: TTCCTTCTGAGAAGATAGCCATACCTGGGAGTGAAG...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp ACAATGAAGGAACTGATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCCAGCAAAGTTATGACTaGGAGCAGTCGGCTCATTTA +
Preference number: 4 (lower is better)
Translates to: TMKELIMSSVSHQPQLYLQQSYD*EQSAHL
Trigger: TAAATGAGCCGACTGCTCCCAGTCATAACTTTGCTG...GAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTATCAGTTCCTTCATTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp AATATATGGAATGTAGCTCAAATACTCAACACGCAGACTTTACTGGATGCACACCTGGATTTGGAGAGCTaGGCGGAATTTCAACGTTTC +
Preference number: 4 (lower is better)
Translates to: NIWNVAQILNTQTLLDAHLDLES*AEFQRF
Trigger: GAAACGTTGAAATTCCGCCCAGCTCTCCAAATCCAG...GTGTGCATCCAGTAAAGTCTGCGTGTTGAGTATTTGAGCTACATTCCATATATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp GAATATCCAAGGTCCAGCAGTCAACTAAACTTTCTATATAGCTCATCCCAGAAATGGGGGATAACATGTTaGCTAACCTTAGCTGGTGAG +
Preference number: 4 (lower is better)
Translates to: EYPRSSSQLNFLYSSSQKWGITC*LTLAGE
Trigger: CTCACCAGCTAAGGTTAGCCAACATGTTATCCCCCA...TTTCTGGGATGAGCTATATAGAAAGTTTAGTTGACTGCTGGACCTTGGATATTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTCTTTCATGGGCATATTaGGGGATAACATGTTGGCTA +
Preference number: 4 (lower is better)
Translates to: FKKIWPTSARSEARMNGCLSWAY*GITCWL
Trigger: TAGCCAACATGTTATCCCCCAATATGCCCATGAAAG...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTTTTGGCTTTTCCGTGTaGAAAAGGGATACTGCATCT +
Preference number: 4 (lower is better)
Translates to: FKKIWPTSARSEARMNGCFGFSV*KRDTAS
Trigger: AGATGCAGTATCCCTTTTCCACACGGAAAAGCCAAA...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp AATATATGGAATGTAGCTCAAATACTCAACACGCAGACTTTACTGGATGCACACAGTGAGCCATTCAGTTaGGATGCATCCTCCCCTTTA +
Preference number: 4 (lower is better)
Translates to: NIWNVAQILNTQTLLDAHSEPFS*DASSPL
Trigger: TAAAGGGGAGGATGCATCCCAACTGAATGGCTCACT...GTGTGCATCCAGTAAAGTCTGCGTGTTGAGTATTTGAGCTACATTCCATATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp TGTCTTTATACACCTCAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGTGAGCCATTCAGTTaGGATGCATCCTCCCCTTTA +
Preference number: 4 (lower is better)
Translates to: CLYTPQAYAYLIGGGLGNSEPFS*DASSPL
Trigger: TAAAGGGGAGGATGCATCCCAACTGAATGGCTCACT...ATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTGAGGTGTATAAAGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp TGTCTTTATACACCTCAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATTGGGCTTATGGCTATTaGCTGGCCAATTGCTCTCAT +
Preference number: 4 (lower is better)
Translates to: CLYTPQAYAYLIGGGLGNWAYGY*LANCSH
Trigger: ATGAGAGCAATTGGCCAGCCAATAGCCATAAGCCCA...ATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTGAGGTGTATAAAGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp AATATATGGAATGTAGCTCAAATACTCAACACGCAGACTTTACTGGATGCACACAATCCTCTGGGCTTATaGCTATTGGCTGGCCAATTG +
Preference number: 4 (lower is better)
Translates to: NIWNVAQILNTQTLLDAHNPLGL*LLAGQL
Trigger: CAATTGGCCAGCCAATAGCCATAAGCCCAGAGGATT...GTGTGCATCCAGTAAAGTCTGCGTGTTGAGTATTTGAGCTACATTCCATATATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACAACACGCAGACTTTACTaGATGCACACTGAAGATAAC +
Preference number: 4 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTTRRLY*MHTEDN
Trigger: GTTATCTTCAGTGTGCATCCAGTAAAGTCTGCGTGT...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTGCCACAATCAATCAATaGGTTAATGGCACTCCACAT +
Preference number: 4 (lower is better)
Translates to: FKKIWPTSARSEARMNGCATINQ*VNGTPH
Trigger: ATGTGGAGTGCCATTAACCCATTGATTGATTGTGGC...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp TGCATAACCACTTTAACTCATTCCTCTCATTCTCCTTACACATCTGCATTTCCGTGGTCATTCTTACCCTaGATACAGATGATTCCCCAC +
Preference number: 4 (lower is better)
Translates to: CITTLTHSSHSPYTSAFPWSFLP*IQMIPH
Trigger: GTGGGGAATCATCTGTATCCAGGGTAAGAATGACCA...CGGAAATGCAGATGTGTAAGGAGAATGAGAGGAATGAGTTAAAGTGGTTATGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTAGAATTTGGAAGGAGTTaGCATGCAAGTGTCTATATT +
Preference number: 4 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVEFGRS*HASVYI
Trigger: AATATAGACACTTGCATGCCAACTCCTTCCAAATTC...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp TGCATAACCACTTTAACTCATTCCTCTCATTCTCCTTACACATCTGCATTTCCGTTCACAATTGTTCTCTaGGAACGCAGATGGACAGTG +
Preference number: 4 (lower is better)
Translates to: CITTLTHSSHSPYTSAFPFTIVL*ERRWTV
Trigger: CACTGTCCATCTGCGTTCCCAGAGAACAATTGTGAA...CGGAAATGCAGATGTGTAAGGAGAATGAGAGGAATGAGTTAAAGTGGTTATGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp ACAATGAAGGAACTGATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCTTCACAATTGTTCTCTaGGAACGCAGATGGACAGTG +
Preference number: 4 (lower is better)
Translates to: TMKELIMSSVSHQPQLYLFTIVL*ERRWTV
Trigger: CACTGTCCATCTGCGTTCCCAGAGAACAATTGTGAA...GAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTATCAGTTCCTTCATTGT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp TTTGCTGACTCAGGGTCTTATTGTGCAAATCTTCAGACGGAAATGCTTCAGGAGTCCCAAATCCTTCATTaGAGGAAGATCCTTCATACA +
Preference number: 4 (lower is better)
Translates to: FADSGSYCANLQTEMLQESQILH*RKILHT
Trigger: TGTATGAAGGATCTTCCTCCAATGAAGGATTTGGGA...CTCCTGAAGCATTTCCGTCTGAAGATTTGCACAATAAGACCCTGAGTCAGCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp AATATATGGAATGTAGCTCAAATACTCAACACGCAGACTTTACTGGATGCACACCAATGTCCTCAGCTTTaGTCCATTTCAAGTGCCCTG +
Preference number: 4 (lower is better)
Translates to: NIWNVAQILNTQTLLDAHQCPQL*SISSAL
Trigger: CAGGGCACTTGAAATGGACCAAAGCTGAGGACATTG...GTGTGCATCCAGTAAAGTCTGCGTGTTGAGTATTTGAGCTACATTCCATATATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681521.1
3UTR CAA 72 bp TGGGCAGACTTGTTGCTAGGAGATCTACAGTTTGGATaGACAATAATGACACCAGTCGAACCTTCCATTTTT +
Preference number: 4 (lower is better)
Translates to: WADLLLGDLQFG*TIMTPVEPSIF
Trigger: AAAAATGGAAGGTTCGACTGGTGTCATTATTGTCAATCCAAACTGTAGATCTCCTAGCAACAAGTCTGCCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp ACAATGAAGGAACTGATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCATTCGAGTGTTAGTGTaGAGCATTGCATTCAGACAG +
Preference number: 4 (lower is better)
Translates to: TMKELIMSSVSHQPQLYLIRVLV*SIAFRQ
Trigger: CTGTCTGAATGCAATGCTTCACACTAACACTCGAAT...GAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTATCAGTTCCTTCATTGT
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp TCACTCTGTAGCTCCATATCTATAGCAATTCCTTCATTTGGAAACTGGCCTTCTATTCGAGTGTTAGTGTaGAGCATTGCATTCAGACAG +
Preference number: 4 (lower is better)
Translates to: SLCSSISIAIPSFGNWPSIRVLV*SIAFRQ
Trigger: CTGTCTGAATGCAATGCTTCACACTAACACTCGAAT...AGAAGGCCAGTTTCCAAATGAAGGAATTGCTATAGATATGGAGCTACAGAGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTACTTTCCAGGGATTTTaGAGAATGTTCCATCCCCTA +
Preference number: 4 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPTFQGF*RMFHPL
Trigger: TAGGGGATGGAACATTCTTCAAAATCCCTGGAAAGT...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp TGTCTTTATACACCTCAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATTGTGTTAGTAAGGCTTaGATCTCGAGTGGAAGATGC +
Preference number: 4 (lower is better)
Translates to: CLYTPQAYAYLIGGGLGNCVSKA*ISSGRC
Trigger: GCATCTTCCACTCGAGATTCAAGCCTTACTAACACA...ATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTGAGGTGTATAAAGACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp TCACTCTGTAGCTCCATATCTATAGCAATTCCTTCATTTGGAAACTGGCCTTCTTTAGAGCTGAAGTACTaGGGCGTAAAATTCCATCAC +
Preference number: 4 (lower is better)
Translates to: SLCSSISIAIPSFGNWPSLELKY*GVKFHH
Trigger: GTGATGGAATTTTACGCCTCAGTACTTCAGCTCTAA...AGAAGGCCAGTTTCCAAATGAAGGAATTGCTATAGATATGGAGCTACAGAGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp GGGGTTCTTCATGAGAATTGGTTAGACTTTCAGCCTCCTCAGAAAATTCAGGTAGATCAAGATATCCTCTaGCTCCAATTCTGCCATTAT +
Preference number: 4 (lower is better)
Translates to: GVLHENWLDFQPPQKIQVDQDIL*LQFCHY
Trigger: ATAATGGCAGAATTGGAGTCAGAGGATATCTTGATC...TACCTGAATTTTCTGAGGAGGCTGAAAGTCTAACCAATTCTCATGAAGAACCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTTCTGCAATTTCCTCCTaGATTACAGATTCTTCAGGG +
Preference number: 4 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPSAISS*ITDSSG
Trigger: CCCTGAAGAATCTGTAATTCAGGAGGAAATTGCAGA...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp GCTCATCAGACACCTTTAATGGTGTCAAAACAACACGAGGAACAGTCTTGTTTATCTGCAATTTCCTCCTaGATTACAGATTCTTCAGGG +
Preference number: 4 (lower is better)
Translates to: AHQTPLMVSKQHEEQSCLSAISS*ITDSSG
Trigger: CCCTGAAGAATCTGTAATTCAGGAGGAAATTGCAGA...TAAACAAGACTGTTCCTCGTGTTGTTTTGACACCATTAAAGGTGTCTGATGAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp ACAATGAAGGAACTGATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCTCTGTGTCACTGACATaGGTCATAGATGAAGTGGAA +
Preference number: 4 (lower is better)
Translates to: TMKELIMSSVSHQPQLYLSVSLT*VIDEVE
Trigger: TTCCACTTCATCTATGACTCATGTCAGTGACACAGA...GAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTATCAGTTCCTTCATTGT
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp TGTCTTTATACACCTCAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATCTCTACTGCAGTTTCTaGCTCCTTATGTTCTGTGTC +
Preference number: 4 (lower is better)
Translates to: CLYTPQAYAYLIGGGLGNLYCSF*LLMFCV
Trigger: GACACAGAACATAAGGAGTCAGAAACTGCAGTAGAG...ATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTGAGGTGTATAAAGACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp GAATATCCAAGGTCCAGCAGTCAACTAAACTTTCTATATAGCTCATCCCAGAAAGATTTACAGGTTTGCTaGCTCAGGGTCTTATTGTGC +
Preference number: 4 (lower is better)
Translates to: EYPRSSSQLNFLYSSSQKDLQVC*LRVLLC
Trigger: GCACAATAAGACCCTGAGTCAGCAAACCTGTAAATC...TTTCTGGGATGAGCTATATAGAAAGTTTAGTTGACTGCTGGACCTTGGATATTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp ACAATGAAGGAACTGATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCATTTCTAGAGCCTTCTaGAAATGGAGCCTTATCCAC +
Preference number: 4 (lower is better)
Translates to: TMKELIMSSVSHQPQLYLISRAF*KWSLIH
Trigger: GTGGATAAGGCTCCATTTTCAGAAGGCTCTAGAAAT...GAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTATCAGTTCCTTCATTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp TGGATTGACAATAATGACACCAGTCGAACCTTCCATTTTTGTTTCAGGGGTAGAATTTCTAGAGCCTTCTaGAAATGGAGCCTTATCCAC +
Preference number: 4 (lower is better)
Translates to: WIDNNDTSRTFHFCFRGRISRAF*KWSLIH
Trigger: GTGGATAAGGCTCCATTTTCAGAAGGCTCTAGAAAT...TCTACCCCTGAAACAAAAATGGAAGGTTCGACTGGTGTCATTATTGTCAATCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp GAATATCCAAGGTCCAGCAGTCAACTAAACTTTCTATATAGCTCATCCCAGAAAATGTTCCGGGTTGACTaGTCATCTTCTATCCTAGCT +
Preference number: 4 (lower is better)
Translates to: EYPRSSSQLNFLYSSSQKMFRVD*SSSILA
Trigger: AGCTAGGATAGAAGATGATCAGTCAACCCGGAACAT...TTTCTGGGATGAGCTATATAGAAAGTTTAGTTGACTGCTGGACCTTGGATATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp ATATCCTCTGACTCCAATTCTGCCATTATATCTTTAGGTGGAATTTCTACCATATGGAAAGCTGAATCTTaGGAGGGGGAACCCTTGGTT +
Preference number: 4 (lower is better)
Translates to: ISSDSNSAIISLGGISTIWKAES*EGEPLV
Trigger: AACCAAGGGTTCCCCCTCTCAAGATTCAGCTTTCCA...TATGGTAGAAATTCCACCTAAAGATATAATGGCAGAATTGGAGTCAGAGGATAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp ATATCCTCTGACTCCAATTCTGCCATTATATCTTTAGGTGGAATTTCTACCATACCTTTGTCTGCTCTTTaGTGTGTGCCAGAGTTCTCG +
Preference number: 4 (lower is better)
Translates to: ISSDSNSAIISLGGISTIPLSAL*CVPEFS
Trigger: CGAGAACTCTGGCACACATCAAAGAGCAGACAAAGG...TATGGTAGAAATTCCACCTAAAGATATAATGGCAGAATTGGAGTCAGAGGATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp TGCATAACCACTTTAACTCATTCCTCTCATTCTCCTTACACATCTGCATTTCCGATGAAAGTGGAACTGTaGTCTATACCTTCGTTGGCA +
Preference number: 4 (lower is better)
Translates to: CITTLTHSSHSPYTSAFPMKVEL*SIPSLA
Trigger: TGCCAACGAAGGTATAGATCACAGTTCCACTTTCAT...CGGAAATGCAGATGTGTAAGGAGAATGAGAGGAATGAGTTAAAGTGGTTATGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp TGTCTTTATACACCTCAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATACAAGATTCCTGGGATaGAGTTCTGACACGTTCAAG +
Preference number: 4 (lower is better)
Translates to: CLYTPQAYAYLIGGGLGNTRFLG*SSDTFK
Trigger: CTTGAACGTGTCAGAACTTCATCCCAGGAATCTTGT...ATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTGAGGTGTATAAAGACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp GAATATCCAAGGTCCAGCAGTCAACTAAACTTTCTATATAGCTCATCCCAGAAATGCTGTTTTACCCACTaGGGTAGTTTGAAGAGGCAA +
Preference number: 4 (lower is better)
Translates to: EYPRSSSQLNFLYSSSQKCCFTH*GSLKRQ
Trigger: TTGCCTCTTCAAACTACCTCAGTGGGTAAAACAGCA...TTTCTGGGATGAGCTATATAGAAAGTTTAGTTGACTGCTGGACCTTGGATATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp TGCATAACCACTTTAACTCATTCCTCTCATTCTCCTTACACATCTGCATTTCCGGGTTCACATTTAACTTaGGTGTGTTCTCCTACAGTC +
Preference number: 4 (lower is better)
Translates to: CITTLTHSSHSPYTSAFPGSHLT*VCSPTV
Trigger: GACTGTAGGAGAACACACTCAAGTTAAATGTGAACC...CGGAAATGCAGATGTGTAAGGAGAATGAGAGGAATGAGTTAAAGTGGTTATGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp TGCATAACCACTTTAACTCATTCCTCTCATTCTCCTTACACATCTGCATTTCCGCCATTCTTGTCAACATaGAATAGGTTCTGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: CITTLTHSSHSPYTSAFPPFLST*NRFCWK
Trigger: CTTCCAGCAGAACCTATTTCATGTTGACAAGAATGG...CGGAAATGCAGATGTGTAAGGAGAATGAGAGGAATGAGTTAAAGTGGTTATGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp GAATATCCAAGGTCCAGCAGTCAACTAAACTTTCTATATAGCTCATCCCAGAAAGTTCAAGATGCCTGTTaGAGGCAAATGCATTACACC +
Preference number: 4 (lower is better)
Translates to: EYPRSSSQLNFLYSSSQKVQDAC*RQMHYT
Trigger: GGTGTAATGCATTTGCCTTCAACAGGCATCTTGAAC...TTTCTGGGATGAGCTATATAGAAAGTTTAGTTGACTGCTGGACCTTGGATATTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACATGTCAGTTACTGATGTaGTGGTTTTCAATTTGCTGG +
Preference number: 4 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTCQLLM*WFSICW
Trigger: CCAGCAAATTGAAAACCATCACATCAGTAACTGACA...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTTGCACTATCAACAACTaGTTCTCCAAGCCTGTTATG +
Preference number: 4 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPCTINN*FSKPVM
Trigger: CATAACAGGCTTGGAGAATCAGTTGTTGATAGTGCA...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp GAATATCCAAGGTCCAGCAGTCAACTAAACTTTCTATATAGCTCATCCCAGAAAGGTAACTTCCACTTTTaGAATTGTGCGGGGGTTTGT +
Preference number: 4 (lower is better)
Translates to: EYPRSSSQLNFLYSSSQKGNFHF*NCAGVC
Trigger: ACAAACCCCCGCACAATTTCAAAAGTGGAAGTTACC...TTTCTGGGATGAGCTATATAGAAAGTTTAGTTGACTGCTGGACCTTGGATATTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp TGTCTTTATACACCTCAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATTACAGTGACAAAGCATaGAGACTGAAGACGACAGGA +
Preference number: 4 (lower is better)
Translates to: CLYTPQAYAYLIGGGLGNYSDKA*RLKTTG
Trigger: TCCTGTCGTCTTCAGTCTTCATGCTTTGTCACTGTA...ATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTGAGGTGTATAAAGACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTATGACTTCCAATATCTaGTTTGCTGTCATTGGTGAG +
Preference number: 4 (lower is better)
Translates to: FKKIWPTSARSEARMNGCMTSNI*FAVIGE
Trigger: CTCACCAATGACAGCAAAGCAGATATTGGAAGTCAT...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp TGCATAACCACTTTAACTCATTCCTCTCATTCTCCTTACACATCTGCATTTCCGATCTCGAGTGGAAGATaGTTCATCAGTTACCTGCTT +
Preference number: 4 (lower is better)
Translates to: CITTLTHSSHSPYTSAFPISSGR*FISYLL
Trigger: AAGCAGGTAACTGATGAAGCATCTTCCACTCGAGAT...CGGAAATGCAGATGTGTAAGGAGAATGAGAGGAATGAGTTAAAGTGGTTATGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp ACAGGATTCCAAGTTATCTTCAGGAGGTGCTATTTGGGGTTCTTCATGAGAATTGACACTAACTTGCTTTaGACTGCTGTGTTAGTAAGG +
Preference number: 4 (lower is better)
Translates to: TGFQVIFRRCYLGFFMRIDTNLL*TAVLVR
Trigger: CCTTACTAACACAGCAGTGCAAAGCAAGTTAGTGTC...AATTCTCATGAAGAACCCCAAATAGCACCTCCTGAAGATAACTTGGAATCCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp TGCATAACCACTTTAACTCATTCCTCTCATTCTCCTTACACATCTGCATTTCCGCTTCTTTTCTGCTGCTaGCTCAAAGCCTGTTTAAGA +
Preference number: 4 (lower is better)
Translates to: CITTLTHSSHSPYTSAFPLLFCC*LKACLR
Trigger: TCTTAAACAGGCTTTGAGGCAGCAGCAGAAAAGAAG...CGGAAATGCAGATGTGTAAGGAGAATGAGAGGAATGAGTTAAAGTGGTTATGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACATCCTTCTCAATTTCTTaGCTTATCCGCAACTGCATT +
Preference number: 4 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTSFSIS*LIRNCI
Trigger: AATGCAGTTGCGGATAAGGCAAGAAATTGAGAAGGA...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp ACAATGAAGGAACTGATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCGTTATCTTCAGGAGGTaGTATTTGGGGTTCTTCATG +
Preference number: 4 (lower is better)
Translates to: TMKELIMSSVSHQPQLYLVIFRR*YLGFFM
Trigger: CATGAAGAACCCCAAATAGCACCTCCTGAAGATAAC...GAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTATCAGTTCCTTCATTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTGTTATCTTCAGGAGGTaGTATTTGGGGTTCTTCATG +
Preference number: 4 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPVIFRR*YLGFFM
Trigger: CATGAAGAACCCCAAATAGCACCTCCTGAAGATAAC...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp ACAATGAAGGAACTGATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCATCTTCAGACGGAAATaGTTCAGGAGCAATGGAAGA +
Preference number: 4 (lower is better)
Translates to: TMKELIMSSVSHQPQLYLIFRRK*FRSNGR
Trigger: TCTTCCATTGCTCCTGAAGCATTTCCGTCTGAAGAT...GAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTATCAGTTCCTTCATTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp TGGATTGACAATAATGACACCAGTCGAACCTTCCATTTTTGTTTCAGGGGTAGAATCTTCAGACGGAAATaGTTCAGGAGCAATGGAAGA +
Preference number: 4 (lower is better)
Translates to: WIDNNDTSRTFHFCFRGRIFRRK*FRSNGR
Trigger: TCTTCCATTGCTCCTGAAGCATTTCCGTCTGAAGAT...TCTACCCCTGAAACAAAAATGGAAGGTTCGACTGGTGTCATTATTGTCAATCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACACTCAGGGTCTTATTGTaGAAATCTTCAGACGGAAAT +
Preference number: 4 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTLRVLL*KSSDGN
Trigger: ATTTCCGTCTGAAGATTTGCACAATAAGACCCTGAG...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTACTCTGTGTACTCCCTTaGTTATGTGTTTTATTTCTA +
Preference number: 4 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVLCVLP*LCVLFL
Trigger: TAGAAATAAAACACATAAGCAAGGGAGTACACAGAG...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp TTCATCCTGGCATTCACAGATACTAGTCTCTACCTCTTCTGCAATTTCCTCCTGATTCCAAAGCTGTGTTaGTCTGCAGTTTTTCTCTTT +
Preference number: 4 (lower is better)
Translates to: FILAFTDTSLYLFCNFLLIPKLC*SAVFLF
Trigger: AAAGAGAAAAACTGCAGAGCAACACAGCTTTGGAAT...CAGGAGGAAATTGCAGAAGAGGTAGAGACTAGTATCTGTGAATGCCAGGATGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp TCTCTGAATCTCTACTTTCATTTCTTATCCCATCAGGTGACTTGGAGGGCTCTGATTCCAAAGCTGTGTTaGTCTGCAGTTTTTCTCTTT +
Preference number: 4 (lower is better)
Translates to: SLNLYFHFLSHQVTWRALIPKLC*SAVFLF
Trigger: AAAGAGAAAAACTGCAGAGCAACACAGCTTTGGAAT...CAGAGCCCTCCAAGTCACCTGATGGGATAAGAAATGAAAGTAGAGATTCAGAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp ACAGATACTAGTCTCTACCTCTTCTGCAATTTCCTCCTGAATTACAGATTCTTCAGCTTAGCCTTTGTCTaGTCTTTGATGTGTGCCAGA +
Preference number: 4 (lower is better)
Translates to: TDTSLYLFCNFLLNYRFFSLAFV*SLMCAR
Trigger: TCTGGCACACATCAAAGAGCAGACAAAGGCTAAGCT...GAAGAATCTGTAATTCAGGAGGAAATTGCAGAAGAGGTAGAGACTAGTATCTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp ACCTTTAATGGTGTCAAAACAACACGAGGAACAGTCTTGTTTACCATCATTGAGAGCTTAGCCTTTGTCTaGTCTTTGATGTGTGCCAGA +
Preference number: 4 (lower is better)
Translates to: TFNGVKTTRGTVLFTIIESLAFV*SLMCAR
Trigger: TCTGGCACACATCAAAGAGCAGACAAAGGCTAAGCT...CTCAATGATGGTAAACAAGACTGTTCCTCGTGTTGTTTTGACACCATTAAAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp AATATATGGAATGTAGCTCAAATACTCAACACGCAGACTTTACTGGATGCACACAGCTTAGCCTTTGTCTaGTCTTTGATGTGTGCCAGA +
Preference number: 4 (lower is better)
Translates to: NIWNVAQILNTQTLLDAHSLAFV*SLMCAR
Trigger: TCTGGCACACATCAAAGAGCAGACAAAGGCTAAGCT...GTGTGCATCCAGTAAAGTCTGCGTGTTGAGTATTTGAGCTACATTCCATATATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp ACAATGAAGGAACTGATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCGGGATGTTCTTTAATTaGTCCCGATATAGCAGTGCT +
Preference number: 4 (lower is better)
Translates to: TMKELIMSSVSHQPQLYLGMFFN*SRYSSA
Trigger: AGCACTGCTATATCGGGAGCAATTAAAGAACATCCC...GAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTATCAGTTCCTTCATTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp GAATATCCAAGGTCCAGCAGTCAACTAAACTTTCTATATAGCTCATCCCAGAAATTATATTGCTACATATaGCCGTGGACTGTGGCCAAC +
Preference number: 4 (lower is better)
Translates to: EYPRSSSQLNFLYSSSQKLYCYI*PWTVAN
Trigger: GTTGGCCACAGTCCACGGGCATATGTAGCAATATAA...TTTCTGGGATGAGCTATATAGAAAGTTTAGTTGACTGCTGGACCTTGGATATTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp TGTCTTTATACACCTCAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATCCAATTCATCTGCATTaGTGCTGTCGGCAAAGTTCT +
Preference number: 4 (lower is better)
Translates to: CLYTPQAYAYLIGGGLGNPIHLH*CCRQSS
Trigger: AGAACTTTGCCGACAGCAGCAATGCAGATGAATTGG...ATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTGAGGTGTATAAAGACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp AATATATGGAATGTAGCTCAAATACTCAACACGCAGACTTTACTGGATGCACACCAGTTCCAATTCATCTaGATTGCTGCTGTCGGCAAA +
Preference number: 4 (lower is better)
Translates to: NIWNVAQILNTQTLLDAHQFQFI*IAAVGK
Trigger: TTTGCCGACAGCAGCAATGCAGATGAATTGGAACTG...GTGTGCATCCAGTAAAGTCTGCGTGTTGAGTATTTGAGCTACATTCCATATATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp ACAATGAAGGAACTGATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCGTGGAAAAGGGATACTaGATCTTTCACTCAGCTCTT +
Preference number: 4 (lower is better)
Translates to: TMKELIMSSVSHQPQLYLVEKGY*IFHSAL
Trigger: AAGAGCTGAGTGAAAGATGCAGTATCCCTTTTCCAC...GAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTATCAGTTCCTTCATTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp TGCATAACCACTTTAACTCATTCCTCTCATTCTCCTTACACATCTGCATTTCCGGTGGAAAAGGGATACTaGATCTTTCACTCAGCTCTT +
Preference number: 4 (lower is better)
Translates to: CITTLTHSSHSPYTSAFPVEKGY*IFHSAL
Trigger: AAGAGCTGAGTGAAAGATGCAGTATCCCTTTTCCAC...CGGAAATGCAGATGTGTAAGGAGAATGAGAGGAATGAGTTAAAGTGGTTATGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp TGTCTTTATACACCTCAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATACCTCACATACTGAGTaGAAAGGTTCTGTAGACTGG +
Preference number: 4 (lower is better)
Translates to: CLYTPQAYAYLIGGGLGNTSHTE*KGSVDW
Trigger: CCAGTCTACAGAACCTTTGCACTCAGTATGTGAGGT...ATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTGAGGTGTATAAAGACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTGCACATGCTAACATTTaGACACTACACCACAATAAC +
Preference number: 4 (lower is better)
Translates to: FKKIWPTSARSEARMNGCAHANI*TLHHNN
Trigger: GTTATTGTGGTGTAGTGTGCAAATGTTAGCATGTGC...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp TGCATAACCACTTTAACTCATTCCTCTCATTCTCCTTACACATCTGCATTTCCGTACACCTCAGGCATATaGATATCTTATAGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: CITTLTHSSHSPYTSAFPYTSGI*ISYRRR
Trigger: CCTCCTCCTATAAGATATGCATATGCCTGAGGTGTA...CGGAAATGCAGATGTGTAAGGAGAATGAGAGGAATGAGTTAAAGTGGTTATGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp TCCTCTGACTCCAATTCTGCCATTATATCTTTAGGTGGAATTTCTACCATAGGGGGCTTGAATCTCGAGTaGAAGATGCTTCATCAGTTA +
Preference number: 4 (lower is better)
Translates to: SSDSNSAIISLGGISTIGGLNLE*KMLHQL
Trigger: TAACTGATGAAGCATCTTCCACTCGAGATTCAAGCC...CCCTATGGTAGAAATTCCACCTAAAGATATAATGGCAGAATTGGAGTCAGAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp ACAGGATTCCAAGTTATCTTCAGGAGGTGCTATTTGGGGTTCTTCATGAGAATTGGCTTGAATCTCGAGTaGAAGATGCTTCATCAGTTA +
Preference number: 4 (lower is better)
Translates to: TGFQVIFRRCYLGFFMRIGLNLE*KMLHQL
Trigger: TAACTGATGAAGCATCTTCCACTCGAGATTCAAGCC...AATTCTCATGAAGAACCCCAAATAGCACCTCCTGAAGATAACTTGGAATCCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp ACAATGAAGGAACTGATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCGGCTTGAATCTCGAGTaGAAGATGCTTCATCAGTTA +
Preference number: 4 (lower is better)
Translates to: TMKELIMSSVSHQPQLYLGLNLE*KMLHQL
Trigger: TAACTGATGAAGCATCTTCCACTCGAGATTCAAGCC...GAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTATCAGTTCCTTCATTGT
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp TCTCTGAATCTCTACTTTCATTTCTTATCCCATCAGGTGACTTGGAGGGCTCTGTTGTTTGTTTTCCAGTaGGAGATTTTTGCCCATGTT +
Preference number: 4 (lower is better)
Translates to: SLNLYFHFLSHQVTWRALLFVFQ*EIFAHV
Trigger: AACATGGGCAAAAATCTCCCACTGGAAAACAAACAA...CAGAGCCCTCCAAGTCACCTGATGGGATAAGAAATGAAAGTAGAGATTCAGAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000592288.6
ENST00000593195.6
CDS-3UTR CCA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACAGACAAGAATAGATCCTaGGGTTTCTATGTCAATGTC +
Preference number: 4 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTDKNRS*GFYVNV
Trigger: GACATTGACATAGAAACCCCAGGATCTATTCTTGTC...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTACATTATATCTTTAGGTaGAATTTCTACCATAGGGCA +
Preference number: 4 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVHYIFR*NFYHRA
Trigger: TGCCCTATGGTAGAAATTCCACCTAAAGATATAATG...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp CGGAGGTGGGCAGACTTGTTGCTAGGAGATCTACAGTTTGGATTGACAATAATGCATTATATCTTTAGGTaGAATTTCTACCATAGGGCA +
Preference number: 4 (lower is better)
Translates to: RRWADLLLGDLQFGLTIMHYIFR*NFYHRA
Trigger: TGCCCTATGGTAGAAATTCCACCTAAAGATATAATG...CATTATTGTCAATCCAAACTGTAGATCTCCTAGCAACAAGTCTGCCCACCTCCG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTTTATTTTGGGGGTACTaGTCTCTACTGCAGTTTCTG +
Preference number: 4 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPLFWGY*SLLQFL
Trigger: CAGAAACTGCAGTAGAGACCAGTACCCCCAAAATAA...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp TCACTCTGTAGCTCCATATCTATAGCAATTCCTTCATTTGGAAACTGGCCTTCTAAGGAAGTGGCAAACTaGATACAAAAGTGGTCTCAG +
Preference number: 4 (lower is better)
Translates to: SLCSSISIAIPSFGNWPSKEVAN*IQKWSQ
Trigger: CTGAGACCACTTTTGTATCCAGTTTGCCACTTCCTT...AGAAGGCCAGTTTCCAAATGAAGGAATTGCTATAGATATGGAGCTACAGAGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTACATTTATGGAAGAGTTaGAAATTGGAGATGTTTCTG +
Preference number: 4 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVHLWKS*KLEMFL
Trigger: CAGAAACATCTCCAATTTCCAACTCTTCCATAAATG...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp ACTTCCCATCTGCCTATCCACTTCTGGGAGCAAAAGCAGGAGGTATTGTTGAAACATTTATGGAAGAGTTaGAAATTGGAGATGTTTCTG +
Preference number: 4 (lower is better)
Translates to: TSHLPIHFWEQKQEVLLKHLWKS*KLEMFL
Trigger: CAGAAACATCTCCAATTTCCAACTCTTCCATAAATG...TTTCAACAATACCTCCTGCTTTTGCTCCCAGAAGTGGATAGGCAGATGGGAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593195.6
CDS-3UTR CCA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTGTCAGTGGCAGTTTCTaGAAGTTTACTTGGGTTAAG +
Preference number: 4 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPVSGSF*KFTWVK
Trigger: CTTAACCCAAGTAAACTTCCAGAAACTGCCACTGAC...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp ACAATGAAGGAACTGATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCTATAATGGCTATGCATaGAGTGTCAGTTCCCTGGAT +
Preference number: 4 (lower is better)
Translates to: TMKELIMSSVSHQPQLYLYNGYA*SVSSLD
Trigger: ATCCAGGGAACTGACACTCCATGCATAGCCATTATA...GAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTATCAGTTCCTTCATTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACAGCAAATCCGGTTACTTaGGTTATACTGATTGCTACA +
Preference number: 4 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTANPVT*VILIAT
Trigger: TGTAGCAATCAGTATAACCCAAGTAACCGGATTTGC...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTTTGTTACAAGATTCCTaGGATGAAGTTCTGACACGT +
Preference number: 4 (lower is better)
Translates to: FKKIWPTSARSEARMNGCLLQDS*DEVLTR
Trigger: ACGTGTCAGAACTTCATCCCAGGAATCTTGTAACAA...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp GAATATCCAAGGTCCAGCAGTCAACTAAACTTTCTATATAGCTCATCCCAGAAACACCCCTTTAACATCTaGCTCCACCAACAATTTTCC +
Preference number: 4 (lower is better)
Translates to: EYPRSSSQLNFLYSSSQKHPFNI*LHQQFS
Trigger: GGAAAATTGTTGGTGGAGCCAGATGTTAAAGGGGTG...TTTCTGGGATGAGCTATATAGAAAGTTTAGTTGACTGCTGGACCTTGGATATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTCAATTCTGTTCTGCATaGAGTGCTTGTTTAGCCATT +
Preference number: 4 (lower is better)
Translates to: FKKIWPTSARSEARMNGCQFCSA*SACLAI
Trigger: AATGGCTAAACAAGCACTCCATGCAGAACAGAATTG...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTCATCACCTTCTTTCATaGGCATATTGGGGGATAACA +
Preference number: 4 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPHHLLS*AYWGIT
Trigger: TGTTATCCCCCAATATGCCCATGAAAGAAGGTGATG...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp TGCATAACCACTTTAACTCATTCCTCTCATTCTCCTTACACATCTGCATTTCCGGTTGCTGATGCTATTTaGCTTTTCCGTGTGGAAAAG +
Preference number: 4 (lower is better)
Translates to: CITTLTHSSHSPYTSAFPVADAI*LFRVEK
Trigger: CTTTTCCACACGGAAAAGCCAAATAGCATCAGCAAC...CGGAAATGCAGATGTGTAAGGAGAATGAGAGGAATGAGTTAAAGTGGTTATGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp GAATATCCAAGGTCCAGCAGTCAACTAAACTTTCTATATAGCTCATCCCAGAAAAGCTCTAAAATCCTCTaGGCTTATGGCTATTGGCTG +
Preference number: 4 (lower is better)
Translates to: EYPRSSSQLNFLYSSSQKSSKIL*AYGYWL
Trigger: CAGCCAATAGCCATAAGCCCAGAGGATTTTAGAGCT...TTTCTGGGATGAGCTATATAGAAAGTTTAGTTGACTGCTGGACCTTGGATATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp TGCATAACCACTTTAACTCATTCCTCTCATTCTCCTTACACATCTGCATTTCCGACACGCAGACTTTACTaGATGCACACTGAAGATAAC +
Preference number: 4 (lower is better)
Translates to: CITTLTHSSHSPYTSAFPTRRLY*MHTEDN
Trigger: GTTATCTTCAGTGTGCATCCAGTAAAGTCTGCGTGT...CGGAAATGCAGATGTGTAAGGAGAATGAGAGGAATGAGTTAAAGTGGTTATGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp ACAATGAAGGAACTGATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCGCCACAATCAATCAATaGGTTAATGGCACTCCACAT +
Preference number: 4 (lower is better)
Translates to: TMKELIMSSVSHQPQLYLATINQ*VNGTPH
Trigger: ATGTGGAGTGCCATTAACCCATTGATTGATTGTGGC...GAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTATCAGTTCCTTCATTGT
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTAAACTAAGGATCCACTaGAACTTATGCTGCTTTCCT +
Preference number: 4 (lower is better)
Translates to: FKKIWPTSARSEARMNGCKLRIH*NLCCFP
Trigger: AGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTT...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp ACAATGAAGGAACTGATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCAAAGGTTCTGTAGACTaGAGTTTCTTCCGACACCAT +
Preference number: 4 (lower is better)
Translates to: TMKELIMSSVSHQPQLYLKGSVD*SFFRHH
Trigger: ATGGTGTCGGAAGAAACTCCAGTCTACAGAACCTTT...GAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTATCAGTTCCTTCATTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTTATGCTAATCGGACCTaGATGATAGAATCCATGCAC +
Preference number: 4 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPYANRT*MIESMH
Trigger: GTGCATGGATTCTATCATCCAGGTCCGATTAGCATA...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp ACAGATACTAGTCTCTACCTCTTCTGCAATTTCCTCCTGAATTACAGATTCTTCATTCGAGTGTTAGTGTaGAGCATTGCATTCAGACAG +
Preference number: 4 (lower is better)
Translates to: TDTSLYLFCNFLLNYRFFIRVLV*SIAFRQ
Trigger: CTGTCTGAATGCAATGCTTCACACTAACACTCGAAT...GAAGAATCTGTAATTCAGGAGGAAATTGCAGAAGAGGTAGAGACTAGTATCTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp ACCTTTAATGGTGTCAAAACAACACGAGGAACAGTCTTGTTTACCATCATTGAGATTCGAGTGTTAGTGTaGAGCATTGCATTCAGACAG +
Preference number: 4 (lower is better)
Translates to: TFNGVKTTRGTVLFTIIEIRVLV*SIAFRQ
Trigger: CTGTCTGAATGCAATGCTTCACACTAACACTCGAAT...CTCAATGATGGTAAACAAGACTGTTCCTCGTGTTGTTTTGACACCATTAAAGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp TGTCTTTATACACCTCAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATATTCGAGTGTTAGTGTaGAGCATTGCATTCAGACAG +
Preference number: 4 (lower is better)
Translates to: CLYTPQAYAYLIGGGLGNIRVLV*SIAFRQ
Trigger: CTGTCTGAATGCAATGCTTCACACTAACACTCGAAT...ATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTGAGGTGTATAAAGACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp TGTCTTTATACACCTCAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATACTTTCCAGGGATTTTaGAGAATGTTCCATCCCCTA +
Preference number: 4 (lower is better)
Translates to: CLYTPQAYAYLIGGGLGNTFQGF*RMFHPL
Trigger: TAGGGGATGGAACATTCTTCAAAATCCCTGGAAAGT...ATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTGAGGTGTATAAAGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp GAATATCCAAGGTCCAGCAGTCAACTAAACTTTCTATATAGCTCATCCCAGAAATTAGAGCTGAAGTACTaGGGCGTAAAATTCCATCAC +
Preference number: 4 (lower is better)
Translates to: EYPRSSSQLNFLYSSSQKLELKY*GVKFHH
Trigger: GTGATGGAATTTTACGCCTCAGTACTTCAGCTCTAA...TTTCTGGGATGAGCTATATAGAAAGTTTAGTTGACTGCTGGACCTTGGATATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp TGTCTTATGATTTTCATCCTGGCATTCACAGATACTAGTCTCTACCTCTTCTGCGATCAAGATATCCTCTaGCTCCAATTCTGCCATTAT +
Preference number: 4 (lower is better)
Translates to: CLMIFILAFTDTSLYLFCDQDIL*LQFCHY
Trigger: ATAATGGCAGAATTGGAGTCAGAGGATATCTTGATC...GCAGAAGAGGTAGAGACTAGTATCTGTGAATGCCAGGATGAAAATCATAAGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACATCACAGACTTCTAACTaGTCGATAACAACTGTCATT +
Preference number: 4 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTSQTSN*SITTVI
Trigger: AATGACAGTTGTTATCGATCAGTTAGAAGTCTGTGA...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp ACAATGAAGGAACTGATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCGACATGAGTCATAGATaGAGTGGAAGGAATAAGAGA +
Preference number: 4 (lower is better)
Translates to: TMKELIMSSVSHQPQLYLDMSHR*SGRNKR
Trigger: TCTCTTATTCCTTCCACTTCATCTATGACTCATGTC...GAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTATCAGTTCCTTCATTGT
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp AGGTATTGTCTTATGATTTTCATCCTGGCATTCACAGATACTAGTCTCTACCTCTCTGTGTCACTGACATaGGTCATAGATGAAGTGGAA +
Preference number: 4 (lower is better)
Translates to: RYCLMIFILAFTDTSLYLSVSLT*VIDEVE
Trigger: TTCCACTTCATCTATGACTCATGTCAGTGACACAGA...GAGGTAGAGACTAGTATCTGTGAATGCCAGGATGAAAATCATAAGACAATACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACAGACATCAAAGATGCATaGAAGTTTTCATCAGTGGAA +
Preference number: 4 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTDIKDA*KFSSVE
Trigger: TTCCACTGATGAAAACTTTCATGCATCTTTGATGTC...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp GAATATCCAAGGTCCAGCAGTCAACTAAACTTTCTATATAGCTCATCCCAGAAACTCAGTGTCAACATGTaGTTTACAGGTTTGCTGACT +
Preference number: 4 (lower is better)
Translates to: EYPRSSSQLNFLYSSSQKLSVNM*FTGLLT
Trigger: AGTCAGCAAACCTGTAAATCACATGTTGACACTGAG...TTTCTGGGATGAGCTATATAGAAAGTTTAGTTGACTGCTGGACCTTGGATATTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp TGTCTTTATACACCTCAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATATTTCTAGAGCCTTCTaGAAATGGAGCCTTATCCAC +
Preference number: 4 (lower is better)
Translates to: CLYTPQAYAYLIGGGLGNISRAF*KWSLIH
Trigger: GTGGATAAGGCTCCATTTTCAGAAGGCTCTAGAAAT...ATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTGAGGTGTATAAAGACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp GAATATCCAAGGTCCAGCAGTCAACTAAACTTTCTATATAGCTCATCCCAGAAAATGAAAGTGGAACTGTaGTCTATACCTTCGTTGGCA +
Preference number: 4 (lower is better)
Translates to: EYPRSSSQLNFLYSSSQKMKVEL*SIPSLA
Trigger: TGCCAACGAAGGTATAGATCACAGTTCCACTTTCAT...TTTCTGGGATGAGCTATATAGAAAGTTTAGTTGACTGCTGGACCTTGGATATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp ACAATGAAGGAACTGATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCTTACTTGGGTTATACTaGTTGCTACAGGTTGTGTCT +
Preference number: 4 (lower is better)
Translates to: TMKELIMSSVSHQPQLYLLLGLY*LLQVVS
Trigger: AGACACAACCTGTAGCAATCAGTATAACCCAAGTAA...GAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTATCAGTTCCTTCATTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp AATATATGGAATGTAGCTCAAATACTCAACACGCAGACTTTACTGGATGCACACCCATTCTTGTCAACATaGAATAGGTTCTGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: NIWNVAQILNTQTLLDAHPFLST*NRFCWK
Trigger: CTTCCAGCAGAACCTATTTCATGTTGACAAGAATGG...GTGTGCATCCAGTAAAGTCTGCGTGTTGAGTATTTGAGCTACATTCCATATATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp GAATATCCAAGGTCCAGCAGTCAACTAAACTTTCTATATAGCTCATCCCAGAAAGGTCTGAAGCCAGAATaGATGGGTGTCATCAATAAA +
Preference number: 4 (lower is better)
Translates to: EYPRSSSQLNFLYSSSQKGLKPE*MGVINK
Trigger: TTTATTGATGACACCCATTCATTCTGGCTTCAGACC...TTTCTGGGATGAGCTATATAGAAAGTTTAGTTGACTGCTGGACCTTGGATATTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp AATATATGGAATGTAGCTCAAATACTCAACACGCAGACTTTACTGGATGCACACTGGTATAGCAGTGAATaGATTTGGAAGGAGTTGGCA +
Preference number: 4 (lower is better)
Translates to: NIWNVAQILNTQTLLDAHWYSSE*IWKELA
Trigger: TGCCAACTCCTTCCAAATTCATTCACTGCTATACCA...GTGTGCATCCAGTAAAGTCTGCGTGTTGAGTATTTGAGCTACATTCCATATATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp GAATATCCAAGGTCCAGCAGTCAACTAAACTTTCTATATAGCTCATCCCAGAAATTGTACCTCACATACTaGGTGCAAAGGTTCTGTAGA +
Preference number: 4 (lower is better)
Translates to: EYPRSSSQLNFLYSSSQKLYLTY*VQRFCR
Trigger: TCTACAGAACCTTTGCACTCAGTATGTGAGGTACAA...TTTCTGGGATGAGCTATATAGAAAGTTTAGTTGACTGCTGGACCTTGGATATTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp TGTCTTTATACACCTCAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATTGCACTATCAACAACTaGTTCTCCAAGCCTGTTATG +
Preference number: 4 (lower is better)
Translates to: CLYTPQAYAYLIGGGLGNCTINN*FSKPVM
Trigger: CATAACAGGCTTGGAGAATCAGTTGTTGATAGTGCA...ATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTGAGGTGTATAAAGACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTACAAAGCATGAAGACTaGAGACGACAGGAATTTTAT +
Preference number: 4 (lower is better)
Translates to: FKKIWPTSARSEARMNGCTKHED*RRQEFY
Trigger: ATAAAATTCCTGTCGTCTTCAGTCTTCATGCTTTGT...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACATTTACACACCTTTTCTaGGTTTTTCCTGTGGGAATA +
Preference number: 4 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTFTHLF*VFPVGI
Trigger: TATTCCCACAGGAAAAACTCAGAAAAGGTGTGTAAA...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACAAGAATGCATGATCCCTaGATTCTAAACAAAACACTG +
Preference number: 4 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTRMHDP*ILNKTL
Trigger: CAGTGTTTTGTTTAGAATTCAGGGATCATGCATTCT...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp GGATTGACAATAATGACACCAGTCGAACCTTCCATTTTTGTTTCAGGGGTAGAAGCTTCATCAGTTACCTaGTTCGAACAAACTCCATTT +
Preference number: 4 (lower is better)
Translates to: GLTIMTPVEPSIFVSGVEASSVT*FEQTPF
Trigger: AAATGGAGTTTGTTCGAAGCAGGTAACTGATGAAGC...TTCTACCCCTGAAACAAAAATGGAAGGTTCGACTGGTGTCATTATTGTCAATCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTGCTTCATCAGTTACCTaGTTCGAACAAACTCCATTT +
Preference number: 4 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPASSVT*FEQTPF
Trigger: AAATGGAGTTTGTTCGAAGCAGGTAACTGATGAAGC...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp GAATATCCAAGGTCCAGCAGTCAACTAAACTTTCTATATAGCTCATCCCAGAAAGACACTAACTTGCTTTaGACTGCTGTGTTAGTAAGG +
Preference number: 4 (lower is better)
Translates to: EYPRSSSQLNFLYSSSQKDTNLL*TAVLVR
Trigger: CCTTACTAACACAGCAGTGCAAAGCAAGTTAGTGTC...TTTCTGGGATGAGCTATATAGAAAGTTTAGTTGACTGCTGGACCTTGGATATTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp GGGGTTCTTCATGAGAATTGGTTAGACTTTCAGCCTCCTCAGAAAATTCAGGTATTTCCACCCTTGTGCTaGATATGCAAAGAATTCATT +
Preference number: 4 (lower is better)
Translates to: GVLHENWLDFQPPQKIQVFPPLC*ICKEFI
Trigger: AATGAATTCTTTGCATATGCAGCACAAGGGTGGAAA...TACCTGAATTTTCTGAGGAGGCTGAAAGTCTAACCAATTCTCATGAAGAACCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTTTTCCACCCTTGTGCTaGATATGCAAAGAATTCATT +
Preference number: 4 (lower is better)
Translates to: FKKIWPTSARSEARMNGCFPPLC*ICKEFI
Trigger: AATGAATTCTTTGCATATGCAGCACAAGGGTGGAAA...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp GAATATCCAAGGTCCAGCAGTCAACTAAACTTTCTATATAGCTCATCCCAGAAACTGTTTCCACCCTTGTaGTGCATATGCAAAGAATTC +
Preference number: 4 (lower is better)
Translates to: EYPRSSSQLNFLYSSSQKLFPPL*CICKEF
Trigger: GAATTCTTTGCATATGCAGCACAAGGGTGGAAACAG...TTTCTGGGATGAGCTATATAGAAAGTTTAGTTGACTGCTGGACCTTGGATATTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp TCACTCTGTAGCTCCATATCTATAGCAATTCCTTCATTTGGAAACTGGCCTTCTTCCTTCTCAATTTCTTaGCTTATCCGCAACTGCATT +
Preference number: 4 (lower is better)
Translates to: SLCSSISIAIPSFGNWPSSFSIS*LIRNCI
Trigger: AATGCAGTTGCGGATAAGGCAAGAAATTGAGAAGGA...AGAAGGCCAGTTTCCAAATGAAGGAATTGCTATAGATATGGAGCTACAGAGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp ACAATGAAGGAACTGATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCATTCCTCTCTTGACATaGCCAGCTTTTCTCCATAAA +
Preference number: 4 (lower is better)
Translates to: TMKELIMSSVSHQPQLYLIPLLT*PAFLHK
Trigger: TTTATGGAGAAAAGCTGGGCATGTCAAGAGAGGAAT...GAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTATCAGTTCCTTCATTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp TGTCTTTATACACCTCAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATTTAGACAGATTCTTCTaGTGGGAGGTAAGGTTCTCT +
Preference number: 4 (lower is better)
Translates to: CLYTPQAYAYLIGGGLGNLDRFF*WEVRFS
Trigger: AGAGAACCTTACCTCCCAGCAGAAGAATCTGTCTAA...ATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTGAGGTGTATAAAGACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp CTATTTGGGGTTCTTCATGAGAATTGGTTAGACTTTCAGCCTCCTCAGAAAATTTTAGACAGATTCTTCTaGTGGGAGGTAAGGTTCTCT +
Preference number: 4 (lower is better)
Translates to: LFGVLHENWLDFQPPQKILDRFF*WEVRFS
Trigger: AGAGAACCTTACCTCCCAGCAGAAGAATCTGTCTAA...AATTTTCTGAGGAGGCTGAAAGTCTAACCAATTCTCATGAAGAACCCCAAATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp CTATTTGGGGTTCTTCATGAGAATTGGTTAGACTTTCAGCCTCCTCAGAAAATTATCTTCAGACGGAAATaGTTCAGGAGCAATGGAAGA +
Preference number: 4 (lower is better)
Translates to: LFGVLHENWLDFQPPQKIIFRRK*FRSNGR
Trigger: TCTTCCATTGCTCCTGAAGCATTTCCGTCTGAAGAT...AATTTTCTGAGGAGGCTGAAAGTCTAACCAATTCTCATGAAGAACCCCAAATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTTTTTCATCAGAACTATaGACAGATAAGTCAGTGGCA +
Preference number: 4 (lower is better)
Translates to: FKKIWPTSARSEARMNGCFSSEL*TDKSVA
Trigger: TGCCACTGACTTATCTGTGCATAGTTCTGATGAAAA...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp TGTCTTTATACACCTCAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATGGGATGTTCTTTAATTaGTCCCGATATAGCAGTGCT +
Preference number: 4 (lower is better)
Translates to: CLYTPQAYAYLIGGGLGNGMFFN*SRYSSA
Trigger: AGCACTGCTATATCGGGAGCAATTAAAGAACATCCC...ATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTGAGGTGTATAAAGACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp ACAATGAAGGAACTGATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCTCTAAAGCCCTTGTCTaGTTCGTGAAGTTCAGATTT +
Preference number: 4 (lower is better)
Translates to: TMKELIMSSVSHQPQLYLSKALV*FVKFRF
Trigger: AAATCTGAACTTCACGAAGCAGACAAGGGCTTTAGA...GAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTATCAGTTCCTTCATTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp TGTCTTTATACACCTCAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATATTCATCTGCATTGCTaGTGTCGGCAAAGTTCTGAA +
Preference number: 4 (lower is better)
Translates to: CLYTPQAYAYLIGGGLGNIHLHC*CRQSSE
Trigger: TTCAGAACTTTGCCGACAGCAGCAATGCAGATGAAT...ATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTGAGGTGTATAAAGACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp ACAATGAAGGAACTGATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCTATTGGCTGGCCAATTaGTCTCATATTATCAGGTGT +
Preference number: 4 (lower is better)
Translates to: TMKELIMSSVSHQPQLYLYWLAN*SHIIRC
Trigger: ACACCTGATAATATGAGAGCAATTGGCCAGCCAATA...GAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTATCAGTTCCTTCATTGT
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTTGGAAGGAGTTGGCATaGAAGTGTCTATATTATAGG +
Preference number: 4 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPWKELA*KCLYYR
Trigger: CCTATAATATAGACACTTGCATGCCAACTCCTTCCA...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp AATATATGGAATGTAGCTCAAATACTCAACACGCAGACTTTACTGGATGCACACGGCTTGAATCTCGAGTaGAAGATGCTTCATCAGTTA +
Preference number: 4 (lower is better)
Translates to: NIWNVAQILNTQTLLDAHGLNLE*KMLHQL
Trigger: TAACTGATGAAGCATCTTCCACTCGAGATTCAAGCC...GTGTGCATCCAGTAAAGTCTGCGTGTTGAGTATTTGAGCTACATTCCATATATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp TGTCTTTATACACCTCAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATTTTTTGGTGTGCTGCTaGAAGGAAGACACTAACTTG +
Preference number: 4 (lower is better)
Translates to: CLYTPQAYAYLIGGGLGNFLVCC*KEDTNL
Trigger: CAAGTTAGTGTCTTCCTTCCAGCAGCACACCAAAAA...ATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTGAGGTGTATAAAGACA
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp GGGGTTCTTCATGAGAATTGGTTAGACTTTCAGCCTCCTCAGAAAATTCAGGTATTGTTTGTTTTCCAGTaGGAGATTTTTGCCCATGTT +
Preference number: 4 (lower is better)
Translates to: GVLHENWLDFQPPQKIQVLFVFQ*EIFAHV
Trigger: AACATGGGCAAAAATCTCCCACTGGAAAACAAACAA...TACCTGAATTTTCTGAGGAGGCTGAAAGTCTAACCAATTCTCATGAAGAACCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000592288.6
ENST00000593195.6
CDS-3UTR CCA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTGTTCTTCATGAGAATTaGTTAGACTTTCAGCCTCCT +
Preference number: 4 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPVLHEN*LDFQPP
Trigger: AGGAGGCTGAAAGTCTAACCAATTCTCATGAAGAAC...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp ACAATGAAGGAACTGATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCGTTCTTCATGAGAATTaGTTAGACTTTCAGCCTCCT +
Preference number: 4 (lower is better)
Translates to: TMKELIMSSVSHQPQLYLVLHEN*LDFQPP
Trigger: AGGAGGCTGAAAGTCTAACCAATTCTCATGAAGAAC...GAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTATCAGTTCCTTCATTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp AGGTATTGTCTTATGATTTTCATCCTGGCATTCACAGATACTAGTCTCTACCTCTTATTTTGGGGGTACTaGTCTCTACTGCAGTTTCTG +
Preference number: 4 (lower is better)
Translates to: RYCLMIFILAFTDTSLYLLFWGY*SLLQFL
Trigger: CAGAAACTGCAGTAGAGACCAGTACCCCCAAAATAA...GAGGTAGAGACTAGTATCTGTGAATGCCAGGATGAAAATCATAAGACAATACCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp GAATATCCAAGGTCCAGCAGTCAACTAAACTTTCTATATAGCTCATCCCAGAAAAGGGCTCTGATGACTTaGAAGTATGTGAGGTTTCTA +
Preference number: 4 (lower is better)
Translates to: EYPRSSSQLNFLYSSSQKRALMT*KYVRFL
Trigger: TAGAAACCTCACATACTTCCAAGTCATCAGAGCCCT...TTTCTGGGATGAGCTATATAGAAAGTTTAGTTGACTGCTGGACCTTGGATATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp ACAGATACTAGTCTCTACCTCTTCTGCAATTTCCTCCTGAATTACAGATTCTTCAGGGCTCTGATGACTTaGAAGTATGTGAGGTTTCTA +
Preference number: 4 (lower is better)
Translates to: TDTSLYLFCNFLLNYRFFRALMT*KYVRFL
Trigger: TAGAAACCTCACATACTTCCAAGTCATCAGAGCCCT...GAAGAATCTGTAATTCAGGAGGAAATTGCAGAAGAGGTAGAGACTAGTATCTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp GAATATCCAAGGTCCAGCAGTCAACTAAACTTTCTATATAGCTCATCCCAGAAAGTCAGTGGCAGTTTCTaGAAGTTTACTTGGGTTAAG +
Preference number: 4 (lower is better)
Translates to: EYPRSSSQLNFLYSSSQKVSGSF*KFTWVK
Trigger: CTTAACCCAAGTAAACTTCCAGAAACTGCCACTGAC...TTTCTGGGATGAGCTATATAGAAAGTTTAGTTGACTGCTGGACCTTGGATATTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp TGTCTTTATACACCTCAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATGGAGTGTCAGTTCCCTaGATGGTTTTTAACATGCTT +
Preference number: 4 (lower is better)
Translates to: CLYTPQAYAYLIGGGLGNGVSVP*MVFNML
Trigger: AAGCATGTTAAAAACCATCCAGGGAACTGACACTCC...ATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTGAGGTGTATAAAGACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp GAATATCCAAGGTCCAGCAGTCAACTAAACTTTCTATATAGCTCATCCCAGAAAGTTGTTAATTCCCATTaGGGGAATCAAGACAGAGCT +
Preference number: 4 (lower is better)
Translates to: EYPRSSSQLNFLYSSSQKVVNSH*GNQDRA
Trigger: AGCTCTGTCTTGATTCCCCCAATGGGAATTAACAAC...TTTCTGGGATGAGCTATATAGAAAGTTTAGTTGACTGCTGGACCTTGGATATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTTTTCAGCACTTAACTTaGGAGGACTATCATAAGAGT +
Preference number: 4 (lower is better)
Translates to: FKKIWPTSARSEARMNGCFQHLT*EDYHKS
Trigger: ACTCTTATGATAGTCCTCCCAAGTTAAGTGCTGAAA...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp TGCATAACCACTTTAACTCATTCCTCTCATTCTCCTTACACATCTGCATTTCCGGCAAATCCGGTTACTTaGGTTATACTGATTGCTACA +
Preference number: 4 (lower is better)
Translates to: CITTLTHSSHSPYTSAFPANPVT*VILIAT
Trigger: TGTAGCAATCAGTATAACCCAAGTAACCGGATTTGC...CGGAAATGCAGATGTGTAAGGAGAATGAGAGGAATGAGTTAAAGTGGTTATGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp TGCATAACCACTTTAACTCATTCCTCTCATTCTCCTTACACATCTGCATTTCCGTTGTTACAAGATTCCTaGGATGAAGTTCTGACACGT +
Preference number: 4 (lower is better)
Translates to: CITTLTHSSHSPYTSAFPLLQDS*DEVLTR
Trigger: ACGTGTCAGAACTTCATCCCAGGAATCTTGTAACAA...CGGAAATGCAGATGTGTAAGGAGAATGAGAGGAATGAGTTAAAGTGGTTATGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp TGTCTTTATACACCTCAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATTTTGGCTTTTCCGTGTaGAAAAGGGATACTGCATCT +
Preference number: 4 (lower is better)
Translates to: CLYTPQAYAYLIGGGLGNFGFSV*KRDTAS
Trigger: AGATGCAGTATCCCTTTTCCACACGGAAAAGCCAAA...ATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTGAGGTGTATAAAGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp GAATATCCAAGGTCCAGCAGTCAACTAAACTTTCTATATAGCTCATCCCAGAAAGTTGCTGATGCTATTTaGCTTTTCCGTGTGGAAAAG +
Preference number: 4 (lower is better)
Translates to: EYPRSSSQLNFLYSSSQKVADAI*LFRVEK
Trigger: CTTTTCCACACGGAAAAGCCAAATAGCATCAGCAAC...TTTCTGGGATGAGCTATATAGAAAGTTTAGTTGACTGCTGGACCTTGGATATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp ACAATGAAGGAACTGATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCCTTATGGCTATTGGCTaGCCAATTGCTCTCATATTA +
Preference number: 4 (lower is better)
Translates to: TMKELIMSSVSHQPQLYLLMAIG*PIALIL
Trigger: TAATATGAGAGCAATTGGCCAGCCAATAGCCATAAG...GAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTATCAGTTCCTTCATTGT
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACAGGTGGCCAAAATATATaGAATGTAGCTCAAATACTC +
Preference number: 4 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTGGQNI*NVAQIL
Trigger: GAGTATTTGAGCTACATTCCATATATTTTGGCCACC...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp GAATATCCAAGGTCCAGCAGTCAACTAAACTTTCTATATAGCTCATCCCAGAAAAAAGGTTCTGTAGACTaGAGTTTCTTCCGACACCAT +
Preference number: 4 (lower is better)
Translates to: EYPRSSSQLNFLYSSSQKKGSVD*SFFRHH
Trigger: ATGGTGTCGGAAGAAACTCCAGTCTACAGAACCTTT...TTTCTGGGATGAGCTATATAGAAAGTTTAGTTGACTGCTGGACCTTGGATATTC
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTAATCGTTTTAAGTGCTaGCTTGTTTGTTTTCCAGTG +
Preference number: 4 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPNRFKC*LVCFPV
Trigger: CACTGGAAAACAAACAAGTCAGCACTTAAAACGATT...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000269197.12
CDS-3UTR TCA 90 bp GAATATCCAAGGTCCAGCAGTCAACTAAACTTTCTATATAGCTCATCCCAGAAAGATCAAGATATCCTCTaGCTCCAATTCTGCCATTAT +
Preference number: 4 (lower is better)
Translates to: EYPRSSSQLNFLYSSSQKDQDIL*LQFCHY
Trigger: ATAATGGCAGAATTGGAGTCAGAGGATATCTTGATC...TTTCTGGGATGAGCTATATAGAAAGTTTAGTTGACTGCTGGACCTTGGATATTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp ACAATGAAGGAACTGATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCTCAGGTATTGTCTTATaGTTTTCATCCTGGCATTCA +
Preference number: 4 (lower is better)
Translates to: TMKELIMSSVSHQPQLYLSGIVL*FSSWHS
Trigger: TGAATGCCAGGATGAAAATCATAAGACAATACCTGA...GAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTATCAGTTCCTTCATTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp TGTCTTATGATTTTCATCCTGGCATTCACAGATACTAGTCTCTACCTCTTCTGCTCACAGACTTCTAACTaGTCGATAACAACTGTCATT +
Preference number: 4 (lower is better)
Translates to: CLMIFILAFTDTSLYLFCSQTSN*SITTVI
Trigger: AATGACAGTTGTTATCGATCAGTTAGAAGTCTGTGA...GCAGAAGAGGTAGAGACTAGTATCTGTGAATGCCAGGATGAAAATCATAAGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR TCA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTTCACAGACTTCTAACTaGTCGATAACAACTGTCATT +
Preference number: 4 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPSQTSN*SITTVI
Trigger: AATGACAGTTGTTATCGATCAGTTAGAAGTCTGTGA...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp TGTCTTTATACACCTCAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATGACATGAGTCATAGATaGAGTGGAAGGAATAAGAGA +
Preference number: 4 (lower is better)
Translates to: CLYTPQAYAYLIGGGLGNDMSHR*SGRNKR
Trigger: TCTCTTATTCCTTCCACTTCATCTATGACTCATGTC...ATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTGAGGTGTATAAAGACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp AATATATGGAATGTAGCTCAAATACTCAACACGCAGACTTTACTGGATGCACACTTACTTGGGTTATACTaGTTGCTACAGGTTGTGTCT +
Preference number: 4 (lower is better)
Translates to: NIWNVAQILNTQTLLDAHLLGLY*LLQVVS
Trigger: AGACACAACCTGTAGCAATCAGTATAACCCAAGTAA...GTGTGCATCCAGTAAAGTCTGCGTGTTGAGTATTTGAGCTACATTCCATATATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp AATATATGGAATGTAGCTCAAATACTCAACACGCAGACTTTACTGGATGCACACTTCTTTTTGTTTACTTaGACCCGAGTGAGTAACCAG +
Preference number: 4 (lower is better)
Translates to: NIWNVAQILNTQTLLDAHFFLFT*TRVSNQ
Trigger: CTGGTTACTCACTCGGGTTCAAGTAAACAAAAAGAA...GTGTGCATCCAGTAAAGTCTGCGTGTTGAGTATTTGAGCTACATTCCATATATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp AATATATGGAATGTAGCTCAAATACTCAACACGCAGACTTTACTGGATGCACACTGTCAGTTACTGATGTaGTGGTTTTCAATTTGCTGG +
Preference number: 4 (lower is better)
