Pregenerated sensors for ASTL (Homo sapiens)
Ensembl gene IDs: ENSG00000188886Ensembl transcript IDs: ENST00000342380.3, ENST00000470582.1
Found 52 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | AGTGCTGTGGGCATGGGACCCTCTCCCACGGGGCCTGGGGCCACTTaGGCTGCAGCCGTAGAGTTTGAGGACCCGGGTGATGTCCGAGGC | + |
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Preference number: 5 (lower is better) Translates to: SAVGMGPSPTGPGAT*AAAVEFEDPGDVRG Trigger: GCCTCGGACATCACCCGGGTCCTCAAACTCTACGGCTGCAGCCCAAGTGGCCCCAGGCCCCGTGGGAGAGGGTCCCATGCCCACAGCACT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000342380.3 |
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| CDS TCA 90 bp | GGGACTGTGGGCTTGGTGGACACTCCGGCCAGCCAGGACTGCTCCTaGGCAACACCGGGGGCACCTGCTCCAGGCCTTGATCTTGGGGAG | + |
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Preference number: 5 (lower is better) Translates to: GTVGLVDTPASQDCS*ATPGAPAPGLDLGE Trigger: CTCCCCAAGATCAAGGCCTGGAGCAGGTGCCCCCGGTGTTGCTCAGGAGCAGTCCTGGCTGGCCGGAGTGTCCACCAAGCCCACAGTCCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000342380.3 |
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| CDS CCA 90 bp | ACTCAGGTTCCATCGCTGGCCGATGTGGACACTGGGGGCCCAAAGTaGTGTGATGGTGGGCAGCCCACGCCGGCTGAAGGCGAGCCTCCC | + |
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Preference number: 5 (lower is better) Translates to: TQVPSLADVDTGGPK*CDGGQPTPAEGEPP Trigger: GGGAGGCTCGCCTTCAGCCGGCGTGGGCTGCCCACCATCACACCACTTTGGGCCCCCAGTGTCCACATCGGCCAGCGATGGAACCTGAGT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000342380.3 |
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| CDS GCA 90 bp | ATGCCCCGGCCCTTCTGGAGACACGTGGGCGCCAGGGAGACCACCTaGATCCCTCCACTGCGCCCCACACTCGAGAAGCACCCATACATG | + |
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Preference number: 5 (lower is better) Translates to: MPRPFWRHVGARETT*IPPLRPTLEKHPYM Trigger: CATGTATGGGTGCTTCTCGAGTGTGGGGCGCAGTGGAGGGATGCAGGTGGTCTCCCTGGCGCCCACGTGTCTCCAGAAGGGCCGGGGCAT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000342380.3 |
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| CDS GCA 90 bp | GGGGCTGAGGCAGGGAGGGAGCGCGCCATGCTCACTCACCGTACTTaGTGGAGAGCAGGAAGGGGACCTCCACGACACCACTACCACCCA | + |
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Preference number: 5 (lower is better) Translates to: GAEAGRERAMLTHRT*WRAGRGPPRHHYHP Trigger: TGGGTGGTAGTGGTGTCGTGGAGGTCCCCTTCCTGCTCTCCAGCAAGTACGGTGAGTGAGCATGGCGCGCTCCCTCCCTGCCTCAGCCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000470582.1 |
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| CDS CCA 90 bp | ACCCGGGTGATGTCCGAGGCACTCAGGTTCCATCGCTGGCCGATGTaGACACTGGGGGCCCAAAGTGGTGTGATGGTGGGCAGCCCACGC | + |
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Preference number: 5 (lower is better) Translates to: TRVMSEALRFHRWPM*TLGAQSGVMVGSPR Trigger: GCGTGGGCTGCCCACCATCACACCACTTTGGGCCCCCAGTGTCCACATCGGCCAGCGATGGAACCTGAGTGCCTCGGACATCACCCGGGT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000342380.3 |
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| CDS TCA 90 bp | TTGCAGGAATGTCCTTGTCCCCGGAGGCCTGGGTTCCCTCAGGGGTaGGGCCATCTGGGAAGCTGGTACCACAGGCTCCTGCGCAGCTGG | + |
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Preference number: 5 (lower is better) Translates to: LQECPCPRRPGFPQG*GHLGSWYHRLLRSW Trigger: CCAGCTGCGCAGGAGCCTGTGGTACCAGCTTCCCAGATGGCCTCACCCCTGAGGGAACCCAGGCCTCCGGGGACAAGGACATTCCTGCAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000342380.3 ENST00000470582.1 |
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| CDS CCA 90 bp | GCTGAGGCAGGGAGGGAGCGCGCCATGCTCACTCACCGTACTTGCTaGAGAGCAGGAAGGGGACCTCCACGACACCACTACCACCCATGG | + |
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Preference number: 5 (lower is better) Translates to: AEAGRERAMLTHRTC*RAGRGPPRHHYHPW Trigger: CCATGGGTGGTAGTGGTGTCGTGGAGGTCCCCTTCCTGCTCTCCAGCAAGTACGGTGAGTGAGCATGGCGCGCTCCCTCCCTGCCTCAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000470582.1 |
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| CDS CCA 90 bp | GGACTGGCTGGATTCCTGCTTCTGAAGATGGGACTGTGGGCTTGGTaGACACTCCGGCCAGCCAGGACTGCTCCTGAGCAACACCGGGGG | + |
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Preference number: 5 (lower is better) Translates to: GLAGFLLLKMGLWAW*TLRPARTAPEQHRG Trigger: CCCCCGGTGTTGCTCAGGAGCAGTCCTGGCTGGCCGGAGTGTCCACCAAGCCCACAGTCCCATCTTCAGAAGCAGGAATCCAGCCAGTCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000342380.3 |
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| CDS CCA 90 bp | AGTTTGAGGACCCGGGTGATGTCCGAGGCACTCAGGTTCCATCGCTaGCCGATGTGGACACTGGGGGCCCAAAGTGGTGTGATGGTGGGC | + |
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Preference number: 5 (lower is better) Translates to: SLRTRVMSEALRFHR*PMWTLGAQSGVMVG Trigger: GCCCACCATCACACCACTTTGGGCCCCCAGTGTCCACATCGGCCAGCGATGGAACCTGAGTGCCTCGGACATCACCCGGGTCCTCAAACT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000342380.3 |
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| CDS GCA 90 bp | GGACTGAGGGGCCTCTGGCCTAGGCCCACTCATTGGCACCCTGGATaGTTTCTTCATGCCTGGGACAAACCTCATGGGGAAAGCCGGAGC | + |
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Preference number: 5 (lower is better) Translates to: GLRGLWPRPTHWHPG*FLHAWDKPHGESRS Trigger: GCTCCGGCTTTCCCCATGAGGTTTGTCCCAGGCATGAAGAAAGCATCCAGGGTGCCAATGAGTGGGCCTAGGCCAGAGGCCCCTCAGTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000342380.3 |
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| CDS TCA 90 bp | CTCCACGACACCACTACCACCCATGGGCCATTTGTTGCTGGTTGCTaGCAGCAGTCGGAAGGGACTCGGCCGGATGATGTCCCCCTCGAT | + |
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Preference number: 5 (lower is better) Translates to: LHDTTTTHGPFVAGC*QQSEGTRPDDVPLD Trigger: ATCGAGGGGGACATCATCCGGCCGAGTCCCTTCCGACTGCTGTCAGCAACCAGCAACAAATGGCCCATGGGTGGTAGTGGTGTCGTGGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000342380.3 ENST00000470582.1 |
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| CDS TCA 90 bp | AGCCAGGTAACCCCAGCCCTTTCTCCTTCCAAGGCTGCGCCTGGCTaGGCTCCAGGGAATAGCGGTGTAGGGTGGAGACAACTGAGTCCT | + |
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Preference number: 5 (lower is better) Translates to: SQVTPALSPSKAAPG*APGNSGVGWRQLSP Trigger: AGGACTCAGTTGTCTCCACCCTACACCGCTATTCCCTGGAGCTCAGCCAGGCGCAGCCTTGGAAGGAGAAAGGGCTGGGGTTACCTGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000342380.3 |
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| CDS TCA 90 bp | GGAAAAGGGAAGAGAGGAACACCTGCCGCATTAGGAAGAAGGGGCTaGGGCAGGGAGGGAGCGCGCCATGCTCACTCACCGTACTTGCTG | + |
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Preference number: 5 (lower is better) Translates to: GKGKRGTPAALGRRG*GREGARHAHSPYLL Trigger: CAGCAAGTACGGTGAGTGAGCATGGCGCGCTCCCTCCCTGCCTCAGCCCCTTCTTCCTAATGCGGCAGGTGTTCCTCTCTTCCCTTTTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000470582.1 |
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| CDS CCA 90 bp | TGCTGGAGAGCAGGAAGGGGACCTCCACGACACCACTACCACCCATaGGCCATTTGTTGCTGGTTGCTGACAGCAGTCGGAAGGGACTCG | + |
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Preference number: 5 (lower is better) Translates to: CWRAGRGPPRHHYHP*AICCWLLTAVGRDS Trigger: CGAGTCCCTTCCGACTGCTGTCAGCAACCAGCAACAAATGGCCCATGGGTGGTAGTGGTGTCGTGGAGGTCCCCTTCCTGCTCTCCAGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000342380.3 ENST00000470582.1 |
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| CDS CCA 90 bp | CAGTACCCTTGGGGACTGAGGGGCCTCTGGCCTAGGCCCACTCATTaGCACCCTGGATGCTTTCTTCATGCCTGGGACAAACCTCATGGG | + |
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Preference number: 5 (lower is better) Translates to: QYPWGLRGLWPRPTH*HPGCFLHAWDKPHG Trigger: CCCATGAGGTTTGTCCCAGGCATGAAGAAAGCATCCAGGGTGCCAATGAGTGGGCCTAGGCCAGAGGCCCCTCAGTCCCCAAGGGTACTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000342380.3 |
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| CDS GCA 90 bp | ACCCAAGGCCAGAGACCCCCTACACCCTCCATGGTAGAGCCCTGCTaGCCCTTCAGCAAACAAGACCAAGCCCCAGCAAGACACAGTAAC | + |
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Preference number: 5 (lower is better) Translates to: TQGQRPPTPSMVEPC*PFSKQDQAPARHSN Trigger: GTTACTGTGTCTTGCTGGGGCTTGGTCTTGTTTGCTGAAGGGGCAGCAGGGCTCTACCATGGAGGGTGTAGGGGGTCTCTGGCCTTGGGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000342380.3 |
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| CDS CCA 90 bp | ATGAGCCCTTGGTTAATTGCAGGAATGTCCTTGTCCCCGGAGGCCTaGGTTCCCTCAGGGGTGAGGCCATCTGGGAAGCTGGTACCACAG | + |
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Preference number: 5 (lower is better) Translates to: MSPWLIAGMSLSPEA*VPSGVRPSGKLVPQ Trigger: CTGTGGTACCAGCTTCCCAGATGGCCTCACCCCTGAGGGAACCCAGGCCTCCGGGGACAAGGACATTCCTGCAATTAACCAAGGGCTCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000342380.3 ENST00000470582.1 |
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| CDS CCA 90 bp | TGGCCTAGGCCCACTCATTGGCACCCTGGATGCTTTCTTCATGCCTaGGACAAACCTCATGGGGAAAGCCGGAGCTGGGGCAGAGGAGTA | + |
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Preference number: 5 (lower is better) Translates to: WPRPTHWHPGCFLHA*DKPHGESRSWGRGV Trigger: TACTCCTCTGCCCCAGCTCCGGCTTTCCCCATGAGGTTTGTCCCAGGCATGAAGAAAGCATCCAGGGTGCCAATGAGTGGGCCTAGGCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000342380.3 |
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| CDS GCA 90 bp | CAAAGGAGCCAAGAGGTAGACGACCCAGCTCCACTGGGCAGAGGATaGCCTCCCTACTTGGGGACAGAAGCCACAGGCTTAATCTTCGGA | + |
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Preference number: 5 (lower is better) Translates to: QRSQEVDDPAPLGRG*PPYLGTEATGLIFG Trigger: TCCGAAGATTAAGCCTGTGGCTTCTGTCCCCAAGTAGGGAGGGCATCCTCTGCCCAGTGGAGCTGGGTCGTCTACCTCTTGGCTCCTTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000342380.3 |
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| CDS GCA 90 bp | GTTGGGCTCTCAAAGCCTCCTGGAGAGAAGGGCTGGAGGCTACACTaGTGTAGAACATTCCCCCACACTTGGGCATGTTGGGTGGGATGG | + |
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Preference number: 5 (lower is better) Translates to: VGLSKPPGEKGWRLH*CRTFPHTWACWVGW Trigger: CCATCCCACCCAACATGCCCAAGTGTGGGGGAATGTTCTACAGCAGTGTAGCCTCCAGCCCTTCTCTCCAGGAGGCTTTGAGAGCCCAAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000342380.3 |
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| CDS CCA 90 bp | ATCTTCGGACATCCCCTTGAAATGATTTCTAGGTACACAGCCCCCTaGCAGAGCTGGGCTTCCCTGGACAGGGACTGGCTGGATTCCTGC | + |
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Preference number: 5 (lower is better) Translates to: IFGHPLEMISRYTAP*QSWASLDRDWLDSC Trigger: GCAGGAATCCAGCCAGTCCCTGTCCAGGGAAGCCCAGCTCTGCCAGGGGGCTGTGTACCTAGAAATCATTTCAAGGGGATGTCCGAAGAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000342380.3 |
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| CDS GCA 72 bp | GCAGAGATAGGGAGGCCGGAGCGGGGCTCCTACCAGTaGTGTGGGCATGGGACCCTCTCCCACGGGGCCTGG | + |
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Preference number: 6 (lower is better) Translates to: AEIGRPERGSYQ*CGHGTLSHGAW Trigger: CCAGGCCCCGTGGGAGAGGGTCCCATGCCCACAGCACTGGTAGGAGCCCCGCTCCGGCCTCCCTATCTCTGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000342380.3 |
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| CDS CCA 72 bp | CTGCAGGAACGGGCTGGCCTCCCGCACTGGAACCACTaGGGTCGGGGCTCCTGGATTCCGCCGACAGTGCCT | + |
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Preference number: 6 (lower is better) Translates to: LQERAGLPHWNH*GRGSWIPPTVP Trigger: AGGCACTGTCGGCGGAATCCAGGAGCCCCGACCCCAGTGGTTCCAGTGCGGGAGGCCAGCCCGTTCCTGCAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000342380.3 |
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| CDS CCA 72 bp | CCATCGCTGGCCGATGTGGACACTGGGGGCCCAAAGTaGTGTGATGGTGGGCAGCCCACGCCGGCTGAAGGC | + |
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Preference number: 6 (lower is better) Translates to: PSLADVDTGGPK*CDGGQPTPAEG Trigger: GCCTTCAGCCGGCGTGGGCTGCCCACCATCACACCACTTTGGGCCCCCAGTGTCCACATCGGCCAGCGATGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000342380.3 |
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| CDS TCA 72 bp | GGCTTGGTGGACACTCCGGCCAGCCAGGACTGCTCCTaGGCAACACCGGGGGCACCTGCTCCAGGCCTTGAT | + |
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Preference number: 6 (lower is better) Translates to: GLVDTPASQDCS*ATPGAPAPGLD Trigger: ATCAAGGCCTGGAGCAGGTGCCCCCGGTGTTGCTCAGGAGCAGTCCTGGCTGGCCGGAGTGTCCACCAAGCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000342380.3 |
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| CDS GCA 72 bp | CCCTTCTGGAGACACGTGGGCGCCAGGGAGACCACCTaGATCCCTCCACTGCGCCCCACACTCGAGAAGCAC | + |
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Preference number: 6 (lower is better) Translates to: PFWRHVGARETT*IPPLRPTLEKH Trigger: GTGCTTCTCGAGTGTGGGGCGCAGTGGAGGGATGCAGGTGGTCTCCCTGGCGCCCACGTGTCTCCAGAAGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000342380.3 |
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| CDS CAA 90 bp | GCCAGGACTGCTCCTGAGCAACACCGGGGGCACCTGCTCCAGGCCTaGATCTTGGGGAGGAAGCTAGGGTCTGAGGCTGCCTTGCCGAGG | + |
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Preference number: 6 (lower is better) Translates to: ARTAPEQHRGHLLQA*ILGRKLGSEAALPR Trigger: CCTCGGCAAGGCAGCCTCAGACCCTAGCTTCCTCCCCAAGATCAAGGCCTGGAGCAGGTGCCCCCGGTGTTGCTCAGGAGCAGTCCTGGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000342380.3 |
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| CDS GCA 72 bp | CTCCTGGATTCCGCCGACAGTGCCTCCAAAAGCCGCTaGAGAGATAGGGAGGCCGGAGCGGGGCTCCTACCA | + |
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Preference number: 6 (lower is better) Translates to: LLDSADSASKSR*RDREAGAGLLP Trigger: TGGTAGGAGCCCCGCTCCGGCCTCCCTATCTCTGCAGCGGCTTTTGGAGGCACTGTCGGCGGAATCCAGGAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000342380.3 |
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| CDS GCA 72 bp | GCAGGGAGGGAGCGCGCCATGCTCACTCACCGTACTTaGTGGAGAGCAGGAAGGGGACCTCCACGACACCAC | + |
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Preference number: 6 (lower is better) Translates to: AGRERAMLTHRT*WRAGRGPPRHH Trigger: GTGGTGTCGTGGAGGTCCCCTTCCTGCTCTCCAGCAAGTACGGTGAGTGAGCATGGCGCGCTCCCTCCCTGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000470582.1 |
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| CDS CAA 72 bp | GCTCCTGAGCAACACCGGGGGCACCTGCTCCAGGCCTaGATCTTGGGGAGGAAGCTAGGGTCTGAGGCTGCC | + |
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Preference number: 6 (lower is better) Translates to: APEQHRGHLLQA*ILGRKLGSEAA Trigger: GGCAGCCTCAGACCCTAGCTTCCTCCCCAAGATCAAGGCCTGGAGCAGGTGCCCCCGGTGTTGCTCAGGAGC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000342380.3 |
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| CDS CAA 72 bp | GGCAGGGAGGGAGCGCGCCATGCTCACTCACCGTACTaGCTGGAGAGCAGGAAGGGGACCTCCACGACACCA | + |
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Preference number: 6 (lower is better) Translates to: GREGARHAHSPY*LESRKGTSTTP Trigger: TGGTGTCGTGGAGGTCCCCTTCCTGCTCTCCAGCAAGTACGGTGAGTGAGCATGGCGCGCTCCCTCCCTGCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000470582.1 |
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| CDS CCA 72 bp | ACCCGGGTGATGTCCGAGGCACTCAGGTTCCATCGCTaGCCGATGTGGACACTGGGGGCCCAAAGTGGTGTG | + |
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Preference number: 6 (lower is better) Translates to: TRVMSEALRFHR*PMWTLGAQSGV Trigger: CACACCACTTTGGGCCCCCAGTGTCCACATCGGCCAGCGATGGAACCTGAGTGCCTCGGACATCACCCGGGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000342380.3 |
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| CDS CCA 72 bp | GGGAGGGAGCGCGCCATGCTCACTCACCGTACTTGCTaGAGAGCAGGAAGGGGACCTCCACGACACCACTAC | + |
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Preference number: 6 (lower is better) Translates to: GRERAMLTHRTC*RAGRGPPRHHY Trigger: GTAGTGGTGTCGTGGAGGTCCCCTTCCTGCTCTCCAGCAAGTACGGTGAGTGAGCATGGCGCGCTCCCTCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000470582.1 |
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| CDS TCA 72 bp | CCCGCGTGTGCTCGTGCCAGAAGCCCAGCACATGCATaGGCTCATGAAGGACAATGCCCCGGCCCTTCTGGA | + |
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Preference number: 6 (lower is better) Translates to: PACARARSPAHA*AHEGQCPGPSG Trigger: TCCAGAAGGGCCGGGGCATTGTCCTTCATGAGCTCATGCATGTGCTGGGCTTCTGGCACGAGCACACGCGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000342380.3 |
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| CDS CCA 72 bp | ATGTCCGAGGCACTCAGGTTCCATCGCTGGCCGATGTaGACACTGGGGGCCCAAAGTGGTGTGATGGTGGGC | + |
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Preference number: 6 (lower is better) Translates to: MSEALRFHRWPM*TLGAQSGVMVG Trigger: GCCCACCATCACACCACTTTGGGCCCCCAGTGTCCACATCGGCCAGCGATGGAACCTGAGTGCCTCGGACAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000342380.3 |
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| CDS CCA 72 bp | AGAACATTCCCCCACACTTGGGCATGTTGGGTGGGATaGGAGGCTGTTCCCAGGGTCCCAGCCACAGGGCTG | + |
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Preference number: 6 (lower is better) Translates to: RTFPHTWACWVG*EAVPRVPATGL Trigger: CAGCCCTGTGGCTGGGACCCTGGGAACAGCCTCCCATCCCACCCAACATGCCCAAGTGTGGGGGAATGTTCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000342380.3 |
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| CDS CAA 90 bp | AGCAGGAAGGGGACCTCCACGACACCACTACCACCCATGGGCCATTaGTTGCTGGTTGCTGACAGCAGTCGGAAGGGACTCGGCCGGATG | + |
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Preference number: 6 (lower is better) Translates to: SRKGTSTTPLPPMGH*LLVADSSRKGLGRM Trigger: CATCCGGCCGAGTCCCTTCCGACTGCTGTCAGCAACCAGCAACAAATGGCCCATGGGTGGTAGTGGTGTCGTGGAGGTCCCCTTCCTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000342380.3 ENST00000470582.1 |
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| CDS GCA 72 bp | CCTCCACGACACCACTACCACCCATGGGCCATTTGTTaGTGGTTGCTGACAGCAGTCGGAAGGGACTCGGCC | + |
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Preference number: 6 (lower is better) Translates to: PPRHHYHPWAIC*WLLTAVGRDSA Trigger: GGCCGAGTCCCTTCCGACTGCTGTCAGCAACCAGCAACAAATGGCCCATGGGTGGTAGTGGTGTCGTGGAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000342380.3 ENST00000470582.1 |
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| CDS CCA 72 bp | CCACGACACCACTACCACCCATGGGCCATTTGTTGCTaGTTGCTGACAGCAGTCGGAAGGGACTCGGCCGGA | + |
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Preference number: 6 (lower is better) Translates to: PRHHYHPWAICC*LLTAVGRDSAG Trigger: TCCGGCCGAGTCCCTTCCGACTGCTGTCAGCAACCAGCAACAAATGGCCCATGGGTGGTAGTGGTGTCGTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000342380.3 ENST00000470582.1 |
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| CDS CCA 72 bp | GGACTGGCTGGATTCCTGCTTCTGAAGATGGGACTGTaGGCTTGGTGGACACTCCGGCCAGCCAGGACTGCT | + |
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Preference number: 6 (lower is better) Translates to: GLAGFLLLKMGL*AWWTLRPARTA Trigger: AGCAGTCCTGGCTGGCCGGAGTGTCCACCAAGCCCACAGTCCCATCTTCAGAAGCAGGAATCCAGCCAGTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000342380.3 |
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| CDS CCA 72 bp | CCCTGGATGCTTTCTTCATGCCTGGGACAAACCTCATaGGGAAAGCCGGAGCTGGGGCAGAGGAGTAGGGCC | + |
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Preference number: 6 (lower is better) Translates to: PWMLSSCLGQTS*GKPELGQRSRA Trigger: GGCCCTACTCCTCTGCCCCAGCTCCGGCTTTCCCCATGAGGTTTGTCCCAGGCATGAAGAAAGCATCCAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000342380.3 |
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| CDS CAA 90 bp | AGGAAGGGGACCTCCACGACACCACTACCACCCATGGGCCATTTGTaGCTGGTTGCTGACAGCAGTCGGAAGGGACTCGGCCGGATGATG | + |
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Preference number: 6 (lower is better) Translates to: RKGTSTTPLPPMGHL*LVADSSRKGLGRMM Trigger: CATCATCCGGCCGAGTCCCTTCCGACTGCTGTCAGCAACCAGCAACAAATGGCCCATGGGTGGTAGTGGTGTCGTGGAGGTCCCCTTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000342380.3 ENST00000470582.1 |
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| CDS TCA 72 bp | TGCTCGTGCCAGAAGCCCAGCACATGCATGAGCTCATaGAGGACAATGCCCCGGCCCTTCTGGAGACACGTG | + |
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Preference number: 6 (lower is better) Translates to: CSCQKPSTCMSS*RTMPRPFWRHV Trigger: CACGTGTCTCCAGAAGGGCCGGGGCATTGTCCTTCATGAGCTCATGCATGTGCTGGGCTTCTGGCACGAGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000342380.3 |
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| CDS GCA 72 bp | CAAGAGGTAGACGACCCAGCTCCACTGGGCAGAGGATaGCCTCCCTACTTGGGGACAGAAGCCACAGGCTTA | + |
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Preference number: 6 (lower is better) Translates to: QEVDDPAPLGRG*PPYLGTEATGL Trigger: TAAGCCTGTGGCTTCTGTCCCCAAGTAGGGAGGGCATCCTCTGCCCAGTGGAGCTGGGTCGTCTACCTCTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000342380.3 |
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| CDS CCA 72 bp | TGGTTAATTGCAGGAATGTCCTTGTCCCCGGAGGCCTaGGTTCCCTCAGGGGTGAGGCCATCTGGGAAGCTG | + |
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Preference number: 6 (lower is better) Translates to: WLIAGMSLSPEA*VPSGVRPSGKL Trigger: CAGCTTCCCAGATGGCCTCACCCCTGAGGGAACCCAGGCCTCCGGGGACAAGGACATTCCTGCAATTAACCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000342380.3 ENST00000470582.1 |
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| CDS CCA 72 bp | GCAGGAAGGGGACCTCCACGACACCACTACCACCCATaGGCCATTTGTTGCTGGTTGCTGACAGCAGTCGGA | + |
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Preference number: 6 (lower is better) Translates to: AGRGPPRHHYHP*AICCWLLTAVG Trigger: TCCGACTGCTGTCAGCAACCAGCAACAAATGGCCCATGGGTGGTAGTGGTGTCGTGGAGGTCCCCTTCCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000342380.3 ENST00000470582.1 |
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| CDS CCA 72 bp | TGGGGACTGAGGGGCCTCTGGCCTAGGCCCACTCATTaGCACCCTGGATGCTTTCTTCATGCCTGGGACAAA | + |
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Preference number: 6 (lower is better) Translates to: WGLRGLWPRPTH*HPGCFLHAWDK Trigger: TTTGTCCCAGGCATGAAGAAAGCATCCAGGGTGCCAATGAGTGGGCCTAGGCCAGAGGCCCCTCAGTCCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000342380.3 |
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| CDS CAA 72 bp | ACCTCCACGACACCACTACCACCCATGGGCCATTTGTaGCTGGTTGCTGACAGCAGTCGGAAGGGACTCGGC | + |
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Preference number: 6 (lower is better) Translates to: TSTTPLPPMGHL*LVADSSRKGLG Trigger: GCCGAGTCCCTTCCGACTGCTGTCAGCAACCAGCAACAAATGGCCCATGGGTGGTAGTGGTGTCGTGGAGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000342380.3 ENST00000470582.1 |
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| CDS TCA 72 bp | ACCACTACCACCCATGGGCCATTTGTTGCTGGTTGCTaGCAGCAGTCGGAAGGGACTCGGCCGGATGATGTC | + |
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Preference number: 6 (lower is better) Translates to: TTTTHGPFVAGC*QQSEGTRPDDV Trigger: GACATCATCCGGCCGAGTCCCTTCCGACTGCTGTCAGCAACCAGCAACAAATGGCCCATGGGTGGTAGTGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000342380.3 ENST00000470582.1 |
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| CDS GCA 72 bp | GGCCTCTGGCCTAGGCCCACTCATTGGCACCCTGGATaGTTTCTTCATGCCTGGGACAAACCTCATGGGGAA | + |
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Preference number: 6 (lower is better) Translates to: GLWPRPTHWHPG*FLHAWDKPHGE Trigger: TTCCCCATGAGGTTTGTCCCAGGCATGAAGAAAGCATCCAGGGTGCCAATGAGTGGGCCTAGGCCAGAGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000342380.3 |
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| CDS GCA 72 bp | TCAAAGCCTCCTGGAGAGAAGGGCTGGAGGCTACACTaGTGTAGAACATTCCCCCACACTTGGGCATGTTGG | + |
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Preference number: 6 (lower is better) Translates to: SKPPGEKGWRLH*CRTFPHTWACW Trigger: CCAACATGCCCAAGTGTGGGGGAATGTTCTACAGCAGTGTAGCCTCCAGCCCTTCTCTCCAGGAGGCTTTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000342380.3 |
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