Pregenerated sensors for ASPRV1 (Homo sapiens)
Ensembl gene IDs: ENSG00000244617Ensembl transcript IDs: ENST00000320256.5, ENST00000320256.6
Found 42 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCAAAGACAAGCATTTCTAGCTTCCTTGGGAGCTCTTCCAGCCTTTaGGTCTTTGTCATCAACAGCAGCTTGATGACCATGGGGACCCTG | + |
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Preference number: 1 (lower is better) Translates to: SKTSISSFLGSSSSL*VFVINSSLMTMGTL Trigger: CAGGGTCCCCATGGTCATCAAGCTGCTGTTGATGACAAAGACTCAAAGGCTGGAAGAGCTCCCAAGGAAGCTAGAAATGCTTGTCTTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000320256.5 |
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| 3UTR CCA 90 bp | ATGGGCTTCAAAGCAAATGACAGAAAGAAAATACGATTGTACAGGTaGAAAGGCTCTTCAGGGAGGTGTCCCAGAGCAACTGTGACCCTC | + |
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Preference number: 1 (lower is better) Translates to: MGFKANDRKKIRLYR*KGSSGRCPRATVTL Trigger: GAGGGTCACAGTTGCTCTGGGACACCTCCCTGAAGAGCCTTTCCACCTGTACAATCGTATTTTCTTTCTGTCATTTGCTTTGAAGCCCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000320256.5 |
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| 3UTR CCA 90 bp | CTTTATTGGTGTTTGCAGCAATTGAATTATTGGCATAAGGCACAATaGGCTTCAAAGCAAATGACAGAAAGAAAATACGATTGTACAGGT | + |
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Preference number: 1 (lower is better) Translates to: LYWCLQQLNYWHKAQ*ASKQMTERKYDCTG Trigger: ACCTGTACAATCGTATTTTCTTTCTGTCATTTGCTTTGAAGCCCATTGTGCCTTATGCCAATAATTCAATTGCTGCAAACACCAATAAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000320256.5 |
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| 3UTR-3UTR GCA 90 bp | AAGACAGGCTTTGAGGACCTGAGAGTGACCAAGCCATACCTCAGGGAATCTGAAGCTCTCCCTCACCTGTaGCTGTTCAGTGGAAGCCTC | + |
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Preference number: 2 (lower is better) Translates to: KTGFEDLRVTKPYLRESEALPHL*LFSGSL Trigger: GAGGCTTCCACTGAACAGGCACAGGTGAGGGAGAGC...TTCAGATTCCCTGAGGTATGGCTTGGTCACTCTCAGGTCCTCAAAGCCTGTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320256.5 |
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| 3UTR CAA 90 bp | GAAGGGGTCCCACAGTTCTTTCAAAGACAAGCATTTCTAGCTTCCTaGGGAGCTCTTCCAGCCTTTGAGTCTTTGTCATCAACAGCAGCT | + |
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Preference number: 2 (lower is better) Translates to: EGVPQFFQRQAFLAS*GALPAFESLSSTAA Trigger: AGCTGCTGTTGATGACAAAGACTCAAAGGCTGGAAGAGCTCCCAAGGAAGCTAGAAATGCTTGTCTTTGAAAGAACTGTGGGACCCCTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000320256.5 |
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| 3UTR-3UTR CAA 90 bp | GGACCCAGCCCAACTAAGACAGGCTTTGAGGACCTGAGAGTGACCAAGCCATACGTCATCAACAGCAGCTaGATGACCATGGGGACCCTG | + |
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Preference number: 3 (lower is better) Translates to: GPSPTKTGFEDLRVTKPYVINSS*MTMGTL Trigger: CAGGGTCCCCATGGTCATCAAGCTGCTGTTGATGAC...GTATGGCTTGGTCACTCTCAGGTCCTCAAAGCCTGTCTTAGTTGGGCTGGGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000320256.5 |
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| 3UTR-3UTR CAA 90 bp | AGCCCAACTAAGACAGGCTTTGAGGACCTGAGAGTGACCAAGCCATACCTCAGGGAGCTCTTCCAGCCTTaGAGTCTTTGTCATCAACAG | + |
