Pregenerated sensors for ASS1 (Homo sapiens)
Ensembl gene IDs: ENSG00000130707Ensembl transcript IDs: ENST00000372394.5, ENST00000422569.5, ENST00000467695.5, ENST00000493984.6
Found 11 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | AGAGGTCAGTGGCAGGCTCAAGGTCACAGAGGGCACAAGAATCTGTaGTTCCCCAGCACGCAGTGCCGCCGCCCACCGGGCTCGGGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: RGQWQAQGHRGHKNL*FPSTQCRRPPGSGS Trigger: GCTGCCCGAGCCCGGTGGGCGGCGGCACTGCGTGCTGGGGAAGCACAGATTCTTGTGCCCTCTGTGACCTTGAGCCTGCCACTGACCTCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372394.5 |
||
| CDS GCA 90 bp | TCTGAGCCTCTGGCAGCTGACACATCCCCCATCAGAACTGCTCCTTaGCAAGCACCAGGCAGGGCCCTGGGAGCCTCAGCGGGATCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: SEPLAADTSPIRTAP*QAPGRALGASAGSP Trigger: GGGAGATCCCGCTGAGGCTCCCAGGGCCCTGCCTGGTGCTTGGCAAGGAGCAGTTCTGATGGGGGATGTGTCAGCTGCCAGAGGCTCAGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000372394.5 |
||
| CDS TCA 90 bp | CTGACTGCAGTCCTAGGCTGGTCGGGGAGAGGCATCTCTTGGACCTaGTCCTCCAGCATCGAGGGAAGGCGGCTGAGGCTGAGCAGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: LTAVLGWSGRGISWT*SSSIEGRRLRLSSL Trigger: CAAACTGCTCAGCCTCAGCCGCCTTCCCTCGATGCTGGAGGATCAGGTCCAAGAGATGCCTCTCCCCGACCAGCCTAGGACTGCAGTCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372394.5 |
||
| CDS CCA 72 bp | GGTCAGAGCCGGGAGGGCCGAGCTGTGGGCTTCCCCTaGCCTGTAAGCTGCAGAGCTGGCCTCTCCTGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: GQSREGRAVGFP*PVSCRAGLSWE Trigger: CTCCCAGGAGAGGCCAGCTCTGCAGCTTACAGGCCAGGGGAAGCCCACAGCTCGGCCCTCCCGGCTCTGACC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000493984.6 |
||
| CDS GCA 72 bp | TGGCAGGCTCAAGGTCACAGAGGGCACAAGAATCTGTaGTTCCCCAGCACGCAGTGCCGCCGCCCACCGGGC | + |
|
Preference number: 6 (lower is better) Translates to: WQAQGHRGHKNL*FPSTQCRRPPG Trigger: GCCCGGTGGGCGGCGGCACTGCGTGCTGGGGAAGCACAGATTCTTGTGCCCTCTGTGACCTTGAGCCTGCCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372394.5 |
||
| CDS TCA 72 bp | GCTGGACATAGCGTCTGGAATCCGGTGCCAGGCGTTTaGGCATCGGGAGCCCCTTCCCTCCTGCCTCGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: AGHSVWNPVPGV*ASGAPSLLPRS Trigger: GGACCGAGGCAGGAGGGAAGGGGCTCCCGATGCTCAAACGCCTGGCACCGGATTCCAGACGCTATGTCCAGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000422569.5 |
||
| CDS GCA 72 bp | CTGGCAGCTGACACATCCCCCATCAGAACTGCTCCTTaGCAAGCACCAGGCAGGGCCCTGGGAGCCTCAGCG | + |
|
Preference number: 6 (lower is better) Translates to: LAADTSPIRTAP*QAPGRALGASA Trigger: CGCTGAGGCTCCCAGGGCCCTGCCTGGTGCTTGGCAAGGAGCAGTTCTGATGGGGGATGTGTCAGCTGCCAG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000372394.5 |
||
| CDS GCA 72 bp | TCAGCCACAACCATTAGCTGCAACGGTCCAGGCTCGTaGTCGCCCGAGACGGCGGTTCCCAAGAGGCCGGAC | + |
|
Preference number: 6 (lower is better) Translates to: SATTISCNGPGS*SPETAVPKRPD Trigger: GTCCGGCCTCTTGGGAACCGCCGTCTCGGGCGAGCACGAGCCTGGACCGTTGCAGCTAATGGTTGTGGCTGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000467695.5 |
||
| CDS CAA 90 bp | GGGAATGCTGACTGCAGTCCTAGGCTGGTCGGGGAGAGGCATCTCTaGGACCTGATCCTCCAGCATCGAGGGAAGGCGGCTGAGGCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: GNADCSPRLVGERHL*DLILQHRGKAAEAE Trigger: CTCAGCCTCAGCCGCCTTCCCTCGATGCTGGAGGATCAGGTCCAAGAGATGCCTCTCCCCGACCAGCCTAGGACTGCAGTCAGCATTCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372394.5 |
||
| CDS GCA 72 bp | GCCCGAGACGGCGGTTCCCAAGAGGCCGGACAGGGCTaGAGACACTCACGCGACTTCGTTCAGGTACATGAA | + |
|
Preference number: 6 (lower is better) Translates to: ARDGGSQEAGQG*RHSRDFVQVHE Trigger: TTCATGTACCTGAACGAAGTCGCGTGAGTGTCTGCAGCCCTGTCCGGCCTCTTGGGAACCGCCGTCTCGGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000467695.5 |
||
| CDS CAA 72 bp | GACTGCAGTCCTAGGCTGGTCGGGGAGAGGCATCTCTaGGACCTGATCCTCCAGCATCGAGGGAAGGCGGCT | + |
|
Preference number: 6 (lower is better) Translates to: DCSPRLVGERHL*DLILQHRGKAA Trigger: AGCCGCCTTCCCTCGATGCTGGAGGATCAGGTCCAAGAGATGCCTCTCCCCGACCAGCCTAGGACTGCAGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372394.5 |
||