RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ASPHD2 (Homo sapiens)

Ensembl gene IDs: ENSG00000128203

Ensembl transcript IDs: ENST00000215906.6

Found 239 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGTAGGGCTTCTGTAGGCAGTGAGGTAAGCGGATCACACGTTCCGTaGCTGATCTGTGTGAGCCGCAGCTTGGTGCTGGGGGACACCAGC +
Preference number: 1 (lower is better)
Translates to: SRASVGSEVSGSHVP*LICVSRSLVLGDTS
Trigger: GCTGGTGTCCCCCAGCACCAAGCTGCGGCTCACACAGATCAGCCACGGAACGTGTGATCCGCTTACCTCACTGCCTACAGAAGCCCTACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000215906.6
3UTR CCA 90 bp TCCTCTGGGCATGTAGGTCTTCTCTGTCTCCTCACTAGCACACACTaGCTTGGGTCATTGTCACGCAGTGCACACCTTTGTGCCATGACA +
Preference number: 1 (lower is better)
Translates to: SSGHVGLLCLLTSTH*LGSLSRSAHLCAMT
Trigger: TGTCATGGCACAAAGGTGTGCACTGCGTGACAATGACCCAAGCCAGTGTGTGCTAGTGAGGAGACAGAGAAGACCTACATGCCCAGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215906.6
3UTR CCA 90 bp AGCTTTGCAGGAAAGCCATGTTTAAAGAGTAGCCTCCAGTCCTACTaGCCCAATGCTTTTGCCATCAGGGACCTGACAAGGTTTAGAATG +
Preference number: 1 (lower is better)
Translates to: SFAGKPCLKSSLQSY*PNAFAIRDLTRFRM
Trigger: CATTCTAAACCTTGTCAGGTCCCTGATGGCAAAAGCATTGGGCCAGTAGGACTGGAGGCTACTCTTTAAACATGGCTTTCCTGCAAAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215906.6
3UTR CCA 90 bp ACACATCAGCTAACACAGGCTATTTCTAGAGTGAGTGCCTCAAACTaGTCTCCTGGGACCTTTTCCTTCGGGAAGAGATCCACATGTTCT +
Preference number: 1 (lower is better)
Translates to: THQLTQAISRVSASN*SPGTFSFGKRSTCS
Trigger: AGAACATGTGGATCTCTTCCCGAAGGAAAAGGTCCCAGGAGACCAGTTTGAGGCACTCACTCTAGAAATAGCCTGTGTTAGCTGATGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215906.6
3UTR CCA 90 bp GTTGTACCTCTTAGAAGCTGCTGTTTTCCATTTGGATCTAAACACTaGACCTGCACCTGCGACCAGCTGTATATTCCAAACCACTCCTCG +
Preference number: 1 (lower is better)
Translates to: VVPLRSCCFPFGSKH*TCTCDQLYIPNHSS
Trigger: CGAGGAGTGGTTTGGAATATACAGCTGGTCGCAGGTGCAGGTCCAGTGTTTAGATCCAAATGGAAAACAGCAGCTTCTAAGAGGTACAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215906.6
3UTR GCA 90 bp ATTTTACTCAAATGTAGACGTGCTCTTTGCACACTTGCTAGTACCTaGCTGGTGCATTTCAACTGTGTTTTCTTCCAACAGTTGTACCTC +
Preference number: 1 (lower is better)
Translates to: ILLKCRRALCTLAST*LVHFNCVFFQQLYL
Trigger: GAGGTACAACTGTTGGAAGAAAACACAGTTGAAATGCACCAGGCAGGTACTAGCAAGTGTGCAAAGAGCACGTCTACATTTGAGTAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215906.6
3UTR GCA 90 bp ACAAATATCTGTGTAGACATTTTACTCAAATGTAGACGTGCTCTTTaGACACTTGCTAGTACCTGCCTGGTGCATTTCAACTGTGTTTTC +
Preference number: 1 (lower is better)
Translates to: TNICVDILLKCRRAL*TLASTCLVHFNCVF
Trigger: GAAAACACAGTTGAAATGCACCAGGCAGGTACTAGCAAGTGTGCAAAGAGCACGTCTACATTTGAGTAAAATGTCTACACAGATATTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215906.6
3UTR TCA 90 bp ACGCAGAGCAGAGCAGTCACGATGTGTAGAAATCATGCACCTCAGTaGTTCTTTAACAAGATAATGAGTAAAAAGACTTCAGGTATGTTT +
Preference number: 1 (lower is better)
Translates to: TQSRAVTMCRNHAPQ*FFNKIMSKKTSGMF
Trigger: AAACATACCTGAAGTCTTTTTACTCATTATCTTGTTAAAGAATCACTGAGGTGCATGATTTCTACACATCGTGACTGCTCTGCTCTGCGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000215906.6
3UTR-3UTR GCA 90 bp GTACCTGCGCGGGCTGTTGGTTTTGTAAACGCAGAGCAGAGCAGTCACGATGTGGTCAGGTGTGGGGGCTaGAGACTGTCCCCCTGCCGT +
Preference number: 2 (lower is better)
Translates to: VPARAVGFVNAEQSSHDVVRCGG*RLSPCR
Trigger: ACGGCAGGGGGACAGTCTGCAGCCCCCACACCTGAC...CACATCGTGACTGCTCTGCTCTGCGTTTACAAAACCAACAGCCCGCGCAGGTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000215906.6
3UTR-3UTR CCA 90 bp GTACCTGCGCGGGCTGTTGGTTTTGTAAACGCAGAGCAGAGCAGTCACGATGTGCCCCCTGCCGTCAGGTaGCTGAAGGGTCCCCAGTGT +
Preference number: 2 (lower is better)
Translates to: VPARAVGFVNAEQSSHDVPPAVR*LKGPQC
Trigger: ACACTGGGGACCCTTCAGCCACCTGACGGCAGGGGG...CACATCGTGACTGCTCTGCTCTGCGTTTACAAAACCAACAGCCCGCGCAGGTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000215906.6
3UTR CAA 90 bp GTAAGCGGATCACACGTTCCGTGGCTGATCTGTGTGAGCCGCAGCTaGGTGCTGGGGGACACCAGCTTCAGCTTTGCAGGAAAGCCATGT +
Preference number: 2 (lower is better)
Translates to: VSGSHVPWLICVSRS*VLGDTSFSFAGKPC
Trigger: ACATGGCTTTCCTGCAAAGCTGAAGCTGGTGTCCCCCAGCACCAAGCTGCGGCTCACACAGATCAGCCACGGAACGTGTGATCCGCTTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000215906.6
3UTR-3UTR GCA 90 bp TGTTCTTCACAGGAGACCAGAAAACCAGCACAACGGCCACGGGTCCTCTGGGCAGAAGGGTCCCCAGTGTaGCAGCATCAGAGGCCAAGT +
Preference number: 2 (lower is better)
Translates to: CSSQETRKPAQRPRVLWAEGSPV*QHQRPS
Trigger: ACTTGGCCTCTGATGCTGGCACACTGGGGACCCTTC...TGCCCAGAGGACCCGTGGCCGTTGTGCTGGTTTTCTGGTCTCCTGTGAAGAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215906.6
3UTR-3UTR GCA 90 bp ATCACACGTTCCGTGGCTGATCTGTGTGAGCCGCAGCTTGGTGCTGGGGGACACGTCCTACTGGCCCAATaGTTTTGCCATCAGGGACCT +
Preference number: 2 (lower is better)
Translates to: ITRSVADLCEPQLGAGGHVLLAQ*FCHQGP
Trigger: AGGTCCCTGATGGCAAAAGCATTGGGCCAGTAGGAC...GTGTCCCCCAGCACCAAGCTGCGGCTCACACAGATCAGCCACGGAACGTGTGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000215906.6
3UTR-3UTR CCA 90 bp ATCCCCCTACAGCTCCTATCAGCCAACCTGGTGGCCTTAACGTTCATCACTGTGGCCGCAGCTTGGTGCTaGGGGACACCAGCTTCAGCT +
Preference number: 2 (lower is better)
Translates to: IPLQLLSANLVALTFITVAAAWC*GTPASA
Trigger: AGCTGAAGCTGGTGTCCCCCAGCACCAAGCTGCGGC...CACAGTGATGAACGTTAAGGCCACCAGGTTGGCTGATAGGAGCTGTAGGGGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000215906.6
3UTR-3UTR TCA 90 bp TGTTCTTCACAGGAGACCAGAAAACCAGCACAACGGCCACGGGTCCTCTGGGCAGGCTTCTGTAGGCAGTaGGGTAAGCGGATCACACGT +
Preference number: 2 (lower is better)
Translates to: CSSQETRKPAQRPRVLWAGFCRQ*GKRITR
Trigger: ACGTGTGATCCGCTTACCTCACTGCCTACAGAAGCC...TGCCCAGAGGACCCGTGGCCGTTGTGCTGGTTTTCTGGTCTCCTGTGAAGAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215906.6
3UTR-3UTR TCA 90 bp GTGAGTGCCTCAAACTGGTCTCCTGGGACCTTTTCCTTCGGGAAGAGATCCACAGCTGAGGCAGGTTTCTaGGCATGGAAACAACACCGG +
Preference number: 2 (lower is better)
Translates to: VSASNWSPGTFSFGKRSTAEAGF*AWKQHR
Trigger: CCGGTGTTGTTTCCATGCTCAGAAACCTGCCTCAGC...TGTGGATCTCTTCCCGAAGGAAAAGGTCCCAGGAGACCAGTTTGAGGCACTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215906.6
3UTR-3UTR GCA 90 bp AGACGTGCTCTTTGCACACTTGCTAGTACCTGCCTGGTGCATTTCAACTGTGTTTGCAGACTGTCCCCCTaGCGTCAGGTGGCTGAAGGG +
Preference number: 2 (lower is better)
Translates to: RRALCTLASTCLVHFNCVCRLSP*RQVAEG
Trigger: CCCTTCAGCCACCTGACGGCAGGGGGACAGTCTGCA...AACACAGTTGAAATGCACCAGGCAGGTACTAGCAAGTGTGCAAAGAGCACGTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000215906.6
3UTR CAA 90 bp GTAGGTCTTCTCTGTCTCCTCACTAGCACACACTGGCTTGGGTCATaGTCACGCAGTGCACACCTTTGTGCCATGACAAAGACACAGGGC +
Preference number: 2 (lower is better)
Translates to: VGLLCLLTSTHWLGS*SRSAHLCAMTKTQG
Trigger: GCCCTGTGTCTTTGTCATGGCACAAAGGTGTGCACTGCGTGACAATGACCCAAGCCAGTGTGTGCTAGTGAGGAGACAGAGAAGACCTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215906.6
3UTR-3UTR TCA 90 bp CTTGCTAGTACCTGCCTGGTGCATTTCAACTGTGTTTTCTTCCAACAGTTGTACCTGCCGTCAGGTGGCTaGAGGGTCCCCAGTGTGCCA +
Preference number: 2 (lower is better)
Translates to: LASTCLVHFNCVFFQQLYLPSGG*RVPSVP
Trigger: TGGCACACTGGGGACCCTTCAGCCACCTGACGGCAG...GTACAACTGTTGGAAGAAAACACAGTTGAAATGCACCAGGCAGGTACTAGCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215906.6
3UTR-3UTR TCA 90 bp TTTCCATTTGGATCTAAACACTGGACCTGCACCTGCGACCAGCTGTATATTCCACCAAATGTCGCTGGGTaGGCGCGGTCCTATCCCCCT +
Preference number: 2 (lower is better)
Translates to: FPFGSKHWTCTCDQLYIPPNVAG*ARSYPP
Trigger: AGGGGGATAGGACCGCGCTCACCCAGCGACATTTGG...TGGAATATACAGCTGGTCGCAGGTGCAGGTCCAGTGTTTAGATCCAAATGGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000215906.6
3UTR-3UTR CCA 90 bp GTTTTCCATTTGGATCTAAACACTGGACCTGCACCTGCGACCAGCTGTATATTCCACCCTGACTGTGTCTaGCAGCCCCTCCACCTGGCT +
Preference number: 2 (lower is better)
Translates to: VFHLDLNTGPAPATSCIFHPDCV*QPLHLA
Trigger: AGCCAGGTGGAGGGGCTGCCAGACACAGTCAGGGTG...GAATATACAGCTGGTCGCAGGTGCAGGTCCAGTGTTTAGATCCAAATGGAAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215906.6
3UTR-3UTR TCA 90 bp CTTGCTAGTACCTGCCTGGTGCATTTCAACTGTGTTTTCTTCCAACAGTTGTACCCTCCACCTGGCTACTaGAGCCAGTCAGGTGTGGGG +
Preference number: 2 (lower is better)
Translates to: LASTCLVHFNCVFFQQLYPPPGY*SQSGVG
Trigger: CCCCACACCTGACTGGCTTCAGTAGCCAGGTGGAGG...GTACAACTGTTGGAAGAAAACACAGTTGAAATGCACCAGGCAGGTACTAGCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215906.6
3UTR-3UTR TCA 90 bp GTACCTGCGCGGGCTGTTGGTTTTGTAAACGCAGAGCAGAGCAGTCACGATGTGAGGCTATTTCTAGAGTaGGTGCCTCAAACTGGTCTC +
Preference number: 2 (lower is better)
Translates to: VPARAVGFVNAEQSSHDVRLFLE*VPQTGL
Trigger: GAGACCAGTTTGAGGCACTCACTCTAGAAATAGCCT...CACATCGTGACTGCTCTGCTCTGCGTTTACAAAACCAACAGCCCGCGCAGGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215906.6
3UTR-3UTR CCA 90 bp TTTCCATTTGGATCTAAACACTGGACCTGCACCTGCGACCAGCTGTATATTCCACAGTATCCCTGGGCCTaGACACTGTGTGCCACCCTG +
Preference number: 2 (lower is better)
Translates to: FPFGSKHWTCTCDQLYIPQYPWA*TLCATL
Trigger: CAGGGTGGCACACAGTGTCCAGGCCCAGGGATACTG...TGGAATATACAGCTGGTCGCAGGTGCAGGTCCAGTGTTTAGATCCAAATGGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215906.6
3UTR-3UTR GCA 90 bp CTTGCTAGTACCTGCCTGGTGCATTTCAACTGTGTTTTCTTCCAACAGTTGTACGGCCTGGACACTGTGTaGCACCCTGACTGTGTCTGG +
Preference number: 2 (lower is better)
Translates to: LASTCLVHFNCVFFQQLYGLDTV*HPDCVW
Trigger: CCAGACACAGTCAGGGTGGCACACAGTGTCCAGGCC...GTACAACTGTTGGAAGAAAACACAGTTGAAATGCACCAGGCAGGTACTAGCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215906.6
3UTR-3UTR CCA 90 bp ATTTTACTCAAATGTAGACGTGCTCTTTGCACACTTGCTAGTACCTGCCTGGTGAACACCGGTAGGGACTaGACCGGACCACAGTCTGCC +
Preference number: 2 (lower is better)
Translates to: ILLKCRRALCTLASTCLVNTGRD*TGPQSA
Trigger: GGCAGACTGTGGTCCGGTCCAGTCCCTACCGGTGTT...CACCAGGCAGGTACTAGCAAGTGTGCAAAGAGCACGTCTACATTTGAGTAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215906.6
3UTR-3UTR CCA 90 bp AAACACTGGACCTGCACCTGCGACCAGCTGTATATTCCAAACCACTCCTCGGCTAGGGCACTAAGTCTCTaGTCACTCAAGGACCAATCA +
Preference number: 2 (lower is better)
Translates to: KHWTCTCDQLYIPNHSSARALSL*SLKDQS
Trigger: TGATTGGTCCTTGAGTGACCAGAGACTTAGTGCCCT...AGCCGAGGAGTGGTTTGGAATATACAGCTGGTCGCAGGTGCAGGTCCAGTGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215906.6
3UTR-3UTR CCA 90 bp GTTTTCCATTTGGATCTAAACACTGGACCTGCACCTGCGACCAGCTGTATATTCTTCCCCAAATGTCGCTaGGTGAGCGCGGTCCTATCC +
Preference number: 2 (lower is better)
Translates to: VFHLDLNTGPAPATSCIFFPKCR*VSAVLS
