RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ASIC2 (Homo sapiens)

Ensembl gene IDs: ENSG00000108684

Ensembl transcript IDs: ENST00000225823.7, ENST00000359872.6, ENST00000448983.1, ENST00000579816.1, ENST00000583395.1

Found 395 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGTGACTCATCTCTCCTAAGAGGGACGCACGGCGGGGCCCAAGGATaGGTCGTGTTGGACGTGGCCGGAGCGAGGTCTAGGCAGCTAGTC +
Preference number: 1 (lower is better)
Translates to: CDSSLLRGTHGGAQG*VVLDVAGARSRQLV
Trigger: GACTAGCTGCCTAGACCTCGCTCCGGCCACGTCCAACACGACGCATCCTTGGGCCCCGCCGTGCGTCCCTCTTAGGAGAGATGAGTCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
3UTR GCA 90 bp CCAGGGTGGCCTCATGGTGACTTTGGACCTGGAATCTGGTCCCACTaGACGGGCAGCAGTGTGGACACTGGAAACCGCGTGGAGGAGTGT +
Preference number: 1 (lower is better)
Translates to: PGWPHGDFGPGIWSH*TGSSVDTGNRVEEC
Trigger: ACACTCCTCCACGCGGTTTCCAGTGTCCACACTGCTGCCCGTGCAGTGGGACCAGATTCCAGGTCCAAAGTCACCATGAGGCCACCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
3UTR CCA 90 bp ACTGGGGCCATCCCACCTGAGCTTGCTGTTCCTTGTCCTGGGTCTTaGGCCTCAAGGTCTGTTTGGAGGGAGTGCTGGGTGACTCGAGGG +
Preference number: 1 (lower is better)
Translates to: TGAIPPELAVPCPGS*ASRSVWRECWVTRG
Trigger: CCCTCGAGTCACCCAGCACTCCCTCCAAACAGACCTTGAGGCCCAAGACCCAGGACAAGGAACAGCAAGCTCAGGTGGGATGGCCCCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
3UTR CCA 90 bp TCTGGTCCCACTGCACGGGCAGCAGTGTGGACACTGGAAACCGCGTaGAGGAGTGTCATGTACAAGACAGACGTGGAGGTGGCGCCACAA +
Preference number: 1 (lower is better)
Translates to: SGPTARAAVWTLETA*RSVMYKTDVEVAPQ
Trigger: TTGTGGCGCCACCTCCACGTCTGTCTTGTACATGACACTCCTCCACGCGGTTTCCAGTGTCCACACTGCTGCCCGTGCAGTGGGACCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
3UTR CCA 90 bp TGGACCTGGAATCTGGTCCCACTGCACGGGCAGCAGTGTGGACACTaGAAACCGCGTGGAGGAGTGTCATGTACAAGACAGACGTGGAGG +
Preference number: 1 (lower is better)
Translates to: WTWNLVPLHGQQCGH*KPRGGVSCTRQTWR
Trigger: CCTCCACGTCTGTCTTGTACATGACACTCCTCCACGCGGTTTCCAGTGTCCACACTGCTGCCCGTGCAGTGGGACCAGATTCCAGGTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
3UTR CCA 90 bp GTTCTGATTCCAGGGTGGCCTCATGGTGACTTTGGACCTGGAATCTaGTCCCACTGCACGGGCAGCAGTGTGGACACTGGAAACCGCGTG +
Preference number: 1 (lower is better)
Translates to: VLIPGWPHGDFGPGI*SHCTGSSVDTGNRV
Trigger: CACGCGGTTTCCAGTGTCCACACTGCTGCCCGTGCAGTGGGACCAGATTCCAGGTCCAAAGTCACCATGAGGCCACCCTGGAATCAGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
3UTR GCA 90 bp GCGAGGTCTAGGCAGCTAGTCTGCAATGTGTGCATAGGGGGCTCTTaGTTCTTTCCAGCACTGGGGCCATCCCACCTGAGCTTGCTGTTC +
Preference number: 1 (lower is better)
Translates to: ARSRQLVCNVCIGGS*FFPALGPSHLSLLF
Trigger: GAACAGCAAGCTCAGGTGGGATGGCCCCAGTGCTGGAAAGAAGCAAGAGCCCCCTATGCACACATTGCAGACTAGCTGCCTAGACCTCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
3UTR CCA 90 bp AGAATCAGACTGTACAAGCTGTGTCACAGGGAGAGAAGAACGACATaGGCACCATGGGTGAACACAGGCGTCCCCCACCCGCTGGCTGCT +
Preference number: 1 (lower is better)
Translates to: RIRLYKLCHRERRTT*APWVNTGVPHPLAA
Trigger: AGCAGCCAGCGGGTGGGGGACGCCTGTGTTCACCCATGGTGCCCATGTCGTTCTTCTCTCCCTGTGACACAGCTTGTACAGTCTGATTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
3UTR CCA 90 bp GTGACTTTGGACCTGGAATCTGGTCCCACTGCACGGGCAGCAGTGTaGACACTGGAAACCGCGTGGAGGAGTGTCATGTACAAGACAGAC +
Preference number: 1 (lower is better)
Translates to: VTLDLESGPTARAAV*TLETAWRSVMYKTD
Trigger: GTCTGTCTTGTACATGACACTCCTCCACGCGGTTTCCAGTGTCCACACTGCTGCCCGTGCAGTGGGACCAGATTCCAGGTCCAAAGTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
3UTR CCA 90 bp GAGTCCCATGGGTTCCCTCTTGATTGTGCAGTTCTGATTCCAGGGTaGCCTCATGGTGACTTTGGACCTGGAATCTGGTCCCACTGCACG +
Preference number: 1 (lower is better)
Translates to: ESHGFPLDCAVLIPG*PHGDFGPGIWSHCT
Trigger: CGTGCAGTGGGACCAGATTCCAGGTCCAAAGTCACCATGAGGCCACCCTGGAATCAGAACTGCACAATCAAGAGGGAACCCATGGGACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
3UTR CCA 90 bp GGACACTGGAAACCGCGTGGAGGAGTGTCATGTACAAGACAGACGTaGAGGTGGCGCCACAAGAAGTCTGAGCATGCAGGTGCTTTATAC +
Preference number: 1 (lower is better)
Translates to: GHWKPRGGVSCTRQT*RWRHKKSEHAGALY
Trigger: GTATAAAGCACCTGCATGCTCAGACTTCTTGTGGCGCCACCTCCACGTCTGTCTTGTACATGACACTCCTCCACGCGGTTTCCAGTGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
3UTR CCA 90 bp TGGAAACCGCGTGGAGGAGTGTCATGTACAAGACAGACGTGGAGGTaGCGCCACAAGAAGTCTGAGCATGCAGGTGCTTTATACATCTGG +
Preference number: 1 (lower is better)
Translates to: WKPRGGVSCTRQTWR*RHKKSEHAGALYIW
Trigger: CCAGATGTATAAAGCACCTGCATGCTCAGACTTCTTGTGGCGCCACCTCCACGTCTGTCTTGTACATGACACTCCTCCACGCGGTTTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
3UTR TCA 90 bp AATGTAGCAGAGAGTCCCATGGGTTCCCTCTTGATTGTGCAGTTCTaGTTCCAGGGTGGCCTCATGGTGACTTTGGACCTGGAATCTGGT +
Preference number: 1 (lower is better)
Translates to: NVAESPMGSLLIVQF*FQGGLMVTLDLESG
Trigger: ACCAGATTCCAGGTCCAAAGTCACCATGAGGCCACCCTGGAATCAGAACTGCACAATCAAGAGGGAACCCATGGGACTCTCTGCTACATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
3UTR CAA 90 bp TCTCTCCTAAGAGGGACGCACGGCGGGGCCCAAGGATGCGTCGTGTaGGACGTGGCCGGAGCGAGGTCTAGGCAGCTAGTCTGCAATGTG +
Preference number: 2 (lower is better)
Translates to: SLLRGTHGGAQGCVV*DVAGARSRQLVCNV
Trigger: CACATTGCAGACTAGCTGCCTAGACCTCGCTCCGGCCACGTCCAACACGACGCATCCTTGGGCCCCGCCGTGCGTCCCTCTTAGGAGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
3UTR-3UTR GCA 90 bp GACAGACGTGGAGGTGGCGCCACAAGAAGTCTGAGCATGCAGGTGCTTTATACAGGCGGGGCCCAAGGATaGGTCGTGTTGGACGTGGCC +
Preference number: 2 (lower is better)
Translates to: DRRGGGATRSLSMQVLYTGGAQG*VVLDVA
Trigger: GGCCACGTCCAACACGACGCATCCTTGGGCCCCGCC...TGTATAAAGCACCTGCATGCTCAGACTTCTTGTGGCGCCACCTCCACGTCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
3UTR-3UTR CCA 90 bp TCATCTCTCCTAAGAGGGACGCACGGCGGGGCCCAAGGATGCGTCGTGTTGGACGCCTCAAGGTCTGTTTaGAGGGAGTGCTGGGTGACT +
Preference number: 2 (lower is better)
Translates to: SSLLRGTHGGAQGCVVLDASRSV*RECWVT
Trigger: AGTCACCCAGCACTCCCTCCAAACAGACCTTGAGGC...GTCCAACACGACGCATCCTTGGGCCCCGCCGTGCGTCCCTCTTAGGAGAGATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
3UTR CAA 90 bp GGGGGCTCTTGCTTCTTTCCAGCACTGGGGCCATCCCACCTGAGCTaGCTGTTCCTTGTCCTGGGTCTTGGGCCTCAAGGTCTGTTTGGA +
Preference number: 2 (lower is better)
Translates to: GGSCFFPALGPSHLS*LFLVLGLGPQGLFG
Trigger: TCCAAACAGACCTTGAGGCCCAAGACCCAGGACAAGGAACAGCAAGCTCAGGTGGGATGGCCCCAGTGCTGGAAAGAAGCAAGAGCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
3UTR-3UTR TCA 90 bp GTGGACACTGGAAACCGCGTGGAGGAGTGTCATGTACAAGACAGACGTGGAGGTTGGGGCCATCCCACCTaGGCTTGCTGTTCCTTGTCC +
Preference number: 2 (lower is better)
Translates to: VDTGNRVEECHVQDRRGGWGHPT*ACCSLS
Trigger: GGACAAGGAACAGCAAGCTCAGGTGGGATGGCCCCA...ACCTCCACGTCTGTCTTGTACATGACACTCCTCCACGCGGTTTCCAGTGTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
3UTR-3UTR GCA 90 bp CAAGAACTGAATGTAGCAGAGAGTCCCATGGGTTCCCTCTTGATTGTGCAGTTCGGCGGGGCCCAAGGATaGGTCGTGTTGGACGTGGCC +
Preference number: 2 (lower is better)
Translates to: QELNVAESPMGSLLIVQFGGAQG*VVLDVA
Trigger: GGCCACGTCCAACACGACGCATCCTTGGGCCCCGCC...GAACTGCACAATCAAGAGGGAACCCATGGGACTCTCTGCTACATTCAGTTCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
3UTR-3UTR CCA 90 bp AGACAGACGTGGAGGTGGCGCCACAAGAAGTCTGAGCATGCAGGTGCTTTATACAAGGATGCGTCGTGTTaGACGTGGCCGGAGCGAGGT +
Preference number: 2 (lower is better)
Translates to: RQTWRWRHKKSEHAGALYKDASC*TWPERG
Trigger: ACCTCGCTCCGGCCACGTCCAACACGACGCATCCTT...GTATAAAGCACCTGCATGCTCAGACTTCTTGTGGCGCCACCTCCACGTCTGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
3UTR-3UTR CCA 90 bp GACAGACGTGGAGGTGGCGCCACAAGAAGTCTGAGCATGCAGGTGCTTTATACAAAGGATGCGTCGTGTTaGACGTGGCCGGAGCGAGGT +
Preference number: 2 (lower is better)
Translates to: DRRGGGATRSLSMQVLYTKDASC*TWPERG
Trigger: ACCTCGCTCCGGCCACGTCCAACACGACGCATCCTT...TGTATAAAGCACCTGCATGCTCAGACTTCTTGTGGCGCCACCTCCACGTCTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
3UTR-3UTR GCA 90 bp GACAGACGTGGAGGTGGCGCCACAAGAAGTCTGAGCATGCAGGTGCTTTATACATCTGTTTGGAGGGAGTaGTGGGTGACTCGAGGGGTG +
Preference number: 2 (lower is better)
Translates to: DRRGGGATRSLSMQVLYTSVWRE*WVTRGV
Trigger: CACCCCTCGAGTCACCCAGCACTCCCTCCAAACAGA...TGTATAAAGCACCTGCATGCTCAGACTTCTTGTGGCGCCACCTCCACGTCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
3UTR-3UTR GCA 90 bp GCAGTGTGGACACTGGAAACCGCGTGGAGGAGTGTCATGTACAAGACAGACGTGTGCATAGGGGGCTCTTaGTTCTTTCCAGCACTGGGG +
Preference number: 2 (lower is better)
Translates to: AVWTLETAWRSVMYKTDVCIGGS*FFPALG
Trigger: CCCCAGTGCTGGAAAGAAGCAAGAGCCCCCTATGCA...CACGTCTGTCTTGTACATGACACTCCTCCACGCGGTTTCCAGTGTCCACACTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
3UTR-3UTR CCA 90 bp GTGGACACTGGAAACCGCGTGGAGGAGTGTCATGTACAAGACAGACGTGGAGGTTGCTGTTCCTTGTCCTaGGTCTTGGGCCTCAAGGTC +
Preference number: 2 (lower is better)
Translates to: VDTGNRVEECHVQDRRGGCCSLS*VLGLKV
Trigger: GACCTTGAGGCCCAAGACCCAGGACAAGGAACAGCA...ACCTCCACGTCTGTCTTGTACATGACACTCCTCCACGCGGTTTCCAGTGTCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
3UTR-3UTR GCA 90 bp ACAAGACAGACGTGGAGGTGGCGCCACAAGAAGTCTGAGCATGCAGGTGCTTTATGCATAGGGGGCTCTTaGTTCTTTCCAGCACTGGGG +
Preference number: 2 (lower is better)
Translates to: TRQTWRWRHKKSEHAGALCIGGS*FFPALG
Trigger: CCCCAGTGCTGGAAAGAAGCAAGAGCCCCCTATGCA...TAAAGCACCTGCATGCTCAGACTTCTTGTGGCGCCACCTCCACGTCTGTCTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
3UTR-3UTR CCA 90 bp AGACAGACGTGGAGGTGGCGCCACAAGAAGTCTGAGCATGCAGGTGCTTTATACCCTTGTCCTGGGTCTTaGGCCTCAAGGTCTGTTTGG +
Preference number: 2 (lower is better)
Translates to: RQTWRWRHKKSEHAGALYPCPGS*ASRSVW
Trigger: CCAAACAGACCTTGAGGCCCAAGACCCAGGACAAGG...GTATAAAGCACCTGCATGCTCAGACTTCTTGTGGCGCCACCTCCACGTCTGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
3UTR-3UTR TCA 90 bp AGACAGACGTGGAGGTGGCGCCACAAGAAGTCTGAGCATGCAGGTGCTTTATACTCTGGCAGTGAGATGTaGTGGCAGGTTCGTTCTTGG +
Preference number: 2 (lower is better)
Translates to: RQTWRWRHKKSEHAGALYSGSEM*WQVRSW
Trigger: CCAAGAACGAACCTGCCATCACATCTCACTGCCAGA...GTATAAAGCACCTGCATGCTCAGACTTCTTGTGGCGCCACCTCCACGTCTGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
3UTR-3UTR CCA 90 bp TGTACAAGACAGACGTGGAGGTGGCGCCACAAGAAGTCTGAGCATGCAGGTGCTTGGCAGGTTCGTTCTTaGACAGTTCCAGAGTGTGAC +
Preference number: 2 (lower is better)
Translates to: CTRQTWRWRHKKSEHAGAWQVRS*TVPECD
Trigger: GTCACACTCTGGAACTGTCCAAGAACGAACCTGCCA...AGCACCTGCATGCTCAGACTTCTTGTGGCGCCACCTCCACGTCTGTCTTGTACA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
3UTR-3UTR TCA 90 bp GACAGACGTGGAGGTGGCGCCACAAGAAGTCTGAGCATGCAGGTGCTTTATACAGACAGTTCCAGAGTGTaGCTCATCTCTCCTAAGAGG +
Preference number: 2 (lower is better)
Translates to: DRRGGGATRSLSMQVLYTDSSRV*LISPKR
Trigger: CCTCTTAGGAGAGATGAGTCACACTCTGGAACTGTC...TGTATAAAGCACCTGCATGCTCAGACTTCTTGTGGCGCCACCTCCACGTCTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
3UTR-3UTR GCA 90 bp AGACAGACGTGGAGGTGGCGCCACAAGAAGTCTGAGCATGCAGGTGCTTTATACCTAGTCTGCAATGTGTaGATAGGGGGCTCTTGCTTC +
Preference number: 2 (lower is better)
Translates to: RQTWRWRHKKSEHAGALYLVCNV*IGGSCF
Trigger: GAAGCAAGAGCCCCCTATGCACACATTGCAGACTAG...GTATAAAGCACCTGCATGCTCAGACTTCTTGTGGCGCCACCTCCACGTCTGTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
3UTR-3UTR GCA 90 bp CTTGATTGTGCAGTTCTGATTCCAGGGTGGCCTCATGGTGACTTTGGACCTGGATCTAGGCAGCTAGTCTaGAATGTGTGCATAGGGGGC +
Preference number: 2 (lower is better)
Translates to: LDCAVLIPGWPHGDFGPGSRQLV*NVCIGG
Trigger: GCCCCCTATGCACACATTGCAGACTAGCTGCCTAGA...TCCAGGTCCAAAGTCACCATGAGGCCACCCTGGAATCAGAACTGCACAATCAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
3UTR-3UTR GCA 90 bp CTGGCAGTGAGATGTGATGGCAGGTTCGTTCTTGGACAGTTCCAGAGTGTGACTTCTAGGCAGCTAGTCTaGAATGTGTGCATAGGGGGC +
Preference number: 2 (lower is better)
Translates to: LAVRCDGRFVLGQFQSVTSRQLV*NVCIGG
Trigger: GCCCCCTATGCACACATTGCAGACTAGCTGCCTAGA...AGTCACACTCTGGAACTGTCCAAGAACGAACCTGCCATCACATCTCACTGCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
3UTR-3UTR GCA 90 bp CTGGCAGTGAGATGTGATGGCAGGTTCGTTCTTGGACAGTTCCAGAGTGTGACTCTAGTCTGCAATGTGTaGATAGGGGGCTCTTGCTTC +
Preference number: 2 (lower is better)
Translates to: LAVRCDGRFVLGQFQSVTLVCNV*IGGSCF
Trigger: GAAGCAAGAGCCCCCTATGCACACATTGCAGACTAG...AGTCACACTCTGGAACTGTCCAAGAACGAACCTGCCATCACATCTCACTGCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
3UTR-3UTR CCA 90 bp CTTGATTGTGCAGTTCTGATTCCAGGGTGGCCTCATGGTGACTTTGGACCTGGATGGCAGGTTCGTTCTTaGACAGTTCCAGAGTGTGAC +
Preference number: 2 (lower is better)
Translates to: LDCAVLIPGWPHGDFGPGWQVRS*TVPECD
Trigger: GTCACACTCTGGAACTGTCCAAGAACGAACCTGCCA...TCCAGGTCCAAAGTCACCATGAGGCCACCCTGGAATCAGAACTGCACAATCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
3UTR GCA 72 bp TCTCTCCTAAGAGGGACGCACGGCGGGGCCCAAGGATaGGTCGTGTTGGACGTGGCCGGAGCGAGGTCTAGG +
Preference number: 3 (lower is better)
Translates to: SLLRGTHGGAQG*VVLDVAGARSR
Trigger: CCTAGACCTCGCTCCGGCCACGTCCAACACGACGCATCCTTGGGCCCCGCCGTGCGTCCCTCTTAGGAGAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
3UTR-3UTR CAA 90 bp GACCTGGAATCTGGTCCCACTGCACGGGCAGCAGTGTGGACACTGGAAACCGCGGGCCTCAAGGTCTGTTaGGAGGGAGTGCTGGGTGAC +
Preference number: 3 (lower is better)
Translates to: DLESGPTARAAVWTLETAGLKVC*EGVLGD
Trigger: GTCACCCAGCACTCCCTCCAAACAGACCTTGAGGCC...CGCGGTTTCCAGTGTCCACACTGCTGCCCGTGCAGTGGGACCAGATTCCAGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
3UTR CCA 72 bp CTGTGTCACAGGGAGAGAAGAACGACATGGGCACCATaGGTGAACACAGGCGTCCCCCACCCGCTGGCTGCT +
Preference number: 3 (lower is better)
Translates to: LCHRERRTTWAP*VNTGVPHPLAA
Trigger: AGCAGCCAGCGGGTGGGGGACGCCTGTGTTCACCCATGGTGCCCATGTCGTTCTTCTCTCCCTGTGACACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
3UTR-3UTR CAA 90 bp TCATCTCTCCTAAGAGGGACGCACGGCGGGGCCCAAGGATGCGTCGTGTTGGACGTGCATAGGGGGCTCTaGCTTCTTTCCAGCACTGGG +
Preference number: 3 (lower is better)
Translates to: SSLLRGTHGGAQGCVVLDVHRGL*LLSSTG
Trigger: CCCAGTGCTGGAAAGAAGCAAGAGCCCCCTATGCAC...GTCCAACACGACGCATCCTTGGGCCCCGCCGTGCGTCCCTCTTAGGAGAGATGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
3UTR CCA 72 bp CCAGGGTGGCCTCATGGTGACTTTGGACCTGGAATCTaGTCCCACTGCACGGGCAGCAGTGTGGACACTGGA +
Preference number: 3 (lower is better)
Translates to: PGWPHGDFGPGI*SHCTGSSVDTG
Trigger: TCCAGTGTCCACACTGCTGCCCGTGCAGTGGGACCAGATTCCAGGTCCAAAGTCACCATGAGGCCACCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
3UTR-3UTR CAA 90 bp TCATCTCTCCTAAGAGGGACGCACGGCGGGGCCCAAGGATGCGTCGTGTTGGACTCCTTGTCCTGGGTCTaGGGCCTCAAGGTCTGTTTG +
Preference number: 3 (lower is better)
Translates to: SSLLRGTHGGAQGCVVLDSLSWV*GLKVCL
Trigger: CAAACAGACCTTGAGGCCCAAGACCCAGGACAAGGA...GTCCAACACGACGCATCCTTGGGCCCCGCCGTGCGTCCCTCTTAGGAGAGATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
3UTR-3UTR CAA 90 bp GTGGACACTGGAAACCGCGTGGAGGAGTGTCATGTACAAGACAGACGTGGAGGTCAAGGATGCGTCGTGTaGGACGTGGCCGGAGCGAGG +
Preference number: 3 (lower is better)
Translates to: VDTGNRVEECHVQDRRGGQGCVV*DVAGAR
Trigger: CCTCGCTCCGGCCACGTCCAACACGACGCATCCTTG...ACCTCCACGTCTGTCTTGTACATGACACTCCTCCACGCGGTTTCCAGTGTCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
3UTR TCA 72 bp GCTCTTGCTTCTTTCCAGCACTGGGGCCATCCCACCTaGGCTTGCTGTTCCTTGTCCTGGGTCTTGGGCCTC +
Preference number: 3 (lower is better)
Translates to: ALASFQHWGHPT*ACCSLSWVLGL
Trigger: GAGGCCCAAGACCCAGGACAAGGAACAGCAAGCTCAGGTGGGATGGCCCCAGTGCTGGAAAGAAGCAAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
3UTR GCA 72 bp CCTCATGGTGACTTTGGACCTGGAATCTGGTCCCACTaGACGGGCAGCAGTGTGGACACTGGAAACCGCGTG +
Preference number: 3 (lower is better)
Translates to: PHGDFGPGIWSH*TGSSVDTGNRV
Trigger: CACGCGGTTTCCAGTGTCCACACTGCTGCCCGTGCAGTGGGACCAGATTCCAGGTCCAAAGTCACCATGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
3UTR CCA 72 bp CTGTACAAGCTGTGTCACAGGGAGAGAAGAACGACATaGGCACCATGGGTGAACACAGGCGTCCCCCACCCG +
Preference number: 3 (lower is better)
Translates to: LYKLCHRERRTT*APWVNTGVPHP
Trigger: CGGGTGGGGGACGCCTGTGTTCACCCATGGTGCCCATGTCGTTCTTCTCTCCCTGTGACACAGCTTGTACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
3UTR TCA 72 bp GTGATGGCAGGTTCGTTCTTGGACAGTTCCAGAGTGTaGCTCATCTCTCCTAAGAGGGACGCACGGCGGGGC +
Preference number: 3 (lower is better)
Translates to: VMAGSFLDSSRV*LISPKRDARRG
Trigger: GCCCCGCCGTGCGTCCCTCTTAGGAGAGATGAGTCACACTCTGGAACTGTCCAAGAACGAACCTGCCATCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
3UTR GCA 72 bp AGGCAGCTAGTCTGCAATGTGTGCATAGGGGGCTCTTaGTTCTTTCCAGCACTGGGGCCATCCCACCTGAGC +
Preference number: 3 (lower is better)
Translates to: RQLVCNVCIGGS*FFPALGPSHLS
Trigger: GCTCAGGTGGGATGGCCCCAGTGCTGGAAAGAAGCAAGAGCCCCCTATGCACACATTGCAGACTAGCTGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
3UTR CCA 72 bp ATCCCACCTGAGCTTGCTGTTCCTTGTCCTGGGTCTTaGGCCTCAAGGTCTGTTTGGAGGGAGTGCTGGGTG +
Preference number: 3 (lower is better)
Translates to: IPPELAVPCPGS*ASRSVWRECWV
Trigger: CACCCAGCACTCCCTCCAAACAGACCTTGAGGCCCAAGACCCAGGACAAGGAACAGCAAGCTCAGGTGGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
3UTR CCA 72 bp ACTGCACGGGCAGCAGTGTGGACACTGGAAACCGCGTaGAGGAGTGTCATGTACAAGACAGACGTGGAGGTG +
Preference number: 3 (lower is better)
Translates to: TARAAVWTLETA*RSVMYKTDVEV
Trigger: CACCTCCACGTCTGTCTTGTACATGACACTCCTCCACGCGGTTTCCAGTGTCCACACTGCTGCCCGTGCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
3UTR-3UTR CAA 90 bp GACAGACGTGGAGGTGGCGCCACAAGAAGTCTGAGCATGCAGGTGCTTTATACAGGCCTCAAGGTCTGTTaGGAGGGAGTGCTGGGTGAC +
Preference number: 3 (lower is better)
Translates to: DRRGGGATRSLSMQVLYTGLKVC*EGVLGD
Trigger: GTCACCCAGCACTCCCTCCAAACAGACCTTGAGGCC...TGTATAAAGCACCTGCATGCTCAGACTTCTTGTGGCGCCACCTCCACGTCTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
