RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ASTN2 (Homo sapiens)

Ensembl gene IDs: ENSG00000148219

Ensembl transcript IDs: ENST00000288520.9, ENST00000313400.9, ENST00000341734.8, ENST00000358637.4, ENST00000361209.6, ENST00000361477.8, ENST00000373986.7, ENST00000417725.1

Found 971 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GAGACAATAGGAATTTTTAATGCATGGACAGGCCTGCAGGGACTCTaGGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCCCACAAACT +
Preference number: 1 (lower is better)
Translates to: ETIGIFNAWTGLQGL*ADPQVAGRGRVPQT
Trigger: AGTTTGTGGGACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCCCAGAGTCCCTGCAGGCCTGTCCATGCATTAAAAATTCCTATTGTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
3UTR TCA 90 bp CTCTCTGAAAACTTGGGACCCAGGCCCAGCAAACTGATAGCTCTCTaGAGGCCCATGTATACCCAGGAAGTGGTATACATGAGAGGCATT +
Preference number: 1 (lower is better)
Translates to: LSENLGPRPSKLIAL*RPMYTQEVVYMRGI
Trigger: AATGCCTCTCATGTATACCACTTCCTGGGTATACATGGGCCTTCAGAGAGCTATCAGTTTGCTGGGCCTGGGTCCCAAGTTTTCAGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313400.9
3UTR GCA 90 bp TGGATGCTTCAAGGCAGCATCAAGCTTCTTGCCCAAAGCTTCCAATaGCTTGCCAAGCTCCCAGCCTCACCTTTTAACACTTCCTATTTT +
Preference number: 1 (lower is better)
Translates to: WMLQGSIKLLAQSFQ*LAKLPASPFNTSYF
Trigger: AAAATAGGAAGTGTTAAAAGGTGAGGCTGGGAGCTTGGCAAGGCATTGGAAGCTTTGGGCAAGAAGCTTGATGCTGCCTTGAAGCATCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313400.9
3UTR TCA 90 bp GATCACCACACCAGCACATTGAGTGCTGTAATTTTCTGCAACTGTTaGGCTAAATTGTTCCTCGGGTTGGGTCAAGACAATGGAAAGCAA +
Preference number: 1 (lower is better)
Translates to: DHHTSTLSAVIFCNC*AKLFLGLGQDNGKQ
Trigger: TTGCTTTCCATTGTCTTGACCCAACCCGAGGAACAATTTAGCTCAACAGTTGCAGAAAATTACAGCACTCAATGTGCTGGTGTGGTGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313400.9
3UTR GCA 90 bp AAACCCCACAGTGCTACACTCTCTTCTCTTAACAGGTGTCATCTTTaGATTATGATATACCTGACCTACATCCCATCTGCTCAAGCTAGG +
Preference number: 1 (lower is better)
Translates to: KPHSATLSSLNRCHL*IMIYLTYIPSAQAR
Trigger: CCTAGCTTGAGCAGATGGGATGTAGGTCAGGTATATCATAATGCAAAGATGACACCTGTTAAGAGAAGAGAGTGTAGCACTGTGGGGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313400.9
3UTR CCA 90 bp TATAACATCTCTTCATACTCATTACCCTCCCAGGGAAGGGTACACTaGAAGCAGTGCAATTACCATTTAAAAGGATATTTCAATGATACC +
Preference number: 1 (lower is better)
Translates to: YNISSYSLPSQGRVH*KQCNYHLKGYFNDT
Trigger: GGTATCATTGAAATATCCTTTTAAATGGTAATTGCACTGCTTCCAGTGTACCCTTCCCTGGGAGGGTAATGAGTATGAAGAGATGTTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313400.9
3UTR-3UTR GCA 90 bp ACAGGCCTGCAGGGACTCTGGGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCCGTTTGCTTTGGCCTTaGTGGCAAGCTTCATCTGCT +
Preference number: 2 (lower is better)
Translates to: TGLQGLWADPQVAGRGRVRLLWP*WQASSA
Trigger: AGCAGATGAAGCTTGCCAGCAAGGCCAAAGCAAACG...GACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCCCAGAGTCCCTGCAGGCCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
3UTR-3UTR GCA 90 bp ACAGGCCTGCAGGGACTCTGGGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCACAGGAGAAACCGTTTaGTTTGGCCTTGCTGGCAAG +
Preference number: 2 (lower is better)
Translates to: TGLQGLWADPQVAGRGRVTGETV*FGLAGK
Trigger: CTTGCCAGCAAGGCCAAAGCAAACGGTTTCTCCTGT...GACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCCCAGAGTCCCTGCAGGCCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
3UTR-3UTR CCA 90 bp GGCCTGCAGGGACTCTGGGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCCCAAGAAACCGTTTGCTTTaGCCTTGCTGGCAAGCTTCA +
Preference number: 2 (lower is better)
Translates to: GLQGLWADPQVAGRGRVPRNRLL*PCWQAS
Trigger: TGAAGCTTGCCAGCAAGGCCAAAGCAAACGGTTTCT...TGGGACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCCCAGAGTCCCTGCAGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
3UTR-3UTR GCA 90 bp CCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTGGCACATGGAGAGTCTCTGTaGTCACGGAGGGCAATACCC +
Preference number: 2 (lower is better)
Translates to: PSIGLLQGSMAGRKQSVAHGESL*SRRAIP
Trigger: GGGTATTGCCCTCCGTGAGCACAGAGACTCTCCATG...TGCCACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
3UTR-3UTR GCA 90 bp CAATGGCACCCCTCTCTTTGGGGCCTTCTCCAATCCATCCTTCACCCTGTAGTGATGCATGGACAGGCCTaGAGGGACTCTGGGCAGACC +
Preference number: 2 (lower is better)
Translates to: QWHPSLWGLLQSILHPVVMHGQA*RDSGQT
Trigger: GGTCTGCCCAGAGTCCCTGCAGGCCTGTCCATGCAT...CACTACAGGGTGAAGGATGGATTGGAGAAGGCCCCAAAGAGAGGGGTGCCATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313400.9
3UTR-3UTR CCA 90 bp TCAGGTCAAAACTGTCCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGACTGCTCCCCCTCCCATaGAGAGTCTCTGTGCTCACG +
Preference number: 2 (lower is better)
Translates to: SGQNCPSIGLLQGSMAGRLLPLP*RVSVLT
Trigger: CGTGAGCACAGAGACTCTCCATGGGAGGGGGAGCAG...TCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGGACAGTTTTGACCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
3UTR-3UTR CCA 90 bp ACAGGCCTGCAGGGACTCTGGGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCAGAAACCGTTTGCTTTaGCCTTGCTGGCAAGCTTCA +
Preference number: 2 (lower is better)
Translates to: TGLQGLWADPQVAGRGRVRNRLL*PCWQAS
Trigger: TGAAGCTTGCCAGCAAGGCCAAAGCAAACGGTTTCT...GACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCCCAGAGTCCCTGCAGGCCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
3UTR-3UTR CCA 90 bp CTCAGAGCTTCCTTCCTGGTGCTGAAGAGGTCAAAACTGTCTCCTCTAGGGGTCCTGCTCCCCCTCCCATaGAGAGTCTCTGTGCTCACG +
Preference number: 2 (lower is better)
Translates to: LRASFLVLKRSKLSPLGVLLPLP*RVSVLT
Trigger: CGTGAGCACAGAGACTCTCCATGGGAGGGGGAGCAG...GACCCCTAGAGGAGACAGTTTTGACCTCTTCAGCACCAGGAAGGAAGCTCTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
3UTR-3UTR CCA 90 bp CAGAGCTTCCTTCCTGGTGCTGAAGAGGTCAAAACTGTCTCCTCTAGGGGTCAGCTGCTCCCCCTCCCATaGAGAGTCTCTGTGCTCACG +
Preference number: 2 (lower is better)
Translates to: QSFLPGAEEVKTVSSRGQLLPLP*RVSVLT
Trigger: CGTGAGCACAGAGACTCTCCATGGGAGGGGGAGCAG...CTGACCCCTAGAGGAGACAGTTTTGACCTCTTCAGCACCAGGAAGGAAGCTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
3UTR-3UTR CCA 90 bp CTGCAGGGACTCTGGGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCCCACAAAGAAACCGTTTGCTTTaGCCTTGCTGGCAAGCTTCA +
Preference number: 2 (lower is better)
Translates to: LQGLWADPQVAGRGRVPQRNRLL*PCWQAS
Trigger: TGAAGCTTGCCAGCAAGGCCAAAGCAAACGGTTTCT...TTGTGGGACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCCCAGAGTCCCTGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
3UTR-3UTR GCA 90 bp CAATGGCACCCCTCTCTTTGGGGCCTTCTCCAATCCATCCTTCACCCTGTAGTGCATGGAGAGTCTCTGTaGTCACGGAGGGCAATACCC +
Preference number: 2 (lower is better)
Translates to: QWHPSLWGLLQSILHPVVHGESL*SRRAIP
Trigger: GGGTATTGCCCTCCGTGAGCACAGAGACTCTCCATG...CACTACAGGGTGAAGGATGGATTGGAGAAGGCCCCAAAGAGAGGGGTGCCATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313400.9
3UTR-3UTR CCA 90 bp CCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTGGCATTGCTTTGGCCTTGCTaGCAAGCTTCATCTGCTAGG +
Preference number: 2 (lower is better)
Translates to: PSIGLLQGSMAGRKQSVALLWPC*QASSAR
Trigger: CCTAGCAGATGAAGCTTGCCAGCAAGGCCAAAGCAA...TGCCACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
3UTR-3UTR CCA 90 bp CAGGGACTCTGGGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCCCACAAACTAGAAACCGTTTGCTTTaGCCTTGCTGGCAAGCTTCA +
Preference number: 2 (lower is better)
Translates to: QGLWADPQVAGRGRVPQTRNRLL*PCWQAS
Trigger: TGAAGCTTGCCAGCAAGGCCAAAGCAAACGGTTTCT...AGTTTGTGGGACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCCCAGAGTCCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
3UTR-3UTR CCA 90 bp CCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTGGCAAGAGCAAAGGCCGCTTaGTCTCCACCTGAAAACTTC +
Preference number: 2 (lower is better)
Translates to: PSIGLLQGSMAGRKQSVARAKAA*SPPENF
Trigger: GAAGTTTTCAGGTGGAGACCAAGCGGCCTTTGCTCT...TGCCACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
3UTR-3UTR CCA 90 bp CTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTGGCAGGAGAGCAAAGGCCGCTTaGTCTCCACCTGAAAACTTC +
Preference number: 2 (lower is better)
Translates to: LHRSPPGVHGRKKAECGRRAKAA*SPPENF
Trigger: GAAGTTTTCAGGTGGAGACCAAGCGGCCTTTGCTCT...CCTGCCACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
3UTR-3UTR GCA 90 bp AGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTGGCAGGAAGAAGCCACCTGAAAACTTCTaGCTCGGGATTGACAGCCAT +
Preference number: 2 (lower is better)
Translates to: RSPPGVHGRKKAECGRKKPPENF*LGIDSH
Trigger: ATGGCTGTCAATCCCGAGGCAGAAGTTTTCAGGTGG...CTTCTTCCTGCCACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
3UTR-3UTR CCA 90 bp AAGAGAGAGAAGTCCTTAAAGACCCATGCTTCCTCACTGCAACCATCCTCAGAGCTGCTCCCCCTCCCATaGAGAGTCTCTGTGCTCACG +
Preference number: 2 (lower is better)
Translates to: KREKSLKTHASSLQPSSELLPLP*RVSVLT
Trigger: CGTGAGCACAGAGACTCTCCATGGGAGGGGGAGCAG...CTCTGAGGATGGTTGCAGTGAGGAAGCATGGGTCTTTAAGGACTTCTCTCTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
3UTR-3UTR CCA 90 bp TGTCACCTAGGCTGGAGTCCAGTGGCTCCATGTCAGTTCACTGCAAACTCTGCCAGAGCAAAGGCCGCTTaGTCTCCACCTGAAAACTTC +
Preference number: 2 (lower is better)
Translates to: CHLGWSPVAPCQFTANSARAKAA*SPPENF
Trigger: GAAGTTTTCAGGTGGAGACCAAGCGGCCTTTGCTCT...GGCAGAGTTTGCAGTGAACTGACATGGAGCCACTGGACTCCAGCCTAGGTGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313400.9
3UTR-3UTR GCA 90 bp AGAGAAGTCCTTAAAGACCCATGCTTCCTCACTGCAACCATCCTCAGAGCTTCCCATGGAGAGTCTCTGTaGTCACGGAGGGCAATACCC +
Preference number: 2 (lower is better)
Translates to: REVLKDPCFLTATILRASHGESL*SRRAIP
Trigger: GGGTATTGCCCTCCGTGAGCACAGAGACTCTCCATG...GGAAGCTCTGAGGATGGTTGCAGTGAGGAAGCATGGGTCTTTAAGGACTTCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
3UTR-3UTR GCA 90 bp CCTCAGAGCTTCCTTCCTGGTGCTGAAGAGGTCAAAACTGTCTCCTCTAGGGGTACAGGAGAAACCGTTTaGTTTGGCCTTGCTGGCAAG +
Preference number: 2 (lower is better)
Translates to: PQSFLPGAEEVKTVSSRGTGETV*FGLAGK
Trigger: CTTGCCAGCAAGGCCAAAGCAAACGGTTTCTCCTGT...ACCCCTAGAGGAGACAGTTTTGACCTCTTCAGCACCAGGAAGGAAGCTCTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
3UTR-3UTR TCA 90 bp CCTCAGAGCTTCCTTCCTGGTGCTGAAGAGGTCAAAACTGTCTCCTCTAGGGGTCTTCTGCCTCGGGATTaGCAGCCATCCATAAGAAAA +
Preference number: 2 (lower is better)
Translates to: PQSFLPGAEEVKTVSSRGLLPRD*QPSIRK
Trigger: TTTTCTTATGGATGGCTGTCAATCCCGAGGCAGAAG...ACCCCTAGAGGAGACAGTTTTGACCTCTTCAGCACCAGGAAGGAAGCTCTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
3UTR-3UTR GCA 90 bp AGAGAAGTCCTTAAAGACCCATGCTTCCTCACTGCAACCATCCTCAGAGCTTCCCCACCTGAAAACTTCTaGCTCGGGATTGACAGCCAT +
Preference number: 2 (lower is better)
Translates to: REVLKDPCFLTATILRASPPENF*LGIDSH
Trigger: ATGGCTGTCAATCCCGAGGCAGAAGTTTTCAGGTGG...GGAAGCTCTGAGGATGGTTGCAGTGAGGAAGCATGGGTCTTTAAGGACTTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
3UTR-3UTR TCA 90 bp AGAGAAGTCCTTAAAGACCCATGCTTCCTCACTGCAACCATCCTCAGAGCTTCCCTTCTGCCTCGGGATTaGCAGCCATCCATAAGAAAA +
Preference number: 2 (lower is better)
Translates to: REVLKDPCFLTATILRASLLPRD*QPSIRK
Trigger: TTTTCTTATGGATGGCTGTCAATCCCGAGGCAGAAG...GGAAGCTCTGAGGATGGTTGCAGTGAGGAAGCATGGGTCTTTAAGGACTTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
3UTR-3UTR GCA 90 bp CCTTTGGGTTTAGGTATCACTTTTTCAAGGAAGCATTTCAGGAGCCCTCCAGTGCGTTTGCTTTGGCCTTaGTGGCAAGCTTCATCTGCT +
Preference number: 2 (lower is better)
Translates to: PLGLGITFSRKHFRSPPVRLLWP*WQASSA
Trigger: AGCAGATGAAGCTTGCCAGCAAGGCCAAAGCAAACG...CACTGGAGGGCTCCTGAAATGCTTCCTTGAAAAAGTGATACCTAAACCCAAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000313400.9
3UTR-3UTR CCA 90 bp TTGCCCAAAGCTTCCAATGCCTTGCCAAGCTCCCAGCCTCACCTTTTAACACTTCATATGCTCTGTGACTaGCACAGGGTAGATACTCAA +
Preference number: 2 (lower is better)
Translates to: LPKASNALPSSQPHLLTLHMLCD*HRVDTQ
Trigger: TTGAGTATCTACCCTGTGCCAGTCACAGAGCATATG...AAGTGTTAAAAGGTGAGGCTGGGAGCTTGGCAAGGCATTGGAAGCTTTGGGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313400.9
3UTR-3UTR GCA 90 bp TCCCAACCAGATTTTCCTGGATGTCTGCCCAAGACTCACAGTATTATGCATATTAGGCATGAGCCACTGTaGCTGGCAAGCAAATCCCAT +
Preference number: 2 (lower is better)
Translates to: SQPDFPGCLPKTHSIMHIRHEPL*LASKSH
Trigger: ATGGGATTTGCTTGCCAGGCACAGTGGCTCATGCCT...AATATGCATAATACTGTGAGTCTTGGGCAGACATCCAGGAAAATCTGGTTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313400.9
3UTR CAA 90 bp AATGCCTTGCCAAGCTCCCAGCCTCACCTTTTAACACTTCCTATTTaGATCCCTACTCTTAAGGAAAGTTTTCAGTCCTTGAAAGAGGTG +
Preference number: 2 (lower is better)
Translates to: NALPSSQPHLLTLPI*IPTLKESFQSLKEV
Trigger: CACCTCTTTCAAGGACTGAAAACTTTCCTTAAGAGTAGGGATCAAAATAGGAAGTGTTAAAAGGTGAGGCTGGGAGCTTGGCAAGGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313400.9
3UTR-3UTR GCA 90 bp TGCGCTCAATATGTAGGTTATCAGGAAGGGGATTGTCAATCTCATCAACATTTGGTCCTTAAAGACCCATaGTTCCTCACTGCAACCATC +
Preference number: 2 (lower is better)
Translates to: CAQYVGYQEGDCQSHQHLVLKDP*FLTATI
Trigger: GATGGTTGCAGTGAGGAAGCATGGGTCTTTAAGGAC...CAAATGTTGATGAGATTGACAATCCCCTTCCTGATAACCTACATATTGAGCGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313400.9
3UTR-3UTR CCA 90 bp AGAAAATTCAACATCTGTTTCCAATGGAAACAAAACAGAGCCTTTGCAGCAGACAAATGGATAAATTCCTaGACACATACAGCCTCCTCC +
Preference number: 2 (lower is better)
Translates to: RKFNICFQWKQNRAFAADKWINS*THTASS
Trigger: GGAGGAGGCTGTATGTGTCCAGGAATTTATCCATTT...GTCTGCTGCAAAGGCTCTGTTTTGTTTCCATTGGAAACAGATGTTGAATTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358637.4
3UTR-3UTR CCA 90 bp ATGGAAACAAAACAGAGCCTTTGCAGCAGACTAGAAATAGAAGATACCTTCTTCAACCGCTCAACTACATaGAAACTGAACAACTTGCTC +
Preference number: 2 (lower is better)
Translates to: METKQSLCSRLEIEDTFFNRSTT*KLNNLL
Trigger: GAGCAAGTTGTTCAGTTTCCATGTAGTTGAGCGGTT...GAAGAAGGTATCTTCTATTTCTAGTCTGCTGCAAAGGCTCTGTTTTGTTTCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358637.4
3UTR-3UTR GCA 90 bp ATGGAAACAAAACAGAGCCTTTGCAGCAGACTAGAAATAGAAGATACCTTCTTCTCTCTCAGAACACAGTaGAATCAAACTAGAACTCAG +
Preference number: 2 (lower is better)
Translates to: METKQSLCSRLEIEDTFFSLRTQ*NQTRTQ
Trigger: CTGAGTTCTAGTTTGATTGCACTGTGTTCTGAGAGA...GAAGAAGGTATCTTCTATTTCTAGTCTGCTGCAAAGGCTCTGTTTTGTTTCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358637.4
3UTR-3UTR CCA 90 bp AGAAAATTCAACATCTGTTTCCAATGGAAACAAAACAGAGCCTTTGCAGCAGACAAATTGATCACACAGTaGGAAGTAAAGCACTCCTCA +
Preference number: 2 (lower is better)
Translates to: RKFNICFQWKQNRAFAADKLITQ*EVKHSS
Trigger: TGAGGAGTGCTTTACTTCCCACTGTGTGATCAATTT...GTCTGCTGCAAAGGCTCTGTTTTGTTTCCATTGGAAACAGATGTTGAATTTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358637.4
3UTR CAA 90 bp ACAGAAAATTCAACATCTGTTTCCAATGGAAACAAAACAGAGCCTTaGCAGCAGACTAGAAATAGAAGATACCTTCTTCGAGCTAACTAT +
Preference number: 2 (lower is better)
Translates to: TENSTSVSNGNKTEP*QQTRNRRYLLRANY
Trigger: ATAGTTAGCTCGAAGAAGGTATCTTCTATTTCTAGTCTGCTGCAAAGGCTCTGTTTTGTTTCCATTGGAAACAGATGTTGAATTTTCTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358637.4
3UTR-3UTR GCA 90 bp AGAAAATTCAACATCTGTTTCCAATGGAAACAAAACAGAGCCTTTGCAGCAGACTATCCTAAATATATATaGACCCAATATAGGAGCACC +
Preference number: 2 (lower is better)
Translates to: RKFNICFQWKQNRAFAADYPKYI*TQYRST
Trigger: GGTGCTCCTATATTGGGTGCATATATATTTAGGATA...GTCTGCTGCAAAGGCTCTGTTTTGTTTCCATTGGAAACAGATGTTGAATTTTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358637.4
3UTR-3UTR CAA 90 bp GGCCTGCAGGGACTCTGGGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCCCAGAGAAACCGTTTGCTTaGGCCTTGCTGGCAAGCTTC +
Preference number: 3 (lower is better)
Translates to: GLQGLWADPQVAGRGRVPEKPFA*ALLASF
Trigger: GAAGCTTGCCAGCAAGGCCAAAGCAAACGGTTTCTC...TGGGACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCCCAGAGTCCCTGCAGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
3UTR CCA 72 bp GCCCCAGGATCCAGGAGAATACTGCTCCCCCTCCCATaGAGAGTCTCTGTGCTCACGGAGGGCAATACCCTC +
Preference number: 3 (lower is better)
Translates to: APGSRRILLPLP*RVSVLTEGNTL
Trigger: GAGGGTATTGCCCTCCGTGAGCACAGAGACTCTCCATGGGAGGGGGAGCAGTATTCTCCTGGATCCTGGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
3UTR-3UTR CAA 90 bp CCTCAGAGCTTCCTTCCTGGTGCTGAAGAGGTCAAAACTGTCTCCTCTAGGGGTCCGTTTGCTTTGGCCTaGCTGGCAAGCTTCATCTGC +
Preference number: 3 (lower is better)
Translates to: PQSFLPGAEEVKTVSSRGPFALA*LASFIC
Trigger: GCAGATGAAGCTTGCCAGCAAGGCCAAAGCAAACGG...ACCCCTAGAGGAGACAGTTTTGACCTCTTCAGCACCAGGAAGGAAGCTCTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
3UTR GCA 72 bp TCCACTATCCACAGGAGAAACCGTTTGCTTTGGCCTTaGTGGCAAGCTTCATCTGCTAGGCCCATCCTCAGC +
Preference number: 3 (lower is better)
Translates to: STIHRRNRLLWP*WQASSARPILS
Trigger: GCTGAGGATGGGCCTAGCAGATGAAGCTTGCCAGCAAGGCCAAAGCAAACGGTTTCTCCTGTGGATAGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
3UTR-3UTR CAA 90 bp GCTTCAAGGCAGCATCAAGCTTCTTGCCCAAAGCTTCCAATGCCTTGCCAAGCTCACAGGAGAAACCGTTaGCTTTGGCCTTGCTGGCAA +
Preference number: 3 (lower is better)
Translates to: ASRQHQASCPKLPMPCQAHRRNR*LWPCWQ
Trigger: TTGCCAGCAAGGCCAAAGCAAACGGTTTCTCCTGTG...AGCTTGGCAAGGCATTGGAAGCTTTGGGCAAGAAGCTTGATGCTGCCTTGAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313400.9
3UTR-3UTR CAA 90 bp AAGAGAGAGAAGTCCTTAAAGACCCATGCTTCCTCACTGCAACCATCCTCAGAGCCGTTTGCTTTGGCCTaGCTGGCAAGCTTCATCTGC +
Preference number: 3 (lower is better)
Translates to: KREKSLKTHASSLQPSSEPFALA*LASFIC
Trigger: GCAGATGAAGCTTGCCAGCAAGGCCAAAGCAAACGG...CTCTGAGGATGGTTGCAGTGAGGAAGCATGGGTCTTTAAGGACTTCTCTCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
3UTR-3UTR CAA 90 bp TTGCCCAAAGCTTCCAATGCCTTGCCAAGCTCCCAGCCTCACCTTTTAACACTTGAGAAACCGTTTGCTTaGGCCTTGCTGGCAAGCTTC +
Preference number: 3 (lower is better)
Translates to: LPKASNALPSSQPHLLTLEKPFA*ALLASF
Trigger: GAAGCTTGCCAGCAAGGCCAAAGCAAACGGTTTCTC...AAGTGTTAAAAGGTGAGGCTGGGAGCTTGGCAAGGCATTGGAAGCTTTGGGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313400.9
3UTR-3UTR CAA 90 bp CCTCAGAGCTTCCTTCCTGGTGCTGAAGAGGTCAAAACTGTCTCCTCTAGGGGTACTTCTGCCTCGGGATaGACAGCCATCCATAAGAAA +
Preference number: 3 (lower is better)
Translates to: PQSFLPGAEEVKTVSSRGTSASG*TAIHKK
Trigger: TTTCTTATGGATGGCTGTCAATCCCGAGGCAGAAGT...ACCCCTAGAGGAGACAGTTTTGACCTCTTCAGCACCAGGAAGGAAGCTCTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
3UTR GCA 72 bp CAAGGCAGCATCAAGCTTCTTGCCCAAAGCTTCCAATaGCTTGCCAAGCTCCCAGCCTCACCTTTTAACACT +
Preference number: 3 (lower is better)
Translates to: QGSIKLLAQSFQ*LAKLPASPFNT
Trigger: AGTGTTAAAAGGTGAGGCTGGGAGCTTGGCAAGGCATTGGAAGCTTTGGGCAAGAAGCTTGATGCTGCCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313400.9
3UTR TCA 72 bp AAGCTGGGAAACAACCCCTTGAGGTGGGACCAGCATTaGCTCCACTTTGTTGATGAGAAACCTGATGTCAAG +
Preference number: 3 (lower is better)
Translates to: KLGNNPLRWDQH*LHFVDEKPDVK
Trigger: CTTGACATCAGGTTTCTCATCAACAAAGTGGAGTCAATGCTGGTCCCACCTCAAGGGGTTGTTTCCCAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313400.9
3UTR-3UTR CAA 90 bp AAGAGAGAGAAGTCCTTAAAGACCCATGCTTCCTCACTGCAACCATCCTCAGAGACTTCTGCCTCGGGATaGACAGCCATCCATAAGAAA +
Preference number: 3 (lower is better)
Translates to: KREKSLKTHASSLQPSSETSASG*TAIHKK
Trigger: TTTCTTATGGATGGCTGTCAATCCCGAGGCAGAAGT...CTCTGAGGATGGTTGCAGTGAGGAAGCATGGGTCTTTAAGGACTTCTCTCTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
3UTR TCA 72 bp ACCAGCACATTGAGTGCTGTAATTTTCTGCAACTGTTaGGCTAAATTGTTCCTCGGGTTGGGTCAAGACAAT +
Preference number: 3 (lower is better)
Translates to: TSTLSAVIFCNC*AKLFLGLGQDN
Trigger: ATTGTCTTGACCCAACCCGAGGAACAATTTAGCTCAACAGTTGCAGAAAATTACAGCACTCAATGTGCTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313400.9
3UTR-3UTR CAA 90 bp TCCCAACCAGATTTTCCTGGATGTCTGCCCAAGACTCACAGTATTATGCATATTGAAAGTTTTCAGTCCTaGAAAGAGGTGTACTGTCTC +
Preference number: 3 (lower is better)
Translates to: SQPDFPGCLPKTHSIMHIESFQS*KEVYCL
Trigger: GAGACAGTACACCTCTTTCAAGGACTGAAAACTTTC...AATATGCATAATACTGTGAGTCTTGGGCAGACATCCAGGAAAATCTGGTTGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313400.9
3UTR GCA 72 bp AGTGCTACACTCTCTTCTCTTAACAGGTGTCATCTTTaGATTATGATATACCTGACCTACATCCCATCTGCT +
Preference number: 3 (lower is better)
Translates to: SATLSSLNRCHL*IMIYLTYIPSA
Trigger: AGCAGATGGGATGTAGGTCAGGTATATCATAATGCAAAGATGACACCTGTTAAGAGAAGAGAGTGTAGCACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313400.9
3UTR-3UTR CAA 90 bp ATGGAAACAAAACAGAGCCTTTGCAGCAGACTAGAAATAGAAGATACCTTCTTCAAGGATATCCAGGAATaGAACTCAGCTCTGCACCAA +
Preference number: 3 (lower is better)
Translates to: METKQSLCSRLEIEDTFFKDIQE*NSALHQ
Trigger: TTGGTGCAGAGCTGAGTTCAATTCCTGGATATCCTT...GAAGAAGGTATCTTCTATTTCTAGTCTGCTGCAAAGGCTCTGTTTTGTTTCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358637.4
3UTR-3UTR CAA 90 bp TCCCAACCAGATTTTCCTGGATGTCTGCCCAAGACTCACAGTATTATGCATATTTTATCAGGAAGGGGATaGTCAATCTCATCAACATTT +
Preference number: 3 (lower is better)
Translates to: SQPDFPGCLPKTHSIMHILSGRG*SISSTF
Trigger: AAATGTTGATGAGATTGACAATCCCCTTCCTGATAA...AATATGCATAATACTGTGAGTCTTGGGCAGACATCCAGGAAAATCTGGTTGGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000313400.9
3UTR GCA 72 bp AGATACCTTCTTCGAGCTAACTATCCTAAATATATATaGACCCAATATAGGAGCACCCAGATTCATAAAGCA +
Preference number: 3 (lower is better)
Translates to: RYLLRANYPKYI*TQYRSTQIHKA
Trigger: TGCTTTATGAATCTGGGTGCTCCTATATTGGGTGCATATATATTTAGGATAGTTAGCTCGAAGAAGGTATCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358637.4
CDS-3UTR CCA 90 bp GGCCTGCAGGGACTCTGGGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCCCAGGAGAGTGGGGGCGGTaGCTTGGGCCAGCTGCCCGG +
Preference number: 4 (lower is better)
Translates to: GLQGLWADPQVAGRGRVPGEWGR*LGPAAR
Trigger: CCGGGCAGCTGGCCCAAGCCACCGCCCCCACTCTCC...TGGGACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCCCAGAGTCCCTGCAGGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313400.9
ENST00000361209.6
CDS-3UTR CCA 90 bp GGCCTGCAGGGACTCTGGGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCCCAAGGGCTCCTGGAGAGTaGGGGCGGTGGCTTGGGCCA +
Preference number: 4 (lower is better)
Translates to: GLQGLWADPQVAGRGRVPRAPGE*GRWLGP
Trigger: TGGCCCAAGCCACCGCCCCCACTCTCCAGGAGCCCT...TGGGACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCCCAGAGTCCCTGCAGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313400.9
ENST00000361209.6
CDS-3UTR GCA 90 bp ACAGGCCTGCAGGGACTCTGGGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCAGGAAAGCTCACCCCTaGAGGGCCGCCTTGCCCCGC +
Preference number: 4 (lower is better)
Translates to: TGLQGLWADPQVAGRGRVRKAHP*RAALPR
Trigger: GCGGGGCAAGGCGGCCCTGCAGGGGTGAGCTTTCCT...GACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCCCAGAGTCCCTGCAGGCCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288520.9
ENST00000341734.8
CDS-3UTR CCA 90 bp ACAGGCCTGCAGGGACTCTGGGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCGGAGGGCTCCACTGTTaGGGACAGCCGCAGCACCGG +
Preference number: 4 (lower is better)
Translates to: TGLQGLWADPQVAGRGRVGGLHC*GQPQHR
Trigger: CCGGTGCTGCGGCTGTCCCCAACAGTGGAGCCCTCC...GACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCCCAGAGTCCCTGCAGGCCTGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR TCA 90 bp GGCCTGCAGGGACTCTGGGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCCCACGTACAGCGCCACGGTaGACACCAGCAGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: GLQGLWADPQVAGRGRVPRTAPR*TPAAAA
Trigger: TGCTGCTGCTGCTGGTGTTCACCGTGGCGCTGTACG...TGGGACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCCCAGAGTCCCTGCAGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313400.9
ENST00000361209.6
CDS-3UTR TCA 90 bp GGCCTGCAGGGACTCTGGGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCCCATTCATCGTCTGCCTCTaGGCCCGACGTCCCCTTGGC +
Preference number: 4 (lower is better)
Translates to: GLQGLWADPQVAGRGRVPFIVCL*ARRPLG
Trigger: GCCAAGGGGACGTCGGGCTCAGAGGCAGACGATGAA...TGGGACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCCCAGAGTCCCTGCAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp CTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTGGCAGGGCGACTCGGCGGCGGTaGCGGCAGAGCCAGGAGAGC +
Preference number: 4 (lower is better)
Translates to: LHRSPPGVHGRKKAECGRATRRR*RQSQES
Trigger: GCTCTCCTGGCTCTGCCGGCACCGCCGCCGAGTCGC...CCTGCCACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313400.9
ENST00000361209.6
CDS-3UTR CCA 90 bp GGCCTGCAGGGACTCTGGGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCCCACCAGCAGCACTGGTGTaGGGCTCAGCTGCTCCTTGC +
Preference number: 4 (lower is better)
Translates to: GLQGLWADPQVAGRGRVPPAALV*GSAAPC
Trigger: GCAAGGAGCAGCTGAGCCCCACACCAGTGCTGCTGG...TGGGACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCCCAGAGTCCCTGCAGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp CTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTGGCAGGGGAGAGTGGGGGCGGTaGCTTGGGCCAGCTGCCCGG +
Preference number: 4 (lower is better)
Translates to: LHRSPPGVHGRKKAECGRGEWGR*LGPAAR
Trigger: CCGGGCAGCTGGCCCAAGCCACCGCCCCCACTCTCC...CCTGCCACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000313400.9
ENST00000361209.6
CDS-3UTR GCA 90 bp CTGCAGGGACTCTGGGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCCCACAAGGCTCAGCTGCTCCTTaGCTGGCCGGCGGCAAAGGT +
Preference number: 4 (lower is better)
Translates to: LQGLWADPQVAGRGRVPQGSAAP*LAGGKG
Trigger: ACCTTTGCCGCCGGCCAGGCAAGGAGCAGCTGAGCC...TTGTGGGACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCCCAGAGTCCCTGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp GGCCTTGCTGGCAAGCTTCATCTGCTAGGCCCATCCTCAGCTGTCCCCCAGCCCGCTGCAGAAGGGGGCTaGAGTTGGGGAGCCCATTGG +
Preference number: 4 (lower is better)
Translates to: GLAGKLHLLGPSSAVPQPAAEGG*SWGAHW
Trigger: CCAATGGGCTCCCCAACTGCAGCCCCCTTCTGCAGC...GGGCTGGGGGACAGCTGAGGATGGGCCTAGCAGATGAAGCTTGCCAGCAAGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp GGCCTGCAGGGACTCTGGGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCCCAATGCATGGACAGGCCTaGAGGGACTCTGGGCAGACC +
Preference number: 4 (lower is better)
Translates to: GLQGLWADPQVAGRGRVPMHGQA*RDSGQT
Trigger: GGTCTGCCCAGAGTCCCTGCAGGCCTGTCCATGCAT...TGGGACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCCCAGAGTCCCTGCAGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp GGCCCCAGGATCCAGGAGAATACTGCTCCCCCTCCCATGGAGAGTCTCTGTGCTTTGTCCAGGTCGTCCTaGACCGCGATGCGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: GPRIQENTAPPPMESLCALSRSS*TAMRPG
Trigger: GCCGGGGCGCATCGCGGTGCAGGACGACCTGGACAA...AGCACAGAGACTCTCCATGGGAGGGGGAGCAGTATTCTCCTGGATCCTGGGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000313400.9
ENST00000361209.6
CDS-3UTR GCA 90 bp ACAGGCCTGCAGGGACTCTGGGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCATGCGGCGACGCTTCTaGCAACGTCGCTGGGCGTAC +
Preference number: 4 (lower is better)
Translates to: TGLQGLWADPQVAGRGRVMRRRF*QRRWAY
Trigger: GTACGCCCAGCGACGTTGGCAGAAGCGTCGCCGCAT...GACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCCCAGAGTCCCTGCAGGCCTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313400.9
ENST00000361209.6
CDS-3UTR GCA 90 bp GGCCTGCAGGGACTCTGGGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCCCATCTTCCCTGCCGATGTaGTGCGCAGGGGTGGTTGCA +
Preference number: 4 (lower is better)
Translates to: GLQGLWADPQVAGRGRVPSSLPM*CAGVVA
Trigger: TGCAACCACCCCTGCGCAGCACATCGGCAGGGAAGA...TGGGACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCCCAGAGTCCCTGCAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313400.9
ENST00000373986.7
CDS-3UTR GCA 90 bp GGCCTTGCTGGCAAGCTTCATCTGCTAGGCCCATCCTCAGCTGTCCCCCAGCCCTGCTGCGGCGGCGACTaGGGTACTGCTCCGTGTAGA +
Preference number: 4 (lower is better)
Translates to: GLAGKLHLLGPSSAVPQPCCGGD*GTAPCR
Trigger: TCTACACGGAGCAGTACCGCAGTCGCCGCCGCAGCA...GGGCTGGGGGACAGCTGAGGATGGGCCTAGCAGATGAAGCTTGCCAGCAAGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp GGCCCCAGGATCCAGGAGAATACTGCTCCCCCTCCCATGGAGAGTCTCTGTGCTGGAGGGCTCCACTGTTaGGGACAGCCGCAGCACCGG +
Preference number: 4 (lower is better)
Translates to: GPRIQENTAPPPMESLCAGGLHC*GQPQHR
Trigger: CCGGTGCTGCGGCTGTCCCCAACAGTGGAGCCCTCC...AGCACAGAGACTCTCCATGGGAGGGGGAGCAGTATTCTCCTGGATCCTGGGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp ACAGGCCTGCAGGGACTCTGGGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCTCAGGTGGGCCTTCCTaGGCCCCAGCTCATCCTCAC +
Preference number: 4 (lower is better)
Translates to: TGLQGLWADPQVAGRGRVSGGPS*APAHPH
Trigger: GTGAGGATGAGCTGGGGCCCAGGAAGGCCCACCTGA...GACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCCCAGAGTCCCTGCAGGCCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp AGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTGGCAGGAAGAAGGTGGGGGCGGTGGCTTaGGCCAGCTGCCCGGAGCTG +
Preference number: 4 (lower is better)
Translates to: RSPPGVHGRKKAECGRKKVGAVA*ASCPEL
Trigger: CAGCTCCGGGCAGCTGGCCCAAGCCACCGCCCCCAC...CTTCTTCCTGCCACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313400.9
ENST00000361209.6
CDS-3UTR TCA 90 bp GGCCTGCAGGGACTCTGGGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCCCATGGCATCAAAGGCGCTaGGGTCACACCTGCACCAGT +
Preference number: 4 (lower is better)
Translates to: GLQGLWADPQVAGRGRVPWHQRR*GHTCTS
Trigger: ACTGGTGCAGGTGTGACCTCAGCGCCTTTGATGCCA...TGGGACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCCCAGAGTCCCTGCAGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR TCA 90 bp CTGCAGGGACTCTGGGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCCCACAATTCATCGTCTGCCTCTaGGCCCGACGTCCCCTTGGC +
Preference number: 4 (lower is better)
Translates to: LQGLWADPQVAGRGRVPQFIVCL*ARRPLG
Trigger: GCCAAGGGGACGTCGGGCTCAGAGGCAGACGATGAA...TTGTGGGACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCCCAGAGTCCCTGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR TCA 90 bp CAGGGACTCTGGGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCCCACAAACTAGCTGGCCAGGGGGTTaGTGGACAGCTCCACAGGCG +
Preference number: 4 (lower is better)
Translates to: QGLWADPQVAGRGRVPQTSWPGG*WTAPQA
Trigger: CGCCTGTGGAGCTGTCCATCAACCCCCTGGCCAGCT...AGTTTGTGGGACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCCCAGAGTCCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR TCA 90 bp ACAGGCCTGCAGGGACTCTGGGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCCTGCAGGGTCTTCCGTaGCGAGCACATCGGTCTTGC +
Preference number: 4 (lower is better)
Translates to: TGLQGLWADPQVAGRGRVLQGLP*RAHRSC
Trigger: GCAAGACCGATGTGCTCGTCACGGAAGACCCTGCAG...GACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCCCAGAGTCCCTGCAGGCCTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR TCA 90 bp GGCCTGCAGGGACTCTGGGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCCCAGGTCAGACACACACTTaGAGTTGCGAGTGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: GLQGLWADPQVAGRGRVPGQTHT*SCECSP
Trigger: GGGGCTGCACTCGCAACTTCAAGTGTGTGTCTGACC...TGGGACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCCCAGAGTCCCTGCAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR TCA 90 bp GGCCTGCAGGGACTCTGGGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCCCAAGCCATAGTGCTGGATaGAGGACAGCAGCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: GLQGLWADPQVAGRGRVPSHSAG*RTAAPP
Trigger: GGGAGGAGCTGCTGTCCTTCATCCAGCACTATGGCT...TGGGACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCCCAGAGTCCCTGCAGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp GGCCTGCAGGGACTCTGGGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCCCATCCTCAGGGTCACCGTaGTTAGCTCTGAGTGCCTCC +
Preference number: 4 (lower is better)
Translates to: GLQGLWADPQVAGRGRVPSSGSP*LALSAS
Trigger: GGAGGCACTCAGAGCTAAGCACGGTGACCCTGAGGA...TGGGACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCCCAGAGTCCCTGCAGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp CTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTGGCAGGTTGTCCAGGTCGTCCTaGACCGCGATGCGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: LHRSPPGVHGRKKAECGRLSRSS*TAMRPG
Trigger: GCCGGGGCGCATCGCGGTGCAGGACGACCTGGACAA...CCTGCCACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313400.9
ENST00000361209.6
CDS-3UTR GCA 90 bp GGCCTGCAGGGACTCTGGGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCCCACCCGAGGAATCCACCTaGCGGTCAGACACACACTTG +
Preference number: 4 (lower is better)
Translates to: GLQGLWADPQVAGRGRVPPEEST*RSDTHL
Trigger: CAAGTGTGTGTCTGACCGGCAGGTGGATTCCTCGGG...TGGGACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCCCAGAGTCCCTGCAGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp CTGCAGGGACTCTGGGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCCCACAACAGCTGCTCCTTGCCTaGCCGGCGGCAAAGGTGACA +
Preference number: 4 (lower is better)
Translates to: LQGLWADPQVAGRGRVPQQLLLA*PAAKVT
Trigger: TGTCACCTTTGCCGCCGGCCAGGCAAGGAGCAGCTG...TTGTGGGACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCCCAGAGTCCCTGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp ACAGGCCTGCAGGGACTCTGGGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCCTGCTCCCCCTCCCATaGAGAGTCTCTGTGCTCACG +
Preference number: 4 (lower is better)
Translates to: TGLQGLWADPQVAGRGRVLLPLP*RVSVLT
Trigger: CGTGAGCACAGAGACTCTCCATGGGAGGGGGAGCAG...GACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCCCAGAGTCCCTGCAGGCCTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp GGCCTGCAGGGACTCTGGGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCCCAGCACTCTCCGGTTTCTaGGTCGCAGAGCTGCTCACA +
Preference number: 4 (lower is better)
Translates to: GLQGLWADPQVAGRGRVPALSGF*VAELLT
Trigger: TGTGAGCAGCTCTGCGACCCAGAAACCGGAGAGTGC...TGGGACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCCCAGAGTCCCTGCAGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR TCA 90 bp GGCCTTGCTGGCAAGCTTCATCTGCTAGGCCCATCCTCAGCTGTCCCCCAGCCCGGTCAGACACACACTTaGAGTTGCGAGTGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: GLAGKLHLLGPSSAVPQPGQTHT*SCECSP
Trigger: GGGGCTGCACTCGCAACTTCAAGTGTGTGTCTGACC...GGGCTGGGGGACAGCTGAGGATGGGCCTAGCAGATGAAGCTTGCCAGCAAGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp CTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTGGCAGGGGCTCAGCTGCTCCTTaGCTGGCCGGCGGCAAAGGT +
Preference number: 4 (lower is better)
Translates to: LHRSPPGVHGRKKAECGRGSAAP*LAGGKG
Trigger: ACCTTTGCCGCCGGCCAGGCAAGGAGCAGCTGAGCC...CCTGCCACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp TCAGGTCAAAACTGTCCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAGGTGTGGGGCTCAGCTaGTCCTTGCCTGGCCGGCGG +
Preference number: 4 (lower is better)
Translates to: SGQNCPSIGLLQGSMAGRGVGLS*SLPGRR
Trigger: CCGCCGGCCAGGCAAGGAGCAGCTGAGCCCCACACC...TCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGGACAGTTTTGACCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp CAGGGACTCTGGGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCCCACAAACTGCTGCAGAAGGGGGCTaGAGTTGGGGAGCCCATTGG +
Preference number: 4 (lower is better)
Translates to: QGLWADPQVAGRGRVPQTAAEGG*SWGAHW
Trigger: CCAATGGGCTCCCCAACTGCAGCCCCCTTCTGCAGC...AGTTTGTGGGACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCCCAGAGTCCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp ACAGGCCTGCAGGGACTCTGGGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCTGCTATACCACACCATaGCTGCAGGCCGGACCTCCT +
Preference number: 4 (lower is better)
Translates to: TGLQGLWADPQVAGRGRVCYTTP*LQAGPP
Trigger: AGGAGGTCCGGCCTGCAGGCATGGTGTGGTATAGCA...GACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCCCAGAGTCCCTGCAGGCCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp GGCCTTGCTGGCAAGCTTCATCTGCTAGGCCCATCCTCAGCTGTCCCCCAGCCCTGCTATACCACACCATaGCTGCAGGCCGGACCTCCT +
Preference number: 4 (lower is better)
Translates to: GLAGKLHLLGPSSAVPQPCYTTP*LQAGPP
Trigger: AGGAGGTCCGGCCTGCAGGCATGGTGTGGTATAGCA...GGGCTGGGGGACAGCTGAGGATGGGCCTAGCAGATGAAGCTTGCCAGCAAGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp GGGTCAGGTCAAAACTGTCCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAGTGGCTTGGGCCAGCTaGCCGGAGCTGCTCATGGAG +
Preference number: 4 (lower is better)
Translates to: GSGQNCPSIGLLQGSMAGVAWAS*PELLME
Trigger: CTCCATGAGCAGCTCCGGGCAGCTGGCCCAAGCCAC...TCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGGACAGTTTTGACCTGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313400.9
ENST00000361209.6
CDS-3UTR GCA 90 bp GGCCCCAGGATCCAGGAGAATACTGCTCCCCCTCCCATGGAGAGTCTCTGTGCTTGCTGCGGCGGCGACTaGGGTACTGCTCCGTGTAGA +
Preference number: 4 (lower is better)
Translates to: GPRIQENTAPPPMESLCACCGGD*GTAPCR
Trigger: TCTACACGGAGCAGTACCGCAGTCGCCGCCGCAGCA...AGCACAGAGACTCTCCATGGGAGGGGGAGCAGTATTCTCCTGGATCCTGGGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp GGCCTTGCTGGCAAGCTTCATCTGCTAGGCCCATCCTCAGCTGTCCCCCAGCCCCCCGAGGAATCCACCTaGCGGTCAGACACACACTTG +
Preference number: 4 (lower is better)
Translates to: GLAGKLHLLGPSSAVPQPPEEST*RSDTHL
Trigger: CAAGTGTGTGTCTGACCGGCAGGTGGATTCCTCGGG...GGGCTGGGGGACAGCTGAGGATGGGCCTAGCAGATGAAGCTTGCCAGCAAGGCC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp GGCCTGCAGGGACTCTGGGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCCCATACTGGAGCCACAGCTaGTGCTGGACCTTCTTGCTG +
Preference number: 4 (lower is better)
Translates to: GLQGLWADPQVAGRGRVPYWSHS*CWTFLL
Trigger: CAGCAAGAAGGTCCAGCAGCAGCTGTGGCTCCAGTA...TGGGACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCCCAGAGTCCCTGCAGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp CAGGGACTCTGGGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCCCACAAACTCCAGCAGCACTGGTGTaGGGCTCAGCTGCTCCTTGC +
Preference number: 4 (lower is better)
Translates to: QGLWADPQVAGRGRVPQTPAALV*GSAAPC
Trigger: GCAAGGAGCAGCTGAGCCCCACACCAGTGCTGCTGG...AGTTTGTGGGACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCCCAGAGTCCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp ACAGGCCTGCAGGGACTCTGGGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCAGGAGACCACAGTACTaGAGGGCTCCACTGTTGGGG +
Preference number: 4 (lower is better)
Translates to: TGLQGLWADPQVAGRGRVRRPQY*RAPLLG
Trigger: CCCCAACAGTGGAGCCCTCCAGTACTGTGGTCTCCT...GACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCCCAGAGTCCCTGCAGGCCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp AGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTGGCAGGAAGAAGAGGGCTCCTGGAGAGTaGGGGCGGTGGCTTGGGCCA +
Preference number: 4 (lower is better)