Trigger: GGATAGGACCGCGCTCACCCAGCGACATTTGGGGAA...GAATATACAGCTGGTCGCAGGTGCAGGTCCAGTGTTTAGATCCAAATGGAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215906.6
3UTR-3UTR CCA 90 bp GACGTGCTCTTTGCACACTTGCTAGTACCTGCCTGGTGCATTTCAACTGTGTTTAAGGCATCTCTAGTGTaGCTGGCCGGCTACGCTTTC +
Preference number: 2 (lower is better)
Translates to: DVLFAHLLVPAWCISTVFKASLV*LAGYAF
Trigger: GAAAGCGTAGCCGGCCAGCCACACTAGAGATGCCTT...AAACACAGTTGAAATGCACCAGGCAGGTACTAGCAAGTGTGCAAAGAGCACGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215906.6
3UTR-3UTR GCA 90 bp GACGTGCTCTTTGCACACTTGCTAGTACCTGCCTGGTGCATTTCAACTGTGTTTCACTGGACCTGCACCTaGGACCAGCTGTATATTCCA +
Preference number: 2 (lower is better)
Translates to: DVLFAHLLVPAWCISTVFHWTCT*DQLYIP
Trigger: TGGAATATACAGCTGGTCGCAGGTGCAGGTCCAGTG...AAACACAGTTGAAATGCACCAGGCAGGTACTAGCAAGTGTGCAAAGAGCACGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215906.6
3UTR-3UTR CCA 90 bp CTAGTACCTGCCTGGTGCATTTCAACTGTGTTTTCTTCCAACAGTTGTACCTCTGGATCACACGTTCCGTaGCTGATCTGTGTGAGCCGC +
Preference number: 2 (lower is better)
Translates to: LVPAWCISTVFSSNSCTSGSHVP*LICVSR
Trigger: GCGGCTCACACAGATCAGCCACGGAACGTGTGATCC...AGAGGTACAACTGTTGGAAGAAAACACAGTTGAAATGCACCAGGCAGGTACTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215906.6
3UTR-3UTR GCA 90 bp GTTTTCCATTTGGATCTAAACACTGGACCTGCACCTGCGACCAGCTGTATATTCCTGGCCCAATGCTTTTaGCATCAGGGACCTGACAAG +
Preference number: 2 (lower is better)
Translates to: VFHLDLNTGPAPATSCIFLAQCF*HQGPDK
Trigger: CTTGTCAGGTCCCTGATGGCAAAAGCATTGGGCCAG...GAATATACAGCTGGTCGCAGGTGCAGGTCCAGTGTTTAGATCCAAATGGAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215906.6
3UTR-3UTR GCA 90 bp GTCACGCAGTGCACACCTTTGTGCCATGACAAAGACACAGGGCCAACTCTTCCACTATTATTCCAGTTTTaGCAGAGAAAGGCTTTCCCC +
Preference number: 2 (lower is better)
Translates to: VTQCTPLCHDKDTGPTLPLLFQF*QRKAFP
Trigger: GGGGAAAGCCTTTCTCTGGCAAAACTGGAATAATAG...TGGAAGAGTTGGCCCTGTGTCTTTGTCATGGCACAAAGGTGTGCACTGCGTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215906.6
3UTR-3UTR CCA 90 bp TTTCCATTTGGATCTAAACACTGGACCTGCACCTGCGACCAGCTGTATATTCCAGTGAGTGCCTCAAACTaGTCTCCTGGGACCTTTTCC +
Preference number: 2 (lower is better)
Translates to: FPFGSKHWTCTCDQLYIPVSASN*SPGTFS
Trigger: GGAAAAGGTCCCAGGAGACCAGTTTGAGGCACTCAC...TGGAATATACAGCTGGTCGCAGGTGCAGGTCCAGTGTTTAGATCCAAATGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215906.6
3UTR-3UTR TCA 90 bp CTAGTACCTGCCTGGTGCATTTCAACTGTGTTTTCTTCCAACAGTTGTACCTCTCACACCTTTGTGCCATaGCAAAGACACAGGGCCAAC +
Preference number: 2 (lower is better)
Translates to: LVPAWCISTVFSSNSCTSHTFVP*QRHRAN
Trigger: GTTGGCCCTGTGTCTTTGTCATGGCACAAAGGTGTG...AGAGGTACAACTGTTGGAAGAAAACACAGTTGAAATGCACCAGGCAGGTACTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215906.6
3UTR-3UTR CCA 90 bp CTAGTACCTGCCTGGTGCATTTCAACTGTGTTTTCTTCCAACAGTTGTACCTCTCTCACTAGCACACACTaGCTTGGGTCATTGTCACGC +
Preference number: 2 (lower is better)
Translates to: LVPAWCISTVFSSNSCTSLTSTH*LGSLSR
Trigger: GCGTGACAATGACCCAAGCCAGTGTGTGCTAGTGAG...AGAGGTACAACTGTTGGAAGAAAACACAGTTGAAATGCACCAGGCAGGTACTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215906.6
3UTR-3UTR CCA 90 bp TCAAATGTAGACGTGCTCTTTGCACACTTGCTAGTACCTGCCTGGTGCATTTCATTTGGATCTAAACACTaGACCTGCACCTGCGACCAG +
Preference number: 2 (lower is better)
Translates to: SNVDVLFAHLLVPAWCISFGSKH*TCTCDQ
Trigger: CTGGTCGCAGGTGCAGGTCCAGTGTTTAGATCCAAA...TGAAATGCACCAGGCAGGTACTAGCAAGTGTGCAAAGAGCACGTCTACATTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215906.6
3UTR-3UTR TCA 90 bp ATTTTACTCAAATGTAGACGTGCTCTTTGCACACTTGCTAGTACCTGCCTGGTGATAAGAGCTTTCCGCTaGGGCAGGTTTCTGAGCATG +
Preference number: 2 (lower is better)
Translates to: ILLKCRRALCTLASTCLVIRAFR*GRFLSM
Trigger: CATGCTCAGAAACCTGCCTCAGCGGAAAGCTCTTAT...CACCAGGCAGGTACTAGCAAGTGTGCAAAGAGCACGTCTACATTTGAGTAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215906.6
3UTR-3UTR GCA 90 bp GACGTGCTCTTTGCACACTTGCTAGTACCTGCCTGGTGCATTTCAACTGTGTTTCACCAGCTTCAGCTTTaGAGGAAAGCCATGTTTAAA +
Preference number: 2 (lower is better)
Translates to: DVLFAHLLVPAWCISTVFHQLQL*RKAMFK
Trigger: TTTAAACATGGCTTTCCTGCAAAGCTGAAGCTGGTG...AAACACAGTTGAAATGCACCAGGCAGGTACTAGCAAGTGTGCAAAGAGCACGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215906.6
3UTR-3UTR CCA 90 bp TTTCAACTGTGTTTTCTTCCAACAGTTGTACCTCTTAGAAGCTGCTGTTTTCCAAGCCTCCAGTCCTACTaGCCCAATGCTTTTGCCATC +
Preference number: 2 (lower is better)
Translates to: FQLCFLPTVVPLRSCCFPSLQSY*PNAFAI
Trigger: GATGGCAAAAGCATTGGGCCAGTAGGACTGGAGGCT...TGGAAAACAGCAGCTTCTAAGAGGTACAACTGTTGGAAGAAAACACAGTTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000215906.6
3UTR-3UTR TCA 90 bp ACAGAAGACAGACTTACAAGGGCACTAAGTCTCTGGTCACTCAAGGACCAATCAAAGAGGGACCCGACATaGTATAAAATCCCAAATAAG +
Preference number: 2 (lower is better)
Translates to: TEDRLTRALSLWSLKDQSKRDPT*YKIPNK
Trigger: CTTATTTGGGATTTTATATCATGTCGGGTCCCTCTT...TGATTGGTCCTTGAGTGACCAGAGACTTAGTGCCCTTGTAAGTCTGTCTTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215906.6
3UTR-3UTR GCA 90 bp TTTCAACTGTGTTTTCTTCCAACAGTTGTACCTCTTAGAAGCTGCTGTTTTCCAGTCATTGTCACGCAGTaGACACCTTTGTGCCATGAC +
Preference number: 2 (lower is better)
Translates to: FQLCFLPTVVPLRSCCFPVIVTQ*TPLCHD
Trigger: GTCATGGCACAAAGGTGTGCACTGCGTGACAATGAC...TGGAAAACAGCAGCTTCTAAGAGGTACAACTGTTGGAAGAAAACACAGTTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215906.6
3UTR CAA 90 bp GCTAGTACCTGCCTGGTGCATTTCAACTGTGTTTTCTTCCAACAGTaGTACCTCTTAGAAGCTGCTGTTTTCCATTTGGATCTAAACACT +
Preference number: 2 (lower is better)
Translates to: ASTCLVHFNCVFFQQ*YLLEAAVFHLDLNT
Trigger: AGTGTTTAGATCCAAATGGAAAACAGCAGCTTCTAAGAGGTACAACTGTTGGAAGAAAACACAGTTGAAATGCACCAGGCAGGTACTAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215906.6
3UTR-3UTR CCA 90 bp TTTCAACTGTGTTTTCTTCCAACAGTTGTACCTCTTAGAAGCTGCTGTTTTCCAAGTTCTCTAGCTCTCTaGTTTGCAGTTTTTAGTTTT +
Preference number: 2 (lower is better)
Translates to: FQLCFLPTVVPLRSCCFPSSLAL*FAVFSF
Trigger: AAAACTAAAAACTGCAAACCAGAGAGCTAGAGAACT...TGGAAAACAGCAGCTTCTAAGAGGTACAACTGTTGGAAGAAAACACAGTTGAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000215906.6
3UTR CCA 72 bp CAGGTTTCTGAGCATGGAAACAACACCGGTAGGGACTaGACCGGACCACAGTCTGCCCAGGCCCCGCCTCGG +
Preference number: 3 (lower is better)
Translates to: QVSEHGNNTGRD*TGPQSAQAPPR
Trigger: CCGAGGCGGGGCCTGGGCAGACTGTGGTCCGGTCCAGTCCCTACCGGTGTTGTTTCCATGCTCAGAAACCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215906.6
3UTR-3UTR CAA 90 bp TGTTCTTCACAGGAGACCAGAAAACCAGCACAACGGCCACGGGTCCTCTGGGCATGTGTGAGCCGCAGCTaGGTGCTGGGGGACACCAGC +
Preference number: 3 (lower is better)
Translates to: CSSQETRKPAQRPRVLWACVSRS*VLGDTS
Trigger: GCTGGTGTCCCCCAGCACCAAGCTGCGGCTCACACA...TGCCCAGAGGACCCGTGGCCGTTGTGCTGGTTTTCTGGTCTCCTGTGAAGAACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000215906.6
3UTR CCA 72 bp TCTGTAGGCAGTGAGGTAAGCGGATCACACGTTCCGTaGCTGATCTGTGTGAGCCGCAGCTTGGTGCTGGGG +
Preference number: 3 (lower is better)
Translates to: SVGSEVSGSHVP*LICVSRSLVLG
Trigger: CCCCAGCACCAAGCTGCGGCTCACACAGATCAGCCACGGAACGTGTGATCCGCTTACCTCACTGCCTACAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215906.6
3UTR TCA 72 bp TTTGCCAGAGAAAGGCTTTCCCCAAATGTCGCTGGGTaGGCGCGGTCCTATCCCCCTACAGCTCCTATCAGC +
Preference number: 3 (lower is better)
Translates to: FARERLSPNVAG*ARSYPPTAPIS
Trigger: GCTGATAGGAGCTGTAGGGGGATAGGACCGCGCTCACCCAGCGACATTTGGGGAAAGCCTTTCTCTGGCAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000215906.6
3UTR-3UTR CAA 90 bp GTACCTGCGCGGGCTGTTGGTTTTGTAAACGCAGAGCAGAGCAGTCACGATGTGCTAGCACACACTGGCTaGGGTCATTGTCACGCAGTG +
Preference number: 3 (lower is better)
Translates to: VPARAVGFVNAEQSSHDVLAHTG*GHCHAV
Trigger: CACTGCGTGACAATGACCCAAGCCAGTGTGTGCTAG...CACATCGTGACTGCTCTGCTCTGCGTTTACAAAACCAACAGCCCGCGCAGGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215906.6
3UTR CCA 72 bp GGAAAGCCATGTTTAAAGAGTAGCCTCCAGTCCTACTaGCCCAATGCTTTTGCCATCAGGGACCTGACAAGG +
Preference number: 3 (lower is better)
Translates to: GKPCLKSSLQSY*PNAFAIRDLTR
Trigger: CCTTGTCAGGTCCCTGATGGCAAAAGCATTGGGCCAGTAGGACTGGAGGCTACTCTTTAAACATGGCTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215906.6
3UTR-3UTR CAA 90 bp TTTCCATTTGGATCTAAACACTGGACCTGCACCTGCGACCAGCTGTATATTCCACACTGGCTTGGGTCATaGTCACGCAGTGCACACCTT +
Preference number: 3 (lower is better)
Translates to: FPFGSKHWTCTCDQLYIPHWLGS*SRSAHL
Trigger: AAGGTGTGCACTGCGTGACAATGACCCAAGCCAGTG...TGGAATATACAGCTGGTCGCAGGTGCAGGTCCAGTGTTTAGATCCAAATGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215906.6
3UTR TCA 72 bp TCCTTTATTTATCTTCTGTTCCCCAGACATGTCACATaGATGCAGGTAGCTAGGTACCTGCGCGGGCTGTTG +
Preference number: 3 (lower is better)
Translates to: SFIYLLFPRHVT*MQVARYLRGLL
Trigger: CAACAGCCCGCGCAGGTACCTAGCTACCTGCATTCATGTGACATGTCTGGGGAACAGAAGATAAATAAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215906.6
3UTR GCA 72 bp TGTTTTCCATTTGGATCTAAACACTGGACCTGCACCTaGGACCAGCTGTATATTCCAAACCACTCCTCGGCT +
Preference number: 3 (lower is better)
Translates to: CFPFGSKHWTCT*DQLYIPNHSSA
Trigger: AGCCGAGGAGTGGTTTGGAATATACAGCTGGTCGCAGGTGCAGGTCCAGTGTTTAGATCCAAATGGAAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215906.6
3UTR-3UTR CAA 90 bp TCAAATGTAGACGTGCTCTTTGCACACTTGCTAGTACCTGCCTGGTGCATTTCAACGCAGTGCACACCTTaGTGCCATGACAAAGACACA +
Preference number: 3 (lower is better)
Translates to: SNVDVLFAHLLVPAWCISTQCTP*CHDKDT
Trigger: TGTGTCTTTGTCATGGCACAAAGGTGTGCACTGCGT...TGAAATGCACCAGGCAGGTACTAGCAAGTGTGCAAAGAGCACGTCTACATTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215906.6
3UTR CCA 72 bp CTTAGAAGCTGCTGTTTTCCATTTGGATCTAAACACTaGACCTGCACCTGCGACCAGCTGTATATTCCAAAC +
Preference number: 3 (lower is better)
Translates to: LRSCCFPFGSKH*TCTCDQLYIPN
Trigger: GTTTGGAATATACAGCTGGTCGCAGGTGCAGGTCCAGTGTTTAGATCCAAATGGAAAACAGCAGCTTCTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215906.6
3UTR CCA 72 bp GTAGACGTGCTCTTTGCACACTTGCTAGTACCTGCCTaGTGCATTTCAACTGTGTTTTCTTCCAACAGTTGT +
Preference number: 3 (lower is better)
Translates to: VDVLFAHLLVPA*CISTVFSSNSC
Trigger: ACAACTGTTGGAAGAAAACACAGTTGAAATGCACCAGGCAGGTACTAGCAAGTGTGCAAAGAGCACGTCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215906.6
3UTR-3UTR CAA 90 bp ATTTTACTCAAATGTAGACGTGCTCTTTGCACACTTGCTAGTACCTGCCTGGTGGCTGCTGTTTTCCATTaGGATCTAAACACTGGACCT +
Preference number: 3 (lower is better)
Translates to: ILLKCRRALCTLASTCLVAAVFH*DLNTGP
Trigger: AGGTCCAGTGTTTAGATCCAAATGGAAAACAGCAGC...CACCAGGCAGGTACTAGCAAGTGTGCAAAGAGCACGTCTACATTTGAGTAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215906.6
3UTR GCA 72 bp AAATGTAGACGTGCTCTTTGCACACTTGCTAGTACCTaGCTGGTGCATTTCAACTGTGTTTTCTTCCAACAG +
Preference number: 3 (lower is better)
Translates to: KCRRALCTLAST*LVHFNCVFFQQ
Trigger: CTGTTGGAAGAAAACACAGTTGAAATGCACCAGGCAGGTACTAGCAAGTGTGCAAAGAGCACGTCTACATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215906.6
3UTR GCA 72 bp TGTGTAGACATTTTACTCAAATGTAGACGTGCTCTTTaGACACTTGCTAGTACCTGCCTGGTGCATTTCAAC +
Preference number: 3 (lower is better)
Translates to: CVDILLKCRRAL*TLASTCLVHFN
Trigger: GTTGAAATGCACCAGGCAGGTACTAGCAAGTGTGCAAAGAGCACGTCTACATTTGAGTAAAATGTCTACACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215906.6
3UTR TCA 72 bp AGAGCAGTCACGATGTGTAGAAATCATGCACCTCAGTaGTTCTTTAACAAGATAATGAGTAAAAAGACTTCA +
Preference number: 3 (lower is better)
Translates to: RAVTMCRNHAPQ*FFNKIMSKKTS
Trigger: TGAAGTCTTTTTACTCATTATCTTGTTAAAGAATCACTGAGGTGCATGATTTCTACACATCGTGACTGCTCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR GCA 90 bp ATCACACGTTCCGTGGCTGATCTGTGTGAGCCGCAGCTTGGTGCTGGGGGACACGGCCCTCGTTGTGGGTaGAGCGCACGCACTCAGGGG +
Preference number: 4 (lower is better)
Translates to: ITRSVADLCEPQLGAGGHGPRCG*SARTQG
Trigger: CCCCTGAGTGCGTGCGCTGCACCCACAACGAGGGCC...GTGTCCCCCAGCACCAAGCTGCGGCTCACACAGATCAGCCACGGAACGTGTGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR GCA 90 bp ATCACACGTTCCGTGGCTGATCTGTGTGAGCCGCAGCTTGGTGCTGGGGGACACGGCCCTGCTCGCGGATaGCCTTGTGGATGCGGCCCA +
Preference number: 4 (lower is better)
Translates to: ITRSVADLCEPQLGAGGHGPARG*PCGCGP
Trigger: TGGGCCGCATCCACAAGGGCATCCGCGAGCAGGGCC...GTGTCCCCCAGCACCAAGCTGCGGCTCACACAGATCAGCCACGGAACGTGTGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR TCA 90 bp TGTTCTTCACAGGAGACCAGAAAACCAGCACAACGGCCACGGGTCCTCTGGGCATGGAGGGCCGGCTGTTaGGGTACCGGCCCTGCTCGC +
Preference number: 4 (lower is better)
Translates to: CSSQETRKPAQRPRVLWAWRAGC*GTGPAR
Trigger: GCGAGCAGGGCCGGTACCTCAACAGCCGGCCCTCCA...TGCCCAGAGGACCCGTGGCCGTTGTGCTGGTTTTCTGGTCTCCTGTGAAGAACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR TCA 90 bp ATCACACGTTCCGTGGCTGATCTGTGTGAGCCGCAGCTTGGTGCTGGGGGACACCCAAATGTCGCTGGGTaGGCGCGGTCCTATCCCCCT +
Preference number: 4 (lower is better)
Translates to: ITRSVADLCEPQLGAGGHPNVAG*ARSYPP
Trigger: AGGGGGATAGGACCGCGCTCACCCAGCGACATTTGG...GTGTCCCCCAGCACCAAGCTGCGGCTCACACAGATCAGCCACGGAACGTGTGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR CCA 90 bp ATCACACGTTCCGTGGCTGATCTGTGTGAGCCGCAGCTTGGTGCTGGGGGACACCACCCTGACTGTGTCTaGCAGCCCCTCCACCTGGCT +
Preference number: 4 (lower is better)
Translates to: ITRSVADLCEPQLGAGGHHPDCV*QPLHLA
Trigger: AGCCAGGTGGAGGGGCTGCCAGACACAGTCAGGGTG...GTGTCCCCCAGCACCAAGCTGCGGCTCACACAGATCAGCCACGGAACGTGTGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR GCA 90 bp ATCACACGTTCCGTGGCTGATCTGTGTGAGCCGCAGCTTGGTGCTGGGGGACACCGACAAGGTTGGCCGTaGCCACTGCTCCACTTTCCG +
Preference number: 4 (lower is better)
Translates to: ITRSVADLCEPQLGAGGHRQGWP*PLLHFP
Trigger: CGGAAAGTGGAGCAGTGGGCACGGCCAACCTTGTCG...GTGTCCCCCAGCACCAAGCTGCGGCTCACACAGATCAGCCACGGAACGTGTGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR GCA 90 bp TGTTCTTCACAGGAGACCAGAAAACCAGCACAACGGCCACGGGTCCTCTGGGCATTGAGGTACCGGCCCTaGTCGCGGATGCCCTTGTGG +
Preference number: 4 (lower is better)
Translates to: CSSQETRKPAQRPRVLWALRYRP*SRMPLW
Trigger: CCACAAGGGCATCCGCGAGCAGGGCCGGTACCTCAA...TGCCCAGAGGACCCGTGGCCGTTGTGCTGGTTTTCTGGTCTCCTGTGAAGAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR CCA 90 bp GTGAGTGCCTCAAACTGGTCTCCTGGGACCTTTTCCTTCGGGAAGAGATCCACACGGACTGGATGCCGGTaGCGATGCAGTCCCTCAGGC +
Preference number: 4 (lower is better)
Translates to: VSASNWSPGTFSFGKRSTRTGCR*RCSPSG
Trigger: GCCTGAGGGACTGCATCGCCACCGGCATCCAGTCCG...TGTGGATCTCTTCCCGAAGGAAAAGGTCCCAGGAGACCAGTTTGAGGCACTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR CCA 90 bp GTCACGCAGTGCACACCTTTGTGCCATGACAAAGACACAGGGCCAACTCTTCCACAGTCCCGCACGGACTaGATGCCGGTGGCGATGCAG +
Preference number: 4 (lower is better)
Translates to: VTQCTPLCHDKDTGPTLPQSRTD*MPVAMQ
Trigger: CTGCATCGCCACCGGCATCCAGTCCGTGCGGGACTG...TGGAAGAGTTGGCCCTGTGTCTTTGTCATGGCACAAAGGTGTGCACTGCGTGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR CCA 90 bp ATCACACGTTCCGTGGCTGATCTGTGTGAGCCGCAGCTTGGTGCTGGGGGACACACCAGGAGTAGCGCTTaGCGTACTCCTGCAGGTTGT +
Preference number: 4 (lower is better)
Translates to: ITRSVADLCEPQLGAGGHTRSSA*RTPAGC
Trigger: ACAACCTGCAGGAGTACGCCAAGCGCTACTCCTGGT...GTGTCCCCCAGCACCAAGCTGCGGCTCACACAGATCAGCCACGGAACGTGTGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR TCA 90 bp ATCACACGTTCCGTGGCTGATCTGTGTGAGCCGCAGCTTGGTGCTGGGGGACACCGGGAGGCTGCAGTTTaGGAAAGCTTTGTAGAGGGT +
Preference number: 4 (lower is better)
Translates to: ITRSVADLCEPQLGAGGHREAAV*ESFVEG
Trigger: ACCCTCTACAAAGCTTTCTCAAACTGCAGCCTCCCG...GTGTCCCCCAGCACCAAGCTGCGGCTCACACAGATCAGCCACGGAACGTGTGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR GCA 90 bp CAGGCCCAGTTTGGCAGTAGGGCTTCTGTAGGCAGTGAGGTAAGCGGATCACACTTGGCATCGGCAGCCTaGATGAGGGAGTTGACGGAG +
Preference number: 4 (lower is better)
Translates to: QAQFGSRASVGSEVSGSHLASAA*MRELTE
Trigger: CTCCGTCAACTCCCTCATGCAGGCTGCCGATGCCAA...GTGTGATCCGCTTACCTCACTGCCTACAGAAGCCCTACTGCCAAACTGGGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR CCA 90 bp GTGAGTGCCTCAAACTGGTCTCCTGGGACCTTTTCCTTCGGGAAGAGATCCACAGGGAGAAATAGGGCGTaGTGGGCAGGTCGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: VSASNWSPGTFSFGKRSTGRNRA*WAGRAG
Trigger: TCCTGCCCGACCTGCCCACCACGCCCTATTTCTCCC...TGTGGATCTCTTCCCGAAGGAAAAGGTCCCAGGAGACCAGTTTGAGGCACTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR GCA 90 bp GACGTGCTCTTTGCACACTTGCTAGTACCTGCCTGGTGCATTTCAACTGTGTTTCCCGCACGGACTGGATaGCGGTGGCGATGCAGTCCC +
Preference number: 4 (lower is better)
Translates to: DVLFAHLLVPAWCISTVFPARTG*RWRCSP
Trigger: GGGACTGCATCGCCACCGGCATCCAGTCCGTGCGGG...AAACACAGTTGAAATGCACCAGGCAGGTACTAGCAAGTGTGCAAAGAGCACGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR GCA 90 bp AAACACTGGACCTGCACCTGCGACCAGCTGTATATTCCAAACCACTCCTCGGCTGGCCTGGACACTGTGTaGCACCCTGACTGTGTCTGG +
Preference number: 4 (lower is better)
Translates to: KHWTCTCDQLYIPNHSSAGLDTV*HPDCVW
Trigger: CCAGACACAGTCAGGGTGGCACACAGTGTCCAGGCC...AGCCGAGGAGTGGTTTGGAATATACAGCTGGTCGCAGGTGCAGGTCCAGTGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR CCA 90 bp CAGGCCCAGTTTGGCAGTAGGGCTTCTGTAGGCAGTGAGGTAAGCGGATCACACCAAGCGGTACGTCCGTaGGCACTTCCTACAGTTCCT +
Preference number: 4 (lower is better)
Translates to: QAQFGSRASVGSEVSGSHQAVRP*ALPTVP
Trigger: AGGAACTGTAGGAAGTGCCCACGGACGTACCGCTTG...GTGTGATCCGCTTACCTCACTGCCTACAGAAGCCCTACTGCCAAACTGGGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR GCA 90 bp AAACACTGGACCTGCACCTGCGACCAGCTGTATATTCCAAACCACTCCTCGGCTGTTGGCCGTGCCCACTaGTCCACTTTCCGGCAAAAG +
Preference number: 4 (lower is better)
Translates to: KHWTCTCDQLYIPNHSSAVGRAH*STFRQK
Trigger: CTTTTGCCGGAAAGTGGAGCAGTGGGCACGGCCAAC...AGCCGAGGAGTGGTTTGGAATATACAGCTGGTCGCAGGTGCAGGTCCAGTGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR GCA 90 bp AAACACTGGACCTGCACCTGCGACCAGCTGTATATTCCAAACCACTCCTCGGCTATGAAATCAAGAGCCTaGCGTTCGGCCGCTGCGACG +
Preference number: 4 (lower is better)
Translates to: KHWTCTCDQLYIPNHSSAMKSRA*RSAAAT
Trigger: CGTCGCAGCGGCCGAACGGCAGGCTCTTGATTTCAT...AGCCGAGGAGTGGTTTGGAATATACAGCTGGTCGCAGGTGCAGGTCCAGTGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR CCA 90 bp ATCACACGTTCCGTGGCTGATCTGTGTGAGCCGCAGCTTGGTGCTGGGGGACACTCTGCTGAACCTTCATaGAACGCAGCATGCAGGAAA +
Preference number: 4 (lower is better)
Translates to: ITRSVADLCEPQLGAGGHSAEPS*NAACRK
Trigger: TTTCCTGCATGCTGCGTTCCATGAAGGTTCAGCAGA...GTGTCCCCCAGCACCAAGCTGCGGCTCACACAGATCAGCCACGGAACGTGTGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR CCA 90 bp TGTTCTTCACAGGAGACCAGAAAACCAGCACAACGGCCACGGGTCCTCTGGGCATCGCCGACTCCAGCATaGGAAATACTCTCATCGTCC +
Preference number: 4 (lower is better)
Translates to: CSSQETRKPAQRPRVLWASPTPA*EILSSS
Trigger: GGACGATGAGAGTATTTCCCATGCTGGAGTCGGCGA...TGCCCAGAGGACCCGTGGCCGTTGTGCTGGTTTTCTGGTCTCCTGTGAAGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR TCA 90 bp ATCCCCCTACAGCTCCTATCAGCCAACCTGGTGGCCTTAACGTTCATCACTGTGGGCTTCTGTAGGCAGTaGGGTAAGCGGATCACACGT +
Preference number: 4 (lower is better)
Translates to: IPLQLLSANLVALTFITVGFCRQ*GKRITR
Trigger: ACGTGTGATCCGCTTACCTCACTGCCTACAGAAGCC...CACAGTGATGAACGTTAAGGCCACCAGGTTGGCTGATAGGAGCTGTAGGGGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR GCA 90 bp GACGTGCTCTTTGCACACTTGCTAGTACCTGCCTGGTGCATTTCAACTGTGTTTGCCGGGGCTGCTCCCTaGCCACGTGATAACAGTACC +
Preference number: 4 (lower is better)
Translates to: DVLFAHLLVPAWCISTVFAGAAP*PRDNST
Trigger: GGTACTGTTATCACGTGGGCAGGGAGCAGCCCCGGC...AAACACAGTTGAAATGCACCAGGCAGGTACTAGCAAGTGTGCAAAGAGCACGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR GCA 90 bp GTTTTCCATTTGGATCTAAACACTGGACCTGCACCTGCGACCAGCTGTATATTCGGATGCCCTTGTGGATaGGGCCCATGCCGGACCAGG +
Preference number: 4 (lower is better)
Translates to: VFHLDLNTGPAPATSCIFGCPCG*GPCRTR
Trigger: CCTGGTCCGGCATGGGCCGCATCCACAAGGGCATCC...GAATATACAGCTGGTCGCAGGTGCAGGTCCAGTGTTTAGATCCAAATGGAAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR GCA 90 bp ACAGAAGACAGACTTACAAGGGCACTAAGTCTCTGGTCACTCAAGGACCAATCAAAGGCAGCGCCCTTCTaGCCAGCACTGGGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: TEDRLTRALSLWSLKDQSKAAPF*PALGLS
Trigger: GGAGAGCCCCAGTGCTGGGCAGAAGGGCGCTGCCTT...TGATTGGTCCTTGAGTGACCAGAGACTTAGTGCCCTTGTAAGTCTGTCTTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR GCA 90 bp GACGTGCTCTTTGCACACTTGCTAGTACCTGCCTGGTGCATTTCAACTGTGTTTTGCAGACTGTCCCCCTaGCGTCAGGTGGCTGAAGGG +
Preference number: 4 (lower is better)
Translates to: DVLFAHLLVPAWCISTVFCRLSP*RQVAEG
Trigger: CCCTTCAGCCACCTGACGGCAGGGGGACAGTCTGCA...AAACACAGTTGAAATGCACCAGGCAGGTACTAGCAAGTGTGCAAAGAGCACGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR GCA 90 bp GTTTTCCATTTGGATCTAAACACTGGACCTGCACCTGCGACCAGCTGTATATTCGTCAGGTGTGGGGGCTaGAGACTGTCCCCCTGCCGT +
Preference number: 4 (lower is better)
Translates to: VFHLDLNTGPAPATSCIFVRCGG*RLSPCR
Trigger: ACGGCAGGGGGACAGTCTGCAGCCCCCACACCTGAC...GAATATACAGCTGGTCGCAGGTGCAGGTCCAGTGTTTAGATCCAAATGGAAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR GCA 90 bp TGTTCTTCACAGGAGACCAGAAAACCAGCACAACGGCCACGGGTCCTCTGGGCAGTCATTGTCACGCAGTaGACACCTTTGTGCCATGAC +
Preference number: 4 (lower is better)
Translates to: CSSQETRKPAQRPRVLWAVIVTQ*TPLCHD
Trigger: GTCATGGCACAAAGGTGTGCACTGCGTGACAATGAC...TGCCCAGAGGACCCGTGGCCGTTGTGCTGGTTTTCTGGTCTCCTGTGAAGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR CCA 90 bp GTCACGCAGTGCACACCTTTGTGCCATGACAAAGACACAGGGCCAACTCTTCCATGGGGGAGTCCTTACTaGGCGTGTGAAGCAAGGTCA +
Preference number: 4 (lower is better)
Translates to: VTQCTPLCHDKDTGPTLPWGSPY*ACEARS
Trigger: TGACCTTGCTTCACACGCCCAGTAAGGACTCCCCCA...TGGAAGAGTTGGCCCTGTGTCTTTGTCATGGCACAAAGGTGTGCACTGCGTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR CCA 90 bp TTTCCATTTGGATCTAAACACTGGACCTGCACCTGCGACCAGCTGTATATTCCATCGCGGATGCCCTTGTaGATGCGGCCCATGCCGGAC +
Preference number: 4 (lower is better)
Translates to: FPFGSKHWTCTCDQLYIPSRMPL*MRPMPD
Trigger: GTCCGGCATGGGCCGCATCCACAAGGGCATCCGCGA...TGGAATATACAGCTGGTCGCAGGTGCAGGTCCAGTGTTTAGATCCAAATGGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR CCA 90 bp TCAAATGTAGACGTGCTCTTTGCACACTTGCTAGTACCTGCCTGGTGCATTTCACCCCCTGCCGTCAGGTaGCTGAAGGGTCCCCAGTGT +
Preference number: 4 (lower is better)
Translates to: SNVDVLFAHLLVPAWCISPPAVR*LKGPQC
Trigger: ACACTGGGGACCCTTCAGCCACCTGACGGCAGGGGG...TGAAATGCACCAGGCAGGTACTAGCAAGTGTGCAAAGAGCACGTCTACATTTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR CCA 90 bp GTCACGCAGTGCACACCTTTGTGCCATGACAAAGACACAGGGCCAACTCTTCCAAAGGCATCTCTAGTGTaGCTGGCCGGCTACGCTTTC +
Preference number: 4 (lower is better)
Translates to: VTQCTPLCHDKDTGPTLPKASLV*LAGYAF
Trigger: GAAAGCGTAGCCGGCCAGCCACACTAGAGATGCCTT...TGGAAGAGTTGGCCCTGTGTCTTTGTCATGGCACAAAGGTGTGCACTGCGTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR CCA 90 bp CAGGCCCAGTTTGGCAGTAGGGCTTCTGTAGGCAGTGAGGTAAGCGGATCACACTTTGGATCTAAACACTaGACCTGCACCTGCGACCAG +
Preference number: 4 (lower is better)
Translates to: QAQFGSRASVGSEVSGSHFGSKH*TCTCDQ
Trigger: CTGGTCGCAGGTGCAGGTCCAGTGTTTAGATCCAAA...GTGTGATCCGCTTACCTCACTGCCTACAGAAGCCCTACTGCCAAACTGGGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR TCA 90 bp ATCCCCCTACAGCTCCTATCAGCCAACCTGGTGGCCTTAACGTTCATCACTGTGGTCCCGGAGCAAAGATaGAATCAAGAGCCTGCCGTT +
Preference number: 4 (lower is better)
Translates to: IPLQLLSANLVALTFITVVPEQR*NQEPAV
Trigger: AACGGCAGGCTCTTGATTTCATCTTTGCTCCGGGAC...CACAGTGATGAACGTTAAGGCCACCAGGTTGGCTGATAGGAGCTGTAGGGGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR TCA 90 bp GTACCTGCGCGGGCTGTTGGTTTTGTAAACGCAGAGCAGAGCAGTCACGATGTGATAAGAGCTTTCCGCTaGGGCAGGTTTCTGAGCATG +
Preference number: 4 (lower is better)
Translates to: VPARAVGFVNAEQSSHDVIRAFR*GRFLSM
Trigger: CATGCTCAGAAACCTGCCTCAGCGGAAAGCTCTTAT...CACATCGTGACTGCTCTGCTCTGCGTTTACAAAACCAACAGCCCGCGCAGGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR GCA 90 bp AGCCAACCTGGTGGCCTTAACGTTCATCACTGTGGACTCAAAACACCTAAAACTGGATGCCGGTGGCGATaGAGTCCCTCAGGCCATCCA +
Preference number: 4 (lower is better)
Translates to: SQPGGLNVHHCGLKTPKTGCRWR*SPSGHP
Trigger: TGGATGGCCTGAGGGACTGCATCGCCACCGGCATCC...AGTTTTAGGTGTTTTGAGTCCACAGTGATGAACGTTAAGGCCACCAGGTTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR GCA 90 bp TCAAATGTAGACGTGCTCTTTGCACACTTGCTAGTACCTGCCTGGTGCATTTCATGTGGATGCGGCCCATaGCGGACCAGGAGTAGCGCT +
Preference number: 4 (lower is better)
Translates to: SNVDVLFAHLLVPAWCISCGCGP*RTRSSA
Trigger: AGCGCTACTCCTGGTCCGGCATGGGCCGCATCCACA...TGAAATGCACCAGGCAGGTACTAGCAAGTGTGCAAAGAGCACGTCTACATTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR GCA 90 bp GTACCTGCGCGGGCTGTTGGTTTTGTAAACGCAGAGCAGAGCAGTCACGATGTGCACATCATGTTTCTGTaGGTCCCGGGAGAAATAGGG +
Preference number: 4 (lower is better)
Translates to: VPARAVGFVNAEQSSHDVHIMFL*VPGEIG
Trigger: CCCTATTTCTCCCGGGACGCACAGAAACATGATGTG...CACATCGTGACTGCTCTGCTCTGCGTTTACAAAACCAACAGCCCGCGCAGGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR GCA 90 bp CAGGCCCAGTTTGGCAGTAGGGCTTCTGTAGGCAGTGAGGTAAGCGGATCACACTTCATTTTCCATCCTTaGGGGAGGCTGCAGTTTGAG +
Preference number: 4 (lower is better)
Translates to: QAQFGSRASVGSEVSGSHFIFHP*GRLQFE
Trigger: CTCAAACTGCAGCCTCCCGCAAGGATGGAAAATGAA...GTGTGATCCGCTTACCTCACTGCCTACAGAAGCCCTACTGCCAAACTGGGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR GCA 90 bp TGGGACCTTTTCCTTCGGGAAGAGATCCACATGTTCTTCACAGGAGACCAGAAACTGCCGTTCGGCCGCTaGGACGTTTGGATGCCACAA +
Preference number: 4 (lower is better)
Translates to: WDLFLREEIHMFFTGDQKLPFGR*DVWMPQ
Trigger: TTGTGGCATCCAAACGTCGCAGCGGCCGAACGGCAG...TTTCTGGTCTCCTGTGAAGAACATGTGGATCTCTTCCCGAAGGAAAAGGTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR CCA 90 bp AGACGTGCTCTTTGCACACTTGCTAGTACCTGCCTGGTGCATTTCAACTGTGTTAAGACCTCGGGCTTCTaGATGGAGGGCCGGCTGTTG +
Preference number: 4 (lower is better)
Translates to: RRALCTLASTCLVHFNCVKTSGF*MEGRLL
Trigger: CAACAGCCGGCCCTCCATCCAGAAGCCCGAGGTCTT...AACACAGTTGAAATGCACCAGGCAGGTACTAGCAAGTGTGCAAAGAGCACGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR CCA 90 bp TGTTCTTCACAGGAGACCAGAAAACCAGCACAACGGCCACGGGTCCTCTGGGCAACTTCCTACAGTTCCTaGGAACACAAACCCCCTGAT +
Preference number: 4 (lower is better)
Translates to: CSSQETRKPAQRPRVLWATSYSS*EHKPPD
Trigger: ATCAGGGGGTTTGTGTTCCCAGGAACTGTAGGAAGT...TGCCCAGAGGACCCGTGGCCGTTGTGCTGGTTTTCTGGTCTCCTGTGAAGAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR CCA 90 bp AAACACTGGACCTGCACCTGCGACCAGCTGTATATTCCAAACCACTCCTCGGCTAGCCTCCAGTCCTACTaGCCCAATGCTTTTGCCATC +
Preference number: 4 (lower is better)
Translates to: KHWTCTCDQLYIPNHSSASLQSY*PNAFAI
Trigger: GATGGCAAAAGCATTGGGCCAGTAGGACTGGAGGCT...AGCCGAGGAGTGGTTTGGAATATACAGCTGGTCGCAGGTGCAGGTCCAGTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR CCA 90 bp ATCCCCCTACAGCTCCTATCAGCCAACCTGGTGGCCTTAACGTTCATCACTGTGACCTGCGCGGGCTGTTaGTTTTGTAAACGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: IPLQLLSANLVALTFITVTCAGC*FCKRRA
Trigger: TGCTCTGCGTTTACAAAACCAACAGCCCGCGCAGGT...CACAGTGATGAACGTTAAGGCCACCAGGTTGGCTGATAGGAGCTGTAGGGGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000215906.6
3UTR CAA 72 bp ACACTGGCTTGGGTCATTGTCACGCAGTGCACACCTTaGTGCCATGACAAAGACACAGGGCCAACTCTTCCA +
Preference number: 4 (lower is better)
Translates to: TLAWVIVTQCTP*CHDKDTGPTLP
Trigger: TGGAAGAGTTGGCCCTGTGTCTTTGTCATGGCACAAAGGTGTGCACTGCGTGACAATGACCCAAGCCAGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215906.6
3UTR CAA 72 bp CTCTGTCTCCTCACTAGCACACACTGGCTTGGGTCATaGTCACGCAGTGCACACCTTTGTGCCATGACAAAG +
Preference number: 4 (lower is better)
Translates to: LCLLTSTHWLGS*SRSAHLCAMTK
Trigger: CTTTGTCATGGCACAAAGGTGTGCACTGCGTGACAATGACCCAAGCCAGTGTGTGCTAGTGAGGAGACAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR TCA 90 bp AGCCAACCTGGTGGCCTTAACGTTCATCACTGTGGACTCAAAACACCTAAAACTGGTACAGCTTCTGGTTaGGGCCCTCGTTGTGGGTGC +
Preference number: 4 (lower is better)
Translates to: SQPGGLNVHHCGLKTPKTGTASG*GPRCGC
Trigger: GCACCCACAACGAGGGCCTCAACCAGAAGCTGTACC...AGTTTTAGGTGTTTTGAGTCCACAGTGATGAACGTTAAGGCCACCAGGTTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR GCA 90 bp TGGGACCTTTTCCTTCGGGAAGAGATCCACATGTTCTTCACAGGAGACCAGAAAAGGGGGAGGCATGGCTaGCACCGATCCTCAGATACT +
Preference number: 4 (lower is better)
Translates to: WDLFLREEIHMFFTGDQKRGRHG*HRSSDT
Trigger: AGTATCTGAGGATCGGTGGCAGCCATGCCTCCCCCT...TTTCTGGTCTCCTGTGAAGAACATGTGGATCTCTTCCCGAAGGAAAAGGTCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR GCA 90 bp AAACACTGGACCTGCACCTGCGACCAGCTGTATATTCCAAACCACTCCTCGGCTGGCTCAGCACAGAGATaGACGCGTTCCCAAAAACAT +
Preference number: 4 (lower is better)
Translates to: KHWTCTCDQLYIPNHSSAGSAQR*TRSQKH
Trigger: ATGTTTTTGGGAACGCGTGCATCTCTGTGCTGAGCC...AGCCGAGGAGTGGTTTGGAATATACAGCTGGTCGCAGGTGCAGGTCCAGTGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR GCA 90 bp ATCCCCCTACAGCTCCTATCAGCCAACCTGGTGGCCTTAACGTTCATCACTGTGCTAAATGGCATCGGATaGGGATGTTGGTGGGTCCAT +
Preference number: 4 (lower is better)
Translates to: IPLQLLSANLVALTFITVLNGIG*GCWWVH
Trigger: ATGGACCCACCAACATCCGCATCCGATGCCATTTAG...CACAGTGATGAACGTTAAGGCCACCAGGTTGGCTGATAGGAGCTGTAGGGGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR CCA 90 bp AGCCAACCTGGTGGCCTTAACGTTCATCACTGTGGACTCAAAACACCTAAAACTAACACCGGTAGGGACTaGACCGGACCACAGTCTGCC +
Preference number: 4 (lower is better)
Translates to: SQPGGLNVHHCGLKTPKTNTGRD*TGPQSA
Trigger: GGCAGACTGTGGTCCGGTCCAGTCCCTACCGGTGTT...AGTTTTAGGTGTTTTGAGTCCACAGTGATGAACGTTAAGGCCACCAGGTTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR CCA 90 bp CTTGCTAGTACCTGCCTGGTGCATTTCAACTGTGTTTTCTTCCAACAGTTGTACGCCGCAGCTTGGTGCTaGGGGACACCAGCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: LASTCLVHFNCVFFQQLYAAAWC*GTPASA
Trigger: AGCTGAAGCTGGTGTCCCCCAGCACCAAGCTGCGGC...GTACAACTGTTGGAAGAAAACACAGTTGAAATGCACCAGGCAGGTACTAGCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR CCA 90 bp TGGGACCTTTTCCTTCGGGAAGAGATCCACATGTTCTTCACAGGAGACCAGAAATTCCCCAAATGTCGCTaGGTGAGCGCGGTCCTATCC +
Preference number: 4 (lower is better)
Translates to: WDLFLREEIHMFFTGDQKFPKCR*VSAVLS
Trigger: GGATAGGACCGCGCTCACCCAGCGACATTTGGGGAA...TTTCTGGTCTCCTGTGAAGAACATGTGGATCTCTTCCCGAAGGAAAAGGTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR TCA 90 bp GACGTGCTCTTTGCACACTTGCTAGTACCTGCCTGGTGCATTTCAACTGTGTTTGCCACAAATCCACCATaGAAACCACCCGTGGGCCAT +
Preference number: 4 (lower is better)
Translates to: DVLFAHLLVPAWCISTVFATNPP*KPPVGH
Trigger: ATGGCCCACGGGTGGTTTTCATGGTGGATTTGTGGC...AAACACAGTTGAAATGCACCAGGCAGGTACTAGCAAGTGTGCAAAGAGCACGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR TCA 90 bp CAGGCCCAGTTTGGCAGTAGGGCTTCTGTAGGCAGTGAGGTAAGCGGATCACACGACTTCAGGTATGTTTaGAATGTCTGCCTTTTCCTG +
Preference number: 4 (lower is better)
Translates to: QAQFGSRASVGSEVSGSHDFRYV*NVCLFL
Trigger: CAGGAAAAGGCAGACATTTCAAACATACCTGAAGTC...GTGTGATCCGCTTACCTCACTGCCTACAGAAGCCCTACTGCCAAACTGGGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR GCA 90 bp GTCACGCAGTGCACACCTTTGTGCCATGACAAAGACACAGGGCCAACTCTTCCAATCCTTGCGGGAGGCTaGAGTTTGAGAAAGCTTTGT +
Preference number: 4 (lower is better)
Translates to: VTQCTPLCHDKDTGPTLPILAGG*SLRKLC
Trigger: ACAAAGCTTTCTCAAACTGCAGCCTCCCGCAAGGAT...TGGAAGAGTTGGCCCTGTGTCTTTGTCATGGCACAAAGGTGTGCACTGCGTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR GCA 90 bp TTTCCATTTGGATCTAAACACTGGACCTGCACCTGCGACCAGCTGTATATTCCAGAAGGGTCCCCAGTGTaGCAGCATCAGAGGCCAAGT +
Preference number: 4 (lower is better)
Translates to: FPFGSKHWTCTCDQLYIPEGSPV*QHQRPS
Trigger: ACTTGGCCTCTGATGCTGGCACACTGGGGACCCTTC...TGGAATATACAGCTGGTCGCAGGTGCAGGTCCAGTGTTTAGATCCAAATGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR GCA 90 bp TGTTCTTCACAGGAGACCAGAAAACCAGCACAACGGCCACGGGTCCTCTGGGCACACCAGCTTCAGCTTTaGAGGAAAGCCATGTTTAAA +
Preference number: 4 (lower is better)
