RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ASRGL1 (Homo sapiens)

Ensembl gene IDs: ENSG00000162174

Ensembl transcript IDs: ENST00000301776.9, ENST00000415229.6, ENST00000525496.1, ENST00000525708.1, ENST00000526096.2, ENST00000528206.1, ENST00000529226.3, ENST00000534183.5, ENST00000534571.5, ENST00000628829.2

Found 337 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CGTTCTGAGGGTCACCTGGGCTTCGCCCACCACTGCTTCTACTGCTaGTGTGTCACTTTCAAACAGCTCCACCTCCACCGGCCCCTCCCT +
Preference number: 1 (lower is better)
Translates to: RSEGHLGFAHHCFYC*CVTFKQLHLHRPLP
Trigger: AGGGAGGGGCCGGTGGAGGTGGAGCTGTTTGAAAGTGACACAGCAGCAGTAGAAGCAGTGGTGGGCGAAGCCCAGGTGACCCTCAGAACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
3UTR TCA 90 bp TTCTTCACCATGCTGACCACACTGCACAGCGCCCGATCCGGCTGGTaGGGATGGGGAGGTGGGAAGAATCTCAAAGCACTGGACAGGGTG +
Preference number: 1 (lower is better)
Translates to: FFTMLTTLHSARSGW*GWGGGKNLKALDRV
Trigger: CACCCTGTCCAGTGCTTTGAGATTCTTCCCACCTCCCCATCCTCACCAGCCGGATCGGGCGCTGTGCAGTGTGGTCAGCATGGTGAAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
3UTR TCA 90 bp GGTCAGCCCTACAGCATCAGCTCCTCTCTGTTGTTGGAGAGGCCCTaGGCCCCATTACTCACTATACGAGGACCAGAGTGTCTTTGGCAG +
Preference number: 1 (lower is better)
Translates to: GQPYSISSSLLLERP*APLLTIRGPECLWQ
Trigger: CTGCCAAAGACACTCTGGTCCTCGTATAGTGAGTAATGGGGCTCAGGGCCTCTCCAACAACAGAGAGGAGCTGATGCTGTAGGGCTGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
3UTR GCA 90 bp CCCAACGCGGCCGACCATTTTATTAACGATACCGCCTGTGGAGGTTaGGTAGGCTACATTCCCTTTGCAGTCCAAGGCAACAGCACCCAC +
Preference number: 1 (lower is better)
Translates to: PNAADHFINDTACGG*VGYIPFAVQGNSTH
Trigger: GTGGGTGCTGTTGCCTTGGACTGCAAAGGGAATGTAGCCTACGCAACCTCCACAGGCGGTATCGTTAATAAAATGGTCGGCCGCGTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534183.5
ENST00000628829.2
3UTR CCA 90 bp TGGTTCTTTTCCCTGATGTTCTTGTGCAACGTTCTGAGGGTCACCTaGGCTTCGCCCACCACTGCTTCTACTGCTGCTGTGTCACTTTCA +
Preference number: 1 (lower is better)
Translates to: WFFSLMFLCNVLRVT*ASPTTASTAAVSLS
Trigger: TGAAAGTGACACAGCAGCAGTAGAAGCAGTGGTGGGCGAAGCCCAGGTGACCCTCAGAACGTTGCACAAGAACATCAGGGAAAAGAACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
3UTR GCA 90 bp TTCTCTAATTTCAAGTACCCAGGGACACAATACACTGCGGAAGGCTaGAGGGACCTCTGCCTAGGAAAGCCAGGTATTGTCCAAGGTTTC +
Preference number: 1 (lower is better)
Translates to: FSNFKYPGTQYTAEG*RDLCLGKPGIVQGF
Trigger: GAAACCTTGGACAATACCTGGCTTTCCTAGGCAGAGGTCCCTGCAGCCTTCCGCAGTGTATTGTGTCCCTGGGTACTTGAAATTAGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528206.1
3UTR GCA 90 bp GGAAGGCCTCTTTGCAGTTGTGATAAGAGGAAGGCATCTGTCTCCTaGTTGTCCCTGGGCAATAGAATGTCTGGGTTTAAAACCCGATTG +
Preference number: 1 (lower is better)
Translates to: GRPLCSCDKRKASVS*LSLGNRMSGFKTRL
Trigger: CAATCGGGTTTTAAACCCAGACATTCTATTGCCCAGGGACAAGCAGGAGACAGATGCCTTCCTCTTATCACAACTGCAAAGAGGCCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528206.1
3UTR GCA 90 bp AAAGGGTCTGTGCTGAGGAGCATTAGTAAAAGAGGAAGGCCTCTTTaGAGTTGTGATAAGAGGAAGGCATCTGTCTCCTGCTTGTCCCTG +
Preference number: 1 (lower is better)
Translates to: KGSVLRSISKRGRPL*SCDKRKASVSCLSL
Trigger: CAGGGACAAGCAGGAGACAGATGCCTTCCTCTTATCACAACTGCAAAGAGGCCTTCCTCTTTTACTAATGCTCCTCAGCACAGACCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528206.1
3UTR CCA 90 bp TTTGCAGTTGTGATAAGAGGAAGGCATCTGTCTCCTGCTTGTCCCTaGGCAATAGAATGTCTGGGTTTAAAACCCGATTGTATGTTCTAT +
Preference number: 1 (lower is better)
Translates to: FAVVIRGRHLSPACP*AIECLGLKPDCMFY
Trigger: ATAGAACATACAATCGGGTTTTAAACCCAGACATTCTATTGCCCAGGGACAAGCAGGAGACAGATGCCTTCCTCTTATCACAACTGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528206.1
3UTR CCA 90 bp CACTTTAGTCTCTCATACATGAAGAACATTTTCCTTAAAGGATTCTaGTTCTTTTCCCTGATGTTCTTGTGCAACGTTCTGAGGGTCACC +
Preference number: 1 (lower is better)
Translates to: HFSLSYMKNIFLKGF*FFSLMFLCNVLRVT
Trigger: GGTGACCCTCAGAACGTTGCACAAGAACATCAGGGAAAAGAACCAGAATCCTTTAAGGAAAATGTTCTTCATGTATGAGAGACTAAAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
3UTR-3UTR TCA 90 bp CCTTGGCGGCTGCCCAGGGCATGGAGGTGGAGGTCCACTTTGCCACCCAGTCTCCCCATGCCCTGTGGTTaGGACGGCTCCGATGTCATT +
Preference number: 2 (lower is better)
Translates to: PWRLPRAWRWRSTLPPSLPMPCG*DGSDVI
Trigger: AATGACATCGGAGCCGTCTCAACCACAGGGCATGGG...GAGACTGGGTGGCAAAGTGGACCTCCACCTCCATGCCCTGGGCAGCCGCCAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628829.2
3UTR CAA 90 bp GAGGCCCTGAGCCCCATTACTCACTATACGAGGACCAGAGTGTCTTaGGCAGGTGGAGGCTGGCTCACGGGAGAACACCAAGTGAGGGGG +
Preference number: 2 (lower is better)
Translates to: EALSPITHYTRTRVS*AGGGWLTGEHQVRG
Trigger: CCCCCTCACTTGGTGTTCTCCCGTGAGCCAGCCTCCACCTGCCAAAGACACTCTGGTCCTCGTATAGTGAGTAATGGGGCTCAGGGCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
3UTR-3UTR GCA 90 bp TCCTTGGCGGCTGCCCAGGGCATGGAGGTGGAGGTCCACTTTGCCACCCAGTCTACCGCCTGTGGAGGTTaGGTAGGCTACATTCCCTTT +
Preference number: 2 (lower is better)
Translates to: SLAAAQGMEVEVHFATQSTACGG*VGYIPF
Trigger: AAAGGGAATGTAGCCTACGCAACCTCCACAGGCGGT...AGACTGGGTGGCAAAGTGGACCTCCACCTCCATGCCCTGGGCAGCCGCCAAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628829.2
3UTR CAA 90 bp AGGTCGGTGATAGTAGTATCGTCAGGATCAATTCCGAAGTGCAGCTaGCCGTCCTTGGCGGCTGCCCAGGGCATGGAGGTGGAGGTCCAC +
Preference number: 2 (lower is better)
Translates to: RSVIVVSSGSIPKCS*PSLAAAQGMEVEVH
Trigger: GTGGACCTCCACCTCCATGCCCTGGGCAGCCGCCAAGGACGGCAAGCTGCACTTCGGAATTGATCCTGACGATACTACTATCACCGACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628829.2
3UTR CAA 90 bp ATAGTAGTATCGTCAGGATCAATTCCGAAGTGCAGCTTGCCGTCCTaGGCGGCTGCCCAGGGCATGGAGGTGGAGGTCCACTTTGCCACC +
Preference number: 2 (lower is better)
Translates to: IVVSSGSIPKCSLPS*AAAQGMEVEVHFAT
Trigger: GGTGGCAAAGTGGACCTCCACCTCCATGCCCTGGGCAGCCGCCAAGGACGGCAAGCTGCACTTCGGAATTGATCCTGACGATACTACTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628829.2
3UTR-3UTR GCA 90 bp TCAGCTCCTCTCTGTTGTTGGAGAGGCCCTGAGCCCCATTACTCACTATACGAGCCAGCCCACAGTGTCTaGAGGCTGTGGGTCTCCCAC +
Preference number: 2 (lower is better)
Translates to: SAPLCCWRGPEPHYSLYEPAHSV*RLWVSH
Trigger: GTGGGAGACCCACAGCCTGCAGACACTGTGGGCTGG...CTCGTATAGTGAGTAATGGGGCTCAGGGCCTCTCCAACAACAGAGAGGAGCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
3UTR-3UTR GCA 90 bp AACGATACCGCCTGTGGAGGTTGCGTAGGCTACATTCCCTTTGCAGTCCAAGGCTGGAACCCCCATAGCTaGTGCAAACTGCGCTGCGCC +
Preference number: 2 (lower is better)
Translates to: NDTACGGCVGYIPFAVQGWNPHS*CKLRCA
Trigger: GGCGCAGCGCAGTTTGCAGCAGCTATGGGGGTTCCA...GCCTTGGACTGCAAAGGGAATGTAGCCTACGCAACCTCCACAGGCGGTATCGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000534183.5
ENST00000628829.2
3UTR-3UTR CCA 90 bp CAGAGTGTCTTTGGCAGGTGGAGGCTGGCTCACGGGAGAACACCAAGTGAGGGGAGTGTCTGCAGGCTGTaGGTCTCCCACATCTGTCAT +
Preference number: 2 (lower is better)
Translates to: QSVFGRWRLAHGRTPSEGSVCRL*VSHICH
Trigger: ATGACAGATGTGGGAGACCCACAGCCTGCAGACACT...CCCCTCACTTGGTGTTCTCCCGTGAGCCAGCCTCCACCTGCCAAAGACACTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
3UTR-3UTR CCA 90 bp CCTTGGCGGCTGCCCAGGGCATGGAGGTGGAGGTCCACTTTGCCACCCAGTCTCTTTCCTTGTTCTATGTaGAACAGGGTGAGTCTAGCC +
Preference number: 2 (lower is better)
Translates to: PWRLPRAWRWRSTLPPSLFPCSM*NRVSLA
Trigger: GGCTAGACTCACCCTGTTCCACATAGAACAAGGAAA...GAGACTGGGTGGCAAAGTGGACCTCCACCTCCATGCCCTGGGCAGCCGCCAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628829.2
3UTR-3UTR GCA 90 bp CAGAGTGTCTTTGGCAGGTGGAGGCTGGCTCACGGGAGAACACCAAGTGAGGGGTCCCTGATGTTCTTGTaGAACGTTCTGAGGGTCACC +
Preference number: 2 (lower is better)
Translates to: QSVFGRWRLAHGRTPSEGSLMFL*NVLRVT
Trigger: GGTGACCCTCAGAACGTTGCACAAGAACATCAGGGA...CCCCTCACTTGGTGTTCTCCCGTGAGCCAGCCTCCACCTGCCAAAGACACTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
3UTR-3UTR CCA 90 bp AGGTCGGTGATAGTAGTATCGTCAGGATCAATTCCGAAGTGCAGCTTGCCGTCCCCCAGGGCATGGAGGTaGAGGTCCACTTTGCCACCC +
Preference number: 2 (lower is better)
Translates to: RSVIVVSSGSIPKCSLPSPRAWR*RSTLPP
Trigger: GGGTGGCAAAGTGGACCTCCACCTCCATGCCCTGGG...GGACGGCAAGCTGCACTTCGGAATTGATCCTGACGATACTACTATCACCGACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000628829.2
3UTR-3UTR GCA 90 bp CATTGTCACTCCCAGACATCCTGGAGCTGCACCAAAAGCAGAAAGGGAACGCAGAACCCCCATAGCTGCTaGAAACTGCGCTGCGCCTTG +
Preference number: 2 (lower is better)
Translates to: HCHSQTSWSCTKSRKGTQNPHSC*KLRCAL
Trigger: CAAGGCGCAGCGCAGTTTGCAGCAGCTATGGGGGTT...CTGCGTTCCCTTTCTGCTTTTGGTGCAGCTCCAGGATGTCTGGGAGTGACAATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534183.5
3UTR CAA 90 bp CAGGGCATGGAGGTGGAGGTCCACTTTGCCACCCAGTCTCCTGTTTaGCTAACCACGATGAGGCCACCTAAACCTTTAACCCTTGACTTC +
Preference number: 2 (lower is better)
Translates to: QGMEVEVHFATQSPV*LTTMRPPKPLTLDF
Trigger: GAAGTCAAGGGTTAAAGGTTTAGGTGGCCTCATCGTGGTTAGCAAAACAGGAGACTGGGTGGCAAAGTGGACCTCCACCTCCATGCCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628829.2
3UTR-3UTR TCA 90 bp ATGGAATGTCAAGTTAAGCAAATTCTTTCCAGAGAGAAGGTGAGCCTGACAGACGCCCGATCCGGCTGGTaGGGATGGGGAGGTGGGAAG +
Preference number: 2 (lower is better)
Translates to: MECQVKQILSREKVSLTDARSGW*GWGGGK
Trigger: CTTCCCACCTCCCCATCCTCACCAGCCGGATCGGGC...GTCTGTCAGGCTCACCTTCTCTCTGGAAAGAATTTGCTTAACTTGACATTCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
3UTR-3UTR GCA 90 bp GGGCATTTCTCTCATCGCTTCAGAACCCGCCCCACAACCAAACATTCAGATGCTAGGATGCTTTCCCCATaGCCTGTGGTTGAGACGGCT +
Preference number: 2 (lower is better)
Translates to: GHFSHRFRTRPTTKHSDARMLSP*PVVETA
Trigger: AGCCGTCTCAACCACAGGGCATGGGGAAAGCATCCT...AGCATCTGAATGTTTGGTTGTGGGGCGGGTTCTGAAGCGATGAGAGAAATGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628829.2
3UTR-3UTR CCA 90 bp GCTCAAGTAATCCTCCTAATACGGGCATTTCTCTCATCGCTTCAGAACCCGCCCTTTCCCCATGCCCTGTaGTTGAGACGGCTCCGATGT +
Preference number: 2 (lower is better)
Translates to: AQVILLIRAFLSSLQNPPFPHAL*LRRLRC
Trigger: ACATCGGAGCCGTCTCAACCACAGGGCATGGGGAAA...GGGCGGGTTCTGAAGCGATGAGAGAAATGCCCGTATTAGGAGGATTACTTGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628829.2
3UTR-3UTR TCA 90 bp AGGAATACTGCCCACCGAGGAAATGACTTTCTTCACCATGCTGACCACACTGCAGAGGGGGCTCCTCTGTaGACCCAAGAAACTTCAAGG +
Preference number: 2 (lower is better)
Translates to: RNTAHRGNDFLHHADHTAEGAPL*TQETSR
Trigger: CCTTGAAGTTTCTTGGGTTCACAGAGGAGCCCCCTC...TGCAGTGTGGTCAGCATGGTGAAGAAAGTCATTTCCTCGGTGGGCAGTATTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
3UTR-3UTR GCA 90 bp GGGCATTTCTCTCATCGCTTCAGAACCCGCCCCACAACCAAACATTCAGATGCTTCCCTGATGTTCTTGTaGAACGTTCTGAGGGTCACC +
Preference number: 2 (lower is better)
Translates to: GHFSHRFRTRPTTKHSDASLMFL*NVLRVT
Trigger: GGTGACCCTCAGAACGTTGCACAAGAACATCAGGGA...AGCATCTGAATGTTTGGTTGTGGGGCGGGTTCTGAAGCGATGAGAGAAATGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
3UTR-3UTR GCA 90 bp TGTTTTCCTGCTGACCCTCTCCTCTCTATTAACTTATTGTCCTGCCACATCCCCTGTCTCTGTCTCTCCTaGCTCAGCCTCCTGAGTAGC +
Preference number: 2 (lower is better)
Translates to: CFPADPLLSINLLSCHIPCLCLS*LSLLSS
Trigger: GCTACTCAGGAGGCTGAGGCAGGAGAGACAGAGACA...GGGGATGTGGCAGGACAATAAGTTAATAGAGAGGAGAGGGTCAGCAGGAAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528206.1
3UTR-3UTR TCA 90 bp GTTGTTGGAGAGGCCCTGAGCCCCATTACTCACTATACGAGGACCAGAGTGTCTTCTGGTTCTTTTCCCTaGTGTTCTTGTGCAACGTTC +
Preference number: 2 (lower is better)
Translates to: VVGEALSPITHYTRTRVSSGSFP*CSCATF
Trigger: GAACGTTGCACAAGAACATCAGGGAAAAGAACCAGA...AGACACTCTGGTCCTCGTATAGTGAGTAATGGGGCTCAGGGCCTCTCCAACAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
3UTR-3UTR GCA 90 bp GCAACGTTAGCATCCCTGTCTCCACTTCTCTCCCCAAGTTGTTCCAAAAAGGCAAGGCTACATTCCCTTTaGAGTCCAAGGCAACAGCAC +
Preference number: 2 (lower is better)
Translates to: ATLASLSPLLSPSCSKKARLHSL*SPRQQH
Trigger: GTGCTGTTGCCTTGGACTGCAAAGGGAATGTAGCCT...TGCCTTTTTGGAACAACTTGGGGAGAGAAGTGGAGACAGGGATGCTAACGTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534183.5
3UTR-3UTR CCA 90 bp CCTGTCTCCACTTCTCTCCCCAAGTTGTTCCAAAAAGGCATGCAATCTAGTAAAGCAGGAGGCATCCCTTaGTCCTACCTAGACACGGTG +
Preference number: 2 (lower is better)
Translates to: PVSTSLPKLFQKGMQSSKAGGIP*SYLDTV
Trigger: CACCGTGTCTAGGTAGGACCAAGGGATGCCTCCTGC...TTTACTAGATTGCATGCCTTTTTGGAACAACTTGGGGAGAGAAGTGGAGACAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534183.5
3UTR-3UTR TCA 90 bp GTTGTTGGAGAGGCCCTGAGCCCCATTACTCACTATACGAGGACCAGAGTGTCTAGGCAACAAAACAAGTaGCAGACGGGACAATTTTTC +
Preference number: 2 (lower is better)
Translates to: VVGEALSPITHYTRTRVSRQQNK*QTGQFF
Trigger: GAAAAATTGTCCCGTCTGTCACTTGTTTTGTTGCCT...AGACACTCTGGTCCTCGTATAGTGAGTAATGGGGCTCAGGGCCTCTCCAACAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
3UTR-3UTR CCA 90 bp CATTTCTCTCATCGCTTCAGAACCCGCCCCACAACCAAACATTCAGATGCTTATAGTGTCTGCAGGCTGTaGGTCTCCCACATCTGTCAT +
Preference number: 2 (lower is better)
Translates to: HFSHRFRTRPTTKHSDAYSVCRL*VSHICH
Trigger: ATGACAGATGTGGGAGACCCACAGCCTGCAGACACT...ATAAGCATCTGAATGTTTGGTTGTGGGGCGGGTTCTGAAGCGATGAGAGAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
3UTR CAA 90 bp CCTCCCATCTCCAGATTAGGAAGCTATGGATTCCCAGAGGGTCCTTaGGAAGTATCTAGAAATGTCCAGGTAAGTCAGAGAAGGGCTGAA +
Preference number: 2 (lower is better)
Translates to: PPISRLGSYGFPEGP*EVSRNVQVSQRRAE
Trigger: TTCAGCCCTTCTCTGACTTACCTGGACATTTCTAGATACTTCCAAAGGACCCTCTGGGAATCCATAGCTTCCTAATCTGGAGATGGGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
3UTR-3UTR TCA 90 bp GGGCATTTCTCTCATCGCTTCAGAACCCGCCCCACAACCAAACATTCAGATGCTAGGCAACAAAACAAGTaGCAGACGGGACAATTTTTC +
Preference number: 2 (lower is better)
Translates to: GHFSHRFRTRPTTKHSDARQQNK*QTGQFF
Trigger: GAAAAATTGTCCCGTCTGTCACTTGTTTTGTTGCCT...AGCATCTGAATGTTTGGTTGTGGGGCGGGTTCTGAAGCGATGAGAGAAATGCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301776.9
ENST00000415229.6
ENST00000628829.2
3UTR-3UTR GCA 90 bp CCTGTCTCCACTTCTCTCCCCAAGTTGTTCCAAAAAGGCATGCAATCTAGTAAAACCGCCTGTGGAGGTTaGGTAGGCTACATTCCCTTT +
Preference number: 2 (lower is better)
Translates to: PVSTSLPKLFQKGMQSSKTACGG*VGYIPF
Trigger: AAAGGGAATGTAGCCTACGCAACCTCCACAGGCGGT...TTTACTAGATTGCATGCCTTTTTGGAACAACTTGGGGAGAGAAGTGGAGACAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000534183.5
3UTR-3UTR CCA 90 bp AGGAATACTGCCCACCGAGGAAATGACTTTCTTCACCATGCTGACCACACTGCATCCCAGAGGGTCCTTTaGAAGTATCTAGAAATGTCC +
Preference number: 2 (lower is better)
Translates to: RNTAHRGNDFLHHADHTASQRVL*KYLEMS
Trigger: GGACATTTCTAGATACTTCCAAAGGACCCTCTGGGA...TGCAGTGTGGTCAGCATGGTGAAGAAAGTCATTTCCTCGGTGGGCAGTATTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
3UTR-3UTR CCA 90 bp CGAAAGAGATCAGGCTGTTACTGTGTCTATGTAGAAAGAAGTAGACATAAGAGAGGCCACCCCTTCATCTaGTGCCCAACGTGGGTGCTT +
Preference number: 2 (lower is better)
Translates to: RKRSGCYCVYVERSRHKRGHPFI*CPTWVL
Trigger: AAGCACCCACGTTGGGCACCAGATGAAGGGGTGGCC...TCTCTTATGTCTACTTCTTTCTACATAGACACAGTAACAGCCTGATCTCTTTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528206.1
3UTR CAA 90 bp AGGCCTCTTTGCAGTTGTGATAAGAGGAAGGCATCTGTCTCCTGCTaGTCCCTGGGCAATAGAATGTCTGGGTTTAAAACCCGATTGTAT +
Preference number: 2 (lower is better)
Translates to: RPLCSCDKRKASVSC*SLGNRMSGFKTRLY
Trigger: ATACAATCGGGTTTTAAACCCAGACATTCTATTGCCCAGGGACAAGCAGGAGACAGATGCCTTCCTCTTATCACAACTGCAAAGAGGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528206.1
3UTR-3UTR TCA 90 bp TACGGGCATTTCTCTCATCGCTTCAGAACCCGCCCCACAACCAAACATTCAGATAGGCAACAAAACAAGTaGCAGACGGGACAATTTTTC +
Preference number: 2 (lower is better)
Translates to: YGHFSHRFRTRPTTKHSDRQQNK*QTGQFF
Trigger: GAAAAATTGTCCCGTCTGTCACTTGTTTTGTTGCCT...ATCTGAATGTTTGGTTGTGGGGCGGGTTCTGAAGCGATGAGAGAAATGCCCGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301776.9
ENST00000415229.6
ENST00000628829.2
3UTR-3UTR TCA 90 bp ATGGAATGTCAAGTTAAGCAAATTCTTTCCAGAGAGAAGGTGAGCCTGACAGACTTGTTGGAGAGGCCCTaGGCCCCATTACTCACTATA +
Preference number: 2 (lower is better)
Translates to: MECQVKQILSREKVSLTDLLERP*APLLTI
Trigger: TATAGTGAGTAATGGGGCTCAGGGCCTCTCCAACAA...GTCTGTCAGGCTCACCTTCTCTCTGGAAAGAATTTGCTTAACTTGACATTCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
3UTR-3UTR GCA 90 bp AGGAATACTGCCCACCGAGGAAATGACTTTCTTCACCATGCTGACCACACTGCAGTCATGTCAGGATCATaGTGCTGCTTTCTTTCTTTT +
Preference number: 2 (lower is better)
Translates to: RNTAHRGNDFLHHADHTAVMSGS*CCFLSF
Trigger: AAAAGAAAGAAAGCAGCAGCATGATCCTGACATGAC...TGCAGTGTGGTCAGCATGGTGAAGAAAGTCATTTCCTCGGTGGGCAGTATTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
3UTR-3UTR GCA 90 bp TCAAATACTATATGGATTTGTGGGGAAACGAAAGAGATCAGGCTGTTACTGTGTAGGGACACAATACACTaGGGAAGGCTGCAGGGACCT +
Preference number: 2 (lower is better)
Translates to: SNTIWICGETKEIRLLLCRDTIH*GRLQGP
Trigger: AGGTCCCTGCAGCCTTCCGCAGTGTATTGTGTCCCT...ACACAGTAACAGCCTGATCTCTTTCGTTTCCCCACAAATCCATATAGTATTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528206.1
3UTR-3UTR CCA 90 bp CATTTCTCTCATCGCTTCAGAACCCGCCCCACAACCAAACATTCAGATGCTTATTCCCAGAGGGTCCTTTaGAAGTATCTAGAAATGTCC +
Preference number: 2 (lower is better)
Translates to: HFSHRFRTRPTTKHSDAYSQRVL*KYLEMS
Trigger: GGACATTTCTAGATACTTCCAAAGGACCCTCTGGGA...ATAAGCATCTGAATGTTTGGTTGTGGGGCGGGTTCTGAAGCGATGAGAGAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
3UTR CAA 90 bp TTCATGCTGCTCAGATCTAACAACTGCAGTCTCAGATTTCTCAGATaGCTAATCAGAGCCCATGTCTCGGGAGTAAGTCTTACTCAAGTA +
Preference number: 2 (lower is better)
Translates to: FMLLRSNNCSLRFLR*LIRAHVSGVSLTQV
Trigger: TACTTGAGTAAGACTTACTCCCGAGACATGGGCTCTGATTAGCAATCTGAGAAATCTGAGACTGCAGTTGTTAGATCTGAGCAGCATGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534183.5
3UTR CAA 90 bp TCCTGCTTGTCCCTGGGCAATAGAATGTCTGGGTTTAAAACCCGATaGTATGTTCTATTTACTGAGATAGGAGAAAACAGCCTTAGGGCT +
Preference number: 2 (lower is better)
Translates to: SCLSLGNRMSGFKTR*YVLFTEIGENSLRA
Trigger: AGCCCTAAGGCTGTTTTCTCCTATCTCAGTAAATAGAACATACAATCGGGTTTTAAACCCAGACATTCTATTGCCCAGGGACAAGCAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528206.1
3UTR-3UTR GCA 90 bp AATGAGATGGCGTGCTTCCCCGTTAATGTAAACAACATCTCAATCTATAATGTGCAGACATCCTGGAGCTaGACCAAAAGCAGAAAGGGA +
Preference number: 2 (lower is better)
Translates to: NEMACFPVNVNNISIYNVQTSWS*TKSRKG
Trigger: TCCCTTTCTGCTTTTGGTGCAGCTCCAGGATGTCTG...CACATTATAGATTGAGATGTTGTTTACATTAACGGGGAAGCACGCCATCTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534183.5
3UTR-3UTR GCA 90 bp TCAAATACTATATGGATTTGTGGGGAAACGAAAGAGATCAGGCTGTTACTGTGTAAGGCATCTGTCTCCTaGTTGTCCCTGGGCAATAGA +
Preference number: 2 (lower is better)
Translates to: SNTIWICGETKEIRLLLCKASVS*LSLGNR
Trigger: TCTATTGCCCAGGGACAAGCAGGAGACAGATGCCTT...ACACAGTAACAGCCTGATCTCTTTCGTTTCCCCACAAATCCATATAGTATTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528206.1
3UTR-3UTR GCA 90 bp CGAAAGAGATCAGGCTGTTACTGTGTCTATGTAGAAAGAAGTAGACATAAGAGAAGAGGAAGGCCTCTTTaGAGTTGTGATAAGAGGAAG +
Preference number: 2 (lower is better)
Translates to: RKRSGCYCVYVERSRHKRRGRPL*SCDKRK
Trigger: CTTCCTCTTATCACAACTGCAAAGAGGCCTTCCTCT...TCTCTTATGTCTACTTCTTTCTACATAGACACAGTAACAGCCTGATCTCTTTCG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528206.1
3UTR-3UTR CCA 90 bp ATGGAATGTCAAGTTAAGCAAATTCTTTCCAGAGAGAAGGTGAGCCTGACAGACTTCCTTAAAGGATTCTaGTTCTTTTCCCTGATGTTC +
Preference number: 2 (lower is better)
Translates to: MECQVKQILSREKVSLTDFLKGF*FFSLMF
Trigger: GAACATCAGGGAAAAGAACCAGAATCCTTTAAGGAA...GTCTGTCAGGCTCACCTTCTCTCTGGAAAGAATTTGCTTAACTTGACATTCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
3UTR-3UTR CCA 90 bp AATGAGATGGCGTGCTTCCCCGTTAATGTAAACAACATCTCAATCTATAATGTGCAGATCCTGAAACTGTaGCTAAAGAGAAGACAGAAT +
Preference number: 2 (lower is better)
Translates to: NEMACFPVNVNNISIYNVQILKL*LKRRQN
Trigger: ATTCTGTCTTCTCTTTAGCCACAGTTTCAGGATCTG...CACATTATAGATTGAGATGTTGTTTACATTAACGGGGAAGCACGCCATCTCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534183.5
3UTR-3UTR CAA 90 bp CGTCCTTGGCGGCTGCCCAGGGCATGGAGGTGGAGGTCCACTTTGCCACCCAGTCCCCATGCCCTGTGGTaGAGACGGCTCCGATGTCAT +
Preference number: 3 (lower is better)
Translates to: RPWRLPRAWRWRSTLPPSPHALW*RRLRCH
Trigger: ATGACATCGGAGCCGTCTCAACCACAGGGCATGGGG...ACTGGGTGGCAAAGTGGACCTCCACCTCCATGCCCTGGGCAGCCGCCAAGGACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628829.2
3UTR-3UTR CAA 90 bp CTTGCCGTCCTTGGCGGCTGCCCAGGGCATGGAGGTGGAGGTCCACTTTGCCACTGGCTCACCTCAGCTTaGACCTCCTGGGCTCAAGTA +
Preference number: 3 (lower is better)
Translates to: LAVLGGCPGHGGGGPLCHWLTSA*TSWAQV
Trigger: TACTTGAGCCCAGGAGGTCAAAGCTGAGGTGAGCCA...GTGGCAAAGTGGACCTCCACCTCCATGCCCTGGGCAGCCGCCAAGGACGGCAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628829.2
3UTR CCA 72 bp CGTCAGGATCAATTCCGAAGTGCAGCTTGCCGTCCTTaGCGGCTGCCCAGGGCATGGAGGTGGAGGTCCACT +
Preference number: 3 (lower is better)
Translates to: RQDQFRSAACRP*RLPRAWRWRST
Trigger: AGTGGACCTCCACCTCCATGCCCTGGGCAGCCGCCAAGGACGGCAAGCTGCACTTCGGAATTGATCCTGACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628829.2
3UTR GCA 72 bp GGCGGCTGCCCAGGGCATGGAGGTGGAGGTCCACTTTaGCACCCAGTCTCCTGTTTTGCTAACCACGATGAG +
Preference number: 3 (lower is better)
Translates to: GGCPGHGGGGPL*HPVSCFANHDE
Trigger: CTCATCGTGGTTAGCAAAACAGGAGACTGGGTGGCAAAGTGGACCTCCACCTCCATGCCCTGGGCAGCCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628829.2
3UTR GCA 72 bp GGTCACCTGGGCTTCGCCCACCACTGCTTCTACTGCTaGTGTGTCACTTTCAAACAGCTCCACCTCCACCGG +
Preference number: 3 (lower is better)
Translates to: GHLGFAHHCFYC*CVTFKQLHLHR
Trigger: CCGGTGGAGGTGGAGCTGTTTGAAAGTGACACAGCAGCAGTAGAAGCAGTGGTGGGCGAAGCCCAGGTGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
3UTR-3UTR CAA 90 bp TCCTTGGCGGCTGCCCAGGGCATGGAGGTGGAGGTCCACTTTGCCACCCAGTCTATGAGGAGACTGTACTaGACCTCTAAGCTAGCATCT +
Preference number: 3 (lower is better)
Translates to: SLAAAQGMEVEVHFATQSMRRLY*TSKLAS
Trigger: AGATGCTAGCTTAGAGGTCAAGTACAGTCTCCTCAT...AGACTGGGTGGCAAAGTGGACCTCCACCTCCATGCCCTGGGCAGCCGCCAAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628829.2
3UTR GCA 72 bp TACCGCCTGTGGAGGTTGCGTAGGCTACATTCCCTTTaGAGTCCAAGGCAACAGCACCCACGGTTCCCAAGT +
Preference number: 3 (lower is better)
Translates to: YRLWRLRRLHSL*SPRQQHPRFPS
Trigger: ACTTGGGAACCGTGGGTGCTGTTGCCTTGGACTGCAAAGGGAATGTAGCCTACGCAACCTCCACAGGCGGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534183.5
ENST00000628829.2
3UTR CCA 72 bp TCCCTGATGTTCTTGTGCAACGTTCTGAGGGTCACCTaGGCTTCGCCCACCACTGCTTCTACTGCTGCTGTG +
Preference number: 3 (lower is better)
Translates to: SLMFLCNVLRVT*ASPTTASTAAV
Trigger: CACAGCAGCAGTAGAAGCAGTGGTGGGCGAAGCCCAGGTGACCCTCAGAACGTTGCACAAGAACATCAGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
3UTR CCA 72 bp GCCCCATTACTCACTATACGAGGACCAGAGTGTCTTTaGCAGGTGGAGGCTGGCTCACGGGAGAACACCAAG +
Preference number: 3 (lower is better)
Translates to: APLLTIRGPECL*QVEAGSRENTK
Trigger: CTTGGTGTTCTCCCGTGAGCCAGCCTCCACCTGCCAAAGACACTCTGGTCCTCGTATAGTGAGTAATGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
3UTR-3UTR CAA 90 bp CCCAGCCCTGCCTCTCACCCACTCCTGGGAATGAGATGGCGTGCTTCCCCGTTACTCAGATTTCTCAGATaGCTAATCAGAGCCCATGTC +
Preference number: 3 (lower is better)
Translates to: PSPASHPLLGMRWRASPLLRFLR*LIRAHV
Trigger: GACATGGGCTCTGATTAGCAATCTGAGAAATCTGAG...TAACGGGGAAGCACGCCATCTCATTCCCAGGAGTGGGTGAGAGGCAGGGCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534183.5
3UTR TCA 72 bp GTTCACCTTCAGGATGCTTTCCCCATGCCCTGTGGTTaGGACGGCTCCGATGTCATTGTCGGCATAACCTCC +
Preference number: 3 (lower is better)
Translates to: VHLQDAFPMPCG*DGSDVIVGITS
Trigger: GGAGGTTATGCCGACAATGACATCGGAGCCGTCTCAACCACAGGGCATGGGGAAAGCATCCTGAAGGTGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628829.2
3UTR GCA 72 bp AGTCTAGCCAGGTTCACCTTCAGGATGCTTTCCCCATaGCCTGTGGTTGAGACGGCTCCGATGTCATTGTCG +
Preference number: 3 (lower is better)
Translates to: SLARFTFRMLSP*PVVETAPMSLS
Trigger: CGACAATGACATCGGAGCCGTCTCAACCACAGGGCATGGGGAAAGCATCCTGAAGGTGAACCTGGCTAGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628829.2
3UTR CCA 72 bp CCAGGTTCACCTTCAGGATGCTTTCCCCATGCCCTGTaGTTGAGACGGCTCCGATGTCATTGTCGGCATAAC +
Preference number: 3 (lower is better)
Translates to: PGSPSGCFPHAL*LRRLRCHCRHN
Trigger: GTTATGCCGACAATGACATCGGAGCCGTCTCAACCACAGGGCATGGGGAAAGCATCCTGAAGGTGAACCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628829.2
3UTR GCA 72 bp TTCAAGTACCCAGGGACACAATACACTGCGGAAGGCTaGAGGGACCTCTGCCTAGGAAAGCCAGGTATTGTC +
Preference number: 3 (lower is better)
Translates to: FKYPGTQYTAEG*RDLCLGKPGIV
Trigger: GACAATACCTGGCTTTCCTAGGCAGAGGTCCCTGCAGCCTTCCGCAGTGTATTGTGTCCCTGGGTACTTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528206.1
3UTR-3UTR CAA 90 bp GCTCAAGTAATCCTCCTAATACGGGCATTTCTCTCATCGCTTCAGAACCCGCCCAGGTGGAGGTCCACTTaGCCACCCAGTCTCCTGTTT +
Preference number: 3 (lower is better)
Translates to: AQVILLIRAFLSSLQNPPRWRST*PPSLLF
Trigger: AAACAGGAGACTGGGTGGCAAAGTGGACCTCCACCT...GGGCGGGTTCTGAAGCGATGAGAGAAATGCCCGTATTAGGAGGATTACTTGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628829.2
3UTR-3UTR CAA 90 bp TACTTGACCTCTAAGCTAGCATCTGGAATACAATCTTCCAGCGGCTTAGGGAAGATTCCGAAGTGCAGCTaGCCGTCCTTGGCGGCTGCC +
Preference number: 3 (lower is better)
Translates to: YLTSKLASGIQSSSGLGKIPKCS*PSLAAA
Trigger: GGCAGCCGCCAAGGACGGCAAGCTGCACTTCGGAAT...CTTCCCTAAGCCGCTGGAAGATTGTATTCCAGATGCTAGCTTAGAGGTCAAGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628829.2
3UTR TCA 72 bp TACAGCATCAGCTCCTCTCTGTTGTTGGAGAGGCCCTaGGCCCCATTACTCACTATACGAGGACCAGAGTGT +
Preference number: 3 (lower is better)
Translates to: YSISSSLLLERP*APLLTIRGPEC
Trigger: ACACTCTGGTCCTCGTATAGTGAGTAATGGGGCTCAGGGCCTCTCCAACAACAGAGAGGAGCTGATGCTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
3UTR GCA 72 bp TTCCAACCCCATTGTCACTCCCAGACATCCTGGAGCTaGACCAAAAGCAGAAAGGGAACGCAGCAAGAAACG +
Preference number: 3 (lower is better)
Translates to: FQPHCHSQTSWS*TKSRKGTQQET
Trigger: CGTTTCTTGCTGCGTTCCCTTTCTGCTTTTGGTGCAGCTCCAGGATGTCTGGGAGTGACAATGGGGTTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534183.5
3UTR-3UTR CAA 90 bp AACGATACCGCCTGTGGAGGTTGCGTAGGCTACATTCCCTTTGCAGTCCAAGGCTTTTCCAGGCGCTTTTaGTTTCTCTCTGTCACCAGT +
Preference number: 3 (lower is better)
Translates to: NDTACGGCVGYIPFAVQGFSRRF*FLSVTS
Trigger: ACTGGTGACAGAGAGAAACAAAAAGCGCCTGGAAAA...GCCTTGGACTGCAAAGGGAATGTAGCCTACGCAACCTCCACAGGCGGTATCGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000534183.5
ENST00000628829.2
3UTR GCA 72 bp GCCGACCATTTTATTAACGATACCGCCTGTGGAGGTTaGGTAGGCTACATTCCCTTTGCAGTCCAAGGCAAC +
Preference number: 3 (lower is better)
Translates to: ADHFINDTACGG*VGYIPFAVQGN
Trigger: GTTGCCTTGGACTGCAAAGGGAATGTAGCCTACGCAACCTCCACAGGCGGTATCGTTAATAAAATGGTCGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534183.5
ENST00000628829.2
3UTR-3UTR CAA 90 bp CTCTCTGTTGTTGGAGAGGCCCTGAGCCCCATTACTCACTATACGAGGACCAGAATGAGGAGACTGTACTaGACCTCTAAGCTAGCATCT +
Preference number: 3 (lower is better)
Translates to: LSVVGEALSPITHYTRTRMRRLY*TSKLAS
Trigger: AGATGCTAGCTTAGAGGTCAAGTACAGTCTCCTCAT...TCTGGTCCTCGTATAGTGAGTAATGGGGCTCAGGGCCTCTCCAACAACAGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
3UTR-3UTR CAA 90 bp TCAGCTCCTCTCTGTTGTTGGAGAGGCCCTGAGCCCCATTACTCACTATACGAGATGAGGAGACTGTACTaGACCTCTAAGCTAGCATCT +
Preference number: 3 (lower is better)
Translates to: SAPLCCWRGPEPHYSLYEMRRLY*TSKLAS
Trigger: AGATGCTAGCTTAGAGGTCAAGTACAGTCTCCTCAT...CTCGTATAGTGAGTAATGGGGCTCAGGGCCTCTCCAACAACAGAGAGGAGCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
3UTR-3UTR CAA 90 bp CATTTCTCTCATCGCTTCAGAACCCGCCCCACAACCAAACATTCAGATGCTTATTGGCTCACCTCAGCTTaGACCTCCTGGGCTCAAGTA +
Preference number: 3 (lower is better)
Translates to: HFSHRFRTRPTTKHSDAYWLTSA*TSWAQV
Trigger: TACTTGAGCCCAGGAGGTCAAAGCTGAGGTGAGCCA...ATAAGCATCTGAATGTTTGGTTGTGGGGCGGGTTCTGAAGCGATGAGAGAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301776.9
ENST00000415229.6
ENST00000628829.2
3UTR-3UTR CAA 90 bp CTCTCTGTTGTTGGAGAGGCCCTGAGCCCCATTACTCACTATACGAGGACCAGATTCCCAGAGGGTCCTTaGGAAGTATCTAGAAATGTC +
Preference number: 3 (lower is better)
Translates to: LSVVGEALSPITHYTRTRFPEGP*EVSRNV
Trigger: GACATTTCTAGATACTTCCAAAGGACCCTCTGGGAA...TCTGGTCCTCGTATAGTGAGTAATGGGGCTCAGGGCCTCTCCAACAACAGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
3UTR-3UTR CAA 90 bp ACTGCGGAAGGCTGCAGGGACCTCTGCCTAGGAAAGCCAGGTATTGTCCAAGGTATGACACAGAGACATTaGTTCACATGTTTTCCTGCT +
Preference number: 3 (lower is better)
Translates to: TAEGCRDLCLGKPGIVQGMTQRH*FTCFPA
Trigger: AGCAGGAAAACATGTGAACAAATGTCTCTGTGTCAT...ACCTTGGACAATACCTGGCTTTCCTAGGCAGAGGTCCCTGCAGCCTTCCGCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528206.1
3UTR TCA 72 bp CCTCTCCAGATGGTAGAGATAATGATCAGTAAATACTaGGGGAACTCAGAGACTGTTGCCGGTGGGGGTCCT +
Preference number: 3 (lower is better)
Translates to: PLQMVEIMISKY*GNSETVAGGGP
Trigger: AGGACCCCCACCGGCAACAGTCTCTGAGTTCCCTCAGTATTTACTGATCATTATCTCTACCATCTGGAGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528206.1
3UTR-3UTR CAA 90 bp AGGTCGGTGATAGTAGTATCGTCAGGATCAATTCCGAAGTGCAGCTTGCCGTCCTTCTACCGTCTTTCCTaGTTCTATGTGGAACAGGGT +
Preference number: 3 (lower is better)
Translates to: RSVIVVSSGSIPKCSLPSFYRLS*FYVEQG
Trigger: ACCCTGTTCCACATAGAACAAGGAAAGACGGTAGAA...GGACGGCAAGCTGCACTTCGGAATTGATCCTGACGATACTACTATCACCGACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628829.2
3UTR-3UTR CAA 90 bp AGGAATACTGCCCACCGAGGAAATGACTTTCTTCACCATGCTGACCACACTGCATTCCCAGAGGGTCCTTaGGAAGTATCTAGAAATGTC +
Preference number: 3 (lower is better)
Translates to: RNTAHRGNDFLHHADHTAFPEGP*EVSRNV
Trigger: GACATTTCTAGATACTTCCAAAGGACCCTCTGGGAA...TGCAGTGTGGTCAGCATGGTGAAGAAAGTCATTTCCTCGGTGGGCAGTATTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
3UTR-3UTR CAA 90 bp CTGTACTTGACCTCTAAGCTAGCATCTGGAATACAATCTTCCAGCGGCTTAGGGTTTTCCAGGCGCTTTTaGTTTCTCTCTGTCACCAGT +
Preference number: 3 (lower is better)
Translates to: LYLTSKLASGIQSSSGLGFSRRF*FLSVTS
Trigger: ACTGGTGACAGAGAGAAACAAAAAGCGCCTGGAAAA...CCCTAAGCCGCTGGAAGATTGTATTCCAGATGCTAGCTTAGAGGTCAAGTACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628829.2
3UTR CCA 72 bp GTGATAAGAGGAAGGCATCTGTCTCCTGCTTGTCCCTaGGCAATAGAATGTCTGGGTTTAAAACCCGATTGT +
Preference number: 3 (lower is better)
Translates to: VIRGRHLSPACP*AIECLGLKPDC
Trigger: ACAATCGGGTTTTAAACCCAGACATTCTATTGCCCAGGGACAAGCAGGAGACAGATGCCTTCCTCTTATCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528206.1
3UTR GCA 72 bp CTTTGCAGTTGTGATAAGAGGAAGGCATCTGTCTCCTaGTTGTCCCTGGGCAATAGAATGTCTGGGTTTAAA +
Preference number: 3 (lower is better)
Translates to: LCSCDKRKASVS*LSLGNRMSGFK
Trigger: TTTAAACCCAGACATTCTATTGCCCAGGGACAAGCAGGAGACAGATGCCTTCCTCTTATCACAACTGCAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528206.1
CDS-3UTR CCA 90 bp AAGTGCAGCTTGCCGTCCTTGGCGGCTGCCCAGGGCATGGAGGTGGAGGTCCACGCAGCTTGCCGTCCTTaGCGGCTGCCCAGGGCATGG +
Preference number: 4 (lower is better)
Translates to: KCSLPSLAAAQGMEVEVHAACRP*RLPRAW
Trigger: CCATGCCCTGGGCAGCCGCCAAGGACGGCAAGCTGC...GTGGACCTCCACCTCCATGCCCTGGGCAGCCGCCAAGGACGGCAAGCTGCACTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628829.2
CDS-3UTR CCA 90 bp CCTTGGCGGCTGCCCAGGGCATGGAGGTGGAGGTCCACTTTGCCACCCAGTCTCCCGGCTCCGCCGCCGTaGACCACTACGATGGGATTC +
Preference number: 4 (lower is better)
Translates to: PWRLPRAWRWRSTLPPSLPAPPP*TTTMGF
Trigger: GAATCCCATCGTAGTGGTCCACGGCGGCGGAGCCGG...GAGACTGGGTGGCAAAGTGGACCTCCACCTCCATGCCCTGGGCAGCCGCCAAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628829.2
CDS-3UTR GCA 90 bp CCTTGGCGGCTGCCCAGGGCATGGAGGTGGAGGTCCACTTTGCCACCCAGTCTCCTGACCATGCCCTGGTaGACTCGCTCCTTCCGATCC +
Preference number: 4 (lower is better)
Translates to: PWRLPRAWRWRSTLPPSLLTMPW*TRSFRS
Trigger: GGATCGGAAGGAGCGAGTGCACCAGGGCATGGTCAG...GAGACTGGGTGGCAAAGTGGACCTCCACCTCCATGCCCTGGGCAGCCGCCAAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628829.2
CDS-3UTR GCA 90 bp ATCAATTCCGAAGTGCAGCTTGCCGTCCTTGGCGGCTGCCCAGGGCATGGAGGTGCCGTCCTTGGCGGCTaGCCAGGGCATGGAGGTGGA +
Preference number: 4 (lower is better)
Translates to: INSEVQLAVLGGCPGHGGAVLGG*PGHGGG
Trigger: TCCACCTCCATGCCCTGGGCAGCCGCCAAGGACGGC...ACCTCCATGCCCTGGGCAGCCGCCAAGGACGGCAAGCTGCACTTCGGAATTGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628829.2
CDS-3UTR GCA 90 bp GCCCACAGGTGTAGAGGGGCTGGCCACCCCTTCATCTGGTGCCCAACGTGGGTGCTCGGCCTCCCAAAGTaGGGGGATTACAGGCGTGAC +
Preference number: 4 (lower is better)
Translates to: AHRCRGAGHPFIWCPTWVLGLPK*GDYRRD
Trigger: GTCACGCCTGTAATCCCCGCACTTTGGGAGGCCGAG...CACCCACGTTGGGCACCAGATGAAGGGGTGGCCAGCCCCTCTACACCTGTGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000528206.1
CDS-3UTR GCA 90 bp CTTGCCGTCCTTGGCGGCTGCCCAGGGCATGGAGGTGGAGGTCCACTTTGCCACAACCCCCATAGCTGCTaGAAACTGCGCTGCGCCTTG +
Preference number: 4 (lower is better)
Translates to: LAVLGGCPGHGGGGPLCHNPHSC*KLRCAL
Trigger: CAAGGCGCAGCGCAGTTTGCAGCAGCTATGGGGGTT...GTGGCAAAGTGGACCTCCACCTCCATGCCCTGGGCAGCCGCCAAGGACGGCAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000628829.2
CDS-3UTR GCA 90 bp CGTCAGGATCAATTCCGAAGTGCAGCTTGCCGTCCTTGGCGGCTGCCCAGGGCATTCCGAAGTGCAGCTTaGCGTCCTTGGCGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: RQDQFRSAACRPWRLPRAFRSAA*RPWRLP
Trigger: GGGCAGCCGCCAAGGACGGCAAGCTGCACTTCGGAA...TGCCCTGGGCAGCCGCCAAGGACGGCAAGCTGCACTTCGGAATTGATCCTGACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628829.2
CDS-3UTR TCA 90 bp GCCCACAGTGTCTGCAGGCTGTGGGTCTCCCACATCTGTCATGTCAGGATCATGCCACGGTGGCGGCTCTaGCCATGCCCTGGTGCACTC +
Preference number: 4 (lower is better)
Translates to: AHSVCRLWVSHICHVRIMPRWRL*PCPGAL
Trigger: GAGTGCACCAGGGCATGGTCAGAGCCGCCACCGTGG...CATGATCCTGACATGACAGATGTGGGAGACCCACAGCCTGCAGACACTGTGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
CDS-3UTR TCA 90 bp ACTGCTTCTACTGCTGCTGTGTCACTTTCAAACAGCTCCACCTCCACCGGCCCCGCCCGATCCGGCTGGTaGGGATGGGGAGGTGGGAAG +
Preference number: 4 (lower is better)
Translates to: TASTAAVSLSNSSTSTGPARSGW*GWGGGK
Trigger: CTTCCCACCTCCCCATCCTCACCAGCCGGATCGGGC...GGGGCCGGTGGAGGTGGAGCTGTTTGAAAGTGACACAGCAGCAGTAGAAGCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
CDS-3UTR GCA 90 bp GCCCACAGGTGTAGAGGGGCTGGCCACCCCTTCATCTGGTGCCCAACGTGGGTGGGCTGCAGGGACCTCTaGCTAGGAAAGCCAGGTATT +
Preference number: 4 (lower is better)
Translates to: AHRCRGAGHPFIWCPTWVGCRDL*LGKPGI
Trigger: AATACCTGGCTTTCCTAGGCAGAGGTCCCTGCAGCC...CACCCACGTTGGGCACCAGATGAAGGGGTGGCCAGCCCCTCTACACCTGTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528206.1
CDS-3UTR CCA 90 bp CCTTCCAGCCCACAGTGTCTGCAGGCTGTGGGTCTCCCACATCTGTCATGTCAGTCCGATCCTTGGAGATaGGACCGGCTCCGCCGCCGT +
Preference number: 4 (lower is better)
Translates to: PSSPQCLQAVGLPHLSCQSDPWR*DRLRRR
Trigger: ACGGCGGCGGAGCCGGTCCCATCTCCAAGGATCGGA...CTGACATGACAGATGTGGGAGACCCACAGCCTGCAGACACTGTGGGCTGGAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
CDS-3UTR TCA 90 bp CCTGGGCTTCGCCCACCACTGCTTCTACTGCTGCTGTGTCACTTTCAAACAGCTCCACGGTGGCGGCTCTaGCCATGCCCTGGTGCACTC +
Preference number: 4 (lower is better)
Translates to: PGLRPPLLLLLLCHFQTAPRWRL*PCPGAL
Trigger: GAGTGCACCAGGGCATGGTCAGAGCCGCCACCGTGG...AGCTGTTTGAAAGTGACACAGCAGCAGTAGAAGCAGTGGTGGGCGAAGCCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
CDS-3UTR TCA 90 bp CGTCAGGATCAATTCCGAAGTGCAGCTTGCCGTCCTTGGCGGCTGCCCAGGGCACCCATGCCCTGTGGTTaGGACGGCTCCGATGTCATT +
Preference number: 4 (lower is better)
Translates to: RQDQFRSAACRPWRLPRAPMPCG*DGSDVI
Trigger: AATGACATCGGAGCCGTCTCAACCACAGGGCATGGG...TGCCCTGGGCAGCCGCCAAGGACGGCAAGCTGCACTTCGGAATTGATCCTGACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628829.2
CDS-3UTR GCA 90 bp AGGCTGTGGGTCTCCCACATCTGTCATGTCAGGATCATGCTGCTGCTTTCTTTCCGCCCTCCCGGAGGATaGCGTAGCCCACGGTGGCGG +
Preference number: 4 (lower is better)
Translates to: RLWVSHICHVRIMLLLSFRPPGG*RSPRWR
Trigger: CCGCCACCGTGGGCTACGGCATCCTCCGGGAGGGCG...GAAAGAAAGCAGCAGCATGATCCTGACATGACAGATGTGGGAGACCCACAGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
CDS-3UTR GCA 90 bp CGTCCTTGGCGGCTGCCCAGGGCATGGAGGTGGAGGTCCACTTTGCCACCCAGTTGCTGCAAACTGCGCTaGGCCTTGGTCAGTCAGAAA +
Preference number: 4 (lower is better)
Translates to: RPWRLPRAWRWRSTLPPSCCKLR*ALVSQK
Trigger: TTTCTGACTGACCAAGGCGCAGCGCAGTTTGCAGCA...ACTGGGTGGCAAAGTGGACCTCCACCTCCATGCCCTGGGCAGCCGCCAAGGACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628829.2
CDS-3UTR GCA 90 bp CGTCCTTGGCGGCTGCCCAGGGCATGGAGGTGGAGGTCCACTTTGCCACCCAGTACCGCCTGTGGAGGTTaGGTAGGCTACATTCCCTTT +
Preference number: 4 (lower is better)
Translates to: RPWRLPRAWRWRSTLPPSTACGG*VGYIPF
Trigger: AAAGGGAATGTAGCCTACGCAACCTCCACAGGCGGT...ACTGGGTGGCAAAGTGGACCTCCACCTCCATGCCCTGGGCAGCCGCCAAGGACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628829.2
CDS-3UTR CCA 90 bp GAGTCCCCAACGCGGCCGACCATTTTATTAACGATACCGCCTGTGGAGGTTGCGCCGGCTCCGCCGCCGTaGACCACTACGATGGGATTC +
Preference number: 4 (lower is better)
Translates to: ESPTRPTILLTIPPVEVAPAPPP*TTTMGF
Trigger: GAATCCCATCGTAGTGGTCCACGGCGGCGGAGCCGG...CGCAACCTCCACAGGCGGTATCGTTAATAAAATGGTCGGCCGCGTTGGGGACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000534183.5
ENST00000628829.2
CDS-3UTR CCA 90 bp CCTTCCAGCCCACAGTGTCTGCAGGCTGTGGGTCTCCCACATCTGTCATGTCAGCCCAGGGCATGGAGGTaGAGGTCCACTTTGCCACCC +
Preference number: 4 (lower is better)
Translates to: PSSPQCLQAVGLPHLSCQPRAWR*RSTLPP
Trigger: GGGTGGCAAAGTGGACCTCCACCTCCATGCCCTGGG...CTGACATGACAGATGTGGGAGACCCACAGCCTGCAGACACTGTGGGCTGGAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
CDS-3UTR CCA 90 bp TTCCCACCTTCCAGCCCACAGTGTCTGCAGGCTGTGGGTCTCCCACATCTGTCACCCAGGGCATGGAGGTaGAGGTCCACTTTGCCACCC +
Preference number: 4 (lower is better)
Translates to: FPPSSPQCLQAVGLPHLSPRAWR*RSTLPP
Trigger: GGGTGGCAAAGTGGACCTCCACCTCCATGCCCTGGG...TGACAGATGTGGGAGACCCACAGCCTGCAGACACTGTGGGCTGGAAGGTGGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
CDS-3UTR GCA 90 bp TTCCCACCTTCCAGCCCACAGTGTCTGCAGGCTGTGGGTCTCCCACATCTGTCACTGACCATGCCCTGGTaGACTCGCTCCTTCCGATCC +
Preference number: 4 (lower is better)
Translates to: FPPSSPQCLQAVGLPHLSLTMPW*TRSFRS
Trigger: GGATCGGAAGGAGCGAGTGCACCAGGGCATGGTCAG...TGACAGATGTGGGAGACCCACAGCCTGCAGACACTGTGGGCTGGAAGGTGGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
CDS-3UTR GCA 90 bp GCCCACAGGTGTAGAGGGGCTGGCCACCCCTTCATCTGGTGCCCAACGTGGGTGAAGGCATCTGTCTCCTaGTTGTCCCTGGGCAATAGA +
Preference number: 4 (lower is better)
Translates to: AHRCRGAGHPFIWCPTWVKASVS*LSLGNR
Trigger: TCTATTGCCCAGGGACAAGCAGGAGACAGATGCCTT...CACCCACGTTGGGCACCAGATGAAGGGGTGGCCAGCCCCTCTACACCTGTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528206.1
CDS-3UTR CCA 90 bp GTTCTTTTCCCTGATGTTCTTGTGCAACGTTCTGAGGGTCACCTGGGCTTCGCCGCCGAGACCTCAAGCTaGGTCGAGCCAGCCCCGCAG +
Preference number: 4 (lower is better)
Translates to: VLFPDVLVQRSEGHLGFAAETSS*VEPAPQ
Trigger: CTGCGGGGCTGGCTCGACCCAGCTTGAGGTCTCGGC...GGCGAAGCCCAGGTGACCCTCAGAACGTTGCACAAGAACATCAGGGAAAAGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
CDS-3UTR CCA 90 bp TTTTCCCTGATGTTCTTGTGCAACGTTCTGAGGGTCACCTGGGCTTCGCCCACCTCCGATCCTTGGAGATaGGACCGGCTCCGCCGCCGT +
Preference number: 4 (lower is better)
Translates to: FSLMFLCNVLRVTWASPTSDPWR*DRLRRR
Trigger: ACGGCGGCGGAGCCGGTCCCATCTCCAAGGATCGGA...GGTGGGCGAAGCCCAGGTGACCCTCAGAACGTTGCACAAGAACATCAGGGAAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
CDS-3UTR CCA 90 bp CCCTGCCTCTCACCCACTCCTGGGAATGAGATGGCGTGCTTCCCCGTTAATGTAGCTCCTTCCGATCCTTaGAGATGGGACCGGCTCCGC +
Preference number: 4 (lower is better)
Translates to: PCLSPTPGNEMACFPVNVAPSDP*RWDRLR
Trigger: GCGGAGCCGGTCCCATCTCCAAGGATCGGAAGGAGC...TACATTAACGGGGAAGCACGCCATCTCATTCCCAGGAGTGGGTGAGAGGCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534183.5
CDS-3UTR CCA 90 bp GCCCACAGTGTCTGCAGGCTGTGGGTCTCCCACATCTGTCATGTCAGGATCATGCGGCTGCCCAGGGCATaGAGGTGGAGGTCCACTTTG +
Preference number: 4 (lower is better)
Translates to: AHSVCRLWVSHICHVRIMRLPRA*RWRSTL
Trigger: CAAAGTGGACCTCCACCTCCATGCCCTGGGCAGCCG...CATGATCCTGACATGACAGATGTGGGAGACCCACAGCCTGCAGACACTGTGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
CDS-3UTR CCA 90 bp GTTGTTGGAGAGGCCCTGAGCCCCATTACTCACTATACGAGGACCAGAGTGTCTGCAGCTTGCCGTCCTTaGCGGCTGCCCAGGGCATGG +
Preference number: 4 (lower is better)
Translates to: VVGEALSPITHYTRTRVSAACRP*RLPRAW
Trigger: CCATGCCCTGGGCAGCCGCCAAGGACGGCAAGCTGC...AGACACTCTGGTCCTCGTATAGTGAGTAATGGGGCTCAGGGCCTCTCCAACAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
CDS-3UTR TCA 90 bp GGCAACGTTAGCATCCCTGTCTCCACTTCTCTCCCCAAGTTGTTCCAAAAAGGCCCACGGTGGCGGCTCTaGCCATGCCCTGGTGCACTC +
Preference number: 4 (lower is better)
Translates to: GNVSIPVSTSLPKLFQKGPRWRL*PCPGAL
Trigger: GAGTGCACCAGGGCATGGTCAGAGCCGCCACCGTGG...GCCTTTTTGGAACAACTTGGGGAGAGAAGTGGAGACAGGGATGCTAACGTTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534183.5
CDS-3UTR TCA 90 bp GAAGTGCAGCTTGCCGTCCTTGGCGGCTGCCCAGGGCATGGAGGTGGAGGTCCATCAGTCAGAAAGCAATaGGGTGTCTGCGTTGAACTC +
Preference number: 4 (lower is better)
Translates to: EVQLAVLGGCPGHGGGGPSVRKQ*GVCVEL
Trigger: GAGTTCAACGCAGACACCTCATTGCTTTCTGACTGA...TGGACCTCCACCTCCATGCCCTGGGCAGCCGCCAAGGACGGCAAGCTGCACTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628829.2
CDS-3UTR GCA 90 bp CCCAGCCCTGCCTCTCACCCACTCCTGGGAATGAGATGGCGTGCTTCCCCGTTAACCGCCTGTGGAGGTTaGGTAGGCTACATTCCCTTT +
Preference number: 4 (lower is better)
Translates to: PSPASHPLLGMRWRASPLTACGG*VGYIPF
Trigger: AAAGGGAATGTAGCCTACGCAACCTCCACAGGCGGT...TAACGGGGAAGCACGCCATCTCATTCCCAGGAGTGGGTGAGAGGCAGGGCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534183.5
CDS-3UTR CCA 90 bp GGGCATTTCTCTCATCGCTTCAGAACCCGCCCCACAACCAAACATTCAGATGCTGCCGAGACCTCAAGCTaGGTCGAGCCAGCCCCGCAG +
Preference number: 4 (lower is better)
Translates to: GHFSHRFRTRPTTKHSDAAETSS*VEPAPQ
Trigger: CTGCGGGGCTGGCTCGACCCAGCTTGAGGTCTCGGC...AGCATCTGAATGTTTGGTTGTGGGGCGGGTTCTGAAGCGATGAGAGAAATGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301776.9
ENST00000415229.6
ENST00000628829.2
CDS-3UTR CCA 90 bp TTTTCCCTGATGTTCTTGTGCAACGTTCTGAGGGTCACCTGGGCTTCGCCCACCGCTCCTTCCGATCCTTaGAGATGGGACCGGCTCCGC +
Preference number: 4 (lower is better)
Translates to: FSLMFLCNVLRVTWASPTAPSDP*RWDRLR
Trigger: GCGGAGCCGGTCCCATCTCCAAGGATCGGAAGGAGC...GGTGGGCGAAGCCCAGGTGACCCTCAGAACGTTGCACAAGAACATCAGGGAAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
CDS-3UTR CCA 90 bp AGGCTGTGGGTCTCCCACATCTGTCATGTCAGGATCATGCTGCTGCTTTCTTTCGCAGCTTGCCGTCCTTaGCGGCTGCCCAGGGCATGG +
Preference number: 4 (lower is better)
Translates to: RLWVSHICHVRIMLLLSFAACRP*RLPRAW
Trigger: CCATGCCCTGGGCAGCCGCCAAGGACGGCAAGCTGC...GAAAGAAAGCAGCAGCATGATCCTGACATGACAGATGTGGGAGACCCACAGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
CDS-3UTR CCA 90 bp CCTTCCAGCCCACAGTGTCTGCAGGCTGTGGGTCTCCCACATCTGTCATGTCAGTTGGCAGGTGGAGGCTaGCTCACGGGAGAACACCAA +
Preference number: 4 (lower is better)
Translates to: PSSPQCLQAVGLPHLSCQLAGGG*LTGEHQ
Trigger: TTGGTGTTCTCCCGTGAGCCAGCCTCCACCTGCCAA...CTGACATGACAGATGTGGGAGACCCACAGCCTGCAGACACTGTGGGCTGGAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
CDS-3UTR CCA 90 bp GTACCCAGGGACACAATACACTGCGGAAGGCTGCAGGGACCTCTGCCTAGGAAAGGCCACCCCTTCATCTaGTGCCCAACGTGGGTGCTT +
Preference number: 4 (lower is better)
Translates to: VPRDTIHCGRLQGPLPRKGHPFI*CPTWVL
Trigger: AAGCACCCACGTTGGGCACCAGATGAAGGGGTGGCC...TTTCCTAGGCAGAGGTCCCTGCAGCCTTCCGCAGTGTATTGTGTCCCTGGGTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528206.1
CDS-3UTR TCA 90 bp GGCATTTCTCTCATCGCTTCAGAACCCGCCCCACAACCAAACATTCAGATGCTTGCCCGATCCGGCTGGTaGGGATGGGGAGGTGGGAAG +
Preference number: 4 (lower is better)
Translates to: GISLIASEPAPQPNIQMLARSGW*GWGGGK
Trigger: CTTCCCACCTCCCCATCCTCACCAGCCGGATCGGGC...AAGCATCTGAATGTTTGGTTGTGGGGCGGGTTCTGAAGCGATGAGAGAAATGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
CDS-3UTR TCA 90 bp ACTGCTTCTACTGCTGCTGTGTCACTTTCAAACAGCTCCACCTCCACCGGCCCCCTTTCTTCACCATGCTaGCCACACTGCACAGCGCCC +
Preference number: 4 (lower is better)
Translates to: TASTAAVSLSNSSTSTGPLSSPC*PHCTAP
Trigger: GGGCGCTGTGCAGTGTGGTCAGCATGGTGAAGAAAG...GGGGCCGGTGGAGGTGGAGCTGTTTGAAAGTGACACAGCAGCAGTAGAAGCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
CDS-3UTR TCA 90 bp ATCAATTCCGAAGTGCAGCTTGCCGTCCTTGGCGGCTGCCCAGGGCATGGAGGTATGAGGTGTCTGCGTTaGACTCGGGATCGTCTTCCA +
Preference number: 4 (lower is better)
Translates to: INSEVQLAVLGGCPGHGGMRCLR*TRDRLP
Trigger: TGGAAGACGATCCCGAGTTCAACGCAGACACCTCAT...ACCTCCATGCCCTGGGCAGCCGCCAAGGACGGCAAGCTGCACTTCGGAATTGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628829.2
CDS-3UTR GCA 90 bp TTCCCACCTTCCAGCCCACAGTGTCTGCAGGCTGTGGGTCTCCCACATCTGTCAGACAGACCCACAACCTaGGTTGAACTCGGGATCGTC +
Preference number: 4 (lower is better)
Translates to: FPPSSPQCLQAVGLPHLSDRPTT*VELGIV
Trigger: GACGATCCCGAGTTCAACGCAGGTTGTGGGTCTGTC...TGACAGATGTGGGAGACCCACAGCCTGCAGACACTGTGGGCTGGAAGGTGGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
CDS-3UTR GCA 90 bp CCACCACTGCTTCTACTGCTGCTGTGTCACTTTCAAACAGCTCCACCTCCACCGTGGAACCCCCATAGCTaGTGCAAACTGCGCTGCGCC +
Preference number: 4 (lower is better)
Translates to: PPLLLLLLCHFQTAPPPPWNPHS*CKLRCA
Trigger: GGCGCAGCGCAGTTTGCAGCAGCTATGGGGGTTCCA...CGGTGGAGGTGGAGCTGTTTGAAAGTGACACAGCAGCAGTAGAAGCAGTGGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
CDS-3UTR GCA 90 bp CCTAGACACGGTGAGTCCCCAACGCGGCCGACCATTTTATTAACGATACCGCCTTGGAACCCCCATAGCTaGTGCAAACTGCGCTGCGCC +
Preference number: 4 (lower is better)
Translates to: PRHGESPTRPTILLTIPPWNPHS*CKLRCA
Trigger: GGCGCAGCGCAGTTTGCAGCAGCTATGGGGGTTCCA...AGGCGGTATCGTTAATAAAATGGTCGGCCGCGTTGGGGACTCACCGTGTCTAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000534183.5
ENST00000628829.2
CDS-3UTR GCA 90 bp GTTGTTGGAGAGGCCCTGAGCCCCATTACTCACTATACGAGGACCAGAGTGTCTTTCCGAAGTGCAGCTTaGCGTCCTTGGCGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: VVGEALSPITHYTRTRVSFRSAA*RPWRLP
Trigger: GGGCAGCCGCCAAGGACGGCAAGCTGCACTTCGGAA...AGACACTCTGGTCCTCGTATAGTGAGTAATGGGGCTCAGGGCCTCTCCAACAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
CDS-3UTR GCA 90 bp GTTGTTGGAGAGGCCCTGAGCCCCATTACTCACTATACGAGGACCAGAGTGTCTCCAGCCCACAGTGTCTaGAGGCTGTGGGTCTCCCAC +
Preference number: 4 (lower is better)
Translates to: VVGEALSPITHYTRTRVSPAHSV*RLWVSH
Trigger: GTGGGAGACCCACAGCCTGCAGACACTGTGGGCTGG...AGACACTCTGGTCCTCGTATAGTGAGTAATGGGGCTCAGGGCCTCTCCAACAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
CDS-3UTR CCA 90 bp GGGCATTTCTCTCATCGCTTCAGAACCCGCCCCACAACCAAACATTCAGATGCTCCGGCTCCGCCGCCGTaGACCACTACGATGGGATTC +
Preference number: 4 (lower is better)
Translates to: GHFSHRFRTRPTTKHSDAPAPPP*TTTMGF
Trigger: GAATCCCATCGTAGTGGTCCACGGCGGCGGAGCCGG...AGCATCTGAATGTTTGGTTGTGGGGCGGGTTCTGAAGCGATGAGAGAAATGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301776.9
ENST00000415229.6
ENST00000628829.2
CDS-3UTR CCA 90 bp GTTCTTTTCCCTGATGTTCTTGTGCAACGTTCTGAGGGTCACCTGGGCTTCGCCGCTCCTTCCGATCCTTaGAGATGGGACCGGCTCCGC +
Preference number: 4 (lower is better)
Translates to: VLFPDVLVQRSEGHLGFAAPSDP*RWDRLR
Trigger: GCGGAGCCGGTCCCATCTCCAAGGATCGGAAGGAGC...GGCGAAGCCCAGGTGACCCTCAGAACGTTGCACAAGAACATCAGGGAAAAGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
CDS-3UTR CCA 90 bp TTCCCACCTTCCAGCCCACAGTGTCTGCAGGCTGTGGGTCTCCCACATCTGTCATTTCCCCATGCCCTGTaGTTGAGACGGCTCCGATGT +
Preference number: 4 (lower is better)
Translates to: FPPSSPQCLQAVGLPHLSFPHAL*LRRLRC
Trigger: ACATCGGAGCCGTCTCAACCACAGGGCATGGGGAAA...TGACAGATGTGGGAGACCCACAGCCTGCAGACACTGTGGGCTGGAAGGTGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
CDS-3UTR CCA 90 bp CCACCACTGCTTCTACTGCTGCTGTGTCACTTTCAAACAGCTCCACCTCCACCGGTTCTGAGGGTCACCTaGGCTTCGCCCACCACTGCT +
Preference number: 4 (lower is better)
Translates to: PPLLLLLLCHFQTAPPPPVLRVT*ASPTTA
Trigger: AGCAGTGGTGGGCGAAGCCCAGGTGACCCTCAGAAC...CGGTGGAGGTGGAGCTGTTTGAAAGTGACACAGCAGCAGTAGAAGCAGTGGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
CDS-3UTR TCA 90 bp CTGTACTTGACCTCTAAGCTAGCATCTGGAATACAATCTTCCAGCGGCTTAGGGCCACGGTGGCGGCTCTaGCCATGCCCTGGTGCACTC +
Preference number: 4 (lower is better)
Translates to: LYLTSKLASGIQSSSGLGPRWRL*PCPGAL
Trigger: GAGTGCACCAGGGCATGGTCAGAGCCGCCACCGTGG...CCCTAAGCCGCTGGAAGATTGTATTCCAGATGCTAGCTTAGAGGTCAAGTACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628829.2
CDS-3UTR TCA 90 bp GAGAAGACAGAATCACGACAGGGTAGACTGGGGGCAACGTTAGCATCCCTGTCTACCCACTCCTGGGAATaGGATGGCGTGCTTCCCCGT +
Preference number: 4 (lower is better)
Translates to: EKTESRQGRLGATLASLSTHSWE*DGVLPR
Trigger: ACGGGGAAGCACGCCATCTCATTCCCAGGAGTGGGT...AGACAGGGATGCTAACGTTGCCCCCAGTCTACCCTGTCGTGATTCTGTCTTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534183.5
CDS-3UTR GCA 90 bp CCTTCCAGCCCACAGTGTCTGCAGGCTGTGGGTCTCCCACATCTGTCATGTCAGTGCTGCAAACTGCGCTaGGCCTTGGTCAGTCAGAAA +
Preference number: 4 (lower is better)
Translates to: PSSPQCLQAVGLPHLSCQCCKLR*ALVSQK
Trigger: TTTCTGACTGACCAAGGCGCAGCGCAGTTTGCAGCA...CTGACATGACAGATGTGGGAGACCCACAGCCTGCAGACACTGTGGGCTGGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
CDS-3UTR GCA 90 bp AGCCCTGCCTCTCACCCACTCCTGGGAATGAGATGGCGTGCTTCCCCGTTAATGTGCTGCAAACTGCGCTaGGCCTTGGTCAGTCAGAAA +
Preference number: 4 (lower is better)
Translates to: SPASHPLLGMRWRASPLMCCKLR*ALVSQK
Trigger: TTTCTGACTGACCAAGGCGCAGCGCAGTTTGCAGCA...CATTAACGGGGAAGCACGCCATCTCATTCCCAGGAGTGGGTGAGAGGCAGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534183.5
CDS-3UTR GCA 90 bp GAGTCCCCAACGCGGCCGACCATTTTATTAACGATACCGCCTGTGGAGGTTGCGATAGCTGCTGCAAACTaGGCTGCGCCTTGGTCAGTC +
Preference number: 4 (lower is better)
Translates to: ESPTRPTILLTIPPVEVAIAAAN*AAPWSV
Trigger: GACTGACCAAGGCGCAGCGCAGTTTGCAGCAGCTAT...CGCAACCTCCACAGGCGGTATCGTTAATAAAATGGTCGGCCGCGTTGGGGACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000534183.5
ENST00000628829.2
CDS-3UTR GCA 90 bp GTTCTTTTCCCTGATGTTCTTGTGCAACGTTCTGAGGGTCACCTGGGCTTCGCCTGGAACCCCCATAGCTaGTGCAAACTGCGCTGCGCC +
Preference number: 4 (lower is better)
Translates to: VLFPDVLVQRSEGHLGFAWNPHS*CKLRCA
Trigger: GGCGCAGCGCAGTTTGCAGCAGCTATGGGGGTTCCA...GGCGAAGCCCAGGTGACCCTCAGAACGTTGCACAAGAACATCAGGGAAAAGAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
CDS-3UTR GCA 90 bp GCTCAAGTAATCCTCCTAATACGGGCATTTCTCTCATCGCTTCAGAACCCGCCCTTCCGAAGTGCAGCTTaGCGTCCTTGGCGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: AQVILLIRAFLSSLQNPPFRSAA*RPWRLP
Trigger: GGGCAGCCGCCAAGGACGGCAAGCTGCACTTCGGAA...GGGCGGGTTCTGAAGCGATGAGAGAAATGCCCGTATTAGGAGGATTACTTGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301776.9
ENST00000415229.6
ENST00000628829.2
CDS-3UTR CCA 90 bp TTTATTAACGATACCGCCTGTGGAGGTTGCGTAGGCTACATTCCCTTTGCAGTCGCCGAGACCTCAAGCTaGGTCGAGCCAGCCCCGCAG +
Preference number: 4 (lower is better)
Translates to: FINDTACGGCVGYIPFAVAETSS*VEPAPQ
Trigger: CTGCGGGGCTGGCTCGACCCAGCTTGAGGTCTCGGC...GACTGCAAAGGGAATGTAGCCTACGCAACCTCCACAGGCGGTATCGTTAATAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534183.5
ENST00000628829.2
CDS-3UTR CCA 90 bp GCATTTCTCTCATCGCTTCAGAACCCGCCCCACAACCAAACATTCAGATGCTTAGCCGAGACCTCAAGCTaGGTCGAGCCAGCCCCGCAG +
Preference number: 4 (lower is better)
Translates to: AFLSSLQNPPHNQTFRCLAETSS*VEPAPQ
Trigger: CTGCGGGGCTGGCTCGACCCAGCTTGAGGTCTCGGC...TAAGCATCTGAATGTTTGGTTGTGGGGCGGGTTCTGAAGCGATGAGAGAAATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301776.9
ENST00000415229.6
ENST00000628829.2
CDS-3UTR CCA 90 bp ACTGCTTCTACTGCTGCTGTGTCACTTTCAAACAGCTCCACCTCCACCGGCCCCTTTCCCCATGCCCTGTaGTTGAGACGGCTCCGATGT +
Preference number: 4 (lower is better)
Translates to: TASTAAVSLSNSSTSTGPFPHAL*LRRLRC
Trigger: ACATCGGAGCCGTCTCAACCACAGGGCATGGGGAAA...GGGGCCGGTGGAGGTGGAGCTGTTTGAAAGTGACACAGCAGCAGTAGAAGCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
CDS-3UTR CCA 90 bp GGGCATTTCTCTCATCGCTTCAGAACCCGCCCCACAACCAAACATTCAGATGCTCGGCTGCCCAGGGCATaGAGGTGGAGGTCCACTTTG +
Preference number: 4 (lower is better)
Translates to: GHFSHRFRTRPTTKHSDARLPRA*RWRSTL
Trigger: CAAAGTGGACCTCCACCTCCATGCCCTGGGCAGCCG...AGCATCTGAATGTTTGGTTGTGGGGCGGGTTCTGAAGCGATGAGAGAAATGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301776.9
ENST00000415229.6
ENST00000628829.2
CDS-3UTR CCA 90 bp CAGCTCCTCTCTGTTGTTGGAGAGGCCCTGAGCCCCATTACTCACTATACGAGGTTGGCAGGTGGAGGCTaGCTCACGGGAGAACACCAA +
Preference number: 4 (lower is better)
Translates to: QLLSVVGEALSPITHYTRLAGGG*LTGEHQ
Trigger: TTGGTGTTCTCCCGTGAGCCAGCCTCCACCTGCCAA...CCTCGTATAGTGAGTAATGGGGCTCAGGGCCTCTCCAACAACAGAGAGGAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
CDS-3UTR CCA 90 bp CCACCACTGCTTCTACTGCTGCTGTGTCACTTTCAAACAGCTCCACCTCCACCGGGACCAGAGTGTCTTTaGCAGGTGGAGGCTGGCTCA +
Preference number: 4 (lower is better)
Translates to: PPLLLLLLCHFQTAPPPPGPECL*QVEAGS
Trigger: TGAGCCAGCCTCCACCTGCCAAAGACACTCTGGTCC...CGGTGGAGGTGGAGCTGTTTGAAAGTGACACAGCAGCAGTAGAAGCAGTGGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
3UTR CAA 72 bp ATAGTAGTATCGTCAGGATCAATTCCGAAGTGCAGCTaGCCGTCCTTGGCGGCTGCCCAGGGCATGGAGGTG +
Preference number: 4 (lower is better)
Translates to: IVVSSGSIPKCS*PSLAAAQGMEV
Trigger: CACCTCCATGCCCTGGGCAGCCGCCAAGGACGGCAAGCTGCACTTCGGAATTGATCCTGACGATACTACTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628829.2
CDS-3UTR TCA 90 bp GTTCTTTTCCCTGATGTTCTTGTGCAACGTTCTGAGGGTCACCTGGGCTTCGCCCCCATGCCCTGTGGTTaGGACGGCTCCGATGTCATT +
Preference number: 4 (lower is better)
Translates to: VLFPDVLVQRSEGHLGFAPMPCG*DGSDVI
Trigger: AATGACATCGGAGCCGTCTCAACCACAGGGCATGGG...GGCGAAGCCCAGGTGACCCTCAGAACGTTGCACAAGAACATCAGGGAAAAGAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
CDS-3UTR TCA 90 bp GCATCAGCTCCTCTCTGTTGTTGGAGAGGCCCTGAGCCCCATTACTCACTATACTCTTGTGCAACGTTCTaGGGGTCACCTGGGCTTCGC +
Preference number: 4 (lower is better)
Translates to: ASAPLCCWRGPEPHYSLYSCATF*GSPGLR
Trigger: GCGAAGCCCAGGTGACCCTCAGAACGTTGCACAAGA...GTATAGTGAGTAATGGGGCTCAGGGCCTCTCCAACAACAGAGAGGAGCTGATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
CDS-3UTR TCA 90 bp GTACCCAGGGACACAATACACTGCGGAAGGCTGCAGGGACCTCTGCCTAGGAAACCCCATGTGATAGCCTaGGATATGGCCTTGTGGGAA +
Preference number: 4 (lower is better)
Translates to: VPRDTIHCGRLQGPLPRKPHVIA*DMALWE
Trigger: TTCCCACAAGGCCATATCTCAGGCTATCACATGGGG...TTTCCTAGGCAGAGGTCCCTGCAGCCTTCCGCAGTGTATTGTGTCCCTGGGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528206.1
CDS-3UTR GCA 90 bp AGGCTGTGGGTCTCCCACATCTGTCATGTCAGGATCATGCTGCTGCTTTCTTTCCTGACCATGCCCTGGTaGACTCGCTCCTTCCGATCC +
Preference number: 4 (lower is better)
Translates to: RLWVSHICHVRIMLLLSFLTMPW*TRSFRS
Trigger: GGATCGGAAGGAGCGAGTGCACCAGGGCATGGTCAG...GAAAGAAAGCAGCAGCATGATCCTGACATGACAGATGTGGGAGACCCACAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
CDS-3UTR GCA 90 bp GCCCACAGTGTCTGCAGGCTGTGGGTCTCCCACATCTGTCATGTCAGGATCATGTGCTATACACTGGACTaGGGACACTGCTCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: AHSVCRLWVSHICHVRIMCYTLD*GHCSCR
Trigger: TCTGCAGGAGCAGTGTCCGCAGTCCAGTGTATAGCA...CATGATCCTGACATGACAGATGTGGGAGACCCACAGCCTGCAGACACTGTGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
CDS-3UTR GCA 90 bp CTCTCTGTTGTTGGAGAGGCCCTGAGCCCCATTACTCACTATACGAGGACCAGAAACCCCCATAGCTGCTaGAAACTGCGCTGCGCCTTG +
Preference number: 4 (lower is better)
Translates to: LSVVGEALSPITHYTRTRNPHSC*KLRCAL
Trigger: CAAGGCGCAGCGCAGTTTGCAGCAGCTATGGGGGTT...TCTGGTCCTCGTATAGTGAGTAATGGGGCTCAGGGCCTCTCCAACAACAGAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
CDS-3UTR GCA 90 bp GAGAAGACAGAATCACGACAGGGTAGACTGGGGGCAACGTTAGCATCCCTGTCTAACCCCCATAGCTGCTaGAAACTGCGCTGCGCCTTG +
Preference number: 4 (lower is better)
Translates to: EKTESRQGRLGATLASLSNPHSC*KLRCAL
Trigger: CAAGGCGCAGCGCAGTTTGCAGCAGCTATGGGGGTT...AGACAGGGATGCTAACGTTGCCCCCAGTCTACCCTGTCGTGATTCTGTCTTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000534183.5
CDS-3UTR GCA 90 bp GGGCATTTCTCTCATCGCTTCAGAACCCGCCCCACAACCAAACATTCAGATGCTTGGAACCCCCATAGCTaGTGCAAACTGCGCTGCGCC +
Preference number: 4 (lower is better)
Translates to: GHFSHRFRTRPTTKHSDAWNPHS*CKLRCA
Trigger: GGCGCAGCGCAGTTTGCAGCAGCTATGGGGGTTCCA...AGCATCTGAATGTTTGGTTGTGGGGCGGGTTCTGAAGCGATGAGAGAAATGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301776.9
ENST00000415229.6
ENST00000628829.2
CDS-3UTR GCA 90 bp CAGCTCCTCTCTGTTGTTGGAGAGGCCCTGAGCCCCATTACTCACTATACGAGGAGGATGCTTTCCCCATaGCCTGTGGTTGAGACGGCT +
Preference number: 4 (lower is better)
Translates to: QLLSVVGEALSPITHYTRRMLSP*PVVETA
Trigger: AGCCGTCTCAACCACAGGGCATGGGGAAAGCATCCT...CCTCGTATAGTGAGTAATGGGGCTCAGGGCCTCTCCAACAACAGAGAGGAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
CDS-3UTR CCA 90 bp GCATCCCTGTCTCCACTTCTCTCCCCAAGTTGTTCCAAAAAGGCATGCAATCTATCCGATCCTTGGAGATaGGACCGGCTCCGCCGCCGT +
Preference number: 4 (lower is better)
Translates to: ASLSPLLSPSCSKKACNLSDPWR*DRLRRR
Trigger: ACGGCGGCGGAGCCGGTCCCATCTCCAAGGATCGGA...TAGATTGCATGCCTTTTTGGAACAACTTGGGGAGAGAAGTGGAGACAGGGATGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534183.5
CDS-3UTR CCA 90 bp CTCATCGCTTCAGAACCCGCCCCACAACCAAACATTCAGATGCTTATTAAGGCATCCGATCCTTGGAGATaGGACCGGCTCCGCCGCCGT +
Preference number: 4 (lower is better)
Translates to: LIASEPAPQPNIQMLIKASDPWR*DRLRRR
Trigger: ACGGCGGCGGAGCCGGTCCCATCTCCAAGGATCGGA...TGCCTTAATAAGCATCTGAATGTTTGGTTGTGGGGCGGGTTCTGAAGCGATGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301776.9
ENST00000415229.6
ENST00000628829.2
CDS-3UTR CCA 90 bp GGCATTTCTCTCATCGCTTCAGAACCCGCCCCACAACCAAACATTCAGATGCTTGCTCCTTCCGATCCTTaGAGATGGGACCGGCTCCGC +
Preference number: 4 (lower is better)
Translates to: GISLIASEPAPQPNIQMLAPSDP*RWDRLR
Trigger: GCGGAGCCGGTCCCATCTCCAAGGATCGGAAGGAGC...AAGCATCTGAATGTTTGGTTGTGGGGCGGGTTCTGAAGCGATGAGAGAAATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301776.9
ENST00000415229.6
ENST00000628829.2
CDS-3UTR CCA 90 bp GTCGGTGATAGTAGTATCGTCAGGATCAATTCCGAAGTGCAGCTTGCCGTCCTTCGGCTGCCCAGGGCATaGAGGTGGAGGTCCACTTTG +
Preference number: 4 (lower is better)
Translates to: VGDSSIVRINSEVQLAVLRLPRA*RWRSTL
Trigger: CAAAGTGGACCTCCACCTCCATGCCCTGGGCAGCCG...AAGGACGGCAAGCTGCACTTCGGAATTGATCCTGACGATACTACTATCACCGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628829.2
3UTR CAA 72 bp AGCCCCATTACTCACTATACGAGGACCAGAGTGTCTTaGGCAGGTGGAGGCTGGCTCACGGGAGAACACCAA +
Preference number: 4 (lower is better)
Translates to: SPITHYTRTRVS*AGGGWLTGEHQ
Trigger: TTGGTGTTCTCCCGTGAGCCAGCCTCCACCTGCCAAAGACACTCTGGTCCTCGTATAGTGAGTAATGGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
3UTR CAA 72 bp GGTTCACCTTCAGGATGCTTTCCCCATGCCCTGTGGTaGAGACGGCTCCGATGTCATTGTCGGCATAACCTC +
Preference number: 4 (lower is better)
Translates to: GSPSGCFPHALW*RRLRCHCRHNL
Trigger: GAGGTTATGCCGACAATGACATCGGAGCCGTCTCAACCACAGGGCATGGGGAAAGCATCCTGAAGGTGAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628829.2
CDS-3UTR TCA 90 bp GTTGTTGGAGAGGCCCTGAGCCCCATTACTCACTATACGAGGACCAGAGTGTCTACCCACAACCTGCGTTaGACTCGGGATCGTCTTCCA +
Preference number: 4 (lower is better)
Translates to: VVGEALSPITHYTRTRVSTHNLR*TRDRLP
Trigger: TGGAAGACGATCCCGAGTTCAACGCAGGTTGTGGGT...AGACACTCTGGTCCTCGTATAGTGAGTAATGGGGCTCAGGGCCTCTCCAACAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
CDS-3UTR TCA 90 bp GCTCAAGTAATCCTCCTAATACGGGCATTTCTCTCATCGCTTCAGAACCCGCCCCTTTCTTCACCATGCTaGCCACACTGCACAGCGCCC +
Preference number: 4 (lower is better)
Translates to: AQVILLIRAFLSSLQNPPLSSPC*PHCTAP
Trigger: GGGCGCTGTGCAGTGTGGTCAGCATGGTGAAGAAAG...GGGCGGGTTCTGAAGCGATGAGAGAAATGCCCGTATTAGGAGGATTACTTGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
CDS-3UTR TCA 90 bp TTCCCACCTTCCAGCCCACAGTGTCTGCAGGCTGTGGGTCTCCCACATCTGTCAGACAGACTAAAACGTTaGGCACGGATGATACAGCAG +
Preference number: 4 (lower is better)
Translates to: FPPSSPQCLQAVGLPHLSDRLKR*ARMIQQ
Trigger: CTGCTGTATCATCCGTGCTCAACGTTTTAGTCTGTC...TGACAGATGTGGGAGACCCACAGCCTGCAGACACTGTGGGCTGGAAGGTGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
CDS-3UTR GCA 90 bp TTTTCCCTGATGTTCTTGTGCAACGTTCTGAGGGTCACCTGGGCTTCGCCCACCTGCGGACACTGCTCCTaGAGACAGGTCTTTTCCATC +
Preference number: 4 (lower is better)
Translates to: FSLMFLCNVLRVTWASPTCGHCS*RQVFSI
Trigger: GATGGAAAAGACCTGTCTGCAGGAGCAGTGTCCGCA...GGTGGGCGAAGCCCAGGTGACCCTCAGAACGTTGCACAAGAACATCAGGGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
CDS-3UTR GCA 90 bp CTCTCTGTTGTTGGAGAGGCCCTGAGCCCCATTACTCACTATACGAGGACCAGACTGGACTGCGGACACTaGTCCTGCAGACAGGTCTTT +
Preference number: 4 (lower is better)
Translates to: LSVVGEALSPITHYTRTRLDCGH*SCRQVF
Trigger: AAAGACCTGTCTGCAGGAGCAGTGTCCGCAGTCCAG...TCTGGTCCTCGTATAGTGAGTAATGGGGCTCAGGGCCTCTCCAACAACAGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
CDS-3UTR GCA 90 bp GCATCAGCTCCTCTCTGTTGTTGGAGAGGCCCTGAGCCCCATTACTCACTATACATAGCTGCTGCAAACTaGGCTGCGCCTTGGTCAGTC +
Preference number: 4 (lower is better)
Translates to: ASAPLCCWRGPEPHYSLYIAAAN*AAPWSV
Trigger: GACTGACCAAGGCGCAGCGCAGTTTGCAGCAGCTAT...GTATAGTGAGTAATGGGGCTCAGGGCCTCTCCAACAACAGAGAGGAGCTGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
CDS-3UTR GCA 90 bp CACTCCCAGACATCCTGGAGCTGCACCAAAAGCAGAAAGGGAACGCAGCAAGAAATAGCTGCTGCAAACTaGGCTGCGCCTTGGTCAGTC +
Preference number: 4 (lower is better)
Translates to: HSQTSWSCTKSRKGTQQEIAAAN*AAPWSV
Trigger: GACTGACCAAGGCGCAGCGCAGTTTGCAGCAGCTAT...TTCTTGCTGCGTTCCCTTTCTGCTTTTGGTGCAGCTCCAGGATGTCTGGGAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534183.5
CDS-3UTR GCA 90 bp GGGCATTTCTCTCATCGCTTCAGAACCCGCCCCACAACCAAACATTCAGATGCTAACCCCCATAGCTGCTaGAAACTGCGCTGCGCCTTG +
Preference number: 4 (lower is better)
Translates to: GHFSHRFRTRPTTKHSDANPHSC*KLRCAL
Trigger: CAAGGCGCAGCGCAGTTTGCAGCAGCTATGGGGGTT...AGCATCTGAATGTTTGGTTGTGGGGCGGGTTCTGAAGCGATGAGAGAAATGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301776.9
ENST00000415229.6
ENST00000628829.2
CDS-3UTR GCA 90 bp CAGCTCCTCTCTGTTGTTGGAGAGGCCCTGAGCCCCATTACTCACTATACGAGGGGTGGAGGTCCACTTTaGCACCCAGTCTCCTGTTTT +
Preference number: 4 (lower is better)
Translates to: QLLSVVGEALSPITHYTRGGGPL*HPVSCF
Trigger: AAAACAGGAGACTGGGTGGCAAAGTGGACCTCCACC...CCTCGTATAGTGAGTAATGGGGCTCAGGGCCTCTCCAACAACAGAGAGGAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
CDS-3UTR GCA 90 bp CCTGGGCTTCGCCCACCACTGCTTCTACTGCTGCTGTGTCACTTTCAAACAGCTGGTGGAGGTCCACTTTaGCACCCAGTCTCCTGTTTT +
Preference number: 4 (lower is better)
Translates to: PGLRPPLLLLLLCHFQTAGGGPL*HPVSCF
Trigger: AAAACAGGAGACTGGGTGGCAAAGTGGACCTCCACC...AGCTGTTTGAAAGTGACACAGCAGCAGTAGAAGCAGTGGTGGGCGAAGCCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
CDS-3UTR CCA 90 bp CTCTCTGTTGTTGGAGAGGCCCTGAGCCCCATTACTCACTATACGAGGACCAGACGTGGACCACTACGATaGGATTCATGTCGGCGGATC +
Preference number: 4 (lower is better)
Translates to: LSVVGEALSPITHYTRTRRGPLR*DSCRRI
Trigger: GATCCGCCGACATGAATCCCATCGTAGTGGTCCACG...TCTGGTCCTCGTATAGTGAGTAATGGGGCTCAGGGCCTCTCCAACAACAGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
CDS-3UTR CCA 90 bp CATTTCTCTCATCGCTTCAGAACCCGCCCCACAACCAAACATTCAGATGCTTATCCGGCTCCGCCGCCGTaGACCACTACGATGGGATTC +
Preference number: 4 (lower is better)
Translates to: HFSHRFRTRPTTKHSDAYPAPPP*TTTMGF
Trigger: GAATCCCATCGTAGTGGTCCACGGCGGCGGAGCCGG...ATAAGCATCTGAATGTTTGGTTGTGGGGCGGGTTCTGAAGCGATGAGAGAAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301776.9
ENST00000415229.6
ENST00000628829.2
CDS-3UTR CCA 90 bp ATCAATTCCGAAGTGCAGCTTGCCGTCCTTGGCGGCTGCCCAGGGCATGGAGGTTTTCCTTGTTCTATGTaGAACAGGGTGAGTCTAGCC +
Preference number: 4 (lower is better)
Translates to: INSEVQLAVLGGCPGHGGFPCSM*NRVSLA
Trigger: GGCTAGACTCACCCTGTTCCACATAGAACAAGGAAA...ACCTCCATGCCCTGGGCAGCCGCCAAGGACGGCAAGCTGCACTTCGGAATTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628829.2
CDS-3UTR TCA 90 bp AGGAATACTGCCCACCGAGGAAATGACTTTCTTCACCATGCTGACCACACTGCACCCATGCCCTGTGGTTaGGACGGCTCCGATGTCATT +
Preference number: 4 (lower is better)
Translates to: RNTAHRGNDFLHHADHTAPMPCG*DGSDVI
Trigger: AATGACATCGGAGCCGTCTCAACCACAGGGCATGGG...TGCAGTGTGGTCAGCATGGTGAAGAAAGTCATTTCCTCGGTGGGCAGTATTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
CDS-3UTR TCA 90 bp GAGTCCCCAACGCGGCCGACCATTTTATTAACGATACCGCCTGTGGAGGTTGCGTCAGTCAGAAAGCAATaGGGTGTCTGCGTTGAACTC +
Preference number: 4 (lower is better)
Translates to: ESPTRPTILLTIPPVEVASVRKQ*GVCVEL
Trigger: GAGTTCAACGCAGACACCTCATTGCTTTCTGACTGA...CGCAACCTCCACAGGCGGTATCGTTAATAAAATGGTCGGCCGCGTTGGGGACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000534183.5
ENST00000628829.2
CDS-3UTR GCA 90 bp GTTCTTTTCCCTGATGTTCTTGTGCAACGTTCTGAGGGTCACCTGGGCTTCGCCTGCTATACACTGGACTaGGGACACTGCTCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: VLFPDVLVQRSEGHLGFACYTLD*GHCSCR
Trigger: TCTGCAGGAGCAGTGTCCGCAGTCCAGTGTATAGCA...GGCGAAGCCCAGGTGACCCTCAGAACGTTGCACAAGAACATCAGGGAAAAGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
CDS-3UTR GCA 90 bp CTCTCTGTTGTTGGAGAGGCCCTGAGCCCCATTACTCACTATACGAGGACCAGATGCTGCAAACTGCGCTaGGCCTTGGTCAGTCAGAAA +
Preference number: 4 (lower is better)
Translates to: LSVVGEALSPITHYTRTRCCKLR*ALVSQK
Trigger: TTTCTGACTGACCAAGGCGCAGCGCAGTTTGCAGCA...TCTGGTCCTCGTATAGTGAGTAATGGGGCTCAGGGCCTCTCCAACAACAGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
CDS-3UTR GCA 90 bp TTTTCCCTGATGTTCTTGTGCAACGTTCTGAGGGTCACCTGGGCTTCGCCCACCAGGCTACATTCCCTTTaGAGTCCAAGGCAACAGCAC +
Preference number: 4 (lower is better)
Translates to: FSLMFLCNVLRVTWASPTRLHSL*SPRQQH
Trigger: GTGCTGTTGCCTTGGACTGCAAAGGGAATGTAGCCT...GGTGGGCGAAGCCCAGGTGACCCTCAGAACGTTGCACAAGAACATCAGGGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
CDS-3UTR GCA 90 bp GTTCTTTTCCCTGATGTTCTTGTGCAACGTTCTGAGGGTCACCTGGGCTTCGCCACCGCCTGTGGAGGTTaGGTAGGCTACATTCCCTTT +
Preference number: 4 (lower is better)
Translates to: VLFPDVLVQRSEGHLGFATACGG*VGYIPF
Trigger: AAAGGGAATGTAGCCTACGCAACCTCCACAGGCGGT...GGCGAAGCCCAGGTGACCCTCAGAACGTTGCACAAGAACATCAGGGAAAAGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
CDS-3UTR GCA 90 bp GTTGTTGGAGAGGCCCTGAGCCCCATTACTCACTATACGAGGACCAGAGTGTCTACCGCCTGTGGAGGTTaGGTAGGCTACATTCCCTTT +
Preference number: 4 (lower is better)
Translates to: VVGEALSPITHYTRTRVSTACGG*VGYIPF
Trigger: AAAGGGAATGTAGCCTACGCAACCTCCACAGGCGGT...AGACACTCTGGTCCTCGTATAGTGAGTAATGGGGCTCAGGGCCTCTCCAACAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
CDS-3UTR GCA 90 bp ATGGAATGTCAAGTTAAGCAAATTCTTTCCAGAGAGAAGGTGAGCCTGACAGACGCCGTCCTTGGCGGCTaGCCAGGGCATGGAGGTGGA +
Preference number: 4 (lower is better)
Translates to: MECQVKQILSREKVSLTDAVLGG*PGHGGG
Trigger: TCCACCTCCATGCCCTGGGCAGCCGCCAAGGACGGC...GTCTGTCAGGCTCACCTTCTCTCTGGAAAGAATTTGCTTAACTTGACATTCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
CDS-3UTR GCA 90 bp GCTCAAGTAATCCTCCTAATACGGGCATTTCTCTCATCGCTTCAGAACCCGCCCGGATCAATTCCGAAGTaGAGCTTGCCGTCCTTGGCG +
Preference number: 4 (lower is better)
Translates to: AQVILLIRAFLSSLQNPPGSIPK*SLPSLA
Trigger: CGCCAAGGACGGCAAGCTGCACTTCGGAATTGATCC...GGGCGGGTTCTGAAGCGATGAGAGAAATGCCCGTATTAGGAGGATTACTTGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301776.9
ENST00000415229.6
ENST00000628829.2
CDS-3UTR GCA 90 bp GACCTCTGCCTAGGAAAGCCAGGTATTGTCCAAGGTTTCTCCCCATGTGATAGCTGTCTCTGTCTCTCCTaGCTCAGCCTCCTGAGTAGC +
Preference number: 4 (lower is better)
Translates to: DLCLGKPGIVQGFSPCDSCLCLS*LSLLSS
Trigger: GCTACTCAGGAGGCTGAGGCAGGAGAGACAGAGACA...GCTATCACATGGGGAGAAACCTTGGACAATACCTGGCTTTCCTAGGCAGAGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528206.1
CDS-3UTR CCA 90 bp TACTTGACCTCTAAGCTAGCATCTGGAATACAATCTTCCAGCGGCTTAGGGAAGCCCAGGGCATGGAGGTaGAGGTCCACTTTGCCACCC +
Preference number: 4 (lower is better)
Translates to: YLTSKLASGIQSSSGLGKPRAWR*RSTLPP
Trigger: GGGTGGCAAAGTGGACCTCCACCTCCATGCCCTGGG...CTTCCCTAAGCCGCTGGAAGATTGTATTCCAGATGCTAGCTTAGAGGTCAAGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628829.2
CDS-3UTR CCA 90 bp TTCCCACCTTCCAGCCCACAGTGTCTGCAGGCTGTGGGTCTCCCACATCTGTCACAGATTAGGAAGCTATaGATTCCCAGAGGGTCCTTT +
Preference number: 4 (lower is better)
Translates to: FPPSSPQCLQAVGLPHLSQIRKL*IPRGSF
Trigger: AAAGGACCCTCTGGGAATCCATAGCTTCCTAATCTG...TGACAGATGTGGGAGACCCACAGCCTGCAGACACTGTGGGCTGGAAGGTGGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
CDS-3UTR CCA 90 bp GCAACGTTAGCATCCCTGTCTCCACTTCTCTCCCCAAGTTGTTCCAAAAAGGCAGCAGGAGGCATCCCTTaGTCCTACCTAGACACGGTG +
Preference number: 4 (lower is better)
Translates to: ATLASLSPLLSPSCSKKAAGGIP*SYLDTV
Trigger: CACCGTGTCTAGGTAGGACCAAGGGATGCCTCCTGC...TGCCTTTTTGGAACAACTTGGGGAGAGAAGTGGAGACAGGGATGCTAACGTTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534183.5
3UTR CAA 72 bp GAGGTGGAGGTCCACTTTGCCACCCAGTCTCCTGTTTaGCTAACCACGATGAGGCCACCTAAACCTTTAACC +
Preference number: 4 (lower is better)
Translates to: EVEVHFATQSPV*LTTMRPPKPLT
Trigger: GGTTAAAGGTTTAGGTGGCCTCATCGTGGTTAGCAAAACAGGAGACTGGGTGGCAAAGTGGACCTCCACCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628829.2
CDS-3UTR TCA 90 bp CCTTCCAGCCCACAGTGTCTGCAGGCTGTGGGTCTCCCACATCTGTCATGTCAGAGGCAACAAAACAAGTaGCAGACGGGACAATTTTTC +
Preference number: 4 (lower is better)
Translates to: PSSPQCLQAVGLPHLSCQRQQNK*QTGQFF
Trigger: GAAAAATTGTCCCGTCTGTCACTTGTTTTGTTGCCT...CTGACATGACAGATGTGGGAGACCCACAGCCTGCAGACACTGTGGGCTGGAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
CDS-3UTR TCA 90 bp GGCATTTCTCTCATCGCTTCAGAACCCGCCCCACAACCAAACATTCAGATGCTTGAGGGGGCTCCTCTGTaGACCCAAGAAACTTCAAGG +
Preference number: 4 (lower is better)
Translates to: GISLIASEPAPQPNIQMLEGAPL*TQETSR
Trigger: CCTTGAAGTTTCTTGGGTTCACAGAGGAGCCCCCTC...AAGCATCTGAATGTTTGGTTGTGGGGCGGGTTCTGAAGCGATGAGAGAAATGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
CDS-3UTR TCA 90 bp GCATCAGCTCCTCTCTGTTGTTGGAGAGGCCCTGAGCCCCATTACTCACTATACTTGTTGGAGAGGCCCTaGGCCCCATTACTCACTATA +
Preference number: 4 (lower is better)
Translates to: ASAPLCCWRGPEPHYSLYLLERP*APLLTI
Trigger: TATAGTGAGTAATGGGGCTCAGGGCCTCTCCAACAA...GTATAGTGAGTAATGGGGCTCAGGGCCTCTCCAACAACAGAGAGGAGCTGATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
CDS-3UTR GCA 90 bp AAGGCATGCAATCTAGTAAAAACAGTGGCGCCAGATACAAACACCCTCTCAAGGCTGACCATGCCCTGGTaGACTCGCTCCTTCCGATCC +
Preference number: 4 (lower is better)
Translates to: KACNLVKTVAPDTNTLSRLTMPW*TRSFRS
Trigger: GGATCGGAAGGAGCGAGTGCACCAGGGCATGGTCAG...CCTTGAGAGGGTGTTTGTATCTGGCGCCACTGTTTTTACTAGATTGCATGCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534183.5
CDS-3UTR GCA 90 bp GGCATTTCTCTCATCGCTTCAGAACCCGCCCCACAACCAAACATTCAGATGCTTGGATCAATTCCGAAGTaGAGCTTGCCGTCCTTGGCG +
Preference number: 4 (lower is better)
Translates to: GISLIASEPAPQPNIQMLGSIPK*SLPSLA
Trigger: CGCCAAGGACGGCAAGCTGCACTTCGGAATTGATCC...AAGCATCTGAATGTTTGGTTGTGGGGCGGGTTCTGAAGCGATGAGAGAAATGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301776.9
ENST00000415229.6
ENST00000628829.2
CDS-3UTR GCA 90 bp TACGGGCATTTCTCTCATCGCTTCAGAACCCGCCCCACAACCAAACATTCAGATGGATCAATTCCGAAGTaGAGCTTGCCGTCCTTGGCG +
Preference number: 4 (lower is better)
Translates to: YGHFSHRFRTRPTTKHSDGSIPK*SLPSLA
Trigger: CGCCAAGGACGGCAAGCTGCACTTCGGAATTGATCC...ATCTGAATGTTTGGTTGTGGGGCGGGTTCTGAAGCGATGAGAGAAATGCCCGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301776.9
ENST00000415229.6
ENST00000628829.2
CDS-3UTR GCA 90 bp CTCTCTGTTGTTGGAGAGGCCCTGAGCCCCATTACTCACTATACGAGGACCAGATCCCTGATGTTCTTGTaGAACGTTCTGAGGGTCACC +
Preference number: 4 (lower is better)
Translates to: LSVVGEALSPITHYTRTRSLMFL*NVLRVT
Trigger: GGTGACCCTCAGAACGTTGCACAAGAACATCAGGGA...TCTGGTCCTCGTATAGTGAGTAATGGGGCTCAGGGCCTCTCCAACAACAGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
CDS-3UTR TCA 90 bp GCATTTCTCTCATCGCTTCAGAACCCGCCCCACAACCAAACATTCAGATGCTTAGAGGGGGCTCCTCTGTaGACCCAAGAAACTTCAAGG +
Preference number: 4 (lower is better)
Translates to: AFLSSLQNPPHNQTFRCLEGAPL*TQETSR
Trigger: CCTTGAAGTTTCTTGGGTTCACAGAGGAGCCCCCTC...TAAGCATCTGAATGTTTGGTTGTGGGGCGGGTTCTGAAGCGATGAGAGAAATGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
CDS-3UTR TCA 90 bp GTTCTTTTCCCTGATGTTCTTGTGCAACGTTCTGAGGGTCACCTGGGCTTCGCCGACAGACTAAAACGTTaGGCACGGATGATACAGCAG +
Preference number: 4 (lower is better)
Translates to: VLFPDVLVQRSEGHLGFADRLKR*ARMIQQ
Trigger: CTGCTGTATCATCCGTGCTCAACGTTTTAGTCTGTC...GGCGAAGCCCAGGTGACCCTCAGAACGTTGCACAAGAACATCAGGGAAAAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
CDS-3UTR GCA 90 bp CCTTCCAGCCCACAGTGTCTGCAGGCTGTGGGTCTCCCACATCTGTCATGTCAGAAGTTTAATGGGATTTaGTATACACTGGACTGCGGA +
Preference number: 4 (lower is better)
Translates to: PSSPQCLQAVGLPHLSCQKFNGI*YTLDCG
Trigger: TCCGCAGTCCAGTGTATAGCAAATCCCATTAAACTT...CTGACATGACAGATGTGGGAGACCCACAGCCTGCAGACACTGTGGGCTGGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
CDS-3UTR GCA 90 bp CTGTACTTGACCTCTAAGCTAGCATCTGGAATACAATCTTCCAGCGGCTTAGGGAGGATGCTTTCCCCATaGCCTGTGGTTGAGACGGCT +
Preference number: 4 (lower is better)
Translates to: LYLTSKLASGIQSSSGLGRMLSP*PVVETA
Trigger: AGCCGTCTCAACCACAGGGCATGGGGAAAGCATCCT...CCCTAAGCCGCTGGAAGATTGTATTCCAGATGCTAGCTTAGAGGTCAAGTACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628829.2
CDS-3UTR GCA 90 bp GTCGGTGATAGTAGTATCGTCAGGATCAATTCCGAAGTGCAGCTTGCCGTCCTTGGTGGAGGTCCACTTTaGCACCCAGTCTCCTGTTTT +
Preference number: 4 (lower is better)
Translates to: VGDSSIVRINSEVQLAVLGGGPL*HPVSCF
Trigger: AAAACAGGAGACTGGGTGGCAAAGTGGACCTCCACC...AAGGACGGCAAGCTGCACTTCGGAATTGATCCTGACGATACTACTATCACCGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628829.2
CDS-3UTR GCA 90 bp TTCCCACCTTCCAGCCCACAGTGTCTGCAGGCTGTGGGTCTCCCACATCTGTCAGTCATGTCAGGATCATaGTGCTGCTTTCTTTCTTTT +
Preference number: 4 (lower is better)
Translates to: FPPSSPQCLQAVGLPHLSVMSGS*CCFLSF
Trigger: AAAAGAAAGAAAGCAGCAGCATGATCCTGACATGAC...TGACAGATGTGGGAGACCCACAGCCTGCAGACACTGTGGGCTGGAAGGTGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
CDS-3UTR GCA 90 bp TTGTCACTCCCAGACATCCTGGAGCTGCACCAAAAGCAGAAAGGGAACGCAGCAGGGAATGAGATGGCGTaGTTCCCCGTTAATGTAAAC +
Preference number: 4 (lower is better)
Translates to: LSLPDILELHQKQKGNAAGNEMA*FPVNVN
Trigger: GTTTACATTAACGGGGAAGCACGCCATCTCATTCCC...TGCTGCGTTCCCTTTCTGCTTTTGGTGCAGCTCCAGGATGTCTGGGAGTGACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534183.5
CDS-3UTR CCA 90 bp AGGCTGTGGGTCTCCCACATCTGTCATGTCAGGATCATGCTGCTGCTTTCTTTCGGATTTGCTATACACTaGACTGCGGACACTGCTCCT +
Preference number: 4 (lower is better)
Translates to: RLWVSHICHVRIMLLLSFGFAIH*TADTAP
Trigger: AGGAGCAGTGTCCGCAGTCCAGTGTATAGCAAATCC...GAAAGAAAGCAGCAGCATGATCCTGACATGACAGATGTGGGAGACCCACAGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
CDS-3UTR CCA 90 bp TTTTCCCTGATGTTCTTGTGCAACGTTCTGAGGGTCACCTGGGCTTCGCCCACCTCCCAGAGGGTCCTTTaGAAGTATCTAGAAATGTCC +
Preference number: 4 (lower is better)
Translates to: FSLMFLCNVLRVTWASPTSQRVL*KYLEMS
Trigger: GGACATTTCTAGATACTTCCAAAGGACCCTCTGGGA...GGTGGGCGAAGCCCAGGTGACCCTCAGAACGTTGCACAAGAACATCAGGGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
CDS-3UTR CCA 90 bp CCTGGGCTTCGCCCACCACTGCTTCTACTGCTGCTGTGTCACTTTCAAACAGCTTCCCAGAGGGTCCTTTaGAAGTATCTAGAAATGTCC +
Preference number: 4 (lower is better)
Translates to: PGLRPPLLLLLLCHFQTASQRVL*KYLEMS
Trigger: GGACATTTCTAGATACTTCCAAAGGACCCTCTGGGA...AGCTGTTTGAAAGTGACACAGCAGCAGTAGAAGCAGTGGTGGGCGAAGCCCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
CDS-3UTR TCA 90 bp CCTGGGCTTCGCCCACCACTGCTTCTACTGCTGCTGTGTCACTTTCAAACAGCTTCAGTCAGAAAGCAATaGGGTGTCTTTTCCATGACA +
Preference number: 4 (lower is better)
Translates to: PGLRPPLLLLLLCHFQTASVRKQ*GVFSMT
Trigger: TGTCATGGAAAAGACACCTCATTGCTTTCTGACTGA...AGCTGTTTGAAAGTGACACAGCAGCAGTAGAAGCAGTGGTGGGCGAAGCCCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
CDS-3UTR TCA 90 bp GTTCTTTTCCCTGATGTTCTTGTGCAACGTTCTGAGGGTCACCTGGGCTTCGCCTCTGGTTCTTTTCCCTaGTGTTCTTGTGCAACGTTC +
Preference number: 4 (lower is better)
Translates to: VLFPDVLVQRSEGHLGFASGSFP*CSCATF
Trigger: GAACGTTGCACAAGAACATCAGGGAAAAGAACCAGA...GGCGAAGCCCAGGTGACCCTCAGAACGTTGCACAAGAACATCAGGGAAAAGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
CDS-3UTR TCA 90 bp AGGAATACTGCCCACCGAGGAAATGACTTTCTTCACCATGCTGACCACACTGCATTGTTGGAGAGGCCCTaGGCCCCATTACTCACTATA +
Preference number: 4 (lower is better)
Translates to: RNTAHRGNDFLHHADHTALLERP*APLLTI
Trigger: TATAGTGAGTAATGGGGCTCAGGGCCTCTCCAACAA...TGCAGTGTGGTCAGCATGGTGAAGAAAGTCATTTCCTCGGTGGGCAGTATTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
CDS-3UTR GCA 90 bp CTCATCGCTTCAGAACCCGCCCCACAACCAAACATTCAGATGCTTATTAAGGCATGCGGACACTGCTCCTaGAGACAGGTCTTTTCCATC +
Preference number: 4 (lower is better)
Translates to: LIASEPAPQPNIQMLIKACGHCS*RQVFSI
Trigger: GATGGAAAAGACCTGTCTGCAGGAGCAGTGTCCGCA...TGCCTTAATAAGCATCTGAATGTTTGGTTGTGGGGCGGGTTCTGAAGCGATGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
CDS-3UTR GCA 90 bp TCAGCTCCTCTCTGTTGTTGGAGAGGCCCTGAGCCCCATTACTCACTATACGAGCACTGCTTCTACTGCTaGTGTGTCACTTTCAAACAG +
Preference number: 4 (lower is better)
Translates to: SAPLCCWRGPEPHYSLYEHCFYC*CVTFKQ
Trigger: CTGTTTGAAAGTGACACAGCAGCAGTAGAAGCAGTG...CTCGTATAGTGAGTAATGGGGCTCAGGGCCTCTCCAACAACAGAGAGGAGCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
CDS-3UTR GCA 90 bp GCAACGTTAGCATCCCTGTCTCCACTTCTCTCCCCAAGTTGTTCCAAAAAGGCACAGACATCCTGGAGCTaGACCAAAAGCAGAAAGGGA +
Preference number: 4 (lower is better)
Translates to: ATLASLSPLLSPSCSKKAQTSWS*TKSRKG
Trigger: TCCCTTTCTGCTTTTGGTGCAGCTCCAGGATGTCTG...TGCCTTTTTGGAACAACTTGGGGAGAGAAGTGGAGACAGGGATGCTAACGTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000534183.5
CDS-3UTR CCA 90 bp TTGATTAGGCTATGTCTCATGAGGAGACTGTACTTGACCTCTAAGCTAGCATCTGTTCTGAGGGTCACCTaGGCTTCGCCCACCACTGCT +
Preference number: 4 (lower is better)
Translates to: LIRLCLMRRLYLTSKLASVLRVT*ASPTTA
Trigger: AGCAGTGGTGGGCGAAGCCCAGGTGACCCTCAGAAC...AGATGCTAGCTTAGAGGTCAAGTACAGTCTCCTCATGAGACATAGCCTAATCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
CDS-3UTR CCA 90 bp GCTTCAGAACCCGCCCCACAACCAAACATTCAGATGCTTATTAAGGCAACAAAAGGACCAGAGTGTCTTTaGCAGGTGGAGGCTGGCTCA +
Preference number: 4 (lower is better)
Translates to: ASEPAPQPNIQMLIKATKGPECL*QVEAGS
Trigger: TGAGCCAGCCTCCACCTGCCAAAGACACTCTGGTCC...TTTTGTTGCCTTAATAAGCATCTGAATGTTTGGTTGTGGGGCGGGTTCTGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
3UTR CAA 72 bp TTCCTTAAAGGATTCTGGTTCTTTTCCCTGATGTTCTaGTGCAACGTTCTGAGGGTCACCTGGGCTTCGCCC +
Preference number: 4 (lower is better)
Translates to: FLKGFWFFSLMF*CNVLRVTWASP
Trigger: GGGCGAAGCCCAGGTGACCCTCAGAACGTTGCACAAGAACATCAGGGAAAAGAACCAGAATCCTTTAAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
CDS-3UTR TCA 90 bp GTTGTTGGAGAGGCCCTGAGCCCCATTACTCACTATACGAGGACCAGAGTGTCTTCAGTCAGAAAGCAATaGGGTGTCTTTTCCATGACA +
Preference number: 4 (lower is better)
Translates to: VVGEALSPITHYTRTRVSSVRKQ*GVFSMT
Trigger: TGTCATGGAAAAGACACCTCATTGCTTTCTGACTGA...AGACACTCTGGTCCTCGTATAGTGAGTAATGGGGCTCAGGGCCTCTCCAACAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
CDS-3UTR TCA 90 bp TCAGCTCCTCTCTGTTGTTGGAGAGGCCCTGAGCCCCATTACTCACTATACGAGAGGCAACAAAACAAGTaGCAGACGGGACAATTTTTC +
Preference number: 4 (lower is better)
Translates to: SAPLCCWRGPEPHYSLYERQQNK*QTGQFF
Trigger: GAAAAATTGTCCCGTCTGTCACTTGTTTTGTTGCCT...CTCGTATAGTGAGTAATGGGGCTCAGGGCCTCTCCAACAACAGAGAGGAGCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
CDS-3UTR TCA 90 bp TTGATTAGGCTATGTCTCATGAGGAGACTGTACTTGACCTCTAAGCTAGCATCTTCTTGTGCAACGTTCTaGGGGTCACCTGGGCTTCGC +
Preference number: 4 (lower is better)
Translates to: LIRLCLMRRLYLTSKLASSCATF*GSPGLR
Trigger: GCGAAGCCCAGGTGACCCTCAGAACGTTGCACAAGA...AGATGCTAGCTTAGAGGTCAAGTACAGTCTCCTCATGAGACATAGCCTAATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
CDS-3UTR TCA 90 bp CCTGGGCTTCGCCCACCACTGCTTCTACTGCTGCTGTGTCACTTTCAAACAGCTAACGTTGAGCACGGATaGTACAGCAGAAATAACATT +
Preference number: 4 (lower is better)
Translates to: PGLRPPLLLLLLCHFQTANVEHG*YSRNNI
Trigger: AATGTTATTTCTGCTGTATCATCCGTGCTCAACGTT...AGCTGTTTGAAAGTGACACAGCAGCAGTAGAAGCAGTGGTGGGCGAAGCCCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
CDS-3UTR TCA 90 bp TGTTTTCCTGCTGACCCTCTCCTCTCTATTAACTTATTGTCCTGCCACATCCCCGAAGCTTCCTTCTGCTaGAGCAGCAGCAACTGGAAT +
Preference number: 4 (lower is better)
Translates to: CFPADPLLSINLLSCHIPEASFC*SSSNWN
Trigger: ATTCCAGTTGCTGCTGCTTCAGCAGAAGGAAGCTTC...GGGGATGTGGCAGGACAATAAGTTAATAGAGAGGAGAGGGTCAGCAGGAAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528206.1
CDS-3UTR GCA 90 bp CTCATCGCTTCAGAACCCGCCCCACAACCAAACATTCAGATGCTTATTAAGGCAAGGCTACATTCCCTTTaGAGTCCAAGGCAACAGCAC +
Preference number: 4 (lower is better)
Translates to: LIASEPAPQPNIQMLIKARLHSL*SPRQQH
Trigger: GTGCTGTTGCCTTGGACTGCAAAGGGAATGTAGCCT...TGCCTTAATAAGCATCTGAATGTTTGGTTGTGGGGCGGGTTCTGAAGCGATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301776.9
ENST00000415229.6
ENST00000628829.2
CDS-3UTR GCA 90 bp GCATCCCTGTCTCCACTTCTCTCCCCAAGTTGTTCCAAAAAGGCATGCAATCTAAGGCTACATTCCCTTTaGAGTCCAAGGCAACAGCAC +
Preference number: 4 (lower is better)
Translates to: ASLSPLLSPSCSKKACNLRLHSL*SPRQQH
Trigger: GTGCTGTTGCCTTGGACTGCAAAGGGAATGTAGCCT...TAGATTGCATGCCTTTTTGGAACAACTTGGGGAGAGAAGTGGAGACAGGGATGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534183.5
CDS-3UTR GCA 90 bp CACCGCACCCAGCCTCTTATTTCTTTTCTCAGTCTCTCGTCCCACCTGATGAGAAGAGGAAGGCCTCTTTaGAGTTGTGATAAGAGGAAG +
Preference number: 4 (lower is better)
Translates to: HRTQPLISFLSLSSHLMRRGRPL*SCDKRK
Trigger: CTTCCTCTTATCACAACTGCAAAGAGGCCTTCCTCT...TCTCATCAGGTGGGACGAGAGACTGAGAAAAGAAATAAGAGGCTGGGTGCGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528206.1
CDS-3UTR GCA 90 bp CCCTGCCTCTCACCCACTCCTGGGAATGAGATGGCGTGCTTCCCCGTTAATGTAAGTATGTCACTTTCATaGTGCTCAGATCTAACAACT +
Preference number: 4 (lower is better)
Translates to: PCLSPTPGNEMACFPVNVSMSLS*CSDLTT
Trigger: AGTTGTTAGATCTGAGCAGCATGAAAGTGACATACT...TACATTAACGGGGAAGCACGCCATCTCATTCCCAGGAGTGGGTGAGAGGCAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534183.5
CDS-3UTR CCA 90 bp GCATTTCTCTCATCGCTTCAGAACCCGCCCCACAACCAAACATTCAGATGCTTAGGATTTGCTATACACTaGACTGCGGACACTGCTCCT +
Preference number: 4 (lower is better)
Translates to: AFLSSLQNPPHNQTFRCLGFAIH*TADTAP
Trigger: AGGAGCAGTGTCCGCAGTCCAGTGTATAGCAAATCC...TAAGCATCTGAATGTTTGGTTGTGGGGCGGGTTCTGAAGCGATGAGAGAAATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
CDS-3UTR CCA 90 bp GCCCACAGTGTCTGCAGGCTGTGGGTCTCCCACATCTGTCATGTCAGGATCATGTTCCTTAAAGGATTCTaGTTCTTTTCCCTGATGTTC +
Preference number: 4 (lower is better)
Translates to: AHSVCRLWVSHICHVRIMFLKGF*FFSLMF
Trigger: GAACATCAGGGAAAAGAACCAGAATCCTTTAAGGAA...CATGATCCTGACATGACAGATGTGGGAGACCCACAGCCTGCAGACACTGTGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
CDS-3UTR GCA 90 bp TTGATTAGGCTATGTCTCATGAGGAGACTGTACTTGACCTCTAAGCTAGCATCTATAGCTGCTGCAAACTaGGCTGCGCCTTGGTCAGTC +
Preference number: 4 (lower is better)
Translates to: LIRLCLMRRLYLTSKLASIAAAN*AAPWSV
Trigger: GACTGACCAAGGCGCAGCGCAGTTTGCAGCAGCTAT...AGATGCTAGCTTAGAGGTCAAGTACAGTCTCCTCATGAGACATAGCCTAATCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301776.9
ENST00000415229.6
ENST00000628829.2
CDS-3UTR GCA 90 bp TACTTGACCTCTAAGCTAGCATCTGGAATACAATCTTCCAGCGGCTTAGGGAAGAGGCTACATTCCCTTTaGAGTCCAAGGCAACAGCAC +
Preference number: 4 (lower is better)
Translates to: YLTSKLASGIQSSSGLGKRLHSL*SPRQQH
Trigger: GTGCTGTTGCCTTGGACTGCAAAGGGAATGTAGCCT...CTTCCCTAAGCCGCTGGAAGATTGTATTCCAGATGCTAGCTTAGAGGTCAAGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628829.2
CDS-3UTR GCA 90 bp TACGGGCATTTCTCTCATCGCTTCAGAACCCGCCCCACAACCAAACATTCAGATCACTGCTTCTACTGCTaGTGTGTCACTTTCAAACAG +
Preference number: 4 (lower is better)
Translates to: YGHFSHRFRTRPTTKHSDHCFYC*CVTFKQ
Trigger: CTGTTTGAAAGTGACACAGCAGCAGTAGAAGCAGTG...ATCTGAATGTTTGGTTGTGGGGCGGGTTCTGAAGCGATGAGAGAAATGCCCGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
CDS-3UTR CCA 90 bp GCTTCAGAACCCGCCCCACAACCAAACATTCAGATGCTTATTAAGGCAACAAAAAGTGTCTGCAGGCTGTaGGTCTCCCACATCTGTCAT +
Preference number: 4 (lower is better)
Translates to: ASEPAPQPNIQMLIKATKSVCRL*VSHICH
Trigger: ATGACAGATGTGGGAGACCCACAGCCTGCAGACACT...TTTTGTTGCCTTAATAAGCATCTGAATGTTTGGTTGTGGGGCGGGTTCTGAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
CDS-3UTR GCA 90 bp AACATTCAGATGCTTATTAAGGCAACAAAACAAGTGACAGACGGGACAATTTTTCCAGCCCACAGTGTCTaGAGGCTGTGGGTCTCCCAC +
Preference number: 4 (lower is better)
Translates to: NIQMLIKATKQVTDGTIFPAHSV*RLWVSH
Trigger: GTGGGAGACCCACAGCCTGCAGACACTGTGGGCTGG...AAAAATTGTCCCGTCTGTCACTTGTTTTGTTGCCTTAATAAGCATCTGAATGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
CDS-3UTR GCA 90 bp GGCAACGTTAGCATCCCTGTCTCCACTTCTCTCCCCAAGTTGTTCCAAAAAGGCATGTCACTTTCATGCTaGTCAGATCTAACAACTGCA +
Preference number: 4 (lower is better)
Translates to: GNVSIPVSTSLPKLFQKGMSLSC*SDLTTA
Trigger: TGCAGTTGTTAGATCTGAGCAGCATGAAAGTGACAT...GCCTTTTTGGAACAACTTGGGGAGAGAAGTGGAGACAGGGATGCTAACGTTGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534183.5
CDS-3UTR CCA 90 bp CTCATCGCTTCAGAACCCGCCCCACAACCAAACATTCAGATGCTTATTAAGGCATTTCCTTGTTCTATGTaGAACAGGGTGAGTCTAGCC +
Preference number: 4 (lower is better)
Translates to: LIASEPAPQPNIQMLIKAFPCSM*NRVSLA
Trigger: GGCTAGACTCACCCTGTTCCACATAGAACAAGGAAA...TGCCTTAATAAGCATCTGAATGTTTGGTTGTGGGGCGGGTTCTGAAGCGATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301776.9
ENST00000415229.6
ENST00000628829.2
CDS-3UTR CCA 90 bp TTTTCCCTGATGTTCTTGTGCAACGTTCTGAGGGTCACCTGGGCTTCGCCCACCTTTATTAGCGGCACATaGAATGTCAAGTTAAGCAAA +
Preference number: 4 (lower is better)
Translates to: FSLMFLCNVLRVTWASPTFISGT*NVKLSK
Trigger: TTTGCTTAACTTGACATTCCATGTGCCGCTAATAAA...GGTGGGCGAAGCCCAGGTGACCCTCAGAACGTTGCACAAGAACATCAGGGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
3UTR CAA 72 bp TGCAGTTGTGATAAGAGGAAGGCATCTGTCTCCTGCTaGTCCCTGGGCAATAGAATGTCTGGGTTTAAAACC +
Preference number: 4 (lower is better)
Translates to: CSCDKRKASVSC*SLGNRMSGFKT
Trigger: GGTTTTAAACCCAGACATTCTATTGCCCAGGGACAAGCAGGAGACAGATGCCTTCCTCTTATCACAACTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528206.1
CDS-3UTR TCA 90 bp CTCATCGCTTCAGAACCCGCCCCACAACCAAACATTCAGATGCTTATTAAGGCAAGGCAACAAAACAAGTaGCAGACGGGACAATTTTTC +
Preference number: 4 (lower is better)
Translates to: LIASEPAPQPNIQMLIKARQQNK*QTGQFF
Trigger: GAAAAATTGTCCCGTCTGTCACTTGTTTTGTTGCCT...TGCCTTAATAAGCATCTGAATGTTTGGTTGTGGGGCGGGTTCTGAAGCGATGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301776.9
ENST00000415229.6
ENST00000628829.2
CDS-3UTR GCA 90 bp GGCATTTCTCTCATCGCTTCAGAACCCGCCCCACAACCAAACATTCAGATGCTTAAGTTTAATGGGATTTaGTATACACTGGACTGCGGA +
Preference number: 4 (lower is better)
Translates to: GISLIASEPAPQPNIQMLKFNGI*YTLDCG
Trigger: TCCGCAGTCCAGTGTATAGCAAATCCCATTAAACTT...AAGCATCTGAATGTTTGGTTGTGGGGCGGGTTCTGAAGCGATGAGAGAAATGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
CDS-3UTR GCA 90 bp ATGGAATGTCAAGTTAAGCAAATTCTTTCCAGAGAGAAGGTGAGCCTGACAGACTCCCTGATGTTCTTGTaGAACGTTCTGAGGGTCACC +
Preference number: 4 (lower is better)
Translates to: MECQVKQILSREKVSLTDSLMFL*NVLRVT
Trigger: GGTGACCCTCAGAACGTTGCACAAGAACATCAGGGA...GTCTGTCAGGCTCACCTTCTCTCTGGAAAGAATTTGCTTAACTTGACATTCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
CDS-3UTR GCA 90 bp GACCTCTGCCTAGGAAAGCCAGGTATTGTCCAAGGTTTCTCCCCATGTGATAGCTGCTTGAAGGCAGTATaGTTGTTAAAAGTCATTACC +
Preference number: 4 (lower is better)
Translates to: DLCLGKPGIVQGFSPCDSCLKAV*LLKVIT
Trigger: GGTAATGACTTTTAACAAGCATACTGCCTTCAAGCA...GCTATCACATGGGGAGAAACCTTGGACAATACCTGGCTTTCCTAGGCAGAGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528206.1
CDS-3UTR CCA 90 bp AGGCTGTGGGTCTCCCACATCTGTCATGTCAGGATCATGCTGCTGCTTTCTTTCTTCCTTAAAGGATTCTaGTTCTTTTCCCTGATGTTC +
Preference number: 4 (lower is better)
Translates to: RLWVSHICHVRIMLLLSFFLKGF*FFSLMF
Trigger: GAACATCAGGGAAAAGAACCAGAATCCTTTAAGGAA...GAAAGAAAGCAGCAGCATGATCCTGACATGACAGATGTGGGAGACCCACAGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
CDS-3UTR CCA 90 bp CACCGCACCCAGCCTCTTATTTCTTTTCTCAGTCTCTCGTCCCACCTGATGAGATACTATATGGATTTGTaGGGAAACGAAAGAGATCAG +
Preference number: 4 (lower is better)
Translates to: HRTQPLISFLSLSSHLMRYYMDL*GNERDQ
Trigger: CTGATCTCTTTCGTTTCCCCACAAATCCATATAGTA...TCTCATCAGGTGGGACGAGAGACTGAGAAAAGAAATAAGAGGCTGGGTGCGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528206.1
CDS-3UTR CCA 90 bp CCTCTTTGCAGTTGTGATAAGAGGAAGGCATCTGTCTCCTGCTTGTCCCTGGGCCACTCAAATACTATATaGATTTGTGGGGAAACGAAA +
Preference number: 4 (lower is better)
Translates to: PLCSCDKRKASVSCLSLGHSNTI*ICGETK
Trigger: TTTCGTTTCCCCACAAATCCATATAGTATTTGAGTG...GCCCAGGGACAAGCAGGAGACAGATGCCTTCCTCTTATCACAACTGCAAAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528206.1
CDS-3UTR TCA 90 bp AATGAGATGGCGTGCTTCCCCGTTAATGTAAACAACATCTCAATCTATAATGTGATGAGGTGTCTGCGTTaGACTCGGGATCGTCTTCCA +
Preference number: 4 (lower is better)
Translates to: NEMACFPVNVNNISIYNVMRCLR*TRDRLP
Trigger: TGGAAGACGATCCCGAGTTCAACGCAGACACCTCAT...CACATTATAGATTGAGATGTTGTTTACATTAACGGGGAAGCACGCCATCTCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534183.5
CDS-3UTR CCA 90 bp GCTTCAGAACCCGCCCCACAACCAAACATTCAGATGCTTATTAAGGCAACAAAACAGATTAGGAAGCTATaGATTCCCAGAGGGTCCTTT +
Preference number: 4 (lower is better)
Translates to: ASEPAPQPNIQMLIKATKQIRKL*IPRGSF
Trigger: AAAGGACCCTCTGGGAATCCATAGCTTCCTAATCTG...TTTTGTTGCCTTAATAAGCATCTGAATGTTTGGTTGTGGGGCGGGTTCTGAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
CDS-3UTR CCA 90 bp AATGAGATGGCGTGCTTCCCCGTTAATGTAAACAACATCTCAATCTATAATGTGCTCCTGGGAATGAGATaGCGTGCTTCCCCGTTAATG +
Preference number: 4 (lower is better)
Translates to: NEMACFPVNVNNISIYNVLLGMR*RASPLM
Trigger: CATTAACGGGGAAGCACGCCATCTCATTCCCAGGAG...CACATTATAGATTGAGATGTTGTTTACATTAACGGGGAAGCACGCCATCTCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534183.5
3UTR CAA 72 bp TCCAGATTAGGAAGCTATGGATTCCCAGAGGGTCCTTaGGAAGTATCTAGAAATGTCCAGGTAAGTCAGAGA +
Preference number: 4 (lower is better)
Translates to: SRLGSYGFPEGP*EVSRNVQVSQR
Trigger: TCTCTGACTTACCTGGACATTTCTAGATACTTCCAAAGGACCCTCTGGGAATCCATAGCTTCCTAATCTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
3UTR CAA 72 bp CTCAGATCTAACAACTGCAGTCTCAGATTTCTCAGATaGCTAATCAGAGCCCATGTCTCGGGAGTAAGTCTT +
Preference number: 4 (lower is better)
Translates to: LRSNNCSLRFLR*LIRAHVSGVSL
Trigger: AAGACTTACTCCCGAGACATGGGCTCTGATTAGCAATCTGAGAAATCTGAGACTGCAGTTGTTAGATCTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534183.5
CDS-3UTR GCA 90 bp AACATTCAGATGCTTATTAAGGCAACAAAACAAGTGACAGACGGGACAATTTTTGACAGACCCACAACCTaGGTTGAACTCGGGATCGTC +
Preference number: 4 (lower is better)
Translates to: NIQMLIKATKQVTDGTIFDRPTT*VELGIV
Trigger: GACGATCCCGAGTTCAACGCAGGTTGTGGGTCTGTC...AAAAATTGTCCCGTCTGTCACTTGTTTTGTTGCCTTAATAAGCATCTGAATGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
CDS-3UTR CCA 90 bp AACATTCAGATGCTTATTAAGGCAACAAAACAAGTGACAGACGGGACAATTTTTTTTCCCCATGCCCTGTaGTTGAGACGGCTCCGATGT +
Preference number: 4 (lower is better)
Translates to: NIQMLIKATKQVTDGTIFFPHAL*LRRLRC
Trigger: ACATCGGAGCCGTCTCAACCACAGGGCATGGGGAAA...AAAAATTGTCCCGTCTGTCACTTGTTTTGTTGCCTTAATAAGCATCTGAATGTT
43% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000301776.9
ENST00000415229.6
ENST00000628829.2
CDS-3UTR TCA 90 bp GCTTCAGAACCCGCCCCACAACCAAACATTCAGATGCTTATTAAGGCAACAAAAAACGTTGAGCACGGATaGTACAGCAGAAATAACATT +
Preference number: 4 (lower is better)
Translates to: ASEPAPQPNIQMLIKATKNVEHG*YSRNNI
Trigger: AATGTTATTTCTGCTGTATCATCCGTGCTCAACGTT...TTTTGTTGCCTTAATAAGCATCTGAATGTTTGGTTGTGGGGCGGGTTCTGAAGC
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
CDS-3UTR CCA 90 bp CTCATCGCTTCAGAACCCGCCCCACAACCAAACATTCAGATGCTTATTAAGGCATTTATTAGCGGCACATaGAATGTCAAGTTAAGCAAA +
Preference number: 4 (lower is better)
Translates to: LIASEPAPQPNIQMLIKAFISGT*NVKLSK
Trigger: TTTGCTTAACTTGACATTCCATGTGCCGCTAATAAA...TGCCTTAATAAGCATCTGAATGTTTGGTTGTGGGGCGGGTTCTGAAGCGATGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
CDS-3UTR CCA 90 bp AACATTCAGATGCTTATTAAGGCAACAAAACAAGTGACAGACGGGACAATTTTTTTTCCTTGTTCTATGTaGAACAGGGTGAGTCTAGCC +
Preference number: 4 (lower is better)
Translates to: NIQMLIKATKQVTDGTIFFPCSM*NRVSLA
Trigger: GGCTAGACTCACCCTGTTCCACATAGAACAAGGAAA...AAAAATTGTCCCGTCTGTCACTTGTTTTGTTGCCTTAATAAGCATCTGAATGTT
39% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301776.9
ENST00000415229.6
ENST00000628829.2
CDS CCA 90 bp GCGGATCCCAGGGCACCGCAGGACGCGGACGCCGAGACCTCAAGCTaGGTCGAGCCAGCCCCGCAGCCGCCCGGTACCGCCGCTCCCCGA +
Preference number: 5 (lower is better)
Translates to: ADPRAPQDADAETSS*VEPAPQPPGTAAPR
Trigger: TCGGGGAGCGGCGGTACCGGGCGGCTGCGGGGCTGGCTCGACCCAGCTTGAGGTCTCGGCGTCCGCGTCCTGCGGTGCCCTGGGATCCGC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000534183.5
CDS TCA 90 bp CGCTCCCGCCCTCCCGGAGGATGCCGTAGCCCACGGTGGCGGCTCTaGCCATGCCCTGGTGCACTCGCTCCTTCCGATCCTTGGAGATGG +
Preference number: 5 (lower is better)
Translates to: RSRPPGGCRSPRWRL*PCPGALAPSDPWRW
Trigger: CCATCTCCAAGGATCGGAAGGAGCGAGTGCACCAGGGCATGGTCAGAGCCGCCACCGTGGGCTACGGCATCCTCCGGGAGGGCGGGAGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000301776.9
ENST00000415229.6
ENST00000525496.1
ENST00000526096.2
ENST00000529226.3
ENST00000534183.5
ENST00000534571.5
ENST00000628829.2
CDS CCA 90 bp ACTCGCTCCTTCCGATCCTTGGAGATGGGACCGGCTCCGCCGCCGTaGACCACTACGATGGGATTCATGTCGGCGGATCCCAGGGCACCG +
Preference number: 5 (lower is better)
Translates to: TRSFRSLEMGPAPPP*TTTMGFMSADPRAP
Trigger: CGGTGCCCTGGGATCCGCCGACATGAATCCCATCGTAGTGGTCCACGGCGGCGGAGCCGGTCCCATCTCCAAGGATCGGAAGGAGCGAGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301776.9
ENST00000534183.5
ENST00000534571.5
ENST00000628829.2
CDS CCA 90 bp GATCCTTGGAGATGGGACCGGCTCCGCCGCCGTGGACCACTACGATaGGATTCATGTCGGCGGATCCTAGGCAGCAGGAAGGCGAAAGCG +
Preference number: 5 (lower is better)
Translates to: DPWRWDRLRRRGPLR*DSCRRILGSRKAKA
Trigger: CGCTTTCGCCTTCCTGCTGCCTAGGATCCGCCGACATGAATCCCATCGTAGTGGTCCACGGCGGCGGAGCCGGTCCCATCTCCAAGGATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415229.6
ENST00000525496.1
ENST00000529226.3
CDS CCA 90 bp ACTCGCTCCTTCCGATCCTTGGAGATGGGACCGGCTCCGCCGCCGTaGACCACTACGATGGGATTCATGTCGGCGGATCCTAGGCAGCAG +
Preference number: 5 (lower is better)
Translates to: TRSFRSLEMGPAPPP*TTTMGFMSADPRQQ
Trigger: CTGCTGCCTAGGATCCGCCGACATGAATCCCATCGTAGTGGTCCACGGCGGCGGAGCCGGTCCCATCTCCAAGGATCGGAAGGAGCGAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415229.6
ENST00000525496.1
ENST00000529226.3
CDS-3UTR CAA 90 bp GCCCACAGTGTCTGCAGGCTGTGGGTCTCCCACATCTGTCATGTCAGGATCATGCGCTCCTTCCGATCCTaGGAGATGGGACCGGCTCCG +
Preference number: 5 (lower is better)
Translates to: AHSVCRLWVSHICHVRIMRSFRS*EMGPAP
Trigger: CGGAGCCGGTCCCATCTCCAAGGATCGGAAGGAGCG...CATGATCCTGACATGACAGATGTGGGAGACCCACAGCCTGCAGACACTGTGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
CDS-3UTR CAA 90 bp CCTTCCAGCCCACAGTGTCTGCAGGCTGTGGGTCTCCCACATCTGTCATGTCAGATTCCGAAGTGCAGCTaGCCGTCCTTGGCGGCTGCC +
Preference number: 5 (lower is better)
Translates to: PSSPQCLQAVGLPHLSCQIPKCS*PSLAAA
Trigger: GGCAGCCGCCAAGGACGGCAAGCTGCACTTCGGAAT...CTGACATGACAGATGTGGGAGACCCACAGCCTGCAGACACTGTGGGCTGGAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
CDS-3UTR CAA 90 bp CCTTCCAGCCCACAGTGTCTGCAGGCTGTGGGTCTCCCACATCTGTCATGTCAGCCCCATGCCCTGTGGTaGAGACGGCTCCGATGTCAT +
Preference number: 5 (lower is better)
Translates to: PSSPQCLQAVGLPHLSCQPHALW*RRLRCH
Trigger: ATGACATCGGAGCCGTCTCAACCACAGGGCATGGGG...CTGACATGACAGATGTGGGAGACCCACAGCCTGCAGACACTGTGGGCTGGAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
CDS-3UTR CAA 90 bp CGAAGTGCAGCTTGCCGTCCTTGGCGGCTGCCCAGGGCATGGAGGTGGAGGTCCTTCTACCGTCTTTCCTaGTTCTATGTGGAACAGGGT +
Preference number: 5 (lower is better)
Translates to: RSAACRPWRLPRAWRWRSFYRLS*FYVEQG
Trigger: ACCCTGTTCCACATAGAACAAGGAAAGACGGTAGAA...GGACCTCCACCTCCATGCCCTGGGCAGCCGCCAAGGACGGCAAGCTGCACTTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628829.2
CDS-3UTR CAA 90 bp GTGATAGTAGTATCGTCAGGATCAATTCCGAAGTGCAGCTTGCCGTCCTTGGCGTGCAGCTTGCCGTCCTaGGCGGCTGCCCAGGGCATG +
Preference number: 5 (lower is better)
Translates to: VIVVSSGSIPKCSLPSLACSLPS*AAAQGM
Trigger: CATGCCCTGGGCAGCCGCCAAGGACGGCAAGCTGCA...CGCCAAGGACGGCAAGCTGCACTTCGGAATTGATCCTGACGATACTACTATCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628829.2
CDS-3UTR CAA 90 bp GCCCACAGGTGTAGAGGGGCTGGCCACCCCTTCATCTGGTGCCCAACGTGGGTGCTCTCTATTAACTTATaGTCCTGCCACATCCCCCTC +
Preference number: 5 (lower is better)
Translates to: AHRCRGAGHPFIWCPTWVLSINL*SCHIPL
Trigger: GAGGGGGATGTGGCAGGACAATAAGTTAATAGAGAG...CACCCACGTTGGGCACCAGATGAAGGGGTGGCCAGCCCCTCTACACCTGTGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000528206.1
CDS-3UTR CAA 90 bp CTTGCCGTCCTTGGCGGCTGCCCAGGGCATGGAGGTGGAGGTCCACTTTGCCACTTTTCCAGGCGCTTTTaGTTTCTCTCTGTCACCAGT +
Preference number: 5 (lower is better)
Translates to: LAVLGGCPGHGGGGPLCHFSRRF*FLSVTS
Trigger: ACTGGTGACAGAGAGAAACAAAAAGCGCCTGGAAAA...GTGGCAAAGTGGACCTCCACCTCCATGCCCTGGGCAGCCGCCAAGGACGGCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628829.2
CDS-3UTR CAA 90 bp GAGGTGGAGGTCCACTTTGCCACCCAGTCTCCTGTTTTGCTAACCACGATGAGGCCCCATGCCCTGTGGTaGAGACGGCTCCGATGTCAT +
Preference number: 5 (lower is better)
Translates to: EVEVHFATQSPVLLTTMRPHALW*RRLRCH
Trigger: ATGACATCGGAGCCGTCTCAACCACAGGGCATGGGG...CCTCATCGTGGTTAGCAAAACAGGAGACTGGGTGGCAAAGTGGACCTCCACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628829.2
CDS-3UTR CAA 90 bp TACGGGCATTTCTCTCATCGCTTCAGAACCCGCCCCACAACCAAACATTCAGATTGCAGCTTGCCGTCCTaGGCGGCTGCCCAGGGCATG +
Preference number: 5 (lower is better)
Translates to: YGHFSHRFRTRPTTKHSDCSLPS*AAAQGM
Trigger: CATGCCCTGGGCAGCCGCCAAGGACGGCAAGCTGCA...ATCTGAATGTTTGGTTGTGGGGCGGGTTCTGAAGCGATGAGAGAAATGCCCGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301776.9
ENST00000415229.6
ENST00000628829.2
CDS-3UTR CAA 90 bp CTCTCTGTTGTTGGAGAGGCCCTGAGCCCCATTACTCACTATACGAGGACCAGAATTCCGAAGTGCAGCTaGCCGTCCTTGGCGGCTGCC +
Preference number: 5 (lower is better)
Translates to: LSVVGEALSPITHYTRTRIPKCS*PSLAAA
Trigger: GGCAGCCGCCAAGGACGGCAAGCTGCACTTCGGAAT...TCTGGTCCTCGTATAGTGAGTAATGGGGCTCAGGGCCTCTCCAACAACAGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
CDS TCA 90 bp TCTAGCCAGGTTCACCTTCAGGATGCTTTCCCCATGCCCTGTGGTTaGGACGGCTCCGATGTCATTGTCGGCATAACCTCCAGCTCCTGC +
Preference number: 5 (lower is better)
Translates to: SSQVHLQDAFPMPCG*DGSDVIVGITSSSC
Trigger: GCAGGAGCTGGAGGTTATGCCGACAATGACATCGGAGCCGTCTCAACCACAGGGCATGGGGAAAGCATCCTGAAGGTGAACCTGGCTAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525708.1
CDS-3UTR CAA 90 bp GAGTCCCCAACGCGGCCGACCATTTTATTAACGATACCGCCTGTGGAGGTTGCGTACCGCCTGTGGAGGTaGCGTAGGCTACATTCCCTT +
Preference number: 5 (lower is better)
Translates to: ESPTRPTILLTIPPVEVAYRLWR*RRLHSL
Trigger: AAGGGAATGTAGCCTACGCAACCTCCACAGGCGGTA...CGCAACCTCCACAGGCGGTATCGTTAATAAAATGGTCGGCCGCGTTGGGGACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000534183.5
ENST00000628829.2
CDS-3UTR CAA 90 bp GCATTTCTCTCATCGCTTCAGAACCCGCCCCACAACCAAACATTCAGATGCTTATGCAGCTTGCCGTCCTaGGCGGCTGCCCAGGGCATG +
Preference number: 5 (lower is better)
Translates to: AFLSSLQNPPHNQTFRCLCSLPS*AAAQGM
Trigger: CATGCCCTGGGCAGCCGCCAAGGACGGCAAGCTGCA...TAAGCATCTGAATGTTTGGTTGTGGGGCGGGTTCTGAAGCGATGAGAGAAATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301776.9
ENST00000415229.6
ENST00000628829.2
CDS-3UTR CAA 90 bp GAGTCCCCAACGCGGCCGACCATTTTATTAACGATACCGCCTGTGGAGGTTGCGAAACTGCGCTGCGCCTaGGTCAGTCAGAAAGCAATG +
Preference number: 5 (lower is better)
Translates to: ESPTRPTILLTIPPVEVAKLRCA*VSQKAM
Trigger: CATTGCTTTCTGACTGACCAAGGCGCAGCGCAGTTT...CGCAACCTCCACAGGCGGTATCGTTAATAAAATGGTCGGCCGCGTTGGGGACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000534183.5
ENST00000628829.2
CDS-3UTR CAA 90 bp TTTTCCCTGATGTTCTTGTGCAACGTTCTGAGGGTCACCTGGGCTTCGCCCACCTACCGCCTGTGGAGGTaGCGTAGGCTACATTCCCTT +
Preference number: 5 (lower is better)
Translates to: FSLMFLCNVLRVTWASPTYRLWR*RRLHSL
Trigger: AAGGGAATGTAGCCTACGCAACCTCCACAGGCGGTA...GGTGGGCGAAGCCCAGGTGACCCTCAGAACGTTGCACAAGAACATCAGGGAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
CDS-3UTR CAA 90 bp GCTCAAGTAATCCTCCTAATACGGGCATTTCTCTCATCGCTTCAGAACCCGCCCCCCCATGCCCTGTGGTaGAGACGGCTCCGATGTCAT +
Preference number: 5 (lower is better)
Translates to: AQVILLIRAFLSSLQNPPPHALW*RRLRCH
Trigger: ATGACATCGGAGCCGTCTCAACCACAGGGCATGGGG...GGGCGGGTTCTGAAGCGATGAGAGAAATGCCCGTATTAGGAGGATTACTTGAGC
56% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000301776.9
ENST00000415229.6
ENST00000628829.2
CDS-3UTR CAA 90 bp AAGGCATGCAATCTAGTAAAAACAGTGGCGCCAGATACAAACACCCTCTCAAGGCGCTCCTTCCGATCCTaGGAGATGGGACCGGCTCCG +
Preference number: 5 (lower is better)
Translates to: KACNLVKTVAPDTNTLSRRSFRS*EMGPAP
Trigger: CGGAGCCGGTCCCATCTCCAAGGATCGGAAGGAGCG...CCTTGAGAGGGTGTTTGTATCTGGCGCCACTGTTTTTACTAGATTGCATGCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534183.5
CDS-3UTR CAA 90 bp TACTTGACCTCTAAGCTAGCATCTGGAATACAATCTTCCAGCGGCTTAGGGAAGCGCTCCTTCCGATCCTaGGAGATGGGACCGGCTCCG +
Preference number: 5 (lower is better)
Translates to: YLTSKLASGIQSSSGLGKRSFRS*EMGPAP
Trigger: CGGAGCCGGTCCCATCTCCAAGGATCGGAAGGAGCG...CTTCCCTAAGCCGCTGGAAGATTGTATTCCAGATGCTAGCTTAGAGGTCAAGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628829.2
CDS-3UTR CAA 90 bp CAGCTCCTCTCTGTTGTTGGAGAGGCCCTGAGCCCCATTACTCACTATACGAGGAAACTGCGCTGCGCCTaGGTCAGTCAGAAAGCAATG +
Preference number: 5 (lower is better)
Translates to: QLLSVVGEALSPITHYTRKLRCA*VSQKAM
Trigger: CATTGCTTTCTGACTGACCAAGGCGCAGCGCAGTTT...CCTCGTATAGTGAGTAATGGGGCTCAGGGCCTCTCCAACAACAGAGAGGAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
CDS-3UTR CAA 90 bp TTTTCCCTGATGTTCTTGTGCAACGTTCTGAGGGTCACCTGGGCTTCGCCCACCAAACTGCGCTGCGCCTaGGTCAGTCAGAAAGCAATG +
Preference number: 5 (lower is better)
Translates to: FSLMFLCNVLRVTWASPTKLRCA*VSQKAM
Trigger: CATTGCTTTCTGACTGACCAAGGCGCAGCGCAGTTT...GGTGGGCGAAGCCCAGGTGACCCTCAGAACGTTGCACAAGAACATCAGGGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
CDS-3UTR CAA 90 bp CTCTCTGTTGTTGGAGAGGCCCTGAGCCCCATTACTCACTATACGAGGACCAGATGGCTCACCTCAGCTTaGACCTCCTGGGCTCAAGTA +
Preference number: 5 (lower is better)
Translates to: LSVVGEALSPITHYTRTRWLTSA*TSWAQV
Trigger: TACTTGAGCCCAGGAGGTCAAAGCTGAGGTGAGCCA...TCTGGTCCTCGTATAGTGAGTAATGGGGCTCAGGGCCTCTCCAACAACAGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
CDS GCA 90 bp CTCTGTCACCAGTTTTTCTCCAGGAATCTCTGGAACCCCCATAGCTaGTGCAAACTGCGCTGCGCCTTGGTCAGTCAGAAAGCAATGAGG +
Preference number: 5 (lower is better)
Translates to: LCHQFFSRNLWNPHS*CKLRCALVSQKAMR
Trigger: CCTCATTGCTTTCTGACTGACCAAGGCGCAGCGCAGTTTGCAGCAGCTATGGGGGTTCCAGAGATTCCTGGAGAAAAACTGGTGACAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000301776.9
ENST00000415229.6
ENST00000526096.2
ENST00000529226.3
ENST00000534183.5
ENST00000534571.5
ENST00000628829.2
CDS-3UTR CAA 90 bp GCTCAAGTAATCCTCCTAATACGGGCATTTCTCTCATCGCTTCAGAACCCGCCCTACCGCCTGTGGAGGTaGCGTAGGCTACATTCCCTT +
Preference number: 5 (lower is better)
Translates to: AQVILLIRAFLSSLQNPPYRLWR*RRLHSL
Trigger: AAGGGAATGTAGCCTACGCAACCTCCACAGGCGGTA...GGGCGGGTTCTGAAGCGATGAGAGAAATGCCCGTATTAGGAGGATTACTTGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301776.9
ENST00000415229.6
ENST00000628829.2
CDS-3UTR CAA 90 bp AGGCTGTGGGTCTCCCACATCTGTCATGTCAGGATCATGCTGCTGCTTTCTTTCTGGCTCACCTCAGCTTaGACCTCCTGGGCTCAAGTA +
Preference number: 5 (lower is better)
Translates to: RLWVSHICHVRIMLLLSFWLTSA*TSWAQV
Trigger: TACTTGAGCCCAGGAGGTCAAAGCTGAGGTGAGCCA...GAAAGAAAGCAGCAGCATGATCCTGACATGACAGATGTGGGAGACCCACAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
CDS-3UTR CAA 90 bp AGGTCGGTGATAGTAGTATCGTCAGGATCAATTCCGAAGTGCAGCTTGCCGTCCTGGCTCACCTCAGCTTaGACCTCCTGGGCTCAAGTA +
Preference number: 5 (lower is better)
Translates to: RSVIVVSSGSIPKCSLPSWLTSA*TSWAQV
Trigger: TACTTGAGCCCAGGAGGTCAAAGCTGAGGTGAGCCA...GGACGGCAAGCTGCACTTCGGAATTGATCCTGACGATACTACTATCACCGACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628829.2
CDS-3UTR CAA 90 bp TTGTCACTCCCAGACATCCTGGAGCTGCACCAAAAGCAGAAAGGGAACGCAGCAAATGAGGTGTCTGCGTaGAACTCGGGATCGTCTTCC +
Preference number: 5 (lower is better)
Translates to: LSLPDILELHQKQKGNAANEVSA*NSGSSS
Trigger: GGAAGACGATCCCGAGTTCAACGCAGACACCTCATT...TGCTGCGTTCCCTTTCTGCTTTTGGTGCAGCTCCAGGATGTCTGGGAGTGACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534183.5
CDS TCA 90 bp CCTGACTCACATTATTTACTAGCTGAAAGGCACATTTACCTGCGTTaGACTCGGGATCGTCTTCCAGGGCGACGACAGCTCCCTCTACGG +
Preference number: 5 (lower is better)
Translates to: PDSHYLLAERHIYLR*TRDRLPGRRQLPLR
Trigger: CCGTAGAGGGAGCTGTCGTCGCCCTGGAAGACGATCCCGAGTTCAACGCAGGTAAATGTGCCTTTCAGCTAGTAAATAATGTGAGTCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525496.1
CDS GCA 90 bp TTCTCCAGGAATCTCTGGAACCCCCATAGCTGCTGCAAACTGCGCTaGGCCTTGGTCAGTCAGAAAGCAATGAGGTGTCTTTTCCATGAC +
Preference number: 5 (lower is better)
Translates to: FSRNLWNPHSCCKLR*ALVSQKAMRCLFHD
Trigger: GTCATGGAAAAGACACCTCATTGCTTTCTGACTGACCAAGGCGCAGCGCAGTTTGCAGCAGCTATGGGGGTTCCAGAGATTCCTGGAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301776.9
ENST00000415229.6
ENST00000526096.2
ENST00000534571.5
CDS GCA 90 bp TGTCACCAGTTTTTCTCCAGGAATCTCTGGAACCCCCATAGCTGCTaGAAACTGCGCTGCGCCTTGGTCAGTCAGAAAGCAATGAGGTGT +
Preference number: 5 (lower is better)
Translates to: CHQFFSRNLWNPHSC*KLRCALVSQKAMRC
Trigger: ACACCTCATTGCTTTCTGACTGACCAAGGCGCAGCGCAGTTTGCAGCAGCTATGGGGGTTCCAGAGATTCCTGGAGAAAAACTGGTGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000301776.9
ENST00000415229.6
ENST00000526096.2
ENST00000529226.3
ENST00000534183.5
ENST00000534571.5
ENST00000628829.2
CDS-3UTR CAA 90 bp ATGGAATGTCAAGTTAAGCAAATTCTTTCCAGAGAGAAGGTGAGCCTGACAGACCGCTCCTTCCGATCCTaGGAGATGGGACCGGCTCCG +
Preference number: 5 (lower is better)
Translates to: MECQVKQILSREKVSLTDRSFRS*EMGPAP
Trigger: CGGAGCCGGTCCCATCTCCAAGGATCGGAAGGAGCG...GTCTGTCAGGCTCACCTTCTCTCTGGAAAGAATTTGCTTAACTTGACATTCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
CDS-3UTR CAA 90 bp ACTGCGGAAGGCTGCAGGGACCTCTGCCTAGGAAAGCCAGGTATTGTCCAAGGTTTTTCCAGGCGCTTTTaGTTTCTCTCTGTCACCAGT +
Preference number: 5 (lower is better)
Translates to: TAEGCRDLCLGKPGIVQGFSRRF*FLSVTS
Trigger: ACTGGTGACAGAGAGAAACAAAAAGCGCCTGGAAAA...ACCTTGGACAATACCTGGCTTTCCTAGGCAGAGGTCCCTGCAGCCTTCCGCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528206.1
CDS-3UTR CAA 90 bp GTGATAGTAGTATCGTCAGGATCAATTCCGAAGTGCAGCTTGCCGTCCTTGGCGACCCAGTCTCCTGTTTaGCTAACCACGATGAGGCCA +
Preference number: 5 (lower is better)
Translates to: VIVVSSGSIPKCSLPSLATQSPV*LTTMRP
Trigger: TGGCCTCATCGTGGTTAGCAAAACAGGAGACTGGGT...CGCCAAGGACGGCAAGCTGCACTTCGGAATTGATCCTGACGATACTACTATCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628829.2
CDS-3UTR CAA 90 bp TCCTTGTTCTATGTGGAACAGGGTGAGTCTAGCCAGGTTCACCTTCAGGATGCTAGGTGGAGGTCCACTTaGCCACCCAGTCTCCTGTTT +
Preference number: 5 (lower is better)
Translates to: SLFYVEQGESSQVHLQDARWRST*PPSLLF
Trigger: AAACAGGAGACTGGGTGGCAAAGTGGACCTCCACCT...AGCATCCTGAAGGTGAACCTGGCTAGACTCACCCTGTTCCACATAGAACAAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628829.2
CDS-3UTR CAA 90 bp CCACCACTGCTTCTACTGCTGCTGTGTCACTTTCAAACAGCTCCACCTCCACCGTTTTCCCTGATGTTCTaGTGCAACGTTCTGAGGGTC +
Preference number: 5 (lower is better)
Translates to: PPLLLLLLCHFQTAPPPPFSLMF*CNVLRV
Trigger: GACCCTCAGAACGTTGCACAAGAACATCAGGGAAAA...CGGTGGAGGTGGAGCTGTTTGAAAGTGACACAGCAGCAGTAGAAGCAGTGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
CDS-3UTR CAA 90 bp CATTTCTCTCATCGCTTCAGAACCCGCCCCACAACCAAACATTCAGATGCTTATGACCCACAACCTGCGTaGAACTCGGGATCGTCTTCC +
Preference number: 5 (lower is better)
Translates to: HFSHRFRTRPTTKHSDAYDPQPA*NSGSSS
Trigger: GGAAGACGATCCCGAGTTCAACGCAGGTTGTGGGTC...ATAAGCATCTGAATGTTTGGTTGTGGGGCGGGTTCTGAAGCGATGAGAGAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
CDS-3UTR CAA 90 bp CAGCTCCTCTCTGTTGTTGGAGAGGCCCTGAGCCCCATTACTCACTATACGAGGTTTTCCAGGCGCTTTTaGTTTCTCTCTGTCACCAGT +
Preference number: 5 (lower is better)
Translates to: QLLSVVGEALSPITHYTRFSRRF*FLSVTS
Trigger: ACTGGTGACAGAGAGAAACAAAAAGCGCCTGGAAAA...CCTCGTATAGTGAGTAATGGGGCTCAGGGCCTCTCCAACAACAGAGAGGAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
CDS-3UTR CAA 90 bp TACGGGCATTTCTCTCATCGCTTCAGAACCCGCCCCACAACCAAACATTCAGATACCCAGTCTCCTGTTTaGCTAACCACGATGAGGCCA +
Preference number: 5 (lower is better)
Translates to: YGHFSHRFRTRPTTKHSDTQSPV*LTTMRP
Trigger: TGGCCTCATCGTGGTTAGCAAAACAGGAGACTGGGT...ATCTGAATGTTTGGTTGTGGGGCGGGTTCTGAAGCGATGAGAGAAATGCCCGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301776.9
ENST00000415229.6
ENST00000628829.2
CDS-3UTR CAA 90 bp TTGATTAGGCTATGTCTCATGAGGAGACTGTACTTGACCTCTAAGCTAGCATCTATTCCGAAGTGCAGCTaGCCGTCCTTGGCGGCTGCC +
Preference number: 5 (lower is better)
Translates to: LIRLCLMRRLYLTSKLASIPKCS*PSLAAA
Trigger: GGCAGCCGCCAAGGACGGCAAGCTGCACTTCGGAAT...AGATGCTAGCTTAGAGGTCAAGTACAGTCTCCTCATGAGACATAGCCTAATCAA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301776.9
ENST00000415229.6
ENST00000628829.2
CDS-3UTR CAA 90 bp GCATCAGCTCCTCTCTGTTGTTGGAGAGGCCCTGAGCCCCATTACTCACTATACTTTTCCCTGATGTTCTaGTGCAACGTTCTGAGGGTC +
Preference number: 5 (lower is better)
Translates to: ASAPLCCWRGPEPHYSLYFSLMF*CNVLRV
Trigger: GACCCTCAGAACGTTGCACAAGAACATCAGGGAAAA...GTATAGTGAGTAATGGGGCTCAGGGCCTCTCCAACAACAGAGAGGAGCTGATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
CDS-3UTR CAA 90 bp GTCGGTGATAGTAGTATCGTCAGGATCAATTCCGAAGTGCAGCTTGCCGTCCTTAATGAGGTGTCTGCGTaGAACTCGGGATCGTCTTCC +
Preference number: 5 (lower is better)
Translates to: VGDSSIVRINSEVQLAVLNEVSA*NSGSSS
Trigger: GGAAGACGATCCCGAGTTCAACGCAGACACCTCATT...AAGGACGGCAAGCTGCACTTCGGAATTGATCCTGACGATACTACTATCACCGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628829.2
CDS-3UTR CAA 90 bp ACTGCGGAAGGCTGCAGGGACCTCTGCCTAGGAAAGCCAGGTATTGTCCAAGGTGTCATTGAGAACAAGTaGATGAGAGATTCCCGAGTA +
Preference number: 5 (lower is better)
Translates to: TAEGCRDLCLGKPGIVQGVIENK*MRDSRV
Trigger: TACTCGGGAATCTCTCATCAACTTGTTCTCAATGAC...ACCTTGGACAATACCTGGCTTTCCTAGGCAGAGGTCCCTGCAGCCTTCCGCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528206.1
CDS-3UTR CAA 90 bp GTTCTTTTCCCTGATGTTCTTGTGCAACGTTCTGAGGGTCACCTGGGCTTCGCCTTTCAACCTCACCATTaGTGTTCAAGACAGACCCAC +
Preference number: 5 (lower is better)
Translates to: VLFPDVLVQRSEGHLGFAFQPHH*CSRQTH
Trigger: GTGGGTCTGTCTTGAACACAAATGGTGAGGTTGAAA...GGCGAAGCCCAGGTGACCCTCAGAACGTTGCACAAGAACATCAGGGAAAAGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
CDS-3UTR CAA 90 bp TCAGCTCCTCTCTGTTGTTGGAGAGGCCCTGAGCCCCATTACTCACTATACGAGTTCTACCGTCTTTCCTaGTTCTATGTGGAACAGGGT +
Preference number: 5 (lower is better)
Translates to: SAPLCCWRGPEPHYSLYEFYRLS*FYVEQG
Trigger: ACCCTGTTCCACATAGAACAAGGAAAGACGGTAGAA...CTCGTATAGTGAGTAATGGGGCTCAGGGCCTCTCCAACAACAGAGAGGAGCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
CDS-3UTR CAA 90 bp GCATCAGCTCCTCTCTGTTGTTGGAGAGGCCCTGAGCCCCATTACTCACTATACATGAGGAGACTGTACTaGACCTCTAAGCTAGCATCT +
Preference number: 5 (lower is better)
Translates to: ASAPLCCWRGPEPHYSLYMRRLY*TSKLAS
Trigger: AGATGCTAGCTTAGAGGTCAAGTACAGTCTCCTCAT...GTATAGTGAGTAATGGGGCTCAGGGCCTCTCCAACAACAGAGAGGAGCTGATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
CDS-3UTR CAA 90 bp GTTCTTTTCCCTGATGTTCTTGTGCAACGTTCTGAGGGTCACCTGGGCTTCGCCATGAGGAGACTGTACTaGACCTCTAAGCTAGCATCT +
Preference number: 5 (lower is better)
Translates to: VLFPDVLVQRSEGHLGFAMRRLY*TSKLAS
Trigger: AGATGCTAGCTTAGAGGTCAAGTACAGTCTCCTCAT...GGCGAAGCCCAGGTGACCCTCAGAACGTTGCACAAGAACATCAGGGAAAAGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
CDS-3UTR CAA 90 bp AGGCTGTGGGTCTCCCACATCTGTCATGTCAGGATCATGCTGCTGCTTTCTTTCTTTTCCAGGCGCTTTTaGTTTCTCTCTGTCACCAGT +
Preference number: 5 (lower is better)
Translates to: RLWVSHICHVRIMLLLSFFSRRF*FLSVTS
Trigger: ACTGGTGACAGAGAGAAACAAAAAGCGCCTGGAAAA...GAAAGAAAGCAGCAGCATGATCCTGACATGACAGATGTGGGAGACCCACAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
CDS-3UTR CAA 90 bp AGGCTGTGGGTCTCCCACATCTGTCATGTCAGGATCATGCTGCTGCTTTCTTTCTTCCCAGAGGGTCCTTaGGAAGTATCTAGAAATGTC +
Preference number: 5 (lower is better)
Translates to: RLWVSHICHVRIMLLLSFFPEGP*EVSRNV
Trigger: GACATTTCTAGATACTTCCAAAGGACCCTCTGGGAA...GAAAGAAAGCAGCAGCATGATCCTGACATGACAGATGTGGGAGACCCACAGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
CDS-3UTR CAA 90 bp GGCAACGTTAGCATCCCTGTCTCCACTTCTCTCCCCAAGTTGTTCCAAAAAGGCCTCAGATTTCTCAGATaGCTAATCAGAGCCCATGTC +
Preference number: 5 (lower is better)
Translates to: GNVSIPVSTSLPKLFQKGLRFLR*LIRAHV
Trigger: GACATGGGCTCTGATTAGCAATCTGAGAAATCTGAG...GCCTTTTTGGAACAACTTGGGGAGAGAAGTGGAGACAGGGATGCTAACGTTGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534183.5
CDS GCA 90 bp CCGAGCAAGTTTAATGGGATTTGCTATACACTGGACTGCGGACACTaGTCCTGCAGACAGGTCTTTTCCATCCATGATACTAGCATCCAT +
Preference number: 5 (lower is better)
Translates to: PSKFNGICYTLDCGH*SCRQVFSIHDTSIH
Trigger: ATGGATGCTAGTATCATGGATGGAAAAGACCTGTCTGCAGGAGCAGTGTCCGCAGTCCAGTGTATAGCAAATCCCATTAAACTTGCTCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301776.9
ENST00000415229.6
ENST00000526096.2
ENST00000534571.5
CDS GCA 90 bp CATGACAAGCCGAGCAAGTTTAATGGGATTTGCTATACACTGGACTaGGGACACTGCTCCTGCAGACAGGTCTTTTCCATCCATGATACT +
Preference number: 5 (lower is better)
Translates to: HDKPSKFNGICYTLD*GHCSCRQVFSIHDT
Trigger: AGTATCATGGATGGAAAAGACCTGTCTGCAGGAGCAGTGTCCGCAGTCCAGTGTATAGCAAATCCCATTAAACTTGCTCGGCTTGTCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301776.9
ENST00000415229.6
ENST00000526096.2
ENST00000534571.5
CDS GCA 90 bp ATGAGGTGTCTTTTCCATGACAAGCCGAGCAAGTTTAATGGGATTTaGTATACACTGGACTGCGGACACTGCTCCTGCAGACAGGTCTTT +
Preference number: 5 (lower is better)
Translates to: MRCLFHDKPSKFNGI*YTLDCGHCSCRQVF
Trigger: AAAGACCTGTCTGCAGGAGCAGTGTCCGCAGTCCAGTGTATAGCAAATCCCATTAAACTTGCTCGGCTTGTCATGGAAAAGACACCTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301776.9
ENST00000415229.6
ENST00000526096.2
ENST00000534571.5
CDS CCA 90 bp TTTTCCATGACAAGCCGAGCAAGTTTAATGGGATTTGCTATACACTaGACTGCGGACACTGCTCCTGCAGACAGGTCTTTTCCATCCATG +
Preference number: 5 (lower is better)
Translates to: FSMTSRASLMGFAIH*TADTAPADRSFPSM
Trigger: CATGGATGGAAAAGACCTGTCTGCAGGAGCAGTGTCCGCAGTCCAGTGTATAGCAAATCCCATTAAACTTGCTCGGCTTGTCATGGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301776.9
ENST00000415229.6
ENST00000526096.2
ENST00000534571.5
CDS-3UTR CAA 90 bp GCTTCAGAACCCGCCCCACAACCAAACATTCAGATGCTTATTAAGGCAACAAAAAAACTGCGCTGCGCCTaGGTCAGTCAGAAAGCAATG +
Preference number: 5 (lower is better)
Translates to: ASEPAPQPNIQMLIKATKKLRCA*VSQKAM
Trigger: CATTGCTTTCTGACTGACCAAGGCGCAGCGCAGTTT...TTTTGTTGCCTTAATAAGCATCTGAATGTTTGGTTGTGGGGCGGGTTCTGAAGC
48% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000301776.9
ENST00000415229.6
ENST00000628829.2
CDS-3UTR CAA 90 bp TTGATTAGGCTATGTCTCATGAGGAGACTGTACTTGACCTCTAAGCTAGCATCTAGGTGGAGGTCCACTTaGCCACCCAGTCTCCTGTTT +
Preference number: 5 (lower is better)
Translates to: LIRLCLMRRLYLTSKLASRWRST*PPSLLF
Trigger: AAACAGGAGACTGGGTGGCAAAGTGGACCTCCACCT...AGATGCTAGCTTAGAGGTCAAGTACAGTCTCCTCATGAGACATAGCCTAATCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301776.9
ENST00000415229.6
ENST00000628829.2
CDS-3UTR CAA 90 bp GTCGGTGATAGTAGTATCGTCAGGATCAATTCCGAAGTGCAGCTTGCCGTCCTTATGAGGAGACTGTACTaGACCTCTAAGCTAGCATCT +
Preference number: 5 (lower is better)
Translates to: VGDSSIVRINSEVQLAVLMRRLY*TSKLAS
Trigger: AGATGCTAGCTTAGAGGTCAAGTACAGTCTCCTCAT...AAGGACGGCAAGCTGCACTTCGGAATTGATCCTGACGATACTACTATCACCGAC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628829.2
CDS-3UTR CAA 90 bp TGTTTTCCTGCTGACCCTCTCCTCTCTATTAACTTATTGTCCTGCCACATCCCCCCCTCGGAAGAACTTTaGACAATCTGTTTTCTGAGC +
Preference number: 5 (lower is better)
Translates to: CFPADPLLSINLLSCHIPPSEEL*TICFLS
Trigger: GCTCAGAAAACAGATTGTCAAAAGTTCTTCCGAGGG...GGGGATGTGGCAGGACAATAAGTTAATAGAGAGGAGAGGGTCAGCAGGAAAACA
47% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000528206.1
CDS-3UTR CAA 90 bp CATTTCTCTCATCGCTTCAGAACCCGCCCCACAACCAAACATTCAGATGCTTATTTCCCAGAGGGTCCTTaGGAAGTATCTAGAAATGTC +
Preference number: 5 (lower is better)
Translates to: HFSHRFRTRPTTKHSDAYFPEGP*EVSRNV
Trigger: GACATTTCTAGATACTTCCAAAGGACCCTCTGGGAA...ATAAGCATCTGAATGTTTGGTTGTGGGGCGGGTTCTGAAGCGATGAGAGAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
CDS GCA 90 bp AAGTTTAATGGGATTTGCTATACACTGGACTGCGGACACTGCTCCTaGAGACAGGTCTTTTCCATCCATGATACTAGCATCCATTTCAAC +
Preference number: 5 (lower is better)
Translates to: KFNGICYTLDCGHCS*RQVFSIHDTSIHFN
Trigger: GTTGAAATGGATGCTAGTATCATGGATGGAAAAGACCTGTCTGCAGGAGCAGTGTCCGCAGTCCAGTGTATAGCAAATCCCATTAAACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301776.9
ENST00000415229.6
ENST00000526096.2
ENST00000534571.5
CDS-3UTR CAA 90 bp GCTTCAGAACCCGCCCCACAACCAAACATTCAGATGCTTATTAAGGCAACAAAATTTCAACCTCACCATTaGTGTTCAAGACAGACCCAC +
Preference number: 5 (lower is better)
Translates to: ASEPAPQPNIQMLIKATKFQPHH*CSRQTH
Trigger: GTGGGTCTGTCTTGAACACAAATGGTGAGGTTGAAA...TTTTGTTGCCTTAATAAGCATCTGAATGTTTGGTTGTGGGGCGGGTTCTGAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301776.9
ENST00000415229.6
CDS-3UTR CAA 90 bp CCTGTCTCCACTTCTCTCCCCAAGTTGTTCCAAAAAGGCATGCAATCTAGTAAATTTTCCAGGCGCTTTTaGTTTCTCTCTGTCACCAGT +
Preference number: 5 (lower is better)
Translates to: PVSTSLPKLFQKGMQSSKFSRRF*FLSVTS
Trigger: ACTGGTGACAGAGAGAAACAAAAAGCGCCTGGAAAA...TTTACTAGATTGCATGCCTTTTTGGAACAACTTGGGGAGAGAAGTGGAGACAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000534183.5
CDS-3UTR CAA 90 bp TGTTTTCCTGCTGACCCTCTCCTCTCTATTAACTTATTGTCCTGCCACATCCCCATGACACAGAGACATTaGTTCACATGTTTTCCTGCT +
Preference number: 5 (lower is better)
Translates to: CFPADPLLSINLLSCHIPMTQRH*FTCFPA
Trigger: AGCAGGAAAACATGTGAACAAATGTCTCTGTGTCAT...GGGGATGTGGCAGGACAATAAGTTAATAGAGAGGAGAGGGTCAGCAGGAAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000528206.1
CDS-3UTR CAA 90 bp AACATTCAGATGCTTATTAAGGCAACAAAACAAGTGACAGACGGGACAATTTTTTACCGCCTGTGGAGGTaGCGTAGGCTACATTCCCTT +
Preference number: 5 (lower is better)
Translates to: NIQMLIKATKQVTDGTIFYRLWR*RRLHSL
Trigger: AAGGGAATGTAGCCTACGCAACCTCCACAGGCGGTA...AAAAATTGTCCCGTCTGTCACTTGTTTTGTTGCCTTAATAAGCATCTGAATGTT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301776.9
ENST00000415229.6
ENST00000628829.2
CDS-3UTR CAA 90 bp AACATTCAGATGCTTATTAAGGCAACAAAACAAGTGACAGACGGGACAATTTTTTTCTACCGTCTTTCCTaGTTCTATGTGGAACAGGGT +
Preference number: 5 (lower is better)
Translates to: NIQMLIKATKQVTDGTIFFYRLS*FYVEQG
Trigger: ACCCTGTTCCACATAGAACAAGGAAAGACGGTAGAA...AAAAATTGTCCCGTCTGTCACTTGTTTTGTTGCCTTAATAAGCATCTGAATGTT
39% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000301776.9
ENST00000415229.6
ENST00000628829.2
CDS CCA 72 bp AGGGCACCGCAGGACGCGGACGCCGAGACCTCAAGCTaGGTCGAGCCAGCCCCGCAGCCGCCCGGTACCGCC +
Preference number: 6 (lower is better)
Translates to: RAPQDADAETSS*VEPAPQPPGTA
Trigger: GGCGGTACCGGGCGGCTGCGGGGCTGGCTCGACCCAGCTTGAGGTCTCGGCGTCCGCGTCCTGCGGTGCCCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000301776.9
ENST00000415229.6
ENST00000525496.1
ENST00000529226.3
ENST00000534183.5
ENST00000534571.5
ENST00000628829.2
CDS CAA 90 bp GTGGCGGCTCTGACCATGCCCTGGTGCACTCGCTCCTTCCGATCCTaGGAGATGGGACCGGCTCCGCCGCCGTGGACCACCAGGGCACCG +
Preference number: 6 (lower is better)
Translates to: VAALTMPWCTRSFRS*EMGPAPPPWTTRAP
Trigger: CGGTGCCCTGGTGGTCCACGGCGGCGGAGCCGGTCCCATCTCCAAGGATCGGAAGGAGCGAGTGCACCAGGGCATGGTCAGAGCCGCCAC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526096.2
CDS CCA 72 bp TGCCCTGGTGCACTCGCTCCTTCCGATCCTTGGAGATaGGACCGGCTCCGCCGCCGTGGACCACCAGGGCAC +
Preference number: 6 (lower is better)
Translates to: CPGALAPSDPWR*DRLRRRGPPGH
Trigger: GTGCCCTGGTGGTCCACGGCGGCGGAGCCGGTCCCATCTCCAAGGATCGGAAGGAGCGAGTGCACCAGGGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526096.2
CDS TCA 72 bp CCTCCCGGAGGATGCCGTAGCCCACGGTGGCGGCTCTaGCCATGCCCTGGTGCACTCGCTCCTTCCGATCCT +
Preference number: 6 (lower is better)
Translates to: PPGGCRSPRWRL*PCPGALAPSDP
Trigger: AGGATCGGAAGGAGCGAGTGCACCAGGGCATGGTCAGAGCCGCCACCGTGGGCTACGGCATCCTCCGGGAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000301776.9
ENST00000415229.6
ENST00000525496.1
ENST00000526096.2
ENST00000529226.3
ENST00000534183.5
ENST00000534571.5
ENST00000628829.2
CDS CCA 72 bp AGATGGGACCGGCTCCGCCGCCGTGGACCACTACGATaGGATTCATGTCGGCGGATCCCAGGGCACCGCAGG +
Preference number: 6 (lower is better)
Translates to: RWDRLRRRGPLR*DSCRRIPGHRR
Trigger: CCTGCGGTGCCCTGGGATCCGCCGACATGAATCCCATCGTAGTGGTCCACGGCGGCGGAGCCGGTCCCATCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301776.9
ENST00000534183.5
ENST00000534571.5
ENST00000628829.2
CDS CAA 72 bp CTGACCATGCCCTGGTGCACTCGCTCCTTCCGATCCTaGGAGATGGGACCGGCTCCGCCGCCGTGGACCACC +
Preference number: 6 (lower is better)
Translates to: LTMPWCTRSFRS*EMGPAPPPWTT
Trigger: GGTGGTCCACGGCGGCGGAGCCGGTCCCATCTCCAAGGATCGGAAGGAGCGAGTGCACCAGGGCATGGTCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526096.2
CDS CAA 90 bp GTGGCGGCTCTGACCATGCCCTGGTGCACTCGCTCCTTCCGATCCTaGGAGATGGGACCGGCTCCGCCGCCGTGGACCACTACGATGGGA +
Preference number: 6 (lower is better)
Translates to: VAALTMPWCTRSFRS*EMGPAPPPWTTTMG
Trigger: TCCCATCGTAGTGGTCCACGGCGGCGGAGCCGGTCCCATCTCCAAGGATCGGAAGGAGCGAGTGCACCAGGGCATGGTCAGAGCCGCCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000301776.9
ENST00000415229.6
ENST00000525496.1
ENST00000529226.3
ENST00000534183.5
ENST00000534571.5
ENST00000628829.2
CDS CCA 72 bp TGCCCTGGTGCACTCGCTCCTTCCGATCCTTGGAGATaGGACCGGCTCCGCCGCCGTGGACCACTACGATGG +
Preference number: 6 (lower is better)
Translates to: CPGALAPSDPWR*DRLRRRGPLRW
Trigger: CCATCGTAGTGGTCCACGGCGGCGGAGCCGGTCCCATCTCCAAGGATCGGAAGGAGCGAGTGCACCAGGGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000301776.9
ENST00000415229.6
ENST00000525496.1
ENST00000529226.3
ENST00000534183.5
ENST00000534571.5
ENST00000628829.2
CDS CAA 72 bp CTGACCATGCCCTGGTGCACTCGCTCCTTCCGATCCTaGGAGATGGGACCGGCTCCGCCGCCGTGGACCACT +
Preference number: 6 (lower is better)
Translates to: LTMPWCTRSFRS*EMGPAPPPWTT
Trigger: AGTGGTCCACGGCGGCGGAGCCGGTCCCATCTCCAAGGATCGGAAGGAGCGAGTGCACCAGGGCATGGTCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000301776.9
ENST00000415229.6
ENST00000525496.1
ENST00000529226.3
ENST00000534183.5
ENST00000534571.5
ENST00000628829.2
CDS CCA 72 bp TTCCGATCCTTGGAGATGGGACCGGCTCCGCCGCCGTaGACCACTACGATGGGATTCATGTCGGCGGATCCC +
Preference number: 6 (lower is better)
Translates to: FRSLEMGPAPPP*TTTMGFMSADP
Trigger: GGGATCCGCCGACATGAATCCCATCGTAGTGGTCCACGGCGGCGGAGCCGGTCCCATCTCCAAGGATCGGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301776.9
ENST00000534183.5
ENST00000534571.5
ENST00000628829.2
CDS CCA 72 bp AGATGGGACCGGCTCCGCCGCCGTGGACCACTACGATaGGATTCATGTCGGCGGATCCTAGGCAGCAGGAAG +
Preference number: 6 (lower is better)
Translates to: RWDRLRRRGPLR*DSCRRILGSRK
Trigger: CTTCCTGCTGCCTAGGATCCGCCGACATGAATCCCATCGTAGTGGTCCACGGCGGCGGAGCCGGTCCCATCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415229.6
ENST00000525496.1
ENST00000529226.3
CDS CCA 72 bp TTCCGATCCTTGGAGATGGGACCGGCTCCGCCGCCGTaGACCACTACGATGGGATTCATGTCGGCGGATCCT +
Preference number: 6 (lower is better)
Translates to: FRSLEMGPAPPP*TTTMGFMSADP
Trigger: AGGATCCGCCGACATGAATCCCATCGTAGTGGTCCACGGCGGCGGAGCCGGTCCCATCTCCAAGGATCGGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415229.6
ENST00000525496.1
ENST00000529226.3
CDS GCA 72 bp AATCTCTGGAACCCCCATAGCTGCTGCAAACTGCGCTaGGCCTTGGTCAGTCAGAAAGCAATGAGGTGTCTG +
Preference number: 6 (lower is better)
Translates to: NLWNPHSCCKLR*ALVSQKAMRCL
Trigger: CAGACACCTCATTGCTTTCTGACTGACCAAGGCGCAGCGCAGTTTGCAGCAGCTATGGGGGTTCCAGAGATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000529226.3
ENST00000534183.5
ENST00000628829.2
CDS CAA 90 bp AGGAATCTCTGGAACCCCCATAGCTGCTGCAAACTGCGCTGCGCCTaGGTCAGTCAGAAAGCAATGAGGTGTCTTTTCCATGACAAGCCG +
Preference number: 6 (lower is better)
Translates to: RNLWNPHSCCKLRCA*VSQKAMRCLFHDKP
Trigger: CGGCTTGTCATGGAAAAGACACCTCATTGCTTTCTGACTGACCAAGGCGCAGCGCAGTTTGCAGCAGCTATGGGGGTTCCAGAGATTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301776.9
ENST00000415229.6
ENST00000526096.2
ENST00000534571.5
CDS GCA 72 bp AATCTCTGGAACCCCCATAGCTGCTGCAAACTGCGCTaGGCCTTGGTCAGTCAGAAAGCAATGAGGTGTCTT +
Preference number: 6 (lower is better)
Translates to: NLWNPHSCCKLR*ALVSQKAMRCL
Trigger: AAGACACCTCATTGCTTTCTGACTGACCAAGGCGCAGCGCAGTTTGCAGCAGCTATGGGGGTTCCAGAGATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000301776.9
ENST00000415229.6
ENST00000526096.2
ENST00000534571.5
CDS CAA 72 bp TGGAACCCCCATAGCTGCTGCAAACTGCGCTGCGCCTaGGTCAGTCAGAAAGCAATGAGGTGTCTTTTCCAT +
Preference number: 6 (lower is better)
Translates to: WNPHSCCKLRCA*VSQKAMRCLFH
Trigger: ATGGAAAAGACACCTCATTGCTTTCTGACTGACCAAGGCGCAGCGCAGTTTGCAGCAGCTATGGGGGTTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301776.9
ENST00000415229.6
ENST00000526096.2
ENST00000534571.5
CDS TCA 72 bp CATTATTTACTAGCTGAAAGGCACATTTACCTGCGTTaGACTCGGGATCGTCTTCCAGGGCGACGACAGCTC +
Preference number: 6 (lower is better)
Translates to: HYLLAERHIYLR*TRDRLPGRRQL
Trigger: GAGCTGTCGTCGCCCTGGAAGACGATCCCGAGTTCAACGCAGGTAAATGTGCCTTTCAGCTAGTAAATAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525496.1
CDS GCA 72 bp GGGATTTGCTATACACTGGACTGCGGACACTGCTCCTaGAGACAGGTCTTTTCCATCCATGATACTAGCATC +
Preference number: 6 (lower is better)
Translates to: GICYTLDCGHCS*RQVFSIHDTSI
Trigger: GATGCTAGTATCATGGATGGAAAAGACCTGTCTGCAGGAGCAGTGTCCGCAGTCCAGTGTATAGCAAATCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301776.9
ENST00000415229.6
ENST00000526096.2
ENST00000534571.5
CDS GCA 72 bp CCGAGCAAGTTTAATGGGATTTGCTATACACTGGACTaGGGACACTGCTCCTGCAGACAGGTCTTTTCCATC +
Preference number: 6 (lower is better)
Translates to: PSKFNGICYTLD*GHCSCRQVFSI
Trigger: GATGGAAAAGACCTGTCTGCAGGAGCAGTGTCCGCAGTCCAGTGTATAGCAAATCCCATTAAACTTGCTCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301776.9
ENST00000415229.6
ENST00000526096.2
ENST00000534571.5
CDS GCA 72 bp CTTTTCCATGACAAGCCGAGCAAGTTTAATGGGATTTaGTATACACTGGACTGCGGACACTGCTCCTGCAGA +
Preference number: 6 (lower is better)
Translates to: LFHDKPSKFNGI*YTLDCGHCSCR
Trigger: TCTGCAGGAGCAGTGTCCGCAGTCCAGTGTATAGCAAATCCCATTAAACTTGCTCGGCTTGTCATGGAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301776.9
ENST00000415229.6
ENST00000526096.2
ENST00000534571.5
CDS CCA 72 bp ACAAGCCGAGCAAGTTTAATGGGATTTGCTATACACTaGACTGCGGACACTGCTCCTGCAGACAGGTCTTTT +
Preference number: 6 (lower is better)
Translates to: TSRASLMGFAIH*TADTAPADRSF
Trigger: AAAAGACCTGTCTGCAGGAGCAGTGTCCGCAGTCCAGTGTATAGCAAATCCCATTAAACTTGCTCGGCTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301776.9
ENST00000415229.6
ENST00000526096.2
ENST00000534571.5