Translates to: RSPPGVHGRKKAECGRKKRAPGE*GRWLGP
Trigger: TGGCCCAAGCCACCGCCCCCACTCTCCAGGAGCCCT...CTTCTTCCTGCCACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313400.9
ENST00000361209.6
CDS-3UTR CCA 90 bp GGCCCCAGGATCCAGGAGAATACTGCTCCCCCTCCCATGGAGAGTCTCTGTGCTTTCTGCCAACGTCGCTaGGCGTACAGCGCCACGGTG +
Preference number: 4 (lower is better)
Translates to: GPRIQENTAPPPMESLCAFCQRR*AYSATV
Trigger: CACCGTGGCGCTGTACGCCCAGCGACGTTGGCAGAA...AGCACAGAGACTCTCCATGGGAGGGGGAGCAGTATTCTCCTGGATCCTGGGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313400.9
ENST00000361209.6
CDS-3UTR CCA 90 bp AGACTGAGGGCCAGAAAGCGGCAGAGCCCAGGGTTGCACAGTGAGCTTATTAGCATTGCCTGGCCTCTGTaGGCGGCCCGGCCGCCTTTC +
Preference number: 4 (lower is better)
Translates to: RLRARKRQSPGLHSELISIAWPL*AARPPF
Trigger: GAAAGGCGGCCGGGCCGCCCACAGAGGCCAGGCAAT...GCTAATAAGCTCACTGTGCAACCCTGGGCTCTGCCGCTTTCTGGCCCTCAGTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417725.1
CDS-3UTR CCA 90 bp GCCAGAAAGCGGCAGAGCCCAGGGTTGCACAGTGAGCTTATTAGCAGCACCAGGACTGAGTGGATTGCCTaGCCTCTGTGGGCGGCCCGG +
Preference number: 4 (lower is better)
Translates to: ARKRQSPGLHSELISSTRTEWIA*PLWAAR
Trigger: CCGGGCCGCCCACAGAGGCCAGGCAATCCACTCAGT...CCTGGTGCTGCTAATAAGCTCACTGTGCAACCCTGGGCTCTGCCGCTTTCTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417725.1
CDS-3UTR TCA 90 bp TGTCCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTGGGTTTGCAGCCGGGATaGACGGAAGCTCTCCCGCGC +
Preference number: 4 (lower is better)
Translates to: CPSIGLLQGSMAGRKQSVGLQPG*TEALPR
Trigger: GCGCGGGAGAGCTTCCGTTCATCCCGGCTGCAAACC...CACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313400.9
ENST00000361209.6
CDS-3UTR GCA 90 bp CTCAGAGCTTCCTTCCTGGTGCTGAAGAGGTCAAAACTGTCTCCTCTAGGGGTCGGTGTGGGGCTCAGCTaGTCCTTGCCTGGCCGGCGG +
Preference number: 4 (lower is better)
Translates to: LRASFLVLKRSKLSPLGVGVGLS*SLPGRR
Trigger: CCGCCGGCCAGGCAAGGAGCAGCTGAGCCCCACACC...GACCCCTAGAGGAGACAGTTTTGACCTCTTCAGCACCAGGAAGGAAGCTCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp AGGAGAAACCGTTTGCTTTGGCCTTGCTGGCAAGCTTCATCTGCTAGGCCCATCGGTGTGGGGCTCAGCTaGTCCTTGCCTGGCCGGCGG +
Preference number: 4 (lower is better)
Translates to: RRNRLLWPCWQASSARPIGVGLS*SLPGRR
Trigger: CCGCCGGCCAGGCAAGGAGCAGCTGAGCCCCACACC...GATGGGCCTAGCAGATGAAGCTTGCCAGCAAGGCCAAAGCAAACGGTTTCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp CCTCAGAGCTTCCTTCCTGGTGCTGAAGAGGTCAAAACTGTCTCCTCTAGGGGTGGTGTGGGGCTCAGCTaGTCCTTGCCTGGCCGGCGG +
Preference number: 4 (lower is better)
Translates to: PQSFLPGAEEVKTVSSRGGVGLS*SLPGRR
Trigger: CCGCCGGCCAGGCAAGGAGCAGCTGAGCCCCACACC...ACCCCTAGAGGAGACAGTTTTGACCTCTTCAGCACCAGGAAGGAAGCTCTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp CCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTGGCAGCTGCAGAAGGGGGCTaGAGTTGGGGAGCCCATTGG +
Preference number: 4 (lower is better)
Translates to: PSIGLLQGSMAGRKQSVAAAEGG*SWGAHW
Trigger: CCAATGGGCTCCCCAACTGCAGCCCCCTTCTGCAGC...TGCCACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp GGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCCCACAAACTCAATAATGTCCGGAAGAGGAGGCAGCTaGGGAGACGGCGGACGCCGA +
Preference number: 4 (lower is better)
Translates to: GRPTGSRKRQGPTNSIMSGRGGS*GDGGRR
Trigger: TCGGCGTCCGCCGTCTCCGCAGCTGCCTCCTCTTCC...GGACATTATTGAGTTTGTGGGACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313400.9
ENST00000361209.6
CDS-3UTR GCA 90 bp GGCCTTGCTGGCAAGCTTCATCTGCTAGGCCCATCCTCAGCTGTCCCCCAGCCCTACTGGAGCCACAGCTaGTGCTGGACCTTCTTGCTG +
Preference number: 4 (lower is better)
Translates to: GLAGKLHLLGPSSAVPQPYWSHS*CWTFLL
Trigger: CAGCAAGAAGGTCCAGCAGCAGCTGTGGCTCCAGTA...GGGCTGGGGGACAGCTGAGGATGGGCCTAGCAGATGAAGCTTGCCAGCAAGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp ACAGGCCTGCAGGGACTCTGGGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCAAGGTGACAGGTAGATaGACAGCGCCCCTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: TGLQGLWADPQVAGRGRVKVTGR*TAPLLL
Trigger: GAGGAGAAGGGGCGCTGTCCATCTACCTGTCACCTT...GACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCCCAGAGTCCCTGCAGGCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp CTGCAGGGACTCTGGGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCCCACAAGATTTCCAGCAGCACTaGTGTGGGGCTCAGCTGCTC +
Preference number: 4 (lower is better)
Translates to: LQGLWADPQVAGRGRVPQDFQQH*CGAQLL
Trigger: GAGCAGCTGAGCCCCACACCAGTGCTGCTGGAAATC...TTGTGGGACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCCCAGAGTCCCTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp TCAGGTCAAAACTGTCCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAGGAGGGCTCCACTGTTaGGGACAGCCGCAGCACCGG +
Preference number: 4 (lower is better)
Translates to: SGQNCPSIGLLQGSMAGRGGLHC*GQPQHR
Trigger: CCGGTGCTGCGGCTGTCCCCAACAGTGGAGCCCTCC...TCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGGACAGTTTTGACCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp CACAGGAGAAACCGTTTGCTTTGGCCTTGCTGGCAAGCTTCATCTGCTAGGCCCGGAGGGCTCCACTGTTaGGGACAGCCGCAGCACCGG +
Preference number: 4 (lower is better)
Translates to: HRRNRLLWPCWQASSARPGGLHC*GQPQHR
Trigger: CCGGTGCTGCGGCTGTCCCCAACAGTGGAGCCCTCC...GGGCCTAGCAGATGAAGCTTGCCAGCAAGGCCAAAGCAAACGGTTTCTCCTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp GGGTCAGGTCAAAACTGTCCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGATCAGGTGGGCCTTCCTaGGCCCCAGCTCATCCTCAC +
Preference number: 4 (lower is better)
Translates to: GSGQNCPSIGLLQGSMAGSGGPS*APAHPH
Trigger: GTGAGGATGAGCTGGGGCCCAGGAAGGCCCACCTGA...TCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGGACAGTTTTGACCTGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp AGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTGGCAGGAAGAAGCGCCGTAGAATCAGGTaGGCCTTCCTGGGCCCCAGC +
Preference number: 4 (lower is better)
Translates to: RSPPGVHGRKKAECGRKKRRRIR*AFLGPS
Trigger: GCTGGGGCCCAGGAAGGCCCACCTGATTCTACGGCG...CTTCTTCCTGCCACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp GGCCCCAGGATCCAGGAGAATACTGCTCCCCCTCCCATGGAGAGTCTCTGTGCTTCCCTCACCGGCCCTTaGACTCCCCGTACGTGTTTC +
Preference number: 4 (lower is better)
Translates to: GPRIQENTAPPPMESLCASLTGP*TPRTCF
Trigger: GAAACACGTACGGGGAGTCCAAGGGCCGGTGAGGGA...AGCACAGAGACTCTCCATGGGAGGGGGAGCAGTATTCTCCTGGATCCTGGGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp CAGGGACTCTGGGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCCCACAAACTTCCCTCACCGGCCCTTaGACTCCCCGTACGTGTTTC +
Preference number: 4 (lower is better)
Translates to: QGLWADPQVAGRGRVPQTSLTGP*TPRTCF
Trigger: GAAACACGTACGGGGAGTCCAAGGGCCGGTGAGGGA...AGTTTGTGGGACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCCCAGAGTCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp AAACTGTCTCCTCTAGGGGTCAGGTCAAAACTGTCCCTCCATAGGTCTCCTCCAGTGGGGGCGGTGGCTTaGGCCAGCTGCCCGGAGCTG +
Preference number: 4 (lower is better)
Translates to: KLSPLGVRSKLSLHRSPPVGAVA*ASCPEL
Trigger: CAGCTCCGGGCAGCTGGCCCAAGCCACCGCCCCCAC...TGGAGGAGACCTATGGAGGGACAGTTTTGACCTGACCCCTAGAGGAGACAGTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000313400.9
ENST00000361209.6
CDS-3UTR CCA 90 bp CTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTGGCAGGGTGCTTGCGCTCTTCTaGGGGATGCGGCGACGCTTC +
Preference number: 4 (lower is better)
Translates to: LHRSPPGVHGRKKAECGRVLALF*GMRRRF
Trigger: GAAGCGTCGCCGCATCCCCCAGAAGAGCGCAAGCAC...CCTGCCACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313400.9
ENST00000361209.6
CDS-3UTR CCA 90 bp GGCCCCAGGATCCAGGAGAATACTGCTCCCCCTCCCATGGAGAGTCTCTGTGCTGTTGGCCCGCCTAGGTaGCTCCTCATCCTCCTCACA +
Preference number: 4 (lower is better)
Translates to: GPRIQENTAPPPMESLCAVGPPR*LLILLT
Trigger: TGTGAGGAGGATGAGGAGCCACCTAGGCGGGCCAAC...AGCACAGAGACTCTCCATGGGAGGGGGAGCAGTATTCTCCTGGATCCTGGGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp CTGCAGGGACTCTGGGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCCCACAAAGAGTGTGGGTCACCTaGCTGCCAAACTCGTCCTCG +
Preference number: 4 (lower is better)
Translates to: LQGLWADPQVAGRGRVPQRVWVT*LPNSSS
Trigger: CGAGGACGAGTTTGGCAGCCAGGTGACCCACACTCT...TTGTGGGACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCCCAGAGTCCCTGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp GGCCTTGCTGGCAAGCTTCATCTGCTAGGCCCATCCTCAGCTGTCCCCCAGCCCTGGAAGACTTGGCCTTaGTTCACATGCTGGGTCCGG +
Preference number: 4 (lower is better)
Translates to: GLAGKLHLLGPSSAVPQPWKTWP*FTCWVR
Trigger: CCGGACCCAGCATGTGAACCAAGGCCAAGTCTTCCA...GGGCTGGGGGACAGCTGAGGATGGGCCTAGCAGATGAAGCTTGCCAGCAAGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp GCAAAGGCCGCTTGGTCTCCACCTGAAAACTTCTGCCTCGGGATTGACAGCCATCTTGCCCCGCGCGCTTaGGGCCAGCTGCACGACAAG +
Preference number: 4 (lower is better)
Translates to: AKAAWSPPENFCLGIDSHLAPRA*GQLHDK
Trigger: CTTGTCGTGCAGCTGGCCCCAAGCGCGCGGGGCAAG...ATGGCTGTCAATCCCGAGGCAGAAGTTTTCAGGTGGAGACCAAGCGGCCTTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341734.8
CDS-3UTR TCA 90 bp GCAAAGGCCGCTTGGTCTCCACCTGAAAACTTCTGCCTCGGGATTGACAGCCATGGCCGGCGGCAAAGGTaGCAGGTAGATGGACAGCGC +
Preference number: 4 (lower is better)
Translates to: AKAAWSPPENFCLGIDSHGRRQR*QVDGQR
Trigger: GCGCTGTCCATCTACCTGTCACCTTTGCCGCCGGCC...ATGGCTGTCAATCCCGAGGCAGAAGTTTTCAGGTGGAGACCAAGCGGCCTTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR TCA 90 bp GGCCTTGCTGGCAAGCTTCATCTGCTAGGCCCATCCTCAGCTGTCCCCCAGCCCCACATCCCCTTTCCCTaGGCACCAGTAGGAACTCAT +
Preference number: 4 (lower is better)
Translates to: GLAGKLHLLGPSSAVPQPHIPFP*APVGTH
Trigger: ATGAGTTCCTACTGGTGCTCAGGGAAAGGGGATGTG...GGGCTGGGGGACAGCTGAGGATGGGCCTAGCAGATGAAGCTTGCCAGCAAGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR TCA 90 bp ACAGGCCTGCAGGGACTCTGGGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCCACATCCCCTTTCCCTaGGCACCAGTAGGAACTCAT +
Preference number: 4 (lower is better)
Translates to: TGLQGLWADPQVAGRGRVHIPFP*APVGTH
Trigger: ATGAGTTCCTACTGGTGCTCAGGGAAAGGGGATGTG...GACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCCCAGAGTCCCTGCAGGCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR TCA 90 bp GGCCCCAGGATCCAGGAGAATACTGCTCCCCCTCCCATGGAGAGTCTCTGTGCTTGGCATCAAAGGCGCTaGGGTCACACCTGCACCAGT +
Preference number: 4 (lower is better)
Translates to: GPRIQENTAPPPMESLCAWHQRR*GHTCTS
Trigger: ACTGGTGCAGGTGTGACCTCAGCGCCTTTGATGCCA...AGCACAGAGACTCTCCATGGGAGGGGGAGCAGTATTCTCCTGGATCCTGGGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR TCA 90 bp ACAGGCCTGCAGGGACTCTGGGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCCCACAGCATACAGAGTaGACTTGTAGAGACCGTCGG +
Preference number: 4 (lower is better)
Translates to: TGLQGLWADPQVAGRGRVPQHTE*TCRDRR
Trigger: CCGACGGTCTCTACAAGTTCACTCTGTATGCTGTGG...GACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCCCAGAGTCCCTGCAGGCCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR TCA 90 bp GGCCTTGCTGGCAAGCTTCATCTGCTAGGCCCATCCTCAGCTGTCCCCCAGCCCCCACAGCATACAGAGTaGACTTGTAGAGACCGTCGG +
Preference number: 4 (lower is better)
Translates to: GLAGKLHLLGPSSAVPQPPQHTE*TCRDRR
Trigger: CCGACGGTCTCTACAAGTTCACTCTGTATGCTGTGG...GGGCTGGGGGACAGCTGAGGATGGGCCTAGCAGATGAAGCTTGCCAGCAAGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR TCA 90 bp CACAGGAGAAACCGTTTGCTTTGGCCTTGCTGGCAAGCTTCATCTGCTAGGCCCGCAGTGTGGACACCGTaGCGGTCTTCAGCCGGCACG +
Preference number: 4 (lower is better)
Translates to: HRRNRLLWPCWQASSARPAVWTP*RSSAGT
Trigger: CGTGCCGGCTGAAGACCGTCACGGTGTCCACACTGC...GGGCCTAGCAGATGAAGCTTGCCAGCAAGGCCAAAGCAAACGGTTTCTCCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313400.9
ENST00000361209.6
CDS-3UTR TCA 90 bp TTGCTTTGGCCTTGCTGGCAAGCTTCATCTGCTAGGCCCATCCTCAGCTGTCCCCGTACAGCGCCACGGTaGACACCAGCAGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: LLWPCWQASSARPILSCPRTAPR*TPAAAA
Trigger: TGCTGCTGCTGCTGGTGTTCACCGTGGCGCTGTACG...GGGACAGCTGAGGATGGGCCTAGCAGATGAAGCTTGCCAGCAAGGCCAAAGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313400.9
ENST00000361209.6
CDS-3UTR TCA 90 bp AGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTGGCAGGAAGAAGAGGGGTGGTTGCAGCTaGCCGATCTCGATGGGCGTG +
Preference number: 4 (lower is better)
Translates to: RSPPGVHGRKKAECGRKKRGGCS*PISMGV
Trigger: CACGCCCATCGAGATCGGTCAGCTGCAACCACCCCT...CTTCTTCCTGCCACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313400.9
ENST00000373986.7
CDS-3UTR TCA 90 bp CTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTGGCAGGGATGCAGGTGAGCTCTaGGCCATAGAGGGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: LHRSPPGVHGRKKAECGRDAGEL*AIEGLC
Trigger: GCAGAGGCCCTCTATGGCTCAGAGCTCACCTGCATC...CCTGCCACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp TCAGGTCAAAACTGTCCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAGGCTCAGCTGCTCCTTaGCTGGCCGGCGGCAAAGGT +
Preference number: 4 (lower is better)
Translates to: SGQNCPSIGLLQGSMAGRGSAAP*LAGGKG
Trigger: ACCTTTGCCGCCGGCCAGGCAAGGAGCAGCTGAGCC...TCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGGACAGTTTTGACCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp GGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCCCACAAACTCAATAATGTCCGGCTCAGCTGCTCCTTaGCTGGCCGGCGGCAAAGGT +
Preference number: 4 (lower is better)
Translates to: GRPTGSRKRQGPTNSIMSGSAAP*LAGGKG
Trigger: ACCTTTGCCGCCGGCCAGGCAAGGAGCAGCTGAGCC...GGACATTATTGAGTTTGTGGGACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp GGCCTGCAGGGACTCTGGGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCCCACTGCTACACAAGATGTaGCCAGGCCAGAGAGTAAGT +
Preference number: 4 (lower is better)
Translates to: GLQGLWADPQVAGRGRVPLLHKM*PGQRVS
Trigger: ACTTACTCTCTGGCCTGGGCACATCTTGTGTAGCAG...TGGGACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCCCAGAGTCCCTGCAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp ACAGGCCTGCAGGGACTCTGGGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCATGGCTTCGACCAGCTaGTACACAAGATGTGCCCAG +
Preference number: 4 (lower is better)
Translates to: TGLQGLWADPQVAGRGRVMASTS*YTRCAQ
Trigger: CTGGGCACATCTTGTGTAGCAGCTGGTCGAAGCCAT...GACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCCCAGAGTCCCTGCAGGCCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp CCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTGGCAGCCGGACCTCCTCGCTaGGGCAGAAAAGATAGGGCA +
Preference number: 4 (lower is better)
Translates to: PSIGLLQGSMAGRKQSVAAGPPR*GRKDRA
Trigger: TGCCCTATCTTTTCTGCCGCAGCGAGGAGGTCCGGC...TGCCACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp CTCAGAGCTTCCTTCCTGGTGCTGAAGAGGTCAAAACTGTCTCCTCTAGGGGTCGGAAGAGGAGGCAGCTaGGGAGACGGCGGACGCCGA +
Preference number: 4 (lower is better)
Translates to: LRASFLVLKRSKLSPLGVGRGGS*GDGGRR
Trigger: TCGGCGTCCGCCGTCTCCGCAGCTGCCTCCTCTTCC...GACCCCTAGAGGAGACAGTTTTGACCTCTTCAGCACCAGGAAGGAAGCTCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313400.9
ENST00000361209.6
CDS-3UTR GCA 90 bp CCTCAGAGCTTCCTTCCTGGTGCTGAAGAGGTCAAAACTGTCTCCTCTAGGGGTCGTCCTGCACCGCGATaGGCCCCGGCAGCTCGTTAC +
Preference number: 4 (lower is better)
Translates to: PQSFLPGAEEVKTVSSRGRPAPR*APAARY
Trigger: GTAACGAGCTGCCGGGGCGCATCGCGGTGCAGGACG...ACCCCTAGAGGAGACAGTTTTGACCTCTTCAGCACCAGGAAGGAAGCTCTGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000313400.9
ENST00000361209.6
CDS-3UTR GCA 90 bp GGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCCCACAAACTCAATAATGTCCGTGGCTTGGGCCAGCTaGCCGGAGCTGCTCATGGAG +
Preference number: 4 (lower is better)
Translates to: GRPTGSRKRQGPTNSIMSVAWAS*PELLME
Trigger: CTCCATGAGCAGCTCCGGGCAGCTGGCCCAAGCCAC...GGACATTATTGAGTTTGTGGGACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313400.9
ENST00000361209.6
CDS-3UTR GCA 90 bp GGCCTGCAGGGACTCTGGGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCCCACTGAGTCGCCTCAGCTaGTGCTTTCTTCTCAAAGTC +
Preference number: 4 (lower is better)
Translates to: GLQGLWADPQVAGRGRVPLSRLS*CFLLKV
Trigger: GACTTTGAGAAGAAAGCAGCAGCTGAGGCGACTCAG...TGGGACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCCCAGAGTCCCTGCAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313400.9
ENST00000373986.7
CDS-3UTR GCA 90 bp TTGCTTTGGCCTTGCTGGCAAGCTTCATCTGCTAGGCCCATCCTCAGCTGTCCCTGCTGCGGCGGCGACTaGGGTACTGCTCCGTGTAGA +
Preference number: 4 (lower is better)
Translates to: LLWPCWQASSARPILSCPCCGGD*GTAPCR
Trigger: TCTACACGGAGCAGTACCGCAGTCGCCGCCGCAGCA...GGGACAGCTGAGGATGGGCCTAGCAGATGAAGCTTGCCAGCAAGGCCAAAGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp GGCCCCAGGATCCAGGAGAATACTGCTCCCCCTCCCATGGAGAGTCTCTGTGCTTCTGGGTCGCAGAGCTaGTCACAGGCATCTGTCGTC +
Preference number: 4 (lower is better)
Translates to: GPRIQENTAPPPMESLCASGSQS*SQASVV
Trigger: GACGACAGATGCCTGTGAGCAGCTCTGCGACCCAGA...AGCACAGAGACTCTCCATGGGAGGGGGAGCAGTATTCTCCTGGATCCTGGGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp AGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTGGCAGGAAGAAGCAGCTGCTCCTTGCCTaGCCGGCGGCAAAGGTGACA +
Preference number: 4 (lower is better)
Translates to: RSPPGVHGRKKAECGRKKQLLLA*PAAKVT
Trigger: TGTCACCTTTGCCGCCGGCCAGGCAAGGAGCAGCTG...CTTCTTCCTGCCACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp CTGTCCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTCCAGCAGCACTGGTGTaGGGCTCAGCTGCTCCTTGC +
Preference number: 4 (lower is better)
Translates to: LSLHRSPPGVHGRKKAECPAALV*GSAAPC
Trigger: GCAAGGAGCAGCTGAGCCCCACACCAGTGCTGCTGG...ACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGGACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp CAGGGACTCTGGGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCCCACAAACTGATTTCCAGCAGCACTaGTGTGGGGCTCAGCTGCTC +
Preference number: 4 (lower is better)
Translates to: QGLWADPQVAGRGRVPQTDFQQH*CGAQLL
Trigger: GAGCAGCTGAGCCCCACACCAGTGCTGCTGGAAATC...AGTTTGTGGGACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCCCAGAGTCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp CTCAGAGCTTCCTTCCTGGTGCTGAAGAGGTCAAAACTGTCTCCTCTAGGGGTCGGAGGGCTCCACTGTTaGGGACAGCCGCAGCACCGG +
Preference number: 4 (lower is better)
Translates to: LRASFLVLKRSKLSPLGVGGLHC*GQPQHR
Trigger: CCGGTGCTGCGGCTGTCCCCAACAGTGGAGCCCTCC...GACCCCTAGAGGAGACAGTTTTGACCTCTTCAGCACCAGGAAGGAAGCTCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp GCAAAGGCCGCTTGGTCTCCACCTGAAAACTTCTGCCTCGGGATTGACAGCCATCGCCGTAGAATCAGGTaGGCCTTCCTGGGCCCCAGC +
Preference number: 4 (lower is better)
Translates to: AKAAWSPPENFCLGIDSHRRRIR*AFLGPS
Trigger: GCTGGGGCCCAGGAAGGCCCACCTGATTCTACGGCG...ATGGCTGTCAATCCCGAGGCAGAAGTTTTCAGGTGGAGACCAAGCGGCCTTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp AGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTGGCAGGAAGAAGCACTCCGCAGGAGGCTaGAGCAGTGGCTACTCACCC +
Preference number: 4 (lower is better)
Translates to: RSPPGVHGRKKAECGRKKHSAGG*SSGYSP
Trigger: GGGTGAGTAGCCACTGCTCCAGCCTCCTGCGGAGTG...CTTCTTCCTGCCACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp CTGTCCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTGGCCTGCAGGGACTCTaGGCAGACCCACAGGTAGCA +
Preference number: 4 (lower is better)
Translates to: LSLHRSPPGVHGRKKAECGLQGL*ADPQVA
Trigger: TGCTACCTGTGGGTCTGCCCAGAGTCCCTGCAGGCC...ACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGGACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp CAGGGACTCTGGGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCCCACAAACTGCCCGGAGCTGCTCATaGAGACGTGGAAGTACAAGG +
Preference number: 4 (lower is better)
Translates to: QGLWADPQVAGRGRVPQTARSCS*RRGSTR
Trigger: CCTTGTACTTCCACGTCTCCATGAGCAGCTCCGGGC...AGTTTGTGGGACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCCCAGAGTCCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313400.9
ENST00000361209.6
CDS-3UTR CCA 90 bp GGCCTGCAGGGACTCTGGGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCCCAACCCAGCAGCACAGATaGGATGTAGTGGATCTCATG +
Preference number: 4 (lower is better)
Translates to: GLQGLWADPQVAGRGRVPTQQHR*DVVDLM
Trigger: CATGAGATCCACTACATCCCATCTGTGCTGCTGGGT...TGGGACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCCCAGAGTCCCTGCAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313400.9
ENST00000361209.6
CDS-3UTR CCA 90 bp AGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTGGCAGGAAGAAGAAGCTCTCCCGCGCCTaGGGACCCAGCAGCACAGAT +
Preference number: 4 (lower is better)
Translates to: RSPPGVHGRKKAECGRKKKLSRA*GPSSTD
Trigger: ATCTGTGCTGCTGGGTCCCCAGGCGCGGGAGAGCTT...CTTCTTCCTGCCACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313400.9
ENST00000361209.6
CDS-3UTR CCA 90 bp GGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCCCACAAACTCAATAATGTCCTCCTCGCGGGAGACATaGTTGGCCCGCCTAGGTGGC +
Preference number: 4 (lower is better)
Translates to: GRPTGSRKRQGPTNSIMSSSRET*LARLGG
Trigger: GCCACCTAGGCGGGCCAACCATGTCTCCCGCGAGGA...GGACATTATTGAGTTTGTGGGACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp CTGCAGGGACTCTGGGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCCCACAAAGCCCATCGGCCAGCTaGGGAAAGTCCTTGATGAAG +
Preference number: 4 (lower is better)
Translates to: LQGLWADPQVAGRGRVPQSPSAS*GKSLMK
Trigger: CTTCATCAAGGACTTTCCCCAGCTGGCCGATGGGCT...TTGTGGGACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCCCAGAGTCCCTGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR TCA 90 bp GGCCCCAGGATCCAGGAGAATACTGCTCCCCCTCCCATGGAGAGTCTCTGTGCTGGCTGTCAGCAAACCTaGGAGGTAGGTGATGAAGGG +
Preference number: 4 (lower is better)
Translates to: GPRIQENTAPPPMESLCAGCQQT*EVGDEG
Trigger: CCCTTCATCACCTACCTCTCAGGTTTGCTGACAGCC...AGCACAGAGACTCTCCATGGGAGGGGGAGCAGTATTCTCCTGGATCCTGGGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR TCA 90 bp CCTCAGAGCTTCCTTCCTGGTGCTGAAGAGGTCAAAACTGTCTCCTCTAGGGGTGGCCGGCGGCAAAGGTaGCAGGTAGATGGACAGCGC +
Preference number: 4 (lower is better)
Translates to: PQSFLPGAEEVKTVSSRGGRRQR*QVDGQR
Trigger: GCGCTGTCCATCTACCTGTCACCTTTGCCGCCGGCC...ACCCCTAGAGGAGACAGTTTTGACCTCTTCAGCACCAGGAAGGAAGCTCTGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR TCA 90 bp AGGAGAAACCGTTTGCTTTGGCCTTGCTGGCAAGCTTCATCTGCTAGGCCCATCGGCCGGCGGCAAAGGTaGCAGGTAGATGGACAGCGC +
Preference number: 4 (lower is better)
Translates to: RRNRLLWPCWQASSARPIGRRQR*QVDGQR
Trigger: GCGCTGTCCATCTACCTGTCACCTTTGCCGCCGGCC...GATGGGCCTAGCAGATGAAGCTTGCCAGCAAGGCCAAAGCAAACGGTTTCTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR TCA 90 bp AGAAGAGCAAAGGCCGCTTGGTCTCCACCTGAAAACTTCTGCCTCGGGATTGACGGCCGGCGGCAAAGGTaGCAGGTAGATGGACAGCGC +
Preference number: 4 (lower is better)
Translates to: RRAKAAWSPPENFCLGIDGRRQR*QVDGQR
Trigger: GCGCTGTCCATCTACCTGTCACCTTTGCCGCCGGCC...GTCAATCCCGAGGCAGAAGTTTTCAGGTGGAGACCAAGCGGCCTTTGCTCTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR TCA 90 bp CTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTGGCAGGGTGGCACCACACGGTTaGTTTCCAGCAGCACTGGTG +
Preference number: 4 (lower is better)
Translates to: LHRSPPGVHGRKKAECGRVAPHG*FPAALV
Trigger: CACCAGTGCTGCTGGAAATCAACCGTGTGGTGCCAC...CCTGCCACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR TCA 90 bp GGGTCAGGTCAAAACTGTCCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGATGGCATCAAAGGCGCTaGGGTCACACCTGCACCAGT +
Preference number: 4 (lower is better)
Translates to: GSGQNCPSIGLLQGSMAGWHQRR*GHTCTS
Trigger: ACTGGTGCAGGTGTGACCTCAGCGCCTTTGATGCCA...TCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGGACAGTTTTGACCTGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR TCA 90 bp AGGAGAAACCGTTTGCTTTGGCCTTGCTGGCAAGCTTCATCTGCTAGGCCCATCGCAGTGTGGACACCGTaGCGGTCTTCAGCCGGCACG +
Preference number: 4 (lower is better)
Translates to: RRNRLLWPCWQASSARPIAVWTP*RSSAGT
Trigger: CGTGCCGGCTGAAGACCGTCACGGTGTCCACACTGC...GATGGGCCTAGCAGATGAAGCTTGCCAGCAAGGCCAAAGCAAACGGTTTCTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313400.9
ENST00000361209.6
CDS-3UTR TCA 90 bp CTCAGAGCTTCCTTCCTGGTGCTGAAGAGGTCAAAACTGTCTCCTCTAGGGGTCGGTTTGCAGCCGGGATaGACGGAAGCTCTCCCGCGC +
Preference number: 4 (lower is better)
Translates to: LRASFLVLKRSKLSPLGVGLQPG*TEALPR
Trigger: GCGCGGGAGAGCTTCCGTTCATCCCGGCTGCAAACC...GACCCCTAGAGGAGACAGTTTTGACCTCTTCAGCACCAGGAAGGAAGCTCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313400.9
ENST00000361209.6
CDS-3UTR TCA 90 bp GGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCCCACAAACTCAATAATGTCCAGGGGTGGTTGCAGCTaGCCGATCTCGATGGGCGTG +
Preference number: 4 (lower is better)
Translates to: GRPTGSRKRQGPTNSIMSRGGCS*PISMGV
Trigger: CACGCCCATCGAGATCGGTCAGCTGCAACCACCCCT...GGACATTATTGAGTTTGTGGGACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313400.9
ENST00000373986.7
CDS-3UTR TCA 90 bp AGGAGAAACCGTTTGCTTTGGCCTTGCTGGCAAGCTTCATCTGCTAGGCCCATCAGCTGGCCAGGGGGTTaGTGGACAGCTCCACAGGCG +
Preference number: 4 (lower is better)
Translates to: RRNRLLWPCWQASSARPISWPGG*WTAPQA
Trigger: CGCCTGTGGAGCTGTCCATCAACCCCCTGGCCAGCT...GATGGGCCTAGCAGATGAAGCTTGCCAGCAAGGCCAAAGCAAACGGTTTCTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR TCA 90 bp AGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTGGCAGGAAGAAGCTGCAGGGTCTTCCGTaGCGAGCACATCGGTCTTGC +
Preference number: 4 (lower is better)
Translates to: RSPPGVHGRKKAECGRKKLQGLP*RAHRSC
Trigger: GCAAGACCGATGTGCTCGTCACGGAAGACCCTGCAG...CTTCTTCCTGCCACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR TCA 90 bp CCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTGGCAGGTCAGACACACACTTaGAGTTGCGAGTGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: PSIGLLQGSMAGRKQSVAGQTHT*SCECSP
Trigger: GGGGCTGCACTCGCAACTTCAAGTGTGTGTCTGACC...TGCCACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR TCA 90 bp CAGGGACTCTGGGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCCCACAAACTCGCAACCGCAGAACATaGAGATGGTGCTCGAAGTGG +
Preference number: 4 (lower is better)
Translates to: QGLWADPQVAGRGRVPQTRNRRT*RWCSKW
Trigger: CCACTTCGAGCACCATCTTCATGTTCTGCGGTTGCG...AGTTTGTGGGACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCCCAGAGTCCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR TCA 90 bp GGCCCCAGGATCCAGGAGAATACTGCTCCCCCTCCCATGGAGAGTCTCTGTGCTCGCAACCGCAGAACATaGAGATGGTGCTCGAAGTGG +
Preference number: 4 (lower is better)
Translates to: GPRIQENTAPPPMESLCARNRRT*RWCSKW
Trigger: CCACTTCGAGCACCATCTTCATGTTCTGCGGTTGCG...AGCACAGAGACTCTCCATGGGAGGGGGAGCAGTATTCTCCTGGATCCTGGGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp AGAGAAGTCCTTAAAGACCCATGCTTCCTCACTGCAACCATCCTCAGAGCTTCCGGTGTGGGGCTCAGCTaGTCCTTGCCTGGCCGGCGG +
Preference number: 4 (lower is better)
Translates to: REVLKDPCFLTATILRASGVGLS*SLPGRR
Trigger: CCGCCGGCCAGGCAAGGAGCAGCTGAGCCCCACACC...GGAAGCTCTGAGGATGGTTGCAGTGAGGAAGCATGGGTCTTTAAGGACTTCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp GGCCTGCAGGGACTCTGGGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCCCAGTAGGAACTCATCAGTaGACTCTTGAAGGCCTCCTT +
Preference number: 4 (lower is better)
Translates to: GLQGLWADPQVAGRGRVPVGTHQ*TLEGLL
Trigger: AAGGAGGCCTTCAAGAGTGCACTGATGAGTTCCTAC...TGGGACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCCCAGAGTCCCTGCAGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp AAACTGTCCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGGCTGCAGAAGGGGGCTaGAGTTGGGGAGCCCATTGG +
Preference number: 4 (lower is better)
Translates to: KLSLHRSPPGVHGRKKAEAAEGG*SWGAHW
Trigger: CCAATGGGCTCCCCAACTGCAGCCCCCTTCTGCAGC...CTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGGACAGTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp CTGCAGGGACTCTGGGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCCCACAAGTGCTTAGCTCTGAGTaGCTCCCTCGTGTATCCACA +
Preference number: 4 (lower is better)
Translates to: LQGLWADPQVAGRGRVPQVLSSE*LPRVST
Trigger: TGTGGATACACGAGGGAGGCACTCAGAGCTAAGCAC...TTGTGGGACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCCCAGAGTCCCTGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp CCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTGGCATCCTCAGGGTCACCGTaGTTAGCTCTGAGTGCCTCC +
Preference number: 4 (lower is better)
Translates to: PSIGLLQGSMAGRKQSVASSGSP*LALSAS
Trigger: GGAGGCACTCAGAGCTAAGCACGGTGACCCTGAGGA...TGCCACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp TTGCTTTGGCCTTGCTGGCAAGCTTCATCTGCTAGGCCCATCCTCAGCTGTCCCGCCGGACCTCCTCGCTaGGGCAGAAAAGATAGGGCA +
Preference number: 4 (lower is better)
Translates to: LLWPCWQASSARPILSCPAGPPR*GRKDRA
Trigger: TGCCCTATCTTTTCTGCCGCAGCGAGGAGGTCCGGC...GGGACAGCTGAGGATGGGCCTAGCAGATGAAGCTTGCCAGCAAGGCCAAAGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp GGGTCAGGTCAAAACTGTCCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGATGCTATACCACACCATaGCTGCAGGCCGGACCTCCT +
Preference number: 4 (lower is better)
Translates to: GSGQNCPSIGLLQGSMAGCYTTP*LQAGPP
Trigger: AGGAGGTCCGGCCTGCAGGCATGGTGTGGTATAGCA...TCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGGACAGTTTTGACCTGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp GGCCTGCAGGGACTCTGGGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCCCAGTCCTTAAAGACCCATaGTTCCTCACTGCAACCATC +
Preference number: 4 (lower is better)
Translates to: GLQGLWADPQVAGRGRVPVLKDP*FLTATI
Trigger: GATGGTTGCAGTGAGGAAGCATGGGTCTTTAAGGAC...TGGGACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCCCAGAGTCCCTGCAGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp AAGAGAGAGAAGTCCTTAAAGACCCATGCTTCCTCACTGCAACCATCCTCAGAGGCGACTCGGCGGCGGTaGCGGCAGAGCCAGGAGAGC +
Preference number: 4 (lower is better)
Translates to: KREKSLKTHASSLQPSSEATRRR*RQSQES
Trigger: GCTCTCCTGGCTCTGCCGGCACCGCCGCCGAGTCGC...CTCTGAGGATGGTTGCAGTGAGGAAGCATGGGTCTTTAAGGACTTCTCTCTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313400.9
ENST00000361209.6
CDS-3UTR GCA 90 bp AAACTGTCTCCTCTAGGGGTCAGGTCAAAACTGTCCCTCCATAGGTCTCCTCCACGTCCTGCACCGCGATaGGCCCCGGCAGCTCGTTAC +
Preference number: 4 (lower is better)
Translates to: KLSPLGVRSKLSLHRSPPRPAPR*APAARY
Trigger: GTAACGAGCTGCCGGGGCGCATCGCGGTGCAGGACG...TGGAGGAGACCTATGGAGGGACAGTTTTGACCTGACCCCTAGAGGAGACAGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000313400.9
ENST00000361209.6
CDS-3UTR GCA 90 bp CTGTCCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTCCAGCTGCCCGGAGCTaGTCATGGAGACGTGGAAGT +
Preference number: 4 (lower is better)
Translates to: LSLHRSPPGVHGRKKAECPAARS*SWRRGS
Trigger: ACTTCCACGTCTCCATGAGCAGCTCCGGGCAGCTGG...ACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313400.9
ENST00000361209.6
CDS-3UTR GCA 90 bp CAAAGGCCGCTTGGTCTCCACCTGAAAACTTCTGCCTCGGGATTGACAGCCATCCGCTCTTCTGGGGGATaGGGCGACGCTTCTGCCAAC +
Preference number: 4 (lower is better)
Translates to: QRPLGLHLKTSASGLTAIRSSGG*GDASAN
Trigger: GTTGGCAGAAGCGTCGCCGCATCCCCCAGAAGAGCG...GATGGCTGTCAATCCCGAGGCAGAAGTTTTCAGGTGGAGACCAAGCGGCCTTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313400.9
ENST00000361209.6
CDS-3UTR GCA 90 bp CTGCAGGGACTCTGGGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCCCACAAACGGAATTGTGGGTTTaGAGCCGGGATGAACGGAAG +
Preference number: 4 (lower is better)
Translates to: LQGLWADPQVAGRGRVPQTELWV*SRDERK
Trigger: CTTCCGTTCATCCCGGCTGCAAACCCACAATTCCGT...TTGTGGGACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCCCAGAGTCCCTGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313400.9
ENST00000361209.6
CDS-3UTR GCA 90 bp TCAGGTCAAAACTGTCCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGATGTGGGTCACCTGGCTaGCAAACTCGTCCTCGCGGG +
Preference number: 4 (lower is better)
Translates to: SGQNCPSIGLLQGSMAGRCGSPG*QTRPRG
Trigger: CCCGCGAGGACGAGTTTGGCAGCCAGGTGACCCACA...TCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGGACAGTTTTGACCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp AGGAGAAACCGTTTGCTTTGGCCTTGCTGGCAAGCTTCATCTGCTAGGCCCATCCCGCTTCCTCTTCCCTaGCGATGTGCTGCGCAGGGG +
Preference number: 4 (lower is better)
Translates to: RRNRLLWPCWQASSARPIPLPLP*RCAAQG
Trigger: CCCCTGCGCAGCACATCGGCAGGGAAGAGGAAGCGG...GATGGGCCTAGCAGATGAAGCTTGCCAGCAAGGCCAAAGCAAACGGTTTCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313400.9
ENST00000373986.7
CDS-3UTR GCA 90 bp GGGTCAGGTCAAAACTGTCCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGATCAGCAAACCTTTGCTaGGGCGGCGACTGCGGTACT +
Preference number: 4 (lower is better)
Translates to: GSGQNCPSIGLLQGSMAGSANLC*GGDCGT
Trigger: AGTACCGCAGTCGCCGCCGCAGCAAAGGTTTGCTGA...TCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGGACAGTTTTGACCTGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp CTGTCCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTTCACACGGTAGAGGTTaGTCCGGACCCGCCACTGCT +
Preference number: 4 (lower is better)
Translates to: LSLHRSPPGVHGRKKAECSHGRG*SGPATA
Trigger: AGCAGTGGCGGGTCCGGAGCAACCTCTACCGTGTGA...ACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp CTGCAGGGACTCTGGGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCCCACAAATTAGTGAAGCCTGCTaGGAGGGTGATGGTGCTGAG +
Preference number: 4 (lower is better)
Translates to: LQGLWADPQVAGRGRVPQISEAC*EGDGAE
Trigger: CTCAGCACCATCACCCTCGCAGCAGGCTTCACTAAT...TTGTGGGACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCCCAGAGTCCCTGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp GGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCCCACAAACTCAATAATGTCCCAGCTGCTCCTTGCCTaGCCGGCGGCAAAGGTGACA +
Preference number: 4 (lower is better)
Translates to: GRPTGSRKRQGPTNSIMSQLLLA*PAAKVT
Trigger: TGTCACCTTTGCCGCCGGCCAGGCAAGGAGCAGCTG...GGACATTATTGAGTTTGTGGGACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp TCAGGTCAAAACTGTCCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGACCAGCAGCACTGGTGTaGGGCTCAGCTGCTCCTTGC +
Preference number: 4 (lower is better)
Translates to: SGQNCPSIGLLQGSMAGRPAALV*GSAAPC
Trigger: GCAAGGAGCAGCTGAGCCCCACACCAGTGCTGCTGG...TCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGGACAGTTTTGACCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp CCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTGGCAAGGAGACCACAGTACTaGAGGGCTCCACTGTTGGGG +
Preference number: 4 (lower is better)
Translates to: PSIGLLQGSMAGRKQSVARRPQY*RAPLLG
Trigger: CCCCAACAGTGGAGCCCTCCAGTACTGTGGTCTCCT...TGCCACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp GGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCCCACAAACTCAATAATGTCCTCAGGTGGGCCTTCCTaGGCCCCAGCTCATCCTCAC +
Preference number: 4 (lower is better)
Translates to: GRPTGSRKRQGPTNSIMSSGGPS*APAHPH
Trigger: GTGAGGATGAGCTGGGGCCCAGGAAGGCCCACCTGA...GGACATTATTGAGTTTGTGGGACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp TCAGGTCAAAACTGTCCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGATCAGGTGGGCCTTCCTaGGCCCCAGCTCATCCTCAC +
Preference number: 4 (lower is better)
Translates to: SGQNCPSIGLLQGSMAGRSGGPS*APAHPH
Trigger: GTGAGGATGAGCTGGGGCCCAGGAAGGCCCACCTGA...TCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGGACAGTTTTGACCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp CAGAGCTTCCTTCCTGGTGCTGAAGAGGTCAAAACTGTCTCCTCTAGGGGTCAGCGCCGTAGAATCAGGTaGGCCTTCCTGGGCCCCAGC +
Preference number: 4 (lower is better)
Translates to: QSFLPGAEEVKTVSSRGQRRRIR*AFLGPS
Trigger: GCTGGGGCCCAGGAAGGCCCACCTGATTCTACGGCG...CTGACCCCTAGAGGAGACAGTTTTGACCTCTTCAGCACCAGGAAGGAAGCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp CTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTGGCAGGAGGAGGCTGGAGCAGTaGCTACTCACCCTCTCCAGT +
Preference number: 4 (lower is better)
Translates to: LHRSPPGVHGRKKAECGRRRLEQ*LLTLSS
Trigger: ACTGGAGAGGGTGAGTAGCCACTGCTCCAGCCTCCT...CCTGCCACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp CTGTCCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTCTGCTCCCCCTCCCATaGAGAGTCTCTGTGCTCACG +
Preference number: 4 (lower is better)
Translates to: LSLHRSPPGVHGRKKAECLLPLP*RVSVLT
Trigger: CGTGAGCACAGAGACTCTCCATGGGAGGGGGAGCAG...ACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGGACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp GGCCTTGCTGGCAAGCTTCATCTGCTAGGCCCATCCTCAGCTGTCCCCCAGCCCTTGCTTTGGCCTTGCTaGCAAGCTTCATCTGCTAGG +
Preference number: 4 (lower is better)
Translates to: GLAGKLHLLGPSSAVPQPLLWPC*QASSAR
Trigger: CCTAGCAGATGAAGCTTGCCAGCAAGGCCAAAGCAA...GGGCTGGGGGACAGCTGAGGATGGGCCTAGCAGATGAAGCTTGCCAGCAAGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp GGCCTTGCTGGCAAGCTTCATCTGCTAGGCCCATCCTCAGCTGTCCCCCAGCCCAGAGCAAAGGCCGCTTaGTCTCCACCTGAAAACTTC +
Preference number: 4 (lower is better)
Translates to: GLAGKLHLLGPSSAVPQPRAKAA*SPPENF
Trigger: GAAGTTTTCAGGTGGAGACCAAGCGGCCTTTGCTCT...GGGCTGGGGGACAGCTGAGGATGGGCCTAGCAGATGAAGCTTGCCAGCAAGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp TGTCACCTAGGCTGGAGTCCAGTGGCTCCATGTCAGTTCACTGCAAACTCTGCCGGCCTGCAGGGACTCTaGGCAGACCCACAGGTAGCA +
Preference number: 4 (lower is better)
Translates to: CHLGWSPVAPCQFTANSAGLQGL*ADPQVA
Trigger: TGCTACCTGTGGGTCTGCCCAGAGTCCCTGCAGGCC...GGCAGAGTTTGCAGTGAACTGACATGGAGCCACTGGACTCCAGCCTAGGTGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313400.9
CDS-3UTR CCA 90 bp CCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTGGCAAGAGTGTGGGTCACCTaGCTGCCAAACTCGTCCTCG +
Preference number: 4 (lower is better)
Translates to: PSIGLLQGSMAGRKQSVARVWVT*LPNSSS
Trigger: CGAGGACGAGTTTGGCAGCCAGGTGACCCACACTCT...TGCCACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp TTGCTTTGGCCTTGCTGGCAAGCTTCATCTGCTAGGCCCATCCTCAGCTGTCCCTGTGCTGCGCAGGGGTaGTTGCAGCTGACCGATCTC +
Preference number: 4 (lower is better)
Translates to: LLWPCWQASSARPILSCPCAAQG*LQLTDL
Trigger: GAGATCGGTCAGCTGCAACCACCCCTGCGCAGCACA...GGGACAGCTGAGGATGGGCCTAGCAGATGAAGCTTGCCAGCAAGGCCAAAGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313400.9
ENST00000373986.7
CDS-3UTR CCA 90 bp ACAGGCCTGCAGGGACTCTGGGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCGTCATCTGGAAGACTTaGCCTTGGTTCACATGCTGG +
Preference number: 4 (lower is better)
Translates to: TGLQGLWADPQVAGRGRVVIWKT*PWFTCW
Trigger: CCAGCATGTGAACCAAGGCCAAGTCTTCCAGATGAC...GACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCCCAGAGTCCCTGCAGGCCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp GGCCTGCAGGGACTCTGGGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCCCATCCCTAAAGGTCATCTaGAAGACTTGGCCTTGGTTC +
Preference number: 4 (lower is better)
Translates to: GLQGLWADPQVAGRGRVPSLKVI*KTWPWF
Trigger: GAACCAAGGCCAAGTCTTCCAGATGACCTTTAGGGA...TGGGACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCCCAGAGTCCCTGCAGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR TCA 90 bp GGCCCCAGGATCCAGGAGAATACTGCTCCCCCTCCCATGGAGAGTCTCTGTGCTAATGAGCTGGTCATCTaGCAGCATCTGGGCTGTCAG +
Preference number: 4 (lower is better)
Translates to: GPRIQENTAPPPMESLCANELVI*QHLGCQ
Trigger: CTGACAGCCCAGATGCTGTCAGATGACCAGCTCATT...AGCACAGAGACTCTCCATGGGAGGGGGAGCAGTATTCTCCTGGATCCTGGGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR TCA 90 bp AGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTGGCAGGAAGAAGGTGGCACCACACGGTTaGTTTCCAGCAGCACTGGTG +
Preference number: 4 (lower is better)
Translates to: RSPPGVHGRKKAECGRKKVAPHG*FPAALV
Trigger: CACCAGTGCTGCTGGAAATCAACCGTGTGGTGCCAC...CTTCTTCCTGCCACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR TCA 90 bp CTGTCCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTGTGGCACCACACGGTTaGTTTCCAGCAGCACTGGTG +
Preference number: 4 (lower is better)
Translates to: LSLHRSPPGVHGRKKAECVAPHG*FPAALV
Trigger: CACCAGTGCTGCTGGAAATCAACCGTGTGGTGCCAC...ACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR TCA 90 bp GGCCTTGCTGGCAAGCTTCATCTGCTAGGCCCATCCTCAGCTGTCCCCCAGCCCTGCCATTGTCTTGGATaGGGGTATAAAGTGGCACCA +
Preference number: 4 (lower is better)
Translates to: GLAGKLHLLGPSSAVPQPCHCLG*GYKVAP
Trigger: TGGTGCCACTTTATACCCTCATCCAAGACAATGGCA...GGGCTGGGGGACAGCTGAGGATGGGCCTAGCAGATGAAGCTTGCCAGCAAGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR TCA 90 bp CTGCAGGGACTCTGGGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCCCACAATCATCAGTGCACTCTTaGAGGCCTCCTTTGTGCCAT +
Preference number: 4 (lower is better)
Translates to: LQGLWADPQVAGRGRVPQSSVHS*RPPLCH
Trigger: ATGGCACAAAGGAGGCCTTCAAGAGTGCACTGATGA...TTGTGGGACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCCCAGAGTCCCTGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR TCA 90 bp ACAGGCCTGCAGGGACTCTGGGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCCTTCTGCCTCGGGATTaGCAGCCATCCATAAGAAAA +
Preference number: 4 (lower is better)
Translates to: TGLQGLWADPQVAGRGRVLLPRD*QPSIRK
Trigger: TTTTCTTATGGATGGCTGTCAATCCCGAGGCAGAAG...GACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCCCAGAGTCCCTGCAGGCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR TCA 90 bp CTGCAGGGACTCTGGGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCCCACAACTTCCTTCCTGGTGCTaGAGAGGTCAAAACTGTCTC +
Preference number: 4 (lower is better)
Translates to: LQGLWADPQVAGRGRVPQLPSWC*RGQNCL
Trigger: GAGACAGTTTTGACCTCTTCAGCACCAGGAAGGAAG...TTGTGGGACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCCCAGAGTCCCTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR TCA 90 bp AGAAGAGCAAAGGCCGCTTGGTCTCCACCTGAAAACTTCTGCCTCGGGATTGACTTCATCGTCTGCCTCTaGGCCCGACGTCCCCTTGGC +
Preference number: 4 (lower is better)
Translates to: RRAKAAWSPPENFCLGIDFIVCL*ARRPLG
Trigger: GCCAAGGGGACGTCGGGCTCAGAGGCAGACGATGAA...GTCAATCCCGAGGCAGAAGTTTTCAGGTGGAGACCAAGCGGCCTTTGCTCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR TCA 90 bp GGCCCCAGGATCCAGGAGAATACTGCTCCCCCTCCCATGGAGAGTCTCTGTGCTGAGTCACCTTCACAGTaGGTGGACAAGACATCTGGC +
Preference number: 4 (lower is better)
Translates to: GPRIQENTAPPPMESLCAESPSQ*VDKTSG
Trigger: GCCAGATGTCTTGTCCACTCACTGTGAAGGTGACTC...AGCACAGAGACTCTCCATGGGAGGGGGAGCAGTATTCTCCTGGATCCTGGGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR TCA 90 bp CACAGGAGAAACCGTTTGCTTTGGCCTTGCTGGCAAGCTTCATCTGCTAGGCCCGATGCAGGTGAGCTCTaGGCCATAGAGGGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: HRRNRLLWPCWQASSARPDAGEL*AIEGLC
Trigger: GCAGAGGCCCTCTATGGCTCAGAGCTCACCTGCATC...GGGCCTAGCAGATGAAGCTTGCCAGCAAGGCCAAAGCAAACGGTTTCTCCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR TCA 90 bp CTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTGGCAGGCCAAGTAGCTGGGATTaGTTACAGGCACGTGCCACC +
Preference number: 4 (lower is better)
Translates to: LHRSPPGVHGRKKAECGRPSSWD*LQARAT
Trigger: GGTGGCACGTGCCTGTAATCAATCCCAGCTACTTGG...CCTGCCACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313400.9
CDS-3UTR GCA 90 bp GGTCTCCACCTGAAAACTTCTGCCTCGGGATTGACAGCCATCCATAAGAAAAGGAGGAAAGCTCACCCCTaGAGGGCCGCCTTGCCCCGC +
Preference number: 4 (lower is better)
Translates to: GLHLKTSASGLTAIHKKRRKAHP*RAALPR
Trigger: GCGGGGCAAGGCGGCCCTGCAGGGGTGAGCTTTCCT...CCTTTTCTTATGGATGGCTGTCAATCCCGAGGCAGAAGTTTTCAGGTGGAGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000288520.9
ENST00000341734.8
CDS-3UTR GCA 90 bp ATCCACAGGAGAAACCGTTTGCTTTGGCCTTGCTGGCAAGCTTCATCTGCTAGGGGCTCAGCTGCTCCTTaGCTGGCCGGCGGCAAAGGT +
Preference number: 4 (lower is better)
Translates to: IHRRNRLLWPCWQASSARGSAAP*LAGGKG
Trigger: ACCTTTGCCGCCGGCCAGGCAAGGAGCAGCTGAGCC...CCTAGCAGATGAAGCTTGCCAGCAAGGCCAAAGCAAACGGTTTCTCCTGTGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp AGAAGAGCAAAGGCCGCTTGGTCTCCACCTGAAAACTTCTGCCTCGGGATTGACGCTGCAGAAGGGGGCTaGAGTTGGGGAGCCCATTGG +
Preference number: 4 (lower is better)
Translates to: RRAKAAWSPPENFCLGIDAAEGG*SWGAHW
Trigger: CCAATGGGCTCCCCAACTGCAGCCCCCTTCTGCAGC...GTCAATCCCGAGGCAGAAGTTTTCAGGTGGAGACCAAGCGGCCTTTGCTCTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp CACAGGAGAAACCGTTTGCTTTGGCCTTGCTGGCAAGCTTCATCTGCTAGGCCCATACCACACCATGCCTaGAGGCCGGACCTCCTCGCT +
Preference number: 4 (lower is better)
Translates to: HRRNRLLWPCWQASSARPIPHHA*RPDLLA
Trigger: AGCGAGGAGGTCCGGCCTGCAGGCATGGTGTGGTAT...GGGCCTAGCAGATGAAGCTTGCCAGCAAGGCCAAAGCAAACGGTTTCTCCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp GGGTCAGGTCAAAACTGTCCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGACATGGAGAGTCTCTGTaGTCACGGAGGGCAATACCC +
Preference number: 4 (lower is better)
Translates to: GSGQNCPSIGLLQGSMAGHGESL*SRRAIP
Trigger: GGGTATTGCCCTCCGTGAGCACAGAGACTCTCCATG...TCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGGACAGTTTTGACCTGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp CACAGGAGAAACCGTTTGCTTTGGCCTTGCTGGCAAGCTTCATCTGCTAGGCCCATGCATGGACAGGCCTaGAGGGACTCTGGGCAGACC +
Preference number: 4 (lower is better)
Translates to: HRRNRLLWPCWQASSARPMHGQA*RDSGQT
Trigger: GGTCTGCCCAGAGTCCCTGCAGGCCTGTCCATGCAT...GGGCCTAGCAGATGAAGCTTGCCAGCAAGGCCAAAGCAAACGGTTTCTCCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp GCAAAGGCCGCTTGGTCTCCACCTGAAAACTTCTGCCTCGGGATTGACAGCCATCCAGCTGCCCGGAGCTaGTCATGGAGACGTGGAAGT +
Preference number: 4 (lower is better)
Translates to: AKAAWSPPENFCLGIDSHPAARS*SWRRGS
Trigger: ACTTCCACGTCTCCATGAGCAGCTCCGGGCAGCTGG...ATGGCTGTCAATCCCGAGGCAGAAGTTTTCAGGTGGAGACCAAGCGGCCTTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313400.9
ENST00000361209.6
CDS-3UTR GCA 90 bp CTGTCCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTAGTGGCTTCTGTGCTTaGGCTCTTCTGGGGGATGCG +
Preference number: 4 (lower is better)
Translates to: LSLHRSPPGVHGRKKAECSGFCA*ALLGDA
Trigger: CGCATCCCCCAGAAGAGCGCAAGCACAGAAGCCACT...ACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGGACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313400.9
ENST00000361209.6
CDS-3UTR GCA 90 bp AGAAGAGCAAAGGCCGCTTGGTCTCCACCTGAAAACTTCTGCCTCGGGATTGACTGTGGGTCACCTGGCTaGCAAACTCGTCCTCGCGGG +
Preference number: 4 (lower is better)
Translates to: RRAKAAWSPPENFCLGIDCGSPG*QTRPRG
Trigger: CCCGCGAGGACGAGTTTGGCAGCCAGGTGACCCACA...GTCAATCCCGAGGCAGAAGTTTTCAGGTGGAGACCAAGCGGCCTTTGCTCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp AAACTGTCCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTCTTCCCTGCCGATGTaGTGCGCAGGGGTGGTTGCA +
Preference number: 4 (lower is better)
Translates to: KLSLHRSPPGVHGRKKAESSLPM*CAGVVA
Trigger: TGCAACCACCCCTGCGCAGCACATCGGCAGGGAAGA...CTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGGACAGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313400.9
ENST00000373986.7
CDS-3UTR GCA 90 bp TGTCCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTGTCAGCAAACCTTTGCTaGGGCGGCGACTGCGGTACT +
Preference number: 4 (lower is better)
Translates to: CPSIGLLQGSMAGRKQSVSANLC*GGDCGT
Trigger: AGTACCGCAGTCGCCGCCGCAGCAAAGGTTTGCTGA...CACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp CTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTGGCAGGTTTTCAGCAAACCTTTaGTGCGGCGGCGACTGCGGT +
Preference number: 4 (lower is better)
Translates to: LHRSPPGVHGRKKAECGRFSANL*CGGDCG
Trigger: ACCGCAGTCGCCGCCGCAGCAAAGGTTTGCTGAAAA...CCTGCCACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp AGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTGGCAGGAAGAAGTCTGGGTCGCAGAGCTaGTCACAGGCATCTGTCGTC +
Preference number: 4 (lower is better)
Translates to: RSPPGVHGRKKAECGRKKSGSQS*SQASVV
Trigger: GACGACAGATGCCTGTGAGCAGCTCTGCGACCCAGA...CTTCTTCCTGCCACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp CACAGGAGAAACCGTTTGCTTTGGCCTTGCTGGCAAGCTTCATCTGCTAGGCCCTCACACGGTAGAGGTTaGTCCGGACCCGCCACTGCT +
Preference number: 4 (lower is better)
Translates to: HRRNRLLWPCWQASSARPSHGRG*SGPATA
Trigger: AGCAGTGGCGGGTCCGGAGCAACCTCTACCGTGTGA...GGGCCTAGCAGATGAAGCTTGCCAGCAAGGCCAAAGCAAACGGTTTCTCCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp AGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTGGCAGGAAGAAGTGGAGCCACAGCTGCTaGTGGACCTTCTTGCTGGGA +
Preference number: 4 (lower is better)
Translates to: RSPPGVHGRKKAECGRKKWSHSC*WTFLLG
Trigger: TCCCAGCAAGAAGGTCCAGCAGCAGCTGTGGCTCCA...CTTCTTCCTGCCACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp TTGCTTTGGCCTTGCTGGCAAGCTTCATCTGCTAGGCCCATCCTCAGCTGTCCCTGGAGCCACAGCTGCTaGTGGACCTTCTTGCTGGGA +
Preference number: 4 (lower is better)
Translates to: LLWPCWQASSARPILSCPWSHSC*WTFLLG
Trigger: TCCCAGCAAGAAGGTCCAGCAGCAGCTGTGGCTCCA...GGGACAGCTGAGGATGGGCCTAGCAGATGAAGCTTGCCAGCAAGGCCAAAGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp CTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTGGCAGGAAGGTGACAGGTAGATaGACAGCGCCCCTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: LHRSPPGVHGRKKAECGRKVTGR*TAPLLL
Trigger: GAGGAGAAGGGGCGCTGTCCATCTACCTGTCACCTT...CCTGCCACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp AGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTGGCAGGAAGAAGGATTTCCAGCAGCACTaGTGTGGGGCTCAGCTGCTC +
Preference number: 4 (lower is better)
Translates to: RSPPGVHGRKKAECGRKKDFQQH*CGAQLL
Trigger: GAGCAGCTGAGCCCCACACCAGTGCTGCTGGAAATC...CTTCTTCCTGCCACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp GGCCTGCAGGGACTCTGGGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCCCAGATGAGGGTATAAAGTaGCACCACACGGTTGATTTC +
Preference number: 4 (lower is better)
Translates to: GLQGLWADPQVAGRGRVPDEGIK*HHTVDF
Trigger: GAAATCAACCGTGTGGTGCCACTTTATACCCTCATC...TGGGACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCCCAGAGTCCCTGCAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp TTGCTTTGGCCTTGCTGGCAAGCTTCATCTGCTAGGCCCATCCTCAGCTGTCCCGAAGGGGGCTGCAGTTaGGGAGCCCATTGGCATCAA +
Preference number: 4 (lower is better)
Translates to: LLWPCWQASSARPILSCPEGGCS*GAHWHQ
Trigger: TTGATGCCAATGGGCTCCCCAACTGCAGCCCCCTTC...GGGACAGCTGAGGATGGGCCTAGCAGATGAAGCTTGCCAGCAAGGCCAAAGCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp CTCAGAGCTTCCTTCCTGGTGCTGAAGAGGTCAAAACTGTCTCCTCTAGGGGTCCACTCCGCAGGAGGCTaGAGCAGTGGCTACTCACCC +
Preference number: 4 (lower is better)
Translates to: LRASFLVLKRSKLSPLGVHSAGG*SSGYSP
Trigger: GGGTGAGTAGCCACTGCTCCAGCCTCCTGCGGAGTG...GACCCCTAGAGGAGACAGTTTTGACCTCTTCAGCACCAGGAAGGAAGCTCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp TGTCACCTAGGCTGGAGTCCAGTGGCTCCATGTCAGTTCACTGCAAACTCTGCCCTGCTCCCCCTCCCATaGAGAGTCTCTGTGCTCACG +
Preference number: 4 (lower is better)
Translates to: CHLGWSPVAPCQFTANSALLPLP*RVSVLT
Trigger: CGTGAGCACAGAGACTCTCCATGGGAGGGGGAGCAG...GGCAGAGTTTGCAGTGAACTGACATGGAGCCACTGGACTCCAGCCTAGGTGACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000313400.9
CDS-3UTR CCA 90 bp GGCCTTGCTGGCAAGCTTCATCTGCTAGGCCCATCCTCAGCTGTCCCCCAGCCCAGAAACCGTTTGCTTTaGCCTTGCTGGCAAGCTTCA +
Preference number: 4 (lower is better)
Translates to: GLAGKLHLLGPSSAVPQPRNRLL*PCWQAS
Trigger: TGAAGCTTGCCAGCAAGGCCAAAGCAAACGGTTTCT...GGGCTGGGGGACAGCTGAGGATGGGCCTAGCAGATGAAGCTTGCCAGCAAGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp CCTCAGAGCTTCCTTCCTGGTGCTGAAGAGGTCAAAACTGTCTCCTCTAGGGGTGGCCTGCAGGGACTCTaGGCAGACCCACAGGTAGCA +
Preference number: 4 (lower is better)
Translates to: PQSFLPGAEEVKTVSSRGGLQGL*ADPQVA
Trigger: TGCTACCTGTGGGTCTGCCCAGAGTCCCTGCAGGCC...ACCCCTAGAGGAGACAGTTTTGACCTCTTCAGCACCAGGAAGGAAGCTCTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp CAGAGCTTCCTTCCTGGTGCTGAAGAGGTCAAAACTGTCTCCTCTAGGGGTCAGGGCCTGCAGGGACTCTaGGCAGACCCACAGGTAGCA +
Preference number: 4 (lower is better)
Translates to: QSFLPGAEEVKTVSSRGQGLQGL*ADPQVA
Trigger: TGCTACCTGTGGGTCTGCCCAGAGTCCCTGCAGGCC...CTGACCCCTAGAGGAGACAGTTTTGACCTCTTCAGCACCAGGAAGGAAGCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp GGCCTTGCTGGCAAGCTTCATCTGCTAGGCCCATCCTCAGCTGTCCCCCAGCCCGGAATTTTTAATGCATaGACAGGCCTGCAGGGACTC +
Preference number: 4 (lower is better)
Translates to: GLAGKLHLLGPSSAVPQPGIFNA*TGLQGL
Trigger: GAGTCCCTGCAGGCCTGTCCATGCATTAAAAATTCC...GGGCTGGGGGACAGCTGAGGATGGGCCTAGCAGATGAAGCTTGCCAGCAAGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp ACAGGCCTGCAGGGACTCTGGGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCGGAATTTTTAATGCATaGACAGGCCTGCAGGGACTC +
Preference number: 4 (lower is better)
Translates to: TGLQGLWADPQVAGRGRVGIFNA*TGLQGL
Trigger: GAGTCCCTGCAGGCCTGTCCATGCATTAAAAATTCC...GACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCCCAGAGTCCCTGCAGGCCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp AGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTGGCAGGAAGAAGGCCCGGAGCTGCTCATaGAGACGTGGAAGTACAAGG +
Preference number: 4 (lower is better)
Translates to: RSPPGVHGRKKAECGRKKARSCS*RRGSTR
Trigger: CCTTGTACTTCCACGTCTCCATGAGCAGCTCCGGGC...CTTCTTCCTGCCACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313400.9
ENST00000361209.6
CDS-3UTR CCA 90 bp CCTCAGAGCTTCCTTCCTGGTGCTGAAGAGGTCAAAACTGTCTCCTCTAGGGGTAAGCTCTCCCGCGCCTaGGGACCCAGCAGCACAGAT +
Preference number: 4 (lower is better)
Translates to: PQSFLPGAEEVKTVSSRGKLSRA*GPSSTD
Trigger: ATCTGTGCTGCTGGGTCCCCAGGCGCGGGAGAGCTT...ACCCCTAGAGGAGACAGTTTTGACCTCTTCAGCACCAGGAAGGAAGCTCTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313400.9
ENST00000361209.6
CDS-3UTR CCA 90 bp TGTCACCTAGGCTGGAGTCCAGTGGCTCCATGTCAGTTCACTGCAAACTCTGCCGTTGGCCCGCCTAGGTaGCTCCTCATCCTCCTCACA +
Preference number: 4 (lower is better)
Translates to: CHLGWSPVAPCQFTANSAVGPPR*LLILLT
Trigger: TGTGAGGAGGATGAGGAGCCACCTAGGCGGGCCAAC...GGCAGAGTTTGCAGTGAACTGACATGGAGCCACTGGACTCCAGCCTAGGTGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313400.9
CDS-3UTR CCA 90 bp CACAGGAGAAACCGTTTGCTTTGGCCTTGCTGGCAAGCTTCATCTGCTAGGCCCGTTGGCCCGCCTAGGTaGCTCCTCATCCTCCTCACA +
Preference number: 4 (lower is better)
Translates to: HRRNRLLWPCWQASSARPVGPPR*LLILLT
Trigger: TGTGAGGAGGATGAGGAGCCACCTAGGCGGGCCAAC...GGGCCTAGCAGATGAAGCTTGCCAGCAAGGCCAAAGCAAACGGTTTCTCCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp ATCCACAGGAGAAACCGTTTGCTTTGGCCTTGCTGGCAAGCTTCATCTGCTAGGTCCTCGCGGGAGACATaGTTGGCCCGCCTAGGTGGC +
Preference number: 4 (lower is better)
Translates to: IHRRNRLLWPCWQASSARSSRET*LARLGG
Trigger: GCCACCTAGGCGGGCCAACCATGTCTCCCGCGAGGA...CCTAGCAGATGAAGCTTGCCAGCAAGGCCAAAGCAAACGGTTTCTCCTGTGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp CTGTCCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTGAGGTCCCTCACCCATaGGGAGGTGGCATTGATCTG +
Preference number: 4 (lower is better)
Translates to: LSLHRSPPGVHGRKKAECEVPHP*GGGIDL
Trigger: CAGATCAATGCCACCTCCCCATGGGTGAGGGACCTC...ACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp AGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTGGCAGGAAGAAGGAGGTCCCTCACCCATaGGGAGGTGGCATTGATCTG +
Preference number: 4 (lower is better)
Translates to: RSPPGVHGRKKAECGRKKEVPHP*GGGIDL
Trigger: CAGATCAATGCCACCTCCCCATGGGTGAGGGACCTC...CTTCTTCCTGCCACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp CCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTGGCAAGAGCAGTCACGAACTaGCCCGAAGGAAGACAGCAG +
Preference number: 4 (lower is better)
Translates to: PSIGLLQGSMAGRKQSVARAVTN*PEGRQQ
Trigger: CTGCTGTCTTCCTTCGGGCCAGTTCGTGACTGCTCT...TGCCACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp AGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTGGCAGGAAGAAGAGATGGTGCTCGAAGTaGCATCGTAGGGCAGGGGCA +
Preference number: 4 (lower is better)
Translates to: RSPPGVHGRKKAECGRKKRWCSK*HRRAGA
Trigger: TGCCCCTGCCCTACGATGCCACTTCGAGCACCATCT...CTTCTTCCTGCCACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp AAACTGTCCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGGAGCAGTTGGAGGTCTaGAAGGGGCTCGGAGAGGAC +
Preference number: 4 (lower is better)
Translates to: KLSLHRSPPGVHGRKKAEEQLEV*KGLGED
Trigger: GTCCTCTCCGAGCCCCTTCCAGACCTCCAACTGCTC...CTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGGACAGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp TTGCTTTGGCCTTGCTGGCAAGCTTCATCTGCTAGGCCCATCCTCAGCTGTCCCTCTCCAGTGAGCAGTTaGAGGTCTGGAAGGGGCTCG +
Preference number: 4 (lower is better)
Translates to: LLWPCWQASSARPILSCPSPVSS*RSGRGS
Trigger: CGAGCCCCTTCCAGACCTCCAACTGCTCACTGGAGA...GGGACAGCTGAGGATGGGCCTAGCAGATGAAGCTTGCCAGCAAGGCCAAAGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp GGCCCCAGGATCCAGGAGAATACTGCTCCCCCTCCCATGGAGAGTCTCTGTGCTAGCTCTCTGAAAACTTaGGACCCAGGCCCAGCAAAC +
Preference number: 4 (lower is better)
Translates to: GPRIQENTAPPPMESLCASSLKT*DPGPAN
Trigger: GTTTGCTGGGCCTGGGTCCCAAGTTTTCAGAGAGCT...AGCACAGAGACTCTCCATGGGAGGGGGAGCAGTATTCTCCTGGATCCTGGGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000313400.9
CDS-3UTR TCA 90 bp CCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTGGCAAATGAGCTGGTCATCTaGCAGCATCTGGGCTGTCAG +
Preference number: 4 (lower is better)
Translates to: PSIGLLQGSMAGRKQSVANELVI*QHLGCQ
Trigger: CTGACAGCCCAGATGCTGTCAGATGACCAGCTCATT...TGCCACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR TCA 90 bp AGAGAAGTCCTTAAAGACCCATGCTTCCTCACTGCAACCATCCTCAGAGCTTCCGGCCGGCGGCAAAGGTaGCAGGTAGATGGACAGCGC +
Preference number: 4 (lower is better)
Translates to: REVLKDPCFLTATILRASGRRQR*QVDGQR
Trigger: GCGCTGTCCATCTACCTGTCACCTTTGCCGCCGGCC...GGAAGCTCTGAGGATGGTTGCAGTGAGGAAGCATGGGTCTTTAAGGACTTCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR TCA 90 bp GGCCCCAGGATCCAGGAGAATACTGCTCCCCCTCCCATGGAGAGTCTCTGTGCTTCATCAGTGCACTCTTaGAGGCCTCCTTTGTGCCAT +
Preference number: 4 (lower is better)
Translates to: GPRIQENTAPPPMESLCASSVHS*RPPLCH
Trigger: ATGGCACAAAGGAGGCCTTCAAGAGTGCACTGATGA...AGCACAGAGACTCTCCATGGGAGGGGGAGCAGTATTCTCCTGGATCCTGGGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR TCA 90 bp GGGCCAGAAAGCGGCAGAGCCCAGGGTTGCACAGTGAGCTTATTAGCAGCACCAGAACAGCATCGAGGCTaGGACCTCCATCAGTGTGTT +
Preference number: 4 (lower is better)
Translates to: GPESGRAQGCTVSLLAAPEQHRG*DLHQCV
Trigger: AACACACTGATGGAGGTCTCAGCCTCGATGCTGTTC...TGGTGCTGCTAATAAGCTCACTGTGCAACCCTGGGCTCTGCCGCTTTCTGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417725.1
CDS-3UTR TCA 90 bp GGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCCCACAAACTCAATAATGTCCCAGACATCTCCAGGGTaGAGAAGGGCAGCTCGGTGT +
Preference number: 4 (lower is better)
Translates to: GRPTGSRKRQGPTNSIMSQTSPG*RRAARC
Trigger: ACACCGAGCTGCCCTTCTTCACCCTGGAGATGTCTG...GGACATTATTGAGTTTGTGGGACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313400.9
ENST00000361209.6
CDS-3UTR TCA 90 bp TGTCCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTGGGATGGGCACGCCAATaGCGGAATTGTGGGTTTGCA +
Preference number: 4 (lower is better)
Translates to: CPSIGLLQGSMAGRKQSVGWARQ*RNCGFA
Trigger: TGCAAACCCACAATTCCGTCATTGGCGTGCCCATCC...CACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313400.9
ENST00000361209.6
CDS-3UTR TCA 90 bp TTGCTTTGGCCTTGCTGGCAAGCTTCATCTGCTAGGCCCATCCTCAGCTGTCCCTGGCTCTCCCAAAGCTaGTTCCTCCTCGAGACTTGC +
Preference number: 4 (lower is better)
Translates to: LLWPCWQASSARPILSCPWLSQS*FLLETC
Trigger: GCAAGTCTCGAGGAGGAATCAGCTTTGGGAGAGCCA...GGGACAGCTGAGGATGGGCCTAGCAGATGAAGCTTGCCAGCAAGGCCAAAGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313400.9
ENST00000373986.7
CDS-3UTR TCA 90 bp AGAGAAGTCCTTAAAGACCCATGCTTCCTCACTGCAACCATCCTCAGAGCTTCCAGCTGGCCAGGGGGTTaGTGGACAGCTCCACAGGCG +
Preference number: 4 (lower is better)
Translates to: REVLKDPCFLTATILRASSWPGG*WTAPQA
Trigger: CGCCTGTGGAGCTGTCCATCAACCCCCTGGCCAGCT...GGAAGCTCTGAGGATGGTTGCAGTGAGGAAGCATGGGTCTTTAAGGACTTCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR TCA 90 bp TCAGGTCAAAACTGTCCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAATTTGGAGTCAGGTTTaGGGCACTTGGGGCCCTCGC +
Preference number: 4 (lower is better)
Translates to: SGQNCPSIGLLQGSMAGRIWSQV*GTWGPR
Trigger: GCGAGGGCCCCAAGTGCCTCAAACCTGACTCCAAAT...TCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGGACAGTTTTGACCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR TCA 90 bp CACAGGAGAAACCGTTTGCTTTGGCCTTGCTGGCAAGCTTCATCTGCTAGGCCCATTTGGAGTCAGGTTTaGGGCACTTGGGGCCCTCGC +
Preference number: 4 (lower is better)
Translates to: HRRNRLLWPCWQASSARPIWSQV*GTWGPR
Trigger: GCGAGGGCCCCAAGTGCCTCAAACCTGACTCCAAAT...GGGCCTAGCAGATGAAGCTTGCCAGCAAGGCCAAAGCAAACGGTTTCTCCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR TCA 90 bp GGCCTTGCTGGCAAGCTTCATCTGCTAGGCCCATCCTCAGCTGTCCCCCAGCCCAGGAAGTGGTATACATaGGAGGCATTTAGAAGCTCC +
Preference number: 4 (lower is better)
Translates to: GLAGKLHLLGPSSAVPQPRKWYT*EAFRSS
Trigger: GGAGCTTCTAAATGCCTCTCATGTATACCACTTCCT...GGGCTGGGGGACAGCTGAGGATGGGCCTAGCAGATGAAGCTTGCCAGCAAGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000313400.9
CDS-3UTR TCA 90 bp AGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTGGCAGGAAGAAGCCAGCTCTGTGGTCTTaGGTGAACTTGAGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: RSPPGVHGRKKAECGRKKPALWS*VNLSRS
Trigger: GGACCTGCTCAAGTTCACTCAAGACCACAGAGCTGG...CTTCTTCCTGCCACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341734.8
CDS-3UTR TCA 90 bp GGGCCAGAAAGCGGCAGAGCCCAGGGTTGCACAGTGAGCTTATTAGCAGCACCATCCAGGAGACATTACTaGGTGGATTGCCTGGCCTCT +
Preference number: 4 (lower is better)
Translates to: GPESGRAQGCTVSLLAAPSRRHY*VDCLAS
Trigger: AGAGGCCAGGCAATCCACTCAGTAATGTCTCCTGGA...TGGTGCTGCTAATAAGCTCACTGTGCAACCCTGGGCTCTGCCGCTTTCTGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417725.1
CDS-3UTR GCA 90 bp GGCCCCAGGATCCAGGAGAATACTGCTCCCCCTCCCATGGAGAGTCTCTGTGCTCTGCTACACAAGATGTaGCCAGGCCAGAGAGTAAGT +
Preference number: 4 (lower is better)
Translates to: GPRIQENTAPPPMESLCALLHKM*PGQRVS
Trigger: ACTTACTCTCTGGCCTGGGCACATCTTGTGTAGCAG...AGCACAGAGACTCTCCATGGGAGGGGGAGCAGTATTCTCCTGGATCCTGGGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp CTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTGGCAGGGTGCTTAGCTCTGAGTaGCTCCCTCGTGTATCCACA +
Preference number: 4 (lower is better)
Translates to: LHRSPPGVHGRKKAECGRVLSSE*LPRVST
Trigger: TGTGGATACACGAGGGAGGCACTCAGAGCTAAGCAC...CCTGCCACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp CCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTGGCAGTGCTTAGCTCTGAGTaGCTCCCTCGTGTATCCACA +
Preference number: 4 (lower is better)
Translates to: PSIGLLQGSMAGRKQSVAVLSSE*LPRVST
Trigger: TGTGGATACACGAGGGAGGCACTCAGAGCTAAGCAC...TGCCACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp GGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCCCACAAACTCAATAATGTCCTCCTCAGGGTCACCGTaGTTAGCTCTGAGTGCCTCC +
Preference number: 4 (lower is better)
Translates to: GRPTGSRKRQGPTNSIMSSSGSP*LALSAS
Trigger: GGAGGCACTCAGAGCTAAGCACGGTGACCCTGAGGA...GGACATTATTGAGTTTGTGGGACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp GCAAAGGCCGCTTGGTCTCCACCTGAAAACTTCTGCCTCGGGATTGACAGCCATTCCTCAGGGTCACCGTaGTTAGCTCTGAGTGCCTCC +
Preference number: 4 (lower is better)
Translates to: AKAAWSPPENFCLGIDSHSSGSP*LALSAS
Trigger: GGAGGCACTCAGAGCTAAGCACGGTGACCCTGAGGA...ATGGCTGTCAATCCCGAGGCAGAAGTTTTCAGGTGGAGACCAAGCGGCCTTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp AGAAGAGCAAAGGCCGCTTGGTCTCCACCTGAAAACTTCTGCCTCGGGATTGACGCCGGACCTCCTCGCTaGGGCAGAAAAGATAGGGCA +
Preference number: 4 (lower is better)
Translates to: RRAKAAWSPPENFCLGIDAGPPR*GRKDRA
Trigger: TGCCCTATCTTTTCTGCCGCAGCGAGGAGGTCCGGC...GTCAATCCCGAGGCAGAAGTTTTCAGGTGGAGACCAAGCGGCCTTTGCTCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp CAGAGCTTCCTTCCTGGTGCTGAAGAGGTCAAAACTGTCTCCTCTAGGGGTCAGATACCACACCATGCCTaGAGGCCGGACCTCCTCGCT +
Preference number: 4 (lower is better)
Translates to: QSFLPGAEEVKTVSSRGQIPHHA*RPDLLA
Trigger: AGCGAGGAGGTCCGGCCTGCAGGCATGGTGTGGTAT...CTGACCCCTAGAGGAGACAGTTTTGACCTCTTCAGCACCAGGAAGGAAGCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp CCTCAGAGCTTCCTTCCTGGTGCTGAAGAGGTCAAAACTGTCTCCTCTAGGGGTATACCACACCATGCCTaGAGGCCGGACCTCCTCGCT +
Preference number: 4 (lower is better)
Translates to: PQSFLPGAEEVKTVSSRGIPHHA*RPDLLA
Trigger: AGCGAGGAGGTCCGGCCTGCAGGCATGGTGTGGTAT...ACCCCTAGAGGAGACAGTTTTGACCTCTTCAGCACCAGGAAGGAAGCTCTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp CAAAGGCCGCTTGGTCTCCACCTGAAAACTTCTGCCTCGGGATTGACAGCCATCTGCTATACCACACCATaGCTGCAGGCCGGACCTCCT +
Preference number: 4 (lower is better)
Translates to: QRPLGLHLKTSASGLTAICYTTP*LQAGPP
Trigger: AGGAGGTCCGGCCTGCAGGCATGGTGTGGTATAGCA...GATGGCTGTCAATCCCGAGGCAGAAGTTTTCAGGTGGAGACCAAGCGGCCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp GCAAAGGCCGCTTGGTCTCCACCTGAAAACTTCTGCCTCGGGATTGACAGCCATTGCTATACCACACCATaGCTGCAGGCCGGACCTCCT +
Preference number: 4 (lower is better)
Translates to: AKAAWSPPENFCLGIDSHCYTTP*LQAGPP
Trigger: AGGAGGTCCGGCCTGCAGGCATGGTGTGGTATAGCA...ATGGCTGTCAATCCCGAGGCAGAAGTTTTCAGGTGGAGACCAAGCGGCCTTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp TTGCTTTGGCCTTGCTGGCAAGCTTCATCTGCTAGGCCCATCCTCAGCTGTCCCCATGGAGAGTCTCTGTaGTCACGGAGGGCAATACCC +
Preference number: 4 (lower is better)
Translates to: LLWPCWQASSARPILSCPHGESL*SRRAIP
Trigger: GGGTATTGCCCTCCGTGAGCACAGAGACTCTCCATG...GGGACAGCTGAGGATGGGCCTAGCAGATGAAGCTTGCCAGCAAGGCCAAAGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp CAGGGACTCTGGGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCCCACAAACTCGTTTGCTTTGGCCTTaGTGGCAAGCTTCATCTGCT +
Preference number: 4 (lower is better)
Translates to: QGLWADPQVAGRGRVPQTRLLWP*WQASSA
Trigger: AGCAGATGAAGCTTGCCAGCAAGGCCAAAGCAAACG...AGTTTGTGGGACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCCCAGAGTCCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp AGGAGAAACCGTTTGCTTTGGCCTTGCTGGCAAGCTTCATCTGCTAGGCCCATCATGCATGGACAGGCCTaGAGGGACTCTGGGCAGACC +
Preference number: 4 (lower is better)
Translates to: RRNRLLWPCWQASSARPIMHGQA*RDSGQT
Trigger: GGTCTGCCCAGAGTCCCTGCAGGCCTGTCCATGCAT...GATGGGCCTAGCAGATGAAGCTTGCCAGCAAGGCCAAAGCAAACGGTTTCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp GGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCCCACAAACTCAATAATGTCCCACTGCTGTCTCCAGTaGACCAGCGAGATGTCCGCT +
Preference number: 4 (lower is better)
Translates to: GRPTGSRKRQGPTNSIMSHCCLQ*TSEMSA
Trigger: AGCGGACATCTCGCTGGTGCACTGGAGACAGCAGTG...GGACATTATTGAGTTTGTGGGACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313400.9
ENST00000361209.6
CDS-3UTR GCA 90 bp CCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTGGCACGTGGAAGTACAAGGTaGCATTCTCCAGCCACTGCT +
Preference number: 4 (lower is better)
Translates to: PSIGLLQGSMAGRKQSVARGSTR*HSPATA
Trigger: AGCAGTGGCTGGAGAATGGCACCTTGTACTTCCACG...TGCCACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313400.9
ENST00000361209.6
CDS-3UTR GCA 90 bp ACAGGCCTGCAGGGACTCTGGGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCGAAATGTGGAGGATGTaGATCTGCTCCTCAACAATC +
Preference number: 4 (lower is better)
Translates to: TGLQGLWADPQVAGRGRVEMWRM*ICSSTI
Trigger: GATTGTTGAGGAGCAGATGCACATCCTCCACATTTC...GACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCCCAGAGTCCCTGCAGGCCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313400.9
ENST00000361209.6
CDS-3UTR GCA 90 bp AAACTGTCTCCTCTAGGGGTCAGGTCAAAACTGTCCCTCCATAGGTCTCCTCCAATGCGGCGACGCTTCTaGCAACGTCGCTGGGCGTAC +
Preference number: 4 (lower is better)
Translates to: KLSPLGVRSKLSLHRSPPMRRRF*QRRWAY
Trigger: GTACGCCCAGCGACGTTGGCAGAAGCGTCGCCGCAT...TGGAGGAGACCTATGGAGGGACAGTTTTGACCTGACCCCTAGAGGAGACAGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313400.9
ENST00000361209.6
CDS-3UTR GCA 90 bp ATCCACAGGAGAAACCGTTTGCTTTGGCCTTGCTGGCAAGCTTCATCTGCTAGGTGTGGGTCACCTGGCTaGCAAACTCGTCCTCGCGGG +
Preference number: 4 (lower is better)
Translates to: IHRRNRLLWPCWQASSARCGSPG*QTRPRG
Trigger: CCCGCGAGGACGAGTTTGGCAGCCAGGTGACCCACA...CCTAGCAGATGAAGCTTGCCAGCAAGGCCAAAGCAAACGGTTTCTCCTGTGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp TGTCCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTGTTTTCAGCAAACCTTTaGTGCGGCGGCGACTGCGGT +
Preference number: 4 (lower is better)
Translates to: CPSIGLLQGSMAGRKQSVFSANL*CGGDCG
Trigger: ACCGCAGTCGCCGCCGCAGCAAAGGTTTGCTGAAAA...CACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp CTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTGGCAGGCCATCTGCTATGAAGTaGTCGGGCACATGCAGAGTC +
Preference number: 4 (lower is better)
Translates to: LHRSPPGVHGRKKAECGRPSAMK*SGTCRV
Trigger: GACTCTGCATGTGCCCGAGCACTTCATAGCAGATGG...CCTGCCACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp AAACTGTCCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTCTGGGTCGCAGAGCTaGTCACAGGCATCTGTCGTC +
Preference number: 4 (lower is better)
Translates to: KLSLHRSPPGVHGRKKAESGSQS*SQASVV
Trigger: GACGACAGATGCCTGTGAGCAGCTCTGCGACCCAGA...CTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGGACAGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp CTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTGGCAGGAGCCTTCATGACAGCTaGACTCTCCGGTTTCTGGGT +
Preference number: 4 (lower is better)
Translates to: LHRSPPGVHGRKKAECGRSLHDS*TLRFLG
Trigger: ACCCAGAAACCGGAGAGTGCAGCTGTCATGAAGGCT...CCTGCCACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp GCAAAGGCCGCTTGGTCTCCACCTGAAAACTTCTGCCTCGGGATTGACAGCCATCCCGAGGAATCCACCTaGCGGTCAGACACACACTTG +
Preference number: 4 (lower is better)
Translates to: AKAAWSPPENFCLGIDSHPEEST*RSDTHL
Trigger: CAAGTGTGTGTCTGACCGGCAGGTGGATTCCTCGGG...ATGGCTGTCAATCCCGAGGCAGAAGTTTTCAGGTGGAGACCAAGCGGCCTTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp CAGAGCTTCCTTCCTGGTGCTGAAGAGGTCAAAACTGTCTCCTCTAGGGGTCAGTCACACGGTAGAGGTTaGTCCGGACCCGCCACTGCT +
Preference number: 4 (lower is better)
Translates to: QSFLPGAEEVKTVSSRGQSHGRG*SGPATA
Trigger: AGCAGTGGCGGGTCCGGAGCAACCTCTACCGTGTGA...CTGACCCCTAGAGGAGACAGTTTTGACCTCTTCAGCACCAGGAAGGAAGCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp CTGTCCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTGCCATAGAGGGCCTCTaGGATGTAGTGGGAGCCATA +
Preference number: 4 (lower is better)
Translates to: LSLHRSPPGVHGRKKAECAIEGL*DVVGAI
Trigger: TATGGCTCCCACTACATCGCAGAGGCCCTCTATGGC...ACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp AGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTGGCAGGAAGAAGGCCATAGAGGGCCTCTaGGATGTAGTGGGAGCCATA +
Preference number: 4 (lower is better)
Translates to: RSPPGVHGRKKAECGRKKAIEGL*DVVGAI
Trigger: TATGGCTCCCACTACATCGCAGAGGCCCTCTATGGC...CTTCTTCCTGCCACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp GGGCCAGAAAGCGGCAGAGCCCAGGGTTGCACAGTGAGCTTATTAGCAGCACCAGGCAGAGCCCAGGGTTaGACAGTGAGCTTATTAGCA +
Preference number: 4 (lower is better)
Translates to: GPESGRAQGCTVSLLAAPGRAQG*TVSLLA
Trigger: TGCTAATAAGCTCACTGTGCAACCCTGGGCTCTGCC...TGGTGCTGCTAATAAGCTCACTGTGCAACCCTGGGCTCTGCCGCTTTCTGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417725.1
CDS-3UTR CCA 90 bp CAAAGGCCGCTTGGTCTCCACCTGAAAACTTCTGCCTCGGGATTGACAGCCATCGATTTCCAGCAGCACTaGTGTGGGGCTCAGCTGCTC +
Preference number: 4 (lower is better)
Translates to: QRPLGLHLKTSASGLTAIDFQQH*CGAQLL
Trigger: GAGCAGCTGAGCCCCACACCAGTGCTGCTGGAAATC...GATGGCTGTCAATCCCGAGGCAGAAGTTTTCAGGTGGAGACCAAGCGGCCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp GGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCCCACAAACTCAATAATGTCCGAAGGGGGCTGCAGTTaGGGAGCCCATTGGCATCAA +
Preference number: 4 (lower is better)
Translates to: GRPTGSRKRQGPTNSIMSEGGCS*GAHWHQ
Trigger: TTGATGCCAATGGGCTCCCCAACTGCAGCCCCCTTC...GGACATTATTGAGTTTGTGGGACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp AAACTGTCCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGGAAGGGGGCTGCAGTTaGGGAGCCCATTGGCATCAA +
Preference number: 4 (lower is better)
Translates to: KLSLHRSPPGVHGRKKAEEGGCS*GAHWHQ
Trigger: TTGATGCCAATGGGCTCCCCAACTGCAGCCCCCTTC...CTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGGACAGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp CACAGGAGAAACCGTTTGCTTTGGCCTTGCTGGCAAGCTTCATCTGCTAGGCCCAGGAGACCACAGTACTaGAGGGCTCCACTGTTGGGG +
Preference number: 4 (lower is better)
Translates to: HRRNRLLWPCWQASSARPRRPQY*RAPLLG
Trigger: CCCCAACAGTGGAGCCCTCCAGTACTGTGGTCTCCT...GGGCCTAGCAGATGAAGCTTGCCAGCAAGGCCAAAGCAAACGGTTTCTCCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp CTGTCCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTTCAGGGACCTCTCCATaGCTTCGACCAGCTGCTACA +
Preference number: 4 (lower is better)
Translates to: LSLHRSPPGVHGRKKAECSGTSP*LRPAAT
Trigger: TGTAGCAGCTGGTCGAAGCCATGGAGAGGTCCCTGA...ACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp GGTCTCCACCTGAAAACTTCTGCCTCGGGATTGACAGCCATCCATAAGAAAAGGCGCCGTAGAATCAGGTaGGCCTTCCTGGGCCCCAGC +
Preference number: 4 (lower is better)
Translates to: GLHLKTSASGLTAIHKKRRRRIR*AFLGPS
Trigger: GCTGGGGCCCAGGAAGGCCCACCTGATTCTACGGCG...CCTTTTCTTATGGATGGCTGTCAATCCCGAGGCAGAAGTTTTCAGGTGGAGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp CAAAGGCCGCTTGGTCTCCACCTGAAAACTTCTGCCTCGGGATTGACAGCCATCAGGAGGCTGGAGCAGTaGCTACTCACCCTCTCCAGT +
Preference number: 4 (lower is better)
Translates to: QRPLGLHLKTSASGLTAIRRLEQ*LLTLSS
Trigger: ACTGGAGAGGGTGAGTAGCCACTGCTCCAGCCTCCT...GATGGCTGTCAATCCCGAGGCAGAAGTTTTCAGGTGGAGACCAAGCGGCCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp GCAAAGGCCGCTTGGTCTCCACCTGAAAACTTCTGCCTCGGGATTGACAGCCATAGGAGGCTGGAGCAGTaGCTACTCACCCTCTCCAGT +
Preference number: 4 (lower is better)
Translates to: AKAAWSPPENFCLGIDSHRRLEQ*LLTLSS
Trigger: ACTGGAGAGGGTGAGTAGCCACTGCTCCAGCCTCCT...ATGGCTGTCAATCCCGAGGCAGAAGTTTTCAGGTGGAGACCAAGCGGCCTTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp ATCCACAGGAGAAACCGTTTGCTTTGGCCTTGCTGGCAAGCTTCATCTGCTAGGCACTCCGCAGGAGGCTaGAGCAGTGGCTACTCACCC +
Preference number: 4 (lower is better)
Translates to: IHRRNRLLWPCWQASSARHSAGG*SSGYSP
Trigger: GGGTGAGTAGCCACTGCTCCAGCCTCCTGCGGAGTG...CCTAGCAGATGAAGCTTGCCAGCAAGGCCAAAGCAAACGGTTTCTCCTGTGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp GCAAAGGCCGCTTGGTCTCCACCTGAAAACTTCTGCCTCGGGATTGACAGCCATAGAGTGTGGGTCACCTaGCTGCCAAACTCGTCCTCG +
Preference number: 4 (lower is better)
Translates to: AKAAWSPPENFCLGIDSHRVWVT*LPNSSS
Trigger: CGAGGACGAGTTTGGCAGCCAGGTGACCCACACTCT...ATGGCTGTCAATCCCGAGGCAGAAGTTTTCAGGTGGAGACCAAGCGGCCTTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp CCTCAGAGCTTCCTTCCTGGTGCTGAAGAGGTCAAAACTGTCTCCTCTAGGGGTTGTGCTGCGCAGGGGTaGTTGCAGCTGACCGATCTC +
Preference number: 4 (lower is better)
Translates to: PQSFLPGAEEVKTVSSRGCAAQG*LQLTDL
Trigger: GAGATCGGTCAGCTGCAACCACCCCTGCGCAGCACA...ACCCCTAGAGGAGACAGTTTTGACCTCTTCAGCACCAGGAAGGAAGCTCTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000313400.9
ENST00000373986.7
CDS-3UTR CCA 90 bp CAGGGACTCTGGGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCCCACAAACTAATACAGGGAAAGCTTaGCCGGGTTTAACCAGTCGG +
Preference number: 4 (lower is better)
Translates to: QGLWADPQVAGRGRVPQTNTGKA*PGLTSR
Trigger: CCGACTGGTTAAACCCGGCCAAGCTTTCCCTGTATT...AGTTTGTGGGACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCCCAGAGTCCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp GGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCCCACAAACTCAATAATGTCCGCACTCTCCGGTTTCTaGGTCGCAGAGCTGCTCACA +
Preference number: 4 (lower is better)
Translates to: GRPTGSRKRQGPTNSIMSALSGF*VAELLT
Trigger: TGTGAGCAGCTCTGCGACCCAGAAACCGGAGAGTGC...GGACATTATTGAGTTTGTGGGACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp TGTCCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTGCAGAGCCATCCTTCATaGGTTTCAGCTCCTCAGGGC +
Preference number: 4 (lower is better)
Translates to: CPSIGLLQGSMAGRKQSVQSHPS*VSAPQG
Trigger: GCCCTGAGGAGCTGAAACCCATGAAGGATGGCTCTG...CACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp AGGAGAAACCGTTTGCTTTGGCCTTGCTGGCAAGCTTCATCTGCTAGGCCCATCGAGCAGTTGGAGGTCTaGAAGGGGCTCGGAGAGGAC +
Preference number: 4 (lower is better)
Translates to: RRNRLLWPCWQASSARPIEQLEV*KGLGED
Trigger: GTCCTCTCCGAGCCCCTTCCAGACCTCCAACTGCTC...GATGGGCCTAGCAGATGAAGCTTGCCAGCAAGGCCAAAGCAAACGGTTTCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp CAATGGCACCCCTCTCTTTGGGGCCTTCTCCAATCCATCCTTCACCCTGTAGTGTCTCCAGTGAGCAGTTaGAGGTCTGGAAGGGGCTCG +
Preference number: 4 (lower is better)
Translates to: QWHPSLWGLLQSILHPVVSPVSS*RSGRGS
Trigger: CGAGCCCCTTCCAGACCTCCAACTGCTCACTGGAGA...CACTACAGGGTGAAGGATGGATTGGAGAAGGCCCCAAAGAGAGGGGTGCCATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000313400.9
CDS-3UTR CCA 90 bp GGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCCCACAAACTCAATAATGTCCGCCACTGCTGCACCATaGGGTAACCCATGGCCTCAT +
Preference number: 4 (lower is better)
Translates to: GRPTGSRKRQGPTNSIMSATAAP*GNPWPH
Trigger: ATGAGGCCATGGGTTACCCCATGGTGCAGCAGTGGC...GGACATTATTGAGTTTGTGGGACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp TCAGGTCAAAACTGTCCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAGCCACTGCTGCACCATaGGGTAACCCATGGCCTCAT +
Preference number: 4 (lower is better)
Translates to: SGQNCPSIGLLQGSMAGRATAAP*GNPWPH