Translates to: CSSQETRKPAQRPRVLWAHQLQL*RKAMFK
Trigger: TTTAAACATGGCTTTCCTGCAAAGCTGAAGCTGGTG...TGCCCAGAGGACCCGTGGCCGTTGTGCTGGTTTTCTGGTCTCCTGTGAAGAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR CCA 90 bp ACAGAAGACAGACTTACAAGGGCACTAAGTCTCTGGTCACTCAAGGACCAATCAACTCGAGCGACATCTTaGGGGAGTCCTTACTGGGCG +
Preference number: 4 (lower is better)
Translates to: TEDRLTRALSLWSLKDQSTRATS*GSPYWA
Trigger: CGCCCAGTAAGGACTCCCCCAAGATGTCGCTCGAGT...TGATTGGTCCTTGAGTGACCAGAGACTTAGTGCCCTTGTAAGTCTGTCTTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR CCA 90 bp CTAGTACCTGCCTGGTGCATTTCAACTGTGTTTTCTTCCAACAGTTGTACCTCTTTGAGGCCCTCGTTGTaGGTGCAGCGCACGCACTCA +
Preference number: 4 (lower is better)
Translates to: LVPAWCISTVFSSNSCTSLRPSL*VQRTHS
Trigger: TGAGTGCGTGCGCTGCACCCACAACGAGGGCCTCAA...AGAGGTACAACTGTTGGAAGAAAACACAGTTGAAATGCACCAGGCAGGTACTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR CCA 90 bp TCAAATGTAGACGTGCTCTTTGCACACTTGCTAGTACCTGCCTGGTGCATTTCAAGAAATAGGGCGTGGTaGGCAGGTCGGGCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: SNVDVLFAHLLVPAWCISRNRAW*AGRAGR
Trigger: TCTTCCTGCCCGACCTGCCCACCACGCCCTATTTCT...TGAAATGCACCAGGCAGGTACTAGCAAGTGTGCAAAGAGCACGTCTACATTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR CCA 90 bp GACGTGCTCTTTGCACACTTGCTAGTACCTGCCTGGTGCATTTCAACTGTGTTTATCGGATGCGGATGTTaGTGGGTCCATAGTGCTCCG +
Preference number: 4 (lower is better)
Translates to: DVLFAHLLVPAWCISTVFIGCGC*WVHSAP
Trigger: CGGAGCACTATGGACCCACCAACATCCGCATCCGAT...AAACACAGTTGAAATGCACCAGGCAGGTACTAGCAAGTGTGCAAAGAGCACGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR CCA 90 bp AGACGTGCTCTTTGCACACTTGCTAGTACCTGCCTGGTGCATTTCAACTGTGTTGGCCGCTGCGACGTTTaGATGCCACAAATCCACCAT +
Preference number: 4 (lower is better)
Translates to: RRALCTLASTCLVHFNCVGRCDV*MPQIHH
Trigger: ATGGTGGATTTGTGGCATCCAAACGTCGCAGCGGCC...AACACAGTTGAAATGCACCAGGCAGGTACTAGCAAGTGTGCAAAGAGCACGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR CCA 90 bp TTTCCATTTGGATCTAAACACTGGACCTGCACCTGCGACCAGCTGTATATTCCAGGATCACACGTTCCGTaGCTGATCTGTGTGAGCCGC +
Preference number: 4 (lower is better)
Translates to: FPFGSKHWTCTCDQLYIPGSHVP*LICVSR
Trigger: GCGGCTCACACAGATCAGCCACGGAACGTGTGATCC...TGGAATATACAGCTGGTCGCAGGTGCAGGTCCAGTGTTTAGATCCAAATGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR CCA 90 bp CTAGTACCTGCCTGGTGCATTTCAACTGTGTTTTCTTCCAACAGTTGTACCTCTCGGCCACGGGTCCTCTaGGCATGTAGGTCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: LVPAWCISTVFSSNSCTSRPRVL*ACRSSL
Trigger: CAGAGAAGACCTACATGCCCAGAGGACCCGTGGCCG...AGAGGTACAACTGTTGGAAGAAAACACAGTTGAAATGCACCAGGCAGGTACTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR TCA 90 bp TTTCAACTGTGTTTTCTTCCAACAGTTGTACCTCTTAGAAGCTGCTGTTTTCCACTGCCGTCAGGTGGCTaGAGGGTCCCCAGTGTGCCA +
Preference number: 4 (lower is better)
Translates to: FQLCFLPTVVPLRSCCFPLPSGG*RVPSVP
Trigger: TGGCACACTGGGGACCCTTCAGCCACCTGACGGCAG...TGGAAAACAGCAGCTTCTAAGAGGTACAACTGTTGGAAGAAAACACAGTTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR GCA 90 bp TCAAATGTAGACGTGCTCTTTGCACACTTGCTAGTACCTGCCTGGTGCATTTCATCCGGCAAAAGTCACTaGAGTGGGGTGGAAGAGGCT +
Preference number: 4 (lower is better)
Translates to: SNVDVLFAHLLVPAWCISSGKSH*SGVEEA
Trigger: AGCCTCTTCCACCCCACTGCAGTGACTTTTGCCGGA...TGAAATGCACCAGGCAGGTACTAGCAAGTGTGCAAAGAGCACGTCTACATTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR GCA 90 bp GACGTGCTCTTTGCACACTTGCTAGTACCTGCCTGGTGCATTTCAACTGTGTTTCTGGCCCAATGCTTTTaGCATCAGGGACCTGACAAG +
Preference number: 4 (lower is better)
Translates to: DVLFAHLLVPAWCISTVFLAQCF*HQGPDK
Trigger: CTTGTCAGGTCCCTGATGGCAAAAGCATTGGGCCAG...AAACACAGTTGAAATGCACCAGGCAGGTACTAGCAAGTGTGCAAAGAGCACGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR CCA 90 bp AGACGTGCTCTTTGCACACTTGCTAGTACCTGCCTGGTGCATTTCAACTGTGTTGTCACTGCAGTGGGGTaGAAGAGGCTGGTTTTTGTC +
Preference number: 4 (lower is better)
Translates to: RRALCTLASTCLVHFNCVVTAVG*KRLVFV
Trigger: GACAAAAACCAGCCTCTTCCACCCCACTGCAGTGAC...AACACAGTTGAAATGCACCAGGCAGGTACTAGCAAGTGTGCAAAGAGCACGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR CCA 90 bp CTAGTACCTGCCTGGTGCATTTCAACTGTGTTTTCTTCCAACAGTTGTACCTCTGATGAACGACAAGGTTaGCCGTGCCCACTGCTCCAC +
Preference number: 4 (lower is better)
Translates to: LVPAWCISTVFSSNSCTSDERQG*PCPLLH
Trigger: GTGGAGCAGTGGGCACGGCCAACCTTGTCGTTCATC...AGAGGTACAACTGTTGGAAGAAAACACAGTTGAAATGCACCAGGCAGGTACTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR CCA 90 bp TGGGACCTTTTCCTTCGGGAAGAGATCCACATGTTCTTCACAGGAGACCAGAAAGGATGCGGATGTTGGTaGGTCCATAGTGCTCCGTTA +
Preference number: 4 (lower is better)
Translates to: WDLFLREEIHMFFTGDQKGCGCW*VHSAPL
Trigger: TAACGGAGCACTATGGACCCACCAACATCCGCATCC...TTTCTGGTCTCCTGTGAAGAACATGTGGATCTCTTCCCGAAGGAAAAGGTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR TCA 90 bp CTAGTACCTGCCTGGTGCATTTCAACTGTGTTTTCTTCCAACAGTTGTACCTCTGCTGAGGCAGGTTTCTaGGCATGGAAACAACACCGG +
Preference number: 4 (lower is better)
Translates to: LVPAWCISTVFSSNSCTSAEAGF*AWKQHR
Trigger: CCGGTGTTGTTTCCATGCTCAGAAACCTGCCTCAGC...AGAGGTACAACTGTTGGAAGAAAACACAGTTGAAATGCACCAGGCAGGTACTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR TCA 90 bp TTTCAACTGTGTTTTCTTCCAACAGTTGTACCTCTTAGAAGCTGCTGTTTTCCACCTCCACCTGGCTACTaGAGCCAGTCAGGTGTGGGG +
Preference number: 4 (lower is better)
Translates to: FQLCFLPTVVPLRSCCFPPPPGY*SQSGVG
Trigger: CCCCACACCTGACTGGCTTCAGTAGCCAGGTGGAGG...TGGAAAACAGCAGCTTCTAAGAGGTACAACTGTTGGAAGAAAACACAGTTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR TCA 90 bp TTTCCATTTGGATCTAAACACTGGACCTGCACCTGCGACCAGCTGTATATTCCACACACCTTTGTGCCATaGCAAAGACACAGGGCCAAC +
Preference number: 4 (lower is better)
Translates to: FPFGSKHWTCTCDQLYIPHTFVP*QRHRAN
Trigger: GTTGGCCCTGTGTCTTTGTCATGGCACAAAGGTGTG...TGGAATATACAGCTGGTCGCAGGTGCAGGTCCAGTGTTTAGATCCAAATGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR CCA 90 bp GACGTGCTCTTTGCACACTTGCTAGTACCTGCCTGGTGCATTTCAACTGTGTTTTACTCCTGCAGGTTGTaGTACAGCTTCTGGTTGAGG +
Preference number: 4 (lower is better)
Translates to: DVLFAHLLVPAWCISTVFYSCRL*YSFWLR
Trigger: CCTCAACCAGAAGCTGTACCACAACCTGCAGGAGTA...AAACACAGTTGAAATGCACCAGGCAGGTACTAGCAAGTGTGCAAAGAGCACGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR CCA 90 bp AGACGTGCTCTTTGCACACTTGCTAGTACCTGCCTGGTGCATTTCAACTGTGTTTCACACAGGATGGTCTaGAAGTTCCGTTCCAGCACT +
Preference number: 4 (lower is better)
Translates to: RRALCTLASTCLVHFNCVSHRMV*KFRSST
Trigger: AGTGCTGGAACGGAACTTCCAGACCATCCTGTGTGA...AACACAGTTGAAATGCACCAGGCAGGTACTAGCAAGTGTGCAAAGAGCACGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR CCA 90 bp TCAAATGTAGACGTGCTCTTTGCACACTTGCTAGTACCTGCCTGGTGCATTTCACTCACTAGCACACACTaGCTTGGGTCATTGTCACGC +
Preference number: 4 (lower is better)
Translates to: SNVDVLFAHLLVPAWCISLTSTH*LGSLSR
Trigger: GCGTGACAATGACCCAAGCCAGTGTGTGCTAGTGAG...TGAAATGCACCAGGCAGGTACTAGCAAGTGTGCAAAGAGCACGTCTACATTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR CCA 90 bp TCAAATGTAGACGTGCTCTTTGCACACTTGCTAGTACCTGCCTGGTGCATTTCAGTGAGTGCCTCAAACTaGTCTCCTGGGACCTTTTCC +
Preference number: 4 (lower is better)
Translates to: SNVDVLFAHLLVPAWCISVSASN*SPGTFS
Trigger: GGAAAAGGTCCCAGGAGACCAGTTTGAGGCACTCAC...TGAAATGCACCAGGCAGGTACTAGCAAGTGTGCAAAGAGCACGTCTACATTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR CCA 90 bp AAACACTGGACCTGCACCTGCGACCAGCTGTATATTCCAAACCACTCCTCGGCTTTGCTAGTACCTGCCTaGTGCATTTCAACTGTGTTT +
Preference number: 4 (lower is better)
Translates to: KHWTCTCDQLYIPNHSSALLVPA*CISTVF
Trigger: AAACACAGTTGAAATGCACCAGGCAGGTACTAGCAA...AGCCGAGGAGTGGTTTGGAATATACAGCTGGTCGCAGGTGCAGGTCCAGTGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR TCA 90 bp GTTTTCCATTTGGATCTAAACACTGGACCTGCACCTGCGACCAGCTGTATATTCCCCAGACATGTCACATaGATGCAGGTAGCTAGGTAC +
Preference number: 4 (lower is better)
Translates to: VFHLDLNTGPAPATSCIFPRHVT*MQVARY
Trigger: GTACCTAGCTACCTGCATTCATGTGACATGTCTGGG...GAATATACAGCTGGTCGCAGGTGCAGGTCCAGTGTTTAGATCCAAATGGAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR GCA 90 bp CTTGCTAGTACCTGCCTGGTGCATTTCAACTGTGTTTTCTTCCAACAGTTGTACGTCCTACTGGCCCAATaGTTTTGCCATCAGGGACCT +
Preference number: 4 (lower is better)
Translates to: LASTCLVHFNCVFFQQLYVLLAQ*FCHQGP
Trigger: AGGTCCCTGATGGCAAAAGCATTGGGCCAGTAGGAC...GTACAACTGTTGGAAGAAAACACAGTTGAAATGCACCAGGCAGGTACTAGCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR GCA 90 bp CTTGCTAGTACCTGCCTGGTGCATTTCAACTGTGTTTTCTTCCAACAGTTGTACCACTGGACCTGCACCTaGGACCAGCTGTATATTCCA +
Preference number: 4 (lower is better)
Translates to: LASTCLVHFNCVFFQQLYHWTCT*DQLYIP
Trigger: TGGAATATACAGCTGGTCGCAGGTGCAGGTCCAGTG...GTACAACTGTTGGAAGAAAACACAGTTGAAATGCACCAGGCAGGTACTAGCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR GCA 90 bp TGGGACCTTTTCCTTCGGGAAGAGATCCACATGTTCTTCACAGGAGACCAGAAATGTAGACGTGCTCTTTaGACACTTGCTAGTACCTGC +
Preference number: 4 (lower is better)
Translates to: WDLFLREEIHMFFTGDQKCRRAL*TLASTC
Trigger: GCAGGTACTAGCAAGTGTGCAAAGAGCACGTCTACA...TTTCTGGTCTCCTGTGAAGAACATGTGGATCTCTTCCCGAAGGAAAAGGTCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR CCA 90 bp TCAAATGTAGACGTGCTCTTTGCACACTTGCTAGTACCTGCCTGGTGCATTTCACAAAAGTCACTGCAGTaGGGTGGAAGAGGCTGGTTT +
Preference number: 4 (lower is better)
Translates to: SNVDVLFAHLLVPAWCISQKSLQ*GGRGWF
Trigger: AAACCAGCCTCTTCCACCCCACTGCAGTGACTTTTG...TGAAATGCACCAGGCAGGTACTAGCAAGTGTGCAAAGAGCACGTCTACATTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR CCA 90 bp CTAGTACCTGCCTGGTGCATTTCAACTGTGTTTTCTTCCAACAGTTGTACCTCTTTGTGGTACAGCTTCTaGTTGAGGCCCTCGTTGTGG +
Preference number: 4 (lower is better)
Translates to: LVPAWCISTVFSSNSCTSLWYSF*LRPSLW
Trigger: CCACAACGAGGGCCTCAACCAGAAGCTGTACCACAA...AGAGGTACAACTGTTGGAAGAAAACACAGTTGAAATGCACCAGGCAGGTACTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR TCA 90 bp TTTCCATTTGGATCTAAACACTGGACCTGCACCTGCGACCAGCTGTATATTCCATGCCGTCGGTCCCTGTaGAAGGATTTGTTTAGGAAA +
Preference number: 4 (lower is better)
Translates to: FPFGSKHWTCTCDQLYIPCRRSL*KDLFRK
Trigger: TTTCCTAAACAAATCCTTTCACAGGGACCGACGGCA...TGGAATATACAGCTGGTCGCAGGTGCAGGTCCAGTGTTTAGATCCAAATGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR TCA 90 bp TTTCCATTTGGATCTAAACACTGGACCTGCACCTGCGACCAGCTGTATATTCCAAGGCTATTTCTAGAGTaGGTGCCTCAAACTGGTCTC +
Preference number: 4 (lower is better)
Translates to: FPFGSKHWTCTCDQLYIPRLFLE*VPQTGL
Trigger: GAGACCAGTTTGAGGCACTCACTCTAGAAATAGCCT...TGGAATATACAGCTGGTCGCAGGTGCAGGTCCAGTGTTTAGATCCAAATGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR GCA 90 bp TTTCCATTTGGATCTAAACACTGGACCTGCACCTGCGACCAGCTGTATATTCCAGCTGCGACGTTTGGATaGCACAAATCCACCATGAAA +
Preference number: 4 (lower is better)
Translates to: FPFGSKHWTCTCDQLYIPAATFG*HKSTMK
Trigger: TTTCATGGTGGATTTGTGGCATCCAAACGTCGCAGC...TGGAATATACAGCTGGTCGCAGGTGCAGGTCCAGTGTTTAGATCCAAATGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR GCA 90 bp TGGGACCTTTTCCTTCGGGAAGAGATCCACATGTTCTTCACAGGAGACCAGAAACTATTATTCCAGTTTTaGCAGAGAAAGGCTTTCCCC +
Preference number: 4 (lower is better)
Translates to: WDLFLREEIHMFFTGDQKLLFQF*QRKAFP
Trigger: GGGGAAAGCCTTTCTCTGGCAAAACTGGAATAATAG...TTTCTGGTCTCCTGTGAAGAACATGTGGATCTCTTCCCGAAGGAAAAGGTCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR CCA 90 bp ATCCCCCTACAGCTCCTATCAGCCAACCTGGTGGCCTTAACGTTCATCACTGTGAGTTCTCTAGCTCTCTaGTTTGCAGTTTTTAGTTTT +
Preference number: 4 (lower is better)
Translates to: IPLQLLSANLVALTFITVSSLAL*FAVFSF
Trigger: AAAACTAAAAACTGCAAACCAGAGAGCTAGAGAACT...CACAGTGATGAACGTTAAGGCCACCAGGTTGGCTGATAGGAGCTGTAGGGGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR TCA 90 bp AGACGTGCTCTTTGCACACTTGCTAGTACCTGCCTGGTGCATTTCAACTGTGTTAAGAGGGACCCGACATaGTATAAAATCCCAAATAAG +
Preference number: 4 (lower is better)
Translates to: RRALCTLASTCLVHFNCVKRDPT*YKIPNK
Trigger: CTTATTTGGGATTTTATATCATGTCGGGTCCCTCTT...AACACAGTTGAAATGCACCAGGCAGGTACTAGCAAGTGTGCAAAGAGCACGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR GCA 90 bp ATTTTACTCAAATGTAGACGTGCTCTTTGCACACTTGCTAGTACCTGCCTGGTGACACTTGCTAGTACCTaGCTGGTGCATTTCAACTGT +
Preference number: 4 (lower is better)
Translates to: ILLKCRRALCTLASTCLVTLAST*LVHFNC
Trigger: ACAGTTGAAATGCACCAGGCAGGTACTAGCAAGTGT...CACCAGGCAGGTACTAGCAAGTGTGCAAAGAGCACGTCTACATTTGAGTAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR CCA 90 bp GTTTTCCATTTGGATCTAAACACTGGACCTGCACCTGCGACCAGCTGTATATTCTGGGGTGGAAGAGGCTaGTTTTTGTCACATTATCAA +
Preference number: 4 (lower is better)
Translates to: VFHLDLNTGPAPATSCIFWGGRG*FLSHYQ
Trigger: TTGATAATGTGACAAAAACCAGCCTCTTCCACCCCA...GAATATACAGCTGGTCGCAGGTGCAGGTCCAGTGTTTAGATCCAAATGGAAAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR CCA 90 bp CTTGCTAGTACCTGCCTGGTGCATTTCAACTGTGTTTTCTTCCAACAGTTGTACGTTTTCAGACCTAAATaGCATCGGATGCGGATGTTG +
Preference number: 4 (lower is better)
Translates to: LASTCLVHFNCVFFQQLYVFRPK*HRMRML
Trigger: CAACATCCGCATCCGATGCCATTTAGGTCTGAAAAC...GTACAACTGTTGGAAGAAAACACAGTTGAAATGCACCAGGCAGGTACTAGCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR TCA 90 bp TTTCAACTGTGTTTTCTTCCAACAGTTGTACCTCTTAGAAGCTGCTGTTTTCCATCCTTACTGGGCGTGTaGAGCAAGGTCAGACAATCA +
Preference number: 4 (lower is better)
Translates to: FQLCFLPTVVPLRSCCFPSLLGV*SKVRQS
Trigger: TGATTGTCTGACCTTGCTTCACACGCCCAGTAAGGA...TGGAAAACAGCAGCTTCTAAGAGGTACAACTGTTGGAAGAAAACACAGTTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR GCA 90 bp AGCCAACCTGGTGGCCTTAACGTTCATCACTGTGGACTCAAAACACCTAAAACTGTACCTCTTAGAAGCTaGTGTTTTCCATTTGGATCT +
Preference number: 4 (lower is better)
Translates to: SQPGGLNVHHCGLKTPKTVPLRS*CFPFGS
Trigger: AGATCCAAATGGAAAACAGCAGCTTCTAAGAGGTAC...AGTTTTAGGTGTTTTGAGTCCACAGTGATGAACGTTAAGGCCACCAGGTTGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR CCA 90 bp TTTCAACTGTGTTTTCTTCCAACAGTTGTACCTCTTAGAAGCTGCTGTTTTCCACTCAAACTGGTCTCCTaGGACCTTTTCCTTCGGGAA +
Preference number: 4 (lower is better)
Translates to: FQLCFLPTVVPLRSCCFPLKLVS*DLFLRE
Trigger: TTCCCGAAGGAAAAGGTCCCAGGAGACCAGTTTGAG...TGGAAAACAGCAGCTTCTAAGAGGTACAACTGTTGGAAGAAAACACAGTTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR CCA 90 bp TTTCAACTGTGTTTTCTTCCAACAGTTGTACCTCTTAGAAGCTGCTGTTTTCCACAAACTCACACAGGATaGTCTGGAAGTTCCGTTCCA +
Preference number: 4 (lower is better)
Translates to: FQLCFLPTVVPLRSCCFPQTHTG*SGSSVP
Trigger: TGGAACGGAACTTCCAGACCATCCTGTGTGAGTTTG...TGGAAAACAGCAGCTTCTAAGAGGTACAACTGTTGGAAGAAAACACAGTTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR CCA 90 bp TTTCAACTGTGTTTTCTTCCAACAGTTGTACCTCTTAGAAGCTGCTGTTTTCCAAGGGCACTAAGTCTCTaGTCACTCAAGGACCAATCA +
Preference number: 4 (lower is better)
Translates to: FQLCFLPTVVPLRSCCFPRALSL*SLKDQS
Trigger: TGATTGGTCCTTGAGTGACCAGAGACTTAGTGCCCT...TGGAAAACAGCAGCTTCTAAGAGGTACAACTGTTGGAAGAAAACACAGTTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215906.6
3UTR CAA 72 bp AAAACAGAAACTTTGGTCAGATCTATTATTCCAGTTTaGCCAGAGAAAGGCTTTCCCCAAATGTCGCTGGGT +
Preference number: 4 (lower is better)
Translates to: KTETLVRSIIPV*PEKGFPQMSLG
Trigger: ACCCAGCGACATTTGGGGAAAGCCTTTCTCTGGCAAAACTGGAATAATAGATCTGACCAAAGTTTCTGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215906.6
3UTR CAA 72 bp ACATTTTACTCAAATGTAGACGTGCTCTTTGCACACTaGCTAGTACCTGCCTGGTGCATTTCAACTGTGTTT +
Preference number: 4 (lower is better)
Translates to: TFYSNVDVLFAH*LVPAWCISTVF
Trigger: AAACACAGTTGAAATGCACCAGGCAGGTACTAGCAAGTGTGCAAAGAGCACGTCTACATTTGAGTAAAATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS GCA 90 bp ACCTCGGGCTTCTGGATGGAGGGCCGGCTGTTGAGGTACCGGCCCTaGTCGCGGATGCCCTTGTGGATGCGGCCCATGCCGGACCAGGAG +
Preference number: 5 (lower is better)
Translates to: TSGFWMEGRLLRYRP*SRMPLWMRPMPDQE
Trigger: CTCCTGGTCCGGCATGGGCCGCATCCACAAGGGCATCCGCGAGCAGGGCCGGTACCTCAACAGCCGGCCCTCCATCCAGAAGCCCGAGGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS CCA 90 bp CAGGCCACAGTGATGACAGCGGTGGTGTCGCAGTCCCGCACGGACTaGATGCCGGTGGCGATGCAGTCCCTCAGGCCATCCAGCGACCAG +
Preference number: 5 (lower is better)
Translates to: QATVMTAVVSQSRTD*MPVAMQSLRPSSDQ
Trigger: CTGGTCGCTGGATGGCCTGAGGGACTGCATCGCCACCGGCATCCAGTCCGTGCGGGACTGCGACACCACCGCTGTCATCACTGTGGCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS TCA 90 bp ACCAGCCACTCGAGCGACATCTTGGGGGAGTCCTTACTGGGCGTGTaGAGCAAGGTCAGACAATCAGTCCTCGGGGGTCCCAAGGGCGCC +
Preference number: 5 (lower is better)
Translates to: TSHSSDILGESLLGV*SKVRQSVLGGPKGA
Trigger: GGCGCCCTTGGGACCCCCGAGGACTGATTGTCTGACCTTGCTTCACACGCCCAGTAAGGACTCCCCCAAGATGTCGCTCGAGTGGCTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS TCA 90 bp AGTAGCGCTTGGCGTACTCCTGCAGGTTGTGGTACAGCTTCTGGTTaGGGCCCTCGTTGTGGGTGCAGCGCACGCACTCAGGGGACTGGC +
Preference number: 5 (lower is better)
Translates to: SSAWRTPAGCGTASG*GPRCGCSARTQGTG
Trigger: GCCAGTCCCCTGAGTGCGTGCGCTGCACCCACAACGAGGGCCTCAACCAGAAGCTGTACCACAACCTGCAGGAGTACGCCAAGCGCTACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS CCA 90 bp TCCAGGCCACCAGCCACTCGAGCGACATCTTGGGGGAGTCCTTACTaGGCGTGTGAAGCAAGGTCAGACAATCAGTCCTCGGGGGTCCCA +
Preference number: 5 (lower is better)
Translates to: SRPPATRATSWGSPY*ACEARSDNQSSGVP
Trigger: TGGGACCCCCGAGGACTGATTGTCTGACCTTGCTTCACACGCCCAGTAAGGACTCCCCCAAGATGTCGCTCGAGTGGCTGGTGGCCTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR CAA 90 bp GTACCTGCGCGGGCTGTTGGTTTTGTAAACGCAGAGCAGAGCAGTCACGATGTGTGCTCGCGGATGCCCTaGTGGATGCGGCCCATGCCG +
Preference number: 5 (lower is better)
Translates to: VPARAVGFVNAEQSSHDVCSRMP*WMRPMP
Trigger: CGGCATGGGCCGCATCCACAAGGGCATCCGCGAGCA...CACATCGTGACTGCTCTGCTCTGCGTTTACAAAACCAACAGCCCGCGCAGGTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS CCA 90 bp CAGTCTGCCCAGGCCCCGCCTCGGCCCTTCTCGCCGACTCCAGCATaGGAAATACTCTCATCGTCCCGGAGCAAAGATGAAATCAAGAGC +
Preference number: 5 (lower is better)
Translates to: QSAQAPPRPFSPTPA*EILSSSRSKDEIKS
Trigger: GCTCTTGATTTCATCTTTGCTCCGGGACGATGAGAGTATTTCCCATGCTGGAGTCGGCGAGAAGGGCCGAGGCGGGGCCTGGGCAGACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR CAA 90 bp CAGGCCCAGTTTGGCAGTAGGGCTTCTGTAGGCAGTGAGGTAAGCGGATCACACCCATTCTGCAGCCCGTaGGCATCGGCAGCCTGCATG +
Preference number: 5 (lower is better)
Translates to: QAQFGSRASVGSEVSGSHPFCSP*ASAACM
Trigger: CATGCAGGCTGCCGATGCCAACGGGCTGCAGAATGG...GTGTGATCCGCTTACCTCACTGCCTACAGAAGCCCTACTGCCAAACTGGGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR CAA 90 bp GTGAGTGCCTCAAACTGGTCTCCTGGGACCTTTTCCTTCGGGAAGAGATCCACAATGGAGGGCCGGCTGTaGAGGTACCGGCCCTGCTCG +
Preference number: 5 (lower is better)
Translates to: VSASNWSPGTFSFGKRSTMEGRL*RYRPCS
Trigger: CGAGCAGGGCCGGTACCTCAACAGCCGGCCCTCCAT...TGTGGATCTCTTCCCGAAGGAAAAGGTCCCAGGAGACCAGTTTGAGGCACTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS TCA 90 bp CCTGCCGTTCGGCCGCTGCGACGTTTGGATGCCACAAATCCACCATaGAAACCACCCGTGGGCCATCCTCTGCTGAACCTTCATGGAACG +
Preference number: 5 (lower is better)
Translates to: PAVRPLRRLDATNPP*KPPVGHPLLNLHGT
Trigger: CGTTCCATGAAGGTTCAGCAGAGGATGGCCCACGGGTGGTTTTCATGGTGGATTTGTGGCATCCAAACGTCGCAGCGGCCGAACGGCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR CAA 90 bp GTCACGCAGTGCACACCTTTGTGCCATGACAAAGACACAGGGCCAACTCTTCCATGTGTGAGCCGCAGCTaGGTGCTGGGGGACACCAGC +
Preference number: 5 (lower is better)
Translates to: VTQCTPLCHDKDTGPTLPCVSRS*VLGDTS
Trigger: GCTGGTGTCCCCCAGCACCAAGCTGCGGCTCACACA...TGGAAGAGTTGGCCCTGTGTCTTTGTCATGGCACAAAGGTGTGCACTGCGTGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS TCA 90 bp GCCGACTCCAGCATGGGAAATACTCTCATCGTCCCGGAGCAAAGATaGAATCAAGAGCCTGCCGTTCGGCCGCTGCGACGTTTGGATGCC +
Preference number: 5 (lower is better)
Translates to: ADSSMGNTLIVPEQR*NQEPAVRPLRRLDA
Trigger: GGCATCCAAACGTCGCAGCGGCCGAACGGCAGGCTCTTGATTTCATCTTTGCTCCGGGACGATGAGAGTATTTCCCATGCTGGAGTCGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS GCA 90 bp GATGGTCTGGAAGTTCCGTTCCAGCACTTCCACATCATGTTTCTGTaGGTCCCGGGAGAAATAGGGCGTGGTGGGCAGGTCGGGCAGGAA +
Preference number: 5 (lower is better)
Translates to: DGLEVPFQHFHIMFL*VPGEIGRGGQVGQE
Trigger: TTCCTGCCCGACCTGCCCACCACGCCCTATTTCTCCCGGGACGCACAGAAACATGATGTGGAAGTGCTGGAACGGAACTTCCAGACCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS CCA 90 bp CGATCCTCAGATACTGCCAGGGGCGGCATTGATGAACGACAAGGTTaGCCGTGCCCACTGCTCCACTTTCCGGCAAAAGTCACTGCAGTG +
Preference number: 5 (lower is better)
Translates to: RSSDTARGGIDERQG*PCPLLHFPAKVTAV
Trigger: CACTGCAGTGACTTTTGCCGGAAAGTGGAGCAGTGGGCACGGCCAACCTTGTCGTTCATCAATGCCGCCCCTGGCAGTATCTGAGGATCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS GCA 90 bp TCGTCCCGGAGCAAAGATGAAATCAAGAGCCTGCCGTTCGGCCGCTaGGACGTTTGGATGCCACAAATCCACCATGAAAACCACCCGTGG +
Preference number: 5 (lower is better)
Translates to: SSRSKDEIKSLPFGR*DVWMPQIHHENHPW
Trigger: CCACGGGTGGTTTTCATGGTGGATTTGTGGCATCCAAACGTCGCAGCGGCCGAACGGCAGGCTCTTGATTTCATCTTTGCTCCGGGACGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS CCA 90 bp GTTCCCAATACAGGTCCGAAGGCTTCCGAGCAAGCGGTACGTCCGTaGGCACTTCCTACAGTTCCTGGGAACACAAACCCCCTGATTGAC +
Preference number: 5 (lower is better)
Translates to: VPNTGPKASEQAVRP*ALPTVPGNTNPLID
Trigger: GTCAATCAGGGGGTTTGTGTTCCCAGGAACTGTAGGAAGTGCCCACGGACGTACCGCTTGCTCGGAAGCCTTCGGACCTGTATTGGGAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR CAA 90 bp ATCCCCCTACAGCTCCTATCAGCCAACCTGGTGGCCTTAACGTTCATCACTGTGCACTCGAGCGACATCTaGGGGGAGTCCTTACTGGGC +
Preference number: 5 (lower is better)
Translates to: IPLQLLSANLVALTFITVHSSDI*GESLLG
Trigger: GCCCAGTAAGGACTCCCCCAAGATGTCGCTCGAGTG...CACAGTGATGAACGTTAAGGCCACCAGGTTGGCTGATAGGAGCTGTAGGGGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS CCA 90 bp GTTGGCCGTGCCCACTGCTCCACTTTCCGGCAAAAGTCACTGCAGTaGGGTGGAAGAGGCTGGTTTTTGTCACATTATCAAGTGCCGTCG +
Preference number: 5 (lower is better)
Translates to: VGRAHCSTFRQKSLQ*GGRGWFLSHYQVPS
Trigger: CGACGGCACTTGATAATGTGACAAAAACCAGCCTCTTCCACCCCACTGCAGTGACTTTTGCCGGAAAGTGGAGCAGTGGGCACGGCCAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS CCA 90 bp AGCAAAGATGAAATCAAGAGCCTGCCGTTCGGCCGCTGCGACGTTTaGATGCCACAAATCCACCATGAAAACCACCCGTGGGCCATCCTC +
Preference number: 5 (lower is better)
Translates to: SKDEIKSLPFGRCDV*MPQIHHENHPWAIL
Trigger: GAGGATGGCCCACGGGTGGTTTTCATGGTGGATTTGTGGCATCCAAACGTCGCAGCGGCCGAACGGCAGGCTCTTGATTTCATCTTTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR CAA 90 bp AAACACTGGACCTGCACCTGCGACCAGCTGTATATTCCAAACCACTCCTCGGCTTGGTACAGCTTCTGGTaGAGGCCCTCGTTGTGGGTG +
Preference number: 5 (lower is better)
Translates to: KHWTCTCDQLYIPNHSSAWYSFW*RPSLWV
Trigger: CACCCACAACGAGGGCCTCAACCAGAAGCTGTACCA...AGCCGAGGAGTGGTTTGGAATATACAGCTGGTCGCAGGTGCAGGTCCAGTGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS GCA 90 bp GGGAAATACTCTCATCGTCCCGGAGCAAAGATGAAATCAAGAGCCTaGCGTTCGGCCGCTGCGACGTTTGGATGCCACAAATCCACCATG +
Preference number: 5 (lower is better)
Translates to: GKYSHRPGAKMKSRA*RSAAATFGCHKSTM
Trigger: CATGGTGGATTTGTGGCATCCAAACGTCGCAGCGGCCGAACGGCAGGCTCTTGATTTCATCTTTGCTCCGGGACGATGAGAGTATTTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR CAA 90 bp ATCCCCCTACAGCTCCTATCAGCCAACCTGGTGGCCTTAACGTTCATCACTGTGGCGTACTCCTGCAGGTaGTGGTACAGCTTCTGGTTG +
Preference number: 5 (lower is better)
Translates to: IPLQLLSANLVALTFITVAYSCR*WYSFWL
Trigger: CAACCAGAAGCTGTACCACAACCTGCAGGAGTACGC...CACAGTGATGAACGTTAAGGCCACCAGGTTGGCTGATAGGAGCTGTAGGGGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS TCA 90 bp GAAGAGGCTGGTTTTTGTCACATTATCAAGTGCCGTCGGTCCCTGTaGAAGGATTTGTTTAGGAAAACCAAACCTGCGCCCGGGCGCGCG +
Preference number: 5 (lower is better)
Translates to: EEAGFCHIIKCRRSL*KDLFRKTKPAPGRA
Trigger: CGCGCGCCCGGGCGCAGGTTTGGTTTTCCTAAACAAATCCTTTCACAGGGACCGACGGCACTTGATAATGTGACAAAAACCAGCCTCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS GCA 90 bp GTCCATAGTGCTCCGTTATCACAGTCCCAGGGCTCAGCACAGAGATaGACGCGTTCCCAAAAACATTGTTCCCAATACAGGTCCGAAGGC +
Preference number: 5 (lower is better)
Translates to: VHSAPLSQSQGSAQR*TRSQKHCSQYRSEG
Trigger: GCCTTCGGACCTGTATTGGGAACAATGTTTTTGGGAACGCGTGCATCTCTGTGCTGAGCCCTGGGACTGTGATAACGGAGCACTATGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR CAA 90 bp ATCACACGTTCCGTGGCTGATCTGTGTGAGCCGCAGCTTGGTGCTGGGGGACACGTTTTCTTCCAACAGTaGTACCTCTTAGAAGCTGCT +
Preference number: 5 (lower is better)
Translates to: ITRSVADLCEPQLGAGGHVFFQQ*YLLEAA
Trigger: AGCAGCTTCTAAGAGGTACAACTGTTGGAAGAAAAC...GTGTCCCCCAGCACCAAGCTGCGGCTCACACAGATCAGCCACGGAACGTGTGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS TCA 90 bp GCTGGGGGTGCTGTTCATTTTCCATCCTTGCGGGAGGCTGCAGTTTaGGAAAGCTTTGTAGAGGGTCTCAAACTCACACAGGATGGTCTG +
Preference number: 5 (lower is better)
Translates to: AGGAVHFPSLREAAV*ESFVEGLKLTQDGL
Trigger: CAGACCATCCTGTGTGAGTTTGAGACCCTCTACAAAGCTTTCTCAAACTGCAGCCTCCCGCAAGGATGGAAAATGAACAGCACCCCCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS CCA 90 bp CATTTGGAGTTTTCAGACCTAAATGGCATCGGATGCGGATGTTGGTaGGTCCATAGTGCTCCGTTATCACAGTCCCAGGGCTCAGCACAG +
Preference number: 5 (lower is better)
Translates to: HLEFSDLNGIGCGCW*VHSAPLSQSQGSAQ
Trigger: CTGTGCTGAGCCCTGGGACTGTGATAACGGAGCACTATGGACCCACCAACATCCGCATCCGATGCCATTTAGGTCTGAAAACTCCAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS CCA 90 bp AGCCATTTGGAGTTTTCAGACCTAAATGGCATCGGATGCGGATGTTaGTGGGTCCATAGTGCTCCGTTATCACAGTCCCAGGGCTCAGCA +
Preference number: 5 (lower is better)
Translates to: SHLEFSDLNGIGCGC*WVHSAPLSQSQGSA
Trigger: TGCTGAGCCCTGGGACTGTGATAACGGAGCACTATGGACCCACCAACATCCGCATCCGATGCCATTTAGGTCTGAAAACTCCAAATGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR CAA 90 bp GTACCTGCGCGGGCTGTTGGTTTTGTAAACGCAGAGCAGAGCAGTCACGATGTGGGAAGAGGCTGGTTTTaGTCACATTATCAAGTGCCG +
Preference number: 5 (lower is better)
Translates to: VPARAVGFVNAEQSSHDVGRGWF*SHYQVP
Trigger: CGGCACTTGATAATGTGACAAAAACCAGCCTCTTCC...CACATCGTGACTGCTCTGCTCTGCGTTTACAAAACCAACAGCCCGCGCAGGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR CAA 90 bp ATTTTACTCAAATGTAGACGTGCTCTTTGCACACTTGCTAGTACCTGCCTGGTGCTGCCAGGGGCGGCATaGATGAACGACAAGGTTGGC +
Preference number: 5 (lower is better)
Translates to: ILLKCRRALCTLASTCLVLPGAA*MNDKVG
Trigger: GCCAACCTTGTCGTTCATCAATGCCGCCCCTGGCAG...CACCAGGCAGGTACTAGCAAGTGTGCAAAGAGCACGTCTACATTTGAGTAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR CAA 90 bp AGACGTGCTCTTTGCACACTTGCTAGTACCTGCCTGGTGCATTTCAACTGTGTTGTGCTCTTTGCACACTaGCTAGTACCTGCCTGGTGC +
Preference number: 5 (lower is better)
Translates to: RRALCTLASTCLVHFNCVVLFAH*LVPAWC
Trigger: GCACCAGGCAGGTACTAGCAAGTGTGCAAAGAGCAC...AACACAGTTGAAATGCACCAGGCAGGTACTAGCAAGTGTGCAAAGAGCACGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR CAA 90 bp TTTCAACTGTGTTTTCTTCCAACAGTTGTACCTCTTAGAAGCTGCTGTTTTCCATGGTTGAGGCCCTCGTaGTGGGTGCAGCGCACGCAC +
Preference number: 5 (lower is better)
Translates to: FQLCFLPTVVPLRSCCFPWLRPS*WVQRTH
Trigger: GTGCGTGCGCTGCACCCACAACGAGGGCCTCAACCA...TGGAAAACAGCAGCTTCTAAGAGGTACAACTGTTGGAAGAAAACACAGTTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR CAA 90 bp GTCACGCAGTGCACACCTTTGTGCCATGACAAAGACACAGGGCCAACTCTTCCACCAGCTCACAGCCATTaGGAGTTTTCAGACCTAAAT +
Preference number: 5 (lower is better)
Translates to: VTQCTPLCHDKDTGPTLPPAHSH*EFSDLN
Trigger: ATTTAGGTCTGAAAACTCCAAATGGCTGTGAGCTGG...TGGAAGAGTTGGCCCTGTGTCTTTGTCATGGCACAAAGGTGTGCACTGCGTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR CAA 90 bp TCAAATGTAGACGTGCTCTTTGCACACTTGCTAGTACCTGCCTGGTGCATTTCACACTGGCTTGGGTCATaGTCACGCAGTGCACACCTT +
Preference number: 5 (lower is better)
Translates to: SNVDVLFAHLLVPAWCISHWLGS*SRSAHL
Trigger: AAGGTGTGCACTGCGTGACAATGACCCAAGCCAGTG...TGAAATGCACCAGGCAGGTACTAGCAAGTGTGCAAAGAGCACGTCTACATTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR CAA 90 bp ATCCCCCTACAGCTCCTATCAGCCAACCTGGTGGCCTTAACGTTCATCACTGTGGCTGCTGTTTTCCATTaGGATCTAAACACTGGACCT +
Preference number: 5 (lower is better)
Translates to: IPLQLLSANLVALTFITVAAVFH*DLNTGP
Trigger: AGGTCCAGTGTTTAGATCCAAATGGAAAACAGCAGC...CACAGTGATGAACGTTAAGGCCACCAGGTTGGCTGATAGGAGCTGTAGGGGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR CAA 90 bp CTTGCTAGTACCTGCCTGGTGCATTTCAACTGTGTTTTCTTCCAACAGTTGTACGCGGGAGGCTGCAGTTaGAGAAAGCTTTGTAGAGGG +
Preference number: 5 (lower is better)
Translates to: LASTCLVHFNCVFFQQLYAGGCS*RKLCRG
Trigger: CCCTCTACAAAGCTTTCTCAAACTGCAGCCTCCCGC...GTACAACTGTTGGAAGAAAACACAGTTGAAATGCACCAGGCAGGTACTAGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR CAA 90 bp CTTGCTAGTACCTGCCTGGTGCATTTCAACTGTGTTTTCTTCCAACAGTTGTACCTAGCACACACTGGCTaGGGTCATTGTCACGCAGTG +
Preference number: 5 (lower is better)
Translates to: LASTCLVHFNCVFFQQLYLAHTG*GHCHAV
Trigger: CACTGCGTGACAATGACCCAAGCCAGTGTGTGCTAG...GTACAACTGTTGGAAGAAAACACAGTTGAAATGCACCAGGCAGGTACTAGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR CAA 90 bp TTTCAACTGTGTTTTCTTCCAACAGTTGTACCTCTTAGAAGCTGCTGTTTTCCACGGCCGCTGCGACGTTaGGATGCCACAAATCCACCA +
Preference number: 5 (lower is better)
Translates to: FQLCFLPTVVPLRSCCFPRPLRR*DATNPP
Trigger: TGGTGGATTTGTGGCATCCAAACGTCGCAGCGGCCG...TGGAAAACAGCAGCTTCTAAGAGGTACAACTGTTGGAAGAAAACACAGTTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS CCA 90 bp TGCAGTTTGAGAAAGCTTTGTAGAGGGTCTCAAACTCACACAGGATaGTCTGGAAGTTCCGTTCCAGCACTTCCACATCATGTTTCTGTG +
Preference number: 5 (lower is better)
Translates to: CSLRKLCRGSQTHTG*SGSSVPALPHHVSV
Trigger: CACAGAAACATGATGTGGAAGTGCTGGAACGGAACTTCCAGACCATCCTGTGTGAGTTTGAGACCCTCTACAAAGCTTTCTCAAACTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR CAA 90 bp CTTGCTAGTACCTGCCTGGTGCATTTCAACTGTGTTTTCTTCCAACAGTTGTACACGCAGTGCACACCTTaGTGCCATGACAAAGACACA +
Preference number: 5 (lower is better)
Translates to: LASTCLVHFNCVFFQQLYTQCTP*CHDKDT
Trigger: TGTGTCTTTGTCATGGCACAAAGGTGTGCACTGCGT...GTACAACTGTTGGAAGAAAACACAGTTGAAATGCACCAGGCAGGTACTAGCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR CAA 90 bp CTTGCTAGTACCTGCCTGGTGCATTTCAACTGTGTTTTCTTCCAACAGTTGTACGCGTTCCCAAAAACATaGTTCCCAATACAGGTCCGA +
Preference number: 5 (lower is better)
Translates to: LASTCLVHFNCVFFQQLYAFPKT*FPIQVR
Trigger: TCGGACCTGTATTGGGAACAATGTTTTTGGGAACGC...GTACAACTGTTGGAAGAAAACACAGTTGAAATGCACCAGGCAGGTACTAGCAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR CAA 90 bp ATTTTACTCAAATGTAGACGTGCTCTTTGCACACTTGCTAGTACCTGCCTGGTGTCTATTATTCCAGTTTaGCCAGAGAAAGGCTTTCCC +
Preference number: 5 (lower is better)
Translates to: ILLKCRRALCTLASTCLVSIIPV*PEKGFP
Trigger: GGGAAAGCCTTTCTCTGGCAAAACTGGAATAATAGA...CACCAGGCAGGTACTAGCAAGTGTGCAAAGAGCACGTCTACATTTGAGTAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS-3UTR CAA 90 bp TTTCAACTGTGTTTTCTTCCAACAGTTGTACCTCTTAGAAGCTGCTGTTTTCCAAGACTTCAGGTATGTTaGAAATGTCTGCCTTTTCCT +
Preference number: 5 (lower is better)
Translates to: FQLCFLPTVVPLRSCCFPRLQVC*KCLPFP
Trigger: AGGAAAAGGCAGACATTTCAAACATACCTGAAGTCT...TGGAAAACAGCAGCTTCTAAGAGGTACAACTGTTGGAAGAAAACACAGTTGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS GCA 72 bp TGTCGCAGTCCCGCACGGACTGGATGCCGGTGGCGATaGAGTCCCTCAGGCCATCCAGCGACCAGCTCCAGG +
Preference number: 6 (lower is better)
Translates to: CRSPARTGCRWR*SPSGHPATSSR
Trigger: CCTGGAGCTGGTCGCTGGATGGCCTGAGGGACTGCATCGCCACCGGCATCCAGTCCGTGCGGGACTGCGACA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS GCA 72 bp GGCCCTGCTCGCGGATGCCCTTGTGGATGCGGCCCATaGCGGACCAGGAGTAGCGCTTGGCGTACTCCTGCA +
Preference number: 6 (lower is better)
Translates to: GPARGCPCGCGP*RTRSSAWRTPA
Trigger: TGCAGGAGTACGCCAAGCGCTACTCCTGGTCCGGCATGGGCCGCATCCACAAGGGCATCCGCGAGCAGGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS CCA 72 bp GTGGGCAGGTCGGGCAGGAAGAAGACCTCGGGCTTCTaGATGGAGGGCCGGCTGTTGAGGTACCGGCCCTGC +
Preference number: 6 (lower is better)
Translates to: VGRSGRKKTSGF*MEGRLLRYRPC
Trigger: GCAGGGCCGGTACCTCAACAGCCGGCCCTCCATCCAGAAGCCCGAGGTCTTCTTCCTGCCCGACCTGCCCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS CCA 72 bp GTGATGACAGCGGTGGTGTCGCAGTCCCGCACGGACTaGATGCCGGTGGCGATGCAGTCCCTCAGGCCATCC +
Preference number: 6 (lower is better)
Translates to: VMTAVVSQSRTD*MPVAMQSLRPS
Trigger: GGATGGCCTGAGGGACTGCATCGCCACCGGCATCCAGTCCGTGCGGGACTGCGACACCACCGCTGTCATCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS CAA 90 bp GGAGGCATGGCTGCCACCGATCCTCAGATACTGCCAGGGGCGGCATaGATGAACGACAAGGTTGGCCGTGCCCACTGCTCCACTTTCCGG +
Preference number: 6 (lower is better)
Translates to: GGMAATDPQILPGAA*MNDKVGRAHCSTFR
Trigger: CCGGAAAGTGGAGCAGTGGGCACGGCCAACCTTGTCGTTCATCAATGCCGCCCCTGGCAGTATCTGAGGATCGGTGGCAGCCATGCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS CAA 72 bp GCTGCCACCGATCCTCAGATACTGCCAGGGGCGGCATaGATGAACGACAAGGTTGGCCGTGCCCACTGCTCC +
Preference number: 6 (lower is better)
Translates to: AATDPQILPGAA*MNDKVGRAHCS
Trigger: GGAGCAGTGGGCACGGCCAACCTTGTCGTTCATCAATGCCGCCCCTGGCAGTATCTGAGGATCGGTGGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS CAA 72 bp TGCAGGTTGTGGTACAGCTTCTGGTTGAGGCCCTCGTaGTGGGTGCAGCGCACGCACTCAGGGGACTGGCAG +
Preference number: 6 (lower is better)
Translates to: CRLWYSFWLRPS*WVQRTHSGDWQ
Trigger: CTGCCAGTCCCCTGAGTGCGTGCGCTGCACCCACAACGAGGGCCTCAACCAGAAGCTGTACCACAACCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS TCA 72 bp TGGCGTACTCCTGCAGGTTGTGGTACAGCTTCTGGTTaGGGCCCTCGTTGTGGGTGCAGCGCACGCACTCAG +
Preference number: 6 (lower is better)
Translates to: WRTPAGCGTASG*GPRCGCSARTQ
Trigger: CTGAGTGCGTGCGCTGCACCCACAACGAGGGCCTCAACCAGAAGCTGTACCACAACCTGCAGGAGTACGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS CCA 72 bp ACCAGCTCCAGGCCACCAGCCACTCGAGCGACATCTTaGGGGAGTCCTTACTGGGCGTGTGAAGCAAGGTCA +
Preference number: 6 (lower is better)
Translates to: TSSRPPATRATS*GSPYWACEARS
Trigger: TGACCTTGCTTCACACGCCCAGTAAGGACTCCCCCAAGATGTCGCTCGAGTGGCTGGTGGCCTGGAGCTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS CCA 72 bp AGGTTGTGGTACAGCTTCTGGTTGAGGCCCTCGTTGTaGGTGCAGCGCACGCACTCAGGGGACTGGCAGTAC +
Preference number: 6 (lower is better)
Translates to: RLWYSFWLRPSL*VQRTHSGDWQY
Trigger: GTACTGCCAGTCCCCTGAGTGCGTGCGCTGCACCCACAACGAGGGCCTCAACCAGAAGCTGTACCACAACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS CCA 72 bp TGTGGATGCGGCCCATGCCGGACCAGGAGTAGCGCTTaGCGTACTCCTGCAGGTTGTGGTACAGCTTCTGGT +
Preference number: 6 (lower is better)
Translates to: CGCGPCRTRSSA*RTPAGCGTASG
Trigger: ACCAGAAGCTGTACCACAACCTGCAGGAGTACGCCAAGCGCTACTCCTGGTCCGGCATGGGCCGCATCCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS CCA 72 bp CATCATGTTTCTGTGCGTCCCGGGAGAAATAGGGCGTaGTGGGCAGGTCGGGCAGGAAGAAGACCTCGGGCT +
Preference number: 6 (lower is better)
Translates to: HHVSVRPGRNRA*WAGRAGRRPRA
Trigger: AGCCCGAGGTCTTCTTCCTGCCCGACCTGCCCACCACGCCCTATTTCTCCCGGGACGCACAGAAACATGATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS TCA 72 bp TCGAGCGACATCTTGGGGGAGTCCTTACTGGGCGTGTaGAGCAAGGTCAGACAATCAGTCCTCGGGGGTCCC +
Preference number: 6 (lower is better)
Translates to: SSDILGESLLGV*SKVRQSVLGGP
Trigger: GGGACCCCCGAGGACTGATTGTCTGACCTTGCTTCACACGCCCAGTAAGGACTCCCCCAAGATGTCGCTCGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS GCA 72 bp GCCAGGGGCGGCATTGATGAACGACAAGGTTGGCCGTaGCCACTGCTCCACTTTCCGGCAAAAGTCACTGCA +
Preference number: 6 (lower is better)
Translates to: ARGGIDERQGWP*PLLHFPAKVTA
Trigger: TGCAGTGACTTTTGCCGGAAAGTGGAGCAGTGGGCACGGCCAACCTTGTCGTTCATCAATGCCGCCCCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS CCA 72 bp ACAGGTCCGAAGGCTTCCGAGCAAGCGGTACGTCCGTaGGCACTTCCTACAGTTCCTGGGAACACAAACCCC +
Preference number: 6 (lower is better)
Translates to: TGPKASEQAVRP*ALPTVPGNTNP
Trigger: GGGGTTTGTGTTCCCAGGAACTGTAGGAAGTGCCCACGGACGTACCGCTTGCTCGGAAGCCTTCGGACCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS CAA 72 bp TTGGCGTACTCCTGCAGGTTGTGGTACAGCTTCTGGTaGAGGCCCTCGTTGTGGGTGCAGCGCACGCACTCA +
Preference number: 6 (lower is better)
Translates to: LAYSCRLWYSFW*RPSLWVQRTHS
Trigger: TGAGTGCGTGCGCTGCACCCACAACGAGGGCCTCAACCAGAAGCTGTACCACAACCTGCAGGAGTACGCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS TCA 72 bp CGGCCGCTGCGACGTTTGGATGCCACAAATCCACCATaGAAACCACCCGTGGGCCATCCTCTGCTGAACCTT +
Preference number: 6 (lower is better)
Translates to: RPLRRLDATNPP*KPPVGHPLLNL
Trigger: AAGGTTCAGCAGAGGATGGCCCACGGGTGGTTTTCATGGTGGATTTGTGGCATCCAAACGTCGCAGCGGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS GCA 72 bp GCGGCATTGATGAACGACAAGGTTGGCCGTGCCCACTaGTCCACTTTCCGGCAAAAGTCACTGCAGTGGGGT +
Preference number: 6 (lower is better)
Translates to: AALMNDKVGRAH*STFRQKSLQWG
Trigger: ACCCCACTGCAGTGACTTTTGCCGGAAAGTGGAGCAGTGGGCACGGCCAACCTTGTCGTTCATCAATGCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS CCA 72 bp GATACTGCCAGGGGCGGCATTGATGAACGACAAGGTTaGCCGTGCCCACTGCTCCACTTTCCGGCAAAAGTC +
Preference number: 6 (lower is better)
Translates to: DTARGGIDERQG*PCPLLHFPAKV
Trigger: GACTTTTGCCGGAAAGTGGAGCAGTGGGCACGGCCAACCTTGTCGTTCATCAATGCCGCCCCTGGCAGTATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS CCA 72 bp CCAGCCACTCGAGCGACATCTTGGGGGAGTCCTTACTaGGCGTGTGAAGCAAGGTCAGACAATCAGTCCTCG +
Preference number: 6 (lower is better)
Translates to: PATRATSWGSPY*ACEARSDNQSS
Trigger: CGAGGACTGATTGTCTGACCTTGCTTCACACGCCCAGTAAGGACTCCCCCAAGATGTCGCTCGAGTGGCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS GCA 72 bp GAAGTTCCGTTCCAGCACTTCCACATCATGTTTCTGTaGGTCCCGGGAGAAATAGGGCGTGGTGGGCAGGTC +
Preference number: 6 (lower is better)
Translates to: EVPFQHFHIMFL*VPGEIGRGGQV
Trigger: GACCTGCCCACCACGCCCTATTTCTCCCGGGACGCACAGAAACATGATGTGGAAGTGCTGGAACGGAACTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS CCA 72 bp GAAATCAAGAGCCTGCCGTTCGGCCGCTGCGACGTTTaGATGCCACAAATCCACCATGAAAACCACCCGTGG +
Preference number: 6 (lower is better)
Translates to: EIKSLPFGRCDV*MPQIHHENHPW
Trigger: CCACGGGTGGTTTTCATGGTGGATTTGTGGCATCCAAACGTCGCAGCGGCCGAACGGCAGGCTCTTGATTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS CAA 90 bp ACAGTCCCAGGGCTCAGCACAGAGATGCACGCGTTCCCAAAAACATaGTTCCCAATACAGGTCCGAAGGCTTCCGAGCAAGCGGTACGTC +
Preference number: 6 (lower is better)
Translates to: TVPGLSTEMHAFPKT*FPIQVRRLPSKRYV
Trigger: GACGTACCGCTTGCTCGGAAGCCTTCGGACCTGTATTGGGAACAATGTTTTTGGGAACGCGTGCATCTCTGTGCTGAGCCCTGGGACTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS TCA 72 bp AGCATGGGAAATACTCTCATCGTCCCGGAGCAAAGATaGAATCAAGAGCCTGCCGTTCGGCCGCTGCGACGT +
Preference number: 6 (lower is better)
Translates to: SMGNTLIVPEQR*NQEPAVRPLRR
Trigger: ACGTCGCAGCGGCCGAACGGCAGGCTCTTGATTTCATCTTTGCTCCGGGACGATGAGAGTATTTCCCATGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS GCA 72 bp TCTCATCGTCCCGGAGCAAAGATGAAATCAAGAGCCTaGCGTTCGGCCGCTGCGACGTTTGGATGCCACAAA +
Preference number: 6 (lower is better)
Translates to: SHRPGAKMKSRA*RSAAATFGCHK
Trigger: TTTGTGGCATCCAAACGTCGCAGCGGCCGAACGGCAGGCTCTTGATTTCATCTTTGCTCCGGGACGATGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS CAA 72 bp GGGCTCAGCACAGAGATGCACGCGTTCCCAAAAACATaGTTCCCAATACAGGTCCGAAGGCTTCCGAGCAAG +
Preference number: 6 (lower is better)
Translates to: GLSTEMHAFPKT*FPIQVRRLPSK
Trigger: CTTGCTCGGAAGCCTTCGGACCTGTATTGGGAACAATGTTTTTGGGAACGCGTGCATCTCTGTGCTGAGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS CCA 72 bp TTTTCAGACCTAAATGGCATCGGATGCGGATGTTGGTaGGTCCATAGTGCTCCGTTATCACAGTCCCAGGGC +
Preference number: 6 (lower is better)
Translates to: FSDLNGIGCGCW*VHSAPLSQSQG
Trigger: GCCCTGGGACTGTGATAACGGAGCACTATGGACCCACCAACATCCGCATCCGATGCCATTTAGGTCTGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS CAA 90 bp CGCTGGGGGTGCTGTTCATTTTCCATCCTTGCGGGAGGCTGCAGTTaGAGAAAGCTTTGTAGAGGGTCTCAAACTCACACAGGATGGTCT +
Preference number: 6 (lower is better)
Translates to: RWGCCSFSILAGGCS*RKLCRGSQTHTGWS
Trigger: AGACCATCCTGTGTGAGTTTGAGACCCTCTACAAAGCTTTCTCAAACTGCAGCCTCCCGCAAGGATGGAAAATGAACAGCACCCCCAGCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS GCA 72 bp AGCAAAGATGAAATCAAGAGCCTGCCGTTCGGCCGCTaGGACGTTTGGATGCCACAAATCCACCATGAAAAC +
Preference number: 6 (lower is better)
Translates to: SKDEIKSLPFGR*DVWMPQIHHEN
Trigger: GTTTTCATGGTGGATTTGTGGCATCCAAACGTCGCAGCGGCCGAACGGCAGGCTCTTGATTTCATCTTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS CCA 72 bp GCCCACTGCTCCACTTTCCGGCAAAAGTCACTGCAGTaGGGTGGAAGAGGCTGGTTTTTGTCACATTATCAA +
Preference number: 6 (lower is better)
Translates to: AHCSTFRQKSLQ*GGRGWFLSHYQ
Trigger: TTGATAATGTGACAAAAACCAGCCTCTTCCACCCCACTGCAGTGACTTTTGCCGGAAAGTGGAGCAGTGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS CCA 72 bp GAGTTTTCAGACCTAAATGGCATCGGATGCGGATGTTaGTGGGTCCATAGTGCTCCGTTATCACAGTCCCAG +
Preference number: 6 (lower is better)
Translates to: EFSDLNGIGCGC*WVHSAPLSQSQ
Trigger: CTGGGACTGTGATAACGGAGCACTATGGACCCACCAACATCCGCATCCGATGCCATTTAGGTCTGAAAACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS GCA 72 bp TGGGGGTGCTGTTCATTTTCCATCCTTGCGGGAGGCTaGAGTTTGAGAAAGCTTTGTAGAGGGTCTCAAACT +
Preference number: 6 (lower is better)
Translates to: WGCCSFSILAGG*SLRKLCRGSQT
Trigger: AGTTTGAGACCCTCTACAAAGCTTTCTCAAACTGCAGCCTCCCGCAAGGATGGAAAATGAACAGCACCCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS GCA 72 bp AGCCATTTGGAGTTTTCAGACCTAAATGGCATCGGATaGGGATGTTGGTGGGTCCATAGTGCTCCGTTATCA +
Preference number: 6 (lower is better)
Translates to: SHLEFSDLNGIG*GCWWVHSAPLS
Trigger: TGATAACGGAGCACTATGGACCCACCAACATCCGCATCCGATGCCATTTAGGTCTGAAAACTCCAAATGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS TCA 72 bp GGTTTTTGTCACATTATCAAGTGCCGTCGGTCCCTGTaGAAGGATTTGTTTAGGAAAACCAAACCTGCGCCC +
Preference number: 6 (lower is better)
Translates to: GFCHIIKCRRSL*KDLFRKTKPAP
Trigger: GGGCGCAGGTTTGGTTTTCCTAAACAAATCCTTTCACAGGGACCGACGGCACTTGATAATGTGACAAAAACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS CCA 72 bp AGAAAGCTTTGTAGAGGGTCTCAAACTCACACAGGATaGTCTGGAAGTTCCGTTCCAGCACTTCCACATCAT +
Preference number: 6 (lower is better)
Translates to: RKLCRGSQTHTG*SGSSVPALPHH
Trigger: ATGATGTGGAAGTGCTGGAACGGAACTTCCAGACCATCCTGTGTGAGTTTGAGACCCTCTACAAAGCTTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215906.6
CDS CAA 72 bp TGCTGTTCATTTTCCATCCTTGCGGGAGGCTGCAGTTaGAGAAAGCTTTGTAGAGGGTCTCAAACTCACACA +
Preference number: 6 (lower is better)
Translates to: CCSFSILAGGCS*RKLCRGSQTHT
Trigger: TGTGTGAGTTTGAGACCCTCTACAAAGCTTTCTCAAACTGCAGCCTCCCGCAAGGATGGAAAATGAACAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215906.6