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Preference number: 3 (lower is better) Translates to: SPTKTGFEDLRVTKPYLRELFQP*SLCHQQ Trigger: CTGTTGATGACAAAGACTCAAAGGCTGGAAGAGCTC...CCTGAGGTATGGCTTGGTCACTCTCAGGTCCTCAAAGCCTGTCTTAGTTGGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320256.5 |
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| 3UTR TCA 72 bp | AGCATTTCTAGCTTCCTTGGGAGCTCTTCCAGCCTTTaGGTCTTTGTCATCAACAGCAGCTTGATGACCATG | + |
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Preference number: 3 (lower is better) Translates to: SISSFLGSSSSL*VFVINSSLMTM Trigger: CATGGTCATCAAGCTGCTGTTGATGACAAAGACTCAAAGGCTGGAAGAGCTCCCAAGGAAGCTAGAAATGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320256.5 |
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| 3UTR CAA 72 bp | CCACAGTTCTTTCAAAGACAAGCATTTCTAGCTTCCTaGGGAGCTCTTCCAGCCTTTGAGTCTTTGTCATCA | + |
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Preference number: 4 (lower is better) Translates to: PQFFQRQAFLAS*GALPAFESLSS Trigger: TGATGACAAAGACTCAAAGGCTGGAAGAGCTCCCAAGGAAGCTAGAAATGCTTGTCTTTGAAAGAACTGTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320256.5 |
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| CDS GCA 90 bp | GGGACGACATTGGCCCCATCAAAAGGTTCCGGGACGAAGGCATGCTaGCGGCGGCCTTCCTCACTCCTGGCTCCGCTCCCGGCCATCCTG | + |
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Preference number: 5 (lower is better) Translates to: GTTLAPSKGSGTKAC*RRPSSLLAPLPAIL Trigger: CAGGATGGCCGGGAGCGGAGCCAGGAGTGAGGAAGGCCGCCGGCAGCATGCCTTCGTCCCGGAACCTTTTGATGGGGCCAATGTCGTCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000320256.6 |
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| CDS CCA 90 bp | AAGGTTCCGGGACGAAGGCATGCTGCCGGCGGCCTTCCTCACTCCTaGCTCCGCTCCCGGCCATCCTGCTGCTCTCCTCTGGAACCTCAG | + |
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Preference number: 5 (lower is better) Translates to: KVPGRRHAAGGLPHS*LRSRPSCCSPLEPQ Trigger: CTGAGGTTCCAGAGGAGAGCAGCAGGATGGCCGGGAGCGGAGCCAGGAGTGAGGAAGGCCGCCGGCAGCATGCCTTCGTCCCGGAACCTT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320256.6 |
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| CDS GCA 90 bp | TTTGGGACGACATTGGCCCCATCAAAAGGTTCCGGGACGAAGGCATaGTGCCGGCGGCCTTCCTCACTCCTGGCTCCGCTCCCGGCCATC | + |
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Preference number: 5 (lower is better) Translates to: FGTTLAPSKGSGTKA*CRRPSSLLAPLPAI Trigger: GATGGCCGGGAGCGGAGCCAGGAGTGAGGAAGGCCGCCGGCAGCATGCCTTCGTCCCGGAACCTTTTGATGGGGCCAATGTCGTCCCAAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000320256.6 |
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| CDS TCA 90 bp | GGGATAGCTCCTGCCGCCCTTCTTCTGAGGAGGGGTCCTCCTCTATaGGCTCCAGGTCAAACTCATCTTCCAGGGACCCTCCCACAGGCA | + |
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Preference number: 5 (lower is better) Translates to: GIAPAALLLRRGPPL*APGQTHLPGTLPQA Trigger: TGCCTGTGGGAGGGTCCCTGGAAGATGAGTTTGACCTGGAGCTCATAGAGGAGGACCCCTCCTCAGAAGAAGGGCGGCAGGAGCTATCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000320256.6 |
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| CDS TCA 90 bp | TTACCACATTCTCAAAGGGCTGCAGGGTGTCCAGATCGCCATCAGTaGCCTCCTCCCACAAGTTTGGGTGGACCACAGAGACCTGGGCCC | + |