Translates to: NIWNVAQILNTQTLLDAHCQLLM*WFSICW
Trigger: CCAGCAAATTGAAAACCATCACATCAGTAACTGACA...GTGTGCATCCAGTAAAGTCTGCGTGTTGAGTATTTGAGCTACATTCCATATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp GAATATCCAAGGTCCAGCAGTCAACTAAACTTTCTATATAGCTCATCCCAGAAATCTTTGGTAGAGGACTaGAGGAGGATTTTACTTTTC +
Preference number: 4 (lower is better)
Translates to: EYPRSSSQLNFLYSSSQKSLVED*RRILLF
Trigger: GAAAAGTAAAATCCTCCTTCAGTCCTCTACCAAAGA...TTTCTGGGATGAGCTATATAGAAAGTTTAGTTGACTGCTGGACCTTGGATATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp TGCATAACCACTTTAACTCATTCCTCTCATTCTCCTTACACATCTGCATTTCCGTTTACACACCTTTTCTaGGTTTTTCCTGTGGGAATA +
Preference number: 4 (lower is better)
Translates to: CITTLTHSSHSPYTSAFPFTHLF*VFPVGI
Trigger: TATTCCCACAGGAAAAACTCAGAAAAGGTGTGTAAA...CGGAAATGCAGATGTGTAAGGAGAATGAGAGGAATGAGTTAAAGTGGTTATGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTCTTGTCTTTCATGTTTaGATCTCATTGATGGTTCTG +
Preference number: 4 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPLVFHV*ISLMVL
Trigger: CAGAACCATCAATGAGATGCAAACATGAAAGACAAG...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp ACAATGAAGGAACTGATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCCTTGTCTTTCATGTTTaGATCTCATTGATGGTTCTG +
Preference number: 4 (lower is better)
Translates to: TMKELIMSSVSHQPQLYLLVFHV*ISLMVL
Trigger: CAGAACCATCAATGAGATGCAAACATGAAAGACAAG...GAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTATCAGTTCCTTCATTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp AATATATGGAATGTAGCTCAAATACTCAACACGCAGACTTTACTGGATGCACACATTCCTCTCTTGACATaGCCAGCTTTTCTCCATAAA +
Preference number: 4 (lower is better)
Translates to: NIWNVAQILNTQTLLDAHIPLLT*PAFLHK
Trigger: TTTATGGAGAAAAGCTGGGCATGTCAAGAGAGGAAT...GTGTGCATCCAGTAAAGTCTGCGTGTTGAGTATTTGAGCTACATTCCATATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTATTCCAAAGCTGTGTTaGTCTGCAGTTTTTCTCTTT +
Preference number: 4 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPIPKLC*SAVFLF
Trigger: AAAGAGAAAAACTGCAGAGCAACACAGCTTTGGAAT...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp TGTCTTTATACACCTCAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATTTGGGTTATACTGATTaGTACAGGTTGTGTCTGCTT +
Preference number: 4 (lower is better)
Translates to: CLYTPQAYAYLIGGGLGNLGYTD*YRLCLL
Trigger: AAGCAGACACAACCTGTAGCAATCAGTATAACCCAA...ATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTGAGGTGTATAAAGACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp GAATATCCAAGGTCCAGCAGTCAACTAAACTTTCTATATAGCTCATCCCAGAAATTGGGTTATACTGATTaGTACAGGTTGTGTCTGCTT +
Preference number: 4 (lower is better)
Translates to: EYPRSSSQLNFLYSSSQKLGYTD*YRLCLL
Trigger: AAGCAGACACAACCTGTAGCAATCAGTATAACCCAA...TTTCTGGGATGAGCTATATAGAAAGTTTAGTTGACTGCTGGACCTTGGATATTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp AATATATGGAATGTAGCTCAAATACTCAACACGCAGACTTTACTGGATGCACACTCTAAAGCCCTTGTCTaGTTCGTGAAGTTCAGATTT +
Preference number: 4 (lower is better)
Translates to: NIWNVAQILNTQTLLDAHSKALV*FVKFRF
Trigger: AAATCTGAACTTCACGAAGCAGACAAGGGCTTTAGA...GTGTGCATCCAGTAAAGTCTGCGTGTTGAGTATTTGAGCTACATTCCATATATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp AATATATGGAATGTAGCTCAAATACTCAACACGCAGACTTTACTGGATGCACACTTGTTTAGCCATTCTTaGTTAAATGGCTGGCTGTGT +
Preference number: 4 (lower is better)
Translates to: NIWNVAQILNTQTLLDAHLFSHS*LNGWLC
Trigger: ACACAGCCAGCCATTTAAGCAAGAATGGCTAAACAA...GTGTGCATCCAGTAAAGTCTGCGTGTTGAGTATTTGAGCTACATTCCATATATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp ACAATGAAGGAACTGATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCAATGGACTTTTCAATTaGAGATGCTGCCCTTTTGAA +
Preference number: 4 (lower is better)
Translates to: TMKELIMSSVSHQPQLYLNGLFN*RCCPFE
Trigger: TTCAAAAGGGCAGCATCTGCAATTGAAAAGTCCATT...GAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTATCAGTTCCTTCATTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp TGTCTTTATACACCTCAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATTGGAAGGAGTTGGCATaGAAGTGTCTATATTATAGG +
Preference number: 4 (lower is better)
Translates to: CLYTPQAYAYLIGGGLGNWKELA*KCLYYR
Trigger: CCTATAATATAGACACTTGCATGCCAACTCCTTCCA...ATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTGAGGTGTATAAAGACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTATTCTTACTCTCGACTaGATTATAAAGCACCATATG +
Preference number: 4 (lower is better)
Translates to: FKKIWPTSARSEARMNGCILTLD*IIKHHM
Trigger: CATATGGTGCTTTATAATGCAGTCGAGAGTAAGAAT...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp AACATCATTCATCATAACACAGGATTCCAAGTTATCTTCAGGAGGTGCTATTTGTTTTTGGTGTGCTGCTaGAAGGAAGACACTAACTTG +
Preference number: 4 (lower is better)
Translates to: NIIHHNTGFQVIFRRCYLFLVCC*KEDTNL
Trigger: CAAGTTAGTGTCTTCCTTCCAGCAGCACACCAAAAA...CAAATAGCACCTCCTGAAGATAACTTGGAATCCTGTGTTATGATGAATGATGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp TGTCTTTATACACCTCAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATGACAAGAATAGATCCTaGGGTTTCTATGTCAATGTC +
Preference number: 4 (lower is better)
Translates to: CLYTPQAYAYLIGGGLGNDKNRS*GFYVNV
Trigger: GACATTGACATAGAAACCCCAGGATCTATTCTTGTC...ATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTGAGGTGTATAAAGACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp ACCTTTAATGGTGTCAAAACAACACGAGGAACAGTCTTGTTTACCATCATTGAGGTTCTTCATGAGAATTaGTTAGACTTTCAGCCTCCT +
Preference number: 4 (lower is better)
Translates to: TFNGVKTTRGTVLFTIIEVLHEN*LDFQPP
Trigger: AGGAGGCTGAAAGTCTAACCAATTCTCATGAAGAAC...CTCAATGATGGTAAACAAGACTGTTCCTCGTGTTGTTTTGACACCATTAAAGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp AACATCATTCATCATAACACAGGATTCCAAGTTATCTTCAGGAGGTGCTATTTGTTATTTTGGGGGTACTaGTCTCTACTGCAGTTTCTG +
Preference number: 4 (lower is better)
Translates to: NIIHHNTGFQVIFRRCYLLFWGY*SLLQFL
Trigger: CAGAAACTGCAGTAGAGACCAGTACCCCCAAAATAA...CAAATAGCACCTCCTGAAGATAACTTGGAATCCTGTGTTATGATGAATGATGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp TGTCTTTATACACCTCAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATCTCAGGTTTGGAGACTaGTTGGCTCTTGATTATAAA +
Preference number: 4 (lower is better)
Translates to: CLYTPQAYAYLIGGGLGNLRFGD*LALDYK
Trigger: TTTATAATCAAGAGCCAACCAGTCTCCAAACCTGAG...ATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTGAGGTGTATAAAGACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp GAATATCCAAGGTCCAGCAGTCAACTAAACTTTCTATATAGCTCATCCCAGAAACTCAGGTTTGGAGACTaGTTGGCTCTTGATTATAAA +
Preference number: 4 (lower is better)
Translates to: EYPRSSSQLNFLYSSSQKLRFGD*LALDYK
Trigger: TTTATAATCAAGAGCCAACCAGTCTCCAAACCTGAG...TTTCTGGGATGAGCTATATAGAAAGTTTAGTTGACTGCTGGACCTTGGATATTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp CAGGTATGTTTTCATCAGAACTATGCACAGATAAGTCAGTGGCAGTTTCTGGAAAGGAGATCTACAGTTTaGATTGACAATAATGACACC +
Preference number: 4 (lower is better)
Translates to: QVCFHQNYAQISQWQFLERRSTV*IDNNDT
Trigger: GGTGTCATTATTGTCAATCCAAACTGTAGATCTCCT...TTCCAGAAACTGCCACTGACTTATCTGTGCATAGTTCTGATGAAAACATACCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp ACAATGAAGGAACTGATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCAGGAGATCTACAGTTTaGATTGACAATAATGACACC +
Preference number: 4 (lower is better)
Translates to: TMKELIMSSVSHQPQLYLRRSTV*IDNNDT
Trigger: GGTGTCATTATTGTCAATCCAAACTGTAGATCTCCT...GAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTATCAGTTCCTTCATTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACATGTCAGTTCCCTGGATaGTTTTTAACATGCTTATAT +
Preference number: 4 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTCQFPG*FLTCLY
Trigger: ATATAAGCATGTTAAAAACCATCCAGGGAACTGACA...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTTGTCAGTTCCCTGGATaGTTTTTAACATGCTTATAT +
Preference number: 4 (lower is better)
Translates to: FKKIWPTSARSEARMNGCCQFPG*FLTCLY
Trigger: ATATAAGCATGTTAAAAACCATCCAGGGAACTGACA...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTACTTTTAAAAAGATATaGCCAACCTCTGCAAGGTCT +
Preference number: 4 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPTFKKI*PTSARS
Trigger: AGACCTTGCAGAGGTTGGCCATATCTTTTTAAAAGT...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTGAATTTGGAAGGAGTTaGCATGCAAGTGTCTATATT +
Preference number: 4 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPEFGRS*HASVYI
Trigger: AATATAGACACTTGCATGCCAACTCCTTCCAAATTC...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTTGGTTTTCAATTTGCTaGTGTAGACAGTATCTGACA +
Preference number: 4 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPWFSIC*CRQYLT
Trigger: TGTCAGATACTGTCTACACCAGCAAATTGAAAACCA...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp ACAATGAAGGAACTGATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCTATTTAGTAACATTTTaGCTACATAGGCCCCTGACA +
Preference number: 4 (lower is better)
Translates to: TMKELIMSSVSHQPQLYLYLVTF*LHRPLT
Trigger: TGTCAGGGGCCTATGTAGCCAAAATGTTACTAAATA...GAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTATCAGTTCCTTCATTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR CAA 72 bp AGCATGATAGAAACCACTGCATTATTCTATTTGTTGTaGCTGATGCTATTTGGCTTTTCCGTGTGGAAAAGG +
Preference number: 4 (lower is better)
Translates to: SMIETTALFYLL*LMLFGFSVWKR
Trigger: CCTTTTCCACACGGAAAAGCCAAATAGCATCAGCAACAACAAATAGAATAATGCAGTGGTTTCTATCATGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp GAATATCCAAGGTCCAGCAGTCAACTAAACTTTCTATATAGCTCATCCCAGAAAGACATCAAAGATGCATaGAAGTTTTCATCAGTGGAA +
Preference number: 4 (lower is better)
Translates to: EYPRSSSQLNFLYSSSQKDIKDA*KFSSVE
Trigger: TTCCACTGATGAAAACTTTCATGCATCTTTGATGTC...TTTCTGGGATGAGCTATATAGAAAGTTTAGTTGACTGCTGGACCTTGGATATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp AATATATGGAATGTAGCTCAAATACTCAACACGCAGACTTTACTGGATGCACACACAAAGCATGAAGACTaGAGACGACAGGAATTTTAT +
Preference number: 4 (lower is better)
Translates to: NIWNVAQILNTQTLLDAHTKHED*RRQEFY
Trigger: ATAAAATTCCTGTCGTCTTCAGTCTTCATGCTTTGT...GTGTGCATCCAGTAAAGTCTGCGTGTTGAGTATTTGAGCTACATTCCATATATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR TCA 90 bp GAATATCCAAGGTCCAGCAGTCAACTAAACTTTCTATATAGCTCATCCCAGAAAAGAATGCATGATCCCTaGATTCTAAACAAAACACTG +
Preference number: 4 (lower is better)
Translates to: EYPRSSSQLNFLYSSSQKRMHDP*ILNKTL
Trigger: CAGTGTTTTGTTTAGAATTCAGGGATCATGCATTCT...TTTCTGGGATGAGCTATATAGAAAGTTTAGTTGACTGCTGGACCTTGGATATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp ATATCCTCTGACTCCAATTCTGCCATTATATCTTTAGGTGGAATTTCTACCATAGACACTAACTTGCTTTaGACTGCTGTGTTAGTAAGG +
Preference number: 4 (lower is better)
Translates to: ISSDSNSAIISLGGISTIDTNLL*TAVLVR
Trigger: CCTTACTAACACAGCAGTGCAAAGCAAGTTAGTGTC...TATGGTAGAAATTCCACCTAAAGATATAATGGCAGAATTGGAGTCAGAGGATAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp AATATATGGAATGTAGCTCAAATACTCAACACGCAGACTTTACTGGATGCACACCCAGTGGGAGATTTTTaGCCATGTTTCATTTCTTTA +
Preference number: 4 (lower is better)
Translates to: NIWNVAQILNTQTLLDAHPVGDF*PCFISL
Trigger: TAAAGAAATGAAACATGGGCAAAAATCTCCCACTGG...GTGTGCATCCAGTAAAGTCTGCGTGTTGAGTATTTGAGCTACATTCCATATATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000269197.12
CDS-3UTR GCA 90 bp TGTCTTTATACACCTCAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATTTTCCACCCTTGTGCTaGATATGCAAAGAATTCATT +
Preference number: 4 (lower is better)
Translates to: CLYTPQAYAYLIGGGLGNFPPLC*ICKEFI
Trigger: AATGAATTCTTTGCATATGCAGCACAAGGGTGGAAA...ATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTGAGGTGTATAAAGACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp ACAGATACTAGTCTCTACCTCTTCTGCAATTTCCTCCTGAATTACAGATTCTTCTTTCCACCCTTGTGCTaGATATGCAAAGAATTCATT +
Preference number: 4 (lower is better)
Translates to: TDTSLYLFCNFLLNYRFFFPPLC*ICKEFI
Trigger: AATGAATTCTTTGCATATGCAGCACAAGGGTGGAAA...GAAGAATCTGTAATTCAGGAGGAAATTGCAGAAGAGGTAGAGACTAGTATCTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp GCTCATCAGACACCTTTAATGGTGTCAAAACAACACGAGGAACAGTCTTGTTTACTCTGTGTACTCCCTTaGTTATGTGTTTTATTTCTA +
Preference number: 4 (lower is better)
Translates to: AHQTPLMVSKQHEEQSCLLCVLP*LCVLFL
Trigger: TAGAAATAAAACACATAAGCAAGGGAGTACACAGAG...TAAACAAGACTGTTCCTCGTGTTGTTTTGACACCATTAAAGGTGTCTGATGAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTCTCTGTGTACTCCCTTaGTTATGTGTTTTATTTCTA +
Preference number: 4 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPLCVLP*LCVLFL
Trigger: TAGAAATAAAACACATAAGCAAGGGAGTACACAGAG...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp AATATATGGAATGTAGCTCAAATACTCAACACGCAGACTTTACTGGATGCACACATTCCAAAGCTGTGTTaGTCTGCAGTTTTTCTCTTT +
Preference number: 4 (lower is better)
Translates to: NIWNVAQILNTQTLLDAHIPKLC*SAVFLF
Trigger: AAAGAGAAAAACTGCAGAGCAACACAGCTTTGGAAT...GTGTGCATCCAGTAAAGTCTGCGTGTTGAGTATTTGAGCTACATTCCATATATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp ACAATGAAGGAACTGATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCCTTGATATTAGTAACTaGTTATCATCCATGGAGCTT +
Preference number: 4 (lower is better)
Translates to: TMKELIMSSVSHQPQLYLLDISN*LSSMEL
Trigger: AAGCTCCATGGATGATAAGCAGTTACTAATATCAAG...GAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTATCAGTTCCTTCATTGT
38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp AATATATGGAATGTAGCTCAAATACTCAACACGCAGACTTTACTGGATGCACACAATGGACTTTTCAATTaGAGATGCTGCCCTTTTGAA +
Preference number: 4 (lower is better)
Translates to: NIWNVAQILNTQTLLDAHNGLFN*RCCPFE
Trigger: TTCAAAAGGGCAGCATCTGCAATTGAAAAGTCCATT...GTGTGCATCCAGTAAAGTCTGCGTGTTGAGTATTTGAGCTACATTCCATATATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTTTCTTAAATGCTTGTTaGACTCAGTCACATTTAGTC +
Preference number: 4 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPFLNAC*TQSHLV
Trigger: GACTAAATGTGACTGAGTGCAACAAGCATTTAAGAA...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp ACAATGAAGGAACTGATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCCATTATATCTTTAGGTaGAATTTCTACCATAGGGCA +
Preference number: 4 (lower is better)
Translates to: TMKELIMSSVSHQPQLYLHYIFR*NFYHRA
Trigger: TGCCCTATGGTAGAAATTCCACCTAAAGATATAATG...GAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTATCAGTTCCTTCATTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp GGATTGACAATAATGACACCAGTCGAACCTTCCATTTTTGTTTCAGGGGTAGAACATTTATGGAAGAGTTaGAAATTGGAGATGTTTCTG +
Preference number: 4 (lower is better)
Translates to: GLTIMTPVEPSIFVSGVEHLWKS*KLEMFL
Trigger: CAGAAACATCTCCAATTTCCAACTCTTCCATAAATG...TTCTACCCCTGAAACAAAAATGGAAGGTTCGACTGGTGTCATTATTGTCAATCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp GAATATCCAAGGTCCAGCAGTCAACTAAACTTTCTATATAGCTCATCCCAGAAACTTGATTATAAAAGGTaGCCCAATTTTGGAAAGCTG +
Preference number: 4 (lower is better)
Translates to: EYPRSSSQLNFLYSSSQKLDYKR*PNFGKL
Trigger: CAGCTTTCCAAAATTGGGCCACCTTTTATAATCAAG...TTTCTGGGATGAGCTATATAGAAAGTTTAGTTGACTGCTGGACCTTGGATATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp AATATATGGAATGTAGCTCAAATACTCAACACGCAGACTTTACTGGATGCACACTTTCAGCACTTAACTTaGGAGGACTATCATAAGAGT +
Preference number: 4 (lower is better)
Translates to: NIWNVAQILNTQTLLDAHFQHLT*EDYHKS
Trigger: ACTCTTATGATAGTCCTCCCAAGTTAAGTGCTGAAA...GTGTGCATCCAGTAAAGTCTGCGTGTTGAGTATTTGAGCTACATTCCATATATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR CAA 72 bp TTGGATACTGGTGATGCTTCAGATGTTAATGGTAAGTaGGACATAAGAGATGCTTCTGATATTTCAGGTGAA +
Preference number: 4 (lower is better)
Translates to: LDTGDASDVNGK*DIRDASDISGE
Trigger: TTCACCTGAAATATCAGAAGCATCTCTTATGTCCAACTTACCATTAACATCTGAAGCATCACCAGTATCCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp CTATTTGGGGTTCTTCATGAGAATTGGTTAGACTTTCAGCCTCCTCAGAAAATTCTCTGTGTACTCCCTTaGTTATGTGTTTTATTTCTA +
Preference number: 4 (lower is better)
Translates to: LFGVLHENWLDFQPPQKILCVLP*LCVLFL
Trigger: TAGAAATAAAACACATAAGCAAGGGAGTACACAGAG...AATTTTCTGAGGAGGCTGAAAGTCTAACCAATTCTCATGAAGAACCCCAAATAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR GCA 90 bp GAATATCCAAGGTCCAGCAGTCAACTAAACTTTCTATATAGCTCATCCCAGAAACTTGATATTAGTAACTaGTTATCATCCATGGAGCTT +
Preference number: 4 (lower is better)
Translates to: EYPRSSSQLNFLYSSSQKLDISN*LSSMEL
Trigger: AAGCTCCATGGATGATAAGCAGTTACTAATATCAAG...TTTCTGGGATGAGCTATATAGAAAGTTTAGTTGACTGCTGGACCTTGGATATTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp GAATATCCAAGGTCCAGCAGTCAACTAAACTTTCTATATAGCTCATCCCAGAAAATTCTTACTCTCGACTaGATTATAAAGCACCATATG +
Preference number: 4 (lower is better)
Translates to: EYPRSSSQLNFLYSSSQKILTLD*IIKHHM
Trigger: CATATGGTGCTTTATAATGCAGTCGAGAGTAAGAAT...TTTCTGGGATGAGCTATATAGAAAGTTTAGTTGACTGCTGGACCTTGGATATTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR GCA 90 bp TGTCTTTATACACCTCAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATTTCTTAAATGCTTGTTaGACTCAGTCACATTTAGTC +
Preference number: 4 (lower is better)
Translates to: CLYTPQAYAYLIGGGLGNFLNAC*TQSHLV
Trigger: GACTAAATGTGACTGAGTGCAACAAGCATTTAAGAA...ATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTGAGGTGTATAAAGACA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp ACAGATACTAGTCTCTACCTCTTCTGCAATTTCCTCCTGAATTACAGATTCTTCCATTATATCTTTAGGTaGAATTTCTACCATAGGGCA +
Preference number: 4 (lower is better)
Translates to: TDTSLYLFCNFLLNYRFFHYIFR*NFYHRA
Trigger: TGCCCTATGGTAGAAATTCCACCTAAAGATATAATG...GAAGAATCTGTAATTCAGGAGGAAATTGCAGAAGAGGTAGAGACTAGTATCTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CCA 90 bp GAATATCCAAGGTCCAGCAGTCAACTAAACTTTCTATATAGCTCATCCCAGAAAGCTTTCAATACATTTTaGTATAATGGCTATGCATGG +
Preference number: 4 (lower is better)
Translates to: EYPRSSSQLNFLYSSSQKAFNTF*YNGYAW
Trigger: CCATGCATAGCCATTATACCAAAATGTATTGAAAGC...TTTCTGGGATGAGCTATATAGAAAGTTTAGTTGACTGCTGGACCTTGGATATTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CCA 90 bp TGTCTTTATACACCTCAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATGCTTTCAATACATTTTaGTATAATGGCTATGCATGG +
Preference number: 4 (lower is better)
Translates to: CLYTPQAYAYLIGGGLGNAFNTF*YNGYAW
Trigger: CCATGCATAGCCATTATACCAAAATGTATTGAAAGC...ATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTGAGGTGTATAAAGACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR CAA 72 bp ATTAGCATGATAGAAACCACTGCATTATTCTATTTGTaGTTGCTGATGCTATTTGGCTTTTCCGTGTGGAAA +
Preference number: 4 (lower is better)
Translates to: ISMIETTALFYL*LLMLFGFSVWK
Trigger: TTTCCACACGGAAAAGCCAAATAGCATCAGCAACAACAAATAGAATAATGCAGTGGTTTCTATCATGCTAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
3UTR CAA 72 bp AACGTATGTTTATTTATTAATGCCCTCAAGTTAGTGTaGACAAGAATAGATCCTGGGGTTTCTATGTCAATG +
Preference number: 4 (lower is better)
Translates to: NVCLFINALKLV*TRIDPGVSMSM
Trigger: CATTGACATAGAAACCCCAGGATCTATTCTTGTCAACACTAACTTGAGGGCATTAATAAATAAACATACGTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593195.6
CDS-3UTR CAA 90 bp TCCTGGACTTCCCATGGCTCCAGAGACAATGCTCGCTGCAGCAGCCACAGCAGCTCGCTGGGCCCGAGCTaGTTGGGCCCGGGCCTTGAT +
Preference number: 5 (lower is better)
Translates to: SWTSHGSRDNARCSSHSSSLGPS*LGPGLD
Trigger: ATCAAGGCCCGGGCCCAACAAGCTCGGGCCCAGCGA...GCTGCTGTGGCTGCTGCAGCGAGCATTGTCTCTGGAGCCATGGGAAGTCCAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS CCA 90 bp CAGAGAGGGAAGTCGAGCTGCGCCGAGCGCTCGGAAATTCACCCGTaGAGAAGGCACAGCAGAGCCCCGAGAGCGAAGTACGGGGAGAAG +
Preference number: 5 (lower is better)
Translates to: QRGKSSCAERSEIHP*RRHSRAPRAKYGEK
Trigger: CTTCTCCCCGTACTTCGCTCTCGGGGCTCTGCTGTGCCTTCTCCACGGGTGAATTTCCGAGCGCTCGGCGCAGCTCGACTTCCCTCTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000592349.5
ENST00000642541.1
CDS GCA 90 bp GAGGACACGCCACGGGCTGTACGGATGCCTCTGTCCTCACTGGTCTaGCCTGCAGGTCCAAGCTGGCTTCTGAGCTTTCAACGGAGACAG +
Preference number: 5 (lower is better)
Translates to: EDTPRAVRMPLSSLV*PAGPSWLLSFQRRQ
Trigger: CTGTCTCCGTTGAAAGCTCAGAAGCCAGCTTGGACCTGCAGGGCAGACCAGTGAGGACAGAGGCATCCGTACAGCCCGTGGCGTGTCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS GCA 90 bp CCTGCTAATCACAGACACCTGAGGACACGCCACGGGCTGTACGGATaGCTCTGTCCTCACTGGTCTGCCCTGCAGGTCCAAGCTGGCTTC +
Preference number: 5 (lower is better)
Translates to: PANHRHLRTRHGLYG*LCPHWSALQVQAGF
Trigger: GAAGCCAGCTTGGACCTGCAGGGCAGACCAGTGAGGACAGAGGCATCCGTACAGCCCGTGGCGTGTCCTCAGGTGTCTGTGATTAGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS GCA 90 bp ATTGCCACACAAAGGTCTCCGGAGCGGCAGAGAGGGAAGTCGAGCTaGGCCGAGCGCTCGGAAATTCACCCGTGGAGAAGGCACAGCAGA +
Preference number: 5 (lower is better)
Translates to: IATQRSPERQRGKSS*AERSEIHPWRRHSR
Trigger: TCTGCTGTGCCTTCTCCACGGGTGAATTTCCGAGCGCTCGGCGCAGCTCGACTTCCCTCTCTGCCGCTCCGGAGACCTTTGTGTGGCAAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592349.5
ENST00000642541.1
CDS GCA 90 bp CACGCCACGGGCTGTACGGATGCCTCTGTCCTCACTGGTCTGCCCTaGAGGTCCAAGCTGGCTTCTGAGCTTTCAACGGAGACAGTCAGA +
Preference number: 5 (lower is better)
Translates to: HATGCTDASVLTGLP*RSKLASELSTETVR
Trigger: TCTGACTGTCTCCGTTGAAAGCTCAGAAGCCAGCTTGGACCTGCAGGGCAGACCAGTGAGGACAGAGGCATCCGTACAGCCCGTGGCGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp GTTCTCGTCTTTCCACCCTCTCCTGGACTTCCCATGGCTCCAGAGACAATGCTCCTGGGCCCGAGCTTGTaGGGCCCGGGCCTTGATATC +
Preference number: 5 (lower is better)
Translates to: VLVFPPSPGLPMAPETMLLGPSL*GPGLDI
Trigger: GATATCAAGGCCCGGGCCCAACAAGCTCGGGCCCAG...GAGCATTGTCTCTGGAGCCATGGGAAGTCCAGGAGAGGGTGGAAAGACGAGAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CAA 90 bp TACAGTGGTGGTCTCCCGGAGGTGGGCAGACTTGTTGCTAGGAGATCTACAGTTTCGCTGGGCCCGAGCTaGTTGGGCCCGGGCCTTGAT +
Preference number: 5 (lower is better)
Translates to: YSGGLPEVGRLVARRSTVSLGPS*LGPGLD
Trigger: ATCAAGGCCCGGGCCCAACAAGCTCGGGCCCAGCGA...AACTGTAGATCTCCTAGCAACAAGTCTGCCCACCTCCGGGAGACCACCACTGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CAA 90 bp GTTCTCGTCTTTCCACCCTCTCCTGGACTTCCCATGGCTCCAGAGACAATGCTCTGTTGGGCCCGGGCCTaGATATCTGCGAGGGTCCTG +
Preference number: 5 (lower is better)
Translates to: VLVFPPSPGLPMAPETMLCWARA*ISARVL
Trigger: CAGGACCCTCGCAGATATCAAGGCCCGGGCCCAACA...GAGCATTGTCTCTGGAGCCATGGGAAGTCCAGGAGAGGGTGGAAAGACGAGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CAA 90 bp CTCCTGGACTTCCCATGGCTCCAGAGACAATGCTCGCTGCAGCAGCCACAGCAGCGGAGGTGGGCAGACTaGTTGCTAGGAGATCTACAG +
Preference number: 5 (lower is better)
Translates to: LLDFPWLQRQCSLQQPQQRRWAD*LLGDLQ
Trigger: CTGTAGATCTCCTAGCAACAAGTCTGCCCACCTCCG...CTGCTGTGGCTGCTGCAGCGAGCATTGTCTCTGGAGCCATGGGAAGTCCAGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CAA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTCACCCCACTGGGGTCTaGGAAGAGGCCTGTAACAGA +
Preference number: 5 (lower is better)
Translates to: CAGPHHRTDDATLGLASAHPTGV*EEACNR
Trigger: TCTGTTACAGGCCTCTTCCAAGACCCCAGTGGGGTG...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS TCA 90 bp ATACCTTCGTTGGCAACTGGCTCAGGCCTGCTAATCACAGACACCTaGGGACACGCCACGGGCTGTACGGATGCCTCTGTCCTCACTGGT +
Preference number: 5 (lower is better)
Translates to: IPSLATGSGLLITDT*GHATGCTDASVLTG
Trigger: ACCAGTGAGGACAGAGGCATCCGTACAGCCCGTGGCGTGTCCTCAGGTGTCTGTGATTAGCAGGCCTGAGCCAGTTGCCAACGAAGGTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp ACAATGCTCGCTGCAGCAGCCACAGCAGCAGCTGCAGCAGCCTCTCGCTGGGCCCTTCCAATATCTGCTTaGCTGTCATTGGTGAGTTGG +
Preference number: 5 (lower is better)
Translates to: TMLAAAATAAAAAASRWALPISA*LSLVSW
Trigger: CCAACTCACCAATGACAGCAAAGCAGATATTGGAAG...GGCCCAGCGAGAGGCTGCTGCAGCTGCTGCTGTGGCTGCTGCAGCGAGCATTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CAA 90 bp ACAATGCTCGCTGCAGCAGCCACAGCAGCAGCTGCAGCAGCCTCTCGCTGGGCCGACTTTCCAGGGATTTaGAAGAATGTTCCATCCCCT +
Preference number: 5 (lower is better)
Translates to: TMLAAAATAAAAAASRWADFPGI*KNVPSP
Trigger: AGGGGATGGAACATTCTTCAAAATCCCTGGAAAGTC...GGCCCAGCGAGAGGCTGCTGCAGCTGCTGCTGTGGCTGCTGCAGCGAGCATTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CAA 90 bp TGCTCTTTGATGTGTGCCAGAGTTCTCGTCTTTCCACCCTCTCCTGGACTTCCCTGTTGGGCCCGGGCCTaGATATCTGCGAGGGTCCTG +
Preference number: 5 (lower is better)
Translates to: CSLMCARVLVFPPSPGLPCWARA*ISARVL
Trigger: CAGGACCCTCGCAGATATCAAGGCCCGGGCCCAACA...GGGAAGTCCAGGAGAGGGTGGAAAGACGAGAACTCTGGCACACATCAAAGAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS CCA 90 bp GTACGGATGCCTCTGTCCTCACTGGTCTGCCCTGCAGGTCCAAGCTaGCTTCTGAGCTTTCAACGGAGACAGTCAGAGACAAACTGGAGG +
Preference number: 5 (lower is better)
Translates to: VRMPLSSLVCPAGPS*LLSFQRRQSETNWR
Trigger: CCTCCAGTTTGTCTCTGACTGTCTCCGTTGAAAGCTCAGAAGCCAGCTTGGACCTGCAGGGCAGACCAGTGAGGACAGAGGCATCCGTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp CTTGGGTTAAGAGACTGCTGTAGTACAGTGGTGGTCTCCCGGAGGTGGGCAGACTTCTCTCCCAGAGGTTaGGCAGTGGCGGAAGACTCA +
Preference number: 5 (lower is better)
Translates to: LGLRDCCSTVVVSRRWADFSPRG*AVAEDS
Trigger: TGAGTCTTCCGCCACTGCCAAACCTCTGGGAGAGAA...GTCTGCCCACCTCCGGGAGACCACCACTGTACTACAGCAGTCTCTTAACCCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CAA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTGGCAATGGAAGCCTGTaGATTTCAAGCTTGGCTCCC +
Preference number: 5 (lower is better)
Translates to: CAGPHHRTDDATLGLASAGNGSL*ISSLAP
Trigger: GGGAGCCAAGCTTGAAATCAACAGGCTTCCATTGCC...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTAAGCCTGTGGCAGGATaGGAGCCACTTCCCAAAATC +
Preference number: 5 (lower is better)
Translates to: CAGPHHRTDDATLGLASAKPVAG*EPLPKI
Trigger: GATTTTGGGAAGTGGCTCCAATCCTGCCACAGGCTT...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS TCA 90 bp GGAGGTCAGCGTGGTGCTGTGGTCAACGATGACTTTACACGGAATTaGTCGGTTTATGGCTGCTGGTGCAAAGCCCCCTGGTGGTTGCTG +
Preference number: 5 (lower is better)
Translates to: GGQRGAVVNDDFTRN*SVYGCWCKAPWWLL
Trigger: CAGCAACCACCAGGGGGCTTTGCACCAGCAGCCATAAACCGATCAATTCCGTGTAAAGTCATCGTTGACCACAGCACCACGCTGACCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp GTTCCTCCCGCCACTGACAGATGTGCTAGTGGATGCTCGAGACTCAGGTTTGGATTCTCTCCCAGAGGTTaGGCAGTGGCGGAAGACTCA +
Preference number: 5 (lower is better)
Translates to: VPPATDRCASGCSRLRFGFSPRG*AVAEDS
Trigger: TGAGTCTTCCGCCACTGCCAAACCTCTGGGAGAGAA...TCCAAACCTGAGTCTCGAGCATCCACTAGCACATCTGTCAGTGGCGGGAGGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CAA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTCTGTTGATTTCAAGCTaGGCTCCCAATCTGGGCTGT +
Preference number: 5 (lower is better)
Translates to: CAGPHHRTDDATLGLASALLISS*APNLGC
Trigger: ACAGCCCAGATTGGGAGCCAAGCTTGAAATCAACAG...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTCCTTACCATCTGGATTaGGAGAGCTGGGCGGAATTT +
Preference number: 5 (lower is better)
Translates to: CAGPHHRTDDATLGLASAPYHLD*ESWAEF
Trigger: AAATTCCGCCCAGCTCTCCAAATCCAGATGGTAAGG...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp AGGTTTGGCAGTGGCGGAAGACTCATCTTTCTGCGGGGAGAGTGGCTCTTCAGACTTCTCCATGGGCATTaGCCTCGGCCATATCTGTAC +
Preference number: 5 (lower is better)
Translates to: RFGSGGRLIFLRGEWLFRLLHGH*PRPYLY
Trigger: GTACAGATATGGCCGAGGCAAATGCCCATGGAGAAG...TCTGAAGAGCCACTCTCCCCGCAGAAAGATGAGTCTTCCGCCACTGCCAAACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CAA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTGGCTTTTCATGCTTTTaGGCTGTTGTTCTGCCAAGG +
Preference number: 5 (lower is better)
Translates to: CAGPHHRTDDATLGLASAGFSCF*AVVLPR
Trigger: CCTTGGCAGAACAACAGCCAAAAAGCATGAAAAGCC...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTAAGCAAGTTCTGGAATaGAAGCAGGGTAGGGCTTCT +
Preference number: 5 (lower is better)
Translates to: CAGPHHRTDDATLGLASAKQVLE*KQGRAS
Trigger: AGAAGCCCTACCCTGCTTCAATTCCAGAACTTGCTT...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTACTGGGCCCGAGCTTGTaGGGCCCGGGCCTTGATATC +
Preference number: 5 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVLGPSL*GPGLDI
Trigger: GATATCAAGGCCCGGGCCCAACAAGCTCGGGCCCAG...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp TCCTGGACTTCCCATGGCTCCAGAGACAATGCTCGCTGCAGCAGCCACAGCAGCGTCCCAAATCCTTCATaGGAGGAAGATCCTTCATAC +
Preference number: 5 (lower is better)
Translates to: SWTSHGSRDNARCSSHSSVPNPS*EEDPSY
Trigger: GTATGAAGGATCTTCCTCCAATGAAGGATTTGGGAC...GCTGCTGTGGCTGCTGCAGCGAGCATTGTCTCTGGAGCCATGGGAAGTCCAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
CDS TCA 90 bp GGTTCTGCTGGAAGCTACACGAGGGGAGCAGCCGCTTTTGCTGTTTaGCCTCAGGGCTGTGAACAATTCTGTTCTGCATGGAGTGCTTGT +
Preference number: 5 (lower is better)
Translates to: GSAGSYTRGAAAFAV*PQGCEQFCSAWSAC
Trigger: ACAAGCACTCCATGCAGAACAGAATTGTTCACAGCCCTGAGGTCAAACAGCAAAAGCGGCTGCTCCCCTCGTGTAGCTTCCAGCAGAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS TCA 90 bp TGTGAGGTACCAGCGTCAGTGTGGAAGCCGCCATTCTTGTCAACATaGAATAGGTTCTGCTGGAAGCTACACGAGGGGAGCAGCCGCTTT +
Preference number: 5 (lower is better)
Translates to: CEVPASVWKPPFLST*NRFCWKLHEGSSRF
Trigger: AAAGCGGCTGCTCCCCTCGTGTAGCTTCCAGCAGAACCTATTTCATGTTGACAAGAATGGCGGCTTCCACACTGACGCTGGTACCTCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS GCA 90 bp AGTTGGGGTGTTTTTCTAGTGCCAGGCGGGCAGCCTCGGCCCAGGTaGGGTCCTTCTTCTTCCTCTTGTCTTTCATGTTTGCATCTCATT +
Preference number: 5 (lower is better)
Translates to: SWGVFLVPGGQPRPR*GPSSSSCLSCLHLI
Trigger: AATGAGATGCAAACATGAAAGACAAGAGGAAGAAGAAGGACCGCACCTGGGCCGAGGCTGCCCGCCTGGCACTAGAAAAACACCCCAACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269197.12
ENST00000592288.6
ENST00000681521.1
CDS GCA 90 bp AACCAGAGAGTCTGTGACCGCTACAGAATCACTGCAGCTGAGGGCTaGTCTCACAGTGGTACCCATGGATACAGTGGCCTGTTCTTCACT +
Preference number: 5 (lower is better)
Translates to: NQRVCDRYRITAAEG*SHSGTHGYSGLFFT
Trigger: AGTGAAGAACAGGCCACTGTATCCATGGGTACCACTGTGAGAGCAGCCCTCAGCTGCAGTGATTCTGTAGCGGTCACAGACTCTCTGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS GCA 90 bp GCGGCGGCGGATGTACTAGTGCTTTGTTTGGCATTGTGTGTGCAGTaGCTCCCACCTCATCACCTTCTTTCATGGGCATATTGGGGGATA +
Preference number: 5 (lower is better)
Translates to: AAADVLVLCLALCVQ*LPPHHLLSWAYWGI
Trigger: TATCCCCCAATATGCCCATGAAAGAAGGTGATGAGGTGGGAGGCACTGCACACACAATGCCAAACAAAGCACTAGTACATCCGCCGCCGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS CCA 90 bp AGCAGCAATGAAAGTGGAACTGTGATCTATACCTTCGTTGGCAACTaGCTCAGGCCTGCTAATCACAGACACCTGAGGACACGCCACGGG +
Preference number: 5 (lower is better)
Translates to: SSNESGTVIYTFVGN*LRPANHRHLRTRHG
Trigger: CCCGTGGCGTGTCCTCAGGTGTCTGTGATTAGCAGGCCTGAGCCAGTTGCCAACGAAGGTATAGATCACAGTTCCACTTTCATTGCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS CCA 90 bp CATTTGGAGTGGTGCCAGAGTCCCTGCCAAGTAGCCCTTACCATCTaGATTTGGAGAGCTGGGCGGAATTTCAACGTTTCTCTCTGGTGC +
Preference number: 5 (lower is better)
Translates to: HLEWCQSPCQVALTI*IWRAGRNFNVSLWC
Trigger: GCACCAGAGAGAAACGTTGAAATTCCGCCCAGCTCTCCAAATCCAGATGGTAAGGGCTACTTGGCAGGGACTCTGGCACCACTCCAAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp CTGGAGAAGGCAGGCTGGTACAGGCTCCCTCTGGGCTCTCAGAAGAAAAGGACGCTTCCAATATCTGCTTaGCTGTCATTGGTGAGTTGG +
Preference number: 5 (lower is better)
Translates to: LEKAGWYRLPLGSQKKRTLPISA*LSLVSW
Trigger: CCAACTCACCAATGACAGCAAAGCAGATATTGGAAG...CGTCCTTTTCTTCTGAGAGCCCAGAGGGAGCCTGTACCAGCCTGCCTTCTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CAA 90 bp TGCTCTTTGATGTGTGCCAGAGTTCTCGTCTTTCCACCCTCTCCTGGACTTCCCCTTCTCCATGGGCATTaGCCTCGGCCATATCTGTAC +
Preference number: 5 (lower is better)
Translates to: CSLMCARVLVFPPSPGLPLLHGH*PRPYLY
Trigger: GTACAGATATGGCCGAGGCAAATGCCCATGGAGAAG...GGGAAGTCCAGGAGAGGGTGGAAAGACGAGAACTCTGGCACACATCAAAGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CAA 90 bp GTTCTCGTCTTTCCACCCTCTCCTGGACTTCCCATGGCTCCAGAGACAATGCTCCATGCTTTTTGGCTGTaGTTCTGCCAAGGCTGTCTG +
Preference number: 5 (lower is better)
Translates to: VLVFPPSPGLPMAPETMLHAFWL*FCQGCL
Trigger: CAGACAGCCTTGGCAGAACAACAGCCAAAAAGCATG...GAGCATTGTCTCTGGAGCCATGGGAAGTCCAGGAGAGGGTGGAAAGACGAGAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CAA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTGACCCTGTTTTTATTTaGGGGGTACTGGTCTCTACT +
Preference number: 5 (lower is better)
Translates to: CAGPHHRTDDATLGLASADPVFI*GVLVST
Trigger: AGTAGAGACCAGTACCCCCAAAATAAAAACAGGGTC...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp TTACTTGGGTTAAGAGACTGCTGTAGTACAGTGGTGGTCTCCCGGAGGTGGGCAATCCCATCAGGTGACTaGGAGGGCTCTGATGACTTG +
Preference number: 5 (lower is better)
Translates to: LLGLRDCCSTVVVSRRWAIPSGD*EGSDDL
Trigger: CAAGTCATCAGAGCCCTCCAAGTCACCTGATGGGAT...TGCCCACCTCCGGGAGACCACCACTGTACTACAGCAGTCTCTTAACCCAAGTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CAA 90 bp TATGATGGGTTCGGGAGTATTAGACAGATTCTTCTGCTGGGAGGTAAGGTTCTCTGTTGGGCCCGGGCCTaGATATCTGCGAGGGTCCTG +
Preference number: 5 (lower is better)
Translates to: YDGFGSIRQILLLGGKVLCWARA*ISARVL
Trigger: CAGGACCCTCGCAGATATCAAGGCCCGGGCCCAACA...GAGAACCTTACCTCCCAGCAGAAGAATCTGTCTAATACTCCCGAACCCATCATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CAA 90 bp GGCTGGTACAGGCTCCCTCTGGGCTCTCAGAAGAAAAGGACGTTTCAGAGATGCGAGATGGGCTCGAGCTaGATGCTTTGCAAAGAGCTT +
Preference number: 5 (lower is better)
Translates to: GWYRLPLGSQKKRTFQRCEMGSS*MLCKEL
Trigger: AAGCTCTTTGCAAAGCATCAAGCTCGAGCCCATCTC...GCATCTCTGAAACGTCCTTTTCTTCTGAGAGCCCAGAGGGAGCCTGTACCAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CAA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTGGTTCCGATTTTATATaGCTACATATGCCCGTGGAC +
Preference number: 5 (lower is better)
Translates to: CAGPHHRTDDATLGLASAGSDFI*LHMPVD
Trigger: GTCCACGGGCATATGTAGCAATATAAAATCGGAACC...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTCTGGTCATAGGAAACTaGTTTCATGCCCAGTTCACA +
Preference number: 5 (lower is better)
Translates to: CAGPHHRTDDATLGLASALVIGN*FHAQFT
Trigger: TGTGAACTGGGCATGAAACAAGTTTCCTATGACCAG...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTGCCCCCAATCTGTGTTaGTCATGCATGTTATGTTTG +
Preference number: 5 (lower is better)
Translates to: CAGPHHRTDDATLGLASAAPNLC*SCMLCL
Trigger: CAAACATAACATGCATGACAAACACAGATTGGGGGC...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS GCA 90 bp CTCGGCCCAGGTGCGGTCCTTCTTCTTCCTCTTGTCTTTCATGTTTaGATCTCATTGATGGTTCTGATGATGACGTGGGGGATTCCACGG +
Preference number: 5 (lower is better)
Translates to: LGPGAVLLLPLVFHV*ISLMVLMMTWGIPR
Trigger: CCGTGGAATCCCCCACGTCATCATCAGAACCATCAATGAGATGCAAACATGAAAGACAAGAGGAAGAAGAAGGACCGCACCTGGGCCGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS GCA 90 bp ATTGGAGGAAGATCCTTCATACACACCAACGCTGTCTCCAAGCCATaGCGGGGTCAGAAACGGACACTGCCAACCTTAATCTGGGCTTTC +
Preference number: 5 (lower is better)
Translates to: IGGRSFIHTNAVSKP*RGQKRTLPTLIWAF
Trigger: GAAAGCCCAGATTAAGGTTGGCAGTGTCCGTTTCTGACCCCGGCATGGCTTGGAGACAGCGTTGGTGTGTATGAAGGATCTTCCTCCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585426.5
CDS CCA 90 bp CCAGAGTCCCTGCCAAGTAGCCCTTACCATCTGGATTTGGAGAGCTaGGCGGAATTTCAACGTTTCTCTCTGGTGCTGTTTTACCCACTG +
Preference number: 5 (lower is better)
Translates to: PESLPSSPYHLDLES*AEFQRFSLVLFYPL
Trigger: CAGTGGGTAAAACAGCACCAGAGAGAAACGTTGAAATTCCGCCCAGCTCTCCAAATCCAGATGGTAAGGGCTACTTGGCAGGGACTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS CCA 90 bp GAGTGGTGCCAGAGTCCCTGCCAAGTAGCCCTTACCATCTGGATTTaGAGAGCTGGGCGGAATTTCAACGTTTCTCTCTGGTGCTGTTTT +
Preference number: 5 (lower is better)
Translates to: EWCQSPCQVALTIWI*RAGRNFNVSLWCCF
Trigger: AAAACAGCACCAGAGAGAAACGTTGAAATTCCGCCCAGCTCTCCAAATCCAGATGGTAAGGGCTACTTGGCAGGGACTCTGGCACCACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS CCA 90 bp TGTGTGCAGTGCCTCCCACCTCATCACCTTCTTTCATGGGCATATTaGGGGATAACATGTTGGCTAACCTTAGCTGGTGAGGTGCTGAGG +
Preference number: 5 (lower is better)
Translates to: CVQCLPPHHLLSWAY*GITCWLTLAGEVLR
Trigger: CCTCAGCACCTCACCAGCTAAGGTTAGCCAACATGTTATCCCCCAATATGCCCATGAAAGAAGGTGATGAGGTGGGAGGCACTGCACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTACACGAGGAACAGTCTaGTTTACCATCATTGAGACT +
Preference number: 5 (lower is better)
Translates to: CAGPHHRTDDATLGLASATRGTV*FTIIET
Trigger: AGTCTCAATGATGGTAAACAAGACTGTTCCTCGTGT...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp TGCTCTTTGATGTGTGCCAGAGTTCTCGTCTTTCCACCCTCTCCTGGACTTCCCCATGCTTTTTGGCTGTaGTTCTGCCAAGGCTGTCTG +
Preference number: 5 (lower is better)
Translates to: CSLMCARVLVFPPSPGLPHAFWL*FCQGCL
Trigger: CAGACAGCCTTGGCAGAACAACAGCCAAAAAGCATG...GGGAAGTCCAGGAGAGGGTGGAAAGACGAGAACTCTGGCACACATCAAAGAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CAA 90 bp TCCTGGACTTCCCATGGCTCCAGAGACAATGCTCGCTGCAGCAGCCACAGCAGCGATGTTAAAGGTAAGTaGGATACTGGTGATGCTTCA +
Preference number: 5 (lower is better)
Translates to: SWTSHGSRDNARCSSHSSDVKGK*DTGDAS
Trigger: TGAAGCATCACCAGTATCCAACTTACCTTTAACATC...GCTGCTGTGGCTGCTGCAGCGAGCATTGTCTCTGGAGCCATGGGAAGTCCAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CAA 90 bp GTTCTCGTCTTTCCACCCTCTCCTGGACTTCCCATGGCTCCAGAGACAATGCTCAAGCAAGTTCTGGAATaGAAGCAGGGTAGGGCTTCT +
Preference number: 5 (lower is better)
Translates to: VLVFPPSPGLPMAPETMLKQVLE*KQGRAS
Trigger: AGAAGCCCTACCCTGCTTCAATTCCAGAACTTGCTT...GAGCATTGTCTCTGGAGCCATGGGAAGTCCAGGAGAGGGTGGAAAGACGAGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CAA 90 bp GACAGATGTGCTAGTGGATGCTCGAGACTCAGGTTTGGAGACTGGTTGGCTCTTATCCCATCAGGTGACTaGGAGGGCTCTGATGACTTG +
Preference number: 5 (lower is better)
Translates to: DRCASGCSRLRFGDWLALIPSGD*EGSDDL
Trigger: CAAGTCATCAGAGCCCTCCAAGTCACCTGATGGGAT...AAGAGCCAACCAGTCTCCAAACCTGAGTCTCGAGCATCCACTAGCACATCTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CAA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTGATTCCAAAGCTGTGTaGCTCTGCAGTTTTTCTCTT +
Preference number: 5 (lower is better)
Translates to: CAGPHHRTDDATLGLASADSKAV*LCSFSL
Trigger: AAGAGAAAAACTGCAGAGCAACACAGCTTTGGAATC...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTAGGTTTGGAGACTGGTaGGCTCTTGATTATAAAAGG +
Preference number: 5 (lower is better)
Translates to: CAGPHHRTDDATLGLASARFGDW*ALDYKR
Trigger: CCTTTTATAATCAAGAGCCAACCAGTCTCCAAACCT...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp GGGGTTCTTCATGAGAATTGGTTAGACTTTCAGCCTCCTCAGAAAATTCAGGTACTGGGCCCGAGCTTGTaGGGCCCGGGCCTTGATATC +
Preference number: 5 (lower is better)
Translates to: GVLHENWLDFQPPQKIQVLGPSL*GPGLDI
Trigger: GATATCAAGGCCCGGGCCCAACAAGCTCGGGCCCAG...TACCTGAATTTTCTGAGGAGGCTGAAAGTCTAACCAATTCTCATGAAGAACCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CAA 90 bp AACAAAATGTTGTCTCAAGGGAGGCTGGAGTACATGATTCTTCTGATGTGGACTCTGGGCCCGAGCTTGTaGGGCCCGGGCCTTGATATC +
Preference number: 5 (lower is better)
Translates to: NKMLSQGRLEYMILLMWTLGPSL*GPGLDI
Trigger: GATATCAAGGCCCGGGCCCAACAAGCTCGGGCCCAG...AGTCCACATCAGAAGAATCATGTACTCCAGCCTCCCTTGAGACAACATTTTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CAA 90 bp ACAATGAAGGAACTGATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCTCGCTGGGCCCGAGCTaGTTGGGCCCGGGCCTTGAT +
Preference number: 5 (lower is better)
Translates to: TMKELIMSSVSHQPQLYLSLGPS*LGPGLD
Trigger: ATCAAGGCCCGGGCCCAACAAGCTCGGGCCCAGCGA...GAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTATCAGTTCCTTCATTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTTCAGAAGGAAATCTGTaGTTAATTCCCATTGGGGGA +
Preference number: 5 (lower is better)
Translates to: CAGPHHRTDDATLGLASASEGNL*LIPIGG
Trigger: TCCCCCAATGGGAATTAACAACAGATTTCCTTCTGA...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTAGCAAATCCGGTTACTaGGGTTATACTGATTGCTAC +
Preference number: 5 (lower is better)
Translates to: CAGPHHRTDDATLGLASASKSGY*GYTDCY
Trigger: GTAGCAATCAGTATAACCCAAGTAACCGGATTTGCT...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS GCA 90 bp CTTTCAGCCGGCAAGAGCATTTCAGTTCCAATTCATCTGCATTGCTaGTGTCGGCAAAGTTCTGAACGGGCATCTGAGCGTTCTGACCAG +
Preference number: 5 (lower is better)
Translates to: LSAGKSISVPIHLHC*CRQSSERASERSDQ
Trigger: CTGGTCAGAACGCTCAGATGCCCGTTCAGAACTTTGCCGACAGCAGCAATGCAGATGAATTGGAACTGAAATGCTCTTGCCGGCTGAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS GCA 90 bp TGGCTTTCAGCCGGCAAGAGCATTTCAGTTCCAATTCATCTGCATTaGTGCTGTCGGCAAAGTTCTGAACGGGCATCTGAGCGTTCTGAC +
Preference number: 5 (lower is better)
Translates to: WLSAGKSISVPIHLH*CCRQSSERASERSD
Trigger: GTCAGAACGCTCAGATGCCCGTTCAGAACTTTGCCGACAGCAGCAATGCAGATGAATTGGAACTGAAATGCTCTTGCCGGCTGAAAGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS CCA 90 bp ATACTGATTGCTACAGGTTGTGTCTGCTTCACTTTTGAAAGGAGCTaGGCCACGTGCCTGCTCAGCAAAGTTATGACTGGGAGCAGTCGG +
Preference number: 5 (lower is better)
Translates to: ILIATGCVCFTFERS*ATCLLSKVMTGSSR
Trigger: CCGACTGCTCCCAGTCATAACTTTGCTGAGCAGGCACGTGGCCCAGCTCCTTTCAAAAGTGAAGCAGACACAACCTGTAGCAATCAGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp GTTGTTCTGCCAAGGCTGTCTGTGCAGAAACTGGAAGGCCAGAAGTCCCACATGTCAATGTCCTCAGCTTaGGTCCATTTCAAGTGCCCT +
Preference number: 5 (lower is better)
Translates to: VVLPRLSVQKLEGQKSHMSMSSA*VHFKCP
Trigger: AGGGCACTTGAAATGGACCAAAGCTGAGGACATTGA...CATGTGGGACTTCTGGCCTTCCAGTTTCTGCACAGACAGCCTTGGCAGAACAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592288.6
ENST00000593195.6
CDS-3UTR CAA 90 bp GTTGTTCTGCCAAGGCTGTCTGTGCAGAAACTGGAAGGCCAGAAGTCCCACATGGCCCTCAAGTTAGTGTaGACAAGAATAGATCCTGGG +
Preference number: 5 (lower is better)
Translates to: VVLPRLSVQKLEGQKSHMALKLV*TRIDPG
Trigger: CCCAGGATCTATTCTTGTCAACACTAACTTGAGGGC...CATGTGGGACTTCTGGCCTTCCAGTTTCTGCACAGACAGCCTTGGCAGAACAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592288.6
ENST00000593195.6
CDS-3UTR CAA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTTGTTGGGCCCGGGCCTaGATATCTGCGAGGGTCCTG +
Preference number: 5 (lower is better)
Translates to: FKKIWPTSARSEARMNGCCWARA*ISARVL
Trigger: CAGGACCCTCGCAGATATCAAGGCCCGGGCCCAACA...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp ACAATGAAGGAACTGATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCCTGGGCCCGAGCTTGTaGGGCCCGGGCCTTGATATC +
Preference number: 5 (lower is better)
Translates to: TMKELIMSSVSHQPQLYLLGPSL*GPGLDI
Trigger: GATATCAAGGCCCGGGCCCAACAAGCTCGGGCCCAG...GAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTATCAGTTCCTTCATTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp GAATATCCAAGGTCCAGCAGTCAACTAAACTTTCTATATAGCTCATCCCAGAAATCGCTGGGCCCGAGCTaGTTGGGCCCGGGCCTTGAT +
Preference number: 5 (lower is better)
Translates to: EYPRSSSQLNFLYSSSQKSLGPS*LGPGLD
Trigger: ATCAAGGCCCGGGCCCAACAAGCTCGGGCCCAGCGA...TTTCTGGGATGAGCTATATAGAAAGTTTAGTTGACTGCTGGACCTTGGATATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp CTTTGTCTGCTCTTTGATGTGTGCCAGAGTTCTCGTCTTTCCACCCTCTCCTGGGCCTTTGTCTGCTCTTaGATGTGTGCCAGAGTTCTC +
Preference number: 5 (lower is better)
Translates to: LCLLFDVCQSSRLSTLSWAFVCS*MCARVL
Trigger: GAGAACTCTGGCACACATCAAAGAGCAGACAAAGGC...CCAGGAGAGGGTGGAAAGACGAGAACTCTGGCACACATCAAAGAGCAGACAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CAA 90 bp TACAGTGGTGGTCTCCCGGAGGTGGGCAGACTTGTTGCTAGGAGATCTACAGTTAAGAGACTTCTAAGTTaGGAGGCCCTTCCTTTGAGC +
Preference number: 5 (lower is better)
Translates to: YSGGLPEVGRLVARRSTVKRLLS*EALPLS
Trigger: GCTCAAAGGAAGGGCCTCCAAACTTAGAAGTCTCTT...AACTGTAGATCTCCTAGCAACAAGTCTGCCCACCTCCGGGAGACCACCACTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CAA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTCTTTTGAACTTGCTTTaGAAAACAGAGCCTCCTGAA +
Preference number: 5 (lower is better)
Translates to: CAGPHHRTDDATLGLASALLNLL*KTEPPE
Trigger: TTCAGGAGGCTCTGTTTTCAAAAGCAAGTTCAAAAG...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS TCA 90 bp ATTGATCGGTTTATGGCTGCTGGTGCAAAGCCCCCTGGTGGTTGCTaGGGTTTTCCAGAATTATCTGCCCTGTTTCGAGGCCCTGAATTT +
Preference number: 5 (lower is better)
Translates to: IDRFMAAGAKPPGGC*GFPELSALFRGPEF
Trigger: AAATTCAGGGCCTCGAAACAGGGCAGATAATTCTGGAAAACCTCAGCAACCACCAGGGGGCTTTGCACCAGCAGCCATAAACCGATCAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS GCA 90 bp GTTTATTGTCAGCATGTTTCCAGTAAACATTGCGACGGTCGGGTGTaGAACCAGAGAGTCTGTGACCGCTACAGAATCACTGCAGCTGAG +
Preference number: 5 (lower is better)
Translates to: VYCQHVSSKHCDGRV*NQRVCDRYRITAAE
Trigger: CTCAGCTGCAGTGATTCTGTAGCGGTCACAGACTCTCTGGTTGCACACCCGACCGTCGCAATGTTTACTGGAAACATGCTGACAATAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS GCA 90 bp GGTGCTGAGGAAAGACTAACCTCTCCCAATCCCTTCTGTTCAAGATaGCTGTTGAAGGCAAATGCATTACACCCCACTGGGGTCTTGGAA +
Preference number: 5 (lower is better)
Translates to: GAEERLTSPNPFCSR*LLKANALHPTGVLE
Trigger: TTCCAAGACCCCAGTGGGGTGTAATGCATTTGCCTTCAACAGGCATCTTGAACAGAAGGGATTGGGAGAGGTTAGTCTTTCCTCAGCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS CCA 90 bp TTGGCATTGTGTGTGCAGTGCCTCCCACCTCATCACCTTCTTTCATaGGCATATTGGGGGATAACATGTTGGCTAACCTTAGCTGGTGAG +
Preference number: 5 (lower is better)
Translates to: LALCVQCLPPHHLLS*AYWGITCWLTLAGE
Trigger: CTCACCAGCTAAGGTTAGCCAACATGTTATCCCCCAATATGCCCATGAAAGAAGGTGATGAGGTGGGAGGCACTGCACACACAATGCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS CCA 90 bp CAAAGTTCTGAACGGGCATCTGAGCGTTCTGACCAGACAAGCCTGTaGCAGGATTGGAGCCACTTCCCAAAATCCCAATGGACTTTTCAA +
Preference number: 5 (lower is better)
Translates to: QSSERASERSDQTSL*QDWSHFPKSQWTFQ
Trigger: TTGAAAAGTCCATTGGGATTTTGGGAAGTGGCTCCAATCCTGCCACAGGCTTGTCTGGTCAGAACGCTCAGATGCCCGTTCAGAACTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp ACAGTGGTGGTCTCCCGGAGGTGGGCAGACTTGTTGCTAGGAGATCTACAGTTTTCTGCTTTGCTGTCATaGGTGAGTTGGGGTGTTTTT +
Preference number: 5 (lower is better)
Translates to: TVVVSRRWADLLLGDLQFSALLS*VSWGVF
Trigger: AAAAACACCCCAACTCACCAATGACAGCAAAGCAGA...AAACTGTAGATCTCCTAGCAACAAGTCTGCCCACCTCCGGGAGACCACCACTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CAA 90 bp TTACTTGGGTTAAGAGACTGCTGTAGTACAGTGGTGGTCTCCCGGAGGTGGGCAGACCCTGTTTTTATTTaGGGGGTACTGGTCTCTACT +
Preference number: 5 (lower is better)
Translates to: LLGLRDCCSTVVVSRRWADPVFI*GVLVST
Trigger: AGTAGAGACCAGTACCCCCAAAATAAAAACAGGGTC...TGCCCACCTCCGGGAGACCACCACTGTACTACAGCAGTCTCTTAACCCAAGTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CAA 90 bp CTTGGGTTAAGAGACTGCTGTAGTACAGTGGTGGTCTCCCGGAGGTGGGCAGACCAGGTGAAGTGGATATaGGAGATATTTCTGACATCA +
Preference number: 5 (lower is better)
Translates to: LGLRDCCSTVVVSRRWADQVKWI*EIFLTS
Trigger: TGATGTCAGAAATATCTCCAATATCCACTTCACCTG...GTCTGCCCACCTCCGGGAGACCACCACTGTACTACAGCAGTCTCTTAACCCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CAA 90 bp GACAGATGTGCTAGTGGATGCTCGAGACTCAGGTTTGGAGACTGGTTGGCTCTTAAGCAAGTTCTGGAATaGAAGCAGGGTAGGGCTTCT +
Preference number: 5 (lower is better)
Translates to: DRCASGCSRLRFGDWLALKQVLE*KQGRAS
Trigger: AGAAGCCCTACCCTGCTTCAATTCCAGAACTTGCTT...AAGAGCCAACCAGTCTCCAAACCTGAGTCTCGAGCATCCACTAGCACATCTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CAA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTACTCTGTGTACTCCCTaGCTTATGTGTTTTATTTCT +
Preference number: 5 (lower is better)
Translates to: CAGPHHRTDDATLGLASATLCTP*LMCFIS
Trigger: AGAAATAAAACACATAAGCAAGGGAGTACACAGAGT...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp GTTCCTCCCGCCACTGACAGATGTGCTAGTGGATGCTCGAGACTCAGGTTTGGAAGGTTTGGAGACTGGTaGGCTCTTGATTATAAAAGG +
Preference number: 5 (lower is better)
Translates to: VPPATDRCASGCSRLRFGRFGDW*ALDYKR
Trigger: CCTTTTATAATCAAGAGCCAACCAGTCTCCAAACCT...TCCAAACCTGAGTCTCGAGCATCCACTAGCACATCTGTCAGTGGCGGGAGGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CAA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTTGTTGGGCCCGGGCCTaGATATCTGCGAGGGTCCTG +
Preference number: 5 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPCWARA*ISARVL
Trigger: CAGGACCCTCGCAGATATCAAGGCCCGGGCCCAACA...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp AACATCATTCATCATAACACAGGATTCCAAGTTATCTTCAGGAGGTGCTATTTGTCGCTGGGCCCGAGCTaGTTGGGCCCGGGCCTTGAT +
Preference number: 5 (lower is better)
Translates to: NIIHHNTGFQVIFRRCYLSLGPS*LGPGLD
Trigger: ATCAAGGCCCGGGCCCAACAAGCTCGGGCCCAGCGA...CAAATAGCACCTCCTGAAGATAACTTGGAATCCTGTGTTATGATGAATGATGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CAA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTATTCCGATGGAGGGAGTaGGCACAGAGGTGTACTGAG +
Preference number: 5 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVFRWRE*AQRCTE
Trigger: CTCAGTACACCTCTGTGCCAACTCCCTCCATCGGAA...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTTACCAAAGTGTATTGTaGGATAATTTCCACAGAGCT +
Preference number: 5 (lower is better)
Translates to: CAGPHHRTDDATLGLASAYQSVL*DNFHRA
Trigger: AGCTCTGTGGAAATTATCCAACAATACACTTTGGTA...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp TGTGCTGGGCCTCACCACCGTACAGACGATGCTACCCTAGGCTTGGCTTCAGCTGCATTATTCTATTTGTaGTTGCTGATGCTATTTGGC +
Preference number: 5 (lower is better)
Translates to: CAGPHHRTDDATLGLASAALFYL*LLMLFG
Trigger: GCCAAATAGCATCAGCAACAACAAATAGAATAATGC...AGCTGAAGCCAAGCCTAGGGTAGCATCGTCTGTACGGTGGTGAGGCCCAGCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS TCA 90 bp TCACTTTTGAAAGGAGCTGGGCCACGTGCCTGCTCAGCAAAGTTATaGCTGGGAGCAGTCGGCTCATTTAATTTATCTGGAACAAGGGGT +
Preference number: 5 (lower is better)
Translates to: SLLKGAGPRACSAKL*LGAVGSFNLSGTRG
Trigger: ACCCCTTGTTCCAGATAAATTAAATGAGCCGACTGCTCCCAGTCATAACTTTGCTGAGCAGGCACGTGGCCCAGCTCCTTTCAAAAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS TCA 90 bp CTTCAGGGCATCGGTAGCCAAGGAAATAGCCTCTTCCATGGGACTTaGGGTGGAAGCTTTCATGTTCTGTGTTTGTTGTACACTAGAGGC +
Preference number: 5 (lower is better)
Translates to: LQGIGSQGNSLFHGT*GGSFHVLCLLYTRG
Trigger: GCCTCTAGTGTACAACAAACACAGAACATGAAAGCTTCCACCTCAAGTCCCATGGAAGAGGCTATTTCCTTGGCTACCGATGCCCTGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS GCA 90 bp AATCATGGCTTTCAGCCGGCAAGAGCATTTCAGTTCCAATTCATCTaGATTGCTGCTGTCGGCAAAGTTCTGAACGGGCATCTGAGCGTT +
Preference number: 5 (lower is better)
Translates to: NHGFQPARAFQFQFI*IAAVGKVLNGHLSV
Trigger: AACGCTCAGATGCCCGTTCAGAACTTTGCCGACAGCAGCAATGCAGATGAATTGGAACTGAAATGCTCTTGCCGGCTGAAAGCCATGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS CCA 90 bp GTTAATTCCCATTGGGGGAATCAAGACAGAGCTAGTGGAGAGGTTTaGCAAATTGTTTCCGATGGAGGGAGTTGGCACAGAGGTGTACTG +
Preference number: 5 (lower is better)
Translates to: VNSHWGNQDRASGEV*QIVSDGGSWHRGVL
Trigger: CAGTACACCTCTGTGCCAACTCCCTCCATCGGAAACAATTTGCCAAACCTCTCCACTAGCTCTGTCTTGATTCCCCCAATGGGAATTAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp ACAGTGGTGGTCTCCCGGAGGTGGGCAGACTTGTTGCTAGGAGATCTACAGTTTTTCAGGAGGTGCTATTaGGGGTTCTTCATGAGAATT +
Preference number: 5 (lower is better)
Translates to: TVVVSRRWADLLLGDLQFFRRCY*GFFMRI
Trigger: AATTCTCATGAAGAACCCCAAATAGCACCTCCTGAA...AAACTGTAGATCTCCTAGCAACAAGTCTGCCCACCTCCGGGAGACCACCACTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CAA 90 bp AGGTTTGGCAGTGGCGGAAGACTCATCTTTCTGCGGGGAGAGTGGCTCTTCAGACAGGTGAAGTGGATATaGGAGATATTTCTGACATCA +
Preference number: 5 (lower is better)
Translates to: RFGSGGRLIFLRGEWLFRQVKWI*EIFLTS
Trigger: TGATGTCAGAAATATCTCCAATATCCACTTCACCTG...TCTGAAGAGCCACTCTCCCCGCAGAAAGATGAGTCTTCCGCCACTGCCAAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CAA 90 bp GGCAGGCTGGTACAGGCTCCCTCTGGGCTCTCAGAAGAAAAGGACGTTTCAGAGGATGTTAATGGTAAGTaGGACATAAGAGATGCTTCT +
Preference number: 5 (lower is better)
Translates to: GRLVQAPSGLSEEKDVSEDVNGK*DIRDAS
Trigger: AGAAGCATCTCTTATGTCCAACTTACCATTAACATC...CTCTGAAACGTCCTTTTCTTCTGAGAGCCCAGAGGGAGCCTGTACCAGCCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CAA 90 bp ACAGTGGTGGTCTCCCGGAGGTGGGCAGACTTGTTGCTAGGAGATCTACAGTTTAGGTTTGGAGACTGGTaGGCTCTTGATTATAAAAGG +
Preference number: 5 (lower is better)
Translates to: TVVVSRRWADLLLGDLQFRFGDW*ALDYKR
Trigger: CCTTTTATAATCAAGAGCCAACCAGTCTCCAAACCT...AAACTGTAGATCTCCTAGCAACAAGTCTGCCCACCTCCGGGAGACCACCACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CAA 90 bp GGCGAATCCGACTGCTCATCAGACACCTTTAATGGTGTCAAAACAACACGAGGAGCCTTTGTCTGCTCTTaGATGTGTGCCAGAGTTCTC +
Preference number: 5 (lower is better)
Translates to: GESDCSSDTFNGVKTTRGAFVCS*MCARVL
Trigger: GAGAACTCTGGCACACATCAAAGAGCAGACAAAGGC...TCCTCGTGTTGTTTTGACACCATTAAAGGTGTCTGATGAGCAGTCGGATTCGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CAA 90 bp AGAAACCAGGCTCTGGAGAAGCTGGGCTTTTCATGCTTTTTGGCTGTTGTTCTGGAGATGGGCTCGAGCTaGATGCTTTGCAAAGAGCTT +
Preference number: 5 (lower is better)
Translates to: RNQALEKLGFSCFLAVVLEMGSS*MLCKEL
Trigger: AAGCTCTTTGCAAAGCATCAAGCTCGAGCCCATCTC...CAGAACAACAGCCAAAAAGCATGAAAAGCCCAGCTTCTCCAGAGCCTGGTTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CAA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACATGCGTCACCAGCGGATaGTTAGCCTCCACAGAGGAC +
Preference number: 5 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTCVTSG*LASTED
Trigger: GTCCTCTGTGGAGGCTAACAATCCGCTGGTGACGCA...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTCACCCCACTGGGGTCTaGGAAGAGGCCTGTAACAGA +
Preference number: 5 (lower is better)
Translates to: FKKIWPTSARSEARMNGCHPTGV*EEACNR
Trigger: TCTGTTACAGGCCTCTTCCAAGACCCCAGTGGGGTG...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS TCA 90 bp TGGCCGGCAATGTTTTACTGTCTTGTTTTGCTGCCGAAGCAGCAATaGAAGTGGAACTGTGATCTATACCTTCGTTGGCAACTGGCTCAG +
Preference number: 5 (lower is better)
Translates to: WPAMFYCLVLLPKQQ*KWNCDLYLRWQLAQ
Trigger: CTGAGCCAGTTGCCAACGAAGGTATAGATCACAGTTCCACTTTCATTGCTGCTTCGGCAGCAAAACAAGACAGTAAAACATTGCCGGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS TCA 90 bp TGCTTGTTTAGCCATTCTTGCTTAAATGGCTGGCTGTGTCCTAGCTaGCTGATGCCGGAACTGATGACACAAGGCACCCCTTTAACATCT +
Preference number: 5 (lower is better)
Translates to: CLFSHSCLNGWLCPS*LMPELMTQGTPLTS
Trigger: AGATGTTAAAGGGGTGCCTTGTGTCATCAGTTCCGGCATCAGTCAGCTAGGACACAGCCAGCCATTTAAGCAAGAATGGCTAAACAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS TCA 90 bp TTCATGGGCATATTGGGGGATAACATGTTGGCTAACCTTAGCTGGTaGGGTGCTGAGGAAAGACTAACCTCTCCCAATCCCTTCTGTTCA +
Preference number: 5 (lower is better)
Translates to: FMGILGDNMLANLSW*GAEERLTSPNPFCS
