RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ASIC1 (Homo sapiens)

Ensembl gene IDs: ENSG00000110881

Ensembl transcript IDs: ENST00000228468.8, ENST00000447966.7, ENST00000453327.7, ENST00000548350.1, ENST00000549792.1, ENST00000550558.5, ENST00000551199.1, ENST00000552438.5, ENST00000552633.2

Found 634 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGGCCACTGACTGAGGACCTCAGCTTCTGCCTGTCAGCATCCCACTaGCCCAACTTCAGGAGTCGCCAATCCCCAGCTCCCTTCTGTCTC +
Preference number: 1 (lower is better)
Translates to: RPLTEDLSFCLSASH*PNFRSRQSPAPFCL
Trigger: GAGACAGAAGGGAGCTGGGGATTGGCGACTCCTGAAGTTGGGGCAGTGGGATGCTGACAGGCAGAAGCTGAGGTCCTCAGTCAGTGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
3UTR TCA 90 bp AGGGCTGCCTCTTGGGATTTCTCTCCAGCAGCTGTGGGGTGGGGGTaGACTTATAGGTATCAGGATGTAGCCTACAGCACCAGGGCCGCA +
Preference number: 1 (lower is better)
Translates to: RAASWDFSPAAVGWG*TYRYQDVAYSTRAA
Trigger: TGCGGCCCTGGTGCTGTAGGCTACATCCTGATACCTATAAGTTCACCCCCACCCCACAGCTGCTGGAGAGAAATCCCAAGAGGCAGCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
3UTR GCA 90 bp TCTATGGTCAAGACTCCTTCCTTACCACAGACAAGAGGAAAGATCTaGCCCGGAGTGTGGGGAGTCCCCAGGGCAGATGTGAGGAGGCAG +
Preference number: 1 (lower is better)
Translates to: SMVKTPSLPQTRGKI*PGVWGVPRADVRRQ
Trigger: CTGCCTCCTCACATCTGCCCTGGGGACTCCCCACACTCCGGGGCAGATCTTTCCTCTTGTCTGTGGTAAGGAAGGAGTCTTGACCATAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000453327.7
ENST00000550558.5
ENST00000552438.5
3UTR GCA 90 bp CCACTGAGACAGTGCAAAGGTTACAATGCGCGTGTCGTCTCCTTGTaGTTCTCAGAGGGATGTGTGTACACAGTACAGACACCAGGGGAG +
Preference number: 1 (lower is better)
Translates to: PLRQCKGYNARVVSL*FSEGCVYTVQTPGE
Trigger: CTCCCCTGGTGTCTGTACTGTGTACACACATCCCTCTGAGAAGCACAAGGAGACGACACGCGCATTGTAACCTTTGCACTGTCTCAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
ENST00000552633.2
3UTR CCA 90 bp GCATTCAGAGACCAGGGAGGGAGTAGAAACATAGAAGGTGGAACTTaGGGTGGGAGAATGGTTCTCAGAGACAAGAGGGGATGGGGTGGA +
Preference number: 1 (lower is better)
Translates to: AFRDQGGSRNIEGGT*GGRMVLRDKRGWGG
Trigger: TCCACCCCATCCCCTCTTGTCTCTGAGAACCATTCTCCCACCCCAAGTTCCACCTTCTATGTTTCTACTCCCTCCCTGGTCTCTGAATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
3UTR GCA 90 bp GGCAGAGCTTGTGATTCACAGCTTCCTTTGTCGCCACTGAGACAGTaGAAAGGTTACAATGCGCGTGTCGTCTCCTTGTGCTTCTCAGAG +
Preference number: 1 (lower is better)
Translates to: GRACDSQLPLSPLRQ*KGYNARVVSLCFSE
Trigger: CTCTGAGAAGCACAAGGAGACGACACGCGCATTGTAACCTTTGCACTGTCTCAGTGGCGACAAAGGAAGCTGTGAATCACAAGCTCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
3UTR TCA 90 bp CAGAAAGAGGCAGAGCTTGTGATTCACAGCTTCCTTTGTCGCCACTaGGACAGTGCAAAGGTTACAATGCGCGTGTCGTCTCCTTGTGCT +
Preference number: 1 (lower is better)
Translates to: QKEAELVIHSFLCRH*DSAKVTMRVSSPCA
Trigger: AGCACAAGGAGACGACACGCGCATTGTAACCTTTGCACTGTCTCAGTGGCGACAAAGGAAGCTGTGAATCACAAGCTCTGCCTCTTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