Trigger: ATGAGGCCATGGGTTACCCCATGGTGCAGCAGTGGC...TCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGGACAGTTTTGACCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp ACAGGCCTGCAGGGACTCTGGGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCCATATGCTCTGTGACTaGCACAGGGTAGATACTCAA +
Preference number: 4 (lower is better)
Translates to: TGLQGLWADPQVAGRGRVHMLCD*HRVDTQ
Trigger: TTGAGTATCTACCCTGTGCCAGTCACAGAGCATATG...GACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCCCAGAGTCCCTGCAGGCCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313400.9
CDS-3UTR CCA 90 bp AGAAAGCGGCAGAGCCCAGGGTTGCACAGTGAGCTTATTAGCAGCACCAGGATAAGGATTCCAGGAGGCTaGGCCCCAGCTCATCCTCAC +
Preference number: 4 (lower is better)
Translates to: RKRQSPGLHSELISSTRIRIPGG*APAHPH
Trigger: GTGAGGATGAGCTGGGGCCCAGCCTCCTGGAATCCT...TATCCTGGTGCTGCTAATAAGCTCACTGTGCAACCCTGGGCTCTGCCGCTTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417725.1
CDS-3UTR TCA 90 bp CTGTCCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTTGTCGGCCTCCCAGCTaGGTAGGCAAAACATTCCTT +
Preference number: 4 (lower is better)
Translates to: LSLHRSPPGVHGRKKAECCRPPS*VGKTFL
Trigger: AAGGAATGTTTTGCCTACTCAGCTGGGAGGCCGACA...ACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288520.9
CDS-3UTR TCA 90 bp GGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCCCACAAACTCAATAATGTCCGGCTGTCAGCAAACCTaGGAGGTAGGTGATGAAGGG +
Preference number: 4 (lower is better)
Translates to: GRPTGSRKRQGPTNSIMSGCQQT*EVGDEG
Trigger: CCCTTCATCACCTACCTCTCAGGTTTGCTGACAGCC...GGACATTATTGAGTTTGTGGGACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR TCA 90 bp CAGGGACTCTGGGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCCCACAAACTTGCCATTGTCTTGGATaGGGGTATAAAGTGGCACCA +
Preference number: 4 (lower is better)
Translates to: QGLWADPQVAGRGRVPQTCHCLG*GYKVAP
Trigger: TGGTGCCACTTTATACCCTCATCCAAGACAATGGCA...AGTTTGTGGGACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCCCAGAGTCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR TCA 90 bp GCAAAGGCCGCTTGGTCTCCACCTGAAAACTTCTGCCTCGGGATTGACAGCCATGTCCCAATAGCTGGCTaGACATCCACCCACTCCAAG +
Preference number: 4 (lower is better)
Translates to: AKAAWSPPENFCLGIDSHVPIAG*TSTHSK
Trigger: CTTGGAGTGGGTGGATGTTCAGCCAGCTATTGGGAC...ATGGCTGTCAATCCCGAGGCAGAAGTTTTCAGGTGGAGACCAAGCGGCCTTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR TCA 90 bp GGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCCCACAAACTCAATAATGTCCGTCCCAATAGCTGGCTaGACATCCACCCACTCCAAG +
Preference number: 4 (lower is better)
Translates to: GRPTGSRKRQGPTNSIMSVPIAG*TSTHSK
Trigger: CTTGGAGTGGGTGGATGTTCAGCCAGCTATTGGGAC...GGACATTATTGAGTTTGTGGGACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR TCA 90 bp GGCCTTGCTGGCAAGCTTCATCTGCTAGGCCCATCCTCAGCTGTCCCCCAGCCCACACTTGAAGATGACTaGGTAGATACTGACTTCAGG +
Preference number: 4 (lower is better)
Translates to: GLAGKLHLLGPSSAVPQPTLEDD*VDTDFR
Trigger: CCTGAAGTCAGTATCTACTCAGTCATCTTCAAGTGT...GGGCTGGGGGACAGCTGAGGATGGGCCTAGCAGATGAAGCTTGCCAGCAAGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR TCA 90 bp CTGTCCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTCGTGTTTCGGGCCATTaGCACCATCTTCTCCTCACA +
Preference number: 4 (lower is better)
Translates to: LSLHRSPPGVHGRKKAECRVSGH*HHLLLT
Trigger: TGTGAGGAGAAGATGGTGTCAATGGCCCGAAACACG...ACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR TCA 90 bp GCAAAGGCCGCTTGGTCTCCACCTGAAAACTTCTGCCTCGGGATTGACAGCCATGGATGGGCACGCCAATaGCGGAATTGTGGGTTTGCA +
Preference number: 4 (lower is better)
Translates to: AKAAWSPPENFCLGIDSHGWARQ*RNCGFA
Trigger: TGCAAACCCACAATTCCGTCATTGGCGTGCCCATCC...ATGGCTGTCAATCCCGAGGCAGAAGTTTTCAGGTGGAGACCAAGCGGCCTTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313400.9
ENST00000361209.6
CDS-3UTR TCA 90 bp TTGCTTTGGCCTTGCTGGCAAGCTTCATCTGCTAGGCCCATCCTCAGCTGTCCCGAGTCACCTTCACAGTaGGTGGACAAGACATCTGGC +
Preference number: 4 (lower is better)
Translates to: LLWPCWQASSARPILSCPESPSQ*VDKTSG
Trigger: GCCAGATGTCTTGTCCACTCACTGTGAAGGTGACTC...GGGACAGCTGAGGATGGGCCTAGCAGATGAAGCTTGCCAGCAAGGCCAAAGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR TCA 90 bp CTGTCCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTCCACAAAGCTTTTGCTaGCAGGAAGCCAGAGGCCTT +
Preference number: 4 (lower is better)
Translates to: LSLHRSPPGVHGRKKAECPQSFC*QEARGL
Trigger: AAGGCCTCTGGCTTCCTGTCAGCAAAAGCTTTGTGG...ACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR TCA 90 bp ATCCACAGGAGAAACCGTTTGCTTTGGCCTTGCTGGCAAGCTTCATCTGCTAGGCTGCAGGGTCTTCCGTaGCGAGCACATCGGTCTTGC +
Preference number: 4 (lower is better)
Translates to: IHRRNRLLWPCWQASSARLQGLP*RAHRSC
Trigger: GCAAGACCGATGTGCTCGTCACGGAAGACCCTGCAG...CCTAGCAGATGAAGCTTGCCAGCAAGGCCAAAGCAAACGGTTTCTCCTGTGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR TCA 90 bp CAGAGCTTCCTTCCTGGTGCTGAAGAGGTCAAAACTGTCTCCTCTAGGGGTCAGAGCCATAGTGCTGGATaGAGGACAGCAGCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: QSFLPGAEEVKTVSSRGQSHSAG*RTAAPP
Trigger: GGGAGGAGCTGCTGTCCTTCATCCAGCACTATGGCT...CTGACCCCTAGAGGAGACAGTTTTGACCTCTTCAGCACCAGGAAGGAAGCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR TCA 90 bp AGGAGAAACCGTTTGCTTTGGCCTTGCTGGCAAGCTTCATCTGCTAGGCCCATCAGCCATAGTGCTGGATaGAGGACAGCAGCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: RRNRLLWPCWQASSARPISHSAG*RTAAPP
Trigger: GGGAGGAGCTGCTGTCCTTCATCCAGCACTATGGCT...GATGGGCCTAGCAGATGAAGCTTGCCAGCAAGGCCAAAGCAAACGGTTTCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp AGGAGAAACCGTTTGCTTTGGCCTTGCTGGCAAGCTTCATCTGCTAGGCCCATCTGCAGGGACAGGGGCTaGAGAGTGTACTCCCCAAGT +
Preference number: 4 (lower is better)
Translates to: RRNRLLWPCWQASSARPICRDRG*RVYSPS
Trigger: ACTTGGGGAGTACACTCTGCAGCCCCTGTCCCTGCA...GATGGGCCTAGCAGATGAAGCTTGCCAGCAAGGCCAAAGCAAACGGTTTCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288520.9
CDS-3UTR GCA 90 bp AGGAGAAACCGTTTGCTTTGGCCTTGCTGGCAAGCTTCATCTGCTAGGCCCATCGTGGTCTCTTCAGTCTaGAGGGACAGGGGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: RRNRLLWPCWQASSARPIVVSSV*RDRGCR
Trigger: TCTGCAGCCCCTGTCCCTGCAGACTGAAGAGACCAC...GATGGGCCTAGCAGATGAAGCTTGCCAGCAAGGCCAAAGCAAACGGTTTCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288520.9
CDS-3UTR GCA 90 bp GGCCCCAGGATCCAGGAGAATACTGCTCCCCCTCCCATGGAGAGTCTCTGTGCTGTAGGAACTCATCAGTaGACTCTTGAAGGCCTCCTT +
Preference number: 4 (lower is better)
Translates to: GPRIQENTAPPPMESLCAVGTHQ*TLEGLL
Trigger: AAGGAGGCCTTCAAGAGTGCACTGATGAGTTCCTAC...AGCACAGAGACTCTCCATGGGAGGGGGAGCAGTATTCTCCTGGATCCTGGGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp TGTCCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTGGTGCTTAGCTCTGAGTaGCTCCCTCGTGTATCCACA +
Preference number: 4 (lower is better)
Translates to: CPSIGLLQGSMAGRKQSVVLSSE*LPRVST
Trigger: TGTGGATACACGAGGGAGGCACTCAGAGCTAAGCAC...CACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp AGGAGAAACCGTTTGCTTTGGCCTTGCTGGCAAGCTTCATCTGCTAGGCCCATCTCCTCAGGGTCACCGTaGTTAGCTCTGAGTGCCTCC +
Preference number: 4 (lower is better)
Translates to: RRNRLLWPCWQASSARPISSGSP*LALSAS
Trigger: GGAGGCACTCAGAGCTAAGCACGGTGACCCTGAGGA...GATGGGCCTAGCAGATGAAGCTTGCCAGCAAGGCCAAAGCAAACGGTTTCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp ATCCACAGGAGAAACCGTTTGCTTTGGCCTTGCTGGCAAGCTTCATCTGCTAGGATACCACACCATGCCTaGAGGCCGGACCTCCTCGCT +
Preference number: 4 (lower is better)
Translates to: IHRRNRLLWPCWQASSARIPHHA*RPDLLA
Trigger: AGCGAGGAGGTCCGGCCTGCAGGCATGGTGTGGTAT...CCTAGCAGATGAAGCTTGCCAGCAAGGCCAAAGCAAACGGTTTCTCCTGTGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp GGGTCAGGTCAAAACTGTCCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGACCACCTGAAAACTTCTaGCTCGGGATTGACAGCCAT +
Preference number: 4 (lower is better)
Translates to: GSGQNCPSIGLLQGSMAGPPENF*LGIDSH
Trigger: ATGGCTGTCAATCCCGAGGCAGAAGTTTTCAGGTGG...TCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGGACAGTTTTGACCTGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp CCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTGGCACCACCTGAAAACTTCTaGCTCGGGATTGACAGCCAT +
Preference number: 4 (lower is better)
Translates to: PSIGLLQGSMAGRKQSVAPPENF*LGIDSH
Trigger: ATGGCTGTCAATCCCGAGGCAGAAGTTTTCAGGTGG...TGCCACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp GCTTCAAGGCAGCATCAAGCTTCTTGCCCAAAGCTTCCAATGCCTTGCCAAGCTATGCATGGACAGGCCTaGAGGGACTCTGGGCAGACC +
Preference number: 4 (lower is better)
Translates to: ASRQHQASCPKLPMPCQAMHGQA*RDSGQT
Trigger: GGTCTGCCCAGAGTCCCTGCAGGCCTGTCCATGCAT...AGCTTGGCAAGGCATTGGAAGCTTTGGGCAAGAAGCTTGATGCTGCCTTGAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313400.9
CDS-3UTR GCA 90 bp CCTCAGAGCTTCCTTCCTGGTGCTGAAGAGGTCAAAACTGTCTCCTCTAGGGGTCAGCGAGATGTCCGCTaGTGTGCCAGACATCTCCAG +
Preference number: 4 (lower is better)
Translates to: PQSFLPGAEEVKTVSSRGQRDVR*CARHLQ
Trigger: CTGGAGATGTCTGGCACAGCAGCGGACATCTCGCTG...ACCCCTAGAGGAGACAGTTTTGACCTCTTCAGCACCAGGAAGGAAGCTCTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313400.9
ENST00000361209.6
CDS-3UTR GCA 90 bp AGAAGAGCAAAGGCCGCTTGGTCTCCACCTGAAAACTTCTGCCTCGGGATTGACCAGCGAGATGTCCGCTaGTGTGCCAGACATCTCCAG +
Preference number: 4 (lower is better)
Translates to: RRAKAAWSPPENFCLGIDQRDVR*CARHLQ
Trigger: CTGGAGATGTCTGGCACAGCAGCGGACATCTCGCTG...GTCAATCCCGAGGCAGAAGTTTTCAGGTGGAGACCAAGCGGCCTTTGCTCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313400.9
ENST00000361209.6
CDS-3UTR GCA 90 bp TTGCCCAAAGCTTCCAATGCCTTGCCAAGCTCCCAGCCTCACCTTTTAACACTTCGCTCTTCTGGGGGATaGGGCGACGCTTCTGCCAAC +
Preference number: 4 (lower is better)
Translates to: LPKASNALPSSQPHLLTLRSSGG*GDASAN
Trigger: GTTGGCAGAAGCGTCGCCGCATCCCCCAGAAGAGCG...AAGTGTTAAAAGGTGAGGCTGGGAGCTTGGCAAGGCATTGGAAGCTTTGGGCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000313400.9
CDS-3UTR GCA 90 bp AGAAGAGCAAAGGCCGCTTGGTCTCCACCTGAAAACTTCTGCCTCGGGATTGACAGTGGCTTCTGTGCTTaGGCTCTTCTGGGGGATGCG +
Preference number: 4 (lower is better)
Translates to: RRAKAAWSPPENFCLGIDSGFCA*ALLGDA
Trigger: CGCATCCCCCAGAAGAGCGCAAGCACAGAAGCCACT...GTCAATCCCGAGGCAGAAGTTTTCAGGTGGAGACCAAGCGGCCTTTGCTCTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313400.9
ENST00000361209.6
CDS-3UTR GCA 90 bp CCTCAGAGCTTCCTTCCTGGTGCTGAAGAGGTCAAAACTGTCTCCTCTAGGGGTTCAGCAAACCTTTGCTaGGGCGGCGACTGCGGTACT +
Preference number: 4 (lower is better)
Translates to: PQSFLPGAEEVKTVSSRGSANLC*GGDCGT
Trigger: AGTACCGCAGTCGCCGCCGCAGCAAAGGTTTGCTGA...ACCCCTAGAGGAGACAGTTTTGACCTCTTCAGCACCAGGAAGGAAGCTCTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp GCAAAGGCCGCTTGGTCTCCACCTGAAAACTTCTGCCTCGGGATTGACAGCCATGACAAGACATCTGGCTaGCACACACCATGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: AKAAWSPPENFCLGIDSHDKTSG*HTPWPG
Trigger: TCCTGGCCATGGTGTGTGGCAGCCAGATGTCTTGTC...ATGGCTGTCAATCCCGAGGCAGAAGTTTTCAGGTGGAGACCAAGCGGCCTTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp AGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTGGCAGGAAGAAGGAAGCTGCTTCCATCTaGTATGAAGTGCTCGGGCAC +
Preference number: 4 (lower is better)
Translates to: RSPPGVHGRKKAECGRKKEAASI*YEVLGH
Trigger: GTGCCCGAGCACTTCATAGCAGATGGAAGCAGCTTC...CTTCTTCCTGCCACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp CTGTCCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTGAAGCTGCTTCCATCTaGTATGAAGTGCTCGGGCAC +
Preference number: 4 (lower is better)
Translates to: LSLHRSPPGVHGRKKAECEAASI*YEVLGH
Trigger: GTGCCCGAGCACTTCATAGCAGATGGAAGCAGCTTC...ACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp GGGTCAGGTCAAAACTGTCCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGACATCAGAGCAGTCAATaGCTTTGGAGTGGTCGTAGC +
Preference number: 4 (lower is better)
Translates to: GSGQNCPSIGLLQGSMAGHQSSQ*LWSGRS
Trigger: GCTACGACCACTCCAAAGGCATTGACTGCTCTGATG...TCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGGACAGTTTTGACCTGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp TTGCTTTGGCCTTGCTGGCAAGCTTCATCTGCTAGGCCCATCCTCAGCTGTCCCATTAGTGAAGCCTGCTaGGAGGGTGATGGTGCTGAG +
Preference number: 4 (lower is better)
Translates to: LLWPCWQASSARPILSCPISEAC*EGDGAE
Trigger: CTCAGCACCATCACCCTCGCAGCAGGCTTCACTAAT...GGGACAGCTGAGGATGGGCCTAGCAGATGAAGCTTGCCAGCAAGGCCAAAGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp AGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTGGCAGGAAGAAGATTAGTGAAGCCTGCTaGGAGGGTGATGGTGCTGAG +
Preference number: 4 (lower is better)
Translates to: RSPPGVHGRKKAECGRKKISEAC*EGDGAE
Trigger: CTCAGCACCATCACCCTCGCAGCAGGCTTCACTAAT...CTTCTTCCTGCCACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp CACAGGAGAAACCGTTTGCTTTGGCCTTGCTGGCAAGCTTCATCTGCTAGGCCCGCCATAGAGGGCCTCTaGGATGTAGTGGGAGCCATA +
Preference number: 4 (lower is better)
Translates to: HRRNRLLWPCWQASSARPAIEGL*DVVGAI
Trigger: TATGGCTCCCACTACATCGCAGAGGCCCTCTATGGC...GGGCCTAGCAGATGAAGCTTGCCAGCAAGGCCAAAGCAAACGGTTTCTCCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp CAGAGCTTCCTTCCTGGTGCTGAAGAGGTCAAAACTGTCTCCTCTAGGGGTCAGTGGAGCCACAGCTGCTaGTGGACCTTCTTGCTGGGA +
Preference number: 4 (lower is better)
Translates to: QSFLPGAEEVKTVSSRGQWSHSC*WTFLLG
Trigger: TCCCAGCAAGAAGGTCCAGCAGCAGCTGTGGCTCCA...CTGACCCCTAGAGGAGACAGTTTTGACCTCTTCAGCACCAGGAAGGAAGCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp CAGGGACTCTGGGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCCCACAAACTACACCTGAAATGAGCTaGTCATCTGACAGCATCTGG +
Preference number: 4 (lower is better)
Translates to: QGLWADPQVAGRGRVPQTTPEMS*SSDSIW
Trigger: CCAGATGCTGTCAGATGACCAGCTCATTTCAGGTGT...AGTTTGTGGGACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCCCAGAGTCCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp AAACTGTCCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGAAGGTGACAGGTAGATaGACAGCGCCCCTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: KLSLHRSPPGVHGRKKAEKVTGR*TAPLLL
Trigger: GAGGAGAAGGGGCGCTGTCCATCTACCTGTCACCTT...CTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGGACAGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp AGAGAAGTCCTTAAAGACCCATGCTTCCTCACTGCAACCATCCTCAGAGCTTCCCAGCTGCTCCTTGCCTaGCCGGCGGCAAAGGTGACA +
Preference number: 4 (lower is better)
Translates to: REVLKDPCFLTATILRASQLLLA*PAAKVT
Trigger: TGTCACCTTTGCCGCCGGCCAGGCAAGGAGCAGCTG...GGAAGCTCTGAGGATGGTTGCAGTGAGGAAGCATGGGTCTTTAAGGACTTCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp GGTCTCCACCTGAAAACTTCTGCCTCGGGATTGACAGCCATCCATAAGAAAAGGCAGCTGCTCCTTGCCTaGCCGGCGGCAAAGGTGACA +
Preference number: 4 (lower is better)
Translates to: GLHLKTSASGLTAIHKKRQLLLA*PAAKVT
Trigger: TGTCACCTTTGCCGCCGGCCAGGCAAGGAGCAGCTG...CCTTTTCTTATGGATGGCTGTCAATCCCGAGGCAGAAGTTTTCAGGTGGAGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp AGAAGAGCAAAGGCCGCTTGGTCTCCACCTGAAAACTTCTGCCTCGGGATTGACGAAGGGGGCTGCAGTTaGGGAGCCCATTGGCATCAA +
Preference number: 4 (lower is better)
Translates to: RRAKAAWSPPENFCLGIDEGGCS*GAHWHQ
Trigger: TTGATGCCAATGGGCTCCCCAACTGCAGCCCCCTTC...GTCAATCCCGAGGCAGAAGTTTTCAGGTGGAGACCAAGCGGCCTTTGCTCTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp CTCAGAGCTTCCTTCCTGGTGCTGAAGAGGTCAAAACTGTCTCCTCTAGGGGTCAGGAGACCACAGTACTaGAGGGCTCCACTGTTGGGG +
Preference number: 4 (lower is better)
Translates to: LRASFLVLKRSKLSPLGVRRPQY*RAPLLG
Trigger: CCCCAACAGTGGAGCCCTCCAGTACTGTGGTCTCCT...GACCCCTAGAGGAGACAGTTTTGACCTCTTCAGCACCAGGAAGGAAGCTCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp AGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTGGCAGGAAGAAGCTTGGTCCCAATAGCTaGCTGAACATCCACCCACTC +
Preference number: 4 (lower is better)
Translates to: RSPPGVHGRKKAECGRKKLGPNS*LNIHPL
Trigger: GAGTGGGTGGATGTTCAGCCAGCTATTGGGACCAAG...CTTCTTCCTGCCACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp GGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCCCACAAACTCAATAATGTCCTCAGGGACCTCTCCATaGCTTCGACCAGCTGCTACA +
Preference number: 4 (lower is better)
Translates to: GRPTGSRKRQGPTNSIMSSGTSP*LRPAAT
Trigger: TGTAGCAGCTGGTCGAAGCCATGGAGAGGTCCCTGA...GGACATTATTGAGTTTGTGGGACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp TCAGGTCAAAACTGTCCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGATCAGGGACCTCTCCATaGCTTCGACCAGCTGCTACA +
Preference number: 4 (lower is better)
Translates to: SGQNCPSIGLLQGSMAGRSGTSP*LRPAAT
Trigger: TGTAGCAGCTGGTCGAAGCCATGGAGAGGTCCCTGA...TCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGGACAGTTTTGACCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp AAACTGTCCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTCAGGGACCTCTCCATaGCTTCGACCAGCTGCTACA +
Preference number: 4 (lower is better)
Translates to: KLSLHRSPPGVHGRKKAESGTSP*LRPAAT
Trigger: TGTAGCAGCTGGTCGAAGCCATGGAGAGGTCCCTGA...CTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGGACAGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp GCAAAGGCCGCTTGGTCTCCACCTGAAAACTTCTGCCTCGGGATTGACAGCCATTCAGGGACCTCTCCATaGCTTCGACCAGCTGCTACA +
Preference number: 4 (lower is better)
Translates to: AKAAWSPPENFCLGIDSHSGTSP*LRPAAT
Trigger: TGTAGCAGCTGGTCGAAGCCATGGAGAGGTCCCTGA...ATGGCTGTCAATCCCGAGGCAGAAGTTTTCAGGTGGAGACCAAGCGGCCTTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp AAACTGTCCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGGTTGTCATCTACCAGTaGACAGGCCGTCCTCAGGGT +
Preference number: 4 (lower is better)
Translates to: KLSLHRSPPGVHGRKKAEVVIYQ*TGRPQG
Trigger: ACCCTGAGGACGGCCTGTCCACTGGTAGATGACAAC...CTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGGACAGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp CACAGGAGAAACCGTTTGCTTTGGCCTTGCTGGCAAGCTTCATCTGCTAGGCCCGTTGTCATCTACCAGTaGACAGGCCGTCCTCAGGGT +
Preference number: 4 (lower is better)
Translates to: HRRNRLLWPCWQASSARPVVIYQ*TGRPQG
Trigger: ACCCTGAGGACGGCCTGTCCACTGGTAGATGACAAC...GGGCCTAGCAGATGAAGCTTGCCAGCAAGGCCAAAGCAAACGGTTTCTCCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp AGAGAAGTCCTTAAAGACCCATGCTTCCTCACTGCAACCATCCTCAGAGCTTCCTCAGGTGGGCCTTCCTaGGCCCCAGCTCATCCTCAC +
Preference number: 4 (lower is better)
Translates to: REVLKDPCFLTATILRASSGGPS*APAHPH
Trigger: GTGAGGATGAGCTGGGGCCCAGGAAGGCCCACCTGA...GGAAGCTCTGAGGATGGTTGCAGTGAGGAAGCATGGGTCTTTAAGGACTTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp GGTCTCCACCTGAAAACTTCTGCCTCGGGATTGACAGCCATCCATAAGAAAAGGCACTCCGCAGGAGGCTaGAGCAGTGGCTACTCACCC +
Preference number: 4 (lower is better)
Translates to: GLHLKTSASGLTAIHKKRHSAGG*SSGYSP
Trigger: GGGTGAGTAGCCACTGCTCCAGCCTCCTGCGGAGTG...CCTTTTCTTATGGATGGCTGTCAATCCCGAGGCAGAAGTTTTCAGGTGGAGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp GGTCTCCACCTGAAAACTTCTGCCTCGGGATTGACAGCCATCCATAAGAAAAGGTTCTGCCAACGTCGCTaGGCGTACAGCGCCACGGTG +
Preference number: 4 (lower is better)
Translates to: GLHLKTSASGLTAIHKKRFCQRR*AYSATV
Trigger: CACCGTGGCGCTGTACGCCCAGCGACGTTGGCAGAA...CCTTTTCTTATGGATGGCTGTCAATCCCGAGGCAGAAGTTTTCAGGTGGAGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313400.9
ENST00000361209.6
CDS-3UTR CCA 90 bp AGAGAAGTCCTTAAAGACCCATGCTTCCTCACTGCAACCATCCTCAGAGCTTCCGTGCTTGCGCTCTTCTaGGGGATGCGGCGACGCTTC +
Preference number: 4 (lower is better)
Translates to: REVLKDPCFLTATILRASVLALF*GMRRRF
Trigger: GAAGCGTCGCCGCATCCCCCAGAAGAGCGCAAGCAC...GGAAGCTCTGAGGATGGTTGCAGTGAGGAAGCATGGGTCTTTAAGGACTTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313400.9
ENST00000361209.6
CDS-3UTR CCA 90 bp CTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTGGCAGGAGTGGATCTCATGAGTaGCTTCTGTGCTTGCGCTCT +
Preference number: 4 (lower is better)
Translates to: LHRSPPGVHGRKKAECGRSGSHE*LLCLRS
Trigger: AGAGCGCAAGCACAGAAGCCACTCATGAGATCCACT...CCTGCCACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313400.9
ENST00000361209.6
CDS-3UTR CCA 90 bp CAATGGCACCCCTCTCTTTGGGGCCTTCTCCAATCCATCCTTCACCCTGTAGTGAGACTGTCCAGAGTGTaGGTCACCTGGCTGCCAAAC +
Preference number: 4 (lower is better)
Translates to: QWHPSLWGLLQSILHPVVRLSRV*VTWLPN
Trigger: GTTTGGCAGCCAGGTGACCCACACTCTGGACAGTCT...CACTACAGGGTGAAGGATGGATTGGAGAAGGCCCCAAAGAGAGGGGTGCCATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313400.9
CDS-3UTR CCA 90 bp CACAGGAGAAACCGTTTGCTTTGGCCTTGCTGGCAAGCTTCATCTGCTAGGCCCAGACTGTCCAGAGTGTaGGTCACCTGGCTGCCAAAC +
Preference number: 4 (lower is better)
Translates to: HRRNRLLWPCWQASSARPRLSRV*VTWLPN
Trigger: GTTTGGCAGCCAGGTGACCCACACTCTGGACAGTCT...GGGCCTAGCAGATGAAGCTTGCCAGCAAGGCCAAAGCAAACGGTTTCTCCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp AAACTGTCCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGGGAAGCCAGAGGCCTTaGCCCAAGCTGAAAGTAGAC +
Preference number: 4 (lower is better)
Translates to: KLSLHRSPPGVHGRKKAEGSQRP*PKLKVD
Trigger: GTCTACTTTCAGCTTGGGCCAAGGCCTCTGGCTTCC...CTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGGACAGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313400.9
ENST00000361209.6
CDS-3UTR CCA 90 bp GCAAAGGCCGCTTGGTCTCCACCTGAAAACTTCTGCCTCGGGATTGACAGCCATAGAGCAGTCACGAACTaGCCCGAAGGAAGACAGCAG +
Preference number: 4 (lower is better)
Translates to: AKAAWSPPENFCLGIDSHRAVTN*PEGRQQ
Trigger: CTGCTGTCTTCCTTCGGGCCAGTTCGTGACTGCTCT...ATGGCTGTCAATCCCGAGGCAGAAGTTTTCAGGTGGAGACCAAGCGGCCTTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp CTGTCCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTAGCAGTCAATGCCTTTaGAGTGGTCGTAGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: LSLHRSPPGVHGRKKAECSSQCL*SGRSSQ
Trigger: CTGGCTGCTACGACCACTCCAAAGGCATTGACTGCT...ACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp AAACTGTCCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGGAAGACTTGGCCTTaGTTCACATGCTGGGTCCGG +
Preference number: 4 (lower is better)
Translates to: KLSLHRSPPGVHGRKKAEWKTWP*FTCWVR
Trigger: CCGGACCCAGCATGTGAACCAAGGCCAAGTCTTCCA...CTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGGACAGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp CTCAGAGCTTCCTTCCTGGTGCTGAAGAGGTCAAAACTGTCTCCTCTAGGGGTCTCTCCAGTGAGCAGTTaGAGGTCTGGAAGGGGCTCG +
Preference number: 4 (lower is better)
Translates to: LRASFLVLKRSKLSPLGVSPVSS*RSGRGS
Trigger: CGAGCCCCTTCCAGACCTCCAACTGCTCACTGGAGA...GACCCCTAGAGGAGACAGTTTTGACCTCTTCAGCACCAGGAAGGAAGCTCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp CAGAGCTTCCTTCCTGGTGCTGAAGAGGTCAAAACTGTCTCCTCTAGGGGTCAGGCCACTGCTGCACCATaGGGTAACCCATGGCCTCAT +
Preference number: 4 (lower is better)
Translates to: QSFLPGAEEVKTVSSRGQATAAP*GNPWPH
Trigger: ATGAGGCCATGGGTTACCCCATGGTGCAGCAGTGGC...CTGACCCCTAGAGGAGACAGTTTTGACCTCTTCAGCACCAGGAAGGAAGCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp TTGCTTTGGCCTTGCTGGCAAGCTTCATCTGCTAGGCCCATCCTCAGCTGTCCCAGTTGTCACCTAGGCTaGAGTCCAGTGGCTCCATGT +
Preference number: 4 (lower is better)
Translates to: LLWPCWQASSARPILSCPSCHLG*SPVAPC
Trigger: ACATGGAGCCACTGGACTCCAGCCTAGGTGACAACT...GGGACAGCTGAGGATGGGCCTAGCAGATGAAGCTTGCCAGCAAGGCCAAAGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313400.9
CDS-3UTR CCA 90 bp GGCCCCAGGATCCAGGAGAATACTGCTCCCCCTCCCATGGAGAGTCTCTGTGCTCCAACCAGATTTTCCTaGATGTCTGCCCAAGACTCA +
Preference number: 4 (lower is better)
Translates to: GPRIQENTAPPPMESLCAPTRFS*MSAQDS
Trigger: TGAGTCTTGGGCAGACATCCAGGAAAATCTGGTTGG...AGCACAGAGACTCTCCATGGGAGGGGGAGCAGTATTCTCCTGGATCCTGGGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000313400.9
CDS-3UTR TCA 90 bp TTGCTTTGGCCTTGCTGGCAAGCTTCATCTGCTAGGCCCATCCTCAGCTGTCCCTCTCCACACCTGAAATaGGCTGGTCATCTGACAGCA +
Preference number: 4 (lower is better)
Translates to: LLWPCWQASSARPILSCPSPHLK*AGHLTA
Trigger: TGCTGTCAGATGACCAGCTCATTTCAGGTGTGGAGA...GGGACAGCTGAGGATGGGCCTAGCAGATGAAGCTTGCCAGCAAGGCCAAAGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR TCA 90 bp AAACTGTCCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGCACATCCCCTTTCCCTaGGCACCAGTAGGAACTCAT +
Preference number: 4 (lower is better)
Translates to: KLSLHRSPPGVHGRKKAEHIPFP*APVGTH
Trigger: ATGAGTTCCTACTGGTGCTCAGGGAAAGGGGATGTG...CTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGGACAGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR TCA 90 bp ATCCACAGGAGAAACCGTTTGCTTTGGCCTTGCTGGCAAGCTTCATCTGCTAGGTGGCATCAAAGGCGCTaGGGTCACACCTGCACCAGT +
Preference number: 4 (lower is better)
Translates to: IHRRNRLLWPCWQASSARWHQRR*GHTCTS
Trigger: ACTGGTGCAGGTGTGACCTCAGCGCCTTTGATGCCA...CCTAGCAGATGAAGCTTGCCAGCAAGGCCAAAGCAAACGGTTTCTCCTGTGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR TCA 90 bp AGGAGAAACCGTTTGCTTTGGCCTTGCTGGCAAGCTTCATCTGCTAGGCCCATCGTCCCAATAGCTGGCTaGACATCCACCCACTCCAAG +
Preference number: 4 (lower is better)
Translates to: RRNRLLWPCWQASSARPIVPIAG*TSTHSK
Trigger: CTTGGAGTGGGTGGATGTTCAGCCAGCTATTGGGAC...GATGGGCCTAGCAGATGAAGCTTGCCAGCAAGGCCAAAGCAAACGGTTTCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR TCA 90 bp CCTCAGAGCTTCCTTCCTGGTGCTGAAGAGGTCAAAACTGTCTCCTCTAGGGGTGTCCCAATAGCTGGCTaGACATCCACCCACTCCAAG +
Preference number: 4 (lower is better)
Translates to: PQSFLPGAEEVKTVSSRGVPIAG*TSTHSK
Trigger: CTTGGAGTGGGTGGATGTTCAGCCAGCTATTGGGAC...ACCCCTAGAGGAGACAGTTTTGACCTCTTCAGCACCAGGAAGGAAGCTCTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR TCA 90 bp TCAGGTCAAAACTGTCCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGACCACAGCATACAGAGTaGACTTGTAGAGACCGTCGG +
Preference number: 4 (lower is better)
Translates to: SGQNCPSIGLLQGSMAGRPQHTE*TCRDRR
Trigger: CCGACGGTCTCTACAAGTTCACTCTGTATGCTGTGG...TCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGGACAGTTTTGACCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR TCA 90 bp GGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCCCACAAACTCAATAATGTCCCCACAGCATACAGAGTaGACTTGTAGAGACCGTCGG +
Preference number: 4 (lower is better)
Translates to: GRPTGSRKRQGPTNSIMSPQHTE*TCRDRR
Trigger: CCGACGGTCTCTACAAGTTCACTCTGTATGCTGTGG...GGACATTATTGAGTTTGTGGGACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR TCA 90 bp TCAGGTCAAAACTGTCCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAGAACAGCATCGAGGCTaGGACCTCCATCAGTGTGTT +
Preference number: 4 (lower is better)
Translates to: SGQNCPSIGLLQGSMAGREQHRG*DLHQCV
Trigger: AACACACTGATGGAGGTCTCAGCCTCGATGCTGTTC...TCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGGACAGTTTTGACCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR TCA 90 bp GCAAAGGCCGCTTGGTCTCCACCTGAAAACTTCTGCCTCGGGATTGACAGCCATGAACAGCATCGAGGCTaGGACCTCCATCAGTGTGTT +
Preference number: 4 (lower is better)
Translates to: AKAAWSPPENFCLGIDSHEQHRG*DLHQCV
Trigger: AACACACTGATGGAGGTCTCAGCCTCGATGCTGTTC...ATGGCTGTCAATCCCGAGGCAGAAGTTTTCAGGTGGAGACCAAGCGGCCTTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR TCA 90 bp CACAGGAGAAACCGTTTGCTTTGGCCTTGCTGGCAAGCTTCATCTGCTAGGCCCCGTGTTTCGGGCCATTaGCACCATCTTCTCCTCACA +
Preference number: 4 (lower is better)
Translates to: HRRNRLLWPCWQASSARPRVSGH*HHLLLT
Trigger: TGTGAGGAGAAGATGGTGTCAATGGCCCGAAACACG...GGGCCTAGCAGATGAAGCTTGCCAGCAAGGCCAAAGCAAACGGTTTCTCCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR TCA 90 bp CCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTGGCACTTCTGCCTCGGGATTaGCAGCCATCCATAAGAAAA +
Preference number: 4 (lower is better)
Translates to: PSIGLLQGSMAGRKQSVALLPRD*QPSIRK
Trigger: TTTTCTTATGGATGGCTGTCAATCCCGAGGCAGAAG...TGCCACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR TCA 90 bp GGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCCCACAAACTCAATAATGTCCCGCGGAAACTCTCCTTaGACTTCTGCATCAGGGACT +
Preference number: 4 (lower is better)
Translates to: GRPTGSRKRQGPTNSIMSRGNSP*TSASGT
Trigger: AGTCCCTGATGCAGAAGTTCAAGGAGAGTTTCCGCG...GGACATTATTGAGTTTGTGGGACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313400.9
ENST00000373986.7
CDS-3UTR TCA 90 bp CTCAGAGCTTCCTTCCTGGTGCTGAAGAGGTCAAAACTGTCTCCTCTAGGGGTCTGGCTCTCCCAAAGCTaGTTCCTCCTCGAGACTTGC +
Preference number: 4 (lower is better)
Translates to: LRASFLVLKRSKLSPLGVWLSQS*FLLETC
Trigger: GCAAGTCTCGAGGAGGAATCAGCTTTGGGAGAGCCA...GACCCCTAGAGGAGACAGTTTTGACCTCTTCAGCACCAGGAAGGAAGCTCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313400.9
ENST00000373986.7
CDS-3UTR TCA 90 bp CAAAGGCCGCTTGGTCTCCACCTGAAAACTTCTGCCTCGGGATTGACAGCCATCGAGTCACCTTCACAGTaGGTGGACAAGACATCTGGC +
Preference number: 4 (lower is better)
Translates to: QRPLGLHLKTSASGLTAIESPSQ*VDKTSG
Trigger: GCCAGATGTCTTGTCCACTCACTGTGAAGGTGACTC...GATGGCTGTCAATCCCGAGGCAGAAGTTTTCAGGTGGAGACCAAGCGGCCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR TCA 90 bp TCAGGTCAAAACTGTCCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGATGCTTCCATCTGCTATaGAGTGCTCGGGCACATGCA +
Preference number: 4 (lower is better)
Translates to: SGQNCPSIGLLQGSMAGRCFHLL*SARAHA
Trigger: TGCATGTGCCCGAGCACTTCATAGCAGATGGAAGCA...TCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGGACAGTTTTGACCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR TCA 90 bp AGGAGAAACCGTTTGCTTTGGCCTTGCTGGCAAGCTTCATCTGCTAGGCCCATCCGCAACCGCAGAACATaGAGATGGTGCTCGAAGTGG +
Preference number: 4 (lower is better)
Translates to: RRNRLLWPCWQASSARPIRNRRT*RWCSKW
Trigger: CCACTTCGAGCACCATCTTCATGTTCTGCGGTTGCG...GATGGGCCTAGCAGATGAAGCTTGCCAGCAAGGCCAAAGCAAACGGTTTCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR TCA 90 bp TCAGGTCAAAACTGTCCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGATCTGTGGTCTCTTTCTaGTACTGGAGCCACAGCTGC +
Preference number: 4 (lower is better)
Translates to: SGQNCPSIGLLQGSMAGRSVVSF*YWSHSC
Trigger: GCAGCTGTGGCTCCAGTATCAGAAAGAGACCACAGA...TCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGGACAGTTTTGACCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR TCA 90 bp CTGTCCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTGTTGCATATGCTCTGTaGCTGGCACAGGGTAGATAC +
Preference number: 4 (lower is better)
Translates to: LSLHRSPPGVHGRKKAECVAYAL*LAQGRY
Trigger: GTATCTACCCTGTGCCAGTCACAGAGCATATGCAAC...ACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313400.9
CDS-3UTR TCA 90 bp AAACTGTCCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGAACCTGATAGCTCTCTaGAAACTTGGGACCCAGGCC +
Preference number: 4 (lower is better)
Translates to: KLSLHRSPPGVHGRKKAENLIAL*KLGTQA
Trigger: GGCCTGGGTCCCAAGTTTTCAGAGAGCTATCAGGTT...CTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGGACAGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313400.9
CDS-3UTR GCA 90 bp GGGTCAGGTCAAAACTGTCCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAGTCGGTTTCTTCATCTaGACCAAGGAGACGGAAAAC +
Preference number: 4 (lower is better)
Translates to: GSGQNCPSIGLLQGSMAGVGFFI*TKETEN
Trigger: GTTTTCCGTCTCCTTGGTGCAGATGAAGAAACCGAC...TCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGGACAGTTTTGACCTGACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288520.9
ENST00000341734.8
CDS-3UTR GCA 90 bp CCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTGGCAGTCGGTTTCTTCATCTaGACCAAGGAGACGGAAAAC +
Preference number: 4 (lower is better)
Translates to: PSIGLLQGSMAGRKQSVAVGFFI*TKETEN
Trigger: GTTTTCCGTCTCCTTGGTGCAGATGAAGAAACCGAC...TGCCACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288520.9
ENST00000341734.8
CDS-3UTR GCA 90 bp CTGTCCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTCTGCTACACAAGATGTaGCCAGGCCAGAGAGTAAGT +
Preference number: 4 (lower is better)
Translates to: LSLHRSPPGVHGRKKAECLLHKM*PGQRVS
Trigger: ACTTACTCTCTGGCCTGGGCACATCTTGTGTAGCAG...ACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp GGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCCCACAAACTCAATAATGTCCATGGCTTCGACCAGCTaGTACACAAGATGTGCCCAG +
Preference number: 4 (lower is better)
Translates to: GRPTGSRKRQGPTNSIMSMASTS*YTRCAQ
Trigger: CTGGGCACATCTTGTGTAGCAGCTGGTCGAAGCCAT...GGACATTATTGAGTTTGTGGGACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp GCAAAGGCCGCTTGGTCTCCACCTGAAAACTTCTGCCTCGGGATTGACAGCCATATGGCTTCGACCAGCTaGTACACAAGATGTGCCCAG +
Preference number: 4 (lower is better)
Translates to: AKAAWSPPENFCLGIDSHMASTS*YTRCAQ
Trigger: CTGGGCACATCTTGTGTAGCAGCTGGTCGAAGCCAT...ATGGCTGTCAATCCCGAGGCAGAAGTTTTCAGGTGGAGACCAAGCGGCCTTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp CTGCAGGGACTCTGGGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCCCACAAGTCAGCTATTTCTTCTaGCTTGTTGTCATCTACCAG +
Preference number: 4 (lower is better)
Translates to: LQGLWADPQVAGRGRVPQVSYFF*LVVIYQ
Trigger: CTGGTAGATGACAACAAGGCAGAAGAAATAGCTGAC...TTGTGGGACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCCCAGAGTCCCTGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp GGTCTCCACCTGAAAACTTCTGCCTCGGGATTGACAGCCATCCATAAGAAAAGGGCCGGACCTCCTCGCTaGGGCAGAAAAGATAGGGCA +
Preference number: 4 (lower is better)
Translates to: GLHLKTSASGLTAIHKKRAGPPR*GRKDRA
Trigger: TGCCCTATCTTTTCTGCCGCAGCGAGGAGGTCCGGC...CCTTTTCTTATGGATGGCTGTCAATCCCGAGGCAGAAGTTTTCAGGTGGAGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp CCTCAGAGCTTCCTTCCTGGTGCTGAAGAGGTCAAAACTGTCTCCTCTAGGGGTCATGGAGAGTCTCTGTaGTCACGGAGGGCAATACCC +
Preference number: 4 (lower is better)
Translates to: PQSFLPGAEEVKTVSSRGHGESL*SRRAIP
Trigger: GGGTATTGCCCTCCGTGAGCACAGAGACTCTCCATG...ACCCCTAGAGGAGACAGTTTTGACCTCTTCAGCACCAGGAAGGAAGCTCTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp AGAAGAGCAAAGGCCGCTTGGTCTCCACCTGAAAACTTCTGCCTCGGGATTGACCATGGAGAGTCTCTGTaGTCACGGAGGGCAATACCC +
Preference number: 4 (lower is better)
Translates to: RRAKAAWSPPENFCLGIDHGESL*SRRAIP
Trigger: GGGTATTGCCCTCCGTGAGCACAGAGACTCTCCATG...GTCAATCCCGAGGCAGAAGTTTTCAGGTGGAGACCAAGCGGCCTTTGCTCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp TGTCCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTGCGTTTGCTTTGGCCTTaGTGGCAAGCTTCATCTGCT +
Preference number: 4 (lower is better)
Translates to: CPSIGLLQGSMAGRKQSVRLLWP*WQASSA
Trigger: AGCAGATGAAGCTTGCCAGCAAGGCCAAAGCAAACG...CACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp TTGCTTTGGCCTTGCTGGCAAGCTTCATCTGCTAGGCCCATCCTCAGCTGTCCCCGTTTGCTTTGGCCTTaGTGGCAAGCTTCATCTGCT +
Preference number: 4 (lower is better)
Translates to: LLWPCWQASSARPILSCPRLLWP*WQASSA
Trigger: AGCAGATGAAGCTTGCCAGCAAGGCCAAAGCAAACG...GGGACAGCTGAGGATGGGCCTAGCAGATGAAGCTTGCCAGCAAGGCCAAAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp AAACTGTCCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGCGTGGAAGTACAAGGTaGCATTCTCCAGCCACTGCT +
Preference number: 4 (lower is better)
Translates to: KLSLHRSPPGVHGRKKAERGSTR*HSPATA
Trigger: AGCAGTGGCTGGAGAATGGCACCTTGTACTTCCACG...CTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGGACAGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313400.9
ENST00000361209.6
CDS-3UTR GCA 90 bp TTGCTTTGGCCTTGCTGGCAAGCTTCATCTGCTAGGCCCATCCTCAGCTGTCCCTGGAGGATGTGCATCTaGTCCTCAACAATCTCCGAG +
Preference number: 4 (lower is better)
Translates to: LLWPCWQASSARPILSCPWRMCI*SSTISE
Trigger: CTCGGAGATTGTTGAGGAGCAGATGCACATCCTCCA...GGGACAGCTGAGGATGGGCCTAGCAGATGAAGCTTGCCAGCAAGGCCAAAGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313400.9
ENST00000361209.6
CDS-3UTR GCA 90 bp AAACTGTCCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGACGGAATTGTGGGTTTaGAGCCGGGATGAACGGAAG +
Preference number: 4 (lower is better)
Translates to: KLSLHRSPPGVHGRKKAETELWV*SRDERK
Trigger: CTTCCGTTCATCCCGGCTGCAAACCCACAATTCCGT...CTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGGACAGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313400.9
ENST00000361209.6
CDS-3UTR GCA 90 bp CCTCAGAGCTTCCTTCCTGGTGCTGAAGAGGTCAAAACTGTCTCCTCTAGGGGTGACAAGACATCTGGCTaGCACACACCATGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: PQSFLPGAEEVKTVSSRGDKTSG*HTPWPG
Trigger: TCCTGGCCATGGTGTGTGGCAGCCAGATGTCTTGTC...ACCCCTAGAGGAGACAGTTTTGACCTCTTCAGCACCAGGAAGGAAGCTCTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp AGGAGAAACCGTTTGCTTTGGCCTTGCTGGCAAGCTTCATCTGCTAGGCCCATCGACAAGACATCTGGCTaGCACACACCATGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: RRNRLLWPCWQASSARPIDKTSG*HTPWPG
Trigger: TCCTGGCCATGGTGTGTGGCAGCCAGATGTCTTGTC...GATGGGCCTAGCAGATGAAGCTTGCCAGCAAGGCCAAAGCAAACGGTTTCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp GGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCCCACAAACTCAATAATGTCCAAGTGCTCGGGCACATaGAGAGTCACCTTCACAGTG +
Preference number: 4 (lower is better)
Translates to: GRPTGSRKRQGPTNSIMSKCSGT*RVTFTV
Trigger: CACTGTGAAGGTGACTCTGCATGTGCCCGAGCACTT...GGACATTATTGAGTTTGTGGGACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp TGTCACCTAGGCTGGAGTCCAGTGGCTCCATGTCAGTTCACTGCAAACTCTGCCGAAGCTGCTTCCATCTaGTATGAAGTGCTCGGGCAC +
Preference number: 4 (lower is better)
Translates to: CHLGWSPVAPCQFTANSAEAASI*YEVLGH
Trigger: GTGCCCGAGCACTTCATAGCAGATGGAAGCAGCTTC...GGCAGAGTTTGCAGTGAACTGACATGGAGCCACTGGACTCCAGCCTAGGTGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313400.9
CDS-3UTR GCA 90 bp CAAAGGCCGCTTGGTCTCCACCTGAAAACTTCTGCCTCGGGATTGACAGCCATCAGCCTTCATGACAGCTaGACTCTCCGGTTTCTGGGT +
Preference number: 4 (lower is better)
Translates to: QRPLGLHLKTSASGLTAISLHDS*TLRFLG
Trigger: ACCCAGAAACCGGAGAGTGCAGCTGTCATGAAGGCT...GATGGCTGTCAATCCCGAGGCAGAAGTTTTCAGGTGGAGACCAAGCGGCCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp AGGAGAAACCGTTTGCTTTGGCCTTGCTGGCAAGCTTCATCTGCTAGGCCCATCTCTGTCCCCAGTCACTaGGCACACACAGGTGTCTGT +
Preference number: 4 (lower is better)
Translates to: RRNRLLWPCWQASSARPISVPSH*AHTGVC
Trigger: ACAGACACCTGTGTGTGCGCAGTGACTGGGGACAGA...GATGGGCCTAGCAGATGAAGCTTGCCAGCAAGGCCAAAGCAAACGGTTTCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp CCTCAGAGCTTCCTTCCTGGTGCTGAAGAGGTCAAAACTGTCTCCTCTAGGGGTTCTGTCCCCAGTCACTaGGCACACACAGGTGTCTGT +
Preference number: 4 (lower is better)
Translates to: PQSFLPGAEEVKTVSSRGSVPSH*AHTGVC
Trigger: ACAGACACCTGTGTGTGCGCAGTGACTGGGGACAGA...ACCCCTAGAGGAGACAGTTTTGACCTCTTCAGCACCAGGAAGGAAGCTCTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp CACAGGAGAAACCGTTTGCTTTGGCCTTGCTGGCAAGCTTCATCTGCTAGGCCCTTCTTCCCTGACATCTaGAGGGTCTTCCGTGACGAG +
Preference number: 4 (lower is better)
Translates to: HRRNRLLWPCWQASSARPFFPDI*RVFRDE
Trigger: CTCGTCACGGAAGACCCTGCAGATGTCAGGGAAGAA...GGGCCTAGCAGATGAAGCTTGCCAGCAAGGCCAAAGCAAACGGTTTCTCCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp GCTTCAAGGCAGCATCAAGCTTCTTGCCCAAAGCTTCCAATGCCTTGCCAAGCTGCCCAAAGCTTCCAATaGCTTGCCAAGCTCCCAGCC +
Preference number: 4 (lower is better)
Translates to: ASRQHQASCPKLPMPCQAAQSFQ*LAKLPA
Trigger: GGCTGGGAGCTTGGCAAGGCATTGGAAGCTTTGGGC...AGCTTGGCAAGGCATTGGAAGCTTTGGGCAAGAAGCTTGATGCTGCCTTGAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313400.9
CDS-3UTR CCA 90 bp ATCCACAGGAGAAACCGTTTGCTTTGGCCTTGCTGGCAAGCTTCATCTGCTAGGTGCTGCCCAGCTCTGTaGTCTCTTCAGTCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: IHRRNRLLWPCWQASSARCCPAL*SLQSAG
Trigger: CCCTGCAGACTGAAGAGACCACAGAGCTGGGCAGCA...CCTAGCAGATGAAGCTTGCCAGCAAGGCCAAAGCAAACGGTTTCTCCTGTGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288520.9
CDS-3UTR CCA 90 bp AAGAGAGAGAAGTCCTTAAAGACCCATGCTTCCTCACTGCAACCATCCTCAGAGCCAGCAGCACTGGTGTaGGGCTCAGCTGCTCCTTGC +
Preference number: 4 (lower is better)
Translates to: KREKSLKTHASSLQPSSEPAALV*GSAAPC
Trigger: GCAAGGAGCAGCTGAGCCCCACACCAGTGCTGCTGG...CTCTGAGGATGGTTGCAGTGAGGAAGCATGGGTCTTTAAGGACTTCTCTCTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp GCAAAGGCCGCTTGGTCTCCACCTGAAAACTTCTGCCTCGGGATTGACAGCCATCTTGGTCCCAATAGCTaGCTGAACATCCACCCACTC +
Preference number: 4 (lower is better)
Translates to: AKAAWSPPENFCLGIDSHLGPNS*LNIHPL
Trigger: GAGTGGGTGGATGTTCAGCCAGCTATTGGGACCAAG...ATGGCTGTCAATCCCGAGGCAGAAGTTTTCAGGTGGAGACCAAGCGGCCTTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp GGTCTCCACCTGAAAACTTCTGCCTCGGGATTGACAGCCATCCATAAGAAAAGGTCCCTCACCGGCCCTTaGACTCCCCGTACGTGTTTC +
Preference number: 4 (lower is better)
Translates to: GLHLKTSASGLTAIHKKRSLTGP*TPRTCF
Trigger: GAAACACGTACGGGGAGTCCAAGGGCCGGTGAGGGA...CCTTTTCTTATGGATGGCTGTCAATCCCGAGGCAGAAGTTTTCAGGTGGAGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp AGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTGGCAGGAAGAAGAGAGCAAAGGCCGCTTaGTCTCCACCTGAAAACTTC +
Preference number: 4 (lower is better)
Translates to: RSPPGVHGRKKAECGRKKRAKAA*SPPENF
Trigger: GAAGTTTTCAGGTGGAGACCAAGCGGCCTTTGCTCT...CTTCTTCCTGCCACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp AAGAGAGAGAAGTCCTTAAAGACCCATGCTTCCTCACTGCAACCATCCTCAGAGGGCCTGCAGGGACTCTaGGCAGACCCACAGGTAGCA +
Preference number: 4 (lower is better)
Translates to: KREKSLKTHASSLQPSSEGLQGL*ADPQVA
Trigger: TGCTACCTGTGGGTCTGCCCAGAGTCCCTGCAGGCC...CTCTGAGGATGGTTGCAGTGAGGAAGCATGGGTCTTTAAGGACTTCTCTCTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp CAGAGCTTCCTTCCTGGTGCTGAAGAGGTCAAAACTGTCTCCTCTAGGGGTCAGAGACTGTCCAGAGTGTaGGTCACCTGGCTGCCAAAC +
Preference number: 4 (lower is better)
Translates to: QSFLPGAEEVKTVSSRGQRLSRV*VTWLPN
Trigger: GTTTGGCAGCCAGGTGACCCACACTCTGGACAGTCT...CTGACCCCTAGAGGAGACAGTTTTGACCTCTTCAGCACCAGGAAGGAAGCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp CAAAGGCCGCTTGGTCTCCACCTGAAAACTTCTGCCTCGGGATTGACAGCCATCCACCTTCACAGTGAGTaGACAAGACATCTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: QRPLGLHLKTSASGLTAIHLHSE*TRHLAA
Trigger: GGCAGCCAGATGTCTTGTCCACTCACTGTGAAGGTG...GATGGCTGTCAATCCCGAGGCAGAAGTTTTCAGGTGGAGACCAAGCGGCCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp CACAGGAGAAACCGTTTGCTTTGGCCTTGCTGGCAAGCTTCATCTGCTAGGCCCCACCTTCACAGTGAGTaGACAAGACATCTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: HRRNRLLWPCWQASSARPHLHSE*TRHLAA
Trigger: GGCAGCCAGATGTCTTGTCCACTCACTGTGAAGGTG...GGGCCTAGCAGATGAAGCTTGCCAGCAAGGCCAAAGCAAACGGTTTCTCCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp AAACTGTCTCCTCTAGGGGTCAGGTCAAAACTGTCCCTCCATAGGTCTCCTCCAGAGGTCCCTCACCCATaGGGAGGTGGCATTGATCTG +
Preference number: 4 (lower is better)
Translates to: KLSPLGVRSKLSLHRSPPEVPHP*GGGIDL
Trigger: CAGATCAATGCCACCTCCCCATGGGTGAGGGACCTC...TGGAGGAGACCTATGGAGGGACAGTTTTGACCTGACCCCTAGAGGAGACAGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp AAACTGTCTCCTCTAGGGGTCAGGTCAAAACTGTCCCTCCATAGGTCTCCTCCAGCACTCTCCGGTTTCTaGGTCGCAGAGCTGCTCACA +
Preference number: 4 (lower is better)
Translates to: KLSPLGVRSKLSLHRSPPALSGF*VAELLT
Trigger: TGTGAGCAGCTCTGCGACCCAGAAACCGGAGAGTGC...TGGAGGAGACCTATGGAGGGACAGTTTTGACCTGACCCCTAGAGGAGACAGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp CTCAGAGCTTCCTTCCTGGTGCTGAAGAGGTCAAAACTGTCTCCTCTAGGGGTCGGAAGCCAGAGGCCTTaGCCCAAGCTGAAAGTAGAC +
Preference number: 4 (lower is better)
Translates to: LRASFLVLKRSKLSPLGVGSQRP*PKLKVD
Trigger: GTCTACTTTCAGCTTGGGCCAAGGCCTCTGGCTTCC...GACCCCTAGAGGAGACAGTTTTGACCTCTTCAGCACCAGGAAGGAAGCTCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313400.9
ENST00000361209.6
CDS-3UTR CCA 90 bp AGGAGAAACCGTTTGCTTTGGCCTTGCTGGCAAGCTTCATCTGCTAGGCCCATCCAGAGCCATCCTTCATaGGTTTCAGCTCCTCAGGGC +
Preference number: 4 (lower is better)
Translates to: RRNRLLWPCWQASSARPIQSHPS*VSAPQG
Trigger: GCCCTGAGGAGCTGAAACCCATGAAGGATGGCTCTG...GATGGGCCTAGCAGATGAAGCTTGCCAGCAAGGCCAAAGCAAACGGTTTCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp CTCAGAGCTTCCTTCCTGGTGCTGAAGAGGTCAAAACTGTCTCCTCTAGGGGTCTGGAAGACTTGGCCTTaGTTCACATGCTGGGTCCGG +
Preference number: 4 (lower is better)
Translates to: LRASFLVLKRSKLSPLGVWKTWP*FTCWVR
Trigger: CCGGACCCAGCATGTGAACCAAGGCCAAGTCTTCCA...GACCCCTAGAGGAGACAGTTTTGACCTCTTCAGCACCAGGAAGGAAGCTCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp CCTCAGAGCTTCCTTCCTGGTGCTGAAGAGGTCAAAACTGTCTCCTCTAGGGGTAGCCCATCGGCCAGCTaGGGAAAGTCCTTGATGAAG +
Preference number: 4 (lower is better)
Translates to: PQSFLPGAEEVKTVSSRGSPSAS*GKSLMK
Trigger: CTTCATCAAGGACTTTCCCCAGCTGGCCGATGGGCT...ACCCCTAGAGGAGACAGTTTTGACCTCTTCAGCACCAGGAAGGAAGCTCTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp CCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTGGCATTCTTGCTGGGAAAGTaGATGATGCAGGTGAGCTCT +
Preference number: 4 (lower is better)
Translates to: PSIGLLQGSMAGRKQSVAFLLGK*MMQVSS
Trigger: AGAGCTCACCTGCATCATCCACTTTCCCAGCAAGAA...TGCCACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp GGGTCAGGTCAAAACTGTCCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGACAGGGAAGGGTACACTaGAAGCAGTGCAATTACCAT +
Preference number: 4 (lower is better)
Translates to: GSGQNCPSIGLLQGSMAGQGRVH*KQCNYH
Trigger: ATGGTAATTGCACTGCTTCCAGTGTACCCTTCCCTG...TCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGGACAGTTTTGACCTGACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313400.9
CDS-3UTR TCA 90 bp AAACTGTCTCCTCTAGGGGTCAGGTCAAAACTGTCCCTCCATAGGTCTCCTCCAGGCTGTCAGCAAACCTaGGAGGTAGGTGATGAAGGG +
Preference number: 4 (lower is better)
Translates to: KLSPLGVRSKLSLHRSPPGCQQT*EVGDEG
Trigger: CCCTTCATCACCTACCTCTCAGGTTTGCTGACAGCC...TGGAGGAGACCTATGGAGGGACAGTTTTGACCTGACCCCTAGAGGAGACAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR TCA 90 bp AGAAGAGCAAAGGCCGCTTGGTCTCCACCTGAAAACTTCTGCCTCGGGATTGACAATGAGCTGGTCATCTaGCAGCATCTGGGCTGTCAG +
Preference number: 4 (lower is better)
Translates to: RRAKAAWSPPENFCLGIDNELVI*QHLGCQ
Trigger: CTGACAGCCCAGATGCTGTCAGATGACCAGCTCATT...GTCAATCCCGAGGCAGAAGTTTTCAGGTGGAGACCAAGCGGCCTTTGCTCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR TCA 90 bp CAAAGGCCGCTTGGTCTCCACCTGAAAACTTCTGCCTCGGGATTGACAGCCATCTCTCCACACCTGAAATaGGCTGGTCATCTGACAGCA +
Preference number: 4 (lower is better)
Translates to: QRPLGLHLKTSASGLTAISPHLK*AGHLTA
Trigger: TGCTGTCAGATGACCAGCTCATTTCAGGTGTGGAGA...GATGGCTGTCAATCCCGAGGCAGAAGTTTTCAGGTGGAGACCAAGCGGCCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR TCA 90 bp GGTCTCCACCTGAAAACTTCTGCCTCGGGATTGACAGCCATCCATAAGAAAAGGGTGGCACCACACGGTTaGTTTCCAGCAGCACTGGTG +
Preference number: 4 (lower is better)
Translates to: GLHLKTSASGLTAIHKKRVAPHG*FPAALV
Trigger: CACCAGTGCTGCTGGAAATCAACCGTGTGGTGCCAC...CCTTTTCTTATGGATGGCTGTCAATCCCGAGGCAGAAGTTTTCAGGTGGAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR TCA 90 bp AGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTGGCAGGAAGAAGTGCCATTGTCTTGGATaGGGGTATAAAGTGGCACCA +
Preference number: 4 (lower is better)
Translates to: RSPPGVHGRKKAECGRKKCHCLG*GYKVAP
Trigger: TGGTGCCACTTTATACCCTCATCCAAGACAATGGCA...CTTCTTCCTGCCACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR TCA 90 bp CAAAGGCCGCTTGGTCTCCACCTGAAAACTTCTGCCTCGGGATTGACAGCCATCTCATCAGTGCACTCTTaGAGGCCTCCTTTGTGCCAT +
Preference number: 4 (lower is better)
Translates to: QRPLGLHLKTSASGLTAISSVHS*RPPLCH
Trigger: ATGGCACAAAGGAGGCCTTCAAGAGTGCACTGATGA...GATGGCTGTCAATCCCGAGGCAGAAGTTTTCAGGTGGAGACCAAGCGGCCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR TCA 90 bp CAATGGCACCCCTCTCTTTGGGGCCTTCTCCAATCCATCCTTCACCCTGTAGTGTCATCAGTGCACTCTTaGAGGCCTCCTTTGTGCCAT +
Preference number: 4 (lower is better)
Translates to: QWHPSLWGLLQSILHPVVSSVHS*RPPLCH
Trigger: ATGGCACAAAGGAGGCCTTCAAGAGTGCACTGATGA...CACTACAGGGTGAAGGATGGATTGGAGAAGGCCCCAAAGAGAGGGGTGCCATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313400.9
CDS-3UTR TCA 90 bp AGGAGAAACCGTTTGCTTTGGCCTTGCTGGCAAGCTTCATCTGCTAGGCCCATCCACATCCCCTTTCCCTaGGCACCAGTAGGAACTCAT +
Preference number: 4 (lower is better)
Translates to: RRNRLLWPCWQASSARPIHIPFP*APVGTH
Trigger: ATGAGTTCCTACTGGTGCTCAGGGAAAGGGGATGTG...GATGGGCCTAGCAGATGAAGCTTGCCAGCAAGGCCAAAGCAAACGGTTTCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR TCA 90 bp CTCAGAGCTTCCTTCCTGGTGCTGAAGAGGTCAAAACTGTCTCCTCTAGGGGTCCACATCCCCTTTCCCTaGGCACCAGTAGGAACTCAT +
Preference number: 4 (lower is better)
Translates to: LRASFLVLKRSKLSPLGVHIPFP*APVGTH
Trigger: ATGAGTTCCTACTGGTGCTCAGGGAAAGGGGATGTG...GACCCCTAGAGGAGACAGTTTTGACCTCTTCAGCACCAGGAAGGAAGCTCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR TCA 90 bp AGAGAAGTCCTTAAAGACCCATGCTTCCTCACTGCAACCATCCTCAGAGCTTCCTGGCATCAAAGGCGCTaGGGTCACACCTGCACCAGT +
Preference number: 4 (lower is better)
Translates to: REVLKDPCFLTATILRASWHQRR*GHTCTS
Trigger: ACTGGTGCAGGTGTGACCTCAGCGCCTTTGATGCCA...GGAAGCTCTGAGGATGGTTGCAGTGAGGAAGCATGGGTCTTTAAGGACTTCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR TCA 90 bp CAGGGACTCTGGGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCCCACAAACTACACTTGAAGATGACTaGGTAGATACTGACTTCAGG +
Preference number: 4 (lower is better)
Translates to: QGLWADPQVAGRGRVPQTTLEDD*VDTDFR
Trigger: CCTGAAGTCAGTATCTACTCAGTCATCTTCAAGTGT...AGTTTGTGGGACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCCCAGAGTCCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR TCA 90 bp AGAAGAGCAAAGGCCGCTTGGTCTCCACCTGAAAACTTCTGCCTCGGGATTGACCCACAGCATACAGAGTaGACTTGTAGAGACCGTCGG +
Preference number: 4 (lower is better)
Translates to: RRAKAAWSPPENFCLGIDPQHTE*TCRDRR
Trigger: CCGACGGTCTCTACAAGTTCACTCTGTATGCTGTGG...GTCAATCCCGAGGCAGAAGTTTTCAGGTGGAGACCAAGCGGCCTTTGCTCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR TCA 90 bp CCTCAGAGCTTCCTTCCTGGTGCTGAAGAGGTCAAAACTGTCTCCTCTAGGGGTCGTGTTTCGGGCCATTaGCACCATCTTCTCCTCACA +
Preference number: 4 (lower is better)
Translates to: PQSFLPGAEEVKTVSSRGRVSGH*HHLLLT
Trigger: TGTGAGGAGAAGATGGTGTCAATGGCCCGAAACACG...ACCCCTAGAGGAGACAGTTTTGACCTCTTCAGCACCAGGAAGGAAGCTCTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR TCA 90 bp CTGTCCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTCTTCTGCCTCGGGATTaGCAGCCATCCATAAGAAAA +
Preference number: 4 (lower is better)
Translates to: LSLHRSPPGVHGRKKAECLLPRD*QPSIRK
Trigger: TTTTCTTATGGATGGCTGTCAATCCCGAGGCAGAAG...ACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR TCA 90 bp GGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCCCACAAACTCAATAATGTCCCTTCCTTCCTGGTGCTaGAGAGGTCAAAACTGTCTC +
Preference number: 4 (lower is better)
Translates to: GRPTGSRKRQGPTNSIMSLPSWC*RGQNCL
Trigger: GAGACAGTTTTGACCTCTTCAGCACCAGGAAGGAAG...GGACATTATTGAGTTTGTGGGACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR TCA 90 bp CACAGGAGAAACCGTTTGCTTTGGCCTTGCTGGCAAGCTTCATCTGCTAGGCCCCTTCCTTCCTGGTGCTaGAGAGGTCAAAACTGTCTC +
Preference number: 4 (lower is better)
Translates to: HRRNRLLWPCWQASSARPLPSWC*RGQNCL
Trigger: GAGACAGTTTTGACCTCTTCAGCACCAGGAAGGAAG...GGGCCTAGCAGATGAAGCTTGCCAGCAAGGCCAAAGCAAACGGTTTCTCCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR TCA 90 bp AGGAGAAACCGTTTGCTTTGGCCTTGCTGGCAAGCTTCATCTGCTAGGCCCATCTGCTTCCATCTGCTATaGAGTGCTCGGGCACATGCA +
Preference number: 4 (lower is better)
Translates to: RRNRLLWPCWQASSARPICFHLL*SARAHA
Trigger: TGCATGTGCCCGAGCACTTCATAGCAGATGGAAGCA...GATGGGCCTAGCAGATGAAGCTTGCCAGCAAGGCCAAAGCAAACGGTTTCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR TCA 90 bp TGTCCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTGATGGGGAGGTGGCATTaGTCTGGTAATACAGGGAAA +
Preference number: 4 (lower is better)
Translates to: CPSIGLLQGSMAGRKQSVMGRWH*SGNTGK
Trigger: TTTCCCTGTATTACCAGATCAATGCCACCTCCCCAT...CACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR TCA 90 bp AGAAGAGCAAAGGCCGCTTGGTCTCCACCTGAAAACTTCTGCCTCGGGATTGACCCACAAAGCTTTTGCTaGCAGGAAGCCAGAGGCCTT +
Preference number: 4 (lower is better)
Translates to: RRAKAAWSPPENFCLGIDPQSFC*QEARGL
Trigger: AAGGCCTCTGGCTTCCTGTCAGCAAAAGCTTTGTGG...GTCAATCCCGAGGCAGAAGTTTTCAGGTGGAGACCAAGCGGCCTTTGCTCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR TCA 90 bp AGAGAAGTCCTTAAAGACCCATGCTTCCTCACTGCAACCATCCTCAGAGCTTCCATTTGGAGTCAGGTTTaGGGCACTTGGGGCCCTCGC +
Preference number: 4 (lower is better)
Translates to: REVLKDPCFLTATILRASIWSQV*GTWGPR
Trigger: GCGAGGGCCCCAAGTGCCTCAAACCTGACTCCAAAT...GGAAGCTCTGAGGATGGTTGCAGTGAGGAAGCATGGGTCTTTAAGGACTTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR TCA 90 bp CCTCAGAGCTTCCTTCCTGGTGCTGAAGAGGTCAAAACTGTCTCCTCTAGGGGTTCTGTGGTCTCTTTCTaGTACTGGAGCCACAGCTGC +
Preference number: 4 (lower is better)
Translates to: PQSFLPGAEEVKTVSSRGSVVSF*YWSHSC
Trigger: GCAGCTGTGGCTCCAGTATCAGAAAGAGACCACAGA...ACCCCTAGAGGAGACAGTTTTGACCTCTTCAGCACCAGGAAGGAAGCTCTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR TCA 90 bp ATCCACAGGAGAAACCGTTTGCTTTGGCCTTGCTGGCAAGCTTCATCTGCTAGGTGGGAAACAACCCCTTaGGGTGGGACCAGCATTGAC +
Preference number: 4 (lower is better)
Translates to: IHRRNRLLWPCWQASSARWETTP*GGTSID
Trigger: GTCAATGCTGGTCCCACCTCAAGGGGTTGTTTCCCA...CCTAGCAGATGAAGCTTGCCAGCAAGGCCAAAGCAAACGGTTTCTCCTGTGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313400.9
CDS-3UTR TCA 90 bp AGGAGACTGAGGGCCAGAAAGCGGCAGAGCCCAGGGTTGCACAGTGAGCTTATTAGGAGGCAGTTTCCTTaGTTCCTGCTGACATATCAG +
Preference number: 4 (lower is better)
Translates to: RRLRARKRQSPGLHSELIRRQFP*FLLTYQ
Trigger: CTGATATGTCAGCAGGAATCAAGGAAACTGCCTCCT...AATAAGCTCACTGTGCAACCCTGGGCTCTGCCGCTTTCTGGCCCTCAGTCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417725.1
CDS-3UTR GCA 90 bp CCTCAGAGCTTCCTTCCTGGTGCTGAAGAGGTCAAAACTGTCTCCTCTAGGGGTATGGCTTCGACCAGCTaGTACACAAGATGTGCCCAG +
Preference number: 4 (lower is better)
Translates to: PQSFLPGAEEVKTVSSRGMASTS*YTRCAQ
Trigger: CTGGGCACATCTTGTGTAGCAGCTGGTCGAAGCCAT...ACCCCTAGAGGAGACAGTTTTGACCTCTTCAGCACCAGGAAGGAAGCTCTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp CAAAGGCCGCTTGGTCTCCACCTGAAAACTTCTGCCTCGGGATTGACAGCCATCCGTTTGCTTTGGCCTTaGTGGCAAGCTTCATCTGCT +
Preference number: 4 (lower is better)
Translates to: QRPLGLHLKTSASGLTAIRLLWP*WQASSA
Trigger: AGCAGATGAAGCTTGCCAGCAAGGCCAAAGCAAACG...GATGGCTGTCAATCCCGAGGCAGAAGTTTTCAGGTGGAGACCAAGCGGCCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp GCAAAGGCCGCTTGGTCTCCACCTGAAAACTTCTGCCTCGGGATTGACAGCCATACAGGAGAAACCGTTTaGTTTGGCCTTGCTGGCAAG +
Preference number: 4 (lower is better)
Translates to: AKAAWSPPENFCLGIDSHTGETV*FGLAGK
Trigger: CTTGCCAGCAAGGCCAAAGCAAACGGTTTCTCCTGT...ATGGCTGTCAATCCCGAGGCAGAAGTTTTCAGGTGGAGACCAAGCGGCCTTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp TGTCCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTGGTCCTTAAAGACCCATaGTTCCTCACTGCAACCATC +
Preference number: 4 (lower is better)
Translates to: CPSIGLLQGSMAGRKQSVVLKDP*FLTATI
Trigger: GATGGTTGCAGTGAGGAAGCATGGGTCTTTAAGGAC...CACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp TTGCTTTGGCCTTGCTGGCAAGCTTCATCTGCTAGGCCCATCCTCAGCTGTCCCGTCCTTAAAGACCCATaGTTCCTCACTGCAACCATC +
Preference number: 4 (lower is better)
Translates to: LLWPCWQASSARPILSCPVLKDP*FLTATI
Trigger: GATGGTTGCAGTGAGGAAGCATGGGTCTTTAAGGAC...GGGACAGCTGAGGATGGGCCTAGCAGATGAAGCTTGCCAGCAAGGCCAAAGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp GGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCCCACAAACTCAATAATGTCCTGGAGGATGTGCATCTaGTCCTCAACAATCTCCGAG +
Preference number: 4 (lower is better)
Translates to: GRPTGSRKRQGPTNSIMSWRMCI*SSTISE
Trigger: CTCGGAGATTGTTGAGGAGCAGATGCACATCCTCCA...GGACATTATTGAGTTTGTGGGACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313400.9
ENST00000361209.6
CDS-3UTR GCA 90 bp CAAAGGCCGCTTGGTCTCCACCTGAAAACTTCTGCCTCGGGATTGACAGCCATCCTCTCCTTGAACTTCTaGATCAGGGACTCCACTGTC +
Preference number: 4 (lower is better)
Translates to: QRPLGLHLKTSASGLTAILSLNF*IRDSTV
Trigger: GACAGTGGAGTCCCTGATGCAGAAGTTCAAGGAGAG...GATGGCTGTCAATCCCGAGGCAGAAGTTTTCAGGTGGAGACCAAGCGGCCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313400.9
ENST00000373986.7
CDS-3UTR GCA 90 bp GCTTCAAGGCAGCATCAAGCTTCTTGCCCAAAGCTTCCAATGCCTTGCCAAGCTTTTTCAGCAAACCTTTaGTGCGGCGGCGACTGCGGT +
Preference number: 4 (lower is better)
Translates to: ASRQHQASCPKLPMPCQAFSANL*CGGDCG
Trigger: ACCGCAGTCGCCGCCGCAGCAAAGGTTTGCTGAAAA...AGCTTGGCAAGGCATTGGAAGCTTTGGGCAAGAAGCTTGATGCTGCCTTGAAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000313400.9
CDS-3UTR GCA 90 bp AGGAGAAACCGTTTGCTTTGGCCTTGCTGGCAAGCTTCATCTGCTAGGCCCATCCCATCTGCTATGAAGTaGTCGGGCACATGCAGAGTC +
Preference number: 4 (lower is better)
Translates to: RRNRLLWPCWQASSARPIPSAMK*SGTCRV
Trigger: GACTCTGCATGTGCCCGAGCACTTCATAGCAGATGG...GATGGGCCTAGCAGATGAAGCTTGCCAGCAAGGCCAAAGCAAACGGTTTCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp GCTTCAAGGCAGCATCAAGCTTCTTGCCCAAAGCTTCCAATGCCTTGCCAAGCTTCTGTCCCCAGTCACTaGGCACACACAGGTGTCTGT +
Preference number: 4 (lower is better)
Translates to: ASRQHQASCPKLPMPCQASVPSH*AHTGVC
Trigger: ACAGACACCTGTGTGTGCGCAGTGACTGGGGACAGA...AGCTTGGCAAGGCATTGGAAGCTTTGGGCAAGAAGCTTGATGCTGCCTTGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313400.9
CDS-3UTR GCA 90 bp CTCAGAGCTTCCTTCCTGGTGCTGAAGAGGTCAAAACTGTCTCCTCTAGGGGTCTTCTTCCCTGACATCTaGAGGGTCTTCCGTGACGAG +
Preference number: 4 (lower is better)
Translates to: LRASFLVLKRSKLSPLGVFFPDI*RVFRDE
Trigger: CTCGTCACGGAAGACCCTGCAGATGTCAGGGAAGAA...GACCCCTAGAGGAGACAGTTTTGACCTCTTCAGCACCAGGAAGGAAGCTCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp CCTCAGAGCTTCCTTCCTGGTGCTGAAGAGGTCAAAACTGTCTCCTCTAGGGGTTTCTTCCCTGACATCTaGAGGGTCTTCCGTGACGAG +
Preference number: 4 (lower is better)
Translates to: PQSFLPGAEEVKTVSSRGFFPDI*RVFRDE
Trigger: CTCGTCACGGAAGACCCTGCAGATGTCAGGGAAGAA...ACCCCTAGAGGAGACAGTTTTGACCTCTTCAGCACCAGGAAGGAAGCTCTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp GCAAAGGCCGCTTGGTCTCCACCTGAAAACTTCTGCCTCGGGATTGACAGCCATCATCAGAGCAGTCAATaGCTTTGGAGTGGTCGTAGC +
Preference number: 4 (lower is better)
Translates to: AKAAWSPPENFCLGIDSHHQSSQ*LWSGRS
Trigger: GCTACGACCACTCCAAAGGCATTGACTGCTCTGATG...ATGGCTGTCAATCCCGAGGCAGAAGTTTTCAGGTGGAGACCAAGCGGCCTTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp GGCCCCAGGATCCAGGAGAATACTGCTCCCCCTCCCATGGAGAGTCTCTGTGCTTGCTCTAACAGTGAGTaGAAAGAACCTCCATTCTTC +
Preference number: 4 (lower is better)
Translates to: GPRIQENTAPPPMESLCACSNSE*KEPPFF
Trigger: GAAGAATGGAGGTTCTTTGCACTCACTGTTAGAGCA...AGCACAGAGACTCTCCATGGGAGGGGGAGCAGTATTCTCCTGGATCCTGGGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000313400.9
CDS-3UTR GCA 90 bp CAGAGCTTCCTTCCTGGTGCTGAAGAGGTCAAAACTGTCTCCTCTAGGGGTCAGAGGCATGAGCCACTGTaGCTGGCAAGCAAATCCCAT +
Preference number: 4 (lower is better)
Translates to: QSFLPGAEEVKTVSSRGQRHEPL*LASKSH
Trigger: ATGGGATTTGCTTGCCAGGCACAGTGGCTCATGCCT...CTGACCCCTAGAGGAGACAGTTTTGACCTCTTCAGCACCAGGAAGGAAGCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313400.9
CDS-3UTR GCA 90 bp AAACTGTCTCCTCTAGGGGTCAGGTCAAAACTGTCCCTCCATAGGTCTCCTCCAAAGCTTCCAATGCCTTaGCAAGCTCCCAGCCTCACC +
Preference number: 4 (lower is better)
Translates to: KLSPLGVRSKLSLHRSPPKLPMP*QAPSLT
Trigger: GGTGAGGCTGGGAGCTTGGCAAGGCATTGGAAGCTT...TGGAGGAGACCTATGGAGGGACAGTTTTGACCTGACCCCTAGAGGAGACAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313400.9
CDS-3UTR CCA 90 bp ACAGGCCTGCAGGGACTCTGGGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCAGAGCAATGTGTTCATaGATAAACTTGTCTCTAGTG +
Preference number: 4 (lower is better)
Translates to: TGLQGLWADPQVAGRGRVRAMCS*INLSLV
Trigger: CACTAGAGACAAGTTTATCCATGAACACATTGCTCT...GACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCCCAGAGTCCCTGCAGGCCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288520.9
CDS-3UTR CCA 90 bp AGAGAAGTCCTTAAAGACCCATGCTTCCTCACTGCAACCATCCTCAGAGCTTCCGATTTCCAGCAGCACTaGTGTGGGGCTCAGCTGCTC +
Preference number: 4 (lower is better)
Translates to: REVLKDPCFLTATILRASDFQQH*CGAQLL
Trigger: GAGCAGCTGAGCCCCACACCAGTGCTGCTGGAAATC...GGAAGCTCTGAGGATGGTTGCAGTGAGGAAGCATGGGTCTTTAAGGACTTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp CTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTGGCAGGGATGAGGGTATAAAGTaGCACCACACGGTTGATTTC +
Preference number: 4 (lower is better)
Translates to: LHRSPPGVHGRKKAECGRDEGIK*HHTVDF
Trigger: GAAATCAACCGTGTGGTGCCACTTTATACCCTCATC...CCTGCCACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp CCTCAGAGCTTCCTTCCTGGTGCTGAAGAGGTCAAAACTGTCTCCTCTAGGGGTCTTGGTCCCAATAGCTaGCTGAACATCCACCCACTC +
Preference number: 4 (lower is better)
Translates to: PQSFLPGAEEVKTVSSRGLGPNS*LNIHPL
Trigger: GAGTGGGTGGATGTTCAGCCAGCTATTGGGACCAAG...ACCCCTAGAGGAGACAGTTTTGACCTCTTCAGCACCAGGAAGGAAGCTCTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp AAACTGTCTCCTCTAGGGGTCAGGTCAAAACTGTCCCTCCATAGGTCTCCTCCAGTTGTCATCTACCAGTaGACAGGCCGTCCTCAGGGT +
Preference number: 4 (lower is better)
Translates to: KLSPLGVRSKLSLHRSPPVVIYQ*TGRPQG
Trigger: ACCCTGAGGACGGCCTGTCCACTGGTAGATGACAAC...TGGAGGAGACCTATGGAGGGACAGTTTTGACCTGACCCCTAGAGGAGACAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp GGTCTCCACCTGAAAACTTCTGCCTCGGGATTGACAGCCATCCATAAGAAAAGGAGGAGGCTGGAGCAGTaGCTACTCACCCTCTCCAGT +
Preference number: 4 (lower is better)
Translates to: GLHLKTSASGLTAIHKKRRRLEQ*LLTLSS
Trigger: ACTGGAGAGGGTGAGTAGCCACTGCTCCAGCCTCCT...CCTTTTCTTATGGATGGCTGTCAATCCCGAGGCAGAAGTTTTCAGGTGGAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp CAAAGGCCGCTTGGTCTCCACCTGAAAACTTCTGCCTCGGGATTGACAGCCATCTTGCTTTGGCCTTGCTaGCAAGCTTCATCTGCTAGG +
Preference number: 4 (lower is better)
Translates to: QRPLGLHLKTSASGLTAILLWPC*QASSAR
Trigger: CCTAGCAGATGAAGCTTGCCAGCAAGGCCAAAGCAA...GATGGCTGTCAATCCCGAGGCAGAAGTTTTCAGGTGGAGACCAAGCGGCCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp GGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCCCACAAACTCAATAATGTCCACCCAGCAGCACAGATaGGATGTAGTGGATCTCATG +
Preference number: 4 (lower is better)
Translates to: GRPTGSRKRQGPTNSIMSTQQHR*DVVDLM
Trigger: CATGAGATCCACTACATCCCATCTGTGCTGCTGGGT...GGACATTATTGAGTTTGTGGGACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313400.9
ENST00000361209.6
CDS-3UTR CCA 90 bp GCAAAGGCCGCTTGGTCTCCACCTGAAAACTTCTGCCTCGGGATTGACAGCCATAATACAGGGAAAGCTTaGCCGGGTTTAACCAGTCGG +
Preference number: 4 (lower is better)
Translates to: AKAAWSPPENFCLGIDSHNTGKA*PGLTSR
Trigger: CCGACTGGTTAAACCCGGCCAAGCTTTCCCTGTATT...ATGGCTGTCAATCCCGAGGCAGAAGTTTTCAGGTGGAGACCAAGCGGCCTTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp GGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCCCACAAACTCAATAATGTCCAATACAGGGAAAGCTTaGCCGGGTTTAACCAGTCGG +
Preference number: 4 (lower is better)
Translates to: GRPTGSRKRQGPTNSIMSNTGKA*PGLTSR
Trigger: CCGACTGGTTAAACCCGGCCAAGCTTTCCCTGTATT...GGACATTATTGAGTTTGTGGGACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp AAACTGTCTCCTCTAGGGGTCAGGTCAAAACTGTCCCTCCATAGGTCTCCTCCACAGAGCCATCCTTCATaGGTTTCAGCTCCTCAGGGC +
Preference number: 4 (lower is better)
Translates to: KLSPLGVRSKLSLHRSPPQSHPS*VSAPQG
Trigger: GCCCTGAGGAGCTGAAACCCATGAAGGATGGCTCTG...TGGAGGAGACCTATGGAGGGACAGTTTTGACCTGACCCCTAGAGGAGACAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp TTGCCCAAAGCTTCCAATGCCTTGCCAAGCTCCCAGCCTCACCTTTTAACACTTAGATGGTGCTCGAAGTaGCATCGTAGGGCAGGGGCA +
Preference number: 4 (lower is better)
Translates to: LPKASNALPSSQPHLLTLRWCSK*HRRAGA
Trigger: TGCCCCTGCCCTACGATGCCACTTCGAGCACCATCT...AAGTGTTAAAAGGTGAGGCTGGGAGCTTGGCAAGGCATTGGAAGCTTTGGGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313400.9
CDS-3UTR CCA 90 bp AGAGAAGTCCTTAAAGACCCATGCTTCCTCACTGCAACCATCCTCAGAGCTTCCAGATGGTGCTCGAAGTaGCATCGTAGGGCAGGGGCA +
Preference number: 4 (lower is better)
Translates to: REVLKDPCFLTATILRASRWCSK*HRRAGA
Trigger: TGCCCCTGCCCTACGATGCCACTTCGAGCACCATCT...GGAAGCTCTGAGGATGGTTGCAGTGAGGAAGCATGGGTCTTTAAGGACTTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp TGTCCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTGTCCCTAAAGGTCATCTaGAAGACTTGGCCTTGGTTC +
Preference number: 4 (lower is better)
Translates to: CPSIGLLQGSMAGRKQSVSLKVI*KTWPWF
Trigger: GAACCAAGGCCAAGTCTTCCAGATGACCTTTAGGGA...CACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp TGTCCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTGCCCAGGCACCAAGGTTaGAAGAATCTCTTTCTGCTT +
Preference number: 4 (lower is better)
Translates to: CPSIGLLQGSMAGRKQSVPRHQG*KNLFLL
Trigger: AAGCAGAAAGAGATTCTTCCAACCTTGGTGCCTGGG...CACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313400.9
CDS-3UTR CCA 90 bp AGAAAGCGGCAGAGCCCAGGGTTGCACAGTGAGCTTATTAGCAGCACCAGGATAGGAGACATTACTGAGTaGATTGCCTGGCCTCTGTGG +
Preference number: 4 (lower is better)
Translates to: RKRQSPGLHSELISSTRIGDITE*IAWPLW
Trigger: CCACAGAGGCCAGGCAATCCACTCAGTAATGTCTCC...TATCCTGGTGCTGCTAATAAGCTCACTGTGCAACCCTGGGCTCTGCCGCTTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417725.1
CDS-3UTR CCA 90 bp CTGAGGGCCAGAAAGCGGCAGAGCCCAGGGTTGCACAGTGAGCTTATTAGCAGCGCTGACATATCAGTGTaGGATGTTGGAGCAATCTCA +
Preference number: 4 (lower is better)
Translates to: LRARKRQSPGLHSELISSADISV*DVGAIS
Trigger: TGAGATTGCTCCAACATCCCACACTGATATGTCAGC...GCTGCTAATAAGCTCACTGTGCAACCCTGGGCTCTGCCGCTTTCTGGCCCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417725.1
CDS-3UTR TCA 90 bp CCTCAGAGCTTCCTTCCTGGTGCTGAAGAGGTCAAAACTGTCTCCTCTAGGGGTTCTCCACACCTGAAATaGGCTGGTCATCTGACAGCA +
Preference number: 4 (lower is better)
Translates to: PQSFLPGAEEVKTVSSRGSPHLK*AGHLTA
Trigger: TGCTGTCAGATGACCAGCTCATTTCAGGTGTGGAGA...ACCCCTAGAGGAGACAGTTTTGACCTCTTCAGCACCAGGAAGGAAGCTCTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR TCA 90 bp CCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTGGCAACACTTGAAGATGACTaGGTAGATACTGACTTCAGG +
Preference number: 4 (lower is better)
Translates to: PSIGLLQGSMAGRKQSVATLEDD*VDTDFR
Trigger: CCTGAAGTCAGTATCTACTCAGTCATCTTCAAGTGT...TGCCACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR TCA 90 bp GCAAAGGCCGCTTGGTCTCCACCTGAAAACTTCTGCCTCGGGATTGACAGCCATCTTCTGCCTCGGGATTaGCAGCCATCCATAAGAAAA +
Preference number: 4 (lower is better)
Translates to: AKAAWSPPENFCLGIDSHLLPRD*QPSIRK
Trigger: TTTTCTTATGGATGGCTGTCAATCCCGAGGCAGAAG...ATGGCTGTCAATCCCGAGGCAGAAGTTTTCAGGTGGAGACCAAGCGGCCTTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR TCA 90 bp CAGAGCTTCCTTCCTGGTGCTGAAGAGGTCAAAACTGTCTCCTCTAGGGGTCAGCTTCCTTCCTGGTGCTaGAGAGGTCAAAACTGTCTC +
Preference number: 4 (lower is better)
Translates to: QSFLPGAEEVKTVSSRGQLPSWC*RGQNCL
Trigger: GAGACAGTTTTGACCTCTTCAGCACCAGGAAGGAAG...CTGACCCCTAGAGGAGACAGTTTTGACCTCTTCAGCACCAGGAAGGAAGCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR TCA 90 bp ATCCACAGGAGAAACCGTTTGCTTTGGCCTTGCTGGCAAGCTTCATCTGCTAGGCGCGGAAACTCTCCTTaGACTTCTGCATCAGGGACT +
Preference number: 4 (lower is better)
Translates to: IHRRNRLLWPCWQASSARRGNSP*TSASGT
Trigger: AGTCCCTGATGCAGAAGTTCAAGGAGAGTTTCCGCG...CCTAGCAGATGAAGCTTGCCAGCAAGGCCAAAGCAAACGGTTTCTCCTGTGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313400.9
ENST00000373986.7
CDS-3UTR TCA 90 bp ATCCACAGGAGAAACCGTTTGCTTTGGCCTTGCTGGCAAGCTTCATCTGCTAGGCCACAAAGCTTTTGCTaGCAGGAAGCCAGAGGCCTT +
Preference number: 4 (lower is better)
Translates to: IHRRNRLLWPCWQASSARPQSFC*QEARGL
Trigger: AAGGCCTCTGGCTTCCTGTCAGCAAAAGCTTTGTGG...CCTAGCAGATGAAGCTTGCCAGCAAGGCCAAAGCAAACGGTTTCTCCTGTGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR TCA 90 bp AAACTGTCTCCTCTAGGGGTCAGGTCAAAACTGTCCCTCCATAGGTCTCCTCCATCTGTGGTCTCTTTCTaGTACTGGAGCCACAGCTGC +
Preference number: 4 (lower is better)
Translates to: KLSPLGVRSKLSLHRSPPSVVSF*YWSHSC
Trigger: GCAGCTGTGGCTCCAGTATCAGAAAGAGACCACAGA...TGGAGGAGACCTATGGAGGGACAGTTTTGACCTGACCCCTAGAGGAGACAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR TCA 90 bp CCTCAGAGCTTCCTTCCTGGTGCTGAAGAGGTCAAAACTGTCTCCTCTAGGGGTTGTGTTTCGGGCCATTaGCACCATCTTCTCCTCACA +
Preference number: 4 (lower is better)
Translates to: PQSFLPGAEEVKTVSSRGCVSGH*HHLLLT
Trigger: TGTGAGGAGAAGATGGTGTCAATGGCCCGAAACACA...ACCCCTAGAGGAGACAGTTTTGACCTCTTCAGCACCAGGAAGGAAGCTCTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341734.8
CDS-3UTR TCA 90 bp AGACTGAGGGCCAGAAAGCGGCAGAGCCCAGGGTTGCACAGTGAGCTTATTAGCTTCCTTGATTCCTGCTaGCATATCAGTGTGGGATGT +
Preference number: 4 (lower is better)
Translates to: RLRARKRQSPGLHSELISFLDSC*HISVGC
Trigger: ACATCCCACACTGATATGTCAGCAGGAATCAAGGAA...GCTAATAAGCTCACTGTGCAACCCTGGGCTCTGCCGCTTTCTGGCCCTCAGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417725.1
CDS-3UTR GCA 90 bp AAACTGTCTCCTCTAGGGGTCAGGTCAAAACTGTCCCTCCATAGGTCTCCTCCAATGGCTTCGACCAGCTaGTACACAAGATGTGCCCAG +
Preference number: 4 (lower is better)
Translates to: KLSPLGVRSKLSLHRSPPMASTS*YTRCAQ
Trigger: CTGGGCACATCTTGTGTAGCAGCTGGTCGAAGCCAT...TGGAGGAGACCTATGGAGGGACAGTTTTGACCTGACCCCTAGAGGAGACAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp GGGTCAGGTCAAAACTGTCCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAGTCAGCTATTTCTTCTaGCTTGTTGTCATCTACCAG +
Preference number: 4 (lower is better)
Translates to: GSGQNCPSIGLLQGSMAGVSYFF*LVVIYQ
Trigger: CTGGTAGATGACAACAAGGCAGAAGAAATAGCTGAC...TCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGGACAGTTTTGACCTGACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp AGAAGAGCAAAGGCCGCTTGGTCTCCACCTGAAAACTTCTGCCTCGGGATTGACACAGGAGAAACCGTTTaGTTTGGCCTTGCTGGCAAG +
Preference number: 4 (lower is better)
Translates to: RRAKAAWSPPENFCLGIDTGETV*FGLAGK
Trigger: CTTGCCAGCAAGGCCAAAGCAAACGGTTTCTCCTGT...GTCAATCCCGAGGCAGAAGTTTTCAGGTGGAGACCAAGCGGCCTTTGCTCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp CCTCAGAGCTTCCTTCCTGGTGCTGAAGAGGTCAAAACTGTCTCCTCTAGGGGTCCACCTGAAAACTTCTaGCTCGGGATTGACAGCCAT +
Preference number: 4 (lower is better)
Translates to: PQSFLPGAEEVKTVSSRGPPENF*LGIDSH
Trigger: ATGGCTGTCAATCCCGAGGCAGAAGTTTTCAGGTGG...ACCCCTAGAGGAGACAGTTTTGACCTCTTCAGCACCAGGAAGGAAGCTCTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp AGGAGAAACCGTTTGCTTTGGCCTTGCTGGCAAGCTTCATCTGCTAGGCCCATCAGTCGCCTCAGCTGCTaGTTTCTTCTCAAAGTCCAC +
Preference number: 4 (lower is better)
Translates to: RRNRLLWPCWQASSARPISRLSC*FLLKVH
Trigger: GTGGACTTTGAGAAGAAAGCAGCAGCTGAGGCGACT...GATGGGCCTAGCAGATGAAGCTTGCCAGCAAGGCCAAAGCAAACGGTTTCTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313400.9
ENST00000373986.7
CDS-3UTR GCA 90 bp AGGAGAAACCGTTTGCTTTGGCCTTGCTGGCAAGCTTCATCTGCTAGGCCCATCCTGAGTCGCCTCAGCTaGTGCTTTCTTCTCAAAGTC +
Preference number: 4 (lower is better)
Translates to: RRNRLLWPCWQASSARPILSRLS*CFLLKV
Trigger: GACTTTGAGAAGAAAGCAGCAGCTGAGGCGACTCAG...GATGGGCCTAGCAGATGAAGCTTGCCAGCAAGGCCAAAGCAAACGGTTTCTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313400.9
ENST00000373986.7
CDS-3UTR GCA 90 bp ATCCACAGGAGAAACCGTTTGCTTTGGCCTTGCTGGCAAGCTTCATCTGCTAGGAAGTGCTCGGGCACATaGAGAGTCACCTTCACAGTG +
Preference number: 4 (lower is better)
Translates to: IHRRNRLLWPCWQASSARKCSGT*RVTFTV
Trigger: CACTGTGAAGGTGACTCTGCATGTGCCCGAGCACTT...CCTAGCAGATGAAGCTTGCCAGCAAGGCCAAAGCAAACGGTTTCTCCTGTGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp AGAGAAGTCCTTAAAGACCCATGCTTCCTCACTGCAACCATCCTCAGAGCTTCCTACTGGAGCCACAGCTaGTGCTGGACCTTCTTGCTG +
Preference number: 4 (lower is better)
Translates to: REVLKDPCFLTATILRASYWSHS*CWTFLL
Trigger: CAGCAAGAAGGTCCAGCAGCAGCTGTGGCTCCAGTA...GGAAGCTCTGAGGATGGTTGCAGTGAGGAAGCATGGGTCTTTAAGGACTTCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp CCTCAGAGCTTCCTTCCTGGTGCTGAAGAGGTCAAAACTGTCTCCTCTAGGGGTTCCATGTCAGTTCACTaGAAACTCTGCCTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: PQSFLPGAEEVKTVSSRGSMSVH*KLCLPG
Trigger: ACCTGGGAGGCAGAGTTTGCAGTGAACTGACATGGA...ACCCCTAGAGGAGACAGTTTTGACCTCTTCAGCACCAGGAAGGAAGCTCTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313400.9
CDS-3UTR CCA 90 bp AAACTGTCCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGACACCTGAAATGAGCTaGTCATCTGACAGCATCTGG +
Preference number: 4 (lower is better)
Translates to: KLSLHRSPPGVHGRKKAETPEMS*SSDSIW
Trigger: CCAGATGCTGTCAGATGACCAGCTCATTTCAGGTGT...CTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGGACAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp GGTCTCCACCTGAAAACTTCTGCCTCGGGATTGACAGCCATCCATAAGAAAAGGAAGGTGACAGGTAGATaGACAGCGCCCCTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: GLHLKTSASGLTAIHKKRKVTGR*TAPLLL
Trigger: GAGGAGAAGGGGCGCTGTCCATCTACCTGTCACCTT...CCTTTTCTTATGGATGGCTGTCAATCCCGAGGCAGAAGTTTTCAGGTGGAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp TGTCCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTGGATGAGGGTATAAAGTaGCACCACACGGTTGATTTC +
Preference number: 4 (lower is better)
Translates to: CPSIGLLQGSMAGRKQSVDEGIK*HHTVDF
Trigger: GAAATCAACCGTGTGGTGCCACTTTATACCCTCATC...CACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp AAGAGAGAGAAGTCCTTAAAGACCCATGCTTCCTCACTGCAACCATCCTCAGAGGAAGGGGGCTGCAGTTaGGGAGCCCATTGGCATCAA +
Preference number: 4 (lower is better)
Translates to: KREKSLKTHASSLQPSSEEGGCS*GAHWHQ
Trigger: TTGATGCCAATGGGCTCCCCAACTGCAGCCCCCTTC...CTCTGAGGATGGTTGCAGTGAGGAAGCATGGGTCTTTAAGGACTTCTCTCTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp AAGAGAGAGAAGTCCTTAAAGACCCATGCTTCCTCACTGCAACCATCCTCAGAGAGGAGACCACAGTACTaGAGGGCTCCACTGTTGGGG +
Preference number: 4 (lower is better)
Translates to: KREKSLKTHASSLQPSSERRPQY*RAPLLG
Trigger: CCCCAACAGTGGAGCCCTCCAGTACTGTGGTCTCCT...CTCTGAGGATGGTTGCAGTGAGGAAGCATGGGTCTTTAAGGACTTCTCTCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp AGAGAAGTCCTTAAAGACCCATGCTTCCTCACTGCAACCATCCTCAGAGCTTCCGTTGTCATCTACCAGTaGACAGGCCGTCCTCAGGGT +
Preference number: 4 (lower is better)
Translates to: REVLKDPCFLTATILRASVVIYQ*TGRPQG
Trigger: ACCCTGAGGACGGCCTGTCCACTGGTAGATGACAAC...GGAAGCTCTGAGGATGGTTGCAGTGAGGAAGCATGGGTCTTTAAGGACTTCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp TTGCCCAAAGCTTCCAATGCCTTGCCAAGCTCCCAGCCTCACCTTTTAACACTTGTTGTCATCTACCAGTaGACAGGCCGTCCTCAGGGT +
Preference number: 4 (lower is better)
Translates to: LPKASNALPSSQPHLLTLVVIYQ*TGRPQG
Trigger: ACCCTGAGGACGGCCTGTCCACTGGTAGATGACAAC...AAGTGTTAAAAGGTGAGGCTGGGAGCTTGGCAAGGCATTGGAAGCTTTGGGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313400.9
CDS-3UTR CCA 90 bp CTCAGAGCTTCCTTCCTGGTGCTGAAGAGGTCAAAACTGTCTCCTCTAGGGGTCAGAGCAAAGGCCGCTTaGTCTCCACCTGAAAACTTC +
Preference number: 4 (lower is better)
Translates to: LRASFLVLKRSKLSPLGVRAKAA*SPPENF
Trigger: GAAGTTTTCAGGTGGAGACCAAGCGGCCTTTGCTCT...GACCCCTAGAGGAGACAGTTTTGACCTCTTCAGCACCAGGAAGGAAGCTCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp CCTCAGAGCTTCCTTCCTGGTGCTGAAGAGGTCAAAACTGTCTCCTCTAGGGGTAGAGCAAAGGCCGCTTaGTCTCCACCTGAAAACTTC +
Preference number: 4 (lower is better)
Translates to: PQSFLPGAEEVKTVSSRGRAKAA*SPPENF
Trigger: GAAGTTTTCAGGTGGAGACCAAGCGGCCTTTGCTCT...ACCCCTAGAGGAGACAGTTTTGACCTCTTCAGCACCAGGAAGGAAGCTCTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp TCAGGTCAAAACTGTCCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAGGAATTTTTAATGCATaGACAGGCCTGCAGGGACTC +
Preference number: 4 (lower is better)
Translates to: SGQNCPSIGLLQGSMAGRGIFNA*TGLQGL
Trigger: GAGTCCCTGCAGGCCTGTCCATGCATTAAAAATTCC...TCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGGACAGTTTTGACCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp CAGAGCTTCCTTCCTGGTGCTGAAGAGGTCAAAACTGTCTCCTCTAGGGGTCAGAGTGGATCTCATGAGTaGCTTCTGTGCTTGCGCTCT +
Preference number: 4 (lower is better)
Translates to: QSFLPGAEEVKTVSSRGQSGSHE*LLCLRS
Trigger: AGAGCGCAAGCACAGAAGCCACTCATGAGATCCACT...CTGACCCCTAGAGGAGACAGTTTTGACCTCTTCAGCACCAGGAAGGAAGCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313400.9
ENST00000361209.6
CDS-3UTR CCA 90 bp GGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCCCACAAACTCAATAATGTCCTCCCTAAAGGTCATCTaGAAGACTTGGCCTTGGTTC +
Preference number: 4 (lower is better)
Translates to: GRPTGSRKRQGPTNSIMSSLKVI*KTWPWF
Trigger: GAACCAAGGCCAAGTCTTCCAGATGACCTTTAGGGA...GGACATTATTGAGTTTGTGGGACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp AGAGAAGTCCTTAAAGACCCATGCTTCCTCACTGCAACCATCCTCAGAGCTTCCAGCCCATCGGCCAGCTaGGGAAAGTCCTTGATGAAG +
Preference number: 4 (lower is better)
Translates to: REVLKDPCFLTATILRASSPSAS*GKSLMK
Trigger: CTTCATCAAGGACTTTCCCCAGCTGGCCGATGGGCT...GGAAGCTCTGAGGATGGTTGCAGTGAGGAAGCATGGGTCTTTAAGGACTTCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp AAACTGTCCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTTCTTGCTGGGAAAGTaGATGATGCAGGTGAGCTCT +
Preference number: 4 (lower is better)
Translates to: KLSLHRSPPGVHGRKKAEFLLGK*MMQVSS
Trigger: AGAGCTCACCTGCATCATCCACTTTCCCAGCAAGAA...CTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGGACAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp TGTCCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTGAATTGTTCCTCGGGTTaGGTCAAGACAATGGAAAGC +
Preference number: 4 (lower is better)
Translates to: CPSIGLLQGSMAGRKQSVNCSSG*VKTMES
Trigger: GCTTTCCATTGTCTTGACCCAACCCGAGGAACAATT...CACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313400.9
CDS-3UTR TCA 90 bp GGTCTCCACCTGAAAACTTCTGCCTCGGGATTGACAGCCATCCATAAGAAAAGGAATGAGCTGGTCATCTaGCAGCATCTGGGCTGTCAG +
Preference number: 4 (lower is better)
Translates to: GLHLKTSASGLTAIHKKRNELVI*QHLGCQ
Trigger: CTGACAGCCCAGATGCTGTCAGATGACCAGCTCATT...CCTTTTCTTATGGATGGCTGTCAATCCCGAGGCAGAAGTTTTCAGGTGGAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR TCA 90 bp AAACTGTCTCCTCTAGGGGTCAGGTCAAAACTGTCCCTCCATAGGTCTCCTCCATCTCCACACCTGAAATaGGCTGGTCATCTGACAGCA +
Preference number: 4 (lower is better)
Translates to: KLSPLGVRSKLSLHRSPPSPHLK*AGHLTA
Trigger: TGCTGTCAGATGACCAGCTCATTTCAGGTGTGGAGA...TGGAGGAGACCTATGGAGGGACAGTTTTGACCTGACCCCTAGAGGAGACAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR TCA 90 bp AAGAGAGAGAAGTCCTTAAAGACCCATGCTTCCTCACTGCAACCATCCTCAGAGGTCCCAATAGCTGGCTaGACATCCACCCACTCCAAG +
Preference number: 4 (lower is better)
Translates to: KREKSLKTHASSLQPSSEVPIAG*TSTHSK
Trigger: CTTGGAGTGGGTGGATGTTCAGCCAGCTATTGGGAC...CTCTGAGGATGGTTGCAGTGAGGAAGCATGGGTCTTTAAGGACTTCTCTCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR TCA 90 bp TGTCCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTGACACTTGAAGATGACTaGGTAGATACTGACTTCAGG +
Preference number: 4 (lower is better)
Translates to: CPSIGLLQGSMAGRKQSVTLEDD*VDTDFR
Trigger: CCTGAAGTCAGTATCTACTCAGTCATCTTCAAGTGT...CACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR TCA 90 bp GGTCTCCACCTGAAAACTTCTGCCTCGGGATTGACAGCCATCCATAAGAAAAGGGAACAGCATCGAGGCTaGGACCTCCATCAGTGTGTT +
Preference number: 4 (lower is better)
Translates to: GLHLKTSASGLTAIHKKREQHRG*DLHQCV
Trigger: AACACACTGATGGAGGTCTCAGCCTCGATGCTGTTC...CCTTTTCTTATGGATGGCTGTCAATCCCGAGGCAGAAGTTTTCAGGTGGAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR TCA 90 bp AGAAGAGCAAAGGCCGCTTGGTCTCCACCTGAAAACTTCTGCCTCGGGATTGACCTTCTGCCTCGGGATTaGCAGCCATCCATAAGAAAA +
Preference number: 4 (lower is better)
Translates to: RRAKAAWSPPENFCLGIDLLPRD*QPSIRK
Trigger: TTTTCTTATGGATGGCTGTCAATCCCGAGGCAGAAG...GTCAATCCCGAGGCAGAAGTTTTCAGGTGGAGACCAAGCGGCCTTTGCTCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR TCA 90 bp CTCAGAGCTTCCTTCCTGGTGCTGAAGAGGTCAAAACTGTCTCCTCTAGGGGTCATGGGGAGGTGGCATTaGTCTGGTAATACAGGGAAA +
Preference number: 4 (lower is better)
Translates to: LRASFLVLKRSKLSPLGVMGRWH*SGNTGK
Trigger: TTTCCCTGTATTACCAGATCAATGCCACCTCCCCAT...GACCCCTAGAGGAGACAGTTTTGACCTCTTCAGCACCAGGAAGGAAGCTCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp ATGGAAACAAAACAGAGCCTTTGCAGCAGACTAGAAATAGAAGATACCTTCTTCAGGAAAGCTCACCCCTaGAGGGCCGCCTTGCCCCGC +
Preference number: 4 (lower is better)
Translates to: METKQSLCSRLEIEDTFFRKAHP*RAALPR
Trigger: GCGGGGCAAGGCGGCCCTGCAGGGGTGAGCTTTCCT...GAAGAAGGTATCTTCTATTTCTAGTCTGCTGCAAAGGCTCTGTTTTGTTTCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000358637.4
CDS-3UTR GCA 90 bp AAAAATGATAAAGGGGATATCACCACCGATCCCACAGAAATACAAACTACCATTGGTGTGGGGCTCAGCTaGTCCTTGCCTGGCCGGCGG +
Preference number: 4 (lower is better)
Translates to: KNDKGDITTDPTEIQTTIGVGLS*SLPGRR
Trigger: CCGCCGGCCAGGCAAGGAGCAGCTGAGCCCCACACC...AATGGTAGTTTGTATTTCTGTGGGATCGGTGGTGATATCCCCTTTATCATTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000358637.4
CDS-3UTR GCA 90 bp AAACTGTCTCCTCTAGGGGTCAGGTCAAAACTGTCCCTCCATAGGTCTCCTCCACCACCTGAAAACTTCTaGCTCGGGATTGACAGCCAT +
Preference number: 4 (lower is better)
Translates to: KLSPLGVRSKLSLHRSPPPPENF*LGIDSH
Trigger: ATGGCTGTCAATCCCGAGGCAGAAGTTTTCAGGTGG...TGGAGGAGACCTATGGAGGGACAGTTTTGACCTGACCCCTAGAGGAGACAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp GGTCTCCACCTGAAAACTTCTGCCTCGGGATTGACAGCCATCCATAAGAAAAGGCCATCTGCTATGAAGTaGTCGGGCACATGCAGAGTC +
Preference number: 4 (lower is better)
Translates to: GLHLKTSASGLTAIHKKRPSAMK*SGTCRV
Trigger: GACTCTGCATGTGCCCGAGCACTTCATAGCAGATGG...CCTTTTCTTATGGATGGCTGTCAATCCCGAGGCAGAAGTTTTCAGGTGGAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp AAACTGTCTCCTCTAGGGGTCAGGTCAAAACTGTCCCTCCATAGGTCTCCTCCACATCAGAGCAGTCAATaGCTTTGGAGTGGTCGTAGC +
Preference number: 4 (lower is better)
Translates to: KLSPLGVRSKLSLHRSPPHQSSQ*LWSGRS
Trigger: GCTACGACCACTCCAAAGGCATTGACTGCTCTGATG...TGGAGGAGACCTATGGAGGGACAGTTTTGACCTGACCCCTAGAGGAGACAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp CTCAGAGCTTCCTTCCTGGTGCTGAAGAGGTCAAAACTGTCTCCTCTAGGGGTCGTTCACTGCAAACTCTaGCTCCCAGGTTCAAGCAAT +
Preference number: 4 (lower is better)
Translates to: LRASFLVLKRSKLSPLGVVHCKL*LPGSSN
Trigger: ATTGCTTGAACCTGGGAGGCAGAGTTTGCAGTGAAC...GACCCCTAGAGGAGACAGTTTTGACCTCTTCAGCACCAGGAAGGAAGCTCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313400.9
CDS-3UTR GCA 90 bp CCTCAGAGCTTCCTTCCTGGTGCTGAAGAGGTCAAAACTGTCTCCTCTAGGGGTCAGCATCAAGCTTCTTaGCCAAAGCTTCCAATGCCT +
Preference number: 4 (lower is better)
Translates to: PQSFLPGAEEVKTVSSRGQHQAS*PKLPMP
Trigger: AGGCATTGGAAGCTTTGGGCAAGAAGCTTGATGCTG...ACCCCTAGAGGAGACAGTTTTGACCTCTTCAGCACCAGGAAGGAAGCTCTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313400.9
CDS-3UTR GCA 90 bp GGCCCCAGGATCCAGGAGAATACTGCTCCCCCTCCCATGGAGAGTCTCTGTGCTGTACACTGGAAGCAGTaGAATTACCATTTAAAAGGA +
Preference number: 4 (lower is better)
Translates to: GPRIQENTAPPPMESLCAVHWKQ*NYHLKG
Trigger: TCCTTTTAAATGGTAATTGCACTGCTTCCAGTGTAC...AGCACAGAGACTCTCCATGGGAGGGGGAGCAGTATTCTCCTGGATCCTGGGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000313400.9
CDS-3UTR GCA 90 bp TGTCCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTGCACCAGCACATTGAGTaGTGTAATTTTCTGCAACTG +
Preference number: 4 (lower is better)
Translates to: CPSIGLLQGSMAGRKQSVHQHIE*CNFLQL
Trigger: CAGTTGCAGAAAATTACAGCACTCAATGTGCTGGTG...CACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313400.9
CDS-3UTR CCA 90 bp CAATGGCACCCCTCTCTTTGGGGCCTTCTCCAATCCATCCTTCACCCTGTAGTGGATGAGGGTATAAAGTaGCACCACACGGTTGATTTC +
Preference number: 4 (lower is better)
Translates to: QWHPSLWGLLQSILHPVVDEGIK*HHTVDF
Trigger: GAAATCAACCGTGTGGTGCCACTTTATACCCTCATC...CACTACAGGGTGAAGGATGGATTGGAGAAGGCCCCAAAGAGAGGGGTGCCATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313400.9
CDS-3UTR CCA 90 bp AAACTGTCCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGGATGAGGGTATAAAGTaGCACCACACGGTTGATTTC +
Preference number: 4 (lower is better)
Translates to: KLSLHRSPPGVHGRKKAEDEGIK*HHTVDF
Trigger: GAAATCAACCGTGTGGTGCCACTTTATACCCTCATC...CTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGGACAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp GGTCTCCACCTGAAAACTTCTGCCTCGGGATTGACAGCCATCCATAAGAAAAGGCTTGGTCCCAATAGCTaGCTGAACATCCACCCACTC +
Preference number: 4 (lower is better)
Translates to: GLHLKTSASGLTAIHKKRLGPNS*LNIHPL
Trigger: GAGTGGGTGGATGTTCAGCCAGCTATTGGGACCAAG...CCTTTTCTTATGGATGGCTGTCAATCCCGAGGCAGAAGTTTTCAGGTGGAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp AGAGAAGTCCTTAAAGACCCATGCTTCCTCACTGCAACCATCCTCAGAGCTTCCCTTGGTCCCAATAGCTaGCTGAACATCCACCCACTC +
Preference number: 4 (lower is better)
Translates to: REVLKDPCFLTATILRASLGPNS*LNIHPL
Trigger: GAGTGGGTGGATGTTCAGCCAGCTATTGGGACCAAG...GGAAGCTCTGAGGATGGTTGCAGTGAGGAAGCATGGGTCTTTAAGGACTTCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp AGAAGAGCAAAGGCCGCTTGGTCTCCACCTGAAAACTTCTGCCTCGGGATTGACGGAATTTTTAATGCATaGACAGGCCTGCAGGGACTC +
Preference number: 4 (lower is better)
Translates to: RRAKAAWSPPENFCLGIDGIFNA*TGLQGL
Trigger: GAGTCCCTGCAGGCCTGTCCATGCATTAAAAATTCC...GTCAATCCCGAGGCAGAAGTTTTCAGGTGGAGACCAAGCGGCCTTTGCTCTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp AAACTGTCTCCTCTAGGGGTCAGGTCAAAACTGTCCCTCCATAGGTCTCCTCCACCCATCACAGAAATGTaGAGGATGTGCATCTGCTCC +
Preference number: 4 (lower is better)
Translates to: KLSPLGVRSKLSLHRSPPPITEM*RMCICS
Trigger: GGAGCAGATGCACATCCTCCACATTTCTGTGATGGG...TGGAGGAGACCTATGGAGGGACAGTTTTGACCTGACCCCTAGAGGAGACAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313400.9
ENST00000361209.6
CDS-3UTR CCA 90 bp ATCCACAGGAGAAACCGTTTGCTTTGGCCTTGCTGGCAAGCTTCATCTGCTAGGCCCATCACAGAAATGTaGAGGATGTGCATCTGCTCC +
Preference number: 4 (lower is better)
Translates to: IHRRNRLLWPCWQASSARPITEM*RMCICS
Trigger: GGAGCAGATGCACATCCTCCACATTTCTGTGATGGG...CCTAGCAGATGAAGCTTGCCAGCAAGGCCAAAGCAAACGGTTTCTCCTGTGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313400.9
ENST00000361209.6
CDS-3UTR CCA 90 bp TGCGCTCAATATGTAGGTTATCAGGAAGGGGATTGTCAATCTCATCAACATTTGTCCTCGCGGGAGACATaGTTGGCCCGCCTAGGTGGC +
Preference number: 4 (lower is better)
Translates to: CAQYVGYQEGDCQSHQHLSSRET*LARLGG
Trigger: GCCACCTAGGCGGGCCAACCATGTCTCCCGCGAGGA...CAAATGTTGATGAGATTGACAATCCCCTTCCTGATAACCTACATATTGAGCGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313400.9
CDS-3UTR CCA 90 bp CAAAGGCCGCTTGGTCTCCACCTGAAAACTTCTGCCTCGGGATTGACAGCCATCGGCTGTCTTGTTCACTaGGCTTTTCAGCAAACCTTT +
Preference number: 4 (lower is better)
Translates to: QRPLGLHLKTSASGLTAIGCLVH*AFQQTF
Trigger: AAAGGTTTGCTGAAAAGCCCAGTGAACAAGACAGCC...GATGGCTGTCAATCCCGAGGCAGAAGTTTTCAGGTGGAGACCAAGCGGCCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp TCAGGTCAAAACTGTCCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGATGGTTTCAAAGTATGTaGACAGCATCGCTTCTTCCC +
Preference number: 4 (lower is better)
Translates to: SGQNCPSIGLLQGSMAGRWFQSM*TASLLP
Trigger: GGGAAGAAGCGATGCTGTCCACATACTTTGAAACCA...TCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGGACAGTTTTGACCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp TTGCCCAAAGCTTCCAATGCCTTGCCAAGCTCCCAGCCTCACCTTTTAACACTTAGCAGTCAATGCCTTTaGAGTGGTCGTAGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: LPKASNALPSSQPHLLTLSSQCL*SGRSSQ
Trigger: CTGGCTGCTACGACCACTCCAAAGGCATTGACTGCT...AAGTGTTAAAAGGTGAGGCTGGGAGCTTGGCAAGGCATTGGAAGCTTTGGGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313400.9
3UTR CAA 72 bp GCAGCATCAAGCTTCTTGCCCAAAGCTTCCAATGCCTaGCCAAGCTCCCAGCCTCACCTTTTAACACTTCCT +
Preference number: 4 (lower is better)
Translates to: AASSFLPKASNA*PSSQPHLLTLP
Trigger: AGGAAGTGTTAAAAGGTGAGGCTGGGAGCTTGGCAAGGCATTGGAAGCTTTGGGCAAGAAGCTTGATGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313400.9
CDS-3UTR TCA 90 bp AGGAGAAACCGTTTGCTTTGGCCTTGCTGGCAAGCTTCATCTGCTAGGCCCATCCCCAGAATGGAAGTTTaGTTTTTCCGTTGGCCCATT +
Preference number: 4 (lower is better)
Translates to: RRNRLLWPCWQASSARPIPRMEV*FFRWPI
Trigger: AATGGGCCAACGGAAAAATCAAACTTCCATTCTGGG...GATGGGCCTAGCAGATGAAGCTTGCCAGCAAGGCCAAAGCAAACGGTTTCTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000288520.9
CDS-3UTR TCA 90 bp AAGAGAGAGAAGTCCTTAAAGACCCATGCTTCCTCACTGCAACCATCCTCAGAGAATGAGCTGGTCATCTaGCAGCATCTGGGCTGTCAG +
Preference number: 4 (lower is better)
Translates to: KREKSLKTHASSLQPSSENELVI*QHLGCQ
Trigger: CTGACAGCCCAGATGCTGTCAGATGACCAGCTCATT...CTCTGAGGATGGTTGCAGTGAGGAAGCATGGGTCTTTAAGGACTTCTCTCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR TCA 90 bp ATCCACAGGAGAAACCGTTTGCTTTGGCCTTGCTGGCAAGCTTCATCTGCTAGGTGCCATTGTCTTGGATaGGGGTATAAAGTGGCACCA +
Preference number: 4 (lower is better)
Translates to: IHRRNRLLWPCWQASSARCHCLG*GYKVAP
Trigger: TGGTGCCACTTTATACCCTCATCCAAGACAATGGCA...CCTAGCAGATGAAGCTTGCCAGCAAGGCCAAAGCAAACGGTTTCTCCTGTGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR TCA 90 bp GGTCTCCACCTGAAAACTTCTGCCTCGGGATTGACAGCCATCCATAAGAAAAGGTCATCAGTGCACTCTTaGAGGCCTCCTTTGTGCCAT +
Preference number: 4 (lower is better)
Translates to: GLHLKTSASGLTAIHKKRSSVHS*RPPLCH
Trigger: ATGGCACAAAGGAGGCCTTCAAGAGTGCACTGATGA...CCTTTTCTTATGGATGGCTGTCAATCCCGAGGCAGAAGTTTTCAGGTGGAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR TCA 90 bp AAGAGAGAGAAGTCCTTAAAGACCCATGCTTCCTCACTGCAACCATCCTCAGAGGAACAGCATCGAGGCTaGGACCTCCATCAGTGTGTT +
Preference number: 4 (lower is better)
Translates to: KREKSLKTHASSLQPSSEEQHRG*DLHQCV
Trigger: AACACACTGATGGAGGTCTCAGCCTCGATGCTGTTC...CTCTGAGGATGGTTGCAGTGAGGAAGCATGGGTCTTTAAGGACTTCTCTCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR TCA 90 bp AAGAGAGAGAAGTCCTTAAAGACCCATGCTTCCTCACTGCAACCATCCTCAGAGTGCTTCCATCTGCTATaGAGTGCTCGGGCACATGCA +
Preference number: 4 (lower is better)
Translates to: KREKSLKTHASSLQPSSECFHLL*SARAHA
Trigger: TGCATGTGCCCGAGCACTTCATAGCAGATGGAAGCA...CTCTGAGGATGGTTGCAGTGAGGAAGCATGGGTCTTTAAGGACTTCTCTCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR TCA 90 bp GCTTCAAGGCAGCATCAAGCTTCTTGCCCAAAGCTTCCAATGCCTTGCCAAGCTATGGGGAGGTGGCATTaGTCTGGTAATACAGGGAAA +
Preference number: 4 (lower is better)
Translates to: ASRQHQASCPKLPMPCQAMGRWH*SGNTGK
Trigger: TTTCCCTGTATTACCAGATCAATGCCACCTCCCCAT...AGCTTGGCAAGGCATTGGAAGCTTTGGGCAAGAAGCTTGATGCTGCCTTGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313400.9
CDS-3UTR TCA 90 bp CACAGGAGAAACCGTTTGCTTTGGCCTTGCTGGCAAGCTTCATCTGCTAGGCCCAAGACAGCAGGTCATTaGTGGTTTCAAAGTATGTGG +
Preference number: 4 (lower is better)
Translates to: HRRNRLLWPCWQASSARPKTAGH*WFQSMW
Trigger: CCACATACTTTGAAACCATCAATGACCTGCTGTCTT...GGGCCTAGCAGATGAAGCTTGCCAGCAAGGCCAAAGCAAACGGTTTCTCCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR TCA 90 bp CCTCAGAGCTTCCTTCCTGGTGCTGAAGAGGTCAAAACTGTCTCCTCTAGGGGTTTAGAGCTTAGATTGTaGGAGGTTGAGAAGCTTCCC +
Preference number: 4 (lower is better)
Translates to: PQSFLPGAEEVKTVSSRGLELRL*EVEKLP
Trigger: GGGAAGCTTCTCAACCTCTCACAATCTAAGCTCTAA...ACCCCTAGAGGAGACAGTTTTGACCTCTTCAGCACCAGGAAGGAAGCTCTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313400.9
CDS-3UTR GCA 90 bp ACATACCAGAATCTCTGGGACACATTTAAAGCAGTGTGTAGAGGGAGATTTATAGGCTCAGCTGCTCCTTaGCTGGCCGGCGGCAAAGGT +
Preference number: 4 (lower is better)
Translates to: TYQNLWDTFKAVCRGRFIGSAAP*LAGGKG
Trigger: ACCTTTGCCGCCGGCCAGGCAAGGAGCAGCTGAGCC...TATAAATCTCCCTCTACACACTGCTTTAAATGTGTCCCAGAGATTCTGGTATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358637.4
CDS-3UTR GCA 90 bp AAACTGTCTCCTCTAGGGGTCAGGTCAAAACTGTCCCTCCATAGGTCTCCTCCAGTAGGAACTCATCAGTaGACTCTTGAAGGCCTCCTT +
Preference number: 4 (lower is better)
Translates to: KLSPLGVRSKLSLHRSPPVGTHQ*TLEGLL
Trigger: AAGGAGGCCTTCAAGAGTGCACTGATGAGTTCCTAC...TGGAGGAGACCTATGGAGGGACAGTTTTGACCTGACCCCTAGAGGAGACAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp GGTCTCCACCTGAAAACTTCTGCCTCGGGATTGACAGCCATCCATAAGAAAAGGCTGCTACACAAGATGTaGCCAGGCCAGAGAGTAAGT +
Preference number: 4 (lower is better)
Translates to: GLHLKTSASGLTAIHKKRLLHKM*PGQRVS
Trigger: ACTTACTCTCTGGCCTGGGCACATCTTGTGTAGCAG...CCTTTTCTTATGGATGGCTGTCAATCCCGAGGCAGAAGTTTTCAGGTGGAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp AAGAGAGAGAAGTCCTTAAAGACCCATGCTTCCTCACTGCAACCATCCTCAGAGGTGCTTAGCTCTGAGTaGCTCCCTCGTGTATCCACA +
Preference number: 4 (lower is better)
Translates to: KREKSLKTHASSLQPSSEVLSSE*LPRVST
Trigger: TGTGGATACACGAGGGAGGCACTCAGAGCTAAGCAC...CTCTGAGGATGGTTGCAGTGAGGAAGCATGGGTCTTTAAGGACTTCTCTCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp AGAGAAGTCCTTAAAGACCCATGCTTCCTCACTGCAACCATCCTCAGAGCTTCCACAGGAGAAACCGTTTaGTTTGGCCTTGCTGGCAAG +
Preference number: 4 (lower is better)
Translates to: REVLKDPCFLTATILRASTGETV*FGLAGK
Trigger: CTTGCCAGCAAGGCCAAAGCAAACGGTTTCTCCTGT...GGAAGCTCTGAGGATGGTTGCAGTGAGGAAGCATGGGTCTTTAAGGACTTCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp AGAGAAGTCCTTAAAGACCCATGCTTCCTCACTGCAACCATCCTCAGAGCTTCCCTCTCCTTGAACTTCTaGATCAGGGACTCCACTGTC +
Preference number: 4 (lower is better)
Translates to: REVLKDPCFLTATILRASLSLNF*IRDSTV
Trigger: GACAGTGGAGTCCCTGATGCAGAAGTTCAAGGAGAG...GGAAGCTCTGAGGATGGTTGCAGTGAGGAAGCATGGGTCTTTAAGGACTTCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313400.9
ENST00000373986.7
CDS-3UTR GCA 90 bp AAGAGAGAGAAGTCCTTAAAGACCCATGCTTCCTCACTGCAACCATCCTCAGAGAGCCTTCATGACAGCTaGACTCTCCGGTTTCTGGGT +
Preference number: 4 (lower is better)
Translates to: KREKSLKTHASSLQPSSESLHDS*TLRFLG
Trigger: ACCCAGAAACCGGAGAGTGCAGCTGTCATGAAGGCT...CTCTGAGGATGGTTGCAGTGAGGAAGCATGGGTCTTTAAGGACTTCTCTCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp GCTTCAAGGCAGCATCAAGCTTCTTGCCCAAAGCTTCCAATGCCTTGCCAAGCTGTCTTTAGTTGCATATaGTCTGTGACTGGCACAGGG +
Preference number: 4 (lower is better)
Translates to: ASRQHQASCPKLPMPCQAVFSCI*SVTGTG
Trigger: CCCTGTGCCAGTCACAGAGCATATGCAACTAAAGAC...AGCTTGGCAAGGCATTGGAAGCTTTGGGCAAGAAGCTTGATGCTGCCTTGAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313400.9
CDS-3UTR CCA 90 bp AAAAATGATAAAGGGGATATCACCACCGATCCCACAGAAATACAAACTACCATTGGAGGGCTCCACTGTTaGGGACAGCCGCAGCACCGG +
Preference number: 4 (lower is better)
Translates to: KNDKGDITTDPTEIQTTIGGLHC*GQPQHR
Trigger: CCGGTGCTGCGGCTGTCCCCAACAGTGGAGCCCTCC...AATGGTAGTTTGTATTTCTGTGGGATCGGTGGTGATATCCCCTTTATCATTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358637.4
CDS-3UTR CCA 90 bp TGCGCTCAATATGTAGGTTATCAGGAAGGGGATTGTCAATCTCATCAACATTTGCACTCCGCAGGAGGCTaGAGCAGTGGCTACTCACCC +
Preference number: 4 (lower is better)
Translates to: CAQYVGYQEGDCQSHQHLHSAGG*SSGYSP
Trigger: GGGTGAGTAGCCACTGCTCCAGCCTCCTGCGGAGTG...CAAATGTTGATGAGATTGACAATCCCCTTCCTGATAACCTACATATTGAGCGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313400.9
CDS-3UTR CCA 90 bp AGAGAAGTCCTTAAAGACCCATGCTTCCTCACTGCAACCATCCTCAGAGCTTCCTTGCTTTGGCCTTGCTaGCAAGCTTCATCTGCTAGG +
Preference number: 4 (lower is better)
Translates to: REVLKDPCFLTATILRASLLWPC*QASSAR
Trigger: CCTAGCAGATGAAGCTTGCCAGCAAGGCCAAAGCAA...GGAAGCTCTGAGGATGGTTGCAGTGAGGAAGCATGGGTCTTTAAGGACTTCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp GGTCTCCACCTGAAAACTTCTGCCTCGGGATTGACAGCCATCCATAAGAAAAGGTTGCTTTGGCCTTGCTaGCAAGCTTCATCTGCTAGG +
Preference number: 4 (lower is better)
Translates to: GLHLKTSASGLTAIHKKRLLWPC*QASSAR
Trigger: CCTAGCAGATGAAGCTTGCCAGCAAGGCCAAAGCAA...CCTTTTCTTATGGATGGCTGTCAATCCCGAGGCAGAAGTTTTCAGGTGGAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp AAACTGTCTCCTCTAGGGGTCAGGTCAAAACTGTCCCTCCATAGGTCTCCTCCAAGAAACCGTTTGCTTTaGCCTTGCTGGCAAGCTTCA +
Preference number: 4 (lower is better)
Translates to: KLSPLGVRSKLSLHRSPPRNRLL*PCWQAS
Trigger: TGAAGCTTGCCAGCAAGGCCAAAGCAAACGGTTTCT...TGGAGGAGACCTATGGAGGGACAGTTTTGACCTGACCCCTAGAGGAGACAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp ATCCACAGGAGAAACCGTTTGCTTTGGCCTTGCTGGCAAGCTTCATCTGCTAGGAGAAACCGTTTGCTTTaGCCTTGCTGGCAAGCTTCA +
Preference number: 4 (lower is better)
Translates to: IHRRNRLLWPCWQASSARRNRLL*PCWQAS
Trigger: TGAAGCTTGCCAGCAAGGCCAAAGCAAACGGTTTCT...CCTAGCAGATGAAGCTTGCCAGCAAGGCCAAAGCAAACGGTTTCTCCTGTGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp AGAGAAGTCCTTAAAGACCCATGCTTCCTCACTGCAACCATCCTCAGAGCTTCCAGAGCAAAGGCCGCTTaGTCTCCACCTGAAAACTTC +
Preference number: 4 (lower is better)
Translates to: REVLKDPCFLTATILRASRAKAA*SPPENF
Trigger: GAAGTTTTCAGGTGGAGACCAAGCGGCCTTTGCTCT...GGAAGCTCTGAGGATGGTTGCAGTGAGGAAGCATGGGTCTTTAAGGACTTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp CCTCAGAGCTTCCTTCCTGGTGCTGAAGAGGTCAAAACTGTCTCCTCTAGGGGTTGGTTTCAAAGTATGTaGACAGCATCGCTTCTTCCC +
Preference number: 4 (lower is better)
Translates to: PQSFLPGAEEVKTVSSRGWFQSM*TASLLP
Trigger: GGGAAGAAGCGATGCTGTCCACATACTTTGAAACCA...ACCCCTAGAGGAGACAGTTTTGACCTCTTCAGCACCAGGAAGGAAGCTCTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp CAGAGCTTCCTTCCTGGTGCTGAAGAGGTCAAAACTGTCTCCTCTAGGGGTCAGTGGTTTCAAAGTATGTaGACAGCATCGCTTCTTCCC +
Preference number: 4 (lower is better)
Translates to: QSFLPGAEEVKTVSSRGQWFQSM*TASLLP
Trigger: GGGAAGAAGCGATGCTGTCCACATACTTTGAAACCA...CTGACCCCTAGAGGAGACAGTTTTGACCTCTTCAGCACCAGGAAGGAAGCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp AAGAGAGAGAAGTCCTTAAAGACCCATGCTTCCTCACTGCAACCATCCTCAGAGAGCAGTCAATGCCTTTaGAGTGGTCGTAGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: KREKSLKTHASSLQPSSESSQCL*SGRSSQ
Trigger: CTGGCTGCTACGACCACTCCAAAGGCATTGACTGCT...CTCTGAGGATGGTTGCAGTGAGGAAGCATGGGTCTTTAAGGACTTCTCTCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp ATCCACAGGAGAAACCGTTTGCTTTGGCCTTGCTGGCAAGCTTCATCTGCTAGGTTCTTGCTGGGAAAGTaGATGATGCAGGTGAGCTCT +
Preference number: 4 (lower is better)
Translates to: IHRRNRLLWPCWQASSARFLLGK*MMQVSS
Trigger: AGAGCTCACCTGCATCATCCACTTTCCCAGCAAGAA...CCTAGCAGATGAAGCTTGCCAGCAAGGCCAAAGCAAACGGTTTCTCCTGTGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp AAACTGTCTCCTCTAGGGGTCAGGTCAAAACTGTCCCTCCATAGGTCTCCTCCAATGAGCCACTGTGCCTaGCAAGCAAATCCCATCTTT +
Preference number: 4 (lower is better)
Translates to: KLSPLGVRSKLSLHRSPPMSHCA*QANPIF
Trigger: AAAGATGGGATTTGCTTGCCAGGCACAGTGGCTCAT...TGGAGGAGACCTATGGAGGGACAGTTTTGACCTGACCCCTAGAGGAGACAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313400.9
CDS-3UTR CCA 90 bp AGGAGACTGAGGGCCAGAAAGCGGCAGAGCCCAGGGTTGCACAGTGAGCTTATTAGAAGATTTATGTCCTaGAGGCTCATAAAGGATTCC +
Preference number: 4 (lower is better)
Translates to: RRLRARKRQSPGLHSELIRRFMS*RLIKDS
Trigger: GGAATCCTTTATGAGCCTCCAGGACATAAATCTTCT...AATAAGCTCACTGTGCAACCCTGGGCTCTGCCGCTTTCTGGCCCTCAGTCTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417725.1
CDS-3UTR TCA 90 bp AAAAATGATAAAGGGGATATCACCACCGATCCCACAGAAATACAAACTACCATTGGCCGGCGGCAAAGGTaGCAGGTAGATGGACAGCGC +
Preference number: 4 (lower is better)
Translates to: KNDKGDITTDPTEIQTTIGRRQR*QVDGQR
Trigger: GCGCTGTCCATCTACCTGTCACCTTTGCCGCCGGCC...AATGGTAGTTTGTATTTCTGTGGGATCGGTGGTGATATCCCCTTTATCATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358637.4
CDS-3UTR TCA 90 bp AAGAGAGAGAAGTCCTTAAAGACCCATGCTTCCTCACTGCAACCATCCTCAGAGCTTCCTTCCTGGTGCTaGAGAGGTCAAAACTGTCTC +
Preference number: 4 (lower is better)
Translates to: KREKSLKTHASSLQPSSELPSWC*RGQNCL
Trigger: GAGACAGTTTTGACCTCTTCAGCACCAGGAAGGAAG...CTCTGAGGATGGTTGCAGTGAGGAAGCATGGGTCTTTAAGGACTTCTCTCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR TCA 90 bp CAGAGCTTCCTTCCTGGTGCTGAAGAGGTCAAAACTGTCTCCTCTAGGGGTCAGAAGACAGCAGGTCATTaGTGGTTTCAAAGTATGTGG +
Preference number: 4 (lower is better)
Translates to: QSFLPGAEEVKTVSSRGQKTAGH*WFQSMW
Trigger: CCACATACTTTGAAACCATCAATGACCTGCTGTCTT...CTGACCCCTAGAGGAGACAGTTTTGACCTCTTCAGCACCAGGAAGGAAGCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR TCA 90 bp TGCGCTCAATATGTAGGTTATCAGGAAGGGGATTGTCAATCTCATCAACATTTGGATGCAGGTGAGCTCTaGGCCATAGAGGGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: CAQYVGYQEGDCQSHQHLDAGEL*AIEGLC
Trigger: GCAGAGGCCCTCTATGGCTCAGAGCTCACCTGCATC...CAAATGTTGATGAGATTGACAATCCCCTTCCTGATAACCTACATATTGAGCGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313400.9
CDS-3UTR TCA 90 bp AGAGAAGTCCTTAAAGACCCATGCTTCCTCACTGCAACCATCCTCAGAGCTTCCTCCTCTAGCACAGCTTaGAATGACCAGACTCCTTCT +
Preference number: 4 (lower is better)
Translates to: REVLKDPCFLTATILRASSSSTA*NDQTPS
Trigger: AGAAGGAGTCTGGTCATTTCAAGCTGTGCTAGAGGA...GGAAGCTCTGAGGATGGTTGCAGTGAGGAAGCATGGGTCTTTAAGGACTTCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313400.9
CDS-3UTR TCA 90 bp CACAGGAGAAACCGTTTGCTTTGGCCTTGCTGGCAAGCTTCATCTGCTAGGCCCAAAGTTTTCAGTCCTTaGAAGAGGTGTACTGTCTCT +
Preference number: 4 (lower is better)
Translates to: HRRNRLLWPCWQASSARPKVFSP*KRCTVS
Trigger: AGAGACAGTACACCTCTTTCAAGGACTGAAAACTTT...GGGCCTAGCAGATGAAGCTTGCCAGCAAGGCCAAAGCAAACGGTTTCTCCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313400.9
CDS-3UTR TCA 90 bp GGTCTCCACCTGAAAACTTCTGCCTCGGGATTGACAGCCATCCATAAGAAAAGGTGGCTCTCCCAAAGCTaGTTCCTCCTTTCTTCTCAA +
Preference number: 4 (lower is better)
Translates to: GLHLKTSASGLTAIHKKRWLSQS*FLLSSQ
Trigger: TTGAGAAGAAAGGAGGAATCAGCTTTGGGAGAGCCA...CCTTTTCTTATGGATGGCTGTCAATCCCGAGGCAGAAGTTTTCAGGTGGAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361209.6
CDS-3UTR GCA 90 bp ATGGAAACAAAACAGAGCCTTTGCAGCAGACTAGAAATAGAAGATACCTTCTTCGCTGCAGAAGGGGGCTaGAGTTGGGGAGCCCATTGG +
Preference number: 4 (lower is better)
Translates to: METKQSLCSRLEIEDTFFAAEGG*SWGAHW
Trigger: CCAATGGGCTCCCCAACTGCAGCCCCCTTCTGCAGC...GAAGAAGGTATCTTCTATTTCTAGTCTGCTGCAAAGGCTCTGTTTTGTTTCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000358637.4
CDS-3UTR GCA 90 bp AGAAGAGCAAAGGCCGCTTGGTCTCCACCTGAAAACTTCTGCCTCGGGATTGACGTCAGCTATTTCTTCTaGCTTGTTGTCATCTACCAG +
Preference number: 4 (lower is better)
Translates to: RRAKAAWSPPENFCLGIDVSYFF*LVVIYQ
Trigger: CTGGTAGATGACAACAAGGCAGAAGAAATAGCTGAC...GTCAATCCCGAGGCAGAAGTTTTCAGGTGGAGACCAAGCGGCCTTTGCTCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp GGTCTCCACCTGAAAACTTCTGCCTCGGGATTGACAGCCATCCATAAGAAAAGGGTCCTTAAAGACCCATaGTTCCTCACTGCAACCATC +
Preference number: 4 (lower is better)
Translates to: GLHLKTSASGLTAIHKKRVLKDP*FLTATI
Trigger: GATGGTTGCAGTGAGGAAGCATGGGTCTTTAAGGAC...CCTTTTCTTATGGATGGCTGTCAATCCCGAGGCAGAAGTTTTCAGGTGGAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp AAACTGTCTCCTCTAGGGGTCAGGTCAAAACTGTCCCTCCATAGGTCTCCTCCAGAAATGTGGAGGATGTaGATCTGCTCCTCAACAATC +
Preference number: 4 (lower is better)
Translates to: KLSPLGVRSKLSLHRSPPEMWRM*ICSSTI
Trigger: GATTGTTGAGGAGCAGATGCACATCCTCCACATTTC...TGGAGGAGACCTATGGAGGGACAGTTTTGACCTGACCCCTAGAGGAGACAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313400.9
ENST00000361209.6
CDS-3UTR GCA 90 bp GGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCCCACAAACTCAATAATGTCCATAAATAGTCATGGATaGTTCAAGGCAGCATCAAGC +
Preference number: 4 (lower is better)
Translates to: GRPTGSRKRQGPTNSIMSINSHG*FKAASS
Trigger: GCTTGATGCTGCCTTGAAGCATCCATGACTATTTAT...GGACATTATTGAGTTTGTGGGACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313400.9
CDS-3UTR GCA 90 bp TGTCACCTAGGCTGGAGTCCAGTGGCTCCATGTCAGTTCACTGCAAACTCTGCCATTTTCCTGGATGTCTaGCCAAGACTCACAGTATTA +
Preference number: 4 (lower is better)
Translates to: CHLGWSPVAPCQFTANSAIFLDV*PRLTVL
Trigger: TAATACTGTGAGTCTTGGGCAGACATCCAGGAAAAT...GGCAGAGTTTGCAGTGAACTGACATGGAGCCACTGGACTCCAGCCTAGGTGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313400.9
CDS-3UTR CCA 90 bp ACATACCAGAATCTCTGGGACACATTTAAAGCAGTGTGTAGAGGGAGATTTATACAGCTGCTCCTTGCCTaGCCGGCGGCAAAGGTGACA +
Preference number: 4 (lower is better)
Translates to: TYQNLWDTFKAVCRGRFIQLLLA*PAAKVT
Trigger: TGTCACCTTTGCCGCCGGCCAGGCAAGGAGCAGCTG...TATAAATCTCCCTCTACACACTGCTTTAAATGTGTCCCAGAGATTCTGGTATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358637.4
CDS-3UTR CCA 90 bp AGAAAATTCAACATCTGTTTCCAATGGAAACAAAACAGAGCCTTTGCAGCAGACCCAGCAGCACTGGTGTaGGGCTCAGCTGCTCCTTGC +
Preference number: 4 (lower is better)
Translates to: RKFNICFQWKQNRAFAADPAALV*GSAAPC
Trigger: GCAAGGAGCAGCTGAGCCCCACACCAGTGCTGCTGG...GTCTGCTGCAAAGGCTCTGTTTTGTTTCCATTGGAAACAGATGTTGAATTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358637.4
CDS-3UTR CCA 90 bp GGTCTCCACCTGAAAACTTCTGCCTCGGGATTGACAGCCATCCATAAGAAAAGGGGAATTTTTAATGCATaGACAGGCCTGCAGGGACTC +
Preference number: 4 (lower is better)
Translates to: GLHLKTSASGLTAIHKKRGIFNA*TGLQGL
Trigger: GAGTCCCTGCAGGCCTGTCCATGCATTAAAAATTCC...CCTTTTCTTATGGATGGCTGTCAATCCCGAGGCAGAAGTTTTCAGGTGGAGACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp AAGAGAGAGAAGTCCTTAAAGACCCATGCTTCCTCACTGCAACCATCCTCAGAGGTCATCTGGAAGACTTaGCCTTGGTTCACATGCTGG +
Preference number: 4 (lower is better)
Translates to: KREKSLKTHASSLQPSSEVIWKT*PWFTCW
Trigger: CCAGCATGTGAACCAAGGCCAAGTCTTCCAGATGAC...CTCTGAGGATGGTTGCAGTGAGGAAGCATGGGTCTTTAAGGACTTCTCTCTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp TGCGCTCAATATGTAGGTTATCAGGAAGGGGATTGTCAATCTCATCAACATTTGGAGCAGTTGGAGGTCTaGAAGGGGCTCGGAGAGGAC +
Preference number: 4 (lower is better)
Translates to: CAQYVGYQEGDCQSHQHLEQLEV*KGLGED
Trigger: GTCCTCTCCGAGCCCCTTCCAGACCTCCAACTGCTC...CAAATGTTGATGAGATTGACAATCCCCTTCCTGATAACCTACATATTGAGCGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313400.9
CDS-3UTR CCA 90 bp CAATGGCACCCCTCTCTTTGGGGCCTTCTCCAATCCATCCTTCACCCTGTAGTGACTGTCTCTTGTCTCTaGGCTTTTGTTCATATCTCT +
Preference number: 4 (lower is better)
Translates to: QWHPSLWGLLQSILHPVVTVSCL*AFVHIS
Trigger: AGAGATATGAACAAAAGCCCAGAGACAAGAGACAGT...CACTACAGGGTGAAGGATGGATTGGAGAAGGCCCCAAAGAGAGGGGTGCCATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000313400.9
CDS-3UTR CCA 90 bp ATCCACAGGAGAAACCGTTTGCTTTGGCCTTGCTGGCAAGCTTCATCTGCTAGGTCATCACCTCCTTCATaGAAAATGACAATGGCACCC +
Preference number: 4 (lower is better)
Translates to: IHRRNRLLWPCWQASSARSSPPS*KMTMAP
Trigger: GGGTGCCATTGTCATTTTCCATGAAGGAGGTGATGA...CCTAGCAGATGAAGCTTGCCAGCAAGGCCAAAGCAAACGGTTTCTCCTGTGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313400.9
CDS-3UTR CCA 90 bp AGAAAGCGGCAGAGCCCAGGGTTGCACAGTGAGCTTATTAGCAGCACCAGGATAATCAGTGTGGGATGTTaGAGCAATCTCAGATATCCT +
Preference number: 4 (lower is better)
Translates to: RKRQSPGLHSELISSTRIISVGC*SNLRYP
Trigger: AGGATATCTGAGATTGCTCCAACATCCCACACTGAT...TATCCTGGTGCTGCTAATAAGCTCACTGTGCAACCCTGGGCTCTGCCGCTTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417725.1
CDS-3UTR TCA 90 bp AAGAGAGAGAAGTCCTTAAAGACCCATGCTTCCTCACTGCAACCATCCTCAGAGTGCCATTGTCTTGGATaGGGGTATAAAGTGGCACCA +
Preference number: 4 (lower is better)
Translates to: KREKSLKTHASSLQPSSECHCLG*GYKVAP
Trigger: TGGTGCCACTTTATACCCTCATCCAAGACAATGGCA...CTCTGAGGATGGTTGCAGTGAGGAAGCATGGGTCTTTAAGGACTTCTCTCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR TCA 90 bp TGCGCTCAATATGTAGGTTATCAGGAAGGGGATTGTCAATCTCATCAACATTTGCAGACATCTCCAGGGTaGAGAAGGGCAGCTCGGTGT +
Preference number: 4 (lower is better)
Translates to: CAQYVGYQEGDCQSHQHLQTSPG*RRAARC
Trigger: ACACCGAGCTGCCCTTCTTCACCCTGGAGATGTCTG...CAAATGTTGATGAGATTGACAATCCCCTTCCTGATAACCTACATATTGAGCGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313400.9
CDS-3UTR TCA 90 bp AAACTGTCTCCTCTAGGGGTCAGGTCAAAACTGTCCCTCCATAGGTCTCCTCCAAAGACAGCAGGTCATTaGTGGTTTCAAAGTATGTGG +
Preference number: 4 (lower is better)
Translates to: KLSPLGVRSKLSLHRSPPKTAGH*WFQSMW
Trigger: CCACATACTTTGAAACCATCAATGACCTGCTGTCTT...TGGAGGAGACCTATGGAGGGACAGTTTTGACCTGACCCCTAGAGGAGACAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp TGCGCTCAATATGTAGGTTATCAGGAAGGGGATTGTCAATCTCATCAACATTTGCACTGCTGTCTCCAGTaGACCAGCGAGATGTCCGCT +
Preference number: 4 (lower is better)
Translates to: CAQYVGYQEGDCQSHQHLHCCLQ*TSEMSA
Trigger: AGCGGACATCTCGCTGGTGCACTGGAGACAGCAGTG...CAAATGTTGATGAGATTGACAATCCCCTTCCTGATAACCTACATATTGAGCGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313400.9
CDS-3UTR CCA 90 bp AGGAGAAACCGTTTGCTTTGGCCTTGCTGGCAAGCTTCATCTGCTAGGCCCATCTCGACTTCCCCAGAATaGAAGTTTGATTTTTCCGTT +
Preference number: 4 (lower is better)
Translates to: RRNRLLWPCWQASSARPISTSPE*KFDFSV
Trigger: AACGGAAAAATCAAACTTCCATTCTGGGGAAGTCGA...GATGGGCCTAGCAGATGAAGCTTGCCAGCAAGGCCAAAGCAAACGGTTTCTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000288520.9
CDS-3UTR TCA 90 bp TCCCAACCAGATTTTCCTGGATGTCTGCCCAAGACTCACAGTATTATGCATATTGAACAGCATCGAGGCTaGGACCTCCATCAGTGTGTT +
Preference number: 4 (lower is better)
Translates to: SQPDFPGCLPKTHSIMHIEQHRG*DLHQCV
Trigger: AACACACTGATGGAGGTCTCAGCCTCGATGCTGTTC...AATATGCATAATACTGTGAGTCTTGGGCAGACATCCAGGAAAATCTGGTTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313400.9
CDS-3UTR TCA 90 bp AGAGAAGTCCTTAAAGACCCATGCTTCCTCACTGCAACCATCCTCAGAGCTTCCATTTTCTGCAACTGTTaGGCTAAATTGTTCCTCGGG +
Preference number: 4 (lower is better)
Translates to: REVLKDPCFLTATILRASIFCNC*AKLFLG
Trigger: CCCGAGGAACAATTTAGCTCAACAGTTGCAGAAAAT...GGAAGCTCTGAGGATGGTTGCAGTGAGGAAGCATGGGTCTTTAAGGACTTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313400.9
CDS-3UTR GCA 90 bp GGTCTCCACCTGAAAACTTCTGCCTCGGGATTGACAGCCATCCATAAGAAAAGGGTCAGCTATTTCTTCTaGCTTGTTGTCATCTACCAG +
Preference number: 4 (lower is better)
Translates to: GLHLKTSASGLTAIHKKRVSYFF*LVVIYQ
Trigger: CTGGTAGATGACAACAAGGCAGAAGAAATAGCTGAC...CCTTTTCTTATGGATGGCTGTCAATCCCGAGGCAGAAGTTTTCAGGTGGAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR GCA 90 bp TCCCAACCAGATTTTCCTGGATGTCTGCCCAAGACTCACAGTATTATGCATATTAAGTGCTCGGGCACATaGAGAGTCACCTTCACAGTG +
Preference number: 4 (lower is better)
Translates to: SQPDFPGCLPKTHSIMHIKCSGT*RVTFTV
Trigger: CACTGTGAAGGTGACTCTGCATGTGCCCGAGCACTT...AATATGCATAATACTGTGAGTCTTGGGCAGACATCCAGGAAAATCTGGTTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313400.9
CDS-3UTR GCA 90 bp AGAAGAGCAAAGGCCGCTTGGTCTCCACCTGAAAACTTCTGCCTCGGGATTGACAACAGGTGTCATCTTTaGATTATGATATACCTGACC +
Preference number: 4 (lower is better)
Translates to: RRAKAAWSPPENFCLGIDNRCHL*IMIYLT
Trigger: GGTCAGGTATATCATAATGCAAAGATGACACCTGTT...GTCAATCCCGAGGCAGAAGTTTTCAGGTGGAGACCAAGCGGCCTTTGCTCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313400.9
CDS-3UTR CCA 90 bp ATGGAAACAAAACAGAGCCTTTGCAGCAGACTAGAAATAGAAGATACCTTCTTCGATTTCCAGCAGCACTaGTGTGGGGCTCAGCTGCTC +
Preference number: 4 (lower is better)
Translates to: METKQSLCSRLEIEDTFFDFQQH*CGAQLL
Trigger: GAGCAGCTGAGCCCCACACCAGTGCTGCTGGAAATC...GAAGAAGGTATCTTCTATTTCTAGTCTGCTGCAAAGGCTCTGTTTTGTTTCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358637.4
CDS-3UTR CCA 90 bp AGAAAATTCAACATCTGTTTCCAATGGAAACAAAACAGAGCCTTTGCAGCAGACGAAGGGGGCTGCAGTTaGGGAGCCCATTGGCATCAA +
Preference number: 4 (lower is better)
Translates to: RKFNICFQWKQNRAFAADEGGCS*GAHWHQ
Trigger: TTGATGCCAATGGGCTCCCCAACTGCAGCCCCCTTC...GTCTGCTGCAAAGGCTCTGTTTTGTTTCCATTGGAAACAGATGTTGAATTTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000358637.4
CDS-3UTR CCA 90 bp AGAAAATTCAACATCTGTTTCCAATGGAAACAAAACAGAGCCTTTGCAGCAGACAGGAGACCACAGTACTaGAGGGCTCCACTGTTGGGG +
Preference number: 4 (lower is better)
Translates to: RKFNICFQWKQNRAFAADRRPQY*RAPLLG
Trigger: CCCCAACAGTGGAGCCCTCCAGTACTGTGGTCTCCT...GTCTGCTGCAAAGGCTCTGTTTTGTTTCCATTGGAAACAGATGTTGAATTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358637.4
CDS-3UTR CCA 90 bp AAGAGAGAGAAGTCCTTAAAGACCCATGCTTCCTCACTGCAACCATCCTCAGAGGGCTGTCTTGTTCACTaGGCTTTTCAGCAAACCTTT +
Preference number: 4 (lower is better)
Translates to: KREKSLKTHASSLQPSSEGCLVH*AFQQTF
Trigger: AAAGGTTTGCTGAAAAGCCCAGTGAACAAGACAGCC...CTCTGAGGATGGTTGCAGTGAGGAAGCATGGGTCTTTAAGGACTTCTCTCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp ATCCACAGGAGAAACCGTTTGCTTTGGCCTTGCTGGCAAGCTTCATCTGCTAGGTTTCACCTCTCTGTCTaGCTTATTTCTACTCATCCT +
Preference number: 4 (lower is better)
Translates to: IHRRNRLLWPCWQASSARFHLSV*LISTHP
Trigger: AGGATGAGTAGAAATAAGCCAGACAGAGAGGTGAAA...CCTAGCAGATGAAGCTTGCCAGCAAGGCCAAAGCAAACGGTTTCTCCTGTGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313400.9
CDS-3UTR TCA 90 bp TCCCAACCAGATTTTCCTGGATGTCTGCCCAAGACTCACAGTATTATGCATATTTCTCCACACCTGAAATaGGCTGGTCATCTGACAGCA +
Preference number: 4 (lower is better)
Translates to: SQPDFPGCLPKTHSIMHISPHLK*AGHLTA
Trigger: TGCTGTCAGATGACCAGCTCATTTCAGGTGTGGAGA...AATATGCATAATACTGTGAGTCTTGGGCAGACATCCAGGAAAATCTGGTTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313400.9
CDS-3UTR TCA 90 bp AAAAATGATAAAGGGGATATCACCACCGATCCCACAGAAATACAAACTACCATTGTGGCACCACACGGTTaGTTTCCAGCAGCACTGGTG +
Preference number: 4 (lower is better)
Translates to: KNDKGDITTDPTEIQTTIVAPHG*FPAALV
Trigger: CACCAGTGCTGCTGGAAATCAACCGTGTGGTGCCAC...AATGGTAGTTTGTATTTCTGTGGGATCGGTGGTGATATCCCCTTTATCATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358637.4
CDS-3UTR TCA 90 bp AAAAATGATAAAGGGGATATCACCACCGATCCCACAGAAATACAAACTACCATTTGGCATCAAAGGCGCTaGGGTCACACCTGCACCAGT +
Preference number: 4 (lower is better)
Translates to: KNDKGDITTDPTEIQTTIWHQRR*GHTCTS
Trigger: ACTGGTGCAGGTGTGACCTCAGCGCCTTTGATGCCA...AATGGTAGTTTGTATTTCTGTGGGATCGGTGGTGATATCCCCTTTATCATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358637.4
CDS-3UTR TCA 90 bp ATGGAAACAAAACAGAGCCTTTGCAGCAGACTAGAAATAGAAGATACCTTCTTCGTCCCAATAGCTGGCTaGACATCCACCCACTCCAAG +
Preference number: 4 (lower is better)
Translates to: METKQSLCSRLEIEDTFFVPIAG*TSTHSK
Trigger: CTTGGAGTGGGTGGATGTTCAGCCAGCTATTGGGAC...GAAGAAGGTATCTTCTATTTCTAGTCTGCTGCAAAGGCTCTGTTTTGTTTCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358637.4
CDS-3UTR TCA 90 bp AAGAGAGAGAAGTCCTTAAAGACCCATGCTTCCTCACTGCAACCATCCTCAGAGACACTTGAAGATGACTaGGTAGATACTGACTTCAGG +
Preference number: 4 (lower is better)
Translates to: KREKSLKTHASSLQPSSETLEDD*VDTDFR
Trigger: CCTGAAGTCAGTATCTACTCAGTCATCTTCAAGTGT...CTCTGAGGATGGTTGCAGTGAGGAAGCATGGGTCTTTAAGGACTTCTCTCTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR TCA 90 bp AGAAAATTCAACATCTGTTTCCAATGGAAACAAAACAGAGCCTTTGCAGCAGACCCAGCTCTGTGGTCTTaGGTGAACTTGAGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: RKFNICFQWKQNRAFAADPALWS*VNLSRS
Trigger: GGACCTGCTCAAGTTCACTCAAGACCACAGAGCTGG...GTCTGCTGCAAAGGCTCTGTTTTGTTTCCATTGGAAACAGATGTTGAATTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358637.4
CDS-3UTR GCA 90 bp AAGAGAGAGAAGTCCTTAAAGACCCATGCTTCCTCACTGCAACCATCCTCAGAGGTCAGCTATTTCTTCTaGCTTGTTGTCATCTACCAG +
Preference number: 4 (lower is better)
Translates to: KREKSLKTHASSLQPSSEVSYFF*LVVIYQ
Trigger: CTGGTAGATGACAACAAGGCAGAAGAAATAGCTGAC...CTCTGAGGATGGTTGCAGTGAGGAAGCATGGGTCTTTAAGGACTTCTCTCTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CCA 90 bp TCCCAACCAGATTTTCCTGGATGTCTGCCCAAGACTCACAGTATTATGCATATTGTCATCTGGAAGACTTaGCCTTGGTTCACATGCTGG +
Preference number: 4 (lower is better)
Translates to: SQPDFPGCLPKTHSIMHIVIWKT*PWFTCW
Trigger: CCAGCATGTGAACCAAGGCCAAGTCTTCCAGATGAC...AATATGCATAATACTGTGAGTCTTGGGCAGACATCCAGGAAAATCTGGTTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313400.9
CDS-3UTR CCA 90 bp AGGAGAAACCGTTTGCTTTGGCCTTGCTGGCAAGCTTCATCTGCTAGGCCCATCCATATCTCTTCTTCCTaGAGCAAATTCCATCTTTTT +
Preference number: 4 (lower is better)
Translates to: RRNRLLWPCWQASSARPIHISSS*SKFHLF
Trigger: AAAAAGATGGAATTTGCTCCAGGAAGAAGAGATATG...GATGGGCCTAGCAGATGAAGCTTGCCAGCAAGGCCAAAGCAAACGGTTTCTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313400.9
CDS-3UTR TCA 90 bp ATGGAAACAAAACAGAGCCTTTGCAGCAGACTAGAAATAGAAGATACCTTCTTCAATGAGCTGGTCATCTaGCAGCATCTGGGCTGTCAG +
Preference number: 4 (lower is better)
Translates to: METKQSLCSRLEIEDTFFNELVI*QHLGCQ
Trigger: CTGACAGCCCAGATGCTGTCAGATGACCAGCTCATT...GAAGAAGGTATCTTCTATTTCTAGTCTGCTGCAAAGGCTCTGTTTTGTTTCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358637.4
CDS-3UTR TCA 90 bp GGTCTCCACCTGAAAACTTCTGCCTCGGGATTGACAGCCATCCATAAGAAAAGGCAACATTTGCCAAATTaGGAAGTAGGCATGGTTTTT +
Preference number: 4 (lower is better)
Translates to: GLHLKTSASGLTAIHKKRQHLPN*EVGMVF
Trigger: AAAAACCATGCCTACTTCTCAATTTGGCAAATGTTG...CCTTTTCTTATGGATGGCTGTCAATCCCGAGGCAGAAGTTTTCAGGTGGAGACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313400.9
CDS-3UTR GCA 90 bp TCCCAACCAGATTTTCCTGGATGTCTGCCCAAGACTCACAGTATTATGCATATTGTAGGAACTCATCAGTaGACTCTTGAAGGCCTCCTT +
Preference number: 4 (lower is better)
Translates to: SQPDFPGCLPKTHSIMHIVGTHQ*TLEGLL
Trigger: AAGGAGGCCTTCAAGAGTGCACTGATGAGTTCCTAC...AATATGCATAATACTGTGAGTCTTGGGCAGACATCCAGGAAAATCTGGTTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313400.9
CDS-3UTR CCA 90 bp AAAAATGATAAAGGGGATATCACCACCGATCCCACAGAAATACAAACTACCATTAAGGTGACAGGTAGATaGACAGCGCCCCTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: KNDKGDITTDPTEIQTTIKVTGR*TAPLLL
Trigger: GAGGAGAAGGGGCGCTGTCCATCTACCTGTCACCTT...AATGGTAGTTTGTATTTCTGTGGGATCGGTGGTGATATCCCCTTTATCATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000358637.4
CDS-3UTR CCA 90 bp ATGGAAACAAAACAGAGCCTTTGCAGCAGACTAGAAATAGAAGATACCTTCTTCCTTGGTCCCAATAGCTaGCTGAACATCCACCCACTC +
Preference number: 4 (lower is better)
Translates to: METKQSLCSRLEIEDTFFLGPNS*LNIHPL
Trigger: GAGTGGGTGGATGTTCAGCCAGCTATTGGGACCAAG...GAAGAAGGTATCTTCTATTTCTAGTCTGCTGCAAAGGCTCTGTTTTGTTTCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358637.4
3UTR CAA 72 bp CATTCTTCTCAGCACCACATCGCAGTTATTCCAAAATaGATCACACAGTGGGAAGTAAAGCACTCCTCAGCA +
Preference number: 4 (lower is better)
Translates to: HSSQHHIAVIPK*ITQWEVKHSSA
Trigger: TGCTGAGGAGTGCTTTACTTCCCACTGTGTGATCAATTTTGGAATAACTGCGATGTGGTGCTGAGAAGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358637.4
CDS-3UTR TCA 90 bp AGAAAATTCAACATCTGTTTCCAATGGAAACAAAACAGAGCCTTTGCAGCAGACTCTCCACACCTGAAATaGGCTGGTCATCTGACAGCA +
Preference number: 4 (lower is better)
Translates to: RKFNICFQWKQNRAFAADSPHLK*AGHLTA
Trigger: TGCTGTCAGATGACCAGCTCATTTCAGGTGTGGAGA...GTCTGCTGCAAAGGCTCTGTTTTGTTTCCATTGGAAACAGATGTTGAATTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358637.4
CDS-3UTR TCA 90 bp AGAAAATTCAACATCTGTTTCCAATGGAAACAAAACAGAGCCTTTGCAGCAGACTCATCAGTGCACTCTTaGAGGCCTCCTTTGTGCCAT +
Preference number: 4 (lower is better)
Translates to: RKFNICFQWKQNRAFAADSSVHS*RPPLCH
Trigger: ATGGCACAAAGGAGGCCTTCAAGAGTGCACTGATGA...GTCTGCTGCAAAGGCTCTGTTTTGTTTCCATTGGAAACAGATGTTGAATTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358637.4
CDS-3UTR TCA 90 bp AAAAATGATAAAGGGGATATCACCACCGATCCCACAGAAATACAAACTACCATTCACATCCCCTTTCCCTaGGCACCAGTAGGAACTCAT +
Preference number: 4 (lower is better)
Translates to: KNDKGDITTDPTEIQTTIHIPFP*APVGTH
Trigger: ATGAGTTCCTACTGGTGCTCAGGGAAAGGGGATGTG...AATGGTAGTTTGTATTTCTGTGGGATCGGTGGTGATATCCCCTTTATCATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000358637.4
CDS-3UTR GCA 90 bp ATGGAAACAAAACAGAGCCTTTGCAGCAGACTAGAAATAGAAGATACCTTCTTCGCTTCATCCCTGGGATaGAAGGCTGGTTCAATATCC +
Preference number: 4 (lower is better)
Translates to: METKQSLCSRLEIEDTFFASSLG*KAGSIS
Trigger: GGATATTGAACCAGCCTTGCATCCCAGGGATGAAGC...GAAGAAGGTATCTTCTATTTCTAGTCTGCTGCAAAGGCTCTGTTTTGTTTCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358637.4
CDS-3UTR CCA 90 bp ACATACCAGAATCTCTGGGACACATTTAAAGCAGTGTGTAGAGGGAGATTTATACCACCACAATCAAGTTaGCTTCATCCCTGGGATGCA +
Preference number: 4 (lower is better)
Translates to: TYQNLWDTFKAVCRGRFIPPQSS*LHPWDA
Trigger: TGCATCCCAGGGATGAAGCCAACTTGATTGTGGTGG...TATAAATCTCCCTCTACACACTGCTTTAAATGTGTCCCAGAGATTCTGGTATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358637.4
3UTR CAA 72 bp CTTGAAAGAGGTGTACTGTCTCTTGTCTCTGGGCTTTaGTTCATATCTCTTCTTCCTGGAGCAAATTCCATC +
Preference number: 4 (lower is better)
Translates to: LERGVLSLVSGL*FISLLPGANSI
Trigger: GATGGAATTTGCTCCAGGAAGAAGAGATATGAACAAAAGCCCAGAGACAAGAGACAGTACACCTCTTTCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313400.9
3UTR CAA 72 bp CCAAGCTCCCAGCCTCACCTTTTAACACTTCCTATTTaGATCCCTACTCTTAAGGAAAGTTTTCAGTCCTTG +
Preference number: 4 (lower is better)
Translates to: PSSQPHLLTLPI*IPTLKESFQSL
Trigger: CAAGGACTGAAAACTTTCCTTAAGAGTAGGGATCAAAATAGGAAGTGTTAAAAGGTGAGGCTGGGAGCTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313400.9
CDS-3UTR TCA 90 bp AGAAAATTCAACATCTGTTTCCAATGGAAACAAAACAGAGCCTTTGCAGCAGACTGCCATTGTCTTGGATaGGGGTATAAAGTGGCACCA +
Preference number: 4 (lower is better)
Translates to: RKFNICFQWKQNRAFAADCHCLG*GYKVAP
Trigger: TGGTGCCACTTTATACCCTCATCCAAGACAATGGCA...GTCTGCTGCAAAGGCTCTGTTTTGTTTCCATTGGAAACAGATGTTGAATTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000358637.4
CDS-3UTR GCA 90 bp AGAAAATTCAACATCTGTTTCCAATGGAAACAAAACAGAGCCTTTGCAGCAGACGTAGGAACTCATCAGTaGACTCTTGAAGGCCTCCTT +
Preference number: 4 (lower is better)
Translates to: RKFNICFQWKQNRAFAADVGTHQ*TLEGLL
Trigger: AAGGAGGCCTTCAAGAGTGCACTGATGAGTTCCTAC...GTCTGCTGCAAAGGCTCTGTTTTGTTTCCATTGGAAACAGATGTTGAATTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358637.4
CDS-3UTR GCA 90 bp AAGAGAGAGAAGTCCTTAAAGACCCATGCTTCCTCACTGCAACCATCCTCAGAGATACATTGCATTGGATaGATGTTAACTCCCTTATCA +
Preference number: 4 (lower is better)
Translates to: KREKSLKTHASSLQPSSEIHCIG*MLTPLS
Trigger: TGATAAGGGAGTTAACATGCATCCAATGCAATGTAT...CTCTGAGGATGGTTGCAGTGAGGAAGCATGGGTCTTTAAGGACTTCTCTCTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313400.9
CDS-3UTR CCA 90 bp ACATACCAGAATCTCTGGGACACATTTAAAGCAGTGTGTAGAGGGAGATTTATAGATGAGGGTATAAAGTaGCACCACACGGTTGATTTC +
Preference number: 4 (lower is better)
Translates to: TYQNLWDTFKAVCRGRFIDEGIK*HHTVDF
Trigger: GAAATCAACCGTGTGGTGCCACTTTATACCCTCATC...TATAAATCTCCCTCTACACACTGCTTTAAATGTGTCCCAGAGATTCTGGTATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358637.4
CDS-3UTR TCA 90 bp ATGGAAACAAAACAGAGCCTTTGCAGCAGACTAGAAATAGAAGATACCTTCTTCACCACAGTGATTCTCTaGGAAGACAGATACACTTCA +
Preference number: 4 (lower is better)
Translates to: METKQSLCSRLEIEDTFFTTVIL*EDRYTS
Trigger: TGAAGTGTATCTGTCTTCTCAGAGAATCACTGTGGT...GAAGAAGGTATCTTCTATTTCTAGTCTGCTGCAAAGGCTCTGTTTTGTTTCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358637.4
CDS-3UTR CCA 90 bp ACATACCAGAATCTCTGGGACACATTTAAAGCAGTGTGTAGAGGGAGATTTATAAAATGGATAAATTCCTaGACACATACAGCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: TYQNLWDTFKAVCRGRFIKWINS*THTASS
Trigger: GGAGGAGGCTGTATGTGTCCAGGAATTTATCCATTT...TATAAATCTCCCTCTACACACTGCTTTAAATGTGTCCCAGAGATTCTGGTATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358637.4
CDS-3UTR TCA 90 bp ACATACCAGAATCTCTGGGACACATTTAAAGCAGTGTGTAGAGGGAGATTTATAAAACTCCCAAATATTTaGAAACGAAGTGGCATGCCT +
Preference number: 4 (lower is better)
Translates to: TYQNLWDTFKAVCRGRFIKLPNI*KRSGMP
Trigger: AGGCATGCCACTTCGTTTTCAAATATTTGGGAGTTT...TATAAATCTCCCTCTACACACTGCTTTAAATGTGTCCCAGAGATTCTGGTATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358637.4
CDS-3UTR GCA 90 bp AGAAAATTCAACATCTGTTTCCAATGGAAACAAAACAGAGCCTTTGCAGCAGACTCTCTCAGAACACAGTaGAATCAAACTAGAACTCAG +
Preference number: 4 (lower is better)
Translates to: RKFNICFQWKQNRAFAADSLRTQ*NQTRTQ
Trigger: CTGAGTTCTAGTTTGATTGCACTGTGTTCTGAGAGA...GTCTGCTGCAAAGGCTCTGTTTTGTTTCCATTGGAAACAGATGTTGAATTTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358637.4
CDS-3UTR CCA 90 bp ATGGAAACAAAACAGAGCCTTTGCAGCAGACTAGAAATAGAAGATACCTTCTTCACATACCAGAATCTCTaGGACACATTTAAAGCAGTG +
Preference number: 4 (lower is better)
Translates to: METKQSLCSRLEIEDTFFTYQNL*DTFKAV
Trigger: CACTGCTTTAAATGTGTCCCAGAGATTCTGGTATGT...GAAGAAGGTATCTTCTATTTCTAGTCTGCTGCAAAGGCTCTGTTTTGTTTCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358637.4
CDS-3UTR CCA 90 bp ACATACCAGAATCTCTGGGACACATTTAAAGCAGTGTGTAGAGGGAGATTTATACAACCTACACATTCCTaGGATAAATCTCACATAGTA +
Preference number: 4 (lower is better)
Translates to: TYQNLWDTFKAVCRGRFIQPTHS*DKSHIV
Trigger: TACTATGTGAGATTTATCCCAGGAATGTGTAGGTTG...TATAAATCTCCCTCTACACACTGCTTTAAATGTGTCCCAGAGATTCTGGTATGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358637.4
CDS-3UTR TCA 90 bp AAAAATGATAAAGGGGATATCACCACCGATCCCACAGAAATACAAACTACCATTGTAGTTAAGAGGGAATaGCTACATTACAAGAAAGGT +
Preference number: 4 (lower is better)
Translates to: KNDKGDITTDPTEIQTTIVVKRE*LHYKKG
Trigger: ACCTTTCTTGTAATGTAGTCATTCCCTCTTAACTAC...AATGGTAGTTTGTATTTCTGTGGGATCGGTGGTGATATCCCCTTTATCATTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358637.4
CDS-3UTR CCA 90 bp ACATACCAGAATCTCTGGGACACATTTAAAGCAGTGTGTAGAGGGAGATTTATAAACATCTGTTTCCAATaGAAACAAAACAGAGCCTTT +
Preference number: 4 (lower is better)
Translates to: TYQNLWDTFKAVCRGRFINICFQ*KQNRAF
Trigger: AAAGGCTCTGTTTTGTTTCCATTGGAAACAGATGTT...TATAAATCTCCCTCTACACACTGCTTTAAATGTGTCCCAGAGATTCTGGTATGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358637.4
CDS-3UTR GCA 90 bp AAAAATGATAAAGGGGATATCACCACCGATCCCACAGAAATACAAACTACCATTTATCCTAAATATATATaGACCCAATATAGGAGCACC +
Preference number: 4 (lower is better)
Translates to: KNDKGDITTDPTEIQTTIYPKYI*TQYRST
Trigger: GGTGCTCCTATATTGGGTGCATATATATTTAGGATA...AATGGTAGTTTGTATTTCTGTGGGATCGGTGGTGATATCCCCTTTATCATTTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358637.4
CDS CCA 90 bp TCTTCAGCCGGCACGGGCTGTCGGGCTCCCGCGAGGCAGCGGCGGTaGCGCCGGCCAGCAGCGGCGGCGGCGGCAGCAGGAGCAGGAACA +
Preference number: 5 (lower is better)
Translates to: SSAGTGCRAPARQRR*RRPAAAAAAAGAGT
Trigger: TGTTCCTGCTCCTGCTGCCGCCGCCGCCGCTGCTGGCCGGCGCCACCGCCGCTGCCTCGCGGGAGCCCGACAGCCCGTGCCGGCTGAAGA
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000361477.8
CDS GCA 90 bp GCAGCTCGTTACGCACAAAGAGCAGGAGGCGCGACTCGGCGGCGGTaGCGGCAGAGCCAGGAGAGCCCGGGGACGCGGCGGCGGCGGCGG +
Preference number: 5 (lower is better)
Translates to: AARYAQRAGGATRRR*RQSQESPGTRRRRR
Trigger: CCGCCGCCGCCGCCGCGTCCCCGGGCTCTCCTGGCTCTGCCGGCACCGCCGCCGAGTCGCGCCTCCTGCTCTTTGTGCGTAACGAGCTGC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000361477.8
CDS TCA 90 bp TCCAGCCGATGTCGCTCTCCCGCAGGGCGGGCAGTGTGGACACCGTaGCGGTCTTCAGCCGGCACGGGCTGTCGGGCTCCCGCGAGGCAG +
Preference number: 5 (lower is better)
Translates to: SSRCRSPAGRAVWTP*RSSAGTGCRAPARQ
Trigger: CTGCCTCGCGGGAGCCCGACAGCCCGTGCCGGCTGAAGACCGTCACGGTGTCCACACTGCCCGCCCTGCGGGAGAGCGACATCGGCTGGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000361477.8
CDS-3UTR CAA 90 bp ACAGGCCTGCAGGGACTCTGGGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCGGGCTCAGCTGCTCCTaGCCTGGCCGGCGGCAAAGG +
Preference number: 5 (lower is better)
Translates to: TGLQGLWADPQVAGRGRVGLSCS*PGRRQR
Trigger: CCTTTGCCGCCGGCCAGGCAAGGAGCAGCTGAGCCC...GACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCCCAGAGTCCCTGCAGGCCTGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS CCA 90 bp CTTGCGCTCTTCTGGGGGATGCGGCGACGCTTCTGCCAACGTCGCTaGGCGTACAGCGCCACGGTGAACACCAGCAGCAGCAGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: LALFWGMRRRFCQRR*AYSATVNTSSSSSS
Trigger: GCTGCTGCTGCTGCTGCTGGTGTTCACCGTGGCGCTGTACGCCCAGCGACGTTGGCAGAAGCGTCGCCGCATCCCCCAGAAGAGCGCAAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000361477.8
CDS-3UTR CAA 90 bp GGCCTTGCTGGCAAGCTTCATCTGCTAGGCCCATCCTCAGCTGTCCCCCAGCCCTGGAGGGCTCCACTGTaGGGGACAGCCGCAGCACCG +
Preference number: 5 (lower is better)
Translates to: GLAGKLHLLGPSSAVPQPWRAPL*GTAAAP
Trigger: CGGTGCTGCGGCTGTCCCCAACAGTGGAGCCCTCCA...GGGCTGGGGGACAGCTGAGGATGGGCCTAGCAGATGAAGCTTGCCAGCAAGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CAA 90 bp GGCCTTGCTGGCAAGCTTCATCTGCTAGGCCCATCCTCAGCTGTCCCCCAGCCCTCGCGGGAGACATGGTaGGCCCGCCTAGGTGGCTCC +
Preference number: 5 (lower is better)
Translates to: GLAGKLHLLGPSSAVPQPSRETW*ARLGGS
Trigger: GGAGCCACCTAGGCGGGCCAACCATGTCTCCCGCGA...GGGCTGGGGGACAGCTGAGGATGGGCCTAGCAGATGAAGCTTGCCAGCAAGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CAA 90 bp CTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTGGCAGGAGTGGGGGCGGTGGCTaGGGCCAGCTGCCCGGAGCT +
Preference number: 5 (lower is better)
Translates to: LHRSPPGVHGRKKAECGRSGGGG*GQLPGA
Trigger: AGCTCCGGGCAGCTGGCCCAAGCCACCGCCCCCACT...CCTGCCACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313400.9
ENST00000361209.6
CDS GCA 90 bp GCTCCTGGAGAGTGGGGGCGGTGGCTTGGGCCAGCTGCCCGGAGCTaGTCATGGAGACGTGGAAGTACAAGGTGCCATTCTCCAGCCACT +
Preference number: 5 (lower is better)
Translates to: APGEWGRWLGPAARS*SWRRGSTRCHSPAT
Trigger: AGTGGCTGGAGAATGGCACCTTGTACTTCCACGTCTCCATGAGCAGCTCCGGGCAGCTGGCCCAAGCCACCGCCCCCACTCTCCAGGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000361477.8
CDS GCA 90 bp ATCTCCGAGGGCTCCTGGAGAGTGGGGGCGGTGGCTTGGGCCAGCTaGCCGGAGCTGCTCATGGAGACGTGGAAGTACAAGGTGCCATTC +
Preference number: 5 (lower is better)
Translates to: ISEGSWRVGAVAWAS*PELLMETWKYKVPF
Trigger: GAATGGCACCTTGTACTTCCACGTCTCCATGAGCAGCTCCGGGCAGCTGGCCCAAGCCACCGCCCCCACTCTCCAGGAGCCCTCGGAGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000361477.8
CDS CCA 90 bp CCCACCCAGGCCCCAGGATCCAGGAGAATACTGCTCCCCCTCCCATaGAGAGTCTCTGTGCTCACGGAGGGCAATACCCTCCCTCACCGG +
Preference number: 5 (lower is better)
Translates to: PTQAPGSRRILLPLP*RVSVLTEGNTLPHR
Trigger: CCGGTGAGGGAGGGTATTGCCCTCCGTGAGCACAGAGACTCTCCATGGGAGGGGGAGCAGTATTCTCCTGGATCCTGGGGCCTGGGTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CAA 90 bp CCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTGGCAGGGCTCAGCTGCTCCTaGCCTGGCCGGCGGCAAAGG +
Preference number: 5 (lower is better)
Translates to: PSIGLLQGSMAGRKQSVAGLSCS*PGRRQR
Trigger: CCTTTGCCGCCGGCCAGGCAAGGAGCAGCTGAGCCC...TGCCACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CAA 90 bp CAGGGACTCTGGGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCCCACAAACTTCGCGGGAGACATGGTaGGCCCGCCTAGGTGGCTCC +
Preference number: 5 (lower is better)
Translates to: QGLWADPQVAGRGRVPQTSRETW*ARLGGS
Trigger: GGAGCCACCTAGGCGGGCCAACCATGTCTCCCGCGA...AGTTTGTGGGACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCCCAGAGTCCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CAA 90 bp CCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTGGCACCTTGCCCCGCGCGCTaGGGGCCAGCTGCACGACAA +
Preference number: 5 (lower is better)
Translates to: PSIGLLQGSMAGRKQSVAPCPAR*GPAARQ
Trigger: TTGTCGTGCAGCTGGCCCCAAGCGCGCGGGGCAAGG...TGCCACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000341734.8
CDS TCA 90 bp ACTGGTGTGGGGCTCAGCTGCTCCTTGCCTGGCCGGCGGCAAAGGTaGCAGGTAGATGGACAGCGCCCCTTCTCCTCACAGCGAATCTCC +
Preference number: 5 (lower is better)
Translates to: TGVGLSCSLPGRRQR*QVDGQRPFSSQRIS
Trigger: GGAGATTCGCTGTGAGGAGAAGGGGCGCTGTCCATCTACCTGTCACCTTTGCCGCCGGCCAGGCAAGGAGCAGCTGAGCCCCACACCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000358637.4
ENST00000361209.6
ENST00000361477.8
ENST00000373986.7
CDS CCA 90 bp TCCTCAACAATCTCCGAGGGCTCCTGGAGAGTGGGGGCGGTGGCTTaGGCCAGCTGCCCGGAGCTGCTCATGGAGACGTGGAAGTACAAG +
Preference number: 5 (lower is better)
Translates to: SSTISEGSWRVGAVA*ASCPELLMETWKYK
Trigger: CTTGTACTTCCACGTCTCCATGAGCAGCTCCGGGCAGCTGGCCCAAGCCACCGCCCCCACTCTCCAGGAGCCCTCGGAGATTGTTGAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000361477.8
CDS CCA 90 bp TCCAGGATGGGAGTCTCCCGGATGGGCACGCCAATGACGGAATTGTaGGTTTGCAGCCGGGATGAACGGAAGCTCTCCCGCGCCTGGGGA +
Preference number: 5 (lower is better)
Translates to: SRMGVSRMGTPMTEL*VCSRDERKLSRAWG
Trigger: TCCCCAGGCGCGGGAGAGCTTCCGTTCATCCCGGCTGCAAACCCACAATTCCGTCATTGGCGTGCCCATCCGGGAGACTCCCATCCTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000361477.8
CDS-3UTR CAA 90 bp GGCCTGCAGGGACTCTGGGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCCCATCAGGTTTGAGGCACTaGGGGCCCTCGCAGACATCT +
Preference number: 5 (lower is better)
Translates to: GLQGLWADPQVAGRGRVPSGLRH*GPSQTS
Trigger: AGATGTCTGCGAGGGCCCCAAGTGCCTCAAACCTGA...TGGGACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCCCAGAGTCCCTGCAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS CCA 90 bp GTTGATTTCCAGCAGCACTGGTGTGGGGCTCAGCTGCTCCTTGCCTaGCCGGCGGCAAAGGTGACAGGTAGATGGACAGCGCCCCTTCTC +
Preference number: 5 (lower is better)
Translates to: VDFQQHWCGAQLLLA*PAAKVTGRWTAPLL
Trigger: GAGAAGGGGCGCTGTCCATCTACCTGTCACCTTTGCCGCCGGCCAGGCAAGGAGCAGCTGAGCCCCACACCAGTGCTGCTGGAAATCAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000358637.4
ENST00000361209.6
ENST00000361477.8
ENST00000373986.7
CDS CCA 90 bp CTTGCTCCTCCGCTTCCTCTTCCCTGCCGATGTGCTGCGCAGGGGTaGTTGCAGCTGACCGATCTCGATGGGCGTGTTAGCGCGGAAACT +
Preference number: 5 (lower is better)
Translates to: LAPPLPLPCRCAAQG*LQLTDLDGRVSAET
Trigger: AGTTTCCGCGCTAACACGCCCATCGAGATCGGTCAGCTGCAACCACCCCTGCGCAGCACATCGGCAGGGAAGAGGAAGCGGAGGAGCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313400.9
ENST00000373986.7
CDS CCA 90 bp GGCCTCTGTGGGCGGCCCGGCCGCCTTTCCAGAAGATTTATGTCCTaGAGGCTCATAAAGGATTCCAGGAGGCTGGGCCCCAGCTCATCC +
Preference number: 5 (lower is better)
Translates to: GLCGRPGRLSRRFMS*RLIKDSRRLGPSSS
Trigger: GGATGAGCTGGGGCCCAGCCTCCTGGAATCCTTTATGAGCCTCCAGGACATAAATCTTCTGGAAAGGCGGCCGGGCCGCCCACAGAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417725.1
CDS-3UTR CAA 90 bp CTGCAGGGACTCTGGGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCCCACAACTTTTCAGCAAACCTTaGCTGCGGCGGCGACTGCGG +
Preference number: 5 (lower is better)
Translates to: LQGLWADPQVAGRGRVPQLFSKP*LRRRLR
Trigger: CCGCAGTCGCCGCCGCAGCAAAGGTTTGCTGAAAAG...TTGTGGGACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCCCAGAGTCCCTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CAA 90 bp GGCCTGCAGGGACTCTGGGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCCCAGACACACACTTGAAGTaGCGAGTGCAGCCCCCATTG +
Preference number: 5 (lower is better)
Translates to: GLQGLWADPQVAGRGRVPDTHLK*RVQPPL
Trigger: CAATGGGGGCTGCACTCGCAACTTCAAGTGTGTGTC...TGGGACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCCCAGAGTCCCTGCAGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CAA 90 bp GGCCTTGCTGGCAAGCTTCATCTGCTAGGCCCATCCTCAGCTGTCCCCCAGCCCTCAGGTTTGAGGCACTaGGGGCCCTCGCAGACATCT +
Preference number: 5 (lower is better)
Translates to: GLAGKLHLLGPSSAVPQPSGLRH*GPSQTS
Trigger: AGATGTCTGCGAGGGCCCCAAGTGCCTCAAACCTGA...GGGCTGGGGGACAGCTGAGGATGGGCCTAGCAGATGAAGCTTGCCAGCAAGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CAA 90 bp GGCCTGCAGGGACTCTGGGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCCCAAATTTGGAGTCAGGTTaGAGGCACTTGGGGCCCTCG +
Preference number: 5 (lower is better)
Translates to: GLQGLWADPQVAGRGRVPNLESG*RHLGPS
Trigger: CGAGGGCCCCAAGTGCCTCAAACCTGACTCCAAATT...TGGGACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCCCAGAGTCCCTGCAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CAA 90 bp ACAGGCCTGCAGGGACTCTGGGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCCTGGAAGACTTGGCCTaGGTTCACATGCTGGGTCCG +
Preference number: 5 (lower is better)
Translates to: TGLQGLWADPQVAGRGRVLEDLA*VHMLGP
Trigger: CGGACCCAGCATGTGAACCAAGGCCAAGTCTTCCAG...GACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCCCAGAGTCCCTGCAGGCCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS TCA 90 bp CGCTTCCTCTTCCCTGCCGATGTGCTGCGCAGGGGTGGTTGCAGCTaGCCGATCTCGATGGGCGTGTTAGCGCGGAAACTCTCCTTGAAC +
Preference number: 5 (lower is better)
Translates to: RFLFPADVLRRGGCS*PISMGVLARKLSLN
Trigger: GTTCAAGGAGAGTTTCCGCGCTAACACGCCCATCGAGATCGGTCAGCTGCAACCACCCCTGCGCAGCACATCGGCAGGGAAGAGGAAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313400.9
ENST00000373986.7
CDS CCA 90 bp GCACTGTTTCCACGCGGCTCTGGATGTAGGCACTCCGCAGGAGGCTaGAGCAGTGGCTACTCACCCTCTCCAGTCGCCGTAGAATCAGGT +
Preference number: 5 (lower is better)
Translates to: ALFPRGSGCRHSAGG*SSGYSPSPVAVESG
Trigger: ACCTGATTCTACGGCGACTGGAGAGGGTGAGTAGCCACTGCTCCAGCCTCCTGCGGAGTGCCTACATCCAGAGCCGCGTGGAAACAGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000361477.8
ENST00000373986.7
CDS CCA 90 bp TTCTCTTCCCCTGGATGTCCCAGACTGTCCAGAGTGTGGGTCACCTaGCTGCCAAACTCGTCCTCGCGGGAGACATGGTTGGCCCGCCTA +
Preference number: 5 (lower is better)
Translates to: FSSPGCPRLSRVWVT*LPNSSSRETWLARL
Trigger: TAGGCGGGCCAACCATGTCTCCCGCGAGGACGAGTTTGGCAGCCAGGTGACCCACACTCTGGACAGTCTGGGACATCCAGGGGAAGAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000361477.8
ENST00000373986.7
CDS-3UTR CAA 90 bp CCTCAGAGCTTCCTTCCTGGTGCTGAAGAGGTCAAAACTGTCTCCTCTAGGGGTGGGCTCAGCTGCTCCTaGCCTGGCCGGCGGCAAAGG +
Preference number: 5 (lower is better)
Translates to: PQSFLPGAEEVKTVSSRGGLSCS*PGRRQR
Trigger: CCTTTGCCGCCGGCCAGGCAAGGAGCAGCTGAGCCC...ACCCCTAGAGGAGACAGTTTTGACCTCTTCAGCACCAGGAAGGAAGCTCTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CAA 90 bp CAAAGGCCGCTTGGTCTCCACCTGAAAACTTCTGCCTCGGGATTGACAGCCATCTGGAGGGCTCCACTGTaGGGGACAGCCGCAGCACCG +
Preference number: 5 (lower is better)
Translates to: QRPLGLHLKTSASGLTAIWRAPL*GTAAAP
Trigger: CGGTGCTGCGGCTGTCCCCAACAGTGGAGCCCTCCA...GATGGCTGTCAATCCCGAGGCAGAAGTTTTCAGGTGGAGACCAAGCGGCCTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CAA 90 bp GCAAAGGCCGCTTGGTCTCCACCTGAAAACTTCTGCCTCGGGATTGACAGCCATTGGAGGGCTCCACTGTaGGGGACAGCCGCAGCACCG +
Preference number: 5 (lower is better)
Translates to: AKAAWSPPENFCLGIDSHWRAPL*GTAAAP
Trigger: CGGTGCTGCGGCTGTCCCCAACAGTGGAGCCCTCCA...ATGGCTGTCAATCCCGAGGCAGAAGTTTTCAGGTGGAGACCAAGCGGCCTTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CAA 90 bp GGCCTGCAGGGACTCTGGGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCCCAACGTGTTTCGGGCCATaGACACCATCTTCTCCTCAC +
Preference number: 5 (lower is better)
Translates to: GLQGLWADPQVAGRGRVPTCFGP*TPSSPH
Trigger: GTGAGGAGAAGATGGTGTCAATGGCCCGAAACACGT...TGGGACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCCCAGAGTCCCTGCAGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CAA 90 bp ACAGGCCTGCAGGGACTCTGGGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCACGCCAATGACGGAATaGTGGGTTTGCAGCCGGGAT +
Preference number: 5 (lower is better)
Translates to: TGLQGLWADPQVAGRGRVTPMTE*WVCSRD
Trigger: ATCCCGGCTGCAAACCCACAATTCCGTCATTGGCGT...GACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCCCAGAGTCCCTGCAGGCCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313400.9
ENST00000361209.6
CDS-3UTR CAA 90 bp ACAGGCCTGCAGGGACTCTGGGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCGCGCGGAAACTCTCCTaGAACTTCTGCATCAGGGAC +
Preference number: 5 (lower is better)
Translates to: TGLQGLWADPQVAGRGRVARKLS*NFCIRD
Trigger: GTCCCTGATGCAGAAGTTCAAGGAGAGTTTCCGCGC...GACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCCCAGAGTCCCTGCAGGCCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313400.9
ENST00000373986.7
CDS-3UTR CAA 90 bp CTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTGGCAGGGCTGCGCAGGGGTGGTaGCAGCTGACCGATCTCGAT +
Preference number: 5 (lower is better)
Translates to: LHRSPPGVHGRKKAECGRAAQGW*QLTDLD
Trigger: ATCGAGATCGGTCAGCTGCAACCACCCCTGCGCAGC...CCTGCCACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313400.9
ENST00000373986.7
CDS-3UTR CAA 90 bp GGCCTGCAGGGACTCTGGGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCCCAGGAACCACAAAGCTTTaGCTGACAGGAAGCCAGAGG +
Preference number: 5 (lower is better)
Translates to: GLQGLWADPQVAGRGRVPGTTKL*LTGSQR
Trigger: CCTCTGGCTTCCTGTCAGCAAAAGCTTTGTGGTTCC...TGGGACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCCCAGAGTCCCTGCAGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CAA 90 bp CTGCAGGGACTCTGGGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCCCACAAATCTCCAGTGAGCAGTaGGAGGTCTGGAAGGGGCTC +
Preference number: 5 (lower is better)
Translates to: LQGLWADPQVAGRGRVPQISSEQ*EVWKGL
Trigger: GAGCCCCTTCCAGACCTCCAACTGCTCACTGGAGAT...TTGTGGGACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCCCAGAGTCCCTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS GCA 90 bp AGCGCGATGAGGCCACCCATCACAGAAATGTGGAGGATGTGCATCTaGTCCTCAACAATCTCCGAGGGCTCCTGGAGAGTGGGGGCGGTG +
Preference number: 5 (lower is better)
Translates to: SAMRPPITEMWRMCI*SSTISEGSWRVGAV
Trigger: CACCGCCCCCACTCTCCAGGAGCCCTCGGAGATTGTTGAGGAGCAGATGCACATCCTCCACATTTCTGTGATGGGTGGCCTCATCGCGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000361477.8
CDS CCA 90 bp GATGAGGGTATAAAGTGGCACCACACGGTTGATTTCCAGCAGCACTaGTGTGGGGCTCAGCTGCTCCTTGCCTGGCCGGCGGCAAAGGTG +
Preference number: 5 (lower is better)
Translates to: DEGIKWHHTVDFQQH*CGAQLLLAWPAAKV
Trigger: CACCTTTGCCGCCGGCCAGGCAAGGAGCAGCTGAGCCCCACACCAGTGCTGCTGGAAATCAACCGTGTGGTGCCACTTTATACCCTCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000358637.4
ENST00000361209.6
ENST00000361477.8
ENST00000373986.7
CDS CCA 90 bp GAGTCTCTGTGCTCACGGAGGGCAATACCCTCCCTCACCGGCCCTTaGACTCCCCGTACGTGTTTCGGGCCATTGACACCATCTTCTCCT +
Preference number: 5 (lower is better)
Translates to: ESLCSRRAIPSLTGP*TPRTCFGPLTPSSP
Trigger: AGGAGAAGATGGTGTCAATGGCCCGAAACACGTACGGGGAGTCCAAGGGCCGGTGAGGGAGGGTATTGCCCTCCGTGAGCACAGAGACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CAA 90 bp GGGTCAGGTCAAAACTGTCCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAGGGGGCTGCAGTaGGGGAGCCCATTGGCATCA +
Preference number: 5 (lower is better)
Translates to: GSGQNCPSIGLLQGSMAGRRGLQ*GSPLAS
Trigger: TGATGCCAATGGGCTCCCCAACTGCAGCCCCCTTCT...TCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGGACAGTTTTGACCTGACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CAA 90 bp CTCAGAGCTTCCTTCCTGGTGCTGAAGAGGTCAAAACTGTCTCCTCTAGGGGTCTGGAGGGCTCCACTGTaGGGGACAGCCGCAGCACCG +
Preference number: 5 (lower is better)
Translates to: LRASFLVLKRSKLSPLGVWRAPL*GTAAAP
Trigger: CGGTGCTGCGGCTGTCCCCAACAGTGGAGCCCTCCA...GACCCCTAGAGGAGACAGTTTTGACCTCTTCAGCACCAGGAAGGAAGCTCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CAA 90 bp AGAAGAGCAAAGGCCGCTTGGTCTCCACCTGAAAACTTCTGCCTCGGGATTGACTGGAGGGCTCCACTGTaGGGGACAGCCGCAGCACCG +
Preference number: 5 (lower is better)
Translates to: RRAKAAWSPPENFCLGIDWRAPL*GTAAAP
Trigger: CGGTGCTGCGGCTGTCCCCAACAGTGGAGCCCTCCA...GTCAATCCCGAGGCAGAAGTTTTCAGGTGGAGACCAAGCGGCCTTTGCTCTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CAA 90 bp ACAGGCCTGCAGGGACTCTGGGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCGAGAAACCGTTTGCTTaGGCCTTGCTGGCAAGCTTC +
Preference number: 5 (lower is better)
Translates to: TGLQGLWADPQVAGRGRVEKPFA*ALLASF
Trigger: GAAGCTTGCCAGCAAGGCCAAAGCAAACGGTTTCTC...GACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCCCAGAGTCCCTGCAGGCCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CAA 90 bp CCTCAGAGCTTCCTTCCTGGTGCTGAAGAGGTCAAAACTGTCTCCTCTAGGGGTTCGCGGGAGACATGGTaGGCCCGCCTAGGTGGCTCC +
Preference number: 5 (lower is better)
Translates to: PQSFLPGAEEVKTVSSRGSRETW*ARLGGS
Trigger: GGAGCCACCTAGGCGGGCCAACCATGTCTCCCGCGA...ACCCCTAGAGGAGACAGTTTTGACCTCTTCAGCACCAGGAAGGAAGCTCTGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CAA 90 bp CAGGGACTCTGGGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCCCACAAACTCGGTCAGACACACACTaGAAGTTGCGAGTGCAGCCC +
Preference number: 5 (lower is better)
Translates to: QGLWADPQVAGRGRVPQTRSDTH*KLRVQP
Trigger: GGGCTGCACTCGCAACTTCAAGTGTGTGTCTGACCG...AGTTTGTGGGACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCCCAGAGTCCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS GCA 90 bp AGCAGCAGCGCGATGAGGCCACCCATCACAGAAATGTGGAGGATGTaGATCTGCTCCTCAACAATCTCCGAGGGCTCCTGGAGAGTGGGG +
Preference number: 5 (lower is better)
Translates to: SSSAMRPPITEMWRM*ICSSTISEGSWRVG
Trigger: CCCCACTCTCCAGGAGCCCTCGGAGATTGTTGAGGAGCAGATGCACATCCTCCACATTTCTGTGATGGGTGGCCTCATCGCGCTGCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000361477.8
CDS CCA 90 bp AGCAGCAGCAGCAGCAGCGCGATGAGGCCACCCATCACAGAAATGTaGAGGATGTGCATCTGCTCCTCAACAATCTCCGAGGGCTCCTGG +
Preference number: 5 (lower is better)
Translates to: SSSSSSAMRPPITEM*RMCICSSTISEGSW
Trigger: CCAGGAGCCCTCGGAGATTGTTGAGGAGCAGATGCACATCCTCCACATTTCTGTGATGGGTGGCCTCATCGCGCTGCTGCTGCTGCTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000361477.8
CDS CCA 90 bp AAGTCCACCTTCTCTTCCCCTGGATGTCCCAGACTGTCCAGAGTGTaGGTCACCTGGCTGCCAAACTCGTCCTCGCGGGAGACATGGTTG +
Preference number: 5 (lower is better)
Translates to: KSTFSSPGCPRLSRV*VTWLPNSSSRETWL
Trigger: CAACCATGTCTCCCGCGAGGACGAGTTTGGCAGCCAGGTGACCCACACTCTGGACAGTCTGGGACATCCAGGGGAAGAGAAGGTGGACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000361477.8
ENST00000373986.7
CDS-3UTR CAA 90 bp GGCCTGCAGGGACTCTGGGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCCCACCCCAGAATGGAAGTTaGATTTTTCCGTTGGCCCAT +
Preference number: 5 (lower is better)
Translates to: GLQGLWADPQVAGRGRVPPQNGS*IFPLAH
Trigger: ATGGGCCAACGGAAAAATCAAACTTCCATTCTGGGG...TGGGACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCCCAGAGTCCCTGCAGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000288520.9
CDS-3UTR CAA 90 bp GGCCCCAGGATCCAGGAGAATACTGCTCCCCCTCCCATGGAGAGTCTCTGTGCTATGAAGGGCATGGACTaGAGCTCCTTCTTGCTGCCC +
Preference number: 5 (lower is better)
Translates to: GPRIQENTAPPPMESLCAMKGMD*SSFLLP
Trigger: GGGCAGCAAGAAGGAGCTCAAGTCCATGCCCTTCAT...AGCACAGAGACTCTCCATGGGAGGGGGAGCAGTATTCTCCTGGATCCTGGGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CAA 90 bp TTGCCCAAAGCTTCCAATGCCTTGCCAAGCTCCCAGCCTCACCTTTTAACACTTGGGCTCAGCTGCTCCTaGCCTGGCCGGCGGCAAAGG +
Preference number: 5 (lower is better)
Translates to: LPKASNALPSSQPHLLTLGLSCS*PGRRQR
Trigger: CCTTTGCCGCCGGCCAGGCAAGGAGCAGCTGAGCCC...AAGTGTTAAAAGGTGAGGCTGGGAGCTTGGCAAGGCATTGGAAGCTTTGGGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313400.9
CDS-3UTR CAA 90 bp GGTCTCCACCTGAAAACTTCTGCCTCGGGATTGACAGCCATCCATAAGAAAAGGGGGCTCAGCTGCTCCTaGCCTGGCCGGCGGCAAAGG +
Preference number: 5 (lower is better)
Translates to: GLHLKTSASGLTAIHKKRGLSCS*PGRRQR
Trigger: CCTTTGCCGCCGGCCAGGCAAGGAGCAGCTGAGCCC...CCTTTTCTTATGGATGGCTGTCAATCCCGAGGCAGAAGTTTTCAGGTGGAGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CAA 90 bp AGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTGGCAGGAAGAAGAGAAGGGGGCTGCAGTaGGGGAGCCCATTGGCATCA +
Preference number: 5 (lower is better)
Translates to: RSPPGVHGRKKAECGRKKRRGLQ*GSPLAS
Trigger: TGATGCCAATGGGCTCCCCAACTGCAGCCCCCTTCT...CTTCTTCCTGCCACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CAA 90 bp CAGGGACTCTGGGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCCCACAAACTCCGTTTGCTTTGGCCTaGCTGGCAAGCTTCATCTGC +
Preference number: 5 (lower is better)
Translates to: QGLWADPQVAGRGRVPQTPFALA*LASFIC
Trigger: GCAGATGAAGCTTGCCAGCAAGGCCAAAGCAAACGG...AGTTTGTGGGACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCCCAGAGTCCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CAA 90 bp GGCCCCAGGATCCAGGAGAATACTGCTCCCCCTCCCATGGAGAGTCTCTGTGCTCCGTTTGCTTTGGCCTaGCTGGCAAGCTTCATCTGC +
Preference number: 5 (lower is better)
Translates to: GPRIQENTAPPPMESLCAPFALA*LASFIC
Trigger: GCAGATGAAGCTTGCCAGCAAGGCCAAAGCAAACGG...AGCACAGAGACTCTCCATGGGAGGGGGAGCAGTATTCTCCTGGATCCTGGGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CAA 90 bp GGCCTGCAGGGACTCTGGGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCCCAACTTCTGCCTCGGGATaGACAGCCATCCATAAGAAA +
Preference number: 5 (lower is better)
Translates to: GLQGLWADPQVAGRGRVPTSASG*TAIHKK
Trigger: TTTCTTATGGATGGCTGTCAATCCCGAGGCAGAAGT...TGGGACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCCCAGAGTCCCTGCAGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CAA 90 bp AAGAGAGAGAAGTCCTTAAAGACCCATGCTTCCTCACTGCAACCATCCTCAGAGAGTGGGGGCGGTGGCTaGGGCCAGCTGCCCGGAGCT +
Preference number: 5 (lower is better)
Translates to: KREKSLKTHASSLQPSSESGGGG*GQLPGA
Trigger: AGCTCCGGGCAGCTGGCCCAAGCCACCGCCCCCACT...CTCTGAGGATGGTTGCAGTGAGGAAGCATGGGTCTTTAAGGACTTCTCTCTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313400.9
ENST00000361209.6
CDS-3UTR CAA 90 bp TTGCTTTGGCCTTGCTGGCAAGCTTCATCTGCTAGGCCCATCCTCAGCTGTCCCGAGTGGCTTCTGTGCTaGCGCTCTTCTGGGGGATGC +
Preference number: 5 (lower is better)
Translates to: LLWPCWQASSARPILSCPEWLLC*RSSGGC
Trigger: GCATCCCCCAGAAGAGCGCAAGCACAGAAGCCACTC...GGGACAGCTGAGGATGGGCCTAGCAGATGAAGCTTGCCAGCAAGGCCAAAGCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313400.9
ENST00000361209.6
CDS-3UTR CAA 90 bp CCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTGGCAGGCATCTGTCGTCCTTaGTCCACAGAGGTCCCTCAC +
Preference number: 5 (lower is better)
Translates to: PSIGLLQGSMAGRKQSVAGICRP*STEVPH
Trigger: GTGAGGGACCTCTGTGGACAAAGGACGACAGATGCC...TGCCACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CAA 90 bp CTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTGGCAGGCCATCAGGAGCCAGTTaGTACTCCTCCACGCAACCG +
Preference number: 5 (lower is better)
Translates to: LHRSPPGVHGRKKAECGRPSGAS*YSSTQP
Trigger: CGGTTGCGTGGAGGAGTACAAACTGGCTCCTGATGG...CCTGCCACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CAA 90 bp GGGTCAGGTCAAAACTGTCCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGATCAGGTTTGAGGCACTaGGGGCCCTCGCAGACATCT +
Preference number: 5 (lower is better)
Translates to: GSGQNCPSIGLLQGSMAGSGLRH*GPSQTS
Trigger: AGATGTCTGCGAGGGCCCCAAGTGCCTCAAACCTGA...TCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGGACAGTTTTGACCTGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CAA 90 bp GGCCCCAGGATCCAGGAGAATACTGCTCCCCCTCCCATGGAGAGTCTCTGTGCTAATTTGGAGTCAGGTTaGAGGCACTTGGGGCCCTCG +
Preference number: 5 (lower is better)
Translates to: GPRIQENTAPPPMESLCANLESG*RHLGPS
Trigger: CGAGGGCCCCAAGTGCCTCAAACCTGACTCCAAATT...AGCACAGAGACTCTCCATGGGAGGGGGAGCAGTATTCTCCTGGATCCTGGGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CAA 90 bp GGGTCAGGTCAAAACTGTCCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAATCTCCAGTGAGCAGTaGGAGGTCTGGAAGGGGCTC +
Preference number: 5 (lower is better)
Translates to: GSGQNCPSIGLLQGSMAGISSEQ*EVWKGL
Trigger: GAGCCCCTTCCAGACCTCCAACTGCTCACTGGAGAT...TCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGGACAGTTTTGACCTGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS TCA 90 bp GGCACACACATCCCGAGGAATCCACCTGCCGGTCAGACACACACTTaGAGTTGCGAGTGCAGCCCCCATTGTTCCGAGAGCAGTCACGAA +
Preference number: 5 (lower is better)
Translates to: GTHIPRNPPAGQTHT*SCECSPHCSESSHE
Trigger: TTCGTGACTGCTCTCGGAACAATGGGGGCTGCACTCGCAACTTCAAGTGTGTGTCTGACCGGCAGGTGGATTCCTCGGGATGTGTGTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000361477.8
ENST00000373986.7
CDS TCA 90 bp AGCCATAGAGGGCCTCTGCGATGTAGTGGGAGCCATAGTGCTGGATaGAGGACAGCAGCTCCTCCCGACTGCTCTCCTTGGTCAGGATCT +
Preference number: 5 (lower is better)
Translates to: SHRGPLRCSGSHSAG*RTAAPPDCSPWSGS
Trigger: AGATCCTGACCAAGGAGAGCAGTCGGGAGGAGCTGCTGTCCTTCATCCAGCACTATGGCTCCCACTACATCGCAGAGGCCCTCTATGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000361477.8
ENST00000373986.7
CDS GCA 90 bp ATGGGTTTCAGCTCCTCAGGGCACACACATCCCGAGGAATCCACCTaGCGGTCAGACACACACTTGAAGTTGCGAGTGCAGCCCCCATTG +
Preference number: 5 (lower is better)
Translates to: MGFSSSGHTHPEEST*RSDTHLKLRVQPPL
Trigger: CAATGGGGGCTGCACTCGCAACTTCAAGTGTGTGTCTGACCGGCAGGTGGATTCCTCGGGATGTGTGTGCCCTGAGGAGCTGAAACCCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000361477.8
ENST00000373986.7
CDS CCA 90 bp TGCTCCTCCACCGGCAGCGGGATCACCAACAGCCCATCGGCCAGCTaGGGAAAGTCCTTGATGAAGTTGTTCTCCCTAAAGGTCATCTGG +
Preference number: 5 (lower is better)
Translates to: CSSTGSGITNSPSAS*GKSLMKLFSLKVIW
Trigger: CCAGATGACCTTTAGGGAGAACAACTTCATCAAGGACTTTCCCCAGCTGGCCGATGGGCTGTTGGTGATCCCGCTGCCGGTGGAGGAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000361477.8
ENST00000373986.7
CDS-3UTR CAA 90 bp CCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTGGCAATGAAGGGCATGGACTaGAGCTCCTTCTTGCTGCCC +
Preference number: 5 (lower is better)
Translates to: PSIGLLQGSMAGRKQSVAMKGMD*SSFLLP
Trigger: GGGCAGCAAGAAGGAGCTCAAGTCCATGCCCTTCAT...TGCCACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CAA 90 bp GGCCCCAGGATCCAGGAGAATACTGCTCCCCCTCCCATGGAGAGTCTCTGTGCTCTCATCAGTGCACTCTaGAAGGCCTCCTTTGTGCCA +
Preference number: 5 (lower is better)
Translates to: GPRIQENTAPPPMESLCALISAL*KASFVP
Trigger: TGGCACAAAGGAGGCCTTCAAGAGTGCACTGATGAG...AGCACAGAGACTCTCCATGGGAGGGGGAGCAGTATTCTCCTGGATCCTGGGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CAA 90 bp CAGGGACTCTGGGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCCCACAAACTCTCATCAGTGCACTCTaGAAGGCCTCCTTTGTGCCA +
Preference number: 5 (lower is better)
Translates to: QGLWADPQVAGRGRVPQTLISAL*KASFVP
Trigger: TGGCACAAAGGAGGCCTTCAAGAGTGCACTGATGAG...AGTTTGTGGGACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCCCAGAGTCCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CAA 90 bp TCAGGTCAAAACTGTCCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAGAAGGGGGCTGCAGTaGGGGAGCCCATTGGCATCA +
Preference number: 5 (lower is better)
Translates to: SGQNCPSIGLLQGSMAGRRRGLQ*GSPLAS
Trigger: TGATGCCAATGGGCTCCCCAACTGCAGCCCCCTTCT...TCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGGACAGTTTTGACCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CAA 90 bp CAAAGGCCGCTTGGTCTCCACCTGAAAACTTCTGCCTCGGGATTGACAGCCATCAGAAGGGGGCTGCAGTaGGGGAGCCCATTGGCATCA +
Preference number: 5 (lower is better)
Translates to: QRPLGLHLKTSASGLTAIRRGLQ*GSPLAS
Trigger: TGATGCCAATGGGCTCCCCAACTGCAGCCCCCTTCT...GATGGCTGTCAATCCCGAGGCAGAAGTTTTCAGGTGGAGACCAAGCGGCCTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CAA 90 bp ACAGGCCTGCAGGGACTCTGGGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCGTGATTTTGGTGTCCTaGAGGATGCTATACCACACC +
Preference number: 5 (lower is better)
Translates to: TGLQGLWADPQVAGRGRVVILVS*RMLYHT
Trigger: GGTGTGGTATAGCATCCTCAAGGACACCAAAATCAC...GACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCCCAGAGTCCCTGCAGGCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CAA 90 bp GGCCCCAGGATCCAGGAGAATACTGCTCCCCCTCCCATGGAGAGTCTCTGTGCTGAGAAACCGTTTGCTTaGGCCTTGCTGGCAAGCTTC +
Preference number: 5 (lower is better)
Translates to: GPRIQENTAPPPMESLCAEKPFA*ALLASF
Trigger: GAAGCTTGCCAGCAAGGCCAAAGCAAACGGTTTCTC...AGCACAGAGACTCTCCATGGGAGGGGGAGCAGTATTCTCCTGGATCCTGGGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CAA 90 bp GGCCTTGCTGGCAAGCTTCATCTGCTAGGCCCATCCTCAGCTGTCCCCCAGCCCACTTCTGCCTCGGGATaGACAGCCATCCATAAGAAA +
Preference number: 5 (lower is better)
Translates to: GLAGKLHLLGPSSAVPQPTSASG*TAIHKK
Trigger: TTTCTTATGGATGGCTGTCAATCCCGAGGCAGAAGT...GGGCTGGGGGACAGCTGAGGATGGGCCTAGCAGATGAAGCTTGCCAGCAAGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CAA 90 bp CCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTGGCAGCGCGGAAACTCTCCTaGAACTTCTGCATCAGGGAC +
Preference number: 5 (lower is better)
Translates to: PSIGLLQGSMAGRKQSVAARKLS*NFCIRD
Trigger: GTCCCTGATGCAGAAGTTCAAGGAGAGTTTCCGCGC...TGCCACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313400.9
ENST00000373986.7
CDS-3UTR CAA 90 bp CAGAGCTTCCTTCCTGGTGCTGAAGAGGTCAAAACTGTCTCCTCTAGGGGTCAGGCTGCGCAGGGGTGGTaGCAGCTGACCGATCTCGAT +
Preference number: 5 (lower is better)
Translates to: QSFLPGAEEVKTVSSRGQAAQGW*QLTDLD
Trigger: ATCGAGATCGGTCAGCTGCAACCACCCCTGCGCAGC...CTGACCCCTAGAGGAGACAGTTTTGACCTCTTCAGCACCAGGAAGGAAGCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000313400.9
ENST00000373986.7
CDS-3UTR CAA 90 bp CAAAGGCCGCTTGGTCTCCACCTGAAAACTTCTGCCTCGGGATTGACAGCCATCGAGCCCGACGTCCCCTaGGCTCTCCCAAAGCTGATT +
Preference number: 5 (lower is better)
Translates to: QRPLGLHLKTSASGLTAIEPDVP*ALPKLI
Trigger: AATCAGCTTTGGGAGAGCCAAGGGGACGTCGGGCTC...GATGGCTGTCAATCCCGAGGCAGAAGTTTTCAGGTGGAGACCAAGCGGCCTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CAA 90 bp GGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCCCACAAACTCAATAATGTCCCTTTTCAGCAAACCTTaGCTGCGGCGGCGACTGCGG +
Preference number: 5 (lower is better)
Translates to: GRPTGSRKRQGPTNSIMSLFSKP*LRRRLR
Trigger: CCGCAGTCGCCGCCGCAGCAAAGGTTTGCTGAAAAG...GGACATTATTGAGTTTGTGGGACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CAA 90 bp CCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTGGCAAGGAAGCCAGAGGCCTaGGCCCAAGCTGAAAGTAGA +
Preference number: 5 (lower is better)
Translates to: PSIGLLQGSMAGRKQSVARKPEA*AQAESR
Trigger: TCTACTTTCAGCTTGGGCCAAGGCCTCTGGCTTCCT...TGCCACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313400.9
ENST00000361209.6
CDS-3UTR CAA 90 bp AAACTGTCCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGCGAGTGCAGCCCCCATaGTTCCGAGAGCAGTCACGA +
Preference number: 5 (lower is better)
Translates to: KLSLHRSPPGVHGRKKAERVQPP*FREQSR
Trigger: TCGTGACTGCTCTCGGAACAATGGGGGCTGCACTCG...CTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGGACAGTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CAA 90 bp GGGTCAGGTCAAAACTGTCCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAATTTGGAGTCAGGTTaGAGGCACTTGGGGCCCTCG +
Preference number: 5 (lower is better)
Translates to: GSGQNCPSIGLLQGSMAGNLESG*RHLGPS
Trigger: CGAGGGCCCCAAGTGCCTCAAACCTGACTCCAAATT...TCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGGACAGTTTTGACCTGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CAA 90 bp GGCCTTGCTGGCAAGCTTCATCTGCTAGGCCCATCCTCAGCTGTCCCCCAGCCCAGCTGGGGAAAGTCCTaGATGAAGTTGTTCTCCCTA +
Preference number: 5 (lower is better)
Translates to: GLAGKLHLLGPSSAVPQPSWGKS*MKLFSL
Trigger: TAGGGAGAACAACTTCATCAAGGACTTTCCCCAGCT...GGGCTGGGGGACAGCTGAGGATGGGCCTAGCAGATGAAGCTTGCCAGCAAGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CAA 90 bp TGTCCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTGATCTCCAGTGAGCAGTaGGAGGTCTGGAAGGGGCTC +
Preference number: 5 (lower is better)
Translates to: CPSIGLLQGSMAGRKQSVISSEQ*EVWKGL
Trigger: GAGCCCCTTCCAGACCTCCAACTGCTCACTGGAGAT...CACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CAA 90 bp CCAGAAAGCGGCAGAGCCCAGGGTTGCACAGTGAGCTTATTAGCAGCACCAGGACGGCAGAGCCCAGGGTaGCACAGTGAGCTTATTAGC +
Preference number: 5 (lower is better)
Translates to: PESGRAQGCTVSLLAAPGRQSPG*HSELIS
Trigger: GCTAATAAGCTCACTGTGCAACCCTGGGCTCTGCCG...TCCTGGTGCTGCTAATAAGCTCACTGTGCAACCCTGGGCTCTGCCGCTTTCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417725.1
CDS TCA 90 bp CCTCCCTCACCGGCCCTTGGACTCCCCGTACGTGTTTCGGGCCATTaGCACCATCTTCTCCTCACACGTGATTTTGGTGTCCTTGAGGAT +
Preference number: 5 (lower is better)
Translates to: PPSPALGLPVRVSGH*HHLLLTRDFGVLED
Trigger: ATCCTCAAGGACACCAAAATCACGTGTGAGGAGAAGATGGTGTCAATGGCCCGAAACACGTACGGGGAGTCCAAGGGCCGGTGAGGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS TCA 90 bp GTACTGCTCCGTGTAGAATGTCAGCTGAGTTTCATCGTCTGCCTCTaGGCCCGACGTCCCCTTGGCTCTCCCAAAGCTGATTCCTCCTCG +
Preference number: 5 (lower is better)
Translates to: VLLRVECQLSFIVCL*ARRPLGSPKADSSS
Trigger: CGAGGAGGAATCAGCTTTGGGAGAGCCAAGGGGACGTCGGGCTCAGAGGCAGACGATGAAACTCAGCTGACATTCTACACGGAGCAGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313400.9
ENST00000373986.7
CDS TCA 90 bp CTGCTGGACCTTCTTGCTGGGAAAGTGGATGATGCAGGTGAGCTCTaGGCCATAGAGGGCCTCTGCGATGTAGTGGGAGCCATAGTGCTG +
Preference number: 5 (lower is better)
Translates to: LLDLLAGKVDDAGEL*AIEGLCDVVGAIVL
Trigger: CAGCACTATGGCTCCCACTACATCGCAGAGGCCCTCTATGGCTCAGAGCTCACCTGCATCATCCACTTTCCCAGCAAGAAGGTCCAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000361477.8
ENST00000373986.7
CDS GCA 90 bp CCTTGTTGTCATCTACCAGTGGACAGGCCGTCCTCAGGGTCACCGTaGTTAGCTCTGAGTGCCTCCCTCGTGTATCCACAGCATACAGAG +
Preference number: 5 (lower is better)
Translates to: PCCHLPVDRPSSGSP*LALSASLVYPQHTE
Trigger: CTCTGTATGCTGTGGATACACGAGGGAGGCACTCAGAGCTAAGCACGGTGACCCTGAGGACGGCCTGTCCACTGGTAGATGACAACAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000361477.8
ENST00000373986.7
CDS CCA 90 bp CGCCTCAGCTGCTGCTTTCTTCTCAAAGTCCACCTTCTCTTCCCCTaGATGTCCCAGACTGTCCAGAGTGTGGGTCACCTGGCTGCCAAA +
Preference number: 5 (lower is better)
Translates to: RLSCCFLLKVHLLFP*MSQTVQSVGHLAAK
Trigger: TTTGGCAGCCAGGTGACCCACACTCTGGACAGTCTGGGACATCCAGGGGAAGAGAAGGTGGACTTTGAGAAGAAAGCAGCAGCTGAGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313400.9
ENST00000373986.7
CDS CCA 90 bp CTCACAGGCATCTGTCGTCCTTTGTCCACAGAGGTCCCTCACCCATaGGGAGGTGGCATTGATCTGGTAATACAGGGAAAGCTTGGCCGG +
Preference number: 5 (lower is better)
Translates to: LTGICRPLSTEVPHP*GGGIDLVIQGKLGR
Trigger: CCGGCCAAGCTTTCCCTGTATTACCAGATCAATGCCACCTCCCCATGGGTGAGGGACCTCTGTGGACAAAGGACGACAGATGCCTGTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000361477.8
ENST00000373986.7
CDS CCA 90 bp AGATATCCTCCAGGAGACATTACTGAGTGGATTGCCTGGCCTCTGTaGGCGGCCCGGCCGCCTTTCCAGAAGATTTATGTCCTGGAGGCT +
Preference number: 5 (lower is better)
Translates to: RYPPGDITEWIAWPL*AARPPFQKIYVLEA
Trigger: AGCCTCCAGGACATAAATCTTCTGGAAAGGCGGCCGGGCCGCCCACAGAGGCCAGGCAATCCACTCAGTAATGTCTCCTGGAGGATATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417725.1
CDS-3UTR CAA 90 bp GGCCTGCAGGGACTCTGGGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCCCATGTTCATGGATAAACTaGTCTCTAGTGCAGCTCTCT +
Preference number: 5 (lower is better)
Translates to: GLQGLWADPQVAGRGRVPCSWIN*SLVQLS
Trigger: AGAGAGCTGCACTAGAGACAAGTTTATCCATGAACA...TGGGACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCCCAGAGTCCCTGCAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288520.9
CDS-3UTR CAA 90 bp TTGCTTTGGCCTTGCTGGCAAGCTTCATCTGCTAGGCCCATCCTCAGCTGTCCCAGTGGCACCACACGGTaGATTTCCAGCAGCACTGGT +
Preference number: 5 (lower is better)
Translates to: LLWPCWQASSARPILSCPSGTTR*ISSSTG
Trigger: ACCAGTGCTGCTGGAAATCAACCGTGTGGTGCCACT...GGGACAGCTGAGGATGGGCCTAGCAGATGAAGCTTGCCAGCAAGGCCAAAGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CAA 90 bp ACAGGCCTGCAGGGACTCTGGGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCCTTTGTGCCATTGTCTaGGATGAGGGTATAAAGTGG +
Preference number: 5 (lower is better)
Translates to: TGLQGLWADPQVAGRGRVLCAIV*DEGIKW
Trigger: CCACTTTATACCCTCATCCAAGACAATGGCACAAAG...GACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCCCAGAGTCCCTGCAGGCCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CAA 90 bp AGAAGAGCAAAGGCCGCTTGGTCTCCACCTGAAAACTTCTGCCTCGGGATTGACAGAAGGGGGCTGCAGTaGGGGAGCCCATTGGCATCA +
Preference number: 5 (lower is better)
Translates to: RRAKAAWSPPENFCLGIDRRGLQ*GSPLAS
Trigger: TGATGCCAATGGGCTCCCCAACTGCAGCCCCCTTCT...GTCAATCCCGAGGCAGAAGTTTTCAGGTGGAGACCAAGCGGCCTTTGCTCTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CAA 90 bp ACAGGCCTGCAGGGACTCTGGGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCGCTATTTCTTCTGCCTaGTTGTCATCTACCAGTGGA +
Preference number: 5 (lower is better)
Translates to: TGLQGLWADPQVAGRGRVAISSA*LSSTSG
Trigger: TCCACTGGTAGATGACAACAAGGCAGAAGAAATAGC...GACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCCCAGAGTCCCTGCAGGCCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CAA 90 bp CTGCAGGGACTCTGGGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCCCACAAGTGATTTTGGTGTCCTaGAGGATGCTATACCACACC +
Preference number: 5 (lower is better)
Translates to: LQGLWADPQVAGRGRVPQVILVS*RMLYHT
Trigger: GGTGTGGTATAGCATCCTCAAGGACACCAAAATCAC...TTGTGGGACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCCCAGAGTCCCTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CAA 90 bp GGGTCAGGTCAAAACTGTCCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAACGTGTTTCGGGCCATaGACACCATCTTCTCCTCAC +
Preference number: 5 (lower is better)
Translates to: GSGQNCPSIGLLQGSMAGTCFGP*TPSSPH
Trigger: GTGAGGAGAAGATGGTGTCAATGGCCCGAAACACGT...TCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGGACAGTTTTGACCTGACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CAA 90 bp CTCAGAGCTTCCTTCCTGGTGCTGAAGAGGTCAAAACTGTCTCCTCTAGGGGTCGAGCCCGACGTCCCCTaGGCTCTCCCAAAGCTGATT +
Preference number: 5 (lower is better)
Translates to: LRASFLVLKRSKLSPLGVEPDVP*ALPKLI
Trigger: AATCAGCTTTGGGAGAGCCAAGGGGACGTCGGGCTC...GACCCCTAGAGGAGACAGTTTTGACCTCTTCAGCACCAGGAAGGAAGCTCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CAA 90 bp AGAAGAGCAAAGGCCGCTTGGTCTCCACCTGAAAACTTCTGCCTCGGGATTGACCTTTTCAGCAAACCTTaGCTGCGGCGGCGACTGCGG +
Preference number: 5 (lower is better)
Translates to: RRAKAAWSPPENFCLGIDLFSKP*LRRRLR
Trigger: CCGCAGTCGCCGCCGCAGCAAAGGTTTGCTGAAAAG...GTCAATCCCGAGGCAGAAGTTTTCAGGTGGAGACCAAGCGGCCTTTGCTCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CAA 90 bp CCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTGGCAGGAACCACAAAGCTTTaGCTGACAGGAAGCCAGAGG +
Preference number: 5 (lower is better)
Translates to: PSIGLLQGSMAGRKQSVAGTTKL*LTGSQR
Trigger: CCTCTGGCTTCCTGTCAGCAAAAGCTTTGTGGTTCC...TGCCACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CAA 90 bp CAGAGCTTCCTTCCTGGTGCTGAAGAGGTCAAAACTGTCTCCTCTAGGGGTCAGCGAGTGCAGCCCCCATaGTTCCGAGAGCAGTCACGA +
Preference number: 5 (lower is better)
Translates to: QSFLPGAEEVKTVSSRGQRVQPP*FREQSR
Trigger: TCGTGACTGCTCTCGGAACAATGGGGGCTGCACTCG...CTGACCCCTAGAGGAGACAGTTTTGACCTCTTCAGCACCAGGAAGGAAGCTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CAA 90 bp TTGCTTTGGCCTTGCTGGCAAGCTTCATCTGCTAGGCCCATCCTCAGCTGTCCCGACACACACTTGAAGTaGCGAGTGCAGCCCCCATTG +
Preference number: 5 (lower is better)
Translates to: LLWPCWQASSARPILSCPDTHLK*RVQPPL
Trigger: CAATGGGGGCTGCACTCGCAACTTCAAGTGTGTGTC...GGGACAGCTGAGGATGGGCCTAGCAGATGAAGCTTGCCAGCAAGGCCAAAGCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CAA 90 bp CAAAGGCCGCTTGGTCTCCACCTGAAAACTTCTGCCTCGGGATTGACAGCCATCCGGTCAGACACACACTaGAAGTTGCGAGTGCAGCCC +
Preference number: 5 (lower is better)
Translates to: QRPLGLHLKTSASGLTAIRSDTH*KLRVQP
Trigger: GGGCTGCACTCGCAACTTCAAGTGTGTGTCTGACCG...GATGGCTGTCAATCCCGAGGCAGAAGTTTTCAGGTGGAGACCAAGCGGCCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CAA 90 bp TCAGGTCAAAACTGTCCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGACCATCAGGAGCCAGTTaGTACTCCTCCACGCAACCG +
Preference number: 5 (lower is better)
Translates to: SGQNCPSIGLLQGSMAGRPSGAS*YSSTQP
Trigger: CGGTTGCGTGGAGGAGTACAAACTGGCTCCTGATGG...TCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGGACAGTTTTGACCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CAA 90 bp GGCCTTGCTGGCAAGCTTCATCTGCTAGGCCCATCCTCAGCTGTCCCCCAGCCCTCCTTGGTCAGGATCTaGAGAACATTAGTGAAGCCT +
Preference number: 5 (lower is better)
Translates to: GLAGKLHLLGPSSAVPQPSLVRI*RTLVKP
Trigger: AGGCTTCACTAATGTTCTCAAGATCCTGACCAAGGA...GGGCTGGGGGACAGCTGAGGATGGGCCTAGCAGATGAAGCTTGCCAGCAAGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CAA 90 bp ACAGGCCTGCAGGGACTCTGGGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCCTCAAGCACATTCCCTaGGTAAGAAATACCACCCAA +
Preference number: 5 (lower is better)
Translates to: TGLQGLWADPQVAGRGRVLKHIP*VRNTTQ
Trigger: TTGGGTGGTATTTCTTACCAAGGGAATGTGCTTGAG...GACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCCCAGAGTCCCTGCAGGCCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313400.9
CDS-3UTR CAA 90 bp CTGTCCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTAAAGCTTCCAATGCCTaGCCAAGCTCCCAGCCTCAC +
Preference number: 5 (lower is better)
Translates to: LSLHRSPPGVHGRKKAECKASNA*PSSQPH
Trigger: GTGAGGCTGGGAGCTTGGCAAGGCATTGGAAGCTTT...ACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313400.9
CDS-3UTR CAA 90 bp TTGCTTTGGCCTTGCTGGCAAGCTTCATCTGCTAGGCCCATCCTCAGCTGTCCCATGGCACCCCTCTCTTaGGGGCCTTCTCCAATCCAT +
Preference number: 5 (lower is better)
Translates to: LLWPCWQASSARPILSCPMAPLS*GPSPIH
Trigger: ATGGATTGGAGAAGGCCCCAAAGAGAGGGGTGCCAT...GGGACAGCTGAGGATGGGCCTAGCAGATGAAGCTTGCCAGCAAGGCCAAAGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313400.9
CDS GCA 90 bp ACACGTGATTTTGGTGTCCTTGAGGATGCTATACCACACCATGCCTaGAGGCCGGACCTCCTCGCTGCGGCAGAAAAGATAGGGCACTGT +
Preference number: 5 (lower is better)
Translates to: TRDFGVLEDAIPHHA*RPDLLAAAEKIGHC
Trigger: ACAGTGCCCTATCTTTTCTGCCGCAGCGAGGAGGTCCGGCCTGCAGGCATGGTGTGGTATAGCATCCTCAAGGACACCAAAATCACGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000361477.8
ENST00000373986.7
CDS CCA 90 bp TGCTATGAAGTGCTCGGGCACATGCAGAGTCACCTTCACAGTGAGTaGACAAGACATCTGGCTGCCACACACCATGGCCAGGATGCAGGA +
Preference number: 5 (lower is better)
Translates to: CYEVLGHMQSHLHSE*TRHLAATHHGQDAG
Trigger: TCCTGCATCCTGGCCATGGTGTGTGGCAGCCAGATGTCTTGTCCACTCACTGTGAAGGTGACTCTGCATGTGCCCGAGCACTTCATAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000361477.8
ENST00000373986.7
CDS-3UTR CAA 90 bp AGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTGGCAGGAAGAAGACGTGTTTCGGGCCATaGACACCATCTTCTCCTCAC +
Preference number: 5 (lower is better)
Translates to: RSPPGVHGRKKAECGRKKTCFGP*TPSSPH
Trigger: GTGAGGAGAAGATGGTGTCAATGGCCCGAAACACGT...CTTCTTCCTGCCACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CAA 90 bp AAACTGTCCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGCCGTTTGCTTTGGCCTaGCTGGCAAGCTTCATCTGC +
Preference number: 5 (lower is better)
Translates to: KLSLHRSPPGVHGRKKAEPFALA*LASFIC
Trigger: GCAGATGAAGCTTGCCAGCAAGGCCAAAGCAAACGG...CTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGGACAGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CAA 90 bp TTGCTTTGGCCTTGCTGGCAAGCTTCATCTGCTAGGCCCATCCTCAGCTGTCCCCACAGGAGAAACCGTTaGCTTTGGCCTTGCTGGCAA +
Preference number: 5 (lower is better)
Translates to: LLWPCWQASSARPILSCPHRRNR*LWPCWQ
Trigger: TTGCCAGCAAGGCCAAAGCAAACGGTTTCTCCTGTG...GGGACAGCTGAGGATGGGCCTAGCAGATGAAGCTTGCCAGCAAGGCCAAAGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CAA 90 bp GGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCCCACAAACTCAATAATGTCCATTCCTCCTCGAGACTaGCTCCTCCGCTTCCTCTTC +
Preference number: 5 (lower is better)
Translates to: GRPTGSRKRQGPTNSIMSIPPRD*LLRFLF
Trigger: GAAGAGGAAGCGGAGGAGCAAGTCTCGAGGAGGAAT...GGACATTATTGAGTTTGTGGGACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313400.9
ENST00000373986.7
CDS-3UTR CAA 90 bp ATCCACAGGAGAAACCGTTTGCTTTGGCCTTGCTGGCAAGCTTCATCTGCTAGGGAGCCCGACGTCCCCTaGGCTCTCCCAAAGCTGATT +
Preference number: 5 (lower is better)
Translates to: IHRRNRLLWPCWQASSAREPDVP*ALPKLI
Trigger: AATCAGCTTTGGGAGAGCCAAGGGGACGTCGGGCTC...CCTAGCAGATGAAGCTTGCCAGCAAGGCCAAAGCAAACGGTTTCTCCTGTGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CAA 90 bp GGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCCCACAAACTCAATAATGTCCAGGAAGCCAGAGGCCTaGGCCCAAGCTGAAAGTAGA +
Preference number: 5 (lower is better)
Translates to: GRPTGSRKRQGPTNSIMSRKPEA*AQAESR
Trigger: TCTACTTTCAGCTTGGGCCAAGGCCTCTGGCTTCCT...GGACATTATTGAGTTTGTGGGACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313400.9
ENST00000361209.6
CDS-3UTR CAA 90 bp CAGAGCTTCCTTCCTGGTGCTGAAGAGGTCAAAACTGTCTCCTCTAGGGGTCAGCTGGAAGACTTGGCCTaGGTTCACATGCTGGGTCCG +
Preference number: 5 (lower is better)
Translates to: QSFLPGAEEVKTVSSRGQLEDLA*VHMLGP
Trigger: CGGACCCAGCATGTGAACCAAGGCCAAGTCTTCCAG...CTGACCCCTAGAGGAGACAGTTTTGACCTCTTCAGCACCAGGAAGGAAGCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CAA 90 bp TGTCCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTGGGTCATCTGGAAGACTaGGCCTTGGTTCACATGCTG +
Preference number: 5 (lower is better)
Translates to: CPSIGLLQGSMAGRKQSVGHLED*ALVHML
Trigger: CAGCATGTGAACCAAGGCCAAGTCTTCCAGATGACC...CACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS TCA 90 bp ATGGACAGCGCCCCTTCTCCTCACAGCGAATCTCCACACCTGAAATaGGCTGGTCATCTGACAGCATCTGGGCTGTCAGCAAACCTGAGA +
Preference number: 5 (lower is better)
Translates to: MDSAPSPHSESPHLK*AGHLTASGLSANLR
Trigger: TCTCAGGTTTGCTGACAGCCCAGATGCTGTCAGATGACCAGCTCATTTCAGGTGTGGAGATTCGCTGTGAGGAGAAGGGGCGCTGTCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000358637.4
ENST00000361209.6
ENST00000361477.8
ENST00000373986.7
CDS TCA 90 bp GCTGAGGTCACACCTGCACCAGTCATCGATCACATCCCCTTTCCCTaGGCACCAGTAGGAACTCATCAGTGCACTCTTGAAGGCCTCCTT +
Preference number: 5 (lower is better)
Translates to: AEVTPAPVIDHIPFP*APVGTHQCTLEGLL
Trigger: AAGGAGGCCTTCAAGAGTGCACTGATGAGTTCCTACTGGTGCTCAGGGAAAGGGGATGTGATCGATGACTGGTGCAGGTGTGACCTCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000358637.4
ENST00000361209.6
ENST00000361477.8
ENST00000373986.7
CDS TCA 90 bp GTACTGCTCCGTGTAGAATGTCAGCTGAGTTTCATCGTCTGCCTCTaGGCCCGACGTCCCCTTGGCTCTCCCAAAGCTGATTCCTCCTTT +
Preference number: 5 (lower is better)
Translates to: VLLRVECQLSFIVCL*ARRPLGSPKADSSF
Trigger: AAAGGAGGAATCAGCTTTGGGAGAGCCAAGGGGACGTCGGGCTCAGAGGCAGACGATGAAACTCAGCTGACATTCTACACGGAGCAGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361209.6
ENST00000361477.8
CDS GCA 90 bp CTCACCACGAAGCTGCTTCCATCTGCTATGAAGTGCTCGGGCACATaGAGAGTCACCTTCACAGTGAGTGGACAAGACATCTGGCTGCCA +
Preference number: 5 (lower is better)
Translates to: LTTKLLPSAMKCSGT*RVTFTVSGQDIWLP
Trigger: TGGCAGCCAGATGTCTTGTCCACTCACTGTGAAGGTGACTCTGCATGTGCCCGAGCACTTCATAGCAGATGGAAGCAGCTTCGTGGTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000361477.8
ENST00000373986.7
CDS-3UTR CAA 90 bp CTCAGAGCTTCCTTCCTGGTGCTGAAGAGGTCAAAACTGTCTCCTCTAGGGGTCAGTGGCACCACACGGTaGATTTCCAGCAGCACTGGT +
Preference number: 5 (lower is better)
Translates to: LRASFLVLKRSKLSPLGVSGTTR*ISSSTG
Trigger: ACCAGTGCTGCTGGAAATCAACCGTGTGGTGCCACT...GACCCCTAGAGGAGACAGTTTTGACCTCTTCAGCACCAGGAAGGAAGCTCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CAA 90 bp AGGAGAAACCGTTTGCTTTGGCCTTGCTGGCAAGCTTCATCTGCTAGGCCCATCAGTGGCACCACACGGTaGATTTCCAGCAGCACTGGT +
Preference number: 5 (lower is better)
Translates to: RRNRLLWPCWQASSARPISGTTR*ISSSTG
Trigger: ACCAGTGCTGCTGGAAATCAACCGTGTGGTGCCACT...GATGGGCCTAGCAGATGAAGCTTGCCAGCAAGGCCAAAGCAAACGGTTTCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CAA 90 bp CAAAGGCCGCTTGGTCTCCACCTGAAAACTTCTGCCTCGGGATTGACAGCCATCCTCATCAGTGCACTCTaGAAGGCCTCCTTTGTGCCA +
Preference number: 5 (lower is better)
Translates to: QRPLGLHLKTSASGLTAILISAL*KASFVP
Trigger: TGGCACAAAGGAGGCCTTCAAGAGTGCACTGATGAG...GATGGCTGTCAATCCCGAGGCAGAAGTTTTCAGGTGGAGACCAAGCGGCCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CAA 90 bp TCAGGTCAAAACTGTCCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGACTCATCAGTGCACTCTaGAAGGCCTCCTTTGTGCCA +
Preference number: 5 (lower is better)
Translates to: SGQNCPSIGLLQGSMAGRLISAL*KASFVP
Trigger: TGGCACAAAGGAGGCCTTCAAGAGTGCACTGATGAG...TCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGGACAGTTTTGACCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CAA 90 bp CCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTGGCATCCTCACACGTGATTTaGGTGTCCTTGAGGATGCTA +
Preference number: 5 (lower is better)
Translates to: PSIGLLQGSMAGRKQSVASSHVI*VSLRML
Trigger: TAGCATCCTCAAGGACACCAAAATCACGTGTGAGGA...TGCCACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CAA 90 bp CTCAGAGCTTCCTTCCTGGTGCTGAAGAGGTCAAAACTGTCTCCTCTAGGGGTCACGCCAATGACGGAATaGTGGGTTTGCAGCCGGGAT +
Preference number: 5 (lower is better)
Translates to: LRASFLVLKRSKLSPLGVTPMTE*WVCSRD
Trigger: ATCCCGGCTGCAAACCCACAATTCCGTCATTGGCGT...GACCCCTAGAGGAGACAGTTTTGACCTCTTCAGCACCAGGAAGGAAGCTCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313400.9
ENST00000361209.6
CDS-3UTR CAA 90 bp AGAAGAGCAAAGGCCGCTTGGTCTCCACCTGAAAACTTCTGCCTCGGGATTGACATTCCTCCTCGAGACTaGCTCCTCCGCTTCCTCTTC +
Preference number: 5 (lower is better)
Translates to: RRAKAAWSPPENFCLGIDIPPRD*LLRFLF
Trigger: GAAGAGGAAGCGGAGGAGCAAGTCTCGAGGAGGAAT...GTCAATCCCGAGGCAGAAGTTTTCAGGTGGAGACCAAGCGGCCTTTGCTCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313400.9
ENST00000373986.7
CDS-3UTR CAA 90 bp GGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCCCACAAACTCAATAATGTCCAGTGTCAGGGCTGTCTaGTTCACTGGGCTTTTCAGC +
Preference number: 5 (lower is better)
Translates to: GRPTGSRKRQGPTNSIMSSVRAV*FTGLFS
Trigger: GCTGAAAAGCCCAGTGAACAAGACAGCCCTGACACT...GGACATTATTGAGTTTGTGGGACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CAA 90 bp CAGAGCTTCCTTCCTGGTGCTGAAGAGGTCAAAACTGTCTCCTCTAGGGGTCAGGACACACACTTGAAGTaGCGAGTGCAGCCCCCATTG +
Preference number: 5 (lower is better)
Translates to: QSFLPGAEEVKTVSSRGQDTHLK*RVQPPL
Trigger: CAATGGGGGCTGCACTCGCAACTTCAAGTGTGTGTC...CTGACCCCTAGAGGAGACAGTTTTGACCTCTTCAGCACCAGGAAGGAAGCTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CAA 90 bp TCAGGTCAAAACTGTCCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAGGTCATCTGGAAGACTaGGCCTTGGTTCACATGCTG +
Preference number: 5 (lower is better)
Translates to: SGQNCPSIGLLQGSMAGRGHLED*ALVHML
Trigger: CAGCATGTGAACCAAGGCCAAGTCTTCCAGATGACC...TCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGGACAGTTTTGACCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CAA 90 bp GGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCCCACAAACTCAATAATGTCCGGTCATCTGGAAGACTaGGCCTTGGTTCACATGCTG +
Preference number: 5 (lower is better)
Translates to: GRPTGSRKRQGPTNSIMSGHLED*ALVHML
Trigger: CAGCATGTGAACCAAGGCCAAGTCTTCCAGATGACC...GGACATTATTGAGTTTGTGGGACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CAA 90 bp AAACTGTCCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGCTGCTGGACCTTCTaGCTGGGAAAGTGGATGATG +
Preference number: 5 (lower is better)
Translates to: KLSLHRSPPGVHGRKKAECCWTF*LGKWMM
Trigger: CATCATCCACTTTCCCAGCAAGAAGGTCCAGCAGCA...CTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGGACAGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CAA 90 bp CACAGGAGAAACCGTTTGCTTTGGCCTTGCTGGCAAGCTTCATCTGCTAGGCCCTGCTGCTGGACCTTCTaGCTGGGAAAGTGGATGATG +
Preference number: 5 (lower is better)
Translates to: HRRNRLLWPCWQASSARPCCWTF*LGKWMM
Trigger: CATCATCCACTTTCCCAGCAAGAAGGTCCAGCAGCA...GGGCCTAGCAGATGAAGCTTGCCAGCAAGGCCAAAGCAAACGGTTTCTCCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS CCA 90 bp CTTGAAGGCCTCCTTTGTGCCATTGTCTTGGATGAGGGTATAAAGTaGCACCACACGGTTGATTTCCAGCAGCACTGGTGTGGGGCTCAG +
Preference number: 5 (lower is better)
Translates to: LEGLLCAIVLDEGIK*HHTVDFQQHWCGAQ
Trigger: CTGAGCCCCACACCAGTGCTGCTGGAAATCAACCGTGTGGTGCCACTTTATACCCTCATCCAAGACAATGGCACAAAGGAGGCCTTCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000358637.4
ENST00000361209.6
ENST00000361477.8
ENST00000373986.7
CDS-3UTR CAA 90 bp AAACTGTCTCCTCTAGGGGTCAGGTCAAAACTGTCCCTCCATAGGTCTCCTCCAAGTGGCACCACACGGTaGATTTCCAGCAGCACTGGT +
Preference number: 5 (lower is better)
Translates to: KLSPLGVRSKLSLHRSPPSGTTR*ISSSTG
Trigger: ACCAGTGCTGCTGGAAATCAACCGTGTGGTGCCACT...TGGAGGAGACCTATGGAGGGACAGTTTTGACCTGACCCCTAGAGGAGACAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CAA 90 bp CTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTGGCAGGCTTTGTGCCATTGTCTaGGATGAGGGTATAAAGTGG +
Preference number: 5 (lower is better)
Translates to: LHRSPPGVHGRKKAECGRLCAIV*DEGIKW
Trigger: CCACTTTATACCCTCATCCAAGACAATGGCACAAAG...CCTGCCACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CAA 90 bp CTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTGGCAGGATTTCTTCTGCCTTGTaGTCATCTACCAGTGGACAG +
Preference number: 5 (lower is better)
Translates to: LHRSPPGVHGRKKAECGRISSAL*SSTSGQ
Trigger: CTGTCCACTGGTAGATGACAACAAGGCAGAAGAAAT...CCTGCCACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CAA 90 bp CTGTCCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTTCCTCACACGTGATTTaGGTGTCCTTGAGGATGCTA +
Preference number: 5 (lower is better)
Translates to: LSLHRSPPGVHGRKKAECSSHVI*VSLRML
Trigger: TAGCATCCTCAAGGACACCAAAATCACGTGTGAGGA...ACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CAA 90 bp AGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTGGCAGGAAGAAGTCCTCACACGTGATTTaGGTGTCCTTGAGGATGCTA +
Preference number: 5 (lower is better)
Translates to: RSPPGVHGRKKAECGRKKSSHVI*VSLRML
Trigger: TAGCATCCTCAAGGACACCAAAATCACGTGTGAGGA...CTTCTTCCTGCCACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CAA 90 bp CAGAGCTTCCTTCCTGGTGCTGAAGAGGTCAAAACTGTCTCCTCTAGGGGTCAGGAGAAACCGTTTGCTTaGGCCTTGCTGGCAAGCTTC +
Preference number: 5 (lower is better)
Translates to: QSFLPGAEEVKTVSSRGQEKPFA*ALLASF
Trigger: GAAGCTTGCCAGCAAGGCCAAAGCAAACGGTTTCTC...CTGACCCCTAGAGGAGACAGTTTTGACCTCTTCAGCACCAGGAAGGAAGCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CAA 90 bp AGGAGAAACCGTTTGCTTTGGCCTTGCTGGCAAGCTTCATCTGCTAGGCCCATCCACAGGAGAAACCGTTaGCTTTGGCCTTGCTGGCAA +
Preference number: 5 (lower is better)
Translates to: RRNRLLWPCWQASSARPIHRRNR*LWPCWQ
Trigger: TTGCCAGCAAGGCCAAAGCAAACGGTTTCTCCTGTG...GATGGGCCTAGCAGATGAAGCTTGCCAGCAAGGCCAAAGCAAACGGTTTCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CAA 90 bp CTCAGAGCTTCCTTCCTGGTGCTGAAGAGGTCAAAACTGTCTCCTCTAGGGGTCCACAGGAGAAACCGTTaGCTTTGGCCTTGCTGGCAA +
Preference number: 5 (lower is better)
Translates to: LRASFLVLKRSKLSPLGVHRRNR*LWPCWQ
Trigger: TTGCCAGCAAGGCCAAAGCAAACGGTTTCTCCTGTG...GACCCCTAGAGGAGACAGTTTTGACCTCTTCAGCACCAGGAAGGAAGCTCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CAA 90 bp CTGTCCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTACTTCTGCCTCGGGATaGACAGCCATCCATAAGAAA +
Preference number: 5 (lower is better)
Translates to: LSLHRSPPGVHGRKKAECTSASG*TAIHKK
Trigger: TTTCTTATGGATGGCTGTCAATCCCGAGGCAGAAGT...ACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CAA 90 bp AAGAGAGAGAAGTCCTTAAAGACCCATGCTTCCTCACTGCAACCATCCTCAGAGGAGTGGCTTCTGTGCTaGCGCTCTTCTGGGGGATGC +
Preference number: 5 (lower is better)
Translates to: KREKSLKTHASSLQPSSEEWLLC*RSSGGC
Trigger: GCATCCCCCAGAAGAGCGCAAGCACAGAAGCCACTC...CTCTGAGGATGGTTGCAGTGAGGAAGCATGGGTCTTTAAGGACTTCTCTCTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313400.9
ENST00000361209.6
CDS-3UTR CAA 90 bp AGGAGAAACCGTTTGCTTTGGCCTTGCTGGCAAGCTTCATCTGCTAGGCCCATCAGTGTCAGGGCTGTCTaGTTCACTGGGCTTTTCAGC +
Preference number: 5 (lower is better)
Translates to: RRNRLLWPCWQASSARPISVRAV*FTGLFS
Trigger: GCTGAAAAGCCCAGTGAACAAGACAGCCCTGACACT...GATGGGCCTAGCAGATGAAGCTTGCCAGCAAGGCCAAAGCAAACGGTTTCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CAA 90 bp AGAGAAGTCCTTAAAGACCCATGCTTCCTCACTGCAACCATCCTCAGAGCTTCCGGCATCTGTCGTCCTTaGTCCACAGAGGTCCCTCAC +
Preference number: 5 (lower is better)
Translates to: REVLKDPCFLTATILRASGICRP*STEVPH
Trigger: GTGAGGGACCTCTGTGGACAAAGGACGACAGATGCC...GGAAGCTCTGAGGATGGTTGCAGTGAGGAAGCATGGGTCTTTAAGGACTTCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CAA 90 bp CTCAGAGCTTCCTTCCTGGTGCTGAAGAGGTCAAAACTGTCTCCTCTAGGGGTCGGAACCACAAAGCTTTaGCTGACAGGAAGCCAGAGG +
Preference number: 5 (lower is better)
Translates to: LRASFLVLKRSKLSPLGVGTTKL*LTGSQR
Trigger: CCTCTGGCTTCCTGTCAGCAAAAGCTTTGTGGTTCC...GACCCCTAGAGGAGACAGTTTTGACCTCTTCAGCACCAGGAAGGAAGCTCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CAA 90 bp AGAGAAGTCCTTAAAGACCCATGCTTCCTCACTGCAACCATCCTCAGAGCTTCCCGGTCAGACACACACTaGAAGTTGCGAGTGCAGCCC +
Preference number: 5 (lower is better)
Translates to: REVLKDPCFLTATILRASRSDTH*KLRVQP
Trigger: GGGCTGCACTCGCAACTTCAAGTGTGTGTCTGACCG...GGAAGCTCTGAGGATGGTTGCAGTGAGGAAGCATGGGTCTTTAAGGACTTCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CAA 90 bp CTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTGGCAGGAGGGTATCATTGAATTaGGAGTCAGGTTTGAGGCAC +
Preference number: 5 (lower is better)
Translates to: LHRSPPGVHGRKKAECGRRVSLN*ESGLRH
Trigger: GTGCCTCAAACCTGACTCCAAATTCAATGATACCCT...CCTGCCACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CAA 90 bp CTGTCCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTAGCTGGGGAAAGTCCTaGATGAAGTTGTTCTCCCTA +
Preference number: 5 (lower is better)
Translates to: LSLHRSPPGVHGRKKAECSWGKS*MKLFSL
Trigger: TAGGGAGAACAACTTCATCAAGGACTTTCCCCAGCT...ACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CAA 90 bp CAGAGCTTCCTTCCTGGTGCTGAAGAGGTCAAAACTGTCTCCTCTAGGGGTCAGTGCTGCTGGACCTTCTaGCTGGGAAAGTGGATGATG +
Preference number: 5 (lower is better)
Translates to: QSFLPGAEEVKTVSSRGQCCWTF*LGKWMM
Trigger: CATCATCCACTTTCCCAGCAAGAAGGTCCAGCAGCA...CTGACCCCTAGAGGAGACAGTTTTGACCTCTTCAGCACCAGGAAGGAAGCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CAA 90 bp GGCCTTGCTGGCAAGCTTCATCTGCTAGGCCCATCCTCAGCTGTCCCCCAGCCCTTATCAGGAAGGGGATaGTCAATCTCATCAACATTT +
Preference number: 5 (lower is better)
Translates to: GLAGKLHLLGPSSAVPQPLSGRG*SISSTF
Trigger: AAATGTTGATGAGATTGACAATCCCCTTCCTGATAA...GGGCTGGGGGACAGCTGAGGATGGGCCTAGCAGATGAAGCTTGCCAGCAAGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000313400.9
CDS TCA 90 bp AGTGAACTTGTAGAGACCGTCGGGCTCCAGACACTTGAAGATGACTaGGTAGATACTGACTTCAGGGACCTCTCCATGGCTTCGACCAGC +
Preference number: 5 (lower is better)
Translates to: SELVETVGLQTLEDD*VDTDFRDLSMASTS
Trigger: GCTGGTCGAAGCCATGGAGAGGTCCCTGAAGTCAGTATCTACTCAGTCATCTTCAAGTGTCTGGAGCCCGACGGTCTCTACAAGTTCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000361477.8
ENST00000373986.7
CDS GCA 90 bp CTTCAGGGACCTCTCCATGGCTTCGACCAGCTGCTACACAAGATGTaGCCAGGCCAGAGAGTAAGTCATCAGCAAAACTCAGGAATTCTC +
Preference number: 5 (lower is better)
Translates to: LQGPLHGFDQLLHKM*PGQRVSHQQNSGIL
Trigger: GAGAATTCCTGAGTTTTGCTGATGACTTACTCTCTGGCCTGGGCACATCTTGTGTAGCAGCTGGTCGAAGCCATGGAGAGGTCCCTGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000361477.8
ENST00000373986.7
CDS CCA 90 bp GAAGTTGCGAGTGCAGCCCCCATTGTTCCGAGAGCAGTCACGAACTaGCCCGAAGGAAGACAGCAGGTCATTGATGGTTTCAAAGTATGT +
Preference number: 5 (lower is better)
Translates to: EVASAAPIVPRAVTN*PEGRQQVIDGFKVC
Trigger: ACATACTTTGAAACCATCAATGACCTGCTGTCTTCCTTCGGGCCAGTTCGTGACTGCTCTCGGAACAATGGGGGCTGCACTCGCAACTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000361477.8
ENST00000373986.7
CDS CCA 90 bp AAAGCTGATTCCTCCTTTCTTCTCAAAGTCCACCTTCTCTTCCCCTaGATGTCCCAGACTGTCCAGAGTGTGGGTCACCTGGCTGCCAAA +
Preference number: 5 (lower is better)
Translates to: KADSSFLLKVHLLFP*MSQTVQSVGHLAAK
Trigger: TTTGGCAGCCAGGTGACCCACACTCTGGACAGTCTGGGACATCCAGGGGAAGAGAAGGTGGACTTTGAGAAGAAAGGAGGAATCAGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361209.6
ENST00000361477.8
CDS-3UTR CAA 90 bp AGAAAATTCAACATCTGTTTCCAATGGAAACAAAACAGAGCCTTTGCAGCAGACGGGCTCAGCTGCTCCTaGCCTGGCCGGCGGCAAAGG +
Preference number: 5 (lower is better)
Translates to: RKFNICFQWKQNRAFAADGLSCS*PGRRQR
Trigger: CCTTTGCCGCCGGCCAGGCAAGGAGCAGCTGAGCCC...GTCTGCTGCAAAGGCTCTGTTTTGTTTCCATTGGAAACAGATGTTGAATTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358637.4
CDS-3UTR CAA 90 bp AGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTGGCAGGAAGAAGCTTTGTGCCATTGTCTaGGATGAGGGTATAAAGTGG +
Preference number: 5 (lower is better)
Translates to: RSPPGVHGRKKAECGRKKLCAIV*DEGIKW
Trigger: CCACTTTATACCCTCATCCAAGACAATGGCACAAAG...CTTCTTCCTGCCACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CAA 90 bp TGTCCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTGATTTCTTCTGCCTTGTaGTCATCTACCAGTGGACAG +
Preference number: 5 (lower is better)
Translates to: CPSIGLLQGSMAGRKQSVISSAL*SSTSGQ
Trigger: CTGTCCACTGGTAGATGACAACAAGGCAGAAGAAAT...CACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CAA 90 bp AGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTGGCAGGAAGAAGGCTATTTCTTCTGCCTaGTTGTCATCTACCAGTGGA +
Preference number: 5 (lower is better)
Translates to: RSPPGVHGRKKAECGRKKAISSA*LSSTSG
Trigger: TCCACTGGTAGATGACAACAAGGCAGAAGAAATAGC...CTTCTTCCTGCCACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CAA 90 bp AGAGAAGTCCTTAAAGACCCATGCTTCCTCACTGCAACCATCCTCAGAGCTTCCCCGTTTGCTTTGGCCTaGCTGGCAAGCTTCATCTGC +
Preference number: 5 (lower is better)
Translates to: REVLKDPCFLTATILRASPFALA*LASFIC
Trigger: GCAGATGAAGCTTGCCAGCAAGGCCAAAGCAAACGG...GGAAGCTCTGAGGATGGTTGCAGTGAGGAAGCATGGGTCTTTAAGGACTTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CAA 90 bp ATCCACAGGAGAAACCGTTTGCTTTGGCCTTGCTGGCAAGCTTCATCTGCTAGGCACAGGAGAAACCGTTaGCTTTGGCCTTGCTGGCAA +
Preference number: 5 (lower is better)
Translates to: IHRRNRLLWPCWQASSARHRRNR*LWPCWQ
Trigger: TTGCCAGCAAGGCCAAAGCAAACGGTTTCTCCTGTG...CCTAGCAGATGAAGCTTGCCAGCAAGGCCAAAGCAAACGGTTTCTCCTGTGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CAA 90 bp AAGAGAGAGAAGTCCTTAAAGACCCATGCTTCCTCACTGCAACCATCCTCAGAGCCATCAGGAGCCAGTTaGTACTCCTCCACGCAACCG +
Preference number: 5 (lower is better)
Translates to: KREKSLKTHASSLQPSSEPSGAS*YSSTQP
Trigger: CGGTTGCGTGGAGGAGTACAAACTGGCTCCTGATGG...CTCTGAGGATGGTTGCAGTGAGGAAGCATGGGTCTTTAAGGACTTCTCTCTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CAA 90 bp TGTCCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTGAGGGTATCATTGAATTaGGAGTCAGGTTTGAGGCAC +
Preference number: 5 (lower is better)
Translates to: CPSIGLLQGSMAGRKQSVRVSLN*ESGLRH
Trigger: GTGCCTCAAACCTGACTCCAAATTCAATGATACCCT...CACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CAA 90 bp CCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTGGCACCAAAGAGGGTATCATaGAATTTGGAGTCAGGTTTG +
Preference number: 5 (lower is better)
Translates to: PSIGLLQGSMAGRKQSVAPKRVS*NLESGL
Trigger: CAAACCTGACTCCAAATTCAATGATACCCTCTTTGG...TGCCACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CAA 90 bp AAGAGAGAGAAGTCCTTAAAGACCCATGCTTCCTCACTGCAACCATCCTCAGAGCTGGAAGACTTGGCCTaGGTTCACATGCTGGGTCCG +
Preference number: 5 (lower is better)
Translates to: KREKSLKTHASSLQPSSELEDLA*VHMLGP
Trigger: CGGACCCAGCATGTGAACCAAGGCCAAGTCTTCCAG...CTCTGAGGATGGTTGCAGTGAGGAAGCATGGGTCTTTAAGGACTTCTCTCTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CAA 90 bp CCCTCCATAGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTGGCAAAGTCCTTGATGAAGTaGTTCTCCCTAAAGGTCATC +
Preference number: 5 (lower is better)
Translates to: PSIGLLQGSMAGRKQSVAKSLMK*FSLKVI
Trigger: GATGACCTTTAGGGAGAACAACTTCATCAAGGACTT...TGCCACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCTATGGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CAA 90 bp AGGTCTCCTCCAGGGGTCCATGGCAGGAAGAAAGCAGAGTGTGGCAGGAAGAAGTCCTTGGTCAGGATCTaGAGAACATTAGTGAAGCCT +
Preference number: 5 (lower is better)
Translates to: RSPPGVHGRKKAECGRKKSLVRI*RTLVKP
Trigger: AGGCTTCACTAATGTTCTCAAGATCCTGACCAAGGA...CTTCTTCCTGCCACACTCTGCTTTCTTCCTGCCATGGACCCCTGGAGGAGACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CAA 90 bp GGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCCCACAAACTCAATAATGTCCCACCACACCAGCACATaGAGTGCTGTAATTTTCTGC +
Preference number: 5 (lower is better)
Translates to: GRPTGSRKRQGPTNSIMSHHTST*SAVIFC
Trigger: GCAGAAAATTACAGCACTCAATGTGCTGGTGTGGTG...GGACATTATTGAGTTTGTGGGACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313400.9
CDS-3UTR CAA 90 bp GGTCTCCACCTGAAAACTTCTGCCTCGGGATTGACAGCCATCCATAAGAAAAGGCCCAGCTCTGTGGTCTaGAGTGAACTTGAGCAGGTC +
Preference number: 5 (lower is better)
Translates to: GLHLKTSASGLTAIHKKRPSSVV*SELEQV
Trigger: GACCTGCTCAAGTTCACTCAAGACCACAGAGCTGGG...CCTTTTCTTATGGATGGCTGTCAATCCCGAGGCAGAAGTTTTCAGGTGGAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341734.8
CDS-3UTR CAA 90 bp CCTCAGAGCTTCCTTCCTGGTGCTGAAGAGGTCAAAACTGTCTCCTCTAGGGGTATGTGTTTCGGGCCATaGACACCATCTTCTCCTCAC +
Preference number: 5 (lower is better)
Translates to: PQSFLPGAEEVKTVSSRGMCFGP*TPSSPH
Trigger: GTGAGGAGAAGATGGTGTCAATGGCCCGAAACACAT...ACCCCTAGAGGAGACAGTTTTGACCTCTTCAGCACCAGGAAGGAAGCTCTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341734.8
CDS TCA 90 bp GCAGAGTGTACTCCCCAAGTCTGCCTCTGCTGTCGGCCTCCCAGCTaGGTAGGCAAAACATTCCTTTACAGAGCAATGTGTTCATGGATA +
Preference number: 5 (lower is better)
Translates to: AECTPQVCLCCRPPS*VGKTFLYRAMCSWI
Trigger: TATCCATGAACACATTGCTCTGTAAAGGAATGTTTTGCCTACTCAGCTGGGAGGCCGACAGCAGAGGCAGACTTGGGGAGTACACTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288520.9
CDS CCA 90 bp TTTCTTATGCTGCAGAATATAGTCGGAGACCTTGGTCCCAATAGCTaGCTGAACATCCACCCACTCCAAGGAGACCACAGTACTGGAGGG +
Preference number: 5 (lower is better)
Translates to: FLMLQNIVGDLGPNS*LNIHPLQGDHSTGG
Trigger: CCCTCCAGTACTGTGGTCTCCTTGGAGTGGGTGGATGTTCAGCCAGCTATTGGGACCAAGGTCTCCGACTATATTCTGCAGCATAAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000358637.4
ENST00000361209.6
ENST00000361477.8
ENST00000373986.7
CDS-3UTR CAA 90 bp ATGGAAACAAAACAGAGCCTTTGCAGCAGACTAGAAATAGAAGATACCTTCTTCTGGAGGGCTCCACTGTaGGGGACAGCCGCAGCACCG +
Preference number: 5 (lower is better)
Translates to: METKQSLCSRLEIEDTFFWRAPL*GTAAAP
Trigger: CGGTGCTGCGGCTGTCCCCAACAGTGGAGCCCTCCA...GAAGAAGGTATCTTCTATTTCTAGTCTGCTGCAAAGGCTCTGTTTTGTTTCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358637.4
CDS-3UTR CAA 90 bp GCAAAGGCCGCTTGGTCTCCACCTGAAAACTTCTGCCTCGGGATTGACAGCCATATTTCTTCTGCCTTGTaGTCATCTACCAGTGGACAG +
Preference number: 5 (lower is better)
Translates to: AKAAWSPPENFCLGIDSHISSAL*SSTSGQ
Trigger: CTGTCCACTGGTAGATGACAACAAGGCAGAAGAAAT...ATGGCTGTCAATCCCGAGGCAGAAGTTTTCAGGTGGAGACCAAGCGGCCTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CAA 90 bp CAAAGGCCGCTTGGTCTCCACCTGAAAACTTCTGCCTCGGGATTGACAGCCATCATTTCTTCTGCCTTGTaGTCATCTACCAGTGGACAG +
Preference number: 5 (lower is better)
Translates to: QRPLGLHLKTSASGLTAIISSAL*SSTSGQ
Trigger: CTGTCCACTGGTAGATGACAACAAGGCAGAAGAAAT...GATGGCTGTCAATCCCGAGGCAGAAGTTTTCAGGTGGAGACCAAGCGGCCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CAA 90 bp GGCAGACCCACAGGTAGCAGGAAGAGGCAGGGTCCCACAAACTCAATAATGTCCATTTCTTCTGCCTTGTaGTCATCTACCAGTGGACAG +
Preference number: 5 (lower is better)
Translates to: GRPTGSRKRQGPTNSIMSISSAL*SSTSGQ
Trigger: CTGTCCACTGGTAGATGACAACAAGGCAGAAGAAAT...GGACATTATTGAGTTTGTGGGACCCTGCCTCTTCCTGCTACCTGTGGGTCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000341734.8
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CAA 90 bp CACAGGAGAAACCGTTTGCTTTGGCCTTGCTGGCAAGCTTCATCTGCTAGGCCCGCTATTTCTTCTGCCTaGTTGTCATCTACCAGTGGA +
Preference number: 5 (lower is better)
Translates to: HRRNRLLWPCWQASSARPAISSA*LSSTSG
Trigger: TCCACTGGTAGATGACAACAAGGCAGAAGAAATAGC...GGGCCTAGCAGATGAAGCTTGCCAGCAAGGCCAAAGCAAACGGTTTCTCCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288520.9
ENST00000313400.9
ENST00000361209.6
ENST00000373986.7
CDS-3UTR CAA 90 bp GGCAGACCCACAGGTAGCAGGAAGAGGCAGG