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Preference number: 5 (lower is better) Translates to: LPHSQRAAGCPDRHQ*PPPTSLGGPQRPGP Trigger: GGGCCCAGGTCTCTGTGGTCCACCCAAACTTGTGGGAGGAGGTCACTGATGGCGATCTGGACACCCTGCAGCCCTTTGAGAATGTGGTAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320256.6 |
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| CDS CCA 90 bp | AGGGTGCATGTGCGGTGCTCAAAGTCCAGGATAGCATTGTGGTCCTaGAGCACATCAGTGCCAATGATGGCTTCCTCGGCACTCGCATTG | + |
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Preference number: 5 (lower is better) Translates to: RVHVRCSKSRIALWS*STSVPMMASSALAL Trigger: CAATGCGAGTGCCGAGGAAGCCATCATTGGCACTGATGTGCTCCAGGACCACAATGCTATCCTGGACTTTGAGCACCGCACATGCACCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320256.6 |
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| CDS CCA 90 bp | CCTTTCAGGGTGCATGTGCGGTGCTCAAAGTCCAGGATAGCATTGTaGTCCTGGAGCACATCAGTGCCAATGATGGCTTCCTCGGCACTC | + |
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Preference number: 5 (lower is better) Translates to: PFRVHVRCSKSRIAL*SWSTSVPMMASSAL Trigger: GAGTGCCGAGGAAGCCATCATTGGCACTGATGTGCTCCAGGACCACAATGCTATCCTGGACTTTGAGCACCGCACATGCACCCTGAAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320256.6 |
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| CDS GCA 90 bp | ACAGGCAGAAGGCGAAACTTCTTCCCTTTCAGGGTGCATGTGCGGTaGTCAAAGTCCAGGATAGCATTGTGGTCCTGGAGCACATCAGTG | + |
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Preference number: 5 (lower is better) Translates to: TGRRRNFFPFRVHVR*SKSRIALWSWSTSV Trigger: CACTGATGTGCTCCAGGACCACAATGCTATCCTGGACTTTGAGCACCGCACATGCACCCTGAAAGGGAAGAAGTTTCGCCTTCTGCCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320256.6 |
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| CDS TCA 90 bp | CAGAGTCCACCAGGAACCTCACGGGCACTTTGCCAATCTTCCCCTTaGGATAGTAGCCCTTACCCATGCTGTTGGCAAAGACGATCTCTT | + |
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Preference number: 5 (lower is better) Translates to: QSPPGTSRALCQSSP*DSSPYPCCWQRRSL Trigger: AAGAGATCGTCTTTGCCAACAGCATGGGTAAGGGCTACTATCTCAAGGGGAAGATTGGCAAAGTGCCCGTGAGGTTCCTGGTGGACTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000320256.6 |
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| CDS CCA 90 bp | ATGGTTGAGGTCATTGATGACTTCAAAGCTGTGCAGCCAGAGGTTTaGGACGACATTGGCCCCATCAAAAGGTTCCGGGACGAAGGCATG | + |
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Preference number: 5 (lower is better) Translates to: MVEVIDDFKAVQPEV*DDIGPIKRFRDEGM Trigger: CATGCCTTCGTCCCGGAACCTTTTGATGGGGCCAATGTCGTCCCAAACCTCTGGCTGCACAGCTTTGAAGTCATCAATGACCTCAACCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000320256.6 |
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| CDS GCA 90 bp | TTCATTTCAGCACCATTGGCCACCTTTACCACATTCTCAAAGGGCTaGAGGGTGTCCAGATCGCCATCAGTGACCTCCTCCCACAAGTTT | + |
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Preference number: 5 (lower is better) Translates to: FISAPLATFTTFSKG*RVSRSPSVTSSHKF Trigger: AAACTTGTGGGAGGAGGTCACTGATGGCGATCTGGACACCCTGCAGCCCTTTGAGAATGTGGTAAAGGTGGCCAATGGTGCTGAAATGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320256.6 |
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| CDS CCA 90 bp | GCCTCTCCTCTGAGGGACTCTTTCAGGAACCTTAGCTTGGTGATATaGTCCCAATGGTTGAGGTCATTGATGACTTCAAAGCTGTGCAGC | + |
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Preference number: 5 (lower is better) Translates to: ASPLRDSFRNLSLVI*SQWLRSLMTSKLCS Trigger: GCTGCACAGCTTTGAAGTCATCAATGACCTCAACCATTGGGACCATATCACCAAGCTAAGGTTCCTGAAAGAGTCCCTCAGAGGAGAGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320256.6 |
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| CDS GCA 72 bp | TTGGCCCCATCAAAAGGTTCCGGGACGAAGGCATGCTaGCGGCGGCCTTCCTCACTCCTGGCTCCGCTCCCG | + |
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Preference number: 6 (lower is better) Translates to: LAPSKGSGTKAC*RRPSSLLAPLP Trigger: CGGGAGCGGAGCCAGGAGTGAGGAAGGCCGCCGGCAGCATGCCTTCGTCCCGGAACCTTTTGATGGGGCCAA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000320256.6 |
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| CDS GCA 72 bp | ACATTGGCCCCATCAAAAGGTTCCGGGACGAAGGCATaGTGCCGGCGGCCTTCCTCACTCCTGGCTCCGCTC | + |
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Preference number: 6 (lower is better) Translates to: TLAPSKGSGTKA*CRRPSSLLAPL Trigger: GAGCGGAGCCAGGAGTGAGGAAGGCCGCCGGCAGCATGCCTTCGTCCCGGAACCTTTTGATGGGGCCAATGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000320256.6 |
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| CDS CCA 72 bp | AGATCGCCATCAGTGACCTCCTCCCACAAGTTTGGGTaGACCACAGAGACCTGGGCCCCAGAGTCCACCAGG | + |
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Preference number: 6 (lower is better) Translates to: RSPSVTSSHKFG*TTETWAPESTR Trigger: CCTGGTGGACTCTGGGGCCCAGGTCTCTGTGGTCCACCCAAACTTGTGGGAGGAGGTCACTGATGGCGATCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000320256.6 |
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| CDS CCA 72 bp | GTCCAGATCGCCATCAGTGACCTCCTCCCACAAGTTTaGGTGGACCACAGAGACCTGGGCCCCAGAGTCCAC | + |
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Preference number: 6 (lower is better) Translates to: VQIAISDLLPQV*VDHRDLGPRVH Trigger: GTGGACTCTGGGGCCCAGGTCTCTGTGGTCCACCCAAACTTGTGGGAGGAGGTCACTGATGGCGATCTGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000320256.6 |
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| CDS TCA 72 bp | CCTGCCGCCCTTCTTCTGAGGAGGGGTCCTCCTCTATaGGCTCCAGGTCAAACTCATCTTCCAGGGACCCTC | + |
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Preference number: 6 (lower is better) Translates to: PAALLLRRGPPL*APGQTHLPGTL Trigger: GAGGGTCCCTGGAAGATGAGTTTGACCTGGAGCTCATAGAGGAGGACCCCTCCTCAGAAGAAGGGCGGCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000320256.6 |
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| CDS CAA 90 bp | TCATTGATGACTTCAAAGCTGTGCAGCCAGAGGTTTGGGACGACATaGGCCCCATCAAAAGGTTCCGGGACGAAGGCATGCTGCCGGCGG | + |
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Preference number: 6 (lower is better) Translates to: SLMTSKLCSQRFGTT*APSKGSGTKACCRR Trigger: CCGCCGGCAGCATGCCTTCGTCCCGGAACCTTTTGATGGGGCCAATGTCGTCCCAAACCTCTGGCTGCACAGCTTTGAAGTCATCAATGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000320256.6 |
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| CDS TCA 72 bp | TCTCAAAGGGCTGCAGGGTGTCCAGATCGCCATCAGTaGCCTCCTCCCACAAGTTTGGGTGGACCACAGAGA | + |
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Preference number: 6 (lower is better) Translates to: SQRAAGCPDRHQ*PPPTSLGGPQR Trigger: TCTCTGTGGTCCACCCAAACTTGTGGGAGGAGGTCACTGATGGCGATCTGGACACCCTGCAGCCCTTTGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320256.6 |
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| CDS GCA 72 bp | GCACCATTGGCCACCTTTACCACATTCTCAAAGGGCTaGAGGGTGTCCAGATCGCCATCAGTGACCTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: APLATFTTFSKG*RVSRSPSVTSS Trigger: GGAGGAGGTCACTGATGGCGATCTGGACACCCTGCAGCCCTTTGAGAATGTGGTAAAGGTGGCCAATGGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320256.6 |
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| CDS CCA 72 bp | GTGCGGTGCTCAAAGTCCAGGATAGCATTGTGGTCCTaGAGCACATCAGTGCCAATGATGGCTTCCTCGGCA | + |
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Preference number: 6 (lower is better) Translates to: VRCSKSRIALWS*STSVPMMASSA Trigger: TGCCGAGGAAGCCATCATTGGCACTGATGTGCTCCAGGACCACAATGCTATCCTGGACTTTGAGCACCGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320256.6 |
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| CDS CAA 72 bp | ACTTCAAAGCTGTGCAGCCAGAGGTTTGGGACGACATaGGCCCCATCAAAAGGTTCCGGGACGAAGGCATGC | + |
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Preference number: 6 (lower is better) Translates to: TSKLCSQRFGTT*APSKGSGTKAC Trigger: GCATGCCTTCGTCCCGGAACCTTTTGATGGGGCCAATGTCGTCCCAAACCTCTGGCTGCACAGCTTTGAAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000320256.6 |
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| CDS CAA 90 bp | TTCCCTTTCAGGGTGCATGTGCGGTGCTCAAAGTCCAGGATAGCATaGTGGTCCTGGAGCACATCAGTGCCAATGATGGCTTCCTCGGCA | + |
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Preference number: 6 (lower is better) Translates to: FPFRVHVRCSKSRIA*WSWSTSVPMMASSA Trigger: TGCCGAGGAAGCCATCATTGGCACTGATGTGCTCCAGGACCACAATGCTATCCTGGACTTTGAGCACCGCACATGCACCCTGAAAGGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320256.6 |
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| CDS GCA 72 bp | AGGCGAAACTTCTTCCCTTTCAGGGTGCATGTGCGGTaGTCAAAGTCCAGGATAGCATTGTGGTCCTGGAGC | + |
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Preference number: 6 (lower is better) Translates to: RRNFFPFRVHVR*SKSRIALWSWS Trigger: GCTCCAGGACCACAATGCTATCCTGGACTTTGAGCACCGCACATGCACCCTGAAAGGGAAGAAGTTTCGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320256.6 |
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| CDS GCA 72 bp | GTTAAAGAAAAGGTGGCTTCTCAGTGGGATAGCTCCTaGCGCCCTTCTTCTGAGGAGGGGTCCTCCTCTATG | + |
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Preference number: 6 (lower is better) Translates to: VKEKVASQWDSS*RPSSEEGSSSM Trigger: CATAGAGGAGGACCCCTCCTCAGAAGAAGGGCGGCAGGAGCTATCCCACTGAGAAGCCACCTTTTCTTTAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000320256.6 |
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| CDS CCA 72 bp | GTGCATGTGCGGTGCTCAAAGTCCAGGATAGCATTGTaGTCCTGGAGCACATCAGTGCCAATGATGGCTTCC | + |
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Preference number: 6 (lower is better) Translates to: VHVRCSKSRIAL*SWSTSVPMMAS Trigger: GGAAGCCATCATTGGCACTGATGTGCTCCAGGACCACAATGCTATCCTGGACTTTGAGCACCGCACATGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320256.6 |
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| CDS CAA 72 bp | AGGGTGCATGTGCGGTGCTCAAAGTCCAGGATAGCATaGTGGTCCTGGAGCACATCAGTGCCAATGATGGCT | + |
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Preference number: 6 (lower is better) Translates to: RVHVRCSKSRIA*WSWSTSVPMMA Trigger: AGCCATCATTGGCACTGATGTGCTCCAGGACCACAATGCTATCCTGGACTTTGAGCACCGCACATGCACCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320256.6 |
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| CDS TCA 72 bp | CCAGGAACCTCACGGGCACTTTGCCAATCTTCCCCTTaGGATAGTAGCCCTTACCCATGCTGTTGGCAAAGA | + |
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Preference number: 6 (lower is better) Translates to: PGTSRALCQSSP*DSSPYPCCWQR Trigger: TCTTTGCCAACAGCATGGGTAAGGGCTACTATCTCAAGGGGAAGATTGGCAAAGTGCCCGTGAGGTTCCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000320256.6 |
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| CDS CCA 72 bp | GTCATTGATGACTTCAAAGCTGTGCAGCCAGAGGTTTaGGACGACATTGGCCCCATCAAAAGGTTCCGGGAC | + |
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Preference number: 6 (lower is better) Translates to: VIDDFKAVQPEV*DDIGPIKRFRD Trigger: GTCCCGGAACCTTTTGATGGGGCCAATGTCGTCCCAAACCTCTGGCTGCACAGCTTTGAAGTCATCAATGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000320256.6 |
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| CDS CAA 90 bp | AGGGACTCTTTCAGGAACCTTAGCTTGGTGATATGGTCCCAATGGTaGAGGTCATTGATGACTTCAAAGCTGTGCAGCCAGAGGTTTGGG | + |
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Preference number: 6 (lower is better) Translates to: RDSFRNLSLVIWSQW*RSLMTSKLCSQRFG Trigger: CCCAAACCTCTGGCTGCACAGCTTTGAAGTCATCAATGACCTCAACCATTGGGACCATATCACCAAGCTAAGGTTCCTGAAAGAGTCCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320256.6 |
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| CDS CAA 90 bp | TTCAGGAACCTTAGCTTGGTGATATGGTCCCAATGGTTGAGGTCATaGATGACTTCAAAGCTGTGCAGCCAGAGGTTTGGGACGACATTG | + |
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Preference number: 6 (lower is better) Translates to: FRNLSLVIWSQWLRS*MTSKLCSQRFGTTL Trigger: CAATGTCGTCCCAAACCTCTGGCTGCACAGCTTTGAAGTCATCAATGACCTCAACCATTGGGACCATATCACCAAGCTAAGGTTCCTGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320256.6 |
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| CDS CAA 72 bp | TTCAGGAACCTTAGCTTGGTGATATGGTCCCAATGGTaGAGGTCATTGATGACTTCAAAGCTGTGCAGCCAG | + |
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Preference number: 6 (lower is better) Translates to: FRNLSLVIWSQW*RSLMTSKLCSQ Trigger: CTGGCTGCACAGCTTTGAAGTCATCAATGACCTCAACCATTGGGACCATATCACCAAGCTAAGGTTCCTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320256.6 |
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| CDS CCA 72 bp | CTGAGGGACTCTTTCAGGAACCTTAGCTTGGTGATATaGTCCCAATGGTTGAGGTCATTGATGACTTCAAAG | + |
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Preference number: 6 (lower is better) Translates to: LRDSFRNLSLVI*SQWLRSLMTSK Trigger: CTTTGAAGTCATCAATGACCTCAACCATTGGGACCATATCACCAAGCTAAGGTTCCTGAAAGAGTCCCTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320256.6 |
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