3UTR-3UTR CAA 90 bp GTGGACACTGGAAACCGCGTGGAGGAGTGTCATGTACAAGACAGACGTGGAGGTGTGCATAGGGGGCTCTaGCTTCTTTCCAGCACTGGG +
Preference number: 3 (lower is better)
Translates to: VDTGNRVEECHVQDRRGGVHRGL*LLSSTG
Trigger: CCCAGTGCTGGAAAGAAGCAAGAGCCCCCTATGCAC...ACCTCCACGTCTGTCTTGTACATGACACTCCTCCACGCGGTTTCCAGTGTCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
3UTR CCA 72 bp AAACCGCGTGGAGGAGTGTCATGTACAAGACAGACGTaGAGGTGGCGCCACAAGAAGTCTGAGCATGCAGGT +
Preference number: 3 (lower is better)
Translates to: KPRGGVSCTRQT*RWRHKKSEHAG
Trigger: ACCTGCATGCTCAGACTTCTTGTGGCGCCACCTCCACGTCTGTCTTGTACATGACACTCCTCCACGCGGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
3UTR TCA 72 bp GAGAGTCCCATGGGTTCCCTCTTGATTGTGCAGTTCTaGTTCCAGGGTGGCCTCATGGTGACTTTGGACCTG +
Preference number: 3 (lower is better)
Translates to: ESPMGSLLIVQF*FQGGLMVTLDL
Trigger: CAGGTCCAAAGTCACCATGAGGCCACCCTGGAATCAGAACTGCACAATCAAGAGGGAACCCATGGGACTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
3UTR CCA 72 bp CGTGGAGGAGTGTCATGTACAAGACAGACGTGGAGGTaGCGCCACAAGAAGTCTGAGCATGCAGGTGCTTTA +
Preference number: 3 (lower is better)
Translates to: RGGVSCTRQTWR*RHKKSEHAGAL
Trigger: TAAAGCACCTGCATGCTCAGACTTCTTGTGGCGCCACCTCCACGTCTGTCTTGTACATGACACTCCTCCACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
3UTR CCA 72 bp GGGTTCCCTCTTGATTGTGCAGTTCTGATTCCAGGGTaGCCTCATGGTGACTTTGGACCTGGAATCTGGTCC +
Preference number: 3 (lower is better)
Translates to: GFPLDCAVLIPG*PHGDFGPGIWS
Trigger: GGACCAGATTCCAGGTCCAAAGTCACCATGAGGCCACCCTGGAATCAGAACTGCACAATCAAGAGGGAACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
3UTR TCA 72 bp TACAAGACAGACGTGGAGGTGGCGCCACAAGAAGTCTaGGCATGCAGGTGCTTTATACATCTGGCAGTGAGA +
Preference number: 3 (lower is better)
Translates to: YKTDVEVAPQEV*ACRCFIHLAVR
Trigger: TCTCACTGCCAGATGTATAAAGCACCTGCATGCTCAGACTTCTTGTGGCGCCACCTCCACGTCTGTCTTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR TCA 90 bp GACCTGGAATCTGGTCCCACTGCACGGGCAGCAGTGTGGACACTGGAAACCGCGCCCGCAGCAGCTCGCTaGCAAGCGGGCGCGCGGTGC +
Preference number: 4 (lower is better)
Translates to: DLESGPTARAAVWTLETAPAAAR*QAGARC
Trigger: GCACCGCGCGCCCGCTTGTCAGCGAGCTGCTGCGGG...CGCGGTTTCCAGTGTCCACACTGCTGCCCGTGCAGTGGGACCAGATTCCAGGTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225823.7
CDS-3UTR CCA 90 bp GACCTGGAATCTGGTCCCACTGCACGGGCAGCAGTGTGGACACTGGAAACCGCGCGAAAGGAGCTCCGGTaGCGCGGCATGCCCGCCCGG +
Preference number: 4 (lower is better)
Translates to: DLESGPTARAAVWTLETARKELR*RGMPAR
Trigger: CCGGGCGGGCATGCCGCGCCACCGGAGCTCCTTTCG...CGCGGTTTCCAGTGTCCACACTGCTGCCCGTGCAGTGGGACCAGATTCCAGGTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225823.7
3UTR CAA 72 bp AGAGGGACGCACGGCGGGGCCCAAGGATGCGTCGTGTaGGACGTGGCCGGAGCGAGGTCTAGGCAGCTAGTC +
Preference number: 4 (lower is better)
Translates to: RGTHGGAQGCVV*DVAGARSRQLV
Trigger: GACTAGCTGCCTAGACCTCGCTCCGGCCACGTCCAACACGACGCATCCTTGGGCCCCGCCGTGCGTCCCTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR GCA 90 bp TCATCTCTCCTAAGAGGGACGCACGGCGGGGCCCAAGGATGCGTCGTGTTGGACCGGCTCCACTCGCGGTaGACCCGCGTGTGTGACGGG +
Preference number: 4 (lower is better)
Translates to: SSLLRGTHGGAQGCVVLDRLHSR*TRVCDG
Trigger: CCCGTCACACACGCGGGTGCACCGCGAGTGGAGCCG...GTCCAACACGACGCATCCTTGGGCCCCGCCGTGCGTCCCTCTTAGGAGAGATGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225823.7
CDS-3UTR GCA 90 bp TGGACCTGGAATCTGGTCCCACTGCACGGGCAGCAGTGTGGACACTGGAAACCGCAAGCGGGCGCGCGGTaGGGTTGGGCAGCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: WTWNLVPLHGQQCGHWKPQAGAR*GWAAAA
Trigger: GGCTGCTGCTGCCCAACCGCACCGCGCGCCCGCTTG...CGGTTTCCAGTGTCCACACTGCTGCCCGTGCAGTGGGACCAGATTCCAGGTCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225823.7
CDS-3UTR CCA 90 bp GACCTGGAATCTGGTCCCACTGCACGGGCAGCAGTGTGGACACTGGAAACCGCGGGCGCGGGTCACCTTTaGCGCCGAAGCCCCATGGGC +
Preference number: 4 (lower is better)
Translates to: DLESGPTARAAVWTLETAGAGHL*RRSPMG
Trigger: GCCCATGGGGCTTCGGCGCCAAAGGTGACCCGCGCC...CGCGGTTTCCAGTGTCCACACTGCTGCCCGTGCAGTGGGACCAGATTCCAGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR CCA 90 bp TGGGTCTTGGGCCTCAAGGTCTGTTTGGAGGGAGTGCTGGGTGACTCGAGGGGTGCTGGGCGGGCGGGGTaGGTGTGTACGGGGGTGAGT +
Preference number: 4 (lower is better)
Translates to: WVLGLKVCLEGVLGDSRGAGRAG*VCTGVS
Trigger: ACTCACCCCCGTACACACCCACCCCGCCCGCCCAGC...ACCCCTCGAGTCACCCAGCACTCCCTCCAAACAGACCTTGAGGCCCAAGACCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000225823.7
CDS-3UTR CCA 90 bp TCATCTCTCCTAAGAGGGACGCACGGCGGGGCCCAAGGATGCGTCGTGTTGGACCGCCTTCCCTCGTCCTaGACCTCGGGGGACCCTGAG +
Preference number: 4 (lower is better)
Translates to: SSLLRGTHGGAQGCVVLDRLPSS*TSGDPE
Trigger: CTCAGGGTCCCCCGAGGTCCAGGACGAGGGAAGGCG...GTCCAACACGACGCATCCTTGGGCCCCGCCGTGCGTCCCTCTTAGGAGAGATGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000225823.7
CDS-3UTR TCA 90 bp GACCTGGAATCTGGTCCCACTGCACGGGCAGCAGTGTGGACACTGGAAACCGCGGGAGGGAGTGCTGGGTaGCTCGAGGGGTGTCAGCAG +
Preference number: 4 (lower is better)
Translates to: DLESGPTARAAVWTLETAGGSAG*LEGCQQ
Trigger: CTGCTGACACCCCTCGAGTCACCCAGCACTCCCTCC...CGCGGTTTCCAGTGTCCACACTGCTGCCCGTGCAGTGGGACCAGATTCCAGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR GCA 90 bp TGGACCTGGAATCTGGTCCCACTGCACGGGCAGCAGTGTGGACACTGGAAACCGGGCGGGGCCCAAGGATaGGTCGTGTTGGACGTGGCC +
Preference number: 4 (lower is better)
Translates to: WTWNLVPLHGQQCGHWKPGGAQG*VVLDVA
Trigger: GGCCACGTCCAACACGACGCATCCTTGGGCCCCGCC...CGGTTTCCAGTGTCCACACTGCTGCCCGTGCAGTGGGACCAGATTCCAGGTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR TCA 90 bp GACCTGGAATCTGGTCCCACTGCACGGGCAGCAGTGTGGACACTGGAAACCGCGGTGGGGGCAGGTATGTaGGCCTCTGCTCCTGTGTGG +
Preference number: 4 (lower is better)
Translates to: DLESGPTARAAVWTLETAVGAGM*ASAPVW
Trigger: CCACACAGGAGCAGAGGCTCACATACCTGCCCCCAC...CGCGGTTTCCAGTGTCCACACTGCTGCCCGTGCAGTGGGACCAGATTCCAGGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR TCA 90 bp AGCTTGCTGTTCCTTGTCCTGGGTCTTGGGCCTCAAGGTCTGTTTGGAGGGAGTTCAGGGCGGCCACGCTaGTGCACTGCGGTCGGGCGC +
Preference number: 4 (lower is better)
Translates to: SLLFLVLGLGPQGLFGGSSGRPR*CTAVGR
Trigger: GCGCCCGACCGCAGTGCATCAGCGTGGCCGCCCTGA...ACTCCCTCCAAACAGACCTTGAGGCCCAAGACCCAGGACAAGGAACAGCAAGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359872.6
CDS-3UTR GCA 90 bp TGTTCCTTGTCCTGGGTCTTGGGCCTCAAGGTCTGTTTGGAGGGAGTGCTGGGTCGCGCCAGGGAAGCGTaGGCCCGAAAGGAGCTCCGG +
Preference number: 4 (lower is better)
Translates to: CSLSWVLGLKVCLEGVLGRAREA*ARKELR
Trigger: CCGGAGCTCCTTTCGGGCGCACGCTTCCCTGGCGCG...ACCCAGCACTCCCTCCAAACAGACCTTGAGGCCCAAGACCCAGGACAAGGAACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225823.7
CDS-3UTR GCA 90 bp GAGCTTGCTGTTCCTTGTCCTGGGTCTTGGGCCTCAAGGTCTGTTTGGAGGGAGCCCCCACCCGCTGGCTaGTGTGCCGCCGTCATAGGC +
Preference number: 4 (lower is better)
Translates to: ELAVPCPGSWASRSVWREPPPAG*CAAVIG
Trigger: GCCTATGACGGCGGCACAGCAGCCAGCGGGTGGGGG...CTCCCTCCAAACAGACCTTGAGGCCCAAGACCCAGGACAAGGAACAGCAAGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR CCA 90 bp GCAGTGTGGACACTGGAAACCGCGTGGAGGAGTGTCATGTACAAGACAGACGTGCGCGGCGACAAGAGCTaGGGACTGCGGGGACCCGCC +
Preference number: 4 (lower is better)
Translates to: AVWTLETAWRSVMYKTDVRGDKS*GLRGPA
Trigger: GGCGGGTCCCCGCAGTCCCCAGCTCTTGTCGCCGCG...CACGTCTGTCTTGTACATGACACTCCTCCACGCGGTTTCCAGTGTCCACACTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225823.7
CDS-3UTR CCA 90 bp GCAGTGTGGACACTGGAAACCGCGTGGAGGAGTGTCATGTACAAGACAGACGTGGGCCCCTGGTCTTCCTaGAGGATGCCCGGCGCCCGG +
Preference number: 4 (lower is better)
Translates to: AVWTLETAWRSVMYKTDVGPWSS*RMPGAR
Trigger: CCGGGCGCCGGGCATCCTCCAGGAAGACCAGGGGCC...CACGTCTGTCTTGTACATGACACTCCTCCACGCGGTTTCCAGTGTCCACACTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225823.7
CDS-3UTR CCA 90 bp TGGGTCTTGGGCCTCAAGGTCTGTTTGGAGGGAGTGCTGGGTGACTCGAGGGGTGGCTTTCCCGGCCCCTaGTCTTCCTGGAGGATGCCC +
Preference number: 4 (lower is better)
Translates to: WVLGLKVCLEGVLGDSRGGFPGP*SSWRMP
Trigger: GGGCATCCTCCAGGAAGACCAGGGGCCGGGAAAGCC...ACCCCTCGAGTCACCCAGCACTCCCTCCAAACAGACCTTGAGGCCCAAGACCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000225823.7
CDS-3UTR CCA 90 bp TGTTCCTTGTCCTGGGTCTTGGGCCTCAAGGTCTGTTTGGAGGGAGTGCTGGGTAGCTTGCGGAACCACTaGCGGCGCGGCTCGTCGCCC +
Preference number: 4 (lower is better)
Translates to: CSLSWVLGLKVCLEGVLGSLRNH*RRGSSP
Trigger: GGGCGACGAGCCGCGCCGCCAGTGGTTCCGCAAGCT...ACCCAGCACTCCCTCCAAACAGACCTTGAGGCCCAAGACCCAGGACAAGGAACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225823.7
CDS-3UTR CCA 90 bp TGGGTCTTGGGCCTCAAGGTCTGTTTGGAGGGAGTGCTGGGTGACTCGAGGGGTGAGGGGTCAGCCAGATaGGGGTCCGGGATCTGCAGG +
Preference number: 4 (lower is better)
Translates to: WVLGLKVCLEGVLGDSRGEGSAR*GSGICR
Trigger: CCTGCAGATCCCGGACCCCCATCTGGCTGACCCCTC...ACCCCTCGAGTCACCCAGCACTCCCTCCAAACAGACCTTGAGGCCCAAGACCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359872.6
CDS-3UTR TCA 90 bp AGCTTGCTGTTCCTTGTCCTGGGTCTTGGGCCTCAAGGTCTGTTTGGAGGGAGTAACACCTCCCGGGGGTaGCCCGGACTCGCTGCTCCG +
Preference number: 4 (lower is better)
Translates to: SLLFLVLGLGPQGLFGGSNTSRG*PGLAAP
Trigger: CGGAGCAGCGAGTCCGGGTCACCCCCGGGAGGTGTT...ACTCCCTCCAAACAGACCTTGAGGCCCAAGACCCAGGACAAGGAACAGCAAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000225823.7
CDS-3UTR TCA 90 bp TGGACCTGGAATCTGGTCCCACTGCACGGGCAGCAGTGTGGACACTGGAAACCGGTGCACCCGCGTGTGTaGCGGGAAGCTGAGCCAGTA +
Preference number: 4 (lower is better)
Translates to: WTWNLVPLHGQQCGHWKPVHPRV*REAEPV
Trigger: TACTGGCTCAGCTTCCCGTCACACACGCGGGTGCAC...CGGTTTCCAGTGTCCACACTGCTGCCCGTGCAGTGGGACCAGATTCCAGGTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225823.7
CDS-3UTR GCA 90 bp TGGACCTGGAATCTGGTCCCACTGCACGGGCAGCAGTGTGGACACTGGAAACCGACAAGAGCTGGGGACTaGGGGGACCCGCCAACACCT +
Preference number: 4 (lower is better)
Translates to: WTWNLVPLHGQQCGHWKPTRAGD*GDPPTP
Trigger: AGGTGTTGGCGGGTCCCCGCAGTCCCCAGCTCTTGT...CGGTTTCCAGTGTCCACACTGCTGCCCGTGCAGTGGGACCAGATTCCAGGTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000225823.7
CDS-3UTR GCA 90 bp GAGCTTGCTGTTCCTTGTCCTGGGTCTTGGGCCTCAAGGTCTGTTTGGAGGGAGCTTCTCAGGGCGTCCTaGGGGAGGCTGTTCGCCGCC +
Preference number: 4 (lower is better)
Translates to: ELAVPCPGSWASRSVWRELLRAS*GRLFAA
Trigger: GGCGGCGAACAGCCTCCCGCAGGACGCCCTGAGAAG...CTCCCTCCAAACAGACCTTGAGGCCCAAGACCCAGGACAAGGAACAGCAAGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225823.7
CDS-3UTR GCA 90 bp TGTACAAGACAGACGTGGAGGTGGCGCCACAAGAAGTCTGAGCATGCAGGTGCTCCTGCGCCTAAGTCCTaGCAGGCGCCCGCTCTCGCC +
Preference number: 4 (lower is better)
Translates to: CTRQTWRWRHKKSEHAGAPAPKS*QAPALA
Trigger: GGCGAGAGCGGGCGCCTGGCAGGACTTAGGCGCAGG...AGCACCTGCATGCTCAGACTTCTTGTGGCGCCACCTCCACGTCTGTCTTGTACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225823.7
CDS-3UTR GCA 90 bp GAGCTTGCTGTTCCTTGTCCTGGGTCTTGGGCCTCAAGGTCTGTTTGGAGGGAGTCTCCAGTCCCTGGGTaGTGCGCCCGCCTTCCCTCG +
Preference number: 4 (lower is better)
Translates to: ELAVPCPGSWASRSVWRESPVPG*CARLPS
Trigger: CGAGGGAAGGCGGGCGCAGCACCCAGGGACTGGAGA...CTCCCTCCAAACAGACCTTGAGGCCCAAGACCCAGGACAAGGAACAGCAAGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225823.7
CDS-3UTR GCA 90 bp TGGGTCTTGGGCCTCAAGGTCTGTTTGGAGGGAGTGCTGGGTGACTCGAGGGGTATGTGCCGCAGCCCGTaGAGTTTAGCGCGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: WVLGLKVCLEGVLGDSRGMCRSP*SLARLS
Trigger: GCTGAGCCGCGCTAAACTGCACGGGCTGCGGCACAT...ACCCCTCGAGTCACCCAGCACTCCCTCCAAACAGACCTTGAGGCCCAAGACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225823.7
CDS-3UTR GCA 90 bp ACAAGACAGACGTGGAGGTGGCGCCACAAGAAGTCTGAGCATGCAGGTGCTTTAAGCCCCCAGCCGCCGTaGGCCCGGCACACATGTGCC +
Preference number: 4 (lower is better)
Translates to: TRQTWRWRHKKSEHAGALSPQPP*ARHTCA
Trigger: GGCACATGTGTGCCGGGCGCACGGCGGCTGGGGGCT...TAAAGCACCTGCATGCTCAGACTTCTTGTGGCGCCACCTCCACGTCTGTCTTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000225823.7
CDS-3UTR GCA 90 bp TGGGTCTTGGGCCTCAAGGTCTGTTTGGAGGGAGTGCTGGGTGACTCGAGGGGTGTCCCCAGGGTCGTCTaGAGGGGCACGTTCACAGTG +
Preference number: 4 (lower is better)
Translates to: WVLGLKVCLEGVLGDSRGVPRVV*RGTFTV
Trigger: CACTGTGAACGTGCCCCTGCAGACGACCCTGGGGAC...ACCCCTCGAGTCACCCAGCACTCCCTCCAAACAGACCTTGAGGCCCAAGACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR GCA 90 bp GAGCTTGCTGTTCCTTGTCCTGGGTCTTGGGCCTCAAGGTCTGTTTGGAGGGAGGGCGGGGCCCAAGGATaGGTCGTGTTGGACGTGGCC +
Preference number: 4 (lower is better)
Translates to: ELAVPCPGSWASRSVWREGGAQG*VVLDVA
Trigger: GGCCACGTCCAACACGACGCATCCTTGGGCCCCGCC...CTCCCTCCAAACAGACCTTGAGGCCCAAGACCCAGGACAAGGAACAGCAAGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR GCA 90 bp CAGCAGTGTGGACACTGGAAACCGCGTGGAGGAGTGTCATGTACAAGACAGACGGCCACGCTGATGCACTaGGGTCGGGCGCAGCGGCAC +
Preference number: 4 (lower is better)
Translates to: QQCGHWKPRGGVSCTRQTATLMH*GRAQRH
Trigger: GTGCCGCTGCGCCCGACCGCAGTGCATCAGCGTGGC...CGTCTGTCTTGTACATGACACTCCTCCACGCGGTTTCCAGTGTCCACACTGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359872.6
CDS-3UTR CCA 90 bp AGACAGACGTGGAGGTGGCGCCACAAGAAGTCTGAGCATGCAGGTGCTTTATACCGACGCTGGCGCGGCTaGGCTCCGAGCACCTGCTCC +
Preference number: 4 (lower is better)
Translates to: RQTWRWRHKKSEHAGALYRRWRG*APSTCS
Trigger: GGAGCAGGTGCTCGGAGCCCAGCCGCGCCAGCGTCG...GTATAAAGCACCTGCATGCTCAGACTTCTTGTGGCGCCACCTCCACGTCTGTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225823.7
CDS-3UTR CCA 90 bp TCATCTCTCCTAAGAGGGACGCACGGCGGGGCCCAAGGATGCGTCGTGTTGGACCTTTTACGCTGGTCCTaGGAGAAGGGCCACTCGGCC +
Preference number: 4 (lower is better)
Translates to: SSLLRGTHGGAQGCVVLDLLRWS*EKGHSA
Trigger: GGCCGAGTGGCCCTTCTCCCAGGACCAGCGTAAAAG...GTCCAACACGACGCATCCTTGGGCCCCGCCGTGCGTCCCTCTTAGGAGAGATGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000225823.7
CDS-3UTR CCA 90 bp TGTACAAGACAGACGTGGAGGTGGCGCCACAAGAAGTCTGAGCATGCAGGTGCTCGCCTCTCCAGTCCCTaGGTGCTGCGCCCGCCTTCC +
Preference number: 4 (lower is better)
Translates to: CTRQTWRWRHKKSEHAGARLSSP*VLRPPS
Trigger: GGAAGGCGGGCGCAGCACCCAGGGACTGGAGAGGCG...AGCACCTGCATGCTCAGACTTCTTGTGGCGCCACCTCCACGTCTGTCTTGTACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225823.7
CDS-3UTR CCA 90 bp TGGACCTGGAATCTGGTCCCACTGCACGGGCAGCAGTGTGGACACTGGAAACCGGCACTCACCCCACGGTaGGGGCAGGTATGTGAGCCT +
Preference number: 4 (lower is better)
Translates to: WTWNLVPLHGQQCGHWKPALTPR*GQVCEP
Trigger: AGGCTCACATACCTGCCCCCACCGTGGGGTGAGTGC...CGGTTTCCAGTGTCCACACTGCTGCCCGTGCAGTGGGACCAGATTCCAGGTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR CCA 90 bp TCATCTCTCCTAAGAGGGACGCACGGCGGGGCCCAAGGATGCGTCGTGTTGGACACAGCACACGCCGGATaGTCAGCGGCCCATACACGA +
Preference number: 4 (lower is better)
Translates to: SSLLRGTHGGAQGCVVLDTAHAG*SAAHTR
Trigger: TCGTGTATGGGCCGCTGACCATCCGGCGTGTGCTGT...GTCCAACACGACGCATCCTTGGGCCCCGCCGTGCGTCCCTCTTAGGAGAGATGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359872.6
CDS-3UTR TCA 90 bp CAGCAGTGTGGACACTGGAAACCGCGTGGAGGAGTGTCATGTACAAGACAGACGAGCTCGCGGTGGCCGTaGCGCCGGCTAAGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: QQCGHWKPRGGVSCTRQTSSRWP*RRLSSF
Trigger: GAAGGAGCTTAGCCGGCGTCACGGCCACCGCGAGCT...CGTCTGTCTTGTACATGACACTCCTCCACGCGGTTTCCAGTGTCCACACTGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225823.7
CDS-3UTR TCA 90 bp TGTACAAGACAGACGTGGAGGTGGCGCCACAAGAAGTCTGAGCATGCAGGTGCTGCTCTCGCCTGGGGCTaGGAGCTTCTCAGGGCGTCC +
Preference number: 4 (lower is better)
Translates to: CTRQTWRWRHKKSEHAGAALAWG*ELLRAS
Trigger: GGACGCCCTGAGAAGCTCTCAGCCCCAGGCGAGAGC...AGCACCTGCATGCTCAGACTTCTTGTGGCGCCACCTCCACGTCTGTCTTGTACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225823.7
CDS-3UTR GCA 90 bp TGTACAAGACAGACGTGGAGGTGGCGCCACAAGAAGTCTGAGCATGCAGGTGCTGTGACCCGGACTCGCTaGTCCGCGCGCCCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: CTRQTWRWRHKKSEHAGAVTRTR*SARPSP
Trigger: AGGAGAAGGGCGCGCGGAGCAGCGAGTCCGGGTCAC...AGCACCTGCATGCTCAGACTTCTTGTGGCGCCACCTCCACGTCTGTCTTGTACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225823.7
CDS-3UTR GCA 90 bp TGGACCTGGAATCTGGTCCCACTGCACGGGCAGCAGTGTGGACACTGGAAACCGCGCTCGGCAGAGACCTaGTTAGGCTTCCCCAAGTCC +
Preference number: 4 (lower is better)
Translates to: WTWNLVPLHGQQCGHWKPRSAET*LGFPKS
Trigger: GGACTTGGGGAAGCCTAAGCAGGTCTCTGCCGAGCG...CGGTTTCCAGTGTCCACACTGCTGCCCGTGCAGTGGGACCAGATTCCAGGTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225823.7
CDS-3UTR GCA 90 bp TGGGTCTTGGGCCTCAAGGTCTGTTTGGAGGGAGTGCTGGGTGACTCGAGGGGTGGAATCTGGTCCCACTaGACGGGCAGCAGTGTGGAC +
Preference number: 4 (lower is better)
Translates to: WVLGLKVCLEGVLGDSRGGIWSH*TGSSVD
Trigger: GTCCACACTGCTGCCCGTGCAGTGGGACCAGATTCC...ACCCCTCGAGTCACCCAGCACTCCCTCCAAACAGACCTTGAGGCCCAAGACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR GCA 90 bp TCATCTCTCCTAAGAGGGACGCACGGCGGGGCCCAAGGATGCGTCGTGTTGGACTCATGGCCCACACGGTaGAGGAACTCCAGCATGCTG +
Preference number: 4 (lower is better)
Translates to: SSLLRGTHGGAQGCVVLDSWPTR*RNSSML
Trigger: CAGCATGCTGGAGTTCCTGCACCGTGTGGGCCATGA...GTCCAACACGACGCATCCTTGGGCCCCGCCGTGCGTCCCTCTTAGGAGAGATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359872.6
CDS-3UTR CCA 90 bp TGGACCTGGAATCTGGTCCCACTGCACGGGCAGCAGTGTGGACACTGGAAACCGCTTGTTACTGCTCCCTaGGCTGCGCTCGGCAGAGAC +
Preference number: 4 (lower is better)
Translates to: WTWNLVPLHGQQCGHWKPLVTAP*AALGRD
Trigger: GTCTCTGCCGAGCGCAGCCCAGGGAGCAGTAACAAG...CGGTTTCCAGTGTCCACACTGCTGCCCGTGCAGTGGGACCAGATTCCAGGTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225823.7
CDS-3UTR CCA 90 bp GAGCTTGCTGTTCCTTGTCCTGGGTCTTGGGCCTCAAGGTCTGTTTGGAGGGAGGTAGCCCAGCGGTGCTaGGACACGGGAGAGAAGGCG +
Preference number: 4 (lower is better)
Translates to: ELAVPCPGSWASRSVWREVAQRC*DTGEKA
Trigger: CGCCTTCTCTCCCGTGTCCCAGCACCGCTGGGCTAC...CTCCCTCCAAACAGACCTTGAGGCCCAAGACCCAGGACAAGGAACAGCAAGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225823.7
CDS-3UTR CCA 90 bp ACAAGACAGACGTGGAGGTGGCGCCACAAGAAGTCTGAGCATGCAGGTGCTTTACGGGCGGAGCCGCCATaGGAGTCCGCAGCAGCAGTG +
Preference number: 4 (lower is better)
Translates to: TRQTWRWRHKKSEHAGALRAEPP*ESAAAV
Trigger: CACTGCTGCTGCGGACTCCCATGGCGGCTCCGCCCG...TAAAGCACCTGCATGCTCAGACTTCTTGTGGCGCCACCTCCACGTCTGTCTTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225823.7
CDS-3UTR CCA 90 bp TGGGTCTTGGGCCTCAAGGTCTGTTTGGAGGGAGTGCTGGGTGACTCGAGGGGTCTGATTCCCTCGAAGTaGCGCGGAGGCAGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: WVLGLKVCLEGVLGDSRGLIPSK*RGGRKR
Trigger: CCTCTTCCTGCCTCCGCGCCACTTCGAGGGAATCAG...ACCCCTCGAGTCACCCAGCACTCCCTCCAAACAGACCTTGAGGCCCAAGACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225823.7
CDS-3UTR CCA 90 bp GACCTGGAATCTGGTCCCACTGCACGGGCAGCAGTGTGGACACTGGAAACCGCGTTTGGACCTGGAATCTaGTCCCACTGCACGGGCAGC +
Preference number: 4 (lower is better)
Translates to: DLESGPTARAAVWTLETAFGPGI*SHCTGS
Trigger: GCTGCCCGTGCAGTGGGACCAGATTCCAGGTCCAAA...CGCGGTTTCCAGTGTCCACACTGCTGCCCGTGCAGTGGGACCAGATTCCAGGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR TCA 90 bp TGTTCCTTGTCCTGGGTCTTGGGCCTCAAGGTCTGTTTGGAGGGAGTGCTGGGTGTCGAGGCCCATCTCTaGGGATCGGCACTCACCCCA +
Preference number: 4 (lower is better)
Translates to: CSLSWVLGLKVCLEGVLGVEAHL*GSALTP
Trigger: TGGGGTGAGTGCCGATCCTCAGAGATGGGCCTCGAC...ACCCAGCACTCCCTCCAAACAGACCTTGAGGCCCAAGACCCAGGACAAGGAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR TCA 90 bp AGCTTGCTGTTCCTTGTCCTGGGTCTTGGGCCTCAAGGTCTGTTTGGAGGGAGTGGAGGGAGTGCTGGGTaGCTCGAGGGGTGTCAGCAG +
Preference number: 4 (lower is better)
Translates to: SLLFLVLGLGPQGLFGGSGGSAG*LEGCQQ
Trigger: CTGCTGACACCCCTCGAGTCACCCAGCACTCCCTCC...ACTCCCTCCAAACAGACCTTGAGGCCCAAGACCCAGGACAAGGAACAGCAAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR TCA 90 bp GTGGACACTGGAAACCGCGTGGAGGAGTGTCATGTACAAGACAGACGTGGAGGTCATGGGCACCATGGGTaGACACAGGCGTCCCCCACC +
Preference number: 4 (lower is better)
Translates to: VDTGNRVEECHVQDRRGGHGHHG*TQASPT
Trigger: GGTGGGGGACGCCTGTGTTCACCCATGGTGCCCATG...ACCTCCACGTCTGTCTTGTACATGACACTCCTCCACGCGGTTTCCAGTGTCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR TCA 90 bp AGCTTGCTGTTCCTTGTCCTGGGTCTTGGGCCTCAAGGTCTGTTTGGAGGGAGTCATGGGCACCATGGGTaGACACAGGCGTCCCCCACC +
Preference number: 4 (lower is better)
Translates to: SLLFLVLGLGPQGLFGGSHGHHG*TQASPT
Trigger: GGTGGGGGACGCCTGTGTTCACCCATGGTGCCCATG...ACTCCCTCCAAACAGACCTTGAGGCCCAAGACCCAGGACAAGGAACAGCAAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR GCA 90 bp GTGGACACTGGAAACCGCGTGGAGGAGTGTCATGTACAAGACAGACGTGGAGGTCCCGTAGCCCAGCGGTaGTGGGACACGGGAGAGAAG +
Preference number: 4 (lower is better)
Translates to: VDTGNRVEECHVQDRRGGPVAQR*WDTGEK
Trigger: CTTCTCTCCCGTGTCCCAGCACCGCTGGGCTACGGG...ACCTCCACGTCTGTCTTGTACATGACACTCCTCCACGCGGTTTCCAGTGTCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225823.7
CDS-3UTR GCA 90 bp GTGGACACTGGAAACCGCGTGGAGGAGTGTCATGTACAAGACAGACGTGGAGGTACGGAGGAGAAGTTGTaGGGCCCGCAGAGCTCGCCG +
Preference number: 4 (lower is better)
Translates to: VDTGNRVEECHVQDRRGGTEEKL*GPQSSP
Trigger: CGGCGAGCTCTGCGGGCCGCACAACTTCTCCTCCGT...ACCTCCACGTCTGTCTTGTACATGACACTCCTCCACGCGGTTTCCAGTGTCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225823.7
CDS-3UTR GCA 90 bp GACCTGGAATCTGGTCCCACTGCACGGGCAGCAGTGTGGACACTGGAAACCGCGTGTAGCGGGTTAGGTTaGAGGGTGTCCTGCAGAGAC +
Preference number: 4 (lower is better)
Translates to: DLESGPTARAAVWTLETACSGLG*RVSCRD
Trigger: GTCTCTGCAGGACACCCTGCAACCTAACCCGCTACA...CGCGGTTTCCAGTGTCCACACTGCTGCCCGTGCAGTGGGACCAGATTCCAGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR GCA 90 bp GTGGACACTGGAAACCGCGTGGAGGAGTGTCATGTACAAGACAGACGTGGAGGTACCCGCTGGCTGCTGTaGCGCCGTCATAGGCACTGG +
Preference number: 4 (lower is better)
Translates to: VDTGNRVEECHVQDRRGGTRWLL*RRHRHW
Trigger: CCAGTGCCTATGACGGCGGCACAGCAGCCAGCGGGT...ACCTCCACGTCTGTCTTGTACATGACACTCCTCCACGCGGTTTCCAGTGTCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR GCA 90 bp CTTGATTGTGCAGTTCTGATTCCAGGGTGGCCTCATGGTGACTTTGGACCTGGACCCCCACCCGCTGGCTaGTGTGCCGCCGTCATAGGC +
Preference number: 4 (lower is better)
Translates to: LDCAVLIPGWPHGDFGPGPPPAG*CAAVIG
Trigger: GCCTATGACGGCGGCACAGCAGCCAGCGGGTGGGGG...TCCAGGTCCAAAGTCACCATGAGGCCACCCTGGAATCAGAACTGCACAATCAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR GCA 90 bp TGGACCTGGAATCTGGTCCCACTGCACGGGCAGCAGTGTGGACACTGGAAACCGGGGCAGAATTCCAAATaGCAGCGGCCGCTGCTAGCA +
Preference number: 4 (lower is better)
Translates to: WTWNLVPLHGQQCGHWKPGQNSK*QRPLLA
Trigger: TGCTAGCAGCGGCCGCTGGCATTTGGAATTCTGCCC...CGGTTTCCAGTGTCCACACTGCTGCCCGTGCAGTGGGACCAGATTCCAGGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359872.6
CDS-3UTR GCA 90 bp TGGACCTGGAATCTGGTCCCACTGCACGGGCAGCAGTGTGGACACTGGAAACCGCGAAGATGTGGCGGATaGCATGGAGGGTGGAGGTGT +
Preference number: 4 (lower is better)
Translates to: WTWNLVPLHGQQCGHWKPRRCGG*HGGWRC
Trigger: ACACCTCCACCCTCCATGGCATCCGCCACATCTTCG...CGGTTTCCAGTGTCCACACTGCTGCCCGTGCAGTGGGACCAGATTCCAGGTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359872.6
CDS-3UTR GCA 90 bp AGCTTGCTGTTCCTTGTCCTGGGTCTTGGGCCTCAAGGTCTGTTTGGAGGGAGTGCCCACGAAGGCCACTaGCCACAGCACACGCCGGAT +
Preference number: 4 (lower is better)
Translates to: SLLFLVLGLGPQGLFGGSAHEGH*PQHTPD
Trigger: ATCCGGCGTGTGCTGTGGGCAGTGGCCTTCGTGGGC...ACTCCCTCCAAACAGACCTTGAGGCCCAAGACCCAGGACAAGGAACAGCAAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359872.6
CDS-3UTR CCA 90 bp GAGCTTGCTGTTCCTTGTCCTGGGTCTTGGGCCTCAAGGTCTGTTTGGAGGGAGAGCATGTCCTCCAGCTaGTGGCCCAGGCGGTCCATG +
Preference number: 4 (lower is better)
Translates to: ELAVPCPGSWASRSVWRESMSSS*WPRRSM
Trigger: CATGGACCGCCTGGGCCACCAGCTGGAGGACATGCT...CTCCCTCCAAACAGACCTTGAGGCCCAAGACCCAGGACAAGGAACAGCAAGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225823.7
CDS-3UTR CCA 90 bp TCATCTCTCCTAAGAGGGACGCACGGCGGGGCCCAAGGATGCGTCGTGTTGGACCCTTGTCCTGGGTCTTaGGCCTCAAGGTCTGTTTGG +
Preference number: 4 (lower is better)
Translates to: SSLLRGTHGGAQGCVVLDPCPGS*ASRSVW
Trigger: CCAAACAGACCTTGAGGCCCAAGACCCAGGACAAGG...GTCCAACACGACGCATCCTTGGGCCCCGCCGTGCGTCCCTCTTAGGAGAGATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR CCA 90 bp CTTGATTGTGCAGTTCTGATTCCAGGGTGGCCTCATGGTGACTTTGGACCTGGAGCGTCCCCCACCCGCTaGCTGCTGTGCCGCCGTCAT +
Preference number: 4 (lower is better)
Translates to: LDCAVLIPGWPHGDFGPGASPTR*LLCRRH
Trigger: ATGACGGCGGCACAGCAGCCAGCGGGTGGGGGACGC...TCCAGGTCCAAAGTCACCATGAGGCCACCCTGGAATCAGAACTGCACAATCAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR CCA 90 bp CTGGCAGTGAGATGTGATGGCAGGTTCGTTCTTGGACAGTTCCAGAGTGTGACTGCGTCCCCCACCCGCTaGCTGCTGTGCCGCCGTCAT +
Preference number: 4 (lower is better)
Translates to: LAVRCDGRFVLGQFQSVTASPTR*LLCRRH
Trigger: ATGACGGCGGCACAGCAGCCAGCGGGTGGGGGACGC...AGTCACACTCTGGAACTGTCCAAGAACGAACCTGCCATCACATCTCACTGCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR TCA 90 bp GCAGTGTGGACACTGGAAACCGCGTGGAGGAGTGTCATGTACAAGACAGACGTGGTGGGGGCAGGTATGTaGGCCTCTGCTCCTGTGTGG +
Preference number: 4 (lower is better)
Translates to: AVWTLETAWRSVMYKTDVVGAGM*ASAPVW
Trigger: CCACACAGGAGCAGAGGCTCACATACCTGCCCCCAC...CACGTCTGTCTTGTACATGACACTCCTCCACGCGGTTTCCAGTGTCCACACTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR TCA 90 bp AGCTTGCTGTTCCTTGTCCTGGGTCTTGGGCCTCAAGGTCTGTTTGGAGGGAGTCACTGGGGCTTTCCTTaGGGTCCATCGGGACCCCGT +
Preference number: 4 (lower is better)
Translates to: SLLFLVLGLGPQGLFGGSHWGFP*GPSGPR
Trigger: ACGGGGTCCCGATGGACCTCAAGGAAAGCCCCAGTG...ACTCCCTCCAAACAGACCTTGAGGCCCAAGACCCAGGACAAGGAACAGCAAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359872.6
CDS-3UTR TCA 90 bp TCATCTCTCCTAAGAGGGACGCACGGCGGGGCCCAAGGATGCGTCGTGTTGGACTGGGTTTGTAGTGCTTaGAGTTGGCCTTCTGCCGCA +
Preference number: 4 (lower is better)
Translates to: SSLLRGTHGGAQGCVVLDWVCSA*SWPSAA
Trigger: TGCGGCAGAAGGCCAACTTCAAGCACTACAAACCCA...GTCCAACACGACGCATCCTTGGGCCCCGCCGTGCGTCCCTCTTAGGAGAGATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359872.6
CDS-3UTR GCA 90 bp CTTGATTGTGCAGTTCTGATTCCAGGGTGGCCTCATGGTGACTTTGGACCTGGATGGGCTCCGAGCACCTaGTCCTCAGCTCGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: LDCAVLIPGWPHGDFGPGWAPST*SSARWP
Trigger: GGGCCAGCGAGCTGAGGAGCAGGTGCTCGGAGCCCA...TCCAGGTCCAAAGTCACCATGAGGCCACCCTGGAATCAGAACTGCACAATCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225823.7
CDS-3UTR GCA 90 bp AGCTTGCTGTTCCTTGTCCTGGGTCTTGGGCCTCAAGGTCTGTTTGGAGGGAGTTACTGCTCCCTGGGCTaGGCTCGGCAGAGACCTGCT +
Preference number: 4 (lower is better)
Translates to: SLLFLVLGLGPQGLFGGSYCSLG*ARQRPA
Trigger: AGCAGGTCTCTGCCGAGCGCAGCCCAGGGAGCAGTA...ACTCCCTCCAAACAGACCTTGAGGCCCAAGACCCAGGACAAGGAACAGCAAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225823.7
CDS-3UTR GCA 90 bp AGCTTGCTGTTCCTTGTCCTGGGTCTTGGGCCTCAAGGTCTGTTTGGAGGGAGTCGCCCGGCACACATGTaGCGCAGCCCGTGCAGTTTA +
Preference number: 4 (lower is better)
Translates to: SLLFLVLGLGPQGLFGGSRPAHM*RSPCSL
Trigger: TAAACTGCACGGGCTGCGGCACATGTGTGCCGGGCG...ACTCCCTCCAAACAGACCTTGAGGCCCAAGACCCAGGACAAGGAACAGCAAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225823.7
CDS-3UTR GCA 90 bp GACCTGGAATCTGGTCCCACTGCACGGGCAGCAGTGTGGACACTGGAAACCGCGAGGTATGTGAGCCTCTaGTCCTGTGTGGCCACAAAG +
Preference number: 4 (lower is better)
Translates to: DLESGPTARAAVWTLETARYVSL*SCVATK
Trigger: CTTTGTGGCCACACAGGAGCAGAGGCTCACATACCT...CGCGGTTTCCAGTGTCCACACTGCTGCCCGTGCAGTGGGACCAGATTCCAGGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR GCA 90 bp GACAGACGTGGAGGTGGCGCCACAAGAAGTCTGAGCATGCAGGTGCTTTATACAACCCGCTGGCTGCTGTaGCGCCGTCATAGGCACTGG +
Preference number: 4 (lower is better)
Translates to: DRRGGGATRSLSMQVLYTTRWLL*RRHRHW
Trigger: CCAGTGCCTATGACGGCGGCACAGCAGCCAGCGGGT...TGTATAAAGCACCTGCATGCTCAGACTTCTTGTGGCGCCACCTCCACGTCTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR GCA 90 bp GAGCTTGCTGTTCCTTGTCCTGGGTCTTGGGCCTCAAGGTCTGTTTGGAGGGAGTCCATCGGGACCCCGTaGAGTTCCGCAACTGGCTTC +
Preference number: 4 (lower is better)
Translates to: ELAVPCPGSWASRSVWRESIGTP*SSATGF
Trigger: GAAGCCAGTTGCGGAACTGCACGGGGTCCCGATGGA...CTCCCTCCAAACAGACCTTGAGGCCCAAGACCCAGGACAAGGAACAGCAAGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359872.6
CDS-3UTR CCA 90 bp CAGCAGTGTGGACACTGGAAACCGCGTGGAGGAGTGTCATGTACAAGACAGACGCGGGAGAACCCTCTTTaGGCCCCAGGCGAACTTGGG +
Preference number: 4 (lower is better)
Translates to: QQCGHWKPRGGVSCTRQTRENPL*APGELG
Trigger: CCCAAGTTCGCCTGGGGCCCAAAGAGGGTTCTCCCG...CGTCTGTCTTGTACATGACACTCCTCCACGCGGTTTCCAGTGTCCACACTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225823.7
CDS-3UTR CCA 90 bp CTTGATTGTGCAGTTCTGATTCCAGGGTGGCCTCATGGTGACTTTGGACCTGGACTGGAGGGGTCCCACTaGGAGCCGCCTCTCCAGTCC +
Preference number: 4 (lower is better)
Translates to: LDCAVLIPGWPHGDFGPGLEGSH*EPPLQS
Trigger: GGACTGGAGAGGCGGCTCCCAGTGGGACCCCTCCAG...TCCAGGTCCAAAGTCACCATGAGGCCACCCTGGAATCAGAACTGCACAATCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225823.7
CDS-3UTR CCA 90 bp ACAAGACAGACGTGGAGGTGGCGCCACAAGAAGTCTGAGCATGCAGGTGCTTTAGCCCGGCACTACTTCTaGAGGGGTCCCACTGGGAGC +
Preference number: 4 (lower is better)
Translates to: TRQTWRWRHKKSEHAGALARHYF*RGPTGS
Trigger: GCTCCCAGTGGGACCCCTCCAGAAGTAGTGCCGGGC...TAAAGCACCTGCATGCTCAGACTTCTTGTGGCGCCACCTCCACGTCTGTCTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225823.7
CDS-3UTR CCA 90 bp CTTGATTGTGCAGTTCTGATTCCAGGGTGGCCTCATGGTGACTTTGGACCTGGAGCGGGGAAGGGTAACTaGCGGCTCCACTCGCGGTGC +
Preference number: 4 (lower is better)
Translates to: LDCAVLIPGWPHGDFGPGAGKGN*RLHSRC
Trigger: GCACCGCGAGTGGAGCCGCCAGTTACCCTTCCCCGC...TCCAGGTCCAAAGTCACCATGAGGCCACCCTGGAATCAGAACTGCACAATCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225823.7
CDS-3UTR CCA 90 bp GTGGACACTGGAAACCGCGTGGAGGAGTGTCATGTACAAGACAGACGTGGAGGTAGTAGAGGTCCCCCTTaGAGAGGCGCGGGAAGCGCA +
Preference number: 4 (lower is better)
Translates to: VDTGNRVEECHVQDRRGGSRGPP*RGAGSA
Trigger: TGCGCTTCCCGCGCCTCTCCAAGGGGGACCTCTACT...ACCTCCACGTCTGTCTTGTACATGACACTCCTCCACGCGGTTTCCAGTGTCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000225823.7
CDS-3UTR CCA 90 bp TGTTCCTTGTCCTGGGTCTTGGGCCTCAAGGTCTGTTTGGAGGGAGTGCTGGGTATGTCCTCCAGCTGGTaGCCCAGGCGGTCCATGAAG +
Preference number: 4 (lower is better)
Translates to: CSLSWVLGLKVCLEGVLGMSSSW*PRRSMK
Trigger: CTTCATGGACCGCCTGGGCCACCAGCTGGAGGACAT...ACCCAGCACTCCCTCCAAACAGACCTTGAGGCCCAAGACCCAGGACAAGGAACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225823.7
CDS-3UTR CCA 90 bp AGCTTGCTGTTCCTTGTCCTGGGTCTTGGGCCTCAAGGTCTGTTTGGAGGGAGTGCACTCACCCCACGGTaGGGGCAGGTATGTGAGCCT +
Preference number: 4 (lower is better)
Translates to: SLLFLVLGLGPQGLFGGSALTPR*GQVCEP
Trigger: AGGCTCACATACCTGCCCCCACCGTGGGGTGAGTGC...ACTCCCTCCAAACAGACCTTGAGGCCCAAGACCCAGGACAAGGAACAGCAAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR CCA 90 bp TGGACCTGGAATCTGGTCCCACTGCACGGGCAGCAGTGTGGACACTGGAAACCGGCCTCAAGGTCTGTTTaGAGGGAGTGCTGGGTGACT +
Preference number: 4 (lower is better)
Translates to: WTWNLVPLHGQQCGHWKPASRSV*RECWVT
Trigger: AGTCACCCAGCACTCCCTCCAAACAGACCTTGAGGC...CGGTTTCCAGTGTCCACACTGCTGCCCGTGCAGTGGGACCAGATTCCAGGTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR CCA 90 bp ACAAGACAGACGTGGAGGTGGCGCCACAAGAAGTCTGAGCATGCAGGTGCTTTAGCGTCGTGTTGGACGTaGCCGGAGCGAGGTCTAGGC +
Preference number: 4 (lower is better)
Translates to: TRQTWRWRHKKSEHAGALASCWT*PERGLG
Trigger: GCCTAGACCTCGCTCCGGCCACGTCCAACACGACGC...TAAAGCACCTGCATGCTCAGACTTCTTGTGGCGCCACCTCCACGTCTGTCTTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR CCA 90 bp CAGCAGTGTGGACACTGGAAACCGCGTGGAGGAGTGTCATGTACAAGACAGACGGCACGGGCAGCAGTGTaGACACTGGAAACCGCGTGG +
Preference number: 4 (lower is better)
Translates to: QQCGHWKPRGGVSCTRQTARAAV*TLETAW
Trigger: CCACGCGGTTTCCAGTGTCCACACTGCTGCCCGTGC...CGTCTGTCTTGTACATGACACTCCTCCACGCGGTTTCCAGTGTCCACACTGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR TCA 90 bp TGGACCTGGAATCTGGTCCCACTGCACGGGCAGCAGTGTGGACACTGGAAACCGGGCACGTTCACAGTGTaGCTGATGGTTTCAGAGTGG +
Preference number: 4 (lower is better)
Translates to: WTWNLVPLHGQQCGHWKPGTFTV*LMVSEW
Trigger: CCACTCTGAAACCATCAGTCACACTGTGAACGTGCC...CGGTTTCCAGTGTCCACACTGCTGCCCGTGCAGTGGGACCAGATTCCAGGTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR TCA 90 bp CAGCAGTGTGGACACTGGAAACCGCGTGGAGGAGTGTCATGTACAAGACAGACGTGGGGCCATCCCACCTaGGCTTGCTGTTCCTTGTCC +
Preference number: 4 (lower is better)
Translates to: QQCGHWKPRGGVSCTRQTWGHPT*ACCSLS
Trigger: GGACAAGGAACAGCAAGCTCAGGTGGGATGGCCCCA...CGTCTGTCTTGTACATGACACTCCTCCACGCGGTTTCCAGTGTCCACACTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR TCA 90 bp TGGACCTGGAATCTGGTCCCACTGCACGGGCAGCAGTGTGGACACTGGAAACCGTCTGGCAGTGAGATGTaGTGGCAGGTTCGTTCTTGG +
Preference number: 4 (lower is better)
Translates to: WTWNLVPLHGQQCGHWKPSGSEM*WQVRSW
Trigger: CCAAGAACGAACCTGCCATCACATCTCACTGCCAGA...CGGTTTCCAGTGTCCACACTGCTGCCCGTGCAGTGGGACCAGATTCCAGGTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR TCA 90 bp CAGCAGTGTGGACACTGGAAACCGCGTGGAGGAGTGTCATGTACAAGACAGACGGGGAAGACCAGGCTTTaGGCCACCACTTCGTCCACC +
Preference number: 4 (lower is better)
Translates to: QQCGHWKPRGGVSCTRQTGKTRL*ATTSST
Trigger: GGTGGACGAAGTGGTGGCTCAAAGCCTGGTCTTCCC...CGTCTGTCTTGTACATGACACTCCTCCACGCGGTTTCCAGTGTCCACACTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359872.6
CDS-3UTR GCA 90 bp CAGCAGTGTGGACACTGGAAACCGCGTGGAGGAGTGTCATGTACAAGACAGACGAGCTCCTTCCCCGGTTaGCCGGGAGAACCCTCTTTG +
Preference number: 4 (lower is better)
Translates to: QQCGHWKPRGGVSCTRQTSSFPG*PGEPSL
Trigger: CAAAGAGGGTTCTCCCGGGCAACCGGGGAAGGAGCT...CGTCTGTCTTGTACATGACACTCCTCCACGCGGTTTCCAGTGTCCACACTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225823.7
CDS-3UTR GCA 90 bp CTGGCAGTGAGATGTGATGGCAGGTTCGTTCTTGGACAGTTCCAGAGTGTGACTCTCGCGTCTTCTCTCTaGCCCCGCGGCGACAAGAGC +
Preference number: 4 (lower is better)
Translates to: LAVRCDGRFVLGQFQSVTLASSL*PRGDKS
Trigger: GCTCTTGTCGCCGCGGGGGCAGAGAGAAGACGCGAG...AGTCACACTCTGGAACTGTCCAAGAACGAACCTGCCATCACATCTCACTGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225823.7
CDS-3UTR GCA 90 bp CAGCAGTGTGGACACTGGAAACCGCGTGGAGGAGTGTCATGTACAAGACAGACGCTCGGCTCTCCCAGGTaGCTCGCGTCTCCAGAAAAG +
Preference number: 4 (lower is better)
Translates to: QQCGHWKPRGGVSCTRQTLGSPR*LASPEK
Trigger: CTTTTCTGGAGACGCGAGGCACCTGGGAGAGCCGAG...CGTCTGTCTTGTACATGACACTCCTCCACGCGGTTTCCAGTGTCCACACTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225823.7
CDS-3UTR GCA 90 bp TGTACAAGACAGACGTGGAGGTGGCGCCACAAGAAGTCTGAGCATGCAGGTGCTACCCTTCCTTGTTACTaGTCCCTGGGCTGCGCTCGG +
Preference number: 4 (lower is better)
Translates to: CTRQTWRWRHKKSEHAGATLPCY*SLGCAR
Trigger: CCGAGCGCAGCCCAGGGAGCAGTAACAAGGAAGGGT...AGCACCTGCATGCTCAGACTTCTTGTGGCGCCACCTCCACGTCTGTCTTGTACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225823.7
CDS-3UTR GCA 90 bp CTTGATTGTGCAGTTCTGATTCCAGGGTGGCCTCATGGTGACTTTGGACCTGGAGGTCGCCTTGCCGGCTaGCGCCTTCTTTCCCTTCCC +
Preference number: 4 (lower is better)
Translates to: LDCAVLIPGWPHGDFGPGGRLAG*RLLSLP
Trigger: GGGAAGGGAAAGAAGGCGGCAGCCGGCAAGGCGACC...TCCAGGTCCAAAGTCACCATGAGGCCACCCTGGAATCAGAACTGCACAATCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225823.7
CDS-3UTR GCA 90 bp ACAAGACAGACGTGGAGGTGGCGCCACAAGAAGTCTGAGCATGCAGGTGCTTTAGGTGAGTGGTCGCCTTaGCGGCTGCCGCCTTCTTTC +
Preference number: 4 (lower is better)
Translates to: TRQTWRWRHKKSEHAGALGEWSP*RLPPSF
Trigger: GAAAGAAGGCGGCAGCCGGCAAGGCGACCACTCACC...TAAAGCACCTGCATGCTCAGACTTCTTGTGGCGCCACCTCCACGTCTGTCTTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225823.7
CDS-3UTR GCA 90 bp CAGCAGTGTGGACACTGGAAACCGCGTGGAGGAGTGTCATGTACAAGACAGACGGCCACTCGGCCACCATaGCTGATCTGGACATCCCCA +
Preference number: 4 (lower is better)
Translates to: QQCGHWKPRGGVSCTRQTATRPP*LIWTSP
Trigger: TGGGGATGTCCAGATCAGGCATGGTGGCCGAGTGGC...CGTCTGTCTTGTACATGACACTCCTCCACGCGGTTTCCAGTGTCCACACTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225823.7
CDS-3UTR GCA 90 bp GCAGTGTGGACACTGGAAACCGCGTGGAGGAGTGTCATGTACAAGACAGACGTGGCTCGCCGCGGTACTTaGAGGAGAGCAGCATGTCCT +
Preference number: 4 (lower is better)
Translates to: AVWTLETAWRSVMYKTDVARRGT*RRAACP
Trigger: AGGACATGCTGCTCTCCTGCAAGTACCGCGGCGAGC...CACGTCTGTCTTGTACATGACACTCCTCCACGCGGTTTCCAGTGTCCACACTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225823.7
CDS-3UTR GCA 90 bp TCATCTCTCCTAAGAGGGACGCACGGCGGGGCCCAAGGATGCGTCGTGTTGGACACTTGGCTGATGTCTTaGTGGGGATCTTCACCATGG +
Preference number: 4 (lower is better)
Translates to: SSLLRGTHGGAQGCVVLDTWLMS*WGSSPW
Trigger: CCATGGTGAAGATCCCCAGCAAGACATCAGCCAAGT...GTCCAACACGACGCATCCTTGGGCCCCGCCGTGCGTCCCTCTTAGGAGAGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR GCA 90 bp GACAGACGTGGAGGTGGCGCCACAAGAAGTCTGAGCATGCAGGTGCTTTATACAGTCCCCAGGGTCGTCTaGAGGGGCACGTTCACAGTG +
Preference number: 4 (lower is better)
Translates to: DRRGGGATRSLSMQVLYTVPRVV*RGTFTV
Trigger: CACTGTGAACGTGCCCCTGCAGACGACCCTGGGGAC...TGTATAAAGCACCTGCATGCTCAGACTTCTTGTGGCGCCACCTCCACGTCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR GCA 90 bp CAGCAGTGTGGACACTGGAAACCGCGTGGAGGAGTGTCATGTACAAGACAGACGGGAATCTGGTCCCACTaGACGGGCAGCAGTGTGGAC +
Preference number: 4 (lower is better)
Translates to: QQCGHWKPRGGVSCTRQTGIWSH*TGSSVD
Trigger: GTCCACACTGCTGCCCGTGCAGTGGGACCAGATTCC...CGTCTGTCTTGTACATGACACTCCTCCACGCGGTTTCCAGTGTCCACACTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR GCA 90 bp CAGCAGTGTGGACACTGGAAACCGCGTGGAGGAGTGTCATGTACAAGACAGACGTTGAAGTTGGCCTTCTaGCGCAGGGCCTCCAGCACG +
Preference number: 4 (lower is better)
Translates to: QQCGHWKPRGGVSCTRQTLKLAF*RRASST
Trigger: CGTGCTGGAGGCCCTGCGGCAGAAGGCCAACTTCAA...CGTCTGTCTTGTACATGACACTCCTCCACGCGGTTTCCAGTGTCCACACTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359872.6
CDS-3UTR CCA 90 bp AGCTTGCTGTTCCTTGTCCTGGGTCTTGGGCCTCAAGGTCTGTTTGGAGGGAGTCCCCAGCTTTTACGCTaGTCCTGGGAGAAGGGCCAC +
Preference number: 4 (lower is better)
Translates to: SLLFLVLGLGPQGLFGGSPQLLR*SWEKGH
Trigger: GTGGCCCTTCTCCCAGGACCAGCGTAAAAGCTGGGG...ACTCCCTCCAAACAGACCTTGAGGCCCAAGACCCAGGACAAGGAACAGCAAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000225823.7
CDS-3UTR CCA 90 bp TGGGTCTTGGGCCTCAAGGTCTGTTTGGAGGGAGTGCTGGGTGACTCGAGGGGTTGTACAAGACAGACGTaGAGGTGGCGCCACAAGAAG +
Preference number: 4 (lower is better)
Translates to: WVLGLKVCLEGVLGDSRGCTRQT*RWRHKK
Trigger: CTTCTTGTGGCGCCACCTCCACGTCTGTCTTGTACA...ACCCCTCGAGTCACCCAGCACTCCCTCCAAACAGACCTTGAGGCCCAAGACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR CCA 90 bp GACAGACGTGGAGGTGGCGCCACAAGAAGTCTGAGCATGCAGGTGCTTTATACAGCACGGGCAGCAGTGTaGACACTGGAAACCGCGTGG +
Preference number: 4 (lower is better)
Translates to: DRRGGGATRSLSMQVLYTARAAV*TLETAW
Trigger: CCACGCGGTTTCCAGTGTCCACACTGCTGCCCGTGC...TGTATAAAGCACCTGCATGCTCAGACTTCTTGTGGCGCCACCTCCACGTCTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR CCA 90 bp TGGGTCTTGGGCCTCAAGGTCTGTTTGGAGGGAGTGCTGGGTGACTCGAGGGGTCCAGGCCCCCTTTTGTaGGCAGAATTCCAAATGCCA +
Preference number: 4 (lower is better)
Translates to: WVLGLKVCLEGVLGDSRGPGPLL*AEFQMP
Trigger: TGGCATTTGGAATTCTGCCCACAAAAGGGGGCCTGG...ACCCCTCGAGTCACCCAGCACTCCCTCCAAACAGACCTTGAGGCCCAAGACCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359872.6
CDS-3UTR TCA 90 bp CTGGCAGTGAGATGTGATGGCAGGTTCGTTCTTGGACAGTTCCAGAGTGTGACTCTCGGCCACCATGCCTaGTCTGGACATCCCCAGGGA +
Preference number: 4 (lower is better)
Translates to: LAVRCDGRFVLGQFQSVTLGHHA*SGHPQG
Trigger: TCCCTGGGGATGTCCAGATCAGGCATGGTGGCCGAG...AGTCACACTCTGGAACTGTCCAAGAACGAACCTGCCATCACATCTCACTGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225823.7
CDS-3UTR TCA 90 bp CAGCAGTGTGGACACTGGAAACCGCGTGGAGGAGTGTCATGTACAAGACAGACGTGTGTGACGGGAAGCTaGGCCAGTAGAGCAAGCGGT +
Preference number: 4 (lower is better)
Translates to: QQCGHWKPRGGVSCTRQTCVTGS*ASRASG
Trigger: ACCGCTTGCTCTACTGGCTCAGCTTCCCGTCACACA...CGTCTGTCTTGTACATGACACTCCTCCACGCGGTTTCCAGTGTCCACACTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225823.7
CDS-3UTR TCA 90 bp GAGCTTGCTGTTCCTTGTCCTGGGTCTTGGGCCTCAAGGTCTGTTTGGAGGGAGAGCCCAGCTCTTGGATaGAAGGTGGCTCAGACTGAC +
Preference number: 4 (lower is better)
Translates to: ELAVPCPGSWASRSVWRESPALG*KVAQTD
Trigger: GTCAGTCTGAGCCACCTTTCATCCAAGAGCTGGGCT...CTCCCTCCAAACAGACCTTGAGGCCCAAGACCCAGGACAAGGAACAGCAAGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR TCA 90 bp GACAGACGTGGAGGTGGCGCCACAAGAAGTCTGAGCATGCAGGTGCTTTATACATGGGGCCATCCCACCTaGGCTTGCTGTTCCTTGTCC +
Preference number: 4 (lower is better)
Translates to: DRRGGGATRSLSMQVLYTWGHPT*ACCSLS
Trigger: GGACAAGGAACAGCAAGCTCAGGTGGGATGGCCCCA...TGTATAAAGCACCTGCATGCTCAGACTTCTTGTGGCGCCACCTCCACGTCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR GCA 90 bp CAAGAACTGAATGTAGCAGAGAGTCCCATGGGTTCCCTCTTGATTGTGCAGTTCGGAAGTCCGCCAGCTTaGGGAACCACTGGCGGCGCG +
Preference number: 4 (lower is better)
Translates to: QELNVAESPMGSLLIVQFGSPPA*GTTGGA
Trigger: CGCGCCGCCAGTGGTTCCGCAAGCTGGCGGACTTCC...GAACTGCACAATCAAGAGGGAACCCATGGGACTCTCTGCTACATTCAGTTCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225823.7
CDS-3UTR GCA 90 bp TGTTCCTTGTCCTGGGTCTTGGGCCTCAAGGTCTGTTTGGAGGGAGTGCTGGGTTGTAGCGGGTTAGGTTaGAGGGTGTCCTGCAGAGAC +
Preference number: 4 (lower is better)
Translates to: CSLSWVLGLKVCLEGVLGCSGLG*RVSCRD
Trigger: GTCTCTGCAGGACACCCTGCAACCTAACCCGCTACA...ACCCAGCACTCCCTCCAAACAGACCTTGAGGCCCAAGACCCAGGACAAGGAACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR GCA 90 bp TGTACAAGACAGACGTGGAGGTGGCGCCACAAGAAGTCTGAGCATGCAGGTGCTTCTGTTTGGAGGGAGTaGTGGGTGACTCGAGGGGTG +
Preference number: 4 (lower is better)
Translates to: CTRQTWRWRHKKSEHAGASVWRE*WVTRGV
Trigger: CACCCCTCGAGTCACCCAGCACTCCCTCCAAACAGA...AGCACCTGCATGCTCAGACTTCTTGTGGCGCCACCTCCACGTCTGTCTTGTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR GCA 90 bp GACAGACGTGGAGGTGGCGCCACAAGAAGTCTGAGCATGCAGGTGCTTTATACAGTTTTGGACTCCGAATaGCGTTTCTCGCCGCCGGCC +
Preference number: 4 (lower is better)
Translates to: DRRGGGATRSLSMQVLYTVLDSE*RFSPPA
Trigger: GGCCGGCGGCGAGAAACGGCATTCGGAGTCCAAAAC...TGTATAAAGCACCTGCATGCTCAGACTTCTTGTGGCGCCACCTCCACGTCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359872.6
CDS-3UTR CCA 90 bp GACAGACGTGGAGGTGGCGCCACAAGAAGTCTGAGCATGCAGGTGCTTTATACACCACCATGCCTGATCTaGACATCCCCAGGGACCCCA +
Preference number: 4 (lower is better)
Translates to: DRRGGGATRSLSMQVLYTPPCLI*TSPGTP
Trigger: TGGGGTCCCTGGGGATGTCCAGATCAGGCATGGTGG...TGTATAAAGCACCTGCATGCTCAGACTTCTTGTGGCGCCACCTCCACGTCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000225823.7
CDS-3UTR CCA 90 bp GACCTGGAATCTGGTCCCACTGCACGGGCAGCAGTGTGGACACTGGAAACCGCGCTCTTGGATGAAAGGTaGCTCAGACTGACTGTGGAT +
Preference number: 4 (lower is better)
Translates to: DLESGPTARAAVWTLETALLDER*LRLTVD
Trigger: ATCCACAGTCAGTCTGAGCCACCTTTCATCCAAGAG...CGCGGTTTCCAGTGTCCACACTGCTGCCCGTGCAGTGGGACCAGATTCCAGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR CCA 90 bp GACCTGGAATCTGGTCCCACTGCACGGGCAGCAGTGTGGACACTGGAAACCGCGTCTTCTCAAGGTACTTaGCTGATGTCTTGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: DLESGPTARAAVWTLETASSQGT*LMSCWG
Trigger: TCCCCAGCAAGACATCAGCCAAGTACCTTGAGAAGA...CGCGGTTTCCAGTGTCCACACTGCTGCCCGTGCAGTGGGACCAGATTCCAGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR CCA 90 bp TGTTCCTTGTCCTGGGTCTTGGGCCTCAAGGTCTGTTTGGAGGGAGTGCTGGGTGCCTCAAGGTCTGTTTaGAGGGAGTGCTGGGTGACT +
Preference number: 4 (lower is better)
Translates to: CSLSWVLGLKVCLEGVLGASRSV*RECWVT
Trigger: AGTCACCCAGCACTCCCTCCAAACAGACCTTGAGGC...ACCCAGCACTCCCTCCAAACAGACCTTGAGGCCCAAGACCCAGGACAAGGAACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR CCA 90 bp GTGGACACTGGAAACCGCGTGGAGGAGTGTCATGTACAAGACAGACGTGGAGGTTTTGGACCTGGAATCTaGTCCCACTGCACGGGCAGC +
Preference number: 4 (lower is better)
Translates to: VDTGNRVEECHVQDRRGGFGPGI*SHCTGS
Trigger: GCTGCCCGTGCAGTGGGACCAGATTCCAGGTCCAAA...ACCTCCACGTCTGTCTTGTACATGACACTCCTCCACGCGGTTTCCAGTGTCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR CCA 90 bp GTGGACACTGGAAACCGCGTGGAGGAGTGTCATGTACAAGACAGACGTGGAGGTGTGGTGAAGTCTTGGTaGCCGCACTCCTGCCCTTTG +
Preference number: 4 (lower is better)
Translates to: VDTGNRVEECHVQDRRGGVVKSW*PHSCPL
Trigger: CAAAGGGCAGGAGTGCGGCCACCAAGACTTCACCAC...ACCTCCACGTCTGTCTTGTACATGACACTCCTCCACGCGGTTTCCAGTGTCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359872.6
CDS-3UTR TCA 90 bp CTGGCAGTGAGATGTGATGGCAGGTTCGTTCTTGGACAGTTCCAGAGTGTGACTGCTGTGAGTTTATCCTaGGAGCCCAGCCGCACGCTG +
Preference number: 4 (lower is better)
Translates to: LAVRCDGRFVLGQFQSVTAVSLS*EPSRTL
Trigger: CAGCGTGCGGCTGGGCTCTCAGGATAAACTCACAGC...AGTCACACTCTGGAACTGTCCAAGAACGAACCTGCCATCACATCTCACTGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359872.6
CDS-3UTR TCA 90 bp AGCTTGCTGTTCCTTGTCCTGGGTCTTGGGCCTCAAGGTCTGTTTGGAGGGAGTTCGCGCCAGATGCTGTaGGTTTATCCTGAGAGCCCA +
Preference number: 4 (lower is better)
Translates to: SLLFLVLGLGPQGLFGGSSRQML*VYPESP
Trigger: TGGGCTCTCAGGATAAACTCACAGCATCTGGCGCGA...ACTCCCTCCAAACAGACCTTGAGGCCCAAGACCCAGGACAAGGAACAGCAAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359872.6
CDS-3UTR TCA 90 bp GAGCTTGCTGTTCCTTGTCCTGGGTCTTGGGCCTCAAGGTCTGTTTGGAGGGAGGCTCTGCTTAAACCTTaGCGTTCAGGGGAGAGAACG +
Preference number: 4 (lower is better)
Translates to: ELAVPCPGSWASRSVWREALLKP*RSGERT
Trigger: CGTTCTCTCCCCTGAACGTCAAGGTTTAAGCAGAGC...CTCCCTCCAAACAGACCTTGAGGCCCAAGACCCAGGACAAGGAACAGCAAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359872.6
CDS-3UTR GCA 90 bp CAAGAACTGAATGTAGCAGAGAGTCCCATGGGTTCCCTCTTGATTGTGCAGTTCGGTCTTCCTGGAGGATaGCCGGCGCCCGGCACTACT +
Preference number: 4 (lower is better)
Translates to: QELNVAESPMGSLLIVQFGLPGG*PAPGTT
Trigger: AGTAGTGCCGGGCGCCGGGCATCCTCCAGGAAGACC...GAACTGCACAATCAAGAGGGAACCCATGGGACTCTCTGCTACATTCAGTTCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225823.7
CDS-3UTR GCA 90 bp TGTTCCTTGTCCTGGGTCTTGGGCCTCAAGGTCTGTTTGGAGGGAGTGCTGGGTGCACACTCCTTGTGCTaGTCAGGGGTACAAAAAGGG +
Preference number: 4 (lower is better)
Translates to: CSLSWVLGLKVCLEGVLGAHSLC*SGVQKG
Trigger: CCCTTTTTGTACCCCTGAGCAGCACAAGGAGTGTGC...ACCCAGCACTCCCTCCAAACAGACCTTGAGGCCCAAGACCCAGGACAAGGAACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR GCA 90 bp GACCTGGAATCTGGTCCCACTGCACGGGCAGCAGTGTGGACACTGGAAACCGCGTGCAGAGACAGTAATTaGTGTCCTTTTCCGCCAACA +
Preference number: 4 (lower is better)
Translates to: DLESGPTARAAVWTLETACRDSN*CPFPPT
Trigger: TGTTGGCGGAAAAGGACAGCAATTACTGTCTCTGCA...CGCGGTTTCCAGTGTCCACACTGCTGCCCGTGCAGTGGGACCAGATTCCAGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR GCA 90 bp ACAAGACAGACGTGGAGGTGGCGCCACAAGAAGTCTGAGCATGCAGGTGCTTTATCTGTTTGGAGGGAGTaGTGGGTGACTCGAGGGGTG +
Preference number: 4 (lower is better)
Translates to: TRQTWRWRHKKSEHAGALSVWRE*WVTRGV
Trigger: CACCCCTCGAGTCACCCAGCACTCCCTCCAAACAGA...TAAAGCACCTGCATGCTCAGACTTCTTGTGGCGCCACCTCCACGTCTGTCTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR GCA 90 bp TGTACAAGACAGACGTGGAGGTGGCGCCACAAGAAGTCTGAGCATGCAGGTGCTTGCATAGGGGGCTCTTaGTTCTTTCCAGCACTGGGG +
Preference number: 4 (lower is better)
Translates to: CTRQTWRWRHKKSEHAGACIGGS*FFPALG
Trigger: CCCCAGTGCTGGAAAGAAGCAAGAGCCCCCTATGCA...AGCACCTGCATGCTCAGACTTCTTGTGGCGCCACCTCCACGTCTGTCTTGTACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR GCA 90 bp GACAGACGTGGAGGTGGCGCCACAAGAAGTCTGAGCATGCAGGTGCTTTATACATGGATGCTAGAAGGTTaGAGGCTGCCCTCACTGGGG +
Preference number: 4 (lower is better)
Translates to: DRRGGGATRSLSMQVLYTWMLEG*RLPSLG
Trigger: CCCCAGTGAGGGCAGCCTGCAACCTTCTAGCATCCA...TGTATAAAGCACCTGCATGCTCAGACTTCTTGTGGCGCCACCTCCACGTCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359872.6
CDS-3UTR GCA 90 bp CTGGCAGTGAGATGTGATGGCAGGTTCGTTCTTGGACAGTTCCAGAGTGTGACTTGGGGGTCCGGGATCTaGAGGTTGACATCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: LAVRCDGRFVLGQFQSVTWGSGI*RLTSSR
Trigger: CCTGCTGGATGTCAACCTGCAGATCCCGGACCCCCA...AGTCACACTCTGGAACTGTCCAAGAACGAACCTGCCATCACATCTCACTGCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359872.6
CDS-3UTR CCA 90 bp AGACAGACGTGGAGGTGGCGCCACAAGAAGTCTGAGCATGCAGGTGCTTTATACGTTTGGAGGGAGTGCTaGGTGACTCGAGGGGTGTCA +
Preference number: 4 (lower is better)
Translates to: RQTWRWRHKKSEHAGALYVWREC*VTRGVS
Trigger: TGACACCCCTCGAGTCACCCAGCACTCCCTCCAAAC...GTATAAAGCACCTGCATGCTCAGACTTCTTGTGGCGCCACCTCCACGTCTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR CCA 90 bp AGCTTGCTGTTCCTTGTCCTGGGTCTTGGGCCTCAAGGTCTGTTTGGAGGGAGTCCTTGTCCTGGGTCTTaGGCCTCAAGGTCTGTTTGG +
Preference number: 4 (lower is better)
Translates to: SLLFLVLGLGPQGLFGGSPCPGS*ASRSVW
Trigger: CCAAACAGACCTTGAGGCCCAAGACCCAGGACAAGG...ACTCCCTCCAAACAGACCTTGAGGCCCAAGACCCAGGACAAGGAACAGCAAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR CCA 90 bp GCAGTGTGGACACTGGAAACCGCGTGGAGGAGTGTCATGTACAAGACAGACGTGTGCTGTTCCTTGTCCTaGGTCTTGGGCCTCAAGGTC +
Preference number: 4 (lower is better)
Translates to: AVWTLETAWRSVMYKTDVCCSLS*VLGLKV
Trigger: GACCTTGAGGCCCAAGACCCAGGACAAGGAACAGCA...CACGTCTGTCTTGTACATGACACTCCTCCACGCGGTTTCCAGTGTCCACACTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR CCA 90 bp AGCTTGCTGTTCCTTGTCCTGGGTCTTGGGCCTCAAGGTCTGTTTGGAGGGAGTTGCTGTTCCTTGTCCTaGGTCTTGGGCCTCAAGGTC +
Preference number: 4 (lower is better)
Translates to: SLLFLVLGLGPQGLFGGSCCSLS*VLGLKV
Trigger: GACCTTGAGGCCCAAGACCCAGGACAAGGAACAGCA...ACTCCCTCCAAACAGACCTTGAGGCCCAAGACCCAGGACAAGGAACAGCAAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR CCA 90 bp CAAGAACTGAATGTAGCAGAGAGTCCCATGGGTTCCCTCTTGATTGTGCAGTTCGCGTCGTGTTGGACGTaGCCGGAGCGAGGTCTAGGC +
Preference number: 4 (lower is better)
Translates to: QELNVAESPMGSLLIVQFASCWT*PERGLG
Trigger: GCCTAGACCTCGCTCCGGCCACGTCCAACACGACGC...GAACTGCACAATCAAGAGGGAACCCATGGGACTCTCTGCTACATTCAGTTCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR CCA 90 bp CTGGCAGTGAGATGTGATGGCAGGTTCGTTCTTGGACAGTTCCAGAGTGTGACTAAGGATGCGTCGTGTTaGACGTGGCCGGAGCGAGGT +
Preference number: 4 (lower is better)
Translates to: LAVRCDGRFVLGQFQSVTKDASC*TWPERG
Trigger: ACCTCGCTCCGGCCACGTCCAACACGACGCATCCTT...AGTCACACTCTGGAACTGTCCAAGAACGAACCTGCCATCACATCTCACTGCCAG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR CCA 90 bp TGGGTCTTGGGCCTCAAGGTCTGTTTGGAGGGAGTGCTGGGTGACTCGAGGGGTGGCGATAAGGAGGGCTaGTTTTATTTAGGGAGACAC +
Preference number: 4 (lower is better)
Translates to: WVLGLKVCLEGVLGDSRGGDKEG*FYLGRH
Trigger: GTGTCTCCCTAAATAAAACCAGCCCTCCTTATCGCC...ACCCCTCGAGTCACCCAGCACTCCCTCCAAACAGACCTTGAGGCCCAAGACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359872.6
CDS-3UTR CCA 90 bp GTGGACACTGGAAACCGCGTGGAGGAGTGTCATGTACAAGACAGACGTGGAGGTACAGAGGGTCACAGCTaGGAAGACCAGGCTTTGAGC +
Preference number: 4 (lower is better)
Translates to: VDTGNRVEECHVQDRRGGTEGHS*EDQALS
Trigger: GCTCAAAGCCTGGTCTTCCCAGCTGTGACCCTCTGT...ACCTCCACGTCTGTCTTGTACATGACACTCCTCCACGCGGTTTCCAGTGTCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359872.6
CDS-3UTR TCA 90 bp ACAAGACAGACGTGGAGGTGGCGCCACAAGAAGTCTGAGCATGCAGGTGCTTTAAGCCCAGCTCTTGGATaGAAGGTGGCTCAGACTGAC +
Preference number: 4 (lower is better)
Translates to: TRQTWRWRHKKSEHAGALSPALG*KVAQTD
Trigger: GTCAGTCTGAGCCACCTTTCATCCAAGAGCTGGGCT...TAAAGCACCTGCATGCTCAGACTTCTTGTGGCGCCACCTCCACGTCTGTCTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR TCA 90 bp CAAGAACTGAATGTAGCAGAGAGTCCCATGGGTTCCCTCTTGATTGTGCAGTTCGTCGAGGCCCATCTCTaGGGATCGGCACTCACCCCA +
Preference number: 4 (lower is better)
Translates to: QELNVAESPMGSLLIVQFVEAHL*GSALTP
Trigger: TGGGGTGAGTGCCGATCCTCAGAGATGGGCCTCGAC...GAACTGCACAATCAAGAGGGAACCCATGGGACTCTCTGCTACATTCAGTTCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR TCA 90 bp GTGGACACTGGAAACCGCGTGGAGGAGTGTCATGTACAAGACAGACGTGGAGGTGGCACGTTCACAGTGTaGCTGATGGTTTCAGAGTGG +
Preference number: 4 (lower is better)
Translates to: VDTGNRVEECHVQDRRGGGTFTV*LMVSEW
Trigger: CCACTCTGAAACCATCAGTCACACTGTGAACGTGCC...ACCTCCACGTCTGTCTTGTACATGACACTCCTCCACGCGGTTTCCAGTGTCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR TCA 90 bp TGTTCCTTGTCCTGGGTCTTGGGCCTCAAGGTCTGTTTGGAGGGAGTGCTGGGTGACAGTTCCAGAGTGTaGCTCATCTCTCCTAAGAGG +
Preference number: 4 (lower is better)
Translates to: CSLSWVLGLKVCLEGVLGDSSRV*LISPKR
Trigger: CCTCTTAGGAGAGATGAGTCACACTCTGGAACTGTC...ACCCAGCACTCCCTCCAAACAGACCTTGAGGCCCAAGACCCAGGACAAGGAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR TCA 90 bp ACAAGACAGACGTGGAGGTGGCGCCACAAGAAGTCTGAGCATGCAGGTGCTTTAAGGGTGGCCTCATGGTaGCTTTGGACCTGGAATCTG +
Preference number: 4 (lower is better)
Translates to: TRQTWRWRHKKSEHAGALRVASW*LWTWNL
Trigger: CAGATTCCAGGTCCAAAGTCACCATGAGGCCACCCT...TAAAGCACCTGCATGCTCAGACTTCTTGTGGCGCCACCTCCACGTCTGTCTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR TCA 90 bp CAAGAACTGAATGTAGCAGAGAGTCCCATGGGTTCCCTCTTGATTGTGCAGTTCCCGGGATCTGCAGGTTaGCATCCAGCAGGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: QELNVAESPMGSLLIVQFPGSAG*HPAGPA
Trigger: TGCTGGCCCTGCTGGATGTCAACCTGCAGATCCCGG...GAACTGCACAATCAAGAGGGAACCCATGGGACTCTCTGCTACATTCAGTTCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359872.6
CDS-3UTR GCA 90 bp AGCTTGCTGTTCCTTGTCCTGGGTCTTGGGCCTCAAGGTCTGTTTGGAGGGAGTAGGTATGTGAGCCTCTaGTCCTGTGTGGCCACAAAG +
Preference number: 4 (lower is better)
Translates to: SLLFLVLGLGPQGLFGGSRYVSL*SCVATK
Trigger: CTTTGTGGCCACACAGGAGCAGAGGCTCACATACCT...ACTCCCTCCAAACAGACCTTGAGGCCCAAGACCCAGGACAAGGAACAGCAAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR GCA 90 bp TGTTCCTTGTCCTGGGTCTTGGGCCTCAAGGTCTGTTTGGAGGGAGTGCTGGGTCTAGTCTGCAATGTGTaGATAGGGGGCTCTTGCTTC +
Preference number: 4 (lower is better)
Translates to: CSLSWVLGLKVCLEGVLGLVCNV*IGGSCF
Trigger: GAAGCAAGAGCCCCCTATGCACACATTGCAGACTAG...ACCCAGCACTCCCTCCAAACAGACCTTGAGGCCCAAGACCCAGGACAAGGAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR GCA 90 bp CAGCAGTGTGGACACTGGAAACCGCGTGGAGGAGTGTCATGTACAAGACAGACGTCTAGGCAGCTAGTCTaGAATGTGTGCATAGGGGGC +
Preference number: 4 (lower is better)
Translates to: QQCGHWKPRGGVSCTRQTSRQLV*NVCIGG
Trigger: GCCCCCTATGCACACATTGCAGACTAGCTGCCTAGA...CGTCTGTCTTGTACATGACACTCCTCCACGCGGTTTCCAGTGTCCACACTGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR CCA 90 bp TGTACAAGACAGACGTGGAGGTGGCGCCACAAGAAGTCTGAGCATGCAGGTGCTCTCACATTCTCATCGTaGCTCCCTTCGTCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: CTRQTWRWRHKKSEHAGALTFSS*LPSSSS
Trigger: AGAGGAGGACGAAGGGAGCCACGATGAGAATGTGAG...AGCACCTGCATGCTCAGACTTCTTGTGGCGCCACCTCCACGTCTGTCTTGTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR CCA 90 bp GACCTGGAATCTGGTCCCACTGCACGGGCAGCAGTGTGGACACTGGAAACCGCGCTGATGGTTTCAGAGTaGTTTGGCATTGTGTCACAA +
Preference number: 4 (lower is better)
Translates to: DLESGPTARAAVWTLETALMVSE*FGIVSQ
Trigger: TTGTGACACAATGCCAAACCACTCTGAAACCATCAG...CGCGGTTTCCAGTGTCCACACTGCTGCCCGTGCAGTGGGACCAGATTCCAGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR CCA 90 bp CTTGATTGTGCAGTTCTGATTCCAGGGTGGCCTCATGGTGACTTTGGACCTGGAGTTTGGAGGGAGTGCTaGGTGACTCGAGGGGTGTCA +
Preference number: 4 (lower is better)
Translates to: LDCAVLIPGWPHGDFGPGVWREC*VTRGVS
Trigger: TGACACCCCTCGAGTCACCCAGCACTCCCTCCAAAC...TCCAGGTCCAAAGTCACCATGAGGCCACCCTGGAATCAGAACTGCACAATCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR CCA 90 bp GTGGACACTGGAAACCGCGTGGAGGAGTGTCATGTACAAGACAGACGTGGAGGTATATCCTTCAGGTCATaGCCCACACGGTGCAGGAAC +
Preference number: 4 (lower is better)
Translates to: VDTGNRVEECHVQDRRGGISFRS*PTRCRN
Trigger: GTTCCTGCACCGTGTGGGCCATGACCTGAAGGATAT...ACCTCCACGTCTGTCTTGTACATGACACTCCTCCACGCGGTTTCCAGTGTCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359872.6
CDS-3UTR TCA 90 bp TGGACCTGGAATCTGGTCCCACTGCACGGGCAGCAGTGTGGACACTGGAAACCGATGAACAATCCCATCTaGCCACCAATATCACCAAGT +
Preference number: 4 (lower is better)
Translates to: WTWNLVPLHGQQCGHWKPMNNPI*PPISPS
Trigger: ACTTGGTGATATTGGTGGTCAGATGGGATTGTTCAT...CGGTTTCCAGTGTCCACACTGCTGCCCGTGCAGTGGGACCAGATTCCAGGTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR TCA 90 bp GCAGTGTGGACACTGGAAACCGCGTGGAGGAGTGTCATGTACAAGACAGACGTGGACAGTTCCAGAGTGTaGCTCATCTCTCCTAAGAGG +
Preference number: 4 (lower is better)
Translates to: AVWTLETAWRSVMYKTDVDSSRV*LISPKR
Trigger: CCTCTTAGGAGAGATGAGTCACACTCTGGAACTGTC...CACGTCTGTCTTGTACATGACACTCCTCCACGCGGTTTCCAGTGTCCACACTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR TCA 90 bp AGCTTGCTGTTCCTTGTCCTGGGTCTTGGGCCTCAAGGTCTGTTTGGAGGGAGTGCGCCACAAGAAGTCTaGGCATGCAGGTGCTTTATA +
Preference number: 4 (lower is better)
Translates to: SLLFLVLGLGPQGLFGGSAPQEV*ACRCFI
Trigger: TATAAAGCACCTGCATGCTCAGACTTCTTGTGGCGC...ACTCCCTCCAAACAGACCTTGAGGCCCAAGACCCAGGACAAGGAACAGCAAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR TCA 90 bp CTGGCAGTGAGATGTGATGGCAGGTTCGTTCTTGGACAGTTCCAGAGTGTGACTAGGGTGGCCTCATGGTaGCTTTGGACCTGGAATCTG +
Preference number: 4 (lower is better)
Translates to: LAVRCDGRFVLGQFQSVTRVASW*LWTWNL
Trigger: CAGATTCCAGGTCCAAAGTCACCATGAGGCCACCCT...AGTCACACTCTGGAACTGTCCAAGAACGAACCTGCCATCACATCTCACTGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR TCA 90 bp GCAGTGTGGACACTGGAAACCGCGTGGAGGAGTGTCATGTACAAGACAGACGTGCCATGGGTTCCCTCTTaGTTGTGCAGTTCTGATTCC +
Preference number: 4 (lower is better)
Translates to: AVWTLETAWRSVMYKTDVPWVPS*LCSSDS
Trigger: GGAATCAGAACTGCACAATCAAGAGGGAACCCATGG...CACGTCTGTCTTGTACATGACACTCCTCCACGCGGTTTCCAGTGTCCACACTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR TCA 90 bp AGACAGACGTGGAGGTGGCGCCACAAGAAGTCTGAGCATGCAGGTGCTTTATACAGGGAGACACCAAGGTaGTGTGGAAGAGATGTGGGT +
Preference number: 4 (lower is better)
Translates to: RQTWRWRHKKSEHAGALYRETPR*CGRDVG
Trigger: ACCCACATCTCTTCCACATCACCTTGGTGTCTCCCT...GTATAAAGCACCTGCATGCTCAGACTTCTTGTGGCGCCACCTCCACGTCTGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359872.6
CDS-3UTR TCA 90 bp GTGGACACTGGAAACCGCGTGGAGGAGTGTCATGTACAAGACAGACGTGGAGGTGGAACTCCAGCATGCTaGACTGCTTGGGTTTGTAGT +
Preference number: 4 (lower is better)
Translates to: VDTGNRVEECHVQDRRGGGTPAC*TAWVCS
Trigger: ACTACAAACCCAAGCAGTTCAGCATGCTGGAGTTCC...ACCTCCACGTCTGTCTTGTACATGACACTCCTCCACGCGGTTTCCAGTGTCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359872.6
CDS-3UTR GCA 90 bp ACAAGACAGACGTGGAGGTGGCGCCACAAGAAGTCTGAGCATGCAGGTGCTTTAAGAAAAGCCCAGCCTTaGTGTCTCTCGCGTCTTCTC +
Preference number: 4 (lower is better)
Translates to: TRQTWRWRHKKSEHAGALRKAQP*CLSRLL
Trigger: GAGAAGACGCGAGAGACAGCAAGGCTGGGCTTTTCT...TAAAGCACCTGCATGCTCAGACTTCTTGTGGCGCCACCTCCACGTCTGTCTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225823.7
CDS-3UTR GCA 90 bp AGACAGACGTGGAGGTGGCGCCACAAGAAGTCTGAGCATGCAGGTGCTTTATACGCACACTCCTTGTGCTaGTCAGGGGTACAAAAAGGG +
Preference number: 4 (lower is better)
Translates to: RQTWRWRHKKSEHAGALYAHSLC*SGVQKG
Trigger: CCCTTTTTGTACCCCTGAGCAGCACAAGGAGTGTGC...GTATAAAGCACCTGCATGCTCAGACTTCTTGTGGCGCCACCTCCACGTCTGTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR GCA 90 bp GTGGACACTGGAAACCGCGTGGAGGAGTGTCATGTACAAGACAGACGTGGAGGTGGTTGCAGGGTGTCCTaGAGAGACAGTAATTGCTGT +
Preference number: 4 (lower is better)
Translates to: VDTGNRVEECHVQDRRGGGCRVS*RDSNCC
Trigger: ACAGCAATTACTGTCTCTGCAGGACACCCTGCAACC...ACCTCCACGTCTGTCTTGTACATGACACTCCTCCACGCGGTTTCCAGTGTCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR GCA 90 bp CAGCAGTGTGGACACTGGAAACCGCGTGGAGGAGTGTCATGTACAAGACAGACGGGTTGCAGGGTGTCCTaGAGAGACAGTAATTGCTGT +
Preference number: 4 (lower is better)
Translates to: QQCGHWKPRGGVSCTRQTGCRVS*RDSNCC
Trigger: ACAGCAATTACTGTCTCTGCAGGACACCCTGCAACC...CGTCTGTCTTGTACATGACACTCCTCCACGCGGTTTCCAGTGTCCACACTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR GCA 90 bp AGCTTGCTGTTCCTTGTCCTGGGTCTTGGGCCTCAAGGTCTGTTTGGAGGGAGTACTTGGCTGATGTCTTaGTGGGGATCTTCACCATGG +
Preference number: 4 (lower is better)
Translates to: SLLFLVLGLGPQGLFGGSTWLMS*WGSSPW
Trigger: CCATGGTGAAGATCCCCAGCAAGACATCAGCCAAGT...ACTCCCTCCAAACAGACCTTGAGGCCCAAGACCCAGGACAAGGAACAGCAAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR GCA 90 bp GACAGACGTGGAGGTGGCGCCACAAGAAGTCTGAGCATGCAGGTGCTTTATACATCTAGGCAGCTAGTCTaGAATGTGTGCATAGGGGGC +
Preference number: 4 (lower is better)
Translates to: DRRGGGATRSLSMQVLYTSRQLV*NVCIGG
Trigger: GCCCCCTATGCACACATTGCAGACTAGCTGCCTAGA...TGTATAAAGCACCTGCATGCTCAGACTTCTTGTGGCGCCACCTCCACGTCTGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR GCA 90 bp TGGACCTGGAATCTGGTCCCACTGCACGGGCAGCAGTGTGGACACTGGAAACCGGAGCGAGAGAGAAAATaGTTAAAACAAGTCGCTGAG +
Preference number: 4 (lower is better)
Translates to: WTWNLVPLHGQQCGHWKPERERK*LKQVAE
Trigger: CTCAGCGACTTGTTTTAAGCATTTTCTCTCTCGCTC...CGGTTTCCAGTGTCCACACTGCTGCCCGTGCAGTGGGACCAGATTCCAGGTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359872.6
CDS-3UTR GCA 90 bp GACAGACGTGGAGGTGGCGCCACAAGAAGTCTGAGCATGCAGGTGCTTTATACACCAGTCCTCGGGCTCTaGTTAAACCTTGACGTTCAG +
Preference number: 4 (lower is better)
Translates to: DRRGGGATRSLSMQVLYTPVLGL*LNLDVQ
Trigger: CTGAACGTCAAGGTTTAAGCAGAGCCCGAGGACTGG...TGTATAAAGCACCTGCATGCTCAGACTTCTTGTGGCGCCACCTCCACGTCTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359872.6
CDS-3UTR CCA 90 bp AGCTTGCTGTTCCTTGTCCTGGGTCTTGGGCCTCAAGGTCTGTTTGGAGGGAGTTGGCTGATGTCTTGCTaGGGATCTTCACCATGGAGA +
Preference number: 4 (lower is better)
Translates to: SLLFLVLGLGPQGLFGGSWLMSC*GSSPWR
Trigger: TCTCCATGGTGAAGATCCCCAGCAAGACATCAGCCA...ACTCCCTCCAAACAGACCTTGAGGCCCAAGACCCAGGACAAGGAACAGCAAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR CCA 90 bp GCAGTGTGGACACTGGAAACCGCGTGGAGGAGTGTCATGTACAAGACAGACGTGTGGCAGGTTCGTTCTTaGACAGTTCCAGAGTGTGAC +
Preference number: 4 (lower is better)
Translates to: AVWTLETAWRSVMYKTDVWQVRS*TVPECD
Trigger: GTCACACTCTGGAACTGTCCAAGAACGAACCTGCCA...CACGTCTGTCTTGTACATGACACTCCTCCACGCGGTTTCCAGTGTCCACACTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR CCA 90 bp GCAGTGTGGACACTGGAAACCGCGTGGAGGAGTGTCATGTACAAGACAGACGTGACACTGGAAACCGCGTaGAGGAGTGTCATGTACAAG +
Preference number: 4 (lower is better)
Translates to: AVWTLETAWRSVMYKTDVTLETA*RSVMYK
Trigger: CTTGTACATGACACTCCTCCACGCGGTTTCCAGTGT...CACGTCTGTCTTGTACATGACACTCCTCCACGCGGTTTCCAGTGTCCACACTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR CCA 90 bp CAGCAGTGTGGACACTGGAAACCGCGTGGAGGAGTGTCATGTACAAGACAGACGGAGAGAAGAACGACATaGGCACCATGGGTGAACACA +
Preference number: 4 (lower is better)
Translates to: QQCGHWKPRGGVSCTRQTERRTT*APWVNT
Trigger: TGTGTTCACCCATGGTGCCCATGTCGTTCTTCTCTC...CGTCTGTCTTGTACATGACACTCCTCCACGCGGTTTCCAGTGTCCACACTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR CCA 90 bp CTTGATTGTGCAGTTCTGATTCCAGGGTGGCCTCATGGTGACTTTGGACCTGGACCATACACGAAGATGTaGCGGATGCCATGGAGGGTG +
Preference number: 4 (lower is better)
Translates to: LDCAVLIPGWPHGDFGPGPYTKM*RMPWRV
Trigger: CACCCTCCATGGCATCCGCCACATCTTCGTGTATGG...TCCAGGTCCAAAGTCACCATGAGGCCACCCTGGAATCAGAACTGCACAATCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359872.6
CDS-3UTR TCA 90 bp TGTACAAGACAGACGTGGAGGTGGCGCCACAAGAAGTCTGAGCATGCAGGTGCTCGTTCACAGTGTGACTaGTGGTTTCAGAGTGGTTTG +
Preference number: 4 (lower is better)
Translates to: CTRQTWRWRHKKSEHAGARSQCD*WFQSGL
Trigger: CAAACCACTCTGAAACCATCAGTCACACTGTGAACG...AGCACCTGCATGCTCAGACTTCTTGTGGCGCCACCTCCACGTCTGTCTTGTACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR TCA 90 bp AGCTTGCTGTTCCTTGTCCTGGGTCTTGGGCCTCAAGGTCTGTTTGGAGGGAGTCGTTCACAGTGTGACTaGTGGTTTCAGAGTGGTTTG +
Preference number: 4 (lower is better)
Translates to: SLLFLVLGLGPQGLFGGSRSQCD*WFQSGL
Trigger: CAAACCACTCTGAAACCATCAGTCACACTGTGAACG...ACTCCCTCCAAACAGACCTTGAGGCCCAAGACCCAGGACAAGGAACAGCAAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR TCA 90 bp GACAGACGTGGAGGTGGCGCCACAAGAAGTCTGAGCATGCAGGTGCTTTATACACCATGGGTTCCCTCTTaGTTGTGCAGTTCTGATTCC +
Preference number: 4 (lower is better)
Translates to: DRRGGGATRSLSMQVLYTPWVPS*LCSSDS
Trigger: GGAATCAGAACTGCACAATCAAGAGGGAACCCATGG...TGTATAAAGCACCTGCATGCTCAGACTTCTTGTGGCGCCACCTCCACGTCTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR TCA 90 bp CAAGAACTGAATGTAGCAGAGAGTCCCATGGGTTCCCTCTTGATTGTGCAGTTCACAGGTCATTGGTGGTaGGCCTGGAGAACCGGAAGC +
Preference number: 4 (lower is better)
Translates to: QELNVAESPMGSLLIVQFTGHWW*AWRTGS
Trigger: GCTTCCGGTTCTCCAGGCTCACCACCAATGACCTGT...GAACTGCACAATCAAGAGGGAACCCATGGGACTCTCTGCTACATTCAGTTCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359872.6
CDS-3UTR TCA 90 bp CTTGATTGTGCAGTTCTGATTCCAGGGTGGCCTCATGGTGACTTTGGACCTGGACGCACTCCTGCCCTTTaGACTTGCAGTAGAGCATCA +
Preference number: 4 (lower is better)
Translates to: LDCAVLIPGWPHGDFGPGRTPAL*TCSRAS
Trigger: TGATGCTCTACTGCAAGTTCAAAGGGCAGGAGTGCG...TCCAGGTCCAAAGTCACCATGAGGCCACCCTGGAATCAGAACTGCACAATCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359872.6
CDS-3UTR GCA 90 bp TGTTCCTTGTCCTGGGTCTTGGGCCTCAAGGTCTGTTTGGAGGGAGTGCTGGGTTGCAGAGACAGTAATTaGTGTCCTTTTCCGCCAACA +
Preference number: 4 (lower is better)
Translates to: CSLSWVLGLKVCLEGVLGCRDSN*CPFPPT
Trigger: TGTTGGCGGAAAAGGACAGCAATTACTGTCTCTGCA...ACCCAGCACTCCCTCCAAACAGACCTTGAGGCCCAAGACCCAGGACAAGGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR GCA 90 bp TGTACAAGACAGACGTGGAGGTGGCGCCACAAGAAGTCTGAGCATGCAGGTGCTCTTCGTCCTCCTCTTTaGCAAGCAGGTCTAATAGCT +
Preference number: 4 (lower is better)
Translates to: CTRQTWRWRHKKSEHAGALRPPL*QAGLIA
Trigger: AGCTATTAGACCTGCTTGGCAAAGAGGAGGACGAAG...AGCACCTGCATGCTCAGACTTCTTGTGGCGCCACCTCCACGTCTGTCTTGTACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR CCA 90 bp AGACAGACGTGGAGGTGGCGCCACAAGAAGTCTGAGCATGCAGGTGCTTTATACTGGCTGATGTCTTGCTaGGGATCTTCACCATGGAGA +
Preference number: 4 (lower is better)
Translates to: RQTWRWRHKKSEHAGALYWLMSC*GSSPWR
Trigger: TCTCCATGGTGAAGATCCCCAGCAAGACATCAGCCA...GTATAAAGCACCTGCATGCTCAGACTTCTTGTGGCGCCACCTCCACGTCTGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR CCA 90 bp CTTGATTGTGCAGTTCTGATTCCAGGGTGGCCTCATGGTGACTTTGGACCTGGACTCACATTCTCATCGTaGCTCCCTTCGTCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: LDCAVLIPGWPHGDFGPGLTFSS*LPSSSS
Trigger: AGAGGAGGACGAAGGGAGCCACGATGAGAATGTGAG...TCCAGGTCCAAAGTCACCATGAGGCCACCCTGGAATCAGAACTGCACAATCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR CCA 90 bp AGACAGACGTGGAGGTGGCGCCACAAGAAGTCTGAGCATGCAGGTGCTTTATACGAGAGAAGAACGACATaGGCACCATGGGTGAACACA +
Preference number: 4 (lower is better)
Translates to: RQTWRWRHKKSEHAGALYERRTT*APWVNT
Trigger: TGTGTTCACCCATGGTGCCCATGTCGTTCTTCTCTC...GTATAAAGCACCTGCATGCTCAGACTTCTTGTGGCGCCACCTCCACGTCTGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR CCA 90 bp CAAGAACTGAATGTAGCAGAGAGTCCCATGGGTTCCCTCTTGATTGTGCAGTTCATGTGGCGGATGCCATaGAGGGTGGAGGTGTTGGCA +
Preference number: 4 (lower is better)
Translates to: QELNVAESPMGSLLIVQFMWRMP*RVEVLA
Trigger: TGCCAACACCTCCACCCTCCATGGCATCCGCCACAT...GAACTGCACAATCAAGAGGGAACCCATGGGACTCTCTGCTACATTCAGTTCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359872.6
CDS-3UTR CCA 90 bp CAAGAACTGAATGTAGCAGAGAGTCCCATGGGTTCCCTCTTGATTGTGCAGTTCACTGTGGTGAAGTCTTaGTGGCCGCACTCCTGCCCT +
Preference number: 4 (lower is better)
Translates to: QELNVAESPMGSLLIVQFTVVKS*WPHSCP
Trigger: AGGGCAGGAGTGCGGCCACCAAGACTTCACCACAGT...GAACTGCACAATCAAGAGGGAACCCATGGGACTCTCTGCTACATTCAGTTCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359872.6
CDS-3UTR TCA 90 bp GCAGTGTGGACACTGGAAACCGCGTGGAGGAGTGTCATGTACAAGACAGACGTGCAATCCTACAGGCGGTaGTGCTGTAAACAGGAAAAA +
Preference number: 4 (lower is better)
Translates to: AVWTLETAWRSVMYKTDVQSYRR*CCKQEK
Trigger: TTTTTCCTGTTTACAGCATCACCGCCTGTAGGATTG...CACGTCTGTCTTGTACATGACACTCCTCCACGCGGTTTCCAGTGTCCACACTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR TCA 90 bp CTTGATTGTGCAGTTCTGATTCCAGGGTGGCCTCATGGTGACTTTGGACCTGGAGCGCCACAAGAAGTCTaGGCATGCAGGTGCTTTATA +
Preference number: 4 (lower is better)
Translates to: LDCAVLIPGWPHGDFGPGAPQEV*ACRCFI
Trigger: TATAAAGCACCTGCATGCTCAGACTTCTTGTGGCGC...TCCAGGTCCAAAGTCACCATGAGGCCACCCTGGAATCAGAACTGCACAATCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR TCA 90 bp CTTGATTGTGCAGTTCTGATTCCAGGGTGGCCTCATGGTGACTTTGGACCTGGACTTAAAACAAGTCGCTaGGCAGCTCGGAGCCTGTTA +
Preference number: 4 (lower is better)
Translates to: LDCAVLIPGWPHGDFGPGLKTSR*AARSLL
Trigger: TAACAGGCTCCGAGCTGCTCAGCGACTTGTTTTAAG...TCCAGGTCCAAAGTCACCATGAGGCCACCCTGGAATCAGAACTGCACAATCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359872.6
CDS-3UTR GCA 90 bp TGTTCCTTGTCCTGGGTCTTGGGCCTCAAGGTCTGTTTGGAGGGAGTGCTGGGTCTGAACTTTCACTCCTaGTTCAAATGTCGTTTCCTC +
Preference number: 4 (lower is better)
Translates to: CSLSWVLGLKVCLEGVLGLNFHS*FKCRFL
Trigger: GAGGAAACGACATTTGAAGCAGGAGTGAAAGTTCAG...ACCCAGCACTCCCTCCAAACAGACCTTGAGGCCCAAGACCCAGGACAAGGAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR GCA 90 bp CTTGATTGTGCAGTTCTGATTCCAGGGTGGCCTCATGGTGACTTTGGACCTGGACTAGTCTGCAATGTGTaGATAGGGGGCTCTTGCTTC +
Preference number: 4 (lower is better)
Translates to: LDCAVLIPGWPHGDFGPGLVCNV*IGGSCF
Trigger: GAAGCAAGAGCCCCCTATGCACACATTGCAGACTAG...TCCAGGTCCAAAGTCACCATGAGGCCACCCTGGAATCAGAACTGCACAATCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR GCA 90 bp ACAAGACAGACGTGGAGGTGGCGCCACAAGAAGTCTGAGCATGCAGGTGCTTTAAAGCATCGCGCCAGATaGTGTGAGTTTATCCTGAGA +
Preference number: 4 (lower is better)
Translates to: TRQTWRWRHKKSEHAGALKHRAR*CEFILR
Trigger: TCTCAGGATAAACTCACAGCATCTGGCGCGATGCTT...TAAAGCACCTGCATGCTCAGACTTCTTGTGGCGCCACCTCCACGTCTGTCTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359872.6
CDS-3UTR CCA 90 bp GACAGACGTGGAGGTGGCGCCACAAGAAGTCTGAGCATGCAGGTGCTTTATACATCTTCTCAAGGTACTTaGCTGATGTCTTGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: DRRGGGATRSLSMQVLYTSSQGT*LMSCWG
Trigger: TCCCCAGCAAGACATCAGCCAAGTACCTTGAGAAGA...TGTATAAAGCACCTGCATGCTCAGACTTCTTGTGGCGCCACCTCCACGTCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR CCA 90 bp CAAGAACTGAATGTAGCAGAGAGTCCCATGGGTTCCCTCTTGATTGTGCAGTTCAGACAGACGTGGAGGTaGCGCCACAAGAAGTCTGAG +
Preference number: 4 (lower is better)
Translates to: QELNVAESPMGSLLIVQFRQTWR*RHKKSE
Trigger: CTCAGACTTCTTGTGGCGCCACCTCCACGTCTGTCT...GAACTGCACAATCAAGAGGGAACCCATGGGACTCTCTGCTACATTCAGTTCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR CCA 90 bp ACAAGACAGACGTGGAGGTGGCGCCACAAGAAGTCTGAGCATGCAGGTGCTTTAGTGCAGTTCCGCAACTaGCTTCAGGTTGATCGAATT +
Preference number: 4 (lower is better)
Translates to: TRQTWRWRHKKSEHAGALVQFRN*LQVDRI
Trigger: AATTCGATCAACCTGAAGCCAGTTGCGGAACTGCAC...TAAAGCACCTGCATGCTCAGACTTCTTGTGGCGCCACCTCCACGTCTGTCTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359872.6
CDS-3UTR TCA 90 bp CTTGATTGTGCAGTTCTGATTCCAGGGTGGCCTCATGGTGACTTTGGACCTGGACGGTTCCTTTTCCCATaGTGTTTTGGACTCCGAATG +
Preference number: 4 (lower is better)
Translates to: LDCAVLIPGWPHGDFGPGRFLFP*CFGLRM
Trigger: CATTCGGAGTCCAAAACATCATGGGAAAAGGAACCG...TCCAGGTCCAAAGTCACCATGAGGCCACCCTGGAATCAGAACTGCACAATCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359872.6
CDS-3UTR TCA 90 bp ACAAGACAGACGTGGAGGTGGCGCCACAAGAAGTCTGAGCATGCAGGTGCTTTACAACTGGCTTCAGGTTaGTCGAATTTCAGAGAAGAG +
Preference number: 4 (lower is better)
Translates to: TRQTWRWRHKKSEHAGALQLASG*SNFREE
Trigger: CTCTTCTCTGAAATTCGATCAACCTGAAGCCAGTTG...TAAAGCACCTGCATGCTCAGACTTCTTGTGGCGCCACCTCCACGTCTGTCTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359872.6
CDS-3UTR CCA 90 bp CTGGCAGTGAGATGTGATGGCAGGTTCGTTCTTGGACAGTTCCAGAGTGTGACTCTCTTGGATGAAAGGTaGCTCAGACTGACTGTGGAT +
Preference number: 4 (lower is better)
Translates to: LAVRCDGRFVLGQFQSVTLLDER*LRLTVD
Trigger: ATCCACAGTCAGTCTGAGCCACCTTTCATCCAAGAG...AGTCACACTCTGGAACTGTCCAAGAACGAACCTGCCATCACATCTCACTGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR CCA 90 bp CAAGAACTGAATGTAGCAGAGAGTCCCATGGGTTCCCTCTTGATTGTGCAGTTCTGTACAAGACAGACGTaGAGGTGGCGCCACAAGAAG +
Preference number: 4 (lower is better)
Translates to: QELNVAESPMGSLLIVQFCTRQT*RWRHKK
Trigger: CTTCTTGTGGCGCCACCTCCACGTCTGTCTTGTACA...GAACTGCACAATCAAGAGGGAACCCATGGGACTCTCTGCTACATTCAGTTCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR CCA 90 bp AGCTTGCTGTTCCTTGTCCTGGGTCTTGGGCCTCAAGGTCTGTTTGGAGGGAGTTTTCCCATGATGTTTTaGACTCCGAATGCCGTTTCT +
Preference number: 4 (lower is better)
Translates to: SLLFLVLGLGPQGLFGGSFPMMF*TPNAVS
Trigger: AGAAACGGCATTCGGAGTCCAAAACATCATGGGAAA...ACTCCCTCCAAACAGACCTTGAGGCCCAAGACCCAGGACAAGGAACAGCAAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359872.6
CDS-3UTR TCA 90 bp CTGGCAGTGAGATGTGATGGCAGGTTCGTTCTTGGACAGTTCCAGAGTGTGACTCAATCCTACAGGCGGTaGTGCTGTAAACAGGAAAAA +
Preference number: 4 (lower is better)
Translates to: LAVRCDGRFVLGQFQSVTQSYRR*CCKQEK
Trigger: TTTTTCCTGTTTACAGCATCACCGCCTGTAGGATTG...AGTCACACTCTGGAACTGTCCAAGAACGAACCTGCCATCACATCTCACTGCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR CCA 90 bp GACAGACGTGGAGGTGGCGCCACAAGAAGTCTGAGCATGCAGGTGCTTTATACAGGTTTCAGAGTGGTTTaGCATTGTGTCACAAGTACT +
Preference number: 4 (lower is better)
Translates to: DRRGGGATRSLSMQVLYTGFRVV*HCVTST
Trigger: AGTACTTGTGACACAATGCCAAACCACTCTGAAACC...TGTATAAAGCACCTGCATGCTCAGACTTCTTGTGGCGCCACCTCCACGTCTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR CCA 90 bp AGACAGACGTGGAGGTGGCGCCACAAGAAGTCTGAGCATGCAGGTGCTTTATACCTGATGGTTTCAGAGTaGTTTGGCATTGTGTCACAA +
Preference number: 4 (lower is better)
Translates to: RQTWRWRHKKSEHAGALYLMVSE*FGIVSQ
Trigger: TTGTGACACAATGCCAAACCACTCTGAAACCATCAG...GTATAAAGCACCTGCATGCTCAGACTTCTTGTGGCGCCACCTCCACGTCTGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR CCA 90 bp CAAGAACTGAATGTAGCAGAGAGTCCCATGGGTTCCCTCTTGATTGTGCAGTTCACACTGGAAACCGCGTaGAGGAGTGTCATGTACAAG +
Preference number: 4 (lower is better)
Translates to: QELNVAESPMGSLLIVQFTLETA*RSVMYK
Trigger: CTTGTACATGACACTCCTCCACGCGGTTTCCAGTGT...GAACTGCACAATCAAGAGGGAACCCATGGGACTCTCTGCTACATTCAGTTCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR TCA 90 bp CTGGCAGTGAGATGTGATGGCAGGTTCGTTCTTGGACAGTTCCAGAGTGTGACTTTTGCCATCCTCGCCTaGGTTAAACATGTAACACTT +
Preference number: 4 (lower is better)
Translates to: LAVRCDGRFVLGQFQSVTFAILA*VKHVTL
Trigger: AAGTGTTACATGTTTAACTCAGGCGAGGATGGCAAA...AGTCACACTCTGGAACTGTCCAAGAACGAACCTGCCATCACATCTCACTGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR TCA 90 bp CTTGATTGTGCAGTTCTGATTCCAGGGTGGCCTCATGGTGACTTTGGACCTGGAATGAACAATCCCATCTaGCCACCAATATCACCAAGT +
Preference number: 4 (lower is better)
Translates to: LDCAVLIPGWPHGDFGPGMNNPI*PPISPS
Trigger: ACTTGGTGATATTGGTGGTCAGATGGGATTGTTCAT...TCCAGGTCCAAAGTCACCATGAGGCCACCCTGGAATCAGAACTGCACAATCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR GCA 90 bp CAAGAACTGAATGTAGCAGAGAGTCCCATGGGTTCCCTCTTGATTGTGCAGTTCCTTCGTCCTCCTCTTTaGCAAGCAGGTCTAATAGCT +
Preference number: 4 (lower is better)
Translates to: QELNVAESPMGSLLIVQFLRPPL*QAGLIA
Trigger: AGCTATTAGACCTGCTTGGCAAAGAGGAGGACGAAG...GAACTGCACAATCAAGAGGGAACCCATGGGACTCTCTGCTACATTCAGTTCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR CCA 90 bp CTGGCAGTGAGATGTGATGGCAGGTTCGTTCTTGGACAGTTCCAGAGTGTGACTGGTTTCAGAGTGGTTTaGCATTGTGTCACAAGTACT +
Preference number: 4 (lower is better)
Translates to: LAVRCDGRFVLGQFQSVTGFRVV*HCVTST
Trigger: AGTACTTGTGACACAATGCCAAACCACTCTGAAACC...AGTCACACTCTGGAACTGTCCAAGAACGAACCTGCCATCACATCTCACTGCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR TCA 90 bp CAAGAACTGAATGTAGCAGAGAGTCCCATGGGTTCCCTCTTGATTGTGCAGTTCTTTGCCATCCTCGCCTaGGTTAAACATGTAACACTT +
Preference number: 4 (lower is better)
Translates to: QELNVAESPMGSLLIVQFFAILA*VKHVTL
Trigger: AAGTGTTACATGTTTAACTCAGGCGAGGATGGCAAA...GAACTGCACAATCAAGAGGGAACCCATGGGACTCTCTGCTACATTCAGTTCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR GCA 90 bp CAAGAACTGAATGTAGCAGAGAGTCCCATGGGTTCCCTCTTGATTGTGCAGTTCCTGAACTTTCACTCCTaGTTCAAATGTCGTTTCCTC +
Preference number: 4 (lower is better)
Translates to: QELNVAESPMGSLLIVQFLNFHS*FKCRFL
Trigger: GAGGAAACGACATTTGAAGCAGGAGTGAAAGTTCAG...GAACTGCACAATCAAGAGGGAACCCATGGGACTCTCTGCTACATTCAGTTCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS TCA 90 bp CGGGCGCCGGCTCCTCGCGGGCCATGCGGAAGCGTCCCGGGCCGGTaGGCGCGGCTGCGGGCAGCCCGGCTCCGCCAATCCGGCTCATTC +
Preference number: 5 (lower is better)
Translates to: RAPAPRGPCGSVPGR*ARLRAARLRQSGSF
Trigger: GAATGAGCCGGATTGGCGGAGCCGGGCTGCCCGCAGCCGCGCTCACCGGCCCGGGACGCTTCCGCATGGCCCGCGAGGAGCCGGCGCCCG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225823.7
CDS CCA 90 bp GGCCCCAGGCGAACTTGGGCAGCGGCCGCGCGACGCTGGCGCGGCTaGGCTCCGAGCACCTGCTCCTCAGCTCGCTGGCCCCGCGGCTCC +
Preference number: 5 (lower is better)
Translates to: GPRRTWAAAARRWRG*APSTCSSARWPRGS
Trigger: GGAGCCGCGGGGCCAGCGAGCTGAGGAGCAGGTGCTCGGAGCCCAGCCGCGCCAGCGTCGCGCGGCCGCTGCCCAAGTTCGCCTGGGGCC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000225823.7
CDS TCA 90 bp TGCGGAACCACTGGCGGCGCGGCTCGTCGCCCCGCAGCAGCTCGCTaGCAAGCGGGCGCGCGGTGCGGTTGGGCAGCAGCAGCCCGAGCC +
Preference number: 5 (lower is better)
Translates to: CGTTGGAARRPAAAR*QAGARCGWAAAARA
Trigger: GGCTCGGGCTGCTGCTGCCCAACCGCACCGCGCGCCCGCTTGTCAGCGAGCTGCTGCGGGGCGACGAGCCGCGCCGCCAGTGGTTCCGCA
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225823.7
CDS GCA 90 bp GAGCCCCCAGCCGCCGTGCGCCCGGCACACATGTGCCGCAGCCCGTaGAGTTTAGCGCGGCTCAGCGATGGCCGCCCCCTGCGGGCGACC +
Preference number: 5 (lower is better)
Translates to: EPPAAVRPAHMCRSP*SLARLSDGRPLRAT
Trigger: GGTCGCCCGCAGGGGGCGGCCATCGCTGAGCCGCGCTAAACTGCACGGGCTGCGGCACATGTGTGCCGGGCGCACGGCGGCTGGGGGCTC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000225823.7
CDS GCA 90 bp CGCCGCTGGAAGGAGCCCCCAGCCGCCGTGCGCCCGGCACACATGTaGCGCAGCCCGTGCAGTTTAGCGCGGCTCAGCGATGGCCGCCCC +
Preference number: 5 (lower is better)
Translates to: RRWKEPPAAVRPAHM*RSPCSLARLSDGRP
Trigger: GGGGCGGCCATCGCTGAGCCGCGCTAAACTGCACGGGCTGCGGCACATGTGTGCCGGGCGCACGGCGGCTGGGGGCTCCTTCCAGCGGCG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000225823.7
CDS CCA 90 bp CCCTCTTTGGGCCCCAGGCGAACTTGGGCAGCGGCCGCGCGACGCTaGCGCGGCTGGGCTCCGAGCACCTGCTCCTCAGCTCGCTGGCCC +
Preference number: 5 (lower is better)
Translates to: PSLGPRRTWAAAARR*RGWAPSTCSSARWP
Trigger: GGGCCAGCGAGCTGAGGAGCAGGTGCTCGGAGCCCAGCCGCGCCAGCGTCGCGCGGCCGCTGCCCAAGTTCGCCTGGGGCCCAAAGAGGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225823.7
CDS GCA 90 bp CTCCTCGCGGGCCATGCGGAAGCGTCCCGGGCCGGTGAGCGCGGCTaGGGGCAGCCCGGCTCCGCCAATCCGGCTCATTCATTCAGCCCG +
Preference number: 5 (lower is better)
Translates to: LLAGHAEASRAGERG*GQPGSANPAHSFSP
Trigger: CGGGCTGAATGAATGAGCCGGATTGGCGGAGCCGGGCTGCCCGCAGCCGCGCTCACCGGCCCGGGACGCTTCCGCATGGCCCGCGAGGAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225823.7
CDS CCA 90 bp TTCCCCGGTTGCCCGGGAGAACCCTCTTTGGGCCCCAGGCGAACTTaGGCAGCGGCCGCGCGACGCTGGCGCGGCTGGGCTCCGAGCACC +
Preference number: 5 (lower is better)
Translates to: FPGCPGEPSLGPRRT*AAAARRWRGWAPST
Trigger: GGTGCTCGGAGCCCAGCCGCGCCAGCGTCGCGCGGCCGCTGCCCAAGTTCGCCTGGGGCCCAAAGAGGGTTCTCCCGGGCAACCGGGGAA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000225823.7
CDS GCA 90 bp TCTGGAGGGGTCCCACTGGGAGCCGCCTCTCCAGTCCCTGGGTGCTaGGCCCGCCTTCCCTCGTCCTGGACCTCGGGGGACCCTGAGCCG +
Preference number: 5 (lower is better)
Translates to: SGGVPLGAASPVPGC*ARLPSSWTSGDPEP
Trigger: CGGCTCAGGGTCCCCCGAGGTCCAGGACGAGGGAAGGCGGGCGCAGCACCCAGGGACTGGAGAGGCGGCTCCCAGTGGGACCCCTCCAGA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000225823.7
CDS GCA 90 bp CCTCGAAGTGGCGCGGAGGCAGGAAGAGGCGGAAGTCCGCCAGCTTaGGGAACCACTGGCGGCGCGGCTCGTCGCCCCGCAGCAGCTCGC +
Preference number: 5 (lower is better)
Translates to: PRSGAEAGRGGSPPA*GTTGGAARRPAAAR
Trigger: GCGAGCTGCTGCGGGGCGACGAGCCGCGCCGCCAGTGGTTCCGCAAGCTGGCGGACTTCCGCCTCTTCCTGCCTCCGCGCCACTTCGAGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225823.7
CDS CCA 90 bp CGCGGAGGCAGGAAGAGGCGGAAGTCCGCCAGCTTGCGGAACCACTaGCGGCGCGGCTCGTCGCCCCGCAGCAGCTCGCTGACAAGCGGG +
Preference number: 5 (lower is better)
Translates to: RGGRKRRKSASLRNH*RRGSSPRSSSLTSG
Trigger: CCCGCTTGTCAGCGAGCTGCTGCGGGGCGACGAGCCGCGCCGCCAGTGGTTCCGCAAGCTGGCGGACTTCCGCCTCTTCCTGCCTCCGCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225823.7
CDS TCA 90 bp AGTCCTGCGCCTAAGTCCTGCCAGGCGCCCGCTCTCGCCTGGGGCTaGGAGCTTCTCAGGGCGTCCTGCGGGAGGCTGTTCGCCGCCGGG +
Preference number: 5 (lower is better)
Translates to: SPAPKSCQAPALAWG*ELLRASCGRLFAAG
Trigger: CCCGGCGGCGAACAGCCTCCCGCAGGACGCCCTGAGAAGCTCTCAGCCCCAGGCGAGAGCGGGCGCCTGGCAGGACTTAGGCGCAGGACT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225823.7
CDS CCA 90 bp CTGGAGGATGCCCGGCGCCCGGCACTACTTCTGGAGGGGTCCCACTaGGAGCCGCCTCTCCAGTCCCTGGGTGCTGCGCCCGCCTTCCCT +
Preference number: 5 (lower is better)
Translates to: LEDARRPALLLEGSH*EPPLQSLGAAPAFP
Trigger: AGGGAAGGCGGGCGCAGCACCCAGGGACTGGAGAGGCGGCTCCCAGTGGGACCCCTCCAGAAGTAGTGCCGGGCGCCGGGCATCCTCCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225823.7
CDS GCA 90 bp ACTTCTGGAGGGGTCCCACTGGGAGCCGCCTCTCCAGTCCCTGGGTaGTGCGCCCGCCTTCCCTCGTCCTGGACCTCGGGGGACCCTGAG +
Preference number: 5 (lower is better)
Translates to: TSGGVPLGAASPVPG*CARLPSSWTSGDPE
Trigger: CTCAGGGTCCCCCGAGGTCCAGGACGAGGGAAGGCGGGCGCAGCACCCAGGGACTGGAGAGGCGGCTCCCAGTGGGACCCCTCCAGAAGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000225823.7
CDS CCA 90 bp CACTACTTCTGGAGGGGTCCCACTGGGAGCCGCCTCTCCAGTCCCTaGGTGCTGCGCCCGCCTTCCCTCGTCCTGGACCTCGGGGGACCC +
Preference number: 5 (lower is better)
Translates to: HYFWRGPTGSRLSSP*VLRPPSLVLDLGGP
Trigger: GGGTCCCCCGAGGTCCAGGACGAGGGAAGGCGGGCGCAGCACCCAGGGACTGGAGAGGCGGCTCCCAGTGGGACCCCTCCAGAAGTAGTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000225823.7
CDS CCA 90 bp GGCCCCTGGTCTTCCTGGAGGATGCCCGGCGCCCGGCACTACTTCTaGAGGGGTCCCACTGGGAGCCGCCTCTCCAGTCCCTGGGTGCTG +
Preference number: 5 (lower is better)
Translates to: GPWSSWRMPGARHYF*RGPTGSRLSSPWVL
Trigger: CAGCACCCAGGGACTGGAGAGGCGGCTCCCAGTGGGACCCCTCCAGAAGTAGTGCCGGGCGCCGGGCATCCTCCAGGAAGACCAGGGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000225823.7
CDS CCA 90 bp CTGGCAGTGGCCTCTCCCGAGCGCCTCCCAGGCTTTCCCGGCCCCTaGTCTTCCTGGAGGATGCCCGGCGCCCGGCACTACTTCTGGAGG +
Preference number: 5 (lower is better)
Translates to: LAVASPERLPGFPGP*SSWRMPGARHYFWR
Trigger: CCTCCAGAAGTAGTGCCGGGCGCCGGGCATCCTCCAGGAAGACCAGGGGCCGGGAAAGCCTGGGAGGCGCTCGGGAGAGGCCACTGCCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225823.7
CDS TCA 90 bp TCCGCGCGCCCTTCTCCTCTCGAGACTCCGAGCTCGCGGTGGCCGTaGCGCCGGCTAAGCTCCTTCCCCGGTTGCCCGGGAGAACCCTCT +
Preference number: 5 (lower is better)
Translates to: SARPSPLETPSSRWP*RRLSSFPGCPGEPS
Trigger: AGAGGGTTCTCCCGGGCAACCGGGGAAGGAGCTTAGCCGGCGTCACGGCCACCGCGAGCTCGGAGTCTCGAGAGGAGAAGGGCGCGCGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225823.7
CDS CCA 90 bp GGGAGAGGAGGCAGCGCGCGGCGCGGAGAGGCGAGGACCGGTATCTaGAGACTGGGGACGGAAGCGGGGAGCTCAGACCGGGATCCATTC +
Preference number: 5 (lower is better)
Translates to: GRGGSARRGEARTGI*RLGTEAGSSDRDPF
Trigger: GAATGGATCCCGGTCTGAGCTCCCCGCTTCCGTCCCCAGTCTCCAGATACCGGTCCTCGCCTCTCCGCGCCGCGCGCTGCCTCCTCTCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359872.6
ENST00000583395.1
CDS GCA 90 bp ATGTTAACCATCCTGGGGGATGTCAGGGCGGCCACGCTGATGCACTaGGGTCGGGCGCAGCGGCACAGCCTTCAGAGCCGCCGCCGCTCG +
Preference number: 5 (lower is better)
Translates to: MLTILGDVRAATLMH*GRAQRHSLQSRRRS
Trigger: CGAGCGGCGGCGGCTCTGAAGGCTGTGCCGCTGCGCCCGACCGCAGTGCATCAGCGTGGCCGCCCTGACATCCCCCAGGATGGTTAACAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359872.6
CDS CCA 90 bp GAGGCAGCGCGCGGCGCGGAGAGGCGAGGACCGGTATCTGGAGACTaGGGACGGAAGCGGGGAGCTCAGACCGGGATCCATTCTCTCCTC +
Preference number: 5 (lower is better)
Translates to: EAARGAERRGPVSGD*GRKRGAQTGIHSLL
Trigger: GAGGAGAGAATGGATCCCGGTCTGAGCTCCCCGCTTCCGTCCCCAGTCTCCAGATACCGGTCCTCGCCTCTCCGCGCCGCGCGCTGCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359872.6
ENST00000583395.1
CDS CCA 90 bp TGGTGGCCCAGGCGGTCCATGAAGGCGGCGCTGATTCCCTCGAAGTaGCGCGGAGGCAGGAAGAGGCGGAAGTCCGCCAGCTTGCGGAAC +
Preference number: 5 (lower is better)
Translates to: WWPRRSMKAALIPSK*RGGRKRRKSASLRN
Trigger: GTTCCGCAAGCTGGCGGACTTCCGCCTCTTCCTGCCTCCGCGCCACTTCGAGGGAATCAGCGCCGCCTTCATGGACCGCCTGGGCCACCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225823.7
CDS CCA 90 bp CGCAGCGGGTTGTTGTTGCACACAGTGACGGCGGGGAAGGGTAACTaGCGGCTCCACTCGCGGTGCACCCGCGTGTGTGACGGGAAGCTG +
Preference number: 5 (lower is better)
Translates to: RSGLLLHTVTAGKGN*RLHSRCTRVCDGKL
Trigger: CAGCTTCCCGTCACACACGCGGGTGCACCGCGAGTGGAGCCGCCAGTTACCCTTCCCCGCCGTCACTGTGTGCAACAACAACCCGCTGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225823.7
CDS-3UTR CAA 90 bp GACCTGGAATCTGGTCCCACTGCACGGGCAGCAGTGTGGACACTGGAAACCGCGTGGCGCGGGTCACCTTaGGCGCCGAAGCCCCATGGG +
Preference number: 5 (lower is better)
Translates to: DLESGPTARAAVWTLETAWRGSP*APKPHG
Trigger: CCCATGGGGCTTCGGCGCCAAAGGTGACCCGCGCCA...CGCGGTTTCCAGTGTCCACACTGCTGCCCGTGCAGTGGGACCAGATTCCAGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS TCA 90 bp ACTGGCGGCTCCACTCGCGGTGCACCCGCGTGTGTGACGGGAAGCTaGGCCAGTAGAGCAAGCGGTTCGAGGACCAGGACAGCAGCAAGC +
Preference number: 5 (lower is better)
Translates to: TGGSTRGAPACVTGS*ASRASGSRTRTAAS
Trigger: GCTTGCTGCTGTCCTGGTCCTCGAACCGCTTGCTCTACTGGCTCAGCTTCCCGTCACACACGCGGGTGCACCGCGAGTGGAGCCGCCAGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225823.7
CDS-3UTR CAA 90 bp TGGGTCTTGGGCCTCAAGGTCTGTTTGGAGGGAGTGCTGGGTGACTCGAGGGGTCGGAAGTCCGCCAGCTaGCGGAACCACTGGCGGCGC +
Preference number: 5 (lower is better)
Translates to: WVLGLKVCLEGVLGDSRGRKSAS*RNHWRR
Trigger: GCGCCGCCAGTGGTTCCGCAAGCTGGCGGACTTCCG...ACCCCTCGAGTCACCCAGCACTCCCTCCAAACAGACCTTGAGGCCCAAGACCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225823.7
CDS-3UTR CAA 90 bp TGGGTCTTGGGCCTCAAGGTCTGTTTGGAGGGAGTGCTGGGTGACTCGAGGGGTTGGCGCGGGTCACCTTaGGCGCCGAAGCCCCATGGG +
Preference number: 5 (lower is better)
Translates to: WVLGLKVCLEGVLGDSRGWRGSP*APKPHG
Trigger: CCCATGGGGCTTCGGCGCCAAAGGTGACCCGCGCCA...ACCCCTCGAGTCACCCAGCACTCCCTCCAAACAGACCTTGAGGCCCAAGACCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS GCA 90 bp CCGCCGCCGCTCGGTTCCTTTTCCCATGATGTTTTGGACTCCGAATaGCGTTTCTCGCCGCCGGCCTCCGTCCCTCCTCTCCTCCTCCTC +
Preference number: 5 (lower is better)
Translates to: PPPLGSFSHDVLDSE*RFSPPASVPPLLLL
Trigger: GAGGAGGAGGAGAGGAGGGACGGAGGCCGGCGGCGAGAAACGGCATTCGGAGTCCAAAACATCATGGGAAAAGGAACCGAGCGGCGGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359872.6
CDS TCA 90 bp AGCGGCACAGCCTTCAGAGCCGCCGCCGCTCGGTTCCTTTTCCCATaGTGTTTTGGACTCCGAATGCCGTTTCTCGCCGCCGGCCTCCGT +
Preference number: 5 (lower is better)
Translates to: SGTAFRAAAARFLFP*CFGLRMPFLAAGLR
Trigger: ACGGAGGCCGGCGGCGAGAAACGGCATTCGGAGTCCAAAACATCATGGGAAAAGGAACCGAGCGGCGGCGGCTCTGAAGGCTGTGCCGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359872.6
CDS GCA 90 bp ATGGGGGACGGAGGCCAGGTGAAGGGCCCAACCCTGGCGCACCACTaGTCAGTTCCGCTGGATGCTCAAGACTCGGAGGAGAAGTTGTGC +
Preference number: 5 (lower is better)
Translates to: MGDGGQVKGPTLAHH*SVPLDAQDSEEKLC
Trigger: GCACAACTTCTCCTCCGAGTCTTGAGCATCCAGCGGAACTGAGCAGTGGTGCGCCAGGGTTGGGCCCTTCACCTGGCCTCCGTCCCCCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448983.1
CDS CCA 90 bp AGCCTTCAGAGCCGCCGCCGCTCGGTTCCTTTTCCCATGATGTTTTaGACTCCGAATGCCGTTTCTCGCCGCCGGCCTCCGTCCCTCCTC +
Preference number: 5 (lower is better)
Translates to: SLQSRRRSVPFPMMF*TPNAVSRRRPPSLL
Trigger: GAGGAGGGACGGAGGCCGGCGGCGAGAAACGGCATTCGGAGTCCAAAACATCATGGGAAAAGGAACCGAGCGGCGGCGGCTCTGAAGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359872.6
CDS-3UTR CAA 90 bp TGGGTCTTGGGCCTCAAGGTCTGTTTGGAGGGAGTGCTGGGTGACTCGAGGGGTAACACGGAGGAGAAGTaGTGCGGCCCGCAGAGCTCG +
Preference number: 5 (lower is better)
Translates to: WVLGLKVCLEGVLGDSRGNTEEK*CGPQSS
Trigger: CGAGCTCTGCGGGCCGCACAACTTCTCCTCCGTGTT...ACCCCTCGAGTCACCCAGCACTCCCTCCAAACAGACCTTGAGGCCCAAGACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225823.7
CDS CCA 90 bp CCTTGTCCTGGGTCTTGGGCCTCAAGGTCTGTTTGGAGGGAGTGCTaGGTGACTCGAGGGGTGTCAGCAGGCAATCTCCTCCAAGGTCCC +
Preference number: 5 (lower is better)
Translates to: PCPGSWASRSVWREC*VTRGVSAGNLLQGP
Trigger: GGGACCTTGGAGGAGATTGCCTGCTGACACCCCTCGAGTCACCCAGCACTCCCTCCAAACAGACCTTGAGGCCCAAGACCCAGGACAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR CAA 90 bp TGGGTCTTGGGCCTCAAGGTCTGTTTGGAGGGAGTGCTGGGTGACTCGAGGGGTGGGAAGCGCAGCGGGTaGTTGTTGCACACAGTGACG +
Preference number: 5 (lower is better)
Translates to: WVLGLKVCLEGVLGDSRGGKRSG*LLHTVT
Trigger: CGTCACTGTGTGCAACAACAACCCGCTGCGCTTCCC...ACCCCTCGAGTCACCCAGCACTCCCTCCAAACAGACCTTGAGGCCCAAGACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225823.7
CDS-3UTR CAA 90 bp TGGACCTGGAATCTGGTCCCACTGCACGGGCAGCAGTGTGGACACTGGAAACCGGGCCTCAAGGTCTGTTaGGAGGGAGTGCTGGGTGAC +
Preference number: 5 (lower is better)
Translates to: WTWNLVPLHGQQCGHWKPGLKVC*EGVLGD
Trigger: GTCACCCAGCACTCCCTCCAAACAGACCTTGAGGCC...CGGTTTCCAGTGTCCACACTGCTGCCCGTGCAGTGGGACCAGATTCCAGGTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR CAA 90 bp TGGGTCTTGGGCCTCAAGGTCTGTTTGGAGGGAGTGCTGGGTGACTCGAGGGGTGGCCTCAAGGTCTGTTaGGAGGGAGTGCTGGGTGAC +
Preference number: 5 (lower is better)
Translates to: WVLGLKVCLEGVLGDSRGGLKVC*EGVLGD
Trigger: GTCACCCAGCACTCCCTCCAAACAGACCTTGAGGCC...ACCCCTCGAGTCACCCAGCACTCCCTCCAAACAGACCTTGAGGCCCAAGACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR CAA 90 bp GTGGACACTGGAAACCGCGTGGAGGAGTGTCATGTACAAGACAGACGTGGAGGTCCGGGAGAACCCTCTTaGGGCCCCAGGCGAACTTGG +
Preference number: 5 (lower is better)
Translates to: VDTGNRVEECHVQDRRGGPGEPS*GPRRTW
Trigger: CCAAGTTCGCCTGGGGCCCAAAGAGGGTTCTCCCGG...ACCTCCACGTCTGTCTTGTACATGACACTCCTCCACGCGGTTTCCAGTGTCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225823.7
CDS-3UTR CAA 90 bp TCATCTCTCCTAAGAGGGACGCACGGCGGGGCCCAAGGATGCGTCGTGTTGGACCAGAAAAGCCCAGCCTaGCTGTCTCTCGCGTCTTCT +
Preference number: 5 (lower is better)
Translates to: SSLLRGTHGGAQGCVVLDQKSPA*LSLASS
Trigger: AGAAGACGCGAGAGACAGCAAGGCTGGGCTTTTCTG...GTCCAACACGACGCATCCTTGGGCCCCGCCGTGCGTCCCTCTTAGGAGAGATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000225823.7
CDS-3UTR CAA 90 bp CAGCAGTGTGGACACTGGAAACCGCGTGGAGGAGTGTCATGTACAAGACAGACGCGCAGCGGGTTGTTGTaGCACACAGTGACGGCGGGG +
Preference number: 5 (lower is better)
Translates to: QQCGHWKPRGGVSCTRQTRSGLL*HTVTAG
Trigger: CCCCGCCGTCACTGTGTGCAACAACAACCCGCTGCG...CGTCTGTCTTGTACATGACACTCCTCCACGCGGTTTCCAGTGTCCACACTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225823.7
CDS-3UTR CAA 90 bp TGGACCTGGAATCTGGTCCCACTGCACGGGCAGCAGTGTGGACACTGGAAACCGGTGCATAGGGGGCTCTaGCTTCTTTCCAGCACTGGG +
Preference number: 5 (lower is better)
Translates to: WTWNLVPLHGQQCGHWKPVHRGL*LLSSTG
Trigger: CCCAGTGCTGGAAAGAAGCAAGAGCCCCCTATGCAC...CGGTTTCCAGTGTCCACACTGCTGCCCGTGCAGTGGGACCAGATTCCAGGTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR CAA 90 bp AGCTTGCTGTTCCTTGTCCTGGGTCTTGGGCCTCAAGGTCTGTTTGGAGGGAGTCAAGGATGCGTCGTGTaGGACGTGGCCGGAGCGAGG +
Preference number: 5 (lower is better)
Translates to: SLLFLVLGLGPQGLFGGSQGCVV*DVAGAR
Trigger: CCTCGCTCCGGCCACGTCCAACACGACGCATCCTTG...ACTCCCTCCAAACAGACCTTGAGGCCCAAGACCCAGGACAAGGAACAGCAAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS GCA 90 bp GTTCCTTGTCCTGGGTCTTGGGCCTCAAGGTCTGTTTGGAGGGAGTaGTGGGTGACTCGAGGGGTGTCAGCAGGCAATCTCCTCCAAGGT +
Preference number: 5 (lower is better)
Translates to: VPCPGSWASRSVWRE*WVTRGVSAGNLLQG
Trigger: ACCTTGGAGGAGATTGCCTGCTGACACCCCTCGAGTCACCCAGCACTCCCTCCAAACAGACCTTGAGGCCCAAGACCCAGGACAAGGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS CCA 90 bp GAGCTTGCTGTTCCTTGTCCTGGGTCTTGGGCCTCAAGGTCTGTTTaGAGGGAGTGCTGGGTGACTCGAGGGGTGTCAGCAGGCAATCTC +
Preference number: 5 (lower is better)
Translates to: ELAVPCPGSWASRSV*RECWVTRGVSAGNL
Trigger: GAGATTGCCTGCTGACACCCCTCGAGTCACCCAGCACTCCCTCCAAACAGACCTTGAGGCCCAAGACCCAGGACAAGGAACAGCAAGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR CAA 90 bp TGGGTCTTGGGCCTCAAGGTCTGTTTGGAGGGAGTGCTGGGTGACTCGAGGGGTGTGGTGAGCAGAGGTTaGCCATCCTCGCCTGAGTTA +
Preference number: 5 (lower is better)
Translates to: WVLGLKVCLEGVLGDSRGVVSRG*PSSPEL
Trigger: TAACTCAGGCGAGGATGGCAAACCTCTGCTCACCAC...ACCCCTCGAGTCACCCAGCACTCCCTCCAAACAGACCTTGAGGCCCAAGACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR CAA 90 bp AGACAGACGTGGAGGTGGCGCCACAAGAAGTCTGAGCATGCAGGTGCTTTATACCAAGGATGCGTCGTGTaGGACGTGGCCGGAGCGAGG +
Preference number: 5 (lower is better)
Translates to: RQTWRWRHKKSEHAGALYQGCVV*DVAGAR
Trigger: CCTCGCTCCGGCCACGTCCAACACGACGCATCCTTG...GTATAAAGCACCTGCATGCTCAGACTTCTTGTGGCGCCACCTCCACGTCTGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR CAA 90 bp TGGGTCTTGGGCCTCAAGGTCTGTTTGGAGGGAGTGCTGGGTGACTCGAGGGGTGCATGGTACAGGTCATaGGTGGTGAGCCTGGAGAAC +
Preference number: 5 (lower is better)
Translates to: WVLGLKVCLEGVLGDSRGAWYRS*VVSLEN
Trigger: GTTCTCCAGGCTCACCACCAATGACCTGTACCATGC...ACCCCTCGAGTCACCCAGCACTCCCTCCAAACAGACCTTGAGGCCCAAGACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359872.6
CDS-3UTR CAA 90 bp TGTACAAGACAGACGTGGAGGTGGCGCCACAAGAAGTCTGAGCATGCAGGTGCTCACTGTGGTGAAGTCTaGGTGGCCGCACTCCTGCCC +
Preference number: 5 (lower is better)
Translates to: CTRQTWRWRHKKSEHAGAHCGEV*VAALLP
Trigger: GGGCAGGAGTGCGGCCACCAAGACTTCACCACAGTG...AGCACCTGCATGCTCAGACTTCTTGTGGCGCCACCTCCACGTCTGTCTTGTACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359872.6
CDS CCA 90 bp GGGGCTTTCCTTGAGGTCCATCGGGACCCCGTGCAGTTCCGCAACTaGCTTCAGGTTGATCGAATTTCAGAGAAGAGCTCCCAGTCCTCG +
Preference number: 5 (lower is better)
Translates to: GAFLEVHRDPVQFRN*LQVDRISEKSSQSS
Trigger: CGAGGACTGGGAGCTCTTCTCTGAAATTCGATCAACCTGAAGCCAGTTGCGGAACTGCACGGGGTCCCGATGGACCTCAAGGAAAGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359872.6
CDS-3UTR CAA 90 bp TGTACAAGACAGACGTGGAGGTGGCGCCACAAGAAGTCTGAGCATGCAGGTGCTAAGCTCCTTCCCCGGTaGCCCGGGAGAACCCTCTTT +
Preference number: 5 (lower is better)
Translates to: CTRQTWRWRHKKSEHAGAKLLPR*PGRTLF
Trigger: AAAGAGGGTTCTCCCGGGCAACCGGGGAAGGAGCTT...AGCACCTGCATGCTCAGACTTCTTGTGGCGCCACCTCCACGTCTGTCTTGTACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225823.7
CDS-3UTR CAA 90 bp CAGCAGTGTGGACACTGGAAACCGCGTGGAGGAGTGTCATGTACAAGACAGACGAAGCGCAGCGGGTTGTaGTTGCACACAGTGACGGCG +
Preference number: 5 (lower is better)
Translates to: QQCGHWKPRGGVSCTRQTKRSGL*LHTVTA
Trigger: CGCCGTCACTGTGTGCAACAACAACCCGCTGCGCTT...CGTCTGTCTTGTACATGACACTCCTCCACGCGGTTTCCAGTGTCCACACTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225823.7
CDS GCA 90 bp AGGCTGCCCTCACTGGGGCTTTCCTTGAGGTCCATCGGGACCCCGTaGAGTTCCGCAACTGGCTTCAGGTTGATCGAATTTCAGAGAAGA +
Preference number: 5 (lower is better)
Translates to: RLPSLGLSLRSIGTP*SSATGFRLIEFQRR
Trigger: TCTTCTCTGAAATTCGATCAACCTGAAGCCAGTTGCGGAACTGCACGGGGTCCCGATGGACCTCAAGGAAAGCCCCAGTGAGGGCAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359872.6
CDS CCA 90 bp GAGCCTGGAGAACCGGAAGCCATTCAGGTTACAGAGGGTCACAGCTaGGAAGACCAGGCTTTGAGCCACCACTTCGTCCACCTTAGTGAC +
Preference number: 5 (lower is better)
Translates to: EPGEPEAIQVTEGHS*EDQALSHHFVHLSD
Trigger: GTCACTAAGGTGGACGAAGTGGTGGCTCAAAGCCTGGTCTTCCCAGCTGTGACCCTCTGTAACCTGAATGGCTTCCGGTTCTCCAGGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359872.6
CDS-3UTR CAA 90 bp AGCTTGCTGTTCCTTGTCCTGGGTCTTGGGCCTCAAGGTCTGTTTGGAGGGAGTGTGCATAGGGGGCTCTaGCTTCTTTCCAGCACTGGG +
Preference number: 5 (lower is better)
Translates to: SLLFLVLGLGPQGLFGGSVHRGL*LLSSTG
Trigger: CCCAGTGCTGGAAAGAAGCAAGAGCCCCCTATGCAC...ACTCCCTCCAAACAGACCTTGAGGCCCAAGACCCAGGACAAGGAACAGCAAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR CAA 90 bp CTTGATTGTGCAGTTCTGATTCCAGGGTGGCCTCATGGTGACTTTGGACCTGGATCACTGGGGCTTTCCTaGAGGTCCATCGGGACCCCG +
Preference number: 5 (lower is better)
Translates to: LDCAVLIPGWPHGDFGPGSLGLS*RSIGTP
Trigger: CGGGGTCCCGATGGACCTCAAGGAAAGCCCCAGTGA...TCCAGGTCCAAAGTCACCATGAGGCCACCCTGGAATCAGAACTGCACAATCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359872.6
CDS-3UTR CAA 90 bp TGTACAAGACAGACGTGGAGGTGGCGCCACAAGAAGTCTGAGCATGCAGGTGCTTGGGAAGACCAGGCTTaGAGCCACCACTTCGTCCAC +
Preference number: 5 (lower is better)
Translates to: CTRQTWRWRHKKSEHAGAWEDQA*SHHFVH
Trigger: GTGGACGAAGTGGTGGCTCAAAGCCTGGTCTTCCCA...AGCACCTGCATGCTCAGACTTCTTGTGGCGCCACCTCCACGTCTGTCTTGTACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359872.6
CDS TCA 90 bp GAATTTCAGAGAAGAGCTCCCAGTCCTCGGGCTCTGCTTAAACCTTaGCGTTCAGGGGAGAGAACGCAAGGCAAGCATCGCGCCAGATGC +
Preference number: 5 (lower is better)
Translates to: EFQRRAPSPRALLKP*RSGERTQGKHRARC
Trigger: GCATCTGGCGCGATGCTTGCCTTGCGTTCTCTCCCCTGAACGTCAAGGTTTAAGCAGAGCCCGAGGACTGGGAGCTCTTCTCTGAAATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359872.6
CDS GCA 90 bp GGTGAAGGGCCCAACCCTGGCGCACCACTGCTCAGTTCCGCTGGATaGTCAAGACTCCTGCATTTTGAAAAAGTAGCCAAAGCATGCTGC +
Preference number: 5 (lower is better)
Translates to: GEGPNPGAPLLSSAG*SRLLHFEKVAKACC
Trigger: GCAGCATGCTTTGGCTACTTTTTCAAAATGCAGGAGTCTTGAGCATCCAGCGGAACTGAGCAGTGGTGCGCCAGGGTTGGGCCCTTCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579816.1
CDS GCA 90 bp AAGCGGGGAGCTCAGACCGGGATCCATTCTCTCCTCGCCTCCCAATaGCACCTGGTTACAACTGGAAGATCCAGACTTCAAACCATGGTC +
Preference number: 5 (lower is better)
Translates to: KRGAQTGIHSLLASQ*HLVTTGRSRLQTMV
Trigger: GACCATGGTTTGAAGTCTGGATCTTCCAGTTGTAACCAGGTGGCATTGGGAGGCGAGGAGAGAATGGATCCCGGTCTGAGCTCCCCGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583395.1
CDS-3UTR CAA 90 bp GCAGTGTGGACACTGGAAACCGCGTGGAGGAGTGTCATGTACAAGACAGACGTGGTGGTGAGCAGAGGTTaGCCATCCTCGCCTGAGTTA +
Preference number: 5 (lower is better)
Translates to: AVWTLETAWRSVMYKTDVVVSRG*PSSPEL
Trigger: TAACTCAGGCGAGGATGGCAAACCTCTGCTCACCAC...CACGTCTGTCTTGTACATGACACTCCTCCACGCGGTTTCCAGTGTCCACACTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR CAA 90 bp GACCTGGAATCTGGTCCCACTGCACGGGCAGCAGTGTGGACACTGGAAACCGCGCAGAGTGGTTTGGCATaGTGTCACAAGTACTCACAT +
Preference number: 5 (lower is better)
Translates to: DLESGPTARAAVWTLETAQSGLA*CHKYSH
Trigger: ATGTGAGTACTTGTGACACAATGCCAAACCACTCTG...CGCGGTTTCCAGTGTCCACACTGCTGCCCGTGCAGTGGGACCAGATTCCAGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR CAA 90 bp CAGCAGTGTGGACACTGGAAACCGCGTGGAGGAGTGTCATGTACAAGACAGACGTCCTTGTCCTGGGTCTaGGGCCTCAAGGTCTGTTTG +
Preference number: 5 (lower is better)
Translates to: QQCGHWKPRGGVSCTRQTSLSWV*GLKVCL
Trigger: CAAACAGACCTTGAGGCCCAAGACCCAGGACAAGGA...CGTCTGTCTTGTACATGACACTCCTCCACGCGGTTTCCAGTGTCCACACTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR CAA 90 bp CAGCAGTGTGGACACTGGAAACCGCGTGGAGGAGTGTCATGTACAAGACAGACGCCTCCAGGCCCCCTTTaGTGGGCAGAATTCCAAATG +
Preference number: 5 (lower is better)
Translates to: QQCGHWKPRGGVSCTRQTPPGPL*WAEFQM
Trigger: CATTTGGAATTCTGCCCACAAAAGGGGGCCTGGAGG...CGTCTGTCTTGTACATGACACTCCTCCACGCGGTTTCCAGTGTCCACACTGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359872.6
CDS TCA 90 bp TCCTCCAAGGTCCCCAGGGTCGTCTGCAGGGGCACGTTCACAGTGTaGCTGATGGTTTCAGAGTGGTTTGGCATTGTGTCACAAGTACTC +
Preference number: 5 (lower is better)
Translates to: SSKVPRVVCRGTFTV*LMVSEWFGIVSQVL
Trigger: GAGTACTTGTGACACAATGCCAAACCACTCTGAAACCATCAGTCACACTGTGAACGTGCCCCTGCAGACGACCCTGGGGACCTTGGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR CAA 90 bp TGGGTCTTGGGCCTCAAGGTCTGTTTGGAGGGAGTGCTGGGTGACTCGAGGGGTCAGAGTGGTTTGGCATaGTGTCACAAGTACTCACAT +
Preference number: 5 (lower is better)
Translates to: WVLGLKVCLEGVLGDSRGQSGLA*CHKYSH
Trigger: ATGTGAGTACTTGTGACACAATGCCAAACCACTCTG...ACCCCTCGAGTCACCCAGCACTCCCTCCAAACAGACCTTGAGGCCCAAGACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS TCA 90 bp CCAAGGTCCCCAGGGTCGTCTGCAGGGGCACGTTCACAGTGTGACTaGTGGTTTCAGAGTGGTTTGGCATTGTGTCACAAGTACTCACAT +
Preference number: 5 (lower is better)
Translates to: PRSPGSSAGARSQCD*WFQSGLALCHKYSH
Trigger: ATGTGAGTACTTGTGACACAATGCCAAACCACTCTGAAACCATCAGTCACACTGTGAACGTGCCCCTGCAGACGACCCTGGGGACCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS CCA 90 bp AGTCCGCACTTAAGAGATCTACACTCCAAACACAGAGCAGTTTCTTaGAGTCCTGAGGGCCTGGAGTTGAGGTCGGGAAGAAGGAGGCTG +
Preference number: 5 (lower is better)
Translates to: SPHLRDLHSKHRAVS*SPEGLELRSGRRRL
Trigger: CAGCCTCCTTCTTCCCGACCTCAACTCCAGGCCCTCAGGACTCCAAGAAACTGCTCTGTGTTTGGAGTGTAGATCTCTTAAGTGCGGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579816.1
CDS-3UTR CAA 90 bp CTTGATTGTGCAGTTCTGATTCCAGGGTGGCCTCATGGTGACTTTGGACCTGGATCCTTGTCCTGGGTCTaGGGCCTCAAGGTCTGTTTG +
Preference number: 5 (lower is better)
Translates to: LDCAVLIPGWPHGDFGPGSLSWV*GLKVCL
Trigger: CAAACAGACCTTGAGGCCCAAGACCCAGGACAAGGA...TCCAGGTCCAAAGTCACCATGAGGCCACCCTGGAATCAGAACTGCACAATCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS TCA 90 bp AGAGAACGCAAGGCAAGCATCGCGCCAGATGCTGTGAGTTTATCCTaGGAGCCCAGCCGCACGCTGACAGGGGTGAGTGTTTATATAAAA +
Preference number: 5 (lower is better)
Translates to: RERKASIAPDAVSLS*EPSRTLTGVSVYIK
Trigger: TTTTATATAAACACTCACCCCTGTCAGCGTGCGGCTGGGCTCTCAGGATAAACTCACAGCATCTGGCGCGATGCTTGCCTTGCGTTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359872.6
CDS TCA 90 bp CGCACCACTGCTCAGTTCCGCTGGATGCTCAAGACTCCTGCATTTTaGAAAAGTAGCCAAAGCATGCTGCTGCCTCTCCCACCAAACTGT +
Preference number: 5 (lower is better)
Translates to: RTTAQFRWMLKTPAF*KSSQSMLLPLPPNC
Trigger: ACAGTTTGGTGGGAGAGGCAGCAGCATGCTTTGGCTACTTTTTCAAAATGCAGGAGTCTTGAGCATCCAGCGGAACTGAGCAGTGGTGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579816.1
CDS CCA 90 bp CTGCAGGGGCACGTTCACAGTGTGACTGATGGTTTCAGAGTGGTTTaGCATTGTGTCACAAGTACTCACATTCTCATCGTGGCTCCCTTC +
Preference number: 5 (lower is better)
Translates to: LQGHVHSVTDGFRVV*HCVTSTHILIVAPF
Trigger: GAAGGGAGCCACGATGAGAATGTGAGTACTTGTGACACAATGCCAAACCACTCTGAAACCATCAGTCACACTGTGAACGTGCCCCTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR CAA 90 bp TGTACAAGACAGACGTGGAGGTGGCGCCACAAGAAGTCTGAGCATGCAGGTGCTTGGTTTCAGAGTGGTTaGGCATTGTGTCACAAGTAC +
Preference number: 5 (lower is better)
Translates to: CTRQTWRWRHKKSEHAGAWFQSG*ALCHKY
Trigger: GTACTTGTGACACAATGCCAAACCACTCTGAAACCA...AGCACCTGCATGCTCAGACTTCTTGTGGCGCCACCTCCACGTCTGTCTTGTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR CAA 90 bp CAGCAGTGTGGACACTGGAAACCGCGTGGAGGAGTGTCATGTACAAGACAGACGTGGTTTCAGAGTGGTTaGGCATTGTGTCACAAGTAC +
Preference number: 5 (lower is better)
Translates to: QQCGHWKPRGGVSCTRQTWFQSG*ALCHKY
Trigger: GTACTTGTGACACAATGCCAAACCACTCTGAAACCA...CGTCTGTCTTGTACATGACACTCCTCCACGCGGTTTCCAGTGTCCACACTGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS-3UTR CAA 90 bp TGTACAAGACAGACGTGGAGGTGGCGCCACAAGAAGTCTGAGCATGCAGGTGCTTTTTCCCATGATGTTTaGGACTCCGAATGCCGTTTC +
Preference number: 5 (lower is better)
Translates to: CTRQTWRWRHKKSEHAGAFSHDV*DSECRF
Trigger: GAAACGGCATTCGGAGTCCAAAACATCATGGGAAAA...AGCACCTGCATGCTCAGACTTCTTGTGGCGCCACCTCCACGTCTGTCTTGTACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359872.6
CDS-3UTR CAA 90 bp GTGGACACTGGAAACCGCGTGGAGGAGTGTCATGTACAAGACAGACGTGGAGGTGCAACTGGCTTCAGGTaGATCGAATTTCAGAGAAGA +
Preference number: 5 (lower is better)
Translates to: VDTGNRVEECHVQDRRGGATGFR*IEFQRR
Trigger: TCTTCTCTGAAATTCGATCAACCTGAAGCCAGTTGC...ACCTCCACGTCTGTCTTGTACATGACACTCCTCCACGCGGTTTCCAGTGTCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359872.6
CDS GCA 72 bp CAGCGGCAGCCGCGCGCAGCCCGCGCCAGGGAAGCGTaGGCCCGAAAGGAGCTCCGGTGGCGCGGCATGCCC +
Preference number: 6 (lower is better)
Translates to: QRQPRAARAREA*ARKELRWRGMP
Trigger: GGGCATGCCGCGCCACCGGAGCTCCTTTCGGGCGCACGCTTCCCTGGCGCGGGCTGCGCGCGGCTGCCGCTG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225823.7
CDS TCA 72 bp ACTGGCGGCGCGGCTCGTCGCCCCGCAGCAGCTCGCTaGCAAGCGGGCGCGCGGTGCGGTTGGGCAGCAGCA +
Preference number: 6 (lower is better)
Translates to: TGGAARRPAAAR*QAGARCGWAAA
Trigger: TGCTGCTGCCCAACCGCACCGCGCGCCCGCTTGTCAGCGAGCTGCTGCGGGGCGACGAGCCGCGCCGCCAGT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225823.7
CDS CCA 72 bp CGAACTTGGGCAGCGGCCGCGCGACGCTGGCGCGGCTaGGCTCCGAGCACCTGCTCCTCAGCTCGCTGGCCC +
Preference number: 6 (lower is better)
Translates to: RTWAAAARRWRG*APSTCSSARWP
Trigger: GGGCCAGCGAGCTGAGGAGCAGGTGCTCGGAGCCCAGCCGCGCCAGCGTCGCGCGGCCGCTGCCCAAGTTCG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225823.7
CDS CCA 72 bp GGCCCCAGGCGAACTTGGGCAGCGGCCGCGCGACGCTaGCGCGGCTGGGCTCCGAGCACCTGCTCCTCAGCT +
Preference number: 6 (lower is better)
Translates to: GPRRTWAAAARR*RGWAPSTCSSA
Trigger: AGCTGAGGAGCAGGTGCTCGGAGCCCAGCCGCGCCAGCGTCGCGCGGCCGCTGCCCAAGTTCGCCTGGGGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225823.7
CDS CCA 72 bp AGAGGCGCACCGCGGCTCCTGGCTGGGCGGGCGGGGTaGGTGTGTACGGGGGTGAGTGGTCGCCTTGCCGGC +
Preference number: 6 (lower is better)
Translates to: RGAPRLLAGRAG*VCTGVSGRLAG
Trigger: GCCGGCAAGGCGACCACTCACCCCCGTACACACCCACCCCGCCCGCCCAGCCAGGAGCCGCGGTGCGCCTCT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000225823.7
CDS GCA 72 bp GCCGCCGTGCGCCCGGCACACATGTGCCGCAGCCCGTaGAGTTTAGCGCGGCTCAGCGATGGCCGCCCCCTG +
Preference number: 6 (lower is better)
Translates to: AAVRPAHMCRSP*SLARLSDGRPL
Trigger: CAGGGGGCGGCCATCGCTGAGCCGCGCTAAACTGCACGGGCTGCGGCACATGTGTGCCGGGCGCACGGCGGC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000225823.7
CDS GCA 72 bp GGCGCGGAGGCAGGAAGAGGCGGAAGTCCGCCAGCTTaGGGAACCACTGGCGGCGCGGCTCGTCGCCCCGCA +
Preference number: 6 (lower is better)
Translates to: GAEAGRGGSPPA*GTTGGAARRPA
Trigger: TGCGGGGCGACGAGCCGCGCCGCCAGTGGTTCCGCAAGCTGGCGGACTTCCGCCTCTTCCTGCCTCCGCGCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225823.7
CDS CCA 72 bp TGCCCGGGAGAACCCTCTTTGGGCCCCAGGCGAACTTaGGCAGCGGCCGCGCGACGCTGGCGCGGCTGGGCT +
Preference number: 6 (lower is better)
Translates to: CPGEPSLGPRRT*AAAARRWRGWA
Trigger: AGCCCAGCCGCGCCAGCGTCGCGCGGCCGCTGCCCAAGTTCGCCTGGGGCCCAAAGAGGGTTCTCCCGGGCA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225823.7
CDS CAA 90 bp CTTCCCCGGTTGCCCGGGAGAACCCTCTTTGGGCCCCAGGCGAACTaGGGCAGCGGCCGCGCGACGCTGGCGCGGCTGGGCTCCGAGCAC +
Preference number: 6 (lower is better)
Translates to: LPRLPGRTLFGPQAN*GSGRATLARLGSEH
Trigger: GTGCTCGGAGCCCAGCCGCGCCAGCGTCGCGCGGCCGCTGCCCAAGTTCGCCTGGGGCCCAAAGAGGGTTCTCCCGGGCAACCGGGGAAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000225823.7
CDS CCA 72 bp GGCAGCGCGCGGCGCGGAGAGGCGAGGACCGGTATCTaGAGACTGGGGACGGAAGCGGGGAGCTCAGACCGG +
Preference number: 6 (lower is better)
Translates to: GSARRGEARTGI*RLGTEAGSSDR
Trigger: CCGGTCTGAGCTCCCCGCTTCCGTCCCCAGTCTCCAGATACCGGTCCTCGCCTCTCCGCGCCGCGCGCTGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359872.6
ENST00000583395.1
CDS CAA 90 bp CCCTCGAAGTGGCGCGGAGGCAGGAAGAGGCGGAAGTCCGCCAGCTaGCGGAACCACTGGCGGCGCGGCTCGTCGCCCCGCAGCAGCTCG +
Preference number: 6 (lower is better)
Translates to: PSKWRGGRKRRKSAS*RNHWRRGSSPRSSS
Trigger: CGAGCTGCTGCGGGGCGACGAGCCGCGCCGCCAGTGGTTCCGCAAGCTGGCGGACTTCCGCCTCTTCCTGCCTCCGCGCCACTTCGAGGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225823.7
CDS GCA 72 bp ACCCGCCAACACCTCCCGGGGGTGACCCGGACTCGCTaGTCCGCGCGCCCTTCTCCTCTCGAGACTCCGAGC +
Preference number: 6 (lower is better)
Translates to: TRQHLPGVTRTR*SARPSPLETPS
Trigger: GCTCGGAGTCTCGAGAGGAGAAGGGCGCGCGGAGCAGCGAGTCCGGGTCACCCCCGGGAGGTGTTGGCGGGT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000225823.7
CDS CCA 72 bp TGGAGGGGTCCCACTGGGAGCCGCCTCTCCAGTCCCTaGGTGCTGCGCCCGCCTTCCCTCGTCCTGGACCTC +
Preference number: 6 (lower is better)
Translates to: WRGPTGSRLSSP*VLRPPSLVLDL
Trigger: GAGGTCCAGGACGAGGGAAGGCGGGCGCAGCACCCAGGGACTGGAGAGGCGGCTCCCAGTGGGACCCCTCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225823.7
CDS GCA 72 bp AAGGAGCCCCCAGCCGCCGTGCGCCCGGCACACATGTaGCGCAGCCCGTGCAGTTTAGCGCGGCTCAGCGAT +
Preference number: 6 (lower is better)
Translates to: KEPPAAVRPAHM*RSPCSLARLSD
Trigger: ATCGCTGAGCCGCGCTAAACTGCACGGGCTGCGGCACATGTGTGCCGGGCGCACGGCGGCTGGGGGCTCCTT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000225823.7
CDS GCA 72 bp ATCCTGGGGGATGTCAGGGCGGCCACGCTGATGCACTaGGGTCGGGCGCAGCGGCACAGCCTTCAGAGCCGC +
Preference number: 6 (lower is better)
Translates to: ILGDVRAATLMH*GRAQRHSLQSR
Trigger: GCGGCTCTGAAGGCTGTGCCGCTGCGCCCGACCGCAGTGCATCAGCGTGGCCGCCCTGACATCCCCCAGGAT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359872.6
CDS CAA 90 bp TCCGAGCTCGCGGTGGCCGTGACGCCGGCTAAGCTCCTTCCCCGGTaGCCCGGGAGAACCCTCTTTGGGCCCCAGGCGAACTTGGGCAGC +
Preference number: 6 (lower is better)
Translates to: SELAVAVTPAKLLPR*PGRTLFGPQANLGS
Trigger: GCTGCCCAAGTTCGCCTGGGGCCCAAAGAGGGTTCTCCCGGGCAACCGGGGAAGGAGCTTAGCCGGCGTCACGGCCACCGCGAGCTCGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000225823.7
CDS TCA 72 bp CCTTCTCCTCTCGAGACTCCGAGCTCGCGGTGGCCGTaGCGCCGGCTAAGCTCCTTCCCCGGTTGCCCGGGA +
Preference number: 6 (lower is better)
Translates to: PSPLETPSSRWP*RRLSSFPGCPG
Trigger: TCCCGGGCAACCGGGGAAGGAGCTTAGCCGGCGTCACGGCCACCGCGAGCTCGGAGTCTCGAGAGGAGAAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225823.7
CDS CCA 72 bp GCCCGAGCCAGTGGCCGGCATAGTAGAGGTCCCCCTTaGAGAGGCGCGGGAAGCGCAGCGGGTTGTTGTTGC +
Preference number: 6 (lower is better)
Translates to: ARASGRHSRGPP*RGAGSAAGCCC
Trigger: GCAACAACAACCCGCTGCGCTTCCCGCGCCTCTCCAAGGGGGACCTCTACTATGCCGGCCACTGGCTCGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000225823.7
CDS CCA 72 bp AGGCGGTCCATGAAGGCGGCGCTGATTCCCTCGAAGTaGCGCGGAGGCAGGAAGAGGCGGAAGTCCGCCAGC +
Preference number: 6 (lower is better)
Translates to: RRSMKAALIPSK*RGGRKRRKSAS
Trigger: GCTGGCGGACTTCCGCCTCTTCCTGCCTCCGCGCCACTTCGAGGGAATCAGCGCCGCCTTCATGGACCGCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225823.7
CDS GCA 72 bp TACGCTGGTCCTGGGAGAAGGGCCACTCGGCCACCATaGCTGATCTGGACATCCCCAGGGACCCCACCAGCC +
Preference number: 6 (lower is better)
Translates to: YAGPGRRATRPP*LIWTSPGTPPA
Trigger: GGCTGGTGGGGTCCCTGGGGATGTCCAGATCAGGCATGGTGGCCGAGTGGCCCTTCTCCCAGGACCAGCGTA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000225823.7
CDS CAA 72 bp CCCTTGGAGAGGCGCGGGAAGCGCAGCGGGTTGTTGTaGCACACAGTGACGGCGGGGAAGGGTAACTGGCGG +
Preference number: 6 (lower is better)
Translates to: PLERRGKRSGLL*HTVTAGKGNWR
Trigger: CCGCCAGTTACCCTTCCCCGCCGTCACTGTGTGCAACAACAACCCGCTGCGCTTCCCGCGCCTCTCCAAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225823.7
CDS GCA 72 bp GGAGGCCAGGTGAAGGGCCCAACCCTGGCGCACCACTaGTCAGTTCCGCTGGATGCTCAAGACTCGGAGGAG +
Preference number: 6 (lower is better)
Translates to: GGQVKGPTLAHH*SVPLDAQDSEE
Trigger: CTCCTCCGAGTCTTGAGCATCCAGCGGAACTGAGCAGTGGTGCGCCAGGGTTGGGCCCTTCACCTGGCCTCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448983.1
CDS CCA 72 bp AGCCCACGAAGGCCACTGCCCACAGCACACGCCGGATaGTCAGCGGCCCATACACGAAGATGTGGCGGATGC +
Preference number: 6 (lower is better)
Translates to: SPRRPLPTAHAG*SAAHTRRCGGC
Trigger: GCATCCGCCACATCTTCGTGTATGGGCCGCTGACCATCCGGCGTGTGCTGTGGGCAGTGGCCTTCGTGGGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359872.6
CDS CAA 72 bp TCCCCCTTGGAGAGGCGCGGGAAGCGCAGCGGGTTGTaGTTGCACACAGTGACGGCGGGGAAGGGTAACTGG +
Preference number: 6 (lower is better)
Translates to: SPLERRGKRSGL*LHTVTAGKGNW
Trigger: CCAGTTACCCTTCCCCGCCGTCACTGTGTGCAACAACAACCCGCTGCGCTTCCCGCGCCTCTCCAAGGGGGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000225823.7
CDS CAA 72 bp AGGTCCCCCTTGGAGAGGCGCGGGAAGCGCAGCGGGTaGTTGTTGCACACAGTGACGGCGGGGAAGGGTAAC +
Preference number: 6 (lower is better)
Translates to: RSPLERRGKRSG*LLHTVTAGKGN
Trigger: GTTACCCTTCCCCGCCGTCACTGTGTGCAACAACAACCCGCTGCGCTTCCCGCGCCTCTCCAAGGGGGACCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000225823.7
CDS TCA 72 bp TCCACTCGCGGTGCACCCGCGTGTGTGACGGGAAGCTaGGCCAGTAGAGCAAGCGGTTCGAGGACCAGGACA +
Preference number: 6 (lower is better)
Translates to: STRGAPACVTGS*ASRASGSRTRT
Trigger: TGTCCTGGTCCTCGAACCGCTTGCTCTACTGGCTCAGCTTCCCGTCACACACGCGGGTGCACCGCGAGTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225823.7
CDS CCA 72 bp TTGTTGTTGCACACAGTGACGGCGGGGAAGGGTAACTaGCGGCTCCACTCGCGGTGCACCCGCGTGTGTGAC +
Preference number: 6 (lower is better)
Translates to: LLLHTVTAGKGN*RLHSRCTRVCD
Trigger: GTCACACACGCGGGTGCACCGCGAGTGGAGCCGCCAGTTACCCTTCCCCGCCGTCACTGTGTGCAACAACAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225823.7
CDS CCA 72 bp AGCCGCCGCCGCTCGGTTCCTTTTCCCATGATGTTTTaGACTCCGAATGCCGTTTCTCGCCGCCGGCCTCCG +
Preference number: 6 (lower is better)
Translates to: SRRRSVPFPMMF*TPNAVSRRRPP
Trigger: CGGAGGCCGGCGGCGAGAAACGGCATTCGGAGTCCAAAACATCATGGGAAAAGGAACCGAGCGGCGGCGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359872.6
CDS CCA 72 bp AGGGCCCAACCCTGGCGCACCACTGCTCAGTTCCGCTaGATGCTCAAGACTCGGAGGAGAAGTTGTGCGGCC +
Preference number: 6 (lower is better)
Translates to: RAQPWRTTAQFR*MLKTRRRSCAA
Trigger: GGCCGCACAACTTCTCCTCCGAGTCTTGAGCATCCAGCGGAACTGAGCAGTGGTGCGCCAGGGTTGGGCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448983.1
CDS CAA 72 bp GAGCCGCCGCCGCTCGGTTCCTTTTCCCATGATGTTTaGGACTCCGAATGCCGTTTCTCGCCGCCGGCCTCC +
Preference number: 6 (lower is better)
Translates to: EPPPLGSFSHDV*DSECRFSPPAS
Trigger: GGAGGCCGGCGGCGAGAAACGGCATTCGGAGTCCAAAACATCATGGGAAAAGGAACCGAGCGGCGGCGGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359872.6
CDS CAA 90 bp CAGCCTTCAGAGCCGCCGCCGCTCGGTTCCTTTTCCCATGATGTTTaGGACTCCGAATGCCGTTTCTCGCCGCCGGCCTCCGTCCCTCCT +
Preference number: 6 (lower is better)
Translates to: QPSEPPPLGSFSHDV*DSECRFSPPASVPP
Trigger: AGGAGGGACGGAGGCCGGCGGCGAGAAACGGCATTCGGAGTCCAAAACATCATGGGAAAAGGAACCGAGCGGCGGCGGCTCTGAAGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359872.6
CDS GCA 72 bp GGAGGCCAGGTGAAGGGCCCAACCCTGGCGCACCACTaGTCAGTTCCGCTGGATGCTCAAGACTCCTGCATT +
Preference number: 6 (lower is better)
Translates to: GGQVKGPTLAHH*SVPLDAQDSCI
Trigger: AATGCAGGAGTCTTGAGCATCCAGCGGAACTGAGCAGTGGTGCGCCAGGGTTGGGCCCTTCACCTGGCCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579816.1
CDS TCA 72 bp GCCTTCAGAGCCGCCGCCGCTCGGTTCCTTTTCCCATaGTGTTTTGGACTCCGAATGCCGTTTCTCGCCGCC +
Preference number: 6 (lower is better)
Translates to: AFRAAAARFLFP*CFGLRMPFLAA
Trigger: GGCGGCGAGAAACGGCATTCGGAGTCCAAAACATCATGGGAAAAGGAACCGAGCGGCGGCGGCTCTGAAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359872.6
CDS GCA 72 bp CCTGGGTCTTGGGCCTCAAGGTCTGTTTGGAGGGAGTaGTGGGTGACTCGAGGGGTGTCAGCAGGCAATCTC +
Preference number: 6 (lower is better)
Translates to: PGSWASRSVWRE*WVTRGVSAGNL
Trigger: GAGATTGCCTGCTGACACCCCTCGAGTCACCCAGCACTCCCTCCAAACAGACCTTGAGGCCCAAGACCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS CCA 72 bp GGGTCTTGGGCCTCAAGGTCTGTTTGGAGGGAGTGCTaGGTGACTCGAGGGGTGTCAGCAGGCAATCTCCTC +
Preference number: 6 (lower is better)
Translates to: GSWASRSVWREC*VTRGVSAGNLL
Trigger: GAGGAGATTGCCTGCTGACACCCCTCGAGTCACCCAGCACTCCCTCCAAACAGACCTTGAGGCCCAAGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS CAA 72 bp CTAGAAGGTTGCAGGCTGCCCTCACTGGGGCTTTCCTaGAGGTCCATCGGGACCCCGTGCAGTTCCGCAACT +
Preference number: 6 (lower is better)
Translates to: LEGCRLPSLGLS*RSIGTPCSSAT
Trigger: AGTTGCGGAACTGCACGGGGTCCCGATGGACCTCAAGGAAAGCCCCAGTGAGGGCAGCCTGCAACCTTCTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359872.6
CDS CAA 90 bp ATCTGGATGCTAGAAGGTTGCAGGCTGCCCTCACTGGGGCTTTCCTaGAGGTCCATCGGGACCCCGTGCAGTTCCGCAACTGGCTTCAGG +
Preference number: 6 (lower is better)
Translates to: IWMLEGCRLPSLGLS*RSIGTPCSSATGFR
Trigger: CCTGAAGCCAGTTGCGGAACTGCACGGGGTCCCGATGGACCTCAAGGAAAGCCCCAGTGAGGGCAGCCTGCAACCTTCTAGCATCCAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359872.6
CDS GCA 72 bp CTCGGTTCCTTTTCCCATGATGTTTTGGACTCCGAATaGCGTTTCTCGCCGCCGGCCTCCGTCCCTCCTCTC +
Preference number: 6 (lower is better)
Translates to: LGSFSHDVLDSE*RFSPPASVPPL
Trigger: GAGAGGAGGGACGGAGGCCGGCGGCGAGAAACGGCATTCGGAGTCCAAAACATCATGGGAAAAGGAACCGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359872.6
CDS GCA 72 bp TCAGGGGAGAGAACGCAAGGCAAGCATCGCGCCAGATaGTGTGAGTTTATCCTGAGAGCCCAGCCGCACGCT +
Preference number: 6 (lower is better)
Translates to: SGERTQGKHRAR*CEFILRAQPHA
Trigger: AGCGTGCGGCTGGGCTCTCAGGATAAACTCACAGCATCTGGCGCGATGCTTGCCTTGCGTTCTCTCCCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359872.6
CDS CCA 72 bp GTTCCTTGTCCTGGGTCTTGGGCCTCAAGGTCTGTTTaGAGGGAGTGCTGGGTGACTCGAGGGGTGTCAGCA +
Preference number: 6 (lower is better)
Translates to: VPCPGSWASRSV*RECWVTRGVSA
Trigger: TGCTGACACCCCTCGAGTCACCCAGCACTCCCTCCAAACAGACCTTGAGGCCCAAGACCCAGGACAAGGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS TCA 72 bp AAGGCAAGCATCGCGCCAGATGCTGTGAGTTTATCCTaGGAGCCCAGCCGCACGCTGACAGGGGTGAGTGTT +
Preference number: 6 (lower is better)
Translates to: KASIAPDAVSLS*EPSRTLTGVSV
Trigger: AACACTCACCCCTGTCAGCGTGCGGCTGGGCTCTCAGGATAAACTCACAGCATCTGGCGCGATGCTTGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359872.6
CDS CAA 90 bp TTGAGGTCCATCGGGACCCCGTGCAGTTCCGCAACTGGCTTCAGGTaGATCGAATTTCAGAGAAGAGCTCCCAGTCCTCGGGCTCTGCTT +
Preference number: 6 (lower is better)
Translates to: LRSIGTPCSSATGFR*IEFQRRAPSPRALL
Trigger: AAGCAGAGCCCGAGGACTGGGAGCTCTTCTCTGAAATTCGATCAACCTGAAGCCAGTTGCGGAACTGCACGGGGTCCCGATGGACCTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359872.6
CDS TCA 72 bp AGAAGAGCTCCCAGTCCTCGGGCTCTGCTTAAACCTTaGCGTTCAGGGGAGAGAACGCAAGGCAAGCATCGC +
Preference number: 6 (lower is better)
Translates to: RRAPSPRALLKP*RSGERTQGKHR
Trigger: GCGATGCTTGCCTTGCGTTCTCTCCCCTGAACGTCAAGGTTTAAGCAGAGCCCGAGGACTGGGAGCTCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359872.6
CDS GCA 72 bp CACTTCCCATATTTTGTAAACACGGAGGAGAAGTTGTaGGGCCCGCAGAGCTCGCCGCGGTACTTGCAGGAG +
Preference number: 6 (lower is better)
Translates to: HFPYFVNTEEKL*GPQSSPRYLQE
Trigger: CTCCTGCAAGTACCGCGGCGAGCTCTGCGGGCCGCACAACTTCTCCTCCGTGTTTACAAAATATGGGAAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225823.7
CDS CCA 72 bp GAACCGGAAGCCATTCAGGTTACAGAGGGTCACAGCTaGGAAGACCAGGCTTTGAGCCACCACTTCGTCCAC +
Preference number: 6 (lower is better)
Translates to: EPEAIQVTEGHS*EDQALSHHFVH
Trigger: GTGGACGAAGTGGTGGCTCAAAGCCTGGTCTTCCCAGCTGTGACCCTCTGTAACCTGAATGGCTTCCGGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359872.6
CDS CAA 72 bp ATCGGGACCCCGTGCAGTTCCGCAACTGGCTTCAGGTaGATCGAATTTCAGAGAAGAGCTCCCAGTCCTCGG +
Preference number: 6 (lower is better)
Translates to: IGTPCSSATGFR*IEFQRRAPSPR
Trigger: CCGAGGACTGGGAGCTCTTCTCTGAAATTCGATCAACCTGAAGCCAGTTGCGGAACTGCACGGGGTCCCGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359872.6
CDS TCA 72 bp GTCCCCAGGGTCGTCTGCAGGGGCACGTTCACAGTGTaGCTGATGGTTTCAGAGTGGTTTGGCATTGTGTCA +
Preference number: 6 (lower is better)
Translates to: VPRVVCRGTFTV*LMVSEWFGIVS
Trigger: TGACACAATGCCAAACCACTCTGAAACCATCAGTCACACTGTGAACGTGCCCCTGCAGACGACCCTGGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS TCA 72 bp AGGTTACAGAGGGTCACAGCTGGGAAGACCAGGCTTTaGGCCACCACTTCGTCCACCTTAGTGACATGCTGG +
Preference number: 6 (lower is better)
Translates to: RLQRVTAGKTRL*ATTSSTLVTCW
Trigger: CCAGCATGTCACTAAGGTGGACGAAGTGGTGGCTCAAAGCCTGGTCTTCCCAGCTGTGACCCTCTGTAACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359872.6
CDS GCA 72 bp TCACTGGGGCTTTCCTTGAGGTCCATCGGGACCCCGTaGAGTTCCGCAACTGGCTTCAGGTTGATCGAATTT +
Preference number: 6 (lower is better)
Translates to: SLGLSLRSIGTP*SSATGFRLIEF
Trigger: AAATTCGATCAACCTGAAGCCAGTTGCGGAACTGCACGGGGTCCCGATGGACCTCAAGGAAAGCCCCAGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359872.6
CDS CCA 72 bp CTTGAGGTCCATCGGGACCCCGTGCAGTTCCGCAACTaGCTTCAGGTTGATCGAATTTCAGAGAAGAGCTCC +
Preference number: 6 (lower is better)
Translates to: LEVHRDPVQFRN*LQVDRISEKSS
Trigger: GGAGCTCTTCTCTGAAATTCGATCAACCTGAAGCCAGTTGCGGAACTGCACGGGGTCCCGATGGACCTCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359872.6
CDS GCA 72 bp GCTCAGACCGGGATCCATTCTCTCCTCGCCTCCCAATaGCACCTGGTTACAACTGGAAGATCCAGACTTCAA +
Preference number: 6 (lower is better)
Translates to: AQTGIHSLLASQ*HLVTTGRSRLQ
Trigger: TTGAAGTCTGGATCTTCCAGTTGTAACCAGGTGGCATTGGGAGGCGAGGAGAGAATGGATCCCGGTCTGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583395.1
CDS CAA 90 bp GAAGCCATTCAGGTTACAGAGGGTCACAGCTGGGAAGACCAGGCTTaGAGCCACCACTTCGTCCACCTTAGTGACATGCTGGTAGGAGAA +
Preference number: 6 (lower is better)
Translates to: EAIQVTEGHSWEDQA*SHHFVHLSDMLVGE
Trigger: TTCTCCTACCAGCATGTCACTAAGGTGGACGAAGTGGTGGCTCAAAGCCTGGTCTTCCCAGCTGTGACCCTCTGTAACCTGAATGGCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359872.6
CDS GCA 72 bp TCGAATTTCAGAGAAGAGCTCCCAGTCCTCGGGCTCTaGTTAAACCTTGACGTTCAGGGGAGAGAACGCAAG +
Preference number: 6 (lower is better)
Translates to: SNFREELPVLGL*LNLDVQGRERK
Trigger: CTTGCGTTCTCTCCCCTGAACGTCAAGGTTTAAGCAGAGCCCGAGGACTGGGAGCTCTTCTCTGAAATTCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359872.6
CDS GCA 72 bp CCCAACCCTGGCGCACCACTGCTCAGTTCCGCTGGATaGTCAAGACTCCTGCATTTTGAAAAAGTAGCCAAA +
Preference number: 6 (lower is better)
Translates to: PNPGAPLLSSAG*SRLLHFEKVAK
Trigger: TTTGGCTACTTTTTCAAAATGCAGGAGTCTTGAGCATCCAGCGGAACTGAGCAGTGGTGCGCCAGGGTTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579816.1
CDS TCA 72 bp GCTCAGTTCCGCTGGATGCTCAAGACTCCTGCATTTTaGAAAAGTAGCCAAAGCATGCTGCTGCCTCTCCCA +
Preference number: 6 (lower is better)
Translates to: AQFRWMLKTPAF*KSSQSMLLPLP
Trigger: TGGGAGAGGCAGCAGCATGCTTTGGCTACTTTTTCAAAATGCAGGAGTCTTGAGCATCCAGCGGAACTGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579816.1
CDS CCA 72 bp TTTGGCATTGTGTCACAAGTACTCACATTCTCATCGTaGCTCCCTTCGTCCTCCTCTTTGCCAAGCAGGTCT +
Preference number: 6 (lower is better)
Translates to: FGIVSQVLTFSS*LPSSSSLPSRS
Trigger: AGACCTGCTTGGCAAAGAGGAGGACGAAGGGAGCCACGATGAGAATGTGAGTACTTGTGACACAATGCCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS CCA 72 bp TTAAGAGATCTACACTCCAAACACAGAGCAGTTTCTTaGAGTCCTGAGGGCCTGGAGTTGAGGTCGGGAAGA +
Preference number: 6 (lower is better)
Translates to: LRDLHSKHRAVS*SPEGLELRSGR
Trigger: TCTTCCCGACCTCAACTCCAGGCCCTCAGGACTCCAAGAAACTGCTCTGTGTTTGGAGTGTAGATCTCTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579816.1
CDS TCA 72 bp AAACAGGAACAGAGGCTGCCCAACTCCCTTCTGTACTaGGCTCTGTTTTCCTGGTTTGCCATCTGTGTAACA +
Preference number: 6 (lower is better)
Translates to: KQEQRLPNSLLY*ALFSWFAICVT
Trigger: TGTTACACAGATGGCAAACCAGGAAAACAGAGCTCAGTACAGAAGGGAGTTGGGCAGCCTCTGTTCCTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583395.1
CDS CCA 72 bp CTGCCTCTCCCACCAAACTGTCTACAGCTTCAGTGTTaGTTTTCTGGGAGTTTCCTCACAAGTTCTCCTAGA +
Preference number: 6 (lower is better)
Translates to: LPLPPNCLQLQC*FSGSFLTSSPR
Trigger: TCTAGGAGAACTTGTGAGGAAACTCCCAGAAAACCAACACTGAAGCTGTAGACAGTTTGGTGGGAGAGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579816.1
CDS GCA 72 bp CTCCTGCATTTTGAAAAAGTAGCCAAAGCATGCTGCTaGCTCTCCCACCAAACTGTCTACAGCTTCAGTGTT +
Preference number: 6 (lower is better)
Translates to: LLHFEKVAKACC*LSHQTVYSFSV
Trigger: AACACTGAAGCTGTAGACAGTTTGGTGGGAGAGGCAGCAGCATGCTTTGGCTACTTTTTCAAAATGCAGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579816.1
CDS GCA 72 bp AGACTCCTGCATTTTGAAAAAGTAGCCAAAGCATGCTaGTGCCTCTCCCACCAAACTGTCTACAGCTTCAGT +
Preference number: 6 (lower is better)
Translates to: RLLHFEKVAKAC*CLSHQTVYSFS
Trigger: ACTGAAGCTGTAGACAGTTTGGTGGGAGAGGCAGCAGCATGCTTTGGCTACTTTTTCAAAATGCAGGAGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579816.1
CDS CCA 72 bp TTCTCTCCTCGCCTCCCAATGCCACCTGGTTACAACTaGAAGATCCAGACTTCAAACCATGGTCTGTTTAAT +
Preference number: 6 (lower is better)
Translates to: FSPRLPMPPGYN*KIQTSNHGLFN
Trigger: ATTAAACAGACCATGGTTTGAAGTCTGGATCTTCCAGTTGTAACCAGGTGGCATTGGGAGGCGAGGAGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583395.1
CDS CCA 72 bp CACGTTCACAGTGTGACTGATGGTTTCAGAGTGGTTTaGCATTGTGTCACAAGTACTCACATTCTCATCGTG +
Preference number: 6 (lower is better)
Translates to: HVHSVTDGFRVV*HCVTSTHILIV
Trigger: CACGATGAGAATGTGAGTACTTGTGACACAATGCCAAACCACTCTGAAACCATCAGTCACACTGTGAACGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6
CDS TCA 72 bp ATTGTAAGGATACTAGCACCAATGAACAATCCCATCTaGCCACCAATATCACCAAGTAAGGCAGCAACTTCA +
Preference number: 6 (lower is better)
Translates to: IVRILAPMNNPI*PPISPSKAATS
Trigger: TGAAGTTGCTGCCTTACTTGGTGATATTGGTGGTCAGATGGGATTGTTCATTGGTGCTAGTATCCTTACAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225823.7
ENST00000359872.6