3UTR GCA 90 bp TTCACAGCTTCCTTTGTCGCCACTGAGACAGTGCAAAGGTTACAATaGGCGTGTCGTCTCCTTGTGCTTCTCAGAGGGATGTGTGTACAC +
Preference number: 1 (lower is better)
Translates to: FTASFVATETVQRLQ*ACRLLVLLRGMCVH
Trigger: GTGTACACACATCCCTCTGAGAAGCACAAGGAGACGACACGCGCATTGTAACCTTTGCACTGTCTCAGTGGCGACAAAGGAAGCTGTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
3UTR CCA 90 bp TCCCCTATCCAATGCACACTTTTTGGCCTCATTCCTGCTTCCCTCTaGGGAGGTATGATCTCTGAGGAAACTCTTAGGAACCAAGAGATT +
Preference number: 1 (lower is better)
Translates to: SPIQCTLFGLIPASL*GGMISEETLRNQEI
Trigger: AATCTCTTGGTTCCTAAGAGTTTCCTCAGAGATCATACCTCCCCAGAGGGAAGCAGGAATGAGGCCAAAAAGTGTGCATTGGATAGGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
3UTR TCA 90 bp AATGCACACTTTTTGGCCTCATTCCTGCTTCCCTCTGGGGAGGTATaGTCTCTGAGGAAACTCTTAGGAACCAAGAGATTCCAAAGATCC +
Preference number: 1 (lower is better)
Translates to: NAHFLASFLLPSGEV*SLRKLLGTKRFQRS
Trigger: GGATCTTTGGAATCTCTTGGTTCCTAAGAGTTTCCTCAGAGATCATACCTCCCCAGAGGGAAGCAGGAATGAGGCCAAAAAGTGTGCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
3UTR-3UTR CCA 90 bp GGACGTGGCCCTCTACAAGGGCCTCCGGGAGAGGGACCAGTGAGGTTAGGCACTCCCCATCTAGGCCTTTaGTTCAGCGGCCTGCGGGGC +
Preference number: 2 (lower is better)
Translates to: GRGPLQGPPGEGPVRLGTPHLGL*FSGLRG
Trigger: GCCCCGCAGGCCGCTGAACCAAAGGCCTAGATGGGG...AGTGCCTAACCTCACTGGTCCCTCTCCCGGAGGCCCTTGTAGAGGGCCACGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
3UTR-3UTR CCA 90 bp GGACGTGGCCCTCTACAAGGGCCTCCGGGAGAGGGACCAGTGAGGTTAGGCACTAGACAGAATTCAGGCTaGGAGCTAGGGGAGGCAGCA +
Preference number: 2 (lower is better)
Translates to: GRGPLQGPPGEGPVRLGTRQNSG*ELGEAA
Trigger: TGCTGCCTCCCCTAGCTCCCAGCCTGAATTCTGTCT...AGTGCCTAACCTCACTGGTCCCTCTCCCGGAGGCCCTTGTAGAGGGCCACGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
3UTR CAA 90 bp ACGTCGTCCAGGCTGAGGGCCACGCCCTTGTCCGCACTGCTCCTTTaGGCCTCCTTCTGGCATTTTCCTCGTCGGCACAGCTTGTGCTTA +
Preference number: 2 (lower is better)
Translates to: TSSRLRATPLSALLL*ASFWHFPRRHSLCL
Trigger: TAAGCACAAGCTGTGCCGACGAGGAAAATGCCAGAAGGAGGCCAAAAGGAGCAGTGCGGACAAGGGCGTGGCCCTCAGCCTGGACGACGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550558.5
3UTR-3UTR TCA 90 bp GGACGTGGCCCTCTACAAGGGCCTCCGGGAGAGGGACCAGTGAGGTTAGGCACTGCTGTGGGGTGGGGGTaGACTTATAGGTATCAGGAT +
Preference number: 2 (lower is better)
Translates to: GRGPLQGPPGEGPVRLGTAVGWG*TYRYQD
Trigger: ATCCTGATACCTATAAGTTCACCCCCACCCCACAGC...AGTGCCTAACCTCACTGGTCCCTCTCCCGGAGGCCCTTGTAGAGGGCCACGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
3UTR-3UTR GCA 90 bp CTATCTCTACAGCAACCCCTTCCCTGGGGATGCCACTGTCAGCTGGGCAGAGGGCTGTCAGCATCCCACTaGCCCAACTTCAGGAGTCGC +
Preference number: 2 (lower is better)
Translates to: LSLQQPLPWGCHCQLGRGLSASH*PNFRSR
Trigger: GCGACTCCTGAAGTTGGGGCAGTGGGATGCTGACAG...CCCTCTGCCCAGCTGACAGTGGCATCCCCAGGGAAGGGGTTGCTGTAGAGATAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
3UTR-3UTR CCA 90 bp GGCTATCTCTACAGCAACCCCTTCCCTGGGGATGCCACTGTCAGCTGGGCAGAGCCTTCCACCCCTCACTaGGAAGGGCCTTTGGTGACT +
Preference number: 2 (lower is better)
Translates to: GYLYSNPFPGDATVSWAEPSTPH*EGPLVT
Trigger: AGTCACCAAAGGCCCTTCCCAGTGAGGGGTGGAAGG...CTCTGCCCAGCTGACAGTGGCATCCCCAGGGAAGGGGTTGCTGTAGAGATAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
3UTR-3UTR CCA 90 bp GGCAGCGTATGTCATCCCGGCAGGGTGGCCCCGAAGGCTCTCGCACGGGTTGTGAGAGAGAGGACTCTATaGTCAAGACTCCTTCCTTAC +
Preference number: 2 (lower is better)
Translates to: GSVCHPGRVAPKALARVVRERTL*SRLLPY
Trigger: GTAAGGAAGGAGTCTTGACCATAGAGTCCTCTCTCT...CACAACCCGTGCGAGAGCCTTCGGGGCCACCCTGCCGGGATGACATACGCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550558.5
3UTR-3UTR CCA 90 bp CTATCTCTACAGCAACCCCTTCCCTGGGGATGCCACTGTCAGCTGGGCAGAGGGAGACAGAATTCAGGCTaGGAGCTAGGGGAGGCAGCA +
Preference number: 2 (lower is better)
Translates to: LSLQQPLPWGCHCQLGRGRQNSG*ELGEAA
Trigger: TGCTGCCTCCCCTAGCTCCCAGCCTGAATTCTGTCT...CCCTCTGCCCAGCTGACAGTGGCATCCCCAGGGAAGGGGTTGCTGTAGAGATAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
3UTR-3UTR CCA 90 bp GGACGTGGCCCTCTACAAGGGCCTCCGGGAGAGGGACCAGTGAGGTTAGGCACTAGGGCCTTTGGTGACTaGTGGCAGCAGAATGTAGAT +
Preference number: 2 (lower is better)
Translates to: GRGPLQGPPGEGPVRLGTRAFGD*WQQNVD
Trigger: ATCTACATTCTGCTGCCACCAGTCACCAAAGGCCCT...AGTGCCTAACCTCACTGGTCCCTCTCCCGGAGGCCCTTGTAGAGGGCCACGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
3UTR-3UTR TCA 90 bp GTGTCGTCTCCTTGTGCTTCTCAGAGGGATGTGTGTACACAGTACAGACACCAGGAGAGAGGGGCAGCCTaGGGTCCCTTGCCCCGTTCT +
Preference number: 2 (lower is better)
Translates to: VSSPCASQRDVCTQYRHQERGAA*GPLPRS
Trigger: AGAACGGGGCAAGGGACCTCAGGCTGCCCCTCTCTC...CTGGTGTCTGTACTGTGTACACACATCCCTCTGAGAAGCACAAGGAGACGACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
3UTR-3UTR CCA 90 bp GCTTCCTTTGTCGCCACTGAGACAGTGCAAAGGTTACAATGCGCGTGTCGTCTCATCTGCCCCGGAGTGTaGGGAGTCCCCAGGGCAGAT +
Preference number: 2 (lower is better)
Translates to: ASFVATETVQRLQCACRLICPGV*GVPRAD
Trigger: ATCTGCCCTGGGGACTCCCCACACTCCGGGGCAGAT...GAGACGACACGCGCATTGTAACCTTTGCACTGTCTCAGTGGCGACAAAGGAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
3UTR-3UTR CCA 90 bp GGACGTGGCCCTCTACAAGGGCCTCCGGGAGAGGGACCAGTGAGGTTAGGCACTATAGAAGGTGGAACTTaGGGTGGGAGAATGGTTCTC +
Preference number: 2 (lower is better)
Translates to: GRGPLQGPPGEGPVRLGTIEGGT*GGRMVL
Trigger: GAGAACCATTCTCCCACCCCAAGTTCCACCTTCTAT...AGTGCCTAACCTCACTGGTCCCTCTCCCGGAGGCCCTTGTAGAGGGCCACGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
3UTR-3UTR GCA 90 bp CTATCTCTACAGCAACCCCTTCCCTGGGGATGCCACTGTCAGCTGGGCAGAGGGGTGCAAAGGTTACAATaGGCGTGTCGTCTCCTTGTG +
Preference number: 2 (lower is better)
Translates to: LSLQQPLPWGCHCQLGRGVQRLQ*ACRLLV
Trigger: CACAAGGAGACGACACGCGCATTGTAACCTTTGCAC...CCCTCTGCCCAGCTGACAGTGGCATCCCCAGGGAAGGGGTTGCTGTAGAGATAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
3UTR-3UTR CCA 90 bp AAAGGTTACAATGCGCGTGTCGTCTCCTTGTGCTTCTCAGAGGGATGTGTGTACCCCCATCTAGGCCTTTaGTTCAGCGGCCTGCGGGGC +
Preference number: 2 (lower is better)
Translates to: KGYNARVVSLCFSEGCVYPHLGL*FSGLRG
Trigger: GCCCCGCAGGCCGCTGAACCAAAGGCCTAGATGGGG...GTACACACATCCCTCTGAGAAGCACAAGGAGACGACACGCGCATTGTAACCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
ENST00000552633.2
3UTR-3UTR CCA 90 bp ACTCTATGGTCAAGACTCCTTCCTTACCACAGACAAGAGGAAAGATCTGCCCCGCCCCATCTAGGCCTTTaGTTCAGCGGCCTGCGGGGC +
Preference number: 2 (lower is better)
Translates to: TLWSRLLPYHRQEERSAPPHLGL*FSGLRG
Trigger: GCCCCGCAGGCCGCTGAACCAAAGGCCTAGATGGGG...CGGGGCAGATCTTTCCTCTTGTCTGTGGTAAGGAAGGAGTCTTGACCATAGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000453327.7
ENST00000550558.5
ENST00000552438.5
3UTR-3UTR CCA 90 bp AGTGCAAAGGTTACAATGCGCGTGTCGTCTCCTTGTGCTTCTCAGAGGGATGTGATCTGCCCCGGAGTGTaGGGAGTCCCCAGGGCAGAT +
Preference number: 2 (lower is better)
Translates to: SAKVTMRVSSPCASQRDVICPGV*GVPRAD
Trigger: ATCTGCCCTGGGGACTCCCCACACTCCGGGGCAGAT...CACATCCCTCTGAGAAGCACAAGGAGACGACACGCGCATTGTAACCTTTGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
ENST00000552633.2
3UTR-3UTR TCA 90 bp GCTTCCTTTGTCGCCACTGAGACAGTGCAAAGGTTACAATGCGCGTGTCGTCTCGGGAAGGGCCTTTGGTaGCTGGTGGCAGCAGAATGT +
Preference number: 2 (lower is better)
Translates to: ASFVATETVQRLQCACRLGKGLW*LVAAEC
Trigger: ACATTCTGCTGCCACCAGTCACCAAAGGCCCTTCCC...GAGACGACACGCGCATTGTAACCTTTGCACTGTCTCAGTGGCGACAAAGGAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
3UTR-3UTR TCA 90 bp ATAAGAAAATTTATGGACGTGGCCCTCTACAAGGGCCTCCGGGAGAGGGACCAGGGGAAGGGCCTTTGGTaGCTGGTGGCAGCAGAATGT +
Preference number: 2 (lower is better)
Translates to: IRKFMDVALYKGLRERDQGKGLW*LVAAEC
Trigger: ACATTCTGCTGCCACCAGTCACCAAAGGCCCTTCCC...CTGGTCCCTCTCCCGGAGGCCCTTGTAGAGGGCCACGTCCATAAATTTTCTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
3UTR-3UTR TCA 90 bp GATTCCAAAGATCCTACAGCCTTACTCTCCAGCTCCAGGCCAATGCAGCTGCTCGGGAAGGGCCTTTGGTaGCTGGTGGCAGCAGAATGT +
Preference number: 2 (lower is better)
Translates to: DSKDPTALLSSSRPMQLLGKGLW*LVAAEC
Trigger: ACATTCTGCTGCCACCAGTCACCAAAGGCCCTTCCC...GAGCAGCTGCATTGGCCTGGAGCTGGAGAGTAAGGCTGTAGGATCTTTGGAATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
3UTR-3UTR GCA 90 bp TCCAGCTCCAGGCCAATGCAGCTGCTCACAGGTCCTGTTCTGGGATTGAAGACCCGTGTCGTCTCCTTGTaGTTCTCAGAGGGATGTGTG +
Preference number: 2 (lower is better)
Translates to: SSSRPMQLLTGPVLGLKTRVVSL*FSEGCV
Trigger: CACACATCCCTCTGAGAAGCACAAGGAGACGACACG...GGTCTTCAATCCCAGAACAGGACCTGTGAGCAGCTGCATTGGCCTGGAGCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
3UTR-3UTR CCA 90 bp CATCCCACTGCCCCAACTTCAGGAGTCGCCAATCCCCAGCTCCCTTCTGTCTCTAGGGCCTTTGGTGACTaGTGGCAGCAGAATGTAGAT +
Preference number: 2 (lower is better)
Translates to: HPTAPTSGVANPQLPSVSRAFGD*WQQNVD
Trigger: ATCTACATTCTGCTGCCACCAGTCACCAAAGGCCCT...AGAGACAGAAGGGAGCTGGGGATTGGCGACTCCTGAAGTTGGGGCAGTGGGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
3UTR-3UTR CCA 90 bp CATAAGAAAATTTATGGACGTGGCCCTCTACAAGGGCCTCCGGGAGAGGGACCACCTTCCACCCCTCACTaGGAAGGGCCTTTGGTGACT +
Preference number: 2 (lower is better)
Translates to: HKKIYGRGPLQGPPGEGPPSTPH*EGPLVT
Trigger: AGTCACCAAAGGCCCTTCCCAGTGAGGGGTGGAAGG...TGGTCCCTCTCCCGGAGGCCCTTGTAGAGGGCCACGTCCATAAATTTTCTTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
3UTR-3UTR CCA 90 bp GGACGTGGCCCTCTACAAGGGCCTCCGGGAGAGGGACCAGTGAGGTTAGGCACTTTAAGGTACATTCTCTaGTTTGGGGCCAAATTCCAG +
Preference number: 2 (lower is better)
Translates to: GRGPLQGPPGEGPVRLGTLRYIL*FGAKFQ
Trigger: CTGGAATTTGGCCCCAAACCAGAGAATGTACCTTAA...AGTGCCTAACCTCACTGGTCCCTCTCCCGGAGGCCCTTGTAGAGGGCCACGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
3UTR-3UTR CCA 90 bp ACTTGGCTTAGTGTCCAGGGTAGACCTCCATCCCCTGGGTGGGGGCTATCTCTACTTGGGGTGGGAGAATaGTTCTCAGAGACAAGAGGG +
Preference number: 2 (lower is better)
Translates to: TWLSVQGRPPSPGWGLSLLGVGE*FSETRG
Trigger: CCCTCTTGTCTCTGAGAACCATTCTCCCACCCCAAG...TAGAGATAGCCCCCACCCAGGGGATGGAGGTCTACCCTGGACACTAAGCCAAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
3UTR-3UTR CCA 90 bp CGTCTCCTTGTGCTTCTCAGAGGGATGTGTGTACACAGTACAGACACCAGGGGAGTGAGGAAAGGGGGCTaGGCACCCAGAAGGAGGAAA +
Preference number: 2 (lower is better)
Translates to: RLLVLLRGMCVHSTDTRGVRKGG*APRRRK
Trigger: TTTCCTCCTTCTGGGTGCCCAGCCCCCTTTCCTCAC...TCCCCTGGTGTCTGTACTGTGTACACACATCCCTCTGAGAAGCACAAGGAGACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
3UTR-3UTR TCA 90 bp AAGTTGGGGAAGAGGATGTGGGAGAGTTCCATAAGAAAATTTATGGACGTGGCCGAGAGAGGGGCAGCCTaGGGTCCCTTGCCCCGTTCT +
Preference number: 2 (lower is better)
Translates to: KLGKRMWESSIRKFMDVAERGAA*GPLPRS
Trigger: AGAACGGGGCAAGGGACCTCAGGCTGCCCCTCTCTC...GGCCACGTCCATAAATTTTCTTATGGAACTCTCCCACATCCTCTTCCCCAACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
3UTR-3UTR TCA 90 bp CATCCCACTGCCCCAACTTCAGGAGTCGCCAATCCCCAGCTCCCTTCTGTCTCTTTCCTTTGTCGCCACTaGGACAGTGCAAAGGTTACA +
Preference number: 2 (lower is better)
Translates to: HPTAPTSGVANPQLPSVSFLCRH*DSAKVT
Trigger: TGTAACCTTTGCACTGTCTCAGTGGCGACAAAGGAA...AGAGACAGAAGGGAGCTGGGGATTGGCGACTCCTGAAGTTGGGGCAGTGGGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
3UTR-3UTR GCA 90 bp ACTTGGCTTAGTGTCCAGGGTAGACCTCCATCCCCTGGGTGGGGGCTATCTCTAGTGCAAAGGTTACAATaGGCGTGTCGTCTCCTTGTG +
Preference number: 2 (lower is better)
Translates to: TWLSVQGRPPSPGWGLSLVQRLQ*ACRLLV
Trigger: CACAAGGAGACGACACGCGCATTGTAACCTTTGCAC...TAGAGATAGCCCCCACCCAGGGGATGGAGGTCTACCCTGGACACTAAGCCAAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
3UTR-3UTR GCA 90 bp CCAATGCAGCTGCTCACAGGTCCTGTTCTGGGATTGAAGACCAAGACACAGCTACGCCCTTGTCCGCACTaGTCCTTTTGGCCTCCTTCT +
Preference number: 2 (lower is better)
Translates to: PMQLLTGPVLGLKTKTQLRPCPH*SFWPPS
Trigger: AGAAGGAGGCCAAAAGGAGCAGTGCGGACAAGGGCG...TAGCTGTGTCTTGGTCTTCAATCCCAGAACAGGACCTGTGAGCAGCTGCATTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550558.5
3UTR-3UTR CCA 90 bp AAGTTGGGGAAGAGGATGTGGGAGAGTTCCATAAGAAAATTTATGGACGTGGCCCCCCATCTAGGCCTTTaGTTCAGCGGCCTGCGGGGC +
Preference number: 2 (lower is better)
Translates to: KLGKRMWESSIRKFMDVAPHLGL*FSGLRG
Trigger: GCCCCGCAGGCCGCTGAACCAAAGGCCTAGATGGGG...GGCCACGTCCATAAATTTTCTTATGGAACTCTCCCACATCCTCTTCCCCAACTT
54% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
3UTR-3UTR CCA 90 bp AGCACCAGGATGTTCTCCCCTATGTATTGCTCAGATTTGTTGAACTTCTTGGCCCCCCATCTAGGCCTTTaGTTCAGCGGCCTGCGGGGC +
Preference number: 2 (lower is better)
Translates to: STRMFSPMYCSDLLNFLAPHLGL*FSGLRG
Trigger: GCCCCGCAGGCCGCTGAACCAAAGGCCTAGATGGGG...GGCCAAGAAGTTCAACAAATCTGAGCAATACATAGGGGAGAACATCCTGGTGCT
54% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000550558.5
3UTR-3UTR CCA 90 bp ACTGCCCCAACTTCAGGAGTCGCCAATCCCCAGCTCCCTTCTGTCTCTGACACAGCCTTTGGTGACTGGTaGCAGCAGAATGTAGATGGA +
Preference number: 2 (lower is better)
Translates to: TAPTSGVANPQLPSVSDTAFGDW*QQNVDG
Trigger: TCCATCTACATTCTGCTGCCACCAGTCACCAAAGGC...TGTGTCAGAGACAGAAGGGAGCTGGGGATTGGCGACTCCTGAAGTTGGGGCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
3UTR-3UTR CCA 90 bp CATCCCACTGCCCCAACTTCAGGAGTCGCCAATCCCCAGCTCCCTTCTGTCTCTATAGAAGGTGGAACTTaGGGTGGGAGAATGGTTCTC +
Preference number: 2 (lower is better)
Translates to: HPTAPTSGVANPQLPSVSIEGGT*GGRMVL
Trigger: GAGAACCATTCTCCCACCCCAAGTTCCACCTTCTAT...AGAGACAGAAGGGAGCTGGGGATTGGCGACTCCTGAAGTTGGGGCAGTGGGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
3UTR-3UTR CCA 90 bp ACCCAGAGCCCTGCCTGCTGTTCCCCTATCCAATGCACACTTTTTGGCCTCATTCTCTGGAGTACAGTATaGGGCATCCCCTGGCATGTG +
Preference number: 2 (lower is better)
Translates to: TQSPACCSPIQCTLFGLILWSTV*GIPWHV
Trigger: CACATGCCAGGGGATGCCCCATACTGTACTCCAGAG...AATGAGGCCAAAAAGTGTGCATTGGATAGGGGAACAGCAGGCAGGGCTCTGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000550558.5
3UTR-3UTR CCA 90 bp ATAAGAAAATTTATGGACGTGGCCCTCTACAAGGGCCTCCGGGAGAGGGACCAGCACACGCAGTACTCCTaGTCCTTCTCCACCAGGAAG +
Preference number: 2 (lower is better)
Translates to: IRKFMDVALYKGLRERDQHTQYS*SFSTRK
Trigger: CTTCCTGGTGGAGAAGGACCAGGAGTACTGCGTGTG...CTGGTCCCTCTCCCGGAGGCCCTTGTAGAGGGCCACGTCCATAAATTTTCTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550558.5
3UTR-3UTR CCA 90 bp ACCCAGAGCCCTGCCTGCTGTTCCCCTATCCAATGCACACTTTTTGGCCTCATTTCTTGGCCAGGTACTTaGCTGAGGCTTTGCTGGGGA +
Preference number: 2 (lower is better)
Translates to: TQSPACCSPIQCTLFGLISWPGT*LRLCWG
Trigger: TCCCCAGCAAAGCCTCAGCCAAGTACCTGGCCAAGA...AATGAGGCCAAAAAGTGTGCATTGGATAGGGGAACAGCAGGCAGGGCTCTGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000550558.5
3UTR CAA 90 bp TCGCCACTGAGACAGTGCAAAGGTTACAATGCGCGTGTCGTCTCCTaGTGCTTCTCAGAGGGATGTGTGTACACAGTACAGACACCAGGG +
Preference number: 2 (lower is better)
Translates to: SPLRQCKGYNARVVS*CFSEGCVYTVQTPG
Trigger: CCCTGGTGTCTGTACTGTGTACACACATCCCTCTGAGAAGCACAAGGAGACGACACGCGCATTGTAACCTTTGCACTGTCTCAGTGGCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
3UTR CAA 90 bp AGGGTGAGGCCAGAAAGAGGCAGAGCTTGTGATTCACAGCTTCCTTaGTCGCCACTGAGACAGTGCAAAGGTTACAATGCGCGTGTCGTC +
Preference number: 2 (lower is better)
Translates to: RVRPERGRACDSQLP*SPLRQCKGYNARVV
Trigger: GACGACACGCGCATTGTAACCTTTGCACTGTCTCAGTGGCGACAAAGGAAGCTGTGAATCACAAGCTCTGCCTCTTTCTGGCCTCACCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
3UTR-3UTR TCA 90 bp ACAGCTTCCTTTGTCGCCACTGAGACAGTGCAAAGGTTACAATGCGCGTGTCGTGTGAGAGAGTGGGGCTaGGGTTTTAGTTCCTGCCAG +
Preference number: 2 (lower is better)
Translates to: TASFVATETVQRLQCACRVREWG*GFSSCQ
Trigger: CTGGCAGGAACTAAAACCTCAGCCCCACTCTCTCAC...ACGACACGCGCATTGTAACCTTTGCACTGTCTCAGTGGCGACAAAGGAAGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
3UTR-3UTR TCA 90 bp GATTCCAAAGATCCTACAGCCTTACTCTCCAGCTCCAGGCCAATGCAGCTGCTCAGATTCCACATGGTGTaGGAGAGTGGGGCTGAGGTT +
Preference number: 2 (lower is better)
Translates to: DSKDPTALLSSSRPMQLLRFHMV*ESGAEV
Trigger: AACCTCAGCCCCACTCTCTCACACCATGTGGAATCT...GAGCAGCTGCATTGGCCTGGAGCTGGAGAGTAAGGCTGTAGGATCTTTGGAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
3UTR-3UTR CCA 90 bp GGCTATCTCTACAGCAACCCCTTCCCTGGGGATGCCACTGTCAGCTGGGCAGAGTTAAGGTACATTCTCTaGTTTGGGGCCAAATTCCAG +
Preference number: 2 (lower is better)
Translates to: GYLYSNPFPGDATVSWAELRYIL*FGAKFQ
Trigger: CTGGAATTTGGCCCCAAACCAGAGAATGTACCTTAA...CTCTGCCCAGCTGACAGTGGCATCCCCAGGGAAGGGGTTGCTGTAGAGATAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
3UTR-3UTR CCA 90 bp CTATCTCTACAGCAACCCCTTCCCTGGGGATGCCACTGTCAGCTGGGCAGAGGGTTGGGGAAGAGGATGTaGGAGAGTTCCATAAGAAAA +
Preference number: 2 (lower is better)
Translates to: LSLQQPLPWGCHCQLGRGLGKRM*ESSIRK
Trigger: TTTTCTTATGGAACTCTCCCACATCCTCTTCCCCAA...CCCTCTGCCCAGCTGACAGTGGCATCCCCAGGGAAGGGGTTGCTGTAGAGATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
3UTR-3UTR TCA 90 bp ATAAGAAAATTTATGGACGTGGCCCTCTACAAGGGCCTCCGGGAGAGGGACCAGTATGGATCTGCACTTTaGTGCCTGCTTCGAAGGACG +
Preference number: 2 (lower is better)
Translates to: IRKFMDVALYKGLRERDQYGSAL*CLLRRT
Trigger: CGTCCTTCGAAGCAGGCATCAAAGTGCAGATCCATA...CTGGTCCCTCTCCCGGAGGCCCTTGTAGAGGGCCACGTCCATAAATTTTCTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550558.5
3UTR-3UTR TCA 90 bp TCCAGCTCCAGGCCAATGCAGCTGCTCACAGGTCCTGTTCTGGGATTGAAGACCAAAGGAGGTTCATCCTaGCTATGGATCTGCACTTTG +
Preference number: 2 (lower is better)
Translates to: SSSRPMQLLTGPVLGLKTKGGSS*LWICTL
Trigger: CAAAGTGCAGATCCATAGTCAGGATGAACCTCCTTT...GGTCTTCAATCCCAGAACAGGACCTGTGAGCAGCTGCATTGGCCTGGAGCTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550558.5
3UTR-3UTR CCA 90 bp ACCCAGAGCCCTGCCTGCTGTTCCCCTATCCAATGCACACTTTTTGGCCTCATTGAAAATTTATGGACGTaGCCCTCTACAAGGGCCTCC +
Preference number: 2 (lower is better)
Translates to: TQSPACCSPIQCTLFGLIENLWT*PSTRAS
Trigger: GGAGGCCCTTGTAGAGGGCCACGTCCATAAATTTTC...AATGAGGCCAAAAAGTGTGCATTGGATAGGGGAACAGCAGGCAGGGCTCTGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
3UTR-3UTR TCA 90 bp GCCTTTGGTGACTGGTGGCAGCAGAATGTAGATGGACACTCAGATGGCAGACAGTTCCTTTGTCGCCACTaGGACAGTGCAAAGGTTACA +
Preference number: 2 (lower is better)
Translates to: AFGDWWQQNVDGHSDGRQFLCRH*DSAKVT
Trigger: TGTAACCTTTGCACTGTCTCAGTGGCGACAAAGGAA...CTGTCTGCCATCTGAGTGTCCATCTACATTCTGCTGCCACCAGTCACCAAAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
3UTR-3UTR TCA 90 bp CGTCTCCTTGTGCTTCTCAGAGGGATGTGTGTACACAGTACAGACACCAGGGGAAAGAGGCAGAGCTTGTaGTTCACAGCTTCCTTTGTC +
Preference number: 2 (lower is better)
Translates to: RLLVLLRGMCVHSTDTRGKRQSL*FTASFV
Trigger: GACAAAGGAAGCTGTGAATCACAAGCTCTGCCTCTT...TCCCCTGGTGTCTGTACTGTGTACACACATCCCTCTGAGAAGCACAAGGAGACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
3UTR-3UTR CCA 90 bp ACAGCTTCCTTTGTCGCCACTGAGACAGTGCAAAGGTTACAATGCGCGTGTCGTAGGGCCTTTGGTGACTaGTGGCAGCAGAATGTAGAT +
Preference number: 2 (lower is better)
Translates to: TASFVATETVQRLQCACRRAFGD*WQQNVD
Trigger: ATCTACATTCTGCTGCCACCAGTCACCAAAGGCCCT...ACGACACGCGCATTGTAACCTTTGCACTGTCTCAGTGGCGACAAAGGAAGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
3UTR-3UTR CCA 90 bp TCCTTTGTCGCCACTGAGACAGTGCAAAGGTTACAATGCGCGTGTCGTCTCCTTCTCCTTGTACTGCTCTaGAGTACAGTATGGGGCATC +
Preference number: 2 (lower is better)
Translates to: SFVATETVQRLQCACRLLLLVLL*STVWGI
Trigger: GATGCCCCATACTGTACTCCAGAGCAGTACAAGGAG...AAGGAGACGACACGCGCATTGTAACCTTTGCACTGTCTCAGTGGCGACAAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550558.5
3UTR-3UTR TCA 90 bp AAGTTGGGGAAGAGGATGTGGGAGAGTTCCATAAGAAAATTTATGGACGTGGCCGTGAGAGAGTGGGGCTaGGGTTTTAGTTCCTGCCAG +
Preference number: 2 (lower is better)
Translates to: KLGKRMWESSIRKFMDVAVREWG*GFSSCQ
Trigger: CTGGCAGGAACTAAAACCTCAGCCCCACTCTCTCAC...GGCCACGTCCATAAATTTTCTTATGGAACTCTCCCACATCCTCTTCCCCAACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
3UTR-3UTR CCA 90 bp GCTTCCTTTGTCGCCACTGAGACAGTGCAAAGGTTACAATGCGCGTGTCGTCTCAGAGAGAGGACTCTATaGTCAAGACTCCTTCCTTAC +
Preference number: 2 (lower is better)
Translates to: ASFVATETVQRLQCACRLRERTL*SRLLPY
Trigger: GTAAGGAAGGAGTCTTGACCATAGAGTCCTCTCTCT...GAGACGACACGCGCATTGTAACCTTTGCACTGTCTCAGTGGCGACAAAGGAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
3UTR-3UTR GCA 90 bp ATGAAGTTGGGGAAGAGGATGTGGGAGAGTTCCATAAGAAAATTTATGGACGTGGAGGACCTCAGCTTCTaGCTGTCAGCATCCCACTGC +
Preference number: 2 (lower is better)
Translates to: MKLGKRMWESSIRKFMDVEDLSF*LSASHC
Trigger: GCAGTGGGATGCTGACAGGCAGAAGCTGAGGTCCTC...CACGTCCATAAATTTTCTTATGGAACTCTCCCACATCCTCTTCCCCAACTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
3UTR-3UTR CCA 90 bp GAAGCAAATGAAGTTGGGGAAGAGGATGTGGGAGAGTTCCATAAGAAAATTTATATCTGCCCCGGAGTGTaGGGAGTCCCCAGGGCAGAT +
Preference number: 2 (lower is better)
Translates to: EANEVGEEDVGEFHKKIYICPGV*GVPRAD
Trigger: ATCTGCCCTGGGGACTCCCCACACTCCGGGGCAGAT...ATAAATTTTCTTATGGAACTCTCCCACATCCTCTTCCCCAACTTCATTTGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
3UTR-3UTR CCA 90 bp GCTTCCTTTGTCGCCACTGAGACAGTGCAAAGGTTACAATGCGCGTGTCGTCTCTTAAGGTACATTCTCTaGTTTGGGGCCAAATTCCAG +
Preference number: 2 (lower is better)
Translates to: ASFVATETVQRLQCACRLLRYIL*FGAKFQ
Trigger: CTGGAATTTGGCCCCAAACