RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ASXL1 (Homo sapiens)

Ensembl gene IDs: ENSG00000171456

Ensembl transcript IDs: ENST00000306058.9, ENST00000375687.10, ENST00000375689.5, ENST00000470145.3, ENST00000497249.6, ENST00000542461.5, ENST00000553345.5, ENST00000555343.2, ENST00000555564.2, ENST00000613218.4, ENST00000619344.4, ENST00000620121.4, ENST00000642676.1, ENST00000643168.1, ENST00000644060.1, ENST00000644168.1, ENST00000644587.1, ENST00000644615.1, ENST00000645035.1, ENST00000645337.1, ENST00000645688.1, ENST00000646367.1, ENST00000646985.1, ENST00000647223.1, ENST00000649901.1, ENST00000651418.1

Found 1845 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGGCAGGCTGACTGTGGCTCTGCAGGCTGCAGCAGGTCCAGCCGGTaGCCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATC +
Preference number: 1 (lower is better)
Translates to: GQADCGSAGCSRSSR*PNRASGNLAGHKSI
Trigger: GATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACCGGCTGGACCTGCTGCAGCCTGCAGAGCCACAGTCAGCCTGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
3UTR CCA 90 bp GCTGCAGCAGGTCCAGCCGGTGACCCAACAGGGCATCGGGCAACCTaGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCAC +
Preference number: 1 (lower is better)
Translates to: AAAGPAGDPTGHRAT*QVTSQSFHPHVEQH
Trigger: GTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACCGGCTGGACCTGCTGCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
3UTR TCA 90 bp AAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGGTATTGCTGTaGCAGGTGGTGACCCTGGAGCCAGATCTGGAAGGCCTTCCTGGG +
Preference number: 1 (lower is better)
Translates to: KEPHSPRRAWSQVLL*QVVTLEPDLEGLPG
Trigger: CCCAGGAAGGCCTTCCAGATCTGGCTCCAGGGTCACCACCTGTCACAGCAATACCTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
3UTR CCA 90 bp CCACATCAGGCTCTGTCTTGCAGGAGAGCTCAGGCTGGCTGGCCTTaGGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGAC +
Preference number: 1 (lower is better)
Translates to: PHQALSCRRAQAGWP*AAQWVIPRKPLQQD
Trigger: GTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCCCAAGGCCAGCCAGCCTGAGCTCTCCTGCAAGACAGAGCCTGATGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
3UTR GCA 90 bp CAGGTGGTGACCCTGGAGCCAGATCTGGAAGGCCTTCCTGGGGGCTaGCCAGGGAACTCACCCATGAATCCAGAAGCACTTAACACTGGT +
Preference number: 1 (lower is better)
Translates to: QVVTLEPDLEGLPGG*PGNSPMNPEALNTG
Trigger: ACCAGTGTTAAGTGCTTCTGGATTCATGGGTGAGTTCCCTGGGCAGCCCCCAGGAAGGCCTTCCAGATCTGGCTCCAGGGTCACCACCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
3UTR CCA 90 bp ACATCAGCCGTGTCCTCTGGCTCCTCTCCCTCCACTGTAGCTGGATaGCGAGACCACTGCAGGGCATCCTTCTGTAATCCATCCCAGTGC +
Preference number: 1 (lower is better)
Translates to: TSAVSSGSSPSTVAG*RDHCRASFCNPSQC
Trigger: GCACTGGGATGGATTACAGAAGGATGCCCTGCAGTGGTCTCGCCATCCAGCTACAGTGGAGGGAGAGGAGCCAGAGGACACGGCTGATGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644587.1
3UTR CCA 90 bp GACTCAACTGTGACCCTGAGGTCAGCAGGTGCACCAGCCCCCTGGTaGGCAATGCCAGGAGTTACTTTAACCCTGTGCTGGCTTCTTTCC +
Preference number: 1 (lower is better)
Translates to: DSTVTLRSAGAPAPW*AMPGVTLTLCWLLS
Trigger: GGAAAGAAGCCAGCACAGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGACCTCAGGGTCACAGTTGAGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
3UTR GCA 90 bp GCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGTaGTGGCTTCTTTCCTGGCCATCAACTCCCCAAAGTAGCAGAAGA +
Preference number: 1 (lower is better)
Translates to: APAPWWAMPGVTLTL*WLLSWPSTPQSSRR
Trigger: TCTTCTGCTACTTTGGGGAGTTGATGGCCAGGAAAGAAGCCAGCACAGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
3UTR CCA 90 bp AATGACTCAACTGTGACCCTGAGGTCAGCAGGTGCACCAGCCCCCTaGTGGGCAATGCCAGGAGTTACTTTAACCCTGTGCTGGCTTCTT +
Preference number: 1 (lower is better)
Translates to: NDSTVTLRSAGAPAP*WAMPGVTLTLCWLL
Trigger: AAGAAGCCAGCACAGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGACCTCAGGGTCACAGTTGAGTCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
3UTR TCA 90 bp TTCAGCAACAGAACCAAGGTCAAACTTGCTCCGTCAACTGGCAAATaGCTCAACTGTGACCCTGAGGTCAGCAGGTGCACCAGCCCCCTG +
Preference number: 1 (lower is better)
Translates to: FSNRTKVKLAPSTGK*LNCDPEVSRCTSPL
Trigger: CAGGGGGCTGGTGCACCTGCTGACCTCAGGGTCACAGTTGAGTCATTTGCCAGTTGACGGAGCAAGTTTGACCTTGGTTCTGTTGCTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR TCA 90 bp TCTCTGGGCAGCCTCATGGACCAGATCAGTGTCAAACTGTACCCTTaGGTGTCCCCAAAGGTTCCAGCAGAGGGAAGAAGAGGACTGGAC +
Preference number: 1 (lower is better)
Translates to: SLGSLMDQISVKLYP*VSPKVPAEGRRGLD
Trigger: GTCCAGTCCTCTTCTTCCCTCTGCTGGAACCTTTGGGGACACTCAAGGGTACAGTTTGACACTGATCTGGTCCATGAGGCTGCCCAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR CCA 90 bp CCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGTGCTaGCTTCTTTCCTGGCCATCAACTCCCCAAAGTAGCAGAAGAAAA +
Preference number: 1 (lower is better)
Translates to: PAPWWAMPGVTLTLC*LLSWPSTPQSSRRK
Trigger: TTTTCTTCTGCTACTTTGGGGAGTTGATGGCCAGGAAAGAAGCCAGCACAGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
3UTR CCA 90 bp TGGGCAATGCCAGGAGTTACTTTAACCCTGTGCTGGCTTCTTTCCTaGCCATCAACTCCCCAAAGTAGCAGAAGAAAAGATGGCAGGGAG +
Preference number: 1 (lower is better)
Translates to: WAMPGVTLTLCWLLS*PSTPQSSRRKDGRE
Trigger: CTCCCTGCCATCTTTTCTTCTGCTACTTTGGGGAGTTGATGGCCAGGAAAGAAGCCAGCACAGGGTTAAAGTAACTCCTGGCATTGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
3UTR TCA 90 bp GGAGGATGTCAAGCAGAGGAATTCACCTGCAAACATCTGGACGGCTaGCTCACAAGGTCTACAGATGGCATTTTCATAGGAAAGACAACC +
Preference number: 1 (lower is better)
Translates to: GGCQAEEFTCKHLDG*LTRSTDGIFIGKTT
Trigger: GGTTGTCTTTCCTATGAAAATGCCATCTGTAGACCTTGTGAGTCAGCCGTCCAGATGTTTGCAGGTGAATTCCTCTGCTTGACATCCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR GCA 90 bp TCCTGTGGGTTAGTGGATCACACTGAGACAGAAAAGTTCCAAATTTaGTTCAGCAACAGAACCAAGGTCAAACTTGCTCCGTCAACTGGC +
Preference number: 1 (lower is better)
Translates to: SCGLVDHTETEKFQI*FSNRTKVKLAPSTG
Trigger: GCCAGTTGACGGAGCAAGTTTGACCTTGGTTCTGTTGCTGAAGCAAATTTGGAACTTTTCTGTCTCAGTGTGATCCACTAACCCACAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR CCA 90 bp TATTGTTCCAATACCACAAGAGACATACAGAAGCAGTGCTTTCTCTaGGCAGCCTCATGGACCAGATCAGTGTCAAACTGTACCCTTGAG +
Preference number: 1 (lower is better)
Translates to: YCSNTTRDIQKQCFL*AASWTRSVSNCTLE
Trigger: CTCAAGGGTACAGTTTGACACTGATCTGGTCCATGAGGCTGCCCAGAGAAAGCACTGCTTCTGTATGTCTCTTGTGGTATTGGAACAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR CCA 90 bp CCCCTGTTCCCGGTCTTTGGTAAACAGACGCTTAAGTTGACAACTTaGACTTGGCCAATACTGCATTCTAAATCACCACATCATTCCCAA +
Preference number: 1 (lower is better)
Translates to: PLFPVFGKQTLKLTT*TWPILHSKSPHHSQ
Trigger: TTGGGAATGATGTGGTGATTTAGAATGCAGTATTGGCCAAGTCCAAGTTGTCAACTTAAGCGTCTGTTTACCAAAGACCGGGAACAGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
3UTR GCA 90 bp CCTGGGATTGGAAAGAGGTCGACTCTGAGATTCTGTAGAACAGGATaGGTTCGAAGATGTTTCATCAAGAGATACATCGTTTTCACCACT +
Preference number: 1 (lower is better)
Translates to: PGIGKRSTLRFCRTG*VRRCFIKRYIVFTT
Trigger: AGTGGTGAAAACGATGTATCTCTTGATGAAACATCTTCGAACGCATCCTGTTCTACAGAATCTCAGAGTCGACCTCTTTCCAATCCCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644587.1
3UTR CCA 90 bp TTCCCGGTCTTTGGTAAACAGACGCTTAAGTTGACAACTTGGACTTaGCCAATACTGCATTCTAAATCACCACATCATTCCCAACTTGTC +
Preference number: 1 (lower is better)
Translates to: FPVFGKQTLKLTTWT*PILHSKSPHHSQLV
Trigger: GACAAGTTGGGAATGATGTGGTGATTTAGAATGCAGTATTGGCCAAGTCCAAGTTGTCAACTTAAGCGTCTGTTTACCAAAGACCGGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
3UTR GCA 90 bp GTGACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTaGTCCTGCCTAAAGAGTATTATATCAATGATATTCTGTATACAG +
Preference number: 1 (lower is better)
Translates to: VTEGFSSVNFGGRQE*SCLKSIISMIFCIQ
Trigger: CTGTATACAGAATATCATTGATATAATACTCTTTAGGCAGGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGTCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
3UTR-3UTR CCA 90 bp GTGACAGGTGGTGACCCTGGAGCCAGATCTGGAAGGCCTTCCTGGGGGCTGCCCAGAGCTCAGGCTGGCTaGCCTTGGGCAGCCCAATGG +
Preference number: 2 (lower is better)
Translates to: VTGGDPGARSGRPSWGLPRAQAG*PWAAQW
Trigger: CCATTGGGCTGCCCAAGGCCAGCCAGCCTGAGCTCT...GGGCAGCCCCCAGGAAGGCCTTCCAGATCTGGCTCCAGGGTCACCACCTGTCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR-3UTR CCA 90 bp CAGAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTAAGAGCTCAGGCTGGCTaGCCTTGGGCAGCCCAATGG +
Preference number: 2 (lower is better)
Translates to: QREEEDWTCLGPCSRSLVRAQAG*PWAAQW
Trigger: CCATTGGGCTGCCCAAGGCCAGCCAGCCTGAGCTCT...TACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR-3UTR GCA 90 bp CCAGCAGAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTCGCAACCCCACTCCGTaGCACATCAGGCTCTGTCTT +
Preference number: 2 (lower is better)
Translates to: PAEGRRGLDMFGPLFPVFRNPTP*HIRLCL
Trigger: AAGACAGAGCCTGATGTGGCACGGAGTGGGGTTGCG...AAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTCTGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR-3UTR CCA 90 bp AGATTCCACGTGGGCCCCGTTTACCTTCAGAGGAGTCAGGACAACTCGAGGCAGTCCCTCCACTGTAGCTaGATGGCGAGACCACTGCAG +
Preference number: 2 (lower is better)
Translates to: RFHVGPVYLQRSQDNSRQSLHCS*MARPLQ
Trigger: CTGCAGTGGTCTCGCCATCCAGCTACAGTGGAGGGA...CTGCCTCGAGTTGTCCTGACTCCTCTGAAGGTAAACGGGGCCCACGTGGAATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644587.1
3UTR-3UTR GCA 90 bp AAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGGTATTGCTGTGACAGGTCATCAGGCTCTGTCTTaGAGGAGAGCTCAGGCTGGC +
Preference number: 2 (lower is better)
Translates to: KGASQSQESMVPGIAVTGHQALS*RRAQAG
Trigger: GCCAGCCTGAGCTCTCCTGCAAGACAGAGCCTGATG...ACCTGTCACAGCAATACCTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR-3UTR GCA 90 bp AGGTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCGGGGGAAGGCAAGAGTaGTCCTGCCTAAAGAGTATT +
Preference number: 2 (lower is better)
Translates to: RSAGAPAPWWAMPGVTLTGGRQE*SCLKSI
Trigger: AATACTCTTTAGGCAGGAGCACTCTTGCCTTCCCCC...GGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
3UTR-3UTR CCA 90 bp CAGAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTACCTTGGGCAGCCCAATaGGTTATACCCAGGAAACCC +
Preference number: 2 (lower is better)
Translates to: QREEEDWTCLGPCSRSLVPWAAQ*VIPRKP
Trigger: GGGTTTCCTGGGTATAACCCATTGGGCTGCCCAAGG...TACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR-3UTR CCA 90 bp GAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTAAACAGGCTGGCTGGCCTTaGGCAGCCCAATGGGTTATA +
Preference number: 2 (lower is better)
Translates to: EGRRGLDMFGPLFPVFGKQAGWP*AAQWVI
Trigger: TATAACCCATTGGGCTGCCCAAGGCCAGCCAGCCTG...TTTACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR-3UTR CCA 90 bp ATGTCAAAAGTACGTCAAAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGGCACCAGCCCCCTGGTaGGCAATGCCAGGAGTTACT +
Preference number: 2 (lower is better)
Translates to: MSKVRQKEPHSPRRAWSQAPAPW*AMPGVT
Trigger: AGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGC...CTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTTTGACGTACTTTTGACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR-3UTR CCA 90 bp GTCAAAAGTACGTCAAAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGGTGATGCGTTTGCTCGGTaGCATGTGGGCAGGCTGACT +
Preference number: 2 (lower is better)
Translates to: VKSTSKGASQSQESMVPGDAFAR*HVGRLT
Trigger: AGTCAGCCTGCCCACATGCCACCGAGCAAACGCATC...ACCTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTTTGACGTACTTTTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
3UTR-3UTR CCA 90 bp TTCACCACTCACAGTGCTGGCTTCATTAGACCCACAGCTCTCCACATCAGCCGTTCCACTGTAGCTGGATaGCGAGACCACTGCAGGGCA +
Preference number: 2 (lower is better)
Translates to: FTTHSAGFIRPTALHISRSTVAG*RDHCRA
Trigger: TGCCCTGCAGTGGTCTCGCCATCCAGCTACAGTGGA...ACGGCTGATGTGGAGAGCTGTGGGTCTAATGAAGCCAGCACTGTGAGTGGTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644587.1
3UTR-3UTR TCA 90 bp GAGAGGCAGGAGCAGGCATGGCTTTGTTTCTTCCCAAACCTGCCTGATGTCAAATCCCAGGTATTGCTGTaGCAGGTGGTGACCCTGGAG +
Preference number: 2 (lower is better)
Translates to: ERQEQAWLCFFPNLPDVKSQVLL*QVVTLE
Trigger: CTCCAGGGTCACCACCTGTCACAGCAATACCTGGGA...TTTGACATCAGGCAGGTTTGGGAAGAAACAAAGCCATGCCTGCTCCTGCCTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
3UTR-3UTR GCA 90 bp AAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGGTATTGCTGTGACAGGTTTTCACATACACAGGTaGGTGGAGATGCCCACTCCC +
Preference number: 2 (lower is better)
Translates to: KGASQSQESMVPGIAVTGFHIHR*VEMPTP
Trigger: GGGAGTGGGCATCTCCACGCACCTGTGTATGTGAAA...ACCTGTCACAGCAATACCTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR-3UTR CCA 90 bp GGGGGTAGTGGAAGACTGGCATTTCTACTTAGTTCAGGTAGGTTAACTCCCTTGAGAGCTCAGGCTGGCTaGCCTTGGGCAGCCCAATGG +
Preference number: 2 (lower is better)
Translates to: GGSGRLAFLLSSGRLTPLRAQAG*PWAAQW
Trigger: CCATTGGGCTGCCCAAGGCCAGCCAGCCTGAGCTCT...CAAGGGAGTTAACCTACCTGAACTAAGTAGAAATGCCAGTCTTCCACTACCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
3UTR-3UTR CCA 90 bp CCAGCAGAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTAGGCAGGAGCAGGCATaGCTTTGTTTCTTCCCAAAC +
Preference number: 2 (lower is better)
Translates to: PAEGRRGLDMFGPLFPVFRQEQA*LCFFPN
Trigger: GTTTGGGAAGAAACAAAGCCATGCCTGCTCCTGCCT...AAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTCTGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
3UTR-3UTR CCA 90 bp GCCCCGTTTACCTTCAGAGGAGTCAGGACAACTCGAGGCAGCATCACCCCAGTCTTTGTGAAGCTGTGGTaGGAAGATCACTTGAGGCCA +
Preference number: 2 (lower is better)
Translates to: APFTFRGVRTTRGSITPVFVKLW*EDHLRP
Trigger: TGGCCTCAAGTGATCTTCCCACCACAGCTTCACAAA...GACTGGGGTGATGCTGCCTCGAGTTGTCCTGACTCCTCTGAAGGTAAACGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644587.1
3UTR-3UTR CCA 90 bp GCCCCGTTTACCTTCAGAGGAGTCAGGACAACTCGAGGCAGCATCACCCCAGTCTGCTTTGTGAAGCTGTaGTGGGAAGATCACTTGAGG +
Preference number: 2 (lower is better)
Translates to: APFTFRGVRTTRGSITPVCFVKL*WEDHLR
Trigger: CCTCAAGTGATCTTCCCACCACAGCTTCACAAAGCA...GACTGGGGTGATGCTGCCTCGAGTTGTCCTGACTCCTCTGAAGGTAAACGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644587.1
3UTR CAA 90 bp TTCTCTGGGCAGCCTCATGGACCAGATCAGTGTCAAACTGTACCCTaGAGTGTCCCCAAAGGTTCCAGCAGAGGGAAGAAGAGGACTGGA +
Preference number: 2 (lower is better)
Translates to: FSGQPHGPDQCQTVP*SVPKGSSRGKKRTG
Trigger: TCCAGTCCTCTTCTTCCCTCTGCTGGAACCTTTGGGGACACTCAAGGGTACAGTTTGACACTGATCTGGTCCATGAGGCTGCCCAGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR-3UTR TCA 90 bp CTGATGCAGATTCCACGTGGGCCCCGTTTACCTTCAGAGGAGTCAGGACAACTCTTGTTTGTTCGCCTGTaGGGAAGCTCTGTAGCTGTC +
Preference number: 2 (lower is better)
Translates to: LMQIPRGPRLPSEESGQLLFVRL*GSSVAV
Trigger: GACAGCTACAGAGCTTCCTCACAGGCGAACAAACAA...GAGTTGTCCTGACTCCTCTGAAGGTAAACGGGGCCCACGTGGAATCTGCATCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644587.1
3UTR-3UTR GCA 90 bp CAGAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTAGGGGGAAGGCAAGAGTaGTCCTGCCTAAAGAGTATT +
Preference number: 2 (lower is better)
Translates to: QREEEDWTCLGPCSRSLVGGRQE*SCLKSI
Trigger: AATACTCTTTAGGCAGGAGCACTCTTGCCTTCCCCC...TACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR-3UTR GCA 90 bp CTTGGTGGAGAATGCAACCTTCTTGCTTCAGTTTCAAGTCCCTCTGGGAGTCAGCATCAGGCTCTGTCTTaGAGGAGAGCTCAGGCTGGC +
Preference number: 2 (lower is better)
Translates to: LGGECNLLASVSSPSGSQHQALS*RRAQAG
Trigger: GCCAGCCTGAGCTCTCCTGCAAGACAGAGCCTGATG...CTGACTCCCAGAGGGACTTGAAACTGAAGCAAGAAGGTTGCATTCTCCACCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
3UTR-3UTR GCA 90 bp AAAAGTACGTCAAAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGGTATTCGCAACCCCACTCCGTaGCACATCAGGCTCTGTCTT +
Preference number: 2 (lower is better)
Translates to: KSTSKGASQSQESMVPGIRNPTP*HIRLCL
Trigger: AAGACAGAGCCTGATGTGGCACGGAGTGGGGTTGCG...AATACCTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTTTGACGTACTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR-3UTR GCA 90 bp GCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGTGCAGAATGCAACCTTCTTaGTTCAGTTTCAAGTCCCTC +
Preference number: 2 (lower is better)
Translates to: AGAPAPWWAMPGVTLTLCRMQPS*FSFKSL
Trigger: GAGGGACTTGAAACTGAAGCAAGAAGGTTGCATTCT...GCACAGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
3UTR-3UTR CCA 90 bp TCAATCATTTCACCCTCACGTCGAGCAGCACAGCACTCAGTGGCTCTGACAACACCTTGGGCAGCCCAATaGGTTATACCCAGGAAACCC +
Preference number: 2 (lower is better)
Translates to: SIISPSRRAAQHSVALTTPWAAQ*VIPRKP
Trigger: GGGTTTCCTGGGTATAACCCATTGGGCTGCCCAAGG...TGTTGTCAGAGCCACTGAGTGCTGTGCTGCTCGACGTGAGGGTGAAATGATTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR-3UTR CCA 90 bp GGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACTGCTGGCTTCTTTCCTaGCCATCAACTCCCCAAAGT +
Preference number: 2 (lower is better)
Translates to: GDPTGHRATWQVTSQSFHCWLLS*PSTPQS
Trigger: ACTTTGGGGAGTTGATGGCCAGGAAAGAAGCCAGCA...GTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR-3UTR CCA 90 bp GTAGCTGTCCCTGGGATTGGAAAGAGGTCGACTCTGAGATTCTGTAGAACAGGAATCAGCCGTGTCCTCTaGCTCCTCTCCCTCCACTGT +
Preference number: 2 (lower is better)
Translates to: VAVPGIGKRSTLRFCRTGISRVL*LLSLHC
Trigger: ACAGTGGAGGGAGAGGAGCCAGAGGACACGGCTGAT...TCCTGTTCTACAGAATCTCAGAGTCGACCTCTTTCCAATCCCAGGGACAGCTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644587.1
3UTR-3UTR TCA 90 bp AAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGGTATTGCTGTGACAGGTAAACATCTGGACGGCTaGCTCACAAGGTCTACAGAT +
Preference number: 2 (lower is better)
Translates to: KGASQSQESMVPGIAVTGKHLDG*LTRSTD
Trigger: ATCTGTAGACCTTGTGAGTCAGCCGTCCAGATGTTT...ACCTGTCACAGCAATACCTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR-3UTR GCA 90 bp AGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTAAACGGGGGAAGGCAAGAGTaGTCCTGCCTAAAGAGTATT +
Preference number: 2 (lower is better)
Translates to: REEEDWTCLGPCSRSLVNGGRQE*SCLKSI
Trigger: AATACTCTTTAGGCAGGAGCACTCTTGCCTTCCCCC...GTTTACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR-3UTR GCA 90 bp GGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACAGCACTCAGTGGGGGAAGGCAAGAGTaGTCCTGCCTAAAGAGTATT +
Preference number: 2 (lower is better)
Translates to: GRSQVNHFTLTSSSTALSGGRQE*SCLKSI
Trigger: AATACTCTTTAGGCAGGAGCACTCTTGCCTTCCCCC...ACTGAGTGCTGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR-3UTR GCA 90 bp GGGGGTAGTGGAAGACTGGCATTTCTACTTAGTTCAGGTAGGTTAACTCCCTTGCGCAACCCCACTCCGTaGCACATCAGGCTCTGTCTT +
Preference number: 2 (lower is better)
Translates to: GGSGRLAFLLSSGRLTPLRNPTP*HIRLCL
Trigger: AAGACAGAGCCTGATGTGGCACGGAGTGGGGTTGCG...CAAGGGAGTTAACCTACCTGAACTAAGTAGAAATGCCAGTCTTCCACTACCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
3UTR-3UTR GCA 90 bp GAGAGGCAGGAGCAGGCATGGCTTTGTTTCTTCCCAAACCTGCCTGATGTCAAAAAAGCAAGATGCGTTTaGTCGGTGGCATGTGGGCAG +
Preference number: 2 (lower is better)
Translates to: ERQEQAWLCFFPNLPDVKKARCV*SVACGQ
Trigger: CTGCCCACATGCCACCGAGCAAACGCATCTTGCTTT...TTTGACATCAGGCAGGTTTGGGAAGAAACAAAGCCATGCCTGCTCCTGCCTCTC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
3UTR-3UTR CCA 90 bp GTCAAAAGTACGTCAAAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGGTTGCTGGCTTCTTTCCTaGCCATCAACTCCCCAAAGT +
Preference number: 2 (lower is better)
Translates to: VKSTSKGASQSQESMVPGCWLLS*PSTPQS
Trigger: ACTTTGGGGAGTTGATGGCCAGGAAAGAAGCCAGCA...ACCTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTTTGACGTACTTTTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR-3UTR TCA 90 bp GTCAAAAGTACGTCAAAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGGTGTAGGAGGAGAGATGTaGAAAGCAAGATGCGTTTGC +
Preference number: 2 (lower is better)
Translates to: VKSTSKGASQSQESMVPGVGGEM*KARCVC
Trigger: GCAAACGCATCTTGCTTTTCACATCTCTCCTCCTAC...ACCTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTTTGACGTACTTTTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
3UTR-3UTR GCA 90 bp TCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGAGGCAAGAGTGCTCCTaGCTAAAGAGTATTATATCA +
Preference number: 2 (lower is better)
Translates to: SAGAPAPWWAMPGVTLTLRQECS*LKSIIS
Trigger: TGATATAATACTCTTTAGGCAGGAGCACTCTTGCCT...CAGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
3UTR-3UTR GCA 90 bp CTGGCATTTCTACTTAGTTCAGGTAGGTTAACTCCCTTGGTGGAGAATGCAACCCATCAGGCTCTGTCTTaGAGGAGAGCTCAGGCTGGC +
Preference number: 2 (lower is better)
Translates to: LAFLLSSGRLTPLVENATHQALS*RRAQAG
Trigger: GCCAGCCTGAGCTCTCCTGCAAGACAGAGCCTGATG...GGTTGCATTCTCCACCAAGGGAGTTAACCTACCTGAACTAAGTAGAAATGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
3UTR-3UTR GCA 90 bp GCCGGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTAGAATGCAACCTTCTTaGTTCAGTTTCAAGTCCCTC +
Preference number: 2 (lower is better)
Translates to: AGDPTGHRATWQVTSQSFRMQPS*FSFKSL
Trigger: GAGGGACTTGAAACTGAAGCAAGAAGGTTGCATTCT...AAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACCGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR-3UTR GCA 90 bp AGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTAAACGTTACTTTAACCCTGTaGTGGCTTCTTTCCTGGCCA +
Preference number: 2 (lower is better)
Translates to: REEEDWTCLGPCSRSLVNVTLTL*WLLSWP
Trigger: TGGCCAGGAAAGAAGCCAGCACAGGGTTAAAGTAAC...GTTTACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR-3UTR GCA 90 bp GAGATGCCCACTCCCATAGGGTCCAAAGTGACAGGGAGGATGTCAAGCAGAGGAAACCAAGGTCAAACTTaGTCCGTCAACTGGCAAATG +
Preference number: 2 (lower is better)
Translates to: EMPTPIGSKVTGRMSSRGNQGQT*SVNWQM
Trigger: CATTTGCCAGTTGACGGAGCAAGTTTGACCTTGGTT...TCCTCTGCTTGACATCCTCCCTGTCACTTTGGACCCTATGGGAGTGGGCATCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR-3UTR GCA 90 bp CAGAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTAAACCAAGGTCAAACTTaGTCCGTCAACTGGCAAATG +
Preference number: 2 (lower is better)
Translates to: QREEEDWTCLGPCSRSLVNQGQT*SVNWQM
Trigger: CATTTGCCAGTTGACGGAGCAAGTTTGACCTTGGTT...TACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR-3UTR GCA 90 bp GTCCCTGGGATTGGAAAGAGGTCGACTCTGAGATTCTGTAGAACAGGATGCGTTGGATGGCGAGACCACTaGAGGGCATCCTTCTGTAAT +
Preference number: 2 (lower is better)
Translates to: VPGIGKRSTLRFCRTGCVGWRDH*RASFCN
Trigger: ATTACAGAAGGATGCCCTGCAGTGGTCTCGCCATCC...AACGCATCCTGTTCTACAGAATCTCAGAGTCGACCTCTTTCCAATCCCAGGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644587.1
3UTR-3UTR CCA 90 bp GGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACAGGGGTAGTGGAAGACTaGCATTTCTACTTAGTTCAG +
Preference number: 2 (lower is better)
Translates to: GQPGRSQVNHFTLTSSSTGVVED*HFYLVQ
Trigger: CTGAACTAAGTAGAAATGCCAGTCTTCCACTACCCC...TGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR-3UTR CCA 90 bp ATGTCAAAAGTACGTCAAAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGTCACCTGCAAACATCTaGACGGCTGACTCACAAGGT +
Preference number: 2 (lower is better)
Translates to: MSKVRQKEPHSPRRAWSQSPANI*TADSQG
Trigger: ACCTTGTGAGTCAGCCGTCCAGATGTTTGCAGGTGA...CTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTTTGACGTACTTTTGACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR-3UTR TCA 90 bp GCCGGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTGTTAGTGGATCACACTaGGACAGAAAAGTTCCAAAT +
Preference number: 2 (lower is better)
Translates to: AGDPTGHRATWQVTSQSFVSGSH*DRKVPN
Trigger: ATTTGGAACTTTTCTGTCTCAGTGTGATCCACTAAC...AAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACCGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR-3UTR TCA 90 bp GAGAGGCAGGAGCAGGCATGGCTTTGTTTCTTCCCAAACCTGCCTGATGTCAAAGTAGGAGGAGAGATGTaGAAAGCAAGATGCGTTTGC +
Preference number: 2 (lower is better)
Translates to: ERQEQAWLCFFPNLPDVKVGGEM*KARCVC
Trigger: GCAAACGCATCTTGCTTTTCACATCTCTCCTCCTAC...TTTGACATCAGGCAGGTTTGGGAAGAAACAAAGCCATGCCTGCTCCTGCCTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
3UTR-3UTR GCA 90 bp TGTAGGAGGAGAGATGTGAAAAGCAAGATGCGTTTGCTCGGTGGCATGTGGGCAGTTACTTTAACCCTGTaGTGGCTTCTTTCCTGGCCA +
Preference number: 2 (lower is better)
Translates to: CRRRDVKSKMRLLGGMWAVTLTL*WLLSWP
Trigger: TGGCCAGGAAAGAAGCCAGCACAGGGTTAAAGTAAC...TGCCCACATGCCACCGAGCAAACGCATCTTGCTTTTCACATCTCTCCTCCTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR-3UTR CCA 90 bp CTGGCATTTCTACTTAGTTCAGGTAGGTTAACTCCCTTGGTGGAGAATGCAACCCCTTGGGCAGCCCAATaGGTTATACCCAGGAAACCC +
Preference number: 2 (lower is better)
Translates to: LAFLLSSGRLTPLVENATPWAAQ*VIPRKP
Trigger: GGGTTTCCTGGGTATAACCCATTGGGCTGCCCAAGG...GGTTGCATTCTCCACCAAGGGAGTTAACCTACCTGAACTAAGTAGAAATGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
3UTR-3UTR CCA 90 bp GAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTAAAGGGGTAGTGGAAGACTaGCATTTCTACTTAGTTCAG +
Preference number: 2 (lower is better)
Translates to: EGRRGLDMFGPLFPVFGKGVVED*HFYLVQ
Trigger: CTGAACTAAGTAGAAATGCCAGTCTTCCACTACCCC...TTTACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR-3UTR CCA 90 bp CAGACGCTTAAGTTGACAACTTGGACTTGGCCAATACTGCATTCTAAATCACCAGCACCAGCCCCCTGGTaGGCAATGCCAGGAGTTACT +
Preference number: 2 (lower is better)
Translates to: QTLKLTTWTWPILHSKSPAPAPW*AMPGVT
Trigger: AGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGC...TGGTGATTTAGAATGCAGTATTGGCCAAGTCCAAGTTGTCAACTTAAGCGTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR-3UTR CCA 90 bp TTTGTTTCTTCCCAAACCTGCCTGATGTCAAAAGTACGTCAAAAGGAGCCTCACGATGCGTTTGCTCGGTaGCATGTGGGCAGGCTGACT +
Preference number: 2 (lower is better)
Translates to: FVSSQTCLMSKVRQKEPHDAFAR*HVGRLT
Trigger: AGTCAGCCTGCCCACATGCCACCGAGCAAACGCATC...GTGAGGCTCCTTTTGACGTACTTTTGACATCAGGCAGGTTTGGGAAGAAACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
3UTR-3UTR GCA 90 bp AAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGGTATTGCTGTGACAGGTAGGCAAGAGTGCTCCTaGCTAAAGAGTATTATATCA +
Preference number: 2 (lower is better)
Translates to: KGASQSQESMVPGIAVTGRQECS*LKSIIS
Trigger: TGATATAATACTCTTTAGGCAGGAGCACTCTTGCCT...ACCTGTCACAGCAATACCTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR-3UTR GCA 90 bp AATCACCACATCATTCCCAACTTGTCACTCATGCTTCAGATGACGAAAATGCCACATCAGGCTCTGTCTTaGAGGAGAGCTCAGGCTGGC +
Preference number: 2 (lower is better)
Translates to: NHHIIPNLSLMLQMTKMPHQALS*RRAQAG
Trigger: GCCAGCCTGAGCTCTCCTGCAAGACAGAGCCTGATG...TGGCATTTTCGTCATCTGAAGCATGAGTGACAAGTTGGGAATGATGTGGTGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR-3UTR GCA 90 bp GTCAAAAGTACGTCAAAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGGTAGAATGCAACCTTCTTaGTTCAGTTTCAAGTCCCTC +
Preference number: 2 (lower is better)
Translates to: VKSTSKGASQSQESMVPGRMQPS*FSFKSL
Trigger: GAGGGACTTGAAACTGAAGCAAGAAGGTTGCATTCT...ACCTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTTTGACGTACTTTTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR-3UTR GCA 90 bp ATGTCAAAAGTACGTCAAAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGTCCCTTGGTGGAGAATaGAACCTTCTTGCTTCAGTT +
Preference number: 2 (lower is better)
Translates to: MSKVRQKEPHSPRRAWSQSLGGE*NLLASV
Trigger: AACTGAAGCAAGAAGGTTGCATTCTCCACCAAGGGA...CTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTTTGACGTACTTTTGACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR-3UTR CCA 90 bp GGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCACAAGGTCTACAGATaGCATTTTCATAGGAAAGAC +
Preference number: 2 (lower is better)
Translates to: GDPTGHRATWQVTSQSFHHKVYR*HFHRKD
Trigger: GTCTTTCCTATGAAAATGCCATCTGTAGACCTTGTG...GTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR-3UTR TCA 90 bp GTCAAAAGTACGTCAAAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGGTGTTAGTGGATCACACTaGGACAGAAAAGTTCCAAAT +
Preference number: 2 (lower is better)
Translates to: VKSTSKGASQSQESMVPGVSGSH*DRKVPN
Trigger: ATTTGGAACTTTTCTGTCTCAGTGTGATCCACTAAC...ACCTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTTTGACGTACTTTTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR-3UTR GCA 90 bp CTTTCACATACACAGGTGCGTGGAGATGCCCACTCCCATAGGGTCCAAAGTGACAGGCAAGAGTGCTCCTaGCTAAAGAGTATTATATCA +
Preference number: 2 (lower is better)
Translates to: LSHTQVRGDAHSHRVQSDRQECS*LKSIIS
Trigger: TGATATAATACTCTTTAGGCAGGAGCACTCTTGCCT...GTCACTTTGGACCCTATGGGAGTGGGCATCTCCACGCACCTGTGTATGTGAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR-3UTR GCA 90 bp CAAGGCAAGGGAAAACACACACAGGGGCATCTACTTGCTGGAAACATGTTGGGATCCCTTGGTGGAGAATaGAACCTTCTTGCTTCAGTT +
Preference number: 2 (lower is better)
Translates to: QGKGKHTQGHLLAGNMLGSLGGE*NLLASV
Trigger: AACTGAAGCAAGAAGGTTGCATTCTCCACCAAGGGA...TCCCAACATGTTTCCAGCAAGTAGATGCCCCTGTGTGTGTTTTCCCTTGCCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR-3UTR GCA 90 bp TTTGTTTCTTCCCAAACCTGCCTGATGTCAAAAGTACGTCAAAAGGAGCCTCACAAAGCAAGATGCGTTTaGTCGGTGGCATGTGGGCAG +
Preference number: 2 (lower is better)
Translates to: FVSSQTCLMSKVRQKEPHKARCV*SVACGQ
Trigger: CTGCCCACATGCCACCGAGCAAACGCATCTTGCTTT...GTGAGGCTCCTTTTGACGTACTTTTGACATCAGGCAGGTTTGGGAAGAAACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
3UTR-3UTR TCA 90 bp TCGACTCTGAGATTCTGTAGAACAGGATGCGTTCGAAGATGTTTCATCAAGAGACATCCCAGTGCTTTGTaGAGCTGTGGTGGGAAGATC +
Preference number: 2 (lower is better)
Translates to: STLRFCRTGCVRRCFIKRHPSAL*SCGGKI
Trigger: GATCTTCCCACCACAGCTTCACAAAGCACTGGGATG...TCTCTTGATGAAACATCTTCGAACGCATCCTGTTCTACAGAATCTCAGAGTCGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644587.1
3UTR-3UTR GCA 90 bp CAAGGCAAGGGAAAACACACACAGGGGCATCTACTTGCTGGAAACATGTTGGGAAGAATGCAACCTTCTTaGTTCAGTTTCAAGTCCCTC +
Preference number: 2 (lower is better)
Translates to: QGKGKHTQGHLLAGNMLGRMQPS*FSFKSL
Trigger: GAGGGACTTGAAACTGAAGCAAGAAGGTTGCATTCT...TCCCAACATGTTTCCAGCAAGTAGATGCCCCTGTGTGTGTTTTCCCTTGCCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR CAA 90 bp AGTGGAAGACTGGCATTTCTACTTAGTTCAGGTAGGTTAACTCCCTaGGTGGAGAATGCAACCTTCTTGCTTCAGTTTCAAGTCCCTCTG +
Preference number: 2 (lower is better)
Translates to: SGRLAFLLSSGRLTP*VENATFLLQFQVPL
Trigger: CAGAGGGACTTGAAACTGAAGCAAGAAGGTTGCATTCTCCACCAAGGGAGTTAACCTACCTGAACTAAGTAGAAATGCCAGTCTTCCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
3UTR-3UTR GCA 90 bp ATTAGGAAGAGACGTTCATGTTCTCTGTACAATACATCCATTTACAGAATCAGCCGCAACCCCACTCCGTaGCACATCAGGCTCTGTCTT +
Preference number: 2 (lower is better)
Translates to: IRKRRSCSLYNTSIYRISRNPTP*HIRLCL
Trigger: AAGACAGAGCCTGATGTGGCACGGAGTGGGGTTGCG...GCTGATTCTGTAAATGGATGTATTGTACAGAGAACATGAACGTCTCTTCCTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR-3UTR GCA 90 bp TTTGTTTCTTCCCAAACCTGCCTGATGTCAAAAGTACGTCAAAAGGAGCCTCACTCCCTTGGTGGAGAATaGAACCTTCTTGCTTCAGTT +
Preference number: 2 (lower is better)
Translates to: FVSSQTCLMSKVRQKEPHSLGGE*NLLASV
Trigger: AACTGAAGCAAGAAGGTTGCATTCTCCACCAAGGGA...GTGAGGCTCCTTTTGACGTACTTTTGACATCAGGCAGGTTTGGGAAGAAACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR-3UTR CCA 90 bp AACTCTGTAATAAGTCGAAATACAAGATATAAGGCAGGAAACAAGGCAAGGGAACCTTGGGCAGCCCAATaGGTTATACCCAGGAAACCC +
Preference number: 2 (lower is better)
Translates to: NSVISRNTRYKAGNKAREPWAAQ*VIPRKP
Trigger: GGGTTTCCTGGGTATAACCCATTGGGCTGCCCAAGG...TTCCCTTGCCTTGTTTCCTGCCTTATATCTTGTATTTCGACTTATTACAGAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR-3UTR CCA 90 bp CAGACGCTTAAGTTGACAACTTGGACTTGGCCAATACTGCATTCTAAATCACCAGGGGTAGTGGAAGACTaGCATTTCTACTTAGTTCAG +
Preference number: 2 (lower is better)
Translates to: QTLKLTTWTWPILHSKSPGVVED*HFYLVQ
Trigger: CTGAACTAAGTAGAAATGCCAGTCTTCCACTACCCC...TGGTGATTTAGAATGCAGTATTGGCCAAGTCCAAGTTGTCAACTTAAGCGTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR-3UTR GCA 90 bp TTTGTTTCTTCCCAAACCTGCCTGATGTCAAAAGTACGTCAAAAGGAGCCTCACAGGCAAGAGTGCTCCTaGCTAAAGAGTATTATATCA +
Preference number: 2 (lower is better)
Translates to: FVSSQTCLMSKVRQKEPHRQECS*LKSIIS
Trigger: TGATATAATACTCTTTAGGCAGGAGCACTCTTGCCT...GTGAGGCTCCTTTTGACGTACTTTTGACATCAGGCAGGTTTGGGAAGAAACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR-3UTR GCA 90 bp AGTTCAGGTAGGTTAACTCCCTTGGTGGAGAATGCAACCTTCTTGCTTCAGTTTAGGCAAGAGTGCTCCTaGCTAAAGAGTATTATATCA +
Preference number: 2 (lower is better)
Translates to: SSGRLTPLVENATFLLQFRQECS*LKSIIS
Trigger: TGATATAATACTCTTTAGGCAGGAGCACTCTTGCCT...AAACTGAAGCAAGAAGGTTGCATTCTCCACCAAGGGAGTTAACCTACCTGAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
3UTR CAA 90 bp GGACTTGGCCAATACTGCATTCTAAATCACCACATCATTCCCAACTaGTCACTCATGCTTCAGATGACGAAAATGCCACATCAGATTAAA +
Preference number: 2 (lower is better)
Translates to: GLGQYCILNHHIIPN*SLMLQMTKMPHQIK
Trigger: TTTAATCTGATGTGGCATTTTCGTCATCTGAAGCATGAGTGACAAGTTGGGAATGATGTGGTGATTTAGAATGCAGTATTGGCCAAGTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
3UTR-3UTR CCA 90 bp ATTAGGAAGAGACGTTCATGTTCTCTGTACAATACATCCATTTACAGAATCAGCCACAAGGTCTACAGATaGCATTTTCATAGGAAAGAC +
Preference number: 2 (lower is better)
Translates to: IRKRRSCSLYNTSIYRISHKVYR*HFHRKD
Trigger: GTCTTTCCTATGAAAATGCCATCTGTAGACCTTGTG...GCTGATTCTGTAAATGGATGTATTGTACAGAGAACATGAACGTCTCTTCCTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR-3UTR TCA 90 bp CAAACCATTAATCCATTAAAAGAGCACAACGAATATCAGAGAAGTGATGCCTATGATGTAAAAGGCCAATaGACAAGATACTATGAAGGA +
Preference number: 2 (lower is better)
Translates to: QTINPLKEHNEYQRSDAYDVKGQ*TRYYEG
Trigger: TCCTTCATAGTATCTTGTTCATTGGCCTTTTACATC...ATAGGCATCACTTCTCTGATATTCGTTGTGCTCTTTTAATGGATTAATGGTTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375689.5
ENST00000542461.5
ENST00000646367.1
3UTR CCA 72 bp GGTGGTGACCCTGGAGCCAGATCTGGAAGGCCTTCCTaGGGGCTGCCCAGGGAACTCACCCATGAATCCAGA +
Preference number: 3 (lower is better)
Translates to: GGDPGARSGRPS*GLPRELTHESR
Trigger: TCTGGATTCATGGGTGAGTTCCCTGGGCAGCCCCCAGGAAGGCCTTCCAGATCTGGCTCCAGGGTCACCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
3UTR TCA 72 bp CACAGTCCCAGGAGAGCATGGTCCCAGGTATTGCTGTaGCAGGTGGTGACCCTGGAGCCAGATCTGGAAGGC +
Preference number: 3 (lower is better)
Translates to: HSPRRAWSQVLL*QVVTLEPDLEG
Trigger: GCCTTCCAGATCTGGCTCCAGGGTCACCACCTGTCACAGCAATACCTGGGACCATGCTCTCCTGGGACTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
3UTR CCA 72 bp GGTCCAGCCGGTGACCCAACAGGGCATCGGGCAACCTaGCAGGTCACAAGTCAATCATTTCACCCTCACGTC +
Preference number: 3 (lower is better)
Translates to: GPAGDPTGHRAT*QVTSQSFHPHV
Trigger: GACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACCGGCTGGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
3UTR-3UTR CAA 90 bp CCAGCAGAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTTCAGGCTGGCTGGCCTaGGGCAGCCCAATGGGTTAT +
Preference number: 3 (lower is better)
Translates to: PAEGRRGLDMFGPLFPVFSGWLA*GSPMGY
Trigger: ATAACCCATTGGGCTGCCCAAGGCCAGCCAGCCTGA...AAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTCTGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR-3UTR CAA 90 bp AAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGGTATTGCTGTGACAGGTTCAGGCTGGCTGGCCTaGGGCAGCCCAATGGGTTAT +
Preference number: 3 (lower is better)
Translates to: KGASQSQESMVPGIAVTGSGWLA*GSPMGY
Trigger: ATAACCCATTGGGCTGCCCAAGGCCAGCCAGCCTGA...ACCTGTCACAGCAATACCTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR CCA 72 bp GTGTCCTCTGGCTCCTCTCCCTCCACTGTAGCTGGATaGCGAGACCACTGCAGGGCATCCTTCTGTAATCCA +
Preference number: 3 (lower is better)
Translates to: VSSGSSPSTVAG*RDHCRASFCNP
Trigger: TGGATTACAGAAGGATGCCCTGCAGTGGTCTCGCCATCCAGCTACAGTGGAGGGAGAGGAGCCAGAGGACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644587.1
3UTR-3UTR CAA 90 bp AGGTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCGGTAGGTTAACTCCCTaGGTGGAGAATGCAACCTTC +
Preference number: 3 (lower is better)
Translates to: RSAGAPAPWWAMPGVTLTGRLTP*VENATF
Trigger: GAAGGTTGCATTCTCCACCAAGGGAGTTAACCTACC...GGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
3UTR-3UTR CAA 90 bp CCAGCCGGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATATTCCCCAACCCCATaGTCCAAGCAGAGCTATTCA +
Preference number: 3 (lower is better)
Translates to: PAGDPTGHRATWQVTSQSYSPTP*SKQSYS
Trigger: TGAATAGCTCTGCTTGGACAATGGGGTTGGGGAATA...TGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACCGGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR GCA 72 bp CCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGTaGTGGCTTCTTTCCTGGCCATCAACTCCCCAAAGT +
Preference number: 3 (lower is better)
Translates to: PWWAMPGVTLTL*WLLSWPSTPQS
Trigger: ACTTTGGGGAGTTGATGGCCAGGAAAGAAGCCAGCACAGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
3UTR GCA 72 bp ACAAGGCAAGGGAAAACACACACAGGGGCATCTACTTaGTGGAAACATGTTGGGAGAGAGGCAGGAGCAGGC +
Preference number: 3 (lower is better)
Translates to: TRQGKTHTGAST*WKHVGREAGAG
Trigger: GCCTGCTCCTGCCTCTCTCCCAACATGTTTCCAGCAAGTAGATGCCCCTGTGTGTGTTTTCCCTTGCCTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
3UTR-3UTR CAA 90 bp AAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGGTATTGCTGTGACAGGTGGTAGGTTAACTCCCTaGGTGGAGAATGCAACCTTC +
Preference number: 3 (lower is better)
Translates to: KGASQSQESMVPGIAVTGGRLTP*VENATF
Trigger: GAAGGTTGCATTCTCCACCAAGGGAGTTAACCTACC...ACCTGTCACAGCAATACCTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR TCA 72 bp AGAACCAAGGTCAAACTTGCTCCGTCAACTGGCAAATaGCTCAACTGTGACCCTGAGGTCAGCAGGTGCACC +
Preference number: 3 (lower is better)
Translates to: RTKVKLAPSTGK*LNCDPEVSRCT
Trigger: GGTGCACCTGCTGACCTCAGGGTCACAGTTGAGTCATTTGCCAGTTGACGGAGCAAGTTTGACCTTGGTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR-3UTR CAA 90 bp GGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACAGCACTCAGTGGTAGGTTAACTCCCTaGGTGGAGAATGCAACCTTC +
Preference number: 3 (lower is better)
Translates to: GRSQVNHFTLTSSSTALSGRLTP*VENATF
Trigger: GAAGGTTGCATTCTCCACCAAGGGAGTTAACCTACC...ACTGAGTGCTGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR-3UTR CAA 90 bp GAGATGCCCACTCCCATAGGGTCCAAAGTGACAGGGAGGATGTCAAGCAGAGGAGAACCAAGGTCAAACTaGCTCCGTCAACTGGCAAAT +
Preference number: 3 (lower is better)
Translates to: EMPTPIGSKVTGRMSSRGEPRSN*LRQLAN
Trigger: ATTTGCCAGTTGACGGAGCAAGTTTGACCTTGGTTC...TCCTCTGCTTGACATCCTCCCTGTCACTTTGGACCCTATGGGAGTGGGCATCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR-3UTR CAA 90 bp CATGGCTTTGTTTCTTCCCAAACCTGCCTGATGTCAAAAGTACGTCAAAAGGAGTCAGGCTGGCTGGCCTaGGGCAGCCCAATGGGTTAT +
Preference number: 3 (lower is better)
Translates to: HGFVSSQTCLMSKVRQKESGWLA*GSPMGY
Trigger: ATAACCCATTGGGCTGCCCAAGGCCAGCCAGCCTGA...CTCCTTTTGACGTACTTTTGACATCAGGCAGGTTTGGGAAGAAACAAAGCCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR TCA 72 bp AGCCTCATGGACCAGATCAGTGTCAAACTGTACCCTTaGGTGTCCCCAAAGGTTCCAGCAGAGGGAAGAAGA +
Preference number: 3 (lower is better)
Translates to: SLMDQISVKLYP*VSPKVPAEGRR
Trigger: TCTTCTTCCCTCTGCTGGAACCTTTGGGGACACTCAAGGGTACAGTTTGACACTGATCTGGTCCATGAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
3UTR GCA 72 bp GGCAGGAGCAGGCATGGCTTTGTTTCTTCCCAAACCTaGCTGATGTCAAAAGTACGTCAAAAGGAGCCTCAC +
Preference number: 3 (lower is better)
Translates to: GRSRHGFVSSQT*LMSKVRQKEPH
Trigger: GTGAGGCTCCTTTTGACGTACTTTTGACATCAGGCAGGTTTGGGAAGAAACAAAGCCATGCCTGCTCCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
3UTR-3UTR CAA 90 bp AGATCAGTGTCAAACTGTACCCTTGAGTGTCCCCAAAGGTTCCAGCAGAGGGAAGGTAGGTTAACTCCCTaGGTGGAGAATGCAACCTTC +
Preference number: 3 (lower is better)
Translates to: RSVSNCTLECPQRFQQREGRLTP*VENATF
Trigger: GAAGGTTGCATTCTCCACCAAGGGAGTTAACCTACC...TTCCCTCTGCTGGAACCTTTGGGGACACTCAAGGGTACAGTTTGACACTGATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR-3UTR CAA 90 bp GATGCAGATTCCACGTGGGCCCCGTTTACCTTCAGAGGAGTCAGGACAACTCGAGTCTTTTTCTTTTGTTaGTTCGCCTGTGAGGAAGCT +
Preference number: 3 (lower is better)
Translates to: DADSTWAPFTFRGVRTTRVFFFC*FACEEA
Trigger: AGCTTCCTCACAGGCGAACAAACAAAAGAAAAAGAC...TCGAGTTGTCCTGACTCCTCTGAAGGTAAACGGGGCCCACGTGGAATCTGCATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000644587.1
3UTR CCA 72 bp GAGGATGTCAAGCAGAGGAATTCACCTGCAAACATCTaGACGGCTGACTCACAAGGTCTACAGATGGCATTT +
Preference number: 3 (lower is better)
Translates to: EDVKQRNSPANI*TADSQGLQMAF
Trigger: AAATGCCATCTGTAGACCTTGTGAGTCAGCCGTCCAGATGTTTGCAGGTGAATTCCTCTGCTTGACATCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR TCA 72 bp CCCCATTGTCCAAGCAGAGCTATTCAAGGTTCCAAATaGTCCTGTGGGTTAGTGGATCACACTGAGACAGAA +
Preference number: 3 (lower is better)
Translates to: PHCPSRAIQGSK*SCGLVDHTETE
Trigger: TTCTGTCTCAGTGTGATCCACTAACCCACAGGATCATTTGGAACCTTGAATAGCTCTGCTTGGACAATGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR TCA 72 bp CAAGCAGAGGAATTCACCTGCAAACATCTGGACGGCTaGCTCACAAGGTCTACAGATGGCATTTTCATAGGA +
Preference number: 3 (lower is better)
Translates to: QAEEFTCKHLDG*LTRSTDGIFIG
Trigger: TCCTATGAAAATGCCATCTGTAGACCTTGTGAGTCAGCCGTCCAGATGTTTGCAGGTGAATTCCTCTGCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR-3UTR CAA 90 bp TTTGTTTCTTCCCAAACCTGCCTGATGTCAAAAGTACGTCAAAAGGAGCCTCACGAACCAAGGTCAAACTaGCTCCGTCAACTGGCAAAT +
Preference number: 3 (lower is better)
Translates to: FVSSQTCLMSKVRQKEPHEPRSN*LRQLAN
Trigger: ATTTGCCAGTTGACGGAGCAAGTTTGACCTTGGTTC...GTGAGGCTCCTTTTGACGTACTTTTGACATCAGGCAGGTTTGGGAAGAAACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR-3UTR CAA 90 bp ATGTCAAAAGTACGTCAAAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGAGAAAAGTTCCAAATTaGCTTCAGCAACAGAACCAA +
Preference number: 3 (lower is better)
Translates to: MSKVRQKEPHSPRRAWSQRKVPN*LQQQNQ
Trigger: TTGGTTCTGTTGCTGAAGCAAATTTGGAACTTTTCT...CTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTTTGACGTACTTTTGACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR-3UTR CAA 90 bp TTTGTTTCTTCCCAAACCTGCCTGATGTCAAAAGTACGTCAAAAGGAGCCTCACTATTCCCCAACCCCATaGTCCAAGCAGAGCTATTCA +
Preference number: 3 (lower is better)
Translates to: FVSSQTCLMSKVRQKEPHYSPTP*SKQSYS
Trigger: TGAATAGCTCTGCTTGGACAATGGGGTTGGGGAATA...GTGAGGCTCCTTTTGACGTACTTTTGACATCAGGCAGGTTTGGGAAGAAACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR-3UTR CAA 90 bp CATGGCTTTGTTTCTTCCCAAACCTGCCTGATGTCAAAAGTACGTCAAAAGGAGGAGAATGCAACCTTCTaGCTTCAGTTTCAAGTCCCT +
Preference number: 3 (lower is better)
Translates to: HGFVSSQTCLMSKVRQKEENATF*LQFQVP
Trigger: AGGGACTTGAAACTGAAGCAAGAAGGTTGCATTCTC...CTCCTTTTGACGTACTTTTGACATCAGGCAGGTTTGGGAAGAAACAAAGCCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR TCA 72 bp CCCTGTTCCCGGTCTTTGGTAAACAGACGCTTAAGTTaGCAACTTGGACTTGGCCAATACTGCATTCTAAAT +
Preference number: 3 (lower is better)
Translates to: PCSRSLVNRRLS*QLGLGQYCILN
Trigger: ATTTAGAATGCAGTATTGGCCAAGTCCAAGTTGTCAACTTAAGCGTCTGTTTACCAAAGACCGGGAACAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
3UTR-3UTR CAA 90 bp GCAAGAACCCTCAACTCTGTAATAAGTCGAAATACAAGATATAAGGCAGGAAACGAGAATGCAACCTTCTaGCTTCAGTTTCAAGTCCCT +
Preference number: 3 (lower is better)
Translates to: ARTLNSVISRNTRYKAGNENATF*LQFQVP
Trigger: AGGGACTTGAAACTGAAGCAAGAAGGTTGCATTCTC...GTTTCCTGCCTTATATCTTGTATTTCGACTTATTACAGAGTTGAGGGTTCTTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
3UTR GCA 72 bp GGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTaGTCCTGCCTAAAGAGTATTATATCAATGATATTC +
Preference number: 3 (lower is better)
Translates to: GFSSVNFGGRQE*SCLKSIISMIF
Trigger: GAATATCATTGATATAATACTCTTTAGGCAGGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
3UTR CCA 72 bp TTTGGTAAACAGACGCTTAAGTTGACAACTTGGACTTaGCCAATACTGCATTCTAAATCACCACATCATTCC +
Preference number: 3 (lower is better)
Translates to: FGKQTLKLTTWT*PILHSKSPHHS
Trigger: GGAATGATGTGGTGATTTAGAATGCAGTATTGGCCAAGTCCAAGTTGTCAACTTAAGCGTCTGTTTACCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp GTGACAGGTGGTGACCCTGGAGCCAGATCTGGAAGGCCTTCCTGGGGGCTGCCCAGCCGCTGCTGCTGCTaGACGGGCTGCCGCTCTCGC +
Preference number: 4 (lower is better)
Translates to: VTGGDPGARSGRPSWGLPSRCCC*TGCRSR
Trigger: GCGAGAGCGGCAGCCCGTCCAGCAGCAGCAGCGGCT...GGGCAGCCCCCAGGAAGGCCTTCCAGATCTGGCTCCAGGGTCACCACCTGTCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000651418.1
CDS-3UTR GCA 90 bp GTGACAGGTGGTGACCCTGGAGCCAGATCTGGAAGGCCTTCCTGGGGGCTGCCCTGCTGCTGGACGGGCTaGCGCTCTCGCCATCGGCGT +
Preference number: 4 (lower is better)
Translates to: VTGGDPGARSGRPSWGLPCCWTG*RSRHRR
Trigger: ACGCCGATGGCGAGAGCGGCAGCCCGTCCAGCAGCA...GGGCAGCCCCCAGGAAGGCCTTCCAGATCTGGCTCCAGGGTCACCACCTGTCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000651418.1
CDS-3UTR CCA 90 bp CAGGTCCAGCCGGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAGCGGGGCAGGGTCCTaGGTGACCTCGGCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: QVQPVTQQGIGQPGRSQVSGAGS*VTSAWP
Trigger: TGGCCAGGCCGAGGTCACCCAGGACCCTGCCCCGCT...GACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACCGGCTGGACCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000651418.1
CDS-3UTR TCA 90 bp GTGACAGGTGGTGACCCTGGAGCCAGATCTGGAAGGCCTTCCTGGGGGCTGCCCTCTCTATGGCAGTGGTaGCCTCTCGCCCCTCGGACC +
Preference number: 4 (lower is better)
Translates to: VTGGDPGARSGRPSWGLPSLWQW*PLAPRT
Trigger: GGTCCGAGGGGCGAGAGGTCACCACTGCCATAGAGA...GGGCAGCCCCCAGGAAGGCCTTCCAGATCTGGCTCCAGGGTCACCACCTGTCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GGGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGACGCGGGACCCCGCTaGCCAGAGTGGGAGGAGCCG +
Preference number: 4 (lower is better)
Translates to: GQPNGLYPGNPSSKTRRVDAGPR*PEWEEP
Trigger: CGGCTCCTCCCACTCTGGGCAGCGGGGTCCCGCGTC...GACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646985.1
CDS-3UTR CCA 90 bp GCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGTGCAGCCGCTGCTGCTGCTaGACGGGCTGCCGCTCTCGC +
Preference number: 4 (lower is better)
Translates to: AGAPAPWWAMPGVTLTLCSRCCC*TGCRSR
Trigger: GCGAGAGCGGCAGCCCGTCCAGCAGCAGCAGCGGCT...GCACAGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
CDS-3UTR CCA 90 bp GCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGTGCCACCTCCCTCATCGGTaGCCCCGCCGCCACCTCCAC +
Preference number: 4 (lower is better)
Translates to: AGAPAPWWAMPGVTLTLCHLPHR*PRRHLH
Trigger: GTGGAGGTGGCGGCGGGGCCACCGATGAGGGAGGTG...GCACAGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp GTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGGGCAGGGTCCTGGGTaGCCTCGGCCTGGCCACGAA +
Preference number: 4 (lower is better)
Translates to: VSRCTSPLVGNARSYFNPGQGPG*PRPGHE
Trigger: TTCGTGGCCAGGCCGAGGTCACCCAGGACCCTGCCC...AGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
CDS-3UTR CCA 90 bp GGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGAGCGGGGCAGGGTCCTaGGTGACCTCGGCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: GSPMGYTQETPPARPEGSSGAGS*VTSAWP
Trigger: TGGCCAGGCCGAGGTCACCCAGGACCCTGCCCCGCT...CGACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
CDS-3UTR CCA 90 bp AGGTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCAGCGGGGCAGGGTCCTaGGTGACCTCGGCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: RSAGAPAPWWAMPGVTLTSGAGS*VTSAWP
Trigger: TGGCCAGGCCGAGGTCACCCAGGACCCTGCCCCGCT...GGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGACCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
CDS-3UTR CCA 90 bp AGGTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCTGCTCGGGCCTCCCCTaGGCTCAGGGTGGCCACAGG +
Preference number: 4 (lower is better)
Translates to: RSAGAPAPWWAMPGVTLTCSGLP*AQGGHR
Trigger: CCTGTGGCCACCCTGAGCCCAGGGGAGGCCCGAGCA...GGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGACCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp CAGGTCCAGCCGGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCGGAAGGTCCGAGAGTTaGTCAGGGCACGGAGGTTGG +
Preference number: 4 (lower is better)
Translates to: QVQPVTQQGIGQPGRSQVGRSES*SGHGGW
Trigger: CCAACCTCCGTGCCCTGATCAACTCTCGGACCTTCC...GACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACCGGCTGGACCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR TCA 90 bp CCAGCCGGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCAGCTCCAGAGGCTCACTaGGCCCCTTCCCTGGCTCTC +
Preference number: 4 (lower is better)
Translates to: PAGDPTGHRATWQVTSQSAPEAH*APSLAL
Trigger: GAGAGCCAGGGAAGGGGCTCAGTGAGCCTCTGGAGC...TGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACCGGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp AGGTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCTGCTGCTGGACGGGCTaGCGCTCTCGCCATCGGCGT +
Preference number: 4 (lower is better)
Translates to: RSAGAPAPWWAMPGVTLTCCWTG*RSRHRR
Trigger: ACGCCGATGGCGAGAGCGGCAGCCCGTCCAGCAGCA...GGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGACCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
CDS-3UTR GCA 90 bp GGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACACGGCGCCCGGGTGCGTaGGTGTCTGCCGTGGGTGTG +
Preference number: 4 (lower is better)
Translates to: GQPGRSQVNHFTLTSSSTRRPGA*VSAVGV
Trigger: CACACCCACGGCAGACACGCACGCACCCGGGCGCCG...TGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375687.10
ENST00000613218.4
ENST00000651418.1
CDS-3UTR CCA 90 bp GGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGTGTCTGCGAGGGTCCTaGCGCCAGTCCAACCCCGGC +
Preference number: 4 (lower is better)
Translates to: GSPMGYTQETPPARPEGSCLRGS*RQSNPG
Trigger: GCCGGGGTTGGACTGGCGCCAGGACCCTCGCAGACA...CGACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CAGGTCCAGCCGGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCCTCCGATGGCAGTGGTaGCCGCCTCTCTATGGCAGT +
Preference number: 4 (lower is better)
Translates to: QVQPVTQQGIGQPGRSQVLRWQW*PPLYGS
Trigger: ACTGCCATAGAGAGGCGGCCACCACTGCCATCGGAG...GACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACCGGCTGGACCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGTGCCCCCTCCGATGGCAGTaGTGGCCGCCTCTCTATGGC +
Preference number: 4 (lower is better)
Translates to: AGAPAPWWAMPGVTLTLCPLRWQ*WPPLYG
Trigger: GCCATAGAGAGGCGGCCACCACTGCCATCGGAGGGG...GCACAGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CCAGCAGAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTCACCTCCCTCATCGGTaGCCCCGCCGCCACCTCCAC +
Preference number: 4 (lower is better)
Translates to: PAEGRRGLDMFGPLFPVFHLPHR*PRRHLH
Trigger: GTGGAGGTGGCGGCGGGGCCACCGATGAGGGAGGTG...AAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTCTGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGCACCTCCCTCATCGGTaGCCCCGCCGCCACCTCCAC +
Preference number: 4 (lower is better)
Translates to: QGIGQPGRSQVNHFTLTSHLPHR*PRRHLH
Trigger: GTGGAGGTGGCGGCGGGGCCACCGATGAGGGAGGTG...CGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGGGCAAGGCCTGGCATaGCTGGTCCCCAGTGGGAGC +
Preference number: 4 (lower is better)
Translates to: VSRCTSPLVGNARSYFNPGQGLA*LVPSGS
Trigger: GCTCCCACTGGGGACCAGCCATGCCAGGCCTTGCCC...AGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp TCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGTCGGGTCCGCAGGCCTaGGGCGCTGAAGGGTTGCAG +
Preference number: 4 (lower is better)
Translates to: SAGAPAPWWAMPGVTLTLSGPQA*GAEGLQ
Trigger: CTGCAACCCTTCAGCGCCCCAGGCCTGCGGACCCGA...CAGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp AGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCCAAGTGACAGAGGGCTTTAGCAGCAGGTCCAGCCGGTaGCCCAACAGGGCATCGGGC +
Preference number: 4 (lower is better)
Translates to: RKPLQQDQKGRQVTEGFSSRSSR*PNRASG
Trigger: GCCCGATGCCCTGTTGGGTCACCGGCTGGACCTGCT...GCTAAAGCCCTCTGTCACTTGGCGACCCTTCTGGTCTTGCTGGAGGGGTTTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp CCAGCAGAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTTGCTGCTGGACGGGCTaGCGCTCTCGCCATCGGCGT +
Preference number: 4 (lower is better)
Translates to: PAEGRRGLDMFGPLFPVFCCWTG*RSRHRR
Trigger: ACGCCGATGGCGAGAGCGGCAGCCCGTCCAGCAGCA...AAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTCTGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000651418.1
CDS-3UTR GCA 90 bp GACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTGGGCCAGAGAGCCGCTaGTGCTGCTGGACGGGCTGC +
Preference number: 4 (lower is better)
Translates to: DPTGHRATWQVTSQSFHPGPESR*CCWTGC
Trigger: GCAGCCCGTCCAGCAGCAGCAGCGGCTCTCTGGCCC...AGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000651418.1
CDS-3UTR GCA 90 bp CAGAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTAGGGCCAGAGAGCCGCTaGTGCTGCTGGACGGGCTGC +
Preference number: 4 (lower is better)
Translates to: QREEEDWTCLGPCSRSLVGPESR*CCWTGC
Trigger: GCAGCCCGTCCAGCAGCAGCAGCGGCTCTCTGGCCC...TACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000651418.1
CDS-3UTR GCA 90 bp GCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGTGCCTCCAGGTCGGGTGCTaGAGAGGATGTGCCTGGCAG +
Preference number: 4 (lower is better)
Translates to: AGAPAPWWAMPGVTLTLCLQVGC*RGCAWQ
Trigger: CTGCCAGGCACATCCTCTGCAGCACCCGACCTGGAG...GCACAGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGTGCCACTGCTGCTGCCTCTaGCACCTCCCTCATCGGTGG +
Preference number: 4 (lower is better)
Translates to: AGAPAPWWAMPGVTLTLCHCCCL*HLPHRW
Trigger: CCACCGATGAGGGAGGTGGCAGAGGCAGCAGCAGTG...GCACAGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp CAGGTCCAGCCGGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCCGCAACCCCACTCCGTaGCACATCAGGCTCTGTCTT +
Preference number: 4 (lower is better)
Translates to: QVQPVTQQGIGQPGRSQVRNPTP*HIRLCL
Trigger: AAGACAGAGCCTGATGTGGCACGGAGTGGGGTTGCG...GACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACCGGCTGGACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACAGCGGGGCAGGGTCCTaGGTGACCTCGGCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: GDPTGHRATWQVTSQSFHSGAGS*VTSAWP
Trigger: TGGCCAGGCCGAGGTCACCCAGGACCCTGCCCCGCT...GTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000651418.1
CDS-3UTR CCA 90 bp GCCTTGGGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGCAAGGCCTGGCATaGCTGGTCCCCAGTGGGAGC +
Preference number: 4 (lower is better)
Translates to: ALGSPMGYTQETPPARPEGQGLA*LVPSGS
Trigger: GCTCCCACTGGGGACCAGCCATGCCAGGCCTTGCCC...TTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCCCAAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CCAGCAGAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGGCAAGGCCTGGCATaGCTGGTCCCCAGTGGGAGC +
Preference number: 4 (lower is better)
Translates to: PAEGRRGLDMFGPLFPVFGQGLA*LVPSGS
Trigger: GCTCCCACTGGGGACCAGCCATGCCAGGCCTTGCCC...AAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTCTGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CAGGTCCAGCCGGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCGCAATGCAGGAGGGGTaGGAGCAGCTTTCTCCCACT +
Preference number: 4 (lower is better)
Translates to: QVQPVTQQGIGQPGRSQVAMQEG*EQLSPT
Trigger: AGTGGGAGAAAGCTGCTCCCACCCCTCCTGCATTGC...GACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACCGGCTGGACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp GTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTTCTCTATGGCAGTGGTaGCCTCTCGCCCCTCGGACC +
Preference number: 4 (lower is better)
Translates to: VSRCTSPLVGNARSYFNPSLWQW*PLAPRT
Trigger: GGTCCGAGGGGCGAGAGGTCACCACTGCCATAGAGA...AGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp AGGTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCTCTCTATGGCAGTGGTaGCCTCTCGCCCCTCGGACC +
Preference number: 4 (lower is better)
Translates to: RSAGAPAPWWAMPGVTLTSLWQW*PLAPRT
Trigger: GGTCCGAGGGGCGAGAGGTCACCACTGCCATAGAGA...GGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGACCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp AGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCCAAGTGACAGAGGGCTTTAGCGCAGGCCTGGGGCGCTaGAGGGTTGCAGCCACATTC +
Preference number: 4 (lower is better)
Translates to: RKPLQQDQKGRQVTEGFSAGLGR*RVAATF
Trigger: GAATGTGGCTGCAACCCTTCAGCGCCCCAGGCCTGC...GCTAAAGCCCTCTGTCACTTGGCGACCCTTCTGGTCTTGCTGGAGGGGTTTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp GCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCCAAGCAGGCCTGGGGCGCTaGAGGGTTGCAGCCACATTC +
Preference number: 4 (lower is better)
Translates to: AQWVIPRKPLQQDQKGRQAGLGR*RVAATF
Trigger: GAATGTGGCTGCAACCCTTCAGCGCCCCAGGCCTGC...TTGGCGACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp GCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGTGCGGCATCCCTTCCAAGTaGCCCACCAGTTCCAGGGGA +
Preference number: 4 (lower is better)
Translates to: AGAPAPWWAMPGVTLTLCGIPSK*PTSSRG
Trigger: TCCCCTGGAACTGGTGGGTCACTTGGAAGGGATGCC...GCACAGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp CAGAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTAGCTCTGCTGAGGGACTaGGACAGGACCGACGGCGGG +
Preference number: 4 (lower is better)
Translates to: QREEEDWTCLGPCSRSLVALLRD*DRTDGG
Trigger: CCCGCCGTCGGTCCTGTCTCAGTCCCTCAGCAGAGC...TACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375687.10
ENST00000613218.4
ENST00000651418.1
CDS-3UTR TCA 90 bp AGGTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCGCTTTCCCGCTCTGCTaGGGGACTGAGACAGGACCG +
Preference number: 4 (lower is better)
Translates to: RSAGAPAPWWAMPGVTLTAFPLC*GTETGP
Trigger: CGGTCCTGTCTCAGTCCCTCAGCAGAGCGGGAAAGC...GGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGACCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
CDS-3UTR TCA 90 bp GCCCCGTTTACCTTCAGAGGAGTCAGGACAACTCGAGGCAGCATCACCCCAGTCGCTTTCCCGCTCTGCTaGGGGACTGAGACAGGACCG +
Preference number: 4 (lower is better)
Translates to: APFTFRGVRTTRGSITPVAFPLC*GTETGP
Trigger: CGGTCCTGTCTCAGTCCCTCAGCAGAGCGGGAAAGC...GACTGGGGTGATGCTGCCTCGAGTTGTCCTGACTCCTCTGAAGGTAAACGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000644587.1
CDS-3UTR GCA 90 bp GGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACATGCTGCTGGACGGGCTaGCGCTCTCGCCATCGGCGT +
Preference number: 4 (lower is better)
Translates to: GQPGRSQVNHFTLTSSSTCCWTG*RSRHRR
Trigger: ACGCCGATGGCGAGAGCGGCAGCCCGTCCAGCAGCA...TGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000651418.1
CDS-3UTR GCA 90 bp AGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTAAACGGGCCAGAGAGCCGCTaGTGCTGCTGGACGGGCTGC +
Preference number: 4 (lower is better)
Translates to: REEEDWTCLGPCSRSLVNGPESR*CCWTGC
Trigger: GCAGCCCGTCCAGCAGCAGCAGCGGCTCTCTGGCCC...GTTTACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000651418.1
CDS-3UTR GCA 90 bp CTTTCACATACACAGGTGCGTGGAGATGCCCACTCCCATAGGGTCCAAAGTGACGGGCCAGAGAGCCGCTaGTGCTGCTGGACGGGCTGC +
Preference number: 4 (lower is better)
Translates to: LSHTQVRGDAHSHRVQSDGPESR*CCWTGC
Trigger: GCAGCCCGTCCAGCAGCAGCAGCGGCTCTCTGGCCC...GTCACTTTGGACCCTATGGGAGTGGGCATCTCCACGCACCTGTGTATGTGAAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
CDS-3UTR GCA 90 bp CCAGCCGGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCAGGGACTGCTCAGCCCTaGTGGGTCAGTCTTAGCCTC +
Preference number: 4 (lower is better)
Translates to: PAGDPTGHRATWQVTSQSGTAQP*WVSLSL
Trigger: GAGGCTAAGACTGACCCAGCAGGGCTGAGCAGTCCC...TGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACCGGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR GCA 90 bp CCAGCCGGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCACTCGCCCCTCGGACCTaGAGAGCACGGGCTTTAATG +
Preference number: 4 (lower is better)
Translates to: PAGDPTGHRATWQVTSQSLAPRT*RARALM
Trigger: CATTAAAGCCCGTGCTCTGCAGGTCCGAGGGGCGAG...TGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACCGGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GGGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGGGGCGCTGAAGGGTTaGAGCCACATTCCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: GQPNGLYPGNPSSKTRRVGALKG*SHIPRA
Trigger: GGCTCTGGGAATGTGGCTGCAACCCTTCAGCGCCCC...GACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGGGGCGCTGAAGGGTTaGAGCCACATTCCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: VSRCTSPLVGNARSYFNPGALKG*SHIPRA
Trigger: GGCTCTGGGAATGTGGCTGCAACCCTTCAGCGCCCC...AGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GTGACAGGTGGTGACCCTGGAGCCAGATCTGGAAGGCCTTCCTGGGGGCTGCCCGATGCAGATTCCACGTaGGCCCCGTTTACCTTCAGA +
Preference number: 4 (lower is better)
Translates to: VTGGDPGARSGRPSWGLPDADST*APFTFR
Trigger: TCTGAAGGTAAACGGGGCCCACGTGGAATCTGCATC...GGGCAGCCCCCAGGAAGGCCTTCCAGATCTGGCTCCAGGGTCACCACCTGTCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp GGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCTCTCGCCATCGGCGTaGCAGCCCGAGAACCCTGAT +
Preference number: 4 (lower is better)
Translates to: GSPMGYTQETPPARPEGSLSPSA*QPENPD
Trigger: ATCAGGGTTCTCGGGCTGCCACGCCGATGGCGAGAG...CGACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
CDS-3UTR CCA 90 bp GTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTCTCTCGCCATCGGCGTaGCAGCCCGAGAACCCTGAT +
Preference number: 4 (lower is better)
Translates to: VSRCTSPLVGNARSYFNPLSPSA*QPENPD
Trigger: ATCAGGGTTCTCGGGCTGCCACGCCGATGGCGAGAG...AGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
CDS-3UTR CCA 90 bp AGGTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCTGGGTGACCTCGGCCTaGCCACGAATAGCAGCGCTG +
Preference number: 4 (lower is better)
Translates to: RSAGAPAPWWAMPGVTLTWVTSA*PRIAAL
Trigger: CAGCGCTGCTATTCGTGGCCAGGCCGAGGTCACCCA...GGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGACCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
CDS-3UTR CCA 90 bp GGGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCTGGGTGACCTCGGCCTaGCCACGAATAGCAGCGCTG +
Preference number: 4 (lower is better)
Translates to: GQPNGLYPGNPSSKTRRVWVTSA*PRIAAL
Trigger: CAGCGCTGCTATTCGTGGCCAGGCCGAGGTCACCCA...GACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
CDS-3UTR CCA 90 bp GTGACAGGTGGTGACCCTGGAGCCAGATCTGGAAGGCCTTCCTGGGGGCTGCCCGCTAGGAATTCTGTCTaGAGATGCAGAGGCACGTGC +
Preference number: 4 (lower is better)
Translates to: VTGGDPGARSGRPSWGLPARNSV*RCRGTC
Trigger: GCACGTGCCTCTGCATCTCCAGACAGAATTCCTAGC...GGGCAGCCCCCAGGAAGGCCTTCCAGATCTGGCTCCAGGGTCACCACCTGTCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp GACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTTGTCTGCGAGGGTCCTaGCGCCAGTCCAACCCCGGC +
Preference number: 4 (lower is better)
Translates to: DPTGHRATWQVTSQSFHPCLRGS*RQSNPG
Trigger: GCCGGGGTTGGACTGGCGCCAGGACCCTCGCAGACA...AGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp GGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACATGTCTGCGAGGGTCCTaGCGCCAGTCCAACCCCGGC +
Preference number: 4 (lower is better)
Translates to: GQPGRSQVNHFTLTSSSTCLRGS*RQSNPG
Trigger: GCCGGGGTTGGACTGGCGCCAGGACCCTCGCAGACA...TGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp GCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGTGCCTCCGATGGCAGTGGTaGCCGCCTCTCTATGGCAGT +
Preference number: 4 (lower is better)
Translates to: AGAPAPWWAMPGVTLTLCLRWQW*PPLYGS
Trigger: ACTGCCATAGAGAGGCGGCCACCACTGCCATCGGAG...GCACAGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp AGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCCAAGTGACAGAGGGCTTTAGCCCCCTCCGATGGCAGTaGTGGCCGCCTCTCTATGGC +
Preference number: 4 (lower is better)
Translates to: RKPLQQDQKGRQVTEGFSPLRWQ*WPPLYG
Trigger: GCCATAGAGAGGCGGCCACCACTGCCATCGGAGGGG...GCTAAAGCCCTCTGTCACTTGGCGACCCTTCTGGTCTTGCTGGAGGGGTTTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTAAATGCTCGGGCCTCCCCTaGGCTCAGGGTGGCCACAGG +
Preference number: 4 (lower is better)
Translates to: EGRRGLDMFGPLFPVFGKCSGLP*AQGGHR
Trigger: CCTGTGGCCACCCTGAGCCCAGGGGAGGCCCGAGCA...TTTACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CCAGCCGGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCAGGAGCAACGGGGAGTTaGGAGGCATCTCCTAGCCCA +
Preference number: 4 (lower is better)
Translates to: PAGDPTGHRATWQVTSQSGATGS*EASPSP
Trigger: TGGGCTAGGAGATGCCTCCCAACTCCCCGTTGCTCC...TGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACCGGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CTTCCTGGGGGCTGCCCAGGGAACTCACCCATGAATCCAGAAGCACTTAACACTGGGCAAGGCCTGGCATaGCTGGTCCCCAGTGGGAGC +
Preference number: 4 (lower is better)
Translates to: LPGGCPGNSPMNPEALNTGQGLA*LVPSGS
Trigger: GCTCCCACTGGGGACCAGCCATGCCAGGCCTTGCCC...AGTGTTAAGTGCTTCTGGATTCATGGGTGAGTTCCCTGGGCAGCCCCCAGGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTAGTAGGGGCAAGGCCTaGCATGGCTGGTCCCCAGTG +
Preference number: 4 (lower is better)
Translates to: VSRCTSPLVGNARSYFNPSRGKA*HGWSPV
Trigger: CACTGGGGACCAGCCATGCCAGGCCTTGCCCCTACT...AGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp TCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGAGTAGGGGCAAGGCCTaGCATGGCTGGTCCCCAGTG +
Preference number: 4 (lower is better)
Translates to: SAGAPAPWWAMPGVTLTLSRGKA*HGWSPV
Trigger: CACTGGGGACCAGCCATGCCAGGCCTTGCCCCTACT...CAGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CAGAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTATCGGGTCCGCAGGCCTaGGGCGCTGAAGGGTTGCAG +
Preference number: 4 (lower is better)
Translates to: QREEEDWTCLGPCSRSLVSGPQA*GAEGLQ
Trigger: CTGCAACCCTTCAGCGCCCCAGGCCTGCGGACCCGA...TACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp TCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGAGAGCTCAGGCTGGCTaGCCTTGGGCAGCCCAATGG +
Preference number: 4 (lower is better)
Translates to: SAGAPAPWWAMPGVTLTLRAQAG*PWAAQW
Trigger: CCATTGGGCTGCCCAAGGCCAGCCAGCCTGAGCTCT...CAGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGTGCGCACCAGCCCCCTGGTaGGCAATGCCAGGAGTTACT +
Preference number: 4 (lower is better)
Translates to: AGAPAPWWAMPGVTLTLCAPAPW*AMPGVT
Trigger: AGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGC...GCACAGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GTGACAGGTGGTGACCCTGGAGCCAGATCTGGAAGGCCTTCCTGGGGGCTGCCCCTCTGGGCAGCCTCATaGACCAGATCAGTGTCAAAC +
Preference number: 4 (lower is better)
Translates to: VTGGDPGARSGRPSWGLPLWAAS*TRSVSN
Trigger: GTTTGACACTGATCTGGTCCATGAGGCTGCCCAGAG...GGGCAGCCCCCAGGAAGGCCTTCCAGATCTGGCTCCAGGGTCACCACCTGTCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR TCA 90 bp TGTAGGAGGAGAGATGTGAAAAGCAAGATGCGTTTGCTCGGTGGCATGTGGGCAGGGCAGGGTCCTGGGTaGCCTCGGCCTGGCCACGAA +
Preference number: 4 (lower is better)
Translates to: CRRRDVKSKMRLLGGMWAGQGPG*PRPGHE
Trigger: TTCGTGGCCAGGCCGAGGTCACCCAGGACCCTGCCC...TGCCCACATGCCACCGAGCAAACGCATCTTGCTTTTCACATCTCTCCTCCTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000651418.1
CDS-3UTR TCA 90 bp ATGTCAAAAGTACGTCAAAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGGGGCAGGGTCCTGGGTaGCCTCGGCCTGGCCACGAA +
Preference number: 4 (lower is better)
Translates to: MSKVRQKEPHSPRRAWSQGQGPG*PRPGHE
Trigger: TTCGTGGCCAGGCCGAGGTCACCCAGGACCCTGCCC...CTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTTTGACGTACTTTTGACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000651418.1
CDS-3UTR TCA 90 bp AGGTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCGGAAGGTCCGAGAGTTaGTCAGGGCACGGAGGTTGG +
Preference number: 4 (lower is better)
Translates to: RSAGAPAPWWAMPGVTLTGRSES*SGHGGW
Trigger: CCAACCTCCGTGCCCTGATCAACTCTCGGACCTTCC...GGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp AGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCCAAGTGACAGAGGGCTTTAGCTCTCTATGGCAGTGGTaGCCTCTCGCCCCTCGGACC +
Preference number: 4 (lower is better)
Translates to: RKPLQQDQKGRQVTEGFSSLWQW*PLAPRT
Trigger: GGTCCGAGGGGCGAGAGGTCACCACTGCCATAGAGA...GCTAAAGCCCTCTGTCACTTGGCGACCCTTCTGGTCTTGCTGGAGGGGTTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp GGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACGCAGGCCTGGGGCGCTaGAGGGTTGCAGCCACATTC +
Preference number: 4 (lower is better)
Translates to: GDPTGHRATWQVTSQSFHAGLGR*RVAATF
Trigger: GAATGTGGCTGCAACCCTTCAGCGCCCCAGGCCTGC...GTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp GGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACAGCAGGCCTGGGGCGCTaGAGGGTTGCAGCCACATTC +
Preference number: 4 (lower is better)
Translates to: GQPGRSQVNHFTLTSSSTAGLGR*RVAATF
Trigger: GAATGTGGCTGCAACCCTTCAGCGCCCCAGGCCTGC...TGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp GGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGGGCATCCCTTCCAAGTaGCCCACCAGTTCCAGGGGA +
Preference number: 4 (lower is better)
Translates to: GSPMGYTQETPPARPEGSGIPSK*PTSSRG
Trigger: TCCCCTGGAACTGGTGGGTCACTTGGAAGGGATGCC...CGACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp CTTTCACATACACAGGTGCGTGGAGATGCCCACTCCCATAGGGTCCAAAGTGACAGCAGGTCCAGCCGGTaGCCCAACAGGGCATCGGGC +
Preference number: 4 (lower is better)
Translates to: LSHTQVRGDAHSHRVQSDSRSSR*PNRASG
Trigger: GCCCGATGCCCTGTTGGGTCACCGGCTGGACCTGCT...GTCACTTTGGACCCTATGGGAGTGGGCATCTCCACGCACCTGTGTATGTGAAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp GAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTAAAGCTCTGCTGAGGGACTaGGACAGGACCGACGGCGGG +
Preference number: 4 (lower is better)
Translates to: EGRRGLDMFGPLFPVFGKALLRD*DRTDGG
Trigger: CCCGCCGTCGGTCCTGTCTCAGTCCCTCAGCAGAGC...TTTACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375687.10
ENST00000613218.4
ENST00000651418.1
CDS-3UTR GCA 90 bp GCCTTGGGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAACTGGCAGATGGGGACTaGTCAGCCCTGCTGGGTCAG +
Preference number: 4 (lower is better)
Translates to: ALGSPMGYTQETPPARPELADGD*SALLGQ
Trigger: CTGACCCAGCAGGGCTGAGCAGTCCCCATCTGCCAG...TTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCCCAAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCCAAACCCTCCAGGTCGGGTaGTGCAGAGGATGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: AQWVIPRKPLQQDQKGRQTLQVG*CRGCAW
Trigger: CCAGGCACATCCTCTGCAGCACCCGACCTGGAGGGT...TTGGCGACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp AGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCCAAGTGACAGAGGGCTTTAGCACCCTCCAGGTCGGGTaGTGCAGAGGATGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: RKPLQQDQKGRQVTEGFSTLQVG*CRGCAW
Trigger: CCAGGCACATCCTCTGCAGCACCCGACCTGGAGGGT...GCTAAAGCCCTCTGTCACTTGGCGACCCTTCTGGTCTTGCTGGAGGGGTTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp AGGTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTCGCCCCTCGGACCTaGAGAGCACGGGCTTTAATG +
Preference number: 4 (lower is better)
Translates to: RSAGAPAPWWAMPGVTLTLAPRT*RARALM
Trigger: CATTAAAGCCCGTGCTCTGCAGGTCCGAGGGGCGAG...GGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GTGACAGGTGGTGACCCTGGAGCCAGATCTGGAAGGCCTTCCTGGGGGCTGCCCCTACCCTGCAGCAACTaGATCACAAGTGGGTTAGTG +
Preference number: 4 (lower is better)
Translates to: VTGGDPGARSGRPSWGLPLPCSN*ITSGLV
Trigger: CACTAACCCACTTGTGATGCAGTTGCTGCAGGGTAG...GGGCAGCCCCCAGGAAGGCCTTCCAGATCTGGCTCCAGGGTCACCACCTGTCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp AGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCCAAGTGACAGAGGGCTTTAGCGGGGCGCTGAAGGGTTaGAGCCACATTCCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: RKPLQQDQKGRQVTEGFSGALKG*SHIPRA
Trigger: GGCTCTGGGAATGTGGCTGCAACCCTTCAGCGCCCC...GCTAAAGCCCTCTGTCACTTGGCGACCCTTCTGGTCTTGCTGGAGGGGTTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp CCAGCAGAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGGGCGCTGAAGGGTTaGAGCCACATTCCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: PAEGRRGLDMFGPLFPVFGALKG*SHIPRA
Trigger: GGCTCTGGGAATGTGGCTGCAACCCTTCAGCGCCCC...AAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTCTGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp CAGAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTAGGCCTTCCTGGGGGCTaGCCAGGGAACTCACCCATG +
Preference number: 4 (lower is better)
Translates to: QREEEDWTCLGPCSRSLVGLPGG*PGNSPM
Trigger: CATGGGTGAGTTCCCTGGGCAGCCCCCAGGAAGGCC...TACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR GCA 90 bp GACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTGGCCTTCCTGGGGGCTaGCCAGGGAACTCACCCATG +
Preference number: 4 (lower is better)
Translates to: DPTGHRATWQVTSQSFHPGLPGG*PGNSPM
Trigger: CATGGGTGAGTTCCCTGGGCAGCCCCCAGGAAGGCC...AGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR GCA 90 bp AAAAGTACGTCAAAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGGTATTCGGCGCCCGGGTGCGTaGGTGTCTGCCGTGGGTGTG +
Preference number: 4 (lower is better)
Translates to: KSTSKGASQSQESMVPGIRRPGA*VSAVGV
Trigger: CACACCCACGGCAGACACGCACGCACCCGGGCGCCG...AATACCTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTTTGACGTACTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375687.10
ENST00000613218.4
ENST00000651418.1
CDS-3UTR GCA 90 bp ACCTGTAATCCATCCCAGTGCTTTGTGAAGCTGTGGTGGGAAGATCACTTGAGGGACGCGGGACCCCGCTaGCCAGAGTGGGAGGAGCCG +
Preference number: 4 (lower is better)
Translates to: TCNPSQCFVKLWWEDHLRDAGPR*PEWEEP
Trigger: CGGCTCCTCCCACTCTGGGCAGCGGGGTCCCGCGTC...CCTCAAGTGATCTTCCCACCACAGCTTCACAAAGCACTGGGATGGATTACAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000645035.1
ENST00000649901.1
CDS-3UTR GCA 90 bp TGTAATCCATCCCAGTGCTTTGTGAAGCTGTGGTGGGAAGATCACTTGAGGCCAGACGCGGGACCCCGCTaGCCAGAGTGGGAGGAGCCG +
Preference number: 4 (lower is better)
Translates to: CNPSQCFVKLWWEDHLRPDAGPR*PEWEEP
Trigger: CGGCTCCTCCCACTCTGGGCAGCGGGGTCCCGCGTC...TGGCCTCAAGTGATCTTCCCACCACAGCTTCACAAAGCACTGGGATGGATTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000645035.1
ENST00000649901.1
CDS-3UTR CCA 90 bp TGGCTCCTCTCCCTCCACTGTAGCTGGATGGCGAGACCACTGCAGGGCATCCTTTCCCTCCACTGTAGCTaGATGGCGAGACCACTGCAG +
Preference number: 4 (lower is better)
Translates to: WLLSLHCSWMARPLQGILSLHCS*MARPLQ
Trigger: CTGCAGTGGTCTCGCCATCCAGCTACAGTGGAGGGA...AAGGATGCCCTGCAGTGGTCTCGCCATCCAGCTACAGTGGAGGGAGAGGAGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644587.1
CDS-3UTR CCA 90 bp GCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGTGCATCAGCCGTGTCCTCTaGCTCCTCTCCCTCCACTGT +
Preference number: 4 (lower is better)
Translates to: AGAPAPWWAMPGVTLTLCISRVL*LLSLHC
Trigger: ACAGTGGAGGGAGAGGAGCCAGAGGACACGGCTGAT...GCACAGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp ATGTCAAAAGTACGTCAAAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGAGCCGCTGCTGCTGCTaGACGGGCTGCCGCTCTCGC +
Preference number: 4 (lower is better)
Translates to: MSKVRQKEPHSPRRAWSQSRCCC*TGCRSR
Trigger: GCGAGAGCGGCAGCCCGTCCAGCAGCAGCAGCGGCT...CTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTTTGACGTACTTTTGACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000651418.1
CDS-3UTR CCA 90 bp GGGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCTCGCTGTCGGGTGGCTaGACCACGCTGTATACGCAC +
Preference number: 4 (lower is better)
Translates to: GQPNGLYPGNPSSKTRRVSLSGG*TTLYTH
Trigger: GTGCGTATACAGCGTGGTCCAGCCACCCGACAGCGA...GACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GGGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCACTGCTCAGCCCTGCTaGGTCAGTCTTAGCCTCCCC +
Preference number: 4 (lower is better)
Translates to: GQPNGLYPGNPSSKTRRVTAQPC*VSLSLP
Trigger: GGGGAGGCTAAGACTGACCCAGCAGGGCTGAGCAGT...GACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GAGAGGCAGGAGCAGGCATGGCTTTGTTTCTTCCCAAACCTGCCTGATGTCAAATGCTCGGGCCTCCCCTaGGCTCAGGGTGGCCACAGG +
Preference number: 4 (lower is better)
Translates to: ERQEQAWLCFFPNLPDVKCSGLP*AQGGHR
Trigger: CCTGTGGCCACCCTGAGCCCAGGGGAGGCCCGAGCA...TTTGACATCAGGCAGGTTTGGGAAGAAACAAAGCCATGCCTGCTCCTGCCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CCAGCAGAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTAAGGCCTGGCATGGCTaGTCCCCAGTGGGAGCAACG +
Preference number: 4 (lower is better)
Translates to: PAEGRRGLDMFGPLFPVFKAWHG*SPVGAT
Trigger: CGTTGCTCCCACTGGGGACCAGCCATGCCAGGCCTT...AAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTCTGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CAGGTCCAGCCGGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCGCTGGTACTCAGTACTaGCCAGCAGTAGGGAATCTG +
Preference number: 4 (lower is better)
Translates to: QVQPVTQQGIGQPGRSQVAGTQY*PAVGNL
Trigger: CAGATTCCCTACTGCTGGCCAGTACTGAGTACCAGC...GACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACCGGCTGGACCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CAGGTCCAGCCGGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCGCCAACAAAGGCATGTaGCTTTGGAGCCCAGTCTTC +
Preference number: 4 (lower is better)
Translates to: QVQPVTQQGIGQPGRSQVANKGM*LWSPVF
Trigger: GAAGACTGGGCTCCAAAGCCACATGCCTTTGTTGGC...GACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACCGGCTGGACCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGTGCAGGCTGCACGCACACTaGAGCGAGATGCTTTCCACC +
Preference number: 4 (lower is better)
Translates to: AGAPAPWWAMPGVTLTLCRLHAH*SEMLST
Trigger: GGTGGAAAGCATCTCGCTCCAGTGTGCGTGCAGCCT...GCACAGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGGCACCAGCCCCCTGGTaGGCAATGCCAGGAGTTACT +
Preference number: 4 (lower is better)
Translates to: GSPMGYTQETPPARPEGSAPAPW*AMPGVT
Trigger: AGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGC...CGACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CAAGTGACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCCCCCGCTGCCCAGAGTaGGAGGAGCCGGCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: QVTEGFSSVNFGGRQECSPRCPE*EEPACQ
Trigger: CTGGCAGGCCGGCTCCTCCCACTCTGGGCAGCGGGG...GGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGTCACTTG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000646985.1
CDS-3UTR CCA 90 bp TGTAATCCATCCCAGTGCTTTGTGAAGCTGTGGTGGGAAGATCACTTGAGGCCACCCCGCTGCCCAGAGTaGGAGGAGCCGGCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: CNPSQCFVKLWWEDHLRPPRCPE*EEPACQ
Trigger: CTGGCAGGCCGGCTCCTCCCACTCTGGGCAGCGGGG...TGGCCTCAAGTGATCTTCCCACCACAGCTTCACAAAGCACTGGGATGGATTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649901.1
CDS-3UTR TCA 90 bp GTGACAGGTGGTGACCCTGGAGCCAGATCTGGAAGGCCTTCCTGGGGGCTGCCCGTCCTTCTGCCTCTATaGCCTGCAGAATCTGTTTTG +
Preference number: 4 (lower is better)
Translates to: VTGGDPGARSGRPSWGLPVLLPL*PAESVL
Trigger: CAAAACAGATTCTGCAGGTCATAGAGGCAGAAGGAC...GGGCAGCCCCCAGGAAGGCCTTCCAGATCTGGCTCCAGGGTCACCACCTGTCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR TCA 90 bp CTTGGTGGAGAATGCAACCTTCTTGCTTCAGTTTCAAGTCCCTCTGGGAGTCAGGGGCAGGGTCCTGGGTaGCCTCGGCCTGGCCACGAA +
Preference number: 4 (lower is better)
Translates to: LGGECNLLASVSSPSGSQGQGPG*PRPGHE
Trigger: TTCGTGGCCAGGCCGAGGTCACCCAGGACCCTGCCC...CTGACTCCCAGAGGGACTTGAAACTGAAGCAAGAAGGTTGCATTCTCCACCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
CDS-3UTR TCA 90 bp AGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCCAAGTGACAGAGGGCTTTAGCGGAAGGTCCGAGAGTTaGTCAGGGCACGGAGGTTGG +
Preference number: 4 (lower is better)
Translates to: RKPLQQDQKGRQVTEGFSGRSES*SGHGGW
Trigger: CCAACCTCCGTGCCCTGATCAACTCTCGGACCTTCC...GCTAAAGCCCTCTGTCACTTGGCGACCCTTCTGGTCTTGCTGGAGGGGTTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp CAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGACTCCGTGGTGGGGATaGTCCGGGGGCATATCTGGT +
Preference number: 4 (lower is better)
Translates to: QGIGQPGRSQVNHFTLTSTPWWG*SGGISG
Trigger: ACCAGATATGCCCCCGGATCATCCCCACCACGGAGT...CGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR TCA 90 bp GCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGTGCCACTGCTGTCCTCCGTaGGGTGACCTTCAAAGTCAG +
Preference number: 4 (lower is better)
Translates to: AGAPAPWWAMPGVTLTLCHCCPP*GDLQSQ
Trigger: CTGACTTTGAAGGTCACCTCACGGAGGACAGCAGTG...GCACAGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp GGGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCCCTGTAACATTGCTCTaGTCACCCAGGGCCCGACCT +
Preference number: 4 (lower is better)
Translates to: GQPNGLYPGNPSSKTRRVPVTLL*SPRARP
Trigger: AGGTCGGGCCCTGGGTGATCAGAGCAATGTTACAGG...GACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp GTGACAGGTGGTGACCCTGGAGCCAGATCTGGAAGGCCTTCCTGGGGGCTGCCCGTAGGAGGAGAGATGTaGAAAGCAAGATGCGTTTGC +
Preference number: 4 (lower is better)
Translates to: VTGGDPGARSGRPSWGLPVGGEM*KARCVC
Trigger: GCAAACGCATCTTGCTTTTCACATCTCTCCTCCTAC...GGGCAGCCCCCAGGAAGGCCTTCCAGATCTGGCTCCAGGGTCACCACCTGTCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR TCA 90 bp GCCTTGGGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAATGCTGTGACAGGTGGTaGCCCTGGAGCCAGATCTGG +
Preference number: 4 (lower is better)
Translates to: ALGSPMGYTQETPPARPECCDRW*PWSQIW
Trigger: CCAGATCTGGCTCCAGGGTCACCACCTGTCACAGCA...TTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCCCAAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp GGGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCTCCCAGGTATTGCTGTaGCAGGTGGTGACCCTGGAG +
Preference number: 4 (lower is better)
Translates to: GQPNGLYPGNPSSKTRRVSQVLL*QVVTLE
Trigger: CTCCAGGGTCACCACCTGTCACAGCAATACCTGGGA...GACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp AAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGGTATTGCTGTGACAGGTGCTTTCCCGCTCTGCTaGGGGACTGAGACAGGACCG +
Preference number: 4 (lower is better)
Translates to: KGASQSQESMVPGIAVTGAFPLC*GTETGP
Trigger: CGGTCCTGTCTCAGTCCCTCAGCAGAGCGGGAAAGC...ACCTGTCACAGCAATACCTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375687.10
ENST00000613218.4
ENST00000651418.1
CDS-3UTR TCA 90 bp CAGAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTACCCAACTCCCCCGGGTaGATGAACGAAGCTGCCCCA +
Preference number: 4 (lower is better)
Translates to: QREEEDWTCLGPCSRSLVPNSPG*MNEAAP
Trigger: TGGGGCAGCTTCGTTCATTCACCCGGGGGAGTTGGG...TACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000646985.1
CDS-3UTR GCA 90 bp GGGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGGATGGCGAGACCACTaGAGGGCATCCTTCTTGAGC +
Preference number: 4 (lower is better)
Translates to: GQPNGLYPGNPSSKTRRVGWRDH*RASFLS
Trigger: GCTCAAGAAGGATGCCCTGCAGTGGTCTCGCCATCC...GACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp CTTGGTGGAGAATGCAACCTTCTTGCTTCAGTTTCAAGTCCCTCTGGGAGTCAGGGGCCAGAGAGCCGCTaGTGCTGCTGGACGGGCTGC +
Preference number: 4 (lower is better)
Translates to: LGGECNLLASVSSPSGSQGPESR*CCWTGC
Trigger: GCAGCCCGTCCAGCAGCAGCAGCGGCTCTCTGGCCC...CTGACTCCCAGAGGGACTTGAAACTGAAGCAAGAAGGTTGCATTCTCCACCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
CDS-3UTR GCA 90 bp AGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCCAAGTGACAGAGGGCTTTAGCGGGACTGCTCAGCCCTaGTGGGTCAGTCTTAGCCTC +
Preference number: 4 (lower is better)
Translates to: RKPLQQDQKGRQVTEGFSGTAQP*WVSLSL
Trigger: GAGGCTAAGACTGACCCAGCAGGGCTGAGCAGTCCC...GCTAAAGCCCTCTGTCACTTGGCGACCCTTCTGGTCTTGCTGGAGGGGTTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GGCTGCCCAGGGAACTCACCCATGAATCCAGAAGCACTTAACACTGGTGGTGGTCTGGCAGATGGGGACTaGTCAGCCCTGCTGGGTCAG +
Preference number: 4 (lower is better)
Translates to: GCPGNSPMNPEALNTGGGLADGD*SALLGQ
Trigger: CTGACCCAGCAGGGCTGAGCAGTCCCCATCTGCCAG...ACCACCACCAGTGTTAAGTGCTTCTGGATTCATGGGTGAGTTCCCTGGGCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR GCA 90 bp GGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCTGGCAGATGGGGACTaGTCAGCCCTGCTGGGTCAG +
Preference number: 4 (lower is better)
Translates to: GDPTGHRATWQVTSQSFHLADGD*SALLGQ
Trigger: CTGACCCAGCAGGGCTGAGCAGTCCCCATCTGCCAG...GTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR GCA 90 bp GGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACACTCCAGGTCGGGTGCTaGAGAGGATGTGCCTGGCAG +
Preference number: 4 (lower is better)
Translates to: GQPGRSQVNHFTLTSSSTLQVGC*RGCAWQ
Trigger: CTGCCAGGCACATCCTCTGCAGCACCCGACCTGGAG...TGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR GCA 90 bp GACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTACCCTCCAGGTCGGGTaGTGCAGAGGATGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: DPTGHRATWQVTSQSFHPTLQVG*CRGCAW
Trigger: CCAGGCACATCCTCTGCAGCACCCGACCTGGAGGGT...AGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR GCA 90 bp GAGATGCCCACTCCCATAGGGTCCAAAGTGACAGGGAGGATGTCAAGCAGAGGAACCCTCCAGGTCGGGTaGTGCAGAGGATGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: EMPTPIGSKVTGRMSSRGTLQVG*CRGCAW
Trigger: CCAGGCACATCCTCTGCAGCACCCGACCTGGAGGGT...TCCTCTGCTTGACATCCTCCCTGTCACTTTGGACCCTATGGGAGTGGGCATCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACACCCTCCAGGTCGGGTaGTGCAGAGGATGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: GDPTGHRATWQVTSQSFHTLQVG*CRGCAW
Trigger: CCAGGCACATCCTCTGCAGCACCCGACCTGGAGGGT...GTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR GCA 90 bp CCAGCAGAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTCTCGCCCCTCGGACCTaGAGAGCACGGGCTTTAATG +
Preference number: 4 (lower is better)
Translates to: PAEGRRGLDMFGPLFPVFLAPRT*RARALM
Trigger: CATTAAAGCCCGTGCTCTGCAGGTCCGAGGGGCGAG...AAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTCTGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACACACTGCTGCTGCCTCTaGCACCTCCCTCATCGGTGG +
Preference number: 4 (lower is better)
Translates to: GQPGRSQVNHFTLTSSSTHCCCL*HLPHRW
Trigger: CCACCGATGAGGGAGGTGGCAGAGGCAGCAGCAGTG...TGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp CAGGTCCAGCCGGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCCATGTAAAGATCCCATaGGTAGCGAGCCATGGCTCT +
Preference number: 4 (lower is better)
Translates to: QVQPVTQQGIGQPGRSQVHVKIP*VASHGS
Trigger: AGAGCCATGGCTCGCTACGCATGGGATCTTTACATG...GACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACCGGCTGGACCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp TCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGAGGGCCCGACCTGTCTaGTCTGGACCAAAGGAGATC +
Preference number: 4 (lower is better)
Translates to: SAGAPAPWWAMPGVTLTLRARPV*SGPKEI
Trigger: GATCTCCTTTGGTCCAGAGCAGACAGGTCGGGCCCT...CAGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp CAGGTCCAGCCGGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAGTTCCAGGGGACTATaGCCAGTAGCTTTCCTGTTC +
Preference number: 4 (lower is better)
Translates to: QVQPVTQQGIGQPGRSQVSSRGL*PVAFLF
Trigger: GAACAGGAAAGCTACTGGGCATAGTCCCCTGGAACT...GACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACCGGCTGGACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGTGCGCTTTGTGGCTCAGCTaGACCACACTTCCAGCAAGG +
Preference number: 4 (lower is better)
Translates to: AGAPAPWWAMPGVTLTLCALWLS*TTLPAR
Trigger: CCTTGCTGGAAGTGTGGTGCAGCTGAGCCACAAAGC...GCACAGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp AGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTAAACGGCCTTCCTGGGGGCTaGCCAGGGAACTCACCCATG +
Preference number: 4 (lower is better)
Translates to: REEEDWTCLGPCSRSLVNGLPGG*PGNSPM
Trigger: CATGGGTGAGTTCCCTGGGCAGCCCCCAGGAAGGCC...GTTTACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp AGGTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCTCCCTCCACTGTAGCTaGATGGCGAGACCACTGCAG +
Preference number: 4 (lower is better)
Translates to: RSAGAPAPWWAMPGVTLTSLHCS*MARPLQ
Trigger: CTGCAGTGGTCTCGCCATCCAGCTACAGTGGAGGGA...GGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGTCCCTCCACTGTAGCTaGATGGCGAGACCACTGCAG +
Preference number: 4 (lower is better)
Translates to: GSPMGYTQETPPARPEGSSLHCS*MARPLQ
Trigger: CTGCAGTGGTCTCGCCATCCAGCTACAGTGGAGGGA...CGACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp TCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGTCCCTCCACTGTAGCTaGATGGCGAGACCACTGCAG +
Preference number: 4 (lower is better)
Translates to: SAGAPAPWWAMPGVTLTLSLHCS*MARPLQ
Trigger: CTGCAGTGGTCTCGCCATCCAGCTACAGTGGAGGGA...CAGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GGGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCATCAGCCGTGTCCTCTaGCTCCTCTCCCTCCACTGT +
Preference number: 4 (lower is better)
Translates to: GQPNGLYPGNPSSKTRRVISRVL*LLSLHC
Trigger: ACAGTGGAGGGAGAGGAGCCAGAGGACACGGCTGAT...GACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GGCTGCCCAGGGAACTCACCCATGAATCCAGAAGCACTTAACACTGGTGGTGGTCTCTCGCCATCGGCGTaGCAGCCCGAGAACCCTGAT +
Preference number: 4 (lower is better)
Translates to: GCPGNSPMNPEALNTGGGLSPSA*QPENPD
Trigger: ATCAGGGTTCTCGGGCTGCCACGCCGATGGCGAGAG...ACCACCACCAGTGTTAAGTGCTTCTGGATTCATGGGTGAGTTCCCTGGGCAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000651418.1
CDS-3UTR CCA 90 bp GACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTTGGGTGACCTCGGCCTaGCCACGAATAGCAGCGCTG +
Preference number: 4 (lower is better)
Translates to: DPTGHRATWQVTSQSFHPWVTSA*PRIAAL
Trigger: CAGCGCTGCTATTCGTGGCCAGGCCGAGGTCACCCA...AGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000651418.1
CDS-3UTR CCA 90 bp CAGAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTATGGGTGACCTCGGCCTaGCCACGAATAGCAGCGCTG +
Preference number: 4 (lower is better)
Translates to: QREEEDWTCLGPCSRSLVWVTSA*PRIAAL
Trigger: CAGCGCTGCTATTCGTGGCCAGGCCGAGGTCACCCA...TACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000651418.1
CDS-3UTR CCA 90 bp AGGTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCATCTCGCTGTCGGGTaGCTGGACCACGCTGTATAC +
Preference number: 4 (lower is better)
Translates to: RSAGAPAPWWAMPGVTLTHLAVG*LDHAVY
Trigger: GTATACAGCGTGGTCCAGCCACCCGACAGCGAGATG...GGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GTGACAGGTGGTGACCCTGGAGCCAGATCTGGAAGGCCTTCCTGGGGGCTGCCCTCTGGTTCGGAGATCTaGCCGAGAGCGTTTCTTAAA +
Preference number: 4 (lower is better)
Translates to: VTGGDPGARSGRPSWGLPSGSEI*PRAFLK
Trigger: TTTAAGAAACGCTCTCGGCCAGATCTCCGAACCAGA...GGGCAGCCCCCAGGAAGGCCTTCCAGATCTGGCTCCAGGGTCACCACCTGTCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp GCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCCAAGATGTGCCTGGCAGATaGGGACTGCTCAGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: AQWVIPRKPLQQDQKGRQDVPGR*GLLSPA
Trigger: AGCAGGGCTGAGCAGTCCCCATCTGCCAGGCACATC...TTGGCGACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCCAACTCCGATGGCAGTGGTaGCCGCCTCTCTATGGCAGT +
Preference number: 4 (lower is better)
Translates to: AQWVIPRKPLQQDQKGRQLRWQW*PPLYGS
Trigger: ACTGCCATAGAGAGGCGGCCACCACTGCCATCGGAG...TTGGCGACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CAAGTGACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCTGCTCGGGCCTCCCCTaGGCTCAGGGTGGCCACAGG +
Preference number: 4 (lower is better)
Translates to: QVTEGFSSVNFGGRQECSCSGLP*AQGGHR
Trigger: CCTGTGGCCACCCTGAGCCCAGGGGAGGCCCGAGCA...GGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGTCACTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp AGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCCAAGTGACAGAGGGCTTTAGCGGAGCAACGGGGAGTTaGGAGGCATCTCCTAGCCCA +
Preference number: 4 (lower is better)
Translates to: RKPLQQDQKGRQVTEGFSGATGS*EASPSP
Trigger: TGGGCTAGGAGATGCCTCCCAACTCCCCGTTGCTCC...GCTAAAGCCCTCTGTCACTTGGCGACCCTTCTGGTCTTGCTGGAGGGGTTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACAAGGCCTGGCATGGCTaGTCCCCAGTGGGAGCAACG +
Preference number: 4 (lower is better)
Translates to: GDPTGHRATWQVTSQSFHKAWHG*SPVGAT
Trigger: CGTTGCTCCCACTGGGGACCAGCCATGCCAGGCCTT...GTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GAGAATGCAACCTTCTTGCTTCAGTTTCAAGTCCCTCTGGGAGTCAGGCAGTCCGGGCAAGGCCTGGCATaGCTGGTCCCCAGTGGGAGC +
Preference number: 4 (lower is better)
Translates to: ENATFLLQFQVPLGVRQSGQGLA*LVPSGS
Trigger: GCTCCCACTGGGGACCAGCCATGCCAGGCCTTGCCC...GGACTGCCTGACTCCCAGAGGGACTTGAAACTGAAGCAAGAAGGTTGCATTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp TCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGGCAATGCAGGAGGGGTaGGAGCAGCTTTCTCCCACT +
Preference number: 4 (lower is better)
Translates to: SAGAPAPWWAMPGVTLTLAMQEG*EQLSPT
Trigger: AGTGGGAGAAAGCTGCTCCCACCCCTCCTGCATTGC...CAGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGCAATGCAGGAGGGGTaGGAGCAGCTTTCTCCCACT +
Preference number: 4 (lower is better)
Translates to: VSRCTSPLVGNARSYFNPAMQEG*EQLSPT
Trigger: AGTGGGAGAAAGCTGCTCCCACCCCTCCTGCATTGC...AGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CCAGCCGGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCACAGAGGCTGTATCCGTaGACTCACCGTGAGGACTCA +
Preference number: 4 (lower is better)
Translates to: PAGDPTGHRATWQVTSQSQRLYP*THREDS
Trigger: TGAGTCCTCACGGTGAGTCCACGGATACAGCCTCTG...TGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACCGGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp AGGTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCACACGGCTCTTGGCTaGTACTCAGTACTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: RSAGAPAPWWAMPGVTLTHTALG*YSVLAS
Trigger: GCTGGCCAGTACTGAGTACCAGCCAAGAGCCGTGTG...GGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGCTGAGGACCCAGGCATaGACAGGCACACGGCTCTTG +
Preference number: 4 (lower is better)
Translates to: QGIGQPGRSQVNHFTLTSLRTQA*TGTRLL
Trigger: CAAGAGCCGTGTGCCTGTCCATGCCTGGGTCCTCAG...CGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTAGAGCTCAGGCTGGCTaGCCTTGGGCAGCCCAATGG +
Preference number: 4 (lower is better)
Translates to: DPTGHRATWQVTSQSFHPRAQAG*PWAAQW
Trigger: CCATTGGGCTGCCCAAGGCCAGCCAGCCTGAGCTCT...AGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GAGATGCCCACTCCCATAGGGTCCAAAGTGACAGGGAGGATGTCAAGCAGAGGAAGAGCTCAGGCTGGCTaGCCTTGGGCAGCCCAATGG +
Preference number: 4 (lower is better)
Translates to: EMPTPIGSKVTGRMSSRGRAQAG*PWAAQW
Trigger: CCATTGGGCTGCCCAAGGCCAGCCAGCCTGAGCTCT...TCCTCTGCTTGACATCCTCCCTGTCACTTTGGACCCTATGGGAGTGGGCATCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CCAGCCGGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCAGGGCATCGGGCAACCTaGCAGGTCACAAGTCAATCA +
Preference number: 4 (lower is better)
Translates to: PAGDPTGHRATWQVTSQSGHRAT*QVTSQS
Trigger: TGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCC...TGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACCGGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR TCA 90 bp GGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACAGCACTCAGTGCAGCCCGAGAACCCTaGTGCAGATTCCACGTGGGC +
Preference number: 4 (lower is better)
Translates to: GRSQVNHFTLTSSSTALSAAREP*CRFHVG
Trigger: GCCCACGTGGAATCTGCATCAGGGTTCTCGGGCTGC...ACTGAGTGCTGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
CDS-3UTR TCA 90 bp CTTTCACATACACAGGTGCGTGGAGATGCCCACTCCCATAGGGTCCAAAGTGACGCAGCCCGAGAACCCTaGTGCAGATTCCACGTGGGC +
Preference number: 4 (lower is better)
Translates to: LSHTQVRGDAHSHRVQSDAAREP*CRFHVG
Trigger: GCCCACGTGGAATCTGCATCAGGGTTCTCGGGCTGC...GTCACTTTGGACCCTATGGGAGTGGGCATCTCCACGCACCTGTGTATGTGAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
CDS-3UTR TCA 90 bp CAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGCTGTTGCGCTTCATTTaGCCTGTGGCTGGCTTCCGG +
Preference number: 4 (lower is better)
Translates to: QGIGQPGRSQVNHFTLTSLLRFI*PVAGFR
Trigger: CCGGAAGCCAGCCACAGGTCAAATGAAGCGCAACAG...CGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000651418.1
CDS-3UTR TCA 90 bp GCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCCAACTGTTGCGCTTCATTTaGCCTGTGGCTGGCTTCCGG +
Preference number: 4 (lower is better)
Translates to: AQWVIPRKPLQQDQKGRQLLRFI*PVAGFR
Trigger: CCGGAAGCCAGCCACAGGTCAAATGAAGCGCAACAG...TTGGCGACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
CDS-3UTR TCA 90 bp AGGTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCACGGAGGTTGGTGTTaGCAAGAATGGACCCAGGTG +
Preference number: 4 (lower is better)
Translates to: RSAGAPAPWWAMPGVTLTHGGWC*QEWTQV
Trigger: CACCTGGGTCCATTCTTGTCAACACCAACCTCCGTG...GGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp GGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACGGAAGGTCCGAGAGTTaGTCAGGGCACGGAGGTTGG +
Preference number: 4 (lower is better)
Translates to: GDPTGHRATWQVTSQSFHGRSES*SGHGGW
Trigger: CCAACCTCCGTGCCCTGATCAACTCTCGGACCTTCC...GTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR TCA 90 bp GGCTGCCCAGGGAACTCACCCATGAATCCAGAAGCACTTAACACTGGTGGTGGTGGAAGGTCCGAGAGTTaGTCAGGGCACGGAGGTTGG +
Preference number: 4 (lower is better)
Translates to: GCPGNSPMNPEALNTGGGGRSES*SGHGGW
Trigger: CCAACCTCCGTGCCCTGATCAACTCTCGGACCTTCC...ACCACCACCAGTGTTAAGTGCTTCTGGATTCATGGGTGAGTTCCCTGGGCAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR TCA 90 bp GCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCCAATTAGTGCACTGCTGCTaGGACGCAACAGGCCATCCG +
Preference number: 4 (lower is better)
Translates to: AQWVIPRKPLQQDQKGRQLVHCC*DATGHP
Trigger: CGGATGGCCTGTTGCGTCTCAGCAGCAGTGCACTAA...TTGGCGACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp AGGTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCGTGTTACGAAAGGACTaGCGATCTTCAAGCCGGGGC +
Preference number: 4 (lower is better)
Translates to: RSAGAPAPWWAMPGVTLTVLRKD*RSSSRG
Trigger: GCCCCGGCTTGAAGATCGTCAGTCCTTTCGTAACAC...GGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp GCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGTGCCAGGCAATCAGTCGGTaGGGATTCAGGTGTGGAACT +
Preference number: 4 (lower is better)
Translates to: AGAPAPWWAMPGVTLTLCQAISR*GFRCGT
Trigger: AGTTCCACACCTGAATCCTCACCGACTGATTGCCTG...GCACAGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp CAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGTCCGTGGACTCACCGTaGGGACTCAGTGCTTCAGAG +
Preference number: 4 (lower is better)
Translates to: QGIGQPGRSQVNHFTLTSSVDSP*GLSASE
Trigger: CTCTGAAGCACTGAGTCCTCACGGTGAGTCCACGGA...CGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp AGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCCAAGTGACAGAGGGCTTTAGCTCCGTGGACTCACCGTaGGGACTCAGTGCTTCAGAG +
Preference number: 4 (lower is better)
Translates to: RKPLQQDQKGRQVTEGFSSVDSP*GLSASE
Trigger: CTCTGAAGCACTGAGTCCTCACGGTGAGTCCACGGA...GCTAAAGCCCTCTGTCACTTGGCGACCCTTCTGGTCTTGCTGGAGGGGTTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp AGGTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCACTGCTGTCCTCCGTaGGGTGACCTTCAAAGTCAG +
Preference number: 4 (lower is better)
Translates to: RSAGAPAPWWAMPGVTLTHCCPP*GDLQSQ
Trigger: CTGACTTTGAAGGTCACCTCACGGAGGACAGCAGTG...GGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp CAGAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTAGTTAGTGGCCTCCACTaGGGACCCAGGCATGGACAG +
Preference number: 4 (lower is better)
Translates to: QREEEDWTCLGPCSRSLVVSGLH*GPRHGQ
Trigger: CTGTCCATGCCTGGGTCCTCAGTGGAGGCCACTAAC...TACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp GTGACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCTGCGCAGGCCTGGGGCGCTaGAGGGTTGCAGCCACATTC +
Preference number: 4 (lower is better)
Translates to: VTEGFSSVNFGGRQECSCAGLGR*RVAATF
Trigger: GAATGTGGCTGCAACCCTTCAGCGCCCCAGGCCTGC...GCAGGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGTCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp GAGATGCCCACTCCCATAGGGTCCAAAGTGACAGGGAGGATGTCAAGCAGAGGAGGCATCCCTTCCAAGTaGCCCACCAGTTCCAGGGGA +
Preference number: 4 (lower is better)
Translates to: EMPTPIGSKVTGRMSSRGGIPSK*PTSSRG
Trigger: TCCCCTGGAACTGGTGGGTCACTTGGAAGGGATGCC...TCCTCTGCTTGACATCCTCCCTGTCACTTTGGACCCTATGGGAGTGGGCATCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp GCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGTGCAGAAGGGCAAGTCCATaGCAAAGGGCATCCCTTCCA +
Preference number: 4 (lower is better)
Translates to: AGAPAPWWAMPGVTLTLCRRASP*QRASLP
Trigger: TGGAAGGGATGCCCTTTGTCATGGACTTGCCCTTCT...GCACAGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp AGGTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCGCGCTTCATTTGACCTaGTGCAGATTCCACGTGGGC +
Preference number: 4 (lower is better)
Translates to: RSAGAPAPWWAMPGVTLTALHLT*CRFHVG
Trigger: GCCCACGTGGAATCTGCATCAGGTCAAATGAAGCGC...GGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646985.1
CDS-3UTR GCA 90 bp GCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCCAAGGATGGCGAGACCACTaGAGGGCATCCTTCTTGAGC +
Preference number: 4 (lower is better)
Translates to: AQWVIPRKPLQQDQKGRQGWRDH*RASFLS
Trigger: GCTCAAGAAGGATGCCCTGCAGTGGTCTCGCCATCC...TTGGCGACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp AGGTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCAGATGCAGAGGCACGTaGCAAGTTGTCTGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: RSAGAPAPWWAMPGVTLTRCRGT*QVVWLS
Trigger: GCTGAGCCAGACAACTTGGCACGTGCCTCTGCATCT...GGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGTGCGATGCAGAGGCCGCCTaGTCAAAGGATTTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: AGAPAPWWAMPGVTLTLCDAEAA*SKDFLF
Trigger: GAAGAGGAAATCCTTTGAGCAGGCGGCCTCTGCATC...GCACAGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp CCAGCCGGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCACTTTTCGGGAAAGGATaGAGAGGCCGCCTGCTCAAA +
Preference number: 4 (lower is better)
Translates to: PAGDPTGHRATWQVTSQSLFGKG*RGRLLK
Trigger: TTTGAGCAGGCGGCCTCTGCATCCTTTCCCGAAAAG...TGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACCGGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR GCA 90 bp GCCTTGGGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAACGGGCTTTAATGTCTaGGAGGGTCCTGGCGCCAGT +
Preference number: 4 (lower is better)
Translates to: ALGSPMGYTQETPPARPETGFNV*EGPGAS
Trigger: ACTGGCGCCAGGACCCTCGCAGACATTAAAGCCCGT...TTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCCCAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp CTTTCACATACACAGGTGCGTGGAGATGCCCACTCCCATAGGGTCCAAAGTGACTACACTTTCCAGGGGTaGTCGGGCCTCCCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: LSHTQVRGDAHSHRVQSDYTFQG*SGLPWA
Trigger: AGCCCAGGGGAGGCCCGAGCACCCCTGGAAAGTGTA...GTCACTTTGGACCCTATGGGAGTGGGCATCTCCACGCACCTGTGTATGTGAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp AGGTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCGTGGGGATTCTGACATaGTGTCATCGTGGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: RSAGAPAPWWAMPGVTLTVGILT*CHRGLV
Trigger: CACCAGCCCACGATGACAGCATGTCAGAATCCCCAC...GGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGGTGGGGATTCTGACATaGTGTCATCGTGGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: GSPMGYTQETPPARPEGSVGILT*CHRGLV
Trigger: CACCAGCCCACGATGACAGCATGTCAGAATCCCCAC...CGACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GTGACAGGTGGTGACCCTGGAGCCAGATCTGGAAGGCCTTCCTGGGGGCTGCCCGTCAAAACTTGGGACTaGCTTGCAATTCTTTTGGGG +
Preference number: 4 (lower is better)
Translates to: VTGGDPGARSGRPSWGLPVKTWD*LAILLG
Trigger: CCCCAAAAGAATTGCAAGGCAGTCCCAAGTTTTGAC...GGGCAGCCCCCAGGAAGGCCTTCCAGATCTGGCTCCAGGGTCACCACCTGTCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCCAAAGGGCCCGACCTGTCTaGTCTGGACCAAAGGAGATC +
Preference number: 4 (lower is better)
Translates to: AQWVIPRKPLQQDQKGRQRARPV*SGPKEI
Trigger: GATCTCCTTTGGTCCAGAGCAGACAGGTCGGGCCCT...TTGGCGACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGTCATGGCTTTCAGGCTaGACGCACACTGGAGCGAGA +
Preference number: 4 (lower is better)
Translates to: GSPMGYTQETPPARPEGSSWLSG*THTGAR
Trigger: TCTCGCTCCAGTGTGCGTGCAGCCTGAAAGCCATGA...CGACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCCAACATCAGGCTCTGTCTTaGAGGAGAGCTCAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: AQWVIPRKPLQQDQKGRQHQALS*RRAQAG
Trigger: GCCAGCCTGAGCTCTCCTGCAAGACAGAGCCTGATG...TTGGCGACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp TCAATCATTTCACCCTCACGTCGAGCAGCACAGCACTCAGTGGCTCTGACAACAGGCCTTCCTGGGGGCTaGCCAGGGAACTCACCCATG +
Preference number: 4 (lower is better)
Translates to: SIISPSRRAAQHSVALTTGLPGG*PGNSPM
Trigger: CATGGGTGAGTTCCCTGGGCAGCCCCCAGGAAGGCC...TGTTGTCAGAGCCACTGAGTGCTGTGCTGCTCGACGTGAGGGTGAAATGATTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp TCAGACACAAGCTGTAGACTAACAGACCACTCCCAAGCTTACAGCAGGTTCATACGGCGCCCGGGTGCGTaGGTGTCTGCCGTGGGTGTG +
Preference number: 4 (lower is better)
Translates to: SDTSCRLTDHSQAYSRFIRRPGA*VSAVGV
Trigger: CACACCCACGGCAGACACGCACGCACCCGGGCGCCG...TATGAACCTGCTGTAAGCTTGGGAGTGGTCTGTTAGTCTACAGCTTGTGTCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542461.5
CDS-3UTR CCA 90 bp AGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTAAACCTCTCGCCATCGGCGTaGCAGCCCGAGAACCCTGAT +
Preference number: 4 (lower is better)
Translates to: REEEDWTCLGPCSRSLVNLSPSA*QPENPD
Trigger: ATCAGGGTTCTCGGGCTGCCACGCCGATGGCGAGAG...GTTTACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000651418.1
CDS-3UTR CCA 90 bp GGGGGTAGTGGAAGACTGGCATTTCTACTTAGTTCAGGTAGGTTAACTCCCTTGAGCCGCTGCTGCTGCTaGACGGGCTGCCGCTCTCGC +
Preference number: 4 (lower is better)
Translates to: GGSGRLAFLLSSGRLTPLSRCCC*TGCRSR
Trigger: GCGAGAGCGGCAGCCCGTCCAGCAGCAGCAGCGGCT...CAAGGGAGTTAACCTACCTGAACTAAGTAGAAATGCCAGTCTTCCACTACCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
CDS-3UTR CCA 90 bp CAGGTCCAGCCGGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCTGTGATGGTAAGGCATaGAAGGTCCGAGAGTTGATC +
Preference number: 4 (lower is better)
Translates to: QVQPVTQQGIGQPGRSQVCDGKA*KVRELI
Trigger: GATCAACTCTCGGACCTTCCATGCCTTACCATCACA...GACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACCGGCTGGACCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp GGGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGATTCCTTCTGGCTCTaGTTCGGAGATCTGGCCGAG +
Preference number: 4 (lower is better)
Translates to: GQPNGLYPGNPSSKTRRVDSFWL*FGDLAE
Trigger: CTCGGCCAGATCTCCGAACCAGAGCCAGAAGGAATC...GACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CAGGTCCAGCCGGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCCTCTTTAGTGGGCTGTaGCTTTTCGGTGTGAACACT +
Preference number: 4 (lower is better)
Translates to: QVQPVTQQGIGQPGRSQVLFSGL*LFGVNT
Trigger: AGTGTTCACACCGAAAAGCCACAGCCCACTAAAGAG...GACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACCGGCTGGACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp AAAAGTACGTCAAAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGGTATTTGTCTGCGAGGGTCCTaGCGCCAGTCCAACCCCGGC +
Preference number: 4 (lower is better)
Translates to: KSTSKGASQSQESMVPGICLRGS*RQSNPG
Trigger: GCCGGGGTTGGACTGGCGCCAGGACCCTCGCAGACA...AATACCTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTTTGACGTACTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp GACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCTCCGATGGCAGTGGTaGCCGCCTCTCTATGGCAGT +
Preference number: 4 (lower is better)
Translates to: DPTGHRATWQVTSQSFHPLRWQW*PPLYGS
Trigger: ACTGCCATAGAGAGGCGGCCACCACTGCCATCGGAG...AGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp TCAATCATTTCACCCTCACGTCGAGCAGCACAGCACTCAGTGGCTCTGACAACACCCCTCCGATGGCAGTaGTGGCCGCCTCTCTATGGC +
Preference number: 4 (lower is better)
Translates to: SIISPSRRAAQHSVALTTPLRWQ*WPPLYG
Trigger: GCCATAGAGAGGCGGCCACCACTGCCATCGGAGGGG...TGTTGTCAGAGCCACTGAGTGCTGTGCTGCTCGACGTGAGGGTGAAATGATTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp TGTAGGAGGAGAGATGTGAAAAGCAAGATGCGTTTGCTCGGTGGCATGTGGGCACCCCTCCGATGGCAGTaGTGGCCGCCTCTCTATGGC +
Preference number: 4 (lower is better)
Translates to: CRRRDVKSKMRLLGGMWAPLRWQ*WPPLYG
Trigger: GCCATAGAGAGGCGGCCACCACTGCCATCGGAGGGG...TGCCCACATGCCACCGAGCAAACGCATCTTGCTTTTCACATCTCTCCTCCTACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp AAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGGTATTGCTGTGACAGGTCTGAGGACCCAGGCATaGACAGGCACACGGCTCTTG +
Preference number: 4 (lower is better)
Translates to: KGASQSQESMVPGIAVTGLRTQA*TGTRLL
Trigger: CAAGAGCCGTGTGCCTGTCCATGCCTGGGTCCTCAG...ACCTGTCACAGCAATACCTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GAGATGCCCACTCCCATAGGGTCCAAAGTGACAGGGAGGATGTCAAGCAGAGGACTGAGGACCCAGGCATaGACAGGCACACGGCTCTTG +
Preference number: 4 (lower is better)
Translates to: EMPTPIGSKVTGRMSSRGLRTQA*TGTRLL
Trigger: CAAGAGCCGTGTGCCTGTCCATGCCTGGGTCCTCAG...TCCTCTGCTTGACATCCTCCCTGTCACTTTGGACCCTATGGGAGTGGGCATCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CAGGTCCAGCCGGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAGCGAGCCATGGCTCTaGTCTTTTGTAAGTGGTACT +
Preference number: 4 (lower is better)
Translates to: QVQPVTQQGIGQPGRSQVSEPWL*SFVSGT
Trigger: AGTACCACTTACAAAAGACCAGAGCCATGGCTCGCT...GACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACCGGCTGGACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp AGGTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCGCCTTGCAATTCTTTTaGGGTGCTCCAGGAGCCTGG +
Preference number: 4 (lower is better)
Translates to: RSAGAPAPWWAMPGVTLTALQFF*GAPGAW
Trigger: CCAGGCTCCTGGAGCACCCCAAAAGAATTGCAAGGC...GGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CCAGCCGGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCAGGTAGTAAGATCTCCTaGGCTCTTTCCTGGAGCAGC +
Preference number: 4 (lower is better)
Translates to: PAGDPTGHRATWQVTSQSGSKIS*ALSWSS
Trigger: GCTGCTCCAGGAAAGAGCCCAGGAGATCTTACTACC...TGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACCGGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGTGCCCCACTGGGAAAAACTaGAGGGATCTCAGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: AGAPAPWWAMPGVTLTLCPTGKN*RDLSRK
Trigger: CTTCCTGCTGAGATCCCTCCAGTTTTTCCCAGTGGG...GCACAGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTAGCCCAGTCTTCCCTTaGAGTCTGTACCCCACCAGA +
Preference number: 4 (lower is better)
Translates to: VSRCTSPLVGNARSYFNPSPVFP*SLYPTR
Trigger: TCTGGTGGGGTACAGACTCCAAGGGAAGACTGGGCT...AGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CCAGCCGGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCAAAAGGCATGTGGCTTTaGAGCCCAGTCTTCCCTTGG +
Preference number: 4 (lower is better)
Translates to: PAGDPTGHRATWQVTSQSKGMWL*SPVFPW
Trigger: CCAAGGGAAGACTGGGCTCCAAAGCCACATGCCTTT...TGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACCGGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGTGCTGCTTGATGCTGAGTTaGGAGGGGAGAGAAGAAGGC +
Preference number: 4 (lower is better)
Translates to: AGAPAPWWAMPGVTLTLCCLMLS*EGREEG
Trigger: GCCTTCTTCTCTCCCCTCCCAACTCAGCATCAAGCA...GCACAGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp AGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCCAAGTGACAGAGGGCTTTAGCAGGCTGCACGCACACTaGAGCGAGATGCTTTCCACC +
Preference number: 4 (lower is better)
Translates to: RKPLQQDQKGRQVTEGFSRLHAH*SEMLST
Trigger: GGTGGAAAGCATCTCGCTCCAGTGTGCGTGCAGCCT...GCTAAAGCCCTCTGTCACTTGGCGACCCTTCTGGTCTTGCTGGAGGGGTTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCCAAAGGCTGCACGCACACTaGAGCGAGATGCTTTCCACC +
Preference number: 4 (lower is better)
Translates to: AQWVIPRKPLQQDQKGRQRLHAH*SEMLST
Trigger: GGTGGAAAGCATCTCGCTCCAGTGTGCGTGCAGCCT...TTGGCGACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGTGCAAGCAGTGCTTTCTCTaGGCAGCCTCATGGACCAGA +
Preference number: 4 (lower is better)
Translates to: AGAPAPWWAMPGVTLTLCKQCFL*AASWTR
Trigger: TCTGGTCCATGAGGCTGCCCAGAGAAAGCACTGCTT...GCACAGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCAGCACAGCACTCAGTaGCTCTGCAGAGCACGGGCT +
Preference number: 4 (lower is better)
Translates to: DPTGHRATWQVTSQSFHPQHSTQ*LCRARA
Trigger: AGCCCGTGCTCTGCAGAGCCACTGAGTGCTGTGCTG...AGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651418.1
CDS-3UTR TCA 90 bp GAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTAAAGGAAGGTCCGAGAGTTaGTCAGGGCACGGAGGTTGG +
Preference number: 4 (lower is better)
Translates to: EGRRGLDMFGPLFPVFGKGRSES*SGHGGW
Trigger: CCAACCTCCGTGCCCTGATCAACTCTCGGACCTTCC...TTTACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR TCA 90 bp TCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGCACACAAGCCACTTTTaGTTTCAGCCTCCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: SAGAPAPWWAMPGVTLTLHTSHF*FQPPPG
Trigger: GCCAGGAGGAGGCTGAAATCAAAAGTGGCTTGTGTG...CAGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp CCAGCCGGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCAACGCTGTATACGCACTaGTTCTCCTGGGACACACAA +
Preference number: 4 (lower is better)
Translates to: PAGDPTGHRATWQVTSQSTLYTH*FSWDTQ
Trigger: TTGTGTGTCCCAGGAGAATCAGTGCGTATACAGCGT...TGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACCGGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR TCA 90 bp AGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCCAAGTGACAGAGGGCTTTAGCGTGTTACGAAAGGACTaGCGATCTTCAAGCCGGGGC +
Preference number: 4 (lower is better)
Translates to: RKPLQQDQKGRQVTEGFSVLRKD*RSSSRG
Trigger: GCCCCGGCTTGAAGATCGTCAGTCCTTTCGTAACAC...GCTAAAGCCCTCTGTCACTTGGCGACCCTTCTGGTCTTGCTGGAGGGGTTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp GGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACATCCGTGGACTCACCGTaGGGACTCAGTGCTTCAGAG +
Preference number: 4 (lower is better)
Translates to: GQPGRSQVNHFTLTSSSTSVDSP*GLSASE
Trigger: CTCTGAAGCACTGAGTCCTCACGGTGAGTCCACGGA...TGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp GCCGGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCTGTCCTCCGTGAGGTaGCCTTCAAAGTCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: AGDPTGHRATWQVTSQSFLSSVR*PSKSEA
Trigger: AGCCTCTGACTTTGAAGGTCACCTCACGGAGGACAG...AAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACCGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp GGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACAGCACTCAGTGGCATCCCTTCCAAGTaGCCCACCAGTTCCAGGGGA +
Preference number: 4 (lower is better)
Translates to: GRSQVNHFTLTSSSTALSGIPSK*PTSSRG
Trigger: TCCCCTGGAACTGGTGGGTCACTTGGAAGGGATGCC...ACTGAGTGCTGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp CAAGTGACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCGCTCCAGAGGCTCACTaGGCCCCTTCCCTGGCTCTC +
Preference number: 4 (lower is better)
Translates to: QVTEGFSSVNFGGRQECSAPEAH*APSLAL
Trigger: GAGAGCCAGGGAAGGGGCTCAGTGAGCCTCTGGAGC...GGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGTCACTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp CTTGGTGGAGAATGCAACCTTCTTGCTTCAGTTTCAAGTCCCTCTGGGAGTCAGGCTCCAGAGGCTCACTaGGCCCCTTCCCTGGCTCTC +
Preference number: 4 (lower is better)
Translates to: LGGECNLLASVSSPSGSQAPEAH*APSLAL
Trigger: GAGAGCCAGGGAAGGGGCTCAGTGAGCCTCTGGAGC...CTGACTCCCAGAGGGACTTGAAACTGAAGCAAGAAGGTTGCATTCTCCACCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp CCAGCCGGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCACCGTGCTGCTGTCAGTaGACATTTGCAAGGAAAGTG +
Preference number: 4 (lower is better)
Translates to: PAGDPTGHRATWQVTSQSPCCCQ*TFARKV
Trigger: CACTTTCCTTGCAAATGTTCACTGACAGCAGCACGG...TGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACCGGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp AACAAGGCAAGGGAAAACACACACAGGGGCATCTACTTGCTGGAAACATGTTGGAGCAGGTCCAGCCGGTaGCCCAACAGGGCATCGGGC +
Preference number: 4 (lower is better)
Translates to: NKARENTHRGIYLLETCWSRSSR*PNRASG
Trigger: GCCCGATGCCCTGTTGGGTCACCGGCTGGACCTGCT...CCAACATGTTTCCAGCAAGTAGATGCCCCTGTGTGTGTTTTCCCTTGCCTTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR TCA 90 bp GACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTTCCCAGGTATTGCTGTaGCAGGTGGTGACCCTGGAG +
Preference number: 4 (lower is better)
Translates to: DPTGHRATWQVTSQSFHPSQVLL*QVVTLE
Trigger: CTCCAGGGTCACCACCTGTCACAGCAATACCTGGGA...AGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR TCA 90 bp TGTAGGAGGAGAGATGTGAAAAGCAAGATGCGTTTGCTCGGTGGCATGTGGGCAGCTTTCCCGCTCTGCTaGGGGACTGAGACAGGACCG +
Preference number: 4 (lower is better)
Translates to: CRRRDVKSKMRLLGGMWAAFPLC*GTETGP
Trigger: CGGTCCTGTCTCAGTCCCTCAGCAGAGCGGGAAAGC...TGCCCACATGCCACCGAGCAAACGCATCTTGCTTTTCACATCTCTCCTCCTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375687.10
ENST00000613218.4
ENST00000651418.1
CDS-3UTR TCA 90 bp TCCTCTCCCTCCACTGTAGCTGGATGGCGAGACCACTGCAGGGCATCCTTCTGTCATCCCAGTGCTTTGTaGAGCTGTGGTGGGAAGATC +
Preference number: 4 (lower is better)
Translates to: SSPSTVAGWRDHCRASFCHPSAL*SCGGKI
Trigger: GATCTTCCCACCACAGCTTCACAAAGCACTGGGATG...ACAGAAGGATGCCCTGCAGTGGTCTCGCCATCCAGCTACAGTGGAGGGAGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644587.1
CDS-3UTR GCA 90 bp GGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACAGGATGGCGAGACCACTaGAGGGCATCCTTCTTGAGC +
Preference number: 4 (lower is better)
Translates to: GQPGRSQVNHFTLTSSSTGWRDH*RASFLS
Trigger: GCTCAAGAAGGATGCCCTGCAGTGGTCTCGCCATCC...TGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR GCA 90 bp TCAATCATTTCACCCTCACGTCGAGCAGCACAGCACTCAGTGGCTCTGACAACACTGGCAGATGGGGACTaGTCAGCCCTGCTGGGTCAG +
Preference number: 4 (lower is better)
Translates to: SIISPSRRAAQHSVALTTLADGD*SALLGQ
Trigger: CTGACCCAGCAGGGCTGAGCAGTCCCCATCTGCCAG...TGTTGTCAGAGCCACTGAGTGCTGTGCTGCTCGACGTGAGGGTGAAATGATTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GTGACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCTGCCTCCAGGTCGGGTGCTaGAGAGGATGTGCCTGGCAG +
Preference number: 4 (lower is better)
Translates to: VTEGFSSVNFGGRQECSCLQVGC*RGCAWQ
Trigger: CTGCCAGGCACATCCTCTGCAGCACCCGACCTGGAG...GCAGGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGTCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGGATGCAGAGGCCGCCTaGTCAAAGGATTTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: GSPMGYTQETPPARPEGSDAEAA*SKDFLF
Trigger: GAAGAGGAAATCCTTTGAGCAGGCGGCCTCTGCATC...CGACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GAGATGCCCACTCCCATAGGGTCCAAAGTGACAGGGAGGATGTCAAGCAGAGGAACGGGCTTTAATGTCTaGGAGGGTCCTGGCGCCAGT +
Preference number: 4 (lower is better)
Translates to: EMPTPIGSKVTGRMSSRGTGFNV*EGPGAS
Trigger: ACTGGCGCCAGGACCCTCGCAGACATTAAAGCCCGT...TCCTCTGCTTGACATCCTCCCTGTCACTTTGGACCCTATGGGAGTGGGCATCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp TCAATCATTTCACCCTCACGTCGAGCAGCACAGCACTCAGTGGCTCTGACAACATACACTTTCCAGGGGTaGTCGGGCCTCCCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: SIISPSRRAAQHSVALTTYTFQG*SGLPWA
Trigger: AGCCCAGGGGAGGCCCGAGCACCCCTGGAAAGTGTA...TGTTGTCAGAGCCACTGAGTGCTGTGCTGCTCGACGTGAGGGTGAAATGATTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GAGAGGCAGGAGCAGGCATGGCTTTGTTTCTTCCCAAACCTGCCTGATGTCAAATACACTTTCCAGGGGTaGTCGGGCCTCCCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: ERQEQAWLCFFPNLPDVKYTFQG*SGLPWA
Trigger: AGCCCAGGGGAGGCCCGAGCACCCCTGGAAAGTGTA...TTTGACATCAGGCAGGTTTGGGAAGAAACAAAGCCATGCCTGCTCCTGCCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGACAGTAACTGCCATTaGTGTCACTGCCTCCTCGAG +
Preference number: 4 (lower is better)
Translates to: VSRCTSPLVGNARSYFNPDSNCH*CHCLLE
Trigger: CTCGAGGAGGCAGTGACAGCAATGGCAGTTACTGTC...AGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp TCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGAGGGGCAAGCTACCCTaGAGCAACTGCATCACAAGT +
Preference number: 4 (lower is better)
Translates to: SAGAPAPWWAMPGVTLTLRGKLP*SNCITS
Trigger: ACTTGTGATGCAGTTGCTGCAGGGTAGCTTGCCCCT...CAGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GCCGGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTGCTTTGTGGCTCAGCTaGACCACACTTCCAGCAAGG +
Preference number: 4 (lower is better)
Translates to: AGDPTGHRATWQVTSQSFALWLS*TTLPAR
Trigger: CCTTGCTGGAAGTGTGGTGCAGCTGAGCCACAAAGC...AAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACCGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GCCTTGGGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAATCATGGCTTTCAGGCTaGACGCACACTGGAGCGAGA +
Preference number: 4 (lower is better)
Translates to: ALGSPMGYTQETPPARPESWLSG*THTGAR
Trigger: TCTCGCTCCAGTGTGCGTGCAGCCTGAAAGCCATGA...TTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCCCAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACACGCAACCCCACTCCGTaGCACATCAGGCTCTGTCTT +
Preference number: 4 (lower is better)
Translates to: GQPGRSQVNHFTLTSSSTRNPTP*HIRLCL
Trigger: AAGACAGAGCCTGATGTGGCACGGAGTGGGGTTGCG...TGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp AAAAGTACGTCAAAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGGTATTGGCCTTCCTGGGGGCTaGCCAGGGAACTCACCCATG +
Preference number: 4 (lower is better)
Translates to: KSTSKGASQSQESMVPGIGLPGG*PGNSPM
Trigger: CATGGGTGAGTTCCCTGGGCAGCCCCCAGGAAGGCC...AATACCTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTTTGACGTACTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR GCA 90 bp CATGGCTTTGTTTCTTCCCAAACCTGCCTGATGTCAAAAGTACGTCAAAAGGAGCGGCGCCCGGGTGCGTaGGTGTCTGCCGTGGGTGTG +
Preference number: 4 (lower is better)
Translates to: HGFVSSQTCLMSKVRQKERRPGA*VSAVGV
Trigger: CACACCCACGGCAGACACGCACGCACCCGGGCGCCG...CTCCTTTTGACGTACTTTTGACATCAGGCAGGTTTGGGAAGAAACAAAGCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375687.10
ENST00000613218.4
ENST00000651418.1
CDS-3UTR GCA 90 bp AAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGGTATTGCTGTGACAGGTGTGAATGAACGAAGCTaGCCCAGACCCCCAGACGCT +
Preference number: 4 (lower is better)
Translates to: KGASQSQESMVPGIAVTGVNERS*PRPPDA
Trigger: AGCGTCTGGGGGTCTGGGGCAGCTTCGTTCATTCAC...ACCTGTCACAGCAATACCTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646985.1
CDS-3UTR CCA 90 bp GACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTTCCACTGTAGCTGGATaGCGAGACCACTGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: DPTGHRATWQVTSQSFHPSTVAG*RDHCRA
Trigger: TGCCCTGCAGTGGTCTCGCCATCCAGCTACAGTGGA...AGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp GGCTGCCCAGGGAACTCACCCATGAATCCAGAAGCACTTAACACTGGTGGTGGTTCCACTGTAGCTGGATaGCGAGACCACTGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: GCPGNSPMNPEALNTGGGSTVAG*RDHCRA
Trigger: TGCCCTGCAGTGGTCTCGCCATCCAGCTACAGTGGA...ACCACCACCAGTGTTAAGTGCTTCTGGATTCATGGGTGAGTTCCCTGGGCAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp GACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTATCAGCCGTGTCCTCTaGCTCCTCTCCCTCCACTGT +
Preference number: 4 (lower is better)
Translates to: DPTGHRATWQVTSQSFHPISRVL*LLSLHC
Trigger: ACAGTGGAGGGAGAGGAGCCAGAGGACACGGCTGAT...AGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp AAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGGTATTGCTGTGACAGGTATCAGCCGTGTCCTCTaGCTCCTCTCCCTCCACTGT +
Preference number: 4 (lower is better)
Translates to: KGASQSQESMVPGIAVTGISRVL*LLSLHC
Trigger: ACAGTGGAGGGAGAGGAGCCAGAGGACACGGCTGAT...ACCTGTCACAGCAATACCTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp TCCTCTCCCTCCACTGTAGCTGGATGGCGAGACCACTGCAGGGCATCCTTCTGTAGCTGTCCCTGGGATTaGAAAGAGGTCGACTCTGAG +
Preference number: 4 (lower is better)
Translates to: SSPSTVAGWRDHCRASFCSCPWD*KEVDSE
Trigger: CTCAGAGTCGACCTCTTTCCAATCCCAGGGACAGCT...ACAGAAGGATGCCCTGCAGTGGTCTCGCCATCCAGCTACAGTGGAGGGAGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644587.1
CDS-3UTR CCA 90 bp GGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCTCTGTAGCTGTCCCTaGGATTGGAAAGAGGTCGAC +
Preference number: 4 (lower is better)
Translates to: GSPMGYTQETPPARPEGSLCSCP*DWKEVD
Trigger: GTCGACCTCTTTCCAATCCCAGGGACAGCTACAGAG...CGACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CACGTGGGCCCCGTTTACCTTCAGAGGAGTCAGGACAACTCGAGGCAGCATCACCTCTGTAGCTGTCCCTaGGATTGGAAAGAGGTCGAC +
Preference number: 4 (lower is better)
Translates to: HVGPVYLQRSQDNSRQHHLCSCP*DWKEVD
Trigger: GTCGACCTCTTTCCAATCCCAGGGACAGCTACAGAG...GTGATGCTGCCTCGAGTTGTCCTGACTCCTCTGAAGGTAAACGGGGCCCACGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644587.1
CDS-3UTR CCA 90 bp TGTAGGAGGAGAGATGTGAAAAGCAAGATGCGTTTGCTCGGTGGCATGTGGGCACTCTCGCCATCGGCGTaGCAGCCCGAGAACCCTGAT +
Preference number: 4 (lower is better)
Translates to: CRRRDVKSKMRLLGGMWALSPSA*QPENPD
Trigger: ATCAGGGTTCTCGGGCTGCCACGCCGATGGCGAGAG...TGCCCACATGCCACCGAGCAAACGCATCTTGCTTTTCACATCTCTCCTCCTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000651418.1
CDS-3UTR CCA 90 bp GTGACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCTGCTGGGTGACCTCGGCCTaGCCACGAATAGCAGCGCTG +
Preference number: 4 (lower is better)
Translates to: VTEGFSSVNFGGRQECSCWVTSA*PRIAAL
Trigger: CAGCGCTGCTATTCGTGGCCAGGCCGAGGTCACCCA...GCAGGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGTCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
CDS-3UTR CCA 90 bp GCCTTGGGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGCTTCATTTGACCTGTaGCTGGCTTCCGGAAGCCTC +
Preference number: 4 (lower is better)
Translates to: ALGSPMGYTQETPPARPEASFDL*LASGSL
Trigger: GAGGCTTCCGGAAGCCAGCCACAGGTCAAATGAAGC...TTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCCCAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
CDS-3UTR CCA 90 bp GGGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCATTTCAGCCTCCTCCTaGCCCACGTTCTGCTGCAAT +
Preference number: 4 (lower is better)
Translates to: GQPNGLYPGNPSSKTRRVISASS*PTFCCN
Trigger: ATTGCAGCAGAACGTGGGCCAGGAGGAGGCTGAAAT...GACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp AGGTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCATTTCAGCCTCCTCCTaGCCCACGTTCTGCTGCAAT +
Preference number: 4 (lower is better)
Translates to: RSAGAPAPWWAMPGVTLTISASS*PTFCCN
Trigger: ATTGCAGCAGAACGTGGGCCAGGAGGAGGCTGAAAT...GGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp AGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCCAAGTGACAGAGGGCTTTAGCGATTCCTTCTGGCTCTaGTTCGGAGATCTGGCCGAG +
Preference number: 4 (lower is better)
Translates to: RKPLQQDQKGRQVTEGFSDSFWL*FGDLAE
Trigger: CTCGGCCAGATCTCCGAACCAGAGCCAGAAGGAATC...GCTAAAGCCCTCTGTCACTTGGCGACCCTTCTGGTCTTGCTGGAGGGGTTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp AGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTAAACACTGCTCAGCCCTGCTaGGTCAGTCTTAGCCTCCCC +
Preference number: 4 (lower is better)
Translates to: REEEDWTCLGPCSRSLVNTAQPC*VSLSLP
Trigger: GGGGAGGCTAAGACTGACCCAGCAGGGCTGAGCAGT...GTTTACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp CAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACAGCAGATGTGCCTGGCAGATaGGGACTGCTCAGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: QPGRSQVNHFTLTSSSTADVPGR*GLLSPA
Trigger: AGCAGGGCTGAGCAGTCCCCATCTGCCAGGCACATC...TGCTGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp GGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGGCTAGGAATTCTGTCTaGAGATGCAGAGGCACGTGC +
Preference number: 4 (lower is better)
Translates to: GSPMGYTQETPPARPEGSARNSV*RCRGTC
Trigger: GCACGTGCCTCTGCATCTCCAGACAGAATTCCTAGC...CGACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTAAAGTTGAATCCGGATaGGCGGGACTTTGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: VSRCTSPLVGNARSYFNPKVESG*AGLWAP
Trigger: AGGAGCCCAAAGTCCCGCCCATCCGGATTCAACTTT...AGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GGGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCATGGCAGTTCCGGCCTaGGTATGCTCCCCATTTAGA +
Preference number: 4 (lower is better)
Translates to: GQPNGLYPGNPSSKTRRVMAVPA*VCSPFR
Trigger: TCTAAATGGGGAGCATACCCAGGCCGGAACTGCCAT...GACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GTGACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCTGCAAGGCCTGGCATGGCTaGTCCCCAGTGGGAGCAACG +
Preference number: 4 (lower is better)
Translates to: VTEGFSSVNFGGRQECSCKAWHG*SPVGAT
Trigger: CGTTGCTCCCACTGGGGACCAGCCATGCCAGGCCTT...GCAGGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGTCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GTGACAGGTGGTGACCCTGGAGCCAGATCTGGAAGGCCTTCCTGGGGGCTGCCCCATCATTCGATGGGATaGGTATCCAATGCAAAGAAC +
Preference number: 4 (lower is better)
Translates to: VTGGDPGARSGRPSWGLPHHSMG*VSNAKN
Trigger: GTTCTTTGCATTGGATACCCATCCCATCGAATGATG...GGGCAGCCCCCAGGAAGGCCTTCCAGATCTGGCTCCAGGGTCACCACCTGTCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GGGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCTGGTACTCAGTACTaGCCAGCAGTAGGGAATCTG +
Preference number: 4 (lower is better)
Translates to: GQPNGLYPGNPSSKTRRVAGTQY*PAVGNL
Trigger: CAGATTCCCTACTGCTGGCCAGTACTGAGTACCAGC...GACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCACACGGCTCTTGGCTaGTACTCAGTACTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: GDPTGHRATWQVTSQSFHHTALG*YSVLAS
Trigger: GCTGGCCAGTACTGAGTACCAGCCAAGAGCCGTGTG...GTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GGCTGCCCAGGGAACTCACCCATGAATCCAGAAGCACTTAACACTGGTGGTGGTCACACGGCTCTTGGCTaGTACTCAGTACTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: GCPGNSPMNPEALNTGGGHTALG*YSVLAS
Trigger: GCTGGCCAGTACTGAGTACCAGCCAAGAGCCGTGTG...ACCACCACCAGTGTTAAGTGCTTCTGGATTCATGGGTGAGTTCCCTGGGCAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCCAAGCCTTGCAATTCTTTTaGGGTGCTCCAGGAGCCTGG +
Preference number: 4 (lower is better)
Translates to: AQWVIPRKPLQQDQKGRQALQFF*GAPGAW
Trigger: CCAGGCTCCTGGAGCACCCCAAAAGAATTGCAAGGC...TTGGCGACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp AGGTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCCCACTGGGAAAAACTaGAGGGATCTCAGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: RSAGAPAPWWAMPGVTLTPTGKN*RDLSRK
Trigger: CTTCCTGCTGAGATCCCTCCAGTTTTTCCCAGTGGG...GGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GGGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGTACCCCACCAGACATaGAGTTTGTGCTTGGTCCCA +
Preference number: 4 (lower is better)
Translates to: GQPNGLYPGNPSSKTRRVVPHQT*SLCLVP
Trigger: TGGGACCAAGCACAAACTCCATGTCTGGTGGGGTAC...GACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGAAAGGCATGTGGCTTTaGAGCCCAGTCTTCCCTTGG +
Preference number: 4 (lower is better)
Translates to: GSPMGYTQETPPARPEGSKGMWL*SPVFPW
Trigger: CCAAGGGAAGACTGGGCTCCAAAGCCACATGCCTTT...CGACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGCCAACAAAGGCATGTaGCTTTGGAGCCCAGTCTTC +
Preference number: 4 (lower is better)
Translates to: VSRCTSPLVGNARSYFNPANKGM*LWSPVF
Trigger: GAAGACTGGGCTCCAAAGCCACATGCCTTTGTTGGC...AGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GGGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCTGCTTGATGCTGAGTTaGGAGGGGAGAGAAGAAGGC +
Preference number: 4 (lower is better)
Translates to: GQPNGLYPGNPSSKTRRVCLMLS*EGREEG
Trigger: GCCTTCTTCTCTCCCCTCCCAACTCAGCATCAAGCA...GACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GAGAATGCAACCTTCTTGCTTCAGTTTCAAGTCCCTCTGGGAGTCAGGCAGTCCAGAGCTCAGGCTGGCTaGCCTTGGGCAGCCCAATGG +
Preference number: 4 (lower is better)
Translates to: ENATFLLQFQVPLGVRQSRAQAG*PWAAQW
Trigger: CCATTGGGCTGCCCAAGGCCAGCCAGCCTGAGCTCT...GGACTGCCTGACTCCCAGAGGGACTTGAAACTGAAGCAAGAAGGTTGCATTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGTGCTCACCTGCAAACATCTaGACGGCTGACTCACAAGGT +
Preference number: 4 (lower is better)
Translates to: AGAPAPWWAMPGVTLTLCSPANI*TADSQG
Trigger: ACCTTGTGAGTCAGCCGTCCAGATGTTTGCAGGTGA...GCACAGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CCAGCAGAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGGCATCGGGCAACCTaGCAGGTCACAAGTCAATCA +
Preference number: 4 (lower is better)
Translates to: PAEGRRGLDMFGPLFPVFGHRAT*QVTSQS
Trigger: TGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCC...AAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTCTGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp CCAGCCGGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCAAGGCAGGAGCAGGCATaGCTTTGTTTCTTCCCAAAC +
Preference number: 4 (lower is better)
Translates to: PAGDPTGHRATWQVTSQSRQEQA*LCFFPN
Trigger: GTTTGGGAAGAAACAAAGCCATGCCTGCTCCTGCCT...TGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACCGGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR TCA 90 bp CAAGTGACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCGCAGCCCGAGAACCCTaGTGCAGATTCCACGTGGGC +
Preference number: 4 (lower is better)
Translates to: QVTEGFSSVNFGGRQECSAAREP*CRFHVG
Trigger: GCCCACGTGGAATCTGCATCAGGGTTCTCGGGCTGC...GGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGTCACTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
CDS-3UTR TCA 90 bp AGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTAAACCTGTTGCGCTTCATTTaGCCTGTGGCTGGCTTCCGG +
Preference number: 4 (lower is better)
Translates to: REEEDWTCLGPCSRSLVNLLRFI*PVAGFR
Trigger: CCGGAAGCCAGCCACAGGTCAAATGAAGCGCAACAG...GTTTACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000651418.1
CDS-3UTR TCA 90 bp GGCTGCCCAGGGAACTCACCCATGAATCCAGAAGCACTTAACACTGGTGGTGGTCACGGAGGTTGGTGTTaGCAAGAATGGACCCAGGTG +
Preference number: 4 (lower is better)
Translates to: GCPGNSPMNPEALNTGGGHGGWC*QEWTQV
Trigger: CACCTGGGTCCATTCTTGTCAACACCAACCTCCGTG...ACCACCACCAGTGTTAAGTGCTTCTGGATTCATGGGTGAGTTCCCTGGGCAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR TCA 90 bp CTTCCTGGGGGCTGCCCAGGGAACTCACCCATGAATCCAGAAGCACTTAACACTCACGGAGGTTGGTGTTaGCAAGAATGGACCCAGGTG +
Preference number: 4 (lower is better)
Translates to: LPGGCPGNSPMNPEALNTHGGWC*QEWTQV
Trigger: CACCTGGGTCCATTCTTGTCAACACCAACCTCCGTG...AGTGTTAAGTGCTTCTGGATTCATGGGTGAGTTCCCTGGGCAGCCCCCAGGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR TCA 90 bp AAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGGTATTGCTGTGACAGGTCACGGAGGTTGGTGTTaGCAAGAATGGACCCAGGTG +
Preference number: 4 (lower is better)
Translates to: KGASQSQESMVPGIAVTGHGGWC*QEWTQV
Trigger: CACCTGGGTCCATTCTTGTCAACACCAACCTCCGTG...ACCTGTCACAGCAATACCTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR TCA 90 bp CTTTCACATACACAGGTGCGTGGAGATGCCCACTCCCATAGGGTCCAAAGTGACTTAGTGCACTGCTGCTaGGACGCAACAGGCCATCCG +
Preference number: 4 (lower is better)
Translates to: LSHTQVRGDAHSHRVQSDLVHCC*DATGHP
Trigger: CGGATGGCCTGTTGCGTCTCAGCAGCAGTGCACTAA...GTCACTTTGGACCCTATGGGAGTGGGCATCTCCACGCACCTGTGTATGTGAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp AGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTAAACTTAGTGCACTGCTGCTaGGACGCAACAGGCCATCCG +
Preference number: 4 (lower is better)
Translates to: REEEDWTCLGPCSRSLVNLVHCC*DATGHP
Trigger: CGGATGGCCTGTTGCGTCTCAGCAGCAGTGCACTAA...GTTTACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR TCA 90 bp GCCGGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACACAAGCCACTTTTaGTTTCAGCCTCCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: AGDPTGHRATWQVTSQSFHTSHF*FQPPPG
Trigger: GCCAGGAGGAGGCTGAAATCAAAAGTGGCTTGTGTG...AAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACCGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR TCA 90 bp GTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTACGCTGTATACGCACTaGTTCTCCTGGGACACACAA +
Preference number: 4 (lower is better)
Translates to: VSRCTSPLVGNARSYFNPTLYTH*FSWDTQ
Trigger: TTGTGTGTCCCAGGAGAATCAGTGCGTATACAGCGT...AGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp GGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGGTAGAGGGGAACATCTaGGGCCACAGATTTTGCATC +
Preference number: 4 (lower is better)
Translates to: GSPMGYTQETPPARPEGSVEGNI*GHRFCI
Trigger: GATGCAAAATCTGTGGCCTCAGATGTTCCCCTCTAC...CGACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp AGGTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCGGGTGGTTTGATACGTaGAAGTTGAATCCGGATGGG +
Preference number: 4 (lower is better)
Translates to: RSAGAPAPWWAMPGVTLTGWFDT*KLNPDG
Trigger: CCCATCCGGATTCAACTTTCACGTATCAAACCACCC...GGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp TCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGCCACCCAGGGTGGTTTaGTACGTGAAAGTTGAATCC +
Preference number: 4 (lower is better)
Translates to: SAGAPAPWWAMPGVTLTLPPRVV*YVKVES
Trigger: GGATTCAACTTTCACGTATCAAACCACCCTGGGTGG...CAGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp TCAATCATTTCACCCTCACGTCGAGCAGCACAGCACTCAGTGGCTCTGACAACAACTCCGTGGTGGGGATaGTCCGGGGGCATATCTGGT +
Preference number: 4 (lower is better)
Translates to: SIISPSRRAAQHSVALTTTPWWG*SGGISG
Trigger: ACCAGATATGCCCCCGGATCATCCCCACCACGGAGT...TGTTGTCAGAGCCACTGAGTGCTGTGCTGCTCGACGTGAGGGTGAAATGATTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp GCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCCAAACATCCGGATGCAACTaGGGCTGCTCCACTAATCTC +
Preference number: 4 (lower is better)
Translates to: AQWVIPRKPLQQDQKGRQTSGCN*GCSTNL
Trigger: GAGATTAGTGGAGCAGCCTCAGTTGCATCCGGATGT...TTGGCGACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp GCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCCAATGGCACAGTCCAGAGTaGAGTAAGGCTGTCAAGAGG +
Preference number: 4 (lower is better)
Translates to: AQWVIPRKPLQQDQKGRQWHSPE*SKAVKR
Trigger: CCTCTTGACAGCCTTACTTCACTCTGGACTGTGCCA...TTGGCGACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp GCCTTGGGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAATGGCACAGTCCAGAGTaGAGTAAGGCTGTCAAGAGG +
Preference number: 4 (lower is better)
Translates to: ALGSPMGYTQETPPARPEWHSPE*SKAVKR
Trigger: CCTCTTGACAGCCTTACTTCACTCTGGACTGTGCCA...TTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCCCAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp GGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCTGTCCTCCGTGAGGTaGCCTTCAAAGTCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: GDPTGHRATWQVTSQSFHLSSVR*PSKSEA
Trigger: AGCCTCTGACTTTGAAGGTCACCTCACGGAGGACAG...GTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp GAGAATGCAACCTTCTTGCTTCAGTTTCAAGTCCCTCTGGGAGTCAGGCAGTCCGTTAGTGGCCTCCACTaGGGACCCAGGCATGGACAG +
Preference number: 4 (lower is better)
Translates to: ENATFLLQFQVPLGVRQSVSGLH*GPRHGQ
Trigger: CTGTCCATGCCTGGGTCCTCAGTGGAGGCCACTAAC...GGACTGCCTGACTCCCAGAGGGACTTGAAACTGAAGCAAGAAGGTTGCATTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp CAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACAGCACCTGTAACATTGCTCTaGTCACCCAGGGCCCGACCT +
Preference number: 4 (lower is better)
Translates to: QPGRSQVNHFTLTSSSTAPVTLL*SPRARP
Trigger: AGGTCGGGCCCTGGGTGATCAGAGCAATGTTACAGG...TGCTGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp CAGGTCCAGCCGGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCATTCAAGGTTCCAAATaGTCCTGTGGGTTAGTGGAT +
Preference number: 4 (lower is better)
Translates to: QVQPVTQQGIGQPGRSQVIQGSK*SCGLVD
Trigger: ATCCACTAACCCACAGGATCATTTGGAACCTTGAAT...GACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACCGGCTGGACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp GCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGTGCAAACATCTGGACGGCTaGCTCACAAGGTCTACAGAT +
Preference number: 4 (lower is better)
Translates to: AGAPAPWWAMPGVTLTLCKHLDG*LTRSTD
Trigger: ATCTGTAGACCTTGTGAGTCAGCCGTCCAGATGTTT...GCACAGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp CCGGTCTTTGGTAAACAGACGCTTAAGTTGACAACTTGGACTTGGCCAATACTGAGCAGGTCCAGCCGGTaGCCCAACAGGGCATCGGGC +
Preference number: 4 (lower is better)
Translates to: PVFGKQTLKLTTWTWPILSRSSR*PNRASG
Trigger: GCCCGATGCCCTGTTGGGTCACCGGCTGGACCTGCT...CAGTATTGGCCAAGTCCAAGTTGTCAACTTAAGCGTCTGTTTACCAAAGACCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR TCA 90 bp TCAGACACAAGCTGTAGACTAACAGACCACTCCCAAGCTTACAGCAGGTTCATAGCTCTGCTGAGGGACTaGGACAGGACCGACGGCGGG +
Preference number: 4 (lower is better)
Translates to: SDTSCRLTDHSQAYSRFIALLRD*DRTDGG
Trigger: CCCGCCGTCGGTCCTGTCTCAGTCCCTCAGCAGAGC...TATGAACCTGCTGTAAGCTTGGGAGTGGTCTGTTAGTCTACAGCTTGTGTCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542461.5
ENST00000646367.1
CDS-3UTR TCA 90 bp TGTAATCCATCCCAGTGCTTTGTGAAGCTGTGGTGGGAAGATCACTTGAGGCCAACTCCCCCGGGTGAATaGACGAAGCTGCCCCAGACC +
Preference number: 4 (lower is better)
Translates to: CNPSQCFVKLWWEDHLRPTPPGE*TKLPQT
Trigger: GGTCTGGGGCAGCTTCGTTCATTCACCCGGGGGAGT...TGGCCTCAAGTGATCTTCCCACCACAGCTTCACAAAGCACTGGGATGGATTACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000645035.1
ENST00000649901.1
CDS-3UTR TCA 90 bp ACCTGTAATCCATCCCAGTGCTTTGTGAAGCTGTGGTGGGAAGATCACTTGAGGCCCAACTCCCCCGGGTaGATGAACGAAGCTGCCCCA +
Preference number: 4 (lower is better)
Translates to: TCNPSQCFVKLWWEDHLRPNSPG*MNEAAP
Trigger: TGGGGCAGCTTCGTTCATTCACCCGGGGGAGTTGGG...CCTCAAGTGATCTTCCCACCACAGCTTCACAAAGCACTGGGATGGATTACAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000645035.1
ENST00000649901.1
CDS-3UTR GCA 90 bp GGGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCAGGAAGAGGAGCTGCTaGTGGAAGTGTGATGGTAAG +
Preference number: 4 (lower is better)
Translates to: GQPNGLYPGNPSSKTRRVRKRSC*WKCDGK
Trigger: CTTACCATCACACTTCCAGCAGCAGCTCCTCTTCCT...GACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp TCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGGAGCGTTTCTTAAAATaGCCATCTCGCTGTCGGGTG +
Preference number: 4 (lower is better)
Translates to: SAGAPAPWWAMPGVTLTLERFLK*PSRCRV
Trigger: CACCCGACAGCGAGATGGGCATTTTAAGAAACGCTC...CAGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp TCAATCATTTCACCCTCACGTCGAGCAGCACAGCACTCAGTGGCTCTGACAACAGGGACTGCTCAGCCCTaGTGGGTCAGTCTTAGCCTC +
Preference number: 4 (lower is better)
Translates to: SIISPSRRAAQHSVALTTGTAQP*WVSLSL
Trigger: GAGGCTAAGACTGACCCAGCAGGGCTGAGCAGTCCC...TGTTGTCAGAGCCACTGAGTGCTGTGCTGCTCGACGTGAGGGTGAAATGATTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp CAAGGCAAGGGAAAACACACACAGGGGCATCTACTTGCTGGAAACATGTTGGGACTGGCAGATGGGGACTaGTCAGCCCTGCTGGGTCAG +
Preference number: 4 (lower is better)
Translates to: QGKGKHTQGHLLAGNMLGLADGD*SALLGQ
Trigger: CTGACCCAGCAGGGCTGAGCAGTCCCCATCTGCCAG...TCCCAACATGTTTCCAGCAAGTAGATGCCCCTGTGTGTGTTTTCCCTTGCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR GCA 90 bp AAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGGTATTGCTGTGACAGGTAGATGCAGAGGCACGTaGCAAGTTGTCTGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: KGASQSQESMVPGIAVTGRCRGT*QVVWLS
Trigger: GCTGAGCCAGACAACTTGGCACGTGCCTCTGCATCT...ACCTGTCACAGCAATACCTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR GCA 90 bp GGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACAAGATGCAGAGGCACGTaGCAAGTTGTCTGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: GQPGRSQVNHFTLTSSSTRCRGT*QVVWLS
Trigger: GCTGAGCCAGACAACTTGGCACGTGCCTCTGCATCT...TGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR GCA 90 bp CAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGCTTTTCGGGAAAGGATaGAGAGGCCGCCTGCTCAAA +
Preference number: 4 (lower is better)
Translates to: QGIGQPGRSQVNHFTLTSLFGKG*RGRLLK
Trigger: TTTGAGCAGGCGGCCTCTGCATCCTTTCCCGAAAAG...CGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR GCA 90 bp GAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTAAAACGGGCTTTAATGTCTaGGAGGGTCCTGGCGCCAGT +
Preference number: 4 (lower is better)
Translates to: EGRRGLDMFGPLFPVFGKTGFNV*EGPGAS
Trigger: ACTGGCGCCAGGACCCTCGCAGACATTAAAGCCCGT...TTTACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR GCA 90 bp AAAAGTACGTCAAAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGGTATTCACTGCTGCTGCCTCTaGCACCTCCCTCATCGGTGG +
Preference number: 4 (lower is better)
Translates to: KSTSKGASQSQESMVPGIHCCCL*HLPHRW
Trigger: CCACCGATGAGGGAGGTGGCAGAGGCAGCAGCAGTG...AATACCTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTTTGACGTACTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp CAAGTGACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCTACACTTTCCAGGGGTaGTCGGGCCTCCCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: QVTEGFSSVNFGGRQECSYTFQG*SGLPWA
Trigger: AGCCCAGGGGAGGCCCGAGCACCCCTGGAAAGTGTA...GGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGTCACTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GGGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCCCTGTTGACAGTAACTaGCATTGCTGTCACTGCCTC +
Preference number: 4 (lower is better)
Translates to: GQPNGLYPGNPSSKTRRVPVDSN*HCCHCL
Trigger: GAGGCAGTGACAGCAATGGCAGTTACTGTCAACAGG...GACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp TCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGACCGTGAGGACTCAGTaGTTCAGAGTCTCCGTTGAT +
Preference number: 4 (lower is better)
Translates to: SAGAPAPWWAMPGVTLTLTVRTQ*FRVSVD
Trigger: ATCAACGGAGACTCTGAAGCACTGAGTCCTCACGGT...CAGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTCTACCCTGCAGCAACTaGATCACAAGTGGGTTAGTG +
Preference number: 4 (lower is better)
Translates to: VSRCTSPLVGNARSYFNPLPCSN*ITSGLV
Trigger: CACTAACCCACTTGTGATGCAGTTGCTGCAGGGTAG...AGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp AGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCCAAGTGACAGAGGGCTTTAGCAGGGGCAAGCTACCCTaGAGCAACTGCATCACAAGT +
Preference number: 4 (lower is better)
Translates to: RKPLQQDQKGRQVTEGFSRGKLP*SNCITS
Trigger: ACTTGTGATGCAGTTGCTGCAGGGTAGCTTGCCCCT...GCTAAAGCCCTCTGTCACTTGGCGACCCTTCTGGTCTTGCTGGAGGGGTTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTAGTTCCAGGGGACTATaGCCAGTAGCTTTCCTGTTC +
Preference number: 4 (lower is better)
Translates to: VSRCTSPLVGNARSYFNPSSRGL*PVAFLF
Trigger: GAACAGGAAAGCTACTGGGCATAGTCCCCTGGAACT...AGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GAGATGCCCACTCCCATAGGGTCCAAAGTGACAGGGAGGATGTCAAGCAGAGGACACACTGGAGCGAGATaGTTTCCACCGTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: EMPTPIGSKVTGRMSSRGHTGAR*FPPCCC
Trigger: ACAGCAGCACGGTGGAAAGCATCTCGCTCCAGTGTG...TCCTCTGCTTGACATCCTCCCTGTCACTTTGGACCCTATGGGAGTGGGCATCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp CTTCCTGGGGGCTGCCCAGGGAACTCACCCATGAATCCAGAAGCACTTAACACTCACACTGGAGCGAGATaGTTTCCACCGTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: LPGGCPGNSPMNPEALNTHTGAR*FPPCCC
Trigger: ACAGCAGCACGGTGGAAAGCATCTCGCTCCAGTGTG...AGTGTTAAGTGCTTCTGGATTCATGGGTGAGTTCCCTGGGCAGCCCCCAGGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACAGCACTCAGTCATCAGGCTCTGTCTTaGAGGAGAGCTCAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: GRSQVNHFTLTSSSTALSHQALS*RRAQAG
Trigger: GCCAGCCTGAGCTCTCCTGCAAGACAGAGCCTGATG...ACTGAGTGCTGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp CTTTCACATACACAGGTGCGTGGAGATGCCCACTCCCATAGGGTCCAAAGTGACCATCAGGCTCTGTCTTaGAGGAGAGCTCAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: LSHTQVRGDAHSHRVQSDHQALS*RRAQAG
Trigger: GCCAGCCTGAGCTCTCCTGCAAGACAGAGCCTGATG...GTCACTTTGGACCCTATGGGAGTGGGCATCTCCACGCACCTGTGTATGTGAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp CAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAAAGCAAGATGCGTTTaGTCGGTGGCATGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: QGIGQPGRSQVNHFTLTSKARCV*SVACGQ
Trigger: CTGCCCACATGCCACCGAGCAAACGCATCTTGCTTT...CGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR GCA 90 bp ACCTGTAATCCATCCCAGTGCTTTGTGAAGCTGTGGTGGGAAGATCACTTGAGGCAGACCCCCAGACGCTaGCAAATAGTGGGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: TCNPSQCFVKLWWEDHLRQTPRR*QIVGEG
Trigger: CCCCTCCCCCACTATTTGGCAGCGTCTGGGGGTCTG...CCTCAAGTGATCTTCCCACCACAGCTTCACAAAGCACTGGGATGGATTACAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000645035.1
ENST00000649901.1
CDS-3UTR GCA 90 bp CAAGGCAAGGGAAAACACACACAGGGGCATCTACTTGCTGGAAACATGTTGGGACAGACCCCCAGACGCTaGCAAATAGTGGGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: QGKGKHTQGHLLAGNMLGQTPRR*QIVGEG
Trigger: CCCCTCCCCCACTATTTGGCAGCGTCTGGGGGTCTG...TCCCAACATGTTTCCAGCAAGTAGATGCCCCTGTGTGTGTTTTCCCTTGCCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000646985.1
CDS-3UTR CCA 90 bp GTCAAAAGTACGTCAAAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGGTTCCCTCCACTGTAGCTaGATGGCGAGACCACTGCAG +
Preference number: 4 (lower is better)
Translates to: VKSTSKGASQSQESMVPGSLHCS*MARPLQ
Trigger: CTGCAGTGGTCTCGCCATCCAGCTACAGTGGAGGGA...ACCTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTTTGACGTACTTTTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp CAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACAGCATCCCTCCACTGTAGCTaGATGGCGAGACCACTGCAG +
Preference number: 4 (lower is better)
Translates to: QPGRSQVNHFTLTSSSTASLHCS*MARPLQ
Trigger: CTGCAGTGGTCTCGCCATCCAGCTACAGTGGAGGGA...TGCTGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp AGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCCAAGTGACAGAGGGCTTTAGCAGCTGTCCCTGGGATTaGAAAGAGGTCGACTCTGAG +
Preference number: 4 (lower is better)
Translates to: RKPLQQDQKGRQVTEGFSSCPWD*KEVDSE
Trigger: CTCAGAGTCGACCTCTTTCCAATCCCAGGGACAGCT...GCTAAAGCCCTCTGTCACTTGGCGACCCTTCTGGTCTTGCTGGAGGGGTTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GCCTTGGGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAACTCTGTAGCTGTCCCTaGGATTGGAAAGAGGTCGAC +
Preference number: 4 (lower is better)
Translates to: ALGSPMGYTQETPPARPELCSCP*DWKEVD
Trigger: GTCGACCTCTTTCCAATCCCAGGGACAGCTACAGAG...TTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCCCAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp AGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCCAAGTGACAGAGGGCTTTAGCGATGCAGATTCCACGTaGGCCCCGTTTACCTTCAGA +
Preference number: 4 (lower is better)
Translates to: RKPLQQDQKGRQVTEGFSDADST*APFTFR
Trigger: TCTGAAGGTAAACGGGGCCCACGTGGAATCTGCATC...GCTAAAGCCCTCTGTCACTTGGCGACCCTTCTGGTCTTGCTGGAGGGGTTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp TTCATTAGACCCACAGCTCTCCACATCAGCCGTGTCCTCTGGCTCCTCTCCCTCGATGCAGATTCCACGTaGGCCCCGTTTACCTTCAGA +
Preference number: 4 (lower is better)
Translates to: FIRPTALHISRVLWLLSLDADST*APFTFR
Trigger: TCTGAAGGTAAACGGGGCCCACGTGGAATCTGCATC...GAGGGAGAGGAGCCAGAGGACACGGCTGATGTGGAGAGCTGTGGGTCTAATGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644587.1
CDS-3UTR CCA 90 bp TTTGTTTCTTCCCAAACCTGCCTGATGTCAAAAGTACGTCAAAAGGAGCCTCACAGCCGCTGCTGCTGCTaGACGGGCTGCCGCTCTCGC +
Preference number: 4 (lower is better)
Translates to: FVSSQTCLMSKVRQKEPHSRCCC*TGCRSR
Trigger: GCGAGAGCGGCAGCCCGTCCAGCAGCAGCAGCGGCT...GTGAGGCTCCTTTTGACGTACTTTTGACATCAGGCAGGTTTGGGAAGAAACAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000651418.1
CDS-3UTR CCA 90 bp GAGATGCCCACTCCCATAGGGTCCAAAGTGACAGGGAGGATGTCAAGCAGAGGACATTTGACCTGTGGCTaGCTTCCGGAAGCCTCTCAG +
Preference number: 4 (lower is better)
Translates to: EMPTPIGSKVTGRMSSRGHLTCG*LPEASQ
Trigger: CTGAGAGGCTTCCGGAAGCCAGCCACAGGTCAAATG...TCCTCTGCTTGACATCCTCCCTGTCACTTTGGACCCTATGGGAGTGGGCATCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
CDS-3UTR CCA 90 bp CTTCCTGGGGGCTGCCCAGGGAACTCACCCATGAATCCAGAAGCACTTAACACTCATTTGACCTGTGGCTaGCTTCCGGAAGCCTCTCAG +
Preference number: 4 (lower is better)
Translates to: LPGGCPGNSPMNPEALNTHLTCG*LPEASQ
Trigger: CTGAGAGGCTTCCGGAAGCCAGCCACAGGTCAAATG...AGTGTTAAGTGCTTCTGGATTCATGGGTGAGTTCCCTGGGCAGCCCCCAGGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000651418.1
CDS-3UTR CCA 90 bp GACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTGCTTCATTTGACCTGTaGCTGGCTTCCGGAAGCCTC +
Preference number: 4 (lower is better)
Translates to: DPTGHRATWQVTSQSFHPASFDL*LASGSL
Trigger: GAGGCTTCCGGAAGCCAGCCACAGGTCAAATGAAGC...AGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000651418.1
CDS-3UTR CCA 90 bp GCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCCAAATTTCAGCCTCCTCCTaGCCCACGTTCTGCTGCAAT +
Preference number: 4 (lower is better)
Translates to: AQWVIPRKPLQQDQKGRQISASS*PTFCCN
Trigger: ATTGCAGCAGAACGTGGGCCAGGAGGAGGCTGAAAT...TTGGCGACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp AGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTAAACCATCTCGCTGTCGGGTaGCTGGACCACGCTGTATAC +
Preference number: 4 (lower is better)
Translates to: REEEDWTCLGPCSRSLVNHLAVG*LDHAVY
Trigger: GTATACAGCGTGGTCCAGCCACCCGACAGCGAGATG...GTTTACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp CAGAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTAGATTCCTTCTGGCTCTaGTTCGGAGATCTGGCCGAG +
Preference number: 4 (lower is better)
Translates to: QREEEDWTCLGPCSRSLVDSFWL*FGDLAE
Trigger: CTCGGCCAGATCTCCGAACCAGAGCCAGAAGGAATC...TACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp TGTAGGAGGAGAGATGTGAAAAGCAAGATGCGTTTGCTCGGTGGCATGTGGGCAACTGCTCAGCCCTGCTaGGTCAGTCTTAGCCTCCCC +
Preference number: 4 (lower is better)
Translates to: CRRRDVKSKMRLLGGMWATAQPC*VSLSLP
Trigger: GGGGAGGCTAAGACTGACCCAGCAGGGCTGAGCAGT...TGCCCACATGCCACCGAGCAAACGCATCTTGCTTTTCACATCTCTCCTCCTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp GACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTAGCCACAGACTCAACTaGGAATTCGGGACCCTCCAG +
Preference number: 4 (lower is better)
Translates to: DPTGHRATWQVTSQSFHPSHRLN*EFGTLQ
Trigger: CTGGAGGGTCCCGAATTCCCAGTTGAGTCTGTGGCT...AGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp GAGATGCCCACTCCCATAGGGTCCAAAGTGACAGGGAGGATGTCAAGCAGAGGAAGCCACAGACTCAACTaGGAATTCGGGACCCTCCAG +
Preference number: 4 (lower is better)
Translates to: EMPTPIGSKVTGRMSSRGSHRLN*EFGTLQ
Trigger: CTGGAGGGTCCCGAATTCCCAGTTGAGTCTGTGGCT...TCCTCTGCTTGACATCCTCCCTGTCACTTTGGACCCTATGGGAGTGGGCATCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCCAAGCTAGGAATTCTGTCTaGAGATGCAGAGGCACGTGC +
Preference number: 4 (lower is better)
Translates to: AQWVIPRKPLQQDQKGRQARNSV*RCRGTC
Trigger: GCACGTGCCTCTGCATCTCCAGACAGAATTCCTAGC...TTGGCGACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCCAAAAAGTTGAATCCGGATaGGCGGGACTTTGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: AQWVIPRKPLQQDQKGRQKVESG*AGLWAP
Trigger: AGGAGCCCAAAGTCCCGCCCATCCGGATTCAACTTT...TTGGCGACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp AGTTCAGGTAGGTTAACTCCCTTGGTGGAGAATGCAACCTTCTTGCTTCAGTTTCACCTCCCTCATCGGTaGCCCCGCCGCCACCTCCAC +
Preference number: 4 (lower is better)
Translates to: SSGRLTPLVENATFLLQFHLPHR*PRRHLH
Trigger: GTGGAGGTGGCGGCGGGGCCACCGATGAGGGAGGTG...AAACTGAAGCAAGAAGGTTGCATTCTCCACCAAGGGAGTTAACCTACCTGAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp ATGTCAAAAGTACGTCAAAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGGGAGCAACGGGGAGTTaGGAGGCATCTCCTAGCCCA +
Preference number: 4 (lower is better)
Translates to: MSKVRQKEPHSPRRAWSQGATGS*EASPSP
Trigger: TGGGCTAGGAGATGCCTCCCAACTCCCCGTTGCTCC...CTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTTTGACGTACTTTTGACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CTTGGTGGAGAATGCAACCTTCTTGCTTCAGTTTCAAGTCCCTCTGGGAGTCAGAAGGCCTGGCATGGCTaGTCCCCAGTGGGAGCAACG +
Preference number: 4 (lower is better)
Translates to: LGGECNLLASVSSPSGSQKAWHG*SPVGAT
Trigger: CGTTGCTCCCACTGGGGACCAGCCATGCCAGGCCTT...CTGACTCCCAGAGGGACTTGAAACTGAAGCAAGAAGGTTGCATTCTCCACCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CAAGTGACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCAAGGCCTGGCATGGCTaGTCCCCAGTGGGAGCAACG +
Preference number: 4 (lower is better)
Translates to: QVTEGFSSVNFGGRQECSKAWHG*SPVGAT
Trigger: CGTTGCTCCCACTGGGGACCAGCCATGCCAGGCCTT...GGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGTCACTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CAAGTGACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCAGTAGGGGCAAGGCCTaGCATGGCTGGTCCCCAGTG +
Preference number: 4 (lower is better)
Translates to: QVTEGFSSVNFGGRQECSSRGKA*HGWSPV
Trigger: CACTGGGGACCAGCCATGCCAGGCCTTGCCCCTACT...GGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGTCACTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CCAGCCGGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCAGTGAGGATTCAGGTGTaGAACTGGGGGTCACATTTA +
Preference number: 4 (lower is better)
Translates to: PAGDPTGHRATWQVTSQSVRIQV*NWGSHL
Trigger: TAAATGTGACCCCCAGTTCCACACCTGAATCCTCAC...TGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACCGGCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp AGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCCAAGTGACAGAGGGCTTTAGCCACTCCTCTCCAACCTaGGGCTCAACAGATGGTATG +
Preference number: 4 (lower is better)
Translates to: RKPLQQDQKGRQVTEGFSHSSPT*GSTDGM
Trigger: CATACCATCTGTTGAGCCCCAGGTTGGAGAGGAGTG...GCTAAAGCCCTCTGTCACTTGGCGACCCTTCTGGTCTTGCTGGAGGGGTTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp AAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGGTATTGCTGTGACAGGTCAGAGGCTGTATCCGTaGACTCACCGTGAGGACTCA +
Preference number: 4 (lower is better)
Translates to: KGASQSQESMVPGIAVTGQRLYP*THREDS
Trigger: TGAGTCCTCACGGTGAGTCCACGGATACAGCCTCTG...ACCTGTCACAGCAATACCTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCCAAGCTGGTACTCAGTACTaGCCAGCAGTAGGGAATCTG +
Preference number: 4 (lower is better)
Translates to: AQWVIPRKPLQQDQKGRQAGTQY*PAVGNL
Trigger: CAGATTCCCTACTGCTGGCCAGTACTGAGTACCAGC...TTGGCGACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGTGCATGCGTAGCGAGCCATaGCTCTGGTCTTTTGTAAGT +
Preference number: 4 (lower is better)
Translates to: AGAPAPWWAMPGVTLTLCMRSEP*LWSFVS
Trigger: ACTTACAAAAGACCAGAGCCATGGCTCGCTACGCAT...GCACAGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTGCCTTGCAATTCTTTTaGGGTGCTCCAGGAGCCTGG +
Preference number: 4 (lower is better)
Translates to: DPTGHRATWQVTSQSFHPALQFF*GAPGAW
Trigger: CCAGGCTCCTGGAGCACCCCAAAAGAATTGCAAGGC...AGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GAGATGCCCACTCCCATAGGGTCCAAAGTGACAGGGAGGATGTCAAGCAGAGGAGCCTTGCAATTCTTTTaGGGTGCTCCAGGAGCCTGG +
Preference number: 4 (lower is better)
Translates to: EMPTPIGSKVTGRMSSRGALQFF*GAPGAW
Trigger: CCAGGCTCCTGGAGCACCCCAAAAGAATTGCAAGGC...TCCTCTGCTTGACATCCTCCCTGTCACTTTGGACCCTATGGGAGTGGGCATCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCCAAGGTAGTAAGATCTCCTaGGCTCTTTCCTGGAGCAGC +
Preference number: 4 (lower is better)
Translates to: AQWVIPRKPLQQDQKGRQGSKIS*ALSWSS
Trigger: GCTGCTCCAGGAAAGAGCCCAGGAGATCTTACTACC...TTGGCGACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CTGGCATTTCTACTTAGTTCAGGTAGGTTAACTCCCTTGGTGGAGAATGCAACCTCGGGTCCGCAGGCCTaGGGCGCTGAAGGGTTGCAG +
Preference number: 4 (lower is better)
Translates to: LAFLLSSGRLTPLVENATSGPQA*GAEGLQ
Trigger: CTGCAACCCTTCAGCGCCCCAGGCCTGCGGACCCGA...GGTTGCATTCTCCACCAAGGGAGTTAACCTACCTGAACTAAGTAGAAATGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp AGTGGAAGACTGGCATTTCTACTTAGTTCAGGTAGGTTAACTCCCTTGGTGGAGTCGGGTCCGCAGGCCTaGGGCGCTGAAGGGTTGCAG +
Preference number: 4 (lower is better)
Translates to: SGRLAFLLSSGRLTPLVESGPQA*GAEGLQ
Trigger: CTGCAACCCTTCAGCGCCCCAGGCCTGCGGACCCGA...CTCCACCAAGGGAGTTAACCTACCTGAACTAAGTAGAAATGCCAGTCTTCCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CCAGCAGAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTCCCACTGGGAAAAACTaGAGGGATCTCAGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: PAEGRRGLDMFGPLFPVFPTGKN*RDLSRK
Trigger: CTTCCTGCTGAGATCCCTCCAGTTTTTCCCAGTGGG...AAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTCTGCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GGGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGTCCCAACTTCCCACTaGGAAAAACTGGAGGGATCT +
Preference number: 4 (lower is better)
Translates to: GQPNGLYPGNPSSKTRRVVPTSH*EKLEGS
Trigger: AGATCCCTCCAGTTTTTCCCAGTGGGAAGTTGGGAC...GACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp TCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGGTCCCAACTTCCCACTaGGAAAAACTGGAGGGATCT +
Preference number: 4 (lower is better)
Translates to: SAGAPAPWWAMPGVTLTLVPTSH*EKLEGS
Trigger: AGATCCCTCCAGTTTTTCCCAGTGGGAAGTTGGGAC...CAGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GAGATGCCCACTCCCATAGGGTCCAAAGTGACAGGGAGGATGTCAAGCAGAGGAAGCCCAGTCTTCCCTTaGAGTCTGTACCCCACCAGA +
Preference number: 4 (lower is better)
Translates to: EMPTPIGSKVTGRMSSRGSPVFP*SLYPTR
Trigger: TCTGGTGGGGTACAGACTCCAAGGGAAGACTGGGCT...TCCTCTGCTTGACATCCTCCCTGTCACTTTGGACCCTATGGGAGTGGGCATCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CAGAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTAAGCCCAGTCTTCCCTTaGAGTCTGTACCCCACCAGA +
Preference number: 4 (lower is better)
Translates to: QREEEDWTCLGPCSRSLVSPVFP*SLYPTR
Trigger: TCTGGTGGGGTACAGACTCCAAGGGAAGACTGGGCT...TACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CCAGCCGGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCAGAAAGTGATGCACTGTaGCTCGCACCAAAGTTTGCT +
Preference number: 4 (lower is better)
Translates to: PAGDPTGHRATWQVTSQSESDAL*LAPKFA
Trigger: AGCAAACTTTGGTGCGAGCCACAGTGCATCACTTTC...TGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACCGGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCCTTGGGCAGCCCAATaGGTTATACCCAGGAAACCC +
Preference number: 4 (lower is better)
Translates to: DPTGHRATWQVTSQSFHPPWAAQ*VIPRKP
Trigger: GGGTTTCCTGGGTATAACCCATTGGGCTGCCCAAGG...AGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTTGGGCAGCCCAATaGGTTATACCCAGGAAACCC +
Preference number: 4 (lower is better)
Translates to: GDPTGHRATWQVTSQSFHPWAAQ*VIPRKP
Trigger: GGGTTTCCTGGGTATAACCCATTGGGCTGCCCAAGG...GTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp AGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTAAACCAGGCTGGCTGGCCTTaGGCAGCCCAATGGGTTATA +
Preference number: 4 (lower is better)
Translates to: REEEDWTCLGPCSRSLVNQAGWP*AAQWVI
Trigger: TATAACCCATTGGGCTGCCCAAGGCCAGCCAGCCTG...GTTTACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp AGGTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCTGCTGGCTTCTTTCCTaGCCATCAACTCCCCAAAGT +
Preference number: 4 (lower is better)
Translates to: RSAGAPAPWWAMPGVTLTCWLLS*PSTPQS
Trigger: ACTTTGGGGAGTTGATGGCCAGGAAAGAAGCCAGCA...GGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GTGACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCTGCGCACCAGCCCCCTGGTaGGCAATGCCAGGAGTTACT +
Preference number: 4 (lower is better)
Translates to: VTEGFSSVNFGGRQECSCAPAPW*AMPGVT
Trigger: AGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGC...GCAGGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTGGGCATCGGGCAACCTaGCAGGTCACAAGTCAATCA +
Preference number: 4 (lower is better)
Translates to: DPTGHRATWQVTSQSFHPGHRAT*QVTSQS
Trigger: TGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCC...AGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp GGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACAGCACTCAGTGATGCGTTTGCTCGGTaGCATGTGGGCAGGCTGACT +
Preference number: 4 (lower is better)
Translates to: GRSQVNHFTLTSSSTALSDAFAR*HVGRLT
Trigger: AGTCAGCCTGCCCACATGCCACCGAGCAAACGCATC...ACTGAGTGCTGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACAGCAGATGCGTTTGCTCGGTaGCATGTGGGCAGGCTGACT +
Preference number: 4 (lower is better)
Translates to: QPGRSQVNHFTLTSSSTADAFAR*HVGRLT
Trigger: AGTCAGCCTGCCCACATGCCACCGAGCAAACGCATC...TGCTGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp GGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGGGGGCATCTACTTGCTaGAAACATGTTGGGAGAGAG +
Preference number: 4 (lower is better)
Translates to: GSPMGYTQETPPARPEGSGASTC*KHVGRE
Trigger: CTCTCTCCCAACATGTTTCCAGCAAGTAGATGCCCC...CGACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GTGACAGGTGGTGACCCTGGAGCCAGATCTGGAAGGCCTTCCTGGGGGCTGCCCCTTAAGTTGACAACTTaGACTTGGCCAATACTGCAT +
Preference number: 4 (lower is better)
Translates to: VTGGDPGARSGRPSWGLPLKLTT*TWPILH
Trigger: ATGCAGTATTGGCCAAGTCCAAGTTGTCAACTTAAG...GGGCAGCCCCCAGGAAGGCCTTCCAGATCTGGCTCCAGGGTCACCACCTGTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp AAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGGTATTGCTGTGACAGGTAGGACTGGACATGTTTaGGCCCCTGTTCCCGGTCTT +
Preference number: 4 (lower is better)
Translates to: KGASQSQESMVPGIAVTGRTGHV*APVPGL
Trigger: AAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCT...ACCTGTCACAGCAATACCTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp GGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACAAGGACTGGACATGTTTaGGCCCCTGTTCCCGGTCTT +
Preference number: 4 (lower is better)
Translates to: GQPGRSQVNHFTLTSSSTRTGHV*APVPGL
Trigger: AAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCT...TGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp GGCTGCCCAGGGAACTCACCCATGAATCCAGAAGCACTTAACACTGGTGGTGGTAGGACTGGACATGTTTaGGCCCCTGTTCCCGGTCTT +
Preference number: 4 (lower is better)
Translates to: GCPGNSPMNPEALNTGGGRTGHV*APVPGL
Trigger: AAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCT...ACCACCACCAGTGTTAAGTGCTTCTGGATTCATGGGTGAGTTCCCTGGGCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp GCCTTGGGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAAGGGAAGAAGAGGACTaGACATGTTTGGGCCCCTGT +
Preference number: 4 (lower is better)
Translates to: ALGSPMGYTQETPPARPEREEED*TCLGPC
Trigger: ACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCT...TTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCCCAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCCAAAAGCAGTGCTTTCTCTaGGCAGCCTCATGGACCAGA +
Preference number: 4 (lower is better)
Translates to: AQWVIPRKPLQQDQKGRQKQCFL*AASWTR
Trigger: TCTGGTCCATGAGGCTGCCCAGAGAAAGCACTGCTT...TTGGCGACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp GGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGGTCCTTCTGCCTCTATaGCCTGCAGAATCTGTTTTG +
Preference number: 4 (lower is better)
Translates to: GSPMGYTQETPPARPEGSVLLPL*PAESVL
Trigger: CAAAACAGATTCTGCAGGTCATAGAGGCAGAAGGAC...CGACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp CCAGCAGAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTTTGTTTGTTCGCCTGTaGGGAAGCTCTGTAGCTGTC +
Preference number: 4 (lower is better)
Translates to: PAEGRRGLDMFGPLFPVFLFVRL*GSSVAV
Trigger: GACAGCTACAGAGCTTCCTCACAGGCGAACAAACAA...AAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTCTGCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR TCA 90 bp TGTAGGAGGAGAGATGTGAAAAGCAAGATGCGTTTGCTCGGTGGCATGTGGGCACTGTTGCGCTTCATTTaGCCTGTGGCTGGCTTCCGG +
Preference number: 4 (lower is better)
Translates to: CRRRDVKSKMRLLGGMWALLRFI*PVAGFR
Trigger: CCGGAAGCCAGCCACAGGTCAAATGAAGCGCAACAG...TGCCCACATGCCACCGAGCAAACGCATCTTGCTTTTCACATCTCTCCTCCTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000651418.1
CDS-3UTR TCA 90 bp TCAATCATTTCACCCTCACGTCGAGCAGCACAGCACTCAGTGGCTCTGACAACATTAGTGCACTGCTGCTaGGACGCAACAGGCCATCCG +
Preference number: 4 (lower is better)
Translates to: SIISPSRRAAQHSVALTTLVHCC*DATGHP
Trigger: CGGATGGCCTGTTGCGTCTCAGCAGCAGTGCACTAA...TGTTGTCAGAGCCACTGAGTGCTGTGCTGCTCGACGTGAGGGTGAAATGATTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp GTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTCACGTTCTGCTGCAATaGCTCTTCTTTGGTCAAACC +
Preference number: 4 (lower is better)
Translates to: VSRCTSPLVGNARSYFNPHVLLQ*LFFGQT
Trigger: GGTTTGACCAAAGAAGAGTCATTGCAGCAGAACGTG...AGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp AGGTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCACGTTCTGCTGCAATaGCTCTTCTTTGGTCAAACC +
Preference number: 4 (lower is better)
Translates to: RSAGAPAPWWAMPGVTLTHVLLQ*LFFGQT
Trigger: GGTTTGACCAAAGAAGAGTCATTGCAGCAGAACGTG...GGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp GGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACACACACAAGCCACTTTTaGTTTCAGCCTCCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: GQPGRSQVNHFTLTSSSTHTSHF*FQPPPG
Trigger: GCCAGGAGGAGGCTGAAATCAAAAGTGGCTTGTGTG...TGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR TCA 90 bp GCCGGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTACGCTGTATACGCACTaGTTCTCCTGGGACACACAA +
Preference number: 4 (lower is better)
Translates to: AGDPTGHRATWQVTSQSFTLYTH*FSWDTQ
Trigger: TTGTGTGTCCCAGGAGAATCAGTGCGTATACAGCGT...AAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACCGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR TCA 90 bp CAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACAGCAGTGTTACGAAAGGACTaGCGATCTTCAAGCCGGGGC +
Preference number: 4 (lower is better)
Translates to: QPGRSQVNHFTLTSSSTAVLRKD*RSSSRG
Trigger: GCCCCGGCTTGAAGATCGTCAGTCCTTTCGTAACAC...TGCTGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR TCA 90 bp AGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCCAAGTGACAGAGGGCTTTAGCCCACCCAGGGTGGTTTaGTACGTGAAAGTTGAATCC +
Preference number: 4 (lower is better)
Translates to: RKPLQQDQKGRQVTEGFSPPRVV*YVKVES
Trigger: GGATTCAACTTTCACGTATCAAACCACCCTGGGTGG...GCTAAAGCCCTCTGTCACTTGGCGACCCTTCTGGTCTTGCTGGAGGGGTTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp AGATCAGTGTCAAACTGTACCCTTGAGTGTCCCCAAAGGTTCCAGCAGAGGGAAACTCCGTGGTGGGGATaGTCCGGGGGCATATCTGGT +
Preference number: 4 (lower is better)
Translates to: RSVSNCTLECPQRFQQRETPWWG*SGGISG
Trigger: ACCAGATATGCCCCCGGATCATCCCCACCACGGAGT...TTCCCTCTGCTGGAACCTTTGGGGACACTCAAGGGTACAGTTTGACACTGATCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR TCA 90 bp CAAGGCAAGGGAAAACACACACAGGGGCATCTACTTGCTGGAAACATGTTGGGAACTCCGTGGTGGGGATaGTCCGGGGGCATATCTGGT +
Preference number: 4 (lower is better)
Translates to: QGKGKHTQGHLLAGNMLGTPWWG*SGGISG
Trigger: ACCAGATATGCCCCCGGATCATCCCCACCACGGAGT...TCCCAACATGTTTCCAGCAAGTAGATGCCCCTGTGTGTGTTTTCCCTTGCCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR TCA 90 bp GGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACACATCCGGATGCAACTaGGGCTGCTCCACTAATCTC +
Preference number: 4 (lower is better)
Translates to: GDPTGHRATWQVTSQSFHTSGCN*GCSTNL
Trigger: GAGATTAGTGGAGCAGCCTCAGTTGCATCCGGATGT...GTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp CAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACAGCACTGTCCTCCGTGAGGTaGCCTTCAAAGTCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: QPGRSQVNHFTLTSSSTALSSVR*PSKSEA
Trigger: AGCCTCTGACTTTGAAGGTCACCTCACGGAGGACAG...TGCTGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp AGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTAAACCTGTCCTCCGTGAGGTaGCCTTCAAAGTCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: REEEDWTCLGPCSRSLVNLSSVR*PSKSEA
Trigger: AGCCTCTGACTTTGAAGGTCACCTCACGGAGGACAG...GTTTACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp GAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTAAACACTGCTGTCCTCCGTaGGGTGACCTTCAAAGTCAG +
Preference number: 4 (lower is better)
Translates to: EGRRGLDMFGPLFPVFGKHCCPP*GDLQSQ
Trigger: CTGACTTTGAAGGTCACCTCACGGAGGACAGCAGTG...TTTACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp CAAGTGACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCGTTAGTGGCCTCCACTaGGGACCCAGGCATGGACAG +
Preference number: 4 (lower is better)
Translates to: QVTEGFSSVNFGGRQECSVSGLH*GPRHGQ
Trigger: CTGTCCATGCCTGGGTCCTCAGTGGAGGCCACTAAC...GGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGTCACTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp GCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGTGCGCACGGACTTCCTTCTaGTCTTCACAACTAAAGGAA +
Preference number: 4 (lower is better)
Translates to: AGAPAPWWAMPGVTLTLCARTSF*SSQLKE
Trigger: TTCCTTTAGTTGTGAAGATCAGAAGGAAGTCCGTGC...GCACAGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp CAAGTGACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCGGCATCCCTTCCAAGTaGCCCACCAGTTCCAGGGGA +
Preference number: 4 (lower is better)
Translates to: QVTEGFSSVNFGGRQECSGIPSK*PTSSRG
Trigger: TCCCCTGGAACTGGTGGGTCACTTGGAAGGGATGCC...GGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGTCACTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp CTTCCTGGGGGCTGCCCAGGGAACTCACCCATGAATCCAGAAGCACTTAACACTAGAAGGGCAAGTCCATaGCAAAGGGCATCCCTTCCA +
Preference number: 4 (lower is better)
Translates to: LPGGCPGNSPMNPEALNTRRASP*QRASLP
Trigger: TGGAAGGGATGCCCTTTGTCATGGACTTGCCCTTCT...AGTGTTAAGTGCTTCTGGATTCATGGGTGAGTTCCCTGGGCAGCCCCCAGGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp GAGATGCCCACTCCCATAGGGTCCAAAGTGACAGGGAGGATGTCAAGCAGAGGAAGAAGGGCAAGTCCATaGCAAAGGGCATCCCTTCCA +
Preference number: 4 (lower is better)
Translates to: EMPTPIGSKVTGRMSSRGRRASP*QRASLP
Trigger: TGGAAGGGATGCCCTTTGTCATGGACTTGCCCTTCT...TCCTCTGCTTGACATCCTCCCTGTCACTTTGGACCCTATGGGAGTGGGCATCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp GGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACAGAAGGGCAAGTCCATaGCAAAGGGCATCCCTTCCA +
Preference number: 4 (lower is better)
Translates to: GDPTGHRATWQVTSQSFHRRASP*QRASLP
Trigger: TGGAAGGGATGCCCTTTGTCATGGACTTGCCCTTCT...GTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp CTGGCATTTCTACTTAGTTCAGGTAGGTTAACTCCCTTGGTGGAGAATGCAACCGCTCCAGAGGCTCACTaGGCCCCTTCCCTGGCTCTC +
Preference number: 4 (lower is better)
Translates to: LAFLLSSGRLTPLVENATAPEAH*APSLAL
Trigger: GAGAGCCAGGGAAGGGGCTCAGTGAGCCTCTGGAGC...GGTTGCATTCTCCACCAAGGGAGTTAACCTACCTGAACTAAGTAGAAATGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp GGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACAGCACTCAGTCCAATACAGTCATCGTaGCAGAACGCACCGCAGCCT +
Preference number: 4 (lower is better)
Translates to: GRSQVNHFTLTSSSTALSPIQSS*QNAPQP
Trigger: AGGCTGCGGTGCGTTCTGTCACGATGACTGTATTGG...ACTGAGTGCTGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp GCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGTGCCAATACACAGAGCTTTaGGGGTCCAATACAGTCATC +
Preference number: 4 (lower is better)
Translates to: AGAPAPWWAMPGVTLTLCQYTEL*GSNTVI
Trigger: GATGACTGTATTGGACCCTCAAAGCTCTGTGTATTG...GCACAGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp GGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCGTCAACTGGCAAATaGCTCAACTGTGACCCTGAG +
Preference number: 4 (lower is better)
Translates to: GDPTGHRATWQVTSQSFHPSTGK*LNCDPE
Trigger: CTCAGGGTCACAGTTGAGTCATTTGCCAGTTGACGG...GTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp AAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGGTATTGCTGTGACAGGTCCGTCAACTGGCAAATaGCTCAACTGTGACCCTGAG +
Preference number: 4 (lower is better)
Translates to: KGASQSQESMVPGIAVTGPSTGK*LNCDPE
Trigger: CTCAGGGTCACAGTTGAGTCATTTGCCAGTTGACGG...ACCTGTCACAGCAATACCTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp GGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCAGGGAACTCACCCATaGATCCAGAAGCACTTAACA +
Preference number: 4 (lower is better)
Translates to: GSPMGYTQETPPARPEGSQGTHP*IQKHLT
Trigger: TGTTAAGTGCTTCTGGATTCATGGGTGAGTTCCCTG...CGACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp ATCAAGAGATACATCGTTTTCACCACTCACAGTGCTGGCTTCATTAGACCCACAGCTCTGCTGAGGGACTaGGACAGGACCGACGGCGGG +
Preference number: 4 (lower is better)
Translates to: IKRYIVFTTHSAGFIRPTALLRD*DRTDGG
Trigger: CCCGCCGTCGGTCCTGTCTCAGTCCCTCAGCAGAGC...TGTGGGTCTAATGAAGCCAGCACTGTGAGTGGTGAAAACGATGTATCTCTTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644587.1
CDS-3UTR TCA 90 bp CATGGCTTTGTTTCTTCCCAAACCTGCCTGATGTCAAAAGTACGTCAAAAGGAGGCTCTGCTGAGGGACTaGGACAGGACCGACGGCGGG +
Preference number: 4 (lower is better)
Translates to: HGFVSSQTCLMSKVRQKEALLRD*DRTDGG
Trigger: CCCGCCGTCGGTCCTGTCTCAGTCCCTCAGCAGAGC...CTCCTTTTGACGTACTTTTGACATCAGGCAGGTTTGGGAAGAAACAAAGCCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375687.10
ENST00000613218.4
ENST00000651418.1
CDS-3UTR TCA 90 bp AGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTAAACTGCCATTGGCGTCCTTaGATGTGGGGTCGCTTTTCC +
Preference number: 4 (lower is better)
Translates to: REEEDWTCLGPCSRSLVNCHWRP*MWGRFS
Trigger: GGAAAAGCGACCCCACATTCAAGGACGCCAATGGCA...GTTTACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000646985.1
CDS-3UTR GCA 90 bp TCAATCATTTCACCCTCACGTCGAGCAGCACAGCACTCAGTGGCTCTGACAACAGGATGGCGAGACCACTaGAGGGCATCCTTCTTGAGC +
Preference number: 4 (lower is better)
Translates to: SIISPSRRAAQHSVALTTGWRDH*RASFLS
Trigger: GCTCAAGAAGGATGCCCTGCAGTGGTCTCGCCATCC...TGTTGTCAGAGCCACTGAGTGCTGTGCTGCTCGACGTGAGGGTGAAATGATTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp CAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGGAAGAGGAGCTGCTaGTGGAAGTGTGATGGTAAG +
Preference number: 4 (lower is better)
Translates to: QGIGQPGRSQVNHFTLTSRKRSC*WKCDGK
Trigger: CTTACCATCACACTTCCAGCAGCAGCTCCTCTTCCT...CGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR GCA 90 bp GCCGGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTTGGCCCACGTTCTGCTaGAATGACTCTTCTTTGGTC +
Preference number: 4 (lower is better)
Translates to: AGDPTGHRATWQVTSQSFWPTFC*NDSSLV
Trigger: GACCAAAGAAGAGTCATTGCAGCAGAACGTGGGCCA...AAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR GCA 90 bp GCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCCAATGGCCCACGTTCTGCTaGAATGACTCTTCTTTGGTC +
Preference number: 4 (lower is better)
Translates to: AQWVIPRKPLQQDQKGRQWPTFC*NDSSLV
Trigger: GACCAAAGAAGAGTCATTGCAGCAGAACGTGGGCCA...TTGGCGACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCCAATCCTGGCCCACGTTCTaGTGCAATGACTCTTCTTTG +
Preference number: 4 (lower is better)
Translates to: AQWVIPRKPLQQDQKGRQSWPTF*CNDSSL
Trigger: CAAAGAAGAGTCATTGCAGCAGAACGTGGGCCAGGA...TTGGCGACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACAGCACTCAGTAGATGCAGAGGCACGTaGCAAGTTGTCTGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: GRSQVNHFTLTSSSTALSRCRGT*QVVWLS
Trigger: GCTGAGCCAGACAACTTGGCACGTGCCTCTGCATCT...ACTGAGTGCTGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp AGGTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCAATTCTGTCTGGAGATaGAGAGGCACGTGCCAAGTT +
Preference number: 4 (lower is better)
Translates to: RSAGAPAPWWAMPGVTLTNSVWR*RGTCQV
Trigger: AACTTGGCACGTGCCTCTGCATCTCCAGACAGAATT...GGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp CAGAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTACTTTTCGGGAAAGGATaGAGAGGCCGCCTGCTCAAA +
Preference number: 4 (lower is better)
Translates to: QREEEDWTCLGPCSRSLVLFGKG*RGRLLK
Trigger: TTTGAGCAGGCGGCCTCTGCATCCTTTCCCGAAAAG...TACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR GCA 90 bp CTTGGTGGAGAATGCAACCTTCTTGCTTCAGTTTCAAGTCCCTCTGGGAGTCAGCTCGCCCCTCGGACCTaGAGAGCACGGGCTTTAATG +
Preference number: 4 (lower is better)
Translates to: LGGECNLLASVSSPSGSQLAPRT*RARALM
Trigger: CATTAAAGCCCGTGCTCTGCAGGTCCGAGGGGCGAG...CTGACTCCCAGAGGGACTTGAAACTGAAGCAAGAAGGTTGCATTCTCCACCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp AGGTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCTCAAATGCTCTGTTCTaGAGGCAATCAGTCGGTGAG +
Preference number: 4 (lower is better)
Translates to: RSAGAPAPWWAMPGVTLTSNALF*RQSVGE
Trigger: CTCACCGACTGATTGCCTGCAGAACAGAGCATTTGA...GGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp AAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGGTATTGCTGTGACAGGTGACAGTAACTGCCATTaGTGTCACTGCCTCCTCGAG +
Preference number: 4 (lower is better)
Translates to: KGASQSQESMVPGIAVTGDSNCH*CHCLLE
Trigger: CTCGAGGAGGCAGTGACAGCAATGGCAGTTACTGTC...ACCTGTCACAGCAATACCTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACAGACAGTAACTGCCATTaGTGTCACTGCCTCCTCGAG +
Preference number: 4 (lower is better)
Translates to: GQPGRSQVNHFTLTSSSTDSNCH*CHCLLE
Trigger: CTCGAGGAGGCAGTGACAGCAATGGCAGTTACTGTC...TGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp CCAGCAGAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTACCGTGAGGACTCAGTaGTTCAGAGTCTCCGTTGAT +
Preference number: 4 (lower is better)
Translates to: PAEGRRGLDMFGPLFPVFTVRTQ*FRVSVD
Trigger: ATCAACGGAGACTCTGAAGCACTGAGTCCTCACGGT...AAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTCTGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp AGGTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCAGATCCCTTTGTCACTaGAGCTTCTCTAGTGTCAGC +
Preference number: 4 (lower is better)
Translates to: RSAGAPAPWWAMPGVTLTRSLCH*SFSSVS
Trigger: GCTGACACTAGAGAAGCTGCAGTGACAAAGGGATCT...GGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GCCTTGGGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAACTACCCTGCAGCAACTaGATCACAAGTGGGTTAGTG +
Preference number: 4 (lower is better)
Translates to: ALGSPMGYTQETPPARPELPCSN*ITSGLV
Trigger: CACTAACCCACTTGTGATGCAGTTGCTGCAGGGTAG...TTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCCCAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACAGGGGCAAGCTACCCTaGAGCAACTGCATCACAAGT +
Preference number: 4 (lower is better)
Translates to: GDPTGHRATWQVTSQSFHRGKLP*SNCITS
Trigger: ACTTGTGATGCAGTTGCTGCAGGGTAGCTTGCCCCT...GTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GCCTTGGGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAACATGTAAAGATCCCATaGGTAGCGAGCCATGGCTCT +
Preference number: 4 (lower is better)
Translates to: ALGSPMGYTQETPPARPEHVKIP*VASHGS
Trigger: AGAGCCATGGCTCGCTACGCATGGGATCTTTACATG...TTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCCCAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp CAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGTCCTGGCAAGACCAGTaGCTGTTTCACAGCTATCTG +
Preference number: 4 (lower is better)
Translates to: QGIGQPGRSQVNHFTLTSSWQDQ*LFHSYL
Trigger: CAGATAGCTGTGAAACAGGCACTGGTCTTGCCAGGA...CGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp AGGTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCAACTTGGGACTGCCTTaGAATTCTTTTGGGGTGCTC +
Preference number: 4 (lower is better)
Translates to: RSAGAPAPWWAMPGVTLTNLGLP*NSFGVL
Trigger: GAGCACCCCAAAAGAATTGCAAGGCAGTCCCAAGTT...GGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GTGACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCTGCAGGGCCCGACCTGTCTaGTCTGGACCAAAGGAGATC +
Preference number: 4 (lower is better)
Translates to: VTEGFSSVNFGGRQECSCRARPV*SGPKEI
Trigger: GATCTCCTTTGGTCCAGAGCAGACAGGTCGGGCCCT...GCAGGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp ATGTCAAAAGTACGTCAAAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGAGGGCCCGACCTGTCTaGTCTGGACCAAAGGAGATC +
Preference number: 4 (lower is better)
Translates to: MSKVRQKEPHSPRRAWSQRARPV*SGPKEI
Trigger: GATCTCCTTTGGTCCAGAGCAGACAGGTCGGGCCCT...CTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTTTGACGTACTTTTGACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp AGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCCAAGTGACAGAGGGCTTTAGCCAGACATGGAGTTTGTaGTTGGTCCCAACTTCCCAC +
Preference number: 4 (lower is better)
Translates to: RKPLQQDQKGRQVTEGFSQTWSL*LVPTSH
Trigger: GTGGGAAGTTGGGACCAAGCACAAACTCCATGTCTG...GCTAAAGCCCTCTGTCACTTGGCGACCCTTCTGGTCTTGCTGGAGGGGTTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTAAATCATGGCTTTCAGGCTaGACGCACACTGGAGCGAGA +
Preference number: 4 (lower is better)
Translates to: EGRRGLDMFGPLFPVFGKSWLSG*THTGAR
Trigger: TCTCGCTCCAGTGTGCGTGCAGCCTGAAAGCCATGA...TTTACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGTGCAACCAAGGTCAAACTTaGTCCGTCAACTGGCAAATG +
Preference number: 4 (lower is better)
Translates to: AGAPAPWWAMPGVTLTLCNQGQT*SVNWQM
Trigger: CATTTGCCAGTTGACGGAGCAAGTTTGACCTTGGTT...GCACAGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp AAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGGTATTGCTGTGACAGGTAAAGCAAGATGCGTTTaGTCGGTGGCATGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: KGASQSQESMVPGIAVTGKARCV*SVACGQ
Trigger: CTGCCCACATGCCACCGAGCAAACGCATCTTGCTTT...ACCTGTCACAGCAATACCTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp GAGAGGCAGGAGCAGGCATGGCTTTGTTTCTTCCCAAACCTGCCTGATGTCAAATCCCTCCACTGTAGCTaGATGGCGAGACCACTGCAG +
Preference number: 4 (lower is better)
Translates to: ERQEQAWLCFFPNLPDVKSLHCS*MARPLQ
Trigger: CTGCAGTGGTCTCGCCATCCAGCTACAGTGGAGGGA...TTTGACATCAGGCAGGTTTGGGAAGAAACAAAGCCATGCCTGCTCCTGCCTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp GGCTGCCCAGGGAACTCACCCATGAATCCAGAAGCACTTAACACTGGTGGTGGTAGCTGTCCCTGGGATTaGAAAGAGGTCGACTCTGAG +
Preference number: 4 (lower is better)
Translates to: GCPGNSPMNPEALNTGGGSCPWD*KEVDSE
Trigger: CTCAGAGTCGACCTCTTTCCAATCCCAGGGACAGCT...ACCACCACCAGTGTTAAGTGCTTCTGGATTCATGGGTGAGTTCCCTGGGCAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp GACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTAGCTGTCCCTGGGATTaGAAAGAGGTCGACTCTGAG +
Preference number: 4 (lower is better)
Translates to: DPTGHRATWQVTSQSFHPSCPWD*KEVDSE
Trigger: CTCAGAGTCGACCTCTTTCCAATCCCAGGGACAGCT...AGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp GGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACAAGCTGTCCCTGGGATTaGAAAGAGGTCGACTCTGAG +
Preference number: 4 (lower is better)
Translates to: GQPGRSQVNHFTLTSSSTSCPWD*KEVDSE
Trigger: CTCAGAGTCGACCTCTTTCCAATCCCAGGGACAGCT...TGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp GAGATGCCCACTCCCATAGGGTCCAAAGTGACAGGGAGGATGTCAAGCAGAGGACTCTGTAGCTGTCCCTaGGATTGGAAAGAGGTCGAC +
Preference number: 4 (lower is better)
Translates to: EMPTPIGSKVTGRMSSRGLCSCP*DWKEVD
Trigger: GTCGACCTCTTTCCAATCCCAGGGACAGCTACAGAG...TCCTCTGCTTGACATCCTCCCTGTCACTTTGGACCCTATGGGAGTGGGCATCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACGATGCAGATTCCACGTaGGCCCCGTTTACCTTCAGA +
Preference number: 4 (lower is better)
Translates to: GDPTGHRATWQVTSQSFHDADST*APFTFR
Trigger: TCTGAAGGTAAACGGGGCCCACGTGGAATCTGCATC...GTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp AGGTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCTGTGATGGTAAGGCATaGAAGGTCCGAGAGTTGATC +
Preference number: 4 (lower is better)
Translates to: RSAGAPAPWWAMPGVTLTCDGKA*KVRELI
Trigger: GATCAACTCTCGGACCTTCCATGCCTTACCATCACA...GGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GCCGGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTAAGAGGAGCTGCTGCTaGAAGTGTGATGGTAAGGCA +
Preference number: 4 (lower is better)
Translates to: AGDPTGHRATWQVTSQSFKRSCC*KCDGKA
Trigger: TGCCTTACCATCACACTTCCAGCAGCAGCTCCTCTT...AAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACCGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp ACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCTGCCTATCGCTGTCGGGTGGCTaGACCACGCTGTATACGCAC +
Preference number: 4 (lower is better)
Translates to: TEGFSSVNFGGRQECSCLSLSGG*TTLYTH
Trigger: GTGCGTATACAGCGTGGTCCAGCCACCCGACAGCGA...TAGGCAGGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CAAGGCAAGGGAAAACACACACAGGGGCATCTACTTGCTGGAAACATGTTGGGATCGCTGTCGGGTGGCTaGACCACGCTGTATACGCAC +
Preference number: 4 (lower is better)
Translates to: QGKGKHTQGHLLAGNMLGSLSGG*TTLYTH
Trigger: GTGCGTATACAGCGTGGTCCAGCCACCCGACAGCGA...TCCCAACATGTTTCCAGCAAGTAGATGCCCCTGTGTGTGTTTTCCCTTGCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp TGTAGGAGGAGAGATGTGAAAAGCAAGATGCGTTTGCTCGGTGGCATGTGGGCACATCTCGCTGTCGGGTaGCTGGACCACGCTGTATAC +
Preference number: 4 (lower is better)
Translates to: CRRRDVKSKMRLLGGMWAHLAVG*LDHAVY
Trigger: GTATACAGCGTGGTCCAGCCACCCGACAGCGAGATG...TGCCCACATGCCACCGAGCAAACGCATCTTGCTTTTCACATCTCTCCTCCTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp ATGTCAAAAGTACGTCAAAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGCATCTCGCTGTCGGGTaGCTGGACCACGCTGTATAC +
Preference number: 4 (lower is better)
Translates to: MSKVRQKEPHSPRRAWSQHLAVG*LDHAVY
Trigger: GTATACAGCGTGGTCCAGCCACCCGACAGCGAGATG...CTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTTTGACGTACTTTTGACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp GAGAATGCAACCTTCTTGCTTCAGTTTCAAGTCCCTCTGGGAGTCAGGCAGTCCCATCTCGCTGTCGGGTaGCTGGACCACGCTGTATAC +
Preference number: 4 (lower is better)
Translates to: ENATFLLQFQVPLGVRQSHLAVG*LDHAVY
Trigger: GTATACAGCGTGGTCCAGCCACCCGACAGCGAGATG...GGACTGCCTGACTCCCAGAGGGACTTGAAACTGAAGCAAGAAGGTTGCATTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp AGGTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCTCTGGTTCGGAGATCTaGCCGAGAGCGTTTCTTAAA +
Preference number: 4 (lower is better)
Translates to: RSAGAPAPWWAMPGVTLTSGSEI*PRAFLK
Trigger: TTTAAGAAACGCTCTCGGCCAGATCTCCGAACCAGA...GGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CTTTCACATACACAGGTGCGTGGAGATGCCCACTCCCATAGGGTCCAAAGTGACGATTCCTTCTGGCTCTaGTTCGGAGATCTGGCCGAG +
Preference number: 4 (lower is better)
Translates to: LSHTQVRGDAHSHRVQSDDSFWL*FGDLAE
Trigger: CTCGGCCAGATCTCCGAACCAGAGCCAGAAGGAATC...GTCACTTTGGACCCTATGGGAGTGGGCATCTCCACGCACCTGTGTATGTGAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CTTGGTGGAGAATGCAACCTTCTTGCTTCAGTTTCAAGTCCCTCTGGGAGTCAGACTGCTCAGCCCTGCTaGGTCAGTCTTAGCCTCCCC +
Preference number: 4 (lower is better)
Translates to: LGGECNLLASVSSPSGSQTAQPC*VSLSLP
Trigger: GGGGAGGCTAAGACTGACCCAGCAGGGCTGAGCAGT...CTGACTCCCAGAGGGACTTGAAACTGAAGCAAGAAGGTTGCATTCTCCACCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CAAGTGACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCGATGTGCCTGGCAGATaGGGACTGCTCAGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: QVTEGFSSVNFGGRQECSDVPGR*GLLSPA
Trigger: AGCAGGGCTGAGCAGTCCCCATCTGCCAGGCACATC...GGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGTCACTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp AGATCAGTGTCAAACTGTACCCTTGAGTGTCCCCAAAGGTTCCAGCAGAGGGAAGATGTGCCTGGCAGATaGGGACTGCTCAGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: RSVSNCTLECPQRFQQREDVPGR*GLLSPA
Trigger: AGCAGGGCTGAGCAGTCCCCATCTGCCAGGCACATC...TTCCCTCTGCTGGAACCTTTGGGGACACTCAAGGGTACAGTTTGACACTGATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp GTCAAAAGTACGTCAAAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGGTTTGTCTGGCTCAGCCTaGATCCGAGAAGCCACAGAC +
Preference number: 4 (lower is better)
Translates to: VKSTSKGASQSQESMVPGLSGSA*IREATD
Trigger: GTCTGTGGCTTCTCGGATCCAGGCTGAGCCAGACAA...ACCTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTTTGACGTACTTTTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp TTTGTTTCTTCCCAAACCTGCCTGATGTCAAAAGTACGTCAAAAGGAGCCTCACTGTCTGCGAGGGTCCTaGCGCCAGTCCAACCCCGGC +
Preference number: 4 (lower is better)
Translates to: FVSSQTCLMSKVRQKEPHCLRGS*RQSNPG
Trigger: GCCGGGGTTGGACTGGCGCCAGGACCCTCGCAGACA...GTGAGGCTCCTTTTGACGTACTTTTGACATCAGGCAGGTTTGGGAAGAAACAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp CAGACGCTTAAGTTGACAACTTGGACTTGGCCAATACTGCATTCTAAATCACCATGCTCGGGCCTCCCCTaGGCTCAGGGTGGCCACAGG +
Preference number: 4 (lower is better)
Translates to: QTLKLTTWTWPILHSKSPCSGLP*AQGGHR
Trigger: CCTGTGGCCACCCTGAGCCCAGGGGAGGCCCGAGCA...TGGTGATTTAGAATGCAGTATTGGCCAAGTCCAAGTTGTCAACTTAAGCGTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp ACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCTGCCTAGGAGCAACGGGGAGTTaGGAGGCATCTCCTAGCCCA +
Preference number: 4 (lower is better)
Translates to: TEGFSSVNFGGRQECSCLGATGS*EASPSP
Trigger: TGGGCTAGGAGATGCCTCCCAACTCCCCGTTGCTCC...TAGGCAGGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp AACAAGGCAAGGGAAAACACACACAGGGGCATCTACTTGCTGGAAACATGTTGGAGTAGGGGCAAGGCCTaGCATGGCTGGTCCCCAGTG +
Preference number: 4 (lower is better)
Translates to: NKARENTHRGIYLLETCWSRGKA*HGWSPV
Trigger: CACTGGGGACCAGCCATGCCAGGCCTTGCCCCTACT...CCAACATGTTTCCAGCAAGTAGATGCCCCTGTGTGTGTTTTCCCTTGCCTTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CAGAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTATGTCTGCAGGAACGGTaGGTCCTTGCTCCTCATCAT +
Preference number: 4 (lower is better)
Translates to: QREEEDWTCLGPCSRSLVCLQER*VLAPHH
Trigger: ATGATGAGGAGCAAGGACCCACCGTTCCTGCAGACA...TACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCCAACCACTAGAGACGGAATaGGACCATTGTCTGCAGGAA +
Preference number: 4 (lower is better)
Translates to: AQWVIPRKPLQQDQKGRQPLETE*DHCLQE
Trigger: TTCCTGCAGACAATGGTCCCATTCCGTCTCTAGTGG...TTGGCGACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACTCCTCTCCAACCTaGGGCTCAACAGATGGTATG +
Preference number: 4 (lower is better)
Translates to: DPTGHRATWQVTSQSFHPHSSPT*GSTDGM
Trigger: CATACCATCTGTTGAGCCCCAGGTTGGAGAGGAGTG...AGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CTTTCACATACACAGGTGCGTGGAGATGCCCACTCCCATAGGGTCCAAAGTGACCAGAGGCTGTATCCGTaGACTCACCGTGAGGACTCA +
Preference number: 4 (lower is better)
Translates to: LSHTQVRGDAHSHRVQSDQRLYP*THREDS
Trigger: TGAGTCCTCACGGTGAGTCCACGGATACAGCCTCTG...GTCACTTTGGACCCTATGGGAGTGGGCATCTCCACGCACCTGTGTATGTGAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CCAGCCGGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCAATTCACCTTGGACAGTaGGGCAGATTGGTTCCAATT +
Preference number: 4 (lower is better)
Translates to: PAGDPTGHRATWQVTSQSIHLGQ*GRLVPI
Trigger: AATTGGAACCAATCTGCCCCACTGTCCAAGGTGAAT...TGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACCGGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp AGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCCAAGTGACAGAGGGCTTTAGCGAATCTGGGATCTTTTaGCGGACCGCACATACTCGA +
Preference number: 4 (lower is better)
Translates to: RKPLQQDQKGRQVTEGFSESGIF*RTAHTR
Trigger: TCGAGTATGTGCGGTCCGCCAAAAGATCCCAGATTC...GCTAAAGCCCTCTGTCACTTGGCGACCCTTCTGGTCTTGCTGGAGGGGTTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CAGAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTAGACATGCTGTCATCGTaGGCTGGTGGAAGAACCTTC +
Preference number: 4 (lower is better)
Translates to: QREEEDWTCLGPCSRSLVDMLSS*AGGRTF
Trigger: GAAGGTTCTTCCACCAGCCCACGATGACAGCATGTC...TACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GTCAAAAGTACGTCAAAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGGTGCCTTGCAATTCTTTTaGGGTGCTCCAGGAGCCTGG +
Preference number: 4 (lower is better)
Translates to: VKSTSKGASQSQESMVPGALQFF*GAPGAW
Trigger: CCAGGCTCCTGGAGCACCCCAAAAGAATTGCAAGGC...ACCTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTTTGACGTACTTTTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp AGGTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCGGATTTGTCACTGGATaGAGGGAGTCAAAACTTGGG +
Preference number: 4 (lower is better)
Translates to: RSAGAPAPWWAMPGVTLTGFVTG*RESKLG
Trigger: CCCAAGTTTTGACTCCCTCCATCCAGTGACAAATCC...GGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGGGATTTGTCACTGGATaGAGGGAGTCAAAACTTGGG +
Preference number: 4 (lower is better)
Translates to: GSPMGYTQETPPARPEGSGFVTG*RESKLG
Trigger: CCCAAGTTTTGACTCCCTCCATCCAGTGACAAATCC...CGACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACACCCACTGGGAAAAACTaGAGGGATCTCAGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: GQPGRSQVNHFTLTSSSTPTGKN*RDLSRK
Trigger: CTTCCTGCTGAGATCCCTCCAGTTTTTCCCAGTGGG...TGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACAGTACCCCACCAGACATaGAGTTTGTGCTTGGTCCCA +
Preference number: 4 (lower is better)
Translates to: GQPGRSQVNHFTLTSSSTVPHQT*SLCLVP
Trigger: TGGGACCAAGCACAAACTCCATGTCTGGTGGGGTAC...TGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGTGCCTGGTGGAACTCAGTTaGAGTTTAGAAAGCTTCCCA +
Preference number: 4 (lower is better)
Translates to: AGAPAPWWAMPGVTLTLCLVELS*SLESFP
Trigger: TGGGAAGCTTTCTAAACTCCAACTGAGTTCCACCAG...GCACAGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GGGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGAAAGTGATGCACTGTaGCTCGCACCAAAGTTTGCT +
Preference number: 4 (lower is better)
Translates to: GQPNGLYPGNPSSKTRRVESDAL*LAPKFA
Trigger: AGCAAACTTTGGTGCGAGCCACAGTGCATCACTTTC...GACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GAGAATGCAACCTTCTTGCTTCAGTTTCAAGTCCCTCTGGGAGTCAGGCAGTCCAGGCTGCACGCACACTaGAGCGAGATGCTTTCCACC +
Preference number: 4 (lower is better)
Translates to: ENATFLLQFQVPLGVRQSRLHAH*SEMLST
Trigger: GGTGGAAAGCATCTCGCTCCAGTGTGCGTGCAGCCT...GGACTGCCTGACTCCCAGAGGGACTTGAAACTGAAGCAAGAAGGTTGCATTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GAGAGGCAGGAGCAGGCATGGCTTTGTTTCTTCCCAAACCTGCCTGATGTCAAAAGGCTGCACGCACACTaGAGCGAGATGCTTTCCACC +
Preference number: 4 (lower is better)
Translates to: ERQEQAWLCFFPNLPDVKRLHAH*SEMLST
Trigger: GGTGGAAAGCATCTCGCTCCAGTGTGCGTGCAGCCT...TTTGACATCAGGCAGGTTTGGGAAGAAACAAAGCCATGCCTGCTCCTGCCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACAGCACTCAGTCCTTGGGCAGCCCAATaGGTTATACCCAGGAAACCC +
Preference number: 4 (lower is better)
Translates to: GRSQVNHFTLTSSSTALSPWAAQ*VIPRKP
Trigger: GGGTTTCCTGGGTATAACCCATTGGGCTGCCCAAGG...ACTGAGTGCTGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GAGAGGCAGGAGCAGGCATGGCTTTGTTTCTTCCCAAACCTGCCTGATGTCAAACAGGCTGGCTGGCCTTaGGCAGCCCAATGGGTTATA +
Preference number: 4 (lower is better)
Translates to: ERQEQAWLCFFPNLPDVKQAGWP*AAQWVI
Trigger: TATAACCCATTGGGCTGCCCAAGGCCAGCCAGCCTG...TTTGACATCAGGCAGGTTTGGGAAGAAACAAAGCCATGCCTGCTCCTGCCTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GAGAATGCAACCTTCTTGCTTCAGTTTCAAGTCCCTCTGGGAGTCAGGCAGTCCCAGGCTGGCTGGCCTTaGGCAGCCCAATGGGTTATA +
Preference number: 4 (lower is better)
Translates to: ENATFLLQFQVPLGVRQSQAGWP*AAQWVI
Trigger: TATAACCCATTGGGCTGCCCAAGGCCAGCCAGCCTG...GGACTGCCTGACTCCCAGAGGGACTTGAAACTGAAGCAAGAAGGTTGCATTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTAGGGAAGAAGAGGACTaGACATGTTTGGGCCCCTGT +
Preference number: 4 (lower is better)
Translates to: DPTGHRATWQVTSQSFHPREEED*TCLGPC
Trigger: ACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCT...AGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp GGCTGCCCAGGGAACTCACCCATGAATCCAGAAGCACTTAACACTGGTGGTGGTAGGGAAGAAGAGGACTaGACATGTTTGGGCCCCTGT +
Preference number: 4 (lower is better)
Translates to: GCPGNSPMNPEALNTGGGREEED*TCLGPC
Trigger: ACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCT...ACCACCACCAGTGTTAAGTGCTTCTGGATTCATGGGTGAGTTCCCTGGGCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp TCCACGTGGGCCCCGTTTACCTTCAGAGGAGTCAGGACAACTCGAGGCAGCATCTTTGTGAAGCTGTGGTaGGAAGATCACTTGAGGCCA +
Preference number: 4 (lower is better)
Translates to: STWAPFTFRGVRTTRGSIFVKLW*EDHLRP
Trigger: TGGCCTCAAGTGATCTTCCCACCACAGCTTCACAAA...GATGCTGCCTCGAGTTGTCCTGACTCCTCTGAAGGTAAACGGGGCCCACGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644587.1
CDS-3UTR TCA 90 bp CAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGGTCCTTCTGCCTCTATaGCCTGCAGAATCTGTTTTG +
Preference number: 4 (lower is better)
Translates to: QGIGQPGRSQVNHFTLTSVLLPL*PAESVL
Trigger: CAAAACAGATTCTGCAGGTCATAGAGGCAGAAGGAC...CGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR TCA 90 bp GTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGAAAGAGGTCGACTCTaGGATTCTGTAGAACAGGAT +
Preference number: 4 (lower is better)
Translates to: VSRCTSPLVGNARSYFNPERGRL*DSVEQD
Trigger: ATCCTGTTCTACAGAATCTCAGAGTCGACCTCTTTC...AGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp CTTCCTGGGGGCTGCCCAGGGAACTCACCCATGAATCCAGAAGCACTTAACACTTTGTTTGTTCGCCTGTaGGGAAGCTCTGTAGCTGTC +
Preference number: 4 (lower is better)
Translates to: LPGGCPGNSPMNPEALNTLFVRL*GSSVAV
Trigger: GACAGCTACAGAGCTTCCTCACAGGCGAACAAACAA...AGTGTTAAGTGCTTCTGGATTCATGGGTGAGTTCCCTGGGCAGCCCCCAGGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR TCA 90 bp CCGGTCTTTGGTAAACAGACGCTTAAGTTGACAACTTGGACTTGGCCAATACTGGCAGCCCGAGAACCCTaGTGCAGATTCCACGTGGGC +
Preference number: 4 (lower is better)
Translates to: PVFGKQTLKLTTWTWPILAAREP*CRFHVG
Trigger: GCCCACGTGGAATCTGCATCAGGGTTCTCGGGCTGC...CAGTATTGGCCAAGTCCAAGTTGTCAACTTAAGCGTCTGTTTACCAAAGACCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000651418.1
CDS-3UTR TCA 90 bp AGATCAGTGTCAAACTGTACCCTTGAGTGTCCCCAAAGGTTCCAGCAGAGGGAATTAGTGCACTGCTGCTaGGACGCAACAGGCCATCCG +
Preference number: 4 (lower is better)
Translates to: RSVSNCTLECPQRFQQRELVHCC*DATGHP
Trigger: CGGATGGCCTGTTGCGTCTCAGCAGCAGTGCACTAA...TTCCCTCTGCTGGAACCTTTGGGGACACTCAAGGGTACAGTTTGACACTGATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR TCA 90 bp CAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGCACGTTCTGCTGCAATaGCTCTTCTTTGGTCAAACC +
Preference number: 4 (lower is better)
Translates to: QGIGQPGRSQVNHFTLTSHVLLQ*LFFGQT
Trigger: GGTTTGACCAAAGAAGAGTCATTGCAGCAGAACGTG...CGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR TCA 90 bp GCCGGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACGTTCTGCTGCAATaGCTCTTCTTTGGTCAAACC +
Preference number: 4 (lower is better)
Translates to: AGDPTGHRATWQVTSQSFHVLLQ*LFFGQT
Trigger: GGTTTGACCAAAGAAGAGTCATTGCAGCAGAACGTG...AAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACCGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR TCA 90 bp GGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACGTAGAGGGGAACATCTaGGGCCACAGATTTTGCATC +
Preference number: 4 (lower is better)
Translates to: GDPTGHRATWQVTSQSFHVEGNI*GHRFCI
Trigger: GATGCAAAATCTGTGGCCTCAGATGTTCCCCTCTAC...GTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR TCA 90 bp GAGATGCCCACTCCCATAGGGTCCAAAGTGACAGGGAGGATGTCAAGCAGAGGAGGGTGGTTTGATACGTaGAAGTTGAATCCGGATGGG +
Preference number: 4 (lower is better)
Translates to: EMPTPIGSKVTGRMSSRGGWFDT*KLNPDG
Trigger: CCCATCCGGATTCAACTTTCACGTATCAAACCACCC...TCCTCTGCTTGACATCCTCCCTGTCACTTTGGACCCTATGGGAGTGGGCATCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp GGGGGTAGTGGAAGACTGGCATTTCTACTTAGTTCAGGTAGGTTAACTCCCTTGACTCCGTGGTGGGGATaGTCCGGGGGCATATCTGGT +
Preference number: 4 (lower is better)
Translates to: GGSGRLAFLLSSGRLTPLTPWWG*SGGISG
Trigger: ACCAGATATGCCCCCGGATCATCCCCACCACGGAGT...CAAGGGAGTTAACCTACCTGAACTAAGTAGAAATGCCAGTCTTCCACTACCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp AGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTAAACACATCCGGATGCAACTaGGGCTGCTCCACTAATCTC +
Preference number: 4 (lower is better)
Translates to: REEEDWTCLGPCSRSLVNTSGCN*GCSTNL
Trigger: GAGATTAGTGGAGCAGCCTCAGTTGCATCCGGATGT...GTTTACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp GAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTAAAACATCCGGATGCAACTaGGGCTGCTCCACTAATCTC +
Preference number: 4 (lower is better)
Translates to: EGRRGLDMFGPLFPVFGKTSGCN*GCSTNL
Trigger: GAGATTAGTGGAGCAGCCTCAGTTGCATCCGGATGT...TTTACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp CTTCCTGGGGGCTGCCCAGGGAACTCACCCATGAATCCAGAAGCACTTAACACTTCCTTCATAGTGGGATaGCTGTCAAGAGCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: LPGGCPGNSPMNPEALNTSFIVG*LSRAWP
Trigger: TGGCCAAGCTCTTGACAGTCATCCCACTATGAAGGA...AGTGTTAAGTGCTTCTGGATTCATGGGTGAGTTCCCTGGGCAGCCCCCAGGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp CAGAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTATCCTTCATAGTGGGATaGCTGTCAAGAGCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: QREEEDWTCLGPCSRSLVSFIVG*LSRAWP
Trigger: TGGCCAAGCTCTTGACAGTCATCCCACTATGAAGGA...TACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp CAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACAGCACAGGCAATCAGTCGGTaGGGATTCAGGTGTGGAACT +
Preference number: 4 (lower is better)
Translates to: QPGRSQVNHFTLTSSSTAQAISR*GFRCGT
Trigger: AGTTCCACACCTGAATCCTCACCGACTGATTGCCTG...TGCTGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp ACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCTGCCTATCCGTGGACTCACCGTaGGGACTCAGTGCTTCAGAG +
Preference number: 4 (lower is better)
Translates to: TEGFSSVNFGGRQECSCLSVDSP*GLSASE
Trigger: CTCTGAAGCACTGAGTCCTCACGGTGAGTCCACGGA...TAGGCAGGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp GGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACAGCACTCAGTTACTTGTGGGGATTCTaGCATGCTGTCATCGTGGGC +
Preference number: 4 (lower is better)
Translates to: GRSQVNHFTLTSSSTALSYLWGF*HAVIVG
Trigger: GCCCACGATGACAGCATGTCAGAATCCCCACAAGTA...ACTGAGTGCTGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp CTTTCACATACACAGGTGCGTGGAGATGCCCACTCCCATAGGGTCCAAAGTGACTACTTGTGGGGATTCTaGCATGCTGTCATCGTGGGC +
Preference number: 4 (lower is better)
Translates to: LSHTQVRGDAHSHRVQSDYLWGF*HAVIVG
Trigger: GCCCACGATGACAGCATGTCAGAATCCCCACAAGTA...GTCACTTTGGACCCTATGGGAGTGGGCATCTCCACGCACCTGTGTATGTGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp GGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGGCACGGACTTCCTTCTaGTCTTCACAACTAAAGGAA +
Preference number: 4 (lower is better)
Translates to: GSPMGYTQETPPARPEGSARTSF*SSQLKE
Trigger: TTCCTTTAGTTGTGAAGATCAGAAGGAAGTCCGTGC...CGACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp CTTGGTGGAGAATGCAACCTTCTTGCTTCAGTTTCAAGTCCCTCTGGGAGTCAGCCTGTAACATTGCTCTaGTCACCCAGGGCCCGACCT +
Preference number: 4 (lower is better)
Translates to: LGGECNLLASVSSPSGSQPVTLL*SPRARP
Trigger: AGGTCGGGCCCTGGGTGATCAGAGCAATGTTACAGG...CTGACTCCCAGAGGGACTTGAAACTGAAGCAAGAAGGTTGCATTCTCCACCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp GGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGAAGTCTTCTCATTCTTaGCGCTGCCAACAAAGGCAT +
Preference number: 4 (lower is better)
Translates to: GSPMGYTQETPPARPEGSKSSHS*RCQQRH
Trigger: ATGCCTTTGTTGGCAGCGTCAAGAATGAGAAGACTT...CGACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp GTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTCAATACACAGAGCTTTaGGGGTCCAATACAGTCATC +
Preference number: 4 (lower is better)
Translates to: VSRCTSPLVGNARSYFNPQYTEL*GSNTVI
Trigger: GATGACTGTATTGGACCCTCAAAGCTCTGTGTATTG...AGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp GTCAAAAGTACGTCAAAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGGTCCGTCAACTGGCAAATaGCTCAACTGTGACCCTGAG +
Preference number: 4 (lower is better)
Translates to: VKSTSKGASQSQESMVPGPSTGK*LNCDPE
Trigger: CTCAGGGTCACAGTTGAGTCATTTGCCAGTTGACGG...ACCTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTTTGACGTACTTTTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp AAAAGTACGTCAAAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGGTATTTCCCAGGTATTGCTGTaGCAGGTGGTGACCCTGGAG +
Preference number: 4 (lower is better)
Translates to: KSTSKGASQSQESMVPGISQVLL*QVVTLE
Trigger: CTCCAGGGTCACCACCTGTCACAGCAATACCTGGGA...AATACCTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTTTGACGTACTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR TCA 90 bp GGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCACTCATGCTTCAGATaGCGAAAATGCCACATCAGA +
Preference number: 4 (lower is better)
Translates to: GSPMGYTQETPPARPEGSHSCFR*RKCHIR
Trigger: TCTGATGTGGCATTTTCGTCATCTGAAGCATGAGTG...CGACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp CCGGTCTTTGGTAAACAGACGCTTAAGTTGACAACTTGGACTTGGCCAATACTGGCTTTCCCGCTCTGCTaGGGGACTGAGACAGGACCG +
Preference number: 4 (lower is better)
Translates to: PVFGKQTLKLTTWTWPILAFPLC*GTETGP
Trigger: CGGTCCTGTCTCAGTCCCTCAGCAGAGCGGGAAAGC...CAGTATTGGCCAAGTCCAAGTTGTCAACTTAAGCGTCTGTTTACCAAAGACCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375687.10
ENST00000613218.4
ENST00000651418.1
CDS-3UTR TCA 90 bp TGTAATCCATCCCAGTGCTTTGTGAAGCTGTGGTGGGAAGATCACTTGAGGCCACTCTATCCCAGACCCTaGGGCTCAGCAGGTCTTACG +
Preference number: 4 (lower is better)
Translates to: CNPSQCFVKLWWEDHLRPLYPRP*GSAGLT
Trigger: CGTAAGACCTGCTGAGCCTCAGGGTCTGGGATAGAG...TGGCCTCAAGTGATCTTCCCACCACAGCTTCACAAAGCACTGGGATGGATTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649901.1
CDS-3UTR GCA 90 bp GGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGTCTGCCTCTATGACCTaGAGAATCTGTTTTGGTGTC +
Preference number: 4 (lower is better)
Translates to: GSPMGYTQETPPARPEGSSASMT*RICFGV
Trigger: GACACCAAAACAGATTCTGCAGGTCATAGAGGCAGA...CGACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp CAAGGCAAGGGAAAACACACACAGGGGCATCTACTTGCTGGAAACATGTTGGGAGGATGGCGAGACCACTaGAGGGCATCCTTCTTGAGC +
Preference number: 4 (lower is better)
Translates to: QGKGKHTQGHLLAGNMLGGWRDH*RASFLS
Trigger: GCTCAAGAAGGATGCCCTGCAGTGGTCTCGCCATCC...TCCCAACATGTTTCCAGCAAGTAGATGCCCCTGTGTGTGTTTTCCCTTGCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR GCA 90 bp CAGAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTATGGCCCACGTTCTGCTaGAATGACTCTTCTTTGGTC +
Preference number: 4 (lower is better)
Translates to: QREEEDWTCLGPCSRSLVWPTFC*NDSSLV
Trigger: GACCAAAGAAGAGTCATTGCAGCAGAACGTGGGCCA...TACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR GCA 90 bp GACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTTGGCCCACGTTCTGCTaGAATGACTCTTCTTTGGTC +
Preference number: 4 (lower is better)
Translates to: DPTGHRATWQVTSQSFHPWPTFC*NDSSLV
Trigger: GACCAAAGAAGAGTCATTGCAGCAGAACGTGGGCCA...AGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR GCA 90 bp GGCTGCCCAGGGAACTCACCCATGAATCCAGAAGCACTTAACACTGGTGGTGGTTCCTGGCCCACGTTCTaGTGCAATGACTCTTCTTTG +
Preference number: 4 (lower is better)
Translates to: GCPGNSPMNPEALNTGGGSWPTF*CNDSSL
Trigger: CAAAGAAGAGTCATTGCAGCAGAACGTGGGCCAGGA...ACCACCACCAGTGTTAAGTGCTTCTGGATTCATGGGTGAGTTCCCTGGGCAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR GCA 90 bp GGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACATCCTGGCCCACGTTCTaGTGCAATGACTCTTCTTTG +
Preference number: 4 (lower is better)
Translates to: GQPGRSQVNHFTLTSSSTSWPTF*CNDSSL
Trigger: CAAAGAAGAGTCATTGCAGCAGAACGTGGGCCAGGA...TGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR GCA 90 bp CTGGCATTTCTACTTAGTTCAGGTAGGTTAACTCCCTTGGTGGAGAATGCAACCCTCCAGGTCGGGTGCTaGAGAGGATGTGCCTGGCAG +
Preference number: 4 (lower is better)
Translates to: LAFLLSSGRLTPLVENATLQVGC*RGCAWQ
Trigger: CTGCCAGGCACATCCTCTGCAGCACCCGACCTGGAG...GGTTGCATTCTCCACCAAGGGAGTTAACCTACCTGAACTAAGTAGAAATGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GCCTTGGGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAAATTCTGTCTGGAGATaGAGAGGCACGTGCCAAGTT +
Preference number: 4 (lower is better)
Translates to: ALGSPMGYTQETPPARPENSVWR*RGTCQV
Trigger: AACTTGGCACGTGCCTCTGCATCTCCAGACAGAATT...TTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCCCAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp CAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAATTCTGTCTGGAGATaGAGAGGCACGTGCCAAGTT +
Preference number: 4 (lower is better)
Translates to: QGIGQPGRSQVNHFTLTSNSVWR*RGTCQV
Trigger: AACTTGGCACGTGCCTCTGCATCTCCAGACAGAATT...CGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR GCA 90 bp AGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTAAACCTTTTCGGGAAAGGATaGAGAGGCCGCCTGCTCAAA +
Preference number: 4 (lower is better)
Translates to: REEEDWTCLGPCSRSLVNLFGKG*RGRLLK
Trigger: TTTGAGCAGGCGGCCTCTGCATCCTTTCCCGAAAAG...GTTTACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR GCA 90 bp GCCTTGGGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAAGATCCCTTTGTCACTaGAGCTTCTCTAGTGTCAGC +
Preference number: 4 (lower is better)
Translates to: ALGSPMGYTQETPPARPERSLCH*SFSSVS
Trigger: GCTGACACTAGAGAAGCTGCAGTGACAAAGGGATCT...TTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCCCAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp CAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGATCCCTTTGTCACTaGAGCTTCTCTAGTGTCAGC +
Preference number: 4 (lower is better)
Translates to: QGIGQPGRSQVNHFTLTSRSLCH*SFSSVS
Trigger: GCTGACACTAGAGAAGCTGCAGTGACAAAGGGATCT...CGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GAGAATGCAACCTTCTTGCTTCAGTTTCAAGTCCCTCTGGGAGTCAGGCAGTCCGTGGGGATTCTGACATaGTGTCATCGTGGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: ENATFLLQFQVPLGVRQSVGILT*CHRGLV
Trigger: CACCAGCCCACGATGACAGCATGTCAGAATCCCCAC...GGACTGCCTGACTCCCAGAGGGACTTGAAACTGAAGCAAGAAGGTTGCATTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GCCTTGGGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAATTAAAGAACTGGGGCTaGTTCCATCAACCATGCCAC +
Preference number: 4 (lower is better)
Translates to: ALGSPMGYTQETPPARPELKNWG*FHQPCH
Trigger: GTGGCATGGTTGATGGAAGCAGCCCCAGTTCTTTAA...TTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCCCAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTTCCTGGCAAGACCAGTaGCTGTTTCACAGCTATCTG +
Preference number: 4 (lower is better)
Translates to: DPTGHRATWQVTSQSFHPSWQDQ*LFHSYL
Trigger: CAGATAGCTGTGAAACAGGCACTGGTCTTGCCAGGA...AGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp CCAGCAGAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTAACTTGGGACTGCCTTaGAATTCTTTTGGGGTGCTC +
Preference number: 4 (lower is better)
Translates to: PAEGRRGLDMFGPLFPVFNLGLP*NSFGVL
Trigger: GAGCACCCCAAAAGAATTGCAAGGCAGTCCCAAGTT...AAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTCTGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp AGATCAGTGTCAAACTGTACCCTTGAGTGTCCCCAAAGGTTCCAGCAGAGGGAAAGGGCCCGACCTGTCTaGTCTGGACCAAAGGAGATC +
Preference number: 4 (lower is better)
Translates to: RSVSNCTLECPQRFQQRERARPV*SGPKEI
Trigger: GATCTCCTTTGGTCCAGAGCAGACAGGTCGGGCCCT...TTCCCTCTGCTGGAACCTTTGGGGACACTCAAGGGTACAGTTTGACACTGATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACACAGACATGGAGTTTGTaGTTGGTCCCAACTTCCCAC +
Preference number: 4 (lower is better)
Translates to: GQPGRSQVNHFTLTSSSTQTWSL*LVPTSH
Trigger: GTGGGAAGTTGGGACCAAGCACAAACTCCATGTCTG...TGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp AAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGGTATTGCTGTGACAGGTAGTTCCAGGGGACTATaGCCAGTAGCTTTCCTGTTC +
Preference number: 4 (lower is better)
Translates to: KGASQSQESMVPGIAVTGSSRGL*PVAFLF
Trigger: GAACAGGAAAGCTACTGGGCATAGTCCCCTGGAACT...ACCTGTCACAGCAATACCTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GTGACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCTGCTCATGGCTTTCAGGCTaGACGCACACTGGAGCGAGA +
Preference number: 4 (lower is better)
Translates to: VTEGFSSVNFGGRQECSCSWLSG*THTGAR
Trigger: TCTCGCTCCAGTGTGCGTGCAGCCTGAAAGCCATGA...GCAGGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGTCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp TCAATCATTTCACCCTCACGTCGAGCAGCACAGCACTCAGTGGCTCTGACAACATCATGGCTTTCAGGCTaGACGCACACTGGAGCGAGA +
Preference number: 4 (lower is better)
Translates to: SIISPSRRAAQHSVALTTSWLSG*THTGAR
Trigger: TCTCGCTCCAGTGTGCGTGCAGCCTGAAAGCCATGA...TGTTGTCAGAGCCACTGAGTGCTGTGCTGCTCGACGTGAGGGTGAAATGATTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GAGATGCCCACTCCCATAGGGTCCAAAGTGACAGGGAGGATGTCAAGCAGAGGAGGGGGAAGGCAAGAGTaGTCCTGCCTAAAGAGTATT +
Preference number: 4 (lower is better)
Translates to: EMPTPIGSKVTGRMSSRGGGRQE*SCLKSI
Trigger: AATACTCTTTAGGCAGGAGCACTCTTGCCTTCCCCC...TCCTCTGCTTGACATCCTCCCTGTCACTTTGGACCCTATGGGAGTGGGCATCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GGCTGCCCAGGGAACTCACCCATGAATCCAGAAGCACTTAACACTGGTGGTGGTGGGGGAAGGCAAGAGTaGTCCTGCCTAAAGAGTATT +
Preference number: 4 (lower is better)
Translates to: GCPGNSPMNPEALNTGGGGGRQE*SCLKSI
Trigger: AATACTCTTTAGGCAGGAGCACTCTTGCCTTCCCCC...ACCACCACCAGTGTTAAGTGCTTCTGGATTCATGGGTGAGTTCCCTGGGCAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp CAAGTGACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCCGCAACCCCACTCCGTaGCACATCAGGCTCTGTCTT +
Preference number: 4 (lower is better)
Translates to: QVTEGFSSVNFGGRQECSRNPTP*HIRLCL
Trigger: AAGACAGAGCCTGATGTGGCACGGAGTGGGGTTGCG...GGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGTCACTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp CCAGCCGGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCAAGAATGCAACCTTCTTaGTTCAGTTTCAAGTCCCTC +
Preference number: 4 (lower is better)
Translates to: PAGDPTGHRATWQVTSQSRMQPS*FSFKSL
Trigger: GAGGGACTTGAAACTGAAGCAAGAAGGTTGCATTCT...TGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACCGGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GGGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCTCCCTTGGTGGAGAATaGAACCTTCTTGCTTCAGTT +
Preference number: 4 (lower is better)
Translates to: GQPNGLYPGNPSSKTRRVSLGGE*NLLASV
Trigger: AACTGAAGCAAGAAGGTTGCATTCTCCACCAAGGGA...GACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp AGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCCAAGTGACAGAGGGCTTTAGCGTTACTTTAACCCTGTaGTGGCTTCTTTCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: RKPLQQDQKGRQVTEGFSVTLTL*WLLSWP
Trigger: TGGCCAGGAAAGAAGCCAGCACAGGGTTAAAGTAAC...GCTAAAGCCCTCTGTCACTTGGCGACCCTTCTGGTCTTGCTGGAGGGGTTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp TGTAATCCATCCCAGTGCTTTGTGAAGCTGTGGTGGGAAGATCACTTGAGGCCAGTGAATGAACGAAGCTaGCCCAGACCCCCAGACGCT +
Preference number: 4 (lower is better)
Translates to: CNPSQCFVKLWWEDHLRPVNERS*PRPPDA
Trigger: AGCGTCTGGGGGTCTGGGGCAGCTTCGTTCATTCAC...TGGCCTCAAGTGATCTTCCCACCACAGCTTCACAAAGCACTGGGATGGATTACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000645035.1
ENST00000649901.1
CDS-3UTR GCA 90 bp TGTAATCCATCCCAGTGCTTTGTGAAGCTGTGGTGGGAAGATCACTTGAGGCCACTGGGAGTAAGCACTTaGTTCCCTCCACGCACCTGG +
Preference number: 4 (lower is better)
Translates to: CNPSQCFVKLWWEDHLRPLGVST*FPPRTW
Trigger: CCAGGTGCGTGGAGGGAAGCAAGTGCTTACTCCCAG...TGGCCTCAAGTGATCTTCCCACCACAGCTTCACAAAGCACTGGGATGGATTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649901.1
CDS-3UTR GCA 90 bp TTCACCACTCACAGTGCTGGCTTCATTAGACCCACAGCTCTCCACATCAGCCGTGGATGGCGAGACCACTaGAGGGCATCCTTCTGTAAT +
Preference number: 4 (lower is better)
Translates to: FTTHSAGFIRPTALHISRGWRDH*RASFCN
Trigger: ATTACAGAAGGATGCCCTGCAGTGGTCTCGCCATCC...ACGGCTGATGTGGAGAGCTGTGGGTCTAATGAAGCCAGCACTGTGAGTGGTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644587.1
CDS-3UTR CCA 90 bp GCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGTGCCTGTTTTGGTGTCATTaGAGCATCCGAGTAGTTTTC +
Preference number: 4 (lower is better)
Translates to: AGAPAPWWAMPGVTLTLCLFWCH*SIRVVF
Trigger: GAAAACTACTCGGATGCTCCAATGACACCAAAACAG...GCACAGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CAAGGCAAGGGAAAACACACACAGGGGCATCTACTTGCTGGAAACATGTTGGGATCCACTGTAGCTGGATaGCGAGACCACTGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: QGKGKHTQGHLLAGNMLGSTVAG*RDHCRA
Trigger: TGCCCTGCAGTGGTCTCGCCATCCAGCTACAGTGGA...TCCCAACATGTTTCCAGCAAGTAGATGCCCCTGTGTGTGTTTTCCCTTGCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp TTTGTTTGTTCGCCTGTGAGGAAGCTCTGTAGCTGTCCCTGGGATTGGAAAGAGATCAGCCGTGTCCTCTaGCTCCTCTCCCTCCACTGT +
Preference number: 4 (lower is better)
Translates to: FVCSPVRKLCSCPWDWKEISRVL*LLSLHC
Trigger: ACAGTGGAGGGAGAGGAGCCAGAGGACACGGCTGAT...CTCTTTCCAATCCCAGGGACAGCTACAGAGCTTCCTCACAGGCGAACAAACAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644587.1
CDS-3UTR CCA 90 bp TGTAGGAGGAGAGATGTGAAAAGCAAGATGCGTTTGCTCGGTGGCATGTGGGCACATTTGACCTGTGGCTaGCTTCCGGAAGCCTCTCAG +
Preference number: 4 (lower is better)
Translates to: CRRRDVKSKMRLLGGMWAHLTCG*LPEASQ
Trigger: CTGAGAGGCTTCCGGAAGCCAGCCACAGGTCAAATG...TGCCCACATGCCACCGAGCAAACGCATCTTGCTTTTCACATCTCTCCTCCTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000651418.1
CDS-3UTR CCA 90 bp TCAATCATTTCACCCTCACGTCGAGCAGCACAGCACTCAGTGGCTCTGACAACAGCTTCATTTGACCTGTaGCTGGCTTCCGGAAGCCTC +
Preference number: 4 (lower is better)
Translates to: SIISPSRRAAQHSVALTTASFDL*LASGSL
Trigger: GAGGCTTCCGGAAGCCAGCCACAGGTCAAATGAAGC...TGTTGTCAGAGCCACTGAGTGCTGTGCTGCTCGACGTGAGGGTGAAATGATTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
CDS-3UTR CCA 90 bp GAGAGGCAGGAGCAGGCATGGCTTTGTTTCTTCCCAAACCTGCCTGATGTCAAAGCTTCATTTGACCTGTaGCTGGCTTCCGGAAGCCTC +
Preference number: 4 (lower is better)
Translates to: ERQEQAWLCFFPNLPDVKASFDL*LASGSL
Trigger: GAGGCTTCCGGAAGCCAGCCACAGGTCAAATGAAGC...TTTGACATCAGGCAGGTTTGGGAAGAAACAAAGCCATGCCTGCTCCTGCCTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000651418.1