Trigger: TGAACAGAAGGGATTGGGAGAGGTTAGTCTTTCCTCAGCACCTCACCAGCTAAGGTTAGCCAACATGTTATCCCCCAATATGCCCATGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS CCA 90 bp CGTGGACTGTGGCCAACTAAGTCTCTTAGTGGTTTCCATGGTAACTaGAGGTTGTTTTTGATCAGATGGGACTTCTGCATTAGGGAGAGG +
Preference number: 5 (lower is better)
Translates to: RGLWPTKSLSGFHGN*RLFLIRWDFCIRER
Trigger: CCTCTCCCTAATGCAGAAGTCCCATCTGATCAAAAACAACCTCCAGTTACCATGGAAACCACTAAGAGACTTAGTTGGCCACAGTCCACG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS CCA 90 bp TCCAAGCCATGCCGGGGTCAGAAACGGACACTGCCAACCTTAATCTaGGCTTTCTGTCTTCCAGAACTTGTTTCTTTTAACCCTTCTTTC +
Preference number: 5 (lower is better)
Translates to: SKPCRGQKRTLPTLI*AFCLPELVSFNPSF
Trigger: GAAAGAAGGGTTAAAAGAAACAAGTTCTGGAAGACAGAAAGCCCAGATTAAGGTTGGCAGTGTCCGTTTCTGACCCCGGCATGGCTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585426.5
CDS-3UTR CAA 90 bp GACAGATGTGCTAGTGGATGCTCGAGACTCAGGTTTGGAGACTGGTTGGCTCTTACACGAGGAACAGTCTaGTTTACCATCATTGAGACT +
Preference number: 5 (lower is better)
Translates to: DRCASGCSRLRFGDWLALTRGTV*FTIIET
Trigger: AGTCTCAATGATGGTAAACAAGACTGTTCCTCGTGT...AAGAGCCAACCAGTCTCCAAACCTGAGTCTCGAGCATCCACTAGCACATCTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CAA 90 bp CATTTTCTTCTCCATGGGCATTTGCCTCGGCCATATCTGTACCATCCAATTCAGCCTCAGAACAAAATGTaGTCTCAAGGGAGGCTGGAG +
Preference number: 5 (lower is better)
Translates to: HFLLHGHLPRPYLYHPIQPQNKM*SQGRLE
Trigger: CTCCAGCCTCCCTTGAGACAACATTTTGTTCTGAGG...CTGAATTGGATGGTACAGATATGGCCGAGGCAAATGCCCATGGAGAAGAAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CAA 90 bp AGGTTTGGCAGTGGCGGAAGACTCATCTTTCTGCGGGGAGAGTGGCTCTTCAGAGATGTTAATGGTAAGTaGGACATAAGAGATGCTTCT +
Preference number: 5 (lower is better)
Translates to: RFGSGGRLIFLRGEWLFRDVNGK*DIRDAS
Trigger: AGAAGCATCTCTTATGTCCAACTTACCATTAACATC...TCTGAAGAGCCACTCTCCCCGCAGAAAGATGAGTCTTCCGCCACTGCCAAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CAA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTTTCTCTCCCAGAGGTTaGGCAGTGGCGGAAGACTCA +
Preference number: 5 (lower is better)
Translates to: FKKIWPTSARSEARMNGCFSPRG*AVAEDS
Trigger: TGAGTCTTCCGCCACTGCCAAACCTCTGGGAGAGAA...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp ACGTTTCAGAGATGCAGGCATTTTCTGAAAGCTGTTCTTCAGGGTCACTCTGTAATCCCATCAGGTGACTaGGAGGGCTCTGATGACTTG +
Preference number: 5 (lower is better)
Translates to: TFQRCRHFLKAVLQGHSVIPSGD*EGSDDL
Trigger: CAAGTCATCAGAGCCCTCCAAGTCACCTGATGGGAT...TACAGAGTGACCCTGAAGAACAGCTTTCAGAAAATGCCTGCATCTCTGAAACGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CAA 90 bp GACAGATGTGCTAGTGGATGCTCGAGACTCAGGTTTGGAGACTGGTTGGCTCTTATGATATGTTCCGGGTaGACTGATCATCTTCTATCC +
Preference number: 5 (lower is better)
Translates to: DRCASGCSRLRFGDWLALMICSG*TDHLLS
Trigger: GGATAGAAGATGATCAGTCAACCCGGAACATATCAT...AAGAGCCAACCAGTCTCCAAACCTGAGTCTCGAGCATCCACTAGCACATCTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CAA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTAGAGATGGGCTCGAGCTaGATGCTTTGCAAAGAGCTT +
Preference number: 5 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVEMGSS*MLCKEL
Trigger: AAGCTCTTTGCAAAGCATCAAGCTCGAGCCCATCTC...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACACGGAGGTGGGCAGACTaGTTGCTAGGAGATCTACAG +
Preference number: 5 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTRRWAD*LLGDLQ
Trigger: CTGTAGATCTCCTAGCAACAAGTCTGCCCACCTCCG...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACATTCCGATGGAGGGAGTaGGCACAGAGGTGTACTGAG +
Preference number: 5 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTFRWRE*AQRCTE
Trigger: CTCAGTACACCTCTGTGCCAACTCCCTCCATCGGAA...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTACTGTTGATTTCAAGCTaGGCTCCCAATCTGGGCTGT +
Preference number: 5 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVLLISS*APNLGC
Trigger: ACAGCCCAGATTGGGAGCCAAGCTTGAAATCAACAG...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTAGGCCTAGAACCAGATaGCTGGGCATGAGTCCCATG +
Preference number: 5 (lower is better)
Translates to: FKKIWPTSARSEARMNGCRPRTR*LGMSPM
Trigger: CATGGGACTCATGCCCAGCAATCTGGTTCTAGGCCT...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS TCA 90 bp TTACTGTCTTGTTTTGCTGCCGAAGCAGCAATGAAAGTGGAACTGTaGTCTATACCTTCGTTGGCAACTGGCTCAGGCCTGCTAATCACA +
Preference number: 5 (lower is better)
Translates to: LLSCFAAEAAMKVEL*SIPSLATGSGLLIT
Trigger: TGTGATTAGCAGGCCTGAGCCAGTTGCCAACGAAGGTATAGATCACAGTTCCACTTTCATTGCTGCTTCGGCAGCAAAACAAGACAGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS TCA 90 bp CAACTAAGTCTCTTAGTGGTTTCCATGGTAACTGGAGGTTGTTTTTaGTCAGATGGGACTTCTGCATTAGGGAGAGGTGGAGGTAGCGGA +
Preference number: 5 (lower is better)
Translates to: QLSLLVVSMVTGGCF*SDGTSALGRGGGSG
Trigger: TCCGCTACCTCCACCTCTCCCTAATGCAGAAGTCCCATCTGATCAAAAACAACCTCCAGTTACCATGGAAACCACTAAGAGACTTAGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS GCA 90 bp GAGACTTGTGCAGGTGGCCGGCAATGTTTTACTGTCTTGTTTTGCTaGCGAAGCAGCAATGAAAGTGGAACTGTGATCTATACCTTCGTT +
Preference number: 5 (lower is better)
Translates to: ETCAGGRQCFTVLFC*RSSNESGTVIYTFV
Trigger: AACGAAGGTATAGATCACAGTTCCACTTTCATTGCTGCTTCGGCAGCAAAACAAGACAGTAAAACATTGCCGGCCACCTGCACAAGTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS GCA 90 bp CTCAGGGCCAGGGAAGTCTTCAGTGTCCATTCTAAAGCCCTTGTCTaGTTCGTGAAGTTCAGATTTCACAGGAAGAGCAACATTTGTTAC +
Preference number: 5 (lower is better)
Translates to: LRAREVFSVHSKALV*FVKFRFHRKSNICY
Trigger: GTAACAAATGTTGCTCTTCCTGTGAAATCTGAACTTCACGAAGCAGACAAGGGCTTTAGAATGGACACTGAAGACTTCCCTGGCCCTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp CCATCAGGTGACTTGGAGGGCTCTGATGACTTGGAAGTATGTGAGGTTTCTAACGACTTTCCAGGGATTTaGAAGAATGTTCCATCCCCT +
Preference number: 5 (lower is better)
Translates to: PSGDLEGSDDLEVCEVSNDFPGI*KNVPSP
Trigger: AGGGGATGGAACATTCTTCAAAATCCCTGGAAAGTC...GTTAGAAACCTCACATACTTCCAAGTCATCAGAGCCCTCCAAGTCACCTGATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CAA 90 bp CTGATGACTTGGAAGTATGTGAGGTTTCTAACCGACTCTGTGTACTCCCTTGCTTCAATGTCCTCAGCTTaGGTCCATTTCAAGTGCCCT +
Preference number: 5 (lower is better)
Translates to: LMTWKYVRFLTDSVYSLASMSSA*VHFKCP
Trigger: AGGGCACTTGAAATGGACCAAAGCTGAGGACATTGA...AGCAAGGGAGTACACAGAGTCGGTTAGAAACCTCACATACTTCCAAGTCATCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592288.6
ENST00000593195.6
CDS-3UTR CAA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTATCAATGTCCTCAGCTTaGGTCCATTTCAAGTGCCCT +
Preference number: 5 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVSMSSA*VHFKCP
Trigger: AGGGCACTTGAAATGGACCAAAGCTGAGGACATTGA...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTAGCCCTCAAGTTAGTGTaGACAAGAATAGATCCTGGG +
Preference number: 5 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVALKLV*TRIDPG
Trigger: CCCAGGATCTATTCTTGTCAACACTAACTTGAGGGC...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp AGCACAGAAACCAGGCTCTGGAGAAGCTGGGCTTTTCATGCTTTTTGGCTGTTGTTCCTTCTCAATTTCTaGCCTTATCCGCAACTGCAT +
Preference number: 5 (lower is better)
Translates to: STETRLWRSWAFHAFWLLFLLNF*PYPQLH
Trigger: ATGCAGTTGCGGATAAGGCAAGAAATTGAGAAGGAA...CAACAGCCAAAAAGCATGAAAAGCCCAGCTTCTCCAGAGCCTGGTTTCTGTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CAA 90 bp TGCTGCTGCCTCAAAGCCTGTTTAAGAGCCTTTTTGGTGTGCTGCTGGAAGGAATTCCTTCTCAATTTCTaGCCTTATCCGCAACTGCAT +
Preference number: 5 (lower is better)
Translates to: CCCLKACLRAFLVCCWKEFLLNF*PYPQLH
Trigger: ATGCAGTTGCGGATAAGGCAAGAAATTGAGAAGGAA...TTCCTTCCAGCAGCACACCAAAAAGGCTCTTAAACAGGCTTTGAGGCAGCAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CAA 90 bp TTTGCTGACTCAGGGTCTTATTGTGCAAATCTTCAGACGGAAATGCTTCAGGAGCATGCTTTTTGGCTGTaGTTCTGCCAAGGCTGTCTG +
Preference number: 5 (lower is better)
Translates to: FADSGSYCANLQTEMLQEHAFWL*FCQGCL
Trigger: CAGACAGCCTTGGCAGAACAACAGCCAAAAAGCATG...CTCCTGAAGCATTTCCGTCTGAAGATTTGCACAATAAGACCCTGAGTCAGCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CAA 90 bp AAACTCCATTTTCTTCTCCATGGGCATTTGCCTCGGCCATATCTGTACCATCCAGGCTTTTCATGCTTTTaGGCTGTTGTTCTGCCAAGG +
Preference number: 5 (lower is better)
Translates to: KLHFLLHGHLPRPYLYHPGFSCF*AVVLPR
Trigger: CCTTGGCAGAACAACAGCCAAAAAGCATGAAAAGCC...TGGATGGTACAGATATGGCCGAGGCAAATGCCCATGGAGAAGAAAATGGAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CAA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTTTCTCTCCCAGAGGTTaGGCAGTGGCGGAAGACTCA +
Preference number: 5 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPFSPRG*AVAEDS
Trigger: TGAGTCTTCCGCCACTGCCAAACCTCTGGGAGAGAA...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp GCAGTTTCTGGAAGTTTACTTGGGTTAAGAGACTGCTGTAGTACAGTGGTGGTCGAGGGCTCTGATGACTaGGAAGTATGTGAGGTTTCT +
Preference number: 5 (lower is better)
Translates to: AVSGSLLGLRDCCSTVVVEGSDD*EVCEVS
Trigger: AGAAACCTCACATACTTCCAAGTCATCAGAGCCCTC...GACCACCACTGTACTACAGCAGTCTCTTAACCCAAGTAAACTTCCAGAAACTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CAA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACAATCCCATCAGGTGACTaGGAGGGCTCTGATGACTTG +
Preference number: 5 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTIPSGD*EGSDDL
Trigger: CAAGTCATCAGAGCCCTCCAAGTCACCTGATGGGAT...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp GATGACTTGGAAGTATGTGAGGTTTCTAACCGACTCTGTGTACTCCCTTGCTTAGAGATGGGCTCGAGCTaGATGCTTTGCAAAGAGCTT +
Preference number: 5 (lower is better)
Translates to: DDLEVCEVSNRLCVLPCLEMGSS*MLCKEL
Trigger: AAGCTCTTTGCAAAGCATCAAGCTCGAGCCCATCTC...TAAGCAAGGGAGTACACAGAGTCGGTTAGAAACCTCACATACTTCCAAGTCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CAA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTAAGGTGGGCAGACTTGTaGCTAGGAGATCTACAGTTT +
Preference number: 5 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVRWADL*LGDLQF
Trigger: AAACTGTAGATCTCCTAGCAACAAGTCTGCCCACCT...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp TCACTCTGTAGCTCCATATCTATAGCAATTCCTTCATTTGGAAACTGGCCTTCTCGGAGGTGGGCAGACTaGTTGCTAGGAGATCTACAG +
Preference number: 5 (lower is better)
Translates to: SLCSSISIAIPSFGNWPSRRWAD*LLGDLQ
Trigger: CTGTAGATCTCCTAGCAACAAGTCTGCCCACCTCCG...AGAAGGCCAGTTTCCAAATGAAGGAATTGCTATAGATATGGAGCTACAGAGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CAA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTAGAGAGGTTTGGCAAATaGTTTCCGATGGAGGGAGTT +
Preference number: 5 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVERFGK*FPMEGV
Trigger: AACTCCCTCCATCGGAAACAATTTGCCAAACCTCTC...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp ACAATGAAGGAACTGATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCGTAATTCTCGGAGACTaGTGCAGGTGGCCGGCAATG +
Preference number: 5 (lower is better)
Translates to: TMKELIMSSVSHQPQLYLVILGD*CRWPAM
Trigger: CATTGCCGGCCACCTGCACAAGTCTCCGAGAATTAC...GAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTATCAGTTCCTTCATTGT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACAGTGTCTGCTTCACTTTaGAAAGGAGCTGGGCCACGT +
Preference number: 5 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTVSASL*KGAGPR
Trigger: ACGTGGCCCAGCTCCTTTCAAAAGTGAAGCAGACAC...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTGTGTCTGCTTCACTTTaGAAAGGAGCTGGGCCACGT +
Preference number: 5 (lower is better)
Translates to: FKKIWPTSARSEARMNGCVSASL*KGAGPR
Trigger: ACGTGGCCCAGCTCCTTTCAAAAGTGAAGCAGACAC...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp AATATATGGAATGTAGCTCAAATACTCAACACGCAGACTTTACTGGATGCACACTGCGTCACCAGCGGATaGTTAGCCTCCACAGAGGAC +
Preference number: 5 (lower is better)
Translates to: NIWNVAQILNTQTLLDAHCVTSG*LASTED
Trigger: GTCCTCTGTGGAGGCTAACAATCCGCTGGTGACGCA...GTGTGCATCCAGTAAAGTCTGCGTGTTGAGTATTTGAGCTACATTCCATATATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTGGCAGCCACAGGCATTaGGTAAAACTGCTGTCTGTG +
Preference number: 5 (lower is better)
Translates to: FKKIWPTSARSEARMNGCGSHRH*VKLLSV
Trigger: CACAGACAGCAGTTTTACCAAATGCCTGTGGCTGCC...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACAGTGCTTTGTTTGGCATaGTGTGTGCAGTGCCTCCCA +
Preference number: 5 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTVLCLA*CVQCLP
Trigger: TGGGAGGCACTGCACACACAATGCCAAACAAAGCAC...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACAAAGCCTGTGGCAGGATaGGAGCCACTTCCCAAAATC +
Preference number: 5 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTKPVAG*EPLPKI
Trigger: GATTTTGGGAAGTGGCTCCAATCCTGCCACAGGCTT...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp GGAAGGAATGAACGGAACCACTCCAATGCAATCCCAGCCACTCCTGCTAGTTCAAATCATCATGGAAAGTaGTCCCAAATCCTTCATTGG +
Preference number: 5 (lower is better)
Translates to: GRNERNHSNAIPATPASSNHHGK*SQILHW
Trigger: CCAATGAAGGATTTGGGACAACTTTCCATGATGATT...TGAACTAGCAGGAGTGGCTGGGATTGCATTGGAGTGGTTCCGTTCATTCCTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
CDS GCA 90 bp GTTGTTGCTGATGCTATTTGGCTTTTCCGTGTGGAAAAGGGATACTaGATCTTTCACTCAGCTCTTATCGTACAACCAGGCATGCTACAC +
Preference number: 5 (lower is better)
Translates to: VVADAIWLFRVEKGY*IFHSALIVQPGMLH
Trigger: GTGTAGCATGCCTGGTTGTACGATAAGAGCTGAGTGAAAGATGCAGTATCCCTTTTCCACACGGAAAAGCCAAATAGCATCAGCAACAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS CCA 90 bp TGTACTTGTAGAGTGGTCCCGAACATGACTCCATTTTCTTCTCCATaGGCATTTGCCTCGGCCATATCTGTACCATCCAATTCAGATTCA +
Preference number: 5 (lower is better)
Translates to: CTCRVVPNMTPFSSP*AFASAISVPSNSDS
Trigger: TGAATCTGAATTGGATGGTACAGATATGGCCGAGGCAAATGCCCATGGAGAAGAAAATGGAGTCATGTTCGGGACCACTCTACAAGTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585426.5
CDS-3UTR CAA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTATCTGCTTTGCTGTCATaGGTGAGTTGGGGTGTTTTT +
Preference number: 5 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVSALLS*VSWGVF
Trigger: AAAAACACCCCAACTCACCAATGACAGCAAAGCAGA...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp GCAGTTTCTGGAAGTTTACTTGGGTTAAGAGACTGCTGTAGTACAGTGGTGGTCGACTTTCCAGGGATTTaGAAGAATGTTCCATCCCCT +
Preference number: 5 (lower is better)
Translates to: AVSGSLLGLRDCCSTVVVDFPGI*KNVPSP
Trigger: AGGGGATGGAACATTCTTCAAAATCCCTGGAAAGTC...GACCACCACTGTACTACAGCAGTCTCTTAACCCAAGTAAACTTCCAGAAACTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CAA 90 bp TGTCTTATGATTTTCATCCTGGCATTCACAGATACTAGTCTCTACCTCTTCTGCCTTCTCCATGGGCATTaGCCTCGGCCATATCTGTAC +
Preference number: 5 (lower is better)
Translates to: CLMIFILAFTDTSLYLFCLLHGH*PRPYLY
Trigger: GTACAGATATGGCCGAGGCAAATGCCCATGGAGAAG...GCAGAAGAGGTAGAGACTAGTATCTGTGAATGCCAGGATGAAAATCATAAGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CAA 90 bp GGCGAATCCGACTGCTCATCAGACACCTTTAATGGTGTCAAAACAACACGAGGAACACGAGGAACAGTCTaGTTTACCATCATTGAGACT +
Preference number: 5 (lower is better)
Translates to: GESDCSSDTFNGVKTTRGTRGTV*FTIIET
Trigger: AGTCTCAATGATGGTAAACAAGACTGTTCCTCGTGT...TCCTCGTGTTGTTTTGACACCATTAAAGGTGTCTGATGAGCAGTCGGATTCGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CAA 90 bp CCATCAGGTGACTTGGAGGGCTCTGATGACTTGGAAGTATGTGAGGTTTCTAACTTCCTTCTCAATTTCTaGCCTTATCCGCAACTGCAT +
Preference number: 5 (lower is better)
Translates to: PSGDLEGSDDLEVCEVSNFLLNF*PYPQLH
Trigger: ATGCAGTTGCGGATAAGGCAAGAAATTGAGAAGGAA...GTTAGAAACCTCACATACTTCCAAGTCATCAGAGCCCTCCAAGTCACCTGATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CAA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTCATGCTTTTTGGCTGTaGTTCTGCCAAGGCTGTCTG +
Preference number: 5 (lower is better)
Translates to: FKKIWPTSARSEARMNGCHAFWL*FCQGCL
Trigger: CAGACAGCCTTGGCAGAACAACAGCCAAAAAGCATG...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp TTTGCTGACTCAGGGTCTTATTGTGCAAATCTTCAGACGGAAATGCTTCAGGAGGGCTTTTCATGCTTTTaGGCTGTTGTTCTGCCAAGG +
Preference number: 5 (lower is better)
Translates to: FADSGSYCANLQTEMLQEGFSCF*AVVLPR
Trigger: CCTTGGCAGAACAACAGCCAAAAAGCATGAAAAGCC...CTCCTGAAGCATTTCCGTCTGAAGATTTGCACAATAAGACCCTGAGTCAGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CAA 90 bp AGCACAGAAACCAGGCTCTGGAGAAGCTGGGCTTTTCATGCTTTTTGGCTGTTGGATGTTAAAGGTAAGTaGGATACTGGTGATGCTTCA +
Preference number: 5 (lower is better)
Translates to: STETRLWRSWAFHAFWLLDVKGK*DTGDAS
Trigger: TGAAGCATCACCAGTATCCAACTTACCTTTAACATC...CAACAGCCAAAAAGCATGAAAAGCCCAGCTTCTCCAGAGCCTGGTTTCTGTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CAA 90 bp TGCATAACCACTTTAACTCATTCCTCTCATTCTCCTTACACATCTGCATTTCCGATCCCATCAGGTGACTaGGAGGGCTCTGATGACTTG +
Preference number: 5 (lower is better)
Translates to: CITTLTHSSHSPYTSAFPIPSGD*EGSDDL
Trigger: CAAGTCATCAGAGCCCTCCAAGTCACCTGATGGGAT...CGGAAATGCAGATGTGTAAGGAGAATGAGAGGAATGAGTTAAAGTGGTTATGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp GGCGAATCCGACTGCTCATCAGACACCTTTAATGGTGTCAAAACAACACGAGGAGATTCCAAAGCTGTGTaGCTCTGCAGTTTTTCTCTT +
Preference number: 5 (lower is better)
Translates to: GESDCSSDTFNGVKTTRGDSKAV*LCSFSL
Trigger: AAGAGAAAAACTGCAGAGCAACACAGCTTTGGAATC...TCCTCGTGTTGTTTTGACACCATTAAAGGTGTCTGATGAGCAGTCGGATTCGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CAA 90 bp TCTTTAGGTGGAATTTCTACCATAGGGCAAAGAGTAGCACAGAAACCAGGCTCTGAGACTGGTTGGCTCTaGATTATAAAAGGTGGCCCA +
Preference number: 5 (lower is better)
Translates to: SLGGISTIGQRVAQKPGSETGWL*IIKGGP
Trigger: TGGGCCACCTTTTATAATCAAGAGCCAACCAGTCTC...AGAGCCTGGTTTCTGTGCTACTCTTTGCCCTATGGTAGAAATTCCACCTAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CAA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTGAGATGGGCTCGAGCTaGATGCTTTGCAAAGAGCTT +
Preference number: 5 (lower is better)
Translates to: FKKIWPTSARSEARMNGCEMGSS*MLCKEL
Trigger: AAGCTCTTTGCAAAGCATCAAGCTCGAGCCCATCTC...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp TTCATCCTGGCATTCACAGATACTAGTCTCTACCTCTTCTGCAATTTCCTCCTGAAGAGACTTCTAAGTTaGGAGGCCCTTCCTTTGAGC +
Preference number: 5 (lower is better)
Translates to: FILAFTDTSLYLFCNFLLKRLLS*EALPLS
Trigger: GCTCAAAGGAAGGGCCTCCAAACTTAGAAGTCTCTT...CAGGAGGAAATTGCAGAAGAGGTAGAGACTAGTATCTGTGAATGCCAGGATGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CAA 90 bp ACGTTTCAGAGATGCAGGCATTTTCTGAAAGCTGTTCTTCAGGGTCACTCTGTAAGGTGGGCAGACTTGTaGCTAGGAGATCTACAGTTT +
Preference number: 5 (lower is better)
Translates to: TFQRCRHFLKAVLQGHSVRWADL*LGDLQF
Trigger: AAACTGTAGATCTCCTAGCAACAAGTCTGCCCACCT...TACAGAGTGACCCTGAAGAACAGCTTTCAGAAAATGCCTGCATCTCTGAAACGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CAA 90 bp GAATATCCAAGGTCCAGCAGTCAACTAAACTTTCTATATAGCTCATCCCAGAAACGGAGGTGGGCAGACTaGTTGCTAGGAGATCTACAG +
Preference number: 5 (lower is better)
Translates to: EYPRSSSQLNFLYSSSQKRRWAD*LLGDLQ
Trigger: CTGTAGATCTCCTAGCAACAAGTCTGCCCACCTCCG...TTTCTGGGATGAGCTATATAGAAAGTTTAGTTGACTGCTGGACCTTGGATATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp ATTGACAATAATGACACCAGTCGAACCTTCCATTTTTGTTTCAGGGGTAGAAGACGGAGGTGGGCAGACTaGTTGCTAGGAGATCTACAG +
Preference number: 5 (lower is better)
Translates to: IDNNDTSRTFHFCFRGRRRRWAD*LLGDLQ
Trigger: CTGTAGATCTCCTAGCAACAAGTCTGCCCACCTCCG...TCTTCTACCCCTGAAACAAAAATGGAAGGTTCGACTGGTGTCATTATTGTCAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CAA 90 bp AATATATGGAATGTAGCTCAAATACTCAACACGCAGACTTTACTGGATGCACACGTAATTCTCGGAGACTaGTGCAGGTGGCCGGCAATG +
Preference number: 5 (lower is better)
Translates to: NIWNVAQILNTQTLLDAHVILGD*CRWPAM
Trigger: CATTGCCGGCCACCTGCACAAGTCTCCGAGAATTAC...GTGTGCATCCAGTAAAGTCTGCGTGTTGAGTATTTGAGCTACATTCCATATATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACACCTCTTCCATGGGACTaGAGGTGGAAGCTTTCATGT +
Preference number: 5 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTPLPWD*RWKLSC
Trigger: ACATGAAAGCTTCCACCTCAAGTCCCATGGAAGAGG...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp TGCATAACCACTTTAACTCATTCCTCTCATTCTCCTTACACATCTGCATTTCCGGGCAATGGAAGCCTGTaGATTTCAAGCTTGGCTCCC +
Preference number: 5 (lower is better)
Translates to: CITTLTHSSHSPYTSAFPGNGSL*ISSLAP
Trigger: GGGAGCCAAGCTTGAAATCAACAGGCTTCCATTGCC...CGGAAATGCAGATGTGTAAGGAGAATGAGAGGAATGAGTTAAAGTGGTTATGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTACAGAGCTGCTGTTGTaGCTGCACCTGCATTTTCTG +
Preference number: 5 (lower is better)
Translates to: FKKIWPTSARSEARMNGCTELLL*LHLHFL
Trigger: CAGAAAATGCAGGTGCAGCAACAACAGCAGCTCTGT...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp TGCATAACCACTTTAACTCATTCCTCTCATTCTCCTTACACATCTGCATTTCCGCTGGGCTTATGGCTATaGGCTGGCCAATTGCTCTCA +
Preference number: 5 (lower is better)
Translates to: CITTLTHSSHSPYTSAFPLGLWL*AGQLLS
Trigger: TGAGAGCAATTGGCCAGCCAATAGCCATAAGCCCAG...CGGAAATGCAGATGTGTAAGGAGAATGAGAGGAATGAGTTAAAGTGGTTATGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTGATGCTACCCTAGGCTaGGCTTCAGCTTCTAAAACC +
Preference number: 5 (lower is better)
Translates to: FKKIWPTSARSEARMNGCDATLG*ASASKT
Trigger: GGTTTTAGAAGCTGAAGCCAAGCCTAGGGTAGCATC...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS TCA 90 bp TTTGGCAAATTGTTTCCGATGGAGGGAGTTGGCACAGAGGTGTACTaGGTGGAGACTAAGTTACTAGCACTGCTGCTTGATATTAGTAAC +
Preference number: 5 (lower is better)
Translates to: FGKLFPMEGVGTEVY*VETKLLALLLDISN
Trigger: GTTACTAATATCAAGCAGCAGTGCTAGTAACTTAGTCTCCACTCAGTACACCTCTGTGCCAACTCCCTCCATCGGAAACAATTTGCCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS TCA 90 bp ATTTCAACGTTTCTCTCTGGTGCTGTTTTACCCACTGAGGTAGTTTaGAGAGGCAATGGAAGCCTGTTGATTTCAAGCTTGGCTCCCAAT +
Preference number: 5 (lower is better)
Translates to: ISTFLSGAVLPTEVV*RGNGSLLISSLAPN
Trigger: ATTGGGAGCCAAGCTTGAAATCAACAGGCTTCCATTGCCTCTTCAAACTACCTCAGTGGGTAAAACAGCACCAGAGAGAAACGTTGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS CCA 90 bp AGAAAGAGGTTCCGATTTTATATTGCTACATATGCCCGTGGACTGTaGCCAACTAAGTCTCTTAGTGGTTTCCATGGTAACTGGAGGTTG +
Preference number: 5 (lower is better)
Translates to: RKRFRFYIATYARGL*PTKSLSGFHGNWRL
Trigger: CAACCTCCAGTTACCATGGAAACCACTAAGAGACTTAGTTGGCCACAGTCCACGGGCATATGTAGCAATATAAAATCGGAACCTCTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS CCA 90 bp TGCAGATGCTGCCCTTTTGAAACTCGTGCTACCAAAGTGTATTGTTaGATAATTTCCACAGAGCTGCTGTTGTTGCTGCACCTGCATTTT +
Preference number: 5 (lower is better)
Translates to: CRCCPFETRATKVYC*IISTELLLLLHLHF
Trigger: AAAATGCAGGTGCAGCAACAACAGCAGCTCTGTGGAAATTATCCAACAATACACTTTGGTAGCACGAGTTTCAAAAGGGCAGCATCTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp GAATATCCAAGGTCCAGCAGTCAACTAAACTTTCTATATAGCTCATCCCAGAAACTTCTCCATGGGCATTaGCCTCGGCCATATCTGTAC +
Preference number: 5 (lower is better)
Translates to: EYPRSSSQLNFLYSSSQKLLHGH*PRPYLY
Trigger: GTACAGATATGGCCGAGGCAAATGCCCATGGAGAAG...TTTCTGGGATGAGCTATATAGAAAGTTTAGTTGACTGCTGGACCTTGGATATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp TGTCTTTATACACCTCAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATCTTCTCCATGGGCATTaGCCTCGGCCATATCTGTAC +
Preference number: 5 (lower is better)
Translates to: CLYTPQAYAYLIGGGLGNLLHGH*PRPYLY
Trigger: GTACAGATATGGCCGAGGCAAATGCCCATGGAGAAG...ATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTGAGGTGTATAAAGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTAAAGGAAGACACTAACTaGCTTTGCACTGCTGTGTTA +
Preference number: 5 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVKEDTN*LCTAVL
Trigger: TAACACAGCAGTGCAAAGCAAGTTAGTGTCTTCCTT...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp TATGATGGGTTCGGGAGTATTAGACAGATTCTTCTGCTGGGAGGTAAGGTTCTCACACGAGGAACAGTCTaGTTTACCATCATTGAGACT +
Preference number: 5 (lower is better)
Translates to: YDGFGSIRQILLLGGKVLTRGTV*FTIIET
Trigger: AGTCTCAATGATGGTAAACAAGACTGTTCCTCGTGT...GAGAACCTTACCTCCCAGCAGAAGAATCTGTCTAATACTCCCGAACCCATCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CAA 90 bp TATGATGGGTTCGGGAGTATTAGACAGATTCTTCTGCTGGGAGGTAAGGTTCTCTTCAGGAGGTGCTATTaGGGGTTCTTCATGAGAATT +
Preference number: 5 (lower is better)
Translates to: YDGFGSIRQILLLGGKVLFRRCY*GFFMRI
Trigger: AATTCTCATGAAGAACCCCAAATAGCACCTCCTGAA...GAGAACCTTACCTCCCAGCAGAAGAATCTGTCTAATACTCCCGAACCCATCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CAA 90 bp CGGAGGTGGGCAGACTTGTTGCTAGGAGATCTACAGTTTGGATTGACAATAATGTTCAGGAGGTGCTATTaGGGGTTCTTCATGAGAATT +
Preference number: 5 (lower is better)
Translates to: RRWADLLLGDLQFGLTIMFRRCY*GFFMRI
Trigger: AATTCTCATGAAGAACCCCAAATAGCACCTCCTGAA...CATTATTGTCAATCCAAACTGTAGATCTCCTAGCAACAAGTCTGCCCACCTCCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CAA 90 bp GATGACTTGGAAGTATGTGAGGTTTCTAACCGACTCTGTGTACTCCCTTGCTTAGACCCTGTTTTTATTTaGGGGGTACTGGTCTCTACT +
Preference number: 5 (lower is better)
Translates to: DDLEVCEVSNRLCVLPCLDPVFI*GVLVST
Trigger: AGTAGAGACCAGTACCCCCAAAATAAAAACAGGGTC...TAAGCAAGGGAGTACACAGAGTCGGTTAGAAACCTCACATACTTCCAAGTCATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CAA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTCCTCAGAACAAAATGTaGTCTCAAGGGAGGCTGGAG +
Preference number: 5 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPPQNKM*SQGRLE
Trigger: CTCCAGCCTCCCTTGAGACAACATTTTGTTCTGAGG...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp TCACTCTGTAGCTCCATATCTATAGCAATTCCTTCATTTGGAAACTGGCCTTCTCCTCAGAACAAAATGTaGTCTCAAGGGAGGCTGGAG +
Preference number: 5 (lower is better)
Translates to: SLCSSISIAIPSFGNWPSPQNKM*SQGRLE
Trigger: CTCCAGCCTCCCTTGAGACAACATTTTGTTCTGAGG...AGAAGGCCAGTTTCCAAATGAAGGAATTGCTATAGATATGGAGCTACAGAGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CAA 90 bp TGCATAACCACTTTAACTCATTCCTCTCATTCTCCTTACACATCTGCATTTCCGCCTCAGAACAAAATGTaGTCTCAAGGGAGGCTGGAG +
Preference number: 5 (lower is better)
Translates to: CITTLTHSSHSPYTSAFPPQNKM*SQGRLE
Trigger: CTCCAGCCTCCCTTGAGACAACATTTTGTTCTGAGG...CGGAAATGCAGATGTGTAAGGAGAATGAGAGGAATGAGTTAAAGTGGTTATGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTGAGGGCTCTGATGACTaGGAAGTATGTGAGGTTTCT +
Preference number: 5 (lower is better)
Translates to: FKKIWPTSARSEARMNGCEGSDD*EVCEVS
Trigger: AGAAACCTCACATACTTCCAAGTCATCAGAGCCCTC...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp GCAGTTTCTGGAAGTTTACTTGGGTTAAGAGACTGCTGTAGTACAGTGGTGGTCGATTCCAAAGCTGTGTaGCTCTGCAGTTTTTCTCTT +
Preference number: 5 (lower is better)
Translates to: AVSGSLLGLRDCCSTVVVDSKAV*LCSFSL
Trigger: AAGAGAAAAACTGCAGAGCAACACAGCTTTGGAATC...GACCACCACTGTACTACAGCAGTCTCTTAACCCAAGTAAACTTCCAGAAACTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CAA 90 bp GCAGTTTCTGGAAGTTTACTTGGGTTAAGAGACTGCTGTAGTACAGTGGTGGTCATGATATGTTCCGGGTaGACTGATCATCTTCTATCC +
Preference number: 5 (lower is better)
Translates to: AVSGSLLGLRDCCSTVVVMICSG*TDHLLS
Trigger: GGATAGAAGATGATCAGTCAACCCGGAACATATCAT...GACCACCACTGTACTACAGCAGTCTCTTAACCCAAGTAAACTTCCAGAAACTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CAA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTAATGATATGTTCCGGGTaGACTGATCATCTTCTATCC +
Preference number: 5 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVMICSG*TDHLLS
Trigger: GGATAGAAGATGATCAGTCAACCCGGAACATATCAT...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACAGAGACTGGTTGGCTCTaGATTATAAAAGGTGGCCCA +
Preference number: 5 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTETGWL*IIKGGP
Trigger: TGGGCCACCTTTTATAATCAAGAGCCAACCAGTCTC...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTAAGGTTTGGAGACTGGTaGGCTCTTGATTATAAAAGG +
Preference number: 5 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVRFGDW*ALDYKR
Trigger: CCTTTTATAATCAAGAGCCAACCAGTCTCCAAACCT...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp CAGGTATGTTTTCATCAGAACTATGCACAGATAAGTCAGTGGCAGTTTCTGGAAGCCTTTGTCTGCTCTTaGATGTGTGCCAGAGTTCTC +
Preference number: 5 (lower is better)
Translates to: QVCFHQNYAQISQWQFLEAFVCS*MCARVL
Trigger: GAGAACTCTGGCACACATCAAAGAGCAGACAAAGGC...TTCCAGAAACTGCCACTGACTTATCTGTGCATAGTTCTGATGAAAACATACCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CAA 90 bp ACAATGAAGGAACTGATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCTATCATCCATGGAGCTaGATATGCTGGAGCCCTCTG +
Preference number: 5 (lower is better)
Translates to: TMKELIMSSVSHQPQLYLYHPWS*ICWSPL
Trigger: CAGAGGGCTCCAGCATATCAAGCTCCATGGATGATA...GAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTATCAGTTCCTTCATTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACACGAGGCCCTGAATTTTaGTCCAAGCTTTCAGCACTT +
Preference number: 5 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTRGPEF*SKLSAL
Trigger: AAGTGCTGAAAGCTTGGACAAAAATTCAGGGCCTCG...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTATTTCATGTTCTGTGTTaGTTGTACACTAGAGGCTCC +
Preference number: 5 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVFHVLC*LYTRGS
Trigger: GGAGCCTCTAGTGTACAACAAACACAGAACATGAAA...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp TGTCTTTATACACCTCAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATTTCTCGCTTTCTCATTaGGAGTGGTGCCAGAGTCCC +
Preference number: 5 (lower is better)
Translates to: CLYTPQAYAYLIGGGLGNFSLSH*EWCQSP
Trigger: GGGACTCTGGCACCACTCCAAATGAGAAAGCGAGAA...ATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTGAGGTGTATAAAGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp GAATATCCAAGGTCCAGCAGTCAACTAAACTTTCTATATAGCTCATCCCAGAAATTCTCGCTTTCTCATTaGGAGTGGTGCCAGAGTCCC +
Preference number: 5 (lower is better)
Translates to: EYPRSSSQLNFLYSSSQKFSLSH*EWCQSP
Trigger: GGGACTCTGGCACCACTCCAAATGAGAAAGCGAGAA...TTTCTGGGATGAGCTATATAGAAAGTTTAGTTGACTGCTGGACCTTGGATATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp GAATATCCAAGGTCCAGCAGTCAACTAAACTTTCTATATAGCTCATCCCAGAAAGGCAGCCACAGGCATTaGGTAAAACTGCTGTCTGTG +
Preference number: 5 (lower is better)
Translates to: EYPRSSSQLNFLYSSSQKGSHRH*VKLLSV
Trigger: CACAGACAGCAGTTTTACCAAATGCCTGTGGCTGCC...TTTCTGGGATGAGCTATATAGAAAGTTTAGTTGACTGCTGGACCTTGGATATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp TGCATAACCACTTTAACTCATTCCTCTCATTCTCCTTACACATCTGCATTTCCGACAGAGCTGCTGTTGTaGCTGCACCTGCATTTTCTG +
Preference number: 5 (lower is better)
Translates to: CITTLTHSSHSPYTSAFPTELLL*LHLHFL
Trigger: CAGAAAATGCAGGTGCAGCAACAACAGCAGCTCTGT...CGGAAATGCAGATGTGTAAGGAGAATGAGAGGAATGAGTTAAAGTGGTTATGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp TGCATAACCACTTTAACTCATTCCTCTCATTCTCCTTACACATCTGCATTTCCGGCAGATGCTGCCCTTTaGAAACTCGTGCTACCAAAG +
Preference number: 5 (lower is better)
Translates to: CITTLTHSSHSPYTSAFPADAAL*KLVLPK
Trigger: CTTTGGTAGCACGAGTTTCAAAAGGGCAGCATCTGC...CGGAAATGCAGATGTGTAAGGAGAATGAGAGGAATGAGTTAAAGTGGTTATGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp TGTCTTTATACACCTCAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATCTGGGCTTATGGCTATaGGCTGGCCAATTGCTCTCA +
Preference number: 5 (lower is better)
Translates to: CLYTPQAYAYLIGGGLGNLGLWL*AGQLLS
Trigger: TGAGAGCAATTGGCCAGCCAATAGCCATAAGCCCAG...ATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTGAGGTGTATAAAGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTAGGCTGGTTAAGTGCATaGCTAACTAACTTTCTCAGT +
Preference number: 5 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVGWLSA*LTNFLS
Trigger: ACTGAGAAAGTTAGTTAGCAATGCACTTAACCAGCC...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS TCA 90 bp CCAGGGAAGTCTTCAGTGTCCATTCTAAAGCCCTTGTCTGCTTCGTaGAGTTCAGATTTCACAGGAAGAGCAACATTTGTTACAAGATTC +
Preference number: 5 (lower is better)
Translates to: PGKSSVSILKPLSAS*SSDFTGRATFVTRF
Trigger: GAATCTTGTAACAAATGTTGCTCTTCCTGTGAAATCTGAACTTCACGAAGCAGACAAGGGCTTTAGAATGGACACTGAAGACTTCCCTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS GCA 90 bp GAAGTGGATTCTGATCCACTTCAACACTTCAGTGGTGGAACTAACTaGAGATGTGGTAGAAACAGCAAGAGAACTAGAATTCGAAGTGGA +
Preference number: 5 (lower is better)
Translates to: EVDSDPLQHFSGGTN*RCGRNSKRTRIRSG
Trigger: TCCACTTCGAATTCTAGTTCTCTTGCTGTTTCTACCACATCTGCAGTTAGTTCCACCACTGAAGTGTTGAAGTGGATCAGAATCCACTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647014.1
CDS-3UTR CAA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTCTTCCAATATCTGCTTaGCTGTCATTGGTGAGTTGG +
Preference number: 5 (lower is better)
Translates to: FKKIWPTSARSEARMNGCLPISA*LSLVSW
Trigger: CCAACTCACCAATGACAGCAAAGCAGATATTGGAAG...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTAATGGAGAGGTTCCACTaGTTTCTTTTAACCCTTCTT +
Preference number: 5 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVMERFH*FLLTLL
Trigger: AAGAAGGGTTAAAAGAAACAAGTGGAACCTCTCCAT...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp ACAATGAAGGAACTGATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCTCAATGTCCTCAGCTTaGGTCCATTTCAAGTGCCCT +
Preference number: 5 (lower is better)
Translates to: TMKELIMSSVSHQPQLYLSMSSA*VHFKCP
Trigger: AGGGCACTTGAAATGGACCAAAGCTGAGGACATTGA...GAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTATCAGTTCCTTCATTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp AATGCCCTCAAGTTAGTGTTGACAAGAATAGATCCTGGGGTTTCTATGTCAATGGCCCTCAAGTTAGTGTaGACAAGAATAGATCCTGGG +
Preference number: 5 (lower is better)
Translates to: NALKLVLTRIDPGVSMSMALKLV*TRIDPG
Trigger: CCCAGGATCTATTCTTGTCAACACTAACTTGAGGGC...CATTGACATAGAAACCCCAGGATCTATTCTTGTCAACACTAACTTGAGGGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593195.6
CDS-3UTR CAA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTTCGCTGTTTCCACCCTaGTGCTGCATATGCAAAGAA +
Preference number: 5 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPSLFPP*CCICKE
Trigger: TTCTTTGCATATGCAGCACAAGGGTGGAAACAGCGA...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp CAGGTATGTTTTCATCAGAACTATGCACAGATAAGTCAGTGGCAGTTTCTGGAATCGCTGTTTCCACCCTaGTGCTGCATATGCAAAGAA +
Preference number: 5 (lower is better)
Translates to: QVCFHQNYAQISQWQFLESLFPP*CCICKE
Trigger: TTCTTTGCATATGCAGCACAAGGGTGGAAACAGCGA...TTCCAGAAACTGCCACTGACTTATCTGTGCATAGTTCTGATGAAAACATACCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CAA 90 bp GAATATCCAAGGTCCAGCAGTCAACTAAACTTTCTATATAGCTCATCCCAGAAACATGCTTTTTGGCTGTaGTTCTGCCAAGGCTGTCTG +
Preference number: 5 (lower is better)
Translates to: EYPRSSSQLNFLYSSSQKHAFWL*FCQGCL
Trigger: CAGACAGCCTTGGCAGAACAACAGCCAAAAAGCATG...TTTCTGGGATGAGCTATATAGAAAGTTTAGTTGACTGCTGGACCTTGGATATTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp CAGGTATGTTTTCATCAGAACTATGCACAGATAAGTCAGTGGCAGTTTCTGGAAGGCTTTTCATGCTTTTaGGCTGTTGTTCTGCCAAGG +
Preference number: 5 (lower is better)
Translates to: QVCFHQNYAQISQWQFLEGFSCF*AVVLPR
Trigger: CCTTGGCAGAACAACAGCCAAAAAGCATGAAAAGCC...TTCCAGAAACTGCCACTGACTTATCTGTGCATAGTTCTGATGAAAACATACCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CAA 90 bp CATTTTCTTCTCCATGGGCATTTGCCTCGGCCATATCTGTACCATCCAATTCAGCAGGTGAAGTGGATATaGGAGATATTTCTGACATCA +
Preference number: 5 (lower is better)
Translates to: HFLLHGHLPRPYLYHPIQQVKWI*EIFLTS
Trigger: TGATGTCAGAAATATCTCCAATATCCACTTCACCTG...CTGAATTGGATGGTACAGATATGGCCGAGGCAAATGCCCATGGAGAAGAAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CAA 90 bp GCTAGTGGATGCTCGAGACTCAGGTTTGGAGACTGGTTGGCTCTTGATTATAAAGATGTTAAAGGTAAGTaGGATACTGGTGATGCTTCA +
Preference number: 5 (lower is better)
Translates to: ASGCSRLRFGDWLALDYKDVKGK*DTGDAS
Trigger: TGAAGCATCACCAGTATCCAACTTACCTTTAACATC...TTTATAATCAAGAGCCAACCAGTCTCCAAACCTGAGTCTCGAGCATCCACTAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CAA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTAAGCAAGTTCTGGAATaGAAGCAGGGTAGGGCTTCT +
Preference number: 5 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPKQVLE*KQGRAS
Trigger: AGAAGCCCTACCCTGCTTCAATTCCAGAACTTGCTT...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp TCCTCTGACTCCAATTCTGCCATTATATCTTTAGGTGGAATTTCTACCATAGGGGAGGGCTCTGATGACTaGGAAGTATGTGAGGTTTCT +
Preference number: 5 (lower is better)
Translates to: SSDSNSAIISLGGISTIGEGSDD*EVCEVS
Trigger: AGAAACCTCACATACTTCCAAGTCATCAGAGCCCTC...CCCTATGGTAGAAATTCCACCTAAAGATATAATGGCAGAATTGGAGTCAGAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CAA 90 bp TTCATCCTGGCATTCACAGATACTAGTCTCTACCTCTTCTGCAATTTCCTCCTGATGATATGTTCCGGGTaGACTGATCATCTTCTATCC +
Preference number: 5 (lower is better)
Translates to: FILAFTDTSLYLFCNFLLMICSG*TDHLLS
Trigger: GGATAGAAGATGATCAGTCAACCCGGAACATATCAT...CAGGAGGAAATTGCAGAAGAGGTAGAGACTAGTATCTGTGAATGCCAGGATGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CAA 90 bp TATCTTCAGGAGGTGCTATTTGGGGTTCTTCATGAGAATTGGTTAGACTTTCAGGAGACTGGTTGGCTCTaGATTATAAAAGGTGGCCCA +
Preference number: 5 (lower is better)
Translates to: YLQEVLFGVLHENWLDFQETGWL*IIKGGP
Trigger: TGGGCCACCTTTTATAATCAAGAGCCAACCAGTCTC...CTGAAAGTCTAACCAATTCTCATGAAGAACCCCAAATAGCACCTCCTGAAGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CAA 90 bp TGTCTTTATACACCTCAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATGCCTTTGTCTGCTCTTaGATGTGTGCCAGAGTTCTC +
Preference number: 5 (lower is better)
Translates to: CLYTPQAYAYLIGGGLGNAFVCS*MCARVL
Trigger: GAGAACTCTGGCACACATCAAAGAGCAGACAAAGGC...ATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTGAGGTGTATAAAGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp AATATATGGAATGTAGCTCAAATACTCAACACGCAGACTTTACTGGATGCACACGCCTTTGTCTGCTCTTaGATGTGTGCCAGAGTTCTC +
Preference number: 5 (lower is better)
Translates to: NIWNVAQILNTQTLLDAHAFVCS*MCARVL
Trigger: GAGAACTCTGGCACACATCAAAGAGCAGACAAAGGC...GTGTGCATCCAGTAAAGTCTGCGTGTTGAGTATTTGAGCTACATTCCATATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTAGGTGGGCAGACTTGTaGCTAGGAGATCTACAGTTT +
Preference number: 5 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPRWADL*LGDLQF
Trigger: AAACTGTAGATCTCCTAGCAACAAGTCTGCCCACCT...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp GAATATCCAAGGTCCAGCAGTCAACTAAACTTTCTATATAGCTCATCCCAGAAATATCATCCATGGAGCTaGATATGCTGGAGCCCTCTG +
Preference number: 5 (lower is better)
Translates to: EYPRSSSQLNFLYSSSQKYHPWS*ICWSPL
Trigger: CAGAGGGCTCCAGCATATCAAGCTCCATGGATGATA...TTTCTGGGATGAGCTATATAGAAAGTTTAGTTGACTGCTGGACCTTGGATATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp ACAATGAAGGAACTGATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCCGAGGCCCTGAATTTTaGTCCAAGCTTTCAGCACTT +
Preference number: 5 (lower is better)
Translates to: TMKELIMSSVSHQPQLYLRGPEF*SKLSAL
Trigger: AAGTGCTGAAAGCTTGGACAAAAATTCAGGGCCTCG...GAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTATCAGTTCCTTCATTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp TGTCTTTATACACCTCAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATCCTCTTCCATGGGACTaGAGGTGGAAGCTTTCATGT +
Preference number: 5 (lower is better)
Translates to: CLYTPQAYAYLIGGGLGNPLPWD*RWKLSC
Trigger: ACATGAAAGCTTCCACCTCAAGTCCCATGGAAGAGG...ATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTGAGGTGTATAAAGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACATCTTTCATGGGCATATaGGGGGATAACATGTTGGCT +
Preference number: 5 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTSFMGI*GDNMLA
Trigger: AGCCAACATGTTATCCCCCAATATGCCCATGAAAGA...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp ACAATGAAGGAACTGATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCGTACTAGTGCTTTGTTaGGCATTGTGTGTGCAGTGC +
Preference number: 5 (lower is better)
Translates to: TMKELIMSSVSHQPQLYLVLVLC*ALCVQC
Trigger: GCACTGCACACACAATGCCAAACAAAGCACTAGTAC...GAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTATCAGTTCCTTCATTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACAGGATGTACTAGTGCTTaGTTTGGCATTGTGTGTGCA +
Preference number: 5 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTGCTSA*FGIVCA
Trigger: TGCACACACAATGCCAAACAAAGCACTAGTACATCC...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp AATATATGGAATGTAGCTCAAATACTCAACACGCAGACTTTACTGGATGCACACGCAGATGCTGCCCTTTaGAAACTCGTGCTACCAAAG +
Preference number: 5 (lower is better)
Translates to: NIWNVAQILNTQTLLDAHADAAL*KLVLPK
Trigger: CTTTGGTAGCACGAGTTTCAAAAGGGCAGCATCTGC...GTGTGCATCCAGTAAAGTCTGCGTGTTGAGTATTTGAGCTACATTCCATATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTCTATTGGCTGGCCAATaGCTCTCATATTATCAGGTG +
Preference number: 5 (lower is better)
Translates to: FKKIWPTSARSEARMNGCLLAGQ*LSYYQV
Trigger: CACCTGATAATATGAGAGCAATTGGCCAGCCAATAG...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTGTTGACGCTTTAGCCTaGGGTAGTCCCTTTTATCAT +
Preference number: 5 (lower is better)
Translates to: FKKIWPTSARSEARMNGCVDALA*GSPFYH
Trigger: ATGATAAAAGGGACTACCCAAGGCTAAAGCGTCAAC...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp GAATATCCAAGGTCCAGCAGTCAACTAAACTTTCTATATAGCTCATCCCAGAAAGATGCTACCCTAGGCTaGGCTTCAGCTTCTAAAACC +
Preference number: 5 (lower is better)
Translates to: EYPRSSSQLNFLYSSSQKDATLG*ASASKT
Trigger: GGTTTTAGAAGCTGAAGCCAAGCCTAGGGTAGCATC...TTTCTGGGATGAGCTATATAGAAAGTTTAGTTGACTGCTGGACCTTGGATATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp CTGATGACTTGGAAGTATGTGAGGTTTCTAACCGACTCTGTGTACTCCCTTGCTGGTCTGAAACCAGACTaGTTTCTTTTAACCCTTCTT +
Preference number: 5 (lower is better)
Translates to: LMTWKYVRFLTDSVYSLAGLKPD*FLLTLL
Trigger: AAGAAGGGTTAAAAGAAACAAGTCTGGTTTCAGACC...AGCAAGGGAGTACACAGAGTCGGTTAGAAACCTCACATACTTCCAAGTCATCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593195.6
CDS-3UTR CAA 90 bp GCAGTTTCTGGAAGTTTACTTGGGTTAAGAGACTGCTGTAGTACAGTGGTGGTCAATCATCATGGAAAGTaGTCCCAAATCCTTCATTGG +
Preference number: 5 (lower is better)
Translates to: AVSGSLLGLRDCCSTVVVNHHGK*SQILHW
Trigger: CCAATGAAGGATTTGGGACAACTTTCCATGATGATT...GACCACCACTGTACTACAGCAGTCTCTTAACCCAAGTAAACTTCCAGAAACTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CAA 90 bp CCATCAGGTGACTTGGAGGGCTCTGATGACTTGGAAGTATGTGAGGTTTCTAACGAGAGGTTCCATTTCTaGTTTCTTTTAACCCTTCTT +
Preference number: 5 (lower is better)
Translates to: PSGDLEGSDDLEVCEVSNERFHF*FLLTLL
Trigger: AAGAAGGGTTAAAAGAAACAAGAAATGGAACCTCTC...GTTAGAAACCTCACATACTTCCAAGTCATCAGAGCCCTCCAAGTCACCTGATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592288.6
CDS-3UTR CAA 90 bp TCACTCTGTAGCTCCATATCTATAGCAATTCCTTCATTTGGAAACTGGCCTTCTAGCCATGCCGGGGTCTaGTTTCTTTTAACCCTTCTT +
Preference number: 5 (lower is better)
Translates to: SLCSSISIAIPSFGNWPSSHAGV*FLLTLL
Trigger: AAGAAGGGTTAAAAGAAACAAGACCCCGGCATGGCT...AGAAGGCCAGTTTCCAAATGAAGGAATTGCTATAGATATGGAGCTACAGAGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592541.6
CDS TCA 90 bp CACAGGAAGAGCAACATTTGTTACAAGATTCCTGGGATGAAGTTCTaGCACGTTCAAGTAGTTGGCATGTTCAGTTTTGATAGCCTTTGG +
Preference number: 5 (lower is better)
Translates to: HRKSNICYKIPGMKF*HVQVVGMFSFDSLW
Trigger: CCAAAGGCTATCAAAACTGAACATGCCAACTACTTGAACGTGTCAGAACTTCATCCCAGGAATCTTGTAACAAATGTTGCTCTTCCTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS CCA 90 bp CAGGAGTTGGTCACAATAGCAACATTAACAAGAGTATGGAAGAAGTaGATTCTGATCCACTTCAACACTTCAGTGGTGGAACTAACTGCA +
Preference number: 5 (lower is better)
Translates to: QELVTIATLTRVWKK*ILIHFNTSVVELTA
Trigger: TGCAGTTAGTTCCACCACTGAAGTGTTGAAGTGGATCAGAATCCACTTCTTCCATACTCTTGTTAATGTTGCTATTGTGACCAACTCCTG
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647014.1
CDS-3UTR CAA 90 bp GCTAGTGGATGCTCGAGACTCAGGTTTGGAGACTGGTTGGCTCTTGATTATAAATCTTGTCTTTCATGTTaGCATCTCATTGATGGTTCT +
Preference number: 5 (lower is better)
Translates to: ASGCSRLRFGDWLALDYKSCLSC*HLIDGS
Trigger: AGAACCATCAATGAGATGCAAACATGAAAGACAAGA...TTTATAATCAAGAGCCAACCAGTCTCCAAACCTGAGTCTCGAGCATCCACTAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592288.6
CDS-3UTR CAA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTATCTTGTCTTTCATGTTaGCATCTCATTGATGGTTCT +
Preference number: 5 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVSCLSC*HLIDGS
Trigger: AGAACCATCAATGAGATGCAAACATGAAAGACAAGA...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp TGCATAACCACTTTAACTCATTCCTCTCATTCTCCTTACACATCTGCATTTCCGTCTGCTTTGCTGTCATaGGTGAGTTGGGGTGTTTTT +
Preference number: 5 (lower is better)
Translates to: CITTLTHSSHSPYTSAFPSALLS*VSWGVF
Trigger: AAAAACACCCCAACTCACCAATGACAGCAAAGCAGA...CGGAAATGCAGATGTGTAAGGAGAATGAGAGGAATGAGTTAAAGTGGTTATGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp TGGATTGACAATAATGACACCAGTCGAACCTTCCATTTTTGTTTCAGGGGTAGATCTGCTTTGCTGTCATaGGTGAGTTGGGGTGTTTTT +
Preference number: 5 (lower is better)
Translates to: WIDNNDTSRTFHFCFRGRSALLS*VSWGVF
Trigger: AAAAACACCCCAACTCACCAATGACAGCAAAGCAGA...TCTACCCCTGAAACAAAAATGGAAGGTTCGACTGGTGTCATTATTGTCAATCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CAA 90 bp TGCATAACCACTTTAACTCATTCCTCTCATTCTCCTTACACATCTGCATTTCCGCTTCCAATATCTGCTTaGCTGTCATTGGTGAGTTGG +
Preference number: 5 (lower is better)
Translates to: CITTLTHSSHSPYTSAFPLPISA*LSLVSW
Trigger: CCAACTCACCAATGACAGCAAAGCAGATATTGGAAG...CGGAAATGCAGATGTGTAAGGAGAATGAGAGGAATGAGTTAAAGTGGTTATGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTGACTTTCCAGGGATTTaGAAGAATGTTCCATCCCCT +
Preference number: 5 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPDFPGI*KNVPSP
Trigger: AGGGGATGGAACATTCTTCAAAATCCCTGGAAAGTC...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp TGCATAACCACTTTAACTCATTCCTCTCATTCTCCTTACACATCTGCATTTCCGGACTTTCCAGGGATTTaGAAGAATGTTCCATCCCCT +
Preference number: 5 (lower is better)
Translates to: CITTLTHSSHSPYTSAFPDFPGI*KNVPSP
Trigger: AGGGGATGGAACATTCTTCAAAATCCCTGGAAAGTC...CGGAAATGCAGATGTGTAAGGAGAATGAGAGGAATGAGTTAAAGTGGTTATGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTACACGAGGAACAGTCTaGTTTACCATCATTGAGACT +
Preference number: 5 (lower is better)
Translates to: FKKIWPTSARSEARMNGCTRGTV*FTIIET
Trigger: AGTCTCAATGATGGTAAACAAGACTGTTCCTCGTGT...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp GAATATCCAAGGTCCAGCAGTCAACTAAACTTTCTATATAGCTCATCCCAGAAAGCCCTCAAGTTAGTGTaGACAAGAATAGATCCTGGG +
Preference number: 5 (lower is better)
Translates to: EYPRSSSQLNFLYSSSQKALKLV*TRIDPG
Trigger: CCCAGGATCTATTCTTGTCAACACTAACTTGAGGGC...TTTCTGGGATGAGCTATATAGAAAGTTTAGTTGACTGCTGGACCTTGGATATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp TGTCTTTATACACCTCAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATTCGCTGTTTCCACCCTaGTGCTGCATATGCAAAGAA +
Preference number: 5 (lower is better)
Translates to: CLYTPQAYAYLIGGGLGNSLFPP*CCICKE
Trigger: TTCTTTGCATATGCAGCACAAGGGTGGAAACAGCGA...ATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTGAGGTGTATAAAGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACATTCCTTCTCAATTTCTaGCCTTATCCGCAACTGCAT +
Preference number: 5 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTFLLNF*PYPQLH
Trigger: ATGCAGTTGCGGATAAGGCAAGAAATTGAGAAGGAA...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp AATATATGGAATGTAGCTCAAATACTCAACACGCAGACTTTACTGGATGCACACGGCTTTTCATGCTTTTaGGCTGTTGTTCTGCCAAGG +
Preference number: 5 (lower is better)
Translates to: NIWNVAQILNTQTLLDAHGFSCF*AVVLPR
Trigger: CCTTGGCAGAACAACAGCCAAAAAGCATGAAAAGCC...GTGTGCATCCAGTAAAGTCTGCGTGTTGAGTATTTGAGCTACATTCCATATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp TGTCTTATGATTTTCATCCTGGCATTCACAGATACTAGTCTCTACCTCTTCTGCGACCCTGTTTTTATTTaGGGGGTACTGGTCTCTACT +
Preference number: 5 (lower is better)
Translates to: CLMIFILAFTDTSLYLFCDPVFI*GVLVST
Trigger: AGTAGAGACCAGTACCCCCAAAATAAAAACAGGGTC...GCAGAAGAGGTAGAGACTAGTATCTGTGAATGCCAGGATGAAAATCATAAGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CAA 90 bp ACTTCCCATCTGCCTATCCACTTCTGGGAGCAAAAGCAGGAGGTATTGTTGAAAACTCTGTGTACTCCCTaGCTTATGTGTTTTATTTCT +
Preference number: 5 (lower is better)
Translates to: TSHLPIHFWEQKQEVLLKTLCTP*LMCFIS
Trigger: AGAAATAAAACACATAAGCAAGGGAGTACACAGAGT...TTTCAACAATACCTCCTGCTTTTGCTCCCAGAAGTGGATAGGCAGATGGGAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000593195.6
CDS-3UTR CAA 90 bp ATTGACAATAATGACACCAGTCGAACCTTCCATTTTTGTTTCAGGGGTAGAAGAGAGGGCTCTGATGACTaGGAAGTATGTGAGGTTTCT +
Preference number: 5 (lower is better)
Translates to: IDNNDTSRTFHFCFRGRREGSDD*EVCEVS
Trigger: AGAAACCTCACATACTTCCAAGTCATCAGAGCCCTC...TCTTCTACCCCTGAAACAAAAATGGAAGGTTCGACTGGTGTCATTATTGTCAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CAA 90 bp GAATATCCAAGGTCCAGCAGTCAACTAAACTTTCTATATAGCTCATCCCAGAAAGAGGGCTCTGATGACTaGGAAGTATGTGAGGTTTCT +
Preference number: 5 (lower is better)
Translates to: EYPRSSSQLNFLYSSSQKEGSDD*EVCEVS
Trigger: AGAAACCTCACATACTTCCAAGTCATCAGAGCCCTC...TTTCTGGGATGAGCTATATAGAAAGTTTAGTTGACTGCTGGACCTTGGATATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp CTATTTGGGGTTCTTCATGAGAATTGGTTAGACTTTCAGCCTCCTCAGAAAATTGAGACTGGTTGGCTCTaGATTATAAAAGGTGGCCCA +
Preference number: 5 (lower is better)
Translates to: LFGVLHENWLDFQPPQKIETGWL*IIKGGP
Trigger: TGGGCCACCTTTTATAATCAAGAGCCAACCAGTCTC...AATTTTCTGAGGAGGCTGAAAGTCTAACCAATTCTCATGAAGAACCCCAAATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CAA 90 bp GAATATCCAAGGTCCAGCAGTCAACTAAACTTTCTATATAGCTCATCCCAGAAAGAGACTGGTTGGCTCTaGATTATAAAAGGTGGCCCA +
Preference number: 5 (lower is better)
Translates to: EYPRSSSQLNFLYSSSQKETGWL*IIKGGP
Trigger: TGGGCCACCTTTTATAATCAAGAGCCAACCAGTCTC...TTTCTGGGATGAGCTATATAGAAAGTTTAGTTGACTGCTGGACCTTGGATATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp AACAAAATGTTGTCTCAAGGGAGGCTGGAGTACATGATTCTTCTGATGTGGACTAGGTTTGGAGACTGGTaGGCTCTTGATTATAAAAGG +
Preference number: 5 (lower is better)
Translates to: NKMLSQGRLEYMILLMWTRFGDW*ALDYKR
Trigger: CCTTTTATAATCAAGAGCCAACCAGTCTCCAAACCT...AGTCCACATCAGAAGAATCATGTACTCCAGCCTCCCTTGAGACAACATTTTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CAA 90 bp GAATATCCAAGGTCCAGCAGTCAACTAAACTTTCTATATAGCTCATCCCAGAAAAAGAGACTTCTAAGTTaGGAGGCCCTTCCTTTGAGC +
Preference number: 5 (lower is better)
Translates to: EYPRSSSQLNFLYSSSQKKRLLS*EALPLS
Trigger: GCTCAAAGGAAGGGCCTCCAAACTTAGAAGTCTCTT...TTTCTGGGATGAGCTATATAGAAAGTTTAGTTGACTGCTGGACCTTGGATATTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp AATATATGGAATGTAGCTCAAATACTCAACACGCAGACTTTACTGGATGCACACAAGAGACTTCTAAGTTaGGAGGCCCTTCCTTTGAGC +
Preference number: 5 (lower is better)
Translates to: NIWNVAQILNTQTLLDAHKRLLS*EALPLS
Trigger: GCTCAAAGGAAGGGCCTCCAAACTTAGAAGTCTCTT...GTGTGCATCCAGTAAAGTCTGCGTGTTGAGTATTTGAGCTACATTCCATATATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp GAATATCCAAGGTCCAGCAGTCAACTAAACTTTCTATATAGCTCATCCCAGAAAGAGAGGTTTGGCAAATaGTTTCCGATGGAGGGAGTT +
Preference number: 5 (lower is better)
Translates to: EYPRSSSQLNFLYSSSQKERFGK*FPMEGV
Trigger: AACTCCCTCCATCGGAAACAATTTGCCAAACCTCTC...TTTCTGGGATGAGCTATATAGAAAGTTTAGTTGACTGCTGGACCTTGGATATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTTCTTTCATGGGCATATaGGGGGATAACATGTTGGCT +
Preference number: 5 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPSFMGI*GDNMLA
Trigger: AGCCAACATGTTATCCCCCAATATGCCCATGAAAGA...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp TGTCTTTATACACCTCAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATGTACTAGTGCTTTGTTaGGCATTGTGTGTGCAGTGC +
Preference number: 5 (lower is better)
Translates to: CLYTPQAYAYLIGGGLGNVLVLC*ALCVQC
Trigger: GCACTGCACACACAATGCCAAACAAAGCACTAGTAC...ATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTGAGGTGTATAAAGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp ACAATGAAGGAACTGATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCGGTTCCGATTTTATATaGCTACATATGCCCGTGGAC +
Preference number: 5 (lower is better)
Translates to: TMKELIMSSVSHQPQLYLGSDFI*LHMPVD
Trigger: GTCCACGGGCATATGTAGCAATATAAAATCGGAACC...GAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTATCAGTTCCTTCATTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp AATATATGGAATGTAGCTCAAATACTCAACACGCAGACTTTACTGGATGCACACTCCAATTCATCTGCATaGCTGCTGTCGGCAAAGTTC +
Preference number: 5 (lower is better)
Translates to: NIWNVAQILNTQTLLDAHSNSSA*LLSAKF
Trigger: GAACTTTGCCGACAGCAGCAATGCAGATGAATTGGA...GTGTGCATCCAGTAAAGTCTGCGTGTTGAGTATTTGAGCTACATTCCATATATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp TGTCTTTATACACCTCAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATTCCAATTCATCTGCATaGCTGCTGTCGGCAAAGTTC +
Preference number: 5 (lower is better)
Translates to: CLYTPQAYAYLIGGGLGNSNSSA*LLSAKF
Trigger: GAACTTTGCCGACAGCAGCAATGCAGATGAATTGGA...ATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTGAGGTGTATAAAGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp GCAGTGAAGAGAAAACTAAGGATCCACTGGAACTTATGCTGCTTTCCTCGGGTATGTACCAGCTTGTTTTaGTGTATTTTGAACCGAGTA +
Preference number: 5 (lower is better)
Translates to: AVKRKLRIHWNLCCFPRVCTSLF*CILNRV
Trigger: TACTCGGTTCAAAATACACAAAAACAAGCTGGTACA...TACCCGAGGAAAGCAGCATAAGTTCCAGTGGATCCTTAGTTTTCTCTTCACTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp CAGGTATGTTTTCATCAGAACTATGCACAGATAAGTCAGTGGCAGTTTCTGGAAGTCCCAAATCCTTCATaGGAGGAAGATCCTTCATAC +
Preference number: 5 (lower is better)
Translates to: QVCFHQNYAQISQWQFLEVPNPS*EEDPSY
Trigger: GTATGAAGGATCTTCCTCCAATGAAGGATTTGGGAC...TTCCAGAAACTGCCACTGACTTATCTGTGCATAGTTCTGATGAAAACATACCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
CDS GCA 90 bp GACAGAGGATTTATCAACAGAACTCACAAAGGGATGTTCTTTAATTaGTCCCGATATAGCAGTGCTGCAAACAGATACAGGGACAGAATT +
Preference number: 5 (lower is better)
Translates to: DRGFINRTHKGMFFN*SRYSSAANRYRDRI
Trigger: AATTCTGTCCCTGTATCTGTTTGCAGCACTGCTATATCGGGAGCAATTAAAGAACATCCCTTTGTGAGTTCTGTTGATAAATCCTCTGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS GCA 90 bp CATTCTGGTCATAGGAAACTTGTTTCATGCCCAGTTCACAGCTGCTaGTTAAACCTTCCTCAAAAGAAAGAGGTTCCGATTTTATATTGC +
Preference number: 5 (lower is better)
Translates to: HSGHRKLVSCPVHSC*LNLPQKKEVPILYC
Trigger: GCAATATAAAATCGGAACCTCTTTCTTTTGAGGAAGGTTTAAGCAGCAGCTGTGAACTGGGCATGAAACAAGTTTCCTATGACCAGAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp TGCATAACCACTTTAACTCATTCCTCTCATTCTCCTTACACATCTGCATTTCCGCATGTTTGCATCTCATaGATGGTTCTGATGATGACG +
Preference number: 5 (lower is better)
Translates to: CITTLTHSSHSPYTSAFPHVCIS*MVLMMT
Trigger: CGTCATCATCAGAACCATCAATGAGATGCAAACATG...CGGAAATGCAGATGTGTAAGGAGAATGAGAGGAATGAGTTAAAGTGGTTATGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp ACAGATACTAGTCTCTACCTCTTCTGCAATTTCCTCCTGAATTACAGATTCTTCTCTGCTTTGCTGTCATaGGTGAGTTGGGGTGTTTTT +
Preference number: 5 (lower is better)
Translates to: TDTSLYLFCNFLLNYRFFSALLS*VSWGVF
Trigger: AAAAACACCCCAACTCACCAATGACAGCAAAGCAGA...GAAGAATCTGTAATTCAGGAGGAAATTGCAGAAGAGGTAGAGACTAGTATCTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CAA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTTTCAGGAGGTGCTATTaGGGGTTCTTCATGAGAATT +
Preference number: 5 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPFRRCY*GFFMRI
Trigger: AATTCTCATGAAGAACCCCAAATAGCACCTCCTGAA...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp TGTCTTTATACACCTCAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATGACCCTGTTTTTATTTaGGGGGTACTGGTCTCTACT +
Preference number: 5 (lower is better)
Translates to: CLYTPQAYAYLIGGGLGNDPVFI*GVLVST
Trigger: AGTAGAGACCAGTACCCCCAAAATAAAAACAGGGTC...ATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTGAGGTGTATAAAGACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp ATATCCTCTGACTCCAATTCTGCCATTATATCTTTAGGTGGAATTTCTACCATACCTCAGAACAAAATGTaGTCTCAAGGGAGGCTGGAG +
Preference number: 5 (lower is better)
Translates to: ISSDSNSAIISLGGISTIPQNKM*SQGRLE
Trigger: CTCCAGCCTCCCTTGAGACAACATTTTGTTCTGAGG...TATGGTAGAAATTCCACCTAAAGATATAATGGCAGAATTGGAGTCAGAGGATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CAA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACAGATGTTAAAGGTAAGTaGGATACTGGTGATGCTTCA +
Preference number: 5 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTDVKGK*DTGDAS
Trigger: TGAAGCATCACCAGTATCCAACTTACCTTTAACATC...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp TGCATAACCACTTTAACTCATTCCTCTCATTCTCCTTACACATCTGCATTTCCGATGATATGTTCCGGGTaGACTGATCATCTTCTATCC +
Preference number: 5 (lower is better)
Translates to: CITTLTHSSHSPYTSAFPMICSG*TDHLLS
Trigger: GGATAGAAGATGATCAGTCAACCCGGAACATATCAT...CGGAAATGCAGATGTGTAAGGAGAATGAGAGGAATGAGTTAAAGTGGTTATGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp AACATCATTCATCATAACACAGGATTCCAAGTTATCTTCAGGAGGTGCTATTTGAAGAGACTTCTAAGTTaGGAGGCCCTTCCTTTGAGC +
Preference number: 5 (lower is better)
Translates to: NIIHHNTGFQVIFRRCYLKRLLS*EALPLS
Trigger: GCTCAAAGGAAGGGCCTCCAAACTTAGAAGTCTCTT...CAAATAGCACCTCCTGAAGATAACTTGGAATCCTGTGTTATGATGAATGATGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CAA 90 bp AACATCATTCATCATAACACAGGATTCCAAGTTATCTTCAGGAGGTGCTATTTGAGGTGGGCAGACTTGTaGCTAGGAGATCTACAGTTT +
Preference number: 5 (lower is better)
Translates to: NIIHHNTGFQVIFRRCYLRWADL*LGDLQF
Trigger: AAACTGTAGATCTCCTAGCAACAAGTCTGCCCACCT...CAAATAGCACCTCCTGAAGATAACTTGGAATCCTGTGTTATGATGAATGATGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CAA 90 bp TGCATAACCACTTTAACTCATTCCTCTCATTCTCCTTACACATCTGCATTTCCGTTCTGCATGGAGTGCTaGTTTAGCCATTCTTGCTTA +
Preference number: 5 (lower is better)
Translates to: CITTLTHSSHSPYTSAFPFCMEC*FSHSCL
Trigger: TAAGCAAGAATGGCTAAACAAGCACTCCATGCAGAA...CGGAAATGCAGATGTGTAAGGAGAATGAGAGGAATGAGTTAAAGTGGTTATGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp AATATATGGAATGTAGCTCAAATACTCAACACGCAGACTTTACTGGATGCACACGGATGTACTAGTGCTTaGTTTGGCATTGTGTGTGCA +
Preference number: 5 (lower is better)
Translates to: NIWNVAQILNTQTLLDAHGCTSA*FGIVCA
Trigger: TGCACACACAATGCCAAACAAAGCACTAGTACATCC...GTGTGCATCCAGTAAAGTCTGCGTGTTGAGTATTTGAGCTACATTCCATATATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp AATATATGGAATGTAGCTCAAATACTCAACACGCAGACTTTACTGGATGCACACCATGGTAACTGGAGGTaGTTTTTGATCAGATGGGAC +
Preference number: 5 (lower is better)
Translates to: NIWNVAQILNTQTLLDAHHGNWR*FLIRWD
Trigger: GTCCCATCTGATCAAAAACAACCTCCAGTTACCATG...GTGTGCATCCAGTAAAGTCTGCGTGTTGAGTATTTGAGCTACATTCCATATATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp TGTCTTTATACACCTCAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATCATGGTAACTGGAGGTaGTTTTTGATCAGATGGGAC +
Preference number: 5 (lower is better)
Translates to: CLYTPQAYAYLIGGGLGNHGNWR*FLIRWD
Trigger: GTCCCATCTGATCAAAAACAACCTCCAGTTACCATG...ATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTGAGGTGTATAAAGACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp AATATATGGAATGTAGCTCAAATACTCAACACGCAGACTTTACTGGATGCACACCTGGTCATAGGAAACTaGTTTCATGCCCAGTTCACA +
Preference number: 5 (lower is better)
Translates to: NIWNVAQILNTQTLLDAHLVIGN*FHAQFT
Trigger: TGTGAACTGGGCATGAAACAAGTTTCCTATGACCAG...GTGTGCATCCAGTAAAGTCTGCGTGTTGAGTATTTGAGCTACATTCCATATATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp ACAATGAAGGAACTGATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCATGCTACACAAAGTTTaGAAGGACCTATGCAGTCGT +
Preference number: 5 (lower is better)
Translates to: TMKELIMSSVSHQPQLYLMLHKV*KDLCSR
Trigger: ACGACTGCATAGGTCCTTCAAAACTTTGTGTAGCAT...GAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTATCAGTTCCTTCATTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTAAATGGGGCATTGACTaGTATACACATGGACAGATA +
Preference number: 5 (lower is better)
Translates to: FKKIWPTSARSEARMNGCKWGID*YTHGQI
Trigger: TATCTGTCCATGTGTATACAAGTCAATGCCCCATTT...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACAAAATGGGGCATTGACTaGTATACACATGGACAGATA +
Preference number: 5 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTKWGID*YTHGQI
Trigger: TATCTGTCCATGTGTATACAAGTCAATGCCCCATTT...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTAACAAAAATGGGGCATaGACTTGTATACACATGGAC +
Preference number: 5 (lower is better)
Translates to: FKKIWPTSARSEARMNGCNKNGA*TCIHMD
Trigger: GTCCATGTGTATACAAGTCAATGCCCCATTTTTGTT...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTTCCCATGTGAAAATATaGGTCATTCTTACCCTGGAT +
Preference number: 5 (lower is better)
Translates to: FKKIWPTSARSEARMNGCSHVKI*VILTLD
Trigger: ATCCAGGGTAAGAATGACCAATATTTTCACATGGGA...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp GAATATCCAAGGTCCAGCAGTCAACTAAACTTTCTATATAGCTCATCCCAGAAAGCCCCCAATCTGTGTTaGTCATGCATGTTATGTTTG +
Preference number: 5 (lower is better)
Translates to: EYPRSSSQLNFLYSSSQKAPNLC*SCMLCL
Trigger: CAAACATAACATGCATGACAAACACAGATTGGGGGC...TTTCTGGGATGAGCTATATAGAAAGTTTAGTTGACTGCTGGACCTTGGATATTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS CCA 90 bp GAAGTTCAGATTTCACAGGAAGAGCAACATTTGTTACAAGATTCCTaGGATGAAGTTCTGACACGTTCAAGTAGTTGGCATGTTCAGTTT +
Preference number: 5 (lower is better)
Translates to: EVQISQEEQHLLQDS*DEVLTRSSSWHVQF
Trigger: AAACTGAACATGCCAACTACTTGAACGTGTCAGAACTTCATCCCAGGAATCTTGTAACAAATGTTGCTCTTCCTGTGAAATCTGAACTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp AATATATGGAATGTAGCTCAAATACTCAACACGCAGACTTTACTGGATGCACACCATGTTTGCATCTCATaGATGGTTCTGATGATGACG +
Preference number: 5 (lower is better)
Translates to: NIWNVAQILNTQTLLDAHHVCIS*MVLMMT
Trigger: CGTCATCATCAGAACCATCAATGAGATGCAAACATG...GTGTGCATCCAGTAAAGTCTGCGTGTTGAGTATTTGAGCTACATTCCATATATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp GAATATCCAAGGTCCAGCAGTCAACTAAACTTTCTATATAGCTCATCCCAGAAAAAGGAAGACACTAACTaGCTTTGCACTGCTGTGTTA +
Preference number: 5 (lower is better)
Translates to: EYPRSSSQLNFLYSSSQKKEDTN*LCTAVL
Trigger: TAACACAGCAGTGCAAAGCAAGTTAGTGTCTTCCTT...TTTCTGGGATGAGCTATATAGAAAGTTTAGTTGACTGCTGGACCTTGGATATTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp ACAGATACTAGTCTCTACCTCTTCTGCAATTTCCTCCTGAATTACAGATTCTTCAAGGAAGACACTAACTaGCTTTGCACTGCTGTGTTA +
Preference number: 5 (lower is better)
Translates to: TDTSLYLFCNFLLNYRFFKEDTN*LCTAVL
Trigger: TAACACAGCAGTGCAAAGCAAGTTAGTGTCTTCCTT...GAAGAATCTGTAATTCAGGAGGAAATTGCAGAAGAGGTAGAGACTAGTATCTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CAA 90 bp ACCTTTAATGGTGTCAAAACAACACGAGGAACAGTCTTGTTTACCATCATTGAGAAGGAAGACACTAACTaGCTTTGCACTGCTGTGTTA +
Preference number: 5 (lower is better)
Translates to: TFNGVKTTRGTVLFTIIEKEDTN*LCTAVL
Trigger: TAACACAGCAGTGCAAAGCAAGTTAGTGTCTTCCTT...CTCAATGATGGTAAACAAGACTGTTCCTCGTGTTGTTTTGACACCATTAAAGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CAA 90 bp CTATTTGGGGTTCTTCATGAGAATTGGTTAGACTTTCAGCCTCCTCAGAAAATTAAGGAAGACACTAACTaGCTTTGCACTGCTGTGTTA +
Preference number: 5 (lower is better)
Translates to: LFGVLHENWLDFQPPQKIKEDTN*LCTAVL
Trigger: TAACACAGCAGTGCAAAGCAAGTTAGTGTCTTCCTT...AATTTTCTGAGGAGGCTGAAAGTCTAACCAATTCTCATGAAGAACCCCAAATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CAA 90 bp ATATCCTCTGACTCCAATTCTGCCATTATATCTTTAGGTGGAATTTCTACCATATCGCTGTTTCCACCCTaGTGCTGCATATGCAAAGAA +
Preference number: 5 (lower is better)
Translates to: ISSDSNSAIISLGGISTISLFPP*CCICKE
Trigger: TTCTTTGCATATGCAGCACAAGGGTGGAAACAGCGA...TATGGTAGAAATTCCACCTAAAGATATAATGGCAGAATTGGAGTCAGAGGATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CAA 90 bp AATATATGGAATGTAGCTCAAATACTCAACACGCAGACTTTACTGGATGCACACTTCCTTCTCAATTTCTaGCCTTATCCGCAACTGCAT +
Preference number: 5 (lower is better)
Translates to: NIWNVAQILNTQTLLDAHFLLNF*PYPQLH
Trigger: ATGCAGTTGCGGATAAGGCAAGAAATTGAGAAGGAA...GTGTGCATCCAGTAAAGTCTGCGTGTTGAGTATTTGAGCTACATTCCATATATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp AATATATGGAATGTAGCTCAAATACTCAACACGCAGACTTTACTGGATGCACACTTCAGGAGGTGCTATTaGGGGTTCTTCATGAGAATT +
Preference number: 5 (lower is better)
Translates to: NIWNVAQILNTQTLLDAHFRRCY*GFFMRI
Trigger: AATTCTCATGAAGAACCCCAAATAGCACCTCCTGAA...GTGTGCATCCAGTAAAGTCTGCGTGTTGAGTATTTGAGCTACATTCCATATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTCAGGTGAAGTGGATATaGGAGATATTTCTGACATCA +
Preference number: 5 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPQVKWI*EIFLTS
Trigger: TGATGTCAGAAATATCTCCAATATCCACTTCACCTG...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp ACAATGAAGGAACTGATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCGATGTTAAAGGTAAGTaGGATACTGGTGATGCTTCA +
Preference number: 5 (lower is better)
Translates to: TMKELIMSSVSHQPQLYLDVKGK*DTGDAS
Trigger: TGAAGCATCACCAGTATCCAACTTACCTTTAACATC...GAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTATCAGTTCCTTCATTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp TTTAAAAAGATATGGCCAACCTCTGCAAGGTCTGAAGCCAGAATGAATGGGTGTACTCTGTGTACTCCCTaGCTTATGTGTTTTATTTCT +
Preference number: 5 (lower is better)
Translates to: FKKIWPTSARSEARMNGCTLCTP*LMCFIS
Trigger: AGAAATAAAACACATAAGCAAGGGAGTACACAGAGT...ACACCCATTCATTCTGGCTTCAGACCTTGCAGAGGTTGGCCATATCTTTTTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp CTATTTGGGGTTCTTCATGAGAATTGGTTAGACTTTCAGCCTCCTCAGAAAATTGATTCCAAAGCTGTGTaGCTCTGCAGTTTTTCTCTT +
Preference number: 5 (lower is better)
Translates to: LFGVLHENWLDFQPPQKIDSKAV*LCSFSL
Trigger: AAGAGAAAAACTGCAGAGCAACACAGCTTTGGAATC...AATTTTCTGAGGAGGCTGAAAGTCTAACCAATTCTCATGAAGAACCCCAAATAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CAA 90 bp AATATATGGAATGTAGCTCAAATACTCAACACGCAGACTTTACTGGATGCACACGATTCCAAAGCTGTGTaGCTCTGCAGTTTTTCTCTT +
Preference number: 5 (lower is better)
Translates to: NIWNVAQILNTQTLLDAHDSKAV*LCSFSL
Trigger: AAGAGAAAAACTGCAGAGCAACACAGCTTTGGAATC...GTGTGCATCCAGTAAAGTCTGCGTGTTGAGTATTTGAGCTACATTCCATATATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp ATATCCTCTGACTCCAATTCTGCCATTATATCTTTAGGTGGAATTTCTACCATAAGGTGGGCAGACTTGTaGCTAGGAGATCTACAGTTT +
Preference number: 5 (lower is better)
Translates to: ISSDSNSAIISLGGISTIRWADL*LGDLQF
Trigger: AAACTGTAGATCTCCTAGCAACAAGTCTGCCCACCT...TATGGTAGAAATTCCACCTAAAGATATAATGGCAGAATTGGAGTCAGAGGATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CAA 90 bp AATATATGGAATGTAGCTCAAATACTCAACACGCAGACTTTACTGGATGCACACTCAGAAGGAAATCTGTaGTTAATTCCCATTGGGGGA +
Preference number: 5 (lower is better)
Translates to: NIWNVAQILNTQTLLDAHSEGNL*LIPIGG
Trigger: TCCCCCAATGGGAATTAACAACAGATTTCCTTCTGA...GTGTGCATCCAGTAAAGTCTGCGTGTTGAGTATTTGAGCTACATTCCATATATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp GAATATCCAAGGTCCAGCAGTCAACTAAACTTTCTATATAGCTCATCCCAGAAAAGCAAATCCGGTTACTaGGGTTATACTGATTGCTAC +
Preference number: 5 (lower is better)
Translates to: EYPRSSSQLNFLYSSSQKSKSGY*GYTDCY
Trigger: GTAGCAATCAGTATAACCCAAGTAACCGGATTTGCT...TTTCTGGGATGAGCTATATAGAAAGTTTAGTTGACTGCTGGACCTTGGATATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp AATATATGGAATGTAGCTCAAATACTCAACACGCAGACTTTACTGGATGCACACTTGGCATGTTCAGTTTaGATAGCCTTTGGACAGCTT +
Preference number: 5 (lower is better)
Translates to: NIWNVAQILNTQTLLDAHLACSV*IAFGQL
Trigger: AAGCTGTCCAAAGGCTATCAAAACTGAACATGCCAA...GTGTGCATCCAGTAAAGTCTGCGTGTTGAGTATTTGAGCTACATTCCATATATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp TGTCTTTATACACCTCAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATTTGGCATGTTCAGTTTaGATAGCCTTTGGACAGCTT +
Preference number: 5 (lower is better)
Translates to: CLYTPQAYAYLIGGGLGNLACSV*IAFGQL
Trigger: AAGCTGTCCAAAGGCTATCAAAACTGAACATGCCAA...ATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTGAGGTGTATAAAGACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp TGTCTTTATACACCTCAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATTTTCATGTTCTGTGTTaGTTGTACACTAGAGGCTCC +
Preference number: 5 (lower is better)
Translates to: CLYTPQAYAYLIGGGLGNFHVLC*LYTRGS
Trigger: GGAGCCTCTAGTGTACAACAAACACAGAACATGAAA...ATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTGAGGTGTATAAAGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp CAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATAGCAGTTTTCTTCCTTGGTTCACATTTAACTaGAGTGTGTTCTCCTACAGT +
Preference number: 5 (lower is better)
Translates to: QAYAYLIGGGLGNSSFLPWFTFN*SVFSYS
Trigger: ACTGTAGGAGAACACACTCAAGTTAAATGTGAACCA...AGGAAGAAAACTGCTATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp GAATATCCAAGGTCCAGCAGTCAACTAAACTTTCTATATAGCTCATCCCAGAAATTCTGCATGGAGTGCTaGTTTAGCCATTCTTGCTTA +
Preference number: 5 (lower is better)
Translates to: EYPRSSSQLNFLYSSSQKFCMEC*FSHSCL
Trigger: TAAGCAAGAATGGCTAAACAAGCACTCCATGCAGAA...TTTCTGGGATGAGCTATATAGAAAGTTTAGTTGACTGCTGGACCTTGGATATTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACATACCAAAGTGTATTGTaGGATAATTTCCACAGAGCT +
Preference number: 5 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTYQSVL*DNFHRA
Trigger: AGCTCTGTGGAAATTATCCAACAATACACTTTGGTA...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp TGTCTTTATACACCTCAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATATGCTACACAAAGTTTaGAAGGACCTATGCAGTCGT +
Preference number: 5 (lower is better)
Translates to: CLYTPQAYAYLIGGGLGNMLHKV*KDLCSR
Trigger: ACGACTGCATAGGTCCTTCAAAACTTTGTGTAGCAT...ATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTGAGGTGTATAAAGACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp AATATATGGAATGTAGCTCAAATACTCAACACGCAGACTTTACTGGATGCACACGGGCATGGTTGGTTTTaGTTTTCTTTCATCTTCCCT +
Preference number: 5 (lower is better)
Translates to: NIWNVAQILNTQTLLDAHGHGWF*FSFIFP
Trigger: AGGGAAGATGAAAGAAAACAAAAACCAACCATGCCC...GTGTGCATCCAGTAAAGTCTGCGTGTTGAGTATTTGAGCTACATTCCATATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp GAATATCCAAGGTCCAGCAGTCAACTAAACTTTCTATATAGCTCATCCCAGAAAGGCTGGTTAAGTGCATaGCTAACTAACTTTCTCAGT +
Preference number: 5 (lower is better)
Translates to: EYPRSSSQLNFLYSSSQKGWLSA*LTNFLS
Trigger: ACTGAGAAAGTTAGTTAGCAATGCACTTAACCAGCC...TTTCTGGGATGAGCTATATAGAAAGTTTAGTTGACTGCTGGACCTTGGATATTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp CTGTGTCCAGTAATCAGGATAATGCACATGCTAACATTTGCACACTACACCACATGTACCAGCTTGTTTTaGTGTATTTTGAACCGAGTA +
Preference number: 5 (lower is better)
Translates to: LCPVIRIMHMLTFAHYTTCTSLF*CILNRV
Trigger: TACTCGGTTCAAAATACACAAAAACAAGCTGGTACA...TGTGGTGTAGTGTGCAAATGTTAGCATGTGCATTATCCTGATTACTGGACACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp TGTCTTTATACACCTCAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATACCCAAGTTGTTACTTaGAGAAAGGGAAAGACAGAG +
Preference number: 5 (lower is better)
Translates to: CLYTPQAYAYLIGGGLGNTQVVT*RKGKTE
Trigger: CTCTGTCTTTCCCTTTCTCAAAGTAACAACTTGGGT...ATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTGAGGTGTATAAAGACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp GAATATCCAAGGTCCAGCAGTCAACTAAACTTTCTATATAGCTCATCCCAGAAAACCCAAGTTGTTACTTaGAGAAAGGGAAAGACAGAG +
Preference number: 5 (lower is better)
Translates to: EYPRSSSQLNFLYSSSQKTQVVT*RKGKTE
Trigger: CTCTGTCTTTCCCTTTCTCAAAGTAACAACTTGGGT...TTTCTGGGATGAGCTATATAGAAAGTTTAGTTGACTGCTGGACCTTGGATATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS GCA 90 bp TTTCATTCTGGTCATAGGAAACTTGTTTCATGCCCAGTTCACAGCTaGTGCTTAAACCTTCCTCAAAAGAAAGAGGTTCCGATTTTATAT +
Preference number: 5 (lower is better)
Translates to: FHSGHRKLVSCPVHS*CLNLPQKKEVPILY
Trigger: ATATAAAATCGGAACCTCTTTCTTTTGAGGAAGGTTTAAGCAGCAGCTGTGAACTGGGCATGAAACAAGTTTCCTATGACCAGAATGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp TGTCTTTATACACCTCAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATATGGAGAGGTTCCACTaGTTTCTTTTAACCCTTCTT +
Preference number: 5 (lower is better)
Translates to: CLYTPQAYAYLIGGGLGNMERFH*FLLTLL
Trigger: AAGAAGGGTTAAAAGAAACAAGTGGAACCTCTCCAT...ATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTGAGGTGTATAAAGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp AATATATGGAATGTAGCTCAAATACTCAACACGCAGACTTTACTGGATGCACACCAGGTGAAGTGGATATaGGAGATATTTCTGACATCA +
Preference number: 5 (lower is better)
Translates to: NIWNVAQILNTQTLLDAHQVKWI*EIFLTS
Trigger: TGATGTCAGAAATATCTCCAATATCCACTTCACCTG...GTGTGCATCCAGTAAAGTCTGCGTGTTGAGTATTTGAGCTACATTCCATATATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp ACAATGAAGGAACTGATAATGAGCTCAGTATCTCATCAGCCTCAATTGTACCTCGATGTTAATGGTAAGTaGGACATAAGAGATGCTTCT +
Preference number: 5 (lower is better)
Translates to: TMKELIMSSVSHQPQLYLDVNGK*DIRDAS
Trigger: AGAAGCATCTCTTATGTCCAACTTACCATTAACATC...GAGGTACAATTGAGGCTGATGAGATACTGAGCTCATTATCAGTTCCTTCATTGT
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp TCCTCTGACTCCAATTCTGCCATTATATCTTTAGGTGGAATTTCTACCATAGGGACTCTGTGTACTCCCTaGCTTATGTGTTTTATTTCT +
Preference number: 5 (lower is better)
Translates to: SSDSNSAIISLGGISTIGTLCTP*LMCFIS
Trigger: AGAAATAAAACACATAAGCAAGGGAGTACACAGAGT...CCCTATGGTAGAAATTCCACCTAAAGATATAATGGCAGAATTGGAGTCAGAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CAA 90 bp GCTCATCAGACACCTTTAATGGTGTCAAAACAACACGAGGAACAGTCTTGTTTAACTCTGTGTACTCCCTaGCTTATGTGTTTTATTTCT +
Preference number: 5 (lower is better)
Translates to: AHQTPLMVSKQHEEQSCLTLCTP*LMCFIS
Trigger: AGAAATAAAACACATAAGCAAGGGAGTACACAGAGT...TAAACAAGACTGTTCCTCGTGTTGTTTTGACACCATTAAAGGTGTCTGATGAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CAA 90 bp GAATATCCAAGGTCCAGCAGTCAACTAAACTTTCTATATAGCTCATCCCAGAAATGGTTCACATTTAACTaGAGTGTGTTCTCCTACAGT +
Preference number: 5 (lower is better)
Translates to: EYPRSSSQLNFLYSSSQKWFTFN*SVFSYS
Trigger: ACTGTAGGAGAACACACTCAAGTTAAATGTGAACCA...TTTCTGGGATGAGCTATATAGAAAGTTTAGTTGACTGCTGGACCTTGGATATTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp AATATATGGAATGTAGCTCAAATACTCAACACGCAGACTTTACTGGATGCACACAACAAAAATGGGGCATaGACTTGTATACACATGGAC +
Preference number: 5 (lower is better)
Translates to: NIWNVAQILNTQTLLDAHNKNGA*TCIHMD
Trigger: GTCCATGTGTATACAAGTCAATGCCCCATTTTTGTT...GTGTGCATCCAGTAAAGTCTGCGTGTTGAGTATTTGAGCTACATTCCATATATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp AATATATGGAATGTAGCTCAAATACTCAACACGCAGACTTTACTGGATGCACACTCCCATGTGAAAATATaGGTCATTCTTACCCTGGAT +
Preference number: 5 (lower is better)
Translates to: NIWNVAQILNTQTLLDAHSHVKI*VILTLD
Trigger: ATCCAGGGTAAGAATGACCAATATTTTCACATGGGA...GTGTGCATCCAGTAAAGTCTGCGTGTTGAGTATTTGAGCTACATTCCATATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp AATATATGGAATGTAGCTCAAATACTCAACACGCAGACTTTACTGGATGCACACTCTTGTCTTTCATGTTaGCATCTCATTGATGGTTCT +
Preference number: 5 (lower is better)
Translates to: NIWNVAQILNTQTLLDAHSCLSC*HLIDGS
Trigger: AGAACCATCAATGAGATGCAAACATGAAAGACAAGA...GTGTGCATCCAGTAAAGTCTGCGTGTTGAGTATTTGAGCTACATTCCATATATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp AGGTATTGTCTTATGATTTTCATCCTGGCATTCACAGATACTAGTCTCTACCTCGATGTTAATGGTAAGTaGGACATAAGAGATGCTTCT +
Preference number: 5 (lower is better)
Translates to: RYCLMIFILAFTDTSLYLDVNGK*DIRDAS
Trigger: AGAAGCATCTCTTATGTCCAACTTACCATTAACATC...GAGGTAGAGACTAGTATCTGTGAATGCCAGGATGAAAATCATAAGACAATACCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
CDS-3UTR CAA 90 bp TGTCTTTATACACCTCAGGCATATGCATATCTTATAGGAGGAGGATTAGGGAATGATGTTAATGGTAAGTaGGACATAAGAGATGCTTCT +
Preference number: 5 (lower is better)
Translates to: CLYTPQAYAYLIGGGLGNDVNGK*DIRDAS
Trigger: AGAAGCATCTCTTATGTCCAACTTACCATTAACATC...ATTCCCTAATCCTCCTCCTATAAGATATGCATATGCCTGAGGTGTATAAAGACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS-3UTR CAA 90 bp GAATATCCAAGGTCCAGCAGTCAACTAAACTTTCTATATAGCTCATCCCAGAAAGCATTATTCTATTTGTaGTTGCTGATGCTATTTGGC +
Preference number: 5 (lower is better)
Translates to: EYPRSSSQLNFLYSSSQKALFYL*LLMLFG
Trigger: GCCAAATAGCATCAGCAACAACAAATAGAATAATGC...TTTCTGGGATGAGCTATATAGAAAGTTTAGTTGACTGCTGGACCTTGGATATTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS CCA 90 bp TCTTTGATAATAGACCTTCCACTTCATCATAATATAACTAGTGGCTaGTATCAAATGTCTAAAACTTCTACTTACCTGCCTATCCACTTC +
Preference number: 5 (lower is better)
Translates to: SLIIDLPLHHNITSG*YQMSKTSTYLPIHF
Trigger: GAAGTGGATAGGCAGGTAAGTAGAAGTTTTAGACATTTGATACCAGCCACTAGTTATATTATGATGAAGTGGAAGGTCTATTATCAAAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590189.6
CDS TCA 72 bp TTCCACGGGGTGCTCGGGGTTCGGGCGCGGAGACAATaGCCCAGTGACCCGGTGACCCGCACTCGCTCCGCG +
Preference number: 6 (lower is better)
Translates to: FHGVLGVRARRQ*PSDPVTRTRSA
Trigger: CGCGGAGCGAGTGCGGGTCACCGGGTCACTGGGTCATTGTCTCCGCGCCCGAACCCCGAGCACCCCGTGGAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS GCA 72 bp CAAAGGTCTCCGGAGCGGCAGAGAGGGAAGTCGAGCTaGGCCGAGCGCTCGGAAATTCACCCGTGGAGAAGG +
Preference number: 6 (lower is better)
Translates to: QRSPERQRGKSS*AERSEIHPWRR
Trigger: CCTTCTCCACGGGTGAATTTCCGAGCGCTCGGCGCAGCTCGACTTCCCTCTCTGCCGCTCCGGAGACCTTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592349.5
ENST00000642541.1
CDS GCA 72 bp CACAGACACCTGAGGACACGCCACGGGCTGTACGGATaGCTCTGTCCTCACTGGTCTGCCCTGCAGGTCCAA +
Preference number: 6 (lower is better)
Translates to: HRHLRTRHGLYG*LCPHWSALQVQ
Trigger: TTGGACCTGCAGGGCAGACCAGTGAGGACAGAGGCATCCGTACAGCCCGTGGCGTGTCCTCAGGTGTCTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS CCA 72 bp AAGTCGAGCTGCGCCGAGCGCTCGGAAATTCACCCGTaGAGAAGGCACAGCAGAGCCCCGAGAGCGAAGTAC +
Preference number: 6 (lower is better)
Translates to: KSSCAERSEIHP*RRHSRAPRAKY
Trigger: GTACTTCGCTCTCGGGGCTCTGCTGTGCCTTCTCCACGGGTGAATTTCCGAGCGCTCGGCGCAGCTCGACTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592349.5
ENST00000642541.1
CDS CAA 72 bp GGGGGAGGCGGTGGCGGCGGCGGATGTACTAGTGCTTaGTTTGGCATTGTGTGTGCAGTGCCTCCCACCTCA +
Preference number: 6 (lower is better)
Translates to: GGGGGGGGCTSA*FGIVCAVPPTS
Trigger: TGAGGTGGGAGGCACTGCACACACAATGCCAAACAAAGCACTAGTACATCCGCCGCCGCCACCGCCTCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS TCA 72 bp TTGGCAACTGGCTCAGGCCTGCTAATCACAGACACCTaGGGACACGCCACGGGCTGTACGGATGCCTCTGTC +
Preference number: 6 (lower is better)
Translates to: LATGSGLLITDT*GHATGCTDASV
Trigger: GACAGAGGCATCCGTACAGCCCGTGGCGTGTCCTCAGGTGTCTGTGATTAGCAGGCCTGAGCCAGTTGCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS GCA 72 bp CCACGGGCTGTACGGATGCCTCTGTCCTCACTGGTCTaGCCTGCAGGTCCAAGCTGGCTTCTGAGCTTTCAA +
Preference number: 6 (lower is better)
Translates to: PRAVRMPLSSLV*PAGPSWLLSFQ
Trigger: TTGAAAGCTCAGAAGCCAGCTTGGACCTGCAGGGCAGACCAGTGAGGACAGAGGCATCCGTACAGCCCGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS CAA 72 bp GAGGCGGTGGCGGCGGCGGATGTACTAGTGCTTTGTTaGGCATTGTGTGTGCAGTGCCTCCCACCTCATCAC +
Preference number: 6 (lower is better)
Translates to: EAVAAADVLVLC*ALCVQCLPPHH
Trigger: GTGATGAGGTGGGAGGCACTGCACACACAATGCCAAACAAAGCACTAGTACATCCGCCGCCGCCACCGCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS CAA 90 bp GGGGAGGCGGTGGCGGCGGCGGATGTACTAGTGCTTTGTTTGGCATaGTGTGTGCAGTGCCTCCCACCTCATCACCTTCTTTCATGGGCA +
Preference number: 6 (lower is better)
Translates to: GEAVAAADVLVLCLA*CVQCLPPHHLLSWA
Trigger: TGCCCATGAAAGAAGGTGATGAGGTGGGAGGCACTGCACACACAATGCCAAACAAAGCACTAGTACATCCGCCGCCGCCACCGCCTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS GCA 72 bp GTCTGTGACCGCTACAGAATCACTGCAGCTGAGGGCTaGTCTCACAGTGGTACCCATGGATACAGTGGCCTG +
Preference number: 6 (lower is better)
Translates to: VCDRYRITAAEG*SHSGTHGYSGL
Trigger: CAGGCCACTGTATCCATGGGTACCACTGTGAGAGCAGCCCTCAGCTGCAGTGATTCTGTAGCGGTCACAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS TCA 72 bp CCTCACTGGTCTGCCCTGCAGGTCCAAGCTGGCTTCTaGGCTTTCAACGGAGACAGTCAGAGACAAACTGGA +
Preference number: 6 (lower is better)
Translates to: PHWSALQVQAGF*AFNGDSQRQTG
Trigger: TCCAGTTTGTCTCTGACTGTCTCCGTTGAAAGCTCAGAAGCCAGCTTGGACCTGCAGGGCAGACCAGTGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS TCA 72 bp TTTCTAGTGCTGTGGAGGATTCCCTGTTTCTCTTCCTaGGTACAGGCCCCTCAGCACACCTGGGCAGCTCCT +
Preference number: 6 (lower is better)
Translates to: FLVLWRIPCFSS*VQAPQHTWAAP
Trigger: AGGAGCTGCCCAGGTGTGCTGAGGGGCCTGTACTCAGGAAGAGAAACAGGGAATCCTCCACAGCACTAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000585426.5
ENST00000586327.6
ENST00000586948.1
ENST00000588038.5
ENST00000642541.1
CDS GCA 72 bp GTTTTTCTAGTGCCAGGCGGGCAGCCTCGGCCCAGGTaGGGTCCTTCTTCTTCCTCTTGTCTTTCATGTTTG +
Preference number: 6 (lower is better)
Translates to: VFLVPGGQPRPR*GPSSSSCLSCL
Trigger: CAAACATGAAAGACAAGAGGAAGAAGAAGGACCGCACCTGGGCCGAGGCTGCCCGCCTGGCACTAGAAAAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269197.12
ENST00000592288.6
ENST00000592541.6
ENST00000681521.1
CDS CCA 72 bp GAACGGGCATCTGAGCGTTCTGACCAGACAAGCCTGTaGCAGGATTGGAGCCACTTCCCAAAATCCCAATGG +
Preference number: 6 (lower is better)
Translates to: ERASERSDQTSL*QDWSHFPKSQW
Trigger: CCATTGGGATTTTGGGAAGTGGCTCCAATCCTGCCACAGGCTTGTCTGGTCAGAACGCTCAGATGCCCGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS CAA 72 bp GTGGCGGCGGCGGATGTACTAGTGCTTTGTTTGGCATaGTGTGTGCAGTGCCTCCCACCTCATCACCTTCTT +
Preference number: 6 (lower is better)
Translates to: VAAADVLVLCLA*CVQCLPPHHLL
Trigger: AAGAAGGTGATGAGGTGGGAGGCACTGCACACACAATGCCAAACAAAGCACTAGTACATCCGCCGCCGCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS TCA 72 bp CGTGGTGCTGTGGTCAACGATGACTTTACACGGAATTaGTCGGTTTATGGCTGCTGGTGCAAAGCCCCCTGG +
Preference number: 6 (lower is better)
Translates to: RGAVVNDDFTRN*SVYGCWCKAPW
Trigger: CCAGGGGGCTTTGCACCAGCAGCCATAAACCGATCAATTCCGTGTAAAGTCATCGTTGACCACAGCACCACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS TCA 72 bp GGAAGCTACACGAGGGGAGCAGCCGCTTTTGCTGTTTaGCCTCAGGGCTGTGAACAATTCTGTTCTGCATGG +
Preference number: 6 (lower is better)
Translates to: GSYTRGAAAFAV*PQGCEQFCSAW
Trigger: CCATGCAGAACAGAATTGTTCACAGCCCTGAGGTCAAACAGCAAAAGCGGCTGCTCCCCTCGTGTAGCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS TCA 72 bp CCAGCGTCAGTGTGGAAGCCGCCATTCTTGTCAACATaGAATAGGTTCTGCTGGAAGCTACACGAGGGGAGC +
Preference number: 6 (lower is better)
Translates to: PASVWKPPFLST*NRFCWKLHEGS
Trigger: GCTCCCCTCGTGTAGCTTCCAGCAGAACCTATTTCATGTTGACAAGAATGGCGGCTTCCACACTGACGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS TCA 72 bp GGCAGCCACAGGCATTTGGTAAAACTGCTGTCTGTGTaGGGTACCAGCGTCAGTGTGGAAGCCGCCATTCTT +
Preference number: 6 (lower is better)
Translates to: GSHRHLVKLLSV*GTSVSVEAAIL
Trigger: AAGAATGGCGGCTTCCACACTGACGCTGGTACCTCACACAGACAGCAGTTTTACCAAATGCCTGTGGCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS GCA 72 bp TGTGTCTGCTTCACTTTTGAAAGGAGCTGGGCCACGTaGCTGCTCAGCAAAGTTATGACTGGGAGCAGTCGG +
Preference number: 6 (lower is better)
Translates to: CVCFTFERSWAT*LLSKVMTGSSR
Trigger: CCGACTGCTCCCAGTCATAACTTTGCTGAGCAGGCACGTGGCCCAGCTCCTTTCAAAAGTGAAGCAGACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS CAA 90 bp TTGGCTCCCAATCTGGGCTGTGGCAACACTTTTTCCAAAGGCAGGTaGCCCTGTAGTAACTGCGTCACCAGCGGATTGTTAGCCTCCACA +
Preference number: 6 (lower is better)
Translates to: LAPNLGCGNTFSKGR*PCSNCVTSGLLAST
Trigger: TGTGGAGGCTAACAATCCGCTGGTGACGCAGTTACTACAGGGCAACCTGCCTTTGGAAAAAGTGTTGCCACAGCCCAGATTGGGAGCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS CAA 90 bp GGAGTGGTGCCAGAGTCCCTGCCAAGTAGCCCTTACCATCTGGATTaGGAGAGCTGGGCGGAATTTCAACGTTTCTCTCTGGTGCTGTTT +
Preference number: 6 (lower is better)
Translates to: GVVPESLPSSPYHLD*ESWAEFQRFSLVLF
Trigger: AAACAGCACCAGAGAGAAACGTTGAAATTCCGCCCAGCTCTCCAAATCCAGATGGTAAGGGCTACTTGGCAGGGACTCTGGCACCACTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS TCA 72 bp TTTATGGCTGCTGGTGCAAAGCCCCCTGGTGGTTGCTaGGGTTTTCCAGAATTATCTGCCCTGTTTCGAGGC +
Preference number: 6 (lower is better)
Translates to: FMAAGAKPPGGC*GFPELSALFRG
Trigger: GCCTCGAAACAGGGCAGATAATTCTGGAAAACCTCAGCAACCACCAGGGGGCTTTGCACCAGCAGCCATAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS TCA 72 bp AGCCATTCTTGCTTAAATGGCTGGCTGTGTCCTAGCTaGCTGATGCCGGAACTGATGACACAAGGCACCCCT +
Preference number: 6 (lower is better)
Translates to: SHSCLNGWLCPS*LMPELMTQGTP
Trigger: AGGGGTGCCTTGTGTCATCAGTTCCGGCATCAGTCAGCTAGGACACAGCCAGCCATTTAAGCAAGAATGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS GCA 72 bp AGATCCTTCATACACACCAACGCTGTCTCCAAGCCATaGCGGGGTCAGAAACGGACACTGCCAACCTTAATC +
Preference number: 6 (lower is better)
Translates to: RSFIHTNAVSKP*RGQKRTLPTLI
Trigger: GATTAAGGTTGGCAGTGTCCGTTTCTGACCCCGGCATGGCTTGGAGACAGCGTTGGTGTGTATGAAGGATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585426.5
CDS CCA 72 bp TGGTGCCAGAGTCCCTGCCAAGTAGCCCTTACCATCTaGATTTGGAGAGCTGGGCGGAATTTCAACGTTTCT +
Preference number: 6 (lower is better)
Translates to: WCQSPCQVALTI*IWRAGRNFNVS
Trigger: AGAAACGTTGAAATTCCGCCCAGCTCTCCAAATCCAGATGGTAAGGGCTACTTGGCAGGGACTCTGGCACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS CAA 90 bp GGTGCGGTCCTTCTTCTTCCTCTTGTCTTTCATGTTTGCATCTCATaGATGGTTCTGATGATGACGTGGGGGATTCCACGGGGTGCTCGG +
Preference number: 6 (lower is better)
Translates to: GAVLLLPLVFHVCIS*MVLMMTWGIPRGAR
Trigger: CCGAGCACCCCGTGGAATCCCCCACGTCATCATCAGAACCATCAATGAGATGCAAACATGAAAGACAAGAGGAAGAAGAAGGACCGCACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS CAA 90 bp CCTCGGCCCAGGTGCGGTCCTTCTTCTTCCTCTTGTCTTTCATGTTaGCATCTCATTGATGGTTCTGATGATGACGTGGGGGATTCCACG +
Preference number: 6 (lower is better)
Translates to: PRPRCGPSSSSCLSC*HLIDGSDDDVGDST
Trigger: CGTGGAATCCCCCACGTCATCATCAGAACCATCAATGAGATGCAAACATGAAAGACAAGAGGAAGAAGAAGGACCGCACCTGGGCCGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS CAA 90 bp GAGGAAAGACTAACCTCTCCCAATCCCTTCTGTTCAAGATGCCTGTaGAAGGCAAATGCATTACACCCCACTGGGGTCTTGGAAGAGGCC +
Preference number: 6 (lower is better)
Translates to: EERLTSPNPFCSRCL*KANALHPTGVLEEA
Trigger: GGCCTCTTCCAAGACCCCAGTGGGGTGTAATGCATTTGCCTTCAACAGGCATCTTGAACAGAAGGGATTGGGAGAGGTTAGTCTTTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS GCA 72 bp TTCTCGCTTTCTCATTTGGAGTGGTGCCAGAGTCCCTaGCAAGTAGCCCTTACCATCTGGATTTGGAGAGCT +
Preference number: 6 (lower is better)
Translates to: FSLSHLEWCQSP*QVALTIWIWRA
Trigger: AGCTCTCCAAATCCAGATGGTAAGGGCTACTTGGCAGGGACTCTGGCACCACTCCAAATGAGAAAGCGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS GCA 72 bp CAATCCCTTCTGTTCAAGATGCCTGTTGAAGGCAAATaGATTACACCCCACTGGGGTCTTGGAAGAGGCCTG +
Preference number: 6 (lower is better)
Translates to: QSLLFKMPVEGK*ITPHWGLGRGL
Trigger: CAGGCCTCTTCCAAGACCCCAGTGGGGTGTAATGCATTTGCCTTCAACAGGCATCTTGAACAGAAGGGATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS GCA 72 bp GCCGGCAAGAGCATTTCAGTTCCAATTCATCTGCATTaGTGCTGTCGGCAAAGTTCTGAACGGGCATCTGAG +
Preference number: 6 (lower is better)
Translates to: AGKSISVPIHLH*CCRQSSERASE
Trigger: CTCAGATGCCCGTTCAGAACTTTGCCGACAGCAGCAATGCAGATGAATTGGAACTGAAATGCTCTTGCCGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS CAA 72 bp ATGACTTCCAATATCTGCTTTGCTGTCATTGGTGAGTaGGGGTGTTTTTCTAGTGCCAGGCGGGCAGCCTCG +
Preference number: 6 (lower is better)
Translates to: MTSNICFAVIGE*GCFSSARRAAS
Trigger: CGAGGCTGCCCGCCTGGCACTAGAAAAACACCCCAACTCACCAATGACAGCAAAGCAGATATTGGAAGTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000269197.12
ENST00000590189.6
ENST00000592288.6
ENST00000592541.6
ENST00000593195.6
ENST00000681521.1
CDS CAA 72 bp CTGTTGAAGGCAAATGCATTACACCCCACTGGGGTCTaGGAAGAGGCCTGTAACAGAGCTGCAGTAGGAATG +
Preference number: 6 (lower is better)
Translates to: LLKANALHPTGV*EEACNRAAVGM
Trigger: CATTCCTACTGCAGCTCTGTTACAGGCCTCTTCCAAGACCCCAGTGGGGTGTAATGCATTTGCCTTCAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS TCA 72 bp TGTTTTGCTGCCGAAGCAGCAATGAAAGTGGAACTGTaGTCTATACCTTCGTTGGCAACTGGCTCAGGCCTG +
Preference number: 6 (lower is better)
Translates to: CFAAEAAMKVEL*SIPSLATGSGL
Trigger: CAGGCCTGAGCCAGTTGCCAACGAAGGTATAGATCACAGTTCCACTTTCATTGCTGCTTCGGCAGCAAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS TCA 72 bp AAAGGAGCTGGGCCACGTGCCTGCTCAGCAAAGTTATaGCTGGGAGCAGTCGGCTCATTTAATTTATCTGGA +
Preference number: 6 (lower is better)
Translates to: KGAGPRACSAKL*LGAVGSFNLSG
Trigger: TCCAGATAAATTAAATGAGCCGACTGCTCCCAGTCATAACTTTGCTGAGCAGGCACGTGGCCCAGCTCCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS GCA 72 bp GGCAAGAGCATTTCAGTTCCAATTCATCTGCATTGCTaGTGTCGGCAAAGTTCTGAACGGGCATCTGAGCGT +
Preference number: 6 (lower is better)
Translates to: GKSISVPIHLHC*CRQSSERASER
Trigger: ACGCTCAGATGCCCGTTCAGAACTTTGCCGACAGCAGCAATGCAGATGAATTGGAACTGAAATGCTCTTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS CCA 72 bp CATTGGGGGAATCAAGACAGAGCTAGTGGAGAGGTTTaGCAAATTGTTTCCGATGGAGGGAGTTGGCACAGA +
Preference number: 6 (lower is better)
Translates to: HWGNQDRASGEV*QIVSDGGSWHR
Trigger: TCTGTGCCAACTCCCTCCATCGGAAACAATTTGCCAAACCTCTCCACTAGCTCTGTCTTGATTCCCCCAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS CCA 72 bp GAAAGTGGAACTGTGATCTATACCTTCGTTGGCAACTaGCTCAGGCCTGCTAATCACAGACACCTGAGGACA +
Preference number: 6 (lower is better)
Translates to: ESGTVIYTFVGN*LRPANHRHLRT
Trigger: TGTCCTCAGGTGTCTGTGATTAGCAGGCCTGAGCCAGTTGCCAACGAAGGTATAGATCACAGTTCCACTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS CCA 72 bp GAGCTGGGCCACGTGCCTGCTCAGCAAAGTTATGACTaGGAGCAGTCGGCTCATTTAATTTATCTGGAACAA +
Preference number: 6 (lower is better)
Translates to: ELGHVPAQQSYD*EQSAHLIYLEQ
Trigger: TTGTTCCAGATAAATTAAATGAGCCGACTGCTCCCAGTCATAACTTTGCTGAGCAGGCACGTGGCCCAGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS CCA 72 bp CTGCCAAGTAGCCCTTACCATCTGGATTTGGAGAGCTaGGCGGAATTTCAACGTTTCTCTCTGGTGCTGTTT +
Preference number: 6 (lower is better)
Translates to: LPSSPYHLDLES*AEFQRFSLVLF
Trigger: AAACAGCACCAGAGAGAAACGTTGAAATTCCGCCCAGCTCTCCAAATCCAGATGGTAAGGGCTACTTGGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS CCA 72 bp TGCCTCCCACCTCATCACCTTCTTTCATGGGCATATTaGGGGATAACATGTTGGCTAACCTTAGCTGGTGAG +
Preference number: 6 (lower is better)
Translates to: CLPPHHLLSWAY*GITCWLTLAGE
Trigger: CTCACCAGCTAAGGTTAGCCAACATGTTATCCCCCAATATGCCCATGAAAGAAGGTGATGAGGTGGGAGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS CCA 72 bp TGGGAACCATGGCTTCTTGAAGAAAGGGTTCATTCCTaGACTGCCTATCCACTTCTGGGAGCAAAAGCAGGA +
Preference number: 6 (lower is better)
Translates to: WEPWLLEERVHS*TAYPLLGAKAG
Trigger: TCCTGCTTTTGCTCCCAGAAGTGGATAGGCAGTCCAGGAATGAACCCTTTCTTCAAGAAGCCATGGTTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592288.6
CDS CAA 72 bp GGAATCAAGACAGAGCTAGTGGAGAGGTTTGGCAAATaGTTTCCGATGGAGGGAGTTGGCACAGAGGTGTAC +
Preference number: 6 (lower is better)
Translates to: GIKTELVERFGK*FPMEGVGTEVY
Trigger: GTACACCTCTGTGCCAACTCCCTCCATCGGAAACAATTTGCCAAACCTCTCCACTAGCTCTGTCTTGATTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS CAA 72 bp AATCTGGGCTGTGGCAACACTTTTTCCAAAGGCAGGTaGCCCTGTAGTAACTGCGTCACCAGCGGATTGTTA +
Preference number: 6 (lower is better)
Translates to: NLGCGNTFSKGR*PCSNCVTSGLL
Trigger: TAACAATCCGCTGGTGACGCAGTTACTACAGGGCAACCTGCCTTTGGAAAAAGTGTTGCCACAGCCCAGATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS CAA 72 bp CTAACCTCTCCCAATCCCTTCTGTTCAAGATGCCTGTaGAAGGCAAATGCATTACACCCCACTGGGGTCTTG +
Preference number: 6 (lower is better)
Translates to: LTSPNPFCSRCL*KANALHPTGVL
Trigger: CAAGACCCCAGTGGGGTGTAATGCATTTGCCTTCAACAGGCATCTTGAACAGAAGGGATTGGGAGAGGTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS TCA 72 bp TTGTTTCCGATGGAGGGAGTTGGCACAGAGGTGTACTaGGTGGAGACTAAGTTACTAGCACTGCTGCTTGAT +
Preference number: 6 (lower is better)
Translates to: LFPMEGVGTEVY*VETKLLALLLD
Trigger: ATCAAGCAGCAGTGCTAGTAACTTAGTCTCCACTCAGTACACCTCTGTGCCAACTCCCTCCATCGGAAACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS TCA 72 bp ATATTGGGGGATAACATGTTGGCTAACCTTAGCTGGTaGGGTGCTGAGGAAAGACTAACCTCTCCCAATCCC +
Preference number: 6 (lower is better)
Translates to: ILGDNMLANLSW*GAEERLTSPNP
Trigger: GGGATTGGGAGAGGTTAGTCTTTCCTCAGCACCTCACCAGCTAAGGTTAGCCAACATGTTATCCCCCAATAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS GCA 72 bp GGTGCGGTCCTTCTTCTTCCTCTTGTCTTTCATGTTTaGATCTCATTGATGGTTCTGATGATGACGTGGGGG +
Preference number: 6 (lower is better)
Translates to: GAVLLLPLVFHV*ISLMVLMMTWG
Trigger: CCCCCACGTCATCATCAGAACCATCAATGAGATGCAAACATGAAAGACAAGAGGAAGAAGAAGGACCGCACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS GCA 72 bp GAAAGACTAACCTCTCCCAATCCCTTCTGTTCAAGATaGCTGTTGAAGGCAAATGCATTACACCCCACTGGG +
Preference number: 6 (lower is better)
Translates to: ERLTSPNPFCSR*LLKANALHPTG
Trigger: CCCAGTGGGGTGTAATGCATTTGCCTTCAACAGGCATCTTGAACAGAAGGGATTGGGAGAGGTTAGTCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS GCA 72 bp TTTCAGCCGGCAAGAGCATTTCAGTTCCAATTCATCTaGATTGCTGCTGTCGGCAAAGTTCTGAACGGGCAT +
Preference number: 6 (lower is better)
Translates to: FQPARAFQFQFI*IAAVGKVLNGH
Trigger: ATGCCCGTTCAGAACTTTGCCGACAGCAGCAATGCAGATGAATTGGAACTGAAATGCTCTTGCCGGCTGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS GCA 72 bp AGATCCTTCATACACACCAACGCTGTCTCCAAGCCATaGCGGGGTCTGAAACCAGACTTGTTTCTTTTAACC +
Preference number: 6 (lower is better)
Translates to: RSFIHTNAVSKP*RGLKPDLFLLT
Trigger: GGTTAAAAGAAACAAGTCTGGTTTCAGACCCCGGCATGGCTTGGAGACAGCGTTGGTGTGTATGAAGGATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000590973.2
ENST00000592349.5
ENST00000593195.6
ENST00000593235.1
ENST00000642541.1
CDS CCA 72 bp ACAGTCAGAGACAAACTGGAGGTCAGCGTGGTGCTGTaGTCAACGATGACTTTACACGGAATTGATCGGTTT +
Preference number: 6 (lower is better)
Translates to: TVRDKLEVSVVL*STMTLHGIDRF
Trigger: AAACCGATCAATTCCGTGTAAAGTCATCGTTGACCACAGCACCACGCTGACCTCCAGTTTGTCTCTGACTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS CCA 72 bp CACCTTCTTTCATGGGCATATTGGGGGATAACATGTTaGCTAACCTTAGCTGGTGAGGTGCTGAGGAAAGAC +
Preference number: 6 (lower is better)
Translates to: HLLSWAYWGITC*LTLAGEVLRKD
Trigger: GTCTTTCCTCAGCACCTCACCAGCTAAGGTTAGCCAACATGTTATCCCCCAATATGCCCATGAAAGAAGGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS CCA 72 bp TGTGTGCAGTGCCTCCCACCTCATCACCTTCTTTCATaGGCATATTGGGGGATAACATGTTGGCTAACCTTA +
Preference number: 6 (lower is better)
Translates to: CVQCLPPHHLLS*AYWGITCWLTL
Trigger: TAAGGTTAGCCAACATGTTATCCCCCAATATGCCCATGAAAGAAGGTGATGAGGTGGGAGGCACTGCACACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS CCA 72 bp AGAGTGGTCCCGAACATGACTCCATTTTCTTCTCCATaGGCATTTGCCTCGGCCATATCTGTACCATCCAAT +
Preference number: 6 (lower is better)
Translates to: RVVPNMTPFSSP*AFASAISVPSN
Trigger: ATTGGATGGTACAGATATGGCCGAGGCAAATGCCCATGGAGAAGAAAATGGAGTCATGTTCGGGACCACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585426.5
CDS CAA 72 bp ATAGATCCTGGGGTTTCTATGTCAATGTCCTCAGCTTaGGTCCATTTCAAGTGCCCTGAAGGCGAATCCGAC +
Preference number: 6 (lower is better)
Translates to: IDPGVSMSMSSA*VHFKCPEGESD
Trigger: GTCGGATTCGCCTTCAGGGCACTTGAAATGGACCAAAGCTGAGGACATTGACATAGAAACCCCAGGATCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590189.6
ENST00000681521.1
CDS CAA 90 bp CTGTGGCCAACTAAGTCTCTTAGTGGTTTCCATGGTAACTGGAGGTaGTTTTTGATCAGATGGGACTTCTGCATTAGGGAGAGGTGGAGG +
Preference number: 6 (lower is better)
Translates to: LWPTKSLSGFHGNWR*FLIRWDFCIRERWR
Trigger: CCTCCACCTCTCCCTAATGCAGAAGTCCCATCTGATCAAAAACAACCTCCAGTTACCATGGAAACCACTAAGAGACTTAGTTGGCCACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS CAA 90 bp CATCTTGATTTCATGACATCCTCCACTAATGGGAACCATGGCTTCTaGAAGAAAGGGTTCATTCCTGGACTGCCTATCCACTTCTGGGAG +
Preference number: 6 (lower is better)
Translates to: HLDFMTSSTNGNHGF*KKGFIPGLPIHFWE
Trigger: CTCCCAGAAGTGGATAGGCAGTCCAGGAATGAACCCTTTCTTCAAGAAGCCATGGTTCCCATTAGTGGAGGATGTCATGAAATCAAGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592288.6
CDS TCA 72 bp TACACATCTTCTGTACTTGTAGAGTGGTCCCGAACATaGCTCCATTTTCTTCTCCATGGGCATTTGCCTCGG +
Preference number: 6 (lower is better)
Translates to: YTSSVLVEWSRT*LHFLLHGHLPR
Trigger: CCGAGGCAAATGCCCATGGAGAAGAAAATGGAGTCATGTTCGGGACCACTCTACAAGTACAGAAGATGTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585426.5
CDS GCA 72 bp GCAGGTGGCCGGCAATGTTTTACTGTCTTGTTTTGCTaGCGAAGCAGCAATGAAAGTGGAACTGTGATCTAT +
Preference number: 6 (lower is better)
Translates to: AGGRQCFTVLFC*RSSNESGTVIY
Trigger: ATAGATCACAGTTCCACTTTCATTGCTGCTTCGGCAGCAAAACAAGACAGTAAAACATTGCCGGCCACCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS GCA 72 bp GATGTACTAGTGCTTTGTTTGGCATTGTGTGTGCAGTaGCTCCCACCTCATCACCTTCTTTCATGGGCATAT +
Preference number: 6 (lower is better)
Translates to: DVLVLCLALCVQ*LPPHHLLSWAY
Trigger: ATATGCCCATGAAAGAAGGTGATGAGGTGGGAGGCACTGCACACACAATGCCAAACAAAGCACTAGTACATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS GCA 72 bp CTTGAATCTCGAGTGGAAGATGCTTCATCAGTTACCTaGTTCGAACAAACCGGAAGGAATGAACGGAACCAC +
Preference number: 6 (lower is better)
Translates to: LESRVEDASSVT*FEQTGRNERNH
Trigger: GTGGTTCCGTTCATTCCTTCCGGTTTGTTCGAAGCAGGTAACTGATGAAGCATCTTCCACTCGAGATTCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593235.1
CDS GCA 72 bp CCCGAACATGACTCCATTTTCTTCTCCATGGGCATTTaGCTCGGCCATATCTGTACCATCCAATTCAGATTC +
Preference number: 6 (lower is better)
Translates to: PEHDSIFFSMGI*LGHICTIQFRF
Trigger: GAATCTGAATTGGATGGTACAGATATGGCCGAGGCAAATGCCCATGGAGAAGAAAATGGAGTCATGTTCGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585426.5
CDS CAA 72 bp TTCATGACATCCTCCACTAATGGGAACCATGGCTTCTaGAAGAAAGGGTTCATTCCTGGACTGCCTATCCAC +
Preference number: 6 (lower is better)
Translates to: FMTSSTNGNHGF*KKGFIPGLPIH
Trigger: GTGGATAGGCAGTCCAGGAATGAACCCTTTCTTCAAGAAGCCATGGTTCCCATTAGTGGAGGATGTCATGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592288.6
CDS TCA 72 bp ATCGGTAGCCAAGGAAATAGCCTCTTCCATGGGACTTaGGGTGGAAGCTTTCATGTTCTGTGTTTGTTGTAC +
Preference number: 6 (lower is better)
Translates to: IGSQGNSLFHGT*GGSFHVLCLLY
Trigger: GTACAACAAACACAGAACATGAAAGCTTCCACCTCAAGTCCCATGGAAGAGGCTATTTCCTTGGCTACCGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS TCA 72 bp ATTGAGAGAATTTGGATAGCCCTGTCCCCTTCTCTATaGCATCACATCCTACTACACAGACTGTGCACAGAG +
Preference number: 6 (lower is better)
Translates to: IERIWIALSPSL*HHILLHRLCTE
Trigger: CTCTGTGCACAGTCTGTGTAGTAGGATGTGATGTCATAGAGAAGGGGACAGGGCTATCCAAATTCTCTCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642541.1
CDS GCA 72 bp AGGGAAGTCTTCAGTGTCCATTCTAAAGCCCTTGTCTaGTTCGTGAAGTTCAGATTTCACAGGAAGAGCAAC +
Preference number: 6 (lower is better)
Translates to: REVFSVHSKALV*FVKFRFHRKSN
Trigger: GTTGCTCTTCCTGTGAAATCTGAACTTCACGAAGCAGACAAGGGCTTTAGAATGGACACTGAAGACTTCCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS GCA 72 bp GGTCATAGGAAACTTGTTTCATGCCCAGTTCACAGCTaGTGCTTAAACCTTCCTCAAAAGAAAGAGGTTCCG +
Preference number: 6 (lower is better)
Translates to: GHRKLVSCPVHS*CLNLPQKKEVP
Trigger: CGGAACCTCTTTCTTTTGAGGAAGGTTTAAGCAGCAGCTGTGAACTGGGCATGAAACAAGTTTCCTATGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS GCA 72 bp GATGCTATTTGGCTTTTCCGTGTGGAAAAGGGATACTaGATCTTTCACTCAGCTCTTATCGTACAACCAGGC +
Preference number: 6 (lower is better)
Translates to: DAIWLFRVEKGY*IFHSALIVQPG
Trigger: GCCTGGTTGTACGATAAGAGCTGAGTGAAAGATGCAGTATCCCTTTTCCACACGGAAAAGCCAAATAGCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS GCA 72 bp TTGGTCCATTTCAAGTGCCCTGAAGGCGAATCCGACTaGTCATCAGACACCTTTAATGGTGTCAAAACAACA +
Preference number: 6 (lower is better)
Translates to: LVHFKCPEGESD*SSDTFNGVKTT
Trigger: TGTTGTTTTGACACCATTAAAGGTGTCTGATGAGCAGTCGGATTCGCCTTCAGGGCACTTGAAATGGACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590189.6
ENST00000681521.1
CDS CCA 72 bp AAGAAAGGGTTCATTCCTGGACTGCCTATCCACTTCTaGGAGCAAAAGCAGGAGGTATTGTTGAAAATGCTG +
Preference number: 6 (lower is better)
Translates to: KKGFIPGLPIHF*EQKQEVLLKML
Trigger: CAGCATTTTCAACAATACCTCCTGCTTTTGCTCCCAGAAGTGGATAGGCAGTCCAGGAATGAACCCTTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592288.6
CDS CAA 72 bp CCAGAATTATCTGCCCTGTTTCGAGGCCCTGAATTTTaGTCCAAGCTTTCAGCACTTAACTTGGGAGGACTA +
Preference number: 6 (lower is better)
Translates to: PELSALFRGPEF*SKLSALNLGGL
Trigger: TAGTCCTCCCAAGTTAAGTGCTGAAAGCTTGGACAAAAATTCAGGGCCTCGAAACAGGGCAGATAATTCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS CAA 72 bp ATGACTTCCAATATCTGCTTTGCTGTCATTGGTGAGTaGGGGTGTTTTTCTAGTGCTGTGGAGGATTCCCTG +
Preference number: 6 (lower is better)
Translates to: MTSNICFAVIGE*GCFSSAVEDSL
Trigger: CAGGGAATCCTCCACAGCACTAGAAAAACACCCCAACTCACCAATGACAGCAAAGCAGATATTGGAAGTCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000585426.5
ENST00000586327.6
ENST00000586948.1
ENST00000588038.5
ENST00000590225.5
ENST00000590973.2
ENST00000593235.1
ENST00000642541.1
ENST00000647014.1
CDS TCA 72 bp TTTCTCTCTGGTGCTGTTTTACCCACTGAGGTAGTTTaGAGAGGCAATGGAAGCCTGTTGATTTCAAGCTTG +
Preference number: 6 (lower is better)
Translates to: FLSGAVLPTEVV*RGNGSLLISSL
Trigger: CAAGCTTGAAATCAACAGGCTTCCATTGCCTCTTCAAACTACCTCAGTGGGTAAAACAGCACCAGAGAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS CCA 72 bp TGCCCTTTTGAAACTCGTGCTACCAAAGTGTATTGTTaGATAATTTCCACAGAGCTGCTGTTGTTGCTGCAC +
Preference number: 6 (lower is better)
Translates to: CPFETRATKVYC*IISTELLLLLH
Trigger: GTGCAGCAACAACAGCAGCTCTGTGGAAATTATCCAACAATACACTTTGGTAGCACGAGTTTCAAAAGGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS CAA 90 bp CTGCTGCTTAAACCTTCCTCAAAAGAAAGAGGTTCCGATTTTATATaGCTACATATGCCCGTGGACTGTGGCCAACTAAGTCTCTTAGTG +
Preference number: 6 (lower is better)
Translates to: LLLKPSSKERGSDFI*LHMPVDCGQLSLLV
Trigger: CACTAAGAGACTTAGTTGGCCACAGTCCACGGGCATATGTAGCAATATAAAATCGGAACCTCTTTCTTTTGAGGAAGGTTTAAGCAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS GCA 72 bp ACTAAGTTACTAGCACTGCTGCTTGATATTAGTAACTaGTTATCATCCATGGAGCTTGATATGCTGGAGCCC +
Preference number: 6 (lower is better)
Translates to: TKLLALLLDISN*LSSMELDMLEP
Trigger: GGGCTCCAGCATATCAAGCTCCATGGATGATAAGCAGTTACTAATATCAAGCAGCAGTGCTAGTAACTTAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS GCA 72 bp CATAGGAAACTTGTTTCATGCCCAGTTCACAGCTGCTaGTTAAACCTTCCTCAAAAGAAAGAGGTTCCGATT +
Preference number: 6 (lower is better)
Translates to: HRKLVSCPVHSC*LNLPQKKEVPI
Trigger: AATCGGAACCTCTTTCTTTTGAGGAAGGTTTAAGCAGCAGCTGTGAACTGGGCATGAAACAAGTTTCCTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS CCA 72 bp TATCTTCTCAGAAGGAAATCTGTTGTTAATTCCCATTaGGGGAATCAAGACAGAGCTAGTGGAGAGGTTTGG +
Preference number: 6 (lower is better)
Translates to: YLLRRKSVVNSH*GNQDRASGEVW
Trigger: CCAAACCTCTCCACTAGCTCTGTCTTGATTCCCCCAATGGGAATTAACAACAGATTTCCTTCTGAGAAGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS CCA 72 bp TGGCCAACTAAGTCTCTTAGTGGTTTCCATGGTAACTaGAGGTTGTTTTTGATCAGATGGGACTTCTGCATT +
Preference number: 6 (lower is better)
Translates to: WPTKSLSGFHGN*RLFLIRWDFCI
Trigger: AATGCAGAAGTCCCATCTGATCAAAAACAACCTCCAGTTACCATGGAAACCACTAAGAGACTTAGTTGGCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS CCA 72 bp TTCCGATTTTATATTGCTACATATGCCCGTGGACTGTaGCCAACTAAGTCTCTTAGTGGTTTCCATGGTAAC +
Preference number: 6 (lower is better)
Translates to: FRFYIATYARGL*PTKSLSGFHGN
Trigger: GTTACCATGGAAACCACTAAGAGACTTAGTTGGCCACAGTCCACGGGCATATGTAGCAATATAAAATCGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS CAA 72 bp TTAATTTATCTGGAACAAGGGGTAATTCTCGGAGACTaGTGCAGGTGGCCGGCAATGTTTTACTGTCTTGTT +
Preference number: 6 (lower is better)
Translates to: LIYLEQGVILGD*CRWPAMFYCLV
Trigger: AACAAGACAGTAAAACATTGCCGGCCACCTGCACAAGTCTCCGAGAATTACCCCTTGTTCCAGATAAATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS CAA 90 bp CCTTGTCTGCTTCGTGAAGTTCAGATTTCACAGGAAGAGCAACATTaGTTACAAGATTCCTGGGATGAAGTTCTGACACGTTCAAGTAGT +
Preference number: 6 (lower is better)
Translates to: PCLLREVQISQEEQH*LQDSWDEVLTRSSS
Trigger: ACTACTTGAACGTGTCAGAACTTCATCCCAGGAATCTTGTAACAAATGTTGCTCTTCCTGTGAAATCTGAACTTCACGAAGCAGACAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS GCA 72 bp TCTGATCCACTTCAACACTTCAGTGGTGGAACTAACTaGAGATGTGGTAGAAACAGCAAGAGAACTAGAATT +
Preference number: 6 (lower is better)
Translates to: SDPLQHFSGGTN*RCGRNSKRTRI
Trigger: AATTCTAGTTCTCTTGCTGTTTCTACCACATCTGCAGTTAGTTCCACCACTGAAGTGTTGAAGTGGATCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647014.1
CDS CCA 72 bp TATAATCATCATGGAAAGTTGTCCCAAATCCTTCATTaGAGGAAGATCCTTCATACACACCAACGCTGTCTC +
Preference number: 6 (lower is better)
Translates to: YNHHGKLSQILH*RKILHTHQRCL
Trigger: GAGACAGCGTTGGTGTGTATGAAGGATCTTCCTCCAATGAAGGATTTGGGACAACTTTCCATGATGATTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000585426.5
ENST00000586948.1
ENST00000588038.5
ENST00000590225.5
ENST00000590973.2
ENST00000592541.6
ENST00000593195.6
ENST00000593235.1
ENST00000642541.1
CDS CCA 72 bp GTTCCATTTCAGAAACGGACACTGCCAACCTTAATCTaGGCTTTCTGTCTTCCAGAACTTGTTTCTTTTAAC +
Preference number: 6 (lower is better)
Translates to: VPFQKRTLPTLI*AFCLPELVSFN
Trigger: GTTAAAAGAAACAAGTTCTGGAAGACAGAAAGCCCAGATTAAGGTTGGCAGTGTCCGTTTCTGAAATGGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586327.6
CDS CAA 72 bp AAACCTTCCTCAAAAGAAAGAGGTTCCGATTTTATATaGCTACATATGCCCGTGGACTGTGGCCAACTAAGT +
Preference number: 6 (lower is better)
Translates to: KPSSKERGSDFI*LHMPVDCGQLS
Trigger: ACTTAGTTGGCCACAGTCCACGGGCATATGTAGCAATATAAAATCGGAACCTCTTTCTTTTGAGGAAGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS CAA 90 bp AAAGCCATAGATAGCAATTCCTCTTATGGATCTGAGGAAAGTGAATaGAAAATCTTCAGAGAAGAGTTCACCCTGCTAGATGCCGTTGAG +
Preference number: 6 (lower is better)
Translates to: KAIDSNSSYGSEESE*KIFREEFTLLDAVE
Trigger: CTCAACGGCATCTAGCAGGGTGAACTCTTCTCTGAAGATTTTCAATTCACTTTCCTCAGATCCATAAGAGGAATTGCTATCTATGGCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647014.1
CDS TCA 72 bp TCATCATTCCAGCAAATCCGGTTACTTGGGTTATACTaGTTGCTACAGGTTGTGTCTGCTTCACTTTTGAAA +
Preference number: 6 (lower is better)
Translates to: SSFQQIRLLGLY*LLQVVSASLLK
Trigger: TTTCAAAAGTGAAGCAGACACAACCTGTAGCAATCAGTATAACCCAAGTAACCGGATTTGCTGGAATGATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS TCA 72 bp TCCCAATGGACTTTTCAATTGCAGATGCTGCCCTTTTaGAACTCGTGCTACCAAAGTGTATTGTTGGATAAT +
Preference number: 6 (lower is better)
Translates to: SQWTFQLQMLPF*NSCYQSVLLDN
Trigger: ATTATCCAACAATACACTTTGGTAGCACGAGTTTCAAAAGGGCAGCATCTGCAATTGAAAAGTCCATTGGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS TCA 72 bp ATGAAGACCTGGTGCTGCCTGTTAAGGTTGTTGAGGTaGTCCCAAATGGAAAATAGTTTGTCCCTAAATTAT +
Preference number: 6 (lower is better)
Translates to: MKTWCCLLRLLR*SQMENSLSLNY
Trigger: ATAATTTAGGGACAAACTATTTTCCATTTGGGATCACCTCAACAACCTTAACAGGCAGCACCAGGTCTTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588038.5
CDS CCA 72 bp GCCCTGAATTTTTGTCCAAGCTTTCAGCACTTAACTTaGGAGGACTATCATAAGAGTTTATTGTCAGCATGT +
Preference number: 6 (lower is better)
Translates to: ALNFCPSFQHLT*EDYHKSLLSAC
Trigger: ACATGCTGACAATAAACTCTTATGATAGTCCTCCCAAGTTAAGTGCTGAAAGCTTGGACAAAAATTCAGGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS CCA 72 bp ATTTCACAGGAAGAGCAACATTTGTTACAAGATTCCTaGGATGAAGTTCTGACACGTTCAAGTAGTTGGCAT +
Preference number: 6 (lower is better)
Translates to: ISQEEQHLLQDS*DEVLTRSSSWH
Trigger: ATGCCAACTACTTGAACGTGTCAGAACTTCATCCCAGGAATCTTGTAACAAATGTTGCTCTTCCTGTGAAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269197.12
ENST00000681521.1
CDS CCA 72 bp GTCACAATAGCAACATTAACAAGAGTATGGAAGAAGTaGATTCTGATCCACTTCAACACTTCAGTGGTGGAA +
Preference number: 6 (lower is better)
Translates to: VTIATLTRVWKK*ILIHFNTSVVE
Trigger: TTCCACCACTGAAGTGTTGAAGTGGATCAGAATCCACTTCTTCCATACTCTTGTTAATGTTGCTATTGTGAC
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647014.1
CDS CAA 72 bp CTAGATGCCGTTGAGAACATTCATGATTCACAGGAGTaGGTCACAATAGCAACATTAACAAGAGTATGGAAG +
Preference number: 6 (lower is better)
Translates to: LDAVENIHDSQE*VTIATLTRVWK
Trigger: CTTCCATACTCTTGTTAATGTTGCTATTGTGACCAACTCCTGTGAATCATGAATGTTCTCAACGGCATCTAG
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647014.1
CDS TCA 72 bp CATATGCAAAGAATTCATTATTTAGAGCTGAAGTACTaGGGCGTAAAATTCCATCACTTCCCATCTTTCATG +
Preference number: 6 (lower is better)
Translates to: HMQRIHYLELKY*GVKFHHFPSFM
Trigger: CATGAAAGATGGGAAGTGATGGAATTTTACGCCTCAGTACTTCAGCTCTAAATAATGAATTCTTTGCATATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592288.6
CDS CCA 72 bp ATAGACCTTCCACTTCATCATAATATAACTAGTGGCTaGTATCAAATGTCTAAAACTTCTACTTACCTGCCT +
Preference number: 6 (lower is better)
Translates to: IDLPLHHNITSG*YQMSKTSTYLP
Trigger: AGGCAGGTAAGTAGAAGTTTTAGACATTTGATACCAGCCACTAGTTATATTATGATGAAGTGGAAGGTCTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590189.6