Pregenerated sensors for ASIC5 (Homo sapiens)

Ensembl gene IDs: ENSG00000256394

Ensembl transcript IDs: ENST00000537611.3, ENST00000572394.2

Found 11 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	TCACAAGTGAGACTGAGCCCAGAACCACCACCAACCAGAGCACCCTaGGAATTTTGCTCCGGTTCTGAACAATATTGTGTATCCCATGAA	+
Preference number: 5 (lower is better) Translates to: SQVRLSPEPPPTRAP*EFCSGSEQYCVSHE Trigger: TTCATGGGATACACAATATTGTTCAGAACCGGAGCAAAATTCGCAGGGTGCTCTGGTTGGTGGTGGTTCTGGGCTCAGTCTCACTTGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000537611.3 ENST00000572394.2
CDS CCA 90 bp	GACAACAAGCCTAACCCATCAAACTGTGGCACCTTCTTTGGTGAATaGATAACAAAGATGATCCCAGCATCAACGAAACCAAGGGCTGGG	+
Preference number: 5 (lower is better) Translates to: DNKPNPSNCGTFFGE*ITKMIPASTKPRAG Trigger: CCCAGCCCTTGGTTTCGTTGATGCTGGGATCATCTTTGTTATCCATTCACCAAAGAAGGTGCCACAGTTTGATGGGTTAGGCTTGTTGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000537611.3 ENST00000572394.2
CDS CCA 90 bp	TTTTGCTCCGGTTCTGAACAATATTGTGTATCCCATGAAAGGAAGTaGAGATGGCAAAGTCATGGTCAAACTTCTTTCGCTCAGTGGGAG	+
Preference number: 5 (lower is better) Translates to: FCSGSEQYCVSHERK*RWQSHGQTSFAQWE Trigger: CTCCCACTGAGCGAAAGAAGTTTGACCATGACTTTGCCATCTCCACTTCCTTTCATGGGATACACAATATTGTTCAGAACCGGAGCAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000537611.3 ENST00000572394.2
CDS CCA 90 bp	GAACTCCATCTTTTCCACATATTGAACCTCAATGGACGTTGTGGTTaGCCATGTGAAGTAGTTGAGCAAGCGAATGTAGATCTGCCATGT	+
Preference number: 5 (lower is better) Translates to: ELHLFHILNLNGRCG*PCEVVEQANVDLPC Trigger: ACATGGCAGATCTACATTCGCTTGCTCAACTACTTCACATGGCCAACCACAACGTCCATTGAGGTTCAATATGTGGAAAAGATGGAGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000537611.3 ENST00000572394.2
CDS CCA 90 bp	AGGAAGTGGAGATGGCAAAGTCATGGTCAAACTTCTTTCGCTCAGTaGGAGATGGCAGTGGTTTCTTTGAAAGGCAAAGCTTTATCTTTT	+
Preference number: 5 (lower is better) Translates to: RKWRWQSHGQTSFAQ*EMAVVSLKGKALSF Trigger: AAAAGATAAAGCTTTGCCTTTCAAAGAAACCACTGCCATCTCCCACTGAGCGAAAGAAGTTTGACCATGACTTTGCCATCTCCACTTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000537611.3 ENST00000572394.2
CDS CCA 72 bp	AGATGGCAAAGTCATGGTCAAACTTCTTTCGCTCAGTaGGAGATGGCAGTGGTTTCTTTGAAAGGCAAAGCT	+
Preference number: 6 (lower is better) Translates to: RWQSHGQTSFAQ*EMAVVSLKGKA Trigger: AGCTTTGCCTTTCAAAGAAACCACTGCCATCTCCCACTGAGCGAAAGAAGTTTGACCATGACTTTGCCATCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000537611.3 ENST00000572394.2
CDS CCA 72 bp	CCTAACCCATCAAACTGTGGCACCTTCTTTGGTGAATaGATAACAAAGATGATCCCAGCATCAACGAAACCA	+
Preference number: 6 (lower is better) Translates to: PNPSNCGTFFGE*ITKMIPASTKP Trigger: TGGTTTCGTTGATGCTGGGATCATCTTTGTTATCCATTCACCAAAGAAGGTGCCACAGTTTGATGGGTTAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000537611.3 ENST00000572394.2
CDS CAA 90 bp	CATGGTCAAACTTCTTTCGCTCAGTGGGAGATGGCAGTGGTTTCTTaGAAAGGCAAAGCTTTATCTTTTCTAAGAGTCCGTTCTCAGCAT	+
Preference number: 6 (lower is better) Translates to: HGQTSFAQWEMAVVS*KGKALSFLRVRSQH Trigger: ATGCTGAGAACGGACTCTTAGAAAAGATAAAGCTTTGCCTTTCAAAGAAACCACTGCCATCTCCCACTGAGCGAAAGAAGTTTGACCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000537611.3 ENST00000572394.2
CDS CCA 72 bp	CTTTTCCACATATTGAACCTCAATGGACGTTGTGGTTaGCCATGTGAAGTAGTTGAGCAAGCGAATGTAGAT	+
Preference number: 6 (lower is better) Translates to: LFHILNLNGRCG*PCEVVEQANVD Trigger: ATCTACATTCGCTTGCTCAACTACTTCACATGGCCAACCACAACGTCCATTGAGGTTCAATATGTGGAAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000537611.3 ENST00000572394.2
CDS CAA 90 bp	GAGATAAAAACCTTTGTTCCTGATAAATTCCACAATGCTGAAGTTTaGGTGACTTGCAGCAAAATCAGTAGCCTCTCTAGAGCCAGTGGA	+
Preference number: 6 (lower is better) Translates to: EIKTFVPDKFHNAEV*VTCSKISSLSRASG Trigger: TCCACTGGCTCTAGAGAGGCTACTGATTTTGCTGCAAGTCACCAAAACTTCAGCATTGTGGAATTTATCAGGAACAAAGGTTTTTATCTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000537611.3 ENST00000572394.2
CDS CAA 72 bp	ACCTTTGTTCCTGATAAATTCCACAATGCTGAAGTTTaGGTGACTTGCAGCAAAATCAGTAGCCTCTCTAGA	+
Preference number: 6 (lower is better) Translates to: TFVPDKFHNAEV*VTCSKISSLSR Trigger: TCTAGAGAGGCTACTGATTTTGCTGCAAGTCACCAAAACTTCAGCATTGTGGAATTTATCAGGAACAAAGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000537611.3 ENST00000572394.2

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