CDS-3UTR CCA 90 bp CAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGTGTGATGGTAAGGCATaGAAGGTCCGAGAGTTGATC +
Preference number: 4 (lower is better)
Translates to: QGIGQPGRSQVNHFTLTSCDGKA*KVRELI
Trigger: GATCAACTCTCGGACCTTCCATGCCTTACCATCACA...CGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp CCAGCAGAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTTGTGATGGTAAGGCATaGAAGGTCCGAGAGTTGATC +
Preference number: 4 (lower is better)
Translates to: PAEGRRGLDMFGPLFPVFCDGKA*KVRELI
Trigger: GATCAACTCTCGGACCTTCCATGCCTTACCATCACA...AAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTCTGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp CAGAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTAAAGAGGAGCTGCTGCTaGAAGTGTGATGGTAAGGCA +
Preference number: 4 (lower is better)
Translates to: QREEEDWTCLGPCSRSLVKRSCC*KCDGKA
Trigger: TGCCTTACCATCACACTTCCAGCAGCAGCTCCTCTT...TACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp GGCTGCCCAGGGAACTCACCCATGAATCCAGAAGCACTTAACACTGGTGGTGGTAAGAGGAGCTGCTGCTaGAAGTGTGATGGTAAGGCA +
Preference number: 4 (lower is better)
Translates to: GCPGNSPMNPEALNTGGGKRSCC*KCDGKA
Trigger: TGCCTTACCATCACACTTCCAGCAGCAGCTCCTCTT...ACCACCACCAGTGTTAAGTGCTTCTGGATTCATGGGTGAGTTCCCTGGGCAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp TCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGGCAATGACTCTTCTTTaGTCAAACCCAGCTTCTGTC +
Preference number: 4 (lower is better)
Translates to: SAGAPAPWWAMPGVTLTLAMTLL*SNPASV
Trigger: GACAGAAGCTGGGTTTGACCAAAGAAGAGTCATTGC...CAGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACAGCAATTTCAGCCTCCTCCTaGCCCACGTTCTGCTGCAAT +
Preference number: 4 (lower is better)
Translates to: QPGRSQVNHFTLTSSSTAISASS*PTFCCN
Trigger: ATTGCAGCAGAACGTGGGCCAGGAGGAGGCTGAAAT...TGCTGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp GTCAAAAGTACGTCAAAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGGTATTTCAGCCTCCTCCTaGCCCACGTTCTGCTGCAAT +
Preference number: 4 (lower is better)
Translates to: VKSTSKGASQSQESMVPGISASS*PTFCCN
Trigger: ATTGCAGCAGAACGTGGGCCAGGAGGAGGCTGAAAT...ACCTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTTTGACGTACTTTTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp AACAAGGCAAGGGAAAACACACACAGGGGCATCTACTTGCTGGAAACATGTTGGGATGTGCCTGGCAGATaGGGACTGCTCAGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: NKARENTHRGIYLLETCWDVPGR*GLLSPA
Trigger: AGCAGGGCTGAGCAGTCCCCATCTGCCAGGCACATC...CCAACATGTTTCCAGCAAGTAGATGCCCCTGTGTGTGTTTTCCCTTGCCTTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp GTGACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCTGCAGCCACAGACTCAACTaGGAATTCGGGACCCTCCAG +
Preference number: 4 (lower is better)
Translates to: VTEGFSSVNFGGRQECSCSHRLN*EFGTLQ
Trigger: CTGGAGGGTCCCGAATTCCCAGTTGAGTCTGTGGCT...GCAGGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGTCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp TCAATCATTTCACCCTCACGTCGAGCAGCACAGCACTCAGTGGCTCTGACAACAAGCCACAGACTCAACTaGGAATTCGGGACCCTCCAG +
Preference number: 4 (lower is better)
Translates to: SIISPSRRAAQHSVALTTSHRLN*EFGTLQ
Trigger: CTGGAGGGTCCCGAATTCCCAGTTGAGTCTGTGGCT...TGTTGTCAGAGCCACTGAGTGCTGTGCTGCTCGACGTGAGGGTGAAATGATTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp TGTAGGAGGAGAGATGTGAAAAGCAAGATGCGTTTGCTCGGTGGCATGTGGGCAAGCCACAGACTCAACTaGGAATTCGGGACCCTCCAG +
Preference number: 4 (lower is better)
Translates to: CRRRDVKSKMRLLGGMWASHRLN*EFGTLQ
Trigger: CTGGAGGGTCCCGAATTCCCAGTTGAGTCTGTGGCT...TGCCCACATGCCACCGAGCAAACGCATCTTGCTTTTCACATCTCTCCTCCTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp ATGTCAAAAGTACGTCAAAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGTTGTCTGGCTCAGCCTaGATCCGAGAAGCCACAGAC +
Preference number: 4 (lower is better)
Translates to: MSKVRQKEPHSPRRAWSQLSGSA*IREATD
Trigger: GTCTGTGGCTTCTCGGATCCAGGCTGAGCCAGACAA...CTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTTTGACGTACTTTTGACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp CTTTCACATACACAGGTGCGTGGAGATGCCCACTCCCATAGGGTCCAAAGTGACGCTAGGAATTCTGTCTaGAGATGCAGAGGCACGTGC +
Preference number: 4 (lower is better)
Translates to: LSHTQVRGDAHSHRVQSDARNSV*RCRGTC
Trigger: GCACGTGCCTCTGCATCTCCAGACAGAATTCCTAGC...GTCACTTTGGACCCTATGGGAGTGGGCATCTCCACGCACCTGTGTATGTGAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp AGGTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCTCCTCTTCTGATCCTTaGGTTCCTGATCCACAGTTT +
Preference number: 4 (lower is better)
Translates to: RSAGAPAPWWAMPGVTLTSSSDP*VPDPQF
Trigger: AAACTGTGGATCAGGAACCCAAGGATCAGAAGAGGA...GGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GCCGGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCTCTTTAGTGGGCTGTaGCTTTTCGGTGTGAACACT +
Preference number: 4 (lower is better)
Translates to: AGDPTGHRATWQVTSQSFLFSGL*LFGVNT
Trigger: AGTGTTCACACCGAAAAGCCACAGCCCACTAAAGAG...AAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACCGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp CAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACAGCAAAAGTTGAATCCGGATaGGCGGGACTTTGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: QPGRSQVNHFTLTSSSTAKVESG*AGLWAP
Trigger: AGGAGCCCAAAGTCCCGCCCATCCGGATTCAACTTT...TGCTGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp GGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACAGCACTCAGTATGGCAGTTCCGGCCTaGGTATGCTCCCCATTTAGA +
Preference number: 4 (lower is better)
Translates to: GRSQVNHFTLTSSSTALSMAVPA*VCSPFR
Trigger: TCTAAATGGGGAGCATACCCAGGCCGGAACTGCCAT...ACTGAGTGCTGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp AGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTAAACTCAGCTACTGAGGTTTaGGAGGACAGTAGGGGCAAG +
Preference number: 4 (lower is better)
Translates to: REEEDWTCLGPCSRSLVNSATEV*EDSRGK
Trigger: CTTGCCCCTACTGTCCTCCCAAACCTCAGTAGCTGA...GTTTACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GTCAAAAGTACGTCAAAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGGTTCAGCTACTGAGGTTTaGGAGGACAGTAGGGGCAAG +
Preference number: 4 (lower is better)
Translates to: VKSTSKGASQSQESMVPGSATEV*EDSRGK
Trigger: CTTGCCCCTACTGTCCTCCCAAACCTCAGTAGCTGA...ACCTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTTTGACGTACTTTTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GGCTGCCCAGGGAACTCACCCATGAATCCAGAAGCACTTAACACTGGTGGTGGTCACTTTCCCAGGAAGTaGTGCCAGACTCACATTCAG +
Preference number: 4 (lower is better)
Translates to: GCPGNSPMNPEALNTGGGHFPRK*CQTHIQ
Trigger: CTGAATGTGAGTCTGGCACCACTTCCTGGGAAAGTG...ACCACCACCAGTGTTAAGTGCTTCTGGATTCATGGGTGAGTTCCCTGGGCAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp AGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTAAACTGTCTGCAGGAACGGTaGGTCCTTGCTCCTCATCAT +
Preference number: 4 (lower is better)
Translates to: REEEDWTCLGPCSRSLVNCLQER*VLAPHH
Trigger: ATGATGAGGAGCAAGGACCCACCGTTCCTGCAGACA...GTTTACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACACCACTAGAGACGGAATaGGACCATTGTCTGCAGGAA +
Preference number: 4 (lower is better)
Translates to: GQPGRSQVNHFTLTSSSTPLETE*DHCLQE
Trigger: TTCCTGCAGACAATGGTCCCATTCCGTCTCTAGTGG...TGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGATTCAGGTGTGGAACTaGGGGTCACATTTACAGGAT +
Preference number: 4 (lower is better)
Translates to: GSPMGYTQETPPARPEGSIQVWN*GSHLQD
Trigger: ATCCTGTAAATGTGACCCCCAGTTCCACACCTGAAT...CGACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp AGGTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCATTCAGGTGTGGAACTaGGGGTCACATTTACAGGAT +
Preference number: 4 (lower is better)
Translates to: RSAGAPAPWWAMPGVTLTIQVWN*GSHLQD
Trigger: ATCCTGTAAATGTGACCCCCAGTTCCACACCTGAAT...GGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CCAGCCGGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATACCTCATCATTCGATaGGATGGGTATCCAATGCAA +
Preference number: 4 (lower is better)
Translates to: PAGDPTGHRATWQVTSQSYLIIR*DGYPMQ
Trigger: TTGCATTGGATACCCATCCCATCGAATGATGAGGTA...TGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACCGGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GGGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCCTCTGGATTCTGGTTTaGGCTGTTTCACTACCTCAT +
Preference number: 4 (lower is better)
Translates to: GQPNGLYPGNPSSKTRRVLWILV*AVSLPH
Trigger: ATGAGGTAGTGAAACAGCCCAAACCAGAATCCAGAG...GACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp TCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGGTGTTCTCTGGATTCTaGTTTGGGCTGTTTCACTAC +
Preference number: 4 (lower is better)
Translates to: SAGAPAPWWAMPGVTLTLVFSGF*FGLFHY
Trigger: GTAGTGAAACAGCCCAAACCAGAATCCAGAGAACAC...CAGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GCCTTGGGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAACTGGGGCTCAACAGATaGTATGTGTTCTCTGGATTC +
Preference number: 4 (lower is better)
Translates to: ALGSPMGYTQETPPARPELGLNR*YVFSGF
Trigger: GAATCCAGAGAACACATACCATCTGTTGAGCCCCAG...TTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCCCAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CAAGGCAAGGGAAAACACACACAGGGGCATCTACTTGCTGGAAACATGTTGGGAGCAATGCAGGAGGGGTaGGAGCAGCTTTCTCCCACT +
Preference number: 4 (lower is better)
Translates to: QGKGKHTQGHLLAGNMLGAMQEG*EQLSPT
Trigger: AGTGGGAGAAAGCTGCTCCCACCCCTCCTGCATTGC...TCCCAACATGTTTCCAGCAAGTAGATGCCCCTGTGTGTGTTTTCCCTTGCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp ACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCTGCCTAGCAATGCAGGAGGGGTaGGAGCAGCTTTCTCCCACT +
Preference number: 4 (lower is better)
Translates to: TEGFSSVNFGGRQECSCLAMQEG*EQLSPT
Trigger: AGTGGGAGAAAGCTGCTCCCACCCCTCCTGCATTGC...TAGGCAGGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GAGAATGCAACCTTCTTGCTTCAGTTTCAAGTCCCTCTGGGAGTCAGGCAGTCCCAGAGGCTGTATCCGTaGACTCACCGTGAGGACTCA +
Preference number: 4 (lower is better)
Translates to: ENATFLLQFQVPLGVRQSQRLYP*THREDS
Trigger: TGAGTCCTCACGGTGAGTCCACGGATACAGCCTCTG...GGACTGCCTGACTCCCAGAGGGACTTGAAACTGAAGCAAGAAGGTTGCATTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGTGCCAGATTGGTTCCAATTaGGTTTCTCATCCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: AGAPAPWWAMPGVTLTLCQIGSN*VSHPCP
Trigger: TGGACAAGGATGAGAAACCCAATTGGAACCAATCTG...GCACAGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTATTCACCTTGGACAGTaGGGCAGATTGGTTCCAATT +
Preference number: 4 (lower is better)
Translates to: VSRCTSPLVGNARSYFNPIHLGQ*GRLVPI
Trigger: AATTGGAACCAATCTGCCCCACTGTCCAAGGTGAAT...AGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACGAATCTGGGATCTTTTaGCGGACCGCACATACTCGA +
Preference number: 4 (lower is better)
Translates to: GDPTGHRATWQVTSQSFHESGIF*RTAHTR
Trigger: TCGAGTATGTGCGGTCCGCCAAAAGATCCCAGATTC...GTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp ACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCTGCCTACACACGGCTCTTGGCTaGTACTCAGTACTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: TEGFSSVNFGGRQECSCLHTALG*YSVLAS
Trigger: GCTGGCCAGTACTGAGTACCAGCCAAGAGCCGTGTG...TAGGCAGGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GGGGGTAGTGGAAGACTGGCATTTCTACTTAGTTCAGGTAGGTTAACTCCCTTGCTGAGGACCCAGGCATaGACAGGCACACGGCTCTTG +
Preference number: 4 (lower is better)
Translates to: GGSGRLAFLLSSGRLTPLLRTQA*TGTRLL
Trigger: CAAGAGCCGTGTGCCTGTCCATGCCTGGGTCCTCAG...CAAGGGAGTTAACCTACCTGAACTAAGTAGAAATGCCAGTCTTCCACTACCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACAGCAGACATGCTGTCATCGTaGGCTGGTGGAAGAACCTTC +
Preference number: 4 (lower is better)
Translates to: QPGRSQVNHFTLTSSSTADMLSS*AGGRTF
Trigger: GAAGGTTCTTCCACCAGCCCACGATGACAGCATGTC...TGCTGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTAAAGACATGCTGTCATCGTaGGCTGGTGGAAGAACCTTC +
Preference number: 4 (lower is better)
Translates to: EGRRGLDMFGPLFPVFGKDMLSS*AGGRTF
Trigger: GAAGGTTCTTCCACCAGCCCACGATGACAGCATGTC...TTTACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CCAGCAGAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTAGCGAGCCATGGCTCTaGTCTTTTGTAAGTGGTACT +
Preference number: 4 (lower is better)
Translates to: PAEGRRGLDMFGPLFPVFSEPWL*SFVSGT
Trigger: AGTACCACTTACAAAAGACCAGAGCCATGGCTCGCT...AAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTCTGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp AGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCCAAGTGACAGAGGGCTTTAGCAAGCCCTTAAAGAACTaGGGCTGCTTCCATCAACCA +
Preference number: 4 (lower is better)
Translates to: RKPLQQDQKGRQVTEGFSKPLKN*GCFHQP
Trigger: TGGTTGATGGAAGCAGCCCCAGTTCTTTAAGGGCTT...GCTAAAGCCCTCTGTCACTTGGCGACCCTTCTGGTCTTGCTGGAGGGGTTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp TCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCCTGTGTTTCACAGCTATCTaGCAGAAGAGGCTCCTTCAA +
Preference number: 4 (lower is better)
Translates to: SAGAPAPWWAMPGVTLTLCFTAI*QKRLLQ
Trigger: TTGAAGGAGCCTCTTCTGCCAGATAGCTGTGAAACA...CAGGGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp AGGTCAGCAGGTGCACCAGCCCCCTGGTGGGCAATGCCAGGAGTTACTTTAACCGAGGGAGTCAAAACTTaGGACTGCCTTGCAATTCTT +
Preference number: 4 (lower is better)
Translates to: RSAGAPAPWWAMPGVTLTEGVKT*DCLAIL
Trigger: AAGAATTGCAAGGCAGTCCCAAGTTTTGACTCCCTC...GGTTAAAGTAACTCCTGGCATTGCCCACCAGGGGGCTGGTGCACCTGCTGACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CCAGCAGAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGATTTGTCACTGGATaGAGGGAGTCAAAACTTGGG +
Preference number: 4 (lower is better)
Translates to: PAEGRRGLDMFGPLFPVFGFVTG*RESKLG
Trigger: CCCAAGTTTTGACTCCCTCCATCCAGTGACAAATCC...AAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTCTGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTAAACATGGAGTTTGTGCTTaGTCCCAACTTCCCACTGGG +
Preference number: 4 (lower is better)
Translates to: EGRRGLDMFGPLFPVFGKHGVCA*SQLPTG
Trigger: CCCAGTGGGAAGTTGGGACCAAGCACAAACTCCATG...TTTACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GTCAAAAGTACGTCAAAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGGTGTACCCCACCAGACATaGAGTTTGTGCTTGGTCCCA +
Preference number: 4 (lower is better)
Translates to: VKSTSKGASQSQESMVPGVPHQT*SLCLVP
Trigger: TGGGACCAAGCACAAACTCCATGTCTGGTGGGGTAC...ACCTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTTTGACGTACTTTTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GTCAAAAGTACGTCAAAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGGTAAAGGCATGTGGCTTTaGAGCCCAGTCTTCCCTTGG +
Preference number: 4 (lower is better)
Translates to: VKSTSKGASQSQESMVPGKGMWL*SPVFPW
Trigger: CCAAGGGAAGACTGGGCTCCAAAGCCACATGCCTTT...ACCTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTTTGACGTACTTTTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCCAACCAAAGTTTGCTTTGTaGCTCAGCTGCACCACACTT +
Preference number: 4 (lower is better)
Translates to: AQWVIPRKPLQQDQKGRQPKFAL*LSCTTL
Trigger: AAGTGTGGTGCAGCTGAGCCACAAAGCAAACTTTGG...TTGGCGACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGCCAAAGTTTGCTTTGTaGCTCAGCTGCACCACACTT +
Preference number: 4 (lower is better)
Translates to: QGIGQPGRSQVNHFTLTSPKFAL*LSCTTL
Trigger: AAGTGTGGTGCAGCTGAGCCACAAAGCAAACTTTGG...CGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CCGGTCTTTGGTAAACAGACGCTTAAGTTGACAACTTGGACTTGGCCAATACTGAGAGCTCAGGCTGGCTaGCCTTGGGCAGCCCAATGG +
Preference number: 4 (lower is better)
Translates to: PVFGKQTLKLTTWTWPILRAQAG*PWAAQW
Trigger: CCATTGGGCTGCCCAAGGCCAGCCAGCCTGAGCTCT...CAGTATTGGCCAAGTCCAAGTTGTCAACTTAAGCGTCTGTTTACCAAAGACCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GGGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGGGGTAGTGGAAGACTaGCATTTCTACTTAGTTCAG +
Preference number: 4 (lower is better)
Translates to: GQPNGLYPGNPSSKTRRVGVVED*HFYLVQ
Trigger: CTGAACTAAGTAGAAATGCCAGTCTTCCACTACCCC...GACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACATCACCTGCAAACATCTaGACGGCTGACTCACAAGGT +
Preference number: 4 (lower is better)
Translates to: GQPGRSQVNHFTLTSSSTSPANI*TADSQG
Trigger: ACCTTGTGAGTCAGCCGTCCAGATGTTTGCAGGTGA...TGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CTTGGTGGAGAATGCAACCTTCTTGCTTCAGTTTCAAGTCCCTCTGGGAGTCAGGATGCGTTTGCTCGGTaGCATGTGGGCAGGCTGACT +
Preference number: 4 (lower is better)
Translates to: LGGECNLLASVSSPSGSQDAFAR*HVGRLT
Trigger: AGTCAGCCTGCCCACATGCCACCGAGCAAACGCATC...CTGACTCCCAGAGGGACTTGAAACTGAAGCAAGAAGGTTGCATTCTCCACCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTAGGCAGGAGCAGGCATaGCTTTGTTTCTTCCCAAAC +
Preference number: 4 (lower is better)
Translates to: DPTGHRATWQVTSQSFHPRQEQA*LCFFPN
Trigger: GTTTGGGAAGAAACAAAGCCATGCCTGCTCCTGCCT...AGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp AAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGGTATTGCTGTGACAGGTAGGCAGGAGCAGGCATaGCTTTGTTTCTTCCCAAAC +
Preference number: 4 (lower is better)
Translates to: KGASQSQESMVPGIAVTGRQEQA*LCFFPN
Trigger: GTTTGGGAAGAAACAAAGCCATGCCTGCTCCTGCCT...ACCTGTCACAGCAATACCTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp GGCTGCCCAGGGAACTCACCCATGAATCCAGAAGCACTTAACACTGGTGGTGGTAGGCAGGAGCAGGCATaGCTTTGTTTCTTCCCAAAC +
Preference number: 4 (lower is better)
Translates to: GCPGNSPMNPEALNTGGGRQEQA*LCFFPN
Trigger: GTTTGGGAAGAAACAAAGCCATGCCTGCTCCTGCCT...ACCACCACCAGTGTTAAGTGCTTCTGGATTCATGGGTGAGTTCCCTGGGCAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp CAGGTCCAGCCGGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCTTGACAACTTGGACTTaGCCAATACTGCATTCTAAA +
Preference number: 4 (lower is better)
Translates to: QVQPVTQQGIGQPGRSQVLTTWT*PILHSK
Trigger: TTTAGAATGCAGTATTGGCCAAGTCCAAGTTGTCAA...GACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACCGGCTGGACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR CCA 90 bp CTTTCACATACACAGGTGCGTGGAGATGCCCACTCCCATAGGGTCCAAAGTGACAGGGAAGAAGAGGACTaGACATGTTTGGGCCCCTGT +
Preference number: 4 (lower is better)
Translates to: LSHTQVRGDAHSHRVQSDREEED*TCLGPC
Trigger: ACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCT...GTCACTTTGGACCCTATGGGAGTGGGCATCTCCACGCACCTGTGTATGTGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp GGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACAGCACTCAGTAGGGAAGAAGAGGACTaGACATGTTTGGGCCCCTGT +
Preference number: 4 (lower is better)
Translates to: GRSQVNHFTLTSSSTALSREEED*TCLGPC
Trigger: ACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCT...ACTGAGTGCTGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR CCA 90 bp CAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACAGCACTCTGGGCAGCCTCATaGACCAGATCAGTGTCAAAC +
Preference number: 4 (lower is better)
Translates to: QPGRSQVNHFTLTSSSTALWAAS*TRSVSN
Trigger: GTTTGACACTGATCTGGTCCATGAGGCTGCCCAGAG...TGCTGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
3UTR CAA 72 bp CAGCCTCATGGACCAGATCAGTGTCAAACTGTACCCTaGAGTGTCCCCAAAGGTTCCAGCAGAGGGAAGAAG +
Preference number: 4 (lower is better)
Translates to: QPHGPDQCQTVP*SVPKGSSRGKK
Trigger: CTTCTTCCCTCTGCTGGAACCTTTGGGGACACTCAAGGGTACAGTTTGACACTGATCTGGTCCATGAGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR TCA 90 bp GGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACAGTCCTCTGACGCTCTaGACACAAAATTCACAACCC +
Preference number: 4 (lower is better)
Translates to: GDPTGHRATWQVTSQSFHSPLTL*TQNSQP
Trigger: GGGTTGTGAATTTTGTGTTCAGAGCGTCAGAGGACT...GTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306058.9
CDS-3UTR TCA 90 bp GAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTAAATTGTTTGTTCGCCTGTaGGGAAGCTCTGTAGCTGTC +
Preference number: 4 (lower is better)
Translates to: EGRRGLDMFGPLFPVFGKLFVRL*GSSVAV
Trigger: GACAGCTACAGAGCTTCCTCACAGGCGAACAAACAA...TTTACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR TCA 90 bp GCAAGAACCCTCAACTCTGTAATAAGTCGAAATACAAGATATAAGGCAGGAAACGGGCAGGGTCCTGGGTaGCCTCGGCCTGGCCACGAA +
Preference number: 4 (lower is better)
Translates to: ARTLNSVISRNTRYKAGNGQGPG*PRPGHE
Trigger: TTCGTGGCCAGGCCGAGGTCACCCAGGACCCTGCCC...GTTTCCTGCCTTATATCTTGTATTTCGACTTATTACAGAGTTGAGGGTTCTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000651418.1
CDS-3UTR TCA 90 bp GGGGGTAGTGGAAGACTGGCATTTCTACTTAGTTCAGGTAGGTTAACTCCCTTGTTAGTGCACTGCTGCTaGGACGCAACAGGCCATCCG +
Preference number: 4 (lower is better)
Translates to: GGSGRLAFLLSSGRLTPLLVHCC*DATGHP
Trigger: CGGATGGCCTGTTGCGTCTCAGCAGCAGTGCACTAA...CAAGGGAGTTAACCTACCTGAACTAAGTAGAAATGCCAGTCTTCCACTACCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp GCCTTGGGCAGCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAACTGACTTGCATCTCATaGGTAAATTCACCATCAGCC +
Preference number: 4 (lower is better)
Translates to: ALGSPMGYTQETPPARPELTCIS*VNSPSA
Trigger: GGCTGATGGTGAATTTACTCATGAGATGCAAGTCAG...TTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGCTGCCCAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp CAGAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTACACGTTCTGCTGCAATaGCTCTTCTTTGGTCAAACC +
Preference number: 4 (lower is better)
Translates to: QREEEDWTCLGPCSRSLVHVLLQ*LFFGQT
Trigger: GGTTTGACCAAAGAAGAGTCATTGCAGCAGAACGTG...TACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR TCA 90 bp GTGACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCTGCCACACAAGCCACTTTTaGTTTCAGCCTCCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: VTEGFSSVNFGGRQECSCHTSHF*FQPPPG
Trigger: GCCAGGAGGAGGCTGAAATCAAAAGTGGCTTGTGTG...GCAGGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp CAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGAGCAGCACAGCAACGCTGTATACGCACTaGTTCTCCTGGGACACACAA +
Preference number: 4 (lower is better)
Translates to: QPGRSQVNHFTLTSSSTATLYTH*FSWDTQ
Trigger: TTGTGTGTCCCAGGAGAATCAGTGCGTATACAGCGT...TGCTGTGCTGCTCGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR TCA 90 bp GAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTAAAGTAGAGGGGAACATCTaGGGCCACAGATTTTGCATC +
Preference number: 4 (lower is better)
Translates to: EGRRGLDMFGPLFPVFGKVEGNI*GHRFCI
Trigger: GATGCAAAATCTGTGGCCTCAGATGTTCCCCTCTAC...TTTACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR TCA 90 bp AGTGGAAGACTGGCATTTCTACTTAGTTCAGGTAGGTTAACTCCCTTGGTGGAGACTCCGTGGTGGGGATaGTCCGGGGGCATATCTGGT +
Preference number: 4 (lower is better)
Translates to: SGRLAFLLSSGRLTPLVETPWWG*SGGISG
Trigger: ACCAGATATGCCCCCGGATCATCCCCACCACGGAGT...CTCCACCAAGGGAGTTAACCTACCTGAACTAAGTAGAAATGCCAGTCTTCCACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp CATGGCTTTGTTTCTTCCCAAACCTGCCTGATGTCAAAAGTACGTCAAAAGGAGTCTCTATGGCAGTGGTaGCCTCTCGCCCCTCGGACC +
Preference number: 4 (lower is better)
Translates to: HGFVSSQTCLMSKVRQKESLWQW*PLAPRT
Trigger: GGTCCGAGGGGCGAGAGGTCACCACTGCCATAGAGA...CTCCTTTTGACGTACTTTTGACATCAGGCAGGTTTGGGAAGAAACAAAGCCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp ATGTCAAAAGTACGTCAAAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGTGGCACAGTCCAGAGTaGAGTAAGGCTGTCAAGAGG +
Preference number: 4 (lower is better)
Translates to: MSKVRQKEPHSPRRAWSQWHSPE*SKAVKR
Trigger: CCTCTTGACAGCCTTACTTCACTCTGGACTGTGCCA...CTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTTTGACGTACTTTTGACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp GAGAATGCAACCTTCTTGCTTCAGTTTCAAGTCCCTCTGGGAGTCAGGCAGTCCTGGCACAGTCCAGAGTaGAGTAAGGCTGTCAAGAGG +
Preference number: 4 (lower is better)
Translates to: ENATFLLQFQVPLGVRQSWHSPE*SKAVKR
Trigger: CCTCTTGACAGCCTTACTTCACTCTGGACTGTGCCA...GGACTGCCTGACTCCCAGAGGGACTTGAAACTGAAGCAAGAAGGTTGCATTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp ACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCTGCCTACTGTCCTCCGTGAGGTaGCCTTCAAAGTCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: TEGFSSVNFGGRQECSCLLSSVR*PSKSEA
Trigger: AGCCTCTGACTTTGAAGGTCACCTCACGGAGGACAG...TAGGCAGGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp CAAGTGACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCCACTGCTGTCCTCCGTaGGGTGACCTTCAAAGTCAG +
Preference number: 4 (lower is better)
Translates to: QVTEGFSSVNFGGRQECSHCCPP*GDLQSQ
Trigger: CTGACTTTGAAGGTCACCTCACGGAGGACAGCAGTG...GGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGTCACTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp AGTGGAAGACTGGCATTTCTACTTAGTTCAGGTAGGTTAACTCCCTTGGTGGAGGTTAGTGGCCTCCACTaGGGACCCAGGCATGGACAG +
Preference number: 4 (lower is better)
Translates to: SGRLAFLLSSGRLTPLVEVSGLH*GPRHGQ
Trigger: CTGTCCATGCCTGGGTCCTCAGTGGAGGCCACTAAC...CTCCACCAAGGGAGTTAACCTACCTGAACTAAGTAGAAATGCCAGTCTTCCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp GTGACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCTGCTACTTGTGGGGATTCTaGCATGCTGTCATCGTGGGC +
Preference number: 4 (lower is better)
Translates to: VTEGFSSVNFGGRQECSCYLWGF*HAVIVG
Trigger: GCCCACGATGACAGCATGTCAGAATCCCCACAAGTA...GCAGGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp CCAGCAGAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGCACGGACTTCCTTCTaGTCTTCACAACTAAAGGAA +
Preference number: 4 (lower is better)
Translates to: PAEGRRGLDMFGPLFPVFARTSF*SSQLKE
Trigger: TTCCTTTAGTTGTGAAGATCAGAAGGAAGTCCGTGC...AAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTCTGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp GCCCAATGGGTTATACCCAGGAAACCCCTCCAGCAAGACCAGAAGGGTCGCCAAGATCACATTTGGAGATaGGAAACGAGGTGTTCTCGA +
Preference number: 4 (lower is better)
Translates to: AQWVIPRKPLQQDQKGRQDHIWR*ETRCSR
Trigger: TCGAGAACACCTCGTTTCTCATCTCCAAATGTGATC...TTGGCGACCCTTCTGGTCTTGCTGGAGGGGTTTCCTGGGTATAACCCATTGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp AATCACCACATCATTCCCAACTTGTCACTCATGCTTCAGATGACGAAAATGCCAGCTCCAGAGGCTCACTaGGCCCCTTCCCTGGCTCTC +
Preference number: 4 (lower is better)
Translates to: NHHIIPNLSLMLQMTKMPAPEAH*APSLAL
Trigger: GAGAGCCAGGGAAGGGGCTCAGTGAGCCTCTGGAGC...TGGCATTTTCGTCATCTGAAGCATGAGTGACAAGTTGGGAATGATGTGGTGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp CAAGTGACAGAGGGCTTTAGCAGTGTAAATTTTGGGGGAAGGCAAGAGTGCTCCCCAATACAGTCATCGTaGCAGAACGCACCGCAGCCT +
Preference number: 4 (lower is better)
Translates to: QVTEGFSSVNFGGRQECSPIQSS*QNAPQP
Trigger: AGGCTGCGGTGCGTTCTGTCACGATGACTGTATTGG...GGAGCACTCTTGCCTTCCCCCAAAATTTACACTGCTAAAGCCCTCTGTCACTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR TCA 90 bp CAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCCTCACGTCGCAATACACAGAGCTTTaGGGGTCCAATACAGTCATC +
Preference number: 4 (lower is better)
Translates to: QGIGQPGRSQVNHFTLTSQYTEL*GSNTVI
Trigger: GATGACTGTATTGGACCCTCAAAGCTCTGTGTATTG...CGACGTGAGGGTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp GGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACCAGGGAACTCACCCATaGATCCAGAAGCACTTAACA +
Preference number: 4 (lower is better)
Translates to: GDPTGHRATWQVTSQSFHQGTHP*IQKHLT
Trigger: TGTTAAGTGCTTCTGGATTCATGGGTGAGTTCCCTG...GTGAAATGATTGACTTGTGACCTGCCAGGTTGCCCGATGCCCTGTTGGGTCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR TCA 90 bp CTTCCTGGGGGCTGCCCAGGGAACTCACCCATGAATCCAGAAGCACTTAACACTCAGGGAACTCACCCATaGATCCAGAAGCACTTAACA +
Preference number: 4 (lower is better)
Translates to: LPGGCPGNSPMNPEALNTQGTHP*IQKHLT
Trigger: TGTTAAGTGCTTCTGGATTCATGGGTGAGTTCCCTG...AGTGTTAAGTGCTTCTGGATTCATGGGTGAGTTCCCTGGGCAGCCCCCAGGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR TCA 90 bp AGTGGAAGACTGGCATTTCTACTTAGTTCAGGTAGGTTAACTCCCTTGGTGGAGTGCTGTGACAGGTGGTaGCCCTGGAGCCAGATCTGG +
Preference number: 4 (lower is better)
Translates to: SGRLAFLLSSGRLTPLVECCDRW*PWSQIW
Trigger: CCAGATCTGGCTCCAGGGTCACCACCTGTCACAGCA...CTCCACCAAGGGAGTTAACCTACCTGAACTAAGTAGAAATGCCAGTCTTCCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp CTGGCATTTCTACTTAGTTCAGGTAGGTTAACTCCCTTGGTGGAGAATGCAACCTGCTGTGACAGGTGGTaGCCCTGGAGCCAGATCTGG +
Preference number: 4 (lower is better)
Translates to: LAFLLSSGRLTPLVENATCCDRW*PWSQIW
Trigger: CCAGATCTGGCTCCAGGGTCACCACCTGTCACAGCA...GGTTGCATTCTCCACCAAGGGAGTTAACCTACCTGAACTAAGTAGAAATGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
CDS-3UTR TCA 90 bp CACAACGAATATCAGAGAAGTGATGCCTATGGATGTAAAAGGCCAATGAACAAGGCTCTGCTGAGGGACTaGGACAGGACCGACGGCGGG +
Preference number: 4 (lower is better)
Translates to: HNEYQRSDAYGCKRPMNKALLRD*DRTDGG
Trigger: CCCGCCGTCGGTCCTGTCTCAGTCCCTCAGCAGAGC...CTTGTTCATTGGCCTTTTACATCCATAGGCATCACTTCTCTGATATTCGTTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542461.5
ENST00000646367.1
CDS-3UTR TCA 90 bp TGTAATCCATCCCAGTGCTTTGTGAAGCTGTGGTGGGAAGATCACTTGAGGCCATGCCATTGGCGTCCTTaGATGTGGGGTCGCTTTTCC +
Preference number: 4 (lower is better)
Translates to: CNPSQCFVKLWWEDHLRPCHWRP*MWGRFS
Trigger: GGAAAAGCGACCCCACATTCAAGGACGCCAATGGCA...TGGCCTCAAGTGATCTTCCCACCACAGCTTCACAAAGCACTGGGATGGATTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000645035.1
ENST00000649901.1
CDS-3UTR TCA 90 bp ACCTGTAATCCATCCCAGTGCTTTGTGAAGCTGTGGTGGGAAGATCACTTGAGGTGCCATTGGCGTCCTTaGATGTGGGGTCGCTTTTCC +
Preference number: 4 (lower is better)
Translates to: TCNPSQCFVKLWWEDHLRCHWRP*MWGRFS
Trigger: GGAAAAGCGACCCCACATTCAAGGACGCCAATGGCA...CCTCAAGTGATCTTCCCACCACAGCTTCACAAAGCACTGGGATGGATTACAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000645035.1
ENST00000649901.1
CDS-3UTR GCA 90 bp GTCAAAAGTACGTCAAAAGGAGCCTCACAGTCCCAGGAGAGCATGGTCCCAGGTAGGAAGAGGAGCTGCTaGTGGAAGTGTGATGGTAAG +
Preference number: 4 (lower is better)
Translates to: VKSTSKGASQSQESMVPGRKRSC*WKCDGK
Trigger: CTTACCATCACACTTCCAGCAGCAGCTCCTCTTCCT...ACCTGGGACCATGCTCTCCTGGGACTGTGAGGCTCCTTTTGACGTACTTTTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR GCA 90 bp GAGGGAAGAAGAGGACTGGACATGTTTGGGCCCCTGTTCCCGGTCTTTGGTAAAGAGCGTTTCTTAAAATaGCCATCTCGCTGTCGGGTG +
Preference number: 4 (lower is better)
Translates to: EGRRGLDMFGPLFPVFGKERFLK*PSRCRV
Trigger: CACCCGACAGCGAGATGGGCATTTTAAGAAACGCTC...TTTACCAAAGACCGGGAACAGGGGCCCAAACATGTCCAGTCCTCTTCTTCCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR GCA 90 bp CCGGTCTTTGGTAAACAGACGCTTAAGTTGACAACTTGGACTTGGCCAATACTGGGGACTGCTCAGCCCTaGTGGGTCAGTCTTAGCCTC +
Preference number: 4 (lower is better)
Translates to: PVFGKQTLKLTTWTWPILGTAQP*WVSLSL
Trigger: GAGGCTAAGACTGACCCAGCAGGGCTGAGCAGTCCC...CAGTATTGGCCAAGTCCAAGTTGTCAACTTAAGCGTCTGTTTACCAAAGACCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000646985.1
ENST00000651418.1
CDS-3UTR GCA 90 bp AGTTCAGGTAGGTTAACTCCCTTGGTGGAGAATGCAACCTTCTTGCTTCAGTTTCTGGCAGATGGGGACTaGTCAGCCCTGCTGGGTCAG +
Preference number: 4 (lower is better)
Translates to: SSGRLTPLVENATFLLQFLADGD*SALLGQ
Trigger: CTGACCCAGCAGGGCTGAGCAGTCCCCATCTGCCAG...AAACTGAAGCAAGAAGGTTGCATTCTCCACCAAGGGAGTTAACCTACCTGAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306058.9
ENST00000375687.10
ENST00000613218.4
ENST00000620121.4
ENST00000646985.1
CDS-3UTR GCA 90 bp GGTGACCCAACAGGGCATCGGGCAACCTGGCAGGTCACAAGTCAATCATTTCACAATTCTGTCTGGAGATaGAGAGGCACGTGCCAAGTT +
Preference number: 4 (lower is better)
Translates to: GDPTGHRATWQVTSQSFHNSVWR*RGTCQV
Trigger: