RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ASPDH (Homo sapiens)

Ensembl gene IDs: ENSG00000204653

Ensembl transcript IDs: ENST00000376916.7, ENST00000389208.9, ENST00000593569.1, ENST00000597030.1, ENST00000597232.1, ENST00000598657.1, ENST00000601207.5, ENST00000601287.1

Found 48 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS TCA 90 bp AGCCCACCACGCCCACCCTCCACGGGCCCCTGTCGGCCATGGCCCTaGGTGCGGTGTCTGGGGCCTGGCTCCCTGGGCTGCTCGCTGCCC +
Preference number: 5 (lower is better)
Translates to: SPPRPPSTGPCRPWP*VRCLGPGSLGCSLP
Trigger: GGGCAGCGAGCAGCCCAGGGAGCCAGGCCCCAGACACCGCACTCAGGGCCATGGCCGACAGGGGCCCGTGGAGGGTGGGCGTGGTGGGCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389208.9
CDS GCA 90 bp GCGCCCCACAGGGCCCCTCGGGCCACAAACACGGCGTGGTCCCAGTaGTGTGAGGCCTCCAAGAGCTGCCGCTCTGTGGTCTGGTCACTT +
Preference number: 5 (lower is better)
Translates to: APHRAPRATNTAWSQ*CEASKSCRSVVWSL
Trigger: AAGTGACCAGACCACAGAGCGGCAGCTCTTGGAGGCCTCACAGCACTGGGACCACGCCGTGTTTGTGGCCCGAGGGGCCCTGTGGGGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389208.9
ENST00000593569.1
CDS CCA 90 bp ATGTCCTCAGCGCCCCACAGGGCCCCTCGGGCCACAAACACGGCGTaGTCCCAGTGCTGTGAGGCCTCCAAGAGCTGCCGCTCTGTGGTC +
Preference number: 5 (lower is better)
Translates to: MSSAPHRAPRATNTA*SQCCEASKSCRSVV
Trigger: GACCACAGAGCGGCAGCTCTTGGAGGCCTCACAGCACTGGGACCACGCCGTGTTTGTGGCCCGAGGGGCCCTGTGGGGCGCTGAGGACAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389208.9
ENST00000593569.1
CDS TCA 90 bp CGCCTTTCACTCTGTCCCCCATCGTGCCACCAGCTGCCTCCAGTGTaGCGTTCTCGCTCCCACGTCCGTCCCTCCCGTTCCCCAGCTCGC +
Preference number: 5 (lower is better)
Translates to: RLSLCPPSCHQLPPV*RSRSHVRPSRSPAR
Trigger: GCGAGCTGGGGAACGGGAGGGACGGACGTGGGAGCGAGAACGTCACACTGGAGGCAGCTGGTGGCACGATGGGGGACAGAGTGAAAGGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601207.5
CDS GCA 90 bp CTCGCGTCAGCCCAGGAGAAGCCTTCGAGGCCTGGAGAGGCCAAGTaGCCCCAACATGAGCCCCAGCCTCTGTGCCTTGAGGGTGCCTGG +
Preference number: 5 (lower is better)
Translates to: LASAQEKPSRPGEAK*PQHEPQPLCLEGAW
Trigger: CCAGGCACCCTCAAGGCACAGAGGCTGGGGCTCATGTTGGGGGCACTTGGCCTCTCCAGGCCTCGAAGGCTTCTCCTGGGCTGACGCGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376916.7
ENST00000593569.1
ENST00000597030.1
ENST00000598657.1
CDS CCA 90 bp CGGCAGGGTTCTCTCTGCGGGTGTGCACAGCAAAGCTTCGGCCCGTaGGGCCCCGGGGTCCGCTCAGCTCTACATCCACCACGTGCATGT +
Preference number: 5 (lower is better)
Translates to: RQGSLCGCAQQSFGP*GPGVRSALHPPRAC
Trigger: ACATGCACGTGGTGGATGTAGAGCTGAGCGGACCCCGGGGCCCCACGGGCCGAAGCTTTGCTGTGCACACCCGCAGAGAGAACCCTGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000376916.7
ENST00000389208.9
ENST00000597030.1
ENST00000597232.1
ENST00000601207.5
ENST00000601287.1
CDS TCA 90 bp AGGCTTTCACTCTGTCCCCCATCGTGCCACCAGCTGCCTCCAGTGTaGCGTTCTCGCTCCCACGTCCGTCCCTCCCGTTCCCCAGCTCGC +
Preference number: 5 (lower is better)
Translates to: RLSLCPPSCHQLPPV*RSRSHVRPSRSPAR
Trigger: GCGAGCTGGGGAACGGGAGGGACGGACGTGGGAGCGAGAACGTCACACTGGAGGCAGCTGGTGGCACGATGGGGGACAGAGTGAAAGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601287.1
CDS TCA 90 bp TACCTTTCACTCTGTCCCCCATCGTGCCACCAGCTGCCTCCAGTGTaGCGTTCTCGCTCCCACGTCCGTCCCTCCCGTTCCCCAGCTCGC +
Preference number: 5 (lower is better)
Translates to: YLSLCPPSCHQLPPV*RSRSHVRPSRSPAR
Trigger: GCGAGCTGGGGAACGGGAGGGACGGACGTGGGAGCGAGAACGTCACACTGGAGGCAGCTGGTGGCACGATGGGGGACAGAGTGAAAGGTA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376916.7
ENST00000593569.1
ENST00000597030.1
ENST00000598657.1
CDS GCA 90 bp GCCACAAACACGGCGTGGTCCCAGTGCTGTGAGGCCTCCAAGAGCTaGCGCTCTGTGGTCTGGTCACTTAGAGCTGAGGGGGACCCCACC +
Preference number: 5 (lower is better)
Translates to: ATNTAWSQCCEASKS*RSVVWSLRAEGDPT
Trigger: GGTGGGGTCCCCCTCAGCTCTAAGTGACCAGACCACAGAGCGGCAGCTCTTGGAGGCCTCACAGCACTGGGACCACGCCGTGTTTGTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389208.9
ENST00000593569.1
CDS GCA 90 bp CCAGATCAGGGCGCCTTTCACTCTGTCCCCCATCGTGCCACCAGCTaGCTCCAGTGTGACGTTCTCGCTCCCACGTCCGTCCCTCCCGTT +
Preference number: 5 (lower is better)
Translates to: PDQGAFHSVPHRATS*LQCDVLAPTSVPPV
Trigger: AACGGGAGGGACGGACGTGGGAGCGAGAACGTCACACTGGAGGCAGCTGGTGGCACGATGGGGGACAGAGTGAAAGGCGCCCTGATCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601207.5
CDS CCA 90 bp TCCACAACCAGATCAGGGCGCCTTTCCCCAAGGGCAGCAAGGTTCTaGAGCTGCAGGGAAGGGGGCACGCTCCCTGCCATTCGTCCTGGG +
Preference number: 5 (lower is better)
Translates to: STTRSGRLSPRAARF*SCREGGTLPAIRPG
Trigger: CCCAGGACGAATGGCAGGGAGCGTGCCCCCTTCCCTGCAGCTCCAGAACCTTGCTGCCCTTGGGGAAAGGCGCCCTGATCTGGTTGTGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389208.9
CDS CCA 90 bp CGGCGTGGTCCCAGTGCTGTGAGGCCTCCAAGAGCTGCCGCTCTGTaGTCTGGTCACTTAGAGCTGAGGGGGACCCCACCAGGAGATTGG +
Preference number: 5 (lower is better)
Translates to: RRGPSAVRPPRAAAL*SGHLELRGTPPGDW
Trigger: CCAATCTCCTGGTGGGGTCCCCCTCAGCTCTAAGTGACCAGACCACAGAGCGGCAGCTCTTGGAGGCCTCACAGCACTGGGACCACGCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389208.9
ENST00000593569.1
CDS CCA 90 bp TGGTCCCAGTGCTGTGAGGCCTCCAAGAGCTGCCGCTCTGTGGTCTaGTCACTTAGAGCTGAGGGGGACCCCACCAGGAGATTGGCATGG +
Preference number: 5 (lower is better)
Translates to: WSQCCEASKSCRSVV*SLRAEGDPTRRLAW
Trigger: CCATGCCAATCTCCTGGTGGGGTCCCCCTCAGCTCTAAGTGACCAGACCACAGAGCGGCAGCTCTTGGAGGCCTCACAGCACTGGGACCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389208.9
ENST00000593569.1
CDS CCA 90 bp GGAGAGCCTGGACTCAGCCCAACACCCTGCTTAGCTCTGCTCACCTaGTATCAGCCACGAGCACCCCAATCACCCCATCGAAGCCCAGGC +
Preference number: 5 (lower is better)
Translates to: GEPGLSPTPCLALLT*YQPRAPQSPHRSPG
Trigger: GCCTGGGCTTCGATGGGGTGATTGGGGTGCTCGTGGCTGATACCAGGTGAGCAGAGCTAAGCAGGGTGTTGGGCTGAGTCCAGGCTCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597232.1
CDS CCA 90 bp ACCACGTGCATGTCCGTGAGGCTGGGACAAGAGGGGCAGTCAGTCTaGAGAGCCTGGACTCAGCCCAACACCCTGCTTAGCTCTGCTCAC +
Preference number: 5 (lower is better)
Translates to: TTCMSVRLGQEGQSV*RAWTQPNTLLSSAH
Trigger: GTGAGCAGAGCTAAGCAGGGTGTTGGGCTGAGTCCAGGCTCTCCAGACTGACTGCCCCTCTTGTCCCAGCCTCACGGACATGCACGTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597232.1
CDS CCA 90 bp GCATGGCGCAGGATTTGTGCCCCAGATTCATGGATTATTTTGGGATaGGCCACTTCCACAACCAGATCAGGGCGCCTTTCACTCTGTCCC +
Preference number: 5 (lower is better)
Translates to: AWRRICAPDSWIILG*ATSTTRSGRLSLCP
Trigger: GGGACAGAGTGAAAGGCGCCCTGATCTGGTTGTGGAAGTGGCCCATCCCAAAATAATCCATGAATCTGGGGCACAAATCCTGCGCCATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601207.5
CDS CCA 90 bp GCATGGCGCAGGATTTGTGCCCCAGATTCATGGATTATTTTGGGATaGGCCACTTCCACAACCAGATCAGGGCGCCTTGACTTGCTACCT +
Preference number: 5 (lower is better)
Translates to: AWRRICAPDSWIILG*ATSTTRSGRLDLLP
Trigger: AGGTAGCAAGTCAAGGCGCCCTGATCTGGTTGTGGAAGTGGCCCATCCCAAAATAATCCATGAATCTGGGGCACAAATCCTGCGCCATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376916.7
ENST00000593569.1
ENST00000598657.1
CDS CCA 90 bp GATTGGCATGGCGCAGGATTTGTGCCCCAGATTCATGGATTATTTTaGGATGGGCCACTTCCACAACCAGATCAGGGCGCCTTGACTTGC +
Preference number: 5 (lower is better)
Translates to: DWHGAGFVPQIHGLF*DGPLPQPDQGALTC
Trigger: GCAAGTCAAGGCGCCCTGATCTGGTTGTGGAAGTGGCCCATCCCAAAATAATCCATGAATCTGGGGCACAAATCCTGCGCCATGCCAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376916.7
ENST00000593569.1
ENST00000598657.1
CDS GCA 90 bp CATGGTGACACGAAGGCTCAGGAGATTGGCATGGCGCAGGATTTGTaGCCCAGATTCATGGATTATTTTGGGATGGGCCACTTCCACAAC +
Preference number: 5 (lower is better)
Translates to: HGDTKAQEIGMAQDL*PRFMDYFGMGHFHN
Trigger: GTTGTGGAAGTGGCCCATCCCAAAATAATCCATGAATCTGGGGCACAAATCCTGCGCCATGCCAATCTCCTGAGCCTTCGTGTCACCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376916.7
ENST00000601207.5
CDS CCA 90 bp GATTGGCATGGCGCAGGATTTGTGCCCCAGATTCATGGATTATTTTaGGATGGGCCACTTCCACAACCAGATCAGGGCGCCTTTCACTCT +
Preference number: 5 (lower is better)
Translates to: DWHGAGFVPQIHGLF*DGPLPQPDQGAFHS
Trigger: AGAGTGAAAGGCGCCCTGATCTGGTTGTGGAAGTGGCCCATCCCAAAATAATCCATGAATCTGGGGCACAAATCCTGCGCCATGCCAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601207.5
CDS CCA 90 bp GGGTGGACAGAGACAGAGAGAGTCTCGATCAGAGGCGGGCACAAATaGAGACATCTACAGTGCCAGGATTCAAAGTCATGGAGAGAGGTT +
Preference number: 5 (lower is better)
Translates to: GWTETERVSIRGGHK*RHLQCQDSKSWREV
Trigger: AACCTCTCTCCATGACTTTGAATCCTGGCACTGTAGATGTCTCCATTTGTGCCCGCCTCTGATCGAGACTCTCTCTGTCTCTGTCCACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601287.1
CDS GCA 90 bp GAGAGAGTCTCGATCAGAGGCGGGCACAAATGGAGACATCTACAGTaGCAGGATTCAAAGTCATGGAGAGAGGTTAAGGAAATAAAGGTC +
Preference number: 5 (lower is better)
Translates to: ERVSIRGGHKWRHLQ*QDSKSWREVKEIKV
Trigger: GACCTTTATTTCCTTAACCTCTCTCCATGACTTTGAATCCTGGCACTGTAGATGTCTCCATTTGTGCCCGCCTCTGATCGAGACTCTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601287.1
CDS CCA 72 bp GCGCCCCACAGGGCCCCTCGGGCCACAAACACGGCGTaGTCCCAGTGCTGTGAGGCCTCCAAGAGCTGCCGC +
Preference number: 6 (lower is better)
Translates to: APHRAPRATNTA*SQCCEASKSCR
Trigger: GCGGCAGCTCTTGGAGGCCTCACAGCACTGGGACCACGCCGTGTTTGTGGCCCGAGGGGCCCTGTGGGGCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389208.9
ENST00000593569.1
CDS GCA 72 bp AGGGCCCCTCGGGCCACAAACACGGCGTGGTCCCAGTaGTGTGAGGCCTCCAAGAGCTGCCGCTCTGTGGTC +
Preference number: 6 (lower is better)
Translates to: RAPRATNTAWSQ*CEASKSCRSVV
Trigger: GACCACAGAGCGGCAGCTCTTGGAGGCCTCACAGCACTGGGACCACGCCGTGTTTGTGGCCCGAGGGGCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389208.9
ENST00000593569.1
CDS TCA 72 bp CCCTCGGGCCACAAACACGGCGTGGTCCCAGTGCTGTaGGGCCTCCAAGAGCTGCCGCTCTGTGGTCTGGTC +
Preference number: 6 (lower is better)
Translates to: PSGHKHGVVPVL*GLQELPLCGLV
Trigger: GACCAGACCACAGAGCGGCAGCTCTTGGAGGCCTCACAGCACTGGGACCACGCCGTGTTTGTGGCCCGAGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389208.9
ENST00000593569.1
CDS TCA 72 bp CTCTGTCCCCCATCGTGCCACCAGCTGCCTCCAGTGTaGCGTTCTCGCTCCCACGTCCGTCCCTCCCGTTCC +
Preference number: 6 (lower is better)
Translates to: LCPPSCHQLPPV*RSRSHVRPSRS
Trigger: GGAACGGGAGGGACGGACGTGGGAGCGAGAACGTCACACTGGAGGCAGCTGGTGGCACGATGGGGGACAGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000376916.7
ENST00000593569.1
ENST00000597030.1
ENST00000598657.1
ENST00000601207.5
ENST00000601287.1
CDS CCA 72 bp TCTCTCTGCGGGTGTGCACAGCAAAGCTTCGGCCCGTaGGGCCCCGGGGTCCGCTCAGCTCTACATCCACCA +
Preference number: 6 (lower is better)
Translates to: SLCGCAQQSFGP*GPGVRSALHPP
Trigger: TGGTGGATGTAGAGCTGAGCGGACCCCGGGGCCCCACGGGCCGAAGCTTTGCTGTGCACACCCGCAGAGAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000376916.7
ENST00000389208.9
ENST00000597030.1
ENST00000597232.1
ENST00000601207.5
ENST00000601287.1
CDS GCA 72 bp GCCCAGGAGAAGCCTTCGAGGCCTGGAGAGGCCAAGTaGCCCCAACATGAGCCCCAGCCTCTGTGCCTTGAG +
Preference number: 6 (lower is better)
Translates to: AQEKPSRPGEAK*PQHEPQPLCLE
Trigger: CTCAAGGCACAGAGGCTGGGGCTCATGTTGGGGGCACTTGGCCTCTCCAGGCCTCGAAGGCTTCTCCTGGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000376916.7
ENST00000593569.1
ENST00000597030.1
ENST00000598657.1
ENST00000601287.1
CDS GCA 72 bp GGCGCCTTTCACTCTGTCCCCCATCGTGCCACCAGCTaGCTCCAGTGTGACGTTCTCGCTCCCACGTCCGTC +
Preference number: 6 (lower is better)
Translates to: GAFHSVPHRATS*LQCDVLAPTSV
Trigger: GACGGACGTGGGAGCGAGAACGTCACACTGGAGGCAGCTGGTGGCACGATGGGGGACAGAGTGAAAGGCGCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601207.5
CDS CCA 72 bp AGATCAGGGCGCCTTTCCCCAAGGGCAGCAAGGTTCTaGAGCTGCAGGGAAGGGGGCACGCTCCCTGCCATT +
Preference number: 6 (lower is better)
Translates to: RSGRLSPRAARF*SCREGGTLPAI
Trigger: AATGGCAGGGAGCGTGCCCCCTTCCCTGCAGCTCCAGAACCTTGCTGCCCTTGGGGAAAGGCGCCCTGATCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389208.9
CDS TCA 72 bp CCTCAAGCCGGAAGCCATCGGGGTGTGTGGCCATGGTaGCACGAAGGCTCAGGAGATTGGCATGGCGCAGGA +
Preference number: 6 (lower is better)
Translates to: PQAGSHRGVWPW*HEGSGDWHGAG
Trigger: TCCTGCGCCATGCCAATCTCCTGAGCCTTCGTGTCACCATGGCCACACACCCCGATGGCTTCCGGCTTGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376916.7
ENST00000601207.5
CDS GCA 72 bp GCTACCTTTCACTCTGTCCCCCATCGTGCCACCAGCTaGCTCCAGTGTGACGTTCTCGCTCCCACGTCCGTC +
Preference number: 6 (lower is better)
Translates to: ATFHSVPHRATS*LQCDVLAPTSV
Trigger: GACGGACGTGGGAGCGAGAACGTCACACTGGAGGCAGCTGGTGGCACGATGGGGGACAGAGTGAAAGGTAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376916.7
ENST00000593569.1
ENST00000597030.1
ENST00000598657.1
CDS CCA 72 bp TGCTGTGAGGCCTCCAAGAGCTGCCGCTCTGTGGTCTaGTCACTTAGAGCTGAGGGGGACCCCACCAGGAGA +
Preference number: 6 (lower is better)
Translates to: CCEASKSCRSVV*SLRAEGDPTRR
Trigger: TCTCCTGGTGGGGTCCCCCTCAGCTCTAAGTGACCAGACCACAGAGCGGCAGCTCTTGGAGGCCTCACAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389208.9
ENST00000593569.1
CDS CCA 72 bp GGACTCAGCCCAACACCCTGCTTAGCTCTGCTCACCTaGTATCAGCCACGAGCACCCCAATCACCCCATCGA +
Preference number: 6 (lower is better)
Translates to: GLSPTPCLALLT*YQPRAPQSPHR
Trigger: TCGATGGGGTGATTGGGGTGCTCGTGGCTGATACCAGGTGAGCAGAGCTAAGCAGGGTGTTGGGCTGAGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597232.1
CDS TCA 72 bp CAGACAAAAACAAGTTCTAGGCCAAGTTCTGGTCCCTaGGCCAAGAGGCGGGAGACGAGGGACTGTCCGAGG +
Preference number: 6 (lower is better)
Translates to: QTKTSSRPSSGP*AKRRETRDCPR
Trigger: CCTCGGACAGTCCCTCGTCTCCCGCCTCTTGGCTCAGGGACCAGAACTTGGCCTAGAACTTGTTTTTGTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389208.9
CDS GCA 72 bp GGACCCCACCAGGAGATTGGCATGGCGCAGGATTTGTaGCCCAGATTCATGGATTATTTTGGGATGGGCCAC +
Preference number: 6 (lower is better)
Translates to: GPHQEIGMAQDL*PRFMDYFGMGH
Trigger: GTGGCCCATCCCAAAATAATCCATGAATCTGGGGCACAAATCCTGCGCCATGCCAATCTCCTGGTGGGGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389208.9
ENST00000593569.1
ENST00000598657.1
CDS CCA 72 bp GGCGCAGGATTTGTGCCCCAGATTCATGGATTATTTTaGGATGGGCCACTTCCACAACCAGATCAGGGCGCC +
Preference number: 6 (lower is better)
Translates to: GAGFVPQIHGLF*DGPLPQPDQGA
Trigger: GGCGCCCTGATCTGGTTGTGGAAGTGGCCCATCCCAAAATAATCCATGAATCTGGGGCACAAATCCTGCGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000376916.7
ENST00000389208.9
ENST00000593569.1
ENST00000598657.1
ENST00000601207.5
CDS CAA 72 bp TGGCGCAGGATTTGTGCCCCAGATTCATGGATTATTTaGGGATGGGCCACTTCCACAACCAGATCAGGGCGC +
Preference number: 6 (lower is better)
Translates to: WRRICAPDSWII*GWATSTTRSGR
Trigger: GCGCCCTGATCTGGTTGTGGAAGTGGCCCATCCCAAAATAATCCATGAATCTGGGGCACAAATCCTGCGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376916.7
ENST00000389208.9
ENST00000593569.1
ENST00000598657.1
ENST00000601207.5
CDS CAA 90 bp AGATTGGCATGGCGCAGGATTTGTGCCCCAGATTCATGGATTATTTaGGGATGGGCCACTTCCACAACCAGATCAGGGCGCCTTTCCCCA +
Preference number: 6 (lower is better)
Translates to: RLAWRRICAPDSWII*GWATSTTRSGRLSP
Trigger: TGGGGAAAGGCGCCCTGATCTGGTTGTGGAAGTGGCCCATCCCAAAATAATCCATGAATCTGGGGCACAAATCCTGCGCCATGCCAATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389208.9
CDS GCA 72 bp ACGAAGGCTCAGGAGATTGGCATGGCGCAGGATTTGTaGCCCAGATTCATGGATTATTTTGGGATGGGCCAC +
Preference number: 6 (lower is better)
Translates to: TKAQEIGMAQDL*PRFMDYFGMGH
Trigger: GTGGCCCATCCCAAAATAATCCATGAATCTGGGGCACAAATCCTGCGCCATGCCAATCTCCTGAGCCTTCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376916.7
ENST00000601207.5
CDS CAA 72 bp GACACGAAGGCTCAGGAGATTGGCATGGCGCAGGATTaGTGCCCCAGATTCATGGATTATTTTGGGATGGGC +
Preference number: 6 (lower is better)
Translates to: DTKAQEIGMAQD*CPRFMDYFGMG
Trigger: GCCCATCCCAAAATAATCCATGAATCTGGGGCACAAATCCTGCGCCATGCCAATCTCCTGAGCCTTCGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376916.7
ENST00000601207.5
CDS CAA 90 bp AGATTGGCATGGCGCAGGATTTGTGCCCCAGATTCATGGATTATTTaGGGATGGGCCACTTCCACAACCAGATCAGGGCGCCTTGACTTG +
Preference number: 6 (lower is better)
Translates to: RLAWRRICAPDSWII*GWATSTTRSGRLDL
Trigger: CAAGTCAAGGCGCCCTGATCTGGTTGTGGAAGTGGCCCATCCCAAAATAATCCATGAATCTGGGGCACAAATCCTGCGCCATGCCAATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376916.7
ENST00000593569.1
ENST00000598657.1
CDS CAA 90 bp AGATTGGCATGGCGCAGGATTTGTGCCCCAGATTCATGGATTATTTaGGGATGGGCCACTTCCACAACCAGATCAGGGCGCCTTTCACTC +
Preference number: 6 (lower is better)
Translates to: RLAWRRICAPDSWII*GWATSTTRSGRLSL
Trigger: GAGTGAAAGGCGCCCTGATCTGGTTGTGGAAGTGGCCCATCCCAAAATAATCCATGAATCTGGGGCACAAATCCTGCGCCATGCCAATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601207.5
CDS CCA 72 bp AGGATTTGTGCCCCAGATTCATGGATTATTTTGGGATaGGCCACTTCCACAACCAGATCAGGGCGCCTTTCC +
Preference number: 6 (lower is better)
Translates to: RICAPDSWIILG*ATSTTRSGRLS
Trigger: GGAAAGGCGCCCTGATCTGGTTGTGGAAGTGGCCCATCCCAAAATAATCCATGAATCTGGGGCACAAATCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389208.9
CDS CCA 72 bp AGGATTTGTGCCCCAGATTCATGGATTATTTTGGGATaGGCCACTTCCACAACCAGATCAGGGCGCCTTGAC +
Preference number: 6 (lower is better)
Translates to: RICAPDSWIILG*ATSTTRSGRLD
Trigger: GTCAAGGCGCCCTGATCTGGTTGTGGAAGTGGCCCATCCCAAAATAATCCATGAATCTGGGGCACAAATCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376916.7
ENST00000593569.1
ENST00000598657.1
CDS CCA 72 bp GAGACAGAGAGAGTCTCGATCAGAGGCGGGCACAAATaGAGACATCTACAGTGCCAGGATTCAAAGTCATGG +
Preference number: 6 (lower is better)
Translates to: ETERVSIRGGHK*RHLQCQDSKSW
Trigger: CCATGACTTTGAATCCTGGCACTGTAGATGTCTCCATTTGTGCCCGCCTCTGATCGAGACTCTCTCTGTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601287.1
CDS CCA 72 bp AGGATTTGTGCCCCAGATTCATGGATTATTTTGGGATaGGCCACTTCCACAACCAGATCAGGGCGCCTTTCA +
Preference number: 6 (lower is better)
Translates to: RICAPDSWIILG*ATSTTRSGRLS
Trigger: TGAAAGGCGCCCTGATCTGGTTGTGGAAGTGGCCCATCCCAAAATAATCCATGAATCTGGGGCACAAATCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601207.5
CDS GCA 72 bp TCGATCAGAGGCGGGCACAAATGGAGACATCTACAGTaGCAGGATTCAAAGTCATGGAGAGAGGTTAAGGAA +
Preference number: 6 (lower is better)
Translates to: SIRGGHKWRHLQ*QDSKSWREVKE
Trigger: TTCCTTAACCTCTCTCCATGACTTTGAATCCTGGCACTGTAGATGTCTCCATTTGTGCCCGCCTCTGATCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601287.1