RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ASXL1 (Homo sapiens)

Ensembl gene IDs: ENSG00000171456

Ensembl transcript IDs: ENST00000306058.9, ENST00000375687.10, ENST00000375689.5, ENST00000470145.3, ENST00000497249.6, ENST00000542461.5, ENST00000553345.5, ENST00000555343.2, ENST00000555564.2, ENST00000613218.4, ENST00000619344.4, ENST00000620121.4, ENST00000642676.1, ENST00000643168.1, ENST00000644060.1, ENST00000644168.1, ENST00000644587.1, ENST00000644615.1, ENST00000645035.1, ENST00000645337.1, ENST00000645688.1, ENST00000646367.1, ENST00000646985.1, ENST00000647223.1, ENST00000649901.1, ENST00000651418.1

Found 1845 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGGCAGGCTGACTGTGGCTCTGCAGGCTGCAGCAGGTCCAGCCGGTaGCCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATC +
Preference number: 1 (lower is better)
Translates to: GQADCGSAGCSRSSR*PNRASGNLAGHKSI
Trigger: GATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACCGGCTGGACCTGCTGCAGCCTGCAGAGCCACAGTCAGCCTGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
3UTR CCA 90 bp GCTGCAGCAGGTCCAGCCGGTGACCCAACAGGGCATCGGGCAACCTaGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCAC +
Preference number: 1 (lower is better)
Translates to: AAAGPAGDPTGHRAT*QVTSQSFHPHVEQH
Trigger: GTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACCGGCTGGACCTGCTGCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
3UTR TCA 90 bp AAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGGTATTGCTGTaGCAGGTGGTGACCCTGGAGCCAGATCTGGAAGGCCTTCCTGGG +
Preference number: 1 (lower is better)
Translates to: KEPHSPRRAWSQVLL*QVVTLEPDLEGLPG
Trigger: CCCAGGAAGGCCTTCCAGATCTGGCTCCAGGGTCACCACCTGTCACAGCAATACCTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
3UTR CCA 90 bp CCACATCAGGCTCTGTCTTGCAGGAGAGCTCAGGCTGGCTGGCCTTaGGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGAC +
Preference number: 1 (lower is better)
Translates to: PHQALSCRRAQAGWP*AAQWVIPRKPLQQD
Trigger: GTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCCCAAGGCCAGCCAGCCTGAGCTCTCCTGCAAGACAGAGCCTGATGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
3UTR GCA 90 bp CAGGTGGTGACCCTGGAGCCAGATCTGGAAGGCCTTCCTGGGGGCTaGCCAGGGAACTCACCCATGAATCCAGAAGCACTTAACACTGGT +
Preference number: 1 (lower is better)
Translates to: QVVTLEPDLEGLPGG*PGNSPMNPEALNTG
Trigger: ACCAGTGTTAAGTGCTTCTGGATTCATGGGTGAGTTCCCTGGGCAGCCCCCAGGAAGGCCTTCCAGATCTGGCTCCAGGGTCACCACCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
3UTR CCA 90 bp ACATCAGCCGTGTCCTCTGGCTCCTCTCCCTCCACTGTAGCTGGATaGCGAGACCACTGCAGGGCATCCTTCTGTAATCCATCCCAGTGC +
Preference number: 1 (lower is better)
Translates to: TSAVSSGSSPSTVAG*RDHCRASFCNPSQC
Trigger: GCACTGGGATGGATTACAGAAGGATGCCCTGCAGTGGTCTCGCCATCCAGCTACAGTGGAGGGAGAGGAGCCAGAGGACACGGCTGATGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644587.1
3UTR CCA 90 bp GACTCAACTGTGACCCTGAGGTCAGCAGGTGCACCAGCCCCCTGGTaGGCAATGCCAGGAGTTACTTTAACCCTGTGCTGGCTTCTTTCC +
Preference number: 1 (lower is better)
Translates to: DSTVTLRSAGAPAPW*AMPGVTLTLCWLLS
Trigger: GGAAAGAAGCCAGCACAGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGACCTCAGGGTCACAGTTGAGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
3UTR GCA 90 bp GCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGTaGTGGCTTCTTTCCTGGCCATCAACTCCCCAAAGTAGCAGAAGA +
Preference number: 1 (lower is better)
Translates to: APAPWWAMPGVTLTL*WLLSWPSTPQSSRR
Trigger: TCTTCTGCTACTTTGGGGAGTTGATGGCCAGGAAAGAAGCCAGCACAGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
3UTR CCA 90 bp AATGACTCAACTGTGACCCTGAGGTCAGCAGGTGCACCAGCCCCCTaGTGGGCAATGCCAGGAGTTACTTTAACCCTGTGCTGGCTTCTT +
Preference number: 1 (lower is better)
Translates to: NDSTVTLRSAGAPAP*WAMPGVTLTLCWLL
Trigger: AAGAAGCCAGCACAGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGACCTCAGGGTCACAGTTGAGTCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
3UTR TCA 90 bp TTCAGCAACAGAACCAAGGTCAAACTTGCTCCGTCAACTGGCAAATaGCTCAACTGTGACCCTGAGGTCAGCAGGTGCACCAGCCCCCTG +
Preference number: 1 (lower is better)
Translates to: FSNRTKVKLAPSTGK*LNCDPEVSRCTSPL
Trigger: CAGGGGGCTGGTGCACCTGCTGACCTCAGGGTCACAGTTGAGTCATTTGCCAGTTGACGGAGCAAGTTTGACCTTGGTTCTGTTGCTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR TCA 90 bp TCTCTGGGCAGCCTCATGGACCAGATCAGTGTCAAACTGTACCCTTaGGTGTCCCCAAAGGTTCCAGCAGAGGGAAGAAGAGGACTGGAC +
Preference number: 1 (lower is better)
Translates to: SLGSLMDQISVKLYP*VSPKVPAEGRRGLD
Trigger: GTCCAGTCCTCTTCTTCCCTCTGCTGGAACCTTTGGGGACACTCAAGGGTACAGTTTGACACTGATCTGGTCCATGAGGCTGCCCAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR CCA 90 bp CCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGTGCTaGCTTCTTTCCTGGCCATCAACTCCCCAAAGTAGCAGAAGAAAA +
Preference number: 1 (lower is better)
Translates to: PAPWWAMPGVTLTLC*LLSWPSTPQSSRRK
Trigger: TTTTCTTCTGCTACTTTGGGGAGTTGATGGCCAGGAAAGAAGCCAGCACAGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
3UTR CCA 90 bp TGGGCAATGCCAGGAGTTACTTTAACCCTGTGCTGGCTTCTTTCCTaGCCATCAACTCCCCAAAGTAGCAGAAGAAAAGATGGCAGGGAG +
Preference number: 1 (lower is better)
Translates to: WAMPGVTLTLCWLLS*PSTPQSSRRKDGRE
Trigger: CTCCCTGCCATCTTTTCTTCTGCTACTTTGGGGAGTTGATGGCCAGGAAAGAAGCCAGCACAGGGTTAAAGTAACTCCTGGCATTGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
3UTR TCA 90 bp GGAGGATGTCAAGCAGAGGAATTCACCTGCAAACATCTGGACGGCTaGCTCACAAGGTCTACAGATGGCATTTTCATAGGAAAGACAACC +
Preference number: 1 (lower is better)
Translates to: GGCQAEEFTCKHLDG*LTRSTDGIFIGKTT
Trigger: GGTTGTCTTTCCTATGAAAATGCCATCTGTAGACCTTGTGAGTCAGCCGTCCAGATGTTTGCAGGTGAATTCCTCTGCTTGACATCCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR GCA 90 bp TCCTGTGGGTTAGTGGATCACACTGAGACAGAAAAGTTCCAAATTTaGTTCAGCAACAGAACCAAGGTCAAACTTGCTCCGTCAACTGGC +
Preference number: 1 (lower is better)
Translates to: SCGLVDHTETEKFQI*FSNRTKVKLAPSTG
Trigger: GCCAGTTGACGGAGCAAGTTTGACCTTGGTTCTGTTGCTGAAGCAAATTTGGAACTTTTCTGTCTCAGTGTGATCCACTAACCCACAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR CCA 90 bp TATTGTTCCAATACCACAAGAGACATACAGAAGCAGTGCTTTCTCTaGGCAGCCTCATGGACCAGATCAGTGTCAAACTGTACCCTTGAG +
Preference number: 1 (lower is better)
Translates to: YCSNTTRDIQKQCFL*AASWTRSVSNCTLE
Trigger: CTCAAGGGTACAGTTTGACACTGATCTGGTCCATGAGGCTGCCCAGAGAAAGCACTGCTTCTGTATGTCTCTTGTGGTATTGGAACAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR CCA 90 bp CCCCTGTTCCCGGTCTTTGGTAAACAGACGCTTAAGTTGACAACTTaGACTTGGCCAATACTGCATTCTAAATCACCACATCATTCCCAA +
Preference number: 1 (lower is better)
Translates to: PLFPVFGKQTLKLTT*TWPILHSKSPHHSQ
Trigger: TTGGGAATGATGTGGTGATTTAGAATGCAGTATTGGCCAAGTCCAAGTTGTCAACTTAAGCGTCTGTTTACCAAAGACCGGGAACAGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
3UTR GCA 90 bp CCTGGGATTGGAAAGAGGTCGACTCTGAGATTCTGTAGAACAGGATaGGTTCGAAGATGTTTCATCAAGAGATACATCGTTTTCACCACT +
Preference number: 1 (lower is better)
Translates to: PGIGKRSTLRFCRTG*VRRCFIKRYIVFTT
Trigger: AGTGGTGAAAACGATGTATCTCTTGATGAAACATCTTCGAACGCATCCTGTTCTACAGAATCTCAGAGTCGACCTCTTTCCAATCCCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644587.1
3UTR CCA 90 bp TTCCCGGTCTTTGGTAAACAGACGCTTAAGTTGACAACTTGGACTTaGCCAATACTGCATTCTAAATCACCACATCATTCCCAACTTGTC +
Preference number: 1 (lower is better)
Translates to: FPVFGKQTLKLTTWT*PILHSKSPHHSQLV
Trigger: GACAAGTTGGGAATGATGTGGTGATTTAGAATGCAGTATTGGCCAAGTCCAAGTTGTCAACTTAAGCGTCTGTTTACCAAAGACCGGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
3UTR GCA 90 bp GTGACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTaGTCCTGCCTAAAGAGTATTATATCAATGATATTCTGTATACAG +
Preference number: 1 (lower is better)
Translates to: VTEGFSSVNFGGRQE*SCLKSIISMIFCIQ
Trigger: CTGTATACAGAATATCATTGATATAATACTCTTTAGGCAGGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGTCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
3UTR-3UTR CCA 90 bp GTGACAGGTGGTGACCCTGGAGCCAGATCTGGAAGGCCTTCCTGGGGGCTGCCCAGAGCTCAGGCTGGCTaGCCTTGGGCAGCCCAATGG +
Preference number: 2 (lower is better)
Translates to: VTGGDPGARSGRPSWGLPRAQAG*PWAAQW
Trigger: CCATTGGGCTGCCCAAGGCCAGCCAGCCTGAGCTCT...GGGCAGCCCCCAGGAAGGCCTTCCAGATCTGGCTCCAGGGTCACCACCTGTCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR-3UTR CCA 90 bp CAGAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTAAGAGCTCAGGCTGGCTaGCCTTGGGCAGCCCAATGG +
Preference number: 2 (lower is better)
Translates to: QREEEDWTCLGPCSRSLVRAQAG*PWAAQW
Trigger: CCATTGGGCTGCCCAAGGCCAGCCAGCCTGAGCTCT...TACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR-3UTR GCA 90 bp CCAGCAGAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTCGCAACCCCACTCCGTaGCACATCAGGCTCTGTCTT +
Preference number: 2 (lower is better)
Translates to: PAEGRRGLDMFGPLFPVFRNPTP*HIRLCL
Trigger: AAGACAGAGCCTGATGTGGCACGGAGTGGGGTTGCG...AAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTCTGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR-3UTR CCA 90 bp AGATTCCACGTGGGCCCCGTTTACCTTCAGAGGAGTCAGGACAACTCGAGGCAGTCCCTCCACTGTAGCTaGATGGCGAGACCACTGCAG +
Preference number: 2 (lower is better)
Translates to: RFHVGPVYLQRSQDNSRQSLHCS*MARPLQ
Trigger: CTGCAGTGGTCTCGCCATCCAGCTACAGTGGAGGGA...CTGCCTCGAGTTGTCCTGACTCCTCTGAAGGTAAACGGGGCCCACGTGGAATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644587.1
3UTR-3UTR GCA 90 bp AAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGGTATTGCTGTGACAGGTCATCAGGCTCTGTCTTaGAGGAGAGCTCAGGCTGGC +
Preference number: 2 (lower is better)
Translates to: KGASQSQESMVPGIAVTGHQALS*RRAQAG
Trigger: GCCAGCCTGAGCTCTCCTGCAAGACAGAGCCTGATG...ACCTGTCACAGCAATACCTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR-3UTR GCA 90 bp AGGTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCGGGGGAAGGCAAGAGTaGTCCTGCCTAAAGAGTATT +
Preference number: 2 (lower is better)
Translates to: RSAGAPAPWWAMPGVTLTGGRQE*SCLKSI
Trigger: AATACTCTTTAGGCAGGAGCACTCTTGCCTTCCCCC...GGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
3UTR-3UTR CCA 90 bp CAGAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTACCTTGGGCAGCCCAATaGGTTATACCCAGGAAACCC +
Preference number: 2 (lower is better)
Translates to: QREEEDWTCLGPCSRSLVPWAAQ*VIPRKP
Trigger: GGGTTTCCTGGGTATAACCCATTGGGCTGCCCAAGG...TACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR-3UTR CCA 90 bp GAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTAAACAGGCTGGCTGGCCTTaGGCAGCCCAATGGGTTATA +
Preference number: 2 (lower is better)
Translates to: EGRRGLDMFGPLFPVFGKQAGWP*AAQWVI
Trigger: TATAACCCATTGGGCTGCCCAAGGCCAGCCAGCCTG...TTTACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR-3UTR CCA 90 bp ATGTCAAAAGTACGTCAAAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGGCACCAGCCCCCTGGTaGGCAATGCCAGGAGTTACT +
Preference number: 2 (lower is better)
Translates to: MSKVRQKEPHSPRRAWSQAPAPW*AMPGVT
Trigger: AGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGC...CTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTTTGACGTACTTTTGACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR-3UTR CCA 90 bp GTCAAAAGTACGTCAAAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGGTGATGCGTTTGCTCGGTaGCATGTGGGCAGGCTGACT +
Preference number: 2 (lower is better)
Translates to: VKSTSKGASQSQESMVPGDAFAR*HVGRLT
Trigger: AGTCAGCCTGCCCACATGCCACCGAGCAAACGCATC...ACCTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTTTGACGTACTTTTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
3UTR-3UTR CCA 90 bp TTCACCACTCACAGTGCTGGCTTCATTAGACCCACAGCTCTCCACATCAGCCGTTCCACTGTAGCTGGATaGCGAGACCACTGCAGGGCA +
Preference number: 2 (lower is better)
Translates to: FTTHSAGFIRPTALHISRSTVAG*RDHCRA
Trigger: TGCCCTGCAGTGGTCTCGCCATCCAGCTACAGTGGA...ACGGCTGATGTGGAGAGCTGTGGGTCTAATGAAGCCAGCACTGTGAGTGGTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644587.1
3UTR-3UTR TCA 90 bp GAGAGGCAGGAGCAGGCATGGCTTTGTTTCTTCCCAAACCTGCCTGATGTCAAATCCCAGGTATTGCTGTaGCAGGTGGTGACCCTGGAG +
Preference number: 2 (lower is better)
Translates to: ERQEQAWLCFFPNLPDVKSQVLL*QVVTLE
Trigger: CTCCAGGGTCACCACCTGTCACAGCAATACCTGGGA...TTTGACATCAGGCAGGTTTGGGAAGAAACAAAGCCATGCCTGCTCCTGCCTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
3UTR-3UTR GCA 90 bp AAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGGTATTGCTGTGACAGGTTTTCACATACACAGGTaGGTGGAGATGCCCACTCCC +
Preference number: 2 (lower is better)
Translates to: KGASQSQESMVPGIAVTGFHIHR*VEMPTP
Trigger: GGGAGTGGGCATCTCCACGCACCTGTGTATGTGAAA...ACCTGTCACAGCAATACCTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR-3UTR CCA 90 bp GGGGGTAGTGGAAGACTGGCATTTCTACTTAGTTCAGGTAGGTTAACTCCCTTGAGAGCTCAGGCTGGCTaGCCTTGGGCAGCCCAATGG +
Preference number: 2 (lower is better)
Translates to: GGSGRLAFLLSSGRLTPLRAQAG*PWAAQW
Trigger: CCATTGGGCTGCCCAAGGCCAGCCAGCCTGAGCTCT...CAAGGGAGTTAACCTACCTGAACTAAGTAGAAATGCCAGTCTTCCACTACCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
3UTR-3UTR CCA 90 bp CCAGCAGAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTAGGCAGGAGCAGGCATaGCTTTGTTTCTTCCCAAAC +
Preference number: 2 (lower is better)
Translates to: PAEGRRGLDMFGPLFPVFRQEQA*LCFFPN
Trigger: GTTTGGGAAGAAACAAAGCCATGCCTGCTCCTGCCT...AAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTCTGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
3UTR-3UTR CCA 90 bp GCCCCGTTTACCTTCAGAGGAGTCAGGACAACTCGAGGCAGCATCACCCCAGTCTTTGTGAAGCTGTGGTaGGAAGATCACTTGAGGCCA +
Preference number: 2 (lower is better)
Translates to: APFTFRGVRTTRGSITPVFVKLW*EDHLRP
Trigger: TGGCCTCAAGTGATCTTCCCACCACAGCTTCACAAA...GACTGGGGTGATGCTGCCTCGAGTTGTCCTGACTCCTCTGAAGGTAAACGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644587.1
3UTR-3UTR CCA 90 bp GCCCCGTTTACCTTCAGAGGAGTCAGGACAACTCGAGGCAGCATCACCCCAGTCTGCTTTGTGAAGCTGTaGTGGGAAGATCACTTGAGG +
Preference number: 2 (lower is better)
Translates to: APFTFRGVRTTRGSITPVCFVKL*WEDHLR
Trigger: CCTCAAGTGATCTTCCCACCACAGCTTCACAAAGCA...GACTGGGGTGATGCTGCCTCGAGTTGTCCTGACTCCTCTGAAGGTAAACGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644587.1
3UTR CAA 90 bp TTCTCTGGGCAGCCTCATGGACCAGATCAGTGTCAAACTGTACCCTaGAGTGTCCCCAAAGGTTCCAGCAGAGGGAAGAAGAGGACTGGA +
Preference number: 2 (lower is better)
Translates to: FSGQPHGPDQCQTVP*SVPKGSSRGKKRTG
Trigger: TCCAGTCCTCTTCTTCCCTCTGCTGGAACCTTTGGGGACACTCAAGGGTACAGTTTGACACTGATCTGGTCCATGAGGCTGCCCAGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR-3UTR TCA 90 bp CTGATGCAGATTCCACGTGGGCCCCGTTTACCTTCAGAGGAGTCAGGACAACTCTTGTTTGTTCGCCTGTaGGGAAGCTCTGTAGCTGTC +
Preference number: 2 (lower is better)
Translates to: LMQIPRGPRLPSEESGQLLFVRL*GSSVAV
Trigger: GACAGCTACAGAGCTTCCTCACAGGCGAACAAACAA...GAGTTGTCCTGACTCCTCTGAAGGTAAACGGGGCCCACGTGGAATCTGCATCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644587.1
3UTR-3UTR GCA 90 bp CAGAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTAGGGGGAAGGCAAGAGTaGTCCTGCCTAAAGAGTATT +
Preference number: 2 (lower is better)
Translates to: QREEEDWTCLGPCSRSLVGGRQE*SCLKSI
Trigger: AATACTCTTTAGGCAGGAGCACTCTTGCCTTCCCCC...TACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR-3UTR GCA 90 bp CTTGGTGGAGAATGCAACCTTCTTGCTTCAGTTTCAAGTCCCTCTGGGAGTCAGCATCAGGCTCTGTCTTaGAGGAGAGCTCAGGCTGGC +
Preference number: 2 (lower is better)
Translates to: LGGECNLLASVSSPSGSQHQALS*RRAQAG
Trigger: GCCAGCCTGAGCTCTCCTGCAAGACAGAGCCTGATG...CTGACTCCCAGAGGGACTTGAAACTGAAGCAAGAAGGTTGCATTCTCCACCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
3UTR-3UTR GCA 90 bp AAAAGTACGTCAAAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGGTATTCGCAACCCCACTCCGTaGCACATCAGGCTCTGTCTT +
Preference number: 2 (lower is better)
Translates to: KSTSKGASQSQESMVPGIRNPTP*HIRLCL
Trigger: AAGACAGAGCCTGATGTGGCACGGAGTGGGGTTGCG...AATACCTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTTTGACGTACTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR-3UTR GCA 90 bp GCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGTGCAGAATGCAACCTTCTTaGTTCAGTTTCAAGTCCCTC +
Preference number: 2 (lower is better)
Translates to: AGAPAPWWAMPGVTLTLCRMQPS*FSFKSL
Trigger: GAGGGACTTGAAACTGAAGCAAGAAGGTTGCATTCT...GCACAGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
3UTR-3UTR CCA 90 bp TCAATCATTTCACCCTCACGTCGAGCAGCACAGCACTCAGTGGCTCTGACAACACCTTGGGCAGCCCAATaGGTTATACCCAGGAAACCC +
Preference number: 2 (lower is better)
Translates to: SIISPSRRAAQHSVALTTPWAAQ*VIPRKP
Trigger: GGGTTTCCTGGGTATAACCCATTGGGCTGCCCAAGG...TGTTGTCAGAGCCACTGAGTGCTGTGCTGCTCGACGTGAGGGTGAAATGATTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR-3UTR CCA 90 bp GGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACTGCTGGCTTCTTTCCTaGCCATCAACTCCCCAAAGT +
Preference number: 2 (lower is better)
Translates to: GDPTGHRATWQVTSQSFHCWLLS*PSTPQS
Trigger: ACTTTGGGGAGTTGATGGCCAGGAAAGAAGCCAGCA...GTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR-3UTR CCA 90 bp GTAGCTGTCCCTGGGATTGGAAAGAGGTCGACTCTGAGATTCTGTAGAACAGGAATCAGCCGTGTCCTCTaGCTCCTCTCCCTCCACTGT +
Preference number: 2 (lower is better)
Translates to: VAVPGIGKRSTLRFCRTGISRVL*LLSLHC
Trigger: ACAGTGGAGGGAGAGGAGCCAGAGGACACGGCTGAT...TCCTGTTCTACAGAATCTCAGAGTCGACCTCTTTCCAATCCCAGGGACAGCTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644587.1
3UTR-3UTR TCA 90 bp AAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGGTATTGCTGTGACAGGTAAACATCTGGACGGCTaGCTCACAAGGTCTACAGAT +
Preference number: 2 (lower is better)
Translates to: KGASQSQESMVPGIAVTGKHLDG*LTRSTD
Trigger: ATCTGTAGACCTTGTGAGTCAGCCGTCCAGATGTTT...ACCTGTCACAGCAATACCTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR-3UTR GCA 90 bp AGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTAAACGGGGGAAGGCAAGAGTaGTCCTGCCTAAAGAGTATT +
Preference number: 2 (lower is better)
Translates to: REEEDWTCLGPCSRSLVNGGRQE*SCLKSI
Trigger: AATACTCTTTAGGCAGGAGCACTCTTGCCTTCCCCC...GTTTACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR-3UTR GCA 90 bp GGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACAGCACTCAGTGGGGGAAGGCAAGAGTaGTCCTGCCTAAAGAGTATT +
Preference number: 2 (lower is better)
Translates to: GRSQVNHFTLTSSSTALSGGRQE*SCLKSI
Trigger: AATACTCTTTAGGCAGGAGCACTCTTGCCTTCCCCC...ACTGAGTGCTGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR-3UTR GCA 90 bp GGGGGTAGTGGAAGACTGGCATTTCTACTTAGTTCAGGTAGGTTAACTCCCTTGCGCAACCCCACTCCGTaGCACATCAGGCTCTGTCTT +
Preference number: 2 (lower is better)
Translates to: GGSGRLAFLLSSGRLTPLRNPTP*HIRLCL
Trigger: AAGACAGAGCCTGATGTGGCACGGAGTGGGGTTGCG...CAAGGGAGTTAACCTACCTGAACTAAGTAGAAATGCCAGTCTTCCACTACCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
3UTR-3UTR GCA 90 bp GAGAGGCAGGAGCAGGCATGGCTTTGTTTCTTCCCAAACCTGCCTGATGTCAAAAAAGCAAGATGCGTTTaGTCGGTGGCATGTGGGCAG +
Preference number: 2 (lower is better)
Translates to: ERQEQAWLCFFPNLPDVKKARCV*SVACGQ
Trigger: CTGCCCACATGCCACCGAGCAAACGCATCTTGCTTT...TTTGACATCAGGCAGGTTTGGGAAGAAACAAAGCCATGCCTGCTCCTGCCTCTC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
3UTR-3UTR CCA 90 bp GTCAAAAGTACGTCAAAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGGTTGCTGGCTTCTTTCCTaGCCATCAACTCCCCAAAGT +
Preference number: 2 (lower is better)
Translates to: VKSTSKGASQSQESMVPGCWLLS*PSTPQS
Trigger: ACTTTGGGGAGTTGATGGCCAGGAAAGAAGCCAGCA...ACCTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTTTGACGTACTTTTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR-3UTR TCA 90 bp GTCAAAAGTACGTCAAAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGGTGTAGGAGGAGAGATGTaGAAAGCAAGATGCGTTTGC +
Preference number: 2 (lower is better)
Translates to: VKSTSKGASQSQESMVPGVGGEM*KARCVC
Trigger: GCAAACGCATCTTGCTTTTCACATCTCTCCTCCTAC...ACCTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTTTGACGTACTTTTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
3UTR-3UTR GCA 90 bp TCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGAGGCAAGAGTGCTCCTaGCTAAAGAGTATTATATCA +
Preference number: 2 (lower is better)
Translates to: SAGAPAPWWAMPGVTLTLRQECS*LKSIIS
Trigger: TGATATAATACTCTTTAGGCAGGAGCACTCTTGCCT...CAGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
3UTR-3UTR GCA 90 bp CTGGCATTTCTACTTAGTTCAGGTAGGTTAACTCCCTTGGTGGAGAATGCAACCCATCAGGCTCTGTCTTaGAGGAGAGCTCAGGCTGGC +
Preference number: 2 (lower is better)
Translates to: LAFLLSSGRLTPLVENATHQALS*RRAQAG
Trigger: GCCAGCCTGAGCTCTCCTGCAAGACAGAGCCTGATG...GGTTGCATTCTCCACCAAGGGAGTTAACCTACCTGAACTAAGTAGAAATGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
3UTR-3UTR GCA 90 bp GCCGGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTAGAATGCAACCTTCTTaGTTCAGTTTCAAGTCCCTC +
Preference number: 2 (lower is better)
Translates to: AGDPTGHRATWQVTSQSFRMQPS*FSFKSL
Trigger: GAGGGACTTGAAACTGAAGCAAGAAGGTTGCATTCT...AAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACCGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR-3UTR GCA 90 bp AGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTAAACGTTACTTTAACCCTGTaGTGGCTTCTTTCCTGGCCA +
Preference number: 2 (lower is better)
Translates to: REEEDWTCLGPCSRSLVNVTLTL*WLLSWP
Trigger: TGGCCAGGAAAGAAGCCAGCACAGGGTTAAAGTAAC...GTTTACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR-3UTR GCA 90 bp GAGATGCCCACTCCCATAGGGTCCAAAGTGACAGGGAGGATGTCAAGCAGAGGAAACCAAGGTCAAACTTaGTCCGTCAACTGGCAAATG +
Preference number: 2 (lower is better)
Translates to: EMPTPIGSKVTGRMSSRGNQGQT*SVNWQM
Trigger: CATTTGCCAGTTGACGGAGCAAGTTTGACCTTGGTT...TCCTCTGCTTGACATCCTCCCTGTCACTTTGGACCCTATGGGAGTGGGCATCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR-3UTR GCA 90 bp CAGAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTAAACCAAGGTCAAACTTaGTCCGTCAACTGGCAAATG +
Preference number: 2 (lower is better)
Translates to: QREEEDWTCLGPCSRSLVNQGQT*SVNWQM
Trigger: CATTTGCCAGTTGACGGAGCAAGTTTGACCTTGGTT...TACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR-3UTR GCA 90 bp GTCCCTGGGATTGGAAAGAGGTCGACTCTGAGATTCTGTAGAACAGGATGCGTTGGATGGCGAGACCACTaGAGGGCATCCTTCTGTAAT +
Preference number: 2 (lower is better)
Translates to: VPGIGKRSTLRFCRTGCVGWRDH*RASFCN
Trigger: ATTACAGAAGGATGCCCTGCAGTGGTCTCGCCATCC...AACGCATCCTGTTCTACAGAATCTCAGAGTCGACCTCTTTCCAATCCCAGGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644587.1
3UTR-3UTR CCA 90 bp GGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACAGGGGTAGTGGAAGACTaGCATTTCTACTTAGTTCAG +
Preference number: 2 (lower is better)
Translates to: GQPGRSQVNHFTLTSSSTGVVED*HFYLVQ
Trigger: CTGAACTAAGTAGAAATGCCAGTCTTCCACTACCCC...TGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR-3UTR CCA 90 bp ATGTCAAAAGTACGTCAAAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGTCACCTGCAAACATCTaGACGGCTGACTCACAAGGT +
Preference number: 2 (lower is better)
Translates to: MSKVRQKEPHSPRRAWSQSPANI*TADSQG
Trigger: ACCTTGTGAGTCAGCCGTCCAGATGTTTGCAGGTGA...CTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTTTGACGTACTTTTGACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR-3UTR TCA 90 bp GCCGGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTGTTAGTGGATCACACTaGGACAGAAAAGTTCCAAAT +
Preference number: 2 (lower is better)
Translates to: AGDPTGHRATWQVTSQSFVSGSH*DRKVPN
Trigger: ATTTGGAACTTTTCTGTCTCAGTGTGATCCACTAAC...AAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACCGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR-3UTR TCA 90 bp GAGAGGCAGGAGCAGGCATGGCTTTGTTTCTTCCCAAACCTGCCTGATGTCAAAGTAGGAGGAGAGATGTaGAAAGCAAGATGCGTTTGC +
Preference number: 2 (lower is better)
Translates to: ERQEQAWLCFFPNLPDVKVGGEM*KARCVC
Trigger: GCAAACGCATCTTGCTTTTCACATCTCTCCTCCTAC...TTTGACATCAGGCAGGTTTGGGAAGAAACAAAGCCATGCCTGCTCCTGCCTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
3UTR-3UTR GCA 90 bp TGTAGGAGGAGAGATGTGAAAAGCAAGATGCGTTTGCTCGGTGGCATGTGGGCAGTTACTTTAACCCTGTaGTGGCTTCTTTCCTGGCCA +
Preference number: 2 (lower is better)
Translates to: CRRRDVKSKMRLLGGMWAVTLTL*WLLSWP
Trigger: TGGCCAGGAAAGAAGCCAGCACAGGGTTAAAGTAAC...TGCCCACATGCCACCGAGCAAACGCATCTTGCTTTTCACATCTCTCCTCCTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR-3UTR CCA 90 bp CTGGCATTTCTACTTAGTTCAGGTAGGTTAACTCCCTTGGTGGAGAATGCAACCCCTTGGGCAGCCCAATaGGTTATACCCAGGAAACCC +
Preference number: 2 (lower is better)
Translates to: LAFLLSSGRLTPLVENATPWAAQ*VIPRKP
Trigger: GGGTTTCCTGGGTATAACCCATTGGGCTGCCCAAGG...GGTTGCATTCTCCACCAAGGGAGTTAACCTACCTGAACTAAGTAGAAATGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
3UTR-3UTR CCA 90 bp GAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTAAAGGGGTAGTGGAAGACTaGCATTTCTACTTAGTTCAG +
Preference number: 2 (lower is better)
Translates to: EGRRGLDMFGPLFPVFGKGVVED*HFYLVQ
Trigger: CTGAACTAAGTAGAAATGCCAGTCTTCCACTACCCC...TTTACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR-3UTR CCA 90 bp CAGACGCTTAAGTTGACAACTTGGACTTGGCCAATACTGCATTCTAAATCACCAGCACCAGCCCCCTGGTaGGCAATGCCAGGAGTTACT +
Preference number: 2 (lower is better)
Translates to: QTLKLTTWTWPILHSKSPAPAPW*AMPGVT
Trigger: AGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGC...TGGTGATTTAGAATGCAGTATTGGCCAAGTCCAAGTTGTCAACTTAAGCGTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR-3UTR CCA 90 bp TTTGTTTCTTCCCAAACCTGCCTGATGTCAAAAGTACGTCAAAAGGAGCCTCACGATGCGTTTGCTCGGTaGCATGTGGGCAGGCTGACT +
Preference number: 2 (lower is better)
Translates to: FVSSQTCLMSKVRQKEPHDAFAR*HVGRLT
Trigger: AGTCAGCCTGCCCACATGCCACCGAGCAAACGCATC...GTGAGGCTCCTTTTGACGTACTTTTGACATCAGGCAGGTTTGGGAAGAAACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
3UTR-3UTR GCA 90 bp AAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGGTATTGCTGTGACAGGTAGGCAAGAGTGCTCCTaGCTAAAGAGTATTATATCA +
Preference number: 2 (lower is better)
Translates to: KGASQSQESMVPGIAVTGRQECS*LKSIIS
Trigger: TGATATAATACTCTTTAGGCAGGAGCACTCTTGCCT...ACCTGTCACAGCAATACCTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR-3UTR GCA 90 bp AATCACCACATCATTCCCAACTTGTCACTCATGCTTCAGATGACGAAAATGCCACATCAGGCTCTGTCTTaGAGGAGAGCTCAGGCTGGC +
Preference number: 2 (lower is better)
Translates to: NHHIIPNLSLMLQMTKMPHQALS*RRAQAG
Trigger: GCCAGCCTGAGCTCTCCTGCAAGACAGAGCCTGATG...TGGCATTTTCGTCATCTGAAGCATGAGTGACAAGTTGGGAATGATGTGGTGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR-3UTR GCA 90 bp GTCAAAAGTACGTCAAAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGGTAGAATGCAACCTTCTTaGTTCAGTTTCAAGTCCCTC +
Preference number: 2 (lower is better)
Translates to: VKSTSKGASQSQESMVPGRMQPS*FSFKSL
Trigger: GAGGGACTTGAAACTGAAGCAAGAAGGTTGCATTCT...ACCTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTTTGACGTACTTTTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR-3UTR GCA 90 bp ATGTCAAAAGTACGTCAAAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGTCCCTTGGTGGAGAATaGAACCTTCTTGCTTCAGTT +
Preference number: 2 (lower is better)
Translates to: MSKVRQKEPHSPRRAWSQSLGGE*NLLASV
Trigger: AACTGAAGCAAGAAGGTTGCATTCTCCACCAAGGGA...CTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTTTGACGTACTTTTGACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR-3UTR CCA 90 bp GGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCACAAGGTCTACAGATaGCATTTTCATAGGAAAGAC +
Preference number: 2 (lower is better)
Translates to: GDPTGHRATWQVTSQSFHHKVYR*HFHRKD
Trigger: GTCTTTCCTATGAAAATGCCATCTGTAGACCTTGTG...GTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR-3UTR TCA 90 bp GTCAAAAGTACGTCAAAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGGTGTTAGTGGATCACACTaGGACAGAAAAGTTCCAAAT +
Preference number: 2 (lower is better)
Translates to: VKSTSKGASQSQESMVPGVSGSH*DRKVPN
Trigger: ATTTGGAACTTTTCTGTCTCAGTGTGATCCACTAAC...ACCTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTTTGACGTACTTTTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR-3UTR GCA 90 bp CTTTCACATACACAGGTGCGTGGAGATGCCCACTCCCATAGGGTCCAAAGTGACAGGCAAGAGTGCTCCTaGCTAAAGAGTATTATATCA +
Preference number: 2 (lower is better)
Translates to: LSHTQVRGDAHSHRVQSDRQECS*LKSIIS
Trigger: TGATATAATACTCTTTAGGCAGGAGCACTCTTGCCT...GTCACTTTGGACCCTATGGGAGTGGGCATCTCCACGCACCTGTGTATGTGAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR-3UTR GCA 90 bp CAAGGCAAGGGAAAACACACACAGGGGCATCTACTTGCTGGAAACATGTTGGGATCCCTTGGTGGAGAATaGAACCTTCTTGCTTCAGTT +
Preference number: 2 (lower is better)
Translates to: QGKGKHTQGHLLAGNMLGSLGGE*NLLASV
Trigger: AACTGAAGCAAGAAGGTTGCATTCTCCACCAAGGGA...TCCCAACATGTTTCCAGCAAGTAGATGCCCCTGTGTGTGTTTTCCCTTGCCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR-3UTR GCA 90 bp TTTGTTTCTTCCCAAACCTGCCTGATGTCAAAAGTACGTCAAAAGGAGCCTCACAAAGCAAGATGCGTTTaGTCGGTGGCATGTGGGCAG +
Preference number: 2 (lower is better)
Translates to: FVSSQTCLMSKVRQKEPHKARCV*SVACGQ
Trigger: CTGCCCACATGCCACCGAGCAAACGCATCTTGCTTT...GTGAGGCTCCTTTTGACGTACTTTTGACATCAGGCAGGTTTGGGAAGAAACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
3UTR-3UTR TCA 90 bp TCGACTCTGAGATTCTGTAGAACAGGATGCGTTCGAAGATGTTTCATCAAGAGACATCCCAGTGCTTTGTaGAGCTGTGGTGGGAAGATC +
Preference number: 2 (lower is better)
Translates to: STLRFCRTGCVRRCFIKRHPSAL*SCGGKI
Trigger: GATCTTCCCACCACAGCTTCACAAAGCACTGGGATG...TCTCTTGATGAAACATCTTCGAACGCATCCTGTTCTACAGAATCTCAGAGTCGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644587.1
3UTR-3UTR GCA 90 bp CAAGGCAAGGGAAAACACACACAGGGGCATCTACTTGCTGGAAACATGTTGGGAAGAATGCAACCTTCTTaGTTCAGTTTCAAGTCCCTC +
Preference number: 2 (lower is better)
Translates to: QGKGKHTQGHLLAGNMLGRMQPS*FSFKSL
Trigger: GAGGGACTTGAAACTGAAGCAAGAAGGTTGCATTCT...TCCCAACATGTTTCCAGCAAGTAGATGCCCCTGTGTGTGTTTTCCCTTGCCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR CAA 90 bp AGTGGAAGACTGGCATTTCTACTTAGTTCAGGTAGGTTAACTCCCTaGGTGGAGAATGCAACCTTCTTGCTTCAGTTTCAAGTCCCTCTG +
Preference number: 2 (lower is better)
Translates to: SGRLAFLLSSGRLTP*VENATFLLQFQVPL
Trigger: CAGAGGGACTTGAAACTGAAGCAAGAAGGTTGCATTCTCCACCAAGGGAGTTAACCTACCTGAACTAAGTAGAAATGCCAGTCTTCCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
3UTR-3UTR GCA 90 bp ATTAGGAAGAGACGTTCATGTTCTCTGTACAATACATCCATTTACAGAATCAGCCGCAACCCCACTCCGTaGCACATCAGGCTCTGTCTT +
Preference number: 2 (lower is better)
Translates to: IRKRRSCSLYNTSIYRISRNPTP*HIRLCL
Trigger: AAGACAGAGCCTGATGTGGCACGGAGTGGGGTTGCG...GCTGATTCTGTAAATGGATGTATTGTACAGAGAACATGAACGTCTCTTCCTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR-3UTR GCA 90 bp TTTGTTTCTTCCCAAACCTGCCTGATGTCAAAAGTACGTCAAAAGGAGCCTCACTCCCTTGGTGGAGAATaGAACCTTCTTGCTTCAGTT +
Preference number: 2 (lower is better)
Translates to: FVSSQTCLMSKVRQKEPHSLGGE*NLLASV
Trigger: AACTGAAGCAAGAAGGTTGCATTCTCCACCAAGGGA...GTGAGGCTCCTTTTGACGTACTTTTGACATCAGGCAGGTTTGGGAAGAAACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR-3UTR CCA 90 bp AACTCTGTAATAAGTCGAAATACAAGATATAAGGCAGGAAACAAGGCAAGGGAACCTTGGGCAGCCCAATaGGTTATACCCAGGAAACCC +
Preference number: 2 (lower is better)
Translates to: NSVISRNTRYKAGNKAREPWAAQ*VIPRKP
Trigger: GGGTTTCCTGGGTATAACCCATTGGGCTGCCCAAGG...TTCCCTTGCCTTGTTTCCTGCCTTATATCTTGTATTTCGACTTATTACAGAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR-3UTR CCA 90 bp CAGACGCTTAAGTTGACAACTTGGACTTGGCCAATACTGCATTCTAAATCACCAGGGGTAGTGGAAGACTaGCATTTCTACTTAGTTCAG +
Preference number: 2 (lower is better)
Translates to: QTLKLTTWTWPILHSKSPGVVED*HFYLVQ
Trigger: CTGAACTAAGTAGAAATGCCAGTCTTCCACTACCCC...TGGTGATTTAGAATGCAGTATTGGCCAAGTCCAAGTTGTCAACTTAAGCGTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR-3UTR GCA 90 bp TTTGTTTCTTCCCAAACCTGCCTGATGTCAAAAGTACGTCAAAAGGAGCCTCACAGGCAAGAGTGCTCCTaGCTAAAGAGTATTATATCA +
Preference number: 2 (lower is better)
Translates to: FVSSQTCLMSKVRQKEPHRQECS*LKSIIS
Trigger: TGATATAATACTCTTTAGGCAGGAGCACTCTTGCCT...GTGAGGCTCCTTTTGACGTACTTTTGACATCAGGCAGGTTTGGGAAGAAACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR-3UTR GCA 90 bp AGTTCAGGTAGGTTAACTCCCTTGGTGGAGAATGCAACCTTCTTGCTTCAGTTTAGGCAAGAGTGCTCCTaGCTAAAGAGTATTATATCA +
Preference number: 2 (lower is better)
Translates to: SSGRLTPLVENATFLLQFRQECS*LKSIIS
Trigger: TGATATAATACTCTTTAGGCAGGAGCACTCTTGCCT...AAACTGAAGCAAGAAGGTTGCATTCTCCACCAAGGGAGTTAACCTACCTGAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
3UTR CAA 90 bp GGACTTGGCCAATACTGCATTCTAAATCACCACATCATTCCCAACTaGTCACTCATGCTTCAGATGACGAAAATGCCACATCAGATTAAA +
Preference number: 2 (lower is better)
Translates to: GLGQYCILNHHIIPN*SLMLQMTKMPHQIK
Trigger: TTTAATCTGATGTGGCATTTTCGTCATCTGAAGCATGAGTGACAAGTTGGGAATGATGTGGTGATTTAGAATGCAGTATTGGCCAAGTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
3UTR-3UTR CCA 90 bp ATTAGGAAGAGACGTTCATGTTCTCTGTACAATACATCCATTTACAGAATCAGCCACAAGGTCTACAGATaGCATTTTCATAGGAAAGAC +
Preference number: 2 (lower is better)
Translates to: IRKRRSCSLYNTSIYRISHKVYR*HFHRKD
Trigger: GTCTTTCCTATGAAAATGCCATCTGTAGACCTTGTG...GCTGATTCTGTAAATGGATGTATTGTACAGAGAACATGAACGTCTCTTCCTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR-3UTR TCA 90 bp CAAACCATTAATCCATTAAAAGAGCACAACGAATATCAGAGAAGTGATGCCTATGATGTAAAAGGCCAATaGACAAGATACTATGAAGGA +
Preference number: 2 (lower is better)
Translates to: QTINPLKEHNEYQRSDAYDVKGQ*TRYYEG
Trigger: TCCTTCATAGTATCTTGTTCATTGGCCTTTTACATC...ATAGGCATCACTTCTCTGATATTCGTTGTGCTCTTTTAATGGATTAATGGTTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375689.5
ENST00000542461.5
ENST00000646367.1
3UTR CCA 72 bp GGTGGTGACCCTGGAGCCAGATCTGGAAGGCCTTCCTaGGGGCTGCCCAGGGAACTCACCCATGAATCCAGA +
Preference number: 3 (lower is better)
Translates to: GGDPGARSGRPS*GLPRELTHESR
Trigger: TCTGGATTCATGGGTGAGTTCCCTGGGCAGCCCCCAGGAAGGCCTTCCAGATCTGGCTCCAGGGTCACCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
3UTR TCA 72 bp CACAGTCCCAGGAGAGCATGGTCCCAGGTATTGCTGTaGCAGGTGGTGACCCTGGAGCCAGATCTGGAAGGC +
Preference number: 3 (lower is better)
Translates to: HSPRRAWSQVLL*QVVTLEPDLEG
Trigger: GCCTTCCAGATCTGGCTCCAGGGTCACCACCTGTCACAGCAATACCTGGGACCATGCTCTCCTGGGACTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
3UTR CCA 72 bp GGTCCAGCCGGTGACCCAACAGGGCATCGGGCAACCTaGCAGGTCACAAGTCAATCATTTCACCCTCACGTC +
Preference number: 3 (lower is better)
Translates to: GPAGDPTGHRAT*QVTSQSFHPHV
Trigger: GACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACCGGCTGGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
3UTR-3UTR CAA 90 bp CCAGCAGAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTTCAGGCTGGCTGGCCTaGGGCAGCCCAATGGGTTAT +
Preference number: 3 (lower is better)
Translates to: PAEGRRGLDMFGPLFPVFSGWLA*GSPMGY
Trigger: ATAACCCATTGGGCTGCCCAAGGCCAGCCAGCCTGA...AAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTCTGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR-3UTR CAA 90 bp AAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGGTATTGCTGTGACAGGTTCAGGCTGGCTGGCCTaGGGCAGCCCAATGGGTTAT +
Preference number: 3 (lower is better)
Translates to: KGASQSQESMVPGIAVTGSGWLA*GSPMGY
Trigger: ATAACCCATTGGGCTGCCCAAGGCCAGCCAGCCTGA...ACCTGTCACAGCAATACCTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR CCA 72 bp GTGTCCTCTGGCTCCTCTCCCTCCACTGTAGCTGGATaGCGAGACCACTGCAGGGCATCCTTCTGTAATCCA +
Preference number: 3 (lower is better)
Translates to: VSSGSSPSTVAG*RDHCRASFCNP
Trigger: TGGATTACAGAAGGATGCCCTGCAGTGGTCTCGCCATCCAGCTACAGTGGAGGGAGAGGAGCCAGAGGACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644587.1
3UTR-3UTR CAA 90 bp AGGTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCGGTAGGTTAACTCCCTaGGTGGAGAATGCAACCTTC +
Preference number: 3 (lower is better)
Translates to: RSAGAPAPWWAMPGVTLTGRLTP*VENATF
Trigger: GAAGGTTGCATTCTCCACCAAGGGAGTTAACCTACC...GGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
3UTR-3UTR CAA 90 bp CCAGCCGGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATATTCCCCAACCCCATaGTCCAAGCAGAGCTATTCA +
Preference number: 3 (lower is better)
Translates to: PAGDPTGHRATWQVTSQSYSPTP*SKQSYS
Trigger: TGAATAGCTCTGCTTGGACAATGGGGTTGGGGAATA...TGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACCGGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR GCA 72 bp CCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGTaGTGGCTTCTTTCCTGGCCATCAACTCCCCAAAGT +
Preference number: 3 (lower is better)
Translates to: PWWAMPGVTLTL*WLLSWPSTPQS
Trigger: ACTTTGGGGAGTTGATGGCCAGGAAAGAAGCCAGCACAGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
3UTR GCA 72 bp ACAAGGCAAGGGAAAACACACACAGGGGCATCTACTTaGTGGAAACATGTTGGGAGAGAGGCAGGAGCAGGC +
Preference number: 3 (lower is better)
Translates to: TRQGKTHTGAST*WKHVGREAGAG
Trigger: GCCTGCTCCTGCCTCTCTCCCAACATGTTTCCAGCAAGTAGATGCCCCTGTGTGTGTTTTCCCTTGCCTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
3UTR-3UTR CAA 90 bp AAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGGTATTGCTGTGACAGGTGGTAGGTTAACTCCCTaGGTGGAGAATGCAACCTTC +
Preference number: 3 (lower is better)
Translates to: KGASQSQESMVPGIAVTGGRLTP*VENATF
Trigger: GAAGGTTGCATTCTCCACCAAGGGAGTTAACCTACC...ACCTGTCACAGCAATACCTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR TCA 72 bp AGAACCAAGGTCAAACTTGCTCCGTCAACTGGCAAATaGCTCAACTGTGACCCTGAGGTCAGCAGGTGCACC +
Preference number: 3 (lower is better)
Translates to: RTKVKLAPSTGK*LNCDPEVSRCT
Trigger: GGTGCACCTGCTGACCTCAGGGTCACAGTTGAGTCATTTGCCAGTTGACGGAGCAAGTTTGACCTTGGTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR-3UTR CAA 90 bp GGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACAGCACTCAGTGGTAGGTTAACTCCCTaGGTGGAGAATGCAACCTTC +
Preference number: 3 (lower is better)
Translates to: GRSQVNHFTLTSSSTALSGRLTP*VENATF
Trigger: GAAGGTTGCATTCTCCACCAAGGGAGTTAACCTACC...ACTGAGTGCTGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR-3UTR CAA 90 bp GAGATGCCCACTCCCATAGGGTCCAAAGTGACAGGGAGGATGTCAAGCAGAGGAGAACCAAGGTCAAACTaGCTCCGTCAACTGGCAAAT +
Preference number: 3 (lower is better)
Translates to: EMPTPIGSKVTGRMSSRGEPRSN*LRQLAN
Trigger: ATTTGCCAGTTGACGGAGCAAGTTTGACCTTGGTTC...TCCTCTGCTTGACATCCTCCCTGTCACTTTGGACCCTATGGGAGTGGGCATCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR-3UTR CAA 90 bp CATGGCTTTGTTTCTTCCCAAACCTGCCTGATGTCAAAAGTACGTCAAAAGGAGTCAGGCTGGCTGGCCTaGGGCAGCCCAATGGGTTAT +
Preference number: 3 (lower is better)
Translates to: HGFVSSQTCLMSKVRQKESGWLA*GSPMGY
Trigger: ATAACCCATTGGGCTGCCCAAGGCCAGCCAGCCTGA...CTCCTTTTGACGTACTTTTGACATCAGGCAGGTTTGGGAAGAAACAAAGCCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR TCA 72 bp AGCCTCATGGACCAGATCAGTGTCAAACTGTACCCTTaGGTGTCCCCAAAGGTTCCAGCAGAGGGAAGAAGA +
Preference number: 3 (lower is better)
Translates to: SLMDQISVKLYP*VSPKVPAEGRR
Trigger: TCTTCTTCCCTCTGCTGGAACCTTTGGGGACACTCAAGGGTACAGTTTGACACTGATCTGGTCCATGAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
3UTR GCA 72 bp GGCAGGAGCAGGCATGGCTTTGTTTCTTCCCAAACCTaGCTGATGTCAAAAGTACGTCAAAAGGAGCCTCAC +
Preference number: 3 (lower is better)
Translates to: GRSRHGFVSSQT*LMSKVRQKEPH
Trigger: GTGAGGCTCCTTTTGACGTACTTTTGACATCAGGCAGGTTTGGGAAGAAACAAAGCCATGCCTGCTCCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
3UTR-3UTR CAA 90 bp AGATCAGTGTCAAACTGTACCCTTGAGTGTCCCCAAAGGTTCCAGCAGAGGGAAGGTAGGTTAACTCCCTaGGTGGAGAATGCAACCTTC +
Preference number: 3 (lower is better)
Translates to: RSVSNCTLECPQRFQQREGRLTP*VENATF
Trigger: GAAGGTTGCATTCTCCACCAAGGGAGTTAACCTACC...TTCCCTCTGCTGGAACCTTTGGGGACACTCAAGGGTACAGTTTGACACTGATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR-3UTR CAA 90 bp GATGCAGATTCCACGTGGGCCCCGTTTACCTTCAGAGGAGTCAGGACAACTCGAGTCTTTTTCTTTTGTTaGTTCGCCTGTGAGGAAGCT +
Preference number: 3 (lower is better)
Translates to: DADSTWAPFTFRGVRTTRVFFFC*FACEEA
Trigger: AGCTTCCTCACAGGCGAACAAACAAAAGAAAAAGAC...TCGAGTTGTCCTGACTCCTCTGAAGGTAAACGGGGCCCACGTGGAATCTGCATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000644587.1
3UTR CCA 72 bp GAGGATGTCAAGCAGAGGAATTCACCTGCAAACATCTaGACGGCTGACTCACAAGGTCTACAGATGGCATTT +
Preference number: 3 (lower is better)
Translates to: EDVKQRNSPANI*TADSQGLQMAF
Trigger: AAATGCCATCTGTAGACCTTGTGAGTCAGCCGTCCAGATGTTTGCAGGTGAATTCCTCTGCTTGACATCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR TCA 72 bp CCCCATTGTCCAAGCAGAGCTATTCAAGGTTCCAAATaGTCCTGTGGGTTAGTGGATCACACTGAGACAGAA +
Preference number: 3 (lower is better)
Translates to: PHCPSRAIQGSK*SCGLVDHTETE
Trigger: TTCTGTCTCAGTGTGATCCACTAACCCACAGGATCATTTGGAACCTTGAATAGCTCTGCTTGGACAATGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR TCA 72 bp CAAGCAGAGGAATTCACCTGCAAACATCTGGACGGCTaGCTCACAAGGTCTACAGATGGCATTTTCATAGGA +
Preference number: 3 (lower is better)
Translates to: QAEEFTCKHLDG*LTRSTDGIFIG
Trigger: TCCTATGAAAATGCCATCTGTAGACCTTGTGAGTCAGCCGTCCAGATGTTTGCAGGTGAATTCCTCTGCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR-3UTR CAA 90 bp TTTGTTTCTTCCCAAACCTGCCTGATGTCAAAAGTACGTCAAAAGGAGCCTCACGAACCAAGGTCAAACTaGCTCCGTCAACTGGCAAAT +
Preference number: 3 (lower is better)
Translates to: FVSSQTCLMSKVRQKEPHEPRSN*LRQLAN
Trigger: ATTTGCCAGTTGACGGAGCAAGTTTGACCTTGGTTC...GTGAGGCTCCTTTTGACGTACTTTTGACATCAGGCAGGTTTGGGAAGAAACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR-3UTR CAA 90 bp ATGTCAAAAGTACGTCAAAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGAGAAAAGTTCCAAATTaGCTTCAGCAACAGAACCAA +
Preference number: 3 (lower is better)
Translates to: MSKVRQKEPHSPRRAWSQRKVPN*LQQQNQ
Trigger: TTGGTTCTGTTGCTGAAGCAAATTTGGAACTTTTCT...CTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTTTGACGTACTTTTGACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR-3UTR CAA 90 bp TTTGTTTCTTCCCAAACCTGCCTGATGTCAAAAGTACGTCAAAAGGAGCCTCACTATTCCCCAACCCCATaGTCCAAGCAGAGCTATTCA +
Preference number: 3 (lower is better)
Translates to: FVSSQTCLMSKVRQKEPHYSPTP*SKQSYS
Trigger: TGAATAGCTCTGCTTGGACAATGGGGTTGGGGAATA...GTGAGGCTCCTTTTGACGTACTTTTGACATCAGGCAGGTTTGGGAAGAAACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR-3UTR CAA 90 bp CATGGCTTTGTTTCTTCCCAAACCTGCCTGATGTCAAAAGTACGTCAAAAGGAGGAGAATGCAACCTTCTaGCTTCAGTTTCAAGTCCCT +
Preference number: 3 (lower is better)
Translates to: HGFVSSQTCLMSKVRQKEENATF*LQFQVP
Trigger: AGGGACTTGAAACTGAAGCAAGAAGGTTGCATTCTC...CTCCTTTTGACGTACTTTTGACATCAGGCAGGTTTGGGAAGAAACAAAGCCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR TCA 72 bp CCCTGTTCCCGGTCTTTGGTAAACAGACGCTTAAGTTaGCAACTTGGACTTGGCCAATACTGCATTCTAAAT +
Preference number: 3 (lower is better)
Translates to: PCSRSLVNRRLS*QLGLGQYCILN
Trigger: ATTTAGAATGCAGTATTGGCCAAGTCCAAGTTGTCAACTTAAGCGTCTGTTTACCAAAGACCGGGAACAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
3UTR-3UTR CAA 90 bp GCAAGAACCCTCAACTCTGTAATAAGTCGAAATACAAGATATAAGGCAGGAAACGAGAATGCAACCTTCTaGCTTCAGTTTCAAGTCCCT +
Preference number: 3 (lower is better)
Translates to: ARTLNSVISRNTRYKAGNENATF*LQFQVP
Trigger: AGGGACTTGAAACTGAAGCAAGAAGGTTGCATTCTC...GTTTCCTGCCTTATATCTTGTATTTCGACTTATTACAGAGTTGAGGGTTCTTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR GCA 72 bp GGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTaGTCCTGCCTAAAGAGTATTATATCAATGATATTC +
Preference number: 3 (lower is better)
Translates to: GFSSVNFGGRQE*SCLKSIISMIF
Trigger: GAATATCATTGATATAATACTCTTTAGGCAGGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
3UTR CCA 72 bp TTTGGTAAACAGACGCTTAAGTTGACAACTTGGACTTaGCCAATACTGCATTCTAAATCACCACATCATTCC +
Preference number: 3 (lower is better)
Translates to: FGKQTLKLTTWT*PILHSKSPHHS
Trigger: GGAATGATGTGGTGATTTAGAATGCAGTATTGGCCAAGTCCAAGTTGTCAACTTAAGCGTCTGTTTACCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp GTGACAGGTGGTGACCCTGGAGCCAGATCTGGAAGGCCTTCCTGGGGGCTGCCCAGCCGCTGCTGCTGCTaGACGGGCTGCCGCTCTCGC +
Preference number: 4 (lower is better)
Translates to: VTGGDPGARSGRPSWGLPSRCCC*TGCRSR
Trigger: GCGAGAGCGGCAGCCCGTCCAGCAGCAGCAGCGGCT...GGGCAGCCCCCAGGAAGGCCTTCCAGATCTGGCTCCAGGGTCACCACCTGTCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000651418.1
CDS-3UTR GCA 90 bp GTGACAGGTGGTGACCCTGGAGCCAGATCTGGAAGGCCTTCCTGGGGGCTGCCCTGCTGCTGGACGGGCTaGCGCTCTCGCCATCGGCGT +
Preference number: 4 (lower is better)
Translates to: VTGGDPGARSGRPSWGLPCCWTG*RSRHRR
Trigger: ACGCCGATGGCGAGAGCGGCAGCCCGTCCAGCAGCA...GGGCAGCCCCCAGGAAGGCCTTCCAGATCTGGCTCCAGGGTCACCACCTGTCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000651418.1
CDS-3UTR CCA 90 bp CAGGTCCAGCCGGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAGCGGGGCAGGGTCCTaGGTGACCTCGGCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: QVQPVTQQGIGQPGRSQVSGAGS*VTSAWP
Trigger: TGGCCAGGCCGAGGTCACCCAGGACCCTGCCCCGCT...GACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACCGGCTGGACCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000651418.1
CDS-3UTR TCA 90 bp GTGACAGGTGGTGACCCTGGAGCCAGATCTGGAAGGCCTTCCTGGGGGCTGCCCTCTCTATGGCAGTGGTaGCCTCTCGCCCCTCGGACC +
Preference number: 4 (lower is better)
Translates to: VTGGDPGARSGRPSWGLPSLWQW*PLAPRT
Trigger: GGTCCGAGGGGCGAGAGGTCACCACTGCCATAGAGA...GGGCAGCCCCCAGGAAGGCCTTCCAGATCTGGCTCCAGGGTCACCACCTGTCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GGGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGACGCGGGACCCCGCTaGCCAGAGTGGGAGGAGCCG +
Preference number: 4 (lower is better)
Translates to: GQPNGLYPGNPSSKTRRVDAGPR*PEWEEP
Trigger: CGGCTCCTCCCACTCTGGGCAGCGGGGTCCCGCGTC...GACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646985.1
CDS-3UTR CCA 90 bp GCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGTGCAGCCGCTGCTGCTGCTaGACGGGCTGCCGCTCTCGC +
Preference number: 4 (lower is better)
Translates to: AGAPAPWWAMPGVTLTLCSRCCC*TGCRSR
Trigger: GCGAGAGCGGCAGCCCGTCCAGCAGCAGCAGCGGCT...GCACAGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
CDS-3UTR CCA 90 bp GCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGTGCCACCTCCCTCATCGGTaGCCCCGCCGCCACCTCCAC +
Preference number: 4 (lower is better)
Translates to: AGAPAPWWAMPGVTLTLCHLPHR*PRRHLH
Trigger: GTGGAGGTGGCGGCGGGGCCACCGATGAGGGAGGTG...GCACAGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp GTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGGGCAGGGTCCTGGGTaGCCTCGGCCTGGCCACGAA +
Preference number: 4 (lower is better)
Translates to: VSRCTSPLVGNARSYFNPGQGPG*PRPGHE
Trigger: TTCGTGGCCAGGCCGAGGTCACCCAGGACCCTGCCC...AGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
CDS-3UTR CCA 90 bp GGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGAGCGGGGCAGGGTCCTaGGTGACCTCGGCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: GSPMGYTQETPPARPEGSSGAGS*VTSAWP
Trigger: TGGCCAGGCCGAGGTCACCCAGGACCCTGCCCCGCT...CGACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
CDS-3UTR CCA 90 bp AGGTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCAGCGGGGCAGGGTCCTaGGTGACCTCGGCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: RSAGAPAPWWAMPGVTLTSGAGS*VTSAWP
Trigger: TGGCCAGGCCGAGGTCACCCAGGACCCTGCCCCGCT...GGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGACCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
CDS-3UTR CCA 90 bp AGGTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCTGCTCGGGCCTCCCCTaGGCTCAGGGTGGCCACAGG +
Preference number: 4 (lower is better)
Translates to: RSAGAPAPWWAMPGVTLTCSGLP*AQGGHR
Trigger: CCTGTGGCCACCCTGAGCCCAGGGGAGGCCCGAGCA...GGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGACCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp CAGGTCCAGCCGGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCGGAAGGTCCGAGAGTTaGTCAGGGCACGGAGGTTGG +
Preference number: 4 (lower is better)
Translates to: QVQPVTQQGIGQPGRSQVGRSES*SGHGGW
Trigger: CCAACCTCCGTGCCCTGATCAACTCTCGGACCTTCC...GACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACCGGCTGGACCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR TCA 90 bp CCAGCCGGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCAGCTCCAGAGGCTCACTaGGCCCCTTCCCTGGCTCTC +
Preference number: 4 (lower is better)
Translates to: PAGDPTGHRATWQVTSQSAPEAH*APSLAL
Trigger: GAGAGCCAGGGAAGGGGCTCAGTGAGCCTCTGGAGC...TGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACCGGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp AGGTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCTGCTGCTGGACGGGCTaGCGCTCTCGCCATCGGCGT +
Preference number: 4 (lower is better)
Translates to: RSAGAPAPWWAMPGVTLTCCWTG*RSRHRR
Trigger: ACGCCGATGGCGAGAGCGGCAGCCCGTCCAGCAGCA...GGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGACCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
CDS-3UTR GCA 90 bp GGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACACGGCGCCCGGGTGCGTaGGTGTCTGCCGTGGGTGTG +
Preference number: 4 (lower is better)
Translates to: GQPGRSQVNHFTLTSSSTRRPGA*VSAVGV
Trigger: CACACCCACGGCAGACACGCACGCACCCGGGCGCCG...TGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375687.10
ENST00000613218.4
ENST00000651418.1
CDS-3UTR CCA 90 bp GGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGTGTCTGCGAGGGTCCTaGCGCCAGTCCAACCCCGGC +
Preference number: 4 (lower is better)
Translates to: GSPMGYTQETPPARPEGSCLRGS*RQSNPG
Trigger: GCCGGGGTTGGACTGGCGCCAGGACCCTCGCAGACA...CGACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CAGGTCCAGCCGGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCCTCCGATGGCAGTGGTaGCCGCCTCTCTATGGCAGT +
Preference number: 4 (lower is better)
Translates to: QVQPVTQQGIGQPGRSQVLRWQW*PPLYGS
Trigger: ACTGCCATAGAGAGGCGGCCACCACTGCCATCGGAG...GACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACCGGCTGGACCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGTGCCCCCTCCGATGGCAGTaGTGGCCGCCTCTCTATGGC +
Preference number: 4 (lower is better)
Translates to: AGAPAPWWAMPGVTLTLCPLRWQ*WPPLYG
Trigger: GCCATAGAGAGGCGGCCACCACTGCCATCGGAGGGG...GCACAGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CCAGCAGAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTCACCTCCCTCATCGGTaGCCCCGCCGCCACCTCCAC +
Preference number: 4 (lower is better)
Translates to: PAEGRRGLDMFGPLFPVFHLPHR*PRRHLH
Trigger: GTGGAGGTGGCGGCGGGGCCACCGATGAGGGAGGTG...AAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTCTGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGCACCTCCCTCATCGGTaGCCCCGCCGCCACCTCCAC +
Preference number: 4 (lower is better)
Translates to: QGIGQPGRSQVNHFTLTSHLPHR*PRRHLH
Trigger: GTGGAGGTGGCGGCGGGGCCACCGATGAGGGAGGTG...CGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGGGCAAGGCCTGGCATaGCTGGTCCCCAGTGGGAGC +
Preference number: 4 (lower is better)
Translates to: VSRCTSPLVGNARSYFNPGQGLA*LVPSGS
Trigger: GCTCCCACTGGGGACCAGCCATGCCAGGCCTTGCCC...AGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp TCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGTCGGGTCCGCAGGCCTaGGGCGCTGAAGGGTTGCAG +
Preference number: 4 (lower is better)
Translates to: SAGAPAPWWAMPGVTLTLSGPQA*GAEGLQ
Trigger: CTGCAACCCTTCAGCGCCCCAGGCCTGCGGACCCGA...CAGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp AGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCCAAGTGACAGAGGGCTTTAGCAGCAGGTCCAGCCGGTaGCCCAACAGGGCATCGGGC +
Preference number: 4 (lower is better)
Translates to: RKPLQQDQKGRQVTEGFSSRSSR*PNRASG
Trigger: GCCCGATGCCCTGTTGGGTCACCGGCTGGACCTGCT...GCTAAAGCCCTCTGTCACTTGGCGACCCTTCTGGTCTTGCTGGAGGGGTTTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp CCAGCAGAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTTGCTGCTGGACGGGCTaGCGCTCTCGCCATCGGCGT +
Preference number: 4 (lower is better)
Translates to: PAEGRRGLDMFGPLFPVFCCWTG*RSRHRR
Trigger: ACGCCGATGGCGAGAGCGGCAGCCCGTCCAGCAGCA...AAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTCTGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000651418.1
CDS-3UTR GCA 90 bp GACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTGGGCCAGAGAGCCGCTaGTGCTGCTGGACGGGCTGC +
Preference number: 4 (lower is better)
Translates to: DPTGHRATWQVTSQSFHPGPESR*CCWTGC
Trigger: GCAGCCCGTCCAGCAGCAGCAGCGGCTCTCTGGCCC...AGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000651418.1
CDS-3UTR GCA 90 bp CAGAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTAGGGCCAGAGAGCCGCTaGTGCTGCTGGACGGGCTGC +
Preference number: 4 (lower is better)
Translates to: QREEEDWTCLGPCSRSLVGPESR*CCWTGC
Trigger: GCAGCCCGTCCAGCAGCAGCAGCGGCTCTCTGGCCC...TACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000651418.1
CDS-3UTR GCA 90 bp GCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGTGCCTCCAGGTCGGGTGCTaGAGAGGATGTGCCTGGCAG +
Preference number: 4 (lower is better)
Translates to: AGAPAPWWAMPGVTLTLCLQVGC*RGCAWQ
Trigger: CTGCCAGGCACATCCTCTGCAGCACCCGACCTGGAG...GCACAGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGTGCCACTGCTGCTGCCTCTaGCACCTCCCTCATCGGTGG +
Preference number: 4 (lower is better)
Translates to: AGAPAPWWAMPGVTLTLCHCCCL*HLPHRW
Trigger: CCACCGATGAGGGAGGTGGCAGAGGCAGCAGCAGTG...GCACAGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp CAGGTCCAGCCGGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCCGCAACCCCACTCCGTaGCACATCAGGCTCTGTCTT +
Preference number: 4 (lower is better)
Translates to: QVQPVTQQGIGQPGRSQVRNPTP*HIRLCL
Trigger: AAGACAGAGCCTGATGTGGCACGGAGTGGGGTTGCG...GACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACCGGCTGGACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACAGCGGGGCAGGGTCCTaGGTGACCTCGGCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: GDPTGHRATWQVTSQSFHSGAGS*VTSAWP
Trigger: TGGCCAGGCCGAGGTCACCCAGGACCCTGCCCCGCT...GTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000651418.1
CDS-3UTR CCA 90 bp GCCTTGGGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGCAAGGCCTGGCATaGCTGGTCCCCAGTGGGAGC +
Preference number: 4 (lower is better)
Translates to: ALGSPMGYTQETPPARPEGQGLA*LVPSGS
Trigger: GCTCCCACTGGGGACCAGCCATGCCAGGCCTTGCCC...TTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCCCAAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CCAGCAGAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGGCAAGGCCTGGCATaGCTGGTCCCCAGTGGGAGC +
Preference number: 4 (lower is better)
Translates to: PAEGRRGLDMFGPLFPVFGQGLA*LVPSGS
Trigger: GCTCCCACTGGGGACCAGCCATGCCAGGCCTTGCCC...AAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTCTGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CAGGTCCAGCCGGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCGCAATGCAGGAGGGGTaGGAGCAGCTTTCTCCCACT +
Preference number: 4 (lower is better)
Translates to: QVQPVTQQGIGQPGRSQVAMQEG*EQLSPT
Trigger: AGTGGGAGAAAGCTGCTCCCACCCCTCCTGCATTGC...GACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACCGGCTGGACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp GTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTTCTCTATGGCAGTGGTaGCCTCTCGCCCCTCGGACC +
Preference number: 4 (lower is better)
Translates to: VSRCTSPLVGNARSYFNPSLWQW*PLAPRT
Trigger: GGTCCGAGGGGCGAGAGGTCACCACTGCCATAGAGA...AGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp AGGTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCTCTCTATGGCAGTGGTaGCCTCTCGCCCCTCGGACC +
Preference number: 4 (lower is better)
Translates to: RSAGAPAPWWAMPGVTLTSLWQW*PLAPRT
Trigger: GGTCCGAGGGGCGAGAGGTCACCACTGCCATAGAGA...GGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGACCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp AGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCCAAGTGACAGAGGGCTTTAGCGCAGGCCTGGGGCGCTaGAGGGTTGCAGCCACATTC +
Preference number: 4 (lower is better)
Translates to: RKPLQQDQKGRQVTEGFSAGLGR*RVAATF
Trigger: GAATGTGGCTGCAACCCTTCAGCGCCCCAGGCCTGC...GCTAAAGCCCTCTGTCACTTGGCGACCCTTCTGGTCTTGCTGGAGGGGTTTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp GCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCCAAGCAGGCCTGGGGCGCTaGAGGGTTGCAGCCACATTC +
Preference number: 4 (lower is better)
Translates to: AQWVIPRKPLQQDQKGRQAGLGR*RVAATF
Trigger: GAATGTGGCTGCAACCCTTCAGCGCCCCAGGCCTGC...TTGGCGACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp GCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGTGCGGCATCCCTTCCAAGTaGCCCACCAGTTCCAGGGGA +
Preference number: 4 (lower is better)
Translates to: AGAPAPWWAMPGVTLTLCGIPSK*PTSSRG
Trigger: TCCCCTGGAACTGGTGGGTCACTTGGAAGGGATGCC...GCACAGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp CAGAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTAGCTCTGCTGAGGGACTaGGACAGGACCGACGGCGGG +
Preference number: 4 (lower is better)
Translates to: QREEEDWTCLGPCSRSLVALLRD*DRTDGG
Trigger: CCCGCCGTCGGTCCTGTCTCAGTCCCTCAGCAGAGC...TACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375687.10
ENST00000613218.4
ENST00000651418.1
CDS-3UTR TCA 90 bp AGGTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCGCTTTCCCGCTCTGCTaGGGGACTGAGACAGGACCG +
Preference number: 4 (lower is better)
Translates to: RSAGAPAPWWAMPGVTLTAFPLC*GTETGP
Trigger: CGGTCCTGTCTCAGTCCCTCAGCAGAGCGGGAAAGC...GGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGACCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
CDS-3UTR TCA 90 bp GCCCCGTTTACCTTCAGAGGAGTCAGGACAACTCGAGGCAGCATCACCCCAGTCGCTTTCCCGCTCTGCTaGGGGACTGAGACAGGACCG +
Preference number: 4 (lower is better)
Translates to: APFTFRGVRTTRGSITPVAFPLC*GTETGP
Trigger: CGGTCCTGTCTCAGTCCCTCAGCAGAGCGGGAAAGC...GACTGGGGTGATGCTGCCTCGAGTTGTCCTGACTCCTCTGAAGGTAAACGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000644587.1
CDS-3UTR GCA 90 bp GGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACATGCTGCTGGACGGGCTaGCGCTCTCGCCATCGGCGT +
Preference number: 4 (lower is better)
Translates to: GQPGRSQVNHFTLTSSSTCCWTG*RSRHRR
Trigger: ACGCCGATGGCGAGAGCGGCAGCCCGTCCAGCAGCA...TGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000651418.1
CDS-3UTR GCA 90 bp AGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTAAACGGGCCAGAGAGCCGCTaGTGCTGCTGGACGGGCTGC +
Preference number: 4 (lower is better)
Translates to: REEEDWTCLGPCSRSLVNGPESR*CCWTGC
Trigger: GCAGCCCGTCCAGCAGCAGCAGCGGCTCTCTGGCCC...GTTTACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000651418.1
CDS-3UTR GCA 90 bp CTTTCACATACACAGGTGCGTGGAGATGCCCACTCCCATAGGGTCCAAAGTGACGGGCCAGAGAGCCGCTaGTGCTGCTGGACGGGCTGC +
Preference number: 4 (lower is better)
Translates to: LSHTQVRGDAHSHRVQSDGPESR*CCWTGC
Trigger: GCAGCCCGTCCAGCAGCAGCAGCGGCTCTCTGGCCC...GTCACTTTGGACCCTATGGGAGTGGGCATCTCCACGCACCTGTGTATGTGAAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
CDS-3UTR GCA 90 bp CCAGCCGGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCAGGGACTGCTCAGCCCTaGTGGGTCAGTCTTAGCCTC +
Preference number: 4 (lower is better)
Translates to: PAGDPTGHRATWQVTSQSGTAQP*WVSLSL
Trigger: GAGGCTAAGACTGACCCAGCAGGGCTGAGCAGTCCC...TGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACCGGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR GCA 90 bp CCAGCCGGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCACTCGCCCCTCGGACCTaGAGAGCACGGGCTTTAATG +
Preference number: 4 (lower is better)
Translates to: PAGDPTGHRATWQVTSQSLAPRT*RARALM
Trigger: CATTAAAGCCCGTGCTCTGCAGGTCCGAGGGGCGAG...TGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACCGGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GGGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGGGGCGCTGAAGGGTTaGAGCCACATTCCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: GQPNGLYPGNPSSKTRRVGALKG*SHIPRA
Trigger: GGCTCTGGGAATGTGGCTGCAACCCTTCAGCGCCCC...GACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGGGGCGCTGAAGGGTTaGAGCCACATTCCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: VSRCTSPLVGNARSYFNPGALKG*SHIPRA
Trigger: GGCTCTGGGAATGTGGCTGCAACCCTTCAGCGCCCC...AGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GTGACAGGTGGTGACCCTGGAGCCAGATCTGGAAGGCCTTCCTGGGGGCTGCCCGATGCAGATTCCACGTaGGCCCCGTTTACCTTCAGA +
Preference number: 4 (lower is better)
Translates to: VTGGDPGARSGRPSWGLPDADST*APFTFR
Trigger: TCTGAAGGTAAACGGGGCCCACGTGGAATCTGCATC...GGGCAGCCCCCAGGAAGGCCTTCCAGATCTGGCTCCAGGGTCACCACCTGTCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp GGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCTCTCGCCATCGGCGTaGCAGCCCGAGAACCCTGAT +
Preference number: 4 (lower is better)
Translates to: GSPMGYTQETPPARPEGSLSPSA*QPENPD
Trigger: ATCAGGGTTCTCGGGCTGCCACGCCGATGGCGAGAG...CGACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
CDS-3UTR CCA 90 bp GTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTCTCTCGCCATCGGCGTaGCAGCCCGAGAACCCTGAT +
Preference number: 4 (lower is better)
Translates to: VSRCTSPLVGNARSYFNPLSPSA*QPENPD
Trigger: ATCAGGGTTCTCGGGCTGCCACGCCGATGGCGAGAG...AGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
CDS-3UTR CCA 90 bp AGGTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCTGGGTGACCTCGGCCTaGCCACGAATAGCAGCGCTG +
Preference number: 4 (lower is better)
Translates to: RSAGAPAPWWAMPGVTLTWVTSA*PRIAAL
Trigger: CAGCGCTGCTATTCGTGGCCAGGCCGAGGTCACCCA...GGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGACCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
CDS-3UTR CCA 90 bp GGGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCTGGGTGACCTCGGCCTaGCCACGAATAGCAGCGCTG +
Preference number: 4 (lower is better)
Translates to: GQPNGLYPGNPSSKTRRVWVTSA*PRIAAL
Trigger: CAGCGCTGCTATTCGTGGCCAGGCCGAGGTCACCCA...GACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
CDS-3UTR CCA 90 bp GTGACAGGTGGTGACCCTGGAGCCAGATCTGGAAGGCCTTCCTGGGGGCTGCCCGCTAGGAATTCTGTCTaGAGATGCAGAGGCACGTGC +
Preference number: 4 (lower is better)
Translates to: VTGGDPGARSGRPSWGLPARNSV*RCRGTC
Trigger: GCACGTGCCTCTGCATCTCCAGACAGAATTCCTAGC...GGGCAGCCCCCAGGAAGGCCTTCCAGATCTGGCTCCAGGGTCACCACCTGTCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp GACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTTGTCTGCGAGGGTCCTaGCGCCAGTCCAACCCCGGC +
Preference number: 4 (lower is better)
Translates to: DPTGHRATWQVTSQSFHPCLRGS*RQSNPG
Trigger: GCCGGGGTTGGACTGGCGCCAGGACCCTCGCAGACA...AGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp GGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACATGTCTGCGAGGGTCCTaGCGCCAGTCCAACCCCGGC +
Preference number: 4 (lower is better)
Translates to: GQPGRSQVNHFTLTSSSTCLRGS*RQSNPG
Trigger: GCCGGGGTTGGACTGGCGCCAGGACCCTCGCAGACA...TGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp GCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGTGCCTCCGATGGCAGTGGTaGCCGCCTCTCTATGGCAGT +
Preference number: 4 (lower is better)
Translates to: AGAPAPWWAMPGVTLTLCLRWQW*PPLYGS
Trigger: ACTGCCATAGAGAGGCGGCCACCACTGCCATCGGAG...GCACAGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp AGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCCAAGTGACAGAGGGCTTTAGCCCCCTCCGATGGCAGTaGTGGCCGCCTCTCTATGGC +
Preference number: 4 (lower is better)
Translates to: RKPLQQDQKGRQVTEGFSPLRWQ*WPPLYG
Trigger: GCCATAGAGAGGCGGCCACCACTGCCATCGGAGGGG...GCTAAAGCCCTCTGTCACTTGGCGACCCTTCTGGTCTTGCTGGAGGGGTTTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTAAATGCTCGGGCCTCCCCTaGGCTCAGGGTGGCCACAGG +
Preference number: 4 (lower is better)
Translates to: EGRRGLDMFGPLFPVFGKCSGLP*AQGGHR
Trigger: CCTGTGGCCACCCTGAGCCCAGGGGAGGCCCGAGCA...TTTACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CCAGCCGGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCAGGAGCAACGGGGAGTTaGGAGGCATCTCCTAGCCCA +
Preference number: 4 (lower is better)
Translates to: PAGDPTGHRATWQVTSQSGATGS*EASPSP
Trigger: TGGGCTAGGAGATGCCTCCCAACTCCCCGTTGCTCC...TGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACCGGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CTTCCTGGGGGCTGCCCAGGGAACTCACCCATGAATCCAGAAGCACTTAACACTGGGCAAGGCCTGGCATaGCTGGTCCCCAGTGGGAGC +
Preference number: 4 (lower is better)
Translates to: LPGGCPGNSPMNPEALNTGQGLA*LVPSGS
Trigger: GCTCCCACTGGGGACCAGCCATGCCAGGCCTTGCCC...AGTGTTAAGTGCTTCTGGATTCATGGGTGAGTTCCCTGGGCAGCCCCCAGGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTAGTAGGGGCAAGGCCTaGCATGGCTGGTCCCCAGTG +
Preference number: 4 (lower is better)
Translates to: VSRCTSPLVGNARSYFNPSRGKA*HGWSPV
Trigger: CACTGGGGACCAGCCATGCCAGGCCTTGCCCCTACT...AGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp TCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGAGTAGGGGCAAGGCCTaGCATGGCTGGTCCCCAGTG +
Preference number: 4 (lower is better)
Translates to: SAGAPAPWWAMPGVTLTLSRGKA*HGWSPV
Trigger: CACTGGGGACCAGCCATGCCAGGCCTTGCCCCTACT...CAGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CAGAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTATCGGGTCCGCAGGCCTaGGGCGCTGAAGGGTTGCAG +
Preference number: 4 (lower is better)
Translates to: QREEEDWTCLGPCSRSLVSGPQA*GAEGLQ
Trigger: CTGCAACCCTTCAGCGCCCCAGGCCTGCGGACCCGA...TACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp TCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGAGAGCTCAGGCTGGCTaGCCTTGGGCAGCCCAATGG +
Preference number: 4 (lower is better)
Translates to: SAGAPAPWWAMPGVTLTLRAQAG*PWAAQW
Trigger: CCATTGGGCTGCCCAAGGCCAGCCAGCCTGAGCTCT...CAGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGTGCGCACCAGCCCCCTGGTaGGCAATGCCAGGAGTTACT +
Preference number: 4 (lower is better)
Translates to: AGAPAPWWAMPGVTLTLCAPAPW*AMPGVT
Trigger: AGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGC...GCACAGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GTGACAGGTGGTGACCCTGGAGCCAGATCTGGAAGGCCTTCCTGGGGGCTGCCCCTCTGGGCAGCCTCATaGACCAGATCAGTGTCAAAC +
Preference number: 4 (lower is better)
Translates to: VTGGDPGARSGRPSWGLPLWAAS*TRSVSN
Trigger: GTTTGACACTGATCTGGTCCATGAGGCTGCCCAGAG...GGGCAGCCCCCAGGAAGGCCTTCCAGATCTGGCTCCAGGGTCACCACCTGTCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR TCA 90 bp TGTAGGAGGAGAGATGTGAAAAGCAAGATGCGTTTGCTCGGTGGCATGTGGGCAGGGCAGGGTCCTGGGTaGCCTCGGCCTGGCCACGAA +
Preference number: 4 (lower is better)
Translates to: CRRRDVKSKMRLLGGMWAGQGPG*PRPGHE
Trigger: TTCGTGGCCAGGCCGAGGTCACCCAGGACCCTGCCC...TGCCCACATGCCACCGAGCAAACGCATCTTGCTTTTCACATCTCTCCTCCTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000651418.1
CDS-3UTR TCA 90 bp ATGTCAAAAGTACGTCAAAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGGGGCAGGGTCCTGGGTaGCCTCGGCCTGGCCACGAA +
Preference number: 4 (lower is better)
Translates to: MSKVRQKEPHSPRRAWSQGQGPG*PRPGHE
Trigger: TTCGTGGCCAGGCCGAGGTCACCCAGGACCCTGCCC...CTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTTTGACGTACTTTTGACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000651418.1
CDS-3UTR TCA 90 bp AGGTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCGGAAGGTCCGAGAGTTaGTCAGGGCACGGAGGTTGG +
Preference number: 4 (lower is better)
Translates to: RSAGAPAPWWAMPGVTLTGRSES*SGHGGW
Trigger: CCAACCTCCGTGCCCTGATCAACTCTCGGACCTTCC...GGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp AGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCCAAGTGACAGAGGGCTTTAGCTCTCTATGGCAGTGGTaGCCTCTCGCCCCTCGGACC +
Preference number: 4 (lower is better)
Translates to: RKPLQQDQKGRQVTEGFSSLWQW*PLAPRT
Trigger: GGTCCGAGGGGCGAGAGGTCACCACTGCCATAGAGA...GCTAAAGCCCTCTGTCACTTGGCGACCCTTCTGGTCTTGCTGGAGGGGTTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp GGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACGCAGGCCTGGGGCGCTaGAGGGTTGCAGCCACATTC +
Preference number: 4 (lower is better)
Translates to: GDPTGHRATWQVTSQSFHAGLGR*RVAATF
Trigger: GAATGTGGCTGCAACCCTTCAGCGCCCCAGGCCTGC...GTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp GGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACAGCAGGCCTGGGGCGCTaGAGGGTTGCAGCCACATTC +
Preference number: 4 (lower is better)
Translates to: GQPGRSQVNHFTLTSSSTAGLGR*RVAATF
Trigger: GAATGTGGCTGCAACCCTTCAGCGCCCCAGGCCTGC...TGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp GGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGGGCATCCCTTCCAAGTaGCCCACCAGTTCCAGGGGA +
Preference number: 4 (lower is better)
Translates to: GSPMGYTQETPPARPEGSGIPSK*PTSSRG
Trigger: TCCCCTGGAACTGGTGGGTCACTTGGAAGGGATGCC...CGACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp CTTTCACATACACAGGTGCGTGGAGATGCCCACTCCCATAGGGTCCAAAGTGACAGCAGGTCCAGCCGGTaGCCCAACAGGGCATCGGGC +
Preference number: 4 (lower is better)
Translates to: LSHTQVRGDAHSHRVQSDSRSSR*PNRASG
Trigger: GCCCGATGCCCTGTTGGGTCACCGGCTGGACCTGCT...GTCACTTTGGACCCTATGGGAGTGGGCATCTCCACGCACCTGTGTATGTGAAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp GAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTAAAGCTCTGCTGAGGGACTaGGACAGGACCGACGGCGGG +
Preference number: 4 (lower is better)
Translates to: EGRRGLDMFGPLFPVFGKALLRD*DRTDGG
Trigger: CCCGCCGTCGGTCCTGTCTCAGTCCCTCAGCAGAGC...TTTACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375687.10
ENST00000613218.4
ENST00000651418.1
CDS-3UTR GCA 90 bp GCCTTGGGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAACTGGCAGATGGGGACTaGTCAGCCCTGCTGGGTCAG +
Preference number: 4 (lower is better)
Translates to: ALGSPMGYTQETPPARPELADGD*SALLGQ
Trigger: CTGACCCAGCAGGGCTGAGCAGTCCCCATCTGCCAG...TTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCCCAAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCCAAACCCTCCAGGTCGGGTaGTGCAGAGGATGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: AQWVIPRKPLQQDQKGRQTLQVG*CRGCAW
Trigger: CCAGGCACATCCTCTGCAGCACCCGACCTGGAGGGT...TTGGCGACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp AGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCCAAGTGACAGAGGGCTTTAGCACCCTCCAGGTCGGGTaGTGCAGAGGATGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: RKPLQQDQKGRQVTEGFSTLQVG*CRGCAW
Trigger: CCAGGCACATCCTCTGCAGCACCCGACCTGGAGGGT...GCTAAAGCCCTCTGTCACTTGGCGACCCTTCTGGTCTTGCTGGAGGGGTTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp AGGTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTCGCCCCTCGGACCTaGAGAGCACGGGCTTTAATG +
Preference number: 4 (lower is better)
Translates to: RSAGAPAPWWAMPGVTLTLAPRT*RARALM
Trigger: CATTAAAGCCCGTGCTCTGCAGGTCCGAGGGGCGAG...GGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GTGACAGGTGGTGACCCTGGAGCCAGATCTGGAAGGCCTTCCTGGGGGCTGCCCCTACCCTGCAGCAACTaGATCACAAGTGGGTTAGTG +
Preference number: 4 (lower is better)
Translates to: VTGGDPGARSGRPSWGLPLPCSN*ITSGLV
Trigger: CACTAACCCACTTGTGATGCAGTTGCTGCAGGGTAG...GGGCAGCCCCCAGGAAGGCCTTCCAGATCTGGCTCCAGGGTCACCACCTGTCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp AGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCCAAGTGACAGAGGGCTTTAGCGGGGCGCTGAAGGGTTaGAGCCACATTCCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: RKPLQQDQKGRQVTEGFSGALKG*SHIPRA
Trigger: GGCTCTGGGAATGTGGCTGCAACCCTTCAGCGCCCC...GCTAAAGCCCTCTGTCACTTGGCGACCCTTCTGGTCTTGCTGGAGGGGTTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp CCAGCAGAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGGGCGCTGAAGGGTTaGAGCCACATTCCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: PAEGRRGLDMFGPLFPVFGALKG*SHIPRA
Trigger: GGCTCTGGGAATGTGGCTGCAACCCTTCAGCGCCCC...AAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTCTGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp CAGAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTAGGCCTTCCTGGGGGCTaGCCAGGGAACTCACCCATG +
Preference number: 4 (lower is better)
Translates to: QREEEDWTCLGPCSRSLVGLPGG*PGNSPM
Trigger: CATGGGTGAGTTCCCTGGGCAGCCCCCAGGAAGGCC...TACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR GCA 90 bp GACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTGGCCTTCCTGGGGGCTaGCCAGGGAACTCACCCATG +
Preference number: 4 (lower is better)
Translates to: DPTGHRATWQVTSQSFHPGLPGG*PGNSPM
Trigger: CATGGGTGAGTTCCCTGGGCAGCCCCCAGGAAGGCC...AGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR GCA 90 bp AAAAGTACGTCAAAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGGTATTCGGCGCCCGGGTGCGTaGGTGTCTGCCGTGGGTGTG +
Preference number: 4 (lower is better)
Translates to: KSTSKGASQSQESMVPGIRRPGA*VSAVGV
Trigger: CACACCCACGGCAGACACGCACGCACCCGGGCGCCG...AATACCTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTTTGACGTACTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375687.10
ENST00000613218.4
ENST00000651418.1
CDS-3UTR GCA 90 bp ACCTGTAATCCATCCCAGTGCTTTGTGAAGCTGTGGTGGGAAGATCACTTGAGGGACGCGGGACCCCGCTaGCCAGAGTGGGAGGAGCCG +
Preference number: 4 (lower is better)
Translates to: TCNPSQCFVKLWWEDHLRDAGPR*PEWEEP
Trigger: CGGCTCCTCCCACTCTGGGCAGCGGGGTCCCGCGTC...CCTCAAGTGATCTTCCCACCACAGCTTCACAAAGCACTGGGATGGATTACAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000645035.1
ENST00000649901.1
CDS-3UTR GCA 90 bp TGTAATCCATCCCAGTGCTTTGTGAAGCTGTGGTGGGAAGATCACTTGAGGCCAGACGCGGGACCCCGCTaGCCAGAGTGGGAGGAGCCG +
Preference number: 4 (lower is better)
Translates to: CNPSQCFVKLWWEDHLRPDAGPR*PEWEEP
Trigger: CGGCTCCTCCCACTCTGGGCAGCGGGGTCCCGCGTC...TGGCCTCAAGTGATCTTCCCACCACAGCTTCACAAAGCACTGGGATGGATTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000645035.1
ENST00000649901.1
CDS-3UTR CCA 90 bp TGGCTCCTCTCCCTCCACTGTAGCTGGATGGCGAGACCACTGCAGGGCATCCTTTCCCTCCACTGTAGCTaGATGGCGAGACCACTGCAG +
Preference number: 4 (lower is better)
Translates to: WLLSLHCSWMARPLQGILSLHCS*MARPLQ
Trigger: CTGCAGTGGTCTCGCCATCCAGCTACAGTGGAGGGA...AAGGATGCCCTGCAGTGGTCTCGCCATCCAGCTACAGTGGAGGGAGAGGAGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644587.1
CDS-3UTR CCA 90 bp GCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGTGCATCAGCCGTGTCCTCTaGCTCCTCTCCCTCCACTGT +
Preference number: 4 (lower is better)
Translates to: AGAPAPWWAMPGVTLTLCISRVL*LLSLHC
Trigger: ACAGTGGAGGGAGAGGAGCCAGAGGACACGGCTGAT...GCACAGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp ATGTCAAAAGTACGTCAAAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGAGCCGCTGCTGCTGCTaGACGGGCTGCCGCTCTCGC +
Preference number: 4 (lower is better)
Translates to: MSKVRQKEPHSPRRAWSQSRCCC*TGCRSR
Trigger: GCGAGAGCGGCAGCCCGTCCAGCAGCAGCAGCGGCT...CTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTTTGACGTACTTTTGACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000651418.1
CDS-3UTR CCA 90 bp GGGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCTCGCTGTCGGGTGGCTaGACCACGCTGTATACGCAC +
Preference number: 4 (lower is better)
Translates to: GQPNGLYPGNPSSKTRRVSLSGG*TTLYTH
Trigger: GTGCGTATACAGCGTGGTCCAGCCACCCGACAGCGA...GACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GGGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCACTGCTCAGCCCTGCTaGGTCAGTCTTAGCCTCCCC +
Preference number: 4 (lower is better)
Translates to: GQPNGLYPGNPSSKTRRVTAQPC*VSLSLP
Trigger: GGGGAGGCTAAGACTGACCCAGCAGGGCTGAGCAGT...GACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GAGAGGCAGGAGCAGGCATGGCTTTGTTTCTTCCCAAACCTGCCTGATGTCAAATGCTCGGGCCTCCCCTaGGCTCAGGGTGGCCACAGG +
Preference number: 4 (lower is better)
Translates to: ERQEQAWLCFFPNLPDVKCSGLP*AQGGHR
Trigger: CCTGTGGCCACCCTGAGCCCAGGGGAGGCCCGAGCA...TTTGACATCAGGCAGGTTTGGGAAGAAACAAAGCCATGCCTGCTCCTGCCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CCAGCAGAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTAAGGCCTGGCATGGCTaGTCCCCAGTGGGAGCAACG +
Preference number: 4 (lower is better)
Translates to: PAEGRRGLDMFGPLFPVFKAWHG*SPVGAT
Trigger: CGTTGCTCCCACTGGGGACCAGCCATGCCAGGCCTT...AAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTCTGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CAGGTCCAGCCGGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCGCTGGTACTCAGTACTaGCCAGCAGTAGGGAATCTG +
Preference number: 4 (lower is better)
Translates to: QVQPVTQQGIGQPGRSQVAGTQY*PAVGNL
Trigger: CAGATTCCCTACTGCTGGCCAGTACTGAGTACCAGC...GACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACCGGCTGGACCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CAGGTCCAGCCGGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCGCCAACAAAGGCATGTaGCTTTGGAGCCCAGTCTTC +
Preference number: 4 (lower is better)
Translates to: QVQPVTQQGIGQPGRSQVANKGM*LWSPVF
Trigger: GAAGACTGGGCTCCAAAGCCACATGCCTTTGTTGGC...GACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACCGGCTGGACCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGTGCAGGCTGCACGCACACTaGAGCGAGATGCTTTCCACC +
Preference number: 4 (lower is better)
Translates to: AGAPAPWWAMPGVTLTLCRLHAH*SEMLST
Trigger: GGTGGAAAGCATCTCGCTCCAGTGTGCGTGCAGCCT...GCACAGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGGCACCAGCCCCCTGGTaGGCAATGCCAGGAGTTACT +
Preference number: 4 (lower is better)
Translates to: GSPMGYTQETPPARPEGSAPAPW*AMPGVT
Trigger: AGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGC...CGACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CAAGTGACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCCCCCGCTGCCCAGAGTaGGAGGAGCCGGCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: QVTEGFSSVNFGGRQECSPRCPE*EEPACQ
Trigger: CTGGCAGGCCGGCTCCTCCCACTCTGGGCAGCGGGG...GGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGTCACTTG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000646985.1
CDS-3UTR CCA 90 bp TGTAATCCATCCCAGTGCTTTGTGAAGCTGTGGTGGGAAGATCACTTGAGGCCACCCCGCTGCCCAGAGTaGGAGGAGCCGGCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: CNPSQCFVKLWWEDHLRPPRCPE*EEPACQ
Trigger: CTGGCAGGCCGGCTCCTCCCACTCTGGGCAGCGGGG...TGGCCTCAAGTGATCTTCCCACCACAGCTTCACAAAGCACTGGGATGGATTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649901.1
CDS-3UTR TCA 90 bp GTGACAGGTGGTGACCCTGGAGCCAGATCTGGAAGGCCTTCCTGGGGGCTGCCCGTCCTTCTGCCTCTATaGCCTGCAGAATCTGTTTTG +
Preference number: 4 (lower is better)
Translates to: VTGGDPGARSGRPSWGLPVLLPL*PAESVL
Trigger: CAAAACAGATTCTGCAGGTCATAGAGGCAGAAGGAC...GGGCAGCCCCCAGGAAGGCCTTCCAGATCTGGCTCCAGGGTCACCACCTGTCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR TCA 90 bp CTTGGTGGAGAATGCAACCTTCTTGCTTCAGTTTCAAGTCCCTCTGGGAGTCAGGGGCAGGGTCCTGGGTaGCCTCGGCCTGGCCACGAA +
Preference number: 4 (lower is better)
Translates to: LGGECNLLASVSSPSGSQGQGPG*PRPGHE
Trigger: TTCGTGGCCAGGCCGAGGTCACCCAGGACCCTGCCC...CTGACTCCCAGAGGGACTTGAAACTGAAGCAAGAAGGTTGCATTCTCCACCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
CDS-3UTR TCA 90 bp AGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCCAAGTGACAGAGGGCTTTAGCGGAAGGTCCGAGAGTTaGTCAGGGCACGGAGGTTGG +
Preference number: 4 (lower is better)
Translates to: RKPLQQDQKGRQVTEGFSGRSES*SGHGGW
Trigger: CCAACCTCCGTGCCCTGATCAACTCTCGGACCTTCC...GCTAAAGCCCTCTGTCACTTGGCGACCCTTCTGGTCTTGCTGGAGGGGTTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp CAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGACTCCGTGGTGGGGATaGTCCGGGGGCATATCTGGT +
Preference number: 4 (lower is better)
Translates to: QGIGQPGRSQVNHFTLTSTPWWG*SGGISG
Trigger: ACCAGATATGCCCCCGGATCATCCCCACCACGGAGT...CGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR TCA 90 bp GCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGTGCCACTGCTGTCCTCCGTaGGGTGACCTTCAAAGTCAG +
Preference number: 4 (lower is better)
Translates to: AGAPAPWWAMPGVTLTLCHCCPP*GDLQSQ
Trigger: CTGACTTTGAAGGTCACCTCACGGAGGACAGCAGTG...GCACAGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp GGGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCCCTGTAACATTGCTCTaGTCACCCAGGGCCCGACCT +
Preference number: 4 (lower is better)
Translates to: GQPNGLYPGNPSSKTRRVPVTLL*SPRARP
Trigger: AGGTCGGGCCCTGGGTGATCAGAGCAATGTTACAGG...GACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp GTGACAGGTGGTGACCCTGGAGCCAGATCTGGAAGGCCTTCCTGGGGGCTGCCCGTAGGAGGAGAGATGTaGAAAGCAAGATGCGTTTGC +
Preference number: 4 (lower is better)
Translates to: VTGGDPGARSGRPSWGLPVGGEM*KARCVC
Trigger: GCAAACGCATCTTGCTTTTCACATCTCTCCTCCTAC...GGGCAGCCCCCAGGAAGGCCTTCCAGATCTGGCTCCAGGGTCACCACCTGTCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR TCA 90 bp GCCTTGGGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAATGCTGTGACAGGTGGTaGCCCTGGAGCCAGATCTGG +
Preference number: 4 (lower is better)
Translates to: ALGSPMGYTQETPPARPECCDRW*PWSQIW
Trigger: CCAGATCTGGCTCCAGGGTCACCACCTGTCACAGCA...TTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCCCAAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp GGGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCTCCCAGGTATTGCTGTaGCAGGTGGTGACCCTGGAG +
Preference number: 4 (lower is better)
Translates to: GQPNGLYPGNPSSKTRRVSQVLL*QVVTLE
Trigger: CTCCAGGGTCACCACCTGTCACAGCAATACCTGGGA...GACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp AAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGGTATTGCTGTGACAGGTGCTTTCCCGCTCTGCTaGGGGACTGAGACAGGACCG +
Preference number: 4 (lower is better)
Translates to: KGASQSQESMVPGIAVTGAFPLC*GTETGP
Trigger: CGGTCCTGTCTCAGTCCCTCAGCAGAGCGGGAAAGC...ACCTGTCACAGCAATACCTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375687.10
ENST00000613218.4
ENST00000651418.1
CDS-3UTR TCA 90 bp CAGAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTACCCAACTCCCCCGGGTaGATGAACGAAGCTGCCCCA +
Preference number: 4 (lower is better)
Translates to: QREEEDWTCLGPCSRSLVPNSPG*MNEAAP
Trigger: TGGGGCAGCTTCGTTCATTCACCCGGGGGAGTTGGG...TACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000646985.1
CDS-3UTR GCA 90 bp GGGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGGATGGCGAGACCACTaGAGGGCATCCTTCTTGAGC +
Preference number: 4 (lower is better)
Translates to: GQPNGLYPGNPSSKTRRVGWRDH*RASFLS
Trigger: GCTCAAGAAGGATGCCCTGCAGTGGTCTCGCCATCC...GACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp CTTGGTGGAGAATGCAACCTTCTTGCTTCAGTTTCAAGTCCCTCTGGGAGTCAGGGGCCAGAGAGCCGCTaGTGCTGCTGGACGGGCTGC +
Preference number: 4 (lower is better)
Translates to: LGGECNLLASVSSPSGSQGPESR*CCWTGC
Trigger: GCAGCCCGTCCAGCAGCAGCAGCGGCTCTCTGGCCC...CTGACTCCCAGAGGGACTTGAAACTGAAGCAAGAAGGTTGCATTCTCCACCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
CDS-3UTR GCA 90 bp AGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCCAAGTGACAGAGGGCTTTAGCGGGACTGCTCAGCCCTaGTGGGTCAGTCTTAGCCTC +
Preference number: 4 (lower is better)
Translates to: RKPLQQDQKGRQVTEGFSGTAQP*WVSLSL
Trigger: GAGGCTAAGACTGACCCAGCAGGGCTGAGCAGTCCC...GCTAAAGCCCTCTGTCACTTGGCGACCCTTCTGGTCTTGCTGGAGGGGTTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GGCTGCCCAGGGAACTCACCCATGAATCCAGAAGCACTTAACACTGGTGGTGGTCTGGCAGATGGGGACTaGTCAGCCCTGCTGGGTCAG +
Preference number: 4 (lower is better)
Translates to: GCPGNSPMNPEALNTGGGLADGD*SALLGQ
Trigger: CTGACCCAGCAGGGCTGAGCAGTCCCCATCTGCCAG...ACCACCACCAGTGTTAAGTGCTTCTGGATTCATGGGTGAGTTCCCTGGGCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR GCA 90 bp GGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCTGGCAGATGGGGACTaGTCAGCCCTGCTGGGTCAG +
Preference number: 4 (lower is better)
Translates to: GDPTGHRATWQVTSQSFHLADGD*SALLGQ
Trigger: CTGACCCAGCAGGGCTGAGCAGTCCCCATCTGCCAG...GTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR GCA 90 bp GGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACACTCCAGGTCGGGTGCTaGAGAGGATGTGCCTGGCAG +
Preference number: 4 (lower is better)
Translates to: GQPGRSQVNHFTLTSSSTLQVGC*RGCAWQ
Trigger: CTGCCAGGCACATCCTCTGCAGCACCCGACCTGGAG...TGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR GCA 90 bp GACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTACCCTCCAGGTCGGGTaGTGCAGAGGATGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: DPTGHRATWQVTSQSFHPTLQVG*CRGCAW
Trigger: CCAGGCACATCCTCTGCAGCACCCGACCTGGAGGGT...AGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR GCA 90 bp GAGATGCCCACTCCCATAGGGTCCAAAGTGACAGGGAGGATGTCAAGCAGAGGAACCCTCCAGGTCGGGTaGTGCAGAGGATGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: EMPTPIGSKVTGRMSSRGTLQVG*CRGCAW
Trigger: CCAGGCACATCCTCTGCAGCACCCGACCTGGAGGGT...TCCTCTGCTTGACATCCTCCCTGTCACTTTGGACCCTATGGGAGTGGGCATCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACACCCTCCAGGTCGGGTaGTGCAGAGGATGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: GDPTGHRATWQVTSQSFHTLQVG*CRGCAW
Trigger: CCAGGCACATCCTCTGCAGCACCCGACCTGGAGGGT...GTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR GCA 90 bp CCAGCAGAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTCTCGCCCCTCGGACCTaGAGAGCACGGGCTTTAATG +
Preference number: 4 (lower is better)
Translates to: PAEGRRGLDMFGPLFPVFLAPRT*RARALM
Trigger: CATTAAAGCCCGTGCTCTGCAGGTCCGAGGGGCGAG...AAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTCTGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACACACTGCTGCTGCCTCTaGCACCTCCCTCATCGGTGG +
Preference number: 4 (lower is better)
Translates to: GQPGRSQVNHFTLTSSSTHCCCL*HLPHRW
Trigger: CCACCGATGAGGGAGGTGGCAGAGGCAGCAGCAGTG...TGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp CAGGTCCAGCCGGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCCATGTAAAGATCCCATaGGTAGCGAGCCATGGCTCT +
Preference number: 4 (lower is better)
Translates to: QVQPVTQQGIGQPGRSQVHVKIP*VASHGS
Trigger: AGAGCCATGGCTCGCTACGCATGGGATCTTTACATG...GACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACCGGCTGGACCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp TCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGAGGGCCCGACCTGTCTaGTCTGGACCAAAGGAGATC +
Preference number: 4 (lower is better)
Translates to: SAGAPAPWWAMPGVTLTLRARPV*SGPKEI
Trigger: GATCTCCTTTGGTCCAGAGCAGACAGGTCGGGCCCT...CAGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp CAGGTCCAGCCGGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAGTTCCAGGGGACTATaGCCAGTAGCTTTCCTGTTC +
Preference number: 4 (lower is better)
Translates to: QVQPVTQQGIGQPGRSQVSSRGL*PVAFLF
Trigger: GAACAGGAAAGCTACTGGGCATAGTCCCCTGGAACT...GACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACCGGCTGGACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGTGCGCTTTGTGGCTCAGCTaGACCACACTTCCAGCAAGG +
Preference number: 4 (lower is better)
Translates to: AGAPAPWWAMPGVTLTLCALWLS*TTLPAR
Trigger: CCTTGCTGGAAGTGTGGTGCAGCTGAGCCACAAAGC...GCACAGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp AGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTAAACGGCCTTCCTGGGGGCTaGCCAGGGAACTCACCCATG +
Preference number: 4 (lower is better)
Translates to: REEEDWTCLGPCSRSLVNGLPGG*PGNSPM
Trigger: CATGGGTGAGTTCCCTGGGCAGCCCCCAGGAAGGCC...GTTTACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp AGGTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCTCCCTCCACTGTAGCTaGATGGCGAGACCACTGCAG +
Preference number: 4 (lower is better)
Translates to: RSAGAPAPWWAMPGVTLTSLHCS*MARPLQ
Trigger: CTGCAGTGGTCTCGCCATCCAGCTACAGTGGAGGGA...GGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGTCCCTCCACTGTAGCTaGATGGCGAGACCACTGCAG +
Preference number: 4 (lower is better)
Translates to: GSPMGYTQETPPARPEGSSLHCS*MARPLQ
Trigger: CTGCAGTGGTCTCGCCATCCAGCTACAGTGGAGGGA...CGACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp TCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGTCCCTCCACTGTAGCTaGATGGCGAGACCACTGCAG +
Preference number: 4 (lower is better)
Translates to: SAGAPAPWWAMPGVTLTLSLHCS*MARPLQ
Trigger: CTGCAGTGGTCTCGCCATCCAGCTACAGTGGAGGGA...CAGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GGGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCATCAGCCGTGTCCTCTaGCTCCTCTCCCTCCACTGT +
Preference number: 4 (lower is better)
Translates to: GQPNGLYPGNPSSKTRRVISRVL*LLSLHC
Trigger: ACAGTGGAGGGAGAGGAGCCAGAGGACACGGCTGAT...GACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GGCTGCCCAGGGAACTCACCCATGAATCCAGAAGCACTTAACACTGGTGGTGGTCTCTCGCCATCGGCGTaGCAGCCCGAGAACCCTGAT +
Preference number: 4 (lower is better)
Translates to: GCPGNSPMNPEALNTGGGLSPSA*QPENPD
Trigger: ATCAGGGTTCTCGGGCTGCCACGCCGATGGCGAGAG...ACCACCACCAGTGTTAAGTGCTTCTGGATTCATGGGTGAGTTCCCTGGGCAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000651418.1
CDS-3UTR CCA 90 bp GACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTTGGGTGACCTCGGCCTaGCCACGAATAGCAGCGCTG +
Preference number: 4 (lower is better)
Translates to: DPTGHRATWQVTSQSFHPWVTSA*PRIAAL
Trigger: CAGCGCTGCTATTCGTGGCCAGGCCGAGGTCACCCA...AGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000651418.1
CDS-3UTR CCA 90 bp CAGAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTATGGGTGACCTCGGCCTaGCCACGAATAGCAGCGCTG +
Preference number: 4 (lower is better)
Translates to: QREEEDWTCLGPCSRSLVWVTSA*PRIAAL
Trigger: CAGCGCTGCTATTCGTGGCCAGGCCGAGGTCACCCA...TACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000651418.1
CDS-3UTR CCA 90 bp AGGTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCATCTCGCTGTCGGGTaGCTGGACCACGCTGTATAC +
Preference number: 4 (lower is better)
Translates to: RSAGAPAPWWAMPGVTLTHLAVG*LDHAVY
Trigger: GTATACAGCGTGGTCCAGCCACCCGACAGCGAGATG...GGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GTGACAGGTGGTGACCCTGGAGCCAGATCTGGAAGGCCTTCCTGGGGGCTGCCCTCTGGTTCGGAGATCTaGCCGAGAGCGTTTCTTAAA +
Preference number: 4 (lower is better)
Translates to: VTGGDPGARSGRPSWGLPSGSEI*PRAFLK
Trigger: TTTAAGAAACGCTCTCGGCCAGATCTCCGAACCAGA...GGGCAGCCCCCAGGAAGGCCTTCCAGATCTGGCTCCAGGGTCACCACCTGTCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp GCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCCAAGATGTGCCTGGCAGATaGGGACTGCTCAGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: AQWVIPRKPLQQDQKGRQDVPGR*GLLSPA
Trigger: AGCAGGGCTGAGCAGTCCCCATCTGCCAGGCACATC...TTGGCGACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCCAACTCCGATGGCAGTGGTaGCCGCCTCTCTATGGCAGT +
Preference number: 4 (lower is better)
Translates to: AQWVIPRKPLQQDQKGRQLRWQW*PPLYGS
Trigger: ACTGCCATAGAGAGGCGGCCACCACTGCCATCGGAG...TTGGCGACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CAAGTGACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCTGCTCGGGCCTCCCCTaGGCTCAGGGTGGCCACAGG +
Preference number: 4 (lower is better)
Translates to: QVTEGFSSVNFGGRQECSCSGLP*AQGGHR
Trigger: CCTGTGGCCACCCTGAGCCCAGGGGAGGCCCGAGCA...GGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGTCACTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp AGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCCAAGTGACAGAGGGCTTTAGCGGAGCAACGGGGAGTTaGGAGGCATCTCCTAGCCCA +
Preference number: 4 (lower is better)
Translates to: RKPLQQDQKGRQVTEGFSGATGS*EASPSP
Trigger: TGGGCTAGGAGATGCCTCCCAACTCCCCGTTGCTCC...GCTAAAGCCCTCTGTCACTTGGCGACCCTTCTGGTCTTGCTGGAGGGGTTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACAAGGCCTGGCATGGCTaGTCCCCAGTGGGAGCAACG +
Preference number: 4 (lower is better)
Translates to: GDPTGHRATWQVTSQSFHKAWHG*SPVGAT
Trigger: CGTTGCTCCCACTGGGGACCAGCCATGCCAGGCCTT...GTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GAGAATGCAACCTTCTTGCTTCAGTTTCAAGTCCCTCTGGGAGTCAGGCAGTCCGGGCAAGGCCTGGCATaGCTGGTCCCCAGTGGGAGC +
Preference number: 4 (lower is better)
Translates to: ENATFLLQFQVPLGVRQSGQGLA*LVPSGS
Trigger: GCTCCCACTGGGGACCAGCCATGCCAGGCCTTGCCC...GGACTGCCTGACTCCCAGAGGGACTTGAAACTGAAGCAAGAAGGTTGCATTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp TCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGGCAATGCAGGAGGGGTaGGAGCAGCTTTCTCCCACT +
Preference number: 4 (lower is better)
Translates to: SAGAPAPWWAMPGVTLTLAMQEG*EQLSPT
Trigger: AGTGGGAGAAAGCTGCTCCCACCCCTCCTGCATTGC...CAGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGCAATGCAGGAGGGGTaGGAGCAGCTTTCTCCCACT +
Preference number: 4 (lower is better)
Translates to: VSRCTSPLVGNARSYFNPAMQEG*EQLSPT
Trigger: AGTGGGAGAAAGCTGCTCCCACCCCTCCTGCATTGC...AGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CCAGCCGGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCACAGAGGCTGTATCCGTaGACTCACCGTGAGGACTCA +
Preference number: 4 (lower is better)
Translates to: PAGDPTGHRATWQVTSQSQRLYP*THREDS
Trigger: TGAGTCCTCACGGTGAGTCCACGGATACAGCCTCTG...TGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACCGGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp AGGTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCACACGGCTCTTGGCTaGTACTCAGTACTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: RSAGAPAPWWAMPGVTLTHTALG*YSVLAS
Trigger: GCTGGCCAGTACTGAGTACCAGCCAAGAGCCGTGTG...GGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGCTGAGGACCCAGGCATaGACAGGCACACGGCTCTTG +
Preference number: 4 (lower is better)
Translates to: QGIGQPGRSQVNHFTLTSLRTQA*TGTRLL
Trigger: CAAGAGCCGTGTGCCTGTCCATGCCTGGGTCCTCAG...CGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTAGAGCTCAGGCTGGCTaGCCTTGGGCAGCCCAATGG +
Preference number: 4 (lower is better)
Translates to: DPTGHRATWQVTSQSFHPRAQAG*PWAAQW
Trigger: CCATTGGGCTGCCCAAGGCCAGCCAGCCTGAGCTCT...AGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GAGATGCCCACTCCCATAGGGTCCAAAGTGACAGGGAGGATGTCAAGCAGAGGAAGAGCTCAGGCTGGCTaGCCTTGGGCAGCCCAATGG +
Preference number: 4 (lower is better)
Translates to: EMPTPIGSKVTGRMSSRGRAQAG*PWAAQW
Trigger: CCATTGGGCTGCCCAAGGCCAGCCAGCCTGAGCTCT...TCCTCTGCTTGACATCCTCCCTGTCACTTTGGACCCTATGGGAGTGGGCATCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CCAGCCGGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCAGGGCATCGGGCAACCTaGCAGGTCACAAGTCAATCA +
Preference number: 4 (lower is better)
Translates to: PAGDPTGHRATWQVTSQSGHRAT*QVTSQS
Trigger: TGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCC...TGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACCGGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR TCA 90 bp GGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACAGCACTCAGTGCAGCCCGAGAACCCTaGTGCAGATTCCACGTGGGC +
Preference number: 4 (lower is better)
Translates to: GRSQVNHFTLTSSSTALSAAREP*CRFHVG
Trigger: GCCCACGTGGAATCTGCATCAGGGTTCTCGGGCTGC...ACTGAGTGCTGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
CDS-3UTR TCA 90 bp CTTTCACATACACAGGTGCGTGGAGATGCCCACTCCCATAGGGTCCAAAGTGACGCAGCCCGAGAACCCTaGTGCAGATTCCACGTGGGC +
Preference number: 4 (lower is better)
Translates to: LSHTQVRGDAHSHRVQSDAAREP*CRFHVG
Trigger: GCCCACGTGGAATCTGCATCAGGGTTCTCGGGCTGC...GTCACTTTGGACCCTATGGGAGTGGGCATCTCCACGCACCTGTGTATGTGAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
CDS-3UTR TCA 90 bp CAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGCTGTTGCGCTTCATTTaGCCTGTGGCTGGCTTCCGG +
Preference number: 4 (lower is better)
Translates to: QGIGQPGRSQVNHFTLTSLLRFI*PVAGFR
Trigger: CCGGAAGCCAGCCACAGGTCAAATGAAGCGCAACAG...CGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000651418.1
CDS-3UTR TCA 90 bp GCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCCAACTGTTGCGCTTCATTTaGCCTGTGGCTGGCTTCCGG +
Preference number: 4 (lower is better)
Translates to: AQWVIPRKPLQQDQKGRQLLRFI*PVAGFR
Trigger: CCGGAAGCCAGCCACAGGTCAAATGAAGCGCAACAG...TTGGCGACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
CDS-3UTR TCA 90 bp AGGTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCACGGAGGTTGGTGTTaGCAAGAATGGACCCAGGTG +
Preference number: 4 (lower is better)
Translates to: RSAGAPAPWWAMPGVTLTHGGWC*QEWTQV
Trigger: CACCTGGGTCCATTCTTGTCAACACCAACCTCCGTG...GGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp GGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACGGAAGGTCCGAGAGTTaGTCAGGGCACGGAGGTTGG +
Preference number: 4 (lower is better)
Translates to: GDPTGHRATWQVTSQSFHGRSES*SGHGGW
Trigger: CCAACCTCCGTGCCCTGATCAACTCTCGGACCTTCC...GTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR TCA 90 bp GGCTGCCCAGGGAACTCACCCATGAATCCAGAAGCACTTAACACTGGTGGTGGTGGAAGGTCCGAGAGTTaGTCAGGGCACGGAGGTTGG +
Preference number: 4 (lower is better)
Translates to: GCPGNSPMNPEALNTGGGGRSES*SGHGGW
Trigger: CCAACCTCCGTGCCCTGATCAACTCTCGGACCTTCC...ACCACCACCAGTGTTAAGTGCTTCTGGATTCATGGGTGAGTTCCCTGGGCAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR TCA 90 bp GCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCCAATTAGTGCACTGCTGCTaGGACGCAACAGGCCATCCG +
Preference number: 4 (lower is better)
Translates to: AQWVIPRKPLQQDQKGRQLVHCC*DATGHP
Trigger: CGGATGGCCTGTTGCGTCTCAGCAGCAGTGCACTAA...TTGGCGACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp AGGTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCGTGTTACGAAAGGACTaGCGATCTTCAAGCCGGGGC +
Preference number: 4 (lower is better)
Translates to: RSAGAPAPWWAMPGVTLTVLRKD*RSSSRG
Trigger: GCCCCGGCTTGAAGATCGTCAGTCCTTTCGTAACAC...GGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp GCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGTGCCAGGCAATCAGTCGGTaGGGATTCAGGTGTGGAACT +
Preference number: 4 (lower is better)
Translates to: AGAPAPWWAMPGVTLTLCQAISR*GFRCGT
Trigger: AGTTCCACACCTGAATCCTCACCGACTGATTGCCTG...GCACAGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp CAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGTCCGTGGACTCACCGTaGGGACTCAGTGCTTCAGAG +
Preference number: 4 (lower is better)
Translates to: QGIGQPGRSQVNHFTLTSSVDSP*GLSASE
Trigger: CTCTGAAGCACTGAGTCCTCACGGTGAGTCCACGGA...CGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp AGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCCAAGTGACAGAGGGCTTTAGCTCCGTGGACTCACCGTaGGGACTCAGTGCTTCAGAG +
Preference number: 4 (lower is better)
Translates to: RKPLQQDQKGRQVTEGFSSVDSP*GLSASE
Trigger: CTCTGAAGCACTGAGTCCTCACGGTGAGTCCACGGA...GCTAAAGCCCTCTGTCACTTGGCGACCCTTCTGGTCTTGCTGGAGGGGTTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp AGGTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCACTGCTGTCCTCCGTaGGGTGACCTTCAAAGTCAG +
Preference number: 4 (lower is better)
Translates to: RSAGAPAPWWAMPGVTLTHCCPP*GDLQSQ
Trigger: CTGACTTTGAAGGTCACCTCACGGAGGACAGCAGTG...GGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp CAGAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTAGTTAGTGGCCTCCACTaGGGACCCAGGCATGGACAG +
Preference number: 4 (lower is better)
Translates to: QREEEDWTCLGPCSRSLVVSGLH*GPRHGQ
Trigger: CTGTCCATGCCTGGGTCCTCAGTGGAGGCCACTAAC...TACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp GTGACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCTGCGCAGGCCTGGGGCGCTaGAGGGTTGCAGCCACATTC +
Preference number: 4 (lower is better)
Translates to: VTEGFSSVNFGGRQECSCAGLGR*RVAATF
Trigger: GAATGTGGCTGCAACCCTTCAGCGCCCCAGGCCTGC...GCAGGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGTCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp GAGATGCCCACTCCCATAGGGTCCAAAGTGACAGGGAGGATGTCAAGCAGAGGAGGCATCCCTTCCAAGTaGCCCACCAGTTCCAGGGGA +
Preference number: 4 (lower is better)
Translates to: EMPTPIGSKVTGRMSSRGGIPSK*PTSSRG
Trigger: TCCCCTGGAACTGGTGGGTCACTTGGAAGGGATGCC...TCCTCTGCTTGACATCCTCCCTGTCACTTTGGACCCTATGGGAGTGGGCATCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp GCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGTGCAGAAGGGCAAGTCCATaGCAAAGGGCATCCCTTCCA +
Preference number: 4 (lower is better)
Translates to: AGAPAPWWAMPGVTLTLCRRASP*QRASLP
Trigger: TGGAAGGGATGCCCTTTGTCATGGACTTGCCCTTCT...GCACAGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp AGGTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCGCGCTTCATTTGACCTaGTGCAGATTCCACGTGGGC +
Preference number: 4 (lower is better)
Translates to: RSAGAPAPWWAMPGVTLTALHLT*CRFHVG
Trigger: GCCCACGTGGAATCTGCATCAGGTCAAATGAAGCGC...GGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646985.1
CDS-3UTR GCA 90 bp GCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCCAAGGATGGCGAGACCACTaGAGGGCATCCTTCTTGAGC +
Preference number: 4 (lower is better)
Translates to: AQWVIPRKPLQQDQKGRQGWRDH*RASFLS
Trigger: GCTCAAGAAGGATGCCCTGCAGTGGTCTCGCCATCC...TTGGCGACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp AGGTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCAGATGCAGAGGCACGTaGCAAGTTGTCTGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: RSAGAPAPWWAMPGVTLTRCRGT*QVVWLS
Trigger: GCTGAGCCAGACAACTTGGCACGTGCCTCTGCATCT...GGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGTGCGATGCAGAGGCCGCCTaGTCAAAGGATTTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: AGAPAPWWAMPGVTLTLCDAEAA*SKDFLF
Trigger: GAAGAGGAAATCCTTTGAGCAGGCGGCCTCTGCATC...GCACAGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp CCAGCCGGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCACTTTTCGGGAAAGGATaGAGAGGCCGCCTGCTCAAA +
Preference number: 4 (lower is better)
Translates to: PAGDPTGHRATWQVTSQSLFGKG*RGRLLK
Trigger: TTTGAGCAGGCGGCCTCTGCATCCTTTCCCGAAAAG...TGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACCGGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR GCA 90 bp GCCTTGGGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAACGGGCTTTAATGTCTaGGAGGGTCCTGGCGCCAGT +
Preference number: 4 (lower is better)
Translates to: ALGSPMGYTQETPPARPETGFNV*EGPGAS
Trigger: ACTGGCGCCAGGACCCTCGCAGACATTAAAGCCCGT...TTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCCCAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp CTTTCACATACACAGGTGCGTGGAGATGCCCACTCCCATAGGGTCCAAAGTGACTACACTTTCCAGGGGTaGTCGGGCCTCCCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: LSHTQVRGDAHSHRVQSDYTFQG*SGLPWA
Trigger: AGCCCAGGGGAGGCCCGAGCACCCCTGGAAAGTGTA...GTCACTTTGGACCCTATGGGAGTGGGCATCTCCACGCACCTGTGTATGTGAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp AGGTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCGTGGGGATTCTGACATaGTGTCATCGTGGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: RSAGAPAPWWAMPGVTLTVGILT*CHRGLV
Trigger: CACCAGCCCACGATGACAGCATGTCAGAATCCCCAC...GGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGGTGGGGATTCTGACATaGTGTCATCGTGGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: GSPMGYTQETPPARPEGSVGILT*CHRGLV
Trigger: CACCAGCCCACGATGACAGCATGTCAGAATCCCCAC...CGACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GTGACAGGTGGTGACCCTGGAGCCAGATCTGGAAGGCCTTCCTGGGGGCTGCCCGTCAAAACTTGGGACTaGCTTGCAATTCTTTTGGGG +
Preference number: 4 (lower is better)
Translates to: VTGGDPGARSGRPSWGLPVKTWD*LAILLG
Trigger: CCCCAAAAGAATTGCAAGGCAGTCCCAAGTTTTGAC...GGGCAGCCCCCAGGAAGGCCTTCCAGATCTGGCTCCAGGGTCACCACCTGTCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCCAAAGGGCCCGACCTGTCTaGTCTGGACCAAAGGAGATC +
Preference number: 4 (lower is better)
Translates to: AQWVIPRKPLQQDQKGRQRARPV*SGPKEI
Trigger: GATCTCCTTTGGTCCAGAGCAGACAGGTCGGGCCCT...TTGGCGACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGTCATGGCTTTCAGGCTaGACGCACACTGGAGCGAGA +
Preference number: 4 (lower is better)
Translates to: GSPMGYTQETPPARPEGSSWLSG*THTGAR
Trigger: TCTCGCTCCAGTGTGCGTGCAGCCTGAAAGCCATGA...CGACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCCAACATCAGGCTCTGTCTTaGAGGAGAGCTCAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: AQWVIPRKPLQQDQKGRQHQALS*RRAQAG
Trigger: GCCAGCCTGAGCTCTCCTGCAAGACAGAGCCTGATG...TTGGCGACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp TCAATCATTTCACCCTCACGTCGAGCAGCACAGCACTCAGTGGCTCTGACAACAGGCCTTCCTGGGGGCTaGCCAGGGAACTCACCCATG +
Preference number: 4 (lower is better)
Translates to: SIISPSRRAAQHSVALTTGLPGG*PGNSPM
Trigger: CATGGGTGAGTTCCCTGGGCAGCCCCCAGGAAGGCC...TGTTGTCAGAGCCACTGAGTGCTGTGCTGCTCGACGTGAGGGTGAAATGATTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp TCAGACACAAGCTGTAGACTAACAGACCACTCCCAAGCTTACAGCAGGTTCATACGGCGCCCGGGTGCGTaGGTGTCTGCCGTGGGTGTG +
Preference number: 4 (lower is better)
Translates to: SDTSCRLTDHSQAYSRFIRRPGA*VSAVGV
Trigger: CACACCCACGGCAGACACGCACGCACCCGGGCGCCG...TATGAACCTGCTGTAAGCTTGGGAGTGGTCTGTTAGTCTACAGCTTGTGTCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542461.5
CDS-3UTR CCA 90 bp AGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTAAACCTCTCGCCATCGGCGTaGCAGCCCGAGAACCCTGAT +
Preference number: 4 (lower is better)
Translates to: REEEDWTCLGPCSRSLVNLSPSA*QPENPD
Trigger: ATCAGGGTTCTCGGGCTGCCACGCCGATGGCGAGAG...GTTTACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000651418.1
CDS-3UTR CCA 90 bp GGGGGTAGTGGAAGACTGGCATTTCTACTTAGTTCAGGTAGGTTAACTCCCTTGAGCCGCTGCTGCTGCTaGACGGGCTGCCGCTCTCGC +
Preference number: 4 (lower is better)
Translates to: GGSGRLAFLLSSGRLTPLSRCCC*TGCRSR
Trigger: GCGAGAGCGGCAGCCCGTCCAGCAGCAGCAGCGGCT...CAAGGGAGTTAACCTACCTGAACTAAGTAGAAATGCCAGTCTTCCACTACCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
CDS-3UTR CCA 90 bp CAGGTCCAGCCGGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCTGTGATGGTAAGGCATaGAAGGTCCGAGAGTTGATC +
Preference number: 4 (lower is better)
Translates to: QVQPVTQQGIGQPGRSQVCDGKA*KVRELI
Trigger: GATCAACTCTCGGACCTTCCATGCCTTACCATCACA...GACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACCGGCTGGACCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp GGGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGATTCCTTCTGGCTCTaGTTCGGAGATCTGGCCGAG +
Preference number: 4 (lower is better)
Translates to: GQPNGLYPGNPSSKTRRVDSFWL*FGDLAE
Trigger: CTCGGCCAGATCTCCGAACCAGAGCCAGAAGGAATC...GACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CAGGTCCAGCCGGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCCTCTTTAGTGGGCTGTaGCTTTTCGGTGTGAACACT +
Preference number: 4 (lower is better)
Translates to: QVQPVTQQGIGQPGRSQVLFSGL*LFGVNT
Trigger: AGTGTTCACACCGAAAAGCCACAGCCCACTAAAGAG...GACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACCGGCTGGACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp AAAAGTACGTCAAAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGGTATTTGTCTGCGAGGGTCCTaGCGCCAGTCCAACCCCGGC +
Preference number: 4 (lower is better)
Translates to: KSTSKGASQSQESMVPGICLRGS*RQSNPG
Trigger: GCCGGGGTTGGACTGGCGCCAGGACCCTCGCAGACA...AATACCTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTTTGACGTACTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp GACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCTCCGATGGCAGTGGTaGCCGCCTCTCTATGGCAGT +
Preference number: 4 (lower is better)
Translates to: DPTGHRATWQVTSQSFHPLRWQW*PPLYGS
Trigger: ACTGCCATAGAGAGGCGGCCACCACTGCCATCGGAG...AGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp TCAATCATTTCACCCTCACGTCGAGCAGCACAGCACTCAGTGGCTCTGACAACACCCCTCCGATGGCAGTaGTGGCCGCCTCTCTATGGC +
Preference number: 4 (lower is better)
Translates to: SIISPSRRAAQHSVALTTPLRWQ*WPPLYG
Trigger: GCCATAGAGAGGCGGCCACCACTGCCATCGGAGGGG...TGTTGTCAGAGCCACTGAGTGCTGTGCTGCTCGACGTGAGGGTGAAATGATTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp TGTAGGAGGAGAGATGTGAAAAGCAAGATGCGTTTGCTCGGTGGCATGTGGGCACCCCTCCGATGGCAGTaGTGGCCGCCTCTCTATGGC +
Preference number: 4 (lower is better)
Translates to: CRRRDVKSKMRLLGGMWAPLRWQ*WPPLYG
Trigger: GCCATAGAGAGGCGGCCACCACTGCCATCGGAGGGG...TGCCCACATGCCACCGAGCAAACGCATCTTGCTTTTCACATCTCTCCTCCTACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp AAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGGTATTGCTGTGACAGGTCTGAGGACCCAGGCATaGACAGGCACACGGCTCTTG +
Preference number: 4 (lower is better)
Translates to: KGASQSQESMVPGIAVTGLRTQA*TGTRLL
Trigger: CAAGAGCCGTGTGCCTGTCCATGCCTGGGTCCTCAG...ACCTGTCACAGCAATACCTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GAGATGCCCACTCCCATAGGGTCCAAAGTGACAGGGAGGATGTCAAGCAGAGGACTGAGGACCCAGGCATaGACAGGCACACGGCTCTTG +
Preference number: 4 (lower is better)
Translates to: EMPTPIGSKVTGRMSSRGLRTQA*TGTRLL
Trigger: CAAGAGCCGTGTGCCTGTCCATGCCTGGGTCCTCAG...TCCTCTGCTTGACATCCTCCCTGTCACTTTGGACCCTATGGGAGTGGGCATCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CAGGTCCAGCCGGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAGCGAGCCATGGCTCTaGTCTTTTGTAAGTGGTACT +
Preference number: 4 (lower is better)
Translates to: QVQPVTQQGIGQPGRSQVSEPWL*SFVSGT
Trigger: AGTACCACTTACAAAAGACCAGAGCCATGGCTCGCT...GACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACCGGCTGGACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp AGGTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCGCCTTGCAATTCTTTTaGGGTGCTCCAGGAGCCTGG +
Preference number: 4 (lower is better)
Translates to: RSAGAPAPWWAMPGVTLTALQFF*GAPGAW
Trigger: CCAGGCTCCTGGAGCACCCCAAAAGAATTGCAAGGC...GGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CCAGCCGGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCAGGTAGTAAGATCTCCTaGGCTCTTTCCTGGAGCAGC +
Preference number: 4 (lower is better)
Translates to: PAGDPTGHRATWQVTSQSGSKIS*ALSWSS
Trigger: GCTGCTCCAGGAAAGAGCCCAGGAGATCTTACTACC...TGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACCGGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGTGCCCCACTGGGAAAAACTaGAGGGATCTCAGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: AGAPAPWWAMPGVTLTLCPTGKN*RDLSRK
Trigger: CTTCCTGCTGAGATCCCTCCAGTTTTTCCCAGTGGG...GCACAGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTAGCCCAGTCTTCCCTTaGAGTCTGTACCCCACCAGA +
Preference number: 4 (lower is better)
Translates to: VSRCTSPLVGNARSYFNPSPVFP*SLYPTR
Trigger: TCTGGTGGGGTACAGACTCCAAGGGAAGACTGGGCT...AGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CCAGCCGGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCAAAAGGCATGTGGCTTTaGAGCCCAGTCTTCCCTTGG +
Preference number: 4 (lower is better)
Translates to: PAGDPTGHRATWQVTSQSKGMWL*SPVFPW
Trigger: CCAAGGGAAGACTGGGCTCCAAAGCCACATGCCTTT...TGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACCGGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGTGCTGCTTGATGCTGAGTTaGGAGGGGAGAGAAGAAGGC +
Preference number: 4 (lower is better)
Translates to: AGAPAPWWAMPGVTLTLCCLMLS*EGREEG
Trigger: GCCTTCTTCTCTCCCCTCCCAACTCAGCATCAAGCA...GCACAGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp AGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCCAAGTGACAGAGGGCTTTAGCAGGCTGCACGCACACTaGAGCGAGATGCTTTCCACC +
Preference number: 4 (lower is better)
Translates to: RKPLQQDQKGRQVTEGFSRLHAH*SEMLST
Trigger: GGTGGAAAGCATCTCGCTCCAGTGTGCGTGCAGCCT...GCTAAAGCCCTCTGTCACTTGGCGACCCTTCTGGTCTTGCTGGAGGGGTTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCCAAAGGCTGCACGCACACTaGAGCGAGATGCTTTCCACC +
Preference number: 4 (lower is better)
Translates to: AQWVIPRKPLQQDQKGRQRLHAH*SEMLST
Trigger: GGTGGAAAGCATCTCGCTCCAGTGTGCGTGCAGCCT...TTGGCGACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGTGCAAGCAGTGCTTTCTCTaGGCAGCCTCATGGACCAGA +
Preference number: 4 (lower is better)
Translates to: AGAPAPWWAMPGVTLTLCKQCFL*AASWTR
Trigger: TCTGGTCCATGAGGCTGCCCAGAGAAAGCACTGCTT...GCACAGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCAGCACAGCACTCAGTaGCTCTGCAGAGCACGGGCT +
Preference number: 4 (lower is better)
Translates to: DPTGHRATWQVTSQSFHPQHSTQ*LCRARA
Trigger: AGCCCGTGCTCTGCAGAGCCACTGAGTGCTGTGCTG...AGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651418.1
CDS-3UTR TCA 90 bp GAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTAAAGGAAGGTCCGAGAGTTaGTCAGGGCACGGAGGTTGG +
Preference number: 4 (lower is better)
Translates to: EGRRGLDMFGPLFPVFGKGRSES*SGHGGW
Trigger: CCAACCTCCGTGCCCTGATCAACTCTCGGACCTTCC...TTTACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR TCA 90 bp TCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGCACACAAGCCACTTTTaGTTTCAGCCTCCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: SAGAPAPWWAMPGVTLTLHTSHF*FQPPPG
Trigger: GCCAGGAGGAGGCTGAAATCAAAAGTGGCTTGTGTG...CAGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp CCAGCCGGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCAACGCTGTATACGCACTaGTTCTCCTGGGACACACAA +
Preference number: 4 (lower is better)
Translates to: PAGDPTGHRATWQVTSQSTLYTH*FSWDTQ
Trigger: TTGTGTGTCCCAGGAGAATCAGTGCGTATACAGCGT...TGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACCGGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR TCA 90 bp AGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCCAAGTGACAGAGGGCTTTAGCGTGTTACGAAAGGACTaGCGATCTTCAAGCCGGGGC +
Preference number: 4 (lower is better)
Translates to: RKPLQQDQKGRQVTEGFSVLRKD*RSSSRG
Trigger: GCCCCGGCTTGAAGATCGTCAGTCCTTTCGTAACAC...GCTAAAGCCCTCTGTCACTTGGCGACCCTTCTGGTCTTGCTGGAGGGGTTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp GGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACATCCGTGGACTCACCGTaGGGACTCAGTGCTTCAGAG +
Preference number: 4 (lower is better)
Translates to: GQPGRSQVNHFTLTSSSTSVDSP*GLSASE
Trigger: CTCTGAAGCACTGAGTCCTCACGGTGAGTCCACGGA...TGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp GCCGGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCTGTCCTCCGTGAGGTaGCCTTCAAAGTCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: AGDPTGHRATWQVTSQSFLSSVR*PSKSEA
Trigger: AGCCTCTGACTTTGAAGGTCACCTCACGGAGGACAG...AAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACCGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp GGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACAGCACTCAGTGGCATCCCTTCCAAGTaGCCCACCAGTTCCAGGGGA +
Preference number: 4 (lower is better)
Translates to: GRSQVNHFTLTSSSTALSGIPSK*PTSSRG
Trigger: TCCCCTGGAACTGGTGGGTCACTTGGAAGGGATGCC...ACTGAGTGCTGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp CAAGTGACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCGCTCCAGAGGCTCACTaGGCCCCTTCCCTGGCTCTC +
Preference number: 4 (lower is better)
Translates to: QVTEGFSSVNFGGRQECSAPEAH*APSLAL
Trigger: GAGAGCCAGGGAAGGGGCTCAGTGAGCCTCTGGAGC...GGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGTCACTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp CTTGGTGGAGAATGCAACCTTCTTGCTTCAGTTTCAAGTCCCTCTGGGAGTCAGGCTCCAGAGGCTCACTaGGCCCCTTCCCTGGCTCTC +
Preference number: 4 (lower is better)
Translates to: LGGECNLLASVSSPSGSQAPEAH*APSLAL
Trigger: GAGAGCCAGGGAAGGGGCTCAGTGAGCCTCTGGAGC...CTGACTCCCAGAGGGACTTGAAACTGAAGCAAGAAGGTTGCATTCTCCACCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp CCAGCCGGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCACCGTGCTGCTGTCAGTaGACATTTGCAAGGAAAGTG +
Preference number: 4 (lower is better)
Translates to: PAGDPTGHRATWQVTSQSPCCCQ*TFARKV
Trigger: CACTTTCCTTGCAAATGTTCACTGACAGCAGCACGG...TGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACCGGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp AACAAGGCAAGGGAAAACACACACAGGGGCATCTACTTGCTGGAAACATGTTGGAGCAGGTCCAGCCGGTaGCCCAACAGGGCATCGGGC +
Preference number: 4 (lower is better)
Translates to: NKARENTHRGIYLLETCWSRSSR*PNRASG
Trigger: GCCCGATGCCCTGTTGGGTCACCGGCTGGACCTGCT...CCAACATGTTTCCAGCAAGTAGATGCCCCTGTGTGTGTTTTCCCTTGCCTTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR TCA 90 bp GACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTTCCCAGGTATTGCTGTaGCAGGTGGTGACCCTGGAG +
Preference number: 4 (lower is better)
Translates to: DPTGHRATWQVTSQSFHPSQVLL*QVVTLE
Trigger: CTCCAGGGTCACCACCTGTCACAGCAATACCTGGGA...AGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR TCA 90 bp TGTAGGAGGAGAGATGTGAAAAGCAAGATGCGTTTGCTCGGTGGCATGTGGGCAGCTTTCCCGCTCTGCTaGGGGACTGAGACAGGACCG +
Preference number: 4 (lower is better)
Translates to: CRRRDVKSKMRLLGGMWAAFPLC*GTETGP
Trigger: CGGTCCTGTCTCAGTCCCTCAGCAGAGCGGGAAAGC...TGCCCACATGCCACCGAGCAAACGCATCTTGCTTTTCACATCTCTCCTCCTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375687.10
ENST00000613218.4
ENST00000651418.1
CDS-3UTR TCA 90 bp TCCTCTCCCTCCACTGTAGCTGGATGGCGAGACCACTGCAGGGCATCCTTCTGTCATCCCAGTGCTTTGTaGAGCTGTGGTGGGAAGATC +
Preference number: 4 (lower is better)
Translates to: SSPSTVAGWRDHCRASFCHPSAL*SCGGKI
Trigger: GATCTTCCCACCACAGCTTCACAAAGCACTGGGATG...ACAGAAGGATGCCCTGCAGTGGTCTCGCCATCCAGCTACAGTGGAGGGAGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644587.1
CDS-3UTR GCA 90 bp GGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACAGGATGGCGAGACCACTaGAGGGCATCCTTCTTGAGC +
Preference number: 4 (lower is better)
Translates to: GQPGRSQVNHFTLTSSSTGWRDH*RASFLS
Trigger: GCTCAAGAAGGATGCCCTGCAGTGGTCTCGCCATCC...TGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR GCA 90 bp TCAATCATTTCACCCTCACGTCGAGCAGCACAGCACTCAGTGGCTCTGACAACACTGGCAGATGGGGACTaGTCAGCCCTGCTGGGTCAG +
Preference number: 4 (lower is better)
Translates to: SIISPSRRAAQHSVALTTLADGD*SALLGQ
Trigger: CTGACCCAGCAGGGCTGAGCAGTCCCCATCTGCCAG...TGTTGTCAGAGCCACTGAGTGCTGTGCTGCTCGACGTGAGGGTGAAATGATTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GTGACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCTGCCTCCAGGTCGGGTGCTaGAGAGGATGTGCCTGGCAG +
Preference number: 4 (lower is better)
Translates to: VTEGFSSVNFGGRQECSCLQVGC*RGCAWQ
Trigger: CTGCCAGGCACATCCTCTGCAGCACCCGACCTGGAG...GCAGGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGTCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGGATGCAGAGGCCGCCTaGTCAAAGGATTTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: GSPMGYTQETPPARPEGSDAEAA*SKDFLF
Trigger: GAAGAGGAAATCCTTTGAGCAGGCGGCCTCTGCATC...CGACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GAGATGCCCACTCCCATAGGGTCCAAAGTGACAGGGAGGATGTCAAGCAGAGGAACGGGCTTTAATGTCTaGGAGGGTCCTGGCGCCAGT +
Preference number: 4 (lower is better)
Translates to: EMPTPIGSKVTGRMSSRGTGFNV*EGPGAS
Trigger: ACTGGCGCCAGGACCCTCGCAGACATTAAAGCCCGT...TCCTCTGCTTGACATCCTCCCTGTCACTTTGGACCCTATGGGAGTGGGCATCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp TCAATCATTTCACCCTCACGTCGAGCAGCACAGCACTCAGTGGCTCTGACAACATACACTTTCCAGGGGTaGTCGGGCCTCCCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: SIISPSRRAAQHSVALTTYTFQG*SGLPWA
Trigger: AGCCCAGGGGAGGCCCGAGCACCCCTGGAAAGTGTA...TGTTGTCAGAGCCACTGAGTGCTGTGCTGCTCGACGTGAGGGTGAAATGATTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GAGAGGCAGGAGCAGGCATGGCTTTGTTTCTTCCCAAACCTGCCTGATGTCAAATACACTTTCCAGGGGTaGTCGGGCCTCCCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: ERQEQAWLCFFPNLPDVKYTFQG*SGLPWA
Trigger: AGCCCAGGGGAGGCCCGAGCACCCCTGGAAAGTGTA...TTTGACATCAGGCAGGTTTGGGAAGAAACAAAGCCATGCCTGCTCCTGCCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGACAGTAACTGCCATTaGTGTCACTGCCTCCTCGAG +
Preference number: 4 (lower is better)
Translates to: VSRCTSPLVGNARSYFNPDSNCH*CHCLLE
Trigger: CTCGAGGAGGCAGTGACAGCAATGGCAGTTACTGTC...AGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp TCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGAGGGGCAAGCTACCCTaGAGCAACTGCATCACAAGT +
Preference number: 4 (lower is better)
Translates to: SAGAPAPWWAMPGVTLTLRGKLP*SNCITS
Trigger: ACTTGTGATGCAGTTGCTGCAGGGTAGCTTGCCCCT...CAGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GCCGGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTGCTTTGTGGCTCAGCTaGACCACACTTCCAGCAAGG +
Preference number: 4 (lower is better)
Translates to: AGDPTGHRATWQVTSQSFALWLS*TTLPAR
Trigger: CCTTGCTGGAAGTGTGGTGCAGCTGAGCCACAAAGC...AAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACCGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GCCTTGGGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAATCATGGCTTTCAGGCTaGACGCACACTGGAGCGAGA +
Preference number: 4 (lower is better)
Translates to: ALGSPMGYTQETPPARPESWLSG*THTGAR
Trigger: TCTCGCTCCAGTGTGCGTGCAGCCTGAAAGCCATGA...TTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCCCAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACACGCAACCCCACTCCGTaGCACATCAGGCTCTGTCTT +
Preference number: 4 (lower is better)
Translates to: GQPGRSQVNHFTLTSSSTRNPTP*HIRLCL
Trigger: AAGACAGAGCCTGATGTGGCACGGAGTGGGGTTGCG...TGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp AAAAGTACGTCAAAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGGTATTGGCCTTCCTGGGGGCTaGCCAGGGAACTCACCCATG +
Preference number: 4 (lower is better)
Translates to: KSTSKGASQSQESMVPGIGLPGG*PGNSPM
Trigger: CATGGGTGAGTTCCCTGGGCAGCCCCCAGGAAGGCC...AATACCTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTTTGACGTACTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR GCA 90 bp CATGGCTTTGTTTCTTCCCAAACCTGCCTGATGTCAAAAGTACGTCAAAAGGAGCGGCGCCCGGGTGCGTaGGTGTCTGCCGTGGGTGTG +
Preference number: 4 (lower is better)
Translates to: HGFVSSQTCLMSKVRQKERRPGA*VSAVGV
Trigger: CACACCCACGGCAGACACGCACGCACCCGGGCGCCG...CTCCTTTTGACGTACTTTTGACATCAGGCAGGTTTGGGAAGAAACAAAGCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375687.10
ENST00000613218.4
ENST00000651418.1
CDS-3UTR GCA 90 bp AAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGGTATTGCTGTGACAGGTGTGAATGAACGAAGCTaGCCCAGACCCCCAGACGCT +
Preference number: 4 (lower is better)
Translates to: KGASQSQESMVPGIAVTGVNERS*PRPPDA
Trigger: AGCGTCTGGGGGTCTGGGGCAGCTTCGTTCATTCAC...ACCTGTCACAGCAATACCTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646985.1
CDS-3UTR CCA 90 bp GACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTTCCACTGTAGCTGGATaGCGAGACCACTGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: DPTGHRATWQVTSQSFHPSTVAG*RDHCRA
Trigger: TGCCCTGCAGTGGTCTCGCCATCCAGCTACAGTGGA...AGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp GGCTGCCCAGGGAACTCACCCATGAATCCAGAAGCACTTAACACTGGTGGTGGTTCCACTGTAGCTGGATaGCGAGACCACTGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: GCPGNSPMNPEALNTGGGSTVAG*RDHCRA
Trigger: TGCCCTGCAGTGGTCTCGCCATCCAGCTACAGTGGA...ACCACCACCAGTGTTAAGTGCTTCTGGATTCATGGGTGAGTTCCCTGGGCAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp GACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTATCAGCCGTGTCCTCTaGCTCCTCTCCCTCCACTGT +
Preference number: 4 (lower is better)
Translates to: DPTGHRATWQVTSQSFHPISRVL*LLSLHC
Trigger: ACAGTGGAGGGAGAGGAGCCAGAGGACACGGCTGAT...AGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp AAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGGTATTGCTGTGACAGGTATCAGCCGTGTCCTCTaGCTCCTCTCCCTCCACTGT +
Preference number: 4 (lower is better)
Translates to: KGASQSQESMVPGIAVTGISRVL*LLSLHC
Trigger: ACAGTGGAGGGAGAGGAGCCAGAGGACACGGCTGAT...ACCTGTCACAGCAATACCTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp TCCTCTCCCTCCACTGTAGCTGGATGGCGAGACCACTGCAGGGCATCCTTCTGTAGCTGTCCCTGGGATTaGAAAGAGGTCGACTCTGAG +
Preference number: 4 (lower is better)
Translates to: SSPSTVAGWRDHCRASFCSCPWD*KEVDSE
Trigger: CTCAGAGTCGACCTCTTTCCAATCCCAGGGACAGCT...ACAGAAGGATGCCCTGCAGTGGTCTCGCCATCCAGCTACAGTGGAGGGAGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644587.1
CDS-3UTR CCA 90 bp GGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCTCTGTAGCTGTCCCTaGGATTGGAAAGAGGTCGAC +
Preference number: 4 (lower is better)
Translates to: GSPMGYTQETPPARPEGSLCSCP*DWKEVD
Trigger: GTCGACCTCTTTCCAATCCCAGGGACAGCTACAGAG...CGACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CACGTGGGCCCCGTTTACCTTCAGAGGAGTCAGGACAACTCGAGGCAGCATCACCTCTGTAGCTGTCCCTaGGATTGGAAAGAGGTCGAC +
Preference number: 4 (lower is better)
Translates to: HVGPVYLQRSQDNSRQHHLCSCP*DWKEVD
Trigger: GTCGACCTCTTTCCAATCCCAGGGACAGCTACAGAG...GTGATGCTGCCTCGAGTTGTCCTGACTCCTCTGAAGGTAAACGGGGCCCACGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644587.1
CDS-3UTR CCA 90 bp TGTAGGAGGAGAGATGTGAAAAGCAAGATGCGTTTGCTCGGTGGCATGTGGGCACTCTCGCCATCGGCGTaGCAGCCCGAGAACCCTGAT +
Preference number: 4 (lower is better)
Translates to: CRRRDVKSKMRLLGGMWALSPSA*QPENPD
Trigger: ATCAGGGTTCTCGGGCTGCCACGCCGATGGCGAGAG...TGCCCACATGCCACCGAGCAAACGCATCTTGCTTTTCACATCTCTCCTCCTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000651418.1
CDS-3UTR CCA 90 bp GTGACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCTGCTGGGTGACCTCGGCCTaGCCACGAATAGCAGCGCTG +
Preference number: 4 (lower is better)
Translates to: VTEGFSSVNFGGRQECSCWVTSA*PRIAAL
Trigger: CAGCGCTGCTATTCGTGGCCAGGCCGAGGTCACCCA...GCAGGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGTCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
CDS-3UTR CCA 90 bp GCCTTGGGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGCTTCATTTGACCTGTaGCTGGCTTCCGGAAGCCTC +
Preference number: 4 (lower is better)
Translates to: ALGSPMGYTQETPPARPEASFDL*LASGSL
Trigger: GAGGCTTCCGGAAGCCAGCCACAGGTCAAATGAAGC...TTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCCCAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
CDS-3UTR CCA 90 bp GGGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCATTTCAGCCTCCTCCTaGCCCACGTTCTGCTGCAAT +
Preference number: 4 (lower is better)
Translates to: GQPNGLYPGNPSSKTRRVISASS*PTFCCN
Trigger: ATTGCAGCAGAACGTGGGCCAGGAGGAGGCTGAAAT...GACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp AGGTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCATTTCAGCCTCCTCCTaGCCCACGTTCTGCTGCAAT +
Preference number: 4 (lower is better)
Translates to: RSAGAPAPWWAMPGVTLTISASS*PTFCCN
Trigger: ATTGCAGCAGAACGTGGGCCAGGAGGAGGCTGAAAT...GGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp AGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCCAAGTGACAGAGGGCTTTAGCGATTCCTTCTGGCTCTaGTTCGGAGATCTGGCCGAG +
Preference number: 4 (lower is better)
Translates to: RKPLQQDQKGRQVTEGFSDSFWL*FGDLAE
Trigger: CTCGGCCAGATCTCCGAACCAGAGCCAGAAGGAATC...GCTAAAGCCCTCTGTCACTTGGCGACCCTTCTGGTCTTGCTGGAGGGGTTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp AGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTAAACACTGCTCAGCCCTGCTaGGTCAGTCTTAGCCTCCCC +
Preference number: 4 (lower is better)
Translates to: REEEDWTCLGPCSRSLVNTAQPC*VSLSLP
Trigger: GGGGAGGCTAAGACTGACCCAGCAGGGCTGAGCAGT...GTTTACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp CAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACAGCAGATGTGCCTGGCAGATaGGGACTGCTCAGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: QPGRSQVNHFTLTSSSTADVPGR*GLLSPA
Trigger: AGCAGGGCTGAGCAGTCCCCATCTGCCAGGCACATC...TGCTGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp GGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGGCTAGGAATTCTGTCTaGAGATGCAGAGGCACGTGC +
Preference number: 4 (lower is better)
Translates to: GSPMGYTQETPPARPEGSARNSV*RCRGTC
Trigger: GCACGTGCCTCTGCATCTCCAGACAGAATTCCTAGC...CGACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTAAAGTTGAATCCGGATaGGCGGGACTTTGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: VSRCTSPLVGNARSYFNPKVESG*AGLWAP
Trigger: AGGAGCCCAAAGTCCCGCCCATCCGGATTCAACTTT...AGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GGGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCATGGCAGTTCCGGCCTaGGTATGCTCCCCATTTAGA +
Preference number: 4 (lower is better)
Translates to: GQPNGLYPGNPSSKTRRVMAVPA*VCSPFR
Trigger: TCTAAATGGGGAGCATACCCAGGCCGGAACTGCCAT...GACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GTGACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCTGCAAGGCCTGGCATGGCTaGTCCCCAGTGGGAGCAACG +
Preference number: 4 (lower is better)
Translates to: VTEGFSSVNFGGRQECSCKAWHG*SPVGAT
Trigger: CGTTGCTCCCACTGGGGACCAGCCATGCCAGGCCTT...GCAGGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGTCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GTGACAGGTGGTGACCCTGGAGCCAGATCTGGAAGGCCTTCCTGGGGGCTGCCCCATCATTCGATGGGATaGGTATCCAATGCAAAGAAC +
Preference number: 4 (lower is better)
Translates to: VTGGDPGARSGRPSWGLPHHSMG*VSNAKN
Trigger: GTTCTTTGCATTGGATACCCATCCCATCGAATGATG...GGGCAGCCCCCAGGAAGGCCTTCCAGATCTGGCTCCAGGGTCACCACCTGTCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GGGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCTGGTACTCAGTACTaGCCAGCAGTAGGGAATCTG +
Preference number: 4 (lower is better)
Translates to: GQPNGLYPGNPSSKTRRVAGTQY*PAVGNL
Trigger: CAGATTCCCTACTGCTGGCCAGTACTGAGTACCAGC...GACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCACACGGCTCTTGGCTaGTACTCAGTACTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: GDPTGHRATWQVTSQSFHHTALG*YSVLAS
Trigger: GCTGGCCAGTACTGAGTACCAGCCAAGAGCCGTGTG...GTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GGCTGCCCAGGGAACTCACCCATGAATCCAGAAGCACTTAACACTGGTGGTGGTCACACGGCTCTTGGCTaGTACTCAGTACTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: GCPGNSPMNPEALNTGGGHTALG*YSVLAS
Trigger: GCTGGCCAGTACTGAGTACCAGCCAAGAGCCGTGTG...ACCACCACCAGTGTTAAGTGCTTCTGGATTCATGGGTGAGTTCCCTGGGCAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCCAAGCCTTGCAATTCTTTTaGGGTGCTCCAGGAGCCTGG +
Preference number: 4 (lower is better)
Translates to: AQWVIPRKPLQQDQKGRQALQFF*GAPGAW
Trigger: CCAGGCTCCTGGAGCACCCCAAAAGAATTGCAAGGC...TTGGCGACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp AGGTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCCCACTGGGAAAAACTaGAGGGATCTCAGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: RSAGAPAPWWAMPGVTLTPTGKN*RDLSRK
Trigger: CTTCCTGCTGAGATCCCTCCAGTTTTTCCCAGTGGG...GGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GGGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGTACCCCACCAGACATaGAGTTTGTGCTTGGTCCCA +
Preference number: 4 (lower is better)
Translates to: GQPNGLYPGNPSSKTRRVVPHQT*SLCLVP
Trigger: TGGGACCAAGCACAAACTCCATGTCTGGTGGGGTAC...GACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGAAAGGCATGTGGCTTTaGAGCCCAGTCTTCCCTTGG +
Preference number: 4 (lower is better)
Translates to: GSPMGYTQETPPARPEGSKGMWL*SPVFPW
Trigger: CCAAGGGAAGACTGGGCTCCAAAGCCACATGCCTTT...CGACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGCCAACAAAGGCATGTaGCTTTGGAGCCCAGTCTTC +
Preference number: 4 (lower is better)
Translates to: VSRCTSPLVGNARSYFNPANKGM*LWSPVF
Trigger: GAAGACTGGGCTCCAAAGCCACATGCCTTTGTTGGC...AGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GGGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCTGCTTGATGCTGAGTTaGGAGGGGAGAGAAGAAGGC +
Preference number: 4 (lower is better)
Translates to: GQPNGLYPGNPSSKTRRVCLMLS*EGREEG
Trigger: GCCTTCTTCTCTCCCCTCCCAACTCAGCATCAAGCA...GACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GAGAATGCAACCTTCTTGCTTCAGTTTCAAGTCCCTCTGGGAGTCAGGCAGTCCAGAGCTCAGGCTGGCTaGCCTTGGGCAGCCCAATGG +
Preference number: 4 (lower is better)
Translates to: ENATFLLQFQVPLGVRQSRAQAG*PWAAQW
Trigger: CCATTGGGCTGCCCAAGGCCAGCCAGCCTGAGCTCT...GGACTGCCTGACTCCCAGAGGGACTTGAAACTGAAGCAAGAAGGTTGCATTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGTGCTCACCTGCAAACATCTaGACGGCTGACTCACAAGGT +
Preference number: 4 (lower is better)
Translates to: AGAPAPWWAMPGVTLTLCSPANI*TADSQG
Trigger: ACCTTGTGAGTCAGCCGTCCAGATGTTTGCAGGTGA...GCACAGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CCAGCAGAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGGCATCGGGCAACCTaGCAGGTCACAAGTCAATCA +
Preference number: 4 (lower is better)
Translates to: PAEGRRGLDMFGPLFPVFGHRAT*QVTSQS
Trigger: TGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCC...AAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTCTGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp CCAGCCGGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCAAGGCAGGAGCAGGCATaGCTTTGTTTCTTCCCAAAC +
Preference number: 4 (lower is better)
Translates to: PAGDPTGHRATWQVTSQSRQEQA*LCFFPN
Trigger: GTTTGGGAAGAAACAAAGCCATGCCTGCTCCTGCCT...TGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACCGGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR TCA 90 bp CAAGTGACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCGCAGCCCGAGAACCCTaGTGCAGATTCCACGTGGGC +
Preference number: 4 (lower is better)
Translates to: QVTEGFSSVNFGGRQECSAAREP*CRFHVG
Trigger: GCCCACGTGGAATCTGCATCAGGGTTCTCGGGCTGC...GGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGTCACTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
CDS-3UTR TCA 90 bp AGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTAAACCTGTTGCGCTTCATTTaGCCTGTGGCTGGCTTCCGG +
Preference number: 4 (lower is better)
Translates to: REEEDWTCLGPCSRSLVNLLRFI*PVAGFR
Trigger: CCGGAAGCCAGCCACAGGTCAAATGAAGCGCAACAG...GTTTACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000651418.1
CDS-3UTR TCA 90 bp GGCTGCCCAGGGAACTCACCCATGAATCCAGAAGCACTTAACACTGGTGGTGGTCACGGAGGTTGGTGTTaGCAAGAATGGACCCAGGTG +
Preference number: 4 (lower is better)
Translates to: GCPGNSPMNPEALNTGGGHGGWC*QEWTQV
Trigger: CACCTGGGTCCATTCTTGTCAACACCAACCTCCGTG...ACCACCACCAGTGTTAAGTGCTTCTGGATTCATGGGTGAGTTCCCTGGGCAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR TCA 90 bp CTTCCTGGGGGCTGCCCAGGGAACTCACCCATGAATCCAGAAGCACTTAACACTCACGGAGGTTGGTGTTaGCAAGAATGGACCCAGGTG +
Preference number: 4 (lower is better)
Translates to: LPGGCPGNSPMNPEALNTHGGWC*QEWTQV
Trigger: CACCTGGGTCCATTCTTGTCAACACCAACCTCCGTG...AGTGTTAAGTGCTTCTGGATTCATGGGTGAGTTCCCTGGGCAGCCCCCAGGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR TCA 90 bp AAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGGTATTGCTGTGACAGGTCACGGAGGTTGGTGTTaGCAAGAATGGACCCAGGTG +
Preference number: 4 (lower is better)
Translates to: KGASQSQESMVPGIAVTGHGGWC*QEWTQV
Trigger: CACCTGGGTCCATTCTTGTCAACACCAACCTCCGTG...ACCTGTCACAGCAATACCTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR TCA 90 bp CTTTCACATACACAGGTGCGTGGAGATGCCCACTCCCATAGGGTCCAAAGTGACTTAGTGCACTGCTGCTaGGACGCAACAGGCCATCCG +
Preference number: 4 (lower is better)
Translates to: LSHTQVRGDAHSHRVQSDLVHCC*DATGHP
Trigger: CGGATGGCCTGTTGCGTCTCAGCAGCAGTGCACTAA...GTCACTTTGGACCCTATGGGAGTGGGCATCTCCACGCACCTGTGTATGTGAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp AGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTAAACTTAGTGCACTGCTGCTaGGACGCAACAGGCCATCCG +
Preference number: 4 (lower is better)
Translates to: REEEDWTCLGPCSRSLVNLVHCC*DATGHP
Trigger: CGGATGGCCTGTTGCGTCTCAGCAGCAGTGCACTAA...GTTTACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR TCA 90 bp GCCGGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACACAAGCCACTTTTaGTTTCAGCCTCCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: AGDPTGHRATWQVTSQSFHTSHF*FQPPPG
Trigger: GCCAGGAGGAGGCTGAAATCAAAAGTGGCTTGTGTG...AAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACCGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR TCA 90 bp GTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTACGCTGTATACGCACTaGTTCTCCTGGGACACACAA +
Preference number: 4 (lower is better)
Translates to: VSRCTSPLVGNARSYFNPTLYTH*FSWDTQ
Trigger: TTGTGTGTCCCAGGAGAATCAGTGCGTATACAGCGT...AGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp GGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGGTAGAGGGGAACATCTaGGGCCACAGATTTTGCATC +
Preference number: 4 (lower is better)
Translates to: GSPMGYTQETPPARPEGSVEGNI*GHRFCI
Trigger: GATGCAAAATCTGTGGCCTCAGATGTTCCCCTCTAC...CGACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp AGGTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCGGGTGGTTTGATACGTaGAAGTTGAATCCGGATGGG +
Preference number: 4 (lower is better)
Translates to: RSAGAPAPWWAMPGVTLTGWFDT*KLNPDG
Trigger: CCCATCCGGATTCAACTTTCACGTATCAAACCACCC...GGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp TCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGCCACCCAGGGTGGTTTaGTACGTGAAAGTTGAATCC +
Preference number: 4 (lower is better)
Translates to: SAGAPAPWWAMPGVTLTLPPRVV*YVKVES
Trigger: GGATTCAACTTTCACGTATCAAACCACCCTGGGTGG...CAGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp TCAATCATTTCACCCTCACGTCGAGCAGCACAGCACTCAGTGGCTCTGACAACAACTCCGTGGTGGGGATaGTCCGGGGGCATATCTGGT +
Preference number: 4 (lower is better)
Translates to: SIISPSRRAAQHSVALTTTPWWG*SGGISG
Trigger: ACCAGATATGCCCCCGGATCATCCCCACCACGGAGT...TGTTGTCAGAGCCACTGAGTGCTGTGCTGCTCGACGTGAGGGTGAAATGATTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp GCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCCAAACATCCGGATGCAACTaGGGCTGCTCCACTAATCTC +
Preference number: 4 (lower is better)
Translates to: AQWVIPRKPLQQDQKGRQTSGCN*GCSTNL
Trigger: GAGATTAGTGGAGCAGCCTCAGTTGCATCCGGATGT...TTGGCGACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp GCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCCAATGGCACAGTCCAGAGTaGAGTAAGGCTGTCAAGAGG +
Preference number: 4 (lower is better)
Translates to: AQWVIPRKPLQQDQKGRQWHSPE*SKAVKR
Trigger: CCTCTTGACAGCCTTACTTCACTCTGGACTGTGCCA...TTGGCGACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp GCCTTGGGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAATGGCACAGTCCAGAGTaGAGTAAGGCTGTCAAGAGG +
Preference number: 4 (lower is better)
Translates to: ALGSPMGYTQETPPARPEWHSPE*SKAVKR
Trigger: CCTCTTGACAGCCTTACTTCACTCTGGACTGTGCCA...TTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCCCAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp GGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCTGTCCTCCGTGAGGTaGCCTTCAAAGTCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: GDPTGHRATWQVTSQSFHLSSVR*PSKSEA
Trigger: AGCCTCTGACTTTGAAGGTCACCTCACGGAGGACAG...GTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp GAGAATGCAACCTTCTTGCTTCAGTTTCAAGTCCCTCTGGGAGTCAGGCAGTCCGTTAGTGGCCTCCACTaGGGACCCAGGCATGGACAG +
Preference number: 4 (lower is better)
Translates to: ENATFLLQFQVPLGVRQSVSGLH*GPRHGQ
Trigger: CTGTCCATGCCTGGGTCCTCAGTGGAGGCCACTAAC...GGACTGCCTGACTCCCAGAGGGACTTGAAACTGAAGCAAGAAGGTTGCATTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp CAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACAGCACCTGTAACATTGCTCTaGTCACCCAGGGCCCGACCT +
Preference number: 4 (lower is better)
Translates to: QPGRSQVNHFTLTSSSTAPVTLL*SPRARP
Trigger: AGGTCGGGCCCTGGGTGATCAGAGCAATGTTACAGG...TGCTGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp CAGGTCCAGCCGGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCATTCAAGGTTCCAAATaGTCCTGTGGGTTAGTGGAT +
Preference number: 4 (lower is better)
Translates to: QVQPVTQQGIGQPGRSQVIQGSK*SCGLVD
Trigger: ATCCACTAACCCACAGGATCATTTGGAACCTTGAAT...GACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACCGGCTGGACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp GCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGTGCAAACATCTGGACGGCTaGCTCACAAGGTCTACAGAT +
Preference number: 4 (lower is better)
Translates to: AGAPAPWWAMPGVTLTLCKHLDG*LTRSTD
Trigger: ATCTGTAGACCTTGTGAGTCAGCCGTCCAGATGTTT...GCACAGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp CCGGTCTTTGGTAAACAGACGCTTAAGTTGACAACTTGGACTTGGCCAATACTGAGCAGGTCCAGCCGGTaGCCCAACAGGGCATCGGGC +
Preference number: 4 (lower is better)
Translates to: PVFGKQTLKLTTWTWPILSRSSR*PNRASG
Trigger: GCCCGATGCCCTGTTGGGTCACCGGCTGGACCTGCT...CAGTATTGGCCAAGTCCAAGTTGTCAACTTAAGCGTCTGTTTACCAAAGACCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR TCA 90 bp TCAGACACAAGCTGTAGACTAACAGACCACTCCCAAGCTTACAGCAGGTTCATAGCTCTGCTGAGGGACTaGGACAGGACCGACGGCGGG +
Preference number: 4 (lower is better)
Translates to: SDTSCRLTDHSQAYSRFIALLRD*DRTDGG
Trigger: CCCGCCGTCGGTCCTGTCTCAGTCCCTCAGCAGAGC...TATGAACCTGCTGTAAGCTTGGGAGTGGTCTGTTAGTCTACAGCTTGTGTCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542461.5
ENST00000646367.1
CDS-3UTR TCA 90 bp TGTAATCCATCCCAGTGCTTTGTGAAGCTGTGGTGGGAAGATCACTTGAGGCCAACTCCCCCGGGTGAATaGACGAAGCTGCCCCAGACC +
Preference number: 4 (lower is better)
Translates to: CNPSQCFVKLWWEDHLRPTPPGE*TKLPQT
Trigger: GGTCTGGGGCAGCTTCGTTCATTCACCCGGGGGAGT...TGGCCTCAAGTGATCTTCCCACCACAGCTTCACAAAGCACTGGGATGGATTACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000645035.1
ENST00000649901.1
CDS-3UTR TCA 90 bp ACCTGTAATCCATCCCAGTGCTTTGTGAAGCTGTGGTGGGAAGATCACTTGAGGCCCAACTCCCCCGGGTaGATGAACGAAGCTGCCCCA +
Preference number: 4 (lower is better)
Translates to: TCNPSQCFVKLWWEDHLRPNSPG*MNEAAP
Trigger: TGGGGCAGCTTCGTTCATTCACCCGGGGGAGTTGGG...CCTCAAGTGATCTTCCCACCACAGCTTCACAAAGCACTGGGATGGATTACAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000645035.1
ENST00000649901.1
CDS-3UTR GCA 90 bp GGGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCAGGAAGAGGAGCTGCTaGTGGAAGTGTGATGGTAAG +
Preference number: 4 (lower is better)
Translates to: GQPNGLYPGNPSSKTRRVRKRSC*WKCDGK
Trigger: CTTACCATCACACTTCCAGCAGCAGCTCCTCTTCCT...GACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp TCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGGAGCGTTTCTTAAAATaGCCATCTCGCTGTCGGGTG +
Preference number: 4 (lower is better)
Translates to: SAGAPAPWWAMPGVTLTLERFLK*PSRCRV
Trigger: CACCCGACAGCGAGATGGGCATTTTAAGAAACGCTC...CAGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp TCAATCATTTCACCCTCACGTCGAGCAGCACAGCACTCAGTGGCTCTGACAACAGGGACTGCTCAGCCCTaGTGGGTCAGTCTTAGCCTC +
Preference number: 4 (lower is better)
Translates to: SIISPSRRAAQHSVALTTGTAQP*WVSLSL
Trigger: GAGGCTAAGACTGACCCAGCAGGGCTGAGCAGTCCC...TGTTGTCAGAGCCACTGAGTGCTGTGCTGCTCGACGTGAGGGTGAAATGATTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp CAAGGCAAGGGAAAACACACACAGGGGCATCTACTTGCTGGAAACATGTTGGGACTGGCAGATGGGGACTaGTCAGCCCTGCTGGGTCAG +
Preference number: 4 (lower is better)
Translates to: QGKGKHTQGHLLAGNMLGLADGD*SALLGQ
Trigger: CTGACCCAGCAGGGCTGAGCAGTCCCCATCTGCCAG...TCCCAACATGTTTCCAGCAAGTAGATGCCCCTGTGTGTGTTTTCCCTTGCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR GCA 90 bp AAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGGTATTGCTGTGACAGGTAGATGCAGAGGCACGTaGCAAGTTGTCTGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: KGASQSQESMVPGIAVTGRCRGT*QVVWLS
Trigger: GCTGAGCCAGACAACTTGGCACGTGCCTCTGCATCT...ACCTGTCACAGCAATACCTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR GCA 90 bp GGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACAAGATGCAGAGGCACGTaGCAAGTTGTCTGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: GQPGRSQVNHFTLTSSSTRCRGT*QVVWLS
Trigger: GCTGAGCCAGACAACTTGGCACGTGCCTCTGCATCT...TGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR GCA 90 bp CAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGCTTTTCGGGAAAGGATaGAGAGGCCGCCTGCTCAAA +
Preference number: 4 (lower is better)
Translates to: QGIGQPGRSQVNHFTLTSLFGKG*RGRLLK
Trigger: TTTGAGCAGGCGGCCTCTGCATCCTTTCCCGAAAAG...CGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR GCA 90 bp GAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTAAAACGGGCTTTAATGTCTaGGAGGGTCCTGGCGCCAGT +
Preference number: 4 (lower is better)
Translates to: EGRRGLDMFGPLFPVFGKTGFNV*EGPGAS
Trigger: ACTGGCGCCAGGACCCTCGCAGACATTAAAGCCCGT...TTTACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR GCA 90 bp AAAAGTACGTCAAAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGGTATTCACTGCTGCTGCCTCTaGCACCTCCCTCATCGGTGG +
Preference number: 4 (lower is better)
Translates to: KSTSKGASQSQESMVPGIHCCCL*HLPHRW
Trigger: CCACCGATGAGGGAGGTGGCAGAGGCAGCAGCAGTG...AATACCTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTTTGACGTACTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp CAAGTGACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCTACACTTTCCAGGGGTaGTCGGGCCTCCCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: QVTEGFSSVNFGGRQECSYTFQG*SGLPWA
Trigger: AGCCCAGGGGAGGCCCGAGCACCCCTGGAAAGTGTA...GGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGTCACTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GGGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCCCTGTTGACAGTAACTaGCATTGCTGTCACTGCCTC +
Preference number: 4 (lower is better)
Translates to: GQPNGLYPGNPSSKTRRVPVDSN*HCCHCL
Trigger: GAGGCAGTGACAGCAATGGCAGTTACTGTCAACAGG...GACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp TCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGACCGTGAGGACTCAGTaGTTCAGAGTCTCCGTTGAT +
Preference number: 4 (lower is better)
Translates to: SAGAPAPWWAMPGVTLTLTVRTQ*FRVSVD
Trigger: ATCAACGGAGACTCTGAAGCACTGAGTCCTCACGGT...CAGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTCTACCCTGCAGCAACTaGATCACAAGTGGGTTAGTG +
Preference number: 4 (lower is better)
Translates to: VSRCTSPLVGNARSYFNPLPCSN*ITSGLV
Trigger: CACTAACCCACTTGTGATGCAGTTGCTGCAGGGTAG...AGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp AGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCCAAGTGACAGAGGGCTTTAGCAGGGGCAAGCTACCCTaGAGCAACTGCATCACAAGT +
Preference number: 4 (lower is better)
Translates to: RKPLQQDQKGRQVTEGFSRGKLP*SNCITS
Trigger: ACTTGTGATGCAGTTGCTGCAGGGTAGCTTGCCCCT...GCTAAAGCCCTCTGTCACTTGGCGACCCTTCTGGTCTTGCTGGAGGGGTTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTAGTTCCAGGGGACTATaGCCAGTAGCTTTCCTGTTC +
Preference number: 4 (lower is better)
Translates to: VSRCTSPLVGNARSYFNPSSRGL*PVAFLF
Trigger: GAACAGGAAAGCTACTGGGCATAGTCCCCTGGAACT...AGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GAGATGCCCACTCCCATAGGGTCCAAAGTGACAGGGAGGATGTCAAGCAGAGGACACACTGGAGCGAGATaGTTTCCACCGTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: EMPTPIGSKVTGRMSSRGHTGAR*FPPCCC
Trigger: ACAGCAGCACGGTGGAAAGCATCTCGCTCCAGTGTG...TCCTCTGCTTGACATCCTCCCTGTCACTTTGGACCCTATGGGAGTGGGCATCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp CTTCCTGGGGGCTGCCCAGGGAACTCACCCATGAATCCAGAAGCACTTAACACTCACACTGGAGCGAGATaGTTTCCACCGTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: LPGGCPGNSPMNPEALNTHTGAR*FPPCCC
Trigger: ACAGCAGCACGGTGGAAAGCATCTCGCTCCAGTGTG...AGTGTTAAGTGCTTCTGGATTCATGGGTGAGTTCCCTGGGCAGCCCCCAGGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACAGCACTCAGTCATCAGGCTCTGTCTTaGAGGAGAGCTCAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: GRSQVNHFTLTSSSTALSHQALS*RRAQAG
Trigger: GCCAGCCTGAGCTCTCCTGCAAGACAGAGCCTGATG...ACTGAGTGCTGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp CTTTCACATACACAGGTGCGTGGAGATGCCCACTCCCATAGGGTCCAAAGTGACCATCAGGCTCTGTCTTaGAGGAGAGCTCAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: LSHTQVRGDAHSHRVQSDHQALS*RRAQAG
Trigger: GCCAGCCTGAGCTCTCCTGCAAGACAGAGCCTGATG...GTCACTTTGGACCCTATGGGAGTGGGCATCTCCACGCACCTGTGTATGTGAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp CAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAAAGCAAGATGCGTTTaGTCGGTGGCATGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: QGIGQPGRSQVNHFTLTSKARCV*SVACGQ
Trigger: CTGCCCACATGCCACCGAGCAAACGCATCTTGCTTT...CGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR GCA 90 bp ACCTGTAATCCATCCCAGTGCTTTGTGAAGCTGTGGTGGGAAGATCACTTGAGGCAGACCCCCAGACGCTaGCAAATAGTGGGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: TCNPSQCFVKLWWEDHLRQTPRR*QIVGEG
Trigger: CCCCTCCCCCACTATTTGGCAGCGTCTGGGGGTCTG...CCTCAAGTGATCTTCCCACCACAGCTTCACAAAGCACTGGGATGGATTACAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000645035.1
ENST00000649901.1
CDS-3UTR GCA 90 bp CAAGGCAAGGGAAAACACACACAGGGGCATCTACTTGCTGGAAACATGTTGGGACAGACCCCCAGACGCTaGCAAATAGTGGGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: QGKGKHTQGHLLAGNMLGQTPRR*QIVGEG
Trigger: CCCCTCCCCCACTATTTGGCAGCGTCTGGGGGTCTG...TCCCAACATGTTTCCAGCAAGTAGATGCCCCTGTGTGTGTTTTCCCTTGCCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000646985.1
CDS-3UTR CCA 90 bp GTCAAAAGTACGTCAAAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGGTTCCCTCCACTGTAGCTaGATGGCGAGACCACTGCAG +
Preference number: 4 (lower is better)
Translates to: VKSTSKGASQSQESMVPGSLHCS*MARPLQ
Trigger: CTGCAGTGGTCTCGCCATCCAGCTACAGTGGAGGGA...ACCTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTTTGACGTACTTTTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp CAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACAGCATCCCTCCACTGTAGCTaGATGGCGAGACCACTGCAG +
Preference number: 4 (lower is better)
Translates to: QPGRSQVNHFTLTSSSTASLHCS*MARPLQ
Trigger: CTGCAGTGGTCTCGCCATCCAGCTACAGTGGAGGGA...TGCTGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp AGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCCAAGTGACAGAGGGCTTTAGCAGCTGTCCCTGGGATTaGAAAGAGGTCGACTCTGAG +
Preference number: 4 (lower is better)
Translates to: RKPLQQDQKGRQVTEGFSSCPWD*KEVDSE
Trigger: CTCAGAGTCGACCTCTTTCCAATCCCAGGGACAGCT...GCTAAAGCCCTCTGTCACTTGGCGACCCTTCTGGTCTTGCTGGAGGGGTTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GCCTTGGGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAACTCTGTAGCTGTCCCTaGGATTGGAAAGAGGTCGAC +
Preference number: 4 (lower is better)
Translates to: ALGSPMGYTQETPPARPELCSCP*DWKEVD
Trigger: GTCGACCTCTTTCCAATCCCAGGGACAGCTACAGAG...TTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCCCAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp AGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCCAAGTGACAGAGGGCTTTAGCGATGCAGATTCCACGTaGGCCCCGTTTACCTTCAGA +
Preference number: 4 (lower is better)
Translates to: RKPLQQDQKGRQVTEGFSDADST*APFTFR
Trigger: TCTGAAGGTAAACGGGGCCCACGTGGAATCTGCATC...GCTAAAGCCCTCTGTCACTTGGCGACCCTTCTGGTCTTGCTGGAGGGGTTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp TTCATTAGACCCACAGCTCTCCACATCAGCCGTGTCCTCTGGCTCCTCTCCCTCGATGCAGATTCCACGTaGGCCCCGTTTACCTTCAGA +
Preference number: 4 (lower is better)
Translates to: FIRPTALHISRVLWLLSLDADST*APFTFR
Trigger: TCTGAAGGTAAACGGGGCCCACGTGGAATCTGCATC...GAGGGAGAGGAGCCAGAGGACACGGCTGATGTGGAGAGCTGTGGGTCTAATGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644587.1
CDS-3UTR CCA 90 bp TTTGTTTCTTCCCAAACCTGCCTGATGTCAAAAGTACGTCAAAAGGAGCCTCACAGCCGCTGCTGCTGCTaGACGGGCTGCCGCTCTCGC +
Preference number: 4 (lower is better)
Translates to: FVSSQTCLMSKVRQKEPHSRCCC*TGCRSR
Trigger: GCGAGAGCGGCAGCCCGTCCAGCAGCAGCAGCGGCT...GTGAGGCTCCTTTTGACGTACTTTTGACATCAGGCAGGTTTGGGAAGAAACAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000651418.1
CDS-3UTR CCA 90 bp GAGATGCCCACTCCCATAGGGTCCAAAGTGACAGGGAGGATGTCAAGCAGAGGACATTTGACCTGTGGCTaGCTTCCGGAAGCCTCTCAG +
Preference number: 4 (lower is better)
Translates to: EMPTPIGSKVTGRMSSRGHLTCG*LPEASQ
Trigger: CTGAGAGGCTTCCGGAAGCCAGCCACAGGTCAAATG...TCCTCTGCTTGACATCCTCCCTGTCACTTTGGACCCTATGGGAGTGGGCATCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
CDS-3UTR CCA 90 bp CTTCCTGGGGGCTGCCCAGGGAACTCACCCATGAATCCAGAAGCACTTAACACTCATTTGACCTGTGGCTaGCTTCCGGAAGCCTCTCAG +
Preference number: 4 (lower is better)
Translates to: LPGGCPGNSPMNPEALNTHLTCG*LPEASQ
Trigger: CTGAGAGGCTTCCGGAAGCCAGCCACAGGTCAAATG...AGTGTTAAGTGCTTCTGGATTCATGGGTGAGTTCCCTGGGCAGCCCCCAGGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000651418.1
CDS-3UTR CCA 90 bp GACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTGCTTCATTTGACCTGTaGCTGGCTTCCGGAAGCCTC +
Preference number: 4 (lower is better)
Translates to: DPTGHRATWQVTSQSFHPASFDL*LASGSL
Trigger: GAGGCTTCCGGAAGCCAGCCACAGGTCAAATGAAGC...AGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000651418.1
CDS-3UTR CCA 90 bp GCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCCAAATTTCAGCCTCCTCCTaGCCCACGTTCTGCTGCAAT +
Preference number: 4 (lower is better)
Translates to: AQWVIPRKPLQQDQKGRQISASS*PTFCCN
Trigger: ATTGCAGCAGAACGTGGGCCAGGAGGAGGCTGAAAT...TTGGCGACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp AGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTAAACCATCTCGCTGTCGGGTaGCTGGACCACGCTGTATAC +
Preference number: 4 (lower is better)
Translates to: REEEDWTCLGPCSRSLVNHLAVG*LDHAVY
Trigger: GTATACAGCGTGGTCCAGCCACCCGACAGCGAGATG...GTTTACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp CAGAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTAGATTCCTTCTGGCTCTaGTTCGGAGATCTGGCCGAG +
Preference number: 4 (lower is better)
Translates to: QREEEDWTCLGPCSRSLVDSFWL*FGDLAE
Trigger: CTCGGCCAGATCTCCGAACCAGAGCCAGAAGGAATC...TACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp TGTAGGAGGAGAGATGTGAAAAGCAAGATGCGTTTGCTCGGTGGCATGTGGGCAACTGCTCAGCCCTGCTaGGTCAGTCTTAGCCTCCCC +
Preference number: 4 (lower is better)
Translates to: CRRRDVKSKMRLLGGMWATAQPC*VSLSLP
Trigger: GGGGAGGCTAAGACTGACCCAGCAGGGCTGAGCAGT...TGCCCACATGCCACCGAGCAAACGCATCTTGCTTTTCACATCTCTCCTCCTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp GACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTAGCCACAGACTCAACTaGGAATTCGGGACCCTCCAG +
Preference number: 4 (lower is better)
Translates to: DPTGHRATWQVTSQSFHPSHRLN*EFGTLQ
Trigger: CTGGAGGGTCCCGAATTCCCAGTTGAGTCTGTGGCT...AGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp GAGATGCCCACTCCCATAGGGTCCAAAGTGACAGGGAGGATGTCAAGCAGAGGAAGCCACAGACTCAACTaGGAATTCGGGACCCTCCAG +
Preference number: 4 (lower is better)
Translates to: EMPTPIGSKVTGRMSSRGSHRLN*EFGTLQ
Trigger: CTGGAGGGTCCCGAATTCCCAGTTGAGTCTGTGGCT...TCCTCTGCTTGACATCCTCCCTGTCACTTTGGACCCTATGGGAGTGGGCATCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCCAAGCTAGGAATTCTGTCTaGAGATGCAGAGGCACGTGC +
Preference number: 4 (lower is better)
Translates to: AQWVIPRKPLQQDQKGRQARNSV*RCRGTC
Trigger: GCACGTGCCTCTGCATCTCCAGACAGAATTCCTAGC...TTGGCGACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCCAAAAAGTTGAATCCGGATaGGCGGGACTTTGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: AQWVIPRKPLQQDQKGRQKVESG*AGLWAP
Trigger: AGGAGCCCAAAGTCCCGCCCATCCGGATTCAACTTT...TTGGCGACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp AGTTCAGGTAGGTTAACTCCCTTGGTGGAGAATGCAACCTTCTTGCTTCAGTTTCACCTCCCTCATCGGTaGCCCCGCCGCCACCTCCAC +
Preference number: 4 (lower is better)
Translates to: SSGRLTPLVENATFLLQFHLPHR*PRRHLH
Trigger: GTGGAGGTGGCGGCGGGGCCACCGATGAGGGAGGTG...AAACTGAAGCAAGAAGGTTGCATTCTCCACCAAGGGAGTTAACCTACCTGAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp ATGTCAAAAGTACGTCAAAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGGGAGCAACGGGGAGTTaGGAGGCATCTCCTAGCCCA +
Preference number: 4 (lower is better)
Translates to: MSKVRQKEPHSPRRAWSQGATGS*EASPSP
Trigger: TGGGCTAGGAGATGCCTCCCAACTCCCCGTTGCTCC...CTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTTTGACGTACTTTTGACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CTTGGTGGAGAATGCAACCTTCTTGCTTCAGTTTCAAGTCCCTCTGGGAGTCAGAAGGCCTGGCATGGCTaGTCCCCAGTGGGAGCAACG +
Preference number: 4 (lower is better)
Translates to: LGGECNLLASVSSPSGSQKAWHG*SPVGAT
Trigger: CGTTGCTCCCACTGGGGACCAGCCATGCCAGGCCTT...CTGACTCCCAGAGGGACTTGAAACTGAAGCAAGAAGGTTGCATTCTCCACCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CAAGTGACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCAAGGCCTGGCATGGCTaGTCCCCAGTGGGAGCAACG +
Preference number: 4 (lower is better)
Translates to: QVTEGFSSVNFGGRQECSKAWHG*SPVGAT
Trigger: CGTTGCTCCCACTGGGGACCAGCCATGCCAGGCCTT...GGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGTCACTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CAAGTGACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCAGTAGGGGCAAGGCCTaGCATGGCTGGTCCCCAGTG +
Preference number: 4 (lower is better)
Translates to: QVTEGFSSVNFGGRQECSSRGKA*HGWSPV
Trigger: CACTGGGGACCAGCCATGCCAGGCCTTGCCCCTACT...GGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGTCACTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CCAGCCGGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCAGTGAGGATTCAGGTGTaGAACTGGGGGTCACATTTA +
Preference number: 4 (lower is better)
Translates to: PAGDPTGHRATWQVTSQSVRIQV*NWGSHL
Trigger: TAAATGTGACCCCCAGTTCCACACCTGAATCCTCAC...TGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACCGGCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp AGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCCAAGTGACAGAGGGCTTTAGCCACTCCTCTCCAACCTaGGGCTCAACAGATGGTATG +
Preference number: 4 (lower is better)
Translates to: RKPLQQDQKGRQVTEGFSHSSPT*GSTDGM
Trigger: CATACCATCTGTTGAGCCCCAGGTTGGAGAGGAGTG...GCTAAAGCCCTCTGTCACTTGGCGACCCTTCTGGTCTTGCTGGAGGGGTTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp AAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGGTATTGCTGTGACAGGTCAGAGGCTGTATCCGTaGACTCACCGTGAGGACTCA +
Preference number: 4 (lower is better)
Translates to: KGASQSQESMVPGIAVTGQRLYP*THREDS
Trigger: TGAGTCCTCACGGTGAGTCCACGGATACAGCCTCTG...ACCTGTCACAGCAATACCTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCCAAGCTGGTACTCAGTACTaGCCAGCAGTAGGGAATCTG +
Preference number: 4 (lower is better)
Translates to: AQWVIPRKPLQQDQKGRQAGTQY*PAVGNL
Trigger: CAGATTCCCTACTGCTGGCCAGTACTGAGTACCAGC...TTGGCGACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGTGCATGCGTAGCGAGCCATaGCTCTGGTCTTTTGTAAGT +
Preference number: 4 (lower is better)
Translates to: AGAPAPWWAMPGVTLTLCMRSEP*LWSFVS
Trigger: ACTTACAAAAGACCAGAGCCATGGCTCGCTACGCAT...GCACAGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTGCCTTGCAATTCTTTTaGGGTGCTCCAGGAGCCTGG +
Preference number: 4 (lower is better)
Translates to: DPTGHRATWQVTSQSFHPALQFF*GAPGAW
Trigger: CCAGGCTCCTGGAGCACCCCAAAAGAATTGCAAGGC...AGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GAGATGCCCACTCCCATAGGGTCCAAAGTGACAGGGAGGATGTCAAGCAGAGGAGCCTTGCAATTCTTTTaGGGTGCTCCAGGAGCCTGG +
Preference number: 4 (lower is better)
Translates to: EMPTPIGSKVTGRMSSRGALQFF*GAPGAW
Trigger: CCAGGCTCCTGGAGCACCCCAAAAGAATTGCAAGGC...TCCTCTGCTTGACATCCTCCCTGTCACTTTGGACCCTATGGGAGTGGGCATCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCCAAGGTAGTAAGATCTCCTaGGCTCTTTCCTGGAGCAGC +
Preference number: 4 (lower is better)
Translates to: AQWVIPRKPLQQDQKGRQGSKIS*ALSWSS
Trigger: GCTGCTCCAGGAAAGAGCCCAGGAGATCTTACTACC...TTGGCGACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CTGGCATTTCTACTTAGTTCAGGTAGGTTAACTCCCTTGGTGGAGAATGCAACCTCGGGTCCGCAGGCCTaGGGCGCTGAAGGGTTGCAG +
Preference number: 4 (lower is better)
Translates to: LAFLLSSGRLTPLVENATSGPQA*GAEGLQ
Trigger: CTGCAACCCTTCAGCGCCCCAGGCCTGCGGACCCGA...GGTTGCATTCTCCACCAAGGGAGTTAACCTACCTGAACTAAGTAGAAATGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp AGTGGAAGACTGGCATTTCTACTTAGTTCAGGTAGGTTAACTCCCTTGGTGGAGTCGGGTCCGCAGGCCTaGGGCGCTGAAGGGTTGCAG +
Preference number: 4 (lower is better)
Translates to: SGRLAFLLSSGRLTPLVESGPQA*GAEGLQ
Trigger: CTGCAACCCTTCAGCGCCCCAGGCCTGCGGACCCGA...CTCCACCAAGGGAGTTAACCTACCTGAACTAAGTAGAAATGCCAGTCTTCCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CCAGCAGAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTCCCACTGGGAAAAACTaGAGGGATCTCAGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: PAEGRRGLDMFGPLFPVFPTGKN*RDLSRK
Trigger: CTTCCTGCTGAGATCCCTCCAGTTTTTCCCAGTGGG...AAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTCTGCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GGGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGTCCCAACTTCCCACTaGGAAAAACTGGAGGGATCT +
Preference number: 4 (lower is better)
Translates to: GQPNGLYPGNPSSKTRRVVPTSH*EKLEGS
Trigger: AGATCCCTCCAGTTTTTCCCAGTGGGAAGTTGGGAC...GACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp TCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGGTCCCAACTTCCCACTaGGAAAAACTGGAGGGATCT +
Preference number: 4 (lower is better)
Translates to: SAGAPAPWWAMPGVTLTLVPTSH*EKLEGS
Trigger: AGATCCCTCCAGTTTTTCCCAGTGGGAAGTTGGGAC...CAGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GAGATGCCCACTCCCATAGGGTCCAAAGTGACAGGGAGGATGTCAAGCAGAGGAAGCCCAGTCTTCCCTTaGAGTCTGTACCCCACCAGA +
Preference number: 4 (lower is better)
Translates to: EMPTPIGSKVTGRMSSRGSPVFP*SLYPTR
Trigger: TCTGGTGGGGTACAGACTCCAAGGGAAGACTGGGCT...TCCTCTGCTTGACATCCTCCCTGTCACTTTGGACCCTATGGGAGTGGGCATCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CAGAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTAAGCCCAGTCTTCCCTTaGAGTCTGTACCCCACCAGA +
Preference number: 4 (lower is better)
Translates to: QREEEDWTCLGPCSRSLVSPVFP*SLYPTR
Trigger: TCTGGTGGGGTACAGACTCCAAGGGAAGACTGGGCT...TACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CCAGCCGGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCAGAAAGTGATGCACTGTaGCTCGCACCAAAGTTTGCT +
Preference number: 4 (lower is better)
Translates to: PAGDPTGHRATWQVTSQSESDAL*LAPKFA
Trigger: AGCAAACTTTGGTGCGAGCCACAGTGCATCACTTTC...TGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACCGGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCCTTGGGCAGCCCAATaGGTTATACCCAGGAAACCC +
Preference number: 4 (lower is better)
Translates to: DPTGHRATWQVTSQSFHPPWAAQ*VIPRKP
Trigger: GGGTTTCCTGGGTATAACCCATTGGGCTGCCCAAGG...AGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTTGGGCAGCCCAATaGGTTATACCCAGGAAACCC +
Preference number: 4 (lower is better)
Translates to: GDPTGHRATWQVTSQSFHPWAAQ*VIPRKP
Trigger: GGGTTTCCTGGGTATAACCCATTGGGCTGCCCAAGG...GTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp AGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTAAACCAGGCTGGCTGGCCTTaGGCAGCCCAATGGGTTATA +
Preference number: 4 (lower is better)
Translates to: REEEDWTCLGPCSRSLVNQAGWP*AAQWVI
Trigger: TATAACCCATTGGGCTGCCCAAGGCCAGCCAGCCTG...GTTTACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp AGGTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCTGCTGGCTTCTTTCCTaGCCATCAACTCCCCAAAGT +
Preference number: 4 (lower is better)
Translates to: RSAGAPAPWWAMPGVTLTCWLLS*PSTPQS
Trigger: ACTTTGGGGAGTTGATGGCCAGGAAAGAAGCCAGCA...GGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GTGACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCTGCGCACCAGCCCCCTGGTaGGCAATGCCAGGAGTTACT +
Preference number: 4 (lower is better)
Translates to: VTEGFSSVNFGGRQECSCAPAPW*AMPGVT
Trigger: AGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGC...GCAGGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTGGGCATCGGGCAACCTaGCAGGTCACAAGTCAATCA +
Preference number: 4 (lower is better)
Translates to: DPTGHRATWQVTSQSFHPGHRAT*QVTSQS
Trigger: TGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCC...AGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp GGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACAGCACTCAGTGATGCGTTTGCTCGGTaGCATGTGGGCAGGCTGACT +
Preference number: 4 (lower is better)
Translates to: GRSQVNHFTLTSSSTALSDAFAR*HVGRLT
Trigger: AGTCAGCCTGCCCACATGCCACCGAGCAAACGCATC...ACTGAGTGCTGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACAGCAGATGCGTTTGCTCGGTaGCATGTGGGCAGGCTGACT +
Preference number: 4 (lower is better)
Translates to: QPGRSQVNHFTLTSSSTADAFAR*HVGRLT
Trigger: AGTCAGCCTGCCCACATGCCACCGAGCAAACGCATC...TGCTGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp GGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGGGGGCATCTACTTGCTaGAAACATGTTGGGAGAGAG +
Preference number: 4 (lower is better)
Translates to: GSPMGYTQETPPARPEGSGASTC*KHVGRE
Trigger: CTCTCTCCCAACATGTTTCCAGCAAGTAGATGCCCC...CGACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GTGACAGGTGGTGACCCTGGAGCCAGATCTGGAAGGCCTTCCTGGGGGCTGCCCCTTAAGTTGACAACTTaGACTTGGCCAATACTGCAT +
Preference number: 4 (lower is better)
Translates to: VTGGDPGARSGRPSWGLPLKLTT*TWPILH
Trigger: ATGCAGTATTGGCCAAGTCCAAGTTGTCAACTTAAG...GGGCAGCCCCCAGGAAGGCCTTCCAGATCTGGCTCCAGGGTCACCACCTGTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp AAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGGTATTGCTGTGACAGGTAGGACTGGACATGTTTaGGCCCCTGTTCCCGGTCTT +
Preference number: 4 (lower is better)
Translates to: KGASQSQESMVPGIAVTGRTGHV*APVPGL
Trigger: AAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCT...ACCTGTCACAGCAATACCTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp GGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACAAGGACTGGACATGTTTaGGCCCCTGTTCCCGGTCTT +
Preference number: 4 (lower is better)
Translates to: GQPGRSQVNHFTLTSSSTRTGHV*APVPGL
Trigger: AAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCT...TGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp GGCTGCCCAGGGAACTCACCCATGAATCCAGAAGCACTTAACACTGGTGGTGGTAGGACTGGACATGTTTaGGCCCCTGTTCCCGGTCTT +
Preference number: 4 (lower is better)
Translates to: GCPGNSPMNPEALNTGGGRTGHV*APVPGL
Trigger: AAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCT...ACCACCACCAGTGTTAAGTGCTTCTGGATTCATGGGTGAGTTCCCTGGGCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp GCCTTGGGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAAGGGAAGAAGAGGACTaGACATGTTTGGGCCCCTGT +
Preference number: 4 (lower is better)
Translates to: ALGSPMGYTQETPPARPEREEED*TCLGPC
Trigger: ACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCT...TTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCCCAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCCAAAAGCAGTGCTTTCTCTaGGCAGCCTCATGGACCAGA +
Preference number: 4 (lower is better)
Translates to: AQWVIPRKPLQQDQKGRQKQCFL*AASWTR
Trigger: TCTGGTCCATGAGGCTGCCCAGAGAAAGCACTGCTT...TTGGCGACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp GGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGGTCCTTCTGCCTCTATaGCCTGCAGAATCTGTTTTG +
Preference number: 4 (lower is better)
Translates to: GSPMGYTQETPPARPEGSVLLPL*PAESVL
Trigger: CAAAACAGATTCTGCAGGTCATAGAGGCAGAAGGAC...CGACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp CCAGCAGAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTTTGTTTGTTCGCCTGTaGGGAAGCTCTGTAGCTGTC +
Preference number: 4 (lower is better)
Translates to: PAEGRRGLDMFGPLFPVFLFVRL*GSSVAV
Trigger: GACAGCTACAGAGCTTCCTCACAGGCGAACAAACAA...AAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTCTGCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR TCA 90 bp TGTAGGAGGAGAGATGTGAAAAGCAAGATGCGTTTGCTCGGTGGCATGTGGGCACTGTTGCGCTTCATTTaGCCTGTGGCTGGCTTCCGG +
Preference number: 4 (lower is better)
Translates to: CRRRDVKSKMRLLGGMWALLRFI*PVAGFR
Trigger: CCGGAAGCCAGCCACAGGTCAAATGAAGCGCAACAG...TGCCCACATGCCACCGAGCAAACGCATCTTGCTTTTCACATCTCTCCTCCTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000651418.1
CDS-3UTR TCA 90 bp TCAATCATTTCACCCTCACGTCGAGCAGCACAGCACTCAGTGGCTCTGACAACATTAGTGCACTGCTGCTaGGACGCAACAGGCCATCCG +
Preference number: 4 (lower is better)
Translates to: SIISPSRRAAQHSVALTTLVHCC*DATGHP
Trigger: CGGATGGCCTGTTGCGTCTCAGCAGCAGTGCACTAA...TGTTGTCAGAGCCACTGAGTGCTGTGCTGCTCGACGTGAGGGTGAAATGATTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp GTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTCACGTTCTGCTGCAATaGCTCTTCTTTGGTCAAACC +
Preference number: 4 (lower is better)
Translates to: VSRCTSPLVGNARSYFNPHVLLQ*LFFGQT
Trigger: GGTTTGACCAAAGAAGAGTCATTGCAGCAGAACGTG...AGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp AGGTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCACGTTCTGCTGCAATaGCTCTTCTTTGGTCAAACC +
Preference number: 4 (lower is better)
Translates to: RSAGAPAPWWAMPGVTLTHVLLQ*LFFGQT
Trigger: GGTTTGACCAAAGAAGAGTCATTGCAGCAGAACGTG...GGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp GGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACACACACAAGCCACTTTTaGTTTCAGCCTCCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: GQPGRSQVNHFTLTSSSTHTSHF*FQPPPG
Trigger: GCCAGGAGGAGGCTGAAATCAAAAGTGGCTTGTGTG...TGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR TCA 90 bp GCCGGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTACGCTGTATACGCACTaGTTCTCCTGGGACACACAA +
Preference number: 4 (lower is better)
Translates to: AGDPTGHRATWQVTSQSFTLYTH*FSWDTQ
Trigger: TTGTGTGTCCCAGGAGAATCAGTGCGTATACAGCGT...AAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACCGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR TCA 90 bp CAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACAGCAGTGTTACGAAAGGACTaGCGATCTTCAAGCCGGGGC +
Preference number: 4 (lower is better)
Translates to: QPGRSQVNHFTLTSSSTAVLRKD*RSSSRG
Trigger: GCCCCGGCTTGAAGATCGTCAGTCCTTTCGTAACAC...TGCTGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR TCA 90 bp AGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCCAAGTGACAGAGGGCTTTAGCCCACCCAGGGTGGTTTaGTACGTGAAAGTTGAATCC +
Preference number: 4 (lower is better)
Translates to: RKPLQQDQKGRQVTEGFSPPRVV*YVKVES
Trigger: GGATTCAACTTTCACGTATCAAACCACCCTGGGTGG...GCTAAAGCCCTCTGTCACTTGGCGACCCTTCTGGTCTTGCTGGAGGGGTTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp AGATCAGTGTCAAACTGTACCCTTGAGTGTCCCCAAAGGTTCCAGCAGAGGGAAACTCCGTGGTGGGGATaGTCCGGGGGCATATCTGGT +
Preference number: 4 (lower is better)
Translates to: RSVSNCTLECPQRFQQRETPWWG*SGGISG
Trigger: ACCAGATATGCCCCCGGATCATCCCCACCACGGAGT...TTCCCTCTGCTGGAACCTTTGGGGACACTCAAGGGTACAGTTTGACACTGATCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR TCA 90 bp CAAGGCAAGGGAAAACACACACAGGGGCATCTACTTGCTGGAAACATGTTGGGAACTCCGTGGTGGGGATaGTCCGGGGGCATATCTGGT +
Preference number: 4 (lower is better)
Translates to: QGKGKHTQGHLLAGNMLGTPWWG*SGGISG
Trigger: ACCAGATATGCCCCCGGATCATCCCCACCACGGAGT...TCCCAACATGTTTCCAGCAAGTAGATGCCCCTGTGTGTGTTTTCCCTTGCCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR TCA 90 bp GGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACACATCCGGATGCAACTaGGGCTGCTCCACTAATCTC +
Preference number: 4 (lower is better)
Translates to: GDPTGHRATWQVTSQSFHTSGCN*GCSTNL
Trigger: GAGATTAGTGGAGCAGCCTCAGTTGCATCCGGATGT...GTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp CAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACAGCACTGTCCTCCGTGAGGTaGCCTTCAAAGTCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: QPGRSQVNHFTLTSSSTALSSVR*PSKSEA
Trigger: AGCCTCTGACTTTGAAGGTCACCTCACGGAGGACAG...TGCTGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp AGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTAAACCTGTCCTCCGTGAGGTaGCCTTCAAAGTCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: REEEDWTCLGPCSRSLVNLSSVR*PSKSEA
Trigger: AGCCTCTGACTTTGAAGGTCACCTCACGGAGGACAG...GTTTACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp GAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTAAACACTGCTGTCCTCCGTaGGGTGACCTTCAAAGTCAG +
Preference number: 4 (lower is better)
Translates to: EGRRGLDMFGPLFPVFGKHCCPP*GDLQSQ
Trigger: CTGACTTTGAAGGTCACCTCACGGAGGACAGCAGTG...TTTACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp CAAGTGACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCGTTAGTGGCCTCCACTaGGGACCCAGGCATGGACAG +
Preference number: 4 (lower is better)
Translates to: QVTEGFSSVNFGGRQECSVSGLH*GPRHGQ
Trigger: CTGTCCATGCCTGGGTCCTCAGTGGAGGCCACTAAC...GGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGTCACTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp GCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGTGCGCACGGACTTCCTTCTaGTCTTCACAACTAAAGGAA +
Preference number: 4 (lower is better)
Translates to: AGAPAPWWAMPGVTLTLCARTSF*SSQLKE
Trigger: TTCCTTTAGTTGTGAAGATCAGAAGGAAGTCCGTGC...GCACAGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp CAAGTGACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCGGCATCCCTTCCAAGTaGCCCACCAGTTCCAGGGGA +
Preference number: 4 (lower is better)
Translates to: QVTEGFSSVNFGGRQECSGIPSK*PTSSRG
Trigger: TCCCCTGGAACTGGTGGGTCACTTGGAAGGGATGCC...GGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGTCACTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp CTTCCTGGGGGCTGCCCAGGGAACTCACCCATGAATCCAGAAGCACTTAACACTAGAAGGGCAAGTCCATaGCAAAGGGCATCCCTTCCA +
Preference number: 4 (lower is better)
Translates to: LPGGCPGNSPMNPEALNTRRASP*QRASLP
Trigger: TGGAAGGGATGCCCTTTGTCATGGACTTGCCCTTCT...AGTGTTAAGTGCTTCTGGATTCATGGGTGAGTTCCCTGGGCAGCCCCCAGGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp GAGATGCCCACTCCCATAGGGTCCAAAGTGACAGGGAGGATGTCAAGCAGAGGAAGAAGGGCAAGTCCATaGCAAAGGGCATCCCTTCCA +
Preference number: 4 (lower is better)
Translates to: EMPTPIGSKVTGRMSSRGRRASP*QRASLP
Trigger: TGGAAGGGATGCCCTTTGTCATGGACTTGCCCTTCT...TCCTCTGCTTGACATCCTCCCTGTCACTTTGGACCCTATGGGAGTGGGCATCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp GGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACAGAAGGGCAAGTCCATaGCAAAGGGCATCCCTTCCA +
Preference number: 4 (lower is better)
Translates to: GDPTGHRATWQVTSQSFHRRASP*QRASLP
Trigger: TGGAAGGGATGCCCTTTGTCATGGACTTGCCCTTCT...GTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp CTGGCATTTCTACTTAGTTCAGGTAGGTTAACTCCCTTGGTGGAGAATGCAACCGCTCCAGAGGCTCACTaGGCCCCTTCCCTGGCTCTC +
Preference number: 4 (lower is better)
Translates to: LAFLLSSGRLTPLVENATAPEAH*APSLAL
Trigger: GAGAGCCAGGGAAGGGGCTCAGTGAGCCTCTGGAGC...GGTTGCATTCTCCACCAAGGGAGTTAACCTACCTGAACTAAGTAGAAATGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp GGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACAGCACTCAGTCCAATACAGTCATCGTaGCAGAACGCACCGCAGCCT +
Preference number: 4 (lower is better)
Translates to: GRSQVNHFTLTSSSTALSPIQSS*QNAPQP
Trigger: AGGCTGCGGTGCGTTCTGTCACGATGACTGTATTGG...ACTGAGTGCTGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp GCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGTGCCAATACACAGAGCTTTaGGGGTCCAATACAGTCATC +
Preference number: 4 (lower is better)
Translates to: AGAPAPWWAMPGVTLTLCQYTEL*GSNTVI
Trigger: GATGACTGTATTGGACCCTCAAAGCTCTGTGTATTG...GCACAGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp GGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCGTCAACTGGCAAATaGCTCAACTGTGACCCTGAG +
Preference number: 4 (lower is better)
Translates to: GDPTGHRATWQVTSQSFHPSTGK*LNCDPE
Trigger: CTCAGGGTCACAGTTGAGTCATTTGCCAGTTGACGG...GTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp AAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGGTATTGCTGTGACAGGTCCGTCAACTGGCAAATaGCTCAACTGTGACCCTGAG +
Preference number: 4 (lower is better)
Translates to: KGASQSQESMVPGIAVTGPSTGK*LNCDPE
Trigger: CTCAGGGTCACAGTTGAGTCATTTGCCAGTTGACGG...ACCTGTCACAGCAATACCTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp GGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCAGGGAACTCACCCATaGATCCAGAAGCACTTAACA +
Preference number: 4 (lower is better)
Translates to: GSPMGYTQETPPARPEGSQGTHP*IQKHLT
Trigger: TGTTAAGTGCTTCTGGATTCATGGGTGAGTTCCCTG...CGACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp ATCAAGAGATACATCGTTTTCACCACTCACAGTGCTGGCTTCATTAGACCCACAGCTCTGCTGAGGGACTaGGACAGGACCGACGGCGGG +
Preference number: 4 (lower is better)
Translates to: IKRYIVFTTHSAGFIRPTALLRD*DRTDGG
Trigger: CCCGCCGTCGGTCCTGTCTCAGTCCCTCAGCAGAGC...TGTGGGTCTAATGAAGCCAGCACTGTGAGTGGTGAAAACGATGTATCTCTTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644587.1
CDS-3UTR TCA 90 bp CATGGCTTTGTTTCTTCCCAAACCTGCCTGATGTCAAAAGTACGTCAAAAGGAGGCTCTGCTGAGGGACTaGGACAGGACCGACGGCGGG +
Preference number: 4 (lower is better)
Translates to: HGFVSSQTCLMSKVRQKEALLRD*DRTDGG
Trigger: CCCGCCGTCGGTCCTGTCTCAGTCCCTCAGCAGAGC...CTCCTTTTGACGTACTTTTGACATCAGGCAGGTTTGGGAAGAAACAAAGCCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375687.10
ENST00000613218.4
ENST00000651418.1
CDS-3UTR TCA 90 bp AGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTAAACTGCCATTGGCGTCCTTaGATGTGGGGTCGCTTTTCC +
Preference number: 4 (lower is better)
Translates to: REEEDWTCLGPCSRSLVNCHWRP*MWGRFS
Trigger: GGAAAAGCGACCCCACATTCAAGGACGCCAATGGCA...GTTTACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000646985.1
CDS-3UTR GCA 90 bp TCAATCATTTCACCCTCACGTCGAGCAGCACAGCACTCAGTGGCTCTGACAACAGGATGGCGAGACCACTaGAGGGCATCCTTCTTGAGC +
Preference number: 4 (lower is better)
Translates to: SIISPSRRAAQHSVALTTGWRDH*RASFLS
Trigger: GCTCAAGAAGGATGCCCTGCAGTGGTCTCGCCATCC...TGTTGTCAGAGCCACTGAGTGCTGTGCTGCTCGACGTGAGGGTGAAATGATTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp CAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGGAAGAGGAGCTGCTaGTGGAAGTGTGATGGTAAG +
Preference number: 4 (lower is better)
Translates to: QGIGQPGRSQVNHFTLTSRKRSC*WKCDGK
Trigger: CTTACCATCACACTTCCAGCAGCAGCTCCTCTTCCT...CGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR GCA 90 bp GCCGGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTTGGCCCACGTTCTGCTaGAATGACTCTTCTTTGGTC +
Preference number: 4 (lower is better)
Translates to: AGDPTGHRATWQVTSQSFWPTFC*NDSSLV
Trigger: GACCAAAGAAGAGTCATTGCAGCAGAACGTGGGCCA...AAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR GCA 90 bp GCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCCAATGGCCCACGTTCTGCTaGAATGACTCTTCTTTGGTC +
Preference number: 4 (lower is better)
Translates to: AQWVIPRKPLQQDQKGRQWPTFC*NDSSLV
Trigger: GACCAAAGAAGAGTCATTGCAGCAGAACGTGGGCCA...TTGGCGACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCCAATCCTGGCCCACGTTCTaGTGCAATGACTCTTCTTTG +
Preference number: 4 (lower is better)
Translates to: AQWVIPRKPLQQDQKGRQSWPTF*CNDSSL
Trigger: CAAAGAAGAGTCATTGCAGCAGAACGTGGGCCAGGA...TTGGCGACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACAGCACTCAGTAGATGCAGAGGCACGTaGCAAGTTGTCTGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: GRSQVNHFTLTSSSTALSRCRGT*QVVWLS
Trigger: GCTGAGCCAGACAACTTGGCACGTGCCTCTGCATCT...ACTGAGTGCTGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp AGGTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCAATTCTGTCTGGAGATaGAGAGGCACGTGCCAAGTT +
Preference number: 4 (lower is better)
Translates to: RSAGAPAPWWAMPGVTLTNSVWR*RGTCQV
Trigger: AACTTGGCACGTGCCTCTGCATCTCCAGACAGAATT...GGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp CAGAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTACTTTTCGGGAAAGGATaGAGAGGCCGCCTGCTCAAA +
Preference number: 4 (lower is better)
Translates to: QREEEDWTCLGPCSRSLVLFGKG*RGRLLK
Trigger: TTTGAGCAGGCGGCCTCTGCATCCTTTCCCGAAAAG...TACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR GCA 90 bp CTTGGTGGAGAATGCAACCTTCTTGCTTCAGTTTCAAGTCCCTCTGGGAGTCAGCTCGCCCCTCGGACCTaGAGAGCACGGGCTTTAATG +
Preference number: 4 (lower is better)
Translates to: LGGECNLLASVSSPSGSQLAPRT*RARALM
Trigger: CATTAAAGCCCGTGCTCTGCAGGTCCGAGGGGCGAG...CTGACTCCCAGAGGGACTTGAAACTGAAGCAAGAAGGTTGCATTCTCCACCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp AGGTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCTCAAATGCTCTGTTCTaGAGGCAATCAGTCGGTGAG +
Preference number: 4 (lower is better)
Translates to: RSAGAPAPWWAMPGVTLTSNALF*RQSVGE
Trigger: CTCACCGACTGATTGCCTGCAGAACAGAGCATTTGA...GGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp AAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGGTATTGCTGTGACAGGTGACAGTAACTGCCATTaGTGTCACTGCCTCCTCGAG +
Preference number: 4 (lower is better)
Translates to: KGASQSQESMVPGIAVTGDSNCH*CHCLLE
Trigger: CTCGAGGAGGCAGTGACAGCAATGGCAGTTACTGTC...ACCTGTCACAGCAATACCTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACAGACAGTAACTGCCATTaGTGTCACTGCCTCCTCGAG +
Preference number: 4 (lower is better)
Translates to: GQPGRSQVNHFTLTSSSTDSNCH*CHCLLE
Trigger: CTCGAGGAGGCAGTGACAGCAATGGCAGTTACTGTC...TGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp CCAGCAGAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTACCGTGAGGACTCAGTaGTTCAGAGTCTCCGTTGAT +
Preference number: 4 (lower is better)
Translates to: PAEGRRGLDMFGPLFPVFTVRTQ*FRVSVD
Trigger: ATCAACGGAGACTCTGAAGCACTGAGTCCTCACGGT...AAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTCTGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp AGGTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCAGATCCCTTTGTCACTaGAGCTTCTCTAGTGTCAGC +
Preference number: 4 (lower is better)
Translates to: RSAGAPAPWWAMPGVTLTRSLCH*SFSSVS
Trigger: GCTGACACTAGAGAAGCTGCAGTGACAAAGGGATCT...GGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GCCTTGGGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAACTACCCTGCAGCAACTaGATCACAAGTGGGTTAGTG +
Preference number: 4 (lower is better)
Translates to: ALGSPMGYTQETPPARPELPCSN*ITSGLV
Trigger: CACTAACCCACTTGTGATGCAGTTGCTGCAGGGTAG...TTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCCCAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACAGGGGCAAGCTACCCTaGAGCAACTGCATCACAAGT +
Preference number: 4 (lower is better)
Translates to: GDPTGHRATWQVTSQSFHRGKLP*SNCITS
Trigger: ACTTGTGATGCAGTTGCTGCAGGGTAGCTTGCCCCT...GTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GCCTTGGGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAACATGTAAAGATCCCATaGGTAGCGAGCCATGGCTCT +
Preference number: 4 (lower is better)
Translates to: ALGSPMGYTQETPPARPEHVKIP*VASHGS
Trigger: AGAGCCATGGCTCGCTACGCATGGGATCTTTACATG...TTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCCCAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp CAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGTCCTGGCAAGACCAGTaGCTGTTTCACAGCTATCTG +
Preference number: 4 (lower is better)
Translates to: QGIGQPGRSQVNHFTLTSSWQDQ*LFHSYL
Trigger: CAGATAGCTGTGAAACAGGCACTGGTCTTGCCAGGA...CGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp AGGTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCAACTTGGGACTGCCTTaGAATTCTTTTGGGGTGCTC +
Preference number: 4 (lower is better)
Translates to: RSAGAPAPWWAMPGVTLTNLGLP*NSFGVL
Trigger: GAGCACCCCAAAAGAATTGCAAGGCAGTCCCAAGTT...GGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GTGACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCTGCAGGGCCCGACCTGTCTaGTCTGGACCAAAGGAGATC +
Preference number: 4 (lower is better)
Translates to: VTEGFSSVNFGGRQECSCRARPV*SGPKEI
Trigger: GATCTCCTTTGGTCCAGAGCAGACAGGTCGGGCCCT...GCAGGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp ATGTCAAAAGTACGTCAAAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGAGGGCCCGACCTGTCTaGTCTGGACCAAAGGAGATC +
Preference number: 4 (lower is better)
Translates to: MSKVRQKEPHSPRRAWSQRARPV*SGPKEI
Trigger: GATCTCCTTTGGTCCAGAGCAGACAGGTCGGGCCCT...CTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTTTGACGTACTTTTGACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp AGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCCAAGTGACAGAGGGCTTTAGCCAGACATGGAGTTTGTaGTTGGTCCCAACTTCCCAC +
Preference number: 4 (lower is better)
Translates to: RKPLQQDQKGRQVTEGFSQTWSL*LVPTSH
Trigger: GTGGGAAGTTGGGACCAAGCACAAACTCCATGTCTG...GCTAAAGCCCTCTGTCACTTGGCGACCCTTCTGGTCTTGCTGGAGGGGTTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTAAATCATGGCTTTCAGGCTaGACGCACACTGGAGCGAGA +
Preference number: 4 (lower is better)
Translates to: EGRRGLDMFGPLFPVFGKSWLSG*THTGAR
Trigger: TCTCGCTCCAGTGTGCGTGCAGCCTGAAAGCCATGA...TTTACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGTGCAACCAAGGTCAAACTTaGTCCGTCAACTGGCAAATG +
Preference number: 4 (lower is better)
Translates to: AGAPAPWWAMPGVTLTLCNQGQT*SVNWQM
Trigger: CATTTGCCAGTTGACGGAGCAAGTTTGACCTTGGTT...GCACAGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp AAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGGTATTGCTGTGACAGGTAAAGCAAGATGCGTTTaGTCGGTGGCATGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: KGASQSQESMVPGIAVTGKARCV*SVACGQ
Trigger: CTGCCCACATGCCACCGAGCAAACGCATCTTGCTTT...ACCTGTCACAGCAATACCTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp GAGAGGCAGGAGCAGGCATGGCTTTGTTTCTTCCCAAACCTGCCTGATGTCAAATCCCTCCACTGTAGCTaGATGGCGAGACCACTGCAG +
Preference number: 4 (lower is better)
Translates to: ERQEQAWLCFFPNLPDVKSLHCS*MARPLQ
Trigger: CTGCAGTGGTCTCGCCATCCAGCTACAGTGGAGGGA...TTTGACATCAGGCAGGTTTGGGAAGAAACAAAGCCATGCCTGCTCCTGCCTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp GGCTGCCCAGGGAACTCACCCATGAATCCAGAAGCACTTAACACTGGTGGTGGTAGCTGTCCCTGGGATTaGAAAGAGGTCGACTCTGAG +
Preference number: 4 (lower is better)
Translates to: GCPGNSPMNPEALNTGGGSCPWD*KEVDSE
Trigger: CTCAGAGTCGACCTCTTTCCAATCCCAGGGACAGCT...ACCACCACCAGTGTTAAGTGCTTCTGGATTCATGGGTGAGTTCCCTGGGCAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp GACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTAGCTGTCCCTGGGATTaGAAAGAGGTCGACTCTGAG +
Preference number: 4 (lower is better)
Translates to: DPTGHRATWQVTSQSFHPSCPWD*KEVDSE
Trigger: CTCAGAGTCGACCTCTTTCCAATCCCAGGGACAGCT...AGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp GGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACAAGCTGTCCCTGGGATTaGAAAGAGGTCGACTCTGAG +
Preference number: 4 (lower is better)
Translates to: GQPGRSQVNHFTLTSSSTSCPWD*KEVDSE
Trigger: CTCAGAGTCGACCTCTTTCCAATCCCAGGGACAGCT...TGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp GAGATGCCCACTCCCATAGGGTCCAAAGTGACAGGGAGGATGTCAAGCAGAGGACTCTGTAGCTGTCCCTaGGATTGGAAAGAGGTCGAC +
Preference number: 4 (lower is better)
Translates to: EMPTPIGSKVTGRMSSRGLCSCP*DWKEVD
Trigger: GTCGACCTCTTTCCAATCCCAGGGACAGCTACAGAG...TCCTCTGCTTGACATCCTCCCTGTCACTTTGGACCCTATGGGAGTGGGCATCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACGATGCAGATTCCACGTaGGCCCCGTTTACCTTCAGA +
Preference number: 4 (lower is better)
Translates to: GDPTGHRATWQVTSQSFHDADST*APFTFR
Trigger: TCTGAAGGTAAACGGGGCCCACGTGGAATCTGCATC...GTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp AGGTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCTGTGATGGTAAGGCATaGAAGGTCCGAGAGTTGATC +
Preference number: 4 (lower is better)
Translates to: RSAGAPAPWWAMPGVTLTCDGKA*KVRELI
Trigger: GATCAACTCTCGGACCTTCCATGCCTTACCATCACA...GGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GCCGGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTAAGAGGAGCTGCTGCTaGAAGTGTGATGGTAAGGCA +
Preference number: 4 (lower is better)
Translates to: AGDPTGHRATWQVTSQSFKRSCC*KCDGKA
Trigger: TGCCTTACCATCACACTTCCAGCAGCAGCTCCTCTT...AAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACCGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp ACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCTGCCTATCGCTGTCGGGTGGCTaGACCACGCTGTATACGCAC +
Preference number: 4 (lower is better)
Translates to: TEGFSSVNFGGRQECSCLSLSGG*TTLYTH
Trigger: GTGCGTATACAGCGTGGTCCAGCCACCCGACAGCGA...TAGGCAGGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CAAGGCAAGGGAAAACACACACAGGGGCATCTACTTGCTGGAAACATGTTGGGATCGCTGTCGGGTGGCTaGACCACGCTGTATACGCAC +
Preference number: 4 (lower is better)
Translates to: QGKGKHTQGHLLAGNMLGSLSGG*TTLYTH
Trigger: GTGCGTATACAGCGTGGTCCAGCCACCCGACAGCGA...TCCCAACATGTTTCCAGCAAGTAGATGCCCCTGTGTGTGTTTTCCCTTGCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp TGTAGGAGGAGAGATGTGAAAAGCAAGATGCGTTTGCTCGGTGGCATGTGGGCACATCTCGCTGTCGGGTaGCTGGACCACGCTGTATAC +
Preference number: 4 (lower is better)
Translates to: CRRRDVKSKMRLLGGMWAHLAVG*LDHAVY
Trigger: GTATACAGCGTGGTCCAGCCACCCGACAGCGAGATG...TGCCCACATGCCACCGAGCAAACGCATCTTGCTTTTCACATCTCTCCTCCTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp ATGTCAAAAGTACGTCAAAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGCATCTCGCTGTCGGGTaGCTGGACCACGCTGTATAC +
Preference number: 4 (lower is better)
Translates to: MSKVRQKEPHSPRRAWSQHLAVG*LDHAVY
Trigger: GTATACAGCGTGGTCCAGCCACCCGACAGCGAGATG...CTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTTTGACGTACTTTTGACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp GAGAATGCAACCTTCTTGCTTCAGTTTCAAGTCCCTCTGGGAGTCAGGCAGTCCCATCTCGCTGTCGGGTaGCTGGACCACGCTGTATAC +
Preference number: 4 (lower is better)
Translates to: ENATFLLQFQVPLGVRQSHLAVG*LDHAVY
Trigger: GTATACAGCGTGGTCCAGCCACCCGACAGCGAGATG...GGACTGCCTGACTCCCAGAGGGACTTGAAACTGAAGCAAGAAGGTTGCATTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp AGGTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCTCTGGTTCGGAGATCTaGCCGAGAGCGTTTCTTAAA +
Preference number: 4 (lower is better)
Translates to: RSAGAPAPWWAMPGVTLTSGSEI*PRAFLK
Trigger: TTTAAGAAACGCTCTCGGCCAGATCTCCGAACCAGA...GGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CTTTCACATACACAGGTGCGTGGAGATGCCCACTCCCATAGGGTCCAAAGTGACGATTCCTTCTGGCTCTaGTTCGGAGATCTGGCCGAG +
Preference number: 4 (lower is better)
Translates to: LSHTQVRGDAHSHRVQSDDSFWL*FGDLAE
Trigger: CTCGGCCAGATCTCCGAACCAGAGCCAGAAGGAATC...GTCACTTTGGACCCTATGGGAGTGGGCATCTCCACGCACCTGTGTATGTGAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CTTGGTGGAGAATGCAACCTTCTTGCTTCAGTTTCAAGTCCCTCTGGGAGTCAGACTGCTCAGCCCTGCTaGGTCAGTCTTAGCCTCCCC +
Preference number: 4 (lower is better)
Translates to: LGGECNLLASVSSPSGSQTAQPC*VSLSLP
Trigger: GGGGAGGCTAAGACTGACCCAGCAGGGCTGAGCAGT...CTGACTCCCAGAGGGACTTGAAACTGAAGCAAGAAGGTTGCATTCTCCACCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CAAGTGACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCGATGTGCCTGGCAGATaGGGACTGCTCAGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: QVTEGFSSVNFGGRQECSDVPGR*GLLSPA
Trigger: AGCAGGGCTGAGCAGTCCCCATCTGCCAGGCACATC...GGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGTCACTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp AGATCAGTGTCAAACTGTACCCTTGAGTGTCCCCAAAGGTTCCAGCAGAGGGAAGATGTGCCTGGCAGATaGGGACTGCTCAGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: RSVSNCTLECPQRFQQREDVPGR*GLLSPA
Trigger: AGCAGGGCTGAGCAGTCCCCATCTGCCAGGCACATC...TTCCCTCTGCTGGAACCTTTGGGGACACTCAAGGGTACAGTTTGACACTGATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp GTCAAAAGTACGTCAAAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGGTTTGTCTGGCTCAGCCTaGATCCGAGAAGCCACAGAC +
Preference number: 4 (lower is better)
Translates to: VKSTSKGASQSQESMVPGLSGSA*IREATD
Trigger: GTCTGTGGCTTCTCGGATCCAGGCTGAGCCAGACAA...ACCTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTTTGACGTACTTTTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp TTTGTTTCTTCCCAAACCTGCCTGATGTCAAAAGTACGTCAAAAGGAGCCTCACTGTCTGCGAGGGTCCTaGCGCCAGTCCAACCCCGGC +
Preference number: 4 (lower is better)
Translates to: FVSSQTCLMSKVRQKEPHCLRGS*RQSNPG
Trigger: GCCGGGGTTGGACTGGCGCCAGGACCCTCGCAGACA...GTGAGGCTCCTTTTGACGTACTTTTGACATCAGGCAGGTTTGGGAAGAAACAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp CAGACGCTTAAGTTGACAACTTGGACTTGGCCAATACTGCATTCTAAATCACCATGCTCGGGCCTCCCCTaGGCTCAGGGTGGCCACAGG +
Preference number: 4 (lower is better)
Translates to: QTLKLTTWTWPILHSKSPCSGLP*AQGGHR
Trigger: CCTGTGGCCACCCTGAGCCCAGGGGAGGCCCGAGCA...TGGTGATTTAGAATGCAGTATTGGCCAAGTCCAAGTTGTCAACTTAAGCGTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp ACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCTGCCTAGGAGCAACGGGGAGTTaGGAGGCATCTCCTAGCCCA +
Preference number: 4 (lower is better)
Translates to: TEGFSSVNFGGRQECSCLGATGS*EASPSP
Trigger: TGGGCTAGGAGATGCCTCCCAACTCCCCGTTGCTCC...TAGGCAGGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp AACAAGGCAAGGGAAAACACACACAGGGGCATCTACTTGCTGGAAACATGTTGGAGTAGGGGCAAGGCCTaGCATGGCTGGTCCCCAGTG +
Preference number: 4 (lower is better)
Translates to: NKARENTHRGIYLLETCWSRGKA*HGWSPV
Trigger: CACTGGGGACCAGCCATGCCAGGCCTTGCCCCTACT...CCAACATGTTTCCAGCAAGTAGATGCCCCTGTGTGTGTTTTCCCTTGCCTTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CAGAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTATGTCTGCAGGAACGGTaGGTCCTTGCTCCTCATCAT +
Preference number: 4 (lower is better)
Translates to: QREEEDWTCLGPCSRSLVCLQER*VLAPHH
Trigger: ATGATGAGGAGCAAGGACCCACCGTTCCTGCAGACA...TACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCCAACCACTAGAGACGGAATaGGACCATTGTCTGCAGGAA +
Preference number: 4 (lower is better)
Translates to: AQWVIPRKPLQQDQKGRQPLETE*DHCLQE
Trigger: TTCCTGCAGACAATGGTCCCATTCCGTCTCTAGTGG...TTGGCGACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACTCCTCTCCAACCTaGGGCTCAACAGATGGTATG +
Preference number: 4 (lower is better)
Translates to: DPTGHRATWQVTSQSFHPHSSPT*GSTDGM
Trigger: CATACCATCTGTTGAGCCCCAGGTTGGAGAGGAGTG...AGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CTTTCACATACACAGGTGCGTGGAGATGCCCACTCCCATAGGGTCCAAAGTGACCAGAGGCTGTATCCGTaGACTCACCGTGAGGACTCA +
Preference number: 4 (lower is better)
Translates to: LSHTQVRGDAHSHRVQSDQRLYP*THREDS
Trigger: TGAGTCCTCACGGTGAGTCCACGGATACAGCCTCTG...GTCACTTTGGACCCTATGGGAGTGGGCATCTCCACGCACCTGTGTATGTGAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CCAGCCGGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCAATTCACCTTGGACAGTaGGGCAGATTGGTTCCAATT +
Preference number: 4 (lower is better)
Translates to: PAGDPTGHRATWQVTSQSIHLGQ*GRLVPI
Trigger: AATTGGAACCAATCTGCCCCACTGTCCAAGGTGAAT...TGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACCGGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp AGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCCAAGTGACAGAGGGCTTTAGCGAATCTGGGATCTTTTaGCGGACCGCACATACTCGA +
Preference number: 4 (lower is better)
Translates to: RKPLQQDQKGRQVTEGFSESGIF*RTAHTR
Trigger: TCGAGTATGTGCGGTCCGCCAAAAGATCCCAGATTC...GCTAAAGCCCTCTGTCACTTGGCGACCCTTCTGGTCTTGCTGGAGGGGTTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CAGAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTAGACATGCTGTCATCGTaGGCTGGTGGAAGAACCTTC +
Preference number: 4 (lower is better)
Translates to: QREEEDWTCLGPCSRSLVDMLSS*AGGRTF
Trigger: GAAGGTTCTTCCACCAGCCCACGATGACAGCATGTC...TACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GTCAAAAGTACGTCAAAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGGTGCCTTGCAATTCTTTTaGGGTGCTCCAGGAGCCTGG +
Preference number: 4 (lower is better)
Translates to: VKSTSKGASQSQESMVPGALQFF*GAPGAW
Trigger: CCAGGCTCCTGGAGCACCCCAAAAGAATTGCAAGGC...ACCTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTTTGACGTACTTTTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp AGGTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCGGATTTGTCACTGGATaGAGGGAGTCAAAACTTGGG +
Preference number: 4 (lower is better)
Translates to: RSAGAPAPWWAMPGVTLTGFVTG*RESKLG
Trigger: CCCAAGTTTTGACTCCCTCCATCCAGTGACAAATCC...GGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGGGATTTGTCACTGGATaGAGGGAGTCAAAACTTGGG +
Preference number: 4 (lower is better)
Translates to: GSPMGYTQETPPARPEGSGFVTG*RESKLG
Trigger: CCCAAGTTTTGACTCCCTCCATCCAGTGACAAATCC...CGACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACACCCACTGGGAAAAACTaGAGGGATCTCAGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: GQPGRSQVNHFTLTSSSTPTGKN*RDLSRK
Trigger: CTTCCTGCTGAGATCCCTCCAGTTTTTCCCAGTGGG...TGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACAGTACCCCACCAGACATaGAGTTTGTGCTTGGTCCCA +
Preference number: 4 (lower is better)
Translates to: GQPGRSQVNHFTLTSSSTVPHQT*SLCLVP
Trigger: TGGGACCAAGCACAAACTCCATGTCTGGTGGGGTAC...TGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGTGCCTGGTGGAACTCAGTTaGAGTTTAGAAAGCTTCCCA +
Preference number: 4 (lower is better)
Translates to: AGAPAPWWAMPGVTLTLCLVELS*SLESFP
Trigger: TGGGAAGCTTTCTAAACTCCAACTGAGTTCCACCAG...GCACAGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GGGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGAAAGTGATGCACTGTaGCTCGCACCAAAGTTTGCT +
Preference number: 4 (lower is better)
Translates to: GQPNGLYPGNPSSKTRRVESDAL*LAPKFA
Trigger: AGCAAACTTTGGTGCGAGCCACAGTGCATCACTTTC...GACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GAGAATGCAACCTTCTTGCTTCAGTTTCAAGTCCCTCTGGGAGTCAGGCAGTCCAGGCTGCACGCACACTaGAGCGAGATGCTTTCCACC +
Preference number: 4 (lower is better)
Translates to: ENATFLLQFQVPLGVRQSRLHAH*SEMLST
Trigger: GGTGGAAAGCATCTCGCTCCAGTGTGCGTGCAGCCT...GGACTGCCTGACTCCCAGAGGGACTTGAAACTGAAGCAAGAAGGTTGCATTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GAGAGGCAGGAGCAGGCATGGCTTTGTTTCTTCCCAAACCTGCCTGATGTCAAAAGGCTGCACGCACACTaGAGCGAGATGCTTTCCACC +
Preference number: 4 (lower is better)
Translates to: ERQEQAWLCFFPNLPDVKRLHAH*SEMLST
Trigger: GGTGGAAAGCATCTCGCTCCAGTGTGCGTGCAGCCT...TTTGACATCAGGCAGGTTTGGGAAGAAACAAAGCCATGCCTGCTCCTGCCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACAGCACTCAGTCCTTGGGCAGCCCAATaGGTTATACCCAGGAAACCC +
Preference number: 4 (lower is better)
Translates to: GRSQVNHFTLTSSSTALSPWAAQ*VIPRKP
Trigger: GGGTTTCCTGGGTATAACCCATTGGGCTGCCCAAGG...ACTGAGTGCTGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GAGAGGCAGGAGCAGGCATGGCTTTGTTTCTTCCCAAACCTGCCTGATGTCAAACAGGCTGGCTGGCCTTaGGCAGCCCAATGGGTTATA +
Preference number: 4 (lower is better)
Translates to: ERQEQAWLCFFPNLPDVKQAGWP*AAQWVI
Trigger: TATAACCCATTGGGCTGCCCAAGGCCAGCCAGCCTG...TTTGACATCAGGCAGGTTTGGGAAGAAACAAAGCCATGCCTGCTCCTGCCTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GAGAATGCAACCTTCTTGCTTCAGTTTCAAGTCCCTCTGGGAGTCAGGCAGTCCCAGGCTGGCTGGCCTTaGGCAGCCCAATGGGTTATA +
Preference number: 4 (lower is better)
Translates to: ENATFLLQFQVPLGVRQSQAGWP*AAQWVI
Trigger: TATAACCCATTGGGCTGCCCAAGGCCAGCCAGCCTG...GGACTGCCTGACTCCCAGAGGGACTTGAAACTGAAGCAAGAAGGTTGCATTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTAGGGAAGAAGAGGACTaGACATGTTTGGGCCCCTGT +
Preference number: 4 (lower is better)
Translates to: DPTGHRATWQVTSQSFHPREEED*TCLGPC
Trigger: ACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCT...AGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp GGCTGCCCAGGGAACTCACCCATGAATCCAGAAGCACTTAACACTGGTGGTGGTAGGGAAGAAGAGGACTaGACATGTTTGGGCCCCTGT +
Preference number: 4 (lower is better)
Translates to: GCPGNSPMNPEALNTGGGREEED*TCLGPC
Trigger: ACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCT...ACCACCACCAGTGTTAAGTGCTTCTGGATTCATGGGTGAGTTCCCTGGGCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp TCCACGTGGGCCCCGTTTACCTTCAGAGGAGTCAGGACAACTCGAGGCAGCATCTTTGTGAAGCTGTGGTaGGAAGATCACTTGAGGCCA +
Preference number: 4 (lower is better)
Translates to: STWAPFTFRGVRTTRGSIFVKLW*EDHLRP
Trigger: TGGCCTCAAGTGATCTTCCCACCACAGCTTCACAAA...GATGCTGCCTCGAGTTGTCCTGACTCCTCTGAAGGTAAACGGGGCCCACGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644587.1
CDS-3UTR TCA 90 bp CAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGGTCCTTCTGCCTCTATaGCCTGCAGAATCTGTTTTG +
Preference number: 4 (lower is better)
Translates to: QGIGQPGRSQVNHFTLTSVLLPL*PAESVL
Trigger: CAAAACAGATTCTGCAGGTCATAGAGGCAGAAGGAC...CGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR TCA 90 bp GTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGAAAGAGGTCGACTCTaGGATTCTGTAGAACAGGAT +
Preference number: 4 (lower is better)
Translates to: VSRCTSPLVGNARSYFNPERGRL*DSVEQD
Trigger: ATCCTGTTCTACAGAATCTCAGAGTCGACCTCTTTC...AGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp CTTCCTGGGGGCTGCCCAGGGAACTCACCCATGAATCCAGAAGCACTTAACACTTTGTTTGTTCGCCTGTaGGGAAGCTCTGTAGCTGTC +
Preference number: 4 (lower is better)
Translates to: LPGGCPGNSPMNPEALNTLFVRL*GSSVAV
Trigger: GACAGCTACAGAGCTTCCTCACAGGCGAACAAACAA...AGTGTTAAGTGCTTCTGGATTCATGGGTGAGTTCCCTGGGCAGCCCCCAGGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR TCA 90 bp CCGGTCTTTGGTAAACAGACGCTTAAGTTGACAACTTGGACTTGGCCAATACTGGCAGCCCGAGAACCCTaGTGCAGATTCCACGTGGGC +
Preference number: 4 (lower is better)
Translates to: PVFGKQTLKLTTWTWPILAAREP*CRFHVG
Trigger: GCCCACGTGGAATCTGCATCAGGGTTCTCGGGCTGC...CAGTATTGGCCAAGTCCAAGTTGTCAACTTAAGCGTCTGTTTACCAAAGACCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000651418.1
CDS-3UTR TCA 90 bp AGATCAGTGTCAAACTGTACCCTTGAGTGTCCCCAAAGGTTCCAGCAGAGGGAATTAGTGCACTGCTGCTaGGACGCAACAGGCCATCCG +
Preference number: 4 (lower is better)
Translates to: RSVSNCTLECPQRFQQRELVHCC*DATGHP
Trigger: CGGATGGCCTGTTGCGTCTCAGCAGCAGTGCACTAA...TTCCCTCTGCTGGAACCTTTGGGGACACTCAAGGGTACAGTTTGACACTGATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR TCA 90 bp CAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGCACGTTCTGCTGCAATaGCTCTTCTTTGGTCAAACC +
Preference number: 4 (lower is better)
Translates to: QGIGQPGRSQVNHFTLTSHVLLQ*LFFGQT
Trigger: GGTTTGACCAAAGAAGAGTCATTGCAGCAGAACGTG...CGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR TCA 90 bp GCCGGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACGTTCTGCTGCAATaGCTCTTCTTTGGTCAAACC +
Preference number: 4 (lower is better)
Translates to: AGDPTGHRATWQVTSQSFHVLLQ*LFFGQT
Trigger: GGTTTGACCAAAGAAGAGTCATTGCAGCAGAACGTG...AAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACCGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR TCA 90 bp GGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACGTAGAGGGGAACATCTaGGGCCACAGATTTTGCATC +
Preference number: 4 (lower is better)
Translates to: GDPTGHRATWQVTSQSFHVEGNI*GHRFCI
Trigger: GATGCAAAATCTGTGGCCTCAGATGTTCCCCTCTAC...GTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR TCA 90 bp GAGATGCCCACTCCCATAGGGTCCAAAGTGACAGGGAGGATGTCAAGCAGAGGAGGGTGGTTTGATACGTaGAAGTTGAATCCGGATGGG +
Preference number: 4 (lower is better)
Translates to: EMPTPIGSKVTGRMSSRGGWFDT*KLNPDG
Trigger: CCCATCCGGATTCAACTTTCACGTATCAAACCACCC...TCCTCTGCTTGACATCCTCCCTGTCACTTTGGACCCTATGGGAGTGGGCATCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp GGGGGTAGTGGAAGACTGGCATTTCTACTTAGTTCAGGTAGGTTAACTCCCTTGACTCCGTGGTGGGGATaGTCCGGGGGCATATCTGGT +
Preference number: 4 (lower is better)
Translates to: GGSGRLAFLLSSGRLTPLTPWWG*SGGISG
Trigger: ACCAGATATGCCCCCGGATCATCCCCACCACGGAGT...CAAGGGAGTTAACCTACCTGAACTAAGTAGAAATGCCAGTCTTCCACTACCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp AGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTAAACACATCCGGATGCAACTaGGGCTGCTCCACTAATCTC +
Preference number: 4 (lower is better)
Translates to: REEEDWTCLGPCSRSLVNTSGCN*GCSTNL
Trigger: GAGATTAGTGGAGCAGCCTCAGTTGCATCCGGATGT...GTTTACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp GAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTAAAACATCCGGATGCAACTaGGGCTGCTCCACTAATCTC +
Preference number: 4 (lower is better)
Translates to: EGRRGLDMFGPLFPVFGKTSGCN*GCSTNL
Trigger: GAGATTAGTGGAGCAGCCTCAGTTGCATCCGGATGT...TTTACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp CTTCCTGGGGGCTGCCCAGGGAACTCACCCATGAATCCAGAAGCACTTAACACTTCCTTCATAGTGGGATaGCTGTCAAGAGCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: LPGGCPGNSPMNPEALNTSFIVG*LSRAWP
Trigger: TGGCCAAGCTCTTGACAGTCATCCCACTATGAAGGA...AGTGTTAAGTGCTTCTGGATTCATGGGTGAGTTCCCTGGGCAGCCCCCAGGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp CAGAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTATCCTTCATAGTGGGATaGCTGTCAAGAGCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: QREEEDWTCLGPCSRSLVSFIVG*LSRAWP
Trigger: TGGCCAAGCTCTTGACAGTCATCCCACTATGAAGGA...TACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp CAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACAGCACAGGCAATCAGTCGGTaGGGATTCAGGTGTGGAACT +
Preference number: 4 (lower is better)
Translates to: QPGRSQVNHFTLTSSSTAQAISR*GFRCGT
Trigger: AGTTCCACACCTGAATCCTCACCGACTGATTGCCTG...TGCTGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp ACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCTGCCTATCCGTGGACTCACCGTaGGGACTCAGTGCTTCAGAG +
Preference number: 4 (lower is better)
Translates to: TEGFSSVNFGGRQECSCLSVDSP*GLSASE
Trigger: CTCTGAAGCACTGAGTCCTCACGGTGAGTCCACGGA...TAGGCAGGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp GGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACAGCACTCAGTTACTTGTGGGGATTCTaGCATGCTGTCATCGTGGGC +
Preference number: 4 (lower is better)
Translates to: GRSQVNHFTLTSSSTALSYLWGF*HAVIVG
Trigger: GCCCACGATGACAGCATGTCAGAATCCCCACAAGTA...ACTGAGTGCTGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp CTTTCACATACACAGGTGCGTGGAGATGCCCACTCCCATAGGGTCCAAAGTGACTACTTGTGGGGATTCTaGCATGCTGTCATCGTGGGC +
Preference number: 4 (lower is better)
Translates to: LSHTQVRGDAHSHRVQSDYLWGF*HAVIVG
Trigger: GCCCACGATGACAGCATGTCAGAATCCCCACAAGTA...GTCACTTTGGACCCTATGGGAGTGGGCATCTCCACGCACCTGTGTATGTGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp GGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGGCACGGACTTCCTTCTaGTCTTCACAACTAAAGGAA +
Preference number: 4 (lower is better)
Translates to: GSPMGYTQETPPARPEGSARTSF*SSQLKE
Trigger: TTCCTTTAGTTGTGAAGATCAGAAGGAAGTCCGTGC...CGACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp CTTGGTGGAGAATGCAACCTTCTTGCTTCAGTTTCAAGTCCCTCTGGGAGTCAGCCTGTAACATTGCTCTaGTCACCCAGGGCCCGACCT +
Preference number: 4 (lower is better)
Translates to: LGGECNLLASVSSPSGSQPVTLL*SPRARP
Trigger: AGGTCGGGCCCTGGGTGATCAGAGCAATGTTACAGG...CTGACTCCCAGAGGGACTTGAAACTGAAGCAAGAAGGTTGCATTCTCCACCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp GGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGAAGTCTTCTCATTCTTaGCGCTGCCAACAAAGGCAT +
Preference number: 4 (lower is better)
Translates to: GSPMGYTQETPPARPEGSKSSHS*RCQQRH
Trigger: ATGCCTTTGTTGGCAGCGTCAAGAATGAGAAGACTT...CGACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp GTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTCAATACACAGAGCTTTaGGGGTCCAATACAGTCATC +
Preference number: 4 (lower is better)
Translates to: VSRCTSPLVGNARSYFNPQYTEL*GSNTVI
Trigger: GATGACTGTATTGGACCCTCAAAGCTCTGTGTATTG...AGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp GTCAAAAGTACGTCAAAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGGTCCGTCAACTGGCAAATaGCTCAACTGTGACCCTGAG +
Preference number: 4 (lower is better)
Translates to: VKSTSKGASQSQESMVPGPSTGK*LNCDPE
Trigger: CTCAGGGTCACAGTTGAGTCATTTGCCAGTTGACGG...ACCTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTTTGACGTACTTTTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp AAAAGTACGTCAAAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGGTATTTCCCAGGTATTGCTGTaGCAGGTGGTGACCCTGGAG +
Preference number: 4 (lower is better)
Translates to: KSTSKGASQSQESMVPGISQVLL*QVVTLE
Trigger: CTCCAGGGTCACCACCTGTCACAGCAATACCTGGGA...AATACCTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTTTGACGTACTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR TCA 90 bp GGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCACTCATGCTTCAGATaGCGAAAATGCCACATCAGA +
Preference number: 4 (lower is better)
Translates to: GSPMGYTQETPPARPEGSHSCFR*RKCHIR
Trigger: TCTGATGTGGCATTTTCGTCATCTGAAGCATGAGTG...CGACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp CCGGTCTTTGGTAAACAGACGCTTAAGTTGACAACTTGGACTTGGCCAATACTGGCTTTCCCGCTCTGCTaGGGGACTGAGACAGGACCG +
Preference number: 4 (lower is better)
Translates to: PVFGKQTLKLTTWTWPILAFPLC*GTETGP
Trigger: CGGTCCTGTCTCAGTCCCTCAGCAGAGCGGGAAAGC...CAGTATTGGCCAAGTCCAAGTTGTCAACTTAAGCGTCTGTTTACCAAAGACCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375687.10
ENST00000613218.4
ENST00000651418.1
CDS-3UTR TCA 90 bp TGTAATCCATCCCAGTGCTTTGTGAAGCTGTGGTGGGAAGATCACTTGAGGCCACTCTATCCCAGACCCTaGGGCTCAGCAGGTCTTACG +
Preference number: 4 (lower is better)
Translates to: CNPSQCFVKLWWEDHLRPLYPRP*GSAGLT
Trigger: CGTAAGACCTGCTGAGCCTCAGGGTCTGGGATAGAG...TGGCCTCAAGTGATCTTCCCACCACAGCTTCACAAAGCACTGGGATGGATTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649901.1
CDS-3UTR GCA 90 bp GGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGTCTGCCTCTATGACCTaGAGAATCTGTTTTGGTGTC +
Preference number: 4 (lower is better)
Translates to: GSPMGYTQETPPARPEGSSASMT*RICFGV
Trigger: GACACCAAAACAGATTCTGCAGGTCATAGAGGCAGA...CGACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp CAAGGCAAGGGAAAACACACACAGGGGCATCTACTTGCTGGAAACATGTTGGGAGGATGGCGAGACCACTaGAGGGCATCCTTCTTGAGC +
Preference number: 4 (lower is better)
Translates to: QGKGKHTQGHLLAGNMLGGWRDH*RASFLS
Trigger: GCTCAAGAAGGATGCCCTGCAGTGGTCTCGCCATCC...TCCCAACATGTTTCCAGCAAGTAGATGCCCCTGTGTGTGTTTTCCCTTGCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR GCA 90 bp CAGAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTATGGCCCACGTTCTGCTaGAATGACTCTTCTTTGGTC +
Preference number: 4 (lower is better)
Translates to: QREEEDWTCLGPCSRSLVWPTFC*NDSSLV
Trigger: GACCAAAGAAGAGTCATTGCAGCAGAACGTGGGCCA...TACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR GCA 90 bp GACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTTGGCCCACGTTCTGCTaGAATGACTCTTCTTTGGTC +
Preference number: 4 (lower is better)
Translates to: DPTGHRATWQVTSQSFHPWPTFC*NDSSLV
Trigger: GACCAAAGAAGAGTCATTGCAGCAGAACGTGGGCCA...AGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR GCA 90 bp GGCTGCCCAGGGAACTCACCCATGAATCCAGAAGCACTTAACACTGGTGGTGGTTCCTGGCCCACGTTCTaGTGCAATGACTCTTCTTTG +
Preference number: 4 (lower is better)
Translates to: GCPGNSPMNPEALNTGGGSWPTF*CNDSSL
Trigger: CAAAGAAGAGTCATTGCAGCAGAACGTGGGCCAGGA...ACCACCACCAGTGTTAAGTGCTTCTGGATTCATGGGTGAGTTCCCTGGGCAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR GCA 90 bp GGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACATCCTGGCCCACGTTCTaGTGCAATGACTCTTCTTTG +
Preference number: 4 (lower is better)
Translates to: GQPGRSQVNHFTLTSSSTSWPTF*CNDSSL
Trigger: CAAAGAAGAGTCATTGCAGCAGAACGTGGGCCAGGA...TGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR GCA 90 bp CTGGCATTTCTACTTAGTTCAGGTAGGTTAACTCCCTTGGTGGAGAATGCAACCCTCCAGGTCGGGTGCTaGAGAGGATGTGCCTGGCAG +
Preference number: 4 (lower is better)
Translates to: LAFLLSSGRLTPLVENATLQVGC*RGCAWQ
Trigger: CTGCCAGGCACATCCTCTGCAGCACCCGACCTGGAG...GGTTGCATTCTCCACCAAGGGAGTTAACCTACCTGAACTAAGTAGAAATGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GCCTTGGGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAAATTCTGTCTGGAGATaGAGAGGCACGTGCCAAGTT +
Preference number: 4 (lower is better)
Translates to: ALGSPMGYTQETPPARPENSVWR*RGTCQV
Trigger: AACTTGGCACGTGCCTCTGCATCTCCAGACAGAATT...TTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCCCAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp CAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAATTCTGTCTGGAGATaGAGAGGCACGTGCCAAGTT +
Preference number: 4 (lower is better)
Translates to: QGIGQPGRSQVNHFTLTSNSVWR*RGTCQV
Trigger: AACTTGGCACGTGCCTCTGCATCTCCAGACAGAATT...CGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR GCA 90 bp AGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTAAACCTTTTCGGGAAAGGATaGAGAGGCCGCCTGCTCAAA +
Preference number: 4 (lower is better)
Translates to: REEEDWTCLGPCSRSLVNLFGKG*RGRLLK
Trigger: TTTGAGCAGGCGGCCTCTGCATCCTTTCCCGAAAAG...GTTTACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR GCA 90 bp GCCTTGGGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAAGATCCCTTTGTCACTaGAGCTTCTCTAGTGTCAGC +
Preference number: 4 (lower is better)
Translates to: ALGSPMGYTQETPPARPERSLCH*SFSSVS
Trigger: GCTGACACTAGAGAAGCTGCAGTGACAAAGGGATCT...TTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCCCAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp CAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGATCCCTTTGTCACTaGAGCTTCTCTAGTGTCAGC +
Preference number: 4 (lower is better)
Translates to: QGIGQPGRSQVNHFTLTSRSLCH*SFSSVS
Trigger: GCTGACACTAGAGAAGCTGCAGTGACAAAGGGATCT...CGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GAGAATGCAACCTTCTTGCTTCAGTTTCAAGTCCCTCTGGGAGTCAGGCAGTCCGTGGGGATTCTGACATaGTGTCATCGTGGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: ENATFLLQFQVPLGVRQSVGILT*CHRGLV
Trigger: CACCAGCCCACGATGACAGCATGTCAGAATCCCCAC...GGACTGCCTGACTCCCAGAGGGACTTGAAACTGAAGCAAGAAGGTTGCATTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GCCTTGGGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAATTAAAGAACTGGGGCTaGTTCCATCAACCATGCCAC +
Preference number: 4 (lower is better)
Translates to: ALGSPMGYTQETPPARPELKNWG*FHQPCH
Trigger: GTGGCATGGTTGATGGAAGCAGCCCCAGTTCTTTAA...TTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCCCAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTTCCTGGCAAGACCAGTaGCTGTTTCACAGCTATCTG +
Preference number: 4 (lower is better)
Translates to: DPTGHRATWQVTSQSFHPSWQDQ*LFHSYL
Trigger: CAGATAGCTGTGAAACAGGCACTGGTCTTGCCAGGA...AGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp CCAGCAGAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTAACTTGGGACTGCCTTaGAATTCTTTTGGGGTGCTC +
Preference number: 4 (lower is better)
Translates to: PAEGRRGLDMFGPLFPVFNLGLP*NSFGVL
Trigger: GAGCACCCCAAAAGAATTGCAAGGCAGTCCCAAGTT...AAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTCTGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp AGATCAGTGTCAAACTGTACCCTTGAGTGTCCCCAAAGGTTCCAGCAGAGGGAAAGGGCCCGACCTGTCTaGTCTGGACCAAAGGAGATC +
Preference number: 4 (lower is better)
Translates to: RSVSNCTLECPQRFQQRERARPV*SGPKEI
Trigger: GATCTCCTTTGGTCCAGAGCAGACAGGTCGGGCCCT...TTCCCTCTGCTGGAACCTTTGGGGACACTCAAGGGTACAGTTTGACACTGATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACACAGACATGGAGTTTGTaGTTGGTCCCAACTTCCCAC +
Preference number: 4 (lower is better)
Translates to: GQPGRSQVNHFTLTSSSTQTWSL*LVPTSH
Trigger: GTGGGAAGTTGGGACCAAGCACAAACTCCATGTCTG...TGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp AAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGGTATTGCTGTGACAGGTAGTTCCAGGGGACTATaGCCAGTAGCTTTCCTGTTC +
Preference number: 4 (lower is better)
Translates to: KGASQSQESMVPGIAVTGSSRGL*PVAFLF
Trigger: GAACAGGAAAGCTACTGGGCATAGTCCCCTGGAACT...ACCTGTCACAGCAATACCTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GTGACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCTGCTCATGGCTTTCAGGCTaGACGCACACTGGAGCGAGA +
Preference number: 4 (lower is better)
Translates to: VTEGFSSVNFGGRQECSCSWLSG*THTGAR
Trigger: TCTCGCTCCAGTGTGCGTGCAGCCTGAAAGCCATGA...GCAGGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGTCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp TCAATCATTTCACCCTCACGTCGAGCAGCACAGCACTCAGTGGCTCTGACAACATCATGGCTTTCAGGCTaGACGCACACTGGAGCGAGA +
Preference number: 4 (lower is better)
Translates to: SIISPSRRAAQHSVALTTSWLSG*THTGAR
Trigger: TCTCGCTCCAGTGTGCGTGCAGCCTGAAAGCCATGA...TGTTGTCAGAGCCACTGAGTGCTGTGCTGCTCGACGTGAGGGTGAAATGATTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GAGATGCCCACTCCCATAGGGTCCAAAGTGACAGGGAGGATGTCAAGCAGAGGAGGGGGAAGGCAAGAGTaGTCCTGCCTAAAGAGTATT +
Preference number: 4 (lower is better)
Translates to: EMPTPIGSKVTGRMSSRGGGRQE*SCLKSI
Trigger: AATACTCTTTAGGCAGGAGCACTCTTGCCTTCCCCC...TCCTCTGCTTGACATCCTCCCTGTCACTTTGGACCCTATGGGAGTGGGCATCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GGCTGCCCAGGGAACTCACCCATGAATCCAGAAGCACTTAACACTGGTGGTGGTGGGGGAAGGCAAGAGTaGTCCTGCCTAAAGAGTATT +
Preference number: 4 (lower is better)
Translates to: GCPGNSPMNPEALNTGGGGGRQE*SCLKSI
Trigger: AATACTCTTTAGGCAGGAGCACTCTTGCCTTCCCCC...ACCACCACCAGTGTTAAGTGCTTCTGGATTCATGGGTGAGTTCCCTGGGCAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp CAAGTGACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCCGCAACCCCACTCCGTaGCACATCAGGCTCTGTCTT +
Preference number: 4 (lower is better)
Translates to: QVTEGFSSVNFGGRQECSRNPTP*HIRLCL
Trigger: AAGACAGAGCCTGATGTGGCACGGAGTGGGGTTGCG...GGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGTCACTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp CCAGCCGGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCAAGAATGCAACCTTCTTaGTTCAGTTTCAAGTCCCTC +
Preference number: 4 (lower is better)
Translates to: PAGDPTGHRATWQVTSQSRMQPS*FSFKSL
Trigger: GAGGGACTTGAAACTGAAGCAAGAAGGTTGCATTCT...TGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACCGGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GGGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCTCCCTTGGTGGAGAATaGAACCTTCTTGCTTCAGTT +
Preference number: 4 (lower is better)
Translates to: GQPNGLYPGNPSSKTRRVSLGGE*NLLASV
Trigger: AACTGAAGCAAGAAGGTTGCATTCTCCACCAAGGGA...GACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp AGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCCAAGTGACAGAGGGCTTTAGCGTTACTTTAACCCTGTaGTGGCTTCTTTCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: RKPLQQDQKGRQVTEGFSVTLTL*WLLSWP
Trigger: TGGCCAGGAAAGAAGCCAGCACAGGGTTAAAGTAAC...GCTAAAGCCCTCTGTCACTTGGCGACCCTTCTGGTCTTGCTGGAGGGGTTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp TGTAATCCATCCCAGTGCTTTGTGAAGCTGTGGTGGGAAGATCACTTGAGGCCAGTGAATGAACGAAGCTaGCCCAGACCCCCAGACGCT +
Preference number: 4 (lower is better)
Translates to: CNPSQCFVKLWWEDHLRPVNERS*PRPPDA
Trigger: AGCGTCTGGGGGTCTGGGGCAGCTTCGTTCATTCAC...TGGCCTCAAGTGATCTTCCCACCACAGCTTCACAAAGCACTGGGATGGATTACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000645035.1
ENST00000649901.1
CDS-3UTR GCA 90 bp TGTAATCCATCCCAGTGCTTTGTGAAGCTGTGGTGGGAAGATCACTTGAGGCCACTGGGAGTAAGCACTTaGTTCCCTCCACGCACCTGG +
Preference number: 4 (lower is better)
Translates to: CNPSQCFVKLWWEDHLRPLGVST*FPPRTW
Trigger: CCAGGTGCGTGGAGGGAAGCAAGTGCTTACTCCCAG...TGGCCTCAAGTGATCTTCCCACCACAGCTTCACAAAGCACTGGGATGGATTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649901.1
CDS-3UTR GCA 90 bp TTCACCACTCACAGTGCTGGCTTCATTAGACCCACAGCTCTCCACATCAGCCGTGGATGGCGAGACCACTaGAGGGCATCCTTCTGTAAT +
Preference number: 4 (lower is better)
Translates to: FTTHSAGFIRPTALHISRGWRDH*RASFCN
Trigger: ATTACAGAAGGATGCCCTGCAGTGGTCTCGCCATCC...ACGGCTGATGTGGAGAGCTGTGGGTCTAATGAAGCCAGCACTGTGAGTGGTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644587.1
CDS-3UTR CCA 90 bp GCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGTGCCTGTTTTGGTGTCATTaGAGCATCCGAGTAGTTTTC +
Preference number: 4 (lower is better)
Translates to: AGAPAPWWAMPGVTLTLCLFWCH*SIRVVF
Trigger: GAAAACTACTCGGATGCTCCAATGACACCAAAACAG...GCACAGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CAAGGCAAGGGAAAACACACACAGGGGCATCTACTTGCTGGAAACATGTTGGGATCCACTGTAGCTGGATaGCGAGACCACTGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: QGKGKHTQGHLLAGNMLGSTVAG*RDHCRA
Trigger: TGCCCTGCAGTGGTCTCGCCATCCAGCTACAGTGGA...TCCCAACATGTTTCCAGCAAGTAGATGCCCCTGTGTGTGTTTTCCCTTGCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp TTTGTTTGTTCGCCTGTGAGGAAGCTCTGTAGCTGTCCCTGGGATTGGAAAGAGATCAGCCGTGTCCTCTaGCTCCTCTCCCTCCACTGT +
Preference number: 4 (lower is better)
Translates to: FVCSPVRKLCSCPWDWKEISRVL*LLSLHC
Trigger: ACAGTGGAGGGAGAGGAGCCAGAGGACACGGCTGAT...CTCTTTCCAATCCCAGGGACAGCTACAGAGCTTCCTCACAGGCGAACAAACAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644587.1
CDS-3UTR CCA 90 bp TGTAGGAGGAGAGATGTGAAAAGCAAGATGCGTTTGCTCGGTGGCATGTGGGCACATTTGACCTGTGGCTaGCTTCCGGAAGCCTCTCAG +
Preference number: 4 (lower is better)
Translates to: CRRRDVKSKMRLLGGMWAHLTCG*LPEASQ
Trigger: CTGAGAGGCTTCCGGAAGCCAGCCACAGGTCAAATG...TGCCCACATGCCACCGAGCAAACGCATCTTGCTTTTCACATCTCTCCTCCTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000651418.1
CDS-3UTR CCA 90 bp TCAATCATTTCACCCTCACGTCGAGCAGCACAGCACTCAGTGGCTCTGACAACAGCTTCATTTGACCTGTaGCTGGCTTCCGGAAGCCTC +
Preference number: 4 (lower is better)
Translates to: SIISPSRRAAQHSVALTTASFDL*LASGSL
Trigger: GAGGCTTCCGGAAGCCAGCCACAGGTCAAATGAAGC...TGTTGTCAGAGCCACTGAGTGCTGTGCTGCTCGACGTGAGGGTGAAATGATTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
CDS-3UTR CCA 90 bp GAGAGGCAGGAGCAGGCATGGCTTTGTTTCTTCCCAAACCTGCCTGATGTCAAAGCTTCATTTGACCTGTaGCTGGCTTCCGGAAGCCTC +
Preference number: 4 (lower is better)
Translates to: ERQEQAWLCFFPNLPDVKASFDL*LASGSL
Trigger: GAGGCTTCCGGAAGCCAGCCACAGGTCAAATGAAGC...TTTGACATCAGGCAGGTTTGGGAAGAAACAAAGCCATGCCTGCTCCTGCCTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000651418.1
CDS-3UTR CCA 90 bp CAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGTGTGATGGTAAGGCATaGAAGGTCCGAGAGTTGATC +
Preference number: 4 (lower is better)
Translates to: QGIGQPGRSQVNHFTLTSCDGKA*KVRELI
Trigger: GATCAACTCTCGGACCTTCCATGCCTTACCATCACA...CGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp CCAGCAGAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTTGTGATGGTAAGGCATaGAAGGTCCGAGAGTTGATC +
Preference number: 4 (lower is better)
Translates to: PAEGRRGLDMFGPLFPVFCDGKA*KVRELI
Trigger: GATCAACTCTCGGACCTTCCATGCCTTACCATCACA...AAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTCTGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp CAGAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTAAAGAGGAGCTGCTGCTaGAAGTGTGATGGTAAGGCA +
Preference number: 4 (lower is better)
Translates to: QREEEDWTCLGPCSRSLVKRSCC*KCDGKA
Trigger: TGCCTTACCATCACACTTCCAGCAGCAGCTCCTCTT...TACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp GGCTGCCCAGGGAACTCACCCATGAATCCAGAAGCACTTAACACTGGTGGTGGTAAGAGGAGCTGCTGCTaGAAGTGTGATGGTAAGGCA +
Preference number: 4 (lower is better)
Translates to: GCPGNSPMNPEALNTGGGKRSCC*KCDGKA
Trigger: TGCCTTACCATCACACTTCCAGCAGCAGCTCCTCTT...ACCACCACCAGTGTTAAGTGCTTCTGGATTCATGGGTGAGTTCCCTGGGCAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp TCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGGCAATGACTCTTCTTTaGTCAAACCCAGCTTCTGTC +
Preference number: 4 (lower is better)
Translates to: SAGAPAPWWAMPGVTLTLAMTLL*SNPASV
Trigger: GACAGAAGCTGGGTTTGACCAAAGAAGAGTCATTGC...CAGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACAGCAATTTCAGCCTCCTCCTaGCCCACGTTCTGCTGCAAT +
Preference number: 4 (lower is better)
Translates to: QPGRSQVNHFTLTSSSTAISASS*PTFCCN
Trigger: ATTGCAGCAGAACGTGGGCCAGGAGGAGGCTGAAAT...TGCTGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp GTCAAAAGTACGTCAAAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGGTATTTCAGCCTCCTCCTaGCCCACGTTCTGCTGCAAT +
Preference number: 4 (lower is better)
Translates to: VKSTSKGASQSQESMVPGISASS*PTFCCN
Trigger: ATTGCAGCAGAACGTGGGCCAGGAGGAGGCTGAAAT...ACCTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTTTGACGTACTTTTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp AACAAGGCAAGGGAAAACACACACAGGGGCATCTACTTGCTGGAAACATGTTGGGATGTGCCTGGCAGATaGGGACTGCTCAGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: NKARENTHRGIYLLETCWDVPGR*GLLSPA
Trigger: AGCAGGGCTGAGCAGTCCCCATCTGCCAGGCACATC...CCAACATGTTTCCAGCAAGTAGATGCCCCTGTGTGTGTTTTCCCTTGCCTTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp GTGACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCTGCAGCCACAGACTCAACTaGGAATTCGGGACCCTCCAG +
Preference number: 4 (lower is better)
Translates to: VTEGFSSVNFGGRQECSCSHRLN*EFGTLQ
Trigger: CTGGAGGGTCCCGAATTCCCAGTTGAGTCTGTGGCT...GCAGGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGTCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp TCAATCATTTCACCCTCACGTCGAGCAGCACAGCACTCAGTGGCTCTGACAACAAGCCACAGACTCAACTaGGAATTCGGGACCCTCCAG +
Preference number: 4 (lower is better)
Translates to: SIISPSRRAAQHSVALTTSHRLN*EFGTLQ
Trigger: CTGGAGGGTCCCGAATTCCCAGTTGAGTCTGTGGCT...TGTTGTCAGAGCCACTGAGTGCTGTGCTGCTCGACGTGAGGGTGAAATGATTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp TGTAGGAGGAGAGATGTGAAAAGCAAGATGCGTTTGCTCGGTGGCATGTGGGCAAGCCACAGACTCAACTaGGAATTCGGGACCCTCCAG +
Preference number: 4 (lower is better)
Translates to: CRRRDVKSKMRLLGGMWASHRLN*EFGTLQ
Trigger: CTGGAGGGTCCCGAATTCCCAGTTGAGTCTGTGGCT...TGCCCACATGCCACCGAGCAAACGCATCTTGCTTTTCACATCTCTCCTCCTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp ATGTCAAAAGTACGTCAAAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGTTGTCTGGCTCAGCCTaGATCCGAGAAGCCACAGAC +
Preference number: 4 (lower is better)
Translates to: MSKVRQKEPHSPRRAWSQLSGSA*IREATD
Trigger: GTCTGTGGCTTCTCGGATCCAGGCTGAGCCAGACAA...CTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTTTGACGTACTTTTGACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp CTTTCACATACACAGGTGCGTGGAGATGCCCACTCCCATAGGGTCCAAAGTGACGCTAGGAATTCTGTCTaGAGATGCAGAGGCACGTGC +
Preference number: 4 (lower is better)
Translates to: LSHTQVRGDAHSHRVQSDARNSV*RCRGTC
Trigger: GCACGTGCCTCTGCATCTCCAGACAGAATTCCTAGC...GTCACTTTGGACCCTATGGGAGTGGGCATCTCCACGCACCTGTGTATGTGAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp AGGTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCTCCTCTTCTGATCCTTaGGTTCCTGATCCACAGTTT +
Preference number: 4 (lower is better)
Translates to: RSAGAPAPWWAMPGVTLTSSSDP*VPDPQF
Trigger: AAACTGTGGATCAGGAACCCAAGGATCAGAAGAGGA...GGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GCCGGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCTCTTTAGTGGGCTGTaGCTTTTCGGTGTGAACACT +
Preference number: 4 (lower is better)
Translates to: AGDPTGHRATWQVTSQSFLFSGL*LFGVNT
Trigger: AGTGTTCACACCGAAAAGCCACAGCCCACTAAAGAG...AAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACCGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp CAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACAGCAAAAGTTGAATCCGGATaGGCGGGACTTTGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: QPGRSQVNHFTLTSSSTAKVESG*AGLWAP
Trigger: AGGAGCCCAAAGTCCCGCCCATCCGGATTCAACTTT...TGCTGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp GGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACAGCACTCAGTATGGCAGTTCCGGCCTaGGTATGCTCCCCATTTAGA +
Preference number: 4 (lower is better)
Translates to: GRSQVNHFTLTSSSTALSMAVPA*VCSPFR
Trigger: TCTAAATGGGGAGCATACCCAGGCCGGAACTGCCAT...ACTGAGTGCTGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp AGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTAAACTCAGCTACTGAGGTTTaGGAGGACAGTAGGGGCAAG +
Preference number: 4 (lower is better)
Translates to: REEEDWTCLGPCSRSLVNSATEV*EDSRGK
Trigger: CTTGCCCCTACTGTCCTCCCAAACCTCAGTAGCTGA...GTTTACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GTCAAAAGTACGTCAAAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGGTTCAGCTACTGAGGTTTaGGAGGACAGTAGGGGCAAG +
Preference number: 4 (lower is better)
Translates to: VKSTSKGASQSQESMVPGSATEV*EDSRGK
Trigger: CTTGCCCCTACTGTCCTCCCAAACCTCAGTAGCTGA...ACCTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTTTGACGTACTTTTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GGCTGCCCAGGGAACTCACCCATGAATCCAGAAGCACTTAACACTGGTGGTGGTCACTTTCCCAGGAAGTaGTGCCAGACTCACATTCAG +
Preference number: 4 (lower is better)
Translates to: GCPGNSPMNPEALNTGGGHFPRK*CQTHIQ
Trigger: CTGAATGTGAGTCTGGCACCACTTCCTGGGAAAGTG...ACCACCACCAGTGTTAAGTGCTTCTGGATTCATGGGTGAGTTCCCTGGGCAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp AGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTAAACTGTCTGCAGGAACGGTaGGTCCTTGCTCCTCATCAT +
Preference number: 4 (lower is better)
Translates to: REEEDWTCLGPCSRSLVNCLQER*VLAPHH
Trigger: ATGATGAGGAGCAAGGACCCACCGTTCCTGCAGACA...GTTTACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACACCACTAGAGACGGAATaGGACCATTGTCTGCAGGAA +
Preference number: 4 (lower is better)
Translates to: GQPGRSQVNHFTLTSSSTPLETE*DHCLQE
Trigger: TTCCTGCAGACAATGGTCCCATTCCGTCTCTAGTGG...TGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGATTCAGGTGTGGAACTaGGGGTCACATTTACAGGAT +
Preference number: 4 (lower is better)
Translates to: GSPMGYTQETPPARPEGSIQVWN*GSHLQD
Trigger: ATCCTGTAAATGTGACCCCCAGTTCCACACCTGAAT...CGACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp AGGTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCATTCAGGTGTGGAACTaGGGGTCACATTTACAGGAT +
Preference number: 4 (lower is better)
Translates to: RSAGAPAPWWAMPGVTLTIQVWN*GSHLQD
Trigger: ATCCTGTAAATGTGACCCCCAGTTCCACACCTGAAT...GGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CCAGCCGGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATACCTCATCATTCGATaGGATGGGTATCCAATGCAA +
Preference number: 4 (lower is better)
Translates to: PAGDPTGHRATWQVTSQSYLIIR*DGYPMQ
Trigger: TTGCATTGGATACCCATCCCATCGAATGATGAGGTA...TGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACCGGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GGGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCCTCTGGATTCTGGTTTaGGCTGTTTCACTACCTCAT +
Preference number: 4 (lower is better)
Translates to: GQPNGLYPGNPSSKTRRVLWILV*AVSLPH
Trigger: ATGAGGTAGTGAAACAGCCCAAACCAGAATCCAGAG...GACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp TCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGGTGTTCTCTGGATTCTaGTTTGGGCTGTTTCACTAC +
Preference number: 4 (lower is better)
Translates to: SAGAPAPWWAMPGVTLTLVFSGF*FGLFHY
Trigger: GTAGTGAAACAGCCCAAACCAGAATCCAGAGAACAC...CAGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GCCTTGGGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAACTGGGGCTCAACAGATaGTATGTGTTCTCTGGATTC +
Preference number: 4 (lower is better)
Translates to: ALGSPMGYTQETPPARPELGLNR*YVFSGF
Trigger: GAATCCAGAGAACACATACCATCTGTTGAGCCCCAG...TTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCCCAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CAAGGCAAGGGAAAACACACACAGGGGCATCTACTTGCTGGAAACATGTTGGGAGCAATGCAGGAGGGGTaGGAGCAGCTTTCTCCCACT +
Preference number: 4 (lower is better)
Translates to: QGKGKHTQGHLLAGNMLGAMQEG*EQLSPT
Trigger: AGTGGGAGAAAGCTGCTCCCACCCCTCCTGCATTGC...TCCCAACATGTTTCCAGCAAGTAGATGCCCCTGTGTGTGTTTTCCCTTGCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp ACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCTGCCTAGCAATGCAGGAGGGGTaGGAGCAGCTTTCTCCCACT +
Preference number: 4 (lower is better)
Translates to: TEGFSSVNFGGRQECSCLAMQEG*EQLSPT
Trigger: AGTGGGAGAAAGCTGCTCCCACCCCTCCTGCATTGC...TAGGCAGGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GAGAATGCAACCTTCTTGCTTCAGTTTCAAGTCCCTCTGGGAGTCAGGCAGTCCCAGAGGCTGTATCCGTaGACTCACCGTGAGGACTCA +
Preference number: 4 (lower is better)
Translates to: ENATFLLQFQVPLGVRQSQRLYP*THREDS
Trigger: TGAGTCCTCACGGTGAGTCCACGGATACAGCCTCTG...GGACTGCCTGACTCCCAGAGGGACTTGAAACTGAAGCAAGAAGGTTGCATTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGTGCCAGATTGGTTCCAATTaGGTTTCTCATCCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: AGAPAPWWAMPGVTLTLCQIGSN*VSHPCP
Trigger: TGGACAAGGATGAGAAACCCAATTGGAACCAATCTG...GCACAGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTATTCACCTTGGACAGTaGGGCAGATTGGTTCCAATT +
Preference number: 4 (lower is better)
Translates to: VSRCTSPLVGNARSYFNPIHLGQ*GRLVPI
Trigger: AATTGGAACCAATCTGCCCCACTGTCCAAGGTGAAT...AGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACGAATCTGGGATCTTTTaGCGGACCGCACATACTCGA +
Preference number: 4 (lower is better)
Translates to: GDPTGHRATWQVTSQSFHESGIF*RTAHTR
Trigger: TCGAGTATGTGCGGTCCGCCAAAAGATCCCAGATTC...GTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp ACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCTGCCTACACACGGCTCTTGGCTaGTACTCAGTACTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: TEGFSSVNFGGRQECSCLHTALG*YSVLAS
Trigger: GCTGGCCAGTACTGAGTACCAGCCAAGAGCCGTGTG...TAGGCAGGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GGGGGTAGTGGAAGACTGGCATTTCTACTTAGTTCAGGTAGGTTAACTCCCTTGCTGAGGACCCAGGCATaGACAGGCACACGGCTCTTG +
Preference number: 4 (lower is better)
Translates to: GGSGRLAFLLSSGRLTPLLRTQA*TGTRLL
Trigger: CAAGAGCCGTGTGCCTGTCCATGCCTGGGTCCTCAG...CAAGGGAGTTAACCTACCTGAACTAAGTAGAAATGCCAGTCTTCCACTACCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACAGCAGACATGCTGTCATCGTaGGCTGGTGGAAGAACCTTC +
Preference number: 4 (lower is better)
Translates to: QPGRSQVNHFTLTSSSTADMLSS*AGGRTF
Trigger: GAAGGTTCTTCCACCAGCCCACGATGACAGCATGTC...TGCTGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTAAAGACATGCTGTCATCGTaGGCTGGTGGAAGAACCTTC +
Preference number: 4 (lower is better)
Translates to: EGRRGLDMFGPLFPVFGKDMLSS*AGGRTF
Trigger: GAAGGTTCTTCCACCAGCCCACGATGACAGCATGTC...TTTACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CCAGCAGAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTAGCGAGCCATGGCTCTaGTCTTTTGTAAGTGGTACT +
Preference number: 4 (lower is better)
Translates to: PAEGRRGLDMFGPLFPVFSEPWL*SFVSGT
Trigger: AGTACCACTTACAAAAGACCAGAGCCATGGCTCGCT...AAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTCTGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp AGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCCAAGTGACAGAGGGCTTTAGCAAGCCCTTAAAGAACTaGGGCTGCTTCCATCAACCA +
Preference number: 4 (lower is better)
Translates to: RKPLQQDQKGRQVTEGFSKPLKN*GCFHQP
Trigger: TGGTTGATGGAAGCAGCCCCAGTTCTTTAAGGGCTT...GCTAAAGCCCTCTGTCACTTGGCGACCCTTCTGGTCTTGCTGGAGGGGTTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp TCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGTGTTTCACAGCTATCTaGCAGAAGAGGCTCCTTCAA +
Preference number: 4 (lower is better)
Translates to: SAGAPAPWWAMPGVTLTLCFTAI*QKRLLQ
Trigger: TTGAAGGAGCCTCTTCTGCCAGATAGCTGTGAAACA...CAGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp AGGTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCGAGGGAGTCAAAACTTaGGACTGCCTTGCAATTCTT +
Preference number: 4 (lower is better)
Translates to: RSAGAPAPWWAMPGVTLTEGVKT*DCLAIL
Trigger: AAGAATTGCAAGGCAGTCCCAAGTTTTGACTCCCTC...GGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CCAGCAGAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGATTTGTCACTGGATaGAGGGAGTCAAAACTTGGG +
Preference number: 4 (lower is better)
Translates to: PAEGRRGLDMFGPLFPVFGFVTG*RESKLG
Trigger: CCCAAGTTTTGACTCCCTCCATCCAGTGACAAATCC...AAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTCTGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTAAACATGGAGTTTGTGCTTaGTCCCAACTTCCCACTGGG +
Preference number: 4 (lower is better)
Translates to: EGRRGLDMFGPLFPVFGKHGVCA*SQLPTG
Trigger: CCCAGTGGGAAGTTGGGACCAAGCACAAACTCCATG...TTTACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GTCAAAAGTACGTCAAAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGGTGTACCCCACCAGACATaGAGTTTGTGCTTGGTCCCA +
Preference number: 4 (lower is better)
Translates to: VKSTSKGASQSQESMVPGVPHQT*SLCLVP
Trigger: TGGGACCAAGCACAAACTCCATGTCTGGTGGGGTAC...ACCTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTTTGACGTACTTTTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GTCAAAAGTACGTCAAAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGGTAAAGGCATGTGGCTTTaGAGCCCAGTCTTCCCTTGG +
Preference number: 4 (lower is better)
Translates to: VKSTSKGASQSQESMVPGKGMWL*SPVFPW
Trigger: CCAAGGGAAGACTGGGCTCCAAAGCCACATGCCTTT...ACCTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTTTGACGTACTTTTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCCAACCAAAGTTTGCTTTGTaGCTCAGCTGCACCACACTT +
Preference number: 4 (lower is better)
Translates to: AQWVIPRKPLQQDQKGRQPKFAL*LSCTTL
Trigger: AAGTGTGGTGCAGCTGAGCCACAAAGCAAACTTTGG...TTGGCGACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGCCAAAGTTTGCTTTGTaGCTCAGCTGCACCACACTT +
Preference number: 4 (lower is better)
Translates to: QGIGQPGRSQVNHFTLTSPKFAL*LSCTTL
Trigger: AAGTGTGGTGCAGCTGAGCCACAAAGCAAACTTTGG...CGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CCGGTCTTTGGTAAACAGACGCTTAAGTTGACAACTTGGACTTGGCCAATACTGAGAGCTCAGGCTGGCTaGCCTTGGGCAGCCCAATGG +
Preference number: 4 (lower is better)
Translates to: PVFGKQTLKLTTWTWPILRAQAG*PWAAQW
Trigger: CCATTGGGCTGCCCAAGGCCAGCCAGCCTGAGCTCT...CAGTATTGGCCAAGTCCAAGTTGTCAACTTAAGCGTCTGTTTACCAAAGACCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GGGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGGGGTAGTGGAAGACTaGCATTTCTACTTAGTTCAG +
Preference number: 4 (lower is better)
Translates to: GQPNGLYPGNPSSKTRRVGVVED*HFYLVQ
Trigger: CTGAACTAAGTAGAAATGCCAGTCTTCCACTACCCC...GACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACATCACCTGCAAACATCTaGACGGCTGACTCACAAGGT +
Preference number: 4 (lower is better)
Translates to: GQPGRSQVNHFTLTSSSTSPANI*TADSQG
Trigger: ACCTTGTGAGTCAGCCGTCCAGATGTTTGCAGGTGA...TGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CTTGGTGGAGAATGCAACCTTCTTGCTTCAGTTTCAAGTCCCTCTGGGAGTCAGGATGCGTTTGCTCGGTaGCATGTGGGCAGGCTGACT +
Preference number: 4 (lower is better)
Translates to: LGGECNLLASVSSPSGSQDAFAR*HVGRLT
Trigger: AGTCAGCCTGCCCACATGCCACCGAGCAAACGCATC...CTGACTCCCAGAGGGACTTGAAACTGAAGCAAGAAGGTTGCATTCTCCACCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTAGGCAGGAGCAGGCATaGCTTTGTTTCTTCCCAAAC +
Preference number: 4 (lower is better)
Translates to: DPTGHRATWQVTSQSFHPRQEQA*LCFFPN
Trigger: GTTTGGGAAGAAACAAAGCCATGCCTGCTCCTGCCT...AGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp AAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGGTATTGCTGTGACAGGTAGGCAGGAGCAGGCATaGCTTTGTTTCTTCCCAAAC +
Preference number: 4 (lower is better)
Translates to: KGASQSQESMVPGIAVTGRQEQA*LCFFPN
Trigger: GTTTGGGAAGAAACAAAGCCATGCCTGCTCCTGCCT...ACCTGTCACAGCAATACCTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp GGCTGCCCAGGGAACTCACCCATGAATCCAGAAGCACTTAACACTGGTGGTGGTAGGCAGGAGCAGGCATaGCTTTGTTTCTTCCCAAAC +
Preference number: 4 (lower is better)
Translates to: GCPGNSPMNPEALNTGGGRQEQA*LCFFPN
Trigger: GTTTGGGAAGAAACAAAGCCATGCCTGCTCCTGCCT...ACCACCACCAGTGTTAAGTGCTTCTGGATTCATGGGTGAGTTCCCTGGGCAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp CAGGTCCAGCCGGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCTTGACAACTTGGACTTaGCCAATACTGCATTCTAAA +
Preference number: 4 (lower is better)
Translates to: QVQPVTQQGIGQPGRSQVLTTWT*PILHSK
Trigger: TTTAGAATGCAGTATTGGCCAAGTCCAAGTTGTCAA...GACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACCGGCTGGACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp CTTTCACATACACAGGTGCGTGGAGATGCCCACTCCCATAGGGTCCAAAGTGACAGGGAAGAAGAGGACTaGACATGTTTGGGCCCCTGT +
Preference number: 4 (lower is better)
Translates to: LSHTQVRGDAHSHRVQSDREEED*TCLGPC
Trigger: ACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCT...GTCACTTTGGACCCTATGGGAGTGGGCATCTCCACGCACCTGTGTATGTGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACAGCACTCAGTAGGGAAGAAGAGGACTaGACATGTTTGGGCCCCTGT +
Preference number: 4 (lower is better)
Translates to: GRSQVNHFTLTSSSTALSREEED*TCLGPC
Trigger: ACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCT...ACTGAGTGCTGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACAGCACTCTGGGCAGCCTCATaGACCAGATCAGTGTCAAAC +
Preference number: 4 (lower is better)
Translates to: QPGRSQVNHFTLTSSSTALWAAS*TRSVSN
Trigger: GTTTGACACTGATCTGGTCCATGAGGCTGCCCAGAG...TGCTGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
3UTR CAA 72 bp CAGCCTCATGGACCAGATCAGTGTCAAACTGTACCCTaGAGTGTCCCCAAAGGTTCCAGCAGAGGGAAGAAG +
Preference number: 4 (lower is better)
Translates to: QPHGPDQCQTVP*SVPKGSSRGKK
Trigger: CTTCTTCCCTCTGCTGGAACCTTTGGGGACACTCAAGGGTACAGTTTGACACTGATCTGGTCCATGAGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR TCA 90 bp GGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACAGTCCTCTGACGCTCTaGACACAAAATTCACAACCC +
Preference number: 4 (lower is better)
Translates to: GDPTGHRATWQVTSQSFHSPLTL*TQNSQP
Trigger: GGGTTGTGAATTTTGTGTTCAGAGCGTCAGAGGACT...GTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306058.9
CDS-3UTR TCA 90 bp GAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTAAATTGTTTGTTCGCCTGTaGGGAAGCTCTGTAGCTGTC +
Preference number: 4 (lower is better)
Translates to: EGRRGLDMFGPLFPVFGKLFVRL*GSSVAV
Trigger: GACAGCTACAGAGCTTCCTCACAGGCGAACAAACAA...TTTACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR TCA 90 bp GCAAGAACCCTCAACTCTGTAATAAGTCGAAATACAAGATATAAGGCAGGAAACGGGCAGGGTCCTGGGTaGCCTCGGCCTGGCCACGAA +
Preference number: 4 (lower is better)
Translates to: ARTLNSVISRNTRYKAGNGQGPG*PRPGHE
Trigger: TTCGTGGCCAGGCCGAGGTCACCCAGGACCCTGCCC...GTTTCCTGCCTTATATCTTGTATTTCGACTTATTACAGAGTTGAGGGTTCTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000651418.1
CDS-3UTR TCA 90 bp GGGGGTAGTGGAAGACTGGCATTTCTACTTAGTTCAGGTAGGTTAACTCCCTTGTTAGTGCACTGCTGCTaGGACGCAACAGGCCATCCG +
Preference number: 4 (lower is better)
Translates to: GGSGRLAFLLSSGRLTPLLVHCC*DATGHP
Trigger: CGGATGGCCTGTTGCGTCTCAGCAGCAGTGCACTAA...CAAGGGAGTTAACCTACCTGAACTAAGTAGAAATGCCAGTCTTCCACTACCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp GCCTTGGGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAACTGACTTGCATCTCATaGGTAAATTCACCATCAGCC +
Preference number: 4 (lower is better)
Translates to: ALGSPMGYTQETPPARPELTCIS*VNSPSA
Trigger: GGCTGATGGTGAATTTACTCATGAGATGCAAGTCAG...TTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCCCAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp CAGAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTACACGTTCTGCTGCAATaGCTCTTCTTTGGTCAAACC +
Preference number: 4 (lower is better)
Translates to: QREEEDWTCLGPCSRSLVHVLLQ*LFFGQT
Trigger: GGTTTGACCAAAGAAGAGTCATTGCAGCAGAACGTG...TACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR TCA 90 bp GTGACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCTGCCACACAAGCCACTTTTaGTTTCAGCCTCCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: VTEGFSSVNFGGRQECSCHTSHF*FQPPPG
Trigger: GCCAGGAGGAGGCTGAAATCAAAAGTGGCTTGTGTG...GCAGGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp CAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACAGCAACGCTGTATACGCACTaGTTCTCCTGGGACACACAA +
Preference number: 4 (lower is better)
Translates to: QPGRSQVNHFTLTSSSTATLYTH*FSWDTQ
Trigger: TTGTGTGTCCCAGGAGAATCAGTGCGTATACAGCGT...TGCTGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR TCA 90 bp GAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTAAAGTAGAGGGGAACATCTaGGGCCACAGATTTTGCATC +
Preference number: 4 (lower is better)
Translates to: EGRRGLDMFGPLFPVFGKVEGNI*GHRFCI
Trigger: GATGCAAAATCTGTGGCCTCAGATGTTCCCCTCTAC...TTTACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR TCA 90 bp AGTGGAAGACTGGCATTTCTACTTAGTTCAGGTAGGTTAACTCCCTTGGTGGAGACTCCGTGGTGGGGATaGTCCGGGGGCATATCTGGT +
Preference number: 4 (lower is better)
Translates to: SGRLAFLLSSGRLTPLVETPWWG*SGGISG
Trigger: ACCAGATATGCCCCCGGATCATCCCCACCACGGAGT...CTCCACCAAGGGAGTTAACCTACCTGAACTAAGTAGAAATGCCAGTCTTCCACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp CATGGCTTTGTTTCTTCCCAAACCTGCCTGATGTCAAAAGTACGTCAAAAGGAGTCTCTATGGCAGTGGTaGCCTCTCGCCCCTCGGACC +
Preference number: 4 (lower is better)
Translates to: HGFVSSQTCLMSKVRQKESLWQW*PLAPRT
Trigger: GGTCCGAGGGGCGAGAGGTCACCACTGCCATAGAGA...CTCCTTTTGACGTACTTTTGACATCAGGCAGGTTTGGGAAGAAACAAAGCCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp ATGTCAAAAGTACGTCAAAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGTGGCACAGTCCAGAGTaGAGTAAGGCTGTCAAGAGG +
Preference number: 4 (lower is better)
Translates to: MSKVRQKEPHSPRRAWSQWHSPE*SKAVKR
Trigger: CCTCTTGACAGCCTTACTTCACTCTGGACTGTGCCA...CTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTTTGACGTACTTTTGACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp GAGAATGCAACCTTCTTGCTTCAGTTTCAAGTCCCTCTGGGAGTCAGGCAGTCCTGGCACAGTCCAGAGTaGAGTAAGGCTGTCAAGAGG +
Preference number: 4 (lower is better)
Translates to: ENATFLLQFQVPLGVRQSWHSPE*SKAVKR
Trigger: CCTCTTGACAGCCTTACTTCACTCTGGACTGTGCCA...GGACTGCCTGACTCCCAGAGGGACTTGAAACTGAAGCAAGAAGGTTGCATTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp ACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCTGCCTACTGTCCTCCGTGAGGTaGCCTTCAAAGTCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: TEGFSSVNFGGRQECSCLLSSVR*PSKSEA
Trigger: AGCCTCTGACTTTGAAGGTCACCTCACGGAGGACAG...TAGGCAGGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp CAAGTGACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCCACTGCTGTCCTCCGTaGGGTGACCTTCAAAGTCAG +
Preference number: 4 (lower is better)
Translates to: QVTEGFSSVNFGGRQECSHCCPP*GDLQSQ
Trigger: CTGACTTTGAAGGTCACCTCACGGAGGACAGCAGTG...GGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGTCACTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp AGTGGAAGACTGGCATTTCTACTTAGTTCAGGTAGGTTAACTCCCTTGGTGGAGGTTAGTGGCCTCCACTaGGGACCCAGGCATGGACAG +
Preference number: 4 (lower is better)
Translates to: SGRLAFLLSSGRLTPLVEVSGLH*GPRHGQ
Trigger: CTGTCCATGCCTGGGTCCTCAGTGGAGGCCACTAAC...CTCCACCAAGGGAGTTAACCTACCTGAACTAAGTAGAAATGCCAGTCTTCCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp GTGACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCTGCTACTTGTGGGGATTCTaGCATGCTGTCATCGTGGGC +
Preference number: 4 (lower is better)
Translates to: VTEGFSSVNFGGRQECSCYLWGF*HAVIVG
Trigger: GCCCACGATGACAGCATGTCAGAATCCCCACAAGTA...GCAGGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp CCAGCAGAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGCACGGACTTCCTTCTaGTCTTCACAACTAAAGGAA +
Preference number: 4 (lower is better)
Translates to: PAEGRRGLDMFGPLFPVFARTSF*SSQLKE
Trigger: TTCCTTTAGTTGTGAAGATCAGAAGGAAGTCCGTGC...AAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTCTGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp GCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCCAAGATCACATTTGGAGATaGGAAACGAGGTGTTCTCGA +
Preference number: 4 (lower is better)
Translates to: AQWVIPRKPLQQDQKGRQDHIWR*ETRCSR
Trigger: TCGAGAACACCTCGTTTCTCATCTCCAAATGTGATC...TTGGCGACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp AATCACCACATCATTCCCAACTTGTCACTCATGCTTCAGATGACGAAAATGCCAGCTCCAGAGGCTCACTaGGCCCCTTCCCTGGCTCTC +
Preference number: 4 (lower is better)
Translates to: NHHIIPNLSLMLQMTKMPAPEAH*APSLAL
Trigger: GAGAGCCAGGGAAGGGGCTCAGTGAGCCTCTGGAGC...TGGCATTTTCGTCATCTGAAGCATGAGTGACAAGTTGGGAATGATGTGGTGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp CAAGTGACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCCCAATACAGTCATCGTaGCAGAACGCACCGCAGCCT +
Preference number: 4 (lower is better)
Translates to: QVTEGFSSVNFGGRQECSPIQSS*QNAPQP
Trigger: AGGCTGCGGTGCGTTCTGTCACGATGACTGTATTGG...GGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGTCACTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp CAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGCAATACACAGAGCTTTaGGGGTCCAATACAGTCATC +
Preference number: 4 (lower is better)
Translates to: QGIGQPGRSQVNHFTLTSQYTEL*GSNTVI
Trigger: GATGACTGTATTGGACCCTCAAAGCTCTGTGTATTG...CGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp GGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCAGGGAACTCACCCATaGATCCAGAAGCACTTAACA +
Preference number: 4 (lower is better)
Translates to: GDPTGHRATWQVTSQSFHQGTHP*IQKHLT
Trigger: TGTTAAGTGCTTCTGGATTCATGGGTGAGTTCCCTG...GTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR TCA 90 bp CTTCCTGGGGGCTGCCCAGGGAACTCACCCATGAATCCAGAAGCACTTAACACTCAGGGAACTCACCCATaGATCCAGAAGCACTTAACA +
Preference number: 4 (lower is better)
Translates to: LPGGCPGNSPMNPEALNTQGTHP*IQKHLT
Trigger: TGTTAAGTGCTTCTGGATTCATGGGTGAGTTCCCTG...AGTGTTAAGTGCTTCTGGATTCATGGGTGAGTTCCCTGGGCAGCCCCCAGGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR TCA 90 bp AGTGGAAGACTGGCATTTCTACTTAGTTCAGGTAGGTTAACTCCCTTGGTGGAGTGCTGTGACAGGTGGTaGCCCTGGAGCCAGATCTGG +
Preference number: 4 (lower is better)
Translates to: SGRLAFLLSSGRLTPLVECCDRW*PWSQIW
Trigger: CCAGATCTGGCTCCAGGGTCACCACCTGTCACAGCA...CTCCACCAAGGGAGTTAACCTACCTGAACTAAGTAGAAATGCCAGTCTTCCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp CTGGCATTTCTACTTAGTTCAGGTAGGTTAACTCCCTTGGTGGAGAATGCAACCTGCTGTGACAGGTGGTaGCCCTGGAGCCAGATCTGG +
Preference number: 4 (lower is better)
Translates to: LAFLLSSGRLTPLVENATCCDRW*PWSQIW
Trigger: CCAGATCTGGCTCCAGGGTCACCACCTGTCACAGCA...GGTTGCATTCTCCACCAAGGGAGTTAACCTACCTGAACTAAGTAGAAATGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp CACAACGAATATCAGAGAAGTGATGCCTATGGATGTAAAAGGCCAATGAACAAGGCTCTGCTGAGGGACTaGGACAGGACCGACGGCGGG +
Preference number: 4 (lower is better)
Translates to: HNEYQRSDAYGCKRPMNKALLRD*DRTDGG
Trigger: CCCGCCGTCGGTCCTGTCTCAGTCCCTCAGCAGAGC...CTTGTTCATTGGCCTTTTACATCCATAGGCATCACTTCTCTGATATTCGTTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542461.5
ENST00000646367.1
CDS-3UTR TCA 90 bp TGTAATCCATCCCAGTGCTTTGTGAAGCTGTGGTGGGAAGATCACTTGAGGCCATGCCATTGGCGTCCTTaGATGTGGGGTCGCTTTTCC +
Preference number: 4 (lower is better)
Translates to: CNPSQCFVKLWWEDHLRPCHWRP*MWGRFS
Trigger: GGAAAAGCGACCCCACATTCAAGGACGCCAATGGCA...TGGCCTCAAGTGATCTTCCCACCACAGCTTCACAAAGCACTGGGATGGATTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000645035.1
ENST00000649901.1
CDS-3UTR TCA 90 bp ACCTGTAATCCATCCCAGTGCTTTGTGAAGCTGTGGTGGGAAGATCACTTGAGGTGCCATTGGCGTCCTTaGATGTGGGGTCGCTTTTCC +
Preference number: 4 (lower is better)
Translates to: TCNPSQCFVKLWWEDHLRCHWRP*MWGRFS
Trigger: GGAAAAGCGACCCCACATTCAAGGACGCCAATGGCA...CCTCAAGTGATCTTCCCACCACAGCTTCACAAAGCACTGGGATGGATTACAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000645035.1
ENST00000649901.1
CDS-3UTR GCA 90 bp GTCAAAAGTACGTCAAAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGGTAGGAAGAGGAGCTGCTaGTGGAAGTGTGATGGTAAG +
Preference number: 4 (lower is better)
Translates to: VKSTSKGASQSQESMVPGRKRSC*WKCDGK
Trigger: CTTACCATCACACTTCCAGCAGCAGCTCCTCTTCCT...ACCTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTTTGACGTACTTTTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR GCA 90 bp GAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTAAAGAGCGTTTCTTAAAATaGCCATCTCGCTGTCGGGTG +
Preference number: 4 (lower is better)
Translates to: EGRRGLDMFGPLFPVFGKERFLK*PSRCRV
Trigger: CACCCGACAGCGAGATGGGCATTTTAAGAAACGCTC...TTTACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR GCA 90 bp CCGGTCTTTGGTAAACAGACGCTTAAGTTGACAACTTGGACTTGGCCAATACTGGGGACTGCTCAGCCCTaGTGGGTCAGTCTTAGCCTC +
Preference number: 4 (lower is better)
Translates to: PVFGKQTLKLTTWTWPILGTAQP*WVSLSL
Trigger: GAGGCTAAGACTGACCCAGCAGGGCTGAGCAGTCCC...CAGTATTGGCCAAGTCCAAGTTGTCAACTTAAGCGTCTGTTTACCAAAGACCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR GCA 90 bp AGTTCAGGTAGGTTAACTCCCTTGGTGGAGAATGCAACCTTCTTGCTTCAGTTTCTGGCAGATGGGGACTaGTCAGCCCTGCTGGGTCAG +
Preference number: 4 (lower is better)
Translates to: SSGRLTPLVENATFLLQFLADGD*SALLGQ
Trigger: CTGACCCAGCAGGGCTGAGCAGTCCCCATCTGCCAG...AAACTGAAGCAAGAAGGTTGCATTCTCCACCAAGGGAGTTAACCTACCTGAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACAATTCTGTCTGGAGATaGAGAGGCACGTGCCAAGTT +
Preference number: 4 (lower is better)
Translates to: GDPTGHRATWQVTSQSFHNSVWR*RGTCQV
Trigger: AACTTGGCACGTGCCTCTGCATCTCCAGACAGAATT...GTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR GCA 90 bp TGTAGGAGGAGAGATGTGAAAAGCAAGATGCGTTTGCTCGGTGGCATGTGGGCAGATGCAGAGGCCGCCTaGTCAAAGGATTTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: CRRRDVKSKMRLLGGMWADAEAA*SKDFLF
Trigger: GAAGAGGAAATCCTTTGAGCAGGCGGCCTCTGCATC...TGCCCACATGCCACCGAGCAAACGCATCTTGCTTTTCACATCTCTCCTCCTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR GCA 90 bp CCGGTCTTTGGTAAACAGACGCTTAAGTTGACAACTTGGACTTGGCCAATACTGCTCGCCCCTCGGACCTaGAGAGCACGGGCTTTAATG +
Preference number: 4 (lower is better)
Translates to: PVFGKQTLKLTTWTWPILLAPRT*RARALM
Trigger: CATTAAAGCCCGTGCTCTGCAGGTCCGAGGGGCGAG...CAGTATTGGCCAAGTCCAAGTTGTCAACTTAAGCGTCTGTTTACCAAAGACCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp AGTTCAGGTAGGTTAACTCCCTTGGTGGAGAATGCAACCTTCTTGCTTCAGTTTCACTGCTGCTGCCTCTaGCACCTCCCTCATCGGTGG +
Preference number: 4 (lower is better)
Translates to: SSGRLTPLVENATFLLQFHCCCL*HLPHRW
Trigger: CCACCGATGAGGGAGGTGGCAGAGGCAGCAGCAGTG...AAACTGAAGCAAGAAGGTTGCATTCTCCACCAAGGGAGTTAACCTACCTGAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GGGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGGGATGGGTATCCAATaGAAAGAACTGTTAGAAACG +
Preference number: 4 (lower is better)
Translates to: GQPNGLYPGNPSSKTRRVGMGIQ*KELLET
Trigger: CGTTTCTAACAGTTCTTTGCATTGGATACCCATCCC...GACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACAGCACTCAGTCCTGTTGACAGTAACTaGCATTGCTGTCACTGCCTC +
Preference number: 4 (lower is better)
Translates to: GRSQVNHFTLTSSSTALSPVDSN*HCCHCL
Trigger: GAGGCAGTGACAGCAATGGCAGTTACTGTCAACAGG...ACTGAGTGCTGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp CTTTCACATACACAGGTGCGTGGAGATGCCCACTCCCATAGGGTCCAAAGTGACCCTGTTGACAGTAACTaGCATTGCTGTCACTGCCTC +
Preference number: 4 (lower is better)
Translates to: LSHTQVRGDAHSHRVQSDPVDSN*HCCHCL
Trigger: GAGGCAGTGACAGCAATGGCAGTTACTGTCAACAGG...GTCACTTTGGACCCTATGGGAGTGGGCATCTCCACGCACCTGTGTATGTGAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTAAACCTGTTGACAGTAACTaGCATTGCTGTCACTGCCTC +
Preference number: 4 (lower is better)
Translates to: EGRRGLDMFGPLFPVFGKPVDSN*HCCHCL
Trigger: GAGGCAGTGACAGCAATGGCAGTTACTGTCAACAGG...TTTACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GTCAAAAGTACGTCAAAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGGTACCGTGAGGACTCAGTaGTTCAGAGTCTCCGTTGAT +
Preference number: 4 (lower is better)
Translates to: VKSTSKGASQSQESMVPGTVRTQ*FRVSVD
Trigger: ATCAACGGAGACTCTGAAGCACTGAGTCCTCACGGT...ACCTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTTTGACGTACTTTTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp CAAGTGACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCGTGGGGATTCTGACATaGTGTCATCGTGGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: QVTEGFSSVNFGGRQECSVGILT*CHRGLV
Trigger: CACCAGCCCACGATGACAGCATGTCAGAATCCCCAC...GGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGTCACTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp ACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCTGCCTAGTGGGGATTCTGACATaGTGTCATCGTGGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: TEGFSSVNFGGRQECSCLVGILT*CHRGLV
Trigger: CACCAGCCCACGATGACAGCATGTCAGAATCCCCAC...TAGGCAGGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTAAACATGTAAAGATCCCATaGGTAGCGAGCCATGGCTCT +
Preference number: 4 (lower is better)
Translates to: EGRRGLDMFGPLFPVFGKHVKIP*VASHGS
Trigger: AGAGCCATGGCTCGCTACGCATGGGATCTTTACATG...TTTACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp AAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGGTATTGCTGTGACAGGTTTAAAGAACTGGGGCTaGTTCCATCAACCATGCCAC +
Preference number: 4 (lower is better)
Translates to: KGASQSQESMVPGIAVTGLKNWG*FHQPCH
Trigger: GTGGCATGGTTGATGGAAGCAGCCCCAGTTCTTTAA...ACCTGTCACAGCAATACCTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp CTTCCTGGGGGCTGCCCAGGGAACTCACCCATGAATCCAGAAGCACTTAACACTAACTTGGGACTGCCTTaGAATTCTTTTGGGGTGCTC +
Preference number: 4 (lower is better)
Translates to: LPGGCPGNSPMNPEALNTNLGLP*NSFGVL
Trigger: GAGCACCCCAAAAGAATTGCAAGGCAGTCCCAAGTT...AGTGTTAAGTGCTTCTGGATTCATGGGTGAGTTCCCTGGGCAGCCCCCAGGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp CATGGCTTTGTTTCTTCCCAAACCTGCCTGATGTCAAAAGTACGTCAAAAGGAGGGGGCGCTGAAGGGTTaGAGCCACATTCCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: HGFVSSQTCLMSKVRQKEGALKG*SHIPRA
Trigger: GGCTCTGGGAATGTGGCTGCAACCCTTCAGCGCCCC...CTCCTTTTGACGTACTTTTGACATCAGGCAGGTTTGGGAAGAAACAAAGCCATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTAAACAGACATGGAGTTTGTaGTTGGTCCCAACTTCCCAC +
Preference number: 4 (lower is better)
Translates to: EGRRGLDMFGPLFPVFGKQTWSL*LVPTSH
Trigger: GTGGGAAGTTGGGACCAAGCACAAACTCCATGTCTG...TTTACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp CTTGGTGGAGAATGCAACCTTCTTGCTTCAGTTTCAAGTCCCTCTGGGAGTCAGGCTTTGTGGCTCAGCTaGACCACACTTCCAGCAAGG +
Preference number: 4 (lower is better)
Translates to: LGGECNLLASVSSPSGSQALWLS*TTLPAR
Trigger: CCTTGCTGGAAGTGTGGTGCAGCTGAGCCACAAAGC...CTGACTCCCAGAGGGACTTGAAACTGAAGCAAGAAGGTTGCATTCTCCACCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp CAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACAGCAGGGGGAAGGCAAGAGTaGTCCTGCCTAAAGAGTATT +
Preference number: 4 (lower is better)
Translates to: QPGRSQVNHFTLTSSSTAGGRQE*SCLKSI
Trigger: AATACTCTTTAGGCAGGAGCACTCTTGCCTTCCCCC...TGCTGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGAGAATGCAACCTTCTTaGTTCAGTTTCAAGTCCCTC +
Preference number: 4 (lower is better)
Translates to: GSPMGYTQETPPARPEGSRMQPS*FSFKSL
Trigger: GAGGGACTTGAAACTGAAGCAAGAAGGTTGCATTCT...CGACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp ATGTCAAAAGTACGTCAAAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGTTTCACATACACAGGTaGGTGGAGATGCCCACTCCC +
Preference number: 4 (lower is better)
Translates to: MSKVRQKEPHSPRRAWSQFHIHR*VEMPTP
Trigger: GGGAGTGGGCATCTCCACGCACCTGTGTATGTGAAA...CTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTTTGACGTACTTTTGACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GAGAGGCAGGAGCAGGCATGGCTTTGTTTCTTCCCAAACCTGCCTGATGTCAAATTTCACATACACAGGTaGGTGGAGATGCCCACTCCC +
Preference number: 4 (lower is better)
Translates to: ERQEQAWLCFFPNLPDVKFHIHR*VEMPTP
Trigger: GGGAGTGGGCATCTCCACGCACCTGTGTATGTGAAA...TTTGACATCAGGCAGGTTTGGGAAGAAACAAAGCCATGCCTGCTCCTGCCTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GGGGGTAGTGGAAGACTGGCATTTCTACTTAGTTCAGGTAGGTTAACTCCCTTGTCCACTGTAGCTGGATaGCGAGACCACTGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: GGSGRLAFLLSSGRLTPLSTVAG*RDHCRA
Trigger: TGCCCTGCAGTGGTCTCGCCATCCAGCTACAGTGGA...CAAGGGAGTTAACCTACCTGAACTAAGTAGAAATGCCAGTCTTCCACTACCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp TGTAGGAGGAGAGATGTGAAAAGCAAGATGCGTTTGCTCGGTGGCATGTGGGCAAGCTGTCCCTGGGATTaGAAAGAGGTCGACTCTGAG +
Preference number: 4 (lower is better)
Translates to: CRRRDVKSKMRLLGGMWASCPWD*KEVDSE
Trigger: CTCAGAGTCGACCTCTTTCCAATCCCAGGGACAGCT...TGCCCACATGCCACCGAGCAAACGCATCTTGCTTTTCACATCTCTCCTCCTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp GTGACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCTGCCTCTGTAGCTGTCCCTaGGATTGGAAAGAGGTCGAC +
Preference number: 4 (lower is better)
Translates to: VTEGFSSVNFGGRQECSCLCSCP*DWKEVD
Trigger: GTCGACCTCTTTCCAATCCCAGGGACAGCTACAGAG...GCAGGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp ATGTCAAAAGTACGTCAAAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGCTCTGTAGCTGTCCCTaGGATTGGAAAGAGGTCGAC +
Preference number: 4 (lower is better)
Translates to: MSKVRQKEPHSPRRAWSQLCSCP*DWKEVD
Trigger: GTCGACCTCTTTCCAATCCCAGGGACAGCTACAGAG...CTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTTTGACGTACTTTTGACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp GCAAGAACCCTCAACTCTGTAATAAGTCGAAATACAAGATATAAGGCAGGAAACAGCGGGGCAGGGTCCTaGGTGACCTCGGCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: ARTLNSVISRNTRYKAGNSGAGS*VTSAWP
Trigger: TGGCCAGGCCGAGGTCACCCAGGACCCTGCCCCGCT...GTTTCCTGCCTTATATCTTGTATTTCGACTTATTACAGAGTTGAGGGTTCTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000651418.1
CDS-3UTR CCA 90 bp CAAGTGACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCCATTTGACCTGTGGCTaGCTTCCGGAAGCCTCTCAG +
Preference number: 4 (lower is better)
Translates to: QVTEGFSSVNFGGRQECSHLTCG*LPEASQ
Trigger: CTGAGAGGCTTCCGGAAGCCAGCCACAGGTCAAATG...GGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGTCACTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
CDS-3UTR CCA 90 bp CCAGCAGAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGCAATGACTCTTCTTTaGTCAAACCCAGCTTCTGTC +
Preference number: 4 (lower is better)
Translates to: PAEGRRGLDMFGPLFPVFAMTLL*SNPASV
Trigger: GACAGAAGCTGGGTTTGACCAAAGAAGAGTCATTGC...AAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTCTGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp AGTGGAAGACTGGCATTTCTACTTAGTTCAGGTAGGTTAACTCCCTTGGTGGAGTCGCTGTCGGGTGGCTaGACCACGCTGTATACGCAC +
Preference number: 4 (lower is better)
Translates to: SGRLAFLLSSGRLTPLVESLSGG*TTLYTH
Trigger: GTGCGTATACAGCGTGGTCCAGCCACCCGACAGCGA...CTCCACCAAGGGAGTTAACCTACCTGAACTAAGTAGAAATGCCAGTCTTCCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTTCTGGTTCGGAGATCTaGCCGAGAGCGTTTCTTAAA +
Preference number: 4 (lower is better)
Translates to: DPTGHRATWQVTSQSFHPSGSEI*PRAFLK
Trigger: TTTAAGAAACGCTCTCGGCCAGATCTCCGAACCAGA...AGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp GGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACTCTGGTTCGGAGATCTaGCCGAGAGCGTTTCTTAAA +
Preference number: 4 (lower is better)
Translates to: GDPTGHRATWQVTSQSFHSGSEI*PRAFLK
Trigger: TTTAAGAAACGCTCTCGGCCAGATCTCCGAACCAGA...GTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp CTTGGTGGAGAATGCAACCTTCTTGCTTCAGTTTCAAGTCCCTCTGGGAGTCAGTTGTCTGGCTCAGCCTaGATCCGAGAAGCCACAGAC +
Preference number: 4 (lower is better)
Translates to: LGGECNLLASVSSPSGSQLSGSA*IREATD
Trigger: GTCTGTGGCTTCTCGGATCCAGGCTGAGCCAGACAA...CTGACTCCCAGAGGGACTTGAAACTGAAGCAAGAAGGTTGCATTCTCCACCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCCAATCCTCTTCTGATCCTTaGGTTCCTGATCCACAGTTT +
Preference number: 4 (lower is better)
Translates to: AQWVIPRKPLQQDQKGRQSSSDP*VPDPQF
Trigger: AAACTGTGGATCAGGAACCCAAGGATCAGAAGAGGA...TTGGCGACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp TCAATCATTTCACCCTCACGTCGAGCAGCACAGCACTCAGTGGCTCTGACAACATCAGCTACTGAGGTTTaGGAGGACAGTAGGGGCAAG +
Preference number: 4 (lower is better)
Translates to: SIISPSRRAAQHSVALTTSATEV*EDSRGK
Trigger: CTTGCCCCTACTGTCCTCCCAAACCTCAGTAGCTGA...TGTTGTCAGAGCCACTGAGTGCTGTGCTGCTCGACGTGAGGGTGAAATGATTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GAGAATGCAACCTTCTTGCTTCAGTTTCAAGTCCCTCTGGGAGTCAGGCAGTCCTGTCTGCAGGAACGGTaGGTCCTTGCTCCTCATCAT +
Preference number: 4 (lower is better)
Translates to: ENATFLLQFQVPLGVRQSCLQER*VLAPHH
Trigger: ATGATGAGGAGCAAGGACCCACCGTTCCTGCAGACA...GGACTGCCTGACTCCCAGAGGGACTTGAAACTGAAGCAAGAAGGTTGCATTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GGGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCCATCATTCGATGGGATaGGTATCCAATGCAAAGAAC +
Preference number: 4 (lower is better)
Translates to: GQPNGLYPGNPSSKTRRVHHSMG*VSNAKN
Trigger: GTTCTTTGCATTGGATACCCATCCCATCGAATGATG...GACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCCAACTCTGGATTCTGGTTTaGGCTGTTTCACTACCTCAT +
Preference number: 4 (lower is better)
Translates to: AQWVIPRKPLQQDQKGRQLWILV*AVSLPH
Trigger: ATGAGGTAGTGAAACAGCCCAAACCAGAATCCAGAG...TTGGCGACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CCAGCAGAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGTGTTCTCTGGATTCTaGTTTGGGCTGTTTCACTAC +
Preference number: 4 (lower is better)
Translates to: PAEGRRGLDMFGPLFPVFVFSGF*FGLFHY
Trigger: GTAGTGAAACAGCCCAAACCAGAATCCAGAGAACAC...AAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTCTGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTCAGATTGGTTCCAATTaGGTTTCTCATCCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: VSRCTSPLVGNARSYFNPQIGSN*VSHPCP
Trigger: TGGACAAGGATGAGAAACCCAATTGGAACCAATCTG...AGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp AGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTAAACGAATCTGGGATCTTTTaGCGGACCGCACATACTCGA +
Preference number: 4 (lower is better)
Translates to: REEEDWTCLGPCSRSLVNESGIF*RTAHTR
Trigger: TCGAGTATGTGCGGTCCGCCAAAAGATCCCAGATTC...GTTTACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp ATGTCAAAAGTACGTCAAAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGGACATGCTGTCATCGTaGGCTGGTGGAAGAACCTTC +
Preference number: 4 (lower is better)
Translates to: MSKVRQKEPHSPRRAWSQDMLSS*AGGRTF
Trigger: GAAGGTTCTTCCACCAGCCCACGATGACAGCATGTC...CTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTTTGACGTACTTTTGACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACAAGCGAGCCATGGCTCTaGTCTTTTGTAAGTGGTACT +
Preference number: 4 (lower is better)
Translates to: GQPGRSQVNHFTLTSSSTSEPWL*SFVSGT
Trigger: AGTACCACTTACAAAAGACCAGAGCCATGGCTCGCT...TGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GGCTGCCCAGGGAACTCACCCATGAATCCAGAAGCACTTAACACTGGTGGTGGTATGCGTAGCGAGCCATaGCTCTGGTCTTTTGTAAGT +
Preference number: 4 (lower is better)
Translates to: GCPGNSPMNPEALNTGGGMRSEP*LWSFVS
Trigger: ACTTACAAAAGACCAGAGCCATGGCTCGCTACGCAT...ACCACCACCAGTGTTAAGTGCTTCTGGATTCATGGGTGAGTTCCCTGGGCAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GGCTGCCCAGGGAACTCACCCATGAATCCAGAAGCACTTAACACTGGTGGTGGTAAGCCCTTAAAGAACTaGGGCTGCTTCCATCAACCA +
Preference number: 4 (lower is better)
Translates to: GCPGNSPMNPEALNTGGGKPLKN*GCFHQP
Trigger: TGGTTGATGGAAGCAGCCCCAGTTCTTTAAGGGCTT...ACCACCACCAGTGTTAAGTGCTTCTGGATTCATGGGTGAGTTCCCTGGGCAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCCAATGTTTCACAGCTATCTaGCAGAAGAGGCTCCTTCAA +
Preference number: 4 (lower is better)
Translates to: AQWVIPRKPLQQDQKGRQCFTAI*QKRLLQ
Trigger: TTGAAGGAGCCTCTTCTGCCAGATAGCTGTGAAACA...TTGGCGACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GAGATGCCCACTCCCATAGGGTCCAAAGTGACAGGGAGGATGTCAAGCAGAGGAGGATTTGTCACTGGATaGAGGGAGTCAAAACTTGGG +
Preference number: 4 (lower is better)
Translates to: EMPTPIGSKVTGRMSSRGGFVTG*RESKLG
Trigger: CCCAAGTTTTGACTCCCTCCATCCAGTGACAAATCC...TCCTCTGCTTGACATCCTCCCTGTCACTTTGGACCCTATGGGAGTGGGCATCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTAATGGGATTTGTCACTaGATGGAGGGAGTCAAAACT +
Preference number: 4 (lower is better)
Translates to: VSRCTSPLVGNARSYFNPNGICH*MEGVKT
Trigger: AGTTTTGACTCCCTCCATCCAGTGACAAATCCCATT...AGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GTGACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCTGCGGTAGTAAGATCTCCTaGGCTCTTTCCTGGAGCAGC +
Preference number: 4 (lower is better)
Translates to: VTEGFSSVNFGGRQECSCGSKIS*ALSWSS
Trigger: GCTGCTCCAGGAAAGAGCCCAGGAGATCTTACTACC...GCAGGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp TGTAGGAGGAGAGATGTGAAAAGCAAGATGCGTTTGCTCGGTGGCATGTGGGCACATGGAGTTTGTGCTTaGTCCCAACTTCCCACTGGG +
Preference number: 4 (lower is better)
Translates to: CRRRDVKSKMRLLGGMWAHGVCA*SQLPTG
Trigger: CCCAGTGGGAAGTTGGGACCAAGCACAAACTCCATG...TGCCCACATGCCACCGAGCAAACGCATCTTGCTTTTCACATCTCTCCTCCTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GTGACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCTGCCATGGAGTTTGTGCTTaGTCCCAACTTCCCACTGGG +
Preference number: 4 (lower is better)
Translates to: VTEGFSSVNFGGRQECSCHGVCA*SQLPTG
Trigger: CCCAGTGGGAAGTTGGGACCAAGCACAAACTCCATG...GCAGGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp ACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCTGCCTAAGCCCAGTCTTCCCTTaGAGTCTGTACCCCACCAGA +
Preference number: 4 (lower is better)
Translates to: TEGFSSVNFGGRQECSCLSPVFP*SLYPTR
Trigger: TCTGGTGGGGTACAGACTCCAAGGGAAGACTGGGCT...TAGGCAGGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GAGAGGCAGGAGCAGGCATGGCTTTGTTTCTTCCCAAACCTGCCTGATGTCAAAGCCAACAAAGGCATGTaGCTTTGGAGCCCAGTCTTC +
Preference number: 4 (lower is better)
Translates to: ERQEQAWLCFFPNLPDVKANKGM*LWSPVF
Trigger: GAAGACTGGGCTCCAAAGCCACATGCCTTTGTTGGC...TTTGACATCAGGCAGGTTTGGGAAGAAACAAAGCCATGCCTGCTCCTGCCTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CCAGCAGAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTCTGGTGGAACTCAGTTaGAGTTTAGAAAGCTTCCCA +
Preference number: 4 (lower is better)
Translates to: PAEGRRGLDMFGPLFPVFLVELS*SLESFP
Trigger: TGGGAAGCTTTCTAAACTCCAACTGAGTTCCACCAG...AAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTCTGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CCAGCAGAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGGGTAGTGGAAGACTaGCATTTCTACTTAGTTCAG +
Preference number: 4 (lower is better)
Translates to: PAEGRRGLDMFGPLFPVFGVVED*HFYLVQ
Trigger: CTGAACTAAGTAGAAATGCCAGTCTTCCACTACCCC...AAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTCTGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GCCTTGGGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGGTAGTGGAAGACTaGCATTTCTACTTAGTTCAG +
Preference number: 4 (lower is better)
Translates to: ALGSPMGYTQETPPARPEGVVED*HFYLVQ
Trigger: CTGAACTAAGTAGAAATGCCAGTCTTCCACTACCCC...TTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCCCAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGTGCCACAAGGTCTACAGATaGCATTTTCATAGGAAAGAC +
Preference number: 4 (lower is better)
Translates to: AGAPAPWWAMPGVTLTLCHKVYR*HFHRKD
Trigger: GTCTTTCCTATGAAAATGCCATCTGTAGACCTTGTG...GCACAGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp AGATCAGTGTCAAACTGTACCCTTGAGTGTCCCCAAAGGTTCCAGCAGAGGGAAGGGCATCGGGCAACCTaGCAGGTCACAAGTCAATCA +
Preference number: 4 (lower is better)
Translates to: RSVSNCTLECPQRFQQREGHRAT*QVTSQS
Trigger: TGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCC...TTCCCTCTGCTGGAACCTTTGGGGACACTCAAGGGTACAGTTTGACACTGATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR TCA 90 bp CAGAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTAGAAAGAGGTCGACTCTaGGATTCTGTAGAACAGGAT +
Preference number: 4 (lower is better)
Translates to: QREEEDWTCLGPCSRSLVERGRL*DSVEQD
Trigger: ATCCTGTTCTACAGAATCTCAGAGTCGACCTCTTTC...TACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR TCA 90 bp CCGGTCTTTGGTAAACAGACGCTTAAGTTGACAACTTGGACTTGGCCAATACTGCTGTTGCGCTTCATTTaGCCTGTGGCTGGCTTCCGG +
Preference number: 4 (lower is better)
Translates to: PVFGKQTLKLTTWTWPILLLRFI*PVAGFR
Trigger: CCGGAAGCCAGCCACAGGTCAAATGAAGCGCAACAG...CAGTATTGGCCAAGTCCAAGTTGTCAACTTAAGCGTCTGTTTACCAAAGACCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000651418.1
CDS-3UTR TCA 90 bp AACAAGGCAAGGGAAAACACACACAGGGGCATCTACTTGCTGGAAACATGTTGGCACGGAGGTTGGTGTTaGCAAGAATGGACCCAGGTG +
Preference number: 4 (lower is better)
Translates to: NKARENTHRGIYLLETCWHGGWC*QEWTQV
Trigger: CACCTGGGTCCATTCTTGTCAACACCAACCTCCGTG...CCAACATGTTTCCAGCAAGTAGATGCCCCTGTGTGTGTTTTCCCTTGCCTTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR TCA 90 bp GGGGGTAGTGGAAGACTGGCATTTCTACTTAGTTCAGGTAGGTTAACTCCCTTGCACGGAGGTTGGTGTTaGCAAGAATGGACCCAGGTG +
Preference number: 4 (lower is better)
Translates to: GGSGRLAFLLSSGRLTPLHGGWC*QEWTQV
Trigger: CACCTGGGTCCATTCTTGTCAACACCAACCTCCGTG...CAAGGGAGTTAACCTACCTGAACTAAGTAGAAATGCCAGTCTTCCACTACCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp GGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCTGACTTGCATCTCATaGGTAAATTCACCATCAGCC +
Preference number: 4 (lower is better)
Translates to: GDPTGHRATWQVTSQSFHLTCIS*VNSPSA
Trigger: GGCTGATGGTGAATTTACTCATGAGATGCAAGTCAG...GTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR TCA 90 bp CAGAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTACTGACTTGCATCTCATaGGTAAATTCACCATCAGCC +
Preference number: 4 (lower is better)
Translates to: QREEEDWTCLGPCSRSLVLTCIS*VNSPSA
Trigger: GGCTGATGGTGAATTTACTCATGAGATGCAAGTCAG...TACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR TCA 90 bp CAAGTGACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCCACACAAGCCACTTTTaGTTTCAGCCTCCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: QVTEGFSSVNFGGRQECSHTSHF*FQPPPG
Trigger: GCCAGGAGGAGGCTGAAATCAAAAGTGGCTTGTGTG...GGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGTCACTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp GTGACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCTGCGTAGAGGGGAACATCTaGGGCCACAGATTTTGCATC +
Preference number: 4 (lower is better)
Translates to: VTEGFSSVNFGGRQECSCVEGNI*GHRFCI
Trigger: GATGCAAAATCTGTGGCCTCAGATGTTCCCCTCTAC...GCAGGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp TCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGTGTGGCTTTTCGGTGTaGACACTTTCAATTGTGTTA +
Preference number: 4 (lower is better)
Translates to: SAGAPAPWWAMPGVTLTLCGFSV*TLSIVL
Trigger: TAACACAATTGAAAGTGTTCACACCGAAAAGCCACA...CAGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp CAAGGCAAGGGAAAACACACACAGGGGCATCTACTTGCTGGAAACATGTTGGGACAGGCAATCAGTCGGTaGGGATTCAGGTGTGGAACT +
Preference number: 4 (lower is better)
Translates to: QGKGKHTQGHLLAGNMLGQAISR*GFRCGT
Trigger: AGTTCCACACCTGAATCCTCACCGACTGATTGCCTG...TCCCAACATGTTTCCAGCAAGTAGATGCCCCTGTGTGTGTTTTCCCTTGCCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp TCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGCTTCAGAGTCTCCGTTaGTTTTCAGCTTTTCAATGT +
Preference number: 4 (lower is better)
Translates to: SAGAPAPWWAMPGVTLTLLQSLR*FSAFQC
Trigger: ACATTGAAAAGCTGAAAATCAACGGAGACTCTGAAG...CAGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp CTGGCATTTCTACTTAGTTCAGGTAGGTTAACTCCCTTGGTGGAGAATGCAACCTCCGTGGACTCACCGTaGGGACTCAGTGCTTCAGAG +
Preference number: 4 (lower is better)
Translates to: LAFLLSSGRLTPLVENATSVDSP*GLSASE
Trigger: CTCTGAAGCACTGAGTCCTCACGGTGAGTCCACGGA...GGTTGCATTCTCCACCAAGGGAGTTAACCTACCTGAACTAAGTAGAAATGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp CTTGGTGGAGAATGCAACCTTCTTGCTTCAGTTTCAAGTCCCTCTGGGAGTCAGTACTTGTGGGGATTCTaGCATGCTGTCATCGTGGGC +
Preference number: 4 (lower is better)
Translates to: LGGECNLLASVSSPSGSQYLWGF*HAVIVG
Trigger: GCCCACGATGACAGCATGTCAGAATCCCCACAAGTA...CTGACTCCCAGAGGGACTTGAAACTGAAGCAAGAAGGTTGCATTCTCCACCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp GGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACGCACGGACTTCCTTCTaGTCTTCACAACTAAAGGAA +
Preference number: 4 (lower is better)
Translates to: GDPTGHRATWQVTSQSFHARTSF*SSQLKE
Trigger: TTCCTTTAGTTGTGAAGATCAGAAGGAAGTCCGTGC...GTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp AGTGGAAGACTGGCATTTCTACTTAGTTCAGGTAGGTTAACTCCCTTGGTGGAGCCTGTAACATTGCTCTaGTCACCCAGGGCCCGACCT +
Preference number: 4 (lower is better)
Translates to: SGRLAFLLSSGRLTPLVEPVTLL*SPRARP
Trigger: AGGTCGGGCCCTGGGTGATCAGAGCAATGTTACAGG...CTCCACCAAGGGAGTTAACCTACCTGAACTAAGTAGAAATGCCAGTCTTCCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp CTTCCTGGGGGCTGCCCAGGGAACTCACCCATGAATCCAGAAGCACTTAACACTAAGTCTTCTCATTCTTaGCGCTGCCAACAAAGGCAT +
Preference number: 4 (lower is better)
Translates to: LPGGCPGNSPMNPEALNTKSSHS*RCQQRH
Trigger: ATGCCTTTGTTGGCAGCGTCAAGAATGAGAAGACTT...AGTGTTAAGTGCTTCTGGATTCATGGGTGAGTTCCCTGGGCAGCCCCCAGGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp GAGATGCCCACTCCCATAGGGTCCAAAGTGACAGGGAGGATGTCAAGCAGAGGACAATACACAGAGCTTTaGGGGTCCAATACAGTCATC +
Preference number: 4 (lower is better)
Translates to: EMPTPIGSKVTGRMSSRGQYTEL*GSNTVI
Trigger: GATGACTGTATTGGACCCTCAAAGCTCTGTGTATTG...TCCTCTGCTTGACATCCTCCCTGTCACTTTGGACCCTATGGGAGTGGGCATCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp CCAGCAGAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTATTCAAGGTTCCAAATaGTCCTGTGGGTTAGTGGAT +
Preference number: 4 (lower is better)
Translates to: PAEGRRGLDMFGPLFPVFIQGSK*SCGLVD
Trigger: ATCCACTAACCCACAGGATCATTTGGAACCTTGAAT...AAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTCTGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp GTCAAAAGTACGTCAAAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGGTAAACATCTGGACGGCTaGCTCACAAGGTCTACAGAT +
Preference number: 4 (lower is better)
Translates to: VKSTSKGASQSQESMVPGKHLDG*LTRSTD
Trigger: ATCTGTAGACCTTGTGAGTCAGCCGTCCAGATGTTT...ACCTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTTTGACGTACTTTTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp CTTTCACATACACAGGTGCGTGGAGATGCCCACTCCCATAGGGTCCAAAGTGACGTAGGAGGAGAGATGTaGAAAGCAAGATGCGTTTGC +
Preference number: 4 (lower is better)
Translates to: LSHTQVRGDAHSHRVQSDVGGEM*KARCVC
Trigger: GCAAACGCATCTTGCTTTTCACATCTCTCCTCCTAC...GTCACTTTGGACCCTATGGGAGTGGGCATCTCCACGCACCTGTGTATGTGAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp GGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACAGCACTCAGTGTAGGAGGAGAGATGTaGAAAGCAAGATGCGTTTGC +
Preference number: 4 (lower is better)
Translates to: GRSQVNHFTLTSSSTALSVGGEM*KARCVC
Trigger: GCAAACGCATCTTGCTTTTCACATCTCTCCTCCTAC...ACTGAGTGCTGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp CAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACAGCAGTAGGAGGAGAGATGTaGAAAGCAAGATGCGTTTGC +
Preference number: 4 (lower is better)
Translates to: QPGRSQVNHFTLTSSSTAVGGEM*KARCVC
Trigger: GCAAACGCATCTTGCTTTTCACATCTCTCCTCCTAC...TGCTGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR TCA 90 bp AGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTAAACCAGGGAACTCACCCATaGATCCAGAAGCACTTAACA +
Preference number: 4 (lower is better)
Translates to: REEEDWTCLGPCSRSLVNQGTHP*IQKHLT
Trigger: TGTTAAGTGCTTCTGGATTCATGGGTGAGTTCCCTG...GTTTACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR TCA 90 bp CTGGCATTTCTACTTAGTTCAGGTAGGTTAACTCCCTTGGTGGAGAATGCAACCTCCCAGGTATTGCTGTaGCAGGTGGTGACCCTGGAG +
Preference number: 4 (lower is better)
Translates to: LAFLLSSGRLTPLVENATSQVLL*QVVTLE
Trigger: CTCCAGGGTCACCACCTGTCACAGCAATACCTGGGA...GGTTGCATTCTCCACCAAGGGAGTTAACCTACCTGAACTAAGTAGAAATGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp CTTCCTGGGGGCTGCCCAGGGAACTCACCCATGAATCCAGAAGCACTTAACACTCACTCATGCTTCAGATaGCGAAAATGCCACATCAGA +
Preference number: 4 (lower is better)
Translates to: LPGGCPGNSPMNPEALNTHSCFR*RKCHIR
Trigger: TCTGATGTGGCATTTTCGTCATCTGAAGCATGAGTG...AGTGTTAAGTGCTTCTGGATTCATGGGTGAGTTCCCTGGGCAGCCCCCAGGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR TCA 90 bp CAGAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTAAACAGACGCTTAAGTTaGCAACTTGGACTTGGCCAA +
Preference number: 4 (lower is better)
Translates to: QREEEDWTCLGPCSRSLVNRRLS*QLGLGQ
Trigger: TTGGCCAAGTCCAAGTTGTCAACTTAAGCGTCTGTT...TACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR TCA 90 bp GAGCACAACGAATATCAGAGAAGTGATGCCTATGGATGTAAAAGGCCAATGAACGCTTTCCCGCTCTGCTaGGGGACTGAGACAGGACCG +
Preference number: 4 (lower is better)
Translates to: EHNEYQRSDAYGCKRPMNAFPLC*GTETGP
Trigger: CGGTCCTGTCTCAGTCCCTCAGCAGAGCGGGAAAGC...GTTCATTGGCCTTTTACATCCATAGGCATCACTTCTCTGATATTCGTTGTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542461.5
ENST00000646367.1
CDS-3UTR TCA 90 bp TGTAATCCATCCCAGTGCTTTGTGAAGCTGTGGTGGGAAGATCACTTGAGGCCATTCCAGTCCAGCTTCTaGAGGCAAACAGCCCAGTCT +
Preference number: 4 (lower is better)
Translates to: CNPSQCFVKLWWEDHLRPFQSSF*RQTAQS
Trigger: AGACTGGGCTGTTTGCCTTCAGAAGCTGGACTGGAA...TGGCCTCAAGTGATCTTCCCACCACAGCTTCACAAAGCACTGGGATGGATTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649901.1
CDS-3UTR TCA 90 bp CACATCTCAGACACAAGCTGTAGACTAACAGACCACTCCCAAGCTTACAGCAGGACAACCCCCATCGGTTaGACGAGACGGCTTCAAACA +
Preference number: 4 (lower is better)
Translates to: HISDTSCRLTDHSQAYSRTTPIG*TRRLQT
Trigger: TGTTTGAAGCCGTCTCGTTCAACCGATGGGGGTTGT...CCTGCTGTAAGCTTGGGAGTGGTCTGTTAGTCTACAGCTTGTGTCTGAGATGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375689.5
CDS-3UTR TCA 90 bp ACCTGTAATCCATCCCAGTGCTTTGTGAAGCTGTGGTGGGAAGATCACTTGAGGACAACCCCCATCGGTTaGACGAGACGGCTTCAAACA +
Preference number: 4 (lower is better)
Translates to: TCNPSQCFVKLWWEDHLRTTPIG*TRRLQT
Trigger: TGTTTGAAGCCGTCTCGTTCAACCGATGGGGGTTGT...CCTCAAGTGATCTTCCCACCACAGCTTCACAAAGCACTGGGATGGATTACAGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649901.1
CDS-3UTR TCA 90 bp TGTAATCCATCCCAGTGCTTTGTGAAGCTGTGGTGGGAAGATCACTTGAGGCCACATCCCAGTGCTTTGTaGAGCTGTGGTGGGAAGATC +
Preference number: 4 (lower is better)
Translates to: CNPSQCFVKLWWEDHLRPHPSAL*SCGGKI
Trigger: GATCTTCCCACCACAGCTTCACAAAGCACTGGGATG...TGGCCTCAAGTGATCTTCCCACCACAGCTTCACAAAGCACTGGGATGGATTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000555343.2
ENST00000642676.1
ENST00000644587.1
ENST00000645035.1
ENST00000645337.1
ENST00000649901.1
CDS-3UTR TCA 90 bp ACCTGTAATCCATCCCAGTGCTTTGTGAAGCTGTGGTGGGAAGATCACTTGAGGCATCCCAGTGCTTTGTaGAGCTGTGGTGGGAAGATC +
Preference number: 4 (lower is better)
Translates to: TCNPSQCFVKLWWEDHLRHPSAL*SCGGKI
Trigger: GATCTTCCCACCACAGCTTCACAAAGCACTGGGATG...CCTCAAGTGATCTTCCCACCACAGCTTCACAAAGCACTGGGATGGATTACAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000555343.2
ENST00000642676.1
ENST00000645035.1
ENST00000645337.1
ENST00000649901.1
CDS-3UTR GCA 90 bp GCAAGAACCCTCAACTCTGTAATAAGTCGAAATACAAGATATAAGGCAGGAAACTGCTGCTGGACGGGCTaGCGCTCTCGCCATCGGCGT +
Preference number: 4 (lower is better)
Translates to: ARTLNSVISRNTRYKAGNCCWTG*RSRHRR
Trigger: ACGCCGATGGCGAGAGCGGCAGCCCGTCCAGCAGCA...GTTTCCTGCCTTATATCTTGTATTTCGACTTATTACAGAGTTGAGGGTTCTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000651418.1
CDS-3UTR GCA 90 bp TCAATCATTTCACCCTCACGTCGAGCAGCACAGCACTCAGTGGCTCTGACAACATCCTGGCCCACGTTCTaGTGCAATGACTCTTCTTTG +
Preference number: 4 (lower is better)
Translates to: SIISPSRRAAQHSVALTTSWPTF*CNDSSL
Trigger: CAAAGAAGAGTCATTGCAGCAGAACGTGGGCCAGGA...TGTTGTCAGAGCCACTGAGTGCTGTGCTGCTCGACGTGAGGGTGAAATGATTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GAGAATGCAACCTTCTTGCTTCAGTTTCAAGTCCCTCTGGGAGTCAGGCAGTCCTCCTGGCCCACGTTCTaGTGCAATGACTCTTCTTTG +
Preference number: 4 (lower is better)
Translates to: ENATFLLQFQVPLGVRQSSWPTF*CNDSSL
Trigger: CAAAGAAGAGTCATTGCAGCAGAACGTGGGCCAGGA...GGACTGCCTGACTCCCAGAGGGACTTGAAACTGAAGCAAGAAGGTTGCATTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp CATGGCTTTGTTTCTTCCCAAACCTGCCTGATGTCAAAAGTACGTCAAAAGGAGGGGACTGCTCAGCCCTaGTGGGTCAGTCTTAGCCTC +
Preference number: 4 (lower is better)
Translates to: HGFVSSQTCLMSKVRQKEGTAQP*WVSLSL
Trigger: GAGGCTAAGACTGACCCAGCAGGGCTGAGCAGTCCC...CTCCTTTTGACGTACTTTTGACATCAGGCAGGTTTGGGAAGAAACAAAGCCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR GCA 90 bp GGGGGTAGTGGAAGACTGGCATTTCTACTTAGTTCAGGTAGGTTAACTCCCTTGAGATGCAGAGGCACGTaGCAAGTTGTCTGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: GGSGRLAFLLSSGRLTPLRCRGT*QVVWLS
Trigger: GCTGAGCCAGACAACTTGGCACGTGCCTCTGCATCT...CAAGGGAGTTAACCTACCTGAACTAAGTAGAAATGCCAGTCTTCCACTACCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp CTGGCATTTCTACTTAGTTCAGGTAGGTTAACTCCCTTGGTGGAGAATGCAACCACGGGCTTTAATGTCTaGGAGGGTCCTGGCGCCAGT +
Preference number: 4 (lower is better)
Translates to: LAFLLSSGRLTPLVENATTGFNV*EGPGAS
Trigger: ACTGGCGCCAGGACCCTCGCAGACATTAAAGCCCGT...GGTTGCATTCTCCACCAAGGGAGTTAACCTACCTGAACTAAGTAGAAATGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GCCGGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTGGGATGGGTATCCAATaGAAAGAACTGTTAGAAACG +
Preference number: 4 (lower is better)
Translates to: AGDPTGHRATWQVTSQSFGMGIQ*KELLET
Trigger: CGTTTCTAACAGTTCTTTGCATTGGATACCCATCCC...AAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACCGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCCAAAAGCTTCCCATAAAATaGCTGCTTGATGCTGAGTTG +
Preference number: 4 (lower is better)
Translates to: AQWVIPRKPLQQDQKGRQKLPIK*LLDAEL
Trigger: CAACTCAGCATCAAGCAGGCATTTTATGGGAAGCTT...TTGGCGACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp ATGTCAAAAGTACGTCAAAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGGGGGGAAGGCAAGAGTaGTCCTGCCTAAAGAGTATT +
Preference number: 4 (lower is better)
Translates to: MSKVRQKEPHSPRRAWSQGGRQE*SCLKSI
Trigger: AATACTCTTTAGGCAGGAGCACTCTTGCCTTCCCCC...CTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTTTGACGTACTTTTGACAT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp AGTGGAAGACTGGCATTTCTACTTAGTTCAGGTAGGTTAACTCCCTTGGTGGAGCGCAACCCCACTCCGTaGCACATCAGGCTCTGTCTT +
Preference number: 4 (lower is better)
Translates to: SGRLAFLLSSGRLTPLVERNPTP*HIRLCL
Trigger: AAGACAGAGCCTGATGTGGCACGGAGTGGGGTTGCG...CTCCACCAAGGGAGTTAACCTACCTGAACTAAGTAGAAATGCCAGTCTTCCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GAGATGCCCACTCCCATAGGGTCCAAAGTGACAGGGAGGATGTCAAGCAGAGGATCCCTTGGTGGAGAATaGAACCTTCTTGCTTCAGTT +
Preference number: 4 (lower is better)
Translates to: EMPTPIGSKVTGRMSSRGSLGGE*NLLASV
Trigger: AACTGAAGCAAGAAGGTTGCATTCTCCACCAAGGGA...TCCTCTGCTTGACATCCTCCCTGTCACTTTGGACCCTATGGGAGTGGGCATCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp CTTTCACATACACAGGTGCGTGGAGATGCCCACTCCCATAGGGTCCAAAGTGACGTTACTTTAACCCTGTaGTGGCTTCTTTCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: LSHTQVRGDAHSHRVQSDVTLTL*WLLSWP
Trigger: TGGCCAGGAAAGAAGCCAGCACAGGGTTAAAGTAAC...GTCACTTTGGACCCTATGGGAGTGGGCATCTCCACGCACCTGTGTATGTGAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp CTTCCTGGGGGCTGCCCAGGGAACTCACCCATGAATCCAGAAGCACTTAACACTAACCAAGGTCAAACTTaGTCCGTCAACTGGCAAATG +
Preference number: 4 (lower is better)
Translates to: LPGGCPGNSPMNPEALNTNQGQT*SVNWQM
Trigger: CATTTGCCAGTTGACGGAGCAAGTTTGACCTTGGTT...AGTGTTAAGTGCTTCTGGATTCATGGGTGAGTTCCCTGGGCAGCCCCCAGGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp ACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCTGCCTAAAAGCAAGATGCGTTTaGTCGGTGGCATGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: TEGFSSVNFGGRQECSCLKARCV*SVACGQ
Trigger: CTGCCCACATGCCACCGAGCAAACGCATCTTGCTTT...TAGGCAGGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GCCGGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTGGACTTGGCCAATACTaGATTCTAAATCACCACATC +
Preference number: 4 (lower is better)
Translates to: AGDPTGHRATWQVTSQSFGLGQY*ILNHHI
Trigger: GATGTGGTGATTTAGAATGCAGTATTGGCCAAGTCC...AAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACCGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR GCA 90 bp CAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGGGACTTGGCCAATACTaGATTCTAAATCACCACATC +
Preference number: 4 (lower is better)
Translates to: QGIGQPGRSQVNHFTLTSGLGQY*ILNHHI
Trigger: GATGTGGTGATTTAGAATGCAGTATTGGCCAAGTCC...CGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp AAGAGATACATCGTTTTCACCACTCACAGTGCTGGCTTCATTAGACCCACAGCTTCCACTGTAGCTGGATaGCGAGACCACTGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: KRYIVFTTHSAGFIRPTASTVAG*RDHCRA
Trigger: TGCCCTGCAGTGGTCTCGCCATCCAGCTACAGTGGA...AGCTGTGGGTCTAATGAAGCCAGCACTGTGAGTGGTGAAAACGATGTATCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644587.1
CDS-3UTR CCA 90 bp CCGGTCTTTGGTAAACAGACGCTTAAGTTGACAACTTGGACTTGGCCAATACTGTCCACTGTAGCTGGATaGCGAGACCACTGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: PVFGKQTLKLTTWTWPILSTVAG*RDHCRA
Trigger: TGCCCTGCAGTGGTCTCGCCATCCAGCTACAGTGGA...CAGTATTGGCCAAGTCCAAGTTGTCAACTTAAGCGTCTGTTTACCAAAGACCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp AGATCAGTGTCAAACTGTACCCTTGAGTGTCCCCAAAGGTTCCAGCAGAGGGAAGATGCAGATTCCACGTaGGCCCCGTTTACCTTCAGA +
Preference number: 4 (lower is better)
Translates to: RSVSNCTLECPQRFQQREDADST*APFTFR
Trigger: TCTGAAGGTAAACGGGGCCCACGTGGAATCTGCATC...TTCCCTCTGCTGGAACCTTTGGGGACACTCAAGGGTACAGTTTGACACTGATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp GACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTGCAATGACTCTTCTTTaGTCAAACCCAGCTTCTGTC +
Preference number: 4 (lower is better)
Translates to: DPTGHRATWQVTSQSFHPAMTLL*SNPASV
Trigger: GACAGAAGCTGGGTTTGACCAAAGAAGAGTCATTGC...AGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp AGATCAGTGTCAAACTGTACCCTTGAGTGTCCCCAAAGGTTCCAGCAGAGGGAAATTTCAGCCTCCTCCTaGCCCACGTTCTGCTGCAAT +
Preference number: 4 (lower is better)
Translates to: RSVSNCTLECPQRFQQREISASS*PTFCCN
Trigger: ATTGCAGCAGAACGTGGGCCAGGAGGAGGCTGAAAT...TTCCCTCTGCTGGAACCTTTGGGGACACTCAAGGGTACAGTTTGACACTGATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp CTGGCATTTCTACTTAGTTCAGGTAGGTTAACTCCCTTGGTGGAGAATGCAACCCATCTCGCTGTCGGGTaGCTGGACCACGCTGTATAC +
Preference number: 4 (lower is better)
Translates to: LAFLLSSGRLTPLVENATHLAVG*LDHAVY
Trigger: GTATACAGCGTGGTCCAGCCACCCGACAGCGAGATG...GGTTGCATTCTCCACCAAGGGAGTTAACCTACCTGAACTAAGTAGAAATGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp AACAAGGCAAGGGAAAACACACACAGGGGCATCTACTTGCTGGAAACATGTTGGGATTCCTTCTGGCTCTaGTTCGGAGATCTGGCCGAG +
Preference number: 4 (lower is better)
Translates to: NKARENTHRGIYLLETCWDSFWL*FGDLAE
Trigger: CTCGGCCAGATCTCCGAACCAGAGCCAGAAGGAATC...CCAACATGTTTCCAGCAAGTAGATGCCCCTGTGTGTGTTTTCCCTTGCCTTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp AGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTAAACTGTACAGATTCCTTCTaGCTCTGGTTCGGAGATCTG +
Preference number: 4 (lower is better)
Translates to: REEEDWTCLGPCSRSLVNCTDSF*LWFGDL
Trigger: CAGATCTCCGAACCAGAGCCAGAAGGAATCTGTACA...GTTTACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp GTCAAAAGTACGTCAAAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGGTTGTACAGATTCCTTCTaGCTCTGGTTCGGAGATCTG +
Preference number: 4 (lower is better)
Translates to: VKSTSKGASQSQESMVPGCTDSF*LWFGDL
Trigger: CAGATCTCCGAACCAGAGCCAGAAGGAATCTGTACA...ACCTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTTTGACGTACTTTTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp CTTTCACATACACAGGTGCGTGGAGATGCCCACTCCCATAGGGTCCAAAGTGACTGTACAGATTCCTTCTaGCTCTGGTTCGGAGATCTG +
Preference number: 4 (lower is better)
Translates to: LSHTQVRGDAHSHRVQSDCTDSF*LWFGDL
Trigger: CAGATCTCCGAACCAGAGCCAGAAGGAATCTGTACA...GTCACTTTGGACCCTATGGGAGTGGGCATCTCCACGCACCTGTGTATGTGAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp AGATCAGTGTCAAACTGTACCCTTGAGTGTCCCCAAAGGTTCCAGCAGAGGGAAAAAGTTGAATCCGGATaGGCGGGACTTTGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: RSVSNCTLECPQRFQQREKVESG*AGLWAP
Trigger: AGGAGCCCAAAGTCCCGCCCATCCGGATTCAACTTT...TTCCCTCTGCTGGAACCTTTGGGGACACTCAAGGGTACAGTTTGACACTGATCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp CATGGCTTTGTTTCTTCCCAAACCTGCCTGATGTCAAAAGTACGTCAAAAGGAGCTCCGATGGCAGTGGTaGCCGCCTCTCTATGGCAGT +
Preference number: 4 (lower is better)
Translates to: HGFVSSQTCLMSKVRQKELRWQW*PPLYGS
Trigger: ACTGCCATAGAGAGGCGGCCACCACTGCCATCGGAG...CTCCTTTTGACGTACTTTTGACATCAGGCAGGTTTGGGAAGAAACAAAGCCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CAAGGCAAGGGAAAACACACACAGGGGCATCTACTTGCTGGAAACATGTTGGGAATGGCAGTTCCGGCCTaGGTATGCTCCCCATTTAGA +
Preference number: 4 (lower is better)
Translates to: QGKGKHTQGHLLAGNMLGMAVPA*VCSPFR
Trigger: TCTAAATGGGGAGCATACCCAGGCCGGAACTGCCAT...TCCCAACATGTTTCCAGCAAGTAGATGCCCCTGTGTGTGTTTTCCCTTGCCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CAGACGCTTAAGTTGACAACTTGGACTTGGCCAATACTGCATTCTAAATCACCAAGTAGGGGCAAGGCCTaGCATGGCTGGTCCCCAGTG +
Preference number: 4 (lower is better)
Translates to: QTLKLTTWTWPILHSKSPSRGKA*HGWSPV
Trigger: CACTGGGGACCAGCCATGCCAGGCCTTGCCCCTACT...TGGTGATTTAGAATGCAGTATTGGCCAAGTCCAAGTTGTCAACTTAAGCGTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp ACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCTGCCTATCAGCTACTGAGGTTTaGGAGGACAGTAGGGGCAAG +
Preference number: 4 (lower is better)
Translates to: TEGFSSVNFGGRQECSCLSATEV*EDSRGK
Trigger: CTTGCCCCTACTGTCCTCCCAAACCTCAGTAGCTGA...TAGGCAGGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp TGTAGGAGGAGAGATGTGAAAAGCAAGATGCGTTTGCTCGGTGGCATGTGGGCACACTTTCCCAGGAAGTaGTGCCAGACTCACATTCAG +
Preference number: 4 (lower is better)
Translates to: CRRRDVKSKMRLLGGMWAHFPRK*CQTHIQ
Trigger: CTGAATGTGAGTCTGGCACCACTTCCTGGGAAAGTG...TGCCCACATGCCACCGAGCAAACGCATCTTGCTTTTCACATCTCTCCTCCTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp TCAATCATTTCACCCTCACGTCGAGCAGCACAGCACTCAGTGGCTCTGACAACACCACTAGAGACGGAATaGGACCATTGTCTGCAGGAA +
Preference number: 4 (lower is better)
Translates to: SIISPSRRAAQHSVALTTPLETE*DHCLQE
Trigger: TTCCTGCAGACAATGGTCCCATTCCGTCTCTAGTGG...TGTTGTCAGAGCCACTGAGTGCTGTGCTGCTCGACGTGAGGGTGAAATGATTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp AGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTAAACGTGAGGATTCAGGTGTaGAACTGGGGGTCACATTTA +
Preference number: 4 (lower is better)
Translates to: REEEDWTCLGPCSRSLVNVRIQV*NWGSHL
Trigger: TAAATGTGACCCCCAGTTCCACACCTGAATCCTCAC...GTTTACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGTACCTCATCATTCGATaGGATGGGTATCCAATGCAA +
Preference number: 4 (lower is better)
Translates to: QGIGQPGRSQVNHFTLTSYLIIR*DGYPMQ
Trigger: TTGCATTGGATACCCATCCCATCGAATGATGAGGTA...CGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CTTCCTGGGGGCTGCCCAGGGAACTCACCCATGAATCCAGAAGCACTTAACACTCTCTGGATTCTGGTTTaGGCTGTTTCACTACCTCAT +
Preference number: 4 (lower is better)
Translates to: LPGGCPGNSPMNPEALNTLWILV*AVSLPH
Trigger: ATGAGGTAGTGAAACAGCCCAAACCAGAATCCAGAG...AGTGTTAAGTGCTTCTGGATTCATGGGTGAGTTCCCTGGGCAGCCCCCAGGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACGTGTTCTCTGGATTCTaGTTTGGGCTGTTTCACTAC +
Preference number: 4 (lower is better)
Translates to: GDPTGHRATWQVTSQSFHVFSGF*FGLFHY
Trigger: GTAGTGAAACAGCCCAAACCAGAATCCAGAGAACAC...GTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GCCTTGGGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAATGGTATGTGTTCTCTaGATTCTGGTTTGGGCTGTT +
Preference number: 4 (lower is better)
Translates to: ALGSPMGYTQETPPARPEMVCVL*ILVWAV
Trigger: AACAGCCCAAACCAGAATCCAGAGAACACATACCAT...TTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCCCAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CTTTCACATACACAGGTGCGTGGAGATGCCCACTCCCATAGGGTCCAAAGTGACCTGGGGCTCAACAGATaGTATGTGTTCTCTGGATTC +
Preference number: 4 (lower is better)
Translates to: LSHTQVRGDAHSHRVQSDLGLNR*YVFSGF
Trigger: GAATCCAGAGAACACATACCATCTGTTGAGCCCCAG...GTCACTTTGGACCCTATGGGAGTGGGCATCTCCACGCACCTGTGTATGTGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp AAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGGTATTGCTGTGACAGGTATTCACCTTGGACAGTaGGGCAGATTGGTTCCAATT +
Preference number: 4 (lower is better)
Translates to: KGASQSQESMVPGIAVTGIHLGQ*GRLVPI
Trigger: AATTGGAACCAATCTGCCCCACTGTCCAAGGTGAAT...ACCTGTCACAGCAATACCTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CAGAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTAATTCACCTTGGACAGTaGGGCAGATTGGTTCCAATT +
Preference number: 4 (lower is better)
Translates to: QREEEDWTCLGPCSRSLVIHLGQ*GRLVPI
Trigger: AATTGGAACCAATCTGCCCCACTGTCCAAGGTGAAT...TACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp TGTAGGAGGAGAGATGTGAAAAGCAAGATGCGTTTGCTCGGTGGCATGTGGGCAGAATCTGGGATCTTTTaGCGGACCGCACATACTCGA +
Preference number: 4 (lower is better)
Translates to: CRRRDVKSKMRLLGGMWAESGIF*RTAHTR
Trigger: TCGAGTATGTGCGGTCCGCCAAAAGATCCCAGATTC...TGCCCACATGCCACCGAGCAAACGCATCTTGCTTTTCACATCTCTCCTCCTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTAAAAAGCCCTTAAAGAACTaGGGCTGCTTCCATCAACCA +
Preference number: 4 (lower is better)
Translates to: EGRRGLDMFGPLFPVFGKKPLKN*GCFHQP
Trigger: TGGTTGATGGAAGCAGCCCCAGTTCTTTAAGGGCTT...TTTACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACAGCACTCAGTGGATTTGTCACTGGATaGAGGGAGTCAAAACTTGGG +
Preference number: 4 (lower is better)
Translates to: GRSQVNHFTLTSSSTALSGFVTG*RESKLG
Trigger: CCCAAGTTTTGACTCCCTCCATCCAGTGACAAATCC...ACTGAGTGCTGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp AGATCAGTGTCAAACTGTACCCTTGAGTGTCCCCAAAGGTTCCAGCAGAGGGAAGGTAGTAAGATCTCCTaGGCTCTTTCCTGGAGCAGC +
Preference number: 4 (lower is better)
Translates to: RSVSNCTLECPQRFQQREGSKIS*ALSWSS
Trigger: GCTGCTCCAGGAAAGAGCCCAGGAGATCTTACTACC...TTCCCTCTGCTGGAACCTTTGGGGACACTCAAGGGTACAGTTTGACACTGATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CAAGTGACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCCATGGAGTTTGTGCTTaGTCCCAACTTCCCACTGGG +
Preference number: 4 (lower is better)
Translates to: QVTEGFSSVNFGGRQECSHGVCA*SQLPTG
Trigger: CCCAGTGGGAAGTTGGGACCAAGCACAAACTCCATG...GGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGTCACTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp AGATCAGTGTCAAACTGTACCCTTGAGTGTCCCCAAAGGTTCCAGCAGAGGGAAGTACCCCACCAGACATaGAGTTTGTGCTTGGTCCCA +
Preference number: 4 (lower is better)
Translates to: RSVSNCTLECPQRFQQREVPHQT*SLCLVP
Trigger: TGGGACCAAGCACAAACTCCATGTCTGGTGGGGTAC...TTCCCTCTGCTGGAACCTTTGGGGACACTCAAGGGTACAGTTTGACACTGATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp AAAAGTACGTCAAAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGGTATTTGCTTGATGCTGAGTTaGGAGGGGAGAGAAGAAGGC +
Preference number: 4 (lower is better)
Translates to: KSTSKGASQSQESMVPGICLMLS*EGREEG
Trigger: GCCTTCTTCTCTCCCCTCCCAACTCAGCATCAAGCA...AATACCTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTTTGACGTACTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp AAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGGTATTGCTGTGACAGGTCTGGTGGAACTCAGTTaGAGTTTAGAAAGCTTCCCA +
Preference number: 4 (lower is better)
Translates to: KGASQSQESMVPGIAVTGLVELS*SLESFP
Trigger: TGGGAAGCTTTCTAAACTCCAACTGAGTTCCACCAG...ACCTGTCACAGCAATACCTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACAGCAGAAAGTGATGCACTGTaGCTCGCACCAAAGTTTGCT +
Preference number: 4 (lower is better)
Translates to: QPGRSQVNHFTLTSSSTAESDAL*LAPKFA
Trigger: AGCAAACTTTGGTGCGAGCCACAGTGCATCACTTTC...TGCTGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GGGGGTAGTGGAAGACTGGCATTTCTACTTAGTTCAGGTAGGTTAACTCCCTTGCCTTGGGCAGCCCAATaGGTTATACCCAGGAAACCC +
Preference number: 4 (lower is better)
Translates to: GGSGRLAFLLSSGRLTPLPWAAQ*VIPRKP
Trigger: GGGTTTCCTGGGTATAACCCATTGGGCTGCCCAAGG...CAAGGGAGTTAACCTACCTGAACTAAGTAGAAATGCCAGTCTTCCACTACCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp ATGTCAAAAGTACGTCAAAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGTGCTGGCTTCTTTCCTaGCCATCAACTCCCCAAAGT +
Preference number: 4 (lower is better)
Translates to: MSKVRQKEPHSPRRAWSQCWLLS*PSTPQS
Trigger: ACTTTGGGGAGTTGATGGCCAGGAAAGAAGCCAGCA...CTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTTTGACGTACTTTTGACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp AGGTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCACAAGGTCTACAGATaGCATTTTCATAGGAAAGAC +
Preference number: 4 (lower is better)
Translates to: RSAGAPAPWWAMPGVTLTHKVYR*HFHRKD
Trigger: GTCTTTCCTATGAAAATGCCATCTGTAGACCTTGTG...GGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp AGGTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTTAAGTTGACAACTTaGACTTGGCCAATACTGCAT +
Preference number: 4 (lower is better)
Translates to: RSAGAPAPWWAMPGVTLTLKLTT*TWPILH
Trigger: ATGCAGTATTGGCCAAGTCCAAGTTGTCAACTTAAG...GGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp AGGAAGCTCTGTAGCTGTCCCTGGGATTGGAAAGAGGTCGACTCTGAGATTCTGGTCCTTCTGCCTCTATaGCCTGCAGAATCTGTTTTG +
Preference number: 4 (lower is better)
Translates to: RKLCSCPWDWKEVDSEILVLLPL*PAESVL
Trigger: CAAAACAGATTCTGCAGGTCATAGAGGCAGAAGGAC...CAGAATCTCAGAGTCGACCTCTTTCCAATCCCAGGGACAGCTACAGAGCTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644587.1
CDS-3UTR TCA 90 bp GTCAAAAGTACGTCAAAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGGTGAAAGAGGTCGACTCTaGGATTCTGTAGAACAGGAT +
Preference number: 4 (lower is better)
Translates to: VKSTSKGASQSQESMVPGERGRL*DSVEQD
Trigger: ATCCTGTTCTACAGAATCTCAGAGTCGACCTCTTTC...ACCTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTTTGACGTACTTTTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR TCA 90 bp ACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCTGCCTATTGTTTGTTCGCCTGTaGGGAAGCTCTGTAGCTGTC +
Preference number: 4 (lower is better)
Translates to: TEGFSSVNFGGRQECSCLLFVRL*GSSVAV
Trigger: GACAGCTACAGAGCTTCCTCACAGGCGAACAAACAA...TAGGCAGGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp TGTAATCCATCCCAGTGCTTTGTGAAGCTGTGGTGGGAAGATCACTTGAGGCCATTGTTTGTTCGCCTGTaGGGAAGCTCTGTAGCTGTC +
Preference number: 4 (lower is better)
Translates to: CNPSQCFVKLWWEDHLRPLFVRL*GSSVAV
Trigger: GACAGCTACAGAGCTTCCTCACAGGCGAACAAACAA...TGGCCTCAAGTGATCTTCCCACCACAGCTTCACAAAGCACTGGGATGGATTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644587.1
CDS-3UTR TCA 90 bp AAAAGTACGTCAAAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGGTATTACGCTGTATACGCACTaGTTCTCCTGGGACACACAA +
Preference number: 4 (lower is better)
Translates to: KSTSKGASQSQESMVPGITLYTH*FSWDTQ
Trigger: TTGTGTGTCCCAGGAGAATCAGTGCGTATACAGCGT...AATACCTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTTTGACGTACTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR TCA 90 bp GCCTTGGGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAATGTGGCTTTTCGGTGTaGACACTTTCAATTGTGTTA +
Preference number: 4 (lower is better)
Translates to: ALGSPMGYTQETPPARPECGFSV*TLSIVL
Trigger: TAACACAATTGAAAGTGTTCACACCGAAAAGCCACA...TTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCCCAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp CAAGTGACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCCCACCCAGGGTGGTTTaGTACGTGAAAGTTGAATCC +
Preference number: 4 (lower is better)
Translates to: QVTEGFSSVNFGGRQECSPPRVV*YVKVES
Trigger: GGATTCAACTTTCACGTATCAAACCACCCTGGGTGG...GGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGTCACTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp CAAGTGACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCTCCTTCATAGTGGGATaGCTGTCAAGAGCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: QVTEGFSSVNFGGRQECSSFIVG*LSRAWP
Trigger: TGGCCAAGCTCTTGACAGTCATCCCACTATGAAGGA...GGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGTCACTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp ACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCTGCCTATCCTTCATAGTGGGATaGCTGTCAAGAGCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: TEGFSSVNFGGRQECSCLSFIVG*LSRAWP
Trigger: TGGCCAAGCTCTTGACAGTCATCCCACTATGAAGGA...TAGGCAGGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp AACAAGGCAAGGGAAAACACACACAGGGGCATCTACTTGCTGGAAACATGTTGGCAGGCAATCAGTCGGTaGGGATTCAGGTGTGGAACT +
Preference number: 4 (lower is better)
Translates to: NKARENTHRGIYLLETCWQAISR*GFRCGT
Trigger: AGTTCCACACCTGAATCCTCACCGACTGATTGCCTG...CCAACATGTTTCCAGCAAGTAGATGCCCCTGTGTGTGTTTTCCCTTGCCTTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp AATCACCACATCATTCCCAACTTGTCACTCATGCTTCAGATGACGAAAATGCCAGTTAGTGGCCTCCACTaGGGACCCAGGCATGGACAG +
Preference number: 4 (lower is better)
Translates to: NHHIIPNLSLMLQMTKMPVSGLH*GPRHGQ
Trigger: CTGTCCATGCCTGGGTCCTCAGTGGAGGCCACTAAC...TGGCATTTTCGTCATCTGAAGCATGAGTGACAAGTTGGGAATGATGTGGTGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp CTTTCACATACACAGGTGCGTGGAGATGCCCACTCCCATAGGGTCCAAAGTGACGATCACATTTGGAGATaGGAAACGAGGTGTTCTCGA +
Preference number: 4 (lower is better)
Translates to: LSHTQVRGDAHSHRVQSDDHIWR*ETRCSR
Trigger: TCGAGAACACCTCGTTTCTCATCTCCAAATGTGATC...GTCACTTTGGACCCTATGGGAGTGGGCATCTCCACGCACCTGTGTATGTGAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp CATGGCTTTGTTTCTTCCCAAACCTGCCTGATGTCAAAAGTACGTCAAAAGGAGCCTGTAACATTGCTCTaGTCACCCAGGGCCCGACCT +
Preference number: 4 (lower is better)
Translates to: HGFVSSQTCLMSKVRQKEPVTLL*SPRARP
Trigger: AGGTCGGGCCCTGGGTGATCAGAGCAATGTTACAGG...CTCCTTTTGACGTACTTTTGACATCAGGCAGGTTTGGGAAGAAACAAAGCCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp ACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCTGCCTACCGTGCTGCTGTCAGTaGACATTTGCAAGGAAAGTG +
Preference number: 4 (lower is better)
Translates to: TEGFSSVNFGGRQECSCLPCCCQ*TFARKV
Trigger: CACTTTCCTTGCAAATGTTCACTGACAGCAGCACGG...TAGGCAGGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp CCGGTCTTTGGTAAACAGACGCTTAAGTTGACAACTTGGACTTGGCCAATACTGCCAATACAGTCATCGTaGCAGAACGCACCGCAGCCT +
Preference number: 4 (lower is better)
Translates to: PVFGKQTLKLTTWTWPILPIQSS*QNAPQP
Trigger: AGGCTGCGGTGCGTTCTGTCACGATGACTGTATTGG...CAGTATTGGCCAAGTCCAAGTTGTCAACTTAAGCGTCTGTTTACCAAAGACCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp AGTGGAAGACTGGCATTTCTACTTAGTTCAGGTAGGTTAACTCCCTTGGTGGAGCCAATACAGTCATCGTaGCAGAACGCACCGCAGCCT +
Preference number: 4 (lower is better)
Translates to: SGRLAFLLSSGRLTPLVEPIQSS*QNAPQP
Trigger: AGGCTGCGGTGCGTTCTGTCACGATGACTGTATTGG...CTCCACCAAGGGAGTTAACCTACCTGAACTAAGTAGAAATGCCAGTCTTCCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp AACAAGGCAAGGGAAAACACACACAGGGGCATCTACTTGCTGGAAACATGTTGGCCGTCAACTGGCAAATaGCTCAACTGTGACCCTGAG +
Preference number: 4 (lower is better)
Translates to: NKARENTHRGIYLLETCWPSTGK*LNCDPE
Trigger: CTCAGGGTCACAGTTGAGTCATTTGCCAGTTGACGG...CCAACATGTTTCCAGCAAGTAGATGCCCCTGTGTGTGTTTTCCCTTGCCTTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp GAGAATGCAACCTTCTTGCTTCAGTTTCAAGTCCCTCTGGGAGTCAGGCAGTCCAAACATCTGGACGGCTaGCTCACAAGGTCTACAGAT +
Preference number: 4 (lower is better)
Translates to: ENATFLLQFQVPLGVRQSKHLDG*LTRSTD
Trigger: ATCTGTAGACCTTGTGAGTCAGCCGTCCAGATGTTT...GGACTGCCTGACTCCCAGAGGGACTTGAAACTGAAGCAAGAAGGTTGCATTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp ATTAGGAAGAGACGTTCATGTTCTCTGTACAATACATCCATTTACAGAATCAGCAGCAGGTCCAGCCGGTaGCCCAACAGGGCATCGGGC +
Preference number: 4 (lower is better)
Translates to: IRKRRSCSLYNTSIYRISSRSSR*PNRASG
Trigger: GCCCGATGCCCTGTTGGGTCACCGGCTGGACCTGCT...GCTGATTCTGTAAATGGATGTATTGTACAGAGAACATGAACGTCTCTTCCTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp CAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACAGCACACTCATGCTTCAGATaGCGAAAATGCCACATCAGA +
Preference number: 4 (lower is better)
Translates to: QPGRSQVNHFTLTSSSTAHSCFR*RKCHIR
Trigger: TCTGATGTGGCATTTTCGTCATCTGAAGCATGAGTG...TGCTGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR TCA 90 bp GGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACAGCACTCAGTAACAGACGCTTAAGTTaGCAACTTGGACTTGGCCAA +
Preference number: 4 (lower is better)
Translates to: GRSQVNHFTLTSSSTALSNRRLS*QLGLGQ
Trigger: TTGGCCAAGTCCAAGTTGTCAACTTAAGCGTCTGTT...ACTGAGTGCTGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp ACCTGTAATCCATCCCAGTGCTTTGTGAAGCTGTGGTGGGAAGATCACTTGAGGTCCCTGGGCAACAAATaGCTAGGGAAGAGGATAGCA +
Preference number: 4 (lower is better)
Translates to: TCNPSQCFVKLWWEDHLRSLGNK*LGKRIA
Trigger: TGCTATCCTCTTCCCTAGTCATTTGTTGCCCAGGGA...CCTCAAGTGATCTTCCCACCACAGCTTCACAAAGCACTGGGATGGATTACAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555343.2
CDS-3UTR GCA 90 bp CAAGTGACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCAGGAAGAGGAGCTGCTaGTGGAAGTGTGATGGTAAG +
Preference number: 4 (lower is better)
Translates to: QVTEGFSSVNFGGRQECSRKRSC*WKCDGK
Trigger: CTTACCATCACACTTCCAGCAGCAGCTCCTCTTCCT...GGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGTCACTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp AGATCAGTGTCAAACTGTACCCTTGAGTGTCCCCAAAGGTTCCAGCAGAGGGAAGAGCGTTTCTTAAAATaGCCATCTCGCTGTCGGGTG +
Preference number: 4 (lower is better)
Translates to: RSVSNCTLECPQRFQQREERFLK*PSRCRV
Trigger: CACCCGACAGCGAGATGGGCATTTTAAGAAACGCTC...TTCCCTCTGCTGGAACCTTTGGGGACACTCAAGGGTACAGTTTGACACTGATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR GCA 90 bp CAAGGCAAGGGAAAACACACACAGGGGCATCTACTTGCTGGAAACATGTTGGGAGAGCGTTTCTTAAAATaGCCATCTCGCTGTCGGGTG +
Preference number: 4 (lower is better)
Translates to: QGKGKHTQGHLLAGNMLGERFLK*PSRCRV
Trigger: CACCCGACAGCGAGATGGGCATTTTAAGAAACGCTC...TCCCAACATGTTTCCAGCAAGTAGATGCCCCTGTGTGTGTTTTCCCTTGCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR GCA 90 bp CAGACGCTTAAGTTGACAACTTGGACTTGGCCAATACTGCATTCTAAATCACCAGGGACTGCTCAGCCCTaGTGGGTCAGTCTTAGCCTC +
Preference number: 4 (lower is better)
Translates to: QTLKLTTWTWPILHSKSPGTAQP*WVSLSL
Trigger: GAGGCTAAGACTGACCCAGCAGGGCTGAGCAGTCCC...TGGTGATTTAGAATGCAGTATTGGCCAAGTCCAAGTTGTCAACTTAAGCGTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR GCA 90 bp CCGGTCTTTGGTAAACAGACGCTTAAGTTGACAACTTGGACTTGGCCAATACTGAGATGCAGAGGCACGTaGCAAGTTGTCTGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: PVFGKQTLKLTTWTWPILRCRGT*QVVWLS
Trigger: GCTGAGCCAGACAACTTGGCACGTGCCTCTGCATCT...CAGTATTGGCCAAGTCCAAGTTGTCAACTTAAGCGTCTGTTTACCAAAGACCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR GCA 90 bp TGTAGGAGGAGAGATGTGAAAAGCAAGATGCGTTTGCTCGGTGGCATGTGGGCATCAAATGCTCTGTTCTaGAGGCAATCAGTCGGTGAG +
Preference number: 4 (lower is better)
Translates to: CRRRDVKSKMRLLGGMWASNALF*RQSVGE
Trigger: CTCACCGACTGATTGCCTGCAGAACAGAGCATTTGA...TGCCCACATGCCACCGAGCAAACGCATCTTGCTTTTCACATCTCTCCTCCTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp CTTCCTGGGGGCTGCCCAGGGAACTCACCCATGAATCCAGAAGCACTTAACACTGGGATGGGTATCCAATaGAAAGAACTGTTAGAAACG +
Preference number: 4 (lower is better)
Translates to: LPGGCPGNSPMNPEALNTGMGIQ*KELLET
Trigger: CGTTTCTAACAGTTCTTTGCATTGGATACCCATCCC...AGTGTTAAGTGCTTCTGGATTCATGGGTGAGTTCCCTGGGCAGCCCCCAGGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp CAAGTGACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCACCGTGAGGACTCAGTaGTTCAGAGTCTCCGTTGAT +
Preference number: 4 (lower is better)
Translates to: QVTEGFSSVNFGGRQECSTVRTQ*FRVSVD
Trigger: ATCAACGGAGACTCTGAAGCACTGAGTCCTCACGGT...GGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGTCACTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GTGACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCTGCAGATCCCTTTGTCACTaGAGCTTCTCTAGTGTCAGC +
Preference number: 4 (lower is better)
Translates to: VTEGFSSVNFGGRQECSCRSLCH*SFSSVS
Trigger: GCTGACACTAGAGAAGCTGCAGTGACAAAGGGATCT...GCAGGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp CAAGTGACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCCTACCCTGCAGCAACTaGATCACAAGTGGGTTAGTG +
Preference number: 4 (lower is better)
Translates to: QVTEGFSSVNFGGRQECSLPCSN*ITSGLV
Trigger: CACTAACCCACTTGTGATGCAGTTGCTGCAGGGTAG...GGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGTCACTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp AGATCAGTGTCAAACTGTACCCTTGAGTGTCCCCAAAGGTTCCAGCAGAGGGAACTACCCTGCAGCAACTaGATCACAAGTGGGTTAGTG +
Preference number: 4 (lower is better)
Translates to: RSVSNCTLECPQRFQQRELPCSN*ITSGLV
Trigger: CACTAACCCACTTGTGATGCAGTTGCTGCAGGGTAG...TTCCCTCTGCTGGAACCTTTGGGGACACTCAAGGGTACAGTTTGACACTGATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp ACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCTGCCTACATGTAAAGATCCCATaGGTAGCGAGCCATGGCTCT +
Preference number: 4 (lower is better)
Translates to: TEGFSSVNFGGRQECSCLHVKIP*VASHGS
Trigger: AGAGCCATGGCTCGCTACGCATGGGATCTTTACATG...TAGGCAGGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp CTTGGTGGAGAATGCAACCTTCTTGCTTCAGTTTCAAGTCCCTCTGGGAGTCAGTCCTGGCAAGACCAGTaGCTGTTTCACAGCTATCTG +
Preference number: 4 (lower is better)
Translates to: LGGECNLLASVSSPSGSQSWQDQ*LFHSYL
Trigger: CAGATAGCTGTGAAACAGGCACTGGTCTTGCCAGGA...CTGACTCCCAGAGGGACTTGAAACTGAAGCAAGAAGGTTGCATTCTCCACCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp AGATCAGTGTCAAACTGTACCCTTGAGTGTCCCCAAAGGTTCCAGCAGAGGGAATCCTGGCAAGACCAGTaGCTGTTTCACAGCTATCTG +
Preference number: 4 (lower is better)
Translates to: RSVSNCTLECPQRFQQRESWQDQ*LFHSYL
Trigger: CAGATAGCTGTGAAACAGGCACTGGTCTTGCCAGGA...TTCCCTCTGCTGGAACCTTTGGGGACACTCAAGGGTACAGTTTGACACTGATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GAGAATGCAACCTTCTTGCTTCAGTTTCAAGTCCCTCTGGGAGTCAGGCAGTCCAACTTGGGACTGCCTTaGAATTCTTTTGGGGTGCTC +
Preference number: 4 (lower is better)
Translates to: ENATFLLQFQVPLGVRQSNLGLP*NSFGVL
Trigger: GAGCACCCCAAAAGAATTGCAAGGCAGTCCCAAGTT...GGACTGCCTGACTCCCAGAGGGACTTGAAACTGAAGCAAGAAGGTTGCATTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp ACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCTGCCTACAGACATGGAGTTTGTaGTTGGTCCCAACTTCCCAC +
Preference number: 4 (lower is better)
Translates to: TEGFSSVNFGGRQECSCLQTWSL*LVPTSH
Trigger: GTGGGAAGTTGGGACCAAGCACAAACTCCATGTCTG...TAGGCAGGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp CTTGGTGGAGAATGCAACCTTCTTGCTTCAGTTTCAAGTCCCTCTGGGAGTCAGCAGACATGGAGTTTGTaGTTGGTCCCAACTTCCCAC +
Preference number: 4 (lower is better)
Translates to: LGGECNLLASVSSPSGSQQTWSL*LVPTSH
Trigger: GTGGGAAGTTGGGACCAAGCACAAACTCCATGTCTG...CTGACTCCCAGAGGGACTTGAAACTGAAGCAAGAAGGTTGCATTCTCCACCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACAAGCTTCCCATAAAATaGCTGCTTGATGCTGAGTTG +
Preference number: 4 (lower is better)
Translates to: GDPTGHRATWQVTSQSFHKLPIK*LLDAEL
Trigger: CAACTCAGCATCAAGCAGGCATTTTATGGGAAGCTT...GTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp CTGGCATTTCTACTTAGTTCAGGTAGGTTAACTCCCTTGGTGGAGAATGCAACCCACACTGGAGCGAGATaGTTTCCACCGTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: LAFLLSSGRLTPLVENATHTGAR*FPPCCC
Trigger: ACAGCAGCACGGTGGAAAGCATCTCGCTCCAGTGTG...GGTTGCATTCTCCACCAAGGGAGTTAACCTACCTGAACTAAGTAGAAATGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCCAAAGGCAAGAGTGCTCCTaGCTAAAGAGTATTATATCA +
Preference number: 4 (lower is better)
Translates to: AQWVIPRKPLQQDQKGRQRQECS*LKSIIS
Trigger: TGATATAATACTCTTTAGGCAGGAGCACTCTTGCCT...TTGGCGACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp CAAGTGACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCGGGGGAAGGCAAGAGTaGTCCTGCCTAAAGAGTATT +
Preference number: 4 (lower is better)
Translates to: QVTEGFSSVNFGGRQECSGGRQE*SCLKSI
Trigger: AATACTCTTTAGGCAGGAGCACTCTTGCCTTCCCCC...GGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGTCACTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GTGACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCTGCGTTACTTTAACCCTGTaGTGGCTTCTTTCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: VTEGFSSVNFGGRQECSCVTLTL*WLLSWP
Trigger: TGGCCAGGAAAGAAGCCAGCACAGGGTTAAAGTAAC...GCAGGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp AACAAGGCAAGGGAAAACACACACAGGGGCATCTACTTGCTGGAAACATGTTGGTTTCACATACACAGGTaGGTGGAGATGCCCACTCCC +
Preference number: 4 (lower is better)
Translates to: NKARENTHRGIYLLETCWFHIHR*VEMPTP
Trigger: GGGAGTGGGCATCTCCACGCACCTGTGTATGTGAAA...CCAACATGTTTCCAGCAAGTAGATGCCCCTGTGTGTGTTTTCCCTTGCCTTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp AACAAGGCAAGGGAAAACACACACAGGGGCATCTACTTGCTGGAAACATGTTGGAAAGCAAGATGCGTTTaGTCGGTGGCATGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: NKARENTHRGIYLLETCWKARCV*SVACGQ
Trigger: CTGCCCACATGCCACCGAGCAAACGCATCTTGCTTT...CCAACATGTTTCCAGCAAGTAGATGCCCCTGTGTGTGTTTTCCCTTGCCTTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR GCA 90 bp ACCTGTAATCCATCCCAGTGCTTTGTGAAGCTGTGGTGGGAAGATCACTTGAGGGGAAGCTATTTCACCTaGAAGTCCTCTGACGCTCTG +
Preference number: 4 (lower is better)
Translates to: TCNPSQCFVKLWWEDHLRGSYFT*KSSDAL
Trigger: CAGAGCGTCAGAGGACTTGCAGGTGAAATAGCTTCC...CCTCAAGTGATCTTCCCACCACAGCTTCACAAAGCACTGGGATGGATTACAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649901.1
CDS-3UTR CCA 90 bp TTCACCACTCACAGTGCTGGCTTCATTAGACCCACAGCTCTCCACATCAGCCGTCTGCAGAATCTGTTTTaGTGTCATTGGAGCATCCGA +
Preference number: 4 (lower is better)
Translates to: FTTHSAGFIRPTALHISRLQNLF*CHWSIR
Trigger: TCGGATGCTCCAATGACACCAAAACAGATTCTGCAG...ACGGCTGATGTGGAGAGCTGTGGGTCTAATGAAGCCAGCACTGTGAGTGGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644587.1
CDS-3UTR CCA 90 bp CTTGGTGGAGAATGCAACCTTCTTGCTTCAGTTTCAAGTCCCTCTGGGAGTCAGAAGAGGAGCTGCTGCTaGAAGTGTGATGGTAAGGCA +
Preference number: 4 (lower is better)
Translates to: LGGECNLLASVSSPSGSQKRSCC*KCDGKA
Trigger: TGCCTTACCATCACACTTCCAGCAGCAGCTCCTCTT...CTGACTCCCAGAGGGACTTGAAACTGAAGCAAGAAGGTTGCATTCTCCACCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CAGACGCTTAAGTTGACAACTTGGACTTGGCCAATACTGCATTCTAAATCACCATCGCTGTCGGGTGGCTaGACCACGCTGTATACGCAC +
Preference number: 4 (lower is better)
Translates to: QTLKLTTWTWPILHSKSPSLSGG*TTLYTH
Trigger: GTGCGTATACAGCGTGGTCCAGCCACCCGACAGCGA...TGGTGATTTAGAATGCAGTATTGGCCAAGTCCAAGTTGTCAACTTAAGCGTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp TGTAGGAGGAGAGATGTGAAAAGCAAGATGCGTTTGCTCGGTGGCATGTGGGCATCTGGTTCGGAGATCTaGCCGAGAGCGTTTCTTAAA +
Preference number: 4 (lower is better)
Translates to: CRRRDVKSKMRLLGGMWASGSEI*PRAFLK
Trigger: TTTAAGAAACGCTCTCGGCCAGATCTCCGAACCAGA...TGCCCACATGCCACCGAGCAAACGCATCTTGCTTTTCACATCTCTCCTCCTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp GTGACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCTGCTGTACAGATTCCTTCTaGCTCTGGTTCGGAGATCTG +
Preference number: 4 (lower is better)
Translates to: VTEGFSSVNFGGRQECSCCTDSF*LWFGDL
Trigger: CAGATCTCCGAACCAGAGCCAGAAGGAATCTGTACA...GCAGGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp AATCACCACATCATTCCCAACTTGTCACTCATGCTTCAGATGACGAAAATGCCAACTGCTCAGCCCTGCTaGGTCAGTCTTAGCCTCCCC +
Preference number: 4 (lower is better)
Translates to: NHHIIPNLSLMLQMTKMPTAQPC*VSLSLP
Trigger: GGGGAGGCTAAGACTGACCCAGCAGGGCTGAGCAGT...TGGCATTTTCGTCATCTGAAGCATGAGTGACAAGTTGGGAATGATGTGGTGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp CCGGTCTTTGGTAAACAGACGCTTAAGTTGACAACTTGGACTTGGCCAATACTGTTGTCTGGCTCAGCCTaGATCCGAGAAGCCACAGAC +
Preference number: 4 (lower is better)
Translates to: PVFGKQTLKLTTWTWPILLSGSA*IREATD
Trigger: GTCTGTGGCTTCTCGGATCCAGGCTGAGCCAGACAA...CAGTATTGGCCAAGTCCAAGTTGTCAACTTAAGCGTCTGTTTACCAAAGACCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp CTGGCATTTCTACTTAGTTCAGGTAGGTTAACTCCCTTGGTGGAGAATGCAACCTTGTCTGGCTCAGCCTaGATCCGAGAAGCCACAGAC +
Preference number: 4 (lower is better)
Translates to: LAFLLSSGRLTPLVENATLSGSA*IREATD
Trigger: GTCTGTGGCTTCTCGGATCCAGGCTGAGCCAGACAA...GGTTGCATTCTCCACCAAGGGAGTTAACCTACCTGAACTAAGTAGAAATGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GGGGGTAGTGGAAGACTGGCATTTCTACTTAGTTCAGGTAGGTTAACTCCCTTGGCTAGGAATTCTGTCTaGAGATGCAGAGGCACGTGC +
Preference number: 4 (lower is better)
Translates to: GGSGRLAFLLSSGRLTPLARNSV*RCRGTC
Trigger: GCACGTGCCTCTGCATCTCCAGACAGAATTCCTAGC...CAAGGGAGTTAACCTACCTGAACTAAGTAGAAATGCCAGTCTTCCACTACCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACAGCATCCTCTTCTGATCCTTaGGTTCCTGATCCACAGTTT +
Preference number: 4 (lower is better)
Translates to: QPGRSQVNHFTLTSSSTASSSDP*VPDPQF
Trigger: AAACTGTGGATCAGGAACCCAAGGATCAGAAGAGGA...TGCTGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp GTGACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCTGCCTCTTTAGTGGGCTGTaGCTTTTCGGTGTGAACACT +
Preference number: 4 (lower is better)
Translates to: VTEGFSSVNFGGRQECSCLFSGL*LFGVNT
Trigger: AGTGTTCACACCGAAAAGCCACAGCCCACTAAAGAG...GCAGGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GGGGGTAGTGGAAGACTGGCATTTCTACTTAGTTCAGGTAGGTTAACTCCCTTGAAAGTTGAATCCGGATaGGCGGGACTTTGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: GGSGRLAFLLSSGRLTPLKVESG*AGLWAP
Trigger: AGGAGCCCAAAGTCCCGCCCATCCGGATTCAACTTT...CAAGGGAGTTAACCTACCTGAACTAAGTAGAAATGCCAGTCTTCCACTACCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp ACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCTGCCTACACTTTCCCAGGAAGTaGTGCCAGACTCACATTCAG +
Preference number: 4 (lower is better)
Translates to: TEGFSSVNFGGRQECSCLHFPRK*CQTHIQ
Trigger: CTGAATGTGAGTCTGGCACCACTTCCTGGGAAAGTG...TAGGCAGGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CTTGGTGGAGAATGCAACCTTCTTGCTTCAGTTTCAAGTCCCTCTGGGAGTCAGCACTTTCCCAGGAAGTaGTGCCAGACTCACATTCAG +
Preference number: 4 (lower is better)
Translates to: LGGECNLLASVSSPSGSQHFPRK*CQTHIQ
Trigger: CTGAATGTGAGTCTGGCACCACTTCCTGGGAAAGTG...CTGACTCCCAGAGGGACTTGAAACTGAAGCAAGAAGGTTGCATTCTCCACCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp AACAAGGCAAGGGAAAACACACACAGGGGCATCTACTTGCTGGAAACATGTTGGTGTCTGCAGGAACGGTaGGTCCTTGCTCCTCATCAT +
Preference number: 4 (lower is better)
Translates to: NKARENTHRGIYLLETCWCLQER*VLAPHH
Trigger: ATGATGAGGAGCAAGGACCCACCGTTCCTGCAGACA...CCAACATGTTTCCAGCAAGTAGATGCCCCTGTGTGTGTTTTCCCTTGCCTTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GGGGGTAGTGGAAGACTGGCATTTCTACTTAGTTCAGGTAGGTTAACTCCCTTGTGTCTGCAGGAACGGTaGGTCCTTGCTCCTCATCAT +
Preference number: 4 (lower is better)
Translates to: GGSGRLAFLLSSGRLTPLCLQER*VLAPHH
Trigger: ATGATGAGGAGCAAGGACCCACCGTTCCTGCAGACA...CAAGGGAGTTAACCTACCTGAACTAAGTAGAAATGCCAGTCTTCCACTACCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACACATCATTCGATGGGATaGGTATCCAATGCAAAGAAC +
Preference number: 4 (lower is better)
Translates to: GQPGRSQVNHFTLTSSSTHHSMG*VSNAKN
Trigger: GTTCTTTGCATTGGATACCCATCCCATCGAATGATG...TGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTTACCTCATCATTCGATaGGATGGGTATCCAATGCAA +
Preference number: 4 (lower is better)
Translates to: DPTGHRATWQVTSQSFHPYLIIR*DGYPMQ
Trigger: TTGCATTGGATACCCATCCCATCGAATGATGAGGTA...AGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACAGCACTCAGTCTCTGGATTCTGGTTTaGGCTGTTTCACTACCTCAT +
Preference number: 4 (lower is better)
Translates to: GRSQVNHFTLTSSSTALSLWILV*AVSLPH
Trigger: ATGAGGTAGTGAAACAGCCCAAACCAGAATCCAGAG...ACTGAGTGCTGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp TCAATCATTTCACCCTCACGTCGAGCAGCACAGCACTCAGTGGCTCTGACAACACTGGGGCTCAACAGATaGTATGTGTTCTCTGGATTC +
Preference number: 4 (lower is better)
Translates to: SIISPSRRAAQHSVALTTLGLNR*YVFSGF
Trigger: GAATCCAGAGAACACATACCATCTGTTGAGCCCCAG...TGTTGTCAGAGCCACTGAGTGCTGTGCTGCTCGACGTGAGGGTGAAATGATTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp AACAAGGCAAGGGAAAACACACACAGGGGCATCTACTTGCTGGAAACATGTTGGCACTCCTCTCCAACCTaGGGCTCAACAGATGGTATG +
Preference number: 4 (lower is better)
Translates to: NKARENTHRGIYLLETCWHSSPT*GSTDGM
Trigger: CATACCATCTGTTGAGCCCCAGGTTGGAGAGGAGTG...CCAACATGTTTCCAGCAAGTAGATGCCCCTGTGTGTGTTTTCCCTTGCCTTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp AACAAGGCAAGGGAAAACACACACAGGGGCATCTACTTGCTGGAAACATGTTGGGCTGGTACTCAGTACTaGCCAGCAGTAGGGAATCTG +
Preference number: 4 (lower is better)
Translates to: NKARENTHRGIYLLETCWAGTQY*PAVGNL
Trigger: CAGATTCCCTACTGCTGGCCAGTACTGAGTACCAGC...CCAACATGTTTCCAGCAAGTAGATGCCCCTGTGTGTGTTTTCCCTTGCCTTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GTGACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCTGCAGCGAGCCATGGCTCTaGTCTTTTGTAAGTGGTACT +
Preference number: 4 (lower is better)
Translates to: VTEGFSSVNFGGRQECSCSEPWL*SFVSGT
Trigger: AGTACCACTTACAAAAGACCAGAGCCATGGCTCGCT...GCAGGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GAGAGGCAGGAGCAGGCATGGCTTTGTTTCTTCCCAAACCTGCCTGATGTCAAAAAGCCCTTAAAGAACTaGGGCTGCTTCCATCAACCA +
Preference number: 4 (lower is better)
Translates to: ERQEQAWLCFFPNLPDVKKPLKN*GCFHQP
Trigger: TGGTTGATGGAAGCAGCCCCAGTTCTTTAAGGGCTT...TTTGACATCAGGCAGGTTTGGGAAGAAACAAAGCCATGCCTGCTCCTGCCTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTAATGGGATTTGTCACTaGATGGAGGGAGTCAAAACT +
Preference number: 4 (lower is better)
Translates to: DPTGHRATWQVTSQSFHPNGICH*MEGVKT
Trigger: AGTTTTGACTCCCTCCATCCAGTGACAAATCCCATT...AGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GGGGGTAGTGGAAGACTGGCATTTCTACTTAGTTCAGGTAGGTTAACTCCCTTGGGTAGTAAGATCTCCTaGGCTCTTTCCTGGAGCAGC +
Preference number: 4 (lower is better)
Translates to: GGSGRLAFLLSSGRLTPLGSKIS*ALSWSS
Trigger: GCTGCTCCAGGAAAGAGCCCAGGAGATCTTACTACC...CAAGGGAGTTAACCTACCTGAACTAAGTAGAAATGCCAGTCTTCCACTACCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CAAGGCAAGGGAAAACACACACAGGGGCATCTACTTGCTGGAAACATGTTGGGACCGACCTGTCTGCTCTaGACCAAAGGAGATCACATT +
Preference number: 4 (lower is better)
Translates to: QGKGKHTQGHLLAGNMLGPTCLL*TKGDHI
Trigger: AATGTGATCTCCTTTGGTCCAGAGCAGACAGGTCGG...TCCCAACATGTTTCCAGCAAGTAGATGCCCCTGTGTGTGTTTTCCCTTGCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp ACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCTGCCTACCGACCTGTCTGCTCTaGACCAAAGGAGATCACATT +
Preference number: 4 (lower is better)
Translates to: TEGFSSVNFGGRQECSCLPTCLL*TKGDHI
Trigger: AATGTGATCTCCTTTGGTCCAGAGCAGACAGGTCGG...TAGGCAGGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp AAAAGTACGTCAAAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGGTATTCCGACCTGTCTGCTCTaGACCAAAGGAGATCACATT +
Preference number: 4 (lower is better)
Translates to: KSTSKGASQSQESMVPGIPTCLL*TKGDHI
Trigger: AATGTGATCTCCTTTGGTCCAGAGCAGACAGGTCGG...AATACCTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTTTGACGTACTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GGGGGTAGTGGAAGACTGGCATTTCTACTTAGTTCAGGTAGGTTAACTCCCTTGCCCACTGGGAAAAACTaGAGGGATCTCAGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: GGSGRLAFLLSSGRLTPLPTGKN*RDLSRK
Trigger: CTTCCTGCTGAGATCCCTCCAGTTTTTCCCAGTGGG...CAAGGGAGTTAACCTACCTGAACTAAGTAGAAATGCCAGTCTTCCACTACCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CCGGTCTTTGGTAAACAGACGCTTAAGTTGACAACTTGGACTTGGCCAATACTGAGCCCAGTCTTCCCTTaGAGTCTGTACCCCACCAGA +
Preference number: 4 (lower is better)
Translates to: PVFGKQTLKLTTWTWPILSPVFP*SLYPTR
Trigger: TCTGGTGGGGTACAGACTCCAAGGGAAGACTGGGCT...CAGTATTGGCCAAGTCCAAGTTGTCAACTTAAGCGTCTGTTTACCAAAGACCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp TTTGTTTCTTCCCAAACCTGCCTGATGTCAAAAGTACGTCAAAAGGAGCCTCACCAGGCTGGCTGGCCTTaGGCAGCCCAATGGGTTATA +
Preference number: 4 (lower is better)
Translates to: FVSSQTCLMSKVRQKEPHQAGWP*AAQWVI
Trigger: TATAACCCATTGGGCTGCCCAAGGCCAGCCAGCCTG...GTGAGGCTCCTTTTGACGTACTTTTGACATCAGGCAGGTTTGGGAAGAAACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CTTTCACATACACAGGTGCGTGGAGATGCCCACTCCCATAGGGTCCAAAGTGACGGGGTAGTGGAAGACTaGCATTTCTACTTAGTTCAG +
Preference number: 4 (lower is better)
Translates to: LSHTQVRGDAHSHRVQSDGVVED*HFYLVQ
Trigger: CTGAACTAAGTAGAAATGCCAGTCTTCCACTACCCC...GTCACTTTGGACCCTATGGGAGTGGGCATCTCCACGCACCTGTGTATGTGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp AGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTAAACGGGGTAGTGGAAGACTaGCATTTCTACTTAGTTCAG +
Preference number: 4 (lower is better)
Translates to: REEEDWTCLGPCSRSLVNGVVED*HFYLVQ
Trigger: CTGAACTAAGTAGAAATGCCAGTCTTCCACTACCCC...GTTTACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CAAGTGACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCTGCTGGCTTCTTTCCTaGCCATCAACTCCCCAAAGT +
Preference number: 4 (lower is better)
Translates to: QVTEGFSSVNFGGRQECSCWLLS*PSTPQS
Trigger: ACTTTGGGGAGTTGATGGCCAGGAAAGAAGCCAGCA...GGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGTCACTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CAAGTGACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCTCACCTGCAAACATCTaGACGGCTGACTCACAAGGT +
Preference number: 4 (lower is better)
Translates to: QVTEGFSSVNFGGRQECSSPANI*TADSQG
Trigger: ACCTTGTGAGTCAGCCGTCCAGATGTTTGCAGGTGA...GGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGTCACTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp AAAAGTACGTCAAAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGGTATTGGGGCATCTACTTGCTaGAAACATGTTGGGAGAGAG +
Preference number: 4 (lower is better)
Translates to: KSTSKGASQSQESMVPGIGASTC*KHVGRE
Trigger: CTCTCTCCCAACATGTTTCCAGCAAGTAGATGCCCC...AATACCTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTTTGACGTACTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp AACAAGGCAAGGGAAAACACACACAGGGGCATCTACTTGCTGGAAACATGTTGGCTCTGGGCAGCCTCATaGACCAGATCAGTGTCAAAC +
Preference number: 4 (lower is better)
Translates to: NKARENTHRGIYLLETCWLWAAS*TRSVSN
Trigger: GTTTGACACTGATCTGGTCCATGAGGCTGCCCAGAG...CCAACATGTTTCCAGCAAGTAGATGCCCCTGTGTGTGTTTTCCCTTGCCTTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp TGTAATCCATCCCAGTGCTTTGTGAAGCTGTGGTGGGAAGATCACTTGAGGCCATTCCCTCCACGCACCTaGTTTAGATTGGGAAAGCTC +
Preference number: 4 (lower is better)
Translates to: CNPSQCFVKLWWEDHLRPFPPRT*FRLGKL
Trigger: GAGCTTTCCCAATCTAAACCAGGTGCGTGGAGGGAA...TGGCCTCAAGTGATCTTCCCACCACAGCTTCACAAAGCACTGGGATGGATTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649901.1
CDS-3UTR TCA 90 bp TGTAATCCATCCCAGTGCTTTGTGAAGCTGTGGTGGGAAGATCACTTGAGGCCAAGTCCTCTGACGCTCTaGACACAAAATTCACAACCC +
Preference number: 4 (lower is better)
Translates to: CNPSQCFVKLWWEDHLRPSPLTL*TQNSQP
Trigger: GGGTTGTGAATTTTGTGTTCAGAGCGTCAGAGGACT...TGGCCTCAAGTGATCTTCCCACCACAGCTTCACAAAGCACTGGGATGGATTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649901.1
CDS-3UTR TCA 90 bp GAGAATGCAACCTTCTTGCTTCAGTTTCAAGTCCCTCTGGGAGTCAGGCAGTCCTACCTGCAAGTCCTCTaGCGCTCTGAACACAAAATT +
Preference number: 4 (lower is better)
Translates to: ENATFLLQFQVPLGVRQSYLQVL*RSEHKI
Trigger: AATTTTGTGTTCAGAGCGTCAGAGGACTTGCAGGTA...GGACTGCCTGACTCCCAGAGGGACTTGAAACTGAAGCAAGAAGGTTGCATTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306058.9
CDS-3UTR TCA 90 bp AGATCAGTGTCAAACTGTACCCTTGAGTGTCCCCAAAGGTTCCAGCAGAGGGAAGTCCTTCTGCCTCTATaGCCTGCAGAATCTGTTTTG +
Preference number: 4 (lower is better)
Translates to: RSVSNCTLECPQRFQQREVLLPL*PAESVL
Trigger: CAAAACAGATTCTGCAGGTCATAGAGGCAGAAGGAC...TTCCCTCTGCTGGAACCTTTGGGGACACTCAAGGGTACAGTTTGACACTGATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR TCA 90 bp ACCTGTAATCCATCCCAGTGCTTTGTGAAGCTGTGGTGGGAAGATCACTTGAGGGTCCTTCTGCCTCTATaGCCTGCAGAATCTGTTTTG +
Preference number: 4 (lower is better)
Translates to: TCNPSQCFVKLWWEDHLRVLLPL*PAESVL
Trigger: CAAAACAGATTCTGCAGGTCATAGAGGCAGAAGGAC...CCTCAAGTGATCTTCCCACCACAGCTTCACAAAGCACTGGGATGGATTACAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000555343.2
ENST00000642676.1
ENST00000645035.1
ENST00000645337.1
ENST00000649901.1
CDS-3UTR TCA 90 bp TGTAATCCATCCCAGTGCTTTGTGAAGCTGTGGTGGGAAGATCACTTGAGGCCAGTCCTTCTGCCTCTATaGCCTGCAGAATCTGTTTTG +
Preference number: 4 (lower is better)
Translates to: CNPSQCFVKLWWEDHLRPVLLPL*PAESVL
Trigger: CAAAACAGATTCTGCAGGTCATAGAGGCAGAAGGAC...TGGCCTCAAGTGATCTTCCCACCACAGCTTCACAAAGCACTGGGATGGATTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000555343.2
ENST00000642676.1
ENST00000644587.1
ENST00000645035.1
ENST00000645337.1
ENST00000649901.1
CDS-3UTR TCA 90 bp GAGAATGCAACCTTCTTGCTTCAGTTTCAAGTCCCTCTGGGAGTCAGGCAGTCCGAAAGAGGTCGACTCTaGGATTCTGTAGAACAGGAT +
Preference number: 4 (lower is better)
Translates to: ENATFLLQFQVPLGVRQSERGRL*DSVEQD
Trigger: ATCCTGTTCTACAGAATCTCAGAGTCGACCTCTTTC...GGACTGCCTGACTCCCAGAGGGACTTGAAACTGAAGCAAGAAGGTTGCATTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp TCAATCATTTCACCCTCACGTCGAGCAGCACAGCACTCAGTGGCTCTGACAACAGAAAGAGGTCGACTCTaGGATTCTGTAGAACAGGAT +
Preference number: 4 (lower is better)
Translates to: SIISPSRRAAQHSVALTTERGRL*DSVEQD
Trigger: ATCCTGTTCTACAGAATCTCAGAGTCGACCTCTTTC...TGTTGTCAGAGCCACTGAGTGCTGTGCTGCTCGACGTGAGGGTGAAATGATTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp GAGAATGCAACCTTCTTGCTTCAGTTTCAAGTCCCTCTGGGAGTCAGGCAGTCCCTGACTTGCATCTCATaGGTAAATTCACCATCAGCC +
Preference number: 4 (lower is better)
Translates to: ENATFLLQFQVPLGVRQSLTCIS*VNSPSA
Trigger: GGCTGATGGTGAATTTACTCATGAGATGCAAGTCAG...GGACTGCCTGACTCCCAGAGGGACTTGAAACTGAAGCAAGAAGGTTGCATTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp AGATCAGTGTCAAACTGTACCCTTGAGTGTCCCCAAAGGTTCCAGCAGAGGGAACACGTTCTGCTGCAATaGCTCTTCTTTGGTCAAACC +
Preference number: 4 (lower is better)
Translates to: RSVSNCTLECPQRFQQREHVLLQ*LFFGQT
Trigger: GGTTTGACCAAAGAAGAGTCATTGCAGCAGAACGTG...TTCCCTCTGCTGGAACCTTTGGGGACACTCAAGGGTACAGTTTGACACTGATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR TCA 90 bp CCGGTCTTTGGTAAACAGACGCTTAAGTTGACAACTTGGACTTGGCCAATACTGCACACAAGCCACTTTTaGTTTCAGCCTCCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: PVFGKQTLKLTTWTWPILHTSHF*FQPPPG
Trigger: GCCAGGAGGAGGCTGAAATCAAAAGTGGCTTGTGTG...CAGTATTGGCCAAGTCCAAGTTGTCAACTTAAGCGTCTGTTTACCAAAGACCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR TCA 90 bp CATGGCTTTGTTTCTTCCCAAACCTGCCTGATGTCAAAAGTACGTCAAAAGGAGGTGTTACGAAAGGACTaGCGATCTTCAAGCCGGGGC +
Preference number: 4 (lower is better)
Translates to: HGFVSSQTCLMSKVRQKEVLRKD*RSSSRG
Trigger: GCCCCGGCTTGAAGATCGTCAGTCCTTTCGTAACAC...CTCCTTTTGACGTACTTTTGACATCAGGCAGGTTTGGGAAGAAACAAAGCCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR TCA 90 bp GGCTGCCCAGGGAACTCACCCATGAATCCAGAAGCACTTAACACTGGTGGTGGTTGTGGCTTTTCGGTGTaGACACTTTCAATTGTGTTA +
Preference number: 4 (lower is better)
Translates to: GCPGNSPMNPEALNTGGGCGFSV*TLSIVL
Trigger: TAACACAATTGAAAGTGTTCACACCGAAAAGCCACA...ACCACCACCAGTGTTAAGTGCTTCTGGATTCATGGGTGAGTTCCCTGGGCAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR TCA 90 bp CAGAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTATGTGGCTTTTCGGTGTaGACACTTTCAATTGTGTTA +
Preference number: 4 (lower is better)
Translates to: QREEEDWTCLGPCSRSLVCGFSV*TLSIVL
Trigger: TAACACAATTGAAAGTGTTCACACCGAAAAGCCACA...TACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR TCA 90 bp GGGGGTAGTGGAAGACTGGCATTTCTACTTAGTTCAGGTAGGTTAACTCCCTTGCCACCCAGGGTGGTTTaGTACGTGAAAGTTGAATCC +
Preference number: 4 (lower is better)
Translates to: GGSGRLAFLLSSGRLTPLPPRVV*YVKVES
Trigger: GGATTCAACTTTCACGTATCAAACCACCCTGGGTGG...CAAGGGAGTTAACCTACCTGAACTAAGTAGAAATGCCAGTCTTCCACTACCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp AAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGGTATTGCTGTGACAGGTCTTCAGAGTCTCCGTTaGTTTTCAGCTTTTCAATGT +
Preference number: 4 (lower is better)
Translates to: KGASQSQESMVPGIAVTGLQSLR*FSAFQC
Trigger: ACATTGAAAAGCTGAAAATCAACGGAGACTCTGAAG...ACCTGTCACAGCAATACCTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp CTTCCTGGGGGCTGCCCAGGGAACTCACCCATGAATCCAGAAGCACTTAACACTCTTCAGAGTCTCCGTTaGTTTTCAGCTTTTCAATGT +
Preference number: 4 (lower is better)
Translates to: LPGGCPGNSPMNPEALNTLQSLR*FSAFQC
Trigger: ACATTGAAAAGCTGAAAATCAACGGAGACTCTGAAG...AGTGTTAAGTGCTTCTGGATTCATGGGTGAGTTCCCTGGGCAGCCCCCAGGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp GTGACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCTGCCAATACACAGAGCTTTaGGGGTCCAATACAGTCATC +
Preference number: 4 (lower is better)
Translates to: VTEGFSSVNFGGRQECSCQYTEL*GSNTVI
Trigger: GATGACTGTATTGGACCCTCAAAGCTCTGTGTATTG...GCAGGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGTCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp AGTGGAAGACTGGCATTTCTACTTAGTTCAGGTAGGTTAACTCCCTTGGTGGAGCCGTCAACTGGCAAATaGCTCAACTGTGACCCTGAG +
Preference number: 4 (lower is better)
Translates to: SGRLAFLLSSGRLTPLVEPSTGK*LNCDPE
Trigger: CTCAGGGTCACAGTTGAGTCATTTGCCAGTTGACGG...CTCCACCAAGGGAGTTAACCTACCTGAACTAAGTAGAAATGCCAGTCTTCCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp GGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACAGTTAGTGGATCACACTaGGACAGAAAAGTTCCAAAT +
Preference number: 4 (lower is better)
Translates to: GQPGRSQVNHFTLTSSSTVSGSH*DRKVPN
Trigger: ATTTGGAACTTTTCTGTCTCAGTGTGATCCACTAAC...TGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp ACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCTGCCTACAGGGAACTCACCCATaGATCCAGAAGCACTTAACA +
Preference number: 4 (lower is better)
Translates to: TEGFSSVNFGGRQECSCLQGTHP*IQKHLT
Trigger: TGTTAAGTGCTTCTGGATTCATGGGTGAGTTCCCTG...TAGGCAGGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp GACCACTCCCAAGCTTACAGCAGGTTCATACAATGGTGTTTATTCAAAGATATAGCTTTCCCGCTCTGCTaGGGGACTGAGACAGGACCG +
Preference number: 4 (lower is better)
Translates to: DHSQAYSRFIQWCLFKDIAFPLC*GTETGP
Trigger: CGGTCCTGTCTCAGTCCCTCAGCAGAGCGGGAAAGC...TATATCTTTGAATAAACACCATTGTATGAACCTGCTGTAAGCTTGGGAGTGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542461.5
ENST00000646367.1
CDS-3UTR TCA 90 bp GCAAGAACCCTCAACTCTGTAATAAGTCGAAATACAAGATATAAGGCAGGAAACACTCCCCCGGGTGAATaGACGAAGCTGCCCCAGACC +
Preference number: 4 (lower is better)
Translates to: ARTLNSVISRNTRYKAGNTPPGE*TKLPQT
Trigger: GGTCTGGGGCAGCTTCGTTCATTCACCCGGGGGAGT...GTTTCCTGCCTTATATCTTGTATTTCGACTTATTACAGAGTTGAGGGTTCTTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646985.1
CDS-3UTR TCA 90 bp TGTAATCCATCCCAGTGCTTTGTGAAGCTGTGGTGGGAAGATCACTTGAGGCCACACCTGCAAGTCCTCTaGCGCTCTGAACACAAAATT +
Preference number: 4 (lower is better)
Translates to: CNPSQCFVKLWWEDHLRPHLQVL*RSEHKI
Trigger: AATTTTGTGTTCAGAGCGTCAGAGGACTTGCAGGTG...TGGCCTCAAGTGATCTTCCCACCACAGCTTCACAAAGCACTGGGATGGATTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649901.1
CDS-3UTR GCA 90 bp AACAAGGCAAGGGAAAACACACACAGGGGCATCTACTTGCTGGAAACATGTTGGAGGAAGAGGAGCTGCTaGTGGAAGTGTGATGGTAAG +
Preference number: 4 (lower is better)
Translates to: NKARENTHRGIYLLETCWRKRSC*WKCDGK
Trigger: CTTACCATCACACTTCCAGCAGCAGCTCCTCTTCCT...CCAACATGTTTCCAGCAAGTAGATGCCCCTGTGTGTGTTTTCCCTTGCCTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR GCA 90 bp CAAGGCAAGGGAAAACACACACAGGGGCATCTACTTGCTGGAAACATGTTGGGAAATTCTGTCTGGAGATaGAGAGGCACGTGCCAAGTT +
Preference number: 4 (lower is better)
Translates to: QGKGKHTQGHLLAGNMLGNSVWR*RGTCQV
Trigger: AACTTGGCACGTGCCTCTGCATCTCCAGACAGAATT...TCCCAACATGTTTCCAGCAAGTAGATGCCCCTGTGTGTGTTTTCCCTTGCCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR GCA 90 bp AGTGGAAGACTGGCATTTCTACTTAGTTCAGGTAGGTTAACTCCCTTGGTGGAGGATGCAGAGGCCGCCTaGTCAAAGGATTTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: SGRLAFLLSSGRLTPLVEDAEAA*SKDFLF
Trigger: GAAGAGGAAATCCTTTGAGCAGGCGGCCTCTGCATC...CTCCACCAAGGGAGTTAACCTACCTGAACTAAGTAGAAATGCCAGTCTTCCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp CTGGCATTTCTACTTAGTTCAGGTAGGTTAACTCCCTTGGTGGAGAATGCAACCCTTTTCGGGAAAGGATaGAGAGGCCGCCTGCTCAAA +
Preference number: 4 (lower is better)
Translates to: LAFLLSSGRLTPLVENATLFGKG*RGRLLK
Trigger: TTTGAGCAGGCGGCCTCTGCATCCTTTCCCGAAAAG...GGTTGCATTCTCCACCAAGGGAGTTAACCTACCTGAACTAAGTAGAAATGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp CTGGCATTTCTACTTAGTTCAGGTAGGTTAACTCCCTTGGTGGAGAATGCAACCAGGGGCAAGCTACCCTaGAGCAACTGCATCACAAGT +
Preference number: 4 (lower is better)
Translates to: LAFLLSSGRLTPLVENATRGKLP*SNCITS
Trigger: ACTTGTGATGCAGTTGCTGCAGGGTAGCTTGCCCCT...GGTTGCATTCTCCACCAAGGGAGTTAACCTACCTGAACTAAGTAGAAATGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp CCGGTCTTTGGTAAACAGACGCTTAAGTTGACAACTTGGACTTGGCCAATACTGAGGGGCAAGCTACCCTaGAGCAACTGCATCACAAGT +
Preference number: 4 (lower is better)
Translates to: PVFGKQTLKLTTWTWPILRGKLP*SNCITS
Trigger: ACTTGTGATGCAGTTGCTGCAGGGTAGCTTGCCCCT...CAGTATTGGCCAAGTCCAAGTTGTCAACTTAAGCGTCTGTTTACCAAAGACCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GAGAGGCAGGAGCAGGCATGGCTTTGTTTCTTCCCAAACCTGCCTGATGTCAAAGTCAAAACTTGGGACTaGCTTGCAATTCTTTTGGGG +
Preference number: 4 (lower is better)
Translates to: ERQEQAWLCFFPNLPDVKVKTWD*LAILLG
Trigger: CCCCAAAAGAATTGCAAGGCAGTCCCAAGTTTTGAC...TTTGACATCAGGCAGGTTTGGGAAGAAACAAAGCCATGCCTGCTCCTGCCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GGGGGTAGTGGAAGACTGGCATTTCTACTTAGTTCAGGTAGGTTAACTCCCTTGAGTTCCAGGGGACTATaGCCAGTAGCTTTCCTGTTC +
Preference number: 4 (lower is better)
Translates to: GGSGRLAFLLSSGRLTPLSSRGL*PVAFLF
Trigger: GAACAGGAAAGCTACTGGGCATAGTCCCCTGGAACT...CAAGGGAGTTAACCTACCTGAACTAAGTAGAAATGCCAGTCTTCCACTACCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp CATGGCTTTGTTTCTTCCCAAACCTGCCTGATGTCAAAAGTACGTCAAAAGGAGGCTTTGTGGCTCAGCTaGACCACACTTCCAGCAAGG +
Preference number: 4 (lower is better)
Translates to: HGFVSSQTCLMSKVRQKEALWLS*TTLPAR
Trigger: CCTTGCTGGAAGTGTGGTGCAGCTGAGCCACAAAGC...CTCCTTTTGACGTACTTTTGACATCAGGCAGGTTTGGGAAGAAACAAAGCCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp CATGGCTTTGTTTCTTCCCAAACCTGCCTGATGTCAAAAGTACGTCAAAAGGAGCACACTGGAGCGAGATaGTTTCCACCGTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: HGFVSSQTCLMSKVRQKEHTGAR*FPPCCC
Trigger: ACAGCAGCACGGTGGAAAGCATCTCGCTCCAGTGTG...CTCCTTTTGACGTACTTTTGACATCAGGCAGGTTTGGGAAGAAACAAAGCCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GTGACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCTGCTCCCTTGGTGGAGAATaGAACCTTCTTGCTTCAGTT +
Preference number: 4 (lower is better)
Translates to: VTEGFSSVNFGGRQECSCSLGGE*NLLASV
Trigger: AACTGAAGCAAGAAGGTTGCATTCTCCACCAAGGGA...GCAGGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGTCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp TCAATCATTTCACCCTCACGTCGAGCAGCACAGCACTCAGTGGCTCTGACAACAAACCAAGGTCAAACTTaGTCCGTCAACTGGCAAATG +
Preference number: 4 (lower is better)
Translates to: SIISPSRRAAQHSVALTTNQGQT*SVNWQM
Trigger: CATTTGCCAGTTGACGGAGCAAGTTTGACCTTGGTT...TGTTGTCAGAGCCACTGAGTGCTGTGCTGCTCGACGTGAGGGTGAAATGATTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp CTTTCACATACACAGGTGCGTGGAGATGCCCACTCCCATAGGGTCCAAAGTGACGTTTCTTCCCAAACCTaGCTGATGTCAAAAGTACGT +
Preference number: 4 (lower is better)
Translates to: LSHTQVRGDAHSHRVQSDVSSQT*LMSKVR
Trigger: ACGTACTTTTGACATCAGGCAGGTTTGGGAAGAAAC...GTCACTTTGGACCCTATGGGAGTGGGCATCTCCACGCACCTGTGTATGTGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp AGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTAAACGTTTCTTCCCAAACCTaGCTGATGTCAAAAGTACGT +
Preference number: 4 (lower is better)
Translates to: REEEDWTCLGPCSRSLVNVSSQT*LMSKVR
Trigger: ACGTACTTTTGACATCAGGCAGGTTTGGGAAGAAAC...GTTTACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR GCA 90 bp CAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACAGCAGGACTTGGCCAATACTaGATTCTAAATCACCACATC +
Preference number: 4 (lower is better)
Translates to: QPGRSQVNHFTLTSSSTAGLGQY*ILNHHI
Trigger: GATGTGGTGATTTAGAATGCAGTATTGGCCAAGTCC...TGCTGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR GCA 90 bp GGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACAGCACTCAGTGGACTTGGCCAATACTaGATTCTAAATCACCACATC +
Preference number: 4 (lower is better)
Translates to: GRSQVNHFTLTSSSTALSGLGQY*ILNHHI
Trigger: GATGTGGTGATTTAGAATGCAGTATTGGCCAAGTCC...ACTGAGTGCTGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CTTTCACATACACAGGTGCGTGGAGATGCCCACTCCCATAGGGTCCAAAGTGACCTGTTTTGGTGTCATTaGAGCATCCGAGTAGTTTTC +
Preference number: 4 (lower is better)
Translates to: LSHTQVRGDAHSHRVQSDLFWCH*SIRVVF
Trigger: GAAAACTACTCGGATGCTCCAATGACACCAAAACAG...GTCACTTTGGACCCTATGGGAGTGGGCATCTCCACGCACCTGTGTATGTGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp AGTGGAAGACTGGCATTTCTACTTAGTTCAGGTAGGTTAACTCCCTTGGTGGAGAGCTGTCCCTGGGATTaGAAAGAGGTCGACTCTGAG +
Preference number: 4 (lower is better)
Translates to: SGRLAFLLSSGRLTPLVESCPWD*KEVDSE
Trigger: CTCAGAGTCGACCTCTTTCCAATCCCAGGGACAGCT...CTCCACCAAGGGAGTTAACCTACCTGAACTAAGTAGAAATGCCAGTCTTCCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp AGTGGAAGACTGGCATTTCTACTTAGTTCAGGTAGGTTAACTCCCTTGGTGGAGGATGCAGATTCCACGTaGGCCCCGTTTACCTTCAGA +
Preference number: 4 (lower is better)
Translates to: SGRLAFLLSSGRLTPLVEDADST*APFTFR
Trigger: TCTGAAGGTAAACGGGGCCCACGTGGAATCTGCATC...CTCCACCAAGGGAGTTAACCTACCTGAACTAAGTAGAAATGCCAGTCTTCCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp AGTTCAGGTAGGTTAACTCCCTTGGTGGAGAATGCAACCTTCTTGCTTCAGTTTGCTTCATTTGACCTGTaGCTGGCTTCCGGAAGCCTC +
Preference number: 4 (lower is better)
Translates to: SSGRLTPLVENATFLLQFASFDL*LASGSL
Trigger: GAGGCTTCCGGAAGCCAGCCACAGGTCAAATGAAGC...AAACTGAAGCAAGAAGGTTGCATTCTCCACCAAGGGAGTTAACCTACCTGAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
CDS-3UTR CCA 90 bp ACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCTGCCTATGTGATGGTAAGGCATaGAAGGTCCGAGAGTTGATC +
Preference number: 4 (lower is better)
Translates to: TEGFSSVNFGGRQECSCLCDGKA*KVRELI
Trigger: GATCAACTCTCGGACCTTCCATGCCTTACCATCACA...TAGGCAGGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp AAAAGTACGTCAAAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGGTATTTGTACAGATTCCTTCTaGCTCTGGTTCGGAGATCTG +
Preference number: 4 (lower is better)
Translates to: KSTSKGASQSQESMVPGICTDSF*LWFGDL
Trigger: CAGATCTCCGAACCAGAGCCAGAAGGAATCTGTACA...AATACCTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTTTGACGTACTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp TTTGTTTCTTCCCAAACCTGCCTGATGTCAAAAGTACGTCAAAAGGAGCCTCACAGCCACAGACTCAACTaGGAATTCGGGACCCTCCAG +
Preference number: 4 (lower is better)
Translates to: FVSSQTCLMSKVRQKEPHSHRLN*EFGTLQ
Trigger: CTGGAGGGTCCCGAATTCCCAGTTGAGTCTGTGGCT...GTGAGGCTCCTTTTGACGTACTTTTGACATCAGGCAGGTTTGGGAAGAAACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp TTTGTTTCTTCCCAAACCTGCCTGATGTCAAAAGTACGTCAAAAGGAGCCTCACTTGTCTGGCTCAGCCTaGATCCGAGAAGCCACAGAC +
Preference number: 4 (lower is better)
Translates to: FVSSQTCLMSKVRQKEPHLSGSA*IREATD
Trigger: GTCTGTGGCTTCTCGGATCCAGGCTGAGCCAGACAA...GTGAGGCTCCTTTTGACGTACTTTTGACATCAGGCAGGTTTGGGAAGAAACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp AGTGGAAGACTGGCATTTCTACTTAGTTCAGGTAGGTTAACTCCCTTGGTGGAGATGGCAGTTCCGGCCTaGGTATGCTCCCCATTTAGA +
Preference number: 4 (lower is better)
Translates to: SGRLAFLLSSGRLTPLVEMAVPA*VCSPFR
Trigger: TCTAAATGGGGAGCATACCCAGGCCGGAACTGCCAT...CTCCACCAAGGGAGTTAACCTACCTGAACTAAGTAGAAATGCCAGTCTTCCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GGGGGTAGTGGAAGACTGGCATTTCTACTTAGTTCAGGTAGGTTAACTCCCTTGCCACTAGAGACGGAATaGGACCATTGTCTGCAGGAA +
Preference number: 4 (lower is better)
Translates to: GGSGRLAFLLSSGRLTPLPLETE*DHCLQE
Trigger: TTCCTGCAGACAATGGTCCCATTCCGTCTCTAGTGG...CAAGGGAGTTAACCTACCTGAACTAAGTAGAAATGCCAGTCTTCCACTACCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GAGAGGCAGGAGCAGGCATGGCTTTGTTTCTTCCCAAACCTGCCTGATGTCAAAATTCAGGTGTGGAACTaGGGGTCACATTTACAGGAT +
Preference number: 4 (lower is better)
Translates to: ERQEQAWLCFFPNLPDVKIQVWN*GSHLQD
Trigger: ATCCTGTAAATGTGACCCCCAGTTCCACACCTGAAT...TTTGACATCAGGCAGGTTTGGGAAGAAACAAAGCCATGCCTGCTCCTGCCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp AGATCAGTGTCAAACTGTACCCTTGAGTGTCCCCAAAGGTTCCAGCAGAGGGAAGTGAGGATTCAGGTGTaGAACTGGGGGTCACATTTA +
Preference number: 4 (lower is better)
Translates to: RSVSNCTLECPQRFQQREVRIQV*NWGSHL
Trigger: TAAATGTGACCCCCAGTTCCACACCTGAATCCTCAC...TTCCCTCTGCTGGAACCTTTGGGGACACTCAAGGGTACAGTTTGACACTGATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CTTGGTGGAGAATGCAACCTTCTTGCTTCAGTTTCAAGTCCCTCTGGGAGTCAGGTGAGGATTCAGGTGTaGAACTGGGGGTCACATTTA +
Preference number: 4 (lower is better)
Translates to: LGGECNLLASVSSPSGSQVRIQV*NWGSHL
Trigger: TAAATGTGACCCCCAGTTCCACACCTGAATCCTCAC...CTGACTCCCAGAGGGACTTGAAACTGAAGCAAGAAGGTTGCATTCTCCACCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GTGACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCTGCCTCTGGATTCTGGTTTaGGCTGTTTCACTACCTCAT +
Preference number: 4 (lower is better)
Translates to: VTEGFSSVNFGGRQECSCLWILV*AVSLPH
Trigger: ATGAGGTAGTGAAACAGCCCAAACCAGAATCCAGAG...GCAGGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGTCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACAGCACTCAGTATGGTATGTGTTCTCTaGATTCTGGTTTGGGCTGTT +
Preference number: 4 (lower is better)
Translates to: GRSQVNHFTLTSSSTALSMVCVL*ILVWAV
Trigger: AACAGCCCAAACCAGAATCCAGAGAACACATACCAT...ACTGAGTGCTGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp AGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTAAACATGGTATGTGTTCTCTaGATTCTGGTTTGGGCTGTT +
Preference number: 4 (lower is better)
Translates to: REEEDWTCLGPCSRSLVNMVCVL*ILVWAV
Trigger: AACAGCCCAAACCAGAATCCAGAGAACACATACCAT...GTTTACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CTGGCATTTCTACTTAGTTCAGGTAGGTTAACTCCCTTGGTGGAGAATGCAACCCACTCCTCTCCAACCTaGGGCTCAACAGATGGTATG +
Preference number: 4 (lower is better)
Translates to: LAFLLSSGRLTPLVENATHSSPT*GSTDGM
Trigger: CATACCATCTGTTGAGCCCCAGGTTGGAGAGGAGTG...GGTTGCATTCTCCACCAAGGGAGTTAACCTACCTGAACTAAGTAGAAATGCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp AGTTCAGGTAGGTTAACTCCCTTGGTGGAGAATGCAACCTTCTTGCTTCAGTTTCAGAGGCTGTATCCGTaGACTCACCGTGAGGACTCA +
Preference number: 4 (lower is better)
Translates to: SSGRLTPLVENATFLLQFQRLYP*THREDS
Trigger: TGAGTCCTCACGGTGAGTCCACGGATACAGCCTCTG...AAACTGAAGCAAGAAGGTTGCATTCTCCACCAAGGGAGTTAACCTACCTGAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACAGCACTCAGTCAGATTGGTTCCAATTaGGTTTCTCATCCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: GRSQVNHFTLTSSSTALSQIGSN*VSHPCP
Trigger: TGGACAAGGATGAGAAACCCAATTGGAACCAATCTG...ACTGAGTGCTGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp AGTGGAAGACTGGCATTTCTACTTAGTTCAGGTAGGTTAACTCCCTTGGTGGAGGACATGCTGTCATCGTaGGCTGGTGGAAGAACCTTC +
Preference number: 4 (lower is better)
Translates to: SGRLAFLLSSGRLTPLVEDMLSS*AGGRTF
Trigger: GAAGGTTCTTCCACCAGCCCACGATGACAGCATGTC...CTCCACCAAGGGAGTTAACCTACCTGAACTAAGTAGAAATGCCAGTCTTCCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp ACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCTGCCTAATGCGTAGCGAGCCATaGCTCTGGTCTTTTGTAAGT +
Preference number: 4 (lower is better)
Translates to: TEGFSSVNFGGRQECSCLMRSEP*LWSFVS
Trigger: ACTTACAAAAGACCAGAGCCATGGCTCGCTACGCAT...TAGGCAGGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GTGACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCTGCTGTTTCACAGCTATCTaGCAGAAGAGGCTCCTTCAA +
Preference number: 4 (lower is better)
Translates to: VTEGFSSVNFGGRQECSCCFTAI*QKRLLQ
Trigger: TTGAAGGAGCCTCTTCTGCCAGATAGCTGTGAAACA...GCAGGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGTCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GAGAGGCAGGAGCAGGCATGGCTTTGTTTCTTCCCAAACCTGCCTGATGTCAAAGAGGGAGTCAAAACTTaGGACTGCCTTGCAATTCTT +
Preference number: 4 (lower is better)
Translates to: ERQEQAWLCFFPNLPDVKEGVKT*DCLAIL
Trigger: AAGAATTGCAAGGCAGTCCCAAGTTTTGACTCCCTC...TTTGACATCAGGCAGGTTTGGGAAGAAACAAAGCCATGCCTGCTCCTGCCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp AACAAGGCAAGGGAAAACACACACAGGGGCATCTACTTGCTGGAAACATGTTGGCCGACCTGTCTGCTCTaGACCAAAGGAGATCACATT +
Preference number: 4 (lower is better)
Translates to: NKARENTHRGIYLLETCWPTCLL*TKGDHI
Trigger: AATGTGATCTCCTTTGGTCCAGAGCAGACAGGTCGG...CCAACATGTTTCCAGCAAGTAGATGCCCCTGTGTGTGTTTTCCCTTGCCTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CCGGTCTTTGGTAAACAGACGCTTAAGTTGACAACTTGGACTTGGCCAATACTGCATGGAGTTTGTGCTTaGTCCCAACTTCCCACTGGG +
Preference number: 4 (lower is better)
Translates to: PVFGKQTLKLTTWTWPILHGVCA*SQLPTG
Trigger: CCCAGTGGGAAGTTGGGACCAAGCACAAACTCCATG...CAGTATTGGCCAAGTCCAAGTTGTCAACTTAAGCGTCTGTTTACCAAAGACCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CAAGTGACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCCCAAAGTTTGCTTTGTaGCTCAGCTGCACCACACTT +
Preference number: 4 (lower is better)
Translates to: QVTEGFSSVNFGGRQECSPKFAL*LSCTTL
Trigger: AAGTGTGGTGCAGCTGAGCCACAAAGCAAACTTTGG...GGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGTCACTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp AGATCAGTGTCAAACTGTACCCTTGAGTGTCCCCAAAGGTTCCAGCAGAGGGAAGAAAGTGATGCACTGTaGCTCGCACCAAAGTTTGCT +
Preference number: 4 (lower is better)
Translates to: RSVSNCTLECPQRFQQREESDAL*LAPKFA
Trigger: AGCAAACTTTGGTGCGAGCCACAGTGCATCACTTTC...TTCCCTCTGCTGGAACCTTTGGGGACACTCAAGGGTACAGTTTGACACTGATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CAGAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTACACAAGGTCTACAGATaGCATTTTCATAGGAAAGAC +
Preference number: 4 (lower is better)
Translates to: QREEEDWTCLGPCSRSLVHKVYR*HFHRKD
Trigger: GTCTTTCCTATGAAAATGCCATCTGTAGACCTTGTG...TACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp AACAAGGCAAGGGAAAACACACACAGGGGCATCTACTTGCTGGAAACATGTTGGGGGGCATCTACTTGCTaGAAACATGTTGGGAGAGAG +
Preference number: 4 (lower is better)
Translates to: NKARENTHRGIYLLETCWGASTC*KHVGRE
Trigger: CTCTCTCCCAACATGTTTCCAGCAAGTAGATGCCCC...CCAACATGTTTCCAGCAAGTAGATGCCCCTGTGTGTGTTTTCCCTTGCCTTGTT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp CATGGCTTTGTTTCTTCCCAAACCTGCCTGATGTCAAAAGTACGTCAAAAGGAGAGGACTGGACATGTTTaGGCCCCTGTTCCCGGTCTT +
Preference number: 4 (lower is better)
Translates to: HGFVSSQTCLMSKVRQKERTGHV*APVPGL
Trigger: AAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCT...CTCCTTTTGACGTACTTTTGACATCAGGCAGGTTTGGGAAGAAACAAAGCCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp CTGGCATTTCTACTTAGTTCAGGTAGGTTAACTCCCTTGGTGGAGAATGCAACCCTCTGGGCAGCCTCATaGACCAGATCAGTGTCAAAC +
Preference number: 4 (lower is better)
Translates to: LAFLLSSGRLTPLVENATLWAAS*TRSVSN
Trigger: GTTTGACACTGATCTGGTCCATGAGGCTGCCCAGAG...GGTTGCATTCTCCACCAAGGGAGTTAACCTACCTGAACTAAGTAGAAATGCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp TGTAATCCATCCCAGTGCTTTGTGAAGCTGTGGTGGGAAGATCACTTGAGGCCAGCAAGCAAATTTCCTTaGGTGCCCAGGGTCATAAAC +
Preference number: 4 (lower is better)
Translates to: CNPSQCFVKLWWEDHLRPASKFP*VPRVIN
Trigger: GTTTATGACCCTGGGCACCCAAGGAAATTTGCTTGC...TGGCCTCAAGTGATCTTCCCACCACAGCTTCACAAAGCACTGGGATGGATTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555343.2
CDS-3UTR CCA 90 bp TGTAATCCATCCCAGTGCTTTGTGAAGCTGTGGTGGGAAGATCACTTGAGGCCATTTGTGAAGCTGTGGTaGGAAGATCACTTGAGGCCA +
Preference number: 4 (lower is better)
Translates to: CNPSQCFVKLWWEDHLRPFVKLW*EDHLRP
Trigger: TGGCCTCAAGTGATCTTCCCACCACAGCTTCACAAA...TGGCCTCAAGTGATCTTCCCACCACAGCTTCACAAAGCACTGGGATGGATTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000555343.2
ENST00000642676.1
ENST00000644587.1
ENST00000645035.1
ENST00000645337.1
ENST00000649901.1
CDS-3UTR CCA 90 bp ACCTGTAATCCATCCCAGTGCTTTGTGAAGCTGTGGTGGGAAGATCACTTGAGGTTTGTGAAGCTGTGGTaGGAAGATCACTTGAGGCCA +
Preference number: 4 (lower is better)
Translates to: TCNPSQCFVKLWWEDHLRFVKLW*EDHLRP
Trigger: TGGCCTCAAGTGATCTTCCCACCACAGCTTCACAAA...CCTCAAGTGATCTTCCCACCACAGCTTCACAAAGCACTGGGATGGATTACAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000555343.2
ENST00000642676.1
ENST00000645035.1
ENST00000645337.1
ENST00000649901.1
CDS-3UTR CCA 90 bp TGTAATCCATCCCAGTGCTTTGTGAAGCTGTGGTGGGAAGATCACTTGAGGCCATGCTTTGTGAAGCTGTaGTGGGAAGATCACTTGAGG +
Preference number: 4 (lower is better)
Translates to: CNPSQCFVKLWWEDHLRPCFVKL*WEDHLR
Trigger: CCTCAAGTGATCTTCCCACCACAGCTTCACAAAGCA...TGGCCTCAAGTGATCTTCCCACCACAGCTTCACAAAGCACTGGGATGGATTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000555343.2
ENST00000642676.1
ENST00000644587.1
ENST00000645035.1
ENST00000645337.1
ENST00000649901.1
CDS-3UTR CCA 90 bp ACCTGTAATCCATCCCAGTGCTTTGTGAAGCTGTGGTGGGAAGATCACTTGAGGTGCTTTGTGAAGCTGTaGTGGGAAGATCACTTGAGG +
Preference number: 4 (lower is better)
Translates to: TCNPSQCFVKLWWEDHLRCFVKL*WEDHLR
Trigger: CCTCAAGTGATCTTCCCACCACAGCTTCACAAAGCA...CCTCAAGTGATCTTCCCACCACAGCTTCACAAAGCACTGGGATGGATTACAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000555343.2
ENST00000642676.1
ENST00000645035.1
ENST00000645337.1
ENST00000649901.1
CDS-3UTR TCA 90 bp CAAGTGACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCGAAAGAGGTCGACTCTaGGATTCTGTAGAACAGGAT +
Preference number: 4 (lower is better)
Translates to: QVTEGFSSVNFGGRQECSERGRL*DSVEQD
Trigger: ATCCTGTTCTACAGAATCTCAGAGTCGACCTCTTTC...GGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGTCACTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp TGTAATCCATCCCAGTGCTTTGTGAAGCTGTGGTGGGAAGATCACTTGAGGCCAGAAAGAGGTCGACTCTaGGATTCTGTAGAACAGGAT +
Preference number: 4 (lower is better)
Translates to: CNPSQCFVKLWWEDHLRPERGRL*DSVEQD
Trigger: ATCCTGTTCTACAGAATCTCAGAGTCGACCTCTTTC...TGGCCTCAAGTGATCTTCCCACCACAGCTTCACAAAGCACTGGGATGGATTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644587.1
CDS-3UTR TCA 90 bp CTGGCATTTCTACTTAGTTCAGGTAGGTTAACTCCCTTGGTGGAGAATGCAACCTTGTTTGTTCGCCTGTaGGGAAGCTCTGTAGCTGTC +
Preference number: 4 (lower is better)
Translates to: LAFLLSSGRLTPLVENATLFVRL*GSSVAV
Trigger: GACAGCTACAGAGCTTCCTCACAGGCGAACAAACAA...GGTTGCATTCTCCACCAAGGGAGTTAACCTACCTGAACTAAGTAGAAATGCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp AACTCTGTAATAAGTCGAAATACAAGATATAAGGCAGGAAACAAGGCAAGGGAAGCAGCCCGAGAACCCTaGTGCAGATTCCACGTGGGC +
Preference number: 4 (lower is better)
Translates to: NSVISRNTRYKAGNKAREAAREP*CRFHVG
Trigger: GCCCACGTGGAATCTGCATCAGGGTTCTCGGGCTGC...TTCCCTTGCCTTGTTTCCTGCCTTATATCTTGTATTTCGACTTATTACAGAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000651418.1
CDS-3UTR TCA 90 bp CTTGGTGGAGAATGCAACCTTCTTGCTTCAGTTTCAAGTCCCTCTGGGAGTCAGCTGACTTGCATCTCATaGGTAAATTCACCATCAGCC +
Preference number: 4 (lower is better)
Translates to: LGGECNLLASVSSPSGSQLTCIS*VNSPSA
Trigger: GGCTGATGGTGAATTTACTCATGAGATGCAAGTCAG...CTGACTCCCAGAGGGACTTGAAACTGAAGCAAGAAGGTTGCATTCTCCACCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp CCGGTCTTTGGTAAACAGACGCTTAAGTTGACAACTTGGACTTGGCCAATACTGACGCTGTATACGCACTaGTTCTCCTGGGACACACAA +
Preference number: 4 (lower is better)
Translates to: PVFGKQTLKLTTWTWPILTLYTH*FSWDTQ
Trigger: TTGTGTGTCCCAGGAGAATCAGTGCGTATACAGCGT...CAGTATTGGCCAAGTCCAAGTTGTCAACTTAAGCGTCTGTTTACCAAAGACCGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR TCA 90 bp CAGACGCTTAAGTTGACAACTTGGACTTGGCCAATACTGCATTCTAAATCACCAGTGTTACGAAAGGACTaGCGATCTTCAAGCCGGGGC +
Preference number: 4 (lower is better)
Translates to: QTLKLTTWTWPILHSKSPVLRKD*RSSSRG
Trigger: GCCCCGGCTTGAAGATCGTCAGTCCTTTCGTAACAC...TGGTGATTTAGAATGCAGTATTGGCCAAGTCCAAGTTGTCAACTTAAGCGTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR TCA 90 bp AGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTAAACTGTGGCTTTTCGGTGTaGACACTTTCAATTGTGTTA +
Preference number: 4 (lower is better)
Translates to: REEEDWTCLGPCSRSLVNCGFSV*TLSIVL
Trigger: TAACACAATTGAAAGTGTTCACACCGAAAAGCCACA...GTTTACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR TCA 90 bp AGTGGAAGACTGGCATTTCTACTTAGTTCAGGTAGGTTAACTCCCTTGGTGGAGGGGTGGTTTGATACGTaGAAGTTGAATCCGGATGGG +
Preference number: 4 (lower is better)
Translates to: SGRLAFLLSSGRLTPLVEGWFDT*KLNPDG
Trigger: CCCATCCGGATTCAACTTTCACGTATCAAACCACCC...CTCCACCAAGGGAGTTAACCTACCTGAACTAAGTAGAAATGCCAGTCTTCCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp CCGGTCTTTGGTAAACAGACGCTTAAGTTGACAACTTGGACTTGGCCAATACTGCCACCCAGGGTGGTTTaGTACGTGAAAGTTGAATCC +
Preference number: 4 (lower is better)
Translates to: PVFGKQTLKLTTWTWPILPPRVV*YVKVES
Trigger: GGATTCAACTTTCACGTATCAAACCACCCTGGGTGG...CAGTATTGGCCAAGTCCAAGTTGTCAACTTAAGCGTCTGTTTACCAAAGACCGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR TCA 90 bp AGTTCAGGTAGGTTAACTCCCTTGGTGGAGAATGCAACCTTCTTGCTTCAGTTTACATCCGGATGCAACTaGGGCTGCTCCACTAATCTC +
Preference number: 4 (lower is better)
Translates to: SSGRLTPLVENATFLLQFTSGCN*GCSTNL
Trigger: GAGATTAGTGGAGCAGCCTCAGTTGCATCCGGATGT...AAACTGAAGCAAGAAGGTTGCATTCTCCACCAAGGGAGTTAACCTACCTGAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp CATGGCTTTGTTTCTTCCCAAACCTGCCTGATGTCAAAAGTACGTCAAAAGGAGCAGGCAATCAGTCGGTaGGGATTCAGGTGTGGAACT +
Preference number: 4 (lower is better)
Translates to: HGFVSSQTCLMSKVRQKEQAISR*GFRCGT
Trigger: AGTTCCACACCTGAATCCTCACCGACTGATTGCCTG...CTCCTTTTGACGTACTTTTGACATCAGGCAGGTTTGGGAAGAAACAAAGCCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp AGTTCAGGTAGGTTAACTCCCTTGGTGGAGAATGCAACCTTCTTGCTTCAGTTTTGGCACAGTCCAGAGTaGAGTAAGGCTGTCAAGAGG +
Preference number: 4 (lower is better)
Translates to: SSGRLTPLVENATFLLQFWHSPE*SKAVKR
Trigger: CCTCTTGACAGCCTTACTTCACTCTGGACTGTGCCA...AAACTGAAGCAAGAAGGTTGCATTCTCCACCAAGGGAGTTAACCTACCTGAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp CAGACGCTTAAGTTGACAACTTGGACTTGGCCAATACTGCATTCTAAATCACCACACTGCTGTCCTCCGTaGGGTGACCTTCAAAGTCAG +
Preference number: 4 (lower is better)
Translates to: QTLKLTTWTWPILHSKSPHCCPP*GDLQSQ
Trigger: CTGACTTTGAAGGTCACCTCACGGAGGACAGCAGTG...TGGTGATTTAGAATGCAGTATTGGCCAAGTCCAAGTTGTCAACTTAAGCGTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp CATGGCTTTGTTTCTTCCCAAACCTGCCTGATGTCAAAAGTACGTCAAAAGGAGAGAAGGGCAAGTCCATaGCAAAGGGCATCCCTTCCA +
Preference number: 4 (lower is better)
Translates to: HGFVSSQTCLMSKVRQKERRASP*QRASLP
Trigger: TGGAAGGGATGCCCTTTGTCATGGACTTGCCCTTCT...CTCCTTTTGACGTACTTTTGACATCAGGCAGGTTTGGGAAGAAACAAAGCCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp CTGGCATTTCTACTTAGTTCAGGTAGGTTAACTCCCTTGGTGGAGAATGCAACCCCGTGCTGCTGTCAGTaGACATTTGCAAGGAAAGTG +
Preference number: 4 (lower is better)
Translates to: LAFLLSSGRLTPLVENATPCCCQ*TFARKV
Trigger: CACTTTCCTTGCAAATGTTCACTGACAGCAGCACGG...GGTTGCATTCTCCACCAAGGGAGTTAACCTACCTGAACTAAGTAGAAATGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp TCAATCATTTCACCCTCACGTCGAGCAGCACAGCACTCAGTGGCTCTGACAACAATTCAAGGTTCCAAATaGTCCTGTGGGTTAGTGGAT +
Preference number: 4 (lower is better)
Translates to: SIISPSRRAAQHSVALTTIQGSK*SCGLVD
Trigger: ATCCACTAACCCACAGGATCATTTGGAACCTTGAAT...TGTTGTCAGAGCCACTGAGTGCTGTGCTGCTCGACGTGAGGGTGAAATGATTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp GCAAGAACCCTCAACTCTGTAATAAGTCGAAATACAAGATATAAGGCAGGAAACTGCTGTGACAGGTGGTaGCCCTGGAGCCAGATCTGG +
Preference number: 4 (lower is better)
Translates to: ARTLNSVISRNTRYKAGNCCDRW*PWSQIW
Trigger: CCAGATCTGGCTCCAGGGTCACCACCTGTCACAGCA...GTTTCCTGCCTTATATCTTGTATTTCGACTTATTACAGAGTTGAGGGTTCTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR TCA 90 bp CAAGTGACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCAACAGACGCTTAAGTTaGCAACTTGGACTTGGCCAA +
Preference number: 4 (lower is better)
Translates to: QVTEGFSSVNFGGRQECSNRRLS*QLGLGQ
Trigger: TTGGCCAAGTCCAAGTTGTCAACTTAAGCGTCTGTT...GGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGTCACTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp ACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCTGCCTAAACAGACGCTTAAGTTaGCAACTTGGACTTGGCCAA +
Preference number: 4 (lower is better)
Translates to: TEGFSSVNFGGRQECSCLNRRLS*QLGLGQ
Trigger: TTGGCCAAGTCCAAGTTGTCAACTTAAGCGTCTGTT...TAGGCAGGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp AAAAGTACGTCAAAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGGTATTAACAGACGCTTAAGTTaGCAACTTGGACTTGGCCAA +
Preference number: 4 (lower is better)
Translates to: KSTSKGASQSQESMVPGINRRLS*QLGLGQ
Trigger: TTGGCCAAGTCCAAGTTGTCAACTTAAGCGTCTGTT...AATACCTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTTTGACGTACTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR TCA 90 bp CACATCTCAGACACAAGCTGTAGACTAACAGACCACTCCCAAGCTTACAGCAGGTTGCTAAATCCTCAGTaGACAACGTCTCCCAACAGA +
Preference number: 4 (lower is better)
Translates to: HISDTSCRLTDHSQAYSRLLNPQ*TTSPNR
Trigger: TCTGTTGGGAGACGTTGTTCACTGAGGATTTAGCAA...CCTGCTGTAAGCTTGGGAGTGGTCTGTTAGTCTACAGCTTGTGTCTGAGATGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375689.5
CDS-3UTR TCA 90 bp TGTAATCCATCCCAGTGCTTTGTGAAGCTGTGGTGGGAAGATCACTTGAGGCCATTGCTAAATCCTCAGTaGACAACGTCTCCCAACAGA +
Preference number: 4 (lower is better)
Translates to: CNPSQCFVKLWWEDHLRPLLNPQ*TTSPNR
Trigger: TCTGTTGGGAGACGTTGTTCACTGAGGATTTAGCAA...TGGCCTCAAGTGATCTTCCCACCACAGCTTCACAAAGCACTGGGATGGATTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649901.1
CDS-3UTR GCA 90 bp AGATCAGTGTCAAACTGTACCCTTGAGTGTCCCCAAAGGTTCCAGCAGAGGGAATCTGCCTCTATGACCTaGAGAATCTGTTTTGGTGTC +
Preference number: 4 (lower is better)
Translates to: RSVSNCTLECPQRFQQRESASMT*RICFGV
Trigger: GACACCAAAACAGATTCTGCAGGTCATAGAGGCAGA...TTCCCTCTGCTGGAACCTTTGGGGACACTCAAGGGTACAGTTTGACACTGATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR GCA 90 bp TGTAATCCATCCCAGTGCTTTGTGAAGCTGTGGTGGGAAGATCACTTGAGGCCATCTGCCTCTATGACCTaGAGAATCTGTTTTGGTGTC +
Preference number: 4 (lower is better)
Translates to: CNPSQCFVKLWWEDHLRPSASMT*RICFGV
Trigger: GACACCAAAACAGATTCTGCAGGTCATAGAGGCAGA...TGGCCTCAAGTGATCTTCCCACCACAGCTTCACAAAGCACTGGGATGGATTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000555343.2
ENST00000642676.1
ENST00000644587.1
ENST00000645035.1
ENST00000645337.1
ENST00000649901.1
CDS-3UTR GCA 90 bp AGTGGAAGACTGGCATTTCTACTTAGTTCAGGTAGGTTAACTCCCTTGGTGGAGTGGCCCACGTTCTGCTaGAATGACTCTTCTTTGGTC +
Preference number: 4 (lower is better)
Translates to: SGRLAFLLSSGRLTPLVEWPTFC*NDSSLV
Trigger: GACCAAAGAAGAGTCATTGCAGCAGAACGTGGGCCA...CTCCACCAAGGGAGTTAACCTACCTGAACTAAGTAGAAATGCCAGTCTTCCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp ATTAGGAAGAGACGTTCATGTTCTCTGTACAATACATCCATTTACAGAATCAGCCTCCAGGTCGGGTGCTaGAGAGGATGTGCCTGGCAG +
Preference number: 4 (lower is better)
Translates to: IRKRRSCSLYNTSIYRISLQVGC*RGCAWQ
Trigger: CTGCCAGGCACATCCTCTGCAGCACCCGACCTGGAG...GCTGATTCTGTAAATGGATGTATTGTACAGAGAACATGAACGTCTCTTCCTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp AACTCTGTAATAAGTCGAAATACAAGATATAAGGCAGGAAACAAGGCAAGGGAAACCCTCCAGGTCGGGTaGTGCAGAGGATGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: NSVISRNTRYKAGNKARETLQVG*CRGCAW
Trigger: CCAGGCACATCCTCTGCAGCACCCGACCTGGAGGGT...TTCCCTTGCCTTGTTTCCTGCCTTATATCTTGTATTTCGACTTATTACAGAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR GCA 90 bp AACTCTGTAATAAGTCGAAATACAAGATATAAGGCAGGAAACAAGGCAAGGGAATACACTTTCCAGGGGTaGTCGGGCCTCCCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: NSVISRNTRYKAGNKAREYTFQG*SGLPWA
Trigger: AGCCCAGGGGAGGCCCGAGCACCCCTGGAAAGTGTA...TTCCCTTGCCTTGTTTCCTGCCTTATATCTTGTATTTCGACTTATTACAGAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp TTTGTTTCTTCCCAAACCTGCCTGATGTCAAAAGTACGTCAAAAGGAGCCTCACGACAGTAACTGCCATTaGTGTCACTGCCTCCTCGAG +
Preference number: 4 (lower is better)
Translates to: FVSSQTCLMSKVRQKEPHDSNCH*CHCLLE
Trigger: CTCGAGGAGGCAGTGACAGCAATGGCAGTTACTGTC...GTGAGGCTCCTTTTGACGTACTTTTGACATCAGGCAGGTTTGGGAAGAAACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GGGGGTAGTGGAAGACTGGCATTTCTACTTAGTTCAGGTAGGTTAACTCCCTTGTTAAAGAACTGGGGCTaGTTCCATCAACCATGCCAC +
Preference number: 4 (lower is better)
Translates to: GGSGRLAFLLSSGRLTPLLKNWG*FHQPCH
Trigger: GTGGCATGGTTGATGGAAGCAGCCCCAGTTCTTTAA...CAAGGGAGTTAACCTACCTGAACTAAGTAGAAATGCCAGTCTTCCACTACCCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp AGTGGAAGACTGGCATTTCTACTTAGTTCAGGTAGGTTAACTCCCTTGGTGGAGTCCTGGCAAGACCAGTaGCTGTTTCACAGCTATCTG +
Preference number: 4 (lower is better)
Translates to: SGRLAFLLSSGRLTPLVESWQDQ*LFHSYL
Trigger: CAGATAGCTGTGAAACAGGCACTGGTCTTGCCAGGA...CTCCACCAAGGGAGTTAACCTACCTGAACTAAGTAGAAATGCCAGTCTTCCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp ACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCTGCCTAGTCAAAACTTGGGACTaGCTTGCAATTCTTTTGGGG +
Preference number: 4 (lower is better)
Translates to: TEGFSSVNFGGRQECSCLVKTWD*LAILLG
Trigger: CCCCAAAAGAATTGCAAGGCAGTCCCAAGTTTTGAC...TAGGCAGGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp CCGGTCTTTGGTAAACAGACGCTTAAGTTGACAACTTGGACTTGGCCAATACTGAGTTCCAGGGGACTATaGCCAGTAGCTTTCCTGTTC +
Preference number: 4 (lower is better)
Translates to: PVFGKQTLKLTTWTWPILSSRGL*PVAFLF
Trigger: GAACAGGAAAGCTACTGGGCATAGTCCCCTGGAACT...CAGTATTGGCCAAGTCCAAGTTGTCAACTTAAGCGTCTGTTTACCAAAGACCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp AATCACCACATCATTCCCAACTTGTCACTCATGCTTCAGATGACGAAAATGCCAGCTTTGTGGCTCAGCTaGACCACACTTCCAGCAAGG +
Preference number: 4 (lower is better)
Translates to: NHHIIPNLSLMLQMTKMPALWLS*TTLPAR
Trigger: CCTTGCTGGAAGTGTGGTGCAGCTGAGCCACAAAGC...TGGCATTTTCGTCATCTGAAGCATGAGTGACAAGTTGGGAATGATGTGGTGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp TGTAGGAGGAGAGATGTGAAAAGCAAGATGCGTTTGCTCGGTGGCATGTGGGCAAGAATGCAACCTTCTTaGTTCAGTTTCAAGTCCCTC +
Preference number: 4 (lower is better)
Translates to: CRRRDVKSKMRLLGGMWARMQPS*FSFKSL
Trigger: GAGGGACTTGAAACTGAAGCAAGAAGGTTGCATTCT...TGCCCACATGCCACCGAGCAAACGCATCTTGCTTTTCACATCTCTCCTCCTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp TGTAGGAGGAGAGATGTGAAAAGCAAGATGCGTTTGCTCGGTGGCATGTGGGCAGTTTCTTCCCAAACCTaGCTGATGTCAAAAGTACGT +
Preference number: 4 (lower is better)
Translates to: CRRRDVKSKMRLLGGMWAVSSQT*LMSKVR
Trigger: ACGTACTTTTGACATCAGGCAGGTTTGGGAAGAAAC...TGCCCACATGCCACCGAGCAAACGCATCTTGCTTTTCACATCTCTCCTCCTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp CACATCTCAGACACAAGCTGTAGACTAACAGACCACTCCCAAGCTTACAGCAGGCTGCAGAATCTGTTTTaGTGTCATTGGAGCATCCGA +
Preference number: 4 (lower is better)
Translates to: HISDTSCRLTDHSQAYSRLQNLF*CHWSIR
Trigger: TCGGATGCTCCAATGACACCAAAACAGATTCTGCAG...CCTGCTGTAAGCTTGGGAGTGGTCTGTTAGTCTACAGCTTGTGTCTGAGATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375689.5
ENST00000542461.5
ENST00000646367.1
CDS-3UTR CCA 90 bp TGTAATCCATCCCAGTGCTTTGTGAAGCTGTGGTGGGAAGATCACTTGAGGCCACTGCAGAATCTGTTTTaGTGTCATTGGAGCATCCGA +
Preference number: 4 (lower is better)
Translates to: CNPSQCFVKLWWEDHLRPLQNLF*CHWSIR
Trigger: TCGGATGCTCCAATGACACCAAAACAGATTCTGCAG...TGGCCTCAAGTGATCTTCCCACCACAGCTTCACAAAGCACTGGGATGGATTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000555343.2
ENST00000642676.1
ENST00000644587.1
ENST00000645035.1
ENST00000645337.1
ENST00000649901.1
CDS-3UTR CCA 90 bp ACCTGTAATCCATCCCAGTGCTTTGTGAAGCTGTGGTGGGAAGATCACTTGAGGCTGCAGAATCTGTTTTaGTGTCATTGGAGCATCCGA +
Preference number: 4 (lower is better)
Translates to: TCNPSQCFVKLWWEDHLRLQNLF*CHWSIR
Trigger: TCGGATGCTCCAATGACACCAAAACAGATTCTGCAG...CCTCAAGTGATCTTCCCACCACAGCTTCACAAAGCACTGGGATGGATTACAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000555343.2
ENST00000642676.1
ENST00000645035.1
ENST00000645337.1
ENST00000649901.1
CDS-3UTR CCA 90 bp AGATCAGTGTCAAACTGTACCCTTGAGTGTCCCCAAAGGTTCCAGCAGAGGGAACTGCAGAATCTGTTTTaGTGTCATTGGAGCATCCGA +
Preference number: 4 (lower is better)
Translates to: RSVSNCTLECPQRFQQRELQNLF*CHWSIR
Trigger: TCGGATGCTCCAATGACACCAAAACAGATTCTGCAG...TTCCCTCTGCTGGAACCTTTGGGGACACTCAAGGGTACAGTTTGACACTGATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp AGTTCAGGTAGGTTAACTCCCTTGGTGGAGAATGCAACCTTCTTGCTTCAGTTTGATGCAGATTCCACGTaGGCCCCGTTTACCTTCAGA +
Preference number: 4 (lower is better)
Translates to: SSGRLTPLVENATFLLQFDADST*APFTFR
Trigger: TCTGAAGGTAAACGGGGCCCACGTGGAATCTGCATC...AAACTGAAGCAAGAAGGTTGCATTCTCCACCAAGGGAGTTAACCTACCTGAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp AATCACCACATCATTCCCAACTTGTCACTCATGCTTCAGATGACGAAAATGCCACATTTGACCTGTGGCTaGCTTCCGGAAGCCTCTCAG +
Preference number: 4 (lower is better)
Translates to: NHHIIPNLSLMLQMTKMPHLTCG*LPEASQ
Trigger: CTGAGAGGCTTCCGGAAGCCAGCCACAGGTCAAATG...TGGCATTTTCGTCATCTGAAGCATGAGTGACAAGTTGGGAATGATGTGGTGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000651418.1
CDS-3UTR CCA 90 bp ACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCTGCCTAGCAATGACTCTTCTTTaGTCAAACCCAGCTTCTGTC +
Preference number: 4 (lower is better)
Translates to: TEGFSSVNFGGRQECSCLAMTLL*SNPASV
Trigger: GACAGAAGCTGGGTTTGACCAAAGAAGAGTCATTGC...TAGGCAGGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp AAAAGTACGTCAAAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGGTATTGCAATGACTCTTCTTTaGTCAAACCCAGCTTCTGTC +
Preference number: 4 (lower is better)
Translates to: KSTSKGASQSQESMVPGIAMTLL*SNPASV
Trigger: GACAGAAGCTGGGTTTGACCAAAGAAGAGTCATTGC...AATACCTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTTTGACGTACTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp AATCACCACATCATTCCCAACTTGTCACTCATGCTTCAGATGACGAAAATGCCAGATTCCTTCTGGCTCTaGTTCGGAGATCTGGCCGAG +
Preference number: 4 (lower is better)
Translates to: NHHIIPNLSLMLQMTKMPDSFWL*FGDLAE
Trigger: CTCGGCCAGATCTCCGAACCAGAGCCAGAAGGAATC...TGGCATTTTCGTCATCTGAAGCATGAGTGACAAGTTGGGAATGATGTGGTGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp ACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCTGCCTATCCTCTTCTGATCCTTaGGTTCCTGATCCACAGTTT +
Preference number: 4 (lower is better)
Translates to: TEGFSSVNFGGRQECSCLSSSDP*VPDPQF
Trigger: AAACTGTGGATCAGGAACCCAAGGATCAGAAGAGGA...TAGGCAGGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp AGATCAGTGTCAAACTGTACCCTTGAGTGTCCCCAAAGGTTCCAGCAGAGGGAATCCTCTTCTGATCCTTaGGTTCCTGATCCACAGTTT +
Preference number: 4 (lower is better)
Translates to: RSVSNCTLECPQRFQQRESSSDP*VPDPQF
Trigger: AAACTGTGGATCAGGAACCCAAGGATCAGAAGAGGA...TTCCCTCTGCTGGAACCTTTGGGGACACTCAAGGGTACAGTTTGACACTGATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp GGGGGTAGTGGAAGACTGGCATTTCTACTTAGTTCAGGTAGGTTAACTCCCTTGCTCTTTAGTGGGCTGTaGCTTTTCGGTGTGAACACT +
Preference number: 4 (lower is better)
Translates to: GGSGRLAFLLSSGRLTPLLFSGL*LFGVNT
Trigger: AGTGTTCACACCGAAAAGCCACAGCCCACTAAAGAG...CAAGGGAGTTAACCTACCTGAACTAAGTAGAAATGCCAGTCTTCCACTACCCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp TGTAGGAGGAGAGATGTGAAAAGCAAGATGCGTTTGCTCGGTGGCATGTGGGCATACCTCATCATTCGATaGGATGGGTATCCAATGCAA +
Preference number: 4 (lower is better)
Translates to: CRRRDVKSKMRLLGGMWAYLIIR*DGYPMQ
Trigger: TTGCATTGGATACCCATCCCATCGAATGATGAGGTA...TGCCCACATGCCACCGAGCAAACGCATCTTGCTTTTCACATCTCTCCTCCTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp AACAAGGCAAGGGAAAACACACACAGGGGCATCTACTTGCTGGAAACATGTTGGCTGGGGCTCAACAGATaGTATGTGTTCTCTGGATTC +
Preference number: 4 (lower is better)
Translates to: NKARENTHRGIYLLETCWLGLNR*YVFSGF
Trigger: GAATCCAGAGAACACATACCATCTGTTGAGCCCCAG...CCAACATGTTTCCAGCAAGTAGATGCCCCTGTGTGTGTTTTCCCTTGCCTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp AGTGGAAGACTGGCATTTCTACTTAGTTCAGGTAGGTTAACTCCCTTGGTGGAGGAATCTGGGATCTTTTaGCGGACCGCACATACTCGA +
Preference number: 4 (lower is better)
Translates to: SGRLAFLLSSGRLTPLVEESGIF*RTAHTR
Trigger: TCGAGTATGTGCGGTCCGCCAAAAGATCCCAGATTC...CTCCACCAAGGGAGTTAACCTACCTGAACTAAGTAGAAATGCCAGTCTTCCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GGGGGTAGTGGAAGACTGGCATTTCTACTTAGTTCAGGTAGGTTAACTCCCTTGATGCGTAGCGAGCCATaGCTCTGGTCTTTTGTAAGT +
Preference number: 4 (lower is better)
Translates to: GGSGRLAFLLSSGRLTPLMRSEP*LWSFVS
Trigger: ACTTACAAAAGACCAGAGCCATGGCTCGCTACGCAT...CAAGGGAGTTAACCTACCTGAACTAAGTAGAAATGCCAGTCTTCCACTACCCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp AAAAGTACGTCAAAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGGTATTTGTTTCACAGCTATCTaGCAGAAGAGGCTCCTTCAA +
Preference number: 4 (lower is better)
Translates to: KSTSKGASQSQESMVPGICFTAI*QKRLLQ
Trigger: TTGAAGGAGCCTCTTCTGCCAGATAGCTGTGAAACA...AATACCTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTTTGACGTACTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp AGATCAGTGTCAAACTGTACCCTTGAGTGTCCCCAAAGGTTCCAGCAGAGGGAAGAGGGAGTCAAAACTTaGGACTGCCTTGCAATTCTT +
Preference number: 4 (lower is better)
Translates to: RSVSNCTLECPQRFQQREEGVKT*DCLAIL
Trigger: AAGAATTGCAAGGCAGTCCCAAGTTTTGACTCCCTC...TTCCCTCTGCTGGAACCTTTGGGGACACTCAAGGGTACAGTTTGACACTGATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp TGTAGGAGGAGAGATGTGAAAAGCAAGATGCGTTTGCTCGGTGGCATGTGGGCAAATGGGATTTGTCACTaGATGGAGGGAGTCAAAACT +
Preference number: 4 (lower is better)
Translates to: CRRRDVKSKMRLLGGMWANGICH*MEGVKT
Trigger: AGTTTTGACTCCCTCCATCCAGTGACAAATCCCATT...TGCCCACATGCCACCGAGCAAACGCATCTTGCTTTTCACATCTCTCCTCCTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GAGAATGCAACCTTCTTGCTTCAGTTTCAAGTCCCTCTGGGAGTCAGGCAGTCCAATGGGATTTGTCACTaGATGGAGGGAGTCAAAACT +
Preference number: 4 (lower is better)
Translates to: ENATFLLQFQVPLGVRQSNGICH*MEGVKT
Trigger: AGTTTTGACTCCCTCCATCCAGTGACAAATCCCATT...GGACTGCCTGACTCCCAGAGGGACTTGAAACTGAAGCAAGAAGGTTGCATTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CTGGCATTTCTACTTAGTTCAGGTAGGTTAACTCCCTTGGTGGAGAATGCAACCGTCCCAACTTCCCACTaGGAAAAACTGGAGGGATCT +
Preference number: 4 (lower is better)
Translates to: LAFLLSSGRLTPLVENATVPTSH*EKLEGS
Trigger: AGATCCCTCCAGTTTTTCCCAGTGGGAAGTTGGGAC...GGTTGCATTCTCCACCAAGGGAGTTAACCTACCTGAACTAAGTAGAAATGCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp TTTGTTTCTTCCCAAACCTGCCTGATGTCAAAAGTACGTCAAAAGGAGCCTCACGTACCCCACCAGACATaGAGTTTGTGCTTGGTCCCA +
Preference number: 4 (lower is better)
Translates to: FVSSQTCLMSKVRQKEPHVPHQT*SLCLVP
Trigger: TGGGACCAAGCACAAACTCCATGTCTGGTGGGGTAC...GTGAGGCTCCTTTTGACGTACTTTTGACATCAGGCAGGTTTGGGAAGAAACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp TTTGTTTCTTCCCAAACCTGCCTGATGTCAAAAGTACGTCAAAAGGAGCCTCACAAAGGCATGTGGCTTTaGAGCCCAGTCTTCCCTTGG +
Preference number: 4 (lower is better)
Translates to: FVSSQTCLMSKVRQKEPHKGMWL*SPVFPW
Trigger: CCAAGGGAAGACTGGGCTCCAAAGCCACATGCCTTT...GTGAGGCTCCTTTTGACGTACTTTTGACATCAGGCAGGTTTGGGAAGAAACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp TTTGTTTCTTCCCAAACCTGCCTGATGTCAAAAGTACGTCAAAAGGAGCCTCACGCCAACAAAGGCATGTaGCTTTGGAGCCCAGTCTTC +
Preference number: 4 (lower is better)
Translates to: FVSSQTCLMSKVRQKEPHANKGM*LWSPVF
Trigger: GAAGACTGGGCTCCAAAGCCACATGCCTTTGTTGGC...GTGAGGCTCCTTTTGACGTACTTTTGACATCAGGCAGGTTTGGGAAGAAACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CCGGTCTTTGGTAAACAGACGCTTAAGTTGACAACTTGGACTTGGCCAATACTGTGCTGGCTTCTTTCCTaGCCATCAACTCCCCAAAGT +
Preference number: 4 (lower is better)
Translates to: PVFGKQTLKLTTWTWPILCWLLS*PSTPQS
Trigger: ACTTTGGGGAGTTGATGGCCAGGAAAGAAGCCAGCA...CAGTATTGGCCAAGTCCAAGTTGTCAACTTAAGCGTCTGTTTACCAAAGACCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp AATCACCACATCATTCCCAACTTGTCACTCATGCTTCAGATGACGAAAATGCCAGGGCATCGGGCAACCTaGCAGGTCACAAGTCAATCA +
Preference number: 4 (lower is better)
Translates to: NHHIIPNLSLMLQMTKMPGHRAT*QVTSQS
Trigger: TGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCC...TGGCATTTTCGTCATCTGAAGCATGAGTGACAAGTTGGGAATGATGTGGTGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp AGTGGAAGACTGGCATTTCTACTTAGTTCAGGTAGGTTAACTCCCTTGGTGGAGGGGGCATCTACTTGCTaGAAACATGTTGGGAGAGAG +
Preference number: 4 (lower is better)
Translates to: SGRLAFLLSSGRLTPLVEGASTC*KHVGRE
Trigger: CTCTCTCCCAACATGTTTCCAGCAAGTAGATGCCCC...CTCCACCAAGGGAGTTAACCTACCTGAACTAAGTAGAAATGCCAGTCTTCCACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CAGAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTATTGACAACTTGGACTTaGCCAATACTGCATTCTAAA +
Preference number: 4 (lower is better)
Translates to: QREEEDWTCLGPCSRSLVLTTWT*PILHSK
Trigger: TTTAGAATGCAGTATTGGCCAAGTCCAAGTTGTCAA...TACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp GAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTAAACTTAAGTTGACAACTTaGACTTGGCCAATACTGCAT +
Preference number: 4 (lower is better)
Translates to: EGRRGLDMFGPLFPVFGKLKLTT*TWPILH
Trigger: ATGCAGTATTGGCCAAGTCCAAGTTGTCAACTTAAG...TTTACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp TTTGTTTCTTCCCAAACCTGCCTGATGTCAAAAGTACGTCAAAAGGAGCCTCACCTCTGGGCAGCCTCATaGACCAGATCAGTGTCAAAC +
Preference number: 4 (lower is better)
Translates to: FVSSQTCLMSKVRQKEPHLWAAS*TRSVSN
Trigger: GTTTGACACTGATCTGGTCCATGAGGCTGCCCAGAG...GTGAGGCTCCTTTTGACGTACTTTTGACATCAGGCAGGTTTGGGAAGAAACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp AGTTCAGGTAGGTTAACTCCCTTGGTGGAGAATGCAACCTTCTTGCTTCAGTTTAAGCAGTGCTTTCTCTaGGCAGCCTCATGGACCAGA +
Preference number: 4 (lower is better)
Translates to: SSGRLTPLVENATFLLQFKQCFL*AASWTR
Trigger: TCTGGTCCATGAGGCTGCCCAGAGAAAGCACTGCTT...AAACTGAAGCAAGAAGGTTGCATTCTCCACCAAGGGAGTTAACCTACCTGAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp TTTGTTTCTTCCCAAACCTGCCTGATGTCAAAAGTACGTCAAAAGGAGCCTCACAAGCAGTGCTTTCTCTaGGCAGCCTCATGGACCAGA +
Preference number: 4 (lower is better)
Translates to: FVSSQTCLMSKVRQKEPHKQCFL*AASWTR
Trigger: TCTGGTCCATGAGGCTGCCCAGAGAAAGCACTGCTT...GTGAGGCTCCTTTTGACGTACTTTTGACATCAGGCAGGTTTGGGAAGAAACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp TGTAATCCATCCCAGTGCTTTGTGAAGCTGTGGTGGGAAGATCACTTGAGGCCAGCACCTGGTTTAGATTaGGAAAGCTCAACATGCCAT +
Preference number: 4 (lower is better)
Translates to: CNPSQCFVKLWWEDHLRPAPGLD*ESSTCH
Trigger: ATGGCATGTTGAGCTTTCCCAATCTAAACCAGGTGC...TGGCCTCAAGTGATCTTCCCACCACAGCTTCACAAAGCACTGGGATGGATTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649901.1
CDS-3UTR TCA 90 bp CATGGCTTTGTTTCTTCCCAAACCTGCCTGATGTCAAAAGTACGTCAAAAGGAGGGGTGGTTTGATACGTaGAAGTTGAATCCGGATGGG +
Preference number: 4 (lower is better)
Translates to: HGFVSSQTCLMSKVRQKEGWFDT*KLNPDG
Trigger: CCCATCCGGATTCAACTTTCACGTATCAAACCACCC...CTCCTTTTGACGTACTTTTGACATCAGGCAGGTTTGGGAAGAAACAAAGCCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR TCA 90 bp GGGGGTAGTGGAAGACTGGCATTTCTACTTAGTTCAGGTAGGTTAACTCCCTTGGATCACATTTGGAGATaGGAAACGAGGTGTTCTCGA +
Preference number: 4 (lower is better)
Translates to: GGSGRLAFLLSSGRLTPLDHIWR*ETRCSR
Trigger: TCGAGAACACCTCGTTTCTCATCTCCAAATGTGATC...CAAGGGAGTTAACCTACCTGAACTAAGTAGAAATGCCAGTCTTCCACTACCCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp AACAAGGCAAGGGAAAACACACACAGGGGCATCTACTTGCTGGAAACATGTTGGAAGTCTTCTCATTCTTaGCGCTGCCAACAAAGGCAT +
Preference number: 4 (lower is better)
Translates to: NKARENTHRGIYLLETCWKSSHS*RCQQRH
Trigger: ATGCCTTTGTTGGCAGCGTCAAGAATGAGAAGACTT...CCAACATGTTTCCAGCAAGTAGATGCCCCTGTGTGTGTTTTCCCTTGCCTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp AGTTCAGGTAGGTTAACTCCCTTGGTGGAGAATGCAACCTTCTTGCTTCAGTTTCCGTGCTGCTGTCAGTaGACATTTGCAAGGAAAGTG +
Preference number: 4 (lower is better)
Translates to: SSGRLTPLVENATFLLQFPCCCQ*TFARKV
Trigger: CACTTTCCTTGCAAATGTTCACTGACAGCAGCACGG...AAACTGAAGCAAGAAGGTTGCATTCTCCACCAAGGGAGTTAACCTACCTGAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp AGATCAGTGTCAAACTGTACCCTTGAGTGTCCCCAAAGGTTCCAGCAGAGGGAAATTCAAGGTTCCAAATaGTCCTGTGGGTTAGTGGAT +
Preference number: 4 (lower is better)
Translates to: RSVSNCTLECPQRFQQREIQGSK*SCGLVD
Trigger: ATCCACTAACCCACAGGATCATTTGGAACCTTGAAT...TTCCCTCTGCTGGAACCTTTGGGGACACTCAAGGGTACAGTTTGACACTGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp GAGCACAACGAATATCAGAGAAGTGATGCCTATGGATGTAAAAGGCCAATGAACTTCCAGTCCAGCTTCTaGAGGCAAACAGCCCAGTCT +
Preference number: 4 (lower is better)
Translates to: EHNEYQRSDAYGCKRPMNFQSSF*RQTAQS
Trigger: AGACTGGGCTGTTTGCCTTCAGAAGCTGGACTGGAA...GTTCATTGGCCTTTTACATCCATAGGCATCACTTCTCTGATATTCGTTGTGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375689.5
CDS-3UTR TCA 90 bp TGTAATCCATCCCAGTGCTTTGTGAAGCTGTGGTGGGAAGATCACTTGAGGCCAATTTCTACAAGATCCTaGAAACTAGCCCAAGCTTCC +
Preference number: 4 (lower is better)
Translates to: CNPSQCFVKLWWEDHLRPISTRS*KLAQAS
Trigger: GGAAGCTTGGGCTAGTTTTCAGGATCTTGTAGAAAT...TGGCCTCAAGTGATCTTCCCACCACAGCTTCACAAAGCACTGGGATGGATTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555343.2
CDS-3UTR GCA 90 bp CATGGCTTTGTTTCTTCCCAAACCTGCCTGATGTCAAAAGTACGTCAAAAGGAGAGGAAGAGGAGCTGCTaGTGGAAGTGTGATGGTAAG +
Preference number: 4 (lower is better)
Translates to: HGFVSSQTCLMSKVRQKERKRSC*WKCDGK
Trigger: CTTACCATCACACTTCCAGCAGCAGCTCCTCTTCCT...CTCCTTTTGACGTACTTTTGACATCAGGCAGGTTTGGGAAGAAACAAAGCCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR GCA 90 bp AGTTCAGGTAGGTTAACTCCCTTGGTGGAGAATGCAACCTTCTTGCTTCAGTTTTGGCCCACGTTCTGCTaGAATGACTCTTCTTTGGTC +
Preference number: 4 (lower is better)
Translates to: SSGRLTPLVENATFLLQFWPTFC*NDSSLV
Trigger: GACCAAAGAAGAGTCATTGCAGCAGAACGTGGGCCA...AAACTGAAGCAAGAAGGTTGCATTCTCCACCAAGGGAGTTAACCTACCTGAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp CATGGCTTTGTTTCTTCCCAAACCTGCCTGATGTCAAAAGTACGTCAAAAGGAGGAGCGTTTCTTAAAATaGCCATCTCGCTGTCGGGTG +
Preference number: 4 (lower is better)
Translates to: HGFVSSQTCLMSKVRQKEERFLK*PSRCRV
Trigger: CACCCGACAGCGAGATGGGCATTTTAAGAAACGCTC...CTCCTTTTGACGTACTTTTGACATCAGGCAGGTTTGGGAAGAAACAAAGCCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR GCA 90 bp AGTGGAAGACTGGCATTTCTACTTAGTTCAGGTAGGTTAACTCCCTTGGTGGAGAATTCTGTCTGGAGATaGAGAGGCACGTGCCAAGTT +
Preference number: 4 (lower is better)
Translates to: SGRLAFLLSSGRLTPLVENSVWR*RGTCQV
Trigger: AACTTGGCACGTGCCTCTGCATCTCCAGACAGAATT...CTCCACCAAGGGAGTTAACCTACCTGAACTAAGTAGAAATGCCAGTCTTCCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp AGTTCAGGTAGGTTAACTCCCTTGGTGGAGAATGCAACCTTCTTGCTTCAGTTTCCTGTTGACAGTAACTaGCATTGCTGTCACTGCCTC +
Preference number: 4 (lower is better)
Translates to: SSGRLTPLVENATFLLQFPVDSN*HCCHCL
Trigger: GAGGCAGTGACAGCAATGGCAGTTACTGTCAACAGG...AAACTGAAGCAAGAAGGTTGCATTCTCCACCAAGGGAGTTAACCTACCTGAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp AGATCAGTGTCAAACTGTACCCTTGAGTGTCCCCAAAGGTTCCAGCAGAGGGAAAAGCTTCCCATAAAATaGCTGCTTGATGCTGAGTTG +
Preference number: 4 (lower is better)
Translates to: RSVSNCTLECPQRFQQREKLPIK*LLDAEL
Trigger: CAACTCAGCATCAAGCAGGCATTTTATGGGAAGCTT...TTCCCTCTGCTGGAACCTTTGGGGACACTCAAGGGTACAGTTTGACACTGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GGGGGTAGTGGAAGACTGGCATTTCTACTTAGTTCAGGTAGGTTAACTCCCTTGTCCCTTGGTGGAGAATaGAACCTTCTTGCTTCAGTT +
Preference number: 4 (lower is better)
Translates to: GGSGRLAFLLSSGRLTPLSLGGE*NLLASV
Trigger: AACTGAAGCAAGAAGGTTGCATTCTCCACCAAGGGA...CAAGGGAGTTAACCTACCTGAACTAAGTAGAAATGCCAGTCTTCCACTACCCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp CAAGGCAAGGGAAAACACACACAGGGGCATCTACTTGCTGGAAACATGTTGGGAGTTTCTTCCCAAACCTaGCTGATGTCAAAAGTACGT +
Preference number: 4 (lower is better)
Translates to: QGKGKHTQGHLLAGNMLGVSSQT*LMSKVR
Trigger: ACGTACTTTTGACATCAGGCAGGTTTGGGAAGAAAC...TCCCAACATGTTTCCAGCAAGTAGATGCCCCTGTGTGTGTTTTCCCTTGCCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR GCA 90 bp AGATCAGTGTCAAACTGTACCCTTGAGTGTCCCCAAAGGTTCCAGCAGAGGGAAGGACTTGGCCAATACTaGATTCTAAATCACCACATC +
Preference number: 4 (lower is better)
Translates to: RSVSNCTLECPQRFQQREGLGQY*ILNHHI
Trigger: GATGTGGTGATTTAGAATGCAGTATTGGCCAAGTCC...TTCCCTCTGCTGGAACCTTTGGGGACACTCAAGGGTACAGTTTGACACTGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp CACATCTCAGACACAAGCTGTAGACTAACAGACCACTCCCAAGCTTACAGCAGGCTGTTTTGGTGTCATTaGAGCATCCGAGTAGTTTTC +
Preference number: 4 (lower is better)
Translates to: HISDTSCRLTDHSQAYSRLFWCH*SIRVVF
Trigger: GAAAACTACTCGGATGCTCCAATGACACCAAAACAG...CCTGCTGTAAGCTTGGGAGTGGTCTGTTAGTCTACAGCTTGTGTCTGAGATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375689.5
ENST00000542461.5
ENST00000646367.1
CDS-3UTR CCA 90 bp TGTAATCCATCCCAGTGCTTTGTGAAGCTGTGGTGGGAAGATCACTTGAGGCCACTGTTTTGGTGTCATTaGAGCATCCGAGTAGTTTTC +
Preference number: 4 (lower is better)
Translates to: CNPSQCFVKLWWEDHLRPLFWCH*SIRVVF
Trigger: GAAAACTACTCGGATGCTCCAATGACACCAAAACAG...TGGCCTCAAGTGATCTTCCCACCACAGCTTCACAAAGCACTGGGATGGATTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000555343.2
ENST00000642676.1
ENST00000644587.1
ENST00000645035.1
ENST00000645337.1
ENST00000649901.1
CDS-3UTR CCA 90 bp AACAAGGCAAGGGAAAACACACACAGGGGCATCTACTTGCTGGAAACATGTTGGCTGCAGAATCTGTTTTaGTGTCATTGGAGCATCCGA +
Preference number: 4 (lower is better)
Translates to: NKARENTHRGIYLLETCWLQNLF*CHWSIR
Trigger: TCGGATGCTCCAATGACACCAAAACAGATTCTGCAG...CCAACATGTTTCCAGCAAGTAGATGCCCCTGTGTGTGTTTTCCCTTGCCTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp TTTGTTTCTTCCCAAACCTGCCTGATGTCAAAAGTACGTCAAAAGGAGCCTCACAAGAGGAGCTGCTGCTaGAAGTGTGATGGTAAGGCA +
Preference number: 4 (lower is better)
Translates to: FVSSQTCLMSKVRQKEPHKRSCC*KCDGKA
Trigger: TGCCTTACCATCACACTTCCAGCAGCAGCTCCTCTT...GTGAGGCTCCTTTTGACGTACTTTTGACATCAGGCAGGTTTGGGAAGAAACAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp ATTAGGAAGAGACGTTCATGTTCTCTGTACAATACATCCATTTACAGAATCAGCTCGCTGTCGGGTGGCTaGACCACGCTGTATACGCAC +
Preference number: 4 (lower is better)
Translates to: IRKRRSCSLYNTSIYRISSLSGG*TTLYTH
Trigger: GTGCGTATACAGCGTGGTCCAGCCACCCGACAGCGA...GCTGATTCTGTAAATGGATGTATTGTACAGAGAACATGAACGTCTCTTCCTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp AACTCTGTAATAAGTCGAAATACAAGATATAAGGCAGGAAACAAGGCAAGGGAAACTGCTCAGCCCTGCTaGGTCAGTCTTAGCCTCCCC +
Preference number: 4 (lower is better)
Translates to: NSVISRNTRYKAGNKARETAQPC*VSLSLP
Trigger: GGGGAGGCTAAGACTGACCCAGCAGGGCTGAGCAGT...TTCCCTTGCCTTGTTTCCTGCCTTATATCTTGTATTTCGACTTATTACAGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp AATCACCACATCATTCCCAACTTGTCACTCATGCTTCAGATGACGAAAATGCCAGCTAGGAATTCTGTCTaGAGATGCAGAGGCACGTGC +
Preference number: 4 (lower is better)
Translates to: NHHIIPNLSLMLQMTKMPARNSV*RCRGTC
Trigger: GCACGTGCCTCTGCATCTCCAGACAGAATTCCTAGC...TGGCATTTTCGTCATCTGAAGCATGAGTGACAAGTTGGGAATGATGTGGTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp CCGGTCTTTGGTAAACAGACGCTTAAGTTGACAACTTGGACTTGGCCAATACTGCTCTTTAGTGGGCTGTaGCTTTTCGGTGTGAACACT +
Preference number: 4 (lower is better)
Translates to: PVFGKQTLKLTTWTWPILLFSGL*LFGVNT
Trigger: AGTGTTCACACCGAAAAGCCACAGCCCACTAAAGAG...CAGTATTGGCCAAGTCCAAGTTGTCAACTTAAGCGTCTGTTTACCAAAGACCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp AAAAGTACGTCAAAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGGTATTCATCATTCGATGGGATaGGTATCCAATGCAAAGAAC +
Preference number: 4 (lower is better)
Translates to: KSTSKGASQSQESMVPGIHHSMG*VSNAKN
Trigger: GTTCTTTGCATTGGATACCCATCCCATCGAATGATG...AATACCTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTTTGACGTACTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp AATCACCACATCATTCCCAACTTGTCACTCATGCTTCAGATGACGAAAATGCCACACTCCTCTCCAACCTaGGGCTCAACAGATGGTATG +
Preference number: 4 (lower is better)
Translates to: NHHIIPNLSLMLQMTKMPHSSPT*GSTDGM
Trigger: CATACCATCTGTTGAGCCCCAGGTTGGAGAGGAGTG...TGGCATTTTCGTCATCTGAAGCATGAGTGACAAGTTGGGAATGATGTGGTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CCGGTCTTTGGTAAACAGACGCTTAAGTTGACAACTTGGACTTGGCCAATACTGAGCGAGCCATGGCTCTaGTCTTTTGTAAGTGGTACT +
Preference number: 4 (lower is better)
Translates to: PVFGKQTLKLTTWTWPILSEPWL*SFVSGT
Trigger: AGTACCACTTACAAAAGACCAGAGCCATGGCTCGCT...CAGTATTGGCCAAGTCCAAGTTGTCAACTTAAGCGTCTGTTTACCAAAGACCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CAAGTGACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCAATGGGATTTGTCACTaGATGGAGGGAGTCAAAACT +
Preference number: 4 (lower is better)
Translates to: QVTEGFSSVNFGGRQECSNGICH*MEGVKT
Trigger: AGTTTTGACTCCCTCCATCCAGTGACAAATCCCATT...GGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGTCACTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp AGTTCAGGTAGGTTAACTCCCTTGGTGGAGAATGCAACCTTCTTGCTTCAGTTTCCGACCTGTCTGCTCTaGACCAAAGGAGATCACATT +
Preference number: 4 (lower is better)
Translates to: SSGRLTPLVENATFLLQFPTCLL*TKGDHI
Trigger: AATGTGATCTCCTTTGGTCCAGAGCAGACAGGTCGG...AAACTGAAGCAAGAAGGTTGCATTCTCCACCAAGGGAGTTAACCTACCTGAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp AATCACCACATCATTCCCAACTTGTCACTCATGCTTCAGATGACGAAAATGCCAAAAGGCATGTGGCTTTaGAGCCCAGTCTTCCCTTGG +
Preference number: 4 (lower is better)
Translates to: NHHIIPNLSLMLQMTKMPKGMWL*SPVFPW
Trigger: CCAAGGGAAGACTGGGCTCCAAAGCCACATGCCTTT...TGGCATTTTCGTCATCTGAAGCATGAGTGACAAGTTGGGAATGATGTGGTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp AATCACCACATCATTCCCAACTTGTCACTCATGCTTCAGATGACGAAAATGCCATGCTTGATGCTGAGTTaGGAGGGGAGAGAAGAAGGC +
Preference number: 4 (lower is better)
Translates to: NHHIIPNLSLMLQMTKMPCLMLS*EGREEG
Trigger: GCCTTCTTCTCTCCCCTCCCAACTCAGCATCAAGCA...TGGCATTTTCGTCATCTGAAGCATGAGTGACAAGTTGGGAATGATGTGGTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp AGTGGAAGACTGGCATTTCTACTTAGTTCAGGTAGGTTAACTCCCTTGGTGGAGGAAAGTGATGCACTGTaGCTCGCACCAAAGTTTGCT +
Preference number: 4 (lower is better)
Translates to: SGRLAFLLSSGRLTPLVEESDAL*LAPKFA
Trigger: AGCAAACTTTGGTGCGAGCCACAGTGCATCACTTTC...CTCCACCAAGGGAGTTAACCTACCTGAACTAAGTAGAAATGCCAGTCTTCCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp AACTCTGTAATAAGTCGAAATACAAGATATAAGGCAGGAAACAAGGCAAGGGAAGCACCAGCCCCCTGGTaGGCAATGCCAGGAGTTACT +
Preference number: 4 (lower is better)
Translates to: NSVISRNTRYKAGNKAREAPAPW*AMPGVT
Trigger: AGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGC...TTCCCTTGCCTTGTTTCCTGCCTTATATCTTGTATTTCGACTTATTACAGAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GTGACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCTGCCACAAGGTCTACAGATaGCATTTTCATAGGAAAGAC +
Preference number: 4 (lower is better)
Translates to: VTEGFSSVNFGGRQECSCHKVYR*HFHRKD
Trigger: GTCTTTCCTATGAAAATGCCATCTGTAGACCTTGTG...GCAGGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGTCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GCAAGAACCCTCAACTCTGTAATAAGTCGAAATACAAGATATAAGGCAGGAAACGATGCGTTTGCTCGGTaGCATGTGGGCAGGCTGACT +
Preference number: 4 (lower is better)
Translates to: ARTLNSVISRNTRYKAGNDAFAR*HVGRLT
Trigger: AGTCAGCCTGCCCACATGCCACCGAGCAAACGCATC...GTTTCCTGCCTTATATCTTGTATTTCGACTTATTACAGAGTTGAGGGTTCTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp AGTTCAGGTAGGTTAACTCCCTTGGTGGAGAATGCAACCTTCTTGCTTCAGTTTAGGCAGGAGCAGGCATaGCTTTGTTTCTTCCCAAAC +
Preference number: 4 (lower is better)
Translates to: SSGRLTPLVENATFLLQFRQEQA*LCFFPN
Trigger: GTTTGGGAAGAAACAAAGCCATGCCTGCTCCTGCCT...AAACTGAAGCAAGAAGGTTGCATTCTCCACCAAGGGAGTTAACCTACCTGAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GAGAATGCAACCTTCTTGCTTCAGTTTCAAGTCCCTCTGGGAGTCAGGCAGTCCCTTAAGTTGACAACTTaGACTTGGCCAATACTGCAT +
Preference number: 4 (lower is better)
Translates to: ENATFLLQFQVPLGVRQSLKLTT*TWPILH
Trigger: ATGCAGTATTGGCCAAGTCCAAGTTGTCAACTTAAG...GGACTGCCTGACTCCCAGAGGGACTTGAAACTGAAGCAAGAAGGTTGCATTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp ACAAGCTGTAGACTAACAGACCACTCCCAAGCTTACAGCAGGTTCATACAATGGTACCTGCAAGTCCTCTaGCGCTCTGAACACAAAATT +
Preference number: 4 (lower is better)
Translates to: TSCRLTDHSQAYSRFIQWYLQVL*RSEHKI
Trigger: AATTTTGTGTTCAGAGCGTCAGAGGACTTGCAGGTA...CCATTGTATGAACCTGCTGTAAGCTTGGGAGTGGTCTGTTAGTCTACAGCTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375689.5
CDS-3UTR TCA 90 bp AGTTCAGGTAGGTTAACTCCCTTGGTGGAGAATGCAACCTTCTTGCTTCAGTTTGTCCTTCTGCCTCTATaGCCTGCAGAATCTGTTTTG +
Preference number: 4 (lower is better)
Translates to: SSGRLTPLVENATFLLQFVLLPL*PAESVL
Trigger: CAAAACAGATTCTGCAGGTCATAGAGGCAGAAGGAC...AAACTGAAGCAAGAAGGTTGCATTCTCCACCAAGGGAGTTAACCTACCTGAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp CAGACGCTTAAGTTGACAACTTGGACTTGGCCAATACTGCATTCTAAATCACCAGTAGAGGGGAACATCTaGGGCCACAGATTTTGCATC +
Preference number: 4 (lower is better)
Translates to: QTLKLTTWTWPILHSKSPVEGNI*GHRFCI
Trigger: GATGCAAAATCTGTGGCCTCAGATGTTCCCCTCTAC...TGGTGATTTAGAATGCAGTATTGGCCAAGTCCAAGTTGTCAACTTAAGCGTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR TCA 90 bp CAGACGCTTAAGTTGACAACTTGGACTTGGCCAATACTGCATTCTAAATCACCAGGGTGGTTTGATACGTaGAAGTTGAATCCGGATGGG +
Preference number: 4 (lower is better)
Translates to: QTLKLTTWTWPILHSKSPGWFDT*KLNPDG
Trigger: CCCATCCGGATTCAACTTTCACGTATCAAACCACCC...TGGTGATTTAGAATGCAGTATTGGCCAAGTCCAAGTTGTCAACTTAAGCGTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR TCA 90 bp AGTGGAAGACTGGCATTTCTACTTAGTTCAGGTAGGTTAACTCCCTTGGTGGAGGATCACATTTGGAGATaGGAAACGAGGTGTTCTCGA +
Preference number: 4 (lower is better)
Translates to: SGRLAFLLSSGRLTPLVEDHIWR*ETRCSR
Trigger: TCGAGAACACCTCGTTTCTCATCTCCAAATGTGATC...CTCCACCAAGGGAGTTAACCTACCTGAACTAAGTAGAAATGCCAGTCTTCCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp AGTGGAAGACTGGCATTTCTACTTAGTTCAGGTAGGTTAACTCCCTTGGTGGAGAAGTCTTCTCATTCTTaGCGCTGCCAACAAAGGCAT +
Preference number: 4 (lower is better)
Translates to: SGRLAFLLSSGRLTPLVEKSSHS*RCQQRH
Trigger: ATGCCTTTGTTGGCAGCGTCAAGAATGAGAAGACTT...CTCCACCAAGGGAGTTAACCTACCTGAACTAAGTAGAAATGCCAGTCTTCCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp CAGACGCTTAAGTTGACAACTTGGACTTGGCCAATACTGCATTCTAAATCACCACCGTGCTGCTGTCAGTaGACATTTGCAAGGAAAGTG +
Preference number: 4 (lower is better)
Translates to: QTLKLTTWTWPILHSKSPPCCCQ*TFARKV
Trigger: CACTTTCCTTGCAAATGTTCACTGACAGCAGCACGG...TGGTGATTTAGAATGCAGTATTGGCCAAGTCCAAGTTGTCAACTTAAGCGTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp CAAGGCAAGGGAAAACACACACAGGGGCATCTACTTGCTGGAAACATGTTGGGAGTTAGTGGATCACACTaGGACAGAAAAGTTCCAAAT +
Preference number: 4 (lower is better)
Translates to: QGKGKHTQGHLLAGNMLGVSGSH*DRKVPN
Trigger: ATTTGGAACTTTTCTGTCTCAGTGTGATCCACTAAC...TCCCAACATGTTTCCAGCAAGTAGATGCCCCTGTGTGTGTTTTCCCTTGCCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp AGTGGAAGACTGGCATTTCTACTTAGTTCAGGTAGGTTAACTCCCTTGGTGGAGCACTCATGCTTCAGATaGCGAAAATGCCACATCAGA +
Preference number: 4 (lower is better)
Translates to: SGRLAFLLSSGRLTPLVEHSCFR*RKCHIR
Trigger: TCTGATGTGGCATTTTCGTCATCTGAAGCATGAGTG...CTCCACCAAGGGAGTTAACCTACCTGAACTAAGTAGAAATGCCAGTCTTCCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp CCGGTCTTTGGTAAACAGACGCTTAAGTTGACAACTTGGACTTGGCCAATACTGCACTCATGCTTCAGATaGCGAAAATGCCACATCAGA +
Preference number: 4 (lower is better)
Translates to: PVFGKQTLKLTTWTWPILHSCFR*RKCHIR
Trigger: TCTGATGTGGCATTTTCGTCATCTGAAGCATGAGTG...CAGTATTGGCCAAGTCCAAGTTGTCAACTTAAGCGTCTGTTTACCAAAGACCGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR TCA 90 bp TGTAATCCATCCCAGTGCTTTGTGAAGCTGTGGTGGGAAGATCACTTGAGGCCAGATAGCAAGCACCAATaGAAATTCTGTAGCCCAAAT +
Preference number: 4 (lower is better)
Translates to: CNPSQCFVKLWWEDHLRPDSKHQ*KFCSPN
Trigger: ATTTGGGCTACAGAATTTTCATTGGTGCTTGCTATC...TGGCCTCAAGTGATCTTCCCACCACAGCTTCACAAAGCACTGGGATGGATTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555343.2
CDS-3UTR TCA 90 bp TGTAATCCATCCCAGTGCTTTGTGAAGCTGTGGTGGGAAGATCACTTGAGGCCACCGTTAGAGAAATCCTaGAATTTCTACAAGATCCTG +
Preference number: 4 (lower is better)
Translates to: CNPSQCFVKLWWEDHLRPPLEKS*NFYKIL
Trigger: CAGGATCTTGTAGAAATTTCAGGATTTCTCTAACGG...TGGCCTCAAGTGATCTTCCCACCACAGCTTCACAAAGCACTGGGATGGATTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555343.2
CDS-3UTR GCA 90 bp AACTCTGTAATAAGTCGAAATACAAGATATAAGGCAGGAAACAAGGCAAGGGAAACGGGCTTTAATGTCTaGGAGGGTCCTGGCGCCAGT +
Preference number: 4 (lower is better)
Translates to: NSVISRNTRYKAGNKARETGFNV*EGPGAS
Trigger: ACTGGCGCCAGGACCCTCGCAGACATTAAAGCCCGT...TTCCCTTGCCTTGTTTCCTGCCTTATATCTTGTATTTCGACTTATTACAGAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR GCA 90 bp CAGACGCTTAAGTTGACAACTTGGACTTGGCCAATACTGCATTCTAAATCACCAACCGTGAGGACTCAGTaGTTCAGAGTCTCCGTTGAT +
Preference number: 4 (lower is better)
Translates to: QTLKLTTWTWPILHSKSPTVRTQ*FRVSVD
Trigger: ATCAACGGAGACTCTGAAGCACTGAGTCCTCACGGT...TGGTGATTTAGAATGCAGTATTGGCCAAGTCCAAGTTGTCAACTTAAGCGTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp TTTGTTTCTTCCCAAACCTGCCTGATGTCAAAAGTACGTCAAAAGGAGCCTCACTTAAAGAACTGGGGCTaGTTCCATCAACCATGCCAC +
Preference number: 4 (lower is better)
Translates to: FVSSQTCLMSKVRQKEPHLKNWG*FHQPCH
Trigger: GTGGCATGGTTGATGGAAGCAGCCCCAGTTCTTTAA...GTGAGGCTCCTTTTGACGTACTTTTGACATCAGGCAGGTTTGGGAAGAAACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp AGTGGAAGACTGGCATTTCTACTTAGTTCAGGTAGGTTAACTCCCTTGGTGGAGGTCAAAACTTGGGACTaGCTTGCAATTCTTTTGGGG +
Preference number: 4 (lower is better)
Translates to: SGRLAFLLSSGRLTPLVEVKTWD*LAILLG
Trigger: CCCCAAAAGAATTGCAAGGCAGTCCCAAGTTTTGAC...CTCCACCAAGGGAGTTAACCTACCTGAACTAAGTAGAAATGCCAGTCTTCCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp AACAAGGCAAGGGAAAACACACACAGGGGCATCTACTTGCTGGAAACATGTTGGAAGCTTCCCATAAAATaGCTGCTTGATGCTGAGTTG +
Preference number: 4 (lower is better)
Translates to: NKARENTHRGIYLLETCWKLPIK*LLDAEL
Trigger: CAACTCAGCATCAAGCAGGCATTTTATGGGAAGCTT...CCAACATGTTTCCAGCAAGTAGATGCCCCTGTGTGTGTTTTCCCTTGCCTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GGGGGTAGTGGAAGACTGGCATTTCTACTTAGTTCAGGTAGGTTAACTCCCTTGAAGCTTCCCATAAAATaGCTGCTTGATGCTGAGTTG +
Preference number: 4 (lower is better)
Translates to: GGSGRLAFLLSSGRLTPLKLPIK*LLDAEL
Trigger: CAACTCAGCATCAAGCAGGCATTTTATGGGAAGCTT...CAAGGGAGTTAACCTACCTGAACTAAGTAGAAATGCCAGTCTTCCACTACCCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GCAAGAACCCTCAACTCTGTAATAAGTCGAAATACAAGATATAAGGCAGGAAACCACACTGGAGCGAGATaGTTTCCACCGTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: ARTLNSVISRNTRYKAGNHTGAR*FPPCCC
Trigger: ACAGCAGCACGGTGGAAAGCATCTCGCTCCAGTGTG...GTTTCCTGCCTTATATCTTGTATTTCGACTTATTACAGAGTTGAGGGTTCTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp ACCTGTAATCCATCCCAGTGCTTTGTGAAGCTGTGGTGGGAAGATCACTTGAGGCAGCATACAAACAATTaGTATTTTTGTTCCCTGGGC +
Preference number: 4 (lower is better)
Translates to: TCNPSQCFVKLWWEDHLRQHTNN*YFCSLG
Trigger: GCCCAGGGAACAAAAATAGCAATTGTTTGTATGCTG...CCTCAAGTGATCTTCCCACCACAGCTTCACAAAGCACTGGGATGGATTACAGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555343.2
CDS-3UTR CCA 90 bp CTGGCATTTCTACTTAGTTCAGGTAGGTTAACTCCCTTGGTGGAGAATGCAACCCTGCAGAATCTGTTTTaGTGTCATTGGAGCATCCGA +
Preference number: 4 (lower is better)
Translates to: LAFLLSSGRLTPLVENATLQNLF*CHWSIR
Trigger: TCGGATGCTCCAATGACACCAAAACAGATTCTGCAG...GGTTGCATTCTCCACCAAGGGAGTTAACCTACCTGAACTAAGTAGAAATGCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CCGGTCTTTGGTAAACAGACGCTTAAGTTGACAACTTGGACTTGGCCAATACTGCTGCAGAATCTGTTTTaGTGTCATTGGAGCATCCGA +
Preference number: 4 (lower is better)
Translates to: PVFGKQTLKLTTWTWPILLQNLF*CHWSIR
Trigger: TCGGATGCTCCAATGACACCAAAACAGATTCTGCAG...CAGTATTGGCCAAGTCCAAGTTGTCAACTTAAGCGTCTGTTTACCAAAGACCGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp ATTAGGAAGAGACGTTCATGTTCTCTGTACAATACATCCATTTACAGAATCAGCATCAGCCGTGTCCTCTaGCTCCTCTCCCTCCACTGT +
Preference number: 4 (lower is better)
Translates to: IRKRRSCSLYNTSIYRISISRVL*LLSLHC
Trigger: ACAGTGGAGGGAGAGGAGCCAGAGGACACGGCTGAT...GCTGATTCTGTAAATGGATGTATTGTACAGAGAACATGAACGTCTCTTCCTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CATGGCTTTGTTTCTTCCCAAACCTGCCTGATGTCAAAAGTACGTCAAAAGGAGTGTGATGGTAAGGCATaGAAGGTCCGAGAGTTGATC +
Preference number: 4 (lower is better)
Translates to: HGFVSSQTCLMSKVRQKECDGKA*KVRELI
Trigger: GATCAACTCTCGGACCTTCCATGCCTTACCATCACA...CTCCTTTTGACGTACTTTTGACATCAGGCAGGTTTGGGAAGAAACAAAGCCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp AGTTCAGGTAGGTTAACTCCCTTGGTGGAGAATGCAACCTTCTTGCTTCAGTTTTCTGGTTCGGAGATCTaGCCGAGAGCGTTTCTTAAA +
Preference number: 4 (lower is better)
Translates to: SSGRLTPLVENATFLLQFSGSEI*PRAFLK
Trigger: TTTAAGAAACGCTCTCGGCCAGATCTCCGAACCAGA...AAACTGAAGCAAGAAGGTTGCATTCTCCACCAAGGGAGTTAACCTACCTGAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CCGGTCTTTGGTAAACAGACGCTTAAGTTGACAACTTGGACTTGGCCAATACTGTCCTCTTCTGATCCTTaGGTTCCTGATCCACAGTTT +
Preference number: 4 (lower is better)
Translates to: PVFGKQTLKLTTWTWPILSSSDP*VPDPQF
Trigger: AAACTGTGGATCAGGAACCCAAGGATCAGAAGAGGA...CAGTATTGGCCAAGTCCAAGTTGTCAACTTAAGCGTCTGTTTACCAAAGACCGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp AGTTCAGGTAGGTTAACTCCCTTGGTGGAGAATGCAACCTTCTTGCTTCAGTTTCTCTTTAGTGGGCTGTaGCTTTTCGGTGTGAACACT +
Preference number: 4 (lower is better)
Translates to: SSGRLTPLVENATFLLQFLFSGL*LFGVNT
Trigger: AGTGTTCACACCGAAAAGCCACAGCCCACTAAAGAG...AAACTGAAGCAAGAAGGTTGCATTCTCCACCAAGGGAGTTAACCTACCTGAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp AATCACCACATCATTCCCAACTTGTCACTCATGCTTCAGATGACGAAAATGCCACACTTTCCCAGGAAGTaGTGCCAGACTCACATTCAG +
Preference number: 4 (lower is better)
Translates to: NHHIIPNLSLMLQMTKMPHFPRK*CQTHIQ
Trigger: CTGAATGTGAGTCTGGCACCACTTCCTGGGAAAGTG...TGGCATTTTCGTCATCTGAAGCATGAGTGACAAGTTGGGAATGATGTGGTGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp AGTGGAAGACTGGCATTTCTACTTAGTTCAGGTAGGTTAACTCCCTTGGTGGAGATTCAGGTGTGGAACTaGGGGTCACATTTACAGGAT +
Preference number: 4 (lower is better)
Translates to: SGRLAFLLSSGRLTPLVEIQVWN*GSHLQD
Trigger: ATCCTGTAAATGTGACCCCCAGTTCCACACCTGAAT...CTCCACCAAGGGAGTTAACCTACCTGAACTAAGTAGAAATGCCAGTCTTCCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GGGGGTAGTGGAAGACTGGCATTTCTACTTAGTTCAGGTAGGTTAACTCCCTTGTACCTCATCATTCGATaGGATGGGTATCCAATGCAA +
Preference number: 4 (lower is better)
Translates to: GGSGRLAFLLSSGRLTPLYLIIR*DGYPMQ
Trigger: TTGCATTGGATACCCATCCCATCGAATGATGAGGTA...CAAGGGAGTTAACCTACCTGAACTAAGTAGAAATGCCAGTCTTCCACTACCCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp AGTGGAAGACTGGCATTTCTACTTAGTTCAGGTAGGTTAACTCCCTTGGTGGAGTGTTTCACAGCTATCTaGCAGAAGAGGCTCCTTCAA +
Preference number: 4 (lower is better)
Translates to: SGRLAFLLSSGRLTPLVECFTAI*QKRLLQ
Trigger: TTGAAGGAGCCTCTTCTGCCAGATAGCTGTGAAACA...CTCCACCAAGGGAGTTAACCTACCTGAACTAAGTAGAAATGCCAGTCTTCCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp AGTGGAAGACTGGCATTTCTACTTAGTTCAGGTAGGTTAACTCCCTTGGTGGAGCTGGTGGAACTCAGTTaGAGTTTAGAAAGCTTCCCA +
Preference number: 4 (lower is better)
Translates to: SGRLAFLLSSGRLTPLVELVELS*SLESFP
Trigger: TGGGAAGCTTTCTAAACTCCAACTGAGTTCCACCAG...CTCCACCAAGGGAGTTAACCTACCTGAACTAAGTAGAAATGCCAGTCTTCCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp AACTCTGTAATAAGTCGAAATACAAGATATAAGGCAGGAAACAAGGCAAGGGAAGATGCGTTTGCTCGGTaGCATGTGGGCAGGCTGACT +
Preference number: 4 (lower is better)
Translates to: NSVISRNTRYKAGNKAREDAFAR*HVGRLT
Trigger: AGTCAGCCTGCCCACATGCCACCGAGCAAACGCATC...TTCCCTTGCCTTGTTTCCTGCCTTATATCTTGTATTTCGACTTATTACAGAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp AATCACCACATCATTCCCAACTTGTCACTCATGCTTCAGATGACGAAAATGCCAGGGGCATCTACTTGCTaGAAACATGTTGGGAGAGAG +
Preference number: 4 (lower is better)
Translates to: NHHIIPNLSLMLQMTKMPGASTC*KHVGRE
Trigger: CTCTCTCCCAACATGTTTCCAGCAAGTAGATGCCCC...TGGCATTTTCGTCATCTGAAGCATGAGTGACAAGTTGGGAATGATGTGGTGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp GTGACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCTGCTTGACAACTTGGACTTaGCCAATACTGCATTCTAAA +
Preference number: 4 (lower is better)
Translates to: VTEGFSSVNFGGRQECSCLTTWT*PILHSK
Trigger: TTTAGAATGCAGTATTGGCCAAGTCCAAGTTGTCAA...GCAGGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGTCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GAGAGGCAGGAGCAGGCATGGCTTTGTTTCTTCCCAAACCTGCCTGATGTCAAATTGACAACTTGGACTTaGCCAATACTGCATTCTAAA +
Preference number: 4 (lower is better)
Translates to: ERQEQAWLCFFPNLPDVKLTTWT*PILHSK
Trigger: TTTAGAATGCAGTATTGGCCAAGTCCAAGTTGTCAA...TTTGACATCAGGCAGGTTTGGGAAGAAACAAAGCCATGCCTGCTCCTGCCTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp AGATCAGTGTCAAACTGTACCCTTGAGTGTCCCCAAAGGTTCCAGCAGAGGGAACTTAAGTTGACAACTTaGACTTGGCCAATACTGCAT +
Preference number: 4 (lower is better)
Translates to: RSVSNCTLECPQRFQQRELKLTT*TWPILH
Trigger: ATGCAGTATTGGCCAAGTCCAAGTTGTCAACTTAAG...TTCCCTCTGCTGGAACCTTTGGGGACACTCAAGGGTACAGTTTGACACTGATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp GCAAGAACCCTCAACTCTGTAATAAGTCGAAATACAAGATATAAGGCAGGAAACAGGACTGGACATGTTTaGGCCCCTGTTCCCGGTCTT +
Preference number: 4 (lower is better)
Translates to: ARTLNSVISRNTRYKAGNRTGHV*APVPGL
Trigger: AAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCT...GTTTCCTGCCTTATATCTTGTATTTCGACTTATTACAGAGTTGAGGGTTCTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp ACCTGTAATCCATCCCAGTGCTTTGTGAAGCTGTGGTGGGAAGATCACTTGAGGATACCTGGTTTAGATTaGGAAAGCTCAACATGCCAT +
Preference number: 4 (lower is better)
Translates to: TCNPSQCFVKLWWEDHLRIPGLD*ESSTCH
Trigger: ATGGCATGTTGAGCTTTCCCAATCTAAACCAGGTAT...CCTCAAGTGATCTTCCCACCACAGCTTCACAAAGCACTGGGATGGATTACAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645035.1
CDS-3UTR CCA 90 bp TGTAATCCATCCCAGTGCTTTGTGAAGCTGTGGTGGGAAGATCACTTGAGGCCAAATACCCTGATAACCTaGCTTGAAGTTGAGTCAATG +
Preference number: 4 (lower is better)
Translates to: CNPSQCFVKLWWEDHLRPNTLIT*LEVESM
Trigger: CATTGACTCAACTTCAAGCCAGGTTATCAGGGTATT...TGGCCTCAAGTGATCTTCCCACCACAGCTTCACAAAGCACTGGGATGGATTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555343.2
ENST00000642676.1
CDS-3UTR CCA 90 bp ACCTGTAATCCATCCCAGTGCTTTGTGAAGCTGTGGTGGGAAGATCACTTGAGGAATACCCTGATAACCTaGCTTGAAGTTGAGTCAATG +
Preference number: 4 (lower is better)
Translates to: TCNPSQCFVKLWWEDHLRNTLIT*LEVESM
Trigger: CATTGACTCAACTTCAAGCCAGGTTATCAGGGTATT...CCTCAAGTGATCTTCCCACCACAGCTTCACAAAGCACTGGGATGGATTACAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555343.2
ENST00000642676.1
CDS-3UTR CCA 90 bp ATCAAGAGATACATCGTTTTCACCACTCACAGTGCTGGCTTCATTAGACCCACATGCTTTGTGAAGCTGTaGTGGGAAGATCACTTGAGG +
Preference number: 4 (lower is better)
Translates to: IKRYIVFTTHSAGFIRPTCFVKL*WEDHLR
Trigger: CCTCAAGTGATCTTCCCACCACAGCTTCACAAAGCA...TGTGGGTCTAATGAAGCCAGCACTGTGAGTGGTGAAAACGATGTATCTCTTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644587.1
3UTR CAA 72 bp TCCAAATTTGCTTCAGCAACAGAACCAAGGTCAAACTaGCTCCGTCAACTGGCAAATGACTCAACTGTGACC +
Preference number: 4 (lower is better)
Translates to: SKFASATEPRSN*LRQLANDSTVT
Trigger: GGTCACAGTTGAGTCATTTGCCAGTTGACGGAGCAAGTTTGACCTTGGTTCTGTTGCTGAAGCAAATTTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR CAA 72 bp CCCCTGTTCCCGGTCTTTGGTAAACAGACGCTTAAGTaGACAACTTGGACTTGGCCAATACTGCATTCTAAA +
Preference number: 4 (lower is better)
Translates to: PLFPVFGKQTLK*TTWTWPILHSK
Trigger: TTTAGAATGCAGTATTGGCCAAGTCCAAGTTGTCAACTTAAGCGTCTGTTTACCAAAGACCGGGAACAGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR TCA 90 bp AGACTAACAGACCACTCCCAAGCTTACAGCAGGTTCATACAATGGTGTTTATTCAGTCCTCTGACGCTCTaGACACAAAATTCACAACCC +
Preference number: 4 (lower is better)
Translates to: RLTDHSQAYSRFIQWCLFSPLTL*TQNSQP
Trigger: GGGTTGTGAATTTTGTGTTCAGAGCGTCAGAGGACT...GAATAAACACCATTGTATGAACCTGCTGTAAGCTTGGGAGTGGTCTGTTAGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375689.5
CDS-3UTR TCA 90 bp GAGCACAACGAATATCAGAGAAGTGATGCCTATGGATGTAAAAGGCCAATGAACGTCCTTCTGCCTCTATaGCCTGCAGAATCTGTTTTG +
Preference number: 4 (lower is better)
Translates to: EHNEYQRSDAYGCKRPMNVLLPL*PAESVL
Trigger: CAAAACAGATTCTGCAGGTCATAGAGGCAGAAGGAC...GTTCATTGGCCTTTTACATCCATAGGCATCACTTCTCTGATATTCGTTGTGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375689.5
ENST00000542461.5
ENST00000646367.1
CDS-3UTR TCA 90 bp GCAAGAACCCTCAACTCTGTAATAAGTCGAAATACAAGATATAAGGCAGGAAACTACTTGTGGGGATTCTaGCATGCTGTCATCGTGGGC +
Preference number: 4 (lower is better)
Translates to: ARTLNSVISRNTRYKAGNYLWGF*HAVIVG
Trigger: GCCCACGATGACAGCATGTCAGAATCCCCACAAGTA...GTTTCCTGCCTTATATCTTGTATTTCGACTTATTACAGAGTTGAGGGTTCTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp AGTTCAGGTAGGTTAACTCCCTTGGTGGAGAATGCAACCTTCTTGCTTCAGTTTGATCACATTTGGAGATaGGAAACGAGGTGTTCTCGA +
Preference number: 4 (lower is better)
Translates to: SSGRLTPLVENATFLLQFDHIWR*ETRCSR
Trigger: TCGAGAACACCTCGTTTCTCATCTCCAAATGTGATC...AAACTGAAGCAAGAAGGTTGCATTCTCCACCAAGGGAGTTAACCTACCTGAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp ATTAGGAAGAGACGTTCATGTTCTCTGTACAATACATCCATTTACAGAATCAGCCCAATACAGTCATCGTaGCAGAACGCACCGCAGCCT +
Preference number: 4 (lower is better)
Translates to: IRKRRSCSLYNTSIYRISPIQSS*QNAPQP
Trigger: AGGCTGCGGTGCGTTCTGTCACGATGACTGTATTGG...GCTGATTCTGTAAATGGATGTATTGTACAGAGAACATGAACGTCTCTTCCTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp CAGACGCTTAAGTTGACAACTTGGACTTGGCCAATACTGCATTCTAAATCACCAGTAGGAGGAGAGATGTaGAAAGCAAGATGCGTTTGC +
Preference number: 4 (lower is better)
Translates to: QTLKLTTWTWPILHSKSPVGGEM*KARCVC
Trigger: GCAAACGCATCTTGCTTTTCACATCTCTCCTCCTAC...TGGTGATTTAGAATGCAGTATTGGCCAAGTCCAAGTTGTCAACTTAAGCGTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR TCA 90 bp CACATCTCAGACACAAGCTGTAGACTAACAGACCACTCCCAAGCTTACAGCAGGGATGTAAAAGGCCAATaGACAAGATACTATGAAGGA +
Preference number: 4 (lower is better)
Translates to: HISDTSCRLTDHSQAYSRDVKGQ*TRYYEG
Trigger: TCCTTCATAGTATCTTGTTCATTGGCCTTTTACATC...CCTGCTGTAAGCTTGGGAGTGGTCTGTTAGTCTACAGCTTGTGTCTGAGATGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375689.5
ENST00000542461.5
ENST00000646367.1
CDS-3UTR GCA 90 bp AATCACCACATCATTCCCAACTTGTCACTCATGCTTCAGATGACGAAAATGCCATCAAATGCTCTGTTCTaGAGGCAATCAGTCGGTGAG +
Preference number: 4 (lower is better)
Translates to: NHHIIPNLSLMLQMTKMPSNALF*RQSVGE
Trigger: CTCACCGACTGATTGCCTGCAGAACAGAGCATTTGA...TGGCATTTTCGTCATCTGAAGCATGAGTGACAAGTTGGGAATGATGTGGTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GGGGGTAGTGGAAGACTGGCATTTCTACTTAGTTCAGGTAGGTTAACTCCCTTGAGGCAAGAGTGCTCCTaGCTAAAGAGTATTATATCA +
Preference number: 4 (lower is better)
Translates to: GGSGRLAFLLSSGRLTPLRQECS*LKSIIS
Trigger: TGATATAATACTCTTTAGGCAGGAGCACTCTTGCCT...CAAGGGAGTTAACCTACCTGAACTAAGTAGAAATGCCAGTCTTCCACTACCCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp CTGGCATTTCTACTTAGTTCAGGTAGGTTAACTCCCTTGGTGGAGAATGCAACCAGAATGCAACCTTCTTaGTTCAGTTTCAAGTCCCTC +
Preference number: 4 (lower is better)
Translates to: LAFLLSSGRLTPLVENATRMQPS*FSFKSL
Trigger: GAGGGACTTGAAACTGAAGCAAGAAGGTTGCATTCT...GGTTGCATTCTCCACCAAGGGAGTTAACCTACCTGAACTAAGTAGAAATGCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp AGTTCAGGTAGGTTAACTCCCTTGGTGGAGAATGCAACCTTCTTGCTTCAGTTTAACCAAGGTCAAACTTaGTCCGTCAACTGGCAAATG +
Preference number: 4 (lower is better)
Translates to: SSGRLTPLVENATFLLQFNQGQT*SVNWQM
Trigger: CATTTGCCAGTTGACGGAGCAAGTTTGACCTTGGTT...AAACTGAAGCAAGAAGGTTGCATTCTCCACCAAGGGAGTTAACCTACCTGAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp ACCTGTAATCCATCCCAGTGCTTTGTGAAGCTGTGGTGGGAAGATCACTTGAGGATATTTGTTTCCAGGTaGAGAACCGTTAGAGAAATC +
Preference number: 4 (lower is better)
Translates to: TCNPSQCFVKLWWEDHLRIFVSR*RTVREI
Trigger: GATTTCTCTAACGGTTCTGCACCTGGAAACAAATAT...CCTCAAGTGATCTTCCCACCACAGCTTCACAAAGCACTGGGATGGATTACAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555343.2
CDS-3UTR CCA 90 bp CATGGCTTTGTTTCTTCCCAAACCTGCCTGATGTCAAAAGTACGTCAAAAGGAGCTGCAGAATCTGTTTTaGTGTCATTGGAGCATCCGA +
Preference number: 4 (lower is better)
Translates to: HGFVSSQTCLMSKVRQKELQNLF*CHWSIR
Trigger: TCGGATGCTCCAATGACACCAAAACAGATTCTGCAG...CTCCTTTTGACGTACTTTTGACATCAGGCAGGTTTGGGAAGAAACAAAGCCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp CATGGCTTTGTTTCTTCCCAAACCTGCCTGATGTCAAAAGTACGTCAAAAGGAGGCAATGACTCTTCTTTaGTCAAACCCAGCTTCTGTC +
Preference number: 4 (lower is better)
Translates to: HGFVSSQTCLMSKVRQKEAMTLL*SNPASV
Trigger: GACAGAAGCTGGGTTTGACCAAAGAAGAGTCATTGC...CTCCTTTTGACGTACTTTTGACATCAGGCAGGTTTGGGAAGAAACAAAGCCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp AATCACCACATCATTCCCAACTTGTCACTCATGCTTCAGATGACGAAAATGCCATGTACAGATTCCTTCTaGCTCTGGTTCGGAGATCTG +
Preference number: 4 (lower is better)
Translates to: NHHIIPNLSLMLQMTKMPCTDSF*LWFGDL
Trigger: CAGATCTCCGAACCAGAGCCAGAAGGAATCTGTACA...TGGCATTTTCGTCATCTGAAGCATGAGTGACAAGTTGGGAATGATGTGGTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp GCAAGAACCCTCAACTCTGTAATAAGTCGAAATACAAGATATAAGGCAGGAAACAAAGTTGAATCCGGATaGGCGGGACTTTGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: ARTLNSVISRNTRYKAGNKVESG*AGLWAP
Trigger: AGGAGCCCAAAGTCCCGCCCATCCGGATTCAACTTT...GTTTCCTGCCTTATATCTTGTATTTCGACTTATTACAGAGTTGAGGGTTCTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp GCAAGAACCCTCAACTCTGTAATAAGTCGAAATACAAGATATAAGGCAGGAAACTCAGCTACTGAGGTTTaGGAGGACAGTAGGGGCAAG +
Preference number: 4 (lower is better)
Translates to: ARTLNSVISRNTRYKAGNSATEV*EDSRGK
Trigger: CTTGCCCCTACTGTCCTCCCAAACCTCAGTAGCTGA...GTTTCCTGCCTTATATCTTGTATTTCGACTTATTACAGAGTTGAGGGTTCTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp AGTGGAAGACTGGCATTTCTACTTAGTTCAGGTAGGTTAACTCCCTTGGTGGAGCATCATTCGATGGGATaGGTATCCAATGCAAAGAAC +
Preference number: 4 (lower is better)
Translates to: SGRLAFLLSSGRLTPLVEHHSMG*VSNAKN
Trigger: GTTCTTTGCATTGGATACCCATCCCATCGAATGATG...CTCCACCAAGGGAGTTAACCTACCTGAACTAAGTAGAAATGCCAGTCTTCCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp AGTGGAAGACTGGCATTTCTACTTAGTTCAGGTAGGTTAACTCCCTTGGTGGAGCAGATTGGTTCCAATTaGGTTTCTCATCCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: SGRLAFLLSSGRLTPLVEQIGSN*VSHPCP
Trigger: TGGACAAGGATGAGAAACCCAATTGGAACCAATCTG...CTCCACCAAGGGAGTTAACCTACCTGAACTAAGTAGAAATGCCAGTCTTCCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CAGACGCTTAAGTTGACAACTTGGACTTGGCCAATACTGCATTCTAAATCACCAAAGCCCTTAAAGAACTaGGGCTGCTTCCATCAACCA +
Preference number: 4 (lower is better)
Translates to: QTLKLTTWTWPILHSKSPKPLKN*GCFHQP
Trigger: TGGTTGATGGAAGCAGCCCCAGTTCTTTAAGGGCTT...TGGTGATTTAGAATGCAGTATTGGCCAAGTCCAAGTTGTCAACTTAAGCGTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp TTTGTTTCTTCCCAAACCTGCCTGATGTCAAAAGTACGTCAAAAGGAGCCTCACGAGGGAGTCAAAACTTaGGACTGCCTTGCAATTCTT +
Preference number: 4 (lower is better)
Translates to: FVSSQTCLMSKVRQKEPHEGVKT*DCLAIL
Trigger: AAGAATTGCAAGGCAGTCCCAAGTTTTGACTCCCTC...GTGAGGCTCCTTTTGACGTACTTTTGACATCAGGCAGGTTTGGGAAGAAACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp CACAACGAATATCAGAGAAGTGATGCCTATGGATGTAAAAGGCCAATGAACAAGGTCCTTCTGCCTCTATaGCCTGCAGAATCTGTTTTG +
Preference number: 4 (lower is better)
Translates to: HNEYQRSDAYGCKRPMNKVLLPL*PAESVL
Trigger: CAAAACAGATTCTGCAGGTCATAGAGGCAGAAGGAC...CTTGTTCATTGGCCTTTTACATCCATAGGCATCACTTCTCTGATATTCGTTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375689.5
ENST00000542461.5
ENST00000646367.1
CDS-3UTR TCA 90 bp CTGGCATTTCTACTTAGTTCAGGTAGGTTAACTCCCTTGGTGGAGAATGCAACCCTTCAGAGTCTCCGTTaGTTTTCAGCTTTTCAATGT +
Preference number: 4 (lower is better)
Translates to: LAFLLSSGRLTPLVENATLQSLR*FSAFQC
Trigger: ACATTGAAAAGCTGAAAATCAACGGAGACTCTGAAG...GGTTGCATTCTCCACCAAGGGAGTTAACCTACCTGAACTAAGTAGAAATGCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp CCGGTCTTTGGTAAACAGACGCTTAAGTTGACAACTTGGACTTGGCCAATACTGGTTAGTGGATCACACTaGGACAGAAAAGTTCCAAAT +
Preference number: 4 (lower is better)
Translates to: PVFGKQTLKLTTWTWPILVSGSH*DRKVPN
Trigger: ATTTGGAACTTTTCTGTCTCAGTGTGATCCACTAAC...CAGTATTGGCCAAGTCCAAGTTGTCAACTTAAGCGTCTGTTTACCAAAGACCGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GAGCACAACGAATATCAGAGAAGTGATGCCTATGGATGTAAAAGGCCAATGAACTCTGCCTCTATGACCTaGAGAATCTGTTTTGGTGTC +
Preference number: 4 (lower is better)
Translates to: EHNEYQRSDAYGCKRPMNSASMT*RICFGV
Trigger: GACACCAAAACAGATTCTGCAGGTCATAGAGGCAGA...GTTCATTGGCCTTTTACATCCATAGGCATCACTTCTCTGATATTCGTTGTGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375689.5
ENST00000542461.5
ENST00000646367.1
CDS-3UTR GCA 90 bp ATTAGGAAGAGACGTTCATGTTCTCTGTACAATACATCCATTTACAGAATCAGCGATGCAGAGGCCGCCTaGTCAAAGGATTTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: IRKRRSCSLYNTSIYRISDAEAA*SKDFLF
Trigger: GAAGAGGAAATCCTTTGAGCAGGCGGCCTCTGCATC...GCTGATTCTGTAAATGGATGTATTGTACAGAGAACATGAACGTCTCTTCCTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp CCGGTCTTTGGTAAACAGACGCTTAAGTTGACAACTTGGACTTGGCCAATACTGAGGCAAGAGTGCTCCTaGCTAAAGAGTATTATATCA +
Preference number: 4 (lower is better)
Translates to: PVFGKQTLKLTTWTWPILRQECS*LKSIIS
Trigger: TGATATAATACTCTTTAGGCAGGAGCACTCTTGCCT...CAGTATTGGCCAAGTCCAAGTTGTCAACTTAAGCGTCTGTTTACCAAAGACCGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp AACTCTGTAATAAGTCGAAATACAAGATATAAGGCAGGAAACAAGGCAAGGGAATTTCACATACACAGGTaGGTGGAGATGCCCACTCCC +
Preference number: 4 (lower is better)
Translates to: NSVISRNTRYKAGNKAREFHIHR*VEMPTP
Trigger: GGGAGTGGGCATCTCCACGCACCTGTGTATGTGAAA...TTCCCTTGCCTTGTTTCCTGCCTTATATCTTGTATTTCGACTTATTACAGAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp AACTCTGTAATAAGTCGAAATACAAGATATAAGGCAGGAAACAAGGCAAGGGAAAAAGCAAGATGCGTTTaGTCGGTGGCATGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: NSVISRNTRYKAGNKAREKARCV*SVACGQ
Trigger: CTGCCCACATGCCACCGAGCAAACGCATCTTGCTTT...TTCCCTTGCCTTGTTTCCTGCCTTATATCTTGTATTTCGACTTATTACAGAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp CAGACGCTTAAGTTGACAACTTGGACTTGGCCAATACTGCATTCTAAATCACCACTGCAGAATCTGTTTTaGTGTCATTGGAGCATCCGA +
Preference number: 4 (lower is better)
Translates to: QTLKLTTWTWPILHSKSPLQNLF*CHWSIR
Trigger: TCGGATGCTCCAATGACACCAAAACAGATTCTGCAG...TGGTGATTTAGAATGCAGTATTGGCCAAGTCCAAGTTGTCAACTTAAGCGTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp GAGCACAACGAATATCAGAGAAGTGATGCCTATGGATGTAAAAGGCCAATGAACCTGCAGAATCTGTTTTaGTGTCATTGGAGCATCCGA +
Preference number: 4 (lower is better)
Translates to: EHNEYQRSDAYGCKRPMNLQNLF*CHWSIR
Trigger: TCGGATGCTCCAATGACACCAAAACAGATTCTGCAG...GTTCATTGGCCTTTTACATCCATAGGCATCACTTCTCTGATATTCGTTGTGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375689.5
ENST00000542461.5
ENST00000646367.1
CDS-3UTR CCA 90 bp CAGACGCTTAAGTTGACAACTTGGACTTGGCCAATACTGCATTCTAAATCACCAATTCAGGTGTGGAACTaGGGGTCACATTTACAGGAT +
Preference number: 4 (lower is better)
Translates to: QTLKLTTWTWPILHSKSPIQVWN*GSHLQD
Trigger: ATCCTGTAAATGTGACCCCCAGTTCCACACCTGAAT...TGGTGATTTAGAATGCAGTATTGGCCAAGTCCAAGTTGTCAACTTAAGCGTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp TTTGTTTCTTCCCAAACCTGCCTGATGTCAAAAGTACGTCAAAAGGAGCCTCACATGGTATGTGTTCTCTaGATTCTGGTTTGGGCTGTT +
Preference number: 4 (lower is better)
Translates to: FVSSQTCLMSKVRQKEPHMVCVL*ILVWAV
Trigger: AACAGCCCAAACCAGAATCCAGAGAACACATACCAT...GTGAGGCTCCTTTTGACGTACTTTTGACATCAGGCAGGTTTGGGAAGAAACAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GCAAGAACCCTCAACTCTGTAATAAGTCGAAATACAAGATATAAGGCAGGAAACGTCCCAACTTCCCACTaGGAAAAACTGGAGGGATCT +
Preference number: 4 (lower is better)
Translates to: ARTLNSVISRNTRYKAGNVPTSH*EKLEGS
Trigger: AGATCCCTCCAGTTTTTCCCAGTGGGAAGTTGGGAC...GTTTCCTGCCTTATATCTTGTATTTCGACTTATTACAGAGTTGAGGGTTCTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GCAAGAACCCTCAACTCTGTAATAAGTCGAAATACAAGATATAAGGCAGGAAACTCACCTGCAAACATCTaGACGGCTGACTCACAAGGT +
Preference number: 4 (lower is better)
Translates to: ARTLNSVISRNTRYKAGNSPANI*TADSQG
Trigger: ACCTTGTGAGTCAGCCGTCCAGATGTTTGCAGGTGA...GTTTCCTGCCTTATATCTTGTATTTCGACTTATTACAGAGTTGAGGGTTCTTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp ACCTGTAATCCATCCCAGTGCTTTGTGAAGCTGTGGTGGGAAGATCACTTGAGGACATTCTTTGCAAAGTaGATTCAGTTCTCCTCAAAA +
Preference number: 4 (lower is better)
Translates to: TCNPSQCFVKLWWEDHLRTFFAK*IQFSSK
Trigger: TTTTGAGGAGAACTGAATCCACTTTGCAAAGAATGT...CCTCAAGTGATCTTCCCACCACAGCTTCACAAAGCACTGGGATGGATTACAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649901.1
3UTR CAA 72 bp CTGGCATTTCTACTTAGTTCAGGTAGGTTAACTCCCTaGGTGGAGAATGCAACCTTCTTGCTTCAGTTTCAA +
Preference number: 4 (lower is better)
Translates to: LAFLLSSGRLTP*VENATFLLQFQ
Trigger: TTGAAACTGAAGCAAGAAGGTTGCATTCTCCACCAAGGGAGTTAACCTACCTGAACTAAGTAGAAATGCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp ATTAGGAAGAGACGTTCATGTTCTCTGTACAATACATCCATTTACAGAATCAGCGTAGAGGGGAACATCTaGGGCCACAGATTTTGCATC +
Preference number: 4 (lower is better)
Translates to: IRKRRSCSLYNTSIYRISVEGNI*GHRFCI
Trigger: GATGCAAAATCTGTGGCCTCAGATGTTCCCCTCTAC...GCTGATTCTGTAAATGGATGTATTGTACAGAGAACATGAACGTCTCTTCCTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp AGTTCAGGTAGGTTAACTCCCTTGGTGGAGAATGCAACCTTCTTGCTTCAGTTTTGTGGCTTTTCGGTGTaGACACTTTCAATTGTGTTA +
Preference number: 4 (lower is better)
Translates to: SSGRLTPLVENATFLLQFCGFSV*TLSIVL
Trigger: TAACACAATTGAAAGTGTTCACACCGAAAAGCCACA...AAACTGAAGCAAGAAGGTTGCATTCTCCACCAAGGGAGTTAACCTACCTGAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp ATTAGGAAGAGACGTTCATGTTCTCTGTACAATACATCCATTTACAGAATCAGCCCACCCAGGGTGGTTTaGTACGTGAAAGTTGAATCC +
Preference number: 4 (lower is better)
Translates to: IRKRRSCSLYNTSIYRISPPRVV*YVKVES
Trigger: GGATTCAACTTTCACGTATCAAACCACCCTGGGTGG...GCTGATTCTGTAAATGGATGTATTGTACAGAGAACATGAACGTCTCTTCCTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp ATTAGGAAGAGACGTTCATGTTCTCTGTACAATACATCCATTTACAGAATCAGCTCCTTCATAGTGGGATaGCTGTCAAGAGCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: IRKRRSCSLYNTSIYRISSFIVG*LSRAWP
Trigger: TGGCCAAGCTCTTGACAGTCATCCCACTATGAAGGA...GCTGATTCTGTAAATGGATGTATTGTACAGAGAACATGAACGTCTCTTCCTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp AGTTCAGGTAGGTTAACTCCCTTGGTGGAGAATGCAACCTTCTTGCTTCAGTTTCTTCAGAGTCTCCGTTaGTTTTCAGCTTTTCAATGT +
Preference number: 4 (lower is better)
Translates to: SSGRLTPLVENATFLLQFLQSLR*FSAFQC
Trigger: ACATTGAAAAGCTGAAAATCAACGGAGACTCTGAAG...AAACTGAAGCAAGAAGGTTGCATTCTCCACCAAGGGAGTTAACCTACCTGAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp GCAAGAACCCTCAACTCTGTAATAAGTCGAAATACAAGATATAAGGCAGGAAACAAACATCTGGACGGCTaGCTCACAAGGTCTACAGAT +
Preference number: 4 (lower is better)
Translates to: ARTLNSVISRNTRYKAGNKHLDG*LTRSTD
Trigger: ATCTGTAGACCTTGTGAGTCAGCCGTCCAGATGTTT...GTTTCCTGCCTTATATCTTGTATTTCGACTTATTACAGAGTTGAGGGTTCTTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp CACAACGAATATCAGAGAAGTGATGCCTATGGATGTAAAAGGCCAATGAACAAGTCTGCCTCTATGACCTaGAGAATCTGTTTTGGTGTC +
Preference number: 4 (lower is better)
Translates to: HNEYQRSDAYGCKRPMNKSASMT*RICFGV
Trigger: GACACCAAAACAGATTCTGCAGGTCATAGAGGCAGA...CTTGTTCATTGGCCTTTTACATCCATAGGCATCACTTCTCTGATATTCGTTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375689.5
ENST00000542461.5
ENST00000646367.1
CDS-3UTR GCA 90 bp ATTAGGAAGAGACGTTCATGTTCTCTGTACAATACATCCATTTACAGAATCAGCGAGCGTTTCTTAAAATaGCCATCTCGCTGTCGGGTG +
Preference number: 4 (lower is better)
Translates to: IRKRRSCSLYNTSIYRISERFLK*PSRCRV
Trigger: CACCCGACAGCGAGATGGGCATTTTAAGAAACGCTC...GCTGATTCTGTAAATGGATGTATTGTACAGAGAACATGAACGTCTCTTCCTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp CAGACGCTTAAGTTGACAACTTGGACTTGGCCAATACTGCATTCTAAATCACCAGGGATGGGTATCCAATaGAAAGAACTGTTAGAAACG +
Preference number: 4 (lower is better)
Translates to: QTLKLTTWTWPILHSKSPGMGIQ*KELLET
Trigger: CGTTTCTAACAGTTCTTTGCATTGGATACCCATCCC...TGGTGATTTAGAATGCAGTATTGGCCAAGTCCAAGTTGTCAACTTAAGCGTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp AACTCTGTAATAAGTCGAAATACAAGATATAAGGCAGGAAACAAGGCAAGGGAACATGTAAAGATCCCATaGGTAGCGAGCCATGGCTCT +
Preference number: 4 (lower is better)
Translates to: NSVISRNTRYKAGNKAREHVKIP*VASHGS
Trigger: AGAGCCATGGCTCGCTACGCATGGGATCTTTACATG...TTCCCTTGCCTTGTTTCCTGCCTTATATCTTGTATTTCGACTTATTACAGAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp CATGGCTTTGTTTCTTCCCAAACCTGCCTGATGTCAAAAGTACGTCAAAAGGAGAGGCAAGAGTGCTCCTaGCTAAAGAGTATTATATCA +
Preference number: 4 (lower is better)
Translates to: HGFVSSQTCLMSKVRQKERQECS*LKSIIS
Trigger: TGATATAATACTCTTTAGGCAGGAGCACTCTTGCCT...CTCCTTTTGACGTACTTTTGACATCAGGCAGGTTTGGGAAGAAACAAAGCCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp AATCACCACATCATTCCCAACTTGTCACTCATGCTTCAGATGACGAAAATGCCAAGAATGCAACCTTCTTaGTTCAGTTTCAAGTCCCTC +
Preference number: 4 (lower is better)
Translates to: NHHIIPNLSLMLQMTKMPRMQPS*FSFKSL
Trigger: GAGGGACTTGAAACTGAAGCAAGAAGGTTGCATTCT...TGGCATTTTCGTCATCTGAAGCATGAGTGACAAGTTGGGAATGATGTGGTGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CACAACGAATATCAGAGAAGTGATGCCTATGGATGTAAAAGGCCAATGAACAAGCTGCAGAATCTGTTTTaGTGTCATTGGAGCATCCGA +
Preference number: 4 (lower is better)
Translates to: HNEYQRSDAYGCKRPMNKLQNLF*CHWSIR
Trigger: TCGGATGCTCCAATGACACCAAAACAGATTCTGCAG...CTTGTTCATTGGCCTTTTACATCCATAGGCATCACTTCTCTGATATTCGTTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375689.5
ENST00000542461.5
ENST00000646367.1
CDS-3UTR CCA 90 bp CAGACGCTTAAGTTGACAACTTGGACTTGGCCAATACTGCATTCTAAATCACCAATGGTATGTGTTCTCTaGATTCTGGTTTGGGCTGTT +
Preference number: 4 (lower is better)
Translates to: QTLKLTTWTWPILHSKSPMVCVL*ILVWAV
Trigger: AACAGCCCAAACCAGAATCCAGAGAACACATACCAT...TGGTGATTTAGAATGCAGTATTGGCCAAGTCCAAGTTGTCAACTTAAGCGTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GCAAGAACCCTCAACTCTGTAATAAGTCGAAATACAAGATATAAGGCAGGAAACCTGGGGCTCAACAGATaGTATGTGTTCTCTGGATTC +
Preference number: 4 (lower is better)
Translates to: ARTLNSVISRNTRYKAGNLGLNR*YVFSGF
Trigger: GAATCCAGAGAACACATACCATCTGTTGAGCCCCAG...GTTTCCTGCCTTATATCTTGTATTTCGACTTATTACAGAGTTGAGGGTTCTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp AACTCTGTAATAAGTCGAAATACAAGATATAAGGCAGGAAACAAGGCAAGGGAAGTCCCAACTTCCCACTaGGAAAAACTGGAGGGATCT +
Preference number: 4 (lower is better)
Translates to: NSVISRNTRYKAGNKAREVPTSH*EKLEGS
Trigger: AGATCCCTCCAGTTTTTCCCAGTGGGAAGTTGGGAC...TTCCCTTGCCTTGTTTCCTGCCTTATATCTTGTATTTCGACTTATTACAGAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GCAAGAACCCTCAACTCTGTAATAAGTCGAAATACAAGATATAAGGCAGGAAACCCAAAGTTTGCTTTGTaGCTCAGCTGCACCACACTT +
Preference number: 4 (lower is better)
Translates to: ARTLNSVISRNTRYKAGNPKFAL*LSCTTL
Trigger: AAGTGTGGTGCAGCTGAGCCACAAAGCAAACTTTGG...GTTTCCTGCCTTATATCTTGTATTTCGACTTATTACAGAGTTGAGGGTTCTTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CATGGCTTTGTTTCTTCCCAAACCTGCCTGATGTCAAAAGTACGTCAAAAGGAGATACCTGGTTTAGATTaGGAAAGCTCAACATGCCAT +
Preference number: 4 (lower is better)
Translates to: HGFVSSQTCLMSKVRQKEIPGLD*ESSTCH
Trigger: ATGGCATGTTGAGCTTTCCCAATCTAAACCAGGTAT...CTCCTTTTGACGTACTTTTGACATCAGGCAGGTTTGGGAAGAAACAAAGCCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646985.1
CDS-3UTR TCA 90 bp GCAAGAACCCTCAACTCTGTAATAAGTCGAAATACAAGATATAAGGCAGGAAACCTGACTTGCATCTCATaGGTAAATTCACCATCAGCC +
Preference number: 4 (lower is better)
Translates to: ARTLNSVISRNTRYKAGNLTCIS*VNSPSA
Trigger: GGCTGATGGTGAATTTACTCATGAGATGCAAGTCAG...GTTTCCTGCCTTATATCTTGTATTTCGACTTATTACAGAGTTGAGGGTTCTTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR TCA 90 bp AGACTAACAGACCACTCCCAAGCTTACAGCAGGTTCATACAATGGTGTTTATTCCAAAGGCAGTTAAGATaGGGTACTGAGCAAATATTC +
Preference number: 4 (lower is better)
Translates to: RLTDHSQAYSRFIQWCLFQRQLR*GTEQIF
Trigger: GAATATTTGCTCAGTACCTCATCTTAACTGCCTTTG...GAATAAACACCATTGTATGAACCTGCTGTAAGCTTGGGAGTGGTCTGTTAGTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375689.5
ENST00000542461.5
ENST00000646367.1
CDS-3UTR GCA 90 bp AACTCTGTAATAAGTCGAAATACAAGATATAAGGCAGGAAACAAGGCAAGGGAATCAAATGCTCTGTTCTaGAGGCAATCAGTCGGTGAG +
Preference number: 4 (lower is better)
Translates to: NSVISRNTRYKAGNKARESNALF*RQSVGE
Trigger: CTCACCGACTGATTGCCTGCAGAACAGAGCATTTGA...TTCCCTTGCCTTGTTTCCTGCCTTATATCTTGTATTTCGACTTATTACAGAGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp ATTAGGAAGAGACGTTCATGTTCTCTGTACAATACATCCATTTACAGAATCAGCAGATCCCTTTGTCACTaGAGCTTCTCTAGTGTCAGC +
Preference number: 4 (lower is better)
Translates to: IRKRRSCSLYNTSIYRISRSLCH*SFSSVS
Trigger: GCTGACACTAGAGAAGCTGCAGTGACAAAGGGATCT...GCTGATTCTGTAAATGGATGTATTGTACAGAGAACATGAACGTCTCTTCCTAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GCAAGAACCCTCAACTCTGTAATAAGTCGAAATACAAGATATAAGGCAGGAAACGTCAAAACTTGGGACTaGCTTGCAATTCTTTTGGGG +
Preference number: 4 (lower is better)
Translates to: ARTLNSVISRNTRYKAGNVKTWD*LAILLG
Trigger: CCCCAAAAGAATTGCAAGGCAGTCCCAAGTTTTGAC...GTTTCCTGCCTTATATCTTGTATTTCGACTTATTACAGAGTTGAGGGTTCTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp ATTAGGAAGAGACGTTCATGTTCTCTGTACAATACATCCATTTACAGAATCAGCGTTACTTTAACCCTGTaGTGGCTTCTTTCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: IRKRRSCSLYNTSIYRISVTLTL*WLLSWP
Trigger: TGGCCAGGAAAGAAGCCAGCACAGGGTTAAAGTAAC...GCTGATTCTGTAAATGGATGTATTGTACAGAGAACATGAACGTCTCTTCCTAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp ATTAGGAAGAGACGTTCATGTTCTCTGTACAATACATCCATTTACAGAATCAGCGTGAGGATTCAGGTGTaGAACTGGGGGTCACATTTA +
Preference number: 4 (lower is better)
Translates to: IRKRRSCSLYNTSIYRISVRIQV*NWGSHL
Trigger: TAAATGTGACCCCCAGTTCCACACCTGAATCCTCAC...GCTGATTCTGTAAATGGATGTATTGTACAGAGAACATGAACGTCTCTTCCTAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GCAAGAACCCTCAACTCTGTAATAAGTCGAAATACAAGATATAAGGCAGGAAACGTGTTCTCTGGATTCTaGTTTGGGCTGTTTCACTAC +
Preference number: 4 (lower is better)
Translates to: ARTLNSVISRNTRYKAGNVFSGF*FGLFHY
Trigger: GTAGTGAAACAGCCCAAACCAGAATCCAGAGAACAC...GTTTCCTGCCTTATATCTTGTATTTCGACTTATTACAGAGTTGAGGGTTCTTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CATGGCTTTGTTTCTTCCCAAACCTGCCTGATGTCAAAAGTACGTCAAAAGGAGTTGACAACTTGGACTTaGCCAATACTGCATTCTAAA +
Preference number: 4 (lower is better)
Translates to: HGFVSSQTCLMSKVRQKELTTWT*PILHSK
Trigger: TTTAGAATGCAGTATTGGCCAAGTCCAAGTTGTCAA...CTCCTTTTGACGTACTTTTGACATCAGGCAGGTTTGGGAAGAAACAAAGCCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp TCAGACACAAGCTGTAGACTAACAGACCACTCCCAAGCTTACAGCAGGTTCATAACATTCTTTGCAAAGTaGATTCAGTTCTCCTCAAAA +
Preference number: 4 (lower is better)
Translates to: SDTSCRLTDHSQAYSRFITFFAK*IQFSSK
Trigger: TTTTGAGGAGAACTGAATCCACTTTGCAAAGAATGT...TATGAACCTGCTGTAAGCTTGGGAGTGGTCTGTTAGTCTACAGCTTGTGTCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375689.5
CDS-3UTR TCA 90 bp CAAACCATTAATCCATTAAAAGAGCACAACGAATATCAGAGAAGTGATGCCTATGTCCTTCTGCCTCTATaGCCTGCAGAATCTGTTTTG +
Preference number: 4 (lower is better)
Translates to: QTINPLKEHNEYQRSDAYVLLPL*PAESVL
Trigger: CAAAACAGATTCTGCAGGTCATAGAGGCAGAAGGAC...ATAGGCATCACTTCTCTGATATTCGTTGTGCTCTTTTAATGGATTAATGGTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375689.5
ENST00000542461.5
ENST00000646367.1
CDS-3UTR TCA 90 bp AACTCTGTAATAAGTCGAAATACAAGATATAAGGCAGGAAACAAGGCAAGGGAAGCACGGACTTCCTTCTaGTCTTCACAACTAAAGGAA +
Preference number: 4 (lower is better)
Translates to: NSVISRNTRYKAGNKAREARTSF*SSQLKE
Trigger: TTCCTTTAGTTGTGAAGATCAGAAGGAAGTCCGTGC...TTCCCTTGCCTTGTTTCCTGCCTTATATCTTGTATTTCGACTTATTACAGAGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp CACAACGAATATCAGAGAAGTGATGCCTATGGATGTAAAAGGCCAATGAACAAGCAAAGGCAGTTAAGATaGGGTACTGAGCAAATATTC +
Preference number: 4 (lower is better)
Translates to: HNEYQRSDAYGCKRPMNKQRQLR*GTEQIF
Trigger: GAATATTTGCTCAGTACCTCATCTTAACTGCCTTTG...CTTGTTCATTGGCCTTTTACATCCATAGGCATCACTTCTCTGATATTCGTTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375689.5
ENST00000542461.5
ENST00000646367.1
CDS-3UTR CCA 90 bp GACCACTCCCAAGCTTACAGCAGGTTCATACAATGGTGTTTATTCAAAGATATACTGTTTTGGTGTCATTaGAGCATCCGAGTAGTTTTC +
Preference number: 4 (lower is better)
Translates to: DHSQAYSRFIQWCLFKDILFWCH*SIRVVF
Trigger: GAAAACTACTCGGATGCTCCAATGACACCAAAACAG...TATATCTTTGAATAAACACCATTGTATGAACCTGCTGTAAGCTTGGGAGTGGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375689.5
ENST00000542461.5
ENST00000646367.1
CDS-3UTR CCA 90 bp GCAAGAACCCTCAACTCTGTAATAAGTCGAAATACAAGATATAAGGCAGGAAACCAGATTGGTTCCAATTaGGTTTCTCATCCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: ARTLNSVISRNTRYKAGNQIGSN*VSHPCP
Trigger: TGGACAAGGATGAGAAACCCAATTGGAACCAATCTG...GTTTCCTGCCTTATATCTTGTATTTCGACTTATTACAGAGTTGAGGGTTCTTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp ATTAGGAAGAGACGTTCATGTTCTCTGTACAATACATCCATTTACAGAATCAGCCTGGTGGAACTCAGTTaGAGTTTAGAAAGCTTCCCA +
Preference number: 4 (lower is better)
Translates to: IRKRRSCSLYNTSIYRISLVELS*SLESFP
Trigger: TGGGAAGCTTTCTAAACTCCAACTGAGTTCCACCAG...GCTGATTCTGTAAATGGATGTATTGTACAGAGAACATGAACGTCTCTTCCTAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR CAA 72 bp CAATACTGCATTCTAAATCACCACATCATTCCCAACTaGTCACTCATGCTTCAGATGACGAAAATGCCACAT +
Preference number: 4 (lower is better)
Translates to: QYCILNHHIIPN*SLMLQMTKMPH
Trigger: ATGTGGCATTTTCGTCATCTGAAGCATGAGTGACAAGTTGGGAATGATGTGGTGATTTAGAATGCAGTATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR TCA 90 bp CTAACAGACCACTCCCAAGCTTACAGCAGGTTCATACAATGGTGTTTATTCAAAGATGTAAAAGGCCAATaGACAAGATACTATGAAGGA +
Preference number: 4 (lower is better)
Translates to: LTDHSQAYSRFIQWCLFKDVKGQ*TRYYEG
Trigger: TCCTTCATAGTATCTTGTTCATTGGCCTTTTACATC...TTTGAATAAACACCATTGTATGAACCTGCTGTAAGCTTGGGAGTGGTCTGTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375689.5
ENST00000542461.5
ENST00000646367.1
CDS-3UTR TCA 90 bp CACAACGAATATCAGAGAAGTGATGCCTATGGATGTAAAAGGCCAATGAACAAGGATGTAAAAGGCCAATaGACAAGATACTATGAAGGA +
Preference number: 4 (lower is better)
Translates to: HNEYQRSDAYGCKRPMNKDVKGQ*TRYYEG
Trigger: TCCTTCATAGTATCTTGTTCATTGGCCTTTTACATC...CTTGTTCATTGGCCTTTTACATCCATAGGCATCACTTCTCTGATATTCGTTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375689.5
ENST00000542461.5
ENST00000646367.1
CDS-3UTR GCA 90 bp ATTAGGAAGAGACGTTCATGTTCTCTGTACAATACATCCATTTACAGAATCAGCGTTTCTTCCCAAACCTaGCTGATGTCAAAAGTACGT +
Preference number: 4 (lower is better)
Translates to: IRKRRSCSLYNTSIYRISVSSQT*LMSKVR
Trigger: ACGTACTTTTGACATCAGGCAGGTTTGGGAAGAAAC...GCTGATTCTGTAAATGGATGTATTGTACAGAGAACATGAACGTCTCTTCCTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS CCA 90 bp CCTGTGGCTGGCTTCCGGAAGCCTCTCAGGAGCGGGGCAGGGTCCTaGGTGACCTCGGCCTGGCCACGAATAGCAGCGCTGCCCAGGGCC +
Preference number: 5 (lower is better)
Translates to: PVAGFRKPLRSGAGS*VTSAWPRIAALPRA
Trigger: GGCCCTGGGCAGCGCTGCTATTCGTGGCCAGGCCGAGGTCACCCAGGACCCTGCCCCGCTCCTGAGAGGCTTCCGGAAGCCAGCCACAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000555564.2
ENST00000613218.4
ENST00000619344.4
ENST00000620121.4
ENST00000647223.1
ENST00000651418.1
CDS TCA 90 bp GGACGGGCTGCCGCTCTCGCCATCGGCGTGGCAGCCCGAGAACCCTaGAGGCACAGCATTCCACTGGTCAAAAGTATCACCAAGCCGCGC +
Preference number: 5 (lower is better)
Translates to: GRAAALAIGVAAREP*RHSIPLVKSITKPR
Trigger: GCGCGGCTTGGTGATACTTTTGACCAGTGGAATGCTGTGCCTTCAGGGTTCTCGGGCTGCCACGCCGATGGCGAGAGCGGCAGCCCGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619344.4
ENST00000647223.1
CDS CCA 90 bp GGCCCCCTTTACAGGCAGAGAAATAAGTGCCACGCCACTCACCTGTaGCTGGCTTCCGGAAGCCTCTCAGGAGCGGGGCAGGGTCCTGGG +
Preference number: 5 (lower is better)
Translates to: GPLYRQRNKCHATHL*LASGSLSGAGQGPG
Trigger: CCCAGGACCCTGCCCCGCTCCTGAGAGGCTTCCGGAAGCCAGCCACAGGTGAGTGGCGTGGCACTTATTTCTCTGCCTGTAAAGGGGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647223.1
CDS-3UTR CAA 90 bp GTGACAGGTGGTGACCCTGGAGCCAGATCTGGAAGGCCTTCCTGGGGGCTGCCCGAGGACTGGACATGTTaGGGCCCCTGTTCCCGGTCT +
Preference number: 5 (lower is better)
Translates to: VTGGDPGARSGRPSWGLPEDWTC*GPCSRS
Trigger: AGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTC...GGGCAGCCCCCAGGAAGGCCTTCCAGATCTGGCTCCAGGGTCACCACCTGTCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS CCA 90 bp TGGGAATTCGGGACCCTCCAGGTCGGGTGCTGCAGAGGATGTGCCTaGCAGATGGGGACTGCTCAGCCCTGCTGGGTCAGTCTTAGCCTC +
Preference number: 5 (lower is better)
Translates to: WEFGTLQVGCCRGCA*QMGTAQPCWVSLSL
Trigger: GAGGCTAAGACTGACCCAGCAGGGCTGAGCAGTCCCCATCTGCCAGGCACATCCTCTGCAGCACCCGACCTGGAGGGTCCCGAATTCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000644168.1
ENST00000646985.1
ENST00000647223.1
ENST00000651418.1
CDS CCA 90 bp GGCAAGGCCTGGCATGGCTGGTCCCCAGTGGGAGCAACGGGGAGTTaGGAGGCATCTCCTAGCCCATCTGTGAGTCCAACTGTAGCCCTC +
Preference number: 5 (lower is better)
Translates to: GKAWHGWSPVGATGS*EASPSPSVSPTVAL
Trigger: GAGGGCTACAGTTGGACTCACAGATGGGCTAGGAGATGCCTCCCAACTCCCCGTTGCTCCCACTGGGGACCAGCCATGCCAGGCCTTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
ENST00000647223.1
CDS-3UTR CAA 90 bp CAGGTCCAGCCGGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCGAGCCCAGTCTTCCCTaGGAGTCTGTACCCCACCAG +
Preference number: 5 (lower is better)
Translates to: QVQPVTQQGIGQPGRSQVEPSLP*ESVPHQ
Trigger: CTGGTGGGGTACAGACTCCAAGGGAAGACTGGGCTC...GACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACCGGCTGGACCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CAA 90 bp CAGGTCCAGCCGGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCTGGAAGGTCCGAGAGTaGATCAGGGCACGGAGGTTG +
Preference number: 5 (lower is better)
Translates to: QVQPVTQQGIGQPGRSQVWKVRE*IRARRL
Trigger: CAACCTCCGTGCCCTGATCAACTCTCGGACCTTCCA...GACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACCGGCTGGACCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CAA 90 bp CCAGCCGGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCACGGATGGGCGGGACTTaGGGCTCCTCTTTAGTGGGC +
Preference number: 5 (lower is better)
Translates to: PAGDPTGHRATWQVTSQSRMGGT*GSSLVG
Trigger: GCCCACTAAAGAGGAGCCCAAAGTCCCGCCCATCCG...TGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACCGGCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS TCA 90 bp GGGATCTCAGCAGGAAGAGGCATCGGGTCCGCAGGCCTGGGGCGCTaGAGGGTTGCAGCCACATTCCCAGAGCCAAAAAGCTTCTTCCCT +
Preference number: 5 (lower is better)
Translates to: GISAGRGIGSAGLGR*RVAATFPEPKSFFP
Trigger: AGGGAAGAAGCTTTTTGGCTCTGGGAATGTGGCTGCAACCCTTCAGCGCCCCAGGCCTGCGGACCCGATGCCTCTTCCTGCTGAGATCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
ENST00000647223.1
CDS GCA 90 bp AGCAGGAAGAGGCATCGGGTCCGCAGGCCTGGGGCGCTGAAGGGTTaGAGCCACATTCCCAGAGCCAAAAAGCTTCTTCCCTTGGCCTGT +
Preference number: 5 (lower is better)
Translates to: SRKRHRVRRPGALKG*SHIPRAKKLLPLAC
Trigger: ACAGGCCAAGGGAAGAAGCTTTTTGGCTCTGGGAATGTGGCTGCAACCCTTCAGCGCCCCAGGCCTGCGGACCCGATGCCTCTTCCTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
ENST00000647223.1
CDS-3UTR CAA 90 bp GTGACAGGTGGTGACCCTGGAGCCAGATCTGGAAGGCCTTCCTGGGGGCTGCCCATCAGGGCACGGAGGTaGGTGTTGACAAGAATGGAC +
Preference number: 5 (lower is better)
Translates to: VTGGDPGARSGRPSWGLPIRARR*VLTRMD
Trigger: GTCCATTCTTGTCAACACCAACCTCCGTGCCCTGAT...GGGCAGCCCCCAGGAAGGCCTTCCAGATCTGGCTCCAGGGTCACCACCTGTCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CAA 90 bp GCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGTGCGAGGACTGGACATGTTaGGGCCCCTGTTCCCGGTCT +
Preference number: 5 (lower is better)
Translates to: AGAPAPWWAMPGVTLTLCEDWTC*GPCSRS
Trigger: AGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTC...GCACAGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS TCA 90 bp GCTACCCTGCAGCAACTGCATCACAAGTGGGTTAGTGGCCTCCACTaGGGACCCAGGCATGGACAGGCACACGGCTCTTGGCTGGTACTC +
Preference number: 5 (lower is better)
Translates to: ATLQQLHHKWVSGLH*GPRHGQAHGSWLVL
Trigger: GAGTACCAGCCAAGAGCCGTGTGCCTGTCCATGCCTGGGTCCTCAGTGGAGGCCACTAACCCACTTGTGATGCAGTTGCTGCAGGGTAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
ENST00000647223.1
CDS CCA 90 bp CAAGTTGTCTGGCTCAGCCTGGATCCGAGAAGCCACAGACTCAACTaGGAATTCGGGACCCTCCAGGTCGGGTGCTGCAGAGGATGTGCC +
Preference number: 5 (lower is better)
Translates to: QVVWLSLDPRSHRLN*EFGTLQVGCCRGCA
Trigger: GGCACATCCTCTGCAGCACCCGACCTGGAGGGTCCCGAATTCCCAGTTGAGTCTGTGGCTTCTCGGATCCAGGCTGAGCCAGACAACTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000644168.1
ENST00000646985.1
ENST00000647223.1
ENST00000651418.1
CDS CCA 90 bp AAACTGGAGGGATCTCAGCAGGAAGAGGCATCGGGTCCGCAGGCCTaGGGCGCTGAAGGGTTGCAGCCACATTCCCAGAGCCAAAAAGCT +
Preference number: 5 (lower is better)
Translates to: KLEGSQQEEASGPQA*GAEGLQPHSQSQKA
Trigger: AGCTTTTTGGCTCTGGGAATGTGGCTGCAACCCTTCAGCGCCCCAGGCCTGCGGACCCGATGCCTCTTCCTGCTGAGATCCCTCCAGTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
ENST00000647223.1
CDS CCA 90 bp CCATCGGCGTGGCAGCCCGAGAACCCTGAAGGCACAGCATTCCACTaGTCAAAAGTATCACCAAGCCGCGCCCATGGCTCTCAGACAAGC +
Preference number: 5 (lower is better)
Translates to: PSAWQPENPEGTAFH*SKVSPSRAHGSQTS
Trigger: GCTTGTCTGAGAGCCATGGGCGCGGCTTGGTGATACTTTTGACCAGTGGAATGCTGTGCCTTCAGGGTTCTCGGGCTGCCACGCCGATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000470145.3
ENST00000619344.4
ENST00000647223.1
CDS-3UTR CAA 90 bp GCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCCAACGGATGGGCGGGACTTaGGGCTCCTCTTTAGTGGGC +
Preference number: 5 (lower is better)
Translates to: AQWVIPRKPLQQDQKGRQRMGGT*GSSLVG
Trigger: GCCCACTAAAGAGGAGCCCAAAGTCCCGCCCATCCG...TTGGCGACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CAA 90 bp CAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGCGGATGGGCGGGACTTaGGGCTCCTCTTTAGTGGGC +
Preference number: 5 (lower is better)
Translates to: QGIGQPGRSQVNHFTLTSRMGGT*GSSLVG
Trigger: GCCCACTAAAGAGGAGCCCAAAGTCCCGCCCATCCG...CGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CAA 90 bp CAGGTCCAGCCGGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCATGTCACCATTCACCTaGGACAGTGGGGCAGATTGG +
Preference number: 5 (lower is better)
Translates to: QVQPVTQQGIGQPGRSQVMSPFT*DSGADW
Trigger: CCAATCTGCCCCACTGTCCAAGGTGAATGGTGACAT...GACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACCGGCTGGACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CAA 90 bp GTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGAGCCCAGTCTTCCCTaGGAGTCTGTACCCCACCAG +
Preference number: 5 (lower is better)
Translates to: VSRCTSPLVGNARSYFNPEPSLP*ESVPHQ
Trigger: CTGGTGGGGTACAGACTCCAAGGGAAGACTGGGCTC...AGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CAA 90 bp GGGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCTCAGGCTGGCTGGCCTaGGGCAGCCCAATGGGTTAT +
Preference number: 5 (lower is better)
Translates to: GQPNGLYPGNPSSKTRRVSGWLA*GSPMGY
Trigger: ATAACCCATTGGGCTGCCCAAGGCCAGCCAGCCTGA...GACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS CCA 90 bp ACATCAGCCGTGTCCTCTGGCTCCTCTCCCTCCACTGTAGCTGGATaGCGAGACCACTGCAGGGCATCCTTCTTGAGCGTGAAAAGGCTG +
Preference number: 5 (lower is better)
Translates to: TSAVSSGSSPSTVAG*RDHCRASFLSVKRL
Trigger: CAGCCTTTTCACGCTCAAGAAGGATGCCCTGCAGTGGTCTCGCCATCCAGCTACAGTGGAGGGAGAGGAGCCAGAGGACACGGCTGATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000470145.3
ENST00000613218.4
ENST00000620121.4
ENST00000643168.1
ENST00000646985.1
ENST00000651418.1
CDS CCA 90 bp CTCCACATCAGCCGTGTCCTCTGGCTCCTCTCCCTCCACTGTAGCTaGATGGCGAGACCACTGCAGGGCATCCTTCTTGAGCGTGAAAAG +
Preference number: 5 (lower is better)
Translates to: LHISRVLWLLSLHCS*MARPLQGILLEREK
Trigger: CTTTTCACGCTCAAGAAGGATGCCCTGCAGTGGTCTCGCCATCCAGCTACAGTGGAGGGAGAGGAGCCAGAGGACACGGCTGATGTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000470145.3
ENST00000613218.4
ENST00000620121.4
ENST00000643168.1
ENST00000646985.1
ENST00000651418.1
CDS CCA 90 bp CTGTCTGGAGATGCAGAGGCACGTGCCAAGTTGTCTGGCTCAGCCTaGATCCGAGAAGCCACAGACTCAACTGGGAATTCGGGACCCTCC +
Preference number: 5 (lower is better)
Translates to: LSGDAEARAKLSGSA*IREATDSTGNSGPS
Trigger: GGAGGGTCCCGAATTCCCAGTTGAGTCTGTGGCTTCTCGGATCCAGGCTGAGCCAGACAACTTGGCACGTGCCTCTGCATCTCCAGACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000644168.1
ENST00000646985.1
ENST00000647223.1
ENST00000651418.1
CDS CCA 90 bp GCCTCCACTGAGGACCCAGGCATGGACAGGCACACGGCTCTTGGCTaGTACTCAGTACTGGCCAGCAGTAGGGAATCTGGGATCTTTTGG +
Preference number: 5 (lower is better)
Translates to: ASTEDPGMDRHTALG*YSVLASSRESGIFW
Trigger: CCAAAAGATCCCAGATTCCCTACTGCTGGCCAGTACTGAGTACCAGCCAAGAGCCGTGTGCCTGTCCATGCCTGGGTCCTCAGTGGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
ENST00000647223.1
CDS CCA 90 bp ACACAGCAGAGCCCAGCACTAGAACCTATGGCAGGCCTCATCCATTaGCAGGGCTCTTGCCTGTGGCCCGACAGCTCTCCTAGTATCGCA +
Preference number: 5 (lower is better)
Translates to: TQQSPALEPMAGLIH*QGSCLWPDSSPSIA
Trigger: TGCGATACTAGGAGAGCTGTCGGGCCACAGGCAAGAGCCCTGCCAATGGATGAGGCCTGCCATAGGTTCTAGTGCTGGGCTCTGCTGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470145.3
ENST00000647223.1
CDS-3UTR CAA 90 bp GGGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCTGGAAGGTCCGAGAGTaGATCAGGGCACGGAGGTTG +
Preference number: 5 (lower is better)
Translates to: GQPNGLYPGNPSSKTRRVWKVRE*IRARRL
Trigger: CAACCTCCGTGCCCTGATCAACTCTCGGACCTTCCA...GACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CAA 90 bp GGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACACGGATGGGCGGGACTTaGGGCTCCTCTTTAGTGGGC +
Preference number: 5 (lower is better)
Translates to: GQPGRSQVNHFTLTSSSTRMGGT*GSSLVG
Trigger: GCCCACTAAAGAGGAGCCCAAAGTCCCGCCCATCCG...TGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CAA 90 bp CAGGTCCAGCCGGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCGGTAGGTTAACTCCCTaGGTGGAGAATGCAACCTTC +
Preference number: 5 (lower is better)
Translates to: QVQPVTQQGIGQPGRSQVGRLTP*VENATF
Trigger: GAAGGTTGCATTCTCCACCAAGGGAGTTAACCTACC...GACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACCGGCTGGACCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CAA 90 bp GTGACAGGTGGTGACCCTGGAGCCAGATCTGGAAGGCCTTCCTGGGGGCTGCCCGAACCAAGGTCAAACTaGCTCCGTCAACTGGCAAAT +
Preference number: 5 (lower is better)
Translates to: VTGGDPGARSGRPSWGLPEPRSN*LRQLAN
Trigger: ATTTGCCAGTTGACGGAGCAAGTTTGACCTTGGTTC...GGGCAGCCCCCAGGAAGGCCTTCCAGATCTGGCTCCAGGGTCACCACCTGTCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CAA 90 bp CAGGTCCAGCCGGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCCCCTGTTCCCGGTCTTaGGTAAACAGACGCTTAAGT +
Preference number: 5 (lower is better)
Translates to: QVQPVTQQGIGQPGRSQVPCSRS*VNRRLS
Trigger: ACTTAAGCGTCTGTTTACCAAAGACCGGGAACAGGG...GACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACCGGCTGGACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS GCA 90 bp GCTGGTGGAAGAACCTTCTCTAGGGGCAAGCTACCCTGCAGCAACTaGATCACAAGTGGGTTAGTGGCCTCCACTGAGGACCCAGGCATG +
Preference number: 5 (lower is better)
Translates to: AGGRTFSRGKLPCSN*ITSGLVASTEDPGM
Trigger: CATGCCTGGGTCCTCAGTGGAGGCCACTAACCCACTTGTGATGCAGTTGCTGCAGGGTAGCTTGCCCCTAGAGAAGGTTCTTCCACCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
ENST00000647223.1
CDS CCA 90 bp ACCCAGGCATGGACAGGCACACGGCTCTTGGCTGGTACTCAGTACTaGCCAGCAGTAGGGAATCTGGGATCTTTTGGCGGACCGCACATA +
Preference number: 5 (lower is better)
Translates to: TQAWTGTRLLAGTQY*PAVGNLGSFGGPHI
Trigger: TATGTGCGGTCCGCCAAAAGATCCCAGATTCCCTACTGCTGGCCAGTACTGAGTACCAGCCAAGAGCCGTGTGCCTGTCCATGCCTGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
ENST00000647223.1
CDS CCA 90 bp AGACATGGAGTTTGTGCTTGGTCCCAACTTCCCACTGGGAAAAACTaGAGGGATCTCAGCAGGAAGAGGCATCGGGTCCGCAGGCCTGGG +
Preference number: 5 (lower is better)
Translates to: RHGVCAWSQLPTGKN*RDLSRKRHRVRRPG
Trigger: CCCAGGCCTGCGGACCCGATGCCTCTTCCTGCTGAGATCCCTCCAGTTTTTCCCAGTGGGAAGTTGGGACCAAGCACAAACTCCATGTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
ENST00000647223.1
CDS CCA 90 bp ACATCAGCCGTGTCCTCTGGCTCCTCTCCCTCCACTGTAGCTGGATaGCGAGACCACTGCAGGGCATCCTTCTGTGACAGCAAGGTACAA +
Preference number: 5 (lower is better)
Translates to: TSAVSSGSSPSTVAG*RDHCRASFCDSKVQ
Trigger: TTGTACCTTGCTGTCACAGAAGGATGCCCTGCAGTGGTCTCGCCATCCAGCTACAGTGGAGGGAGAGGAGCCAGAGGACACGGCTGATGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644060.1
CDS-3UTR CAA 90 bp GTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTTCTGTTGCGCTTCATTaGACCTGTGGCTGGCTTCCG +
Preference number: 5 (lower is better)
Translates to: VSRCTSPLVGNARSYFNPSVALH*TCGWLP
Trigger: CGGAAGCCAGCCACAGGTCAAATGAAGCGCAACAGA...AGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
CDS-3UTR CAA 90 bp TCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGGCACGGAGGTTGGTGTaGACAAGAATGGACCCAGGT +
Preference number: 5 (lower is better)
Translates to: SAGAPAPWWAMPGVTLTLARRLV*TRMDPG
Trigger: ACCTGGGTCCATTCTTGTCAACACCAACCTCCGTGC...CAGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CAA 90 bp AGGTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCGCACGGAGGTTGGTGTaGACAAGAATGGACCCAGGT +
Preference number: 5 (lower is better)
Translates to: RSAGAPAPWWAMPGVTLTARRLV*TRMDPG
Trigger: ACCTGGGTCCATTCTTGTCAACACCAACCTCCGTGC...GGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CAA 90 bp AGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTAAACCGGATGGGCGGGACTTaGGGCTCCTCTTTAGTGGGC +
Preference number: 5 (lower is better)
Translates to: REEEDWTCLGPCSRSLVNRMGGT*GSSLVG
Trigger: GCCCACTAAAGAGGAGCCCAAAGTCCCGCCCATCCG...GTTTACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CAA 90 bp GCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCCAAACAGGCACACGGCTCTaGGCTGGTACTCAGTACTGG +
Preference number: 5 (lower is better)
Translates to: AQWVIPRKPLQQDQKGRQTGTRL*AGTQYW
Trigger: CCAGTACTGAGTACCAGCCAAGAGCCGTGTGCCTGT...TTGGCGACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CAA 90 bp CAGGTCCAGCCGGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAAACTTGGGACTGCCTaGCAATTCTTTTGGGGTGCT +
Preference number: 5 (lower is better)
Translates to: QVQPVTQQGIGQPGRSQVKLGTA*QFFWGA
Trigger: AGCACCCCAAAAGAATTGCAAGGCAGTCCCAAGTTT...GACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACCGGCTGGACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CAA 90 bp GTGACAGGTGGTGACCCTGGAGCCAGATCTGGAAGGCCTTCCTGGGGGCTGCCCCAAAGGAGATCACATTaGGAGATGAGAAACGAGGTG +
Preference number: 5 (lower is better)
Translates to: VTGGDPGARSGRPSWGLPQRRSH*EMRNEV
Trigger: CACCTCGTTTCTCATCTCCAAATGTGATCTCCTTTG...GGGCAGCCCCCAGGAAGGCCTTCCAGATCTGGCTCCAGGGTCACCACCTGTCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CAA 90 bp GGGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCCAAAGGCATGTGGCTTaGGAGCCCAGTCTTCCCTTG +
Preference number: 5 (lower is better)
Translates to: GQPNGLYPGNPSSKTRRVQRHVA*EPSLPL
Trigger: CAAGGGAAGACTGGGCTCCAAAGCCACATGCCTTTG...GACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CAA 90 bp GACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTTCAGGCTGGCTGGCCTaGGGCAGCCCAATGGGTTAT +
Preference number: 5 (lower is better)
Translates to: DPTGHRATWQVTSQSFHPSGWLA*GSPMGY
Trigger: ATAACCCATTGGGCTGCCCAAGGCCAGCCAGCCTGA...AGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS TCA 90 bp GCCCAGTCTGCGTTTCTCAAAGTGGGGTCCGTGAGCCACTGCGTTTaGATCACCTGGGAAGCTGGTGAAAGCGCAGATTCCCAGGCTCTA +
Preference number: 5 (lower is better)
Translates to: AQSAFLKVGSVSHCV*ITWEAGESADSQAL
Trigger: TAGAGCCTGGGAATCTGCGCTTTCACCAGCTTCCCAGGTGATTCAAACGCAGTGGCTCACGGACCCCACTTTGAGAAACGCAGACTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643168.1
ENST00000649901.1
CDS GCA 90 bp CTTCTGGCTCTGGTTCGGAGATCTGGCCGAGAGCGTTTCTTAAAATaGCCATCTCGCTGTCGGGTGGCTGGACCACGCTGTATACGCACT +
Preference number: 5 (lower is better)
Translates to: LLALVRRSGRERFLK*PSRCRVAGPRCIRT
Trigger: AGTGCGTATACAGCGTGGTCCAGCCACCCGACAGCGAGATGGGCATTTTAAGAAACGCTCTCGGCCAGATCTCCGAACCAGAGCCAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000644168.1
ENST00000646985.1
ENST00000647223.1
ENST00000651418.1
CDS GCA 90 bp TTCCTGAGGCAGGCTAGGAATTCTGTCTGGAGATGCAGAGGCACGTaGCAAGTTGTCTGGCTCAGCCTGGATCCGAGAAGCCACAGACTC +
Preference number: 5 (lower is better)
Translates to: FLRQARNSVWRCRGT*QVVWLSLDPRSHRL
Trigger: GAGTCTGTGGCTTCTCGGATCCAGGCTGAGCCAGACAACTTGGCACGTGCCTCTGCATCTCCAGACAGAATTCCTAGCCTGCCTCAGGAA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000644168.1
ENST00000646985.1
ENST00000647223.1
ENST00000651418.1
CDS GCA 90 bp TCATCGTGGGCTGGTGGAAGAACCTTCTCTAGGGGCAAGCTACCCTaGAGCAACTGCATCACAAGTGGGTTAGTGGCCTCCACTGAGGAC +
Preference number: 5 (lower is better)
Translates to: SSWAGGRTFSRGKLP*SNCITSGLVASTED
Trigger: GTCCTCAGTGGAGGCCACTAACCCACTTGTGATGCAGTTGCTGCAGGGTAGCTTGCCCCTAGAGAAGGTTCTTCCACCAGCCCACGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
ENST00000647223.1
CDS GCA 90 bp CCAGCACTAGAACCTATGGCAGGCCTCATCCATTGGCAGGGCTCTTaGCTGTGGCCCGACAGCTCTCCTAGTATCGCACTATTAGGTCAG +
Preference number: 5 (lower is better)
Translates to: PALEPMAGLIHWQGS*LWPDSSPSIALLGQ
Trigger: CTGACCTAATAGTGCGATACTAGGAGAGCTGTCGGGCCACAGGCAAGAGCCCTGCCAATGGATGAGGCCTGCCATAGGTTCTAGTGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470145.3
ENST00000647223.1
CDS-3UTR CAA 90 bp ATCAGCCGTGTCCTCTGGCTCCTCTCCCTCCACTGTAGCTGGATGGCGAGACCAGAATGTAGCATAGCATaGAGGCATGCGAGAGGGGAA +
Preference number: 5 (lower is better)
Translates to: ISRVLWLLSLHCSWMARPECSIA*RHARGE
Trigger: TTCCCCTCTCGCATGCCTCAATGCTATGCTACATTC...TGGTCTCGCCATCCAGCTACAGTGGAGGGAGAGGAGCCAGAGGACACGGCTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644587.1
CDS-3UTR CAA 90 bp GTGACAGGTGGTGACCCTGGAGCCAGATCTGGAAGGCCTTCCTGGGGGCTGCCCGTCTTTTTCTTTTGTTaGTTCGCCTGTGAGGAAGCT +
Preference number: 5 (lower is better)
Translates to: VTGGDPGARSGRPSWGLPVFFFC*FACEEA
Trigger: AGCTTCCTCACAGGCGAACAAACAAAAGAAAAAGAC...GGGCAGCCCCCAGGAAGGCCTTCCAGATCTGGCTCCAGGGTCACCACCTGTCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CAA 90 bp GGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGATCAGGGCACGGAGGTaGGTGTTGACAAGAATGGAC +
Preference number: 5 (lower is better)
Translates to: GSPMGYTQETPPARPEGSIRARR*VLTRMD
Trigger: GTCCATTCTTGTCAACACCAACCTCCGTGCCCTGAT...CGACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CAA 90 bp TCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGATCAGGGCACGGAGGTaGGTGTTGACAAGAATGGAC +
Preference number: 5 (lower is better)
Translates to: SAGAPAPWWAMPGVTLTLIRARR*VLTRMD
Trigger: GTCCATTCTTGTCAACACCAACCTCCGTGCCCTGAT...CAGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CAA 90 bp CAGAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTATGGAAGGTCCGAGAGTaGATCAGGGCACGGAGGTTG +
Preference number: 5 (lower is better)
Translates to: QREEEDWTCLGPCSRSLVWKVRE*IRARRL
Trigger: CAACCTCCGTGCCCTGATCAACTCTCGGACCTTCCA...TACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CAA 90 bp GAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTAAAGAGGCACGTGCCAAGTaGTCTGGCTCAGCCTGGATC +
Preference number: 5 (lower is better)
Translates to: EGRRGLDMFGPLFPVFGKEARAK*SGSAWI
Trigger: GATCCAGGCTGAGCCAGACAACTTGGCACGTGCCTC...TTTACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CAA 90 bp GAGAATGCAACCTTCTTGCTTCAGTTTCAAGTCCCTCTGGGAGTCAGGCAGTCCCGGATGGGCGGGACTTaGGGCTCCTCTTTAGTGGGC +
Preference number: 5 (lower is better)
Translates to: ENATFLLQFQVPLGVRQSRMGGT*GSSLVG
Trigger: GCCCACTAAAGAGGAGCCCAAAGTCCCGCCCATCCG...GGACTGCCTGACTCCCAGAGGGACTTGAAACTGAAGCAAGAAGGTTGCATTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CAA 90 bp GGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGATGTCACCATTCACCTaGGACAGTGGGGCAGATTGG +
Preference number: 5 (lower is better)
Translates to: GSPMGYTQETPPARPEGSMSPFT*DSGADW
Trigger: CCAATCTGCCCCACTGTCCAAGGTGAATGGTGACAT...CGACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CAA 90 bp GGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACAACAGGCACACGGCTCTaGGCTGGTACTCAGTACTGG +
Preference number: 5 (lower is better)
Translates to: GQPGRSQVNHFTLTSSSTTGTRL*AGTQYW
Trigger: CCAGTACTGAGTACCAGCCAAGAGCCGTGTGCCTGT...TGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CAA 90 bp CCAGCCGGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCAGGAGGGAGTCAAAACTaGGGACTGCCTTGCAATTCT +
Preference number: 5 (lower is better)
Translates to: PAGDPTGHRATWQVTSQSGGSQN*GLPCNS
Trigger: AGAATTGCAAGGCAGTCCCAAGTTTTGACTCCCTCC...TGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACCGGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CAA 90 bp GTGACAGGTGGTGACCCTGGAGCCAGATCTGGAAGGCCTTCCTGGGGGCTGCCCGAAGAGAACTGCTCTTaGGAATCCATTTCTTCCAGT +
Preference number: 5 (lower is better)
Translates to: VTGGDPGARSGRPSWGLPEENCS*ESISSS
Trigger: ACTGGAAGAAATGGATTCCAAAGAGCAGTTCTCTTC...GGGCAGCCCCCAGGAAGGCCTTCCAGATCTGGCTCCAGGGTCACCACCTGTCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CAA 90 bp GGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGACATGGAGTTTGTGCTaGGTCCCAACTTCCCACTGG +
Preference number: 5 (lower is better)
Translates to: GSPMGYTQETPPARPEGSTWSLC*VPTSHW
Trigger: CCAGTGGGAAGTTGGGACCAAGCACAAACTCCATGT...CGACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CAA 90 bp GCCTTGGGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAACAAAGGCATGTGGCTTaGGAGCCCAGTCTTCCCTTG +
Preference number: 5 (lower is better)
Translates to: ALGSPMGYTQETPPARPEQRHVA*EPSLPL
Trigger: CAAGGGAAGACTGGGCTCCAAAGCCACATGCCTTTG...TTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCCCAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CAA 90 bp CCAGCCGGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCAGCTGGTGGAACTCAGTaGGAGTTTAGAAAGCTTCCC +
Preference number: 5 (lower is better)
Translates to: PAGDPTGHRATWQVTSQSAGGTQ*EFRKLP
Trigger: GGGAAGCTTTCTAAACTCCAACTGAGTTCCACCAGC...TGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACCGGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CAA 90 bp GCCTTGGGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAACTTCCAGCAAGGCCTTaGGGAAAGGTGGGAGAGCTA +
Preference number: 5 (lower is better)
Translates to: ALGSPMGYTQETPPARPELPARP*GKVGEL
Trigger: TAGCTCTCCCACCTTTCCCAAAGGCCTTGCTGGAAG...TTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCCCAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CAA 90 bp CCAGCCGGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCAGGTAGGTTAACTCCCTaGGTGGAGAATGCAACCTTC +
Preference number: 5 (lower is better)
Translates to: PAGDPTGHRATWQVTSQSGRLTP*VENATF
Trigger: GAAGGTTGCATTCTCCACCAAGGGAGTTAACCTACC...TGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACCGGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CAA 90 bp GCCGGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTGGAGCAGGCATGGCTTaGTTTCTTCCCAAACCTGCC +
Preference number: 5 (lower is better)
Translates to: AGDPTGHRATWQVTSQSFGAGMA*FLPKPA
Trigger: GGCAGGTTTGGGAAGAAACAAAGCCATGCCTGCTCC...AAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACCGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CAA 90 bp GCCTTGGGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGAGCAGGCATGGCTTaGTTTCTTCCCAAACCTGCC +
Preference number: 5 (lower is better)
Translates to: ALGSPMGYTQETPPARPEGAGMA*FLPKPA
Trigger: GGCAGGTTTGGGAAGAAACAAAGCCATGCCTGCTCC...TTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCCCAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CAA 90 bp GGGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCCACAGGGGCATCTACTaGCTGGAAACATGTTGGGAG +
Preference number: 5 (lower is better)
Translates to: GQPNGLYPGNPSSKTRRVHRGIY*LETCWE
Trigger: CTCCCAACATGTTTCCAGCAAGTAGATGCCCCTGTG...GACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CAA 90 bp CCAGCCGGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCACCCTGTTCCCGGTCTTaGGTAAACAGACGCTTAAGT +
Preference number: 5 (lower is better)
Translates to: PAGDPTGHRATWQVTSQSPCSRS*VNRRLS
Trigger: ACTTAAGCGTCTGTTTACCAAAGACCGGGAACAGGG...TGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACCGGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CAA 90 bp CTTTCACATACACAGGTGCGTGGAGATGCCCACTCCCATAGGGTCCAAAGTGACGAGGACTGGACATGTTaGGGCCCCTGTTCCCGGTCT +
Preference number: 5 (lower is better)
Translates to: LSHTQVRGDAHSHRVQSDEDWTC*GPCSRS
Trigger: AGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTC...GTCACTTTGGACCCTATGGGAGTGGGCATCTCCACGCACCTGTGTATGTGAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS TCA 90 bp ATGCCCATCTCGCTGTCGGGTGGCTGGACCACGCTGTATACGCACTaGTTCTCCTGGGACACACAAGCCACTTTTGATTTCAGCCTCCTC +
Preference number: 5 (lower is better)
Translates to: MPISLSGGWTTLYTH*FSWDTQATFDFSLL
Trigger: GAGGAGGCTGAAATCAAAAGTGGCTTGTGTGTCCCAGGAGAATCAGTGCGTATACAGCGTGGTCCAGCCACCCGACAGCGAGATGGGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000644168.1
ENST00000646985.1
ENST00000647223.1
ENST00000651418.1
CDS TCA 90 bp TCTGAAGGCAAACAGCCCAGTCTGCGTTTCTCAAAGTGGGGTCCGTaGGCCACTGCGTTTGAATCACCTGGGAAGCTGGTGAAAGCGCAG +
Preference number: 5 (lower is better)
Translates to: SEGKQPSLRFSKWGP*ATAFESPGKLVKAQ
Trigger: CTGCGCTTTCACCAGCTTCCCAGGTGATTCAAACGCAGTGGCTCACGGACCCCACTTTGAGAAACGCAGACTGGGCTGTTTGCCTTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643168.1
ENST00000649901.1
CDS CCA 90 bp CATCTCCCACTAGAGACGGAATGGGACCATTGTCTGCAGGAACGGTaGGTCCTTGCTCCTCATCATCACTTTCCCAGGAAGTGGTGCCAG +
Preference number: 5 (lower is better)
Translates to: HLPLETEWDHCLQER*VLAPHHHFPRKWCQ
Trigger: CTGGCACCACTTCCTGGGAAAGTGATGATGAGGAGCAAGGACCCACCGTTCCTGCAGACAATGGTCCCATTCCGTCTCTAGTGGGAGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
ENST00000647223.1
CDS-3UTR CAA 90 bp GGGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGAATGTAGCATAGCATaGAGGCATGCGAGAGGGGAA +
Preference number: 5 (lower is better)
Translates to: GQPNGLYPGNPSSKTRRVECSIA*RHARGE
Trigger: TTCCCCTCTCGCATGCCTCAATGCTATGCTACATTC...GACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CAA 90 bp TCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGTGCAGGGCATCCTTCTaGAGCGTGAAAAGGCTGATT +
Preference number: 5 (lower is better)
Translates to: SAGAPAPWWAMPGVTLTLCRASF*SVKRLI
Trigger: AATCAGCCTTTTCACGCTCAAGAAGGATGCCCTGCA...CAGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CAA 90 bp GGGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCTGCAGGGCATCCTTCTaGAGCGTGAAAAGGCTGATT +
Preference number: 5 (lower is better)
Translates to: GQPNGLYPGNPSSKTRRVCRASF*SVKRLI
Trigger: AATCAGCCTTTTCACGCTCAAGAAGGATGCCCTGCA...GACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CAA 90 bp GGCTGCCCAGGGAACTCACCCATGAATCCAGAAGCACTTAACACTGGTGGTGGTTCTGTTGCGCTTCATTaGACCTGTGGCTGGCTTCCG +
Preference number: 5 (lower is better)
Translates to: GCPGNSPMNPEALNTGGGSVALH*TCGWLP
Trigger: CGGAAGCCAGCCACAGGTCAAATGAAGCGCAACAGA...ACCACCACCAGTGTTAAGTGCTTCTGGATTCATGGGTGAGTTCCCTGGGCAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000651418.1
CDS-3UTR CAA 90 bp TGTAGGAGGAGAGATGTGAAAAGCAAGATGCGTTTGCTCGGTGGCATGTGGGCAGAGGCACGTGCCAAGTaGTCTGGCTCAGCCTGGATC +
Preference number: 5 (lower is better)
Translates to: CRRRDVKSKMRLLGGMWAEARAK*SGSAWI
Trigger: GATCCAGGCTGAGCCAGACAACTTGGCACGTGCCTC...TGCCCACATGCCACCGAGCAAACGCATCTTGCTTTTCACATCTCTCCTCCTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CAA 90 bp GCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGTGCTTGGGTTTCTCATCCTaGTCCACCGAAGATCCCTTT +
Preference number: 5 (lower is better)
Translates to: AGAPAPWWAMPGVTLTLCLGFSS*STEDPF
Trigger: AAAGGGATCTTCGGTGGACAAGGATGAGAAACCCAA...GCACAGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CAA 90 bp AGGTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCGGAGGGAGTCAAAACTaGGGACTGCCTTGCAATTCT +
Preference number: 5 (lower is better)
Translates to: RSAGAPAPWWAMPGVTLTGGSQN*GLPCNS
Trigger: AGAATTGCAAGGCAGTCCCAAGTTTTGACTCCCTCC...GGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CAA 90 bp CAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGCACCAGACATGGAGTTaGTGCTTGGTCCCAACTTCC +
Preference number: 5 (lower is better)
Translates to: QGIGQPGRSQVNHFTLTSHQTWS*CLVPTS
Trigger: GGAAGTTGGGACCAAGCACAAACTCCATGTCTGGTG...CGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CAA 90 bp GCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCCAACACCAGACATGGAGTTaGTGCTTGGTCCCAACTTCC +
Preference number: 5 (lower is better)
Translates to: AQWVIPRKPLQQDQKGRQHQTWS*CLVPTS
Trigger: GGAAGTTGGGACCAAGCACAAACTCCATGTCTGGTG...TTGGCGACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CAA 90 bp AGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCCAAGTGACAGAGGGCTTTAGCGCACCAAAGTTTGCTTaGTGGCTCAGCTGCACCACA +
Preference number: 5 (lower is better)
Translates to: RKPLQQDQKGRQVTEGFSAPKFA*WLSCTT
Trigger: TGTGGTGCAGCTGAGCCACAAAGCAAACTTTGGTGC...GCTAAAGCCCTCTGTCACTTGGCGACCCTTCTGGTCTTGCTGGAGGGGTTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CAA 90 bp GGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACGGAGCAGGCATGGCTTaGTTTCTTCCCAAACCTGCC +
Preference number: 5 (lower is better)
Translates to: GDPTGHRATWQVTSQSFHGAGMA*FLPKPA
Trigger: GGCAGGTTTGGGAAGAAACAAAGCCATGCCTGCTCC...GTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CAA 90 bp GCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCCAACACAGGGGCATCTACTaGCTGGAAACATGTTGGGAG +
Preference number: 5 (lower is better)
Translates to: AQWVIPRKPLQQDQKGRQHRGIY*LETCWE
Trigger: CTCCCAACATGTTTCCAGCAAGTAGATGCCCCTGTG...TTGGCGACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS TCA 90 bp TTCCCAGAGCCAAAAAGCTTCTTCCCTTGGCCTGTAACATTGCTCTaGTCACCCAGGGCCCGACCTGTCTGCTCTGGACCAAAGGAGATC +
Preference number: 5 (lower is better)
Translates to: FPEPKSFFPWPVTLL*SPRARPVCSGPKEI
Trigger: GATCTCCTTTGGTCCAGAGCAGACAGGTCGGGCCCTGGGTGATCAGAGCAATGTTACAGGCCAAGGGAAGAAGCTTTTTGGCTCTGGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
ENST00000647223.1
CDS GCA 90 bp GGGCATGAGCCACCAAGCCCTAATTCGTCATCAAATGCTCTGTTCTaGAGGCAATCAGTCGGTGAGGATTCAGGTGTGGAACTGGGGGTC +
Preference number: 5 (lower is better)
Translates to: GHEPPSPNSSSNALF*RQSVGEDSGVELGV
Trigger: GACCCCCAGTTCCACACCTGAATCCTCACCGACTGATTGCCTGCAGAACAGAGCATTTGATGACGAATTAGGGCTTGGTGGCTCATGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
ENST00000647223.1
CDS GCA 90 bp CCCAGTCTTCCCTTGGAGTCTGTACCCCACCAGACATGGAGTTTGTaGTTGGTCCCAACTTCCCACTGGGAAAAACTGGAGGGATCTCAG +
Preference number: 5 (lower is better)
Translates to: PSLPLESVPHQTWSL*LVPTSHWEKLEGSQ
Trigger: CTGAGATCCCTCCAGTTTTTCCCAGTGGGAAGTTGGGACCAAGCACAAACTCCATGTCTGGTGGGGTACAGACTCCAAGGGAAGACTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
ENST00000647223.1
CDS GCA 90 bp AGTGATGCACTGTGGCTCGCACCAAAGTTTGCTTTGTGGCTCAGCTaGACCACACTTCCAGCAAGGCCTTTGGGAAAGGTGGGAGAGCTA +
Preference number: 5 (lower is better)
Translates to: SDALWLAPKFALWLS*TTLPARPLGKVGEL
Trigger: TAGCTCTCCCACCTTTCCCAAAGGCCTTGCTGGAAGTGTGGTGCAGCTGAGCCACAAAGCAAACTTTGGTGCGAGCCACAGTGCATCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
ENST00000647223.1
CDS CCA 90 bp GCTAGGAATTCTGTCTGGAGATGCAGAGGCACGTGCCAAGTTGTCTaGCTCAGCCTGGATCCGAGAAGCCACAGACTCAACTGGGAATTC +
Preference number: 5 (lower is better)
Translates to: ARNSVWRCRGTCQVV*LSLDPRSHRLNWEF
Trigger: GAATTCCCAGTTGAGTCTGTGGCTTCTCGGATCCAGGCTGAGCCAGACAACTTGGCACGTGCCTCTGCATCTCCAGACAGAATTCCTAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000644168.1
ENST00000646985.1
ENST00000647223.1
ENST00000651418.1
CDS CCA 90 bp GTCTTCCCTTGGAGTCTGTACCCCACCAGACATGGAGTTTGTGCTTaGTCCCAACTTCCCACTGGGAAAAACTGGAGGGATCTCAGCAGG +
Preference number: 5 (lower is better)
Translates to: VFPWSLYPTRHGVCA*SQLPTGKNWRDLSR
Trigger: CCTGCTGAGATCCCTCCAGTTTTTCCCAGTGGGAAGTTGGGACCAAGCACAAACTCCATGTCTGGTGGGGTACAGACTCCAAGGGAAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
ENST00000647223.1
CDS CCA 90 bp GCTTTGGAGCCCAGTCTTCCCTTGGAGTCTGTACCCCACCAGACATaGAGTTTGTGCTTGGTCCCAACTTCCCACTGGGAAAAACTGGAG +
Preference number: 5 (lower is better)
Translates to: ALEPSLPLESVPHQT*SLCLVPTSHWEKLE
Trigger: CTCCAGTTTTTCCCAGTGGGAAGTTGGGACCAAGCACAAACTCCATGTCTGGTGGGGTACAGACTCCAAGGGAAGACTGGGCTCCAAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
ENST00000647223.1
CDS-3UTR CAA 90 bp CAGATTCCACGTGGGCCCCGTTTACCTTCAGAGGAGTCAGGACAACTCGAGGCACCTGCAGAATCTGTTTaGGTGTCATTGGAGCATCCG +
Preference number: 5 (lower is better)
Translates to: QIPRGPRLPSEESGQLEAPAESV*VSLEHP
Trigger: CGGATGCTCCAATGACACCAAAACAGATTCTGCAGG...TGCCTCGAGTTGTCCTGACTCCTCTGAAGGTAAACGGGGCCCACGTGGAATCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644587.1
CDS-3UTR CAA 90 bp TCAGCCGTGTCCTCTGGCTCCTCTCCCTCCACTGTAGCTGGATGGCGAGACCACTCTCCTCCTCTTGAATaGGAATGTAGCATAGCATTG +
Preference number: 5 (lower is better)
Translates to: SAVSSGSSPSTVAGWRDHSPPLE*ECSIAL
Trigger: CAATGCTATGCTACATTCCAATTCAAGAGGAGGAGA...GTGGTCTCGCCATCCAGCTACAGTGGAGGGAGAGGAGCCAGAGGACACGGCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644587.1
CDS-3UTR CAA 90 bp CTTTCACATACACAGGTGCGTGGAGATGCCCACTCCCATAGGGTCCAAAGTGACTCTGTTGCGCTTCATTaGACCTGTGGCTGGCTTCCG +
Preference number: 5 (lower is better)
Translates to: LSHTQVRGDAHSHRVQSDSVALH*TCGWLP
Trigger: CGGAAGCCAGCCACAGGTCAAATGAAGCGCAACAGA...GTCACTTTGGACCCTATGGGAGTGGGCATCTCCACGCACCTGTGTATGTGAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
CDS-3UTR CAA 90 bp AGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTAAACTCTGTTGCGCTTCATTaGACCTGTGGCTGGCTTCCG +
Preference number: 5 (lower is better)
Translates to: REEEDWTCLGPCSRSLVNSVALH*TCGWLP
Trigger: CGGAAGCCAGCCACAGGTCAAATGAAGCGCAACAGA...GTTTACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000651418.1
CDS-3UTR CAA 90 bp CAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACAGCAGCACGGAGGTTGGTGTaGACAAGAATGGACCCAGGT +
Preference number: 5 (lower is better)
Translates to: QPGRSQVNHFTLTSSSTAARRLV*TRMDPG
Trigger: ACCTGGGTCCATTCTTGTCAACACCAACCTCCGTGC...TGCTGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CAA 90 bp GGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACAATCAGGGCACGGAGGTaGGTGTTGACAAGAATGGAC +
Preference number: 5 (lower is better)
Translates to: GQPGRSQVNHFTLTSSSTIRARR*VLTRMD
Trigger: GTCCATTCTTGTCAACACCAACCTCCGTGCCCTGAT...TGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CAA 90 bp TGTAGGAGGAGAGATGTGAAAAGCAAGATGCGTTTGCTCGGTGGCATGTGGGCATGGAAGGTCCGAGAGTaGATCAGGGCACGGAGGTTG +
Preference number: 5 (lower is better)
Translates to: CRRRDVKSKMRLLGGMWAWKVRE*IRARRL
Trigger: CAACCTCCGTGCCCTGATCAACTCTCGGACCTTCCA...TGCCCACATGCCACCGAGCAAACGCATCTTGCTTTTCACATCTCTCCTCCTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CAA 90 bp CCAGCAGAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTACACACAAGCCACTTTaGATTTCAGCCTCCTCCTGG +
Preference number: 5 (lower is better)
Translates to: PAEGRRGLDMFGPLFPVFTHKPL*ISASSW
Trigger: CCAGGAGGAGGCTGAAATCAAAAGTGGCTTGTGTGT...AAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTCTGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CAA 90 bp CTTGGTGGAGAATGCAACCTTCTTGCTTCAGTTTCAAGTCCCTCTGGGAGTCAGGAGGCACGTGCCAAGTaGTCTGGCTCAGCCTGGATC +
Preference number: 5 (lower is better)
Translates to: LGGECNLLASVSSPSGSQEARAK*SGSAWI
Trigger: GATCCAGGCTGAGCCAGACAACTTGGCACGTGCCTC...CTGACTCCCAGAGGGACTTGAAACTGAAGCAAGAAGGTTGCATTCTCCACCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CAA 90 bp CAAGGCAAGGGAAAACACACACAGGGGCATCTACTTGCTGGAAACATGTTGGGAGAGGCACGTGCCAAGTaGTCTGGCTCAGCCTGGATC +
Preference number: 5 (lower is better)
Translates to: QGKGKHTQGHLLAGNMLGEARAK*SGSAWI
Trigger: GATCCAGGCTGAGCCAGACAACTTGGCACGTGCCTC...TCCCAACATGTTTCCAGCAAGTAGATGCCCCTGTGTGTGTTTTCCCTTGCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CAA 90 bp GGCTGCCCAGGGAACTCACCCATGAATCCAGAAGCACTTAACACTGGTGGTGGTAGGAACGGTGGGTCCTaGCTCCTCATCATCACTTTC +
Preference number: 5 (lower is better)
Translates to: GCPGNSPMNPEALNTGGGRNGGS*LLIITF
Trigger: GAAAGTGATGATGAGGAGCAAGGACCCACCGTTCCT...ACCACCACCAGTGTTAAGTGCTTCTGGATTCATGGGTGAGTTCCCTGGGCAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CAA 90 bp GTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTTCTCTGGATTCTGGTTaGGGCTGTTTCACTACCTCA +
Preference number: 5 (lower is better)
Translates to: VSRCTSPLVGNARSYFNPSLDSG*GCFTTS
Trigger: TGAGGTAGTGAAACAGCCCAAACCAGAATCCAGAGA...AGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CAA 90 bp AGGTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCTTGGGTTTCTCATCCTaGTCCACCGAAGATCCCTTT +
Preference number: 5 (lower is better)
Translates to: RSAGAPAPWWAMPGVTLTLGFSS*STEDPF
Trigger: AAAGGGATCTTCGGTGGACAAGGATGAGAAACCCAA...GGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CAA 90 bp GGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACAGGACAGTGGGGCAGATaGGTTCCAATTGGGTTTCTC +
Preference number: 5 (lower is better)
Translates to: GQPGRSQVNHFTLTSSSTGQWGR*VPIGFL
Trigger: GAGAAACCCAATTGGAACCAATCTGCCCCACTGTCC...TGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CAA 90 bp CAGAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTAATGTCACCATTCACCTaGGACAGTGGGGCAGATTGG +
Preference number: 5 (lower is better)
Translates to: QREEEDWTCLGPCSRSLVMSPFT*DSGADW
Trigger: CCAATCTGCCCCACTGTCCAAGGTGAATGGTGACAT...TACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CAA 90 bp CTTTCACATACACAGGTGCGTGGAGATGCCCACTCCCATAGGGTCCAAAGTGACTGCCTTGCAATTCTTTaGGGGTGCTCCAGGAGCCTG +
Preference number: 5 (lower is better)
Translates to: LSHTQVRGDAHSHRVQSDCLAIL*GCSRSL
Trigger: CAGGCTCCTGGAGCACCCCAAAAGAATTGCAAGGCA...GTCACTTTGGACCCTATGGGAGTGGGCATCTCCACGCACCTGTGTATGTGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CAA 90 bp GTCAAAAGTACGTCAAAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGGTTGCCTTGCAATTCTTTaGGGGTGCTCCAGGAGCCTG +
Preference number: 5 (lower is better)
Translates to: VKSTSKGASQSQESMVPGCLAIL*GCSRSL
Trigger: CAGGCTCCTGGAGCACCCCAAAAGAATTGCAAGGCA...ACCTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTTTGACGTACTTTTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CAA 90 bp GCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCCAAGGAGGGAGTCAAAACTaGGGACTGCCTTGCAATTCT +
Preference number: 5 (lower is better)
Translates to: AQWVIPRKPLQQDQKGRQGGSQN*GLPCNS
Trigger: AGAATTGCAAGGCAGTCCCAAGTTTTGACTCCCTCC...TTGGCGACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CAA 90 bp GGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACACATGGAGTTTGTGCTaGGTCCCAACTTCCCACTGG +
Preference number: 5 (lower is better)
Translates to: GDPTGHRATWQVTSQSFHTWSLC*VPTSHW
Trigger: CCAGTGGGAAGTTGGGACCAAGCACAAACTCCATGT...GTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CAA 90 bp AAAAGTACGTCAAAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGGTATTGAGCCCAGTCTTCCCTaGGAGTCTGTACCCCACCAG +
Preference number: 5 (lower is better)
Translates to: KSTSKGASQSQESMVPGIEPSLP*ESVPHQ
Trigger: CTGGTGGGGTACAGACTCCAAGGGAAGACTGGGCTC...AATACCTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTTTGACGTACTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CAA 90 bp GCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCCAAGCTGGTGGAACTCAGTaGGAGTTTAGAAAGCTTCCC +
Preference number: 5 (lower is better)
Translates to: AQWVIPRKPLQQDQKGRQAGGTQ*EFRKLP
Trigger: GGGAAGCTTTCTAAACTCCAACTGAGTTCCACCAGC...TTGGCGACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CAA 90 bp ACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCTGCCTATCAGGCTGGCTGGCCTaGGGCAGCCCAATGGGTTAT +
Preference number: 5 (lower is better)
Translates to: TEGFSSVNFGGRQECSCLSGWLA*GSPMGY
Trigger: ATAACCCATTGGGCTGCCCAAGGCCAGCCAGCCTGA...TAGGCAGGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CAA 90 bp AGGTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCTATTCCCCAACCCCATaGTCCAAGCAGAGCTATTCA +
Preference number: 5 (lower is better)
Translates to: RSAGAPAPWWAMPGVTLTYSPTP*SKQSYS
Trigger: TGAATAGCTCTGCTTGGACAATGGGGTTGGGGAATA...GGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CAA 90 bp AAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGGTATTGCTGTGACAGGTAAAAGCAAGATGCGTTaGCTCGGTGGCATGTGGGCA +
Preference number: 5 (lower is better)
Translates to: KGASQSQESMVPGIAVTGKSKMR*LGGMWA
Trigger: TGCCCACATGCCACCGAGCAAACGCATCTTGCTTTT...ACCTGTCACAGCAATACCTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CAA 90 bp CCAGCAGAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTACTGGTGGTGGTGATTaGTCACATATGGCAGCAAGC +
Preference number: 5 (lower is better)
Translates to: PAEGRRGLDMFGPLFPVFTGGGD*SHMAAS
Trigger: GCTTGCTGCCATATGTGACAAATCACCACCACCAGT...AAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTCTGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CAA 90 bp GCCTTGGGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAACTGGTGGTGGTGATTaGTCACATATGGCAGCAAGC +
Preference number: 5 (lower is better)
Translates to: ALGSPMGYTQETPPARPETGGGD*SHMAAS
Trigger: GCTTGCTGCCATATGTGACAAATCACCACCACCAGT...TTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCCCAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CAA 90 bp CAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACAGCAGGAGCAGGCATGGCTTaGTTTCTTCCCAAACCTGCC +
Preference number: 5 (lower is better)
Translates to: QPGRSQVNHFTLTSSSTAGAGMA*FLPKPA
Trigger: GGCAGGTTTGGGAAGAAACAAAGCCATGCCTGCTCC...TGCTGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CAA 90 bp CAGAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTACACAGGGGCATCTACTaGCTGGAAACATGTTGGGAG +
Preference number: 5 (lower is better)
Translates to: QREEEDWTCLGPCSRSLVHRGIY*LETCWE
Trigger: CTCCCAACATGTTTCCAGCAAGTAGATGCCCCTGTG...TACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CAA 90 bp GCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGTGCAAACAGACGCTTAAGTaGACAACTTGGACTTGGCCA +
Preference number: 5 (lower is better)
Translates to: AGAPAPWWAMPGVTLTLCKQTLK*TTWTWP
Trigger: TGGCCAAGTCCAAGTTGTCAACTTAAGCGTCTGTTT...GCACAGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CAA 90 bp CTTCCTGGGGGCTGCCCAGGGAACTCACCCATGAATCCAGAAGCACTTAACACTATGCCATTGGCGTCCTaGAATGTGGGGTCGCTTTTC +
Preference number: 5 (lower is better)
Translates to: LPGGCPGNSPMNPEALNTMPLAS*NVGSLF
Trigger: GAAAAGCGACCCCACATTCAAGGACGCCAATGGCAT...AGTGTTAAGTGCTTCTGGATTCATGGGTGAGTTCCCTGGGCAGCCCCCAGGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000646985.1
CDS-3UTR CAA 90 bp ACCTGTAATCCATCCCAGTGCTTTGTGAAGCTGTGGTGGGAAGATCACTTGAGGGCTGGGAGTAAGCACTaGCTTCCCTCCACGCACCTG +
Preference number: 5 (lower is better)
Translates to: TCNPSQCFVKLWWEDHLRAGSKH*LPSTHL
Trigger: CAGGTGCGTGGAGGGAAGCAAGTGCTTACTCCCAGC...CCTCAAGTGATCTTCCCACCACAGCTTCACAAAGCACTGGGATGGATTACAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649901.1
CDS TCA 90 bp TGCACGCACACTGGAGCGAGATGCTTTCCACCGTGCTGCTGTCAGTaGACATTTGCAAGGAAAGTGATGCACTGTGGCTCGCACCAAAGT +
Preference number: 5 (lower is better)
Translates to: CTHTGARCFPPCCCQ*TFARKVMHCGSHQS
Trigger: ACTTTGGTGCGAGCCACAGTGCATCACTTTCCTTGCAAATGTTCACTGACAGCAGCACGGTGGAAAGCATCTCGCTCCAGTGTGCGTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
ENST00000647223.1
CDS TCA 90 bp GAGAGCCGTGGCAGCCCAGAAGAGGGGCACCTAACTTCAATGAGTTaGGCGAAAGACGGCATGGAGGTGAATAACGATCAGGGAAGTAAC +
Preference number: 5 (lower is better)
Translates to: ESRGSPEEGHLTSMS*AKDGMEVNNDQGSN
Trigger: GTTACTTCCCTGATCGTTATTCACCTCCATGCCGTCTTTCGCTCAACTCATTGAAGTTAGGTGCCCCTCTTCTGGGCTGCCACGGCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644060.1
CDS GCA 90 bp ACTAGAGACGGAATGGGACCATTGTCTGCAGGAACGGTGGGTCCTTaGTCCTCATCATCACTTTCCCAGGAAGTGGTGCCAGACTCACAT +
Preference number: 5 (lower is better)
Translates to: TRDGMGPLSAGTVGP*SSSSLSQEVVPDSH
Trigger: ATGTGAGTCTGGCACCACTTCCTGGGAAAGTGATGATGAGGAGCAAGGACCCACCGTTCCTGCAGACAATGGTCCCATTCCGTCTCTAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
ENST00000647223.1
CDS CCA 90 bp GGGAGCAGCTTTCTCCCACTCCTCTCCAACCTGGGGCTCAACAGATaGTATGTGTTCTCTGGATTCTGGTTTGGGCTGTTTCACTACCTC +
Preference number: 5 (lower is better)
Translates to: GSSFLPLLSNLGLNR*YVFSGFWFGLFHYL
Trigger: GAGGTAGTGAAACAGCCCAAACCAGAATCCAGAGAACACATACCATCTGTTGAGCCCCAGGTTGGAGAGGAGTGGGAGAAAGCTGCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
ENST00000647223.1
CDS CCA 90 bp TGCAAGGAAAGTGATGCACTGTGGCTCGCACCAAAGTTTGCTTTGTaGCTCAGCTGCACCACACTTCCAGCAAGGCCTTTGGGAAAGGTG +
Preference number: 5 (lower is better)
Translates to: CKESDALWLAPKFAL*LSCTTLPARPLGKV
Trigger: CACCTTTCCCAAAGGCCTTGCTGGAAGTGTGGTGCAGCTGAGCCACAAAGCAAACTTTGGTGCGAGCCACAGTGCATCACTTTCCTTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
ENST00000647223.1
CDS-3UTR CAA 90 bp CTTCCTGGGGGCTGCCCAGGGAACTCACCCATGAATCCAGAAGCACTTAACACTCCTGCAGAATCTGTTTaGGTGTCATTGGAGCATCCG +
Preference number: 5 (lower is better)
Translates to: LPGGCPGNSPMNPEALNTPAESV*VSLEHP
Trigger: CGGATGCTCCAATGACACCAAAACAGATTCTGCAGG...AGTGTTAAGTGCTTCTGGATTCATGGGTGAGTTCCCTGGGCAGCCCCCAGGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CAA 90 bp AAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGGTATTGCTGTGACAGGTGAATGTAGCATAGCATaGAGGCATGCGAGAGGGGAA +
Preference number: 5 (lower is better)
Translates to: KGASQSQESMVPGIAVTGECSIA*RHARGE
Trigger: TTCCCCTCTCGCATGCCTCAATGCTATGCTACATTC...ACCTGTCACAGCAATACCTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CAA 90 bp ATGTCAAAAGTACGTCAAAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGGCACGGAGGTTGGTGTaGACAAGAATGGACCCAGGT +
Preference number: 5 (lower is better)
Translates to: MSKVRQKEPHSPRRAWSQARRLV*TRMDPG
Trigger: ACCTGGGTCCATTCTTGTCAACACCAACCTCCGTGC...CTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTTTGACGTACTTTTGACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CAA 90 bp GAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTAAAATCAGGGCACGGAGGTaGGTGTTGACAAGAATGGAC +
Preference number: 5 (lower is better)
Translates to: EGRRGLDMFGPLFPVFGKIRARR*VLTRMD
Trigger: GTCCATTCTTGTCAACACCAACCTCCGTGCCCTGAT...TTTACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CAA 90 bp CTTCCTGGGGGCTGCCCAGGGAACTCACCCATGAATCCAGAAGCACTTAACACTACACACAAGCCACTTTaGATTTCAGCCTCCTCCTGG +
Preference number: 5 (lower is better)
Translates to: LPGGCPGNSPMNPEALNTTHKPL*ISASSW
Trigger: CCAGGAGGAGGCTGAAATCAAAAGTGGCTTGTGTGT...AGTGTTAAGTGCTTCTGGATTCATGGGTGAGTTCCCTGGGCAGCCCCCAGGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CAA 90 bp CCAGCAGAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTTCTCTGGATTCTGGTTaGGGCTGTTTCACTACCTCA +
Preference number: 5 (lower is better)
Translates to: PAEGRRGLDMFGPLFPVFSLDSG*GCFTTS
Trigger: TGAGGTAGTGAAACAGCCCAAACCAGAATCCAGAGA...AAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTCTGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CAA 90 bp GTGACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCTGCGGAATCTGGGATCTTTaGGCGGACCGCACATACTCG +
Preference number: 5 (lower is better)
Translates to: VTEGFSSVNFGGRQECSCGIWDL*ADRTYS
Trigger: CGAGTATGTGCGGTCCGCCAAAAGATCCCAGATTCC...GCAGGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGTCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CAA 90 bp CAAGGCAAGGGAAAACACACACAGGGGCATCTACTTGCTGGAAACATGTTGGGAACAGGCACACGGCTCTaGGCTGGTACTCAGTACTGG +
Preference number: 5 (lower is better)
Translates to: QGKGKHTQGHLLAGNMLGTGTRL*AGTQYW
Trigger: CCAGTACTGAGTACCAGCCAAGAGCCGTGTGCCTGT...TCCCAACATGTTTCCAGCAAGTAGATGCCCCTGTGTGTGTTTTCCCTTGCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CAA 90 bp CTTGGTGGAGAATGCAACCTTCTTGCTTCAGTTTCAAGTCCCTCTGGGAGTCAGACAGGCACACGGCTCTaGGCTGGTACTCAGTACTGG +
Preference number: 5 (lower is better)
Translates to: LGGECNLLASVSSPSGSQTGTRL*AGTQYW
Trigger: CCAGTACTGAGTACCAGCCAAGAGCCGTGTGCCTGT...CTGACTCCCAGAGGGACTTGAAACTGAAGCAAGAAGGTTGCATTCTCCACCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CAA 90 bp AGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCCAAGTGACAGAGGGCTTTAGCAAACTTGGGACTGCCTaGCAATTCTTTTGGGGTGCT +
Preference number: 5 (lower is better)
Translates to: RKPLQQDQKGRQVTEGFSKLGTA*QFFWGA
Trigger: AGCACCCCAAAAGAATTGCAAGGCAGTCCCAAGTTT...GCTAAAGCCCTCTGTCACTTGGCGACCCTTCTGGTCTTGCTGGAGGGGTTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CAA 90 bp CAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAAACTTGGGACTGCCTaGCAATTCTTTTGGGGTGCT +
Preference number: 5 (lower is better)
Translates to: QGIGQPGRSQVNHFTLTSKLGTA*QFFWGA
Trigger: AGCACCCCAAAAGAATTGCAAGGCAGTCCCAAGTTT...CGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CAA 90 bp GGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACAGGAGGGAGTCAAAACTaGGGACTGCCTTGCAATTCT +
Preference number: 5 (lower is better)
Translates to: GQPGRSQVNHFTLTSSSTGGSQN*GLPCNS
Trigger: AGAATTGCAAGGCAGTCCCAAGTTTTGACTCCCTCC...TGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CAA 90 bp CCAGCCGGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCAGAAGAGAACTGCTCTTaGGAATCCATTTCTTCCAGT +
Preference number: 5 (lower is better)
Translates to: PAGDPTGHRATWQVTSQSEENCS*ESISSS
Trigger: ACTGGAAGAAATGGATTCCAAAGAGCAGTTCTCTTC...TGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACCGGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CAA 90 bp TCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGTTCCTGGAGCAGCATTaGAATTACTGTCCTGTGACA +
Preference number: 5 (lower is better)
Translates to: SAGAPAPWWAMPGVTLTLFLEQH*NYCPVT
Trigger: TGTCACAGGACAGTAATTCAAATGCTGCTCCAGGAA...CAGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CAA 90 bp TCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGCAAAGGAGATCACATTaGGAGATGAGAAACGAGGTG +
Preference number: 5 (lower is better)
Translates to: SAGAPAPWWAMPGVTLTLQRRSH*EMRNEV
Trigger: CACCTCGTTTCTCATCTCCAAATGTGATCTCCTTTG...CAGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CAA 90 bp GGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCAAAGGAGATCACATTaGGAGATGAGAAACGAGGTG +
Preference number: 5 (lower is better)
Translates to: GSPMGYTQETPPARPEGSQRRSH*EMRNEV
Trigger: CACCTCGTTTCTCATCTCCAAATGTGATCTCCTTTG...CGACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CAA 90 bp TCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGAAAAAGCTTCTTCCCTaGGCCTGTAACATTGCTCTG +
Preference number: 5 (lower is better)
Translates to: SAGAPAPWWAMPGVTLTLKKLLP*ACNIAL
Trigger: CAGAGCAATGTTACAGGCCAAGGGAAGAAGCTTTTT...CAGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CAA 90 bp GGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACAGCACTCAGTCACCAGACATGGAGTTaGTGCTTGGTCCCAACTTCC +
Preference number: 5 (lower is better)
Translates to: GRSQVNHFTLTSSSTALSHQTWS*CLVPTS
Trigger: GGAAGTTGGGACCAAGCACAAACTCCATGTCTGGTG...ACTGAGTGCTGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CAA 90 bp TGTAGGAGGAGAGATGTGAAAAGCAAGATGCGTTTGCTCGGTGGCATGTGGGCACAAAGGCATGTGGCTTaGGAGCCCAGTCTTCCCTTG +
Preference number: 5 (lower is better)
Translates to: CRRRDVKSKMRLLGGMWAQRHVA*EPSLPL
Trigger: CAAGGGAAGACTGGGCTCCAAAGCCACATGCCTTTG...TGCCCACATGCCACCGAGCAAACGCATCTTGCTTTTCACATCTCTCCTCCTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CAA 90 bp AAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGGTATTGCTGTGACAGGTGCTGGTGGAACTCAGTaGGAGTTTAGAAAGCTTCCC +
Preference number: 5 (lower is better)
Translates to: KGASQSQESMVPGIAVTGAGGTQ*EFRKLP
Trigger: GGGAAGCTTTCTAAACTCCAACTGAGTTCCACCAGC...ACCTGTCACAGCAATACCTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CAA 90 bp GTGACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCTGCCTTCCAGCAAGGCCTTaGGGAAAGGTGGGAGAGCTA +
Preference number: 5 (lower is better)
Translates to: VTEGFSSVNFGGRQECSCLPARP*GKVGEL
Trigger: TAGCTCTCCCACCTTTCCCAAAGGCCTTGCTGGAAG...GCAGGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGTCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CAA 90 bp AGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTAAACAAAAGCAAGATGCGTTaGCTCGGTGGCATGTGGGCA +
Preference number: 5 (lower is better)
Translates to: REEEDWTCLGPCSRSLVNKSKMR*LGGMWA
Trigger: TGCCCACATGCCACCGAGCAAACGCATCTTGCTTTT...GTTTACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CAA 90 bp CCAGCCGGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCAGGTTGTACGGGTTTATaGTTCCAATACCACAAGAGA +
Preference number: 5 (lower is better)
Translates to: PAGDPTGHRATWQVTSQSGCTGL*FQYHKR
Trigger: TCTCTTGTGGTATTGGAACAATAAACCCGTACAACC...TGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACCGGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CAA 90 bp ACCTGTAATCCATCCCAGTGCTTTGTGAAGCTGTGGTGGGAAGATCACTTGAGGCGTGAGCCACTGCGTTaGAATCACCTGGGAAGCTGG +
Preference number: 5 (lower is better)
Translates to: TCNPSQCFVKLWWEDHLRREPLR*NHLGSW
Trigger: CCAGCTTCCCAGGTGATTCAAACGCAGTGGCTCACG...CCTCAAGTGATCTTCCCACCACAGCTTCACAAAGCACTGGGATGGATTACAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649901.1
CDS TCA 90 bp CACGCTGTATACGCACTGATTCTCCTGGGACACACAAGCCACTTTTaGTTTCAGCCTCCTCCTGGCCCACGTTCTGCTGCAATGACTCTT +
Preference number: 5 (lower is better)
Translates to: HAVYALILLGHTSHF*FQPPPGPRSAAMTL
Trigger: AAGAGTCATTGCAGCAGAACGTGGGCCAGGAGGAGGCTGAAATCAAAAGTGGCTTGTGTGTCCCAGGAGAATCAGTGCGTATACAGCGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000553345.5
ENST00000613218.4
ENST00000620121.4
ENST00000644168.1
ENST00000646985.1
ENST00000647223.1
ENST00000651418.1
CDS TCA 90 bp AATTTCCAGAAGGGCAAGTCCATGACAAAGGGCATCCCTTCCAAGTaGCCCACCAGTTCCAGGGGACTATGCCCAGTAGCTTTCCTGTTC +
Preference number: 5 (lower is better)
Translates to: NFQKGKSMTKGIPSK*PTSSRGLCPVAFLF
Trigger: GAACAGGAAAGCTACTGGGCATAGTCCCCTGGAACTGGTGGGTCACTTGGAAGGGATGCCCTTTGTCATGGACTTGCCCTTCTGGAAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
ENST00000647223.1
CDS CCA 90 bp GATTCTCCTGGGACACACAAGCCACTTTTGATTTCAGCCTCCTCCTaGCCCACGTTCTGCTGCAATGACTCTTCTTTGGTCAAACCCAGC +
Preference number: 5 (lower is better)
Translates to: DSPGTHKPLLISASS*PTFCCNDSSLVKPS
Trigger: GCTGGGTTTGACCAAAGAAGAGTCATTGCAGCAGAACGTGGGCCAGGAGGAGGCTGAAATCAAAAGTGGCTTGTGTGTCCCAGGAGAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000553345.5
ENST00000613218.4
ENST00000620121.4
ENST00000644168.1
ENST00000646985.1
ENST00000647223.1
ENST00000651418.1
CDS CCA 90 bp AGCATCACAACCATGAGTTTACACATACCTGATGCAGATTCCACGTaGGCCCCGTTTACCTTCAGAGGAGTCAGGACAACTCGAGGCAGC +
Preference number: 5 (lower is better)
Translates to: SITTMSLHIPDADST*APFTFRGVRTTRGS
Trigger: GCTGCCTCGAGTTGTCCTGACTCCTCTGAAGGTAAACGGGGCCCACGTGGAATCTGCATCAGGTATGTGTAAACTCATGGTTGTGATGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000470145.3
ENST00000644615.1
ENST00000647223.1
CDS CCA 90 bp TCCTACCCGGATGGGCGGGACTTTGGGCTCCTCTTTAGTGGGCTGTaGCTTTTCGGTGTGAACACTTTCAATTGTGTTACGAAAGGACTG +
Preference number: 5 (lower is better)
Translates to: SYPDGRDFGLLFSGL*LFGVNTFNCVTKGL
Trigger: CAGTCCTTTCGTAACACAATTGAAAGTGTTCACACCGAAAAGCCACAGCCCACTAAAGAGGAGCCCAAAGTCCCGCCCATCCGGGTAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647223.1
CDS-3UTR CAA 90 bp GGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGTCTGTTTTGGTGTCATaGGAGCATCCGAGTAGTTTT +
Preference number: 5 (lower is better)
Translates to: GSPMGYTQETPPARPEGSSVLVS*EHPSSF
Trigger: AAAACTACTCGGATGCTCCAATGACACCAAAACAGA...CGACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CAA 90 bp GTCAAAAGTACGTCAAAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGGTCCTGCAGAATCTGTTTaGGTGTCATTGGAGCATCCG +
Preference number: 5 (lower is better)
Translates to: VKSTSKGASQSQESMVPGPAESV*VSLEHP
Trigger: CGGATGCTCCAATGACACCAAAACAGATTCTGCAGG...ACCTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTTTGACGTACTTTTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CAA 90 bp CAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACAGCACCTGCAGAATCTGTTTaGGTGTCATTGGAGCATCCG +
Preference number: 5 (lower is better)
Translates to: QPGRSQVNHFTLTSSSTAPAESV*VSLEHP
Trigger: CGGATGCTCCAATGACACCAAAACAGATTCTGCAGG...TGCTGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CAA 90 bp TCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGTCTCCTCCTCTTGAATaGGAATGTAGCATAGCATTG +
Preference number: 5 (lower is better)
Translates to: SAGAPAPWWAMPGVTLTLSPPLE*ECSIAL
Trigger: CAATGCTATGCTACATTCCAATTCAAGAGGAGGAGA...CAGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CAA 90 bp AGGTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCGTCTTTTTCTTTTGTTaGTTCGCCTGTGAGGAAGCT +
Preference number: 5 (lower is better)
Translates to: RSAGAPAPWWAMPGVTLTVFFFC*FACEEA
Trigger: AGCTTCCTCACAGGCGAACAAACAAAAGAAAAAGAC...GGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CAA 90 bp CAAGGCAAGGGAAAACACACACAGGGGCATCTACTTGCTGGAAACATGTTGGGAGCACGGAGGTTGGTGTaGACAAGAATGGACCCAGGT +
Preference number: 5 (lower is better)
Translates to: QGKGKHTQGHLLAGNMLGARRLV*TRMDPG
Trigger: ACCTGGGTCCATTCTTGTCAACACCAACCTCCGTGC...TCCCAACATGTTTCCAGCAAGTAGATGCCCCTGTGTGTGTTTTCCCTTGCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CAA 90 bp AACAAGGCAAGGGAAAACACACACAGGGGCATCTACTTGCTGGAAACATGTTGGTGGAAGGTCCGAGAGTaGATCAGGGCACGGAGGTTG +
Preference number: 5 (lower is better)
Translates to: NKARENTHRGIYLLETCWWKVRE*IRARRL
Trigger: CAACCTCCGTGCCCTGATCAACTCTCGGACCTTCCA...CCAACATGTTTCCAGCAAGTAGATGCCCCTGTGTGTGTTTTCCCTTGCCTTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CAA 90 bp GGGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCTCTGACTCCTGTTTTTaGTACAGATTCCTTCTGGCT +
Preference number: 5 (lower is better)
Translates to: GQPNGLYPGNPSSKTRRVSDSCF*YRFLLA
Trigger: AGCCAGAAGGAATCTGTACAAAAAACAGGAGTCAGA...GACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CAA 90 bp AGGTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCTCTGACTCCTGTTTTTaGTACAGATTCCTTCTGGCT +
Preference number: 5 (lower is better)
Translates to: RSAGAPAPWWAMPGVTLTSDSCF*YRFLLA
Trigger: AGCCAGAAGGAATCTGTACAAAAAACAGGAGTCAGA...GGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CAA 90 bp AGTGGAAGACTGGCATTTCTACTTAGTTCAGGTAGGTTAACTCCCTTGGTGGAGGAGGCACGTGCCAAGTaGTCTGGCTCAGCCTGGATC +
Preference number: 5 (lower is better)
Translates to: SGRLAFLLSSGRLTPLVEEARAK*SGSAWI
Trigger: GATCCAGGCTGAGCCAGACAACTTGGCACGTGCCTC...CTCCACCAAGGGAGTTAACCTACCTGAACTAAGTAGAAATGCCAGTCTTCCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CAA 90 bp GAGAATGCAACCTTCTTGCTTCAGTTTCAAGTCCCTCTGGGAGTCAGGCAGTCCAGGAACGGTGGGTCCTaGCTCCTCATCATCACTTTC +
Preference number: 5 (lower is better)
Translates to: ENATFLLQFQVPLGVRQSRNGGS*LLIITF
Trigger: GAAAGTGATGATGAGGAGCAAGGACCCACCGTTCCT...GGACTGCCTGACTCCCAGAGGGACTTGAAACTGAAGCAAGAAGGTTGCATTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CAA 90 bp GCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCCAATTCAATGTCCACCTGTaGACAGTAACTGCCATTGCT +
Preference number: 5 (lower is better)
Translates to: AQWVIPRKPLQQDQKGRQFNVHL*TVTAIA
Trigger: AGCAATGGCAGTTACTGTCAACAGGTGGACATTGAA...TTGGCGACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CAA 90 bp GGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACAGCAGATTGGTTCCAATaGGGTTTCTCATCCTTGTCC +
Preference number: 5 (lower is better)
Translates to: GQPGRSQVNHFTLTSSSTADWFQ*GFSSLS
Trigger: GGACAAGGATGAGAAACCCAATTGGAACCAATCTGC...TGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CAA 90 bp GGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACGCAGATTGGTTCCAATaGGGTTTCTCATCCTTGTCC +
Preference number: 5 (lower is better)
Translates to: GDPTGHRATWQVTSQSFHADWFQ*GFSSLS
Trigger: GGACAAGGATGAGAAACCCAATTGGAACCAATCTGC...GTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CAA 90 bp GAGAATGCAACCTTCTTGCTTCAGTTTCAAGTCCCTCTGGGAGTCAGGCAGTCCGGACAGTGGGGCAGATaGGTTCCAATTGGGTTTCTC +
Preference number: 5 (lower is better)
Translates to: ENATFLLQFQVPLGVRQSGQWGR*VPIGFL
Trigger: GAGAAACCCAATTGGAACCAATCTGCCCCACTGTCC...GGACTGCCTGACTCCCAGAGGGACTTGAAACTGAAGCAAGAAGGTTGCATTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CAA 90 bp CAAGGCAAGGGAAAACACACACAGGGGCATCTACTTGCTGGAAACATGTTGGGATGCCTTGCAATTCTTTaGGGGTGCTCCAGGAGCCTG +
Preference number: 5 (lower is better)
Translates to: QGKGKHTQGHLLAGNMLGCLAIL*GCSRSL
Trigger: CAGGCTCCTGGAGCACCCCAAAAGAATTGCAAGGCA...TCCCAACATGTTTCCAGCAAGTAGATGCCCCTGTGTGTGTTTTCCCTTGCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CAA 90 bp AGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCCAAGTGACAGAGGGCTTTAGCCAAAGGAGATCACATTaGGAGATGAGAAACGAGGTG +
Preference number: 5 (lower is better)
Translates to: RKPLQQDQKGRQVTEGFSQRRSH*EMRNEV
Trigger: CACCTCGTTTCTCATCTCCAAATGTGATCTCCTTTG...GCTAAAGCCCTCTGTCACTTGGCGACCCTTCTGGTCTTGCTGGAGGGGTTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CAA 90 bp TGTAGGAGGAGAGATGTGAAAAGCAAGATGCGTTTGCTCGGTGGCATGTGGGCAACATGGAGTTTGTGCTaGGTCCCAACTTCCCACTGG +
Preference number: 5 (lower is better)
Translates to: CRRRDVKSKMRLLGGMWATWSLC*VPTSHW
Trigger: CCAGTGGGAAGTTGGGACCAAGCACAAACTCCATGT...TGCCCACATGCCACCGAGCAAACGCATCTTGCTTTTCACATCTCTCCTCCTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CAA 90 bp CCGGTCTTTGGTAAACAGACGCTTAAGTTGACAACTTGGACTTGGCCAATACTGGAGCCCAGTCTTCCCTaGGAGTCTGTACCCCACCAG +
Preference number: 5 (lower is better)
Translates to: PVFGKQTLKLTTWTWPILEPSLP*ESVPHQ
Trigger: CTGGTGGGGTACAGACTCCAAGGGAAGACTGGGCTC...CAGTATTGGCCAAGTCCAAGTTGTCAACTTAAGCGTCTGTTTACCAAAGACCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CAA 90 bp CAAGGCAAGGGAAAACACACACAGGGGCATCTACTTGCTGGAAACATGTTGGGACAAAGGCATGTGGCTTaGGAGCCCAGTCTTCCCTTG +
Preference number: 5 (lower is better)
Translates to: QGKGKHTQGHLLAGNMLGQRHVA*EPSLPL
Trigger: CAAGGGAAGACTGGGCTCCAAAGCCACATGCCTTTG...TCCCAACATGTTTCCAGCAAGTAGATGCCCCTGTGTGTGTTTTCCCTTGCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CAA 90 bp GCCTTGGGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAAAAGTCTTCTCATTCTaGACGCTGCCAACAAAGGCA +
Preference number: 5 (lower is better)
Translates to: ALGSPMGYTQETPPARPEKVFSF*TLPTKA
Trigger: TGCCTTTGTTGGCAGCGTCAAGAATGAGAAGACTTT...TTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCCCAAGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CAA 90 bp GTCAAAAGTACGTCAAAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGGTGCTGGTGGAACTCAGTaGGAGTTTAGAAAGCTTCCC +
Preference number: 5 (lower is better)
Translates to: VKSTSKGASQSQESMVPGAGGTQ*EFRKLP
Trigger: GGGAAGCTTTCTAAACTCCAACTGAGTTCCACCAGC...ACCTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTTTGACGTACTTTTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CAA 90 bp GAGAGGCAGGAGCAGGCATGGCTTTGTTTCTTCCCAAACCTGCCTGATGTCAAAGCACCAAAGTTTGCTTaGTGGCTCAGCTGCACCACA +
Preference number: 5 (lower is better)
Translates to: ERQEQAWLCFFPNLPDVKAPKFA*WLSCTT
Trigger: TGTGGTGCAGCTGAGCCACAAAGCAAACTTTGGTGC...TTTGACATCAGGCAGGTTTGGGAAGAAACAAAGCCATGCCTGCTCCTGCCTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CAA 90 bp CTGGCATTTCTACTTAGTTCAGGTAGGTTAACTCCCTTGGTGGAGAATGCAACCTCAGGCTGGCTGGCCTaGGGCAGCCCAATGGGTTAT +
Preference number: 5 (lower is better)
Translates to: LAFLLSSGRLTPLVENATSGWLA*GSPMGY
Trigger: ATAACCCATTGGGCTGCCCAAGGCCAGCCAGCCTGA...GGTTGCATTCTCCACCAAGGGAGTTAACCTACCTGAACTAAGTAGAAATGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CAA 90 bp GCCGGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTGAGAATGCAACCTTCTaGCTTCAGTTTCAAGTCCCT +
Preference number: 5 (lower is better)
Translates to: AGDPTGHRATWQVTSQSFENATF*LQFQVP
Trigger: AGGGACTTGAAACTGAAGCAAGAAGGTTGCATTCTC...AAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACCGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CAA 90 bp GAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTAAAGGTAGGTTAACTCCCTaGGTGGAGAATGCAACCTTC +
Preference number: 5 (lower is better)
Translates to: EGRRGLDMFGPLFPVFGKGRLTP*VENATF
Trigger: GAAGGTTGCATTCTCCACCAAGGGAGTTAACCTACC...TTTACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CAA 90 bp GGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACAGAACCAAGGTCAAACTaGCTCCGTCAACTGGCAAAT +
Preference number: 5 (lower is better)
Translates to: GQPGRSQVNHFTLTSSSTEPRSN*LRQLAN
Trigger: ATTTGCCAGTTGACGGAGCAAGTTTGACCTTGGTTC...TGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CAA 90 bp GAGATGCCCACTCCCATAGGGTCCAAAGTGACAGGGAGGATGTCAAGCAGAGGATATTCCCCAACCCCATaGTCCAAGCAGAGCTATTCA +
Preference number: 5 (lower is better)
Translates to: EMPTPIGSKVTGRMSSRGYSPTP*SKQSYS
Trigger: TGAATAGCTCTGCTTGGACAATGGGGTTGGGGAATA...TCCTCTGCTTGACATCCTCCCTGTCACTTTGGACCCTATGGGAGTGGGCATCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CAA 90 bp GGCTGCCCAGGGAACTCACCCATGAATCCAGAAGCACTTAACACTGGTGGTGGTTATTCCCCAACCCCATaGTCCAAGCAGAGCTATTCA +
Preference number: 5 (lower is better)
Translates to: GCPGNSPMNPEALNTGGGYSPTP*SKQSYS
Trigger: TGAATAGCTCTGCTTGGACAATGGGGTTGGGGAATA...ACCACCACCAGTGTTAAGTGCTTCTGGATTCATGGGTGAGTTCCCTGGGCAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CAA 90 bp CAAGGCAAGGGAAAACACACACAGGGGCATCTACTTGCTGGAAACATGTTGGGAGGAGCAGGCATGGCTTaGTTTCTTCCCAAACCTGCC +
Preference number: 5 (lower is better)
Translates to: QGKGKHTQGHLLAGNMLGGAGMA*FLPKPA
Trigger: GGCAGGTTTGGGAAGAAACAAAGCCATGCCTGCTCC...TCCCAACATGTTTCCAGCAAGTAGATGCCCCTGTGTGTGTTTTCCCTTGCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CAA 90 bp TGTAATCCATCCCAGTGCTTTGTGAAGCTGTGGTGGGAAGATCACTTGAGGCCACACAACCCCCATCGGTaGAACGAGACGGCTTCAAAC +
Preference number: 5 (lower is better)
Translates to: CNPSQCFVKLWWEDHLRPHNPHR*NETASN
Trigger: GTTTGAAGCCGTCTCGTTCAACCGATGGGGGTTGTG...TGGCCTCAAGTGATCTTCCCACCACAGCTTCACAAAGCACTGGGATGGATTACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649901.1
CDS TCA 90 bp GAAGTGGTGCCAGACTCACATTCAGTTCTAACATCCGGATGCAACTaGGGCTGCTCCACTAATCTCTCAGCTACTGAGGTTTGGGAGGAC +
Preference number: 5 (lower is better)
Translates to: EVVPDSHSVLTSGCN*GCSTNLSATEVWED
Trigger: GTCCTCCCAAACCTCAGTAGCTGAGAGATTAGTGGAGCAGCCTCAGTTGCATCCGGATGTTAGAACTGAATGTGAGTCTGGCACCACTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
ENST00000647223.1
CDS GCA 90 bp CACTGGAGCGAGATGCTTTCCACCGTGCTGCTGTCAGTGAACATTTaGAAGGAAAGTGATGCACTGTGGCTCGCACCAAAGTTTGCTTTG +
Preference number: 5 (lower is better)
Translates to: HWSEMLSTVLLSVNI*KESDALWLAPKFAL
Trigger: CAAAGCAAACTTTGGTGCGAGCCACAGTGCATCACTTTCCTTGCAAATGTTCACTGACAGCAGCACGGTGGAAAGCATCTCGCTCCAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
ENST00000647223.1
CDS GCA 90 bp AAGTTAGAGAACCGCTGCTCAGGGTTCAAGCTGGGAGTAAGCACTTaGTTCCCTCCACGCACCTGGTTTAGATTGGGAAAGCTCAACATG +
Preference number: 5 (lower is better)
Translates to: KLENRCSGFKLGVST*FPPRTWFRLGKLNM
Trigger: CATGTTGAGCTTTCCCAATCTAAACCAGGTGCGTGGAGGGAAGCAAGTGCTTACTCCCAGCTTGAACCCTGAGCAGCGGTTCTCTAACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643168.1
ENST00000649901.1
CDS GCA 90 bp GTTCGCCTGCGTTCCAAGAGAGAACAAAAGAGAGCCCAAGTCAACTaGAGAGCCACAAAAGCATTCCCTGGCGACACTATCTCTACTCAC +
Preference number: 5 (lower is better)
Translates to: VRLRSKREQKRAQVN*RATKAFPGDTISTH
Trigger: GTGAGTAGAGATAGTGTCGCCAGGGAATGCTTTTGTGGCTCTGCAGTTGACTTGGGCTCTCTTTTGTTCTCTCTTGGAACGCAGGCGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647223.1
CDS CCA 90 bp GGCCAGTTCCTTTCTCTAATGTATCATCTCCCACTAGAGACGGAATaGGACCATTGTCTGCAGGAACGGTGGGTCCTTGCTCCTCATCAT +
Preference number: 5 (lower is better)
Translates to: GQFLSLMYHLPLETE*DHCLQERWVLAPHH
Trigger: ATGATGAGGAGCAAGGACCCACCGTTCCTGCAGACAATGGTCCCATTCCGTCTCTAGTGGGAGATGATACATTAGAGAAAGGAACTGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
ENST00000647223.1
CDS CCA 90 bp CCCACTCCTCTCCAACCTGGGGCTCAACAGATGGTATGTGTTCTCTaGATTCTGGTTTGGGCTGTTTCACTACCTCATCATTCGATGGGA +
Preference number: 5 (lower is better)
Translates to: PTPLQPGAQQMVCVL*ILVWAVSLPHHSMG
Trigger: TCCCATCGAATGATGAGGTAGTGAAACAGCCCAAACCAGAATCCAGAGAACACATACCATCTGTTGAGCCCCAGGTTGGAGAGGAGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
ENST00000647223.1
CDS CCA 90 bp GCATGTCACCATTCACCTTGGACAGTGGGGCAGATTGGTTCCAATTaGGTTTCTCATCCTTGTCCACCGAAGATCCCTTTGTCACTGCAG +
Preference number: 5 (lower is better)
Translates to: ACHHSPWTVGQIGSN*VSHPCPPKIPLSLQ
Trigger: CTGCAGTGACAAAGGGATCTTCGGTGGACAAGGATGAGAAACCCAATTGGAACCAATCTGCCCCACTGTCCAAGGTGAATGGTGACATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
ENST00000647223.1
CDS CCA 90 bp AAAAGTCTTCTCATTCTTGACGCTGCCAACAAAGGCATGTGGCTTTaGAGCCCAGTCTTCCCTTGGAGTCTGTACCCCACCAGACATGGA +
Preference number: 5 (lower is better)
Translates to: KSLLILDAANKGMWL*SPVFPWSLYPTRHG
Trigger: TCCATGTCTGGTGGGGTACAGACTCCAAGGGAAGACTGGGCTCCAAAGCCACATGCCTTTGTTGGCAGCGTCAAGAATGAGAAGACTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
ENST00000647223.1
CDS CCA 90 bp ACCGTGCTGCTGTCAGTGAACATTTGCAAGGAAAGTGATGCACTGTaGCTCGCACCAAAGTTTGCTTTGTGGCTCAGCTGCACCACACTT +
Preference number: 5 (lower is better)
Translates to: TVLLSVNICKESDAL*LAPKFALWLSCTTL
Trigger: AAGTGTGGTGCAGCTGAGCCACAAAGCAAACTTTGGTGCGAGCCACAGTGCATCACTTTCCTTGCAAATGTTCACTGACAGCAGCACGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
ENST00000647223.1
CDS-3UTR CAA 90 bp TCAATCATTTCACCCTCACGTCGAGCAGCACAGCACTCAGTGGCTCTGACAACACCTGCAGAATCTGTTTaGGTGTCATTGGAGCATCCG +
Preference number: 5 (lower is better)
Translates to: SIISPSRRAAQHSVALTTPAESV*VSLEHP
Trigger: CGGATGCTCCAATGACACCAAAACAGATTCTGCAGG...TGTTGTCAGAGCCACTGAGTGCTGTGCTGCTCGACGTGAGGGTGAAATGATTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CAA 90 bp GTGACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCTGCGAATGTAGCATAGCATaGAGGCATGCGAGAGGGGAA +
Preference number: 5 (lower is better)
Translates to: VTEGFSSVNFGGRQECSCECSIA*RHARGE
Trigger: TTCCCCTCTCGCATGCCTCAATGCTATGCTACATTC...GCAGGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CAA 90 bp TGTAGGAGGAGAGATGTGAAAAGCAAGATGCGTTTGCTCGGTGGCATGTGGGCAGAATGTAGCATAGCATaGAGGCATGCGAGAGGGGAA +
Preference number: 5 (lower is better)
Translates to: CRRRDVKSKMRLLGGMWAECSIA*RHARGE
Trigger: TTCCCCTCTCGCATGCCTCAATGCTATGCTACATTC...TGCCCACATGCCACCGAGCAAACGCATCTTGCTTTTCACATCTCTCCTCCTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CAA 90 bp TGTAGGAGGAGAGATGTGAAAAGCAAGATGCGTTTGCTCGGTGGCATGTGGGCATGCAGGGCATCCTTCTaGAGCGTGAAAAGGCTGATT +
Preference number: 5 (lower is better)
Translates to: CRRRDVKSKMRLLGGMWACRASF*SVKRLI
Trigger: AATCAGCCTTTTCACGCTCAAGAAGGATGCCCTGCA...TGCCCACATGCCACCGAGCAAACGCATCTTGCTTTTCACATCTCTCCTCCTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CAA 90 bp GAGAATGCAACCTTCTTGCTTCAGTTTCAAGTCCCTCTGGGAGTCAGGCAGTCCTGCAGGGCATCCTTCTaGAGCGTGAAAAGGCTGATT +
Preference number: 5 (lower is better)
Translates to: ENATFLLQFQVPLGVRQSCRASF*SVKRLI
Trigger: AATCAGCCTTTTCACGCTCAAGAAGGATGCCCTGCA...GGACTGCCTGACTCCCAGAGGGACTTGAAACTGAAGCAAGAAGGTTGCATTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CAA 90 bp GAGAATGCAACCTTCTTGCTTCAGTTTCAAGTCCCTCTGGGAGTCAGGCAGTCCACACACAAGCCACTTTaGATTTCAGCCTCCTCCTGG +
Preference number: 5 (lower is better)
Translates to: ENATFLLQFQVPLGVRQSTHKPL*ISASSW
Trigger: CCAGGAGGAGGCTGAAATCAAAAGTGGCTTGTGTGT...GGACTGCCTGACTCCCAGAGGGACTTGAAACTGAAGCAAGAAGGTTGCATTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CAA 90 bp GCCGGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTTCTGACTCCTGTTTTTaGTACAGATTCCTTCTGGCT +
Preference number: 5 (lower is better)
Translates to: AGDPTGHRATWQVTSQSFSDSCF*YRFLLA
Trigger: AGCCAGAAGGAATCTGTACAAAAAACAGGAGTCAGA...AAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACCGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CAA 90 bp GCCTTGGGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAATCTGACTCCTGTTTTTaGTACAGATTCCTTCTGGCT +
Preference number: 5 (lower is better)
Translates to: ALGSPMGYTQETPPARPESDSCF*YRFLLA
Trigger: AGCCAGAAGGAATCTGTACAAAAAACAGGAGTCAGA...TTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCCCAAGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CAA 90 bp AGGTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCTGTGAACACTTTCAATaGTGTTACGAAAGGACTGAC +
Preference number: 5 (lower is better)
Translates to: RSAGAPAPWWAMPGVTLTCEHFQ*CYERTD
Trigger: GTCAGTCCTTTCGTAACACAATTGAAAGTGTTCACA...GGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CAA 90 bp AAAAGTACGTCAAAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGGTATTAGGAACGGTGGGTCCTaGCTCCTCATCATCACTTTC +
Preference number: 5 (lower is better)
Translates to: KSTSKGASQSQESMVPGIRNGGS*LLIITF
Trigger: GAAAGTGATGATGAGGAGCAAGGACCCACCGTTCCT...AATACCTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTTTGACGTACTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CAA 90 bp CAAGTGACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCAGGAACGGTGGGTCCTaGCTCCTCATCATCACTTTC +
Preference number: 5 (lower is better)
Translates to: QVTEGFSSVNFGGRQECSRNGGS*LLIITF
Trigger: GAAAGTGATGATGAGGAGCAAGGACCCACCGTTCCT...GGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGTCACTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CAA 90 bp AGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTAAACTCTCTGGATTCTGGTTaGGGCTGTTTCACTACCTCA +
Preference number: 5 (lower is better)
Translates to: REEEDWTCLGPCSRSLVNSLDSG*GCFTTS
Trigger: TGAGGTAGTGAAACAGCCCAAACCAGAATCCAGAGA...GTTTACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CAA 90 bp GAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTAAAGCAGATTGGTTCCAATaGGGTTTCTCATCCTTGTCC +
Preference number: 5 (lower is better)
Translates to: EGRRGLDMFGPLFPVFGKADWFQ*GFSSLS
Trigger: GGACAAGGATGAGAAACCCAATTGGAACCAATCTGC...TTTACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CAA 90 bp CAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACAGCAGCAGATTGGTTCCAATaGGGTTTCTCATCCTTGTCC +
Preference number: 5 (lower is better)
Translates to: QPGRSQVNHFTLTSSSTAADWFQ*GFSSLS
Trigger: GGACAAGGATGAGAAACCCAATTGGAACCAATCTGC...TGCTGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CAA 90 bp CAAGGCAAGGGAAAACACACACAGGGGCATCTACTTGCTGGAAACATGTTGGGAGGACAGTGGGGCAGATaGGTTCCAATTGGGTTTCTC +
Preference number: 5 (lower is better)
Translates to: QGKGKHTQGHLLAGNMLGGQWGR*VPIGFL
Trigger: GAGAAACCCAATTGGAACCAATCTGCCCCACTGTCC...TCCCAACATGTTTCCAGCAAGTAGATGCCCCTGTGTGTGTTTTCCCTTGCCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CAA 90 bp GGGGGTAGTGGAAGACTGGCATTTCTACTTAGTTCAGGTAGGTTAACTCCCTTGGGAATCTGGGATCTTTaGGCGGACCGCACATACTCG +
Preference number: 5 (lower is better)
Translates to: GGSGRLAFLLSSGRLTPLGIWDL*ADRTYS
Trigger: CGAGTATGTGCGGTCCGCCAAAAGATCCCAGATTCC...CAAGGGAGTTAACCTACCTGAACTAAGTAGAAATGCCAGTCTTCCACTACCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CAA 90 bp AACAAGGCAAGGGAAAACACACACAGGGGCATCTACTTGCTGGAAACATGTTGGTGCCTTGCAATTCTTTaGGGGTGCTCCAGGAGCCTG +
Preference number: 5 (lower is better)
Translates to: NKARENTHRGIYLLETCWCLAIL*GCSRSL
Trigger: CAGGCTCCTGGAGCACCCCAAAAGAATTGCAAGGCA...CCAACATGTTTCCAGCAAGTAGATGCCCCTGTGTGTGTTTTCCCTTGCCTTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CAA 90 bp GACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTAAAAAGCTTCTTCCCTaGGCCTGTAACATTGCTCTG +
Preference number: 5 (lower is better)
Translates to: DPTGHRATWQVTSQSFHPKKLLP*ACNIAL
Trigger: CAGAGCAATGTTACAGGCCAAGGGAAGAAGCTTTTT...AGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CAA 90 bp ACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCTGCCTAACATGGAGTTTGTGCTaGGTCCCAACTTCCCACTGG +
Preference number: 5 (lower is better)
Translates to: TEGFSSVNFGGRQECSCLTWSLC*VPTSHW
Trigger: CCAGTGGGAAGTTGGGACCAAGCACAAACTCCATGT...TAGGCAGGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CAA 90 bp GGGGGTAGTGGAAGACTGGCATTTCTACTTAGTTCAGGTAGGTTAACTCCCTTGCAAAGGCATGTGGCTTaGGAGCCCAGTCTTCCCTTG +
Preference number: 5 (lower is better)
Translates to: GGSGRLAFLLSSGRLTPLQRHVA*EPSLPL
Trigger: CAAGGGAAGACTGGGCTCCAAAGCCACATGCCTTTG...CAAGGGAGTTAACCTACCTGAACTAAGTAGAAATGCCAGTCTTCCACTACCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CAA 90 bp CAAGGCAAGGGAAAACACACACAGGGGCATCTACTTGCTGGAAACATGTTGGGAGCACCAAAGTTTGCTTaGTGGCTCAGCTGCACCACA +
Preference number: 5 (lower is better)
Translates to: QGKGKHTQGHLLAGNMLGAPKFA*WLSCTT
Trigger: TGTGGTGCAGCTGAGCCACAAAGCAAACTTTGGTGC...TCCCAACATGTTTCCAGCAAGTAGATGCCCCTGTGTGTGTTTTCCCTTGCCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CAA 90 bp CAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGACAATACACAGAGCTTaGAGGGTCCAATACAGTCAT +
Preference number: 5 (lower is better)
Translates to: QGIGQPGRSQVNHFTLTSTIHRA*RVQYSH
Trigger: ATGACTGTATTGGACCCTCAAAGCTCTGTGTATTGT...CGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CAA 90 bp GCCGGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTACAATACACAGAGCTTaGAGGGTCCAATACAGTCAT +
Preference number: 5 (lower is better)
Translates to: AGDPTGHRATWQVTSQSFTIHRA*RVQYSH
Trigger: ATGACTGTATTGGACCCTCAAAGCTCTGTGTATTGT...AAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACCGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CAA 90 bp GCCTTGGGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAACAATACACAGAGCTTaGAGGGTCCAATACAGTCAT +
Preference number: 5 (lower is better)
Translates to: ALGSPMGYTQETPPARPETIHRA*RVQYSH
Trigger: ATGACTGTATTGGACCCTCAAAGCTCTGTGTATTGT...TTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCCCAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CAA 90 bp GAGATGCCCACTCCCATAGGGTCCAAAGTGACAGGGAGGATGTCAAGCAGAGGAGAGAATGCAACCTTCTaGCTTCAGTTTCAAGTCCCT +
Preference number: 5 (lower is better)
Translates to: EMPTPIGSKVTGRMSSRGENATF*LQFQVP
Trigger: AGGGACTTGAAACTGAAGCAAGAAGGTTGCATTCTC...TCCTCTGCTTGACATCCTCCCTGTCACTTTGGACCCTATGGGAGTGGGCATCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CAA 90 bp GGCTGCCCAGGGAACTCACCCATGAATCCAGAAGCACTTAACACTGGTGGTGGTGAGAATGCAACCTTCTaGCTTCAGTTTCAAGTCCCT +
Preference number: 5 (lower is better)
Translates to: GCPGNSPMNPEALNTGGGENATF*LQFQVP
Trigger: AGGGACTTGAAACTGAAGCAAGAAGGTTGCATTCTC...ACCACCACCAGTGTTAAGTGCTTCTGGATTCATGGGTGAGTTCCCTGGGCAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CAA 90 bp CAAGGCAAGGGAAAACACACACAGGGGCATCTACTTGCTGGAAACATGTTGGGAAAAAGCAAGATGCGTTaGCTCGGTGGCATGTGGGCA +
Preference number: 5 (lower is better)
Translates to: QGKGKHTQGHLLAGNMLGKSKMR*LGGMWA
Trigger: TGCCCACATGCCACCGAGCAAACGCATCTTGCTTTT...TCCCAACATGTTTCCAGCAAGTAGATGCCCCTGTGTGTGTTTTCCCTTGCCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CAA 90 bp AAAAGTACGTCAAAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGGTATTCACAGGGGCATCTACTaGCTGGAAACATGTTGGGAG +
Preference number: 5 (lower is better)
Translates to: KSTSKGASQSQESMVPGIHRGIY*LETCWE
Trigger: CTCCCAACATGTTTCCAGCAAGTAGATGCCCCTGTG...AATACCTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTTTGACGTACTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CAA 90 bp CAAGGCAAGGGAAAACACACACAGGGGCATCTACTTGCTGGAAACATGTTGGGACACAGGGGCATCTACTaGCTGGAAACATGTTGGGAG +
Preference number: 5 (lower is better)
Translates to: QGKGKHTQGHLLAGNMLGHRGIY*LETCWE
Trigger: CTCCCAACATGTTTCCAGCAAGTAGATGCCCCTGTG...TCCCAACATGTTTCCAGCAAGTAGATGCCCCTGTGTGTGTTTTCCCTTGCCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CAA 90 bp CATGGCTTTGTTTCTTCCCAAACCTGCCTGATGTCAAAAGTACGTCAAAAGGAGGAGGACTGGACATGTTaGGGCCCCTGTTCCCGGTCT +
Preference number: 5 (lower is better)
Translates to: HGFVSSQTCLMSKVRQKEEDWTC*GPCSRS
Trigger: AGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTC...CTCCTTTTGACGTACTTTTGACATCAGGCAGGTTTGGGAAGAAACAAAGCCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CAA 90 bp AGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCCAAGTGACAGAGGGCTTTAGCGGTTGTACGGGTTTATaGTTCCAATACCACAAGAGA +
Preference number: 5 (lower is better)
Translates to: RKPLQQDQKGRQVTEGFSGCTGL*FQYHKR
Trigger: TCTCTTGTGGTATTGGAACAATAAACCCGTACAACC...GCTAAAGCCCTCTGTCACTTGGCGACCCTTCTGGTCTTGCTGGAGGGGTTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CAA 90 bp ACCTGTAATCCATCCCAGTGCTTTGTGAAGCTGTGGTGGGAAGATCACTTGAGGATGCCATTGGCGTCCTaGAATGTGGGGTCGCTTTTC +
Preference number: 5 (lower is better)
Translates to: TCNPSQCFVKLWWEDHLRMPLAS*NVGSLF
Trigger: GAAAAGCGACCCCACATTCAAGGACGCCAATGGCAT...CCTCAAGTGATCTTCCCACCACAGCTTCACAAAGCACTGGGATGGATTACAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000645035.1
ENST00000649901.1
CDS-3UTR CAA 90 bp ACCTGTAATCCATCCCAGTGCTTTGTGAAGCTGTGGTGGGAAGATCACTTGAGGAAGCTCAACATGCCATaGGCGTCCTTGAATGTGGGG +
Preference number: 5 (lower is better)
Translates to: TCNPSQCFVKLWWEDHLRKLNMP*ASLNVG
Trigger: CCCCACATTCAAGGACGCCAATGGCATGTTGAGCTT...CCTCAAGTGATCTTCCCACCACAGCTTCACAAAGCACTGGGATGGATTACAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000645035.1
ENST00000649901.1
CDS-3UTR CAA 90 bp TGTAATCCATCCCAGTGCTTTGTGAAGCTGTGGTGGGAAGATCACTTGAGGCCAAAGCTCAACATGCCATaGGCGTCCTTGAATGTGGGG +
Preference number: 5 (lower is better)
Translates to: CNPSQCFVKLWWEDHLRPKLNMP*ASLNVG
Trigger: CCCCACATTCAAGGACGCCAATGGCATGTTGAGCTT...TGGCCTCAAGTGATCTTCCCACCACAGCTTCACAAAGCACTGGGATGGATTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000645035.1
ENST00000649901.1
CDS-3UTR CAA 90 bp GATGCAGATTCCACGTGGGCCCCGTTTACCTTCAGAGGAGTCAGGACAACTCGAGCAAGACTTCATCTCTaGAGCGTGAAAAGGCTGATT +
Preference number: 5 (lower is better)
Translates to: DADSTWAPFTFRGVRTTRARLHL*SVKRLI
Trigger: AATCAGCCTTTTCACGCTCAAGAGATGAAGTCTTGC...TCGAGTTGTCCTGACTCCTCTGAAGGTAAACGGGGCCCACGTGGAATCTGCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644587.1
CDS TCA 90 bp CAGGACCTGAGGAAAAAGCATCACAACCATGAGTTTACACATACCTaGTGCAGATTCCACGTGGGCCCCGTTTACCTTCAGAGGAGTCAG +
Preference number: 5 (lower is better)
Translates to: QDLRKKHHNHEFTHT*CRFHVGPVYLQRSQ
Trigger: CTGACTCCTCTGAAGGTAAACGGGGCCCACGTGGAATCTGCATCAGGTATGTGTAAACTCATGGTTGTGATGCTTTTTCCTCAGGTCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000470145.3
ENST00000644615.1
ENST00000647223.1
CDS TCA 90 bp CTCCACTGTAGCTGGATGGCGAGACCACTGCAGGGCATCCTTCTGTaGCAGCAAGGTACAACTCAGGTGAACAAAACCCTACAAATTCTT +
Preference number: 5 (lower is better)
Translates to: LHCSWMARPLQGILL*QQGTTQVNKTLQIL
Trigger: AAGAATTTGTAGGGTTTTGTTCACCTGAGTTGTACCTTGCTGTCACAGAAGGATGCCCTGCAGTGGTCTCGCCATCCAGCTACAGTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644060.1
CDS GCA 90 bp AAATACCAATTTCCAGTCCAGCTTCTGAAGGCAAACAGCCCAGTCTaGGTTTCTCAAAGTGGGGTCCGTGAGCCACTGCGTTTGAATCAC +
Preference number: 5 (lower is better)
Translates to: KYQFPVQLLKANSPV*VSQSGVREPLRLNH
Trigger: GTGATTCAAACGCAGTGGCTCACGGACCCCACTTTGAGAAACGCAGACTGGGCTGTTTGCCTTCAGAAGCTGGACTGGAAATTGGTATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643168.1
ENST00000649901.1
CDS CCA 90 bp TTGAATCCGGATGGGCGGGACTTTGGGCTCCTCTTTAGTGGGCTGTaGCTTTTCGGTGTGAACACTTTCAATTGTGTTACGAAAGGACTG +
Preference number: 5 (lower is better)
Translates to: LNPDGRDFGLLFSGL*LFGVNTFNCVTKGL
Trigger: CAGTCCTTTCGTAACACAATTGAAAGTGTTCACACCGAAAAGCCACAGCCCACTAAAGAGGAGCCCAAAGTCCCGCCCATCCGGATTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000644168.1
ENST00000646985.1
ENST00000651418.1
CDS CCA 90 bp GTAACCAGACGCATGTCACCATTCACCTTGGACAGTGGGGCAGATTaGTTCCAATTGGGTTTCTCATCCTTGTCCACCGAAGATCCCTTT +
Preference number: 5 (lower is better)
Translates to: VTRRMSPFTLDSGAD*FQLGFSSLSTEDPF
Trigger: AAAGGGATCTTCGGTGGACAAGGATGAGAAACCCAATTGGAACCAATCTGCCCCACTGTCCAAGGTGAATGGTGACATGCGTCTGGTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
ENST00000647223.1
CDS CCA 90 bp ATCTGTCCTTGTAACCAGACGCATGTCACCATTCACCTTGGACAGTaGGGCAGATTGGTTCCAATTGGGTTTCTCATCCTTGTCCACCGA +
Preference number: 5 (lower is better)
Translates to: ICPCNQTHVTIHLGQ*GRLVPIGFLILVHR
Trigger: TCGGTGGACAAGGATGAGAAACCCAATTGGAACCAATCTGCCCCACTGTCCAAGGTGAATGGTGACATGCGTCTGGTTACAAGGACAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
ENST00000647223.1
CDS CCA 90 bp AGCACTACACCTTTTACAAAGCACTGGCATAATCAAATCCTCCGTTaGATCCTCACGACTGCCCTGGGAGACAAAGAGGAAGGCACACAG +
Preference number: 5 (lower is better)
Translates to: STTPFTKHWHNQILR*ILTTALGDKEEGTQ
Trigger: CTGTGTGCCTTCCTCTTTGTCTCCCAGGGCAGTCGTGAGGATCCAACGGAGGATTTGATTATGCCAGTGCTTTGTAAAAGGTGTAGTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470145.3
ENST00000647223.1
CDS-3UTR CAA 90 bp ACCTGTAATCCATCCCAGTGCTTTGTGAAGCTGTGGTGGGAAGATCACTTGAGGCCTGCAGAATCTGTTTaGGTGTCATTGGAGCATCCG +
Preference number: 5 (lower is better)
Translates to: TCNPSQCFVKLWWEDHLRPAESV*VSLEHP
Trigger: CGGATGCTCCAATGACACCAAAACAGATTCTGCAGG...CCTCAAGTGATCTTCCCACCACAGCTTCACAAAGCACTGGGATGGATTACAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000555343.2
ENST00000642676.1
ENST00000645035.1
ENST00000645337.1
ENST00000649901.1
CDS-3UTR CAA 90 bp CTTGGTGGAGAATGCAACCTTCTTGCTTCAGTTTCAAGTCCCTCTGGGAGTCAGCCTGCAGAATCTGTTTaGGTGTCATTGGAGCATCCG +
Preference number: 5 (lower is better)
Translates to: LGGECNLLASVSSPSGSQPAESV*VSLEHP
Trigger: CGGATGCTCCAATGACACCAAAACAGATTCTGCAGG...CTGACTCCCAGAGGGACTTGAAACTGAAGCAAGAAGGTTGCATTCTCCACCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CAA 90 bp TGTAATCCATCCCAGTGCTTTGTGAAGCTGTGGTGGGAAGATCACTTGAGGCCACCTGCAGAATCTGTTTaGGTGTCATTGGAGCATCCG +
Preference number: 5 (lower is better)
Translates to: CNPSQCFVKLWWEDHLRPPAESV*VSLEHP
Trigger: CGGATGCTCCAATGACACCAAAACAGATTCTGCAGG...TGGCCTCAAGTGATCTTCCCACCACAGCTTCACAAAGCACTGGGATGGATTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000555343.2
ENST00000642676.1
ENST00000644587.1
ENST00000645035.1
ENST00000645337.1
ENST00000649901.1
CDS-3UTR CAA 90 bp TGTAATCCATCCCAGTGCTTTGTGAAGCTGTGGTGGGAAGATCACTTGAGGCCAGAATGTAGCATAGCATaGAGGCATGCGAGAGGGGAA +
Preference number: 5 (lower is better)
Translates to: CNPSQCFVKLWWEDHLRPECSIA*RHARGE
Trigger: TTCCCCTCTCGCATGCCTCAATGCTATGCTACATTC...TGGCCTCAAGTGATCTTCCCACCACAGCTTCACAAAGCACTGGGATGGATTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000555343.2
ENST00000642676.1
ENST00000644587.1
ENST00000645035.1
ENST00000645337.1
ENST00000649901.1
CDS-3UTR CAA 90 bp ACCTGTAATCCATCCCAGTGCTTTGTGAAGCTGTGGTGGGAAGATCACTTGAGGGAATGTAGCATAGCATaGAGGCATGCGAGAGGGGAA +
Preference number: 5 (lower is better)
Translates to: TCNPSQCFVKLWWEDHLRECSIA*RHARGE
Trigger: TTCCCCTCTCGCATGCCTCAATGCTATGCTACATTC...CCTCAAGTGATCTTCCCACCACAGCTTCACAAAGCACTGGGATGGATTACAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000555343.2
ENST00000642676.1
ENST00000645035.1
ENST00000645337.1
ENST00000649901.1
CDS-3UTR CAA 90 bp CTTCCTGGGGGCTGCCCAGGGAACTCACCCATGAATCCAGAAGCACTTAACACTTCTCCTCCTCTTGAATaGGAATGTAGCATAGCATTG +
Preference number: 5 (lower is better)
Translates to: LPGGCPGNSPMNPEALNTSPPLE*ECSIAL
Trigger: CAATGCTATGCTACATTCCAATTCAAGAGGAGGAGA...AGTGTTAAGTGCTTCTGGATTCATGGGTGAGTTCCCTGGGCAGCCCCCAGGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CAA 90 bp CAAGTGACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCTGCAGGGCATCCTTCTaGAGCGTGAAAAGGCTGATT +
Preference number: 5 (lower is better)
Translates to: QVTEGFSSVNFGGRQECSCRASF*SVKRLI
Trigger: AATCAGCCTTTTCACGCTCAAGAAGGATGCCCTGCA...GGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGTCACTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CAA 90 bp CCTGTGAGGAAGCTCTGTAGCTGTCCCTGGGATTGGAAAGAGGTCGACTCTGAGGTCTTTTTCTTTTGTTaGTTCGCCTGTGAGGAAGCT +
Preference number: 5 (lower is better)
Translates to: PVRKLCSCPWDWKEVDSEVFFFC*FACEEA
Trigger: AGCTTCCTCACAGGCGAACAAACAAAAGAAAAAGAC...CTCAGAGTCGACCTCTTTCCAATCCCAGGGACAGCTACAGAGCTTCCTCACAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644587.1
CDS-3UTR CAA 90 bp AAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGGTATTGCTGTGACAGGTCTGTCGTATCCTGACTaGCATCTCATGAGTAAATTC +
Preference number: 5 (lower is better)
Translates to: KGASQSQESMVPGIAVTGLSYPD*HLMSKF
Trigger: GAATTTACTCATGAGATGCAAGTCAGGATACGACAG...ACCTGTCACAGCAATACCTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CAA 90 bp GGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCTGTCGTATCCTGACTaGCATCTCATGAGTAAATTC +
Preference number: 5 (lower is better)
Translates to: GDPTGHRATWQVTSQSFHLSYPD*HLMSKF
Trigger: GAATTTACTCATGAGATGCAAGTCAGGATACGACAG...GTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CAA 90 bp CTTGGTGGAGAATGCAACCTTCTTGCTTCAGTTTCAAGTCCCTCTGGGAGTCAGACACACAAGCCACTTTaGATTTCAGCCTCCTCCTGG +
Preference number: 5 (lower is better)
Translates to: LGGECNLLASVSSPSGSQTHKPL*ISASSW
Trigger: CCAGGAGGAGGCTGAAATCAAAAGTGGCTTGTGTGT...CTGACTCCCAGAGGGACTTGAAACTGAAGCAAGAAGGTTGCATTCTCCACCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CAA 90 bp GGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACTCTGACTCCTGTTTTTaGTACAGATTCCTTCTGGCT +
Preference number: 5 (lower is better)
Translates to: GDPTGHRATWQVTSQSFHSDSCF*YRFLLA
Trigger: AGCCAGAAGGAATCTGTACAAAAAACAGGAGTCAGA...GTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CAA 90 bp AATCACCACATCATTCCCAACTTGTCACTCATGCTTCAGATGACGAAAATGCCAGAGGCACGTGCCAAGTaGTCTGGCTCAGCCTGGATC +
Preference number: 5 (lower is better)
Translates to: NHHIIPNLSLMLQMTKMPEARAK*SGSAWI
Trigger: GATCCAGGCTGAGCCAGACAACTTGGCACGTGCCTC...TGGCATTTTCGTCATCTGAAGCATGAGTGACAAGTTGGGAATGATGTGGTGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CAA 90 bp GGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGGGTTTTCAAGTTTTCTaGTCTAGTATCACTTTCCCT +
Preference number: 5 (lower is better)
Translates to: GSPMGYTQETPPARPEGSGFQVF*SSITFP
Trigger: AGGGAAAGTGATACTAGACAAGAAAACTTGAAAACC...CGACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CAA 90 bp TCAATCATTTCACCCTCACGTCGAGCAGCACAGCACTCAGTGGCTCTGACAACATCTCTGGATTCTGGTTaGGGCTGTTTCACTACCTCA +
Preference number: 5 (lower is better)
Translates to: SIISPSRRAAQHSVALTTSLDSG*GCFTTS
Trigger: TGAGGTAGTGAAACAGCCCAAACCAGAATCCAGAGA...TGTTGTCAGAGCCACTGAGTGCTGTGCTGCTCGACGTGAGGGTGAAATGATTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CAA 90 bp AGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTAAACTTCAATGTCCACCTGTaGACAGTAACTGCCATTGCT +
Preference number: 5 (lower is better)
Translates to: REEEDWTCLGPCSRSLVNFNVHL*TVTAIA
Trigger: AGCAATGGCAGTTACTGTCAACAGGTGGACATTGAA...GTTTACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CAA 90 bp CCGGTCTTTGGTAAACAGACGCTTAAGTTGACAACTTGGACTTGGCCAATACTGGGAATCTGGGATCTTTaGGCGGACCGCACATACTCG +
Preference number: 5 (lower is better)
Translates to: PVFGKQTLKLTTWTWPILGIWDL*ADRTYS
Trigger: CGAGTATGTGCGGTCCGCCAAAAGATCCCAGATTCC...CAGTATTGGCCAAGTCCAAGTTGTCAACTTAAGCGTCTGTTTACCAAAGACCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CAA 90 bp AGTGGAAGACTGGCATTTCTACTTAGTTCAGGTAGGTTAACTCCCTTGGTGGAGTGCCTTGCAATTCTTTaGGGGTGCTCCAGGAGCCTG +
Preference number: 5 (lower is better)
Translates to: SGRLAFLLSSGRLTPLVECLAIL*GCSRSL
Trigger: CAGGCTCCTGGAGCACCCCAAAAGAATTGCAAGGCA...CTCCACCAAGGGAGTTAACCTACCTGAACTAAGTAGAAATGCCAGTCTTCCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CAA 90 bp GAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTAAATTCCTGGAGCAGCATTaGAATTACTGTCCTGTGACA +
Preference number: 5 (lower is better)
Translates to: EGRRGLDMFGPLFPVFGKFLEQH*NYCPVT
Trigger: TGTCACAGGACAGTAATTCAAATGCTGCTCCAGGAA...TTTACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CAA 90 bp CTTTCACATACACAGGTGCGTGGAGATGCCCACTCCCATAGGGTCCAAAGTGACTTCCTGGAGCAGCATTaGAATTACTGTCCTGTGACA +
Preference number: 5 (lower is better)
Translates to: LSHTQVRGDAHSHRVQSDFLEQH*NYCPVT
Trigger: TGTCACAGGACAGTAATTCAAATGCTGCTCCAGGAA...GTCACTTTGGACCCTATGGGAGTGGGCATCTCCACGCACCTGTGTATGTGAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CAA 90 bp AACAAGGCAAGGGAAAACACACACAGGGGCATCTACTTGCTGGAAACATGTTGGCACCAGACATGGAGTTaGTGCTTGGTCCCAACTTCC +
Preference number: 5 (lower is better)
Translates to: NKARENTHRGIYLLETCWHQTWS*CLVPTS
Trigger: GGAAGTTGGGACCAAGCACAAACTCCATGTCTGGTG...CCAACATGTTTCCAGCAAGTAGATGCCCCTGTGTGTGTTTTCCCTTGCCTTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CAA 90 bp AGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTAAACAAAGTCTTCTCATTCTaGACGCTGCCAACAAAGGCA +
Preference number: 5 (lower is better)
Translates to: REEEDWTCLGPCSRSLVNKVFSF*TLPTKA
Trigger: TGCCTTTGTTGGCAGCGTCAAGAATGAGAAGACTTT...GTTTACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CAA 90 bp CAAGGCAAGGGAAAACACACACAGGGGCATCTACTTGCTGGAAACATGTTGGGAGCTGGTGGAACTCAGTaGGAGTTTAGAAAGCTTCCC +
Preference number: 5 (lower is better)
Translates to: QGKGKHTQGHLLAGNMLGAGGTQ*EFRKLP
Trigger: GGGAAGCTTTCTAAACTCCAACTGAGTTCCACCAGC...TCCCAACATGTTTCCAGCAAGTAGATGCCCCTGTGTGTGTTTTCCCTTGCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CAA 90 bp CTGGCATTTCTACTTAGTTCAGGTAGGTTAACTCCCTTGGTGGAGAATGCAACCCTTCCAGCAAGGCCTTaGGGAAAGGTGGGAGAGCTA +
Preference number: 5 (lower is better)
Translates to: LAFLLSSGRLTPLVENATLPARP*GKVGEL
Trigger: TAGCTCTCCCACCTTTCCCAAAGGCCTTGCTGGAAG...GGTTGCATTCTCCACCAAGGGAGTTAACCTACCTGAACTAAGTAGAAATGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CAA 90 bp CCGGTCTTTGGTAAACAGACGCTTAAGTTGACAACTTGGACTTGGCCAATACTGCTTCCAGCAAGGCCTTaGGGAAAGGTGGGAGAGCTA +
Preference number: 5 (lower is better)
Translates to: PVFGKQTLKLTTWTWPILLPARP*GKVGEL
Trigger: TAGCTCTCCCACCTTTCCCAAAGGCCTTGCTGGAAG...CAGTATTGGCCAAGTCCAAGTTGTCAACTTAAGCGTCTGTTTACCAAAGACCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CAA 90 bp CAGAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTAACAATACACAGAGCTTaGAGGGTCCAATACAGTCAT +
Preference number: 5 (lower is better)
Translates to: QREEEDWTCLGPCSRSLVTIHRA*RVQYSH
Trigger: ATGACTGTATTGGACCCTCAAAGCTCTGTGTATTGT...TACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CAA 90 bp CAAGTGACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCGGTAGGTTAACTCCCTaGGTGGAGAATGCAACCTTC +
Preference number: 5 (lower is better)
Translates to: QVTEGFSSVNFGGRQECSGRLTP*VENATF
Trigger: GAAGGTTGCATTCTCCACCAAGGGAGTTAACCTACC...GGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGTCACTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CAA 90 bp GAGAATGCAACCTTCTTGCTTCAGTTTCAAGTCCCTCTGGGAGTCAGGCAGTCCGAACCAAGGTCAAACTaGCTCCGTCAACTGGCAAAT +
Preference number: 5 (lower is better)
Translates to: ENATFLLQFQVPLGVRQSEPRSN*LRQLAN
Trigger: ATTTGCCAGTTGACGGAGCAAGTTTGACCTTGGTTC...GGACTGCCTGACTCCCAGAGGGACTTGAAACTGAAGCAAGAAGGTTGCATTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CAA 90 bp TCAATCATTTCACCCTCACGTCGAGCAGCACAGCACTCAGTGGCTCTGACAACAGAACCAAGGTCAAACTaGCTCCGTCAACTGGCAAAT +
Preference number: 5 (lower is better)
Translates to: SIISPSRRAAQHSVALTTEPRSN*LRQLAN
Trigger: ATTTGCCAGTTGACGGAGCAAGTTTGACCTTGGTTC...TGTTGTCAGAGCCACTGAGTGCTGTGCTGCTCGACGTGAGGGTGAAATGATTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CAA 90 bp AGATCAGTGTCAAACTGTACCCTTGAGTGTCCCCAAAGGTTCCAGCAGAGGGAAACTGGTGGTGGTGATTaGTCACATATGGCAGCAAGC +
Preference number: 5 (lower is better)
Translates to: RSVSNCTLECPQRFQQRETGGGD*SHMAAS
Trigger: GCTTGCTGCCATATGTGACAAATCACCACCACCAGT...TTCCCTCTGCTGGAACCTTTGGGGACACTCAAGGGTACAGTTTGACACTGATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CAA 90 bp GGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACAGCACTCAGTAAACAGACGCTTAAGTaGACAACTTGGACTTGGCCA +
Preference number: 5 (lower is better)
Translates to: GRSQVNHFTLTSSSTALSKQTLK*TTWTWP
Trigger: TGGCCAAGTCCAAGTTGTCAACTTAAGCGTCTGTTT...ACTGAGTGCTGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CAA 90 bp AGATCAGTGTCAAACTGTACCCTTGAGTGTCCCCAAAGGTTCCAGCAGAGGGAACCCTGTTCCCGGTCTTaGGTAAACAGACGCTTAAGT +
Preference number: 5 (lower is better)
Translates to: RSVSNCTLECPQRFQQREPCSRS*VNRRLS
Trigger: ACTTAAGCGTCTGTTTACCAAAGACCGGGAACAGGG...TTCCCTCTGCTGGAACCTTTGGGGACACTCAAGGGTACAGTTTGACACTGATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CAA 90 bp CTTGGTGGAGAATGCAACCTTCTTGCTTCAGTTTCAAGTCCCTCTGGGAGTCAGCCCTGTTCCCGGTCTTaGGTAAACAGACGCTTAAGT +
Preference number: 5 (lower is better)
Translates to: LGGECNLLASVSSPSGSQPCSRS*VNRRLS
Trigger: ACTTAAGCGTCTGTTTACCAAAGACCGGGAACAGGG...CTGACTCCCAGAGGGACTTGAAACTGAAGCAAGAAGGTTGCATTCTCCACCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CAA 90 bp GGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACAGGTTGTACGGGTTTATaGTTCCAATACCACAAGAGA +
Preference number: 5 (lower is better)
Translates to: GQPGRSQVNHFTLTSSSTGCTGL*FQYHKR
Trigger: TCTCTTGTGGTATTGGAACAATAAACCCGTACAACC...TGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CAA 90 bp TGTAATCCATCCCAGTGCTTTGTGAAGCTGTGGTGGGAAGATCACTTGAGGCCACCATCAGGCCTATATTaGTTTCCAGGTGCAGAACCG +
Preference number: 5 (lower is better)
Translates to: CNPSQCFVKLWWEDHLRPPSGLY*FPGAEP
Trigger: CGGTTCTGCACCTGGAAACAAATATAGGCCTGATGG...TGGCCTCAAGTGATCTTCCCACCACAGCTTCACAAAGCACTGGGATGGATTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555343.2
CDS-3UTR CAA 90 bp TGTAATCCATCCCAGTGCTTTGTGAAGCTGTGGTGGGAAGATCACTTGAGGCCACGCACCTGGTTTAGATaGGGAAAGCTCAACATGCCA +
Preference number: 5 (lower is better)
Translates to: CNPSQCFVKLWWEDHLRPRTWFR*GKLNMP
Trigger: TGGCATGTTGAGCTTTCCCAATCTAAACCAGGTGCG...TGGCCTCAAGTGATCTTCCCACCACAGCTTCACAAAGCACTGGGATGGATTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649901.1
CDS TCA 90 bp AAGTCCTCTGACGCTCTGAACACAAAATTCACAACCCCCATCGGTTaGACGAGACGGCTTCAAACACTCAAGTTACGCTCTCCCTTGCTA +
Preference number: 5 (lower is better)
Translates to: KSSDALNTKFTTPIG*TRRLQTLKLRSPLL
Trigger: TAGCAAGGGAGAGCGTAACTTGAGTGTTTGAAGCCGTCTCGTTCAACCGATGGGGGTTGTGAATTTTGTGTTCAGAGCGTCAGAGGACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375689.5
ENST00000649901.1
CDS TCA 90 bp AGTGGATTCAGTTCTCCTCAAAATACCAATTTCCAGTCCAGCTTCTaGAGGCAAACAGCCCAGTCTGCGTTTCTCAAAGTGGGGTCCGTG +
Preference number: 5 (lower is better)
Translates to: SGFSSPQNTNFQSSF*RQTAQSAFLKVGSV
Trigger: CACGGACCCCACTTTGAGAAACGCAGACTGGGCTGTTTGCCTTCAGAAGCTGGACTGGAAATTGGTATTTTGAGGAGAACTGAATCCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643168.1
ENST00000649901.1
CDS GCA 90 bp TTCAAAGTCAGAGGCTGTATCCGTGGACTCACCGTGAGGACTCAGTaGTTCAGAGTCTCCGTTGATTTTCAGCTTTTCAATGTCCACCTG +
Preference number: 5 (lower is better)
Translates to: FKVRGCIRGLTVRTQ*FRVSVDFQLFNVHL
Trigger: CAGGTGGACATTGAAAAGCTGAAAATCAACGGAGACTCTGAAGCACTGAGTCCTCACGGTGAGTCCACGGATACAGCCTCTGACTTTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
ENST00000647223.1
CDS CCA 90 bp CTCTCCAACCTGGGGCTCAACAGATGGTATGTGTTCTCTGGATTCTaGTTTGGGCTGTTTCACTACCTCATCATTCGATGGGATGGGTAT +
Preference number: 5 (lower is better)
Translates to: LSNLGLNRWYVFSGF*FGLFHYLIIRWDGY
Trigger: ATACCCATCCCATCGAATGATGAGGTAGTGAAACAGCCCAAACCAGAATCCAGAGAACACATACCATCTGTTGAGCCCCAGGTTGGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
ENST00000647223.1
CDS CCA 90 bp TGCAGGAAGCTAGAGAGGGCACGAGGGCAGATGGTAAGACCCATGTaGAGGGATCAAGAATTTGATTGTTCCGGAGTCACTGAAGAATAT +
Preference number: 5 (lower is better)
Translates to: CRKLERARGQMVRPM*RDQEFDCSGVTEEY
Trigger: ATATTCTTCAGTGACTCCGGAACAATCAAATTCTTGATCCCTCCACATGGGTCTTACCATCTGCCCTCGTGCCCTCTCTAGCTTCCTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644060.1
CDS-3UTR CAA 90 bp CTTTCACATACACAGGTGCGTGGAGATGCCCACTCCCATAGGGTCCAAAGTGACGTCTTTTTCTTTTGTTaGTTCGCCTGTGAGGAAGCT +
Preference number: 5 (lower is better)
Translates to: LSHTQVRGDAHSHRVQSDVFFFC*FACEEA
Trigger: AGCTTCCTCACAGGCGAACAAACAAAAGAAAAAGAC...GTCACTTTGGACCCTATGGGAGTGGGCATCTCCACGCACCTGTGTATGTGAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CAA 90 bp AGTTCAGGTAGGTTAACTCCCTTGGTGGAGAATGCAACCTTCTTGCTTCAGTTTTCTGTTGCGCTTCATTaGACCTGTGGCTGGCTTCCG +
Preference number: 5 (lower is better)
Translates to: SSGRLTPLVENATFLLQFSVALH*TCGWLP
Trigger: CGGAAGCCAGCCACAGGTCAAATGAAGCGCAACAGA...AAACTGAAGCAAGAAGGTTGCATTCTCCACCAAGGGAGTTAACCTACCTGAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
CDS-3UTR CAA 90 bp CCGGTCTTTGGTAAACAGACGCTTAAGTTGACAACTTGGACTTGGCCAATACTGATCAGGGCACGGAGGTaGGTGTTGACAAGAATGGAC +
Preference number: 5 (lower is better)
Translates to: PVFGKQTLKLTTWTWPILIRARR*VLTRMD
Trigger: GTCCATTCTTGTCAACACCAACCTCCGTGCCCTGAT...CAGTATTGGCCAAGTCCAAGTTGTCAACTTAAGCGTCTGTTTACCAAAGACCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CAA 90 bp CAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACAGCACTGTCGTATCCTGACTaGCATCTCATGAGTAAATTC +
Preference number: 5 (lower is better)
Translates to: QPGRSQVNHFTLTSSSTALSYPD*HLMSKF
Trigger: GAATTTACTCATGAGATGCAAGTCAGGATACGACAG...TGCTGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CAA 90 bp CCGGTCTTTGGTAAACAGACGCTTAAGTTGACAACTTGGACTTGGCCAATACTGAGGAACGGTGGGTCCTaGCTCCTCATCATCACTTTC +
Preference number: 5 (lower is better)
Translates to: PVFGKQTLKLTTWTWPILRNGGS*LLIITF
Trigger: GAAAGTGATGATGAGGAGCAAGGACCCACCGTTCCT...CAGTATTGGCCAAGTCCAAGTTGTCAACTTAAGCGTCTGTTTACCAAAGACCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CAA 90 bp GCCTTGGGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGTTTTCAAGTTTTCTaGTCTAGTATCACTTTCCCT +
Preference number: 5 (lower is better)
Translates to: ALGSPMGYTQETPPARPEGFQVF*SSITFP
Trigger: AGGGAAAGTGATACTAGACAAGAAAACTTGAAAACC...TTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCCCAAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CAA 90 bp CAAGTGACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCTCTCTGGATTCTGGTTaGGGCTGTTTCACTACCTCA +
Preference number: 5 (lower is better)
Translates to: QVTEGFSSVNFGGRQECSSLDSG*GCFTTS
Trigger: TGAGGTAGTGAAACAGCCCAAACCAGAATCCAGAGA...GGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGTCACTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CAA 90 bp AAAAGTACGTCAAAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGGTATTTTGGGTTTCTCATCCTaGTCCACCGAAGATCCCTTT +
Preference number: 5 (lower is better)
Translates to: KSTSKGASQSQESMVPGILGFSS*STEDPF
Trigger: AAAGGGATCTTCGGTGGACAAGGATGAGAAACCCAA...AATACCTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTTTGACGTACTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CAA 90 bp CCGGTCTTTGGTAAACAGACGCTTAAGTTGACAACTTGGACTTGGCCAATACTGGGACAGTGGGGCAGATaGGTTCCAATTGGGTTTCTC +
Preference number: 5 (lower is better)
Translates to: PVFGKQTLKLTTWTWPILGQWGR*VPIGFL
Trigger: GAGAAACCCAATTGGAACCAATCTGCCCCACTGTCC...CAGTATTGGCCAAGTCCAAGTTGTCAACTTAAGCGTCTGTTTACCAAAGACCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CAA 90 bp TTTGTTTCTTCCCAAACCTGCCTGATGTCAAAAGTACGTCAAAAGGAGCCTCACGGAATCTGGGATCTTTaGGCGGACCGCACATACTCG +
Preference number: 5 (lower is better)
Translates to: FVSSQTCLMSKVRQKEPHGIWDL*ADRTYS
Trigger: CGAGTATGTGCGGTCCGCCAAAAGATCCCAGATTCC...GTGAGGCTCCTTTTGACGTACTTTTGACATCAGGCAGGTTTGGGAAGAAACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CAA 90 bp ACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCTGCCTAAAACTTGGGACTGCCTaGCAATTCTTTTGGGGTGCT +
Preference number: 5 (lower is better)
Translates to: TEGFSSVNFGGRQECSCLKLGTA*QFFWGA
Trigger: AGCACCCCAAAAGAATTGCAAGGCAGTCCCAAGTTT...TAGGCAGGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CAA 90 bp GTGACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCTGCCAAAGGAGATCACATTaGGAGATGAGAAACGAGGTG +
Preference number: 5 (lower is better)
Translates to: VTEGFSSVNFGGRQECSCQRRSH*EMRNEV
Trigger: CACCTCGTTTCTCATCTCCAAATGTGATCTCCTTTG...GCAGGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGTCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CAA 90 bp AGTGGAAGACTGGCATTTCTACTTAGTTCAGGTAGGTTAACTCCCTTGGTGGAGGCACCAAAGTTTGCTTaGTGGCTCAGCTGCACCACA +
Preference number: 5 (lower is better)
Translates to: SGRLAFLLSSGRLTPLVEAPKFA*WLSCTT
Trigger: TGTGGTGCAGCTGAGCCACAAAGCAAACTTTGGTGC...CTCCACCAAGGGAGTTAACCTACCTGAACTAAGTAGAAATGCCAGTCTTCCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CAA 90 bp GCCTTGGGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAAGAAAAGTTCCAAATTaGCTTCAGCAACAGAACCAA +
Preference number: 5 (lower is better)
Translates to: ALGSPMGYTQETPPARPERKVPN*LQQQNQ
Trigger: TTGGTTCTGTTGCTGAAGCAAATTTGGAACTTTTCT...TTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCCCAAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CAA 90 bp AGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCCAAGTGACAGAGGGCTTTAGCAGAAAAGTTCCAAATTaGCTTCAGCAACAGAACCAA +
Preference number: 5 (lower is better)
Translates to: RKPLQQDQKGRQVTEGFSRKVPN*LQQQNQ
Trigger: TTGGTTCTGTTGCTGAAGCAAATTTGGAACTTTTCT...GCTAAAGCCCTCTGTCACTTGGCGACCCTTCTGGTCTTGCTGGAGGGGTTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CAA 90 bp CTGGCATTTCTACTTAGTTCAGGTAGGTTAACTCCCTTGGTGGAGAATGCAACCAAAAGCAAGATGCGTTaGCTCGGTGGCATGTGGGCA +
Preference number: 5 (lower is better)
Translates to: LAFLLSSGRLTPLVENATKSKMR*LGGMWA
Trigger: TGCCCACATGCCACCGAGCAAACGCATCTTGCTTTT...GGTTGCATTCTCCACCAAGGGAGTTAACCTACCTGAACTAAGTAGAAATGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CAA 90 bp GGGGGTAGTGGAAGACTGGCATTTCTACTTAGTTCAGGTAGGTTAACTCCCTTGCCCTGTTCCCGGTCTTaGGTAAACAGACGCTTAAGT +
Preference number: 5 (lower is better)
Translates to: GGSGRLAFLLSSGRLTPLPCSRS*VNRRLS
Trigger: ACTTAAGCGTCTGTTTACCAAAGACCGGGAACAGGG...CAAGGGAGTTAACCTACCTGAACTAAGTAGAAATGCCAGTCTTCCACTACCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CAA 90 bp AGCTGTAGACTAACAGACCACTCCCAAGCTTACAGCAGGTTCATACAATGGTGTGCAGTGGCTCACACCTaGAGCGTGAAAAGGCTGATT +
Preference number: 5 (lower is better)
Translates to: SCRLTDHSQAYSRFIQWCAVAHT*SVKRLI
Trigger: AATCAGCCTTTTCACGCTCAAGGTGTGAGCCACTGC...ACACCATTGTATGAACCTGCTGTAAGCTTGGGAGTGGTCTGTTAGTCTACAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375689.5
ENST00000542461.5
ENST00000646367.1
CDS-3UTR CAA 90 bp AGTGGAAGACTGGCATTTCTACTTAGTTCAGGTAGGTTAACTCCCTTGGTGGAGAAGCTCAACATGCCATaGGCGTCCTTGAATGTGGGG +
Preference number: 5 (lower is better)
Translates to: SGRLAFLLSSGRLTPLVEKLNMP*ASLNVG
Trigger: CCCCACATTCAAGGACGCCAATGGCATGTTGAGCTT...CTCCACCAAGGGAGTTAACCTACCTGAACTAAGTAGAAATGCCAGTCTTCCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646985.1
CDS-3UTR CAA 90 bp CAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACAGCAAATACCTGGTTTAGATaGGGAAAGCTCAACATGCCA +
Preference number: 5 (lower is better)
Translates to: QPGRSQVNHFTLTSSSTANTWFR*GKLNMP
Trigger: TGGCATGTTGAGCTTTCCCAATCTAAACCAGGTATT...TGCTGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646985.1
CDS TCA 90 bp TATCCGTGGACTCACCGTGAGGACTCAGTGCTTCAGAGTCTCCGTTaGTTTTCAGCTTTTCAATGTCCACCTGTTGACAGTAACTGCCAT +
Preference number: 5 (lower is better)
Translates to: YPWTHREDSVLQSLR*FSAFQCPPVDSNCH
Trigger: ATGGCAGTTACTGTCAACAGGTGGACATTGAAAAGCTGAAAATCAACGGAGACTCTGAAGCACTGAGTCCTCACGGTGAGTCCACGGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
ENST00000647223.1
CDS TCA 90 bp ATGCTGCCAGCAATACTGGGATGCTTCCATCTCCCAGCCTTAGGCTaGGAGAAACCACCACTTCATGGTCTGGCTTTAAAATATCACCTT +
Preference number: 5 (lower is better)
Translates to: MLPAILGCFHLPALG*EKPPLHGLALKYHL
Trigger: AAGGTGATATTTTAAAGCCAGACCATGAAGTGGTGGTTTCTCTCAGCCTAAGGCTGGGAGATGGAAGCATCCCAGTATTGCTGGCAGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470145.3
ENST00000647223.1
CDS GCA 90 bp GTCCAGTCCATCCTAACCTGTATATTCTTTCCAGGTTACTGTCATTaGCATCAAACCCAGGAGAACACTTGGGGTTGCATCTCCTCAGAC +
Preference number: 5 (lower is better)
Translates to: VQSILTCIFFPGYCH*HQTQENTWGCISSD
Trigger: GTCTGAGGAGATGCAACCCCAAGTGTTCTCCTGGGTTTGATGGCAATGACAGTAACCTGGAAAGAATATACAGGTTAGGATGGACTGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647223.1
CDS CCA 90 bp CAACCTGGGGCTCAACAGATGGTATGTGTTCTCTGGATTCTGGTTTaGGCTGTTTCACTACCTCATCATTCGATGGGATGGGTATCCAAT +
Preference number: 5 (lower is better)
Translates to: QPGAQQMVCVLWILV*AVSLPHHSMGWVSN
Trigger: ATTGGATACCCATCCCATCGAATGATGAGGTAGTGAAACAGCCCAAACCAGAATCCAGAGAACACATACCATCTGTTGAGCCCCAGGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
ENST00000647223.1
CDS CCA 90 bp ATGCTTCCATCTCCCAGCCTTAGGCTGAGAGAAACCACCACTTCATaGTCTGGCTTTAAAATATCACCTTACAGGTGCCAAACTGCCATC +
Preference number: 5 (lower is better)
Translates to: MLPSPSLRLRETTTS*SGFKISPYRCQTAI
Trigger: GATGGCAGTTTGGCACCTGTAAGGTGATATTTTAAAGCCAGACCATGAAGTGGTGGTTTCTCTCAGCCTAAGGCTGGGAGATGGAAGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470145.3
ENST00000647223.1
CDS-3UTR CAA 90 bp CCGGTCTTTGGTAAACAGACGCTTAAGTTGACAACTTGGACTTGGCCAATACTGGAATGTAGCATAGCATaGAGGCATGCGAGAGGGGAA +
Preference number: 5 (lower is better)
Translates to: PVFGKQTLKLTTWTWPILECSIA*RHARGE
Trigger: TTCCCCTCTCGCATGCCTCAATGCTATGCTACATTC...CAGTATTGGCCAAGTCCAAGTTGTCAACTTAAGCGTCTGTTTACCAAAGACCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CAA 90 bp ACAAGCTGTAGACTAACAGACCACTCCCAAGCTTACAGCAGGTTCATACAATGGGAATGTAGCATAGCATaGAGGCATGCGAGAGGGGAA +
Preference number: 5 (lower is better)
Translates to: TSCRLTDHSQAYSRFIQWECSIA*RHARGE
Trigger: TTCCCCTCTCGCATGCCTCAATGCTATGCTACATTC...CCATTGTATGAACCTGCTGTAAGCTTGGGAGTGGTCTGTTAGTCTACAGCTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375689.5
ENST00000542461.5
ENST00000646367.1
CDS-3UTR CAA 90 bp AGCTGTAGACTAACAGACCACTCCCAAGCTTACAGCAGGTTCATACAATGGTGTGAATGTAGCATAGCATaGAGGCATGCGAGAGGGGAA +
Preference number: 5 (lower is better)
Translates to: SCRLTDHSQAYSRFIQWCECSIA*RHARGE
Trigger: TTCCCCTCTCGCATGCCTCAATGCTATGCTACATTC...ACACCATTGTATGAACCTGCTGTAAGCTTGGGAGTGGTCTGTTAGTCTACAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375689.5
ENST00000542461.5
ENST00000646367.1
CDS-3UTR CAA 90 bp GTGACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCTGCCTGTCGTATCCTGACTaGCATCTCATGAGTAAATTC +
Preference number: 5 (lower is better)
Translates to: VTEGFSSVNFGGRQECSCLSYPD*HLMSKF
Trigger: GAATTTACTCATGAGATGCAAGTCAGGATACGACAG...GCAGGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGTCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CAA 90 bp CAGAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTAGGTTTTCAAGTTTTCTaGTCTAGTATCACTTTCCCT +
Preference number: 5 (lower is better)
Translates to: QREEEDWTCLGPCSRSLVGFQVF*SSITFP
Trigger: AGGGAAAGTGATACTAGACAAGAAAACTTGAAAACC...TACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CAA 90 bp GGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACATTAGAAACGAGAGCCTaGGTTTTCAAGTTTTCTTGT +
Preference number: 5 (lower is better)
Translates to: GQPGRSQVNHFTLTSSSTLETRA*VFKFSC
Trigger: ACAAGAAAACTTGAAAACCAAGGCTCTCGTTTCTAA...TGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CAA 90 bp CAAGGCAAGGGAAAACACACACAGGGGCATCTACTTGCTGGAAACATGTTGGGATTCAATGTCCACCTGTaGACAGTAACTGCCATTGCT +
Preference number: 5 (lower is better)
Translates to: QGKGKHTQGHLLAGNMLGFNVHL*TVTAIA
Trigger: AGCAATGGCAGTTACTGTCAACAGGTGGACATTGAA...TCCCAACATGTTTCCAGCAAGTAGATGCCCCTGTGTGTGTTTTCCCTTGCCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CAA 90 bp AGATCAGTGTCAAACTGTACCCTTGAGTGTCCCCAAAGGTTCCAGCAGAGGGAATTCAATGTCCACCTGTaGACAGTAACTGCCATTGCT +
Preference number: 5 (lower is better)
Translates to: RSVSNCTLECPQRFQQREFNVHL*TVTAIA
Trigger: AGCAATGGCAGTTACTGTCAACAGGTGGACATTGAA...TTCCCTCTGCTGGAACCTTTGGGGACACTCAAGGGTACAGTTTGACACTGATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CAA 90 bp AACAAGGCAAGGGAAAACACACACAGGGGCATCTACTTGCTGGAAACATGTTGGTTGGGTTTCTCATCCTaGTCCACCGAAGATCCCTTT +
Preference number: 5 (lower is better)
Translates to: NKARENTHRGIYLLETCWLGFSS*STEDPF
Trigger: AAAGGGATCTTCGGTGGACAAGGATGAGAAACCCAA...CCAACATGTTTCCAGCAAGTAGATGCCCCTGTGTGTGTTTTCCCTTGCCTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CAA 90 bp AGTTCAGGTAGGTTAACTCCCTTGGTGGAGAATGCAACCTTCTTGCTTCAGTTTATGTCACCATTCACCTaGGACAGTGGGGCAGATTGG +
Preference number: 5 (lower is better)
Translates to: SSGRLTPLVENATFLLQFMSPFT*DSGADW
Trigger: CCAATCTGCCCCACTGTCCAAGGTGAATGGTGACAT...AAACTGAAGCAAGAAGGTTGCATTCTCCACCAAGGGAGTTAACCTACCTGAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CAA 90 bp CCGGTCTTTGGTAAACAGACGCTTAAGTTGACAACTTGGACTTGGCCAATACTGGGAGGGAGTCAAAACTaGGGACTGCCTTGCAATTCT +
Preference number: 5 (lower is better)
Translates to: PVFGKQTLKLTTWTWPILGGSQN*GLPCNS
Trigger: AGAATTGCAAGGCAGTCCCAAGTTTTGACTCCCTCC...CAGTATTGGCCAAGTCCAAGTTGTCAACTTAAGCGTCTGTTTACCAAAGACCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CAA 90 bp AGATCAGTGTCAAACTGTACCCTTGAGTGTCCCCAAAGGTTCCAGCAGAGGGAATTCCTGGAGCAGCATTaGAATTACTGTCCTGTGACA +
Preference number: 5 (lower is better)
Translates to: RSVSNCTLECPQRFQQREFLEQH*NYCPVT
Trigger: TGTCACAGGACAGTAATTCAAATGCTGCTCCAGGAA...TTCCCTCTGCTGGAACCTTTGGGGACACTCAAGGGTACAGTTTGACACTGATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CAA 90 bp CAAGTGACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCAAAAAGCTTCTTCCCTaGGCCTGTAACATTGCTCTG +
Preference number: 5 (lower is better)
Translates to: QVTEGFSSVNFGGRQECSKKLLP*ACNIAL
Trigger: CAGAGCAATGTTACAGGCCAAGGGAAGAAGCTTTTT...GGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGTCACTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CAA 90 bp TTTGTTTCTTCCCAAACCTGCCTGATGTCAAAAGTACGTCAAAAGGAGCCTCACCACCAGACATGGAGTTaGTGCTTGGTCCCAACTTCC +
Preference number: 5 (lower is better)
Translates to: FVSSQTCLMSKVRQKEPHHQTWS*CLVPTS
Trigger: GGAAGTTGGGACCAAGCACAAACTCCATGTCTGGTG...GTGAGGCTCCTTTTGACGTACTTTTGACATCAGGCAGGTTTGGGAAGAAACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CAA 90 bp CTTGGTGGAGAATGCAACCTTCTTGCTTCAGTTTCAAGTCCCTCTGGGAGTCAGAAAGTCTTCTCATTCTaGACGCTGCCAACAAAGGCA +
Preference number: 5 (lower is better)
Translates to: LGGECNLLASVSSPSGSQKVFSF*TLPTKA
Trigger: TGCCTTTGTTGGCAGCGTCAAGAATGAGAAGACTTT...CTGACTCCCAGAGGGACTTGAAACTGAAGCAAGAAGGTTGCATTCTCCACCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CAA 90 bp GCAAGAACCCTCAACTCTGTAATAAGTCGAAATACAAGATATAAGGCAGGAAACTCAGGCTGGCTGGCCTaGGGCAGCCCAATGGGTTAT +
Preference number: 5 (lower is better)
Translates to: ARTLNSVISRNTRYKAGNSGWLA*GSPMGY
Trigger: ATAACCCATTGGGCTGCCCAAGGCCAGCCAGCCTGA...GTTTCCTGCCTTATATCTTGTATTTCGACTTATTACAGAGTTGAGGGTTCTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CAA 90 bp CTTGGTGGAGAATGCAACCTTCTTGCTTCAGTTTCAAGTCCCTCTGGGAGTCAGGAGAATGCAACCTTCTaGCTTCAGTTTCAAGTCCCT +
Preference number: 5 (lower is better)
Translates to: LGGECNLLASVSSPSGSQENATF*LQFQVP
Trigger: AGGGACTTGAAACTGAAGCAAGAAGGTTGCATTCTC...CTGACTCCCAGAGGGACTTGAAACTGAAGCAAGAAGGTTGCATTCTCCACCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CAA 90 bp GACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTAGAAAAGTTCCAAATTaGCTTCAGCAACAGAACCAA +
Preference number: 5 (lower is better)
Translates to: DPTGHRATWQVTSQSFHPRKVPN*LQQQNQ
Trigger: TTGGTTCTGTTGCTGAAGCAAATTTGGAACTTTTCT...AGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CAA 90 bp GAGATGCCCACTCCCATAGGGTCCAAAGTGACAGGGAGGATGTCAAGCAGAGGAAGAAAAGTTCCAAATTaGCTTCAGCAACAGAACCAA +
Preference number: 5 (lower is better)
Translates to: EMPTPIGSKVTGRMSSRGRKVPN*LQQQNQ
Trigger: TTGGTTCTGTTGCTGAAGCAAATTTGGAACTTTTCT...TCCTCTGCTTGACATCCTCCCTGTCACTTTGGACCCTATGGGAGTGGGCATCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CAA 90 bp AACAAGGCAAGGGAAAACACACACAGGGGCATCTACTTGCTGGAAACATGTTGGTATTCCCCAACCCCATaGTCCAAGCAGAGCTATTCA +
Preference number: 5 (lower is better)
Translates to: NKARENTHRGIYLLETCWYSPTP*SKQSYS
Trigger: TGAATAGCTCTGCTTGGACAATGGGGTTGGGGAATA...CCAACATGTTTCCAGCAAGTAGATGCCCCTGTGTGTGTTTTCCCTTGCCTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CAA 90 bp TGTAATCCATCCCAGTGCTTTGTGAAGCTGTGGTGGGAAGATCACTTGAGGCCAAACACACAAAACTCATaGTCGAGGAGGAGAACGAGA +
Preference number: 5 (lower is better)
Translates to: CNPSQCFVKLWWEDHLRPNTQNS*SRRRTR
Trigger: TCTCGTTCTCCTCCTCGACAATGAGTTTTGTGTGTT...TGGCCTCAAGTGATCTTCCCACCACAGCTTCACAAAGCACTGGGATGGATTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555343.2
CDS-3UTR CAA 90 bp TGTAATCCATCCCAGTGCTTTGTGAAGCTGTGGTGGGAAGATCACTTGAGGCCAGCAAGACTTCATCTCTaGAGCGTGAAAAGGCTGATT +
Preference number: 5 (lower is better)
Translates to: CNPSQCFVKLWWEDHLRPARLHL*SVKRLI
Trigger: AATCAGCCTTTTCACGCTCAAGAGATGAAGTCTTGC...TGGCCTCAAGTGATCTTCCCACCACAGCTTCACAAAGCACTGGGATGGATTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000555343.2
ENST00000642676.1
ENST00000644587.1
ENST00000645035.1
ENST00000645337.1
ENST00000649901.1
CDS TCA 90 bp GGTGTGGAACTGGGGGTCACATTTACAGGATCCTTCATAGTGGGATaGCTGTCAAGAGCTTGGCCAGTTCCTTTCTCTAATGTATCATCT +
Preference number: 5 (lower is better)
Translates to: GVELGVTFTGSFIVG*LSRAWPVPFSNVSS
Trigger: AGATGATACATTAGAGAAAGGAACTGGCCAAGCTCTTGACAGTCATCCCACTATGAAGGATCCTGTAAATGTGACCCCCAGTTCCACACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
ENST00000647223.1
CDS GCA 90 bp GTTGCGCTTCATTTGACCTGTATATTCTTTCCAGGTTACTGTCATTaGCATCAAACCCAGGAGAACACTTGGGGTTGCATCTCCTCAGAC +
Preference number: 5 (lower is better)
Translates to: VALHLTCIFFPGYCH*HQTQENTWGCISSD
Trigger: GTCTGAGGAGATGCAACCCCAAGTGTTCTCCTGGGTTTGATGGCAATGACAGTAACCTGGAAAGAATATACAGGTCAAATGAAGCGCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553345.5
CDS GCA 90 bp TTGGTGACAGCACCCAAGCTACCCAGGAGTTATCTGCACACAATCTaGTCAATTGTCCAGTCCATCCTAACCTGTATATTCTTTCCAGGT +
Preference number: 5 (lower is better)
Translates to: LVTAPKLPRSYLHTI*SIVQSILTCIFFPG
Trigger: ACCTGGAAAGAATATACAGGTTAGGATGGACTGGACAATTGAGCAGATTGTGTGCAGATAACTCCTGGGTAGCTTGGGTGCTGTCACCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647223.1
CDS CCA 90 bp TCTAAAGAGACTCTAACAAGTAAAACTCTGGCAAGCAAATTTCCTTaGGTGCCCAGGGTCATAAACACCCGCATAACAGGAACGCCAAGG +
Preference number: 5 (lower is better)
Translates to: SKETLTSKTLASKFP*VPRVINTRITGTPR
Trigger: CCTTGGCGTTCCTGTTATGCGGGTGTTTATGACCCTGGGCACCCAAGGAAATTTGCTTGCCAGAGTTTTACTTGTTAGAGTCTCTTTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555343.2
CDS-3UTR CAA 90 bp ACCTGTAATCCATCCCAGTGCTTTGTGAAGCTGTGGTGGGAAGATCACTTGAGGTCTGTTTTGGTGTCATaGGAGCATCCGAGTAGTTTT +
Preference number: 5 (lower is better)
Translates to: TCNPSQCFVKLWWEDHLRSVLVS*EHPSSF
Trigger: AAAACTACTCGGATGCTCCAATGACACCAAAACAGA...CCTCAAGTGATCTTCCCACCACAGCTTCACAAAGCACTGGGATGGATTACAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000555343.2
ENST00000642676.1
ENST00000645035.1
ENST00000645337.1
ENST00000649901.1
CDS-3UTR CAA 90 bp TGTAATCCATCCCAGTGCTTTGTGAAGCTGTGGTGGGAAGATCACTTGAGGCCATCTCCTCCTCTTGAATaGGAATGTAGCATAGCATTG +
Preference number: 5 (lower is better)
Translates to: CNPSQCFVKLWWEDHLRPSPPLE*ECSIAL
Trigger: CAATGCTATGCTACATTCCAATTCAAGAGGAGGAGA...TGGCCTCAAGTGATCTTCCCACCACAGCTTCACAAAGCACTGGGATGGATTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000555343.2
ENST00000642676.1
ENST00000644587.1
ENST00000645035.1
ENST00000645337.1
ENST00000649901.1
CDS-3UTR CAA 90 bp CTTGGTGGAGAATGCAACCTTCTTGCTTCAGTTTCAAGTCCCTCTGGGAGTCAGTCTCCTCCTCTTGAATaGGAATGTAGCATAGCATTG +
Preference number: 5 (lower is better)
Translates to: LGGECNLLASVSSPSGSQSPPLE*ECSIAL
Trigger: CAATGCTATGCTACATTCCAATTCAAGAGGAGGAGA...CTGACTCCCAGAGGGACTTGAAACTGAAGCAAGAAGGTTGCATTCTCCACCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CAA 90 bp ACCTGTAATCCATCCCAGTGCTTTGTGAAGCTGTGGTGGGAAGATCACTTGAGGTCTCCTCCTCTTGAATaGGAATGTAGCATAGCATTG +
Preference number: 5 (lower is better)
Translates to: TCNPSQCFVKLWWEDHLRSPPLE*ECSIAL
Trigger: CAATGCTATGCTACATTCCAATTCAAGAGGAGGAGA...CCTCAAGTGATCTTCCCACCACAGCTTCACAAAGCACTGGGATGGATTACAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000555343.2
ENST00000642676.1
ENST00000645035.1
ENST00000645337.1
ENST00000649901.1
CDS-3UTR CAA 90 bp CAAGGCAAGGGAAAACACACACAGGGGCATCTACTTGCTGGAAACATGTTGGGAGTCTTTTTCTTTTGTTaGTTCGCCTGTGAGGAAGCT +
Preference number: 5 (lower is better)
Translates to: QGKGKHTQGHLLAGNMLGVFFFC*FACEEA
Trigger: AGCTTCCTCACAGGCGAACAAACAAAAGAAAAAGAC...TCCCAACATGTTTCCAGCAAGTAGATGCCCCTGTGTGTGTTTTCCCTTGCCTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CAA 90 bp CAAGTGACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCTCTGACTCCTGTTTTTaGTACAGATTCCTTCTGGCT +
Preference number: 5 (lower is better)
Translates to: QVTEGFSSVNFGGRQECSSDSCF*YRFLLA
Trigger: AGCCAGAAGGAATCTGTACAAAAAACAGGAGTCAGA...GGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGTCACTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CAA 90 bp CAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACAGCATTAGAAACGAGAGCCTaGGTTTTCAAGTTTTCTTGT +
Preference number: 5 (lower is better)
Translates to: QPGRSQVNHFTLTSSSTALETRA*VFKFSC
Trigger: ACAAGAAAACTTGAAAACCAAGGCTCTCGTTTCTAA...TGCTGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CAA 90 bp AGTGGAAGACTGGCATTTCTACTTAGTTCAGGTAGGTTAACTCCCTTGGTGGAGTTGGGTTTCTCATCCTaGTCCACCGAAGATCCCTTT +
Preference number: 5 (lower is better)
Translates to: SGRLAFLLSSGRLTPLVELGFSS*STEDPF
Trigger: AAAGGGATCTTCGGTGGACAAGGATGAGAAACCCAA...CTCCACCAAGGGAGTTAACCTACCTGAACTAAGTAGAAATGCCAGTCTTCCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CAA 90 bp ACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCTGCCTAGAAGAGAACTGCTCTTaGGAATCCATTTCTTCCAGT +
Preference number: 5 (lower is better)
Translates to: TEGFSSVNFGGRQECSCLEENCS*ESISSS
Trigger: ACTGGAAGAAATGGATTCCAAAGAGCAGTTCTCTTC...TAGGCAGGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CAA 90 bp GGGGGTAGTGGAAGACTGGCATTTCTACTTAGTTCAGGTAGGTTAACTCCCTTGTTCCTGGAGCAGCATTaGAATTACTGTCCTGTGACA +
Preference number: 5 (lower is better)
Translates to: GGSGRLAFLLSSGRLTPLFLEQH*NYCPVT
Trigger: TGTCACAGGACAGTAATTCAAATGCTGCTCCAGGAA...CAAGGGAGTTAACCTACCTGAACTAAGTAGAAATGCCAGTCTTCCACTACCCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CAA 90 bp CAAGGCAAGGGAAAACACACACAGGGGCATCTACTTGCTGGAAACATGTTGGGAACAATACACAGAGCTTaGAGGGTCCAATACAGTCAT +
Preference number: 5 (lower is better)
Translates to: QGKGKHTQGHLLAGNMLGTIHRA*RVQYSH
Trigger: ATGACTGTATTGGACCCTCAAAGCTCTGTGTATTGT...TCCCAACATGTTTCCAGCAAGTAGATGCCCCTGTGTGTGTTTTCCCTTGCCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CAA 90 bp AACAAGGCAAGGGAAAACACACACAGGGGCATCTACTTGCTGGAAACATGTTGGAAACAGACGCTTAAGTaGACAACTTGGACTTGGCCA +
Preference number: 5 (lower is better)
Translates to: NKARENTHRGIYLLETCWKQTLK*TTWTWP
Trigger: TGGCCAAGTCCAAGTTGTCAACTTAAGCGTCTGTTT...CCAACATGTTTCCAGCAAGTAGATGCCCCTGTGTGTGTTTTCCCTTGCCTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CAA 90 bp AACTCTGTAATAAGTCGAAATACAAGATATAAGGCAGGAAACAAGGCAAGGGAAGAGGACTGGACATGTTaGGGCCCCTGTTCCCGGTCT +
Preference number: 5 (lower is better)
Translates to: NSVISRNTRYKAGNKAREEDWTC*GPCSRS
Trigger: AGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTC...TTCCCTTGCCTTGTTTCCTGCCTTATATCTTGTATTTCGACTTATTACAGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CAA 90 bp CACAACGAATATCAGAGAAGTGATGCCTATGGATGTAAAAGGCCAATGAACAAGCACAACCCCCATCGGTaGAACGAGACGGCTTCAAAC +
Preference number: 5 (lower is better)
Translates to: HNEYQRSDAYGCKRPMNKHNPHR*NETASN
Trigger: GTTTGAAGCCGTCTCGTTCAACCGATGGGGGTTGTG...CTTGTTCATTGGCCTTTTACATCCATAGGCATCACTTCTCTGATATTCGTTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375689.5
CDS-3UTR CAA 90 bp TGTAATCCATCCCAGTGCTTTGTGAAGCTGTGGTGGGAAGATCACTTGAGGCCAAATACCTGGTTTAGATaGGGAAAGCTCAACATGCCA +
Preference number: 5 (lower is better)
Translates to: CNPSQCFVKLWWEDHLRPNTWFR*GKLNMP
Trigger: TGGCATGTTGAGCTTTCCCAATCTAAACCAGGTATT...TGGCCTCAAGTGATCTTCCCACCACAGCTTCACAAAGCACTGGGATGGATTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645035.1
CDS GCA 90 bp GAGAGCTCTCTCCCACTCCCCATCAGGCCTATATTTGTTTCCAGGTaGAGAACCGTTAGAGAAATCCTGAAATTTCTACAAGATCCTGAA +
Preference number: 5 (lower is better)
Translates to: ESSLPLPIRPIFVSR*RTVREILKFLQDPE
Trigger: TTCAGGATCTTGTAGAAATTTCAGGATTTCTCTAACGGTTCTGCACCTGGAAACAAATATAGGCCTGATGGGGAGTGGGAGAGAGCTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555343.2
ENST00000645688.1
CDS CCA 90 bp TTTCTAATACCTCTAACAAGTAAAACTCTGGCAAGCAAATTTCCTTaGGTGCCCAGGGTCATAAACACCCGCATAACAGGAACGCCAAGG +
Preference number: 5 (lower is better)
Translates to: FLIPLTSKTLASKFP*VPRVINTRITGTPR
Trigger: CCTTGGCGTTCCTGTTATGCGGGTGTTTATGACCCTGGGCACCCAAGGAAATTTGCTTGCCAGAGTTTTACTTGTTAGAGGTATTAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645688.1
CDS-3UTR CAA 90 bp GAGCACAACGAATATCAGAGAAGTGATGCCTATGGATGTAAAAGGCCAATGAACCCTGCAGAATCTGTTTaGGTGTCATTGGAGCATCCG +
Preference number: 5 (lower is better)
Translates to: EHNEYQRSDAYGCKRPMNPAESV*VSLEHP
Trigger: CGGATGCTCCAATGACACCAAAACAGATTCTGCAGG...GTTCATTGGCCTTTTACATCCATAGGCATCACTTCTCTGATATTCGTTGTGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375689.5
ENST00000542461.5
ENST00000646367.1
CDS-3UTR CAA 90 bp CAGACGCTTAAGTTGACAACTTGGACTTGGCCAATACTGCATTCTAAATCACCAACACACAAGCCACTTTaGATTTCAGCCTCCTCCTGG +
Preference number: 5 (lower is better)
Translates to: QTLKLTTWTWPILHSKSPTHKPL*ISASSW
Trigger: CCAGGAGGAGGCTGAAATCAAAAGTGGCTTGTGTGT...TGGTGATTTAGAATGCAGTATTGGCCAAGTCCAAGTTGTCAACTTAAGCGTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CAA 90 bp ACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCTGCCTATGTGAACACTTTCAATaGTGTTACGAAAGGACTGAC +
Preference number: 5 (lower is better)
Translates to: TEGFSSVNFGGRQECSCLCEHFQ*CYERTD
Trigger: GTCAGTCCTTTCGTAACACAATTGAAAGTGTTCACA...TAGGCAGGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CAA 90 bp TGTAGGAGGAGAGATGTGAAAAGCAAGATGCGTTTGCTCGGTGGCATGTGGGCATTAGAAACGAGAGCCTaGGTTTTCAAGTTTTCTTGT +
Preference number: 5 (lower is better)
Translates to: CRRRDVKSKMRLLGGMWALETRA*VFKFSC
Trigger: ACAAGAAAACTTGAAAACCAAGGCTCTCGTTTCTAA...TGCCCACATGCCACCGAGCAAACGCATCTTGCTTTTCACATCTCTCCTCCTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CAA 90 bp AGTTCAGGTAGGTTAACTCCCTTGGTGGAGAATGCAACCTTCTTGCTTCAGTTTGCAGATTGGTTCCAATaGGGTTTCTCATCCTTGTCC +
Preference number: 5 (lower is better)
Translates to: SSGRLTPLVENATFLLQFADWFQ*GFSSLS
Trigger: GGACAAGGATGAGAAACCCAATTGGAACCAATCTGC...AAACTGAAGCAAGAAGGTTGCATTCTCCACCAAGGGAGTTAACCTACCTGAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CAA 90 bp ATTAGGAAGAGACGTTCATGTTCTCTGTACAATACATCCATTTACAGAATCAGCACAGGCACACGGCTCTaGGCTGGTACTCAGTACTGG +
Preference number: 5 (lower is better)
Translates to: IRKRRSCSLYNTSIYRISTGTRL*AGTQYW
Trigger: CCAGTACTGAGTACCAGCCAAGAGCCGTGTGCCTGT...GCTGATTCTGTAAATGGATGTATTGTACAGAGAACATGAACGTCTCTTCCTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CAA 90 bp AGTGGAAGACTGGCATTTCTACTTAGTTCAGGTAGGTTAACTCCCTTGGTGGAGAAAAAGCTTCTTCCCTaGGCCTGTAACATTGCTCTG +
Preference number: 5 (lower is better)
Translates to: SGRLAFLLSSGRLTPLVEKKLLP*ACNIAL
Trigger: CAGAGCAATGTTACAGGCCAAGGGAAGAAGCTTTTT...CTCCACCAAGGGAGTTAACCTACCTGAACTAAGTAGAAATGCCAGTCTTCCACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CAA 90 bp CAGACGCTTAAGTTGACAACTTGGACTTGGCCAATACTGCATTCTAAATCACCAACTGGTGGTGGTGATTaGTCACATATGGCAGCAAGC +
Preference number: 5 (lower is better)
Translates to: QTLKLTTWTWPILHSKSPTGGGD*SHMAAS
Trigger: GCTTGCTGCCATATGTGACAAATCACCACCACCAGT...TGGTGATTTAGAATGCAGTATTGGCCAAGTCCAAGTTGTCAACTTAAGCGTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CAA 90 bp AACAAGGCAAGGGAAAACACACACAGGGGCATCTACTTGCTGGAAACATGTTGGGGTTGTACGGGTTTATaGTTCCAATACCACAAGAGA +
Preference number: 5 (lower is better)
Translates to: NKARENTHRGIYLLETCWGCTGL*FQYHKR
Trigger: TCTCTTGTGGTATTGGAACAATAAACCCGTACAACC...CCAACATGTTTCCAGCAAGTAGATGCCCCTGTGTGTGTTTTCCCTTGCCTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CAA 90 bp TGTAATCCATCCCAGTGCTTTGTGAAGCTGTGGTGGGAAGATCACTTGAGGCCACCCAACAGAGATACTTaGTCTTTGTCCAACATACAT +
Preference number: 5 (lower is better)
Translates to: CNPSQCFVKLWWEDHLRPPNRDT*SLSNIH
Trigger: ATGTATGTTGGACAAAGACAAAGTATCTCTGTTGGG...TGGCCTCAAGTGATCTTCCCACCACAGCTTCACAAAGCACTGGGATGGATTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649901.1
CDS-3UTR CAA 90 bp CTAACAGACCACTCCCAAGCTTACAGCAGGTTCATACAATGGTGTTTATTCAAAGCAGTGGCTCACACCTaGAGCGTGAAAAGGCTGATT +
Preference number: 5 (lower is better)
Translates to: LTDHSQAYSRFIQWCLFKAVAHT*SVKRLI
Trigger: AATCAGCCTTTTCACGCTCAAGGTGTGAGCCACTGC...TTTGAATAAACACCATTGTATGAACCTGCTGTAAGCTTGGGAGTGGTCTGTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375689.5
ENST00000542461.5
ENST00000646367.1
CDS-3UTR CAA 90 bp TGTAATCCATCCCAGTGCTTTGTGAAGCTGTGGTGGGAAGATCACTTGAGGCCATTTTGCACAACACCTTaGAAGCAGAAAACTCACTTC +
Preference number: 5 (lower is better)
Translates to: CNPSQCFVKLWWEDHLRPFCTTP*KQKTHF
Trigger: GAAGTGAGTTTTCTGCTTCAAAGGTGTTGTGCAAAA...TGGCCTCAAGTGATCTTCCCACCACAGCTTCACAAAGCACTGGGATGGATTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555343.2
CDS-3UTR CAA 90 bp TGTAATCCATCCCAGTGCTTTGTGAAGCTGTGGTGGGAAGATCACTTGAGGCCATCAGCATACAAACAATaGCTATTTTTGTTCCCTGGG +
Preference number: 5 (lower is better)
Translates to: CNPSQCFVKLWWEDHLRPSAYKQ*LFLFPG
Trigger: CCCAGGGAACAAAAATAGCAATTGTTTGTATGCTGA...TGGCCTCAAGTGATCTTCCCACCACAGCTTCACAAAGCACTGGGATGGATTACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555343.2
CDS TCA 90 bp CGGCTTCAAACACTCAAGTTACGCTCTCCCTTGCTAAATCCTCAGTaGACAACGTCTCCCAACAGAGATACTTTGTCTTTGTCCAACATA +
Preference number: 5 (lower is better)
Translates to: RLQTLKLRSPLLNPQ*TTSPNRDTLSLSNI
Trigger: TATGTTGGACAAAGACAAAGTATCTCTGTTGGGAGACGTTGTTCACTGAGGATTTAGCAAGGGAGAGCGTAACTTGAGTGTTTGAAGCCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375689.5
ENST00000649901.1
CDS TCA 90 bp TATCTGAAAAACTCACTAGGACTAGAGACCTGTGAGACCTTAGATTaGGCACTGCTGATGAGCTGGAAAAGCAGCAAGACAGCAAACCTA +
Preference number: 5 (lower is better)
Translates to: YLKNSLGLETCETLD*ALLMSWKSSKTANL
Trigger: TAGGTTTGCTGTCTTGCTGCTTTTCCAGCTCATCAGCAGTGCTCAATCTAAGGTCTCACAGGTCTCTAGTCCTAGTGAGTTTTTCAGATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647223.1
CDS TCA 90 bp ATAGAAAAATCTGCAGAAGCCTTCTGTGAATGGGCTGGAGAGGGATaGTCTCCATGCAGAAATGTACTAAGGACTGTTCAAAGCCAACTG +
Preference number: 5 (lower is better)
Translates to: IEKSAEAFCEWAGEG*SPCRNVLRTVQSQL
Trigger: CAGTTGGCTTTGAACAGTCCTTAGTACATTTCTGCATGGAGATCATCCCTCTCCAGCCCATTCACAGAAGGCTTCTGCAGATTTTTCTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647223.1
CDS CCA 90 bp TTCTCTGGATTCTGGTTTGGGCTGTTTCACTACCTCATCATTCGATaGGATGGGTATCCAATGCAAAGAACTGTTAGAAACGAGAGCCTT +
Preference number: 5 (lower is better)
Translates to: FSGFWFGLFHYLIIR*DGYPMQRTVRNESL
Trigger: AAGGCTCTCGTTTCTAACAGTTCTTTGCATTGGATACCCATCCCATCGAATGATGAGGTAGTGAAACAGCCCAAACCAGAATCCAGAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
ENST00000647223.1
CDS-3UTR CAA 90 bp TCAGACACAAGCTGTAGACTAACAGACCACTCCCAAGCTTACAGCAGGTTCATATCTCCTCCTCTTGAATaGGAATGTAGCATAGCATTG +
Preference number: 5 (lower is better)
Translates to: SDTSCRLTDHSQAYSRFISPPLE*ECSIAL
Trigger: CAATGCTATGCTACATTCCAATTCAAGAGGAGGAGA...TATGAACCTGCTGTAAGCTTGGGAGTGGTCTGTTAGTCTACAGCTTGTGTCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375689.5
ENST00000542461.5
ENST00000646367.1
CDS-3UTR CAA 90 bp CCGGTCTTTGGTAAACAGACGCTTAAGTTGACAACTTGGACTTGGCCAATACTGTCTCCTCCTCTTGAATaGGAATGTAGCATAGCATTG +
Preference number: 5 (lower is better)
Translates to: PVFGKQTLKLTTWTWPILSPPLE*ECSIAL
Trigger: CAATGCTATGCTACATTCCAATTCAAGAGGAGGAGA...CAGTATTGGCCAAGTCCAAGTTGTCAACTTAAGCGTCTGTTTACCAAAGACCGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CAA 90 bp CCGGTCTTTGGTAAACAGACGCTTAAGTTGACAACTTGGACTTGGCCAATACTGGTCTTTTTCTTTTGTTaGTTCGCCTGTGAGGAAGCT +
Preference number: 5 (lower is better)
Translates to: PVFGKQTLKLTTWTWPILVFFFC*FACEEA
Trigger: AGCTTCCTCACAGGCGAACAAACAAAAGAAAAAGAC...CAGTATTGGCCAAGTCCAAGTTGTCAACTTAAGCGTCTGTTTACCAAAGACCGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CAA 90 bp AGTTCAGGTAGGTTAACTCCCTTGGTGGAGAATGCAACCTTCTTGCTTCAGTTTTTCAATGTCCACCTGTaGACAGTAACTGCCATTGCT +
Preference number: 5 (lower is better)
Translates to: SSGRLTPLVENATFLLQFFNVHL*TVTAIA
Trigger: AGCAATGGCAGTTACTGTCAACAGGTGGACATTGAA...AAACTGAAGCAAGAAGGTTGCATTCTCCACCAAGGGAGTTAACCTACCTGAACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CAA 90 bp ATTAGGAAGAGACGTTCATGTTCTCTGTACAATACATCCATTTACAGAATCAGCGGAATCTGGGATCTTTaGGCGGACCGCACATACTCG +
Preference number: 5 (lower is better)
Translates to: IRKRRSCSLYNTSIYRISGIWDL*ADRTYS
Trigger: CGAGTATGTGCGGTCCGCCAAAAGATCCCAGATTCC...GCTGATTCTGTAAATGGATGTATTGTACAGAGAACATGAACGTCTCTTCCTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CAA 90 bp CTGGCATTTCTACTTAGTTCAGGTAGGTTAACTCCCTTGGTGGAGAATGCAACCGAAGAGAACTGCTCTTaGGAATCCATTTCTTCCAGT +
Preference number: 5 (lower is better)
Translates to: LAFLLSSGRLTPLVENATEENCS*ESISSS
Trigger: ACTGGAAGAAATGGATTCCAAAGAGCAGTTCTCTTC...GGTTGCATTCTCCACCAAGGGAGTTAACCTACCTGAACTAAGTAGAAATGCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CAA 90 bp CATGGCTTTGTTTCTTCCCAAACCTGCCTGATGTCAAAAGTACGTCAAAAGGAGAAAAAGCTTCTTCCCTaGGCCTGTAACATTGCTCTG +
Preference number: 5 (lower is better)
Translates to: HGFVSSQTCLMSKVRQKEKKLLP*ACNIAL
Trigger: CAGAGCAATGTTACAGGCCAAGGGAAGAAGCTTTTT...CTCCTTTTGACGTACTTTTGACATCAGGCAGGTTTGGGAAGAAACAAAGCCATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CAA 90 bp ATTAGGAAGAGACGTTCATGTTCTCTGTACAATACATCCATTTACAGAATCAGCCTTCCAGCAAGGCCTTaGGGAAAGGTGGGAGAGCTA +
Preference number: 5 (lower is better)
Translates to: IRKRRSCSLYNTSIYRISLPARP*GKVGEL
Trigger: TAGCTCTCCCACCTTTCCCAAAGGCCTTGCTGGAAG...GCTGATTCTGTAAATGGATGTATTGTACAGAGAACATGAACGTCTCTTCCTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CAA 90 bp GCAAGAACCCTCAACTCTGTAATAAGTCGAAATACAAGATATAAGGCAGGAAACGCACCAAAGTTTGCTTaGTGGCTCAGCTGCACCACA +
Preference number: 5 (lower is better)
Translates to: ARTLNSVISRNTRYKAGNAPKFA*WLSCTT
Trigger: TGTGGTGCAGCTGAGCCACAAAGCAAACTTTGGTGC...GTTTCCTGCCTTATATCTTGTATTTCGACTTATTACAGAGTTGAGGGTTCTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CAA 90 bp AGTTCAGGTAGGTTAACTCCCTTGGTGGAGAATGCAACCTTCTTGCTTCAGTTTGAGAATGCAACCTTCTaGCTTCAGTTTCAAGTCCCT +
Preference number: 5 (lower is better)
Translates to: SSGRLTPLVENATFLLQFENATF*LQFQVP
Trigger: AGGGACTTGAAACTGAAGCAAGAAGGTTGCATTCTC...AAACTGAAGCAAGAAGGTTGCATTCTCCACCAAGGGAGTTAACCTACCTGAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CAA 90 bp GCAAGAACCCTCAACTCTGTAATAAGTCGAAATACAAGATATAAGGCAGGAAACAAAAGCAAGATGCGTTaGCTCGGTGGCATGTGGGCA +
Preference number: 5 (lower is better)
Translates to: ARTLNSVISRNTRYKAGNKSKMR*LGGMWA
Trigger: TGCCCACATGCCACCGAGCAAACGCATCTTGCTTTT...GTTTCCTGCCTTATATCTTGTATTTCGACTTATTACAGAGTTGAGGGTTCTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CAA 90 bp TTTGTTTCTTCCCAAACCTGCCTGATGTCAAAAGTACGTCAAAAGGAGCCTCACAAACAGACGCTTAAGTaGACAACTTGGACTTGGCCA +
Preference number: 5 (lower is better)
Translates to: FVSSQTCLMSKVRQKEPHKQTLK*TTWTWP
Trigger: TGGCCAAGTCCAAGTTGTCAACTTAAGCGTCTGTTT...GTGAGGCTCCTTTTGACGTACTTTTGACATCAGGCAGGTTTGGGAAGAAACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CAA 90 bp TGTAATCCATCCCAGTGCTTTGTGAAGCTGTGGTGGGAAGATCACTTGAGGCCATCCAACATACATTCTTaGCAAAGTGGATTCAGTTCT +
Preference number: 5 (lower is better)
Translates to: CNPSQCFVKLWWEDHLRPSNIHS*QSGFSS
Trigger: AGAACTGAATCCACTTTGCAAAGAATGTATGTTGGA...TGGCCTCAAGTGATCTTCCCACCACAGCTTCACAAAGCACTGGGATGGATTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649901.1
CDS CCA 90 bp ATCCATTTCTTCCAGTTTCCTAGAGGATGTAATGGGATTTGTCACTaGATGGAGGGAGTCAAAACTTGGGACTGCCTTGCAATTCTTTTG +
Preference number: 5 (lower is better)
Translates to: IHFFQFPRGCNGICH*MEGVKTWDCLAILL
Trigger: CAAAAGAATTGCAAGGCAGTCCCAAGTTTTGACTCCCTCCATCCAGTGACAAATCCCATTACATCCTCTAGGAAACTGGAAGAAATGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
ENST00000647223.1
CDS CCA 90 bp CTGATGAGCTGGAAAAGCAGCAAGACAGCAAACCTAGTTCTCACATaGGCAAAGGTTTACTCTAATTCTCAGAAGCAAAAGCTTGTCTTC +
Preference number: 5 (lower is better)
Translates to: LMSWKSSKTANLVLT*AKVYSNSQKQKLVF
Trigger: GAAGACAAGCTTTTGCTTCTGAGAATTAGAGTAAACCTTTGCCCATGTGAGAACTAGGTTTGCTGTCTTGCTGCTTTTCCAGCTCATCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647223.1
CDS-3UTR CAA 90 bp GACCACTCCCAAGCTTACAGCAGGTTCATACAATGGTGTTTATTCAAAGATATACCTGCAGAATCTGTTTaGGTGTCATTGGAGCATCCG +
Preference number: 5 (lower is better)
Translates to: DHSQAYSRFIQWCLFKDIPAESV*VSLEHP
Trigger: CGGATGCTCCAATGACACCAAAACAGATTCTGCAGG...TATATCTTTGAATAAACACCATTGTATGAACCTGCTGTAAGCTTGGGAGTGGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375689.5
ENST00000542461.5
ENST00000646367.1
CDS-3UTR CAA 90 bp ATTAGGAAGAGACGTTCATGTTCTCTGTACAATACATCCATTTACAGAATCAGCGGACAGTGGGGCAGATaGGTTCCAATTGGGTTTCTC +
Preference number: 5 (lower is better)
Translates to: IRKRRSCSLYNTSIYRISGQWGR*VPIGFL
Trigger: GAGAAACCCAATTGGAACCAATCTGCCCCACTGTCC...GCTGATTCTGTAAATGGATGTATTGTACAGAGAACATGAACGTCTCTTCCTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CAA 90 bp AACTCTGTAATAAGTCGAAATACAAGATATAAGGCAGGAAACAAGGCAAGGGAAACATGGAGTTTGTGCTaGGTCCCAACTTCCCACTGG +
Preference number: 5 (lower is better)
Translates to: NSVISRNTRYKAGNKARETWSLC*VPTSHW
Trigger: CCAGTGGGAAGTTGGGACCAAGCACAAACTCCATGT...TTCCCTTGCCTTGTTTCCTGCCTTATATCTTGTATTTCGACTTATTACAGAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CAA 90 bp AATCACCACATCATTCCCAACTTGTCACTCATGCTTCAGATGACGAAAATGCCAAAAGTCTTCTCATTCTaGACGCTGCCAACAAAGGCA +
Preference number: 5 (lower is better)
Translates to: NHHIIPNLSLMLQMTKMPKVFSF*TLPTKA
Trigger: TGCCTTTGTTGGCAGCGTCAAGAATGAGAAGACTTT...TGGCATTTTCGTCATCTGAAGCATGAGTGACAAGTTGGGAATGATGTGGTGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CAA 90 bp GCAAGAACCCTCAACTCTGTAATAAGTCGAAATACAAGATATAAGGCAGGAAACACTGGTGGTGGTGATTaGTCACATATGGCAGCAAGC +
Preference number: 5 (lower is better)
Translates to: ARTLNSVISRNTRYKAGNTGGGD*SHMAAS
Trigger: GCTTGCTGCCATATGTGACAAATCACCACCACCAGT...GTTTCCTGCCTTATATCTTGTATTTCGACTTATTACAGAGTTGAGGGTTCTTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS GCA 90 bp TTGGGCTGTTTCACTACCTCATCATTCGATGGGATGGGTATCCAATaGAAAGAACTGTTAGAAACGAGAGCCTTGGTTTTCAAGTTTTCT +
Preference number: 5 (lower is better)
Translates to: LGCFTTSSFDGMGIQ*KELLETRALVFKFS
Trigger: AGAAAACTTGAAAACCAAGGCTCTCGTTTCTAACAGTTCTTTGCATTGGATACCCATCCCATCGAATGATGAGGTAGTGAAACAGCCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
ENST00000647223.1
CDS-3UTR CAA 90 bp AATCACCACATCATTCCCAACTTGTCACTCATGCTTCAGATGACGAAAATGCCATCTGTTTTGGTGTCATaGGAGCATCCGAGTAGTTTT +
Preference number: 5 (lower is better)
Translates to: NHHIIPNLSLMLQMTKMPSVLVS*EHPSSF
Trigger: AAAACTACTCGGATGCTCCAATGACACCAAAACAGA...TGGCATTTTCGTCATCTGAAGCATGAGTGACAAGTTGGGAATGATGTGGTGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CAA 90 bp AGACTAACAGACCACTCCCAAGCTTACAGCAGGTTCATACAATGGTGTTTATTCTCTGTTTTGGTGTCATaGGAGCATCCGAGTAGTTTT +
Preference number: 5 (lower is better)
Translates to: RLTDHSQAYSRFIQWCLFSVLVS*EHPSSF
Trigger: AAAACTACTCGGATGCTCCAATGACACCAAAACAGA...GAATAAACACCATTGTATGAACCTGCTGTAAGCTTGGGAGTGGTCTGTTAGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375689.5
ENST00000542461.5
ENST00000646367.1
CDS-3UTR CAA 90 bp AACTCTGTAATAAGTCGAAATACAAGATATAAGGCAGGAAACAAGGCAAGGGAAACACACAAGCCACTTTaGATTTCAGCCTCCTCCTGG +
Preference number: 5 (lower is better)
Translates to: NSVISRNTRYKAGNKARETHKPL*ISASSW
Trigger: CCAGGAGGAGGCTGAAATCAAAAGTGGCTTGTGTGT...TTCCCTTGCCTTGTTTCCTGCCTTATATCTTGTATTTCGACTTATTACAGAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CAA 90 bp AGTTCAGGTAGGTTAACTCCCTTGGTGGAGAATGCAACCTTCTTGCTTCAGTTTTGTGAACACTTTCAATaGTGTTACGAAAGGACTGAC +
Preference number: 5 (lower is better)
Translates to: SSGRLTPLVENATFLLQFCEHFQ*CYERTD
Trigger: GTCAGTCCTTTCGTAACACAATTGAAAGTGTTCACA...AAACTGAAGCAAGAAGGTTGCATTCTCCACCAAGGGAGTTAACCTACCTGAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CAA 90 bp CATGGCTTTGTTTCTTCCCAAACCTGCCTGATGTCAAAAGTACGTCAAAAGGAGTGTGAACACTTTCAATaGTGTTACGAAAGGACTGAC +
Preference number: 5 (lower is better)
Translates to: HGFVSSQTCLMSKVRQKECEHFQ*CYERTD
Trigger: GTCAGTCCTTTCGTAACACAATTGAAAGTGTTCACA...CTCCTTTTGACGTACTTTTGACATCAGGCAGGTTTGGGAAGAAACAAAGCCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CAA 90 bp CTGGCATTTCTACTTAGTTCAGGTAGGTTAACTCCCTTGGTGGAGAATGCAACCTTAGAAACGAGAGCCTaGGTTTTCAAGTTTTCTTGT +
Preference number: 5 (lower is better)
Translates to: LAFLLSSGRLTPLVENATLETRA*VFKFSC
Trigger: ACAAGAAAACTTGAAAACCAAGGCTCTCGTTTCTAA...GGTTGCATTCTCCACCAAGGGAGTTAACCTACCTGAACTAAGTAGAAATGCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CAA 90 bp CTAACAGACCACTCCCAAGCTTACAGCAGGTTCATACAATGGTGTTTATTCAAATCTGTTTTGGTGTCATaGGAGCATCCGAGTAGTTTT +
Preference number: 5 (lower is better)
Translates to: LTDHSQAYSRFIQWCLFKSVLVS*EHPSSF
Trigger: AAAACTACTCGGATGCTCCAATGACACCAAAACAGA...TTTGAATAAACACCATTGTATGAACCTGCTGTAAGCTTGGGAGTGGTCTGTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375689.5
ENST00000542461.5
ENST00000646367.1
CDS-3UTR CAA 90 bp CAAACCATTAATCCATTAAAAGAGCACAACGAATATCAGAGAAGTGATGCCTATCCTGCAGAATCTGTTTaGGTGTCATTGGAGCATCCG +
Preference number: 5 (lower is better)
Translates to: QTINPLKEHNEYQRSDAYPAESV*VSLEHP
Trigger: CGGATGCTCCAATGACACCAAAACAGATTCTGCAGG...ATAGGCATCACTTCTCTGATATTCGTTGTGCTCTTTTAATGGATTAATGGTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375689.5
ENST00000542461.5
ENST00000646367.1
CDS-3UTR CAA 90 bp AGTTCAGGTAGGTTAACTCCCTTGGTGGAGAATGCAACCTTCTTGCTTCAGTTTGGTTTTCAAGTTTTCTaGTCTAGTATCACTTTCCCT +
Preference number: 5 (lower is better)
Translates to: SSGRLTPLVENATFLLQFGFQVF*SSITFP
Trigger: AGGGAAAGTGATACTAGACAAGAAAACTTGAAAACC...AAACTGAAGCAAGAAGGTTGCATTCTCCACCAAGGGAGTTAACCTACCTGAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS TCA 90 bp TCAGGCCTATATTTGTTTCCAGGTGCAGAACCGTTAGAGAAATCCTaGAATTTCTACAAGATCCTGAAAACTAGCCCAAGCTTCCAATTT +
Preference number: 5 (lower is better)
Translates to: SGLYLFPGAEPLEKS*NFYKILKTSPSFQF
Trigger: AAATTGGAAGCTTGGGCTAGTTTTCAGGATCTTGTAGAAATTTCAGGATTTCTCTAACGGTTCTGCACCTGGAAACAAATATAGGCCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555343.2
ENST00000645688.1
CDS CCA 90 bp ACATGTAGACTCAGAATTAAACTCTACCCATTCCCAAGAAGAACTTaGGAGTTATCTCACACCTCAAAACTACAAAGAGTGTGGATGAGA +
Preference number: 5 (lower is better)
Translates to: TCRLRIKLYPFPRRT*ELSHTSKLQRVWMR
Trigger: TCTCATCCACACTCTTTGTAGTTTTGAGGTGTGAGATAACTCCCAAGTTCTTCTTGGGAATGGGTAGAGTTTAATTCTGAGTCTACATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644060.1
CDS-3UTR CAA 90 bp GACCACTCCCAAGCTTACAGCAGGTTCATACAATGGTGTTTATTCAAAGATATATCTCCTCCTCTTGAATaGGAATGTAGCATAGCATTG +
Preference number: 5 (lower is better)
Translates to: DHSQAYSRFIQWCLFKDISPPLE*ECSIAL
Trigger: CAATGCTATGCTACATTCCAATTCAAGAGGAGGAGA...TATATCTTTGAATAAACACCATTGTATGAACCTGCTGTAAGCTTGGGAGTGGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375689.5
ENST00000542461.5
ENST00000646367.1
CDS-3UTR CAA 90 bp GCAAGAACCCTCAACTCTGTAATAAGTCGAAATACAAGATATAAGGCAGGAAACTCTCCTCCTCTTGAATaGGAATGTAGCATAGCATTG +
Preference number: 5 (lower is better)
Translates to: ARTLNSVISRNTRYKAGNSPPLE*ECSIAL
Trigger: CAATGCTATGCTACATTCCAATTCAAGAGGAGGAGA...GTTTCCTGCCTTATATCTTGTATTTCGACTTATTACAGAGTTGAGGGTTCTTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CAA 90 bp GCAAGAACCCTCAACTCTGTAATAAGTCGAAATACAAGATATAAGGCAGGAAACGTCTTTTTCTTTTGTTaGTTCGCCTGTGAGGAAGCT +
Preference number: 5 (lower is better)
Translates to: ARTLNSVISRNTRYKAGNVFFFC*FACEEA
Trigger: AGCTTCCTCACAGGCGAACAAACAAAAGAAAAAGAC...GTTTCCTGCCTTATATCTTGTATTTCGACTTATTACAGAGTTGAGGGTTCTTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CAA 90 bp GCAAGAACCCTCAACTCTGTAATAAGTCGAAATACAAGATATAAGGCAGGAAACCTGTCGTATCCTGACTaGCATCTCATGAGTAAATTC +
Preference number: 5 (lower is better)
Translates to: ARTLNSVISRNTRYKAGNLSYPD*HLMSKF
Trigger: GAATTTACTCATGAGATGCAAGTCAGGATACGACAG...GTTTCCTGCCTTATATCTTGTATTTCGACTTATTACAGAGTTGAGGGTTCTTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CAA 90 bp AACTCTGTAATAAGTCGAAATACAAGATATAAGGCAGGAAACAAGGCAAGGGAAAAACAGACGCTTAAGTaGACAACTTGGACTTGGCCA +
Preference number: 5 (lower is better)
Translates to: NSVISRNTRYKAGNKAREKQTLK*TTWTWP
Trigger: TGGCCAAGTCCAAGTTGTCAACTTAAGCGTCTGTTT...TTCCCTTGCCTTGTTTCCTGCCTTATATCTTGTATTTCGACTTATTACAGAGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CAA 90 bp CACAACGAATATCAGAGAAGTGATGCCTATGGATGTAAAAGGCCAATGAACAAGCCCAACAGAGATACTTaGTCTTTGTCCAACATACAT +
Preference number: 5 (lower is better)
Translates to: HNEYQRSDAYGCKRPMNKPNRDT*SLSNIH
Trigger: ATGTATGTTGGACAAAGACAAAGTATCTCTGTTGGG...CTTGTTCATTGGCCTTTTACATCCATAGGCATCACTTCTCTGATATTCGTTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375689.5
CDS GCA 90 bp CCAGTTTTAAAACAACACGTCTCTTCTAAAGGCTCTCTCACATCATaGTCTTATAGGGACAGAGCTAACACATCTACTATAAGGGAAATT +
Preference number: 5 (lower is better)
Translates to: PVLKQHVSSKGSLTS*SYRDRANTSTIREI
Trigger: AATTTCCCTTATAGTAGATGTGTTAGCTCTGTCCCTATAAGAGCATGATGTGAGAGAGCCTTTAGAAGAGACGTGTTGTTTTAAAACTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644168.1
CDS-3UTR CAA 90 bp ATTAGGAAGAGACGTTCATGTTCTCTGTACAATACATCCATTTACAGAATCAGCTCTCCTCCTCTTGAATaGGAATGTAGCATAGCATTG +
Preference number: 5 (lower is better)
Translates to: IRKRRSCSLYNTSIYRISSPPLE*ECSIAL
Trigger: CAATGCTATGCTACATTCCAATTCAAGAGGAGGAGA...GCTGATTCTGTAAATGGATGTATTGTACAGAGAACATGAACGTCTCTTCCTAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CAA 90 bp GCAAGAACCCTCAACTCTGTAATAAGTCGAAATACAAGATATAAGGCAGGAAACTGTGAACACTTTCAATaGTGTTACGAAAGGACTGAC +
Preference number: 5 (lower is better)
Translates to: ARTLNSVISRNTRYKAGNCEHFQ*CYERTD
Trigger: GTCAGTCCTTTCGTAACACAATTGAAAGTGTTCACA...GTTTCCTGCCTTATATCTTGTATTTCGACTTATTACAGAGTTGAGGGTTCTTGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CAA 90 bp CTAACAGACCACTCCCAAGCTTACAGCAGGTTCATACAATGGTGTTTATTCAAATCCAACATACATTCTTaGCAAAGTGGATTCAGTTCT +
Preference number: 5 (lower is better)
Translates to: LTDHSQAYSRFIQWCLFKSNIHS*QSGFSS
Trigger: AGAACTGAATCCACTTTGCAAAGAATGTATGTTGGA...TTTGAATAAACACCATTGTATGAACCTGCTGTAAGCTTGGGAGTGGTCTGTTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375689.5
CDS-3UTR CAA 90 bp ATTAGGAAGAGACGTTCATGTTCTCTGTACAATACATCCATTTACAGAATCAGCTGTGAACACTTTCAATaGTGTTACGAAAGGACTGAC +
Preference number: 5 (lower is better)
Translates to: IRKRRSCSLYNTSIYRISCEHFQ*CYERTD
Trigger: GTCAGTCCTTTCGTAACACAATTGAAAGTGTTCACA...GCTGATTCTGTAAATGGATGTATTGTACAGAGAACATGAACGTCTCTTCCTAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CAA 90 bp ATTAGGAAGAGACGTTCATGTTCTCTGTACAATACATCCATTTACAGAATCAGCGGTTTTCAAGTTTTCTaGTCTAGTATCACTTTCCCT +
Preference number: 5 (lower is better)
Translates to: IRKRRSCSLYNTSIYRISGFQVF*SSITFP
Trigger: AGGGAAAGTGATACTAGACAAGAAAACTTGAAAACC...GCTGATTCTGTAAATGGATGTATTGTACAGAGAACATGAACGTCTCTTCCTAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CAA 90 bp AACTCTGTAATAAGTCGAAATACAAGATATAAGGCAGGAAACAAGGCAAGGGAATTAGAAACGAGAGCCTaGGTTTTCAAGTTTTCTTGT +
Preference number: 5 (lower is better)
Translates to: NSVISRNTRYKAGNKARELETRA*VFKFSC
Trigger: ACAAGAAAACTTGAAAACCAAGGCTCTCGTTTCTAA...TTCCCTTGCCTTGTTTCCTGCCTTATATCTTGTATTTCGACTTATTACAGAGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS GCA 72 bp CGCGCTGCGTCAGTCGCCCACGGCGGCAGCGGCGGCTaGCCCGCGATCGCTAAGGAATGCGGCGGCTCCGCA +
Preference number: 6 (lower is better)
Translates to: RAASVAHGGSGG*PAIAKECGGSA
Trigger: TGCGGAGCCGCCGCATTCCTTAGCGATCGCGGGGCAGCCGCCGCTGCCGCCGTGGGCGACTGACGCAGCGCG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000375687.10
ENST00000542461.5
ENST00000613218.4
ENST00000620121.4
ENST00000644587.1
ENST00000646367.1
ENST00000651418.1
CDS TCA 72 bp GAGGTCACGGCTCCGGCCTCCGCTTTCCCGCTCTGCTaGGGGACTGAGACAGGACCGACGGCGGGGCGGGAG +
Preference number: 6 (lower is better)
Translates to: EVTAPASAFPLC*GTETGPTAGRE
Trigger: CTCCCGCCCCGCCGTCGGTCCTGTCTCAGTCCCTCAGCAGAGCGGGAAAGCGGAGGCCGGAGCCGTGACCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000375687.10
ENST00000542461.5
ENST00000613218.4
ENST00000644587.1
ENST00000646367.1
ENST00000651418.1
CDS CCA 72 bp GGCTTCCGGAAGCCTCTCAGGAGCGGGGCAGGGTCCTaGGTGACCTCGGCCTGGCCACGAATAGCAGCGCTG +
Preference number: 6 (lower is better)
Translates to: GFRKPLRSGAGS*VTSAWPRIAAL
Trigger: CAGCGCTGCTATTCGTGGCCAGGCCGAGGTCACCCAGGACCCTGCCCCGCTCCTGAGAGGCTTCCGGAAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000555564.2
ENST00000613218.4
ENST00000619344.4
ENST00000620121.4
ENST00000647223.1
ENST00000651418.1
CDS TCA 72 bp CCGATGGCAGTGGTGGCCGCCTCTCTATGGCAGTGGTaGCCTCTCGCCCCTCGGACCTGCAGAGCACGGGCT +
Preference number: 6 (lower is better)
Translates to: PMAVVAASLWQW*PLAPRTCRARA
Trigger: AGCCCGTGCTCTGCAGGTCCGAGGGGCGAGAGGTCACCACTGCCATAGAGAGGCGGCCACCACTGCCATCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
ENST00000647223.1
CDS CCA 72 bp CTGCTGCTGGACGGGCTGCCGCTCTCGCCATCGGCGTaGCAGCCCGAGAACCCTGATGCAGATTCCACGTGG +
Preference number: 6 (lower is better)
Translates to: LLLDGLPLSPSA*QPENPDADSTW
Trigger: CCACGTGGAATCTGCATCAGGGTTCTCGGGCTGCCACGCCGATGGCGAGAGCGGCAGCCCGTCCAGCAGCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000651418.1
CDS CCA 72 bp GGATCTCAGCAGGAAGAGGCATCGGGTCCGCAGGCCTaGGGCGCTGAAGGGTTGCAGCCACATTCCCAGAGC +
Preference number: 6 (lower is better)
Translates to: GSQQEEASGPQA*GAEGLQPHSQS
Trigger: GCTCTGGGAATGTGGCTGCAACCCTTCAGCGCCCCAGGCCTGCGGACCCGATGCCTCTTCCTGCTGAGATCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
ENST00000647223.1
CDS CCA 72 bp GGCAGAGAAATAAGTGCCACGCCACTCACCTGTGGCTaGCTTCCGGAAGCCTCTCAGGAGCGGGGCAGGGTC +
Preference number: 6 (lower is better)
Translates to: GREISATPLTCG*LPEASQERGRV
Trigger: GACCCTGCCCCGCTCCTGAGAGGCTTCCGGAAGCCAGCCACAGGTGAGTGGCGTGGCACTTATTTCTCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647223.1
CDS CAA 90 bp CAGCAGGAAGAGGCATCGGGTCCGCAGGCCTGGGGCGCTGAAGGGTaGCAGCCACATTCCCAGAGCCAAAAAGCTTCTTCCCTTGGCCTG +
Preference number: 6 (lower is better)
Translates to: QQEEASGPQAWGAEG*QPHSQSQKASSLGL
Trigger: CAGGCCAAGGGAAGAAGCTTTTTGGCTCTGGGAATGTGGCTGCAACCCTTCAGCGCCCCAGGCCTGCGGACCCGATGCCTCTTCCTGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
ENST00000647223.1
CDS GCA 72 bp AGGCATCGGGTCCGCAGGCCTGGGGCGCTGAAGGGTTaGAGCCACATTCCCAGAGCCAAAAAGCTTCTTCCC +
Preference number: 6 (lower is better)
Translates to: RHRVRRPGALKG*SHIPRAKKLLP
Trigger: GGGAAGAAGCTTTTTGGCTCTGGGAATGTGGCTGCAACCCTTCAGCGCCCCAGGCCTGCGGACCCGATGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
ENST00000647223.1
CDS GCA 72 bp GCCTGCAGGGGCCCCCTTTACAGGCAGAGAAATAAGTaGCACGCCACTCACCTGTGGCTGGCTTCCGGAAGC +
Preference number: 6 (lower is better)
Translates to: ACRGPLYRQRNK*HATHLWLASGS
Trigger: GCTTCCGGAAGCCAGCCACAGGTGAGTGGCGTGGCACTTATTTCTCTGCCTGTAAAGGGGGCCCCTGCAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647223.1
CDS TCA 72 bp GCCGCTCTCGCCATCGGCGTGGCAGCCCGAGAACCCTaGAGGCACAGCATTCCACTGGTCAAAAGTATCACC +
Preference number: 6 (lower is better)
Translates to: AALAIGVAAREP*RHSIPLVKSIT
Trigger: GGTGATACTTTTGACCAGTGGAATGCTGTGCCTTCAGGGTTCTCGGGCTGCCACGCCGATGGCGAGAGCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619344.4
ENST00000647223.1
CDS CCA 72 bp GTGTCCTCTGGCTCCTCTCCCTCCACTGTAGCTGGATaGCGAGACCACTGCAGGGCATCCTTCTTGAGCGTG +
Preference number: 6 (lower is better)
Translates to: VSSGSSPSTVAG*RDHCRASFLSV
Trigger: CACGCTCAAGAAGGATGCCCTGCAGTGGTCTCGCCATCCAGCTACAGTGGAGGGAGAGGAGCCAGAGGACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000470145.3
ENST00000613218.4
ENST00000620121.4
ENST00000643168.1
ENST00000645688.1
ENST00000646985.1
ENST00000651418.1
CDS CCA 72 bp AGCCGTGTCCTCTGGCTCCTCTCCCTCCACTGTAGCTaGATGGCGAGACCACTGCAGGGCATCCTTCTTGAG +
Preference number: 6 (lower is better)
Translates to: SRVLWLLSLHCS*MARPLQGILLE
Trigger: CTCAAGAAGGATGCCCTGCAGTGGTCTCGCCATCCAGCTACAGTGGAGGGAGAGGAGCCAGAGGACACGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000470145.3
ENST00000613218.4
ENST00000620121.4
ENST00000643168.1
ENST00000645688.1
ENST00000646985.1
ENST00000651418.1
CDS CCA 72 bp TGGCTCAGCCTGGATCCGAGAAGCCACAGACTCAACTaGGAATTCGGGACCCTCCAGGTCGGGTGCTGCAGA +
Preference number: 6 (lower is better)
Translates to: WLSLDPRSHRLN*EFGTLQVGCCR
Trigger: TCTGCAGCACCCGACCTGGAGGGTCCCGAATTCCCAGTTGAGTCTGTGGCTTCTCGGATCCAGGCTGAGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000644168.1
ENST00000646985.1
ENST00000647223.1
ENST00000651418.1
CDS CCA 72 bp TGGCATGGCTGGTCCCCAGTGGGAGCAACGGGGAGTTaGGAGGCATCTCCTAGCCCATCTGTGAGTCCAACT +
Preference number: 6 (lower is better)
Translates to: WHGWSPVGATGS*EASPSPSVSPT
Trigger: AGTTGGACTCACAGATGGGCTAGGAGATGCCTCCCAACTCCCCGTTGCTCCCACTGGGGACCAGCCATGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
ENST00000647223.1
CDS CCA 72 bp AGCCCAGCACTAGAACCTATGGCAGGCCTCATCCATTaGCAGGGCTCTTGCCTGTGGCCCGACAGCTCTCCT +
Preference number: 6 (lower is better)
Translates to: SPALEPMAGLIH*QGSCLWPDSSP
Trigger: AGGAGAGCTGTCGGGCCACAGGCAAGAGCCCTGCCAATGGATGAGGCCTGCCATAGGTTCTAGTGCTGGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470145.3
ENST00000647223.1
CDS CCA 72 bp GTGTCCTCTGGCTCCTCTCCCTCCACTGTAGCTGGATaGCGAGACCACTGCAGGGCATCCTTCTGTGACAGC +
Preference number: 6 (lower is better)
Translates to: VSSGSSPSTVAG*RDHCRASFCDS
Trigger: GCTGTCACAGAAGGATGCCCTGCAGTGGTCTCGCCATCCAGCTACAGTGGAGGGAGAGGAGCCAGAGGACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644060.1
CDS CCA 72 bp TACAGGCAGAGAAATAAGTGCCACGCCACTCACCTGTaGCTGGCTTCCGGAAGCCTCTCAGGAGCGGGGCAG +
Preference number: 6 (lower is better)
Translates to: YRQRNKCHATHL*LASGSLSGAGQ
Trigger: CTGCCCCGCTCCTGAGAGGCTTCCGGAAGCCAGCCACAGGTGAGTGGCGTGGCACTTATTTCTCTGCCTGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647223.1
CDS CAA 72 bp CCACTGAGGACCCAGGCATGGACAGGCACACGGCTCTaGGCTGGTACTCAGTACTGGCCAGCAGTAGGGAAT +
Preference number: 6 (lower is better)
Translates to: PLRTQAWTGTRL*AGTQYWPAVGN
Trigger: ATTCCCTACTGCTGGCCAGTACTGAGTACCAGCCAAGAGCCGTGTGCCTGTCCATGCCTGGGTCCTCAGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
ENST00000647223.1
CDS CAA 90 bp GGCAGGCTAGGAATTCTGTCTGGAGATGCAGAGGCACGTGCCAAGTaGTCTGGCTCAGCCTGGATCCGAGAAGCCACAGACTCAACTGGG +
Preference number: 6 (lower is better)
Translates to: GRLGILSGDAEARAK*SGSAWIREATDSTG
Trigger: CCCAGTTGAGTCTGTGGCTTCTCGGATCCAGGCTGAGCCAGACAACTTGGCACGTGCCTCTGCATCTCCAGACAGAATTCCTAGCCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000644168.1
ENST00000646985.1
ENST00000647223.1
ENST00000651418.1
CDS TCA 72 bp GTGAAAGCGCAGATTCCCAGGCTCTATCCCAGACCCTaGGGCTCAGCAGGTCTTACGAAGGGCCCTAGGAGT +
Preference number: 6 (lower is better)
Translates to: VKAQIPRLYPRP*GSAGLTKGPRS
Trigger: ACTCCTAGGGCCCTTCGTAAGACCTGCTGAGCCTCAGGGTCTGGGATAGAGCCTGGGAATCTGCGCTTTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643168.1
ENST00000649901.1
CDS GCA 72 bp CTGGTTCGGAGATCTGGCCGAGAGCGTTTCTTAAAATaGCCATCTCGCTGTCGGGTGGCTGGACCACGCTGT +
Preference number: 6 (lower is better)
Translates to: LVRRSGRERFLK*PSRCRVAGPRC
Trigger: ACAGCGTGGTCCAGCCACCCGACAGCGAGATGGGCATTTTAAGAAACGCTCTCGGCCAGATCTCCGAACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000644168.1
ENST00000646985.1
ENST00000647223.1
ENST00000651418.1
CDS GCA 72 bp GAACCTATGGCAGGCCTCATCCATTGGCAGGGCTCTTaGCTGTGGCCCGACAGCTCTCCTAGTATCGCACTA +
Preference number: 6 (lower is better)
Translates to: EPMAGLIHWQGS*LWPDSSPSIAL
Trigger: TAGTGCGATACTAGGAGAGCTGTCGGGCCACAGGCAAGAGCCCTGCCAATGGATGAGGCCTGCCATAGGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470145.3
ENST00000647223.1
CDS GCA 72 bp CAGGCTAGGAATTCTGTCTGGAGATGCAGAGGCACGTaGCAAGTTGTCTGGCTCAGCCTGGATCCGAGAAGC +
Preference number: 6 (lower is better)
Translates to: QARNSVWRCRGT*QVVWLSLDPRS
Trigger: GCTTCTCGGATCCAGGCTGAGCCAGACAACTTGGCACGTGCCTCTGCATCTCCAGACAGAATTCCTAGCCTG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000644168.1
ENST00000646985.1
ENST00000647223.1
ENST00000651418.1
CDS GCA 72 bp GCTGGTGGAAGAACCTTCTCTAGGGGCAAGCTACCCTaGAGCAACTGCATCACAAGTGGGTTAGTGGCCTCC +
Preference number: 6 (lower is better)
Translates to: AGGRTFSRGKLP*SNCITSGLVAS
Trigger: GGAGGCCACTAACCCACTTGTGATGCAGTTGCTGCAGGGTAGCTTGCCCCTAGAGAAGGTTCTTCCACCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
ENST00000647223.1
CDS GCA 72 bp TCCTCTCCCTCCACTGTAGCTGGATGGCGAGACCACTaGAGGGCATCCTTCTGTGACAGCAAGGTACAACTC +
Preference number: 6 (lower is better)
Translates to: SSPSTVAGWRDH*RASFCDSKVQL
Trigger: GAGTTGTACCTTGCTGTCACAGAAGGATGCCCTGCAGTGGTCTCGCCATCCAGCTACAGTGGAGGGAGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644060.1
CDS CCA 72 bp GATGCAGAGGCACGTGCCAAGTTGTCTGGCTCAGCCTaGATCCGAGAAGCCACAGACTCAACTGGGAATTCG +
Preference number: 6 (lower is better)
Translates to: DAEARAKLSGSA*IREATDSTGNS
Trigger: CGAATTCCCAGTTGAGTCTGTGGCTTCTCGGATCCAGGCTGAGCCAGACAACTTGGCACGTGCCTCTGCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000644168.1
ENST00000646985.1
ENST00000647223.1
ENST00000651418.1
CDS CCA 72 bp TCTGTCTGGAGATGCAGAGGCACGTGCCAAGTTGTCTaGCTCAGCCTGGATCCGAGAAGCCACAGACTCAAC +
Preference number: 6 (lower is better)
Translates to: SVWRCRGTCQVV*LSLDPRSHRLN
Trigger: GTTGAGTCTGTGGCTTCTCGGATCCAGGCTGAGCCAGACAACTTGGCACGTGCCTCTGCATCTCCAGACAGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000644168.1
ENST00000646985.1
ENST00000647223.1
ENST00000651418.1
CDS CCA 72 bp TGGACAGGCACACGGCTCTTGGCTGGTACTCAGTACTaGCCAGCAGTAGGGAATCTGGGATCTTTTGGCGGA +
Preference number: 6 (lower is better)
Translates to: WTGTRLLAGTQY*PAVGNLGSFGG
Trigger: TCCGCCAAAAGATCCCAGATTCCCTACTGCTGGCCAGTACTGAGTACCAGCCAAGAGCCGTGTGCCTGTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
ENST00000647223.1
CDS CCA 72 bp GTTTGTGCTTGGTCCCAACTTCCCACTGGGAAAAACTaGAGGGATCTCAGCAGGAAGAGGCATCGGGTCCGC +
Preference number: 6 (lower is better)
Translates to: VCAWSQLPTGKN*RDLSRKRHRVR
Trigger: GCGGACCCGATGCCTCTTCCTGCTGAGATCCCTCCAGTTTTTCCCAGTGGGAAGTTGGGACCAAGCACAAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
ENST00000647223.1
CDS CAA 72 bp CGGAATGGGACCATTGTCTGCAGGAACGGTGGGTCCTaGCTCCTCATCATCACTTTCCCAGGAAGTGGTGCC +
Preference number: 6 (lower is better)
Translates to: RNGTIVCRNGGS*LLIITFPGSGA
Trigger: GGCACCACTTCCTGGGAAAGTGATGATGAGGAGCAAGGACCCACCGTTCCTGCAGACAATGGTCCCATTCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
ENST00000647223.1
CDS CAA 72 bp GGAATCAAACAGTCTCCTACCCGGATGGGCGGGACTTaGGGCTCCTCTTTAGTGGGCTGTGGCTTTTCGGTG +
Preference number: 6 (lower is better)
Translates to: GIKQSPTRMGGT*GSSLVGCGFSV
Trigger: CACCGAAAAGCCACAGCCCACTAAAGAGGAGCCCAAAGTCCCGCCCATCCGGGTAGGAGACTGTTTGATTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647223.1
CDS CAA 90 bp CTGAAGGGTTGCAGCCACATTCCCAGAGCCAAAAAGCTTCTTCCCTaGGCCTGTAACATTGCTCTGATCACCCAGGGCCCGACCTGTCTG +
Preference number: 6 (lower is better)
Translates to: LKGCSHIPRAKKLLP*ACNIALITQGPTCL
Trigger: CAGACAGGTCGGGCCCTGGGTGATCAGAGCAATGTTACAGGCCAAGGGAAGAAGCTTTTTGGCTCTGGGAATGTGGCTGCAACCCTTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
ENST00000647223.1
CDS TCA 72 bp GGGCTGACCTTTAACCACCCAGGGTGGTTTGATACGTaGAAGTTGAATCCGGATGGGCGGGACTTTGGGCTC +
Preference number: 6 (lower is better)
Translates to: GLTFNHPGWFDT*KLNPDGRDFGL
Trigger: GAGCCCAAAGTCCCGCCCATCCGGATTCAACTTTCACGTATCAAACCACCCTGGGTGGTTAAAGGTCAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000644168.1
ENST00000646985.1
ENST00000651418.1
CDS TCA 72 bp CCAAAAAGCTTCTTCCCTTGGCCTGTAACATTGCTCTaGTCACCCAGGGCCCGACCTGTCTGCTCTGGACCA +
Preference number: 6 (lower is better)
Translates to: PKSFFPWPVTLL*SPRARPVCSGP
Trigger: TGGTCCAGAGCAGACAGGTCGGGCCCTGGGTGATCAGAGCAATGTTACAGGCCAAGGGAAGAAGCTTTTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
ENST00000647223.1
CDS TCA 72 bp AAGGGCAAGTCCATGACAAAGGGCATCCCTTCCAAGTaGCCCACCAGTTCCAGGGGACTATGCCCAGTAGCT +
Preference number: 6 (lower is better)
Translates to: KGKSMTKGIPSK*PTSSRGLCPVA
Trigger: AGCTACTGGGCATAGTCCCCTGGAACTGGTGGGTCACTTGGAAGGGATGCCCTTTGTCATGGACTTGCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
ENST00000647223.1
CDS GCA 72 bp TCCTCTCCCTCCACTGTAGCTGGATGGCGAGACCACTaGAGGGCATCCTTCTTGAGCGTGAAAAGGCTGATT +
Preference number: 6 (lower is better)
Translates to: SSPSTVAGWRDH*RASFLSVKRLI
Trigger: AATCAGCCTTTTCACGCTCAAGAAGGATGCCCTGCAGTGGTCTCGCCATCCAGCTACAGTGGAGGGAGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000470145.3
ENST00000613218.4
ENST00000620121.4
ENST00000643168.1
ENST00000645688.1
ENST00000646985.1
ENST00000651418.1
CDS GCA 72 bp AGAACCTTCTCTAGGGGCAAGCTACCCTGCAGCAACTaGATCACAAGTGGGTTAGTGGCCTCCACTGAGGAC +
Preference number: 6 (lower is better)
Translates to: RTFSRGKLPCSN*ITSGLVASTED
Trigger: GTCCTCAGTGGAGGCCACTAACCCACTTGTGATGCAGTTGCTGCAGGGTAGCTTGCCCCTAGAGAAGGTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
ENST00000647223.1
CDS GCA 72 bp TTTCCAGTCCAGCTTCTGAAGGCAAACAGCCCAGTCTaGGTTTCTCAAAGTGGGGTCCGTGAGCCACTGCGT +
Preference number: 6 (lower is better)
Translates to: FPVQLLKANSPV*VSQSGVREPLR
Trigger: ACGCAGTGGCTCACGGACCCCACTTTGAGAAACGCAGACTGGGCTGTTTGCCTTCAGAAGCTGGACTGGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643168.1
ENST00000649901.1
CDS CCA 72 bp AAGAGGAGCTGCTGCTGGAAGTGTGATGGTAAGGCATaGAAGGTCCGAGAGTTGATCAGGGCACGGAGGTTG +
Preference number: 6 (lower is better)
Translates to: KRSCCWKCDGKA*KVRELIRARRL
Trigger: CAACCTCCGTGCCCTGATCAACTCTCGGACCTTCCATGCCTTACCATCACACTTCCAGCAGCAGCTCCTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000553345.5
ENST00000555564.2
ENST00000613218.4
ENST00000619344.4
ENST00000620121.4
ENST00000646985.1
ENST00000647223.1
ENST00000651418.1
CDS CCA 72 bp GGGGTGGGAGCAGCTTTCTCCCACTCCTCTCCAACCTaGGGCTCAACAGATGGTATGTGTTCTCTGGATTCT +
Preference number: 6 (lower is better)
Translates to: GVGAAFSHSSPT*GSTDGMCSLDS
Trigger: AGAATCCAGAGAACACATACCATCTGTTGAGCCCCAGGTTGGAGAGGAGTGGGAGAAAGCTGCTCCCACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
ENST00000647223.1
CDS CCA 72 bp AGGGAGTCAAAACTTGGGACTGCCTTGCAATTCTTTTaGGGTGCTCCAGGAGCCTGGGTGGCCTCAATCCTG +
Preference number: 6 (lower is better)
Translates to: RESKLGTALQFF*GAPGAWVASIL
Trigger: CAGGATTGAGGCCACCCAGGCTCCTGGAGCACCCCAAAAGAATTGCAAGGCAGTCCCAAGTTTTGACTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
ENST00000647223.1
CDS CCA 72 bp CCCAGTCTTCCCTTGGAGTCTGTACCCCACCAGACATaGAGTTTGTGCTTGGTCCCAACTTCCCACTGGGAA +
Preference number: 6 (lower is better)
Translates to: PSLPLESVPHQT*SLCLVPTSHWE
Trigger: TTCCCAGTGGGAAGTTGGGACCAAGCACAAACTCCATGTCTGGTGGGGTACAGACTCCAAGGGAAGACTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
ENST00000647223.1
CDS CCA 72 bp CTCATTCTTGACGCTGCCAACAAAGGCATGTGGCTTTaGAGCCCAGTCTTCCCTTGGAGTCTGTACCCCACC +
Preference number: 6 (lower is better)
Translates to: LILDAANKGMWL*SPVFPWSLYPT
Trigger: GGTGGGGTACAGACTCCAAGGGAAGACTGGGCTCCAAAGCCACATGCCTTTGTTGGCAGCGTCAAGAATGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
ENST00000647223.1
CDS CAA 72 bp TGCAGCCACATTCCCAGAGCCAAAAAGCTTCTTCCCTaGGCCTGTAACATTGCTCTGATCACCCAGGGCCCG +
Preference number: 6 (lower is better)
Translates to: CSHIPRAKKLLP*ACNIALITQGP
Trigger: CGGGCCCTGGGTGATCAGAGCAATGTTACAGGCCAAGGGAAGAAGCTTTTTGGCTCTGGGAATGTGGCTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
ENST00000647223.1
CDS CAA 90 bp GAGCCCAGTCTTCCCTTGGAGTCTGTACCCCACCAGACATGGAGTTaGTGCTTGGTCCCAACTTCCCACTGGGAAAAACTGGAGGGATCT +
Preference number: 6 (lower is better)
Translates to: EPSLPLESVPHQTWS*CLVPTSHWEKLEGS
Trigger: AGATCCCTCCAGTTTTTCCCAGTGGGAAGTTGGGACCAAGCACAAACTCCATGTCTGGTGGGGTACAGACTCCAAGGGAAGACTGGGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
ENST00000647223.1
CDS TCA 72 bp TCTCTAGTGTCAGCCTCACTGCTGTCCTCCGTGAGGTaGCCTTCAAAGTCAGAGGCTGTATCCGTGGACTCA +
Preference number: 6 (lower is better)
Translates to: SLVSASLLSSVR*PSKSEAVSVDS
Trigger: TGAGTCCACGGATACAGCCTCTGACTTTGAAGGTCACCTCACGGAGGACAGCAGTGAGGCTGACACTAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
ENST00000647223.1
CDS TCA 72 bp CTGGCTCTCGGGGTAATTTCCAGAAGGGCAAGTCCATaGCAAAGGGCATCCCTTCCAAGTGACCCACCAGTT +
Preference number: 6 (lower is better)
Translates to: LALGVISRRASP*QRASLPSDPPV
Trigger: AACTGGTGGGTCACTTGGAAGGGATGCCCTTTGTCATGGACTTGCCCTTCTGGAAATTACCCCGAGAGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
ENST00000647223.1
CDS GCA 72 bp ACGATCTTCAAGCCGGGGCTTCTTTTCGGGAAAGGATaGAGAGGCCGCCTGCTCAAAGGATTTCCTCTTCTG +
Preference number: 6 (lower is better)
Translates to: TIFKPGLLFGKG*RGRLLKGFPLL
Trigger: CAGAAGAGGAAATCCTTTGAGCAGGCGGCCTCTGCATCCTTTCCCGAAAAGAAGCCCCGGCTTGAAGATCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000644168.1
ENST00000646985.1
ENST00000647223.1
ENST00000651418.1
CDS GCA 72 bp CTCAGACAAGCTCATTTCTCCCAGCTCTCCCTGAGATaGTGCCAGCAATACTGGGATGCTTCCATCTCCCAG +
Preference number: 6 (lower is better)
Translates to: LRQAHFSQLSLR*CQQYWDASISQ
Trigger: CTGGGAGATGGAAGCATCCCAGTATTGCTGGCAGCATCTCAGGGAGAGCTGGGAGAAATGAGCTTGTCTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000470145.3
ENST00000619344.4
ENST00000647223.1
CDS GCA 72 bp AACCGCTGCTCAGGGTTCAAGCTGGGAGTAAGCACTTaGTTCCCTCCACGCACCTGGTTTAGATTGGGAAAG +
Preference number: 6 (lower is better)
Translates to: NRCSGFKLGVST*FPPRTWFRLGK
Trigger: CTTTCCCAATCTAAACCAGGTGCGTGGAGGGAAGCAAGTGCTTACTCCCAGCTTGAACCCTGAGCAGCGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643168.1
ENST00000649901.1
CDS GCA 72 bp GGTGTCGCCCACAGGACACTAAAGTTAGAGAACCGCTaGTCAGGGTTCAAGCTGGGAGTAAGCACTTGCTTC +
Preference number: 6 (lower is better)
Translates to: GVAHRTLKLENR*SGFKLGVSTCF
Trigger: GAAGCAAGTGCTTACTCCCAGCTTGAACCCTGAGCAGCGGTTCTCTAACTTTAGTGTCCTGTGGGCGACACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643168.1
ENST00000649901.1
CDS CCA 72 bp CTAGAGACGGAATGGGACCATTGTCTGCAGGAACGGTaGGTCCTTGCTCCTCATCATCACTTTCCCAGGAAG +
Preference number: 6 (lower is better)
Translates to: LETEWDHCLQER*VLAPHHHFPRK
Trigger: CTTCCTGGGAAAGTGATGATGAGGAGCAAGGACCCACCGTTCCTGCAGACAATGGTCCCATTCCGTCTCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
ENST00000647223.1
CDS CCA 72 bp ATTCCACTGGTCAAAAGTATCACCAAGCCGCGCCCATaGCTCTCAGACAAGCTCATTTCTCCCAGCTCTCCC +
Preference number: 6 (lower is better)
Translates to: IPLVKSITKPRP*LSDKLISPSSP
Trigger: GGGAGAGCTGGGAGAAATGAGCTTGTCTGAGAGCCATGGGCGCGGCTTGGTGATACTTTTGACCAGTGGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000470145.3
ENST00000619344.4
ENST00000647223.1
CDS CAA 72 bp CAACAAAGGCATGTGGCTTTGGAGCCCAGTCTTCCCTaGGAGTCTGTACCCCACCAGACATGGAGTTTGTGC +
Preference number: 6 (lower is better)
Translates to: QQRHVALEPSLP*ESVPHQTWSLC
Trigger: GCACAAACTCCATGTCTGGTGGGGTACAGACTCCAAGGGAAGACTGGGCTCCAAAGCCACATGCCTTTGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
ENST00000647223.1
CDS CAA 72 bp GAAAGTGATGCACTGTGGCTCGCACCAAAGTTTGCTTaGTGGCTCAGCTGCACCACACTTCCAGCAAGGCCT +
Preference number: 6 (lower is better)
Translates to: ESDALWLAPKFA*WLSCTTLPARP
Trigger: AGGCCTTGCTGGAAGTGTGGTGCAGCTGAGCCACAAAGCAAACTTTGGTGCGAGCCACAGTGCATCACTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
ENST00000647223.1
CDS CAA 72 bp CGCACCTGGTTTAGATTGGGAAAGCTCAACATGCCATaGGCGTCCTTGAATGTGGGGTCGCTTTTCCACCCC +
Preference number: 6 (lower is better)
Translates to: RTWFRLGKLNMP*ASLNVGSLFHP
Trigger: GGGGTGGAAAAGCGACCCCACATTCAAGGACGCCAATGGCATGTTGAGCTTTCCCAATCTAAACCAGGTGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643168.1
ENST00000649901.1
CDS CAA 90 bp CCACGCTGTATACGCACTGATTCTCCTGGGACACACAAGCCACTTTaGATTTCAGCCTCCTCCTGGCCCACGTTCTGCTGCAATGACTCT +
Preference number: 6 (lower is better)
Translates to: PRCIRTDSPGTHKPL*ISASSWPTFCCNDS
Trigger: AGAGTCATTGCAGCAGAACGTGGGCCAGGAGGAGGCTGAAATCAAAAGTGGCTTGTGTGTCCCAGGAGAATCAGTGCGTATACAGCGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000553345.5
ENST00000613218.4
ENST00000620121.4
ENST00000644168.1
ENST00000646985.1
ENST00000647223.1
ENST00000651418.1
CDS CAA 90 bp AGTCTTCCCTTGGAGTCTGTACCCCACCAGACATGGAGTTTGTGCTaGGTCCCAACTTCCCACTGGGAAAAACTGGAGGGATCTCAGCAG +
Preference number: 6 (lower is better)
Translates to: SLPLESVPHQTWSLC*VPTSHWEKLEGSQQ
Trigger: CTGCTGAGATCCCTCCAGTTTTTCCCAGTGGGAAGTTGGGACCAAGCACAAACTCCATGTCTGGTGGGGTACAGACTCCAAGGGAAGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
ENST00000647223.1
CDS CAA 90 bp AAGCTGGGAGTAAGCACTTGCTTCCCTCCACGCACCTGGTTTAGATaGGGAAAGCTCAACATGCCATTGGCGTCCTTGAATGTGGGGTCG +
Preference number: 6 (lower is better)
Translates to: KLGVSTCFPPRTWFR*GKLNMPLASLNVGS
Trigger: CGACCCCACATTCAAGGACGCCAATGGCATGTTGAGCTTTCCCAATCTAAACCAGGTGCGTGGAGGGAAGCAAGTGCTTACTCCCAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643168.1
ENST00000649901.1
CDS TCA 72 bp GGCAGCCCAGAAGAGGGGCACCTAACTTCAATGAGTTaGGCGAAAGACGGCATGGAGGTGAATAACGATCAG +
Preference number: 6 (lower is better)
Translates to: GSPEEGHLTSMS*AKDGMEVNNDQ
Trigger: CTGATCGTTATTCACCTCCATGCCGTCTTTCGCTCAACTCATTGAAGTTAGGTGCCCCTCTTCTGGGCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644060.1
CDS TCA 72 bp AGCTGGATGGCGAGACCACTGCAGGGCATCCTTCTGTaGCAGCAAGGTACAACTCAGGTGAACAAAACCCTA +
Preference number: 6 (lower is better)
Translates to: SWMARPLQGILL*QQGTTQVNKTL
Trigger: TAGGGTTTTGTTCACCTGAGTTGTACCTTGCTGTCACAGAAGGATGCCCTGCAGTGGTCTCGCCATCCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644060.1
CDS CCA 72 bp GGGACACACAAGCCACTTTTGATTTCAGCCTCCTCCTaGCCCACGTTCTGCTGCAATGACTCTTCTTTGGTC +
Preference number: 6 (lower is better)
Translates to: GTHKPLLISASS*PTFCCNDSSLV
Trigger: GACCAAAGAAGAGTCATTGCAGCAGAACGTGGGCCAGGAGGAGGCTGAAATCAAAAGTGGCTTGTGTGTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000553345.5
ENST00000613218.4
ENST00000620121.4
ENST00000644168.1
ENST00000646985.1
ENST00000647223.1
ENST00000651418.1
CDS CCA 72 bp AGTGGTACTTGTGGGGATTCTGACATGCTGTCATCGTaGGCTGGTGGAAGAACCTTCTCTAGGGGCAAGCTA +
Preference number: 6 (lower is better)
Translates to: SGTCGDSDMLSS*AGGRTFSRGKL
Trigger: TAGCTTGCCCCTAGAGAAGGTTCTTCCACCAGCCCACGATGACAGCATGTCAGAATCCCCACAAGTACCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
ENST00000647223.1
CDS CCA 72 bp CAGACATGGAGTTTGTGCTTGGTCCCAACTTCCCACTaGGAAAAACTGGAGGGATCTCAGCAGGAAGAGGCA +
Preference number: 6 (lower is better)
Translates to: QTWSLCLVPTSH*EKLEGSQQEEA
Trigger: TGCCTCTTCCTGCTGAGATCCCTCCAGTTTTTCCCAGTGGGAAGTTGGGACCAAGCACAAACTCCATGTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
ENST00000647223.1
CDS CCA 72 bp TGGAGTCTGTACCCCACCAGACATGGAGTTTGTGCTTaGTCCCAACTTCCCACTGGGAAAAACTGGAGGGAT +
Preference number: 6 (lower is better)
Translates to: WSLYPTRHGVCA*SQLPTGKNWRD
Trigger: ATCCCTCCAGTTTTTCCCAGTGGGAAGTTGGGACCAAGCACAAACTCCATGTCTGGTGGGGTACAGACTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
ENST00000647223.1
CDS CCA 72 bp AAGCTGGGAGTAAGCACTTGCTTCCCTCCACGCACCTaGTTTAGATTGGGAAAGCTCAACATGCCATTGGCG +
Preference number: 6 (lower is better)
Translates to: KLGVSTCFPPRT*FRLGKLNMPLA
Trigger: CGCCAATGGCATGTTGAGCTTTCCCAATCTAAACCAGGTGCGTGGAGGGAAGCAAGTGCTTACTCCCAGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643168.1
ENST00000649901.1
CDS CAA 72 bp GCATGGAAGGTCCGAGAGTTGATCAGGGCACGGAGGTaGGTGTTGACAAGAATGGACCCAGGTGTCTCAAAA +
Preference number: 6 (lower is better)
Translates to: AWKVRELIRARR*VLTRMDPGVSK
Trigger: TTTTGAGACACCTGGGTCCATTCTTGTCAACACCAACCTCCGTGCCCTGATCAACTCTCGGACCTTCCATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000553345.5
ENST00000555564.2
ENST00000613218.4
ENST00000619344.4
ENST00000620121.4
ENST00000646985.1
ENST00000647223.1
ENST00000651418.1
CDS CAA 72 bp TTGGAGTCTGTACCCCACCAGACATGGAGTTTGTGCTaGGTCCCAACTTCCCACTGGGAAAAACTGGAGGGA +
Preference number: 6 (lower is better)
Translates to: LESVPHQTWSLC*VPTSHWEKLEG
Trigger: TCCCTCCAGTTTTTCCCAGTGGGAAGTTGGGACCAAGCACAAACTCCATGTCTGGTGGGGTACAGACTCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
ENST00000647223.1
CDS CAA 72 bp GCAAGGAAAGTGATGCACTGTGGCTCGCACCAAAGTTaGCTTTGTGGCTCAGCTGCACCACACTTCCAGCAA +
Preference number: 6 (lower is better)
Translates to: ARKVMHCGSHQS*LCGSAAPHFQQ
Trigger: TTGCTGGAAGTGTGGTGCAGCTGAGCCACAAAGCAAACTTTGGTGCGAGCCACAGTGCATCACTTTCCTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
ENST00000647223.1
CDS CAA 90 bp CGCATGTCACCATTCACCTTGGACAGTGGGGCAGATTGGTTCCAATaGGGTTTCTCATCCTTGTCCACCGAAGATCCCTTTGTCACTGCA +
Preference number: 6 (lower is better)
Translates to: RMSPFTLDSGADWFQ*GFSSLSTEDPFVTA
Trigger: TGCAGTGACAAAGGGATCTTCGGTGGACAAGGATGAGAAACCCAATTGGAACCAATCTGCCCCACTGTCCAAGGTGAATGGTGACATGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
ENST00000647223.1
CDS CAA 90 bp ATTTGCAAGGAAAGTGATGCACTGTGGCTCGCACCAAAGTTTGCTTaGTGGCTCAGCTGCACCACACTTCCAGCAAGGCCTTTGGGAAAG +
Preference number: 6 (lower is better)
Translates to: ICKESDALWLAPKFA*WLSCTTLPARPLGK
Trigger: CTTTCCCAAAGGCCTTGCTGGAAGTGTGGTGCAGCTGAGCCACAAAGCAAACTTTGGTGCGAGCCACAGTGCATCACTTTCCTTGCAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
ENST00000647223.1
CDS TCA 72 bp GATTTCAGCCTCCTCCTGGCCCACGTTCTGCTGCAATaGCTCTTCTTTGGTCAAACCCAGCTTCTGTCCATA +
Preference number: 6 (lower is better)
Translates to: DFSLLLAHVLLQ*LFFGQTQLLSI
Trigger: TATGGACAGAAGCTGGGTTTGACCAAAGAAGAGTCATTGCAGCAGAACGTGGGCCAGGAGGAGGCTGAAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000553345.5
ENST00000613218.4
ENST00000620121.4
ENST00000644168.1
ENST00000646985.1
ENST00000647223.1
ENST00000651418.1
CDS TCA 72 bp CCTTCAAAGTCAGAGGCTGTATCCGTGGACTCACCGTaGGGACTCAGTGCTTCAGAGTCTCCGTTGATTTTC +
Preference number: 6 (lower is better)
Translates to: PSKSEAVSVDSP*GLSASESPLIF
Trigger: GAAAATCAACGGAGACTCTGAAGCACTGAGTCCTCACGGTGAGTCCACGGATACAGCCTCTGACTTTGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
ENST00000647223.1
CDS GCA 72 bp GCTTTTCAATGTCCACCTGTTGACAGTAACTGCCATTaGTGTCACTGCCTCCTCGAGATGGCACAGTCCAGA +
Preference number: 6 (lower is better)
Translates to: AFQCPPVDSNCH*CHCLLEMAQSR
Trigger: TCTGGACTGTGCCATCTCGAGGAGGCAGTGACAGCAATGGCAGTTACTGTCAACAGGTGGACATTGAAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
ENST00000647223.1
CDS CCA 72 bp GATGGGCGGGACTTTGGGCTCCTCTTTAGTGGGCTGTaGCTTTTCGGTGTGAACACTTTCAATTGTGTTACG +
Preference number: 6 (lower is better)
Translates to: DGRDFGLLFSGL*LFGVNTFNCVT
Trigger: CGTAACACAATTGAAAGTGTTCACACCGAAAAGCCACAGCCCACTAAAGAGGAGCCCAAAGTCCCGCCCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000644168.1
ENST00000646985.1
ENST00000647223.1
ENST00000651418.1
CDS CCA 72 bp CGCATGTCACCATTCACCTTGGACAGTGGGGCAGATTaGTTCCAATTGGGTTTCTCATCCTTGTCCACCGAA +
Preference number: 6 (lower is better)
Translates to: RMSPFTLDSGAD*FQLGFSSLSTE
Trigger: TTCGGTGGACAAGGATGAGAAACCCAATTGGAACCAATCTGCCCCACTGTCCAAGGTGAATGGTGACATGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
ENST00000647223.1
CDS CCA 72 bp AGTCTTCTCATTCTTGACGCTGCCAACAAAGGCATGTaGCTTTGGAGCCCAGTCTTCCCTTGGAGTCTGTAC +
Preference number: 6 (lower is better)
Translates to: SLLILDAANKGM*LWSPVFPWSLY
Trigger: GTACAGACTCCAAGGGAAGACTGGGCTCCAAAGCCACATGCCTTTGTTGGCAGCGTCAAGAATGAGAAGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
ENST00000647223.1
CDS CAA 72 bp TGGAAGTGTGATGGTAAGGCATGGAAGGTCCGAGAGTaGATCAGGGCACGGAGGTTGGTGTTGACAAGAATG +
Preference number: 6 (lower is better)
Translates to: WKCDGKAWKVRE*IRARRLVLTRM
Trigger: CATTCTTGTCAACACCAACCTCCGTGCCCTGATCAACTCTCGGACCTTCCATGCCTTACCATCACACTTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000553345.5
ENST00000555564.2
ENST00000613218.4
ENST00000619344.4
ENST00000620121.4
ENST00000646985.1
ENST00000647223.1
ENST00000651418.1
CDS CAA 72 bp AATGTATCATCTCCCACTAGAGACGGAATGGGACCATaGTCTGCAGGAACGGTGGGTCCTTGCTCCTCATCA +
Preference number: 6 (lower is better)
Translates to: NVSSPTRDGMGP*SAGTVGPCSSS
Trigger: TGATGAGGAGCAAGGACCCACCGTTCCTGCAGACAATGGTCCCATTCCGTCTCTAGTGGGAGATGATACATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
ENST00000647223.1
CDS CAA 72 bp ACGCATGTCACCATTCACCTTGGACAGTGGGGCAGATaGGTTCCAATTGGGTTTCTCATCCTTGTCCACCGA +
Preference number: 6 (lower is better)
Translates to: THVTIHLGQWGR*VPIGFLILVHR
Trigger: TCGGTGGACAAGGATGAGAAACCCAATTGGAACCAATCTGCCCCACTGTCCAAGGTGAATGGTGACATGCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
ENST00000647223.1
CDS CAA 90 bp AAGGCATGGAAGGTCCGAGAGTTGATCAGGGCACGGAGGTTGGTGTaGACAAGAATGGACCCAGGTGTCTCAAAATCTATTTCTTCCCCT +
Preference number: 6 (lower is better)
Translates to: KAWKVRELIRARRLV*TRMDPGVSKSISSP
Trigger: AGGGGAAGAAATAGATTTTGAGACACCTGGGTCCATTCTTGTCAACACCAACCTCCGTGCCCTGATCAACTCTCGGACCTTCCATGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000553345.5
ENST00000555564.2
ENST00000613218.4
ENST00000619344.4
ENST00000620121.4
ENST00000646985.1
ENST00000647223.1
ENST00000651418.1
CDS CAA 90 bp CCTTTCTCTAATGTATCATCTCCCACTAGAGACGGAATGGGACCATaGTCTGCAGGAACGGTGGGTCCTTGCTCCTCATCATCACTTTCC +
Preference number: 6 (lower is better)
Translates to: PFSNVSSPTRDGMGP*SAGTVGPCSSSSLS
Trigger: GGAAAGTGATGATGAGGAGCAAGGACCCACCGTTCCTGCAGACAATGGTCCCATTCCGTCTCTAGTGGGAGATGATACATTAGAGAAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
ENST00000647223.1
CDS CAA 90 bp ACCTTGGACAGTGGGGCAGATTGGTTCCAATTGGGTTTCTCATCCTaGTCCACCGAAGATCCCTTTGTCACTGCAGCTTCTCTAGTGTCA +
Preference number: 6 (lower is better)
Translates to: TLDSGADWFQLGFSS*STEDPFVTAASLVS
Trigger: TGACACTAGAGAAGCTGCAGTGACAAAGGGATCTTCGGTGGACAAGGATGAGAAACCCAATTGGAACCAATCTGCCCCACTGTCCAAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
ENST00000647223.1
CDS CAA 90 bp TGTAACCAGACGCATGTCACCATTCACCTTGGACAGTGGGGCAGATaGGTTCCAATTGGGTTTCTCATCCTTGTCCACCGAAGATCCCTT +
Preference number: 6 (lower is better)
Translates to: CNQTHVTIHLGQWGR*VPIGFLILVHRRSL
Trigger: AAGGGATCTTCGGTGGACAAGGATGAGAAACCCAATTGGAACCAATCTGCCCCACTGTCCAAGGTGAATGGTGACATGCGTCTGGTTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
ENST00000647223.1
CDS CAA 90 bp ACCATCCCATCTGTCCTTGTAACCAGACGCATGTCACCATTCACCTaGGACAGTGGGGCAGATTGGTTCCAATTGGGTTTCTCATCCTTG +
Preference number: 6 (lower is better)
Translates to: TIPSVLVTRRMSPFT*DSGADWFQLGFSSL
Trigger: CAAGGATGAGAAACCCAATTGGAACCAATCTGCCCCACTGTCCAAGGTGAATGGTGACATGCGTCTGGTTACAAGGACAGATGGGATGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
ENST00000647223.1
CDS TCA 72 bp GTCATCAAATGCTCTGTTCTGCAGGCAATCAGTCGGTaGGGATTCAGGTGTGGAACTGGGGGTCACATTTAC +
Preference number: 6 (lower is better)
Translates to: VIKCSVLQAISR*GFRCGTGGHIY
Trigger: GTAAATGTGACCCCCAGTTCCACACCTGAATCCTCACCGACTGATTGCCTGCAGAACAGAGCATTTGATGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
ENST00000647223.1
CDS TCA 72 bp GCTCTGGTCTTTTGTAAGTGGTACTTGTGGGGATTCTaGCATGCTGTCATCGTGGGCTGGTGGAAGAACCTT +
Preference number: 6 (lower is better)
Translates to: ALVFCKWYLWGF*HAVIVGWWKNL
Trigger: AAGGTTCTTCCACCAGCCCACGATGACAGCATGTCAGAATCCCCACAAGTACCACTTACAAAAGACCAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
ENST00000647223.1
CDS TCA 72 bp AGGTCCCCAGGACCTGAGGAAAAAGCATCACAACCATaGGTTTACACATACCTGATGCAGATTCCACGTGGG +
Preference number: 6 (lower is better)
Translates to: RSPGPEEKASQP*VYTYLMQIPRG
Trigger: CCCACGTGGAATCTGCATCAGGTATGTGTAAACTCATGGTTGTGATGCTTTTTCCTCAGGTCCTGGGGACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000470145.3
ENST00000644615.1
ENST00000647223.1
CDS GCA 72 bp CCACCAAGCCCTAATTCGTCATCAAATGCTCTGTTCTaGAGGCAATCAGTCGGTGAGGATTCAGGTGTGGAA +
Preference number: 6 (lower is better)
Translates to: PPSPNSSSNALF*RQSVGEDSGVE
Trigger: TTCCACACCTGAATCCTCACCGACTGATTGCCTGCAGAACAGAGCATTTGATGACGAATTAGGGCTTGGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
ENST00000647223.1
CDS GCA 72 bp CGTTCCAAGAGAGAACAAAAGAGAGCCCAAGTCAACTaGAGAGCCACAAAAGCATTCCCTGGCGACACTATC +
Preference number: 6 (lower is better)
Translates to: RSKREQKRAQVN*RATKAFPGDTI
Trigger: GATAGTGTCGCCAGGGAATGCTTTTGTGGCTCTGCAGTTGACTTGGGCTCTCTTTTGTTCTCTCTTGGAACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647223.1
CDS CCA 72 bp TTTGTACAGATTCCTTCTGGCTCTGGTTCGGAGATCTaGCCGAGAGCGTTTCTTAAAATGCCCATCTCGCTG +
Preference number: 6 (lower is better)
Translates to: FVQIPSGSGSEI*PRAFLKMPISL
Trigger: CAGCGAGATGGGCATTTTAAGAAACGCTCTCGGCCAGATCTCCGAACCAGAGCCAGAAGGAATCTGTACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000644168.1
ENST00000646985.1
ENST00000647223.1
ENST00000651418.1
CDS CCA 72 bp CTTTCTCTAATGTATCATCTCCCACTAGAGACGGAATaGGACCATTGTCTGCAGGAACGGTGGGTCCTTGCT +
Preference number: 6 (lower is better)
Translates to: LSLMYHLPLETE*DHCLQERWVLA
Trigger: AGCAAGGACCCACCGTTCCTGCAGACAATGGTCCCATTCCGTCTCTAGTGGGAGATGATACATTAGAGAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
ENST00000647223.1
CDS CCA 72 bp TTTCTCCCACTCCTCTCCAACCTGGGGCTCAACAGATaGTATGTGTTCTCTGGATTCTGGTTTGGGCTGTTT +
Preference number: 6 (lower is better)
Translates to: FLPLLSNLGLNR*YVFSGFWFGLF
Trigger: AAACAGCCCAAACCAGAATCCAGAGAACACATACCATCTGTTGAGCCCCAGGTTGGAGAGGAGTGGGAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
ENST00000647223.1
CDS CCA 72 bp CATTCACCTTGGACAGTGGGGCAGATTGGTTCCAATTaGGTTTCTCATCCTTGTCCACCGAAGATCCCTTTG +
Preference number: 6 (lower is better)
Translates to: HSPWTVGQIGSN*VSHPCPPKIPL
Trigger: CAAAGGGATCTTCGGTGGACAAGGATGAGAAACCCAATTGGAACCAATCTGCCCCACTGTCCAAGGTGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
ENST00000647223.1
CDS CCA 72 bp CCATGTAAAGATCCCATGCGTAGCGAGCCATGGCTCTaGTCTTTTGTAAGTGGTACTTGTGGGGATTCTGAC +
Preference number: 6 (lower is better)
Translates to: PCKDPMRSEPWL*SFVSGTCGDSD
Trigger: GTCAGAATCCCCACAAGTACCACTTACAAAAGACCAGAGCCATGGCTCGCTACGCATGGGATCTTTACATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
ENST00000647223.1
CDS CCA 72 bp CCAAGACCATGTAAAGATCCCATGCGTAGCGAGCCATaGCTCTGGTCTTTTGTAAGTGGTACTTGTGGGGAT +
Preference number: 6 (lower is better)
Translates to: PRPCKDPMRSEP*LWSFVSGTCGD
Trigger: ATCCCCACAAGTACCACTTACAAAAGACCAGAGCCATGGCTCGCTACGCATGGGATCTTTACATGGTCTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
ENST00000647223.1
CDS CCA 72 bp ACCATGAGTTTACACATACCTGATGCAGATTCCACGTaGGCCCCGTTTACCTTCAGAGGAGTCAGGACAACT +
Preference number: 6 (lower is better)
Translates to: TMSLHIPDADST*APFTFRGVRTT
Trigger: AGTTGTCCTGACTCCTCTGAAGGTAAACGGGGCCCACGTGGAATCTGCATCAGGTATGTGTAAACTCATGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000470145.3
ENST00000644615.1
ENST00000647223.1
CDS CCA 72 bp AAGGCCTACTTAAAAGAACAGCCCTTGGCTGACATCTaGGAACTTAGATTTCAGGAGGGTTCCCAACCACCC +
Preference number: 6 (lower is better)
Translates to: KAYLKEQPLADI*ELRFQEGSQPP
Trigger: GGGTGGTTGGGAACCCTCCTGAAATCTAAGTTCCCAGATGTCAGCCAAGGGCTGTTCTTTTAAGTAGGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644168.1
CDS CAA 72 bp AGTGGGGCAGATTGGTTCCAATTGGGTTTCTCATCCTaGTCCACCGAAGATCCCTTTGTCACTGCAGCTTCT +
Preference number: 6 (lower is better)
Translates to: SGADWFQLGFSS*STEDPFVTAAS
Trigger: AGAAGCTGCAGTGACAAAGGGATCTTCGGTGGACAAGGATGAGAAACCCAATTGGAACCAATCTGCCCCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
ENST00000647223.1
CDS CAA 72 bp TCTGTCCTTGTAACCAGACGCATGTCACCATTCACCTaGGACAGTGGGGCAGATTGGTTCCAATTGGGTTTC +
Preference number: 6 (lower is better)
Translates to: SVLVTRRMSPFT*DSGADWFQLGF
Trigger: GAAACCCAATTGGAACCAATCTGCCCCACTGTCCAAGGTGAATGGTGACATGCGTCTGGTTACAAGGACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
ENST00000647223.1
CDS CAA 72 bp AATACCTGGTTTAGATTGGGAAAGCTCAACATGCCATaGGCGTCCTTGAATGTGGGGTCGCTTTTCCACCCC +
Preference number: 6 (lower is better)
Translates to: NTWFRLGKLNMP*ASLNVGSLFHP
Trigger: GGGGTGGAAAAGCGACCCCACATTCAAGGACGCCAATGGCATGTTGAGCTTTCCCAATCTAAACCAGGTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000497249.6
ENST00000645035.1
ENST00000646985.1
CDS CAA 72 bp CTGTCATTGCCATCAAACCCAGGAGAACACTTGGGGTaGCATCTCCTCAGACAAAACTCTGTACCGTGCTGT +
Preference number: 6 (lower is better)
Translates to: LSLPSNPGEHLG*HLLRQNSVPCC
Trigger: ACAGCACGGTACAGAGTTTTGTCTGAGGAGATGCAACCCCAAGTGTTCTCCTGGGTTTGATGGCAATGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553345.5
ENST00000647223.1
CDS CAA 72 bp GTAAGCACTTGCTTCCCTCCACGCACCTGGTTTAGATaGGGAAAGCTCAACATGCCATTGGCGTCCTTGAAT +
Preference number: 6 (lower is better)
Translates to: VSTCFPPRTWFR*GKLNMPLASLN
Trigger: ATTCAAGGACGCCAATGGCATGTTGAGCTTTCCCAATCTAAACCAGGTGCGTGGAGGGAAGCAAGTGCTTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643168.1
ENST00000649901.1
CDS CAA 90 bp GATGGTAAGGCATGGAAGGTCCGAGAGTTGATCAGGGCACGGAGGTaGGTGTTGACAAGAATGGACCCAGGTGTCTCAAAATCTATTTCT +
Preference number: 6 (lower is better)
Translates to: DGKAWKVRELIRARR*VLTRMDPGVSKSIS
Trigger: AGAAATAGATTTTGAGACACCTGGGTCCATTCTTGTCAACACCAACCTCCGTGCCCTGATCAACTCTCGGACCTTCCATGCCTTACCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000553345.5
ENST00000555564.2
ENST00000613218.4
ENST00000619344.4
ENST00000620121.4
ENST00000646985.1
ENST00000647223.1
ENST00000651418.1
CDS CAA 90 bp CCAACCTGGGGCTCAACAGATGGTATGTGTTCTCTGGATTCTGGTTaGGGCTGTTTCACTACCTCATCATTCGATGGGATGGGTATCCAA +
Preference number: 6 (lower is better)
Translates to: PTWGSTDGMCSLDSG*GCFTTSSFDGMGIQ
Trigger: TTGGATACCCATCCCATCGAATGATGAGGTAGTGAAACAGCCCAAACCAGAATCCAGAGAACACATACCATCTGTTGAGCCCCAGGTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
ENST00000647223.1
CDS CAA 90 bp TGCTTCAGAGTCTCCGTTGATTTTCAGCTTTTCAATGTCCACCTGTaGACAGTAACTGCCATTGCTGTCACTGCCTCCTCGAGATGGCAC +
Preference number: 6 (lower is better)
Translates to: CFRVSVDFQLFNVHL*TVTAIAVTASSRWH
Trigger: GTGCCATCTCGAGGAGGCAGTGACAGCAATGGCAGTTACTGTCAACAGGTGGACATTGAAAAGCTGAAAATCAACGGAGACTCTGAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
ENST00000647223.1
CDS TCA 72 bp CCAGACTCACATTCAGTTCTAACATCCGGATGCAACTaGGGCTGCTCCACTAATCTCTCAGCTACTGAGGTT +
Preference number: 6 (lower is better)
Translates to: PDSHSVLTSGCN*GCSTNLSATEV
Trigger: AACCTCAGTAGCTGAGAGATTAGTGGAGCAGCCTCAGTTGCATCCGGATGTTAGAACTGAATGTGAGTCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
ENST00000647223.1
CDS TCA 72 bp GACGCTCTGAACACAAAATTCACAACCCCCATCGGTTaGACGAGACGGCTTCAAACACTCAAGTTACGCTCT +
Preference number: 6 (lower is better)
Translates to: DALNTKFTTPIG*TRRLQTLKLRS
Trigger: AGAGCGTAACTTGAGTGTTTGAAGCCGTCTCGTTCAACCGATGGGGGTTGTGAATTTTGTGTTCAGAGCGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375689.5
ENST00000649901.1
CDS TCA 72 bp GCAATACTGGGATGCTTCCATCTCCCAGCCTTAGGCTaGGAGAAACCACCACTTCATGGTCTGGCTTTAAAA +
Preference number: 6 (lower is better)
Translates to: AILGCFHLPALG*EKPPLHGLALK
Trigger: TTTTAAAGCCAGACCATGAAGTGGTGGTTTCTCTCAGCCTAAGGCTGGGAGATGGAAGCATCCCAGTATTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470145.3
ENST00000647223.1
CDS GCA 72 bp TTTTCAGCTTTTCAATGTCCACCTGTTGACAGTAACTaGCATTGCTGTCACTGCCTCCTCGAGATGGCACAG +
Preference number: 6 (lower is better)
Translates to: FSAFQCPPVDSN*HCCHCLLEMAQ
Trigger: CTGTGCCATCTCGAGGAGGCAGTGACAGCAATGGCAGTTACTGTCAACAGGTGGACATTGAAAAGCTGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
ENST00000647223.1
CDS GCA 72 bp AGAGGCTGTATCCGTGGACTCACCGTGAGGACTCAGTaGTTCAGAGTCTCCGTTGATTTTCAGCTTTTCAAT +
Preference number: 6 (lower is better)
Translates to: RGCIRGLTVRTQ*FRVSVDFQLFN
Trigger: ATTGAAAAGCTGAAAATCAACGGAGACTCTGAAGCACTGAGTCCTCACGGTGAGTCCACGGATACAGCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
ENST00000647223.1
CDS CCA 72 bp CTCCAACCTGGGGCTCAACAGATGGTATGTGTTCTCTaGATTCTGGTTTGGGCTGTTTCACTACCTCATCAT +
Preference number: 6 (lower is better)
Translates to: LQPGAQQMVCVL*ILVWAVSLPHH
Trigger: ATGATGAGGTAGTGAAACAGCCCAAACCAGAATCCAGAGAACACATACCATCTGTTGAGCCCCAGGTTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
ENST00000647223.1
CDS CCA 72 bp TGTAACCAGACGCATGTCACCATTCACCTTGGACAGTaGGGCAGATTGGTTCCAATTGGGTTTCTCATCCTT +
Preference number: 6 (lower is better)
Translates to: CNQTHVTIHLGQ*GRLVPIGFLIL
Trigger: AAGGATGAGAAACCCAATTGGAACCAATCTGCCCCACTGTCCAAGGTGAATGGTGACATGCGTCTGGTTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
ENST00000647223.1
CDS CCA 72 bp CCTTTTACAAAGCACTGGCATAATCAAATCCTCCGTTaGATCCTCACGACTGCCCTGGGAGACAAAGAGGAA +
Preference number: 6 (lower is better)
Translates to: PFTKHWHNQILR*ILTTALGDKEE
Trigger: TTCCTCTTTGTCTCCCAGGGCAGTCGTGAGGATCCAACGGAGGATTTGATTATGCCAGTGCTTTGTAAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470145.3
ENST00000647223.1
CDS CCA 72 bp GGTTACTGTCATTGCCATCAAACCCAGGAGAACACTTaGGGTTGCATCTCCTCAGACAAAACTCTGTACCGT +
Preference number: 6 (lower is better)
Translates to: GYCHCHQTQENT*GCISSDKTLYR
Trigger: ACGGTACAGAGTTTTGTCTGAGGAGATGCAACCCCAAGTGTTCTCCTGGGTTTGATGGCAATGACAGTAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553345.5
ENST00000647223.1
CDS CCA 72 bp AGCCCAAGTCAACTGCAGAGCCACAAAAGCATTCCCTaGCGACACTATCTCTACTCACGCTCTTGTAAAATG +
Preference number: 6 (lower is better)
Translates to: SPSQLQSHKSIP*RHYLYSRSCKM
Trigger: CATTTTACAAGAGCGTGAGTAGAGATAGTGTCGCCAGGGAATGCTTTTGTGGCTCTGCAGTTGACTTGGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647223.1
CDS CAA 72 bp AAGGTCCGAGAGTTGATCAGGGCACGGAGGTTGGTGTaGACAAGAATGGACCCAGGTGTCTCAAAATCTATT +
Preference number: 6 (lower is better)
Translates to: KVRELIRARRLV*TRMDPGVSKSI
Trigger: AATAGATTTTGAGACACCTGGGTCCATTCTTGTCAACACCAACCTCCGTGCCCTGATCAACTCTCGGACCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000553345.5
ENST00000555564.2
ENST00000613218.4
ENST00000619344.4
ENST00000620121.4
ENST00000646985.1
ENST00000647223.1
ENST00000651418.1
CDS CAA 72 bp GTCTCCGTTGATTTTCAGCTTTTCAATGTCCACCTGTaGACAGTAACTGCCATTGCTGTCACTGCCTCCTCG +
Preference number: 6 (lower is better)
Translates to: VSVDFQLFNVHL*TVTAIAVTASS
Trigger: CGAGGAGGCAGTGACAGCAATGGCAGTTACTGTCAACAGGTGGACATTGAAAAGCTGAAAATCAACGGAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
ENST00000647223.1
CDS CAA 90 bp TGTCCAGTCCATCCTAACCTGTATATTCTTTCCAGGTTACTGTCATaGCCATCAAACCCAGGAGAACACTTGGGGTTGCATCTCCTCAGA +
Preference number: 6 (lower is better)
Translates to: CPVHPNLYILSRLLS*PSNPGEHLGLHLLR
Trigger: TCTGAGGAGATGCAACCCCAAGTGTTCTCCTGGGTTTGATGGCAATGACAGTAACCTGGAAAGAATATACAGGTTAGGATGGACTGGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647223.1
CDS TCA 72 bp ACTCACCGTGAGGACTCAGTGCTTCAGAGTCTCCGTTaGTTTTCAGCTTTTCAATGTCCACCTGTTGACAGT +
Preference number: 6 (lower is better)
Translates to: THREDSVLQSLR*FSAFQCPPVDS
Trigger: ACTGTCAACAGGTGGACATTGAAAAGCTGAAAATCAACGGAGACTCTGAAGCACTGAGTCCTCACGGTGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
ENST00000647223.1
CDS TCA 72 bp AACTCACTAGGACTAGAGACCTGTGAGACCTTAGATTaGGCACTGCTGATGAGCTGGAAAAGCAGCAAGACA +
Preference number: 6 (lower is better)
Translates to: NSLGLETCETLD*ALLMSWKSSKT
Trigger: TGTCTTGCTGCTTTTCCAGCTCATCAGCAGTGCTCAATCTAAGGTCTCACAGGTCTCTAGTCCTAGTGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647223.1
CDS TCA 72 bp AAGGAAGCTATTTCACCTGCAAGTCCTCTGACGCTCTaGACACAAAATTCACAACCCCCATCGGTTGAACGA +
Preference number: 6 (lower is better)
Translates to: KEAISPASPLTL*TQNSQPPSVER
Trigger: TCGTTCAACCGATGGGGGTTGTGAATTTTGTGTTCAGAGCGTCAGAGGACTTGCAGGTGAAATAGCTTCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649901.1
CDS GCA 72 bp GGAACTCAGTTGGAGTTTAGAAAGCTTCCCATAAAATaGCTGCTTGATGCTGAGTTGGGAGGGGAGAGAAGA +
Preference number: 6 (lower is better)
Translates to: GTQLEFRKLPIK*LLDAELGGERR
Trigger: TCTTCTCTCCCCTCCCAACTCAGCATCAAGCAGGCATTTTATGGGAAGCTTTCTAAACTCCAACTGAGTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
ENST00000647223.1
CDS GCA 72 bp CTCCTCATTTCCTTTAGTCCTTCTGCCTCTATGACCTaGAGAATCTGTTTTGGTGTCATTGGAGCATCCGAG +
Preference number: 6 (lower is better)
Translates to: LLISFSPSASMT*RICFGVIGASE
Trigger: CTCGGATGCTCCAATGACACCAAAACAGATTCTGCAGGTCATAGAGGCAGAAGGACTAAAGGAAATGAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542461.5
ENST00000613218.4
ENST00000620121.4
CDS GCA 72 bp GCACCCAAGCTACCCAGGAGTTATCTGCACACAATCTaGTCAATTGTCCAGTCCATCCTAACCTGTATATTC +
Preference number: 6 (lower is better)
Translates to: APKLPRSYLHTI*SIVQSILTCIF
Trigger: GAATATACAGGTTAGGATGGACTGGACAATTGAGCAGATTGTGTGCAGATAACTCCTGGGTAGCTTGGGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647223.1
CDS CCA 72 bp GCTCAACAGATGGTATGTGTTCTCTGGATTCTGGTTTaGGCTGTTTCACTACCTCATCATTCGATGGGATGG +
Preference number: 6 (lower is better)
Translates to: AQQMVCVLWILV*AVSLPHHSMGW
Trigger: CCATCCCATCGAATGATGAGGTAGTGAAACAGCCCAAACCAGAATCCAGAGAACACATACCATCTGTTGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
ENST00000647223.1
CDS CCA 72 bp TTCCAGTTTCCTAGAGGATGTAATGGGATTTGTCACTaGATGGAGGGAGTCAAAACTTGGGACTGCCTTGCA +
Preference number: 6 (lower is better)
Translates to: FQFPRGCNGICH*MEGVKTWDCLA
Trigger: TGCAAGGCAGTCCCAAGTTTTGACTCCCTCCATCCAGTGACAAATCCCATTACATCCTCTAGGAAACTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
ENST00000647223.1
CDS CCA 72 bp TCTCCCAGCCTTAGGCTGAGAGAAACCACCACTTCATaGTCTGGCTTTAAAATATCACCTTACAGGTGCCAA +
Preference number: 6 (lower is better)
Translates to: SPSLRLRETTTS*SGFKISPYRCQ
Trigger: TTGGCACCTGTAAGGTGATATTTTAAAGCCAGACCATGAAGTGGTGGTTTCTCTCAGCCTAAGGCTGGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470145.3
ENST00000647223.1
CDS CCA 72 bp CCTCTAACAAGTAAAACTCTGGCAAGCAAATTTCCTTaGGTGCCCAGGGTCATAAACACCCGCATAACAGGA +
Preference number: 6 (lower is better)
Translates to: PLTSKTLASKFP*VPRVINTRITG
Trigger: TCCTGTTATGCGGGTGTTTATGACCCTGGGCACCCAAGGAAATTTGCTTGCCAGAGTTTTACTTGTTAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645688.1
CDS CCA 72 bp GCGTCTGATACAGACTACAGATGTTGGGAACAAATGTaGCAACATGCTACCGAAGAGAGAAAAGGGGTGTTG +
Preference number: 6 (lower is better)
Translates to: ASDTDYRCWEQM*QHATEERKGVL
Trigger: CAACACCCCTTTTCTCTCTTCGGTAGCATGTTGCCACATTTGTTCCCAACATCTGTAGTCTGTATCAGACGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647223.1
CDS CAA 72 bp TCCTTAGCAACCCCTGCTTGTTCTGACTCCTGTTTTTaGTACAGATTCCTTCTGGCTCTGGTTCGGAGATCT +
Preference number: 6 (lower is better)
Translates to: SLATPACSDSCF*YRFLLALVRRS
Trigger: AGATCTCCGAACCAGAGCCAGAAGGAATCTGTACAAAAAACAGGAGTCAGAACAAGCAGGGGTTGCTAAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000644168.1
ENST00000646985.1
ENST00000647223.1
ENST00000651418.1
CDS CAA 72 bp GGCTCAACAGATGGTATGTGTTCTCTGGATTCTGGTTaGGGCTGTTTCACTACCTCATCATTCGATGGGATG +
Preference number: 6 (lower is better)
Translates to: GSTDGMCSLDSG*GCFTTSSFDGM
Trigger: CATCCCATCGAATGATGAGGTAGTGAAACAGCCCAAACCAGAATCCAGAGAACACATACCATCTGTTGAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
ENST00000647223.1
CDS CAA 90 bp TGTTGCGCTTCATTTGACCTGTATATTCTTTCCAGGTTACTGTCATaGCCATCAAACCCAGGAGAACACTTGGGGTTGCATCTCCTCAGA +
Preference number: 6 (lower is better)
Translates to: CCASFDLYILSRLLS*PSNPGEHLGLHLLR
Trigger: TCTGAGGAGATGCAACCCCAAGTGTTCTCCTGGGTTTGATGGCAATGACAGTAACCTGGAAAGAATATACAGGTCAAATGAAGCGCAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553345.5
CDS TCA 72 bp AGTTCTCCTCAAAATACCAATTTCCAGTCCAGCTTCTaGAGGCAAACAGCCCAGTCTGCGTTTCTCAAAGTG +
Preference number: 6 (lower is better)
Translates to: SSPQNTNFQSSF*RQTAQSAFLKV
Trigger: CACTTTGAGAAACGCAGACTGGGCTGTTTGCCTTCAGAAGCTGGACTGGAAATTGGTATTTTGAGGAGAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643168.1
ENST00000649901.1
CDS TCA 72 bp GGGACATACGAGAAACAGTATGGCATCATCTCTGCCTaGAAGGAGTTCTCACAGTTTAGCAGAGAGCTACAA +
Preference number: 6 (lower is better)
Translates to: GTYEKQYGIISA*KEFSQFSRELQ
Trigger: TTGTAGCTCTCTGCTAAACTGTGAGAACTCCTTTCAGGCAGAGATGATGCCATACTGTTTCTCGTATGTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647223.1
CDS GCA 72 bp CTTCTCATTTCCTTTAGTCCTTCTGCCTCTATGACCTaGAGAATCTGTTTTGGTGTCATTGGAGCATCCGAG +
Preference number: 6 (lower is better)
Translates to: LLISFSPSASMT*RICFGVIGASE
Trigger: CTCGGATGCTCCAATGACACCAAAACAGATTCTGCAGGTCATAGAGGCAGAAGGACTAAAGGAAATGAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000375687.10
ENST00000375689.5
ENST00000470145.3
ENST00000497249.6
ENST00000555343.2
ENST00000642676.1
ENST00000643168.1
ENST00000645035.1
ENST00000645337.1
ENST00000645688.1
ENST00000646367.1
ENST00000646985.1
ENST00000649901.1
ENST00000651418.1
CDS CCA 72 bp AGTTTCCTAGAGGATGTAATGGGATTTGTCACTGGATaGAGGGAGTCAAAACTTGGGACTGCCTTGCAATTC +
Preference number: 6 (lower is better)
Translates to: SFLEDVMGFVTG*RESKLGTALQF
Trigger: GAATTGCAAGGCAGTCCCAAGTTTTGACTCCCTCCATCCAGTGACAAATCCCATTACATCCTCTAGGAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
ENST00000647223.1
CDS CCA 72 bp ACTCTAACAAGTAAAACTCTGGCAAGCAAATTTCCTTaGGTGCCCAGGGTCATAAACACCCGCATAACAGGA +
Preference number: 6 (lower is better)
Translates to: TLTSKTLASKFP*VPRVINTRITG
Trigger: TCCTGTTATGCGGGTGTTTATGACCCTGGGCACCCAAGGAAATTTGCTTGCCAGAGTTTTACTTGTTAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555343.2
CDS TCA 72 bp ACACTCAAGTTACGCTCTCCCTTGCTAAATCCTCAGTaGACAACGTCTCCCAACAGAGATACTTTGTCTTTG +
Preference number: 6 (lower is better)
Translates to: TLKLRSPLLNPQ*TTSPNRDTLSL
Trigger: CAAAGACAAAGTATCTCTGTTGGGAGACGTTGTTCACTGAGGATTTAGCAAGGGAGAGCGTAACTTGAGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375689.5
ENST00000649901.1
CDS GCA 72 bp CATTTGACCTGTATATTCTTTCCAGGTTACTGTCATTaGCATCAAACCCAGGAGAACACTTGGGGTTGCATC +
Preference number: 6 (lower is better)
Translates to: HLTCIFFPGYCH*HQTQENTWGCI
Trigger: GATGCAACCCCAAGTGTTCTCCTGGGTTTGATGGCAATGACAGTAACCTGGAAAGAATATACAGGTCAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553345.5
CDS GCA 72 bp CTCCCACTCCCCATCAGGCCTATATTTGTTTCCAGGTaGAGAACCGTTAGAGAAATCCTGAAATTTCTACAA +
Preference number: 6 (lower is better)
Translates to: LPLPIRPIFVSR*RTVREILKFLQ
Trigger: TTGTAGAAATTTCAGGATTTCTCTAACGGTTCTGCACCTGGAAACAAATATAGGCCTGATGGGGAGTGGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555343.2
ENST00000645688.1
CDS GCA 72 bp TTGTTTATGCAAACAATACGGCTTATGCTGAACACCTaGCTTCCTTTTGGGAATCTGGAAGCTGGGTATGTG +
Preference number: 6 (lower is better)
Translates to: LFMQTIRLMLNT*LPFGNLEAGYV
Trigger: CACATACCCAGCTTCCAGATTCCCAAAAGGAAGGCAGGTGTTCAGCATAAGCCGTATTGTTTGCATAAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644168.1
CDS GCA 72 bp GGTAAGGAATTTTCCCCAAGTCTCAAGGCTAGTAAGTaGAGGGTTATCATTCAAACTGCTCACTCCCAATCT +
Preference number: 6 (lower is better)
Translates to: GKEFSPSLKASK*RVIIQTAHSQS
Trigger: AGATTGGGAGTGAGCAGTTTGAATGATAACCCTGCACTTACTAGCCTTGAGACTTGGGGAAAATTCCTTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647223.1
CDS GCA 72 bp ATCCTAACCTGTATATTCTTTCCAGGTTACTGTCATTaGCATCAAACCCAGGAGAACACTTGGGGTTGCATC +
Preference number: 6 (lower is better)
Translates to: ILTCIFFPGYCH*HQTQENTWGCI
Trigger: GATGCAACCCCAAGTGTTCTCCTGGGTTTGATGGCAATGACAGTAACCTGGAAAGAATATACAGGTTAGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647223.1
CDS CAA 72 bp CATCCTAACCTGTATATTCTTTCCAGGTTACTGTCATaGCCATCAAACCCAGGAGAACACTTGGGGTTGCAT +
Preference number: 6 (lower is better)
Translates to: HPNLYILSRLLS*PSNPGEHLGLH
Trigger: ATGCAACCCCAAGTGTTCTCCTGGGTTTGATGGCAATGACAGTAACCTGGAAAGAATATACAGGTTAGGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647223.1
CDS TCA 72 bp TGCCTAAATTGTTTATGCAAACAATACGGCTTATGCTaGACACCTGCCTTCCTTTTGGGAATCTGGAAGCTG +
Preference number: 6 (lower is better)
Translates to: CLNCLCKQYGLC*TPAFLLGIWKL
Trigger: CAGCTTCCAGATTCCCAAAAGGAAGGCAGGTGTTCAGCATAAGCCGTATTGTTTGCATAAACAATTTAGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644168.1
CDS TCA 72 bp CTTTTATCTGAAAAACTCACTAGGACTAGAGACCTGTaGGACCTTAGATTGAGCACTGCTGATGAGCTGGAA +
Preference number: 6 (lower is better)
Translates to: LLSEKLTRTRDL*DLRLSTADELE
Trigger: TTCCAGCTCATCAGCAGTGCTCAATCTAAGGTCTCACAGGTCTCTAGTCCTAGTGAGTTTTTCAGATAAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647223.1
CDS GCA 72 bp TTCACTACCTCATCATTCGATGGGATGGGTATCCAATaGAAAGAACTGTTAGAAACGAGAGCCTTGGTTTTC +
Preference number: 6 (lower is better)
Translates to: FTTSSFDGMGIQ*KELLETRALVF
Trigger: GAAAACCAAGGCTCTCGTTTCTAACAGTTCTTTGCATTGGATACCCATCCCATCGAATGATGAGGTAGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
ENST00000647223.1
CDS CCA 72 bp TTCTGGTTTGGGCTGTTTCACTACCTCATCATTCGATaGGATGGGTATCCAATGCAAAGAACTGTTAGAAAC +
Preference number: 6 (lower is better)
Translates to: FWFGLFHYLIIR*DGYPMQRTVRN
Trigger: GTTTCTAACAGTTCTTTGCATTGGATACCCATCCCATCGAATGATGAGGTAGTGAAACAGCCCAAACCAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
ENST00000647223.1
CDS CCA 72 bp TGGGAGTTATCTCACACCTCAAAACTACAAAGAGTGTaGATGAGAATACTGGCAGTTGGAGACAAGAAGAAG +
Preference number: 6 (lower is better)
Translates to: WELSHTSKLQRV*MRILAVGDKKK
Trigger: CTTCTTCTTGTCTCCAACTGCCAGTATTCTCATCCACACTCTTTGTAGTTTTGAGGTGTGAGATAACTCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644060.1
CDS CAA 72 bp TCATTTGACCTGTATATTCTTTCCAGGTTACTGTCATaGCCATCAAACCCAGGAGAACACTTGGGGTTGCAT +
Preference number: 6 (lower is better)
Translates to: SFDLYILSRLLS*PSNPGEHLGLH
Trigger: ATGCAACCCCAAGTGTTCTCCTGGGTTTGATGGCAATGACAGTAACCTGGAAAGAATATACAGGTCAAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553345.5
CDS CAA 72 bp TTTACTCTTAGAAAGGCCTACTTAAAAGAACAGCCCTaGGCTGACATCTGGGAACTTAGATTTCAGGAGGGT +
Preference number: 6 (lower is better)
Translates to: FTLRKAYLKEQP*ADIWELRFQEG
Trigger: ACCCTCCTGAAATCTAAGTTCCCAGATGTCAGCCAAGGGCTGTTCTTTTAAGTAGGCCTTTCTAAGAGTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644168.1
CDS TCA 72 bp TTAGTATACTATAGAAAAATCTGCAGAAGCCTTCTGTaGATGGGCTGGAGAGGGATGATCTCCATGCAGAAA +
Preference number: 6 (lower is better)
Translates to: LVYYRKICRSLL*MGWRGMISMQK
Trigger: TTTCTGCATGGAGATCATCCCTCTCCAGCCCATTCACAGAAGGCTTCTGCAGATTTTTCTATAGTATACTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000553345.5
ENST00000647223.1
CDS CAA 90 bp GATGGGATGGGTATCCAATGCAAAGAACTGTTAGAAACGAGAGCCTaGGTTTTCAAGTTTTCTTGTCTAGTATCACTTTCCCTCATAGGA +
Preference number: 6 (lower is better)
Translates to: DGMGIQCKELLETRA*VFKFSCLVSLSLIG
Trigger: TCCTATGAGGGAAAGTGATACTAGACAAGAAAACTTGAAAACCAAGGCTCTCGTTTCTAACAGTTCTTTGCATTGGATACCCATCCCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
ENST00000647223.1
CDS GCA 72 bp TTCCCAACCACCCTAACTGATATGAGTTGTTCACTGTaGCTAAATTGTTTATGCAAACAATACGGCTTATGC +
Preference number: 6 (lower is better)
Translates to: FPTTLTDMSCSL*LNCLCKQYGLC
Trigger: GCATAAGCCGTATTGTTTGCATAAACAATTTAGGCACAGTGAACAACTCATATCAGTTAGGGTGGTTGGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644168.1
CDS CCA 72 bp CTCAGAATTAAACTCTACCCATTCCCAAGAAGAACTTaGGAGTTATCTCACACCTCAAAACTACAAAGAGTG +
Preference number: 6 (lower is better)
Translates to: LRIKLYPFPRRT*ELSHTSKLQRV
Trigger: CACTCTTTGTAGTTTTGAGGTGTGAGATAACTCCCAAGTTCTTCTTGGGAATGGGTAGAGTTTAATTCTGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644060.1
CDS CAA 72 bp GGTATCCAATGCAAAGAACTGTTAGAAACGAGAGCCTaGGTTTTCAAGTTTTCTTGTCTAGTATCACTTTCC +
Preference number: 6 (lower is better)
Translates to: GIQCKELLETRA*VFKFSCLVSLS
Trigger: GGAAAGTGATACTAGACAAGAAAACTTGAAAACCAAGGCTCTCGTTTCTAACAGTTCTTTGCATTGGATACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
ENST00000647223.1
CDS CCA 72 bp TACTTTGTCTTTGTCCAACATACATTCTTTGCAAAGTaGATTCAGTTCTCCTCAAAATACCAATTTCCAGTC +
Preference number: 6 (lower is better)
Translates to: YFVFVQHTFFAK*IQFSSKYQFPV
Trigger: GACTGGAAATTGGTATTTTGAGGAGAACTGAATCCACTTTGCAAAGAATGTATGTTGGACAAAGACAAAGTA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375689.5
ENST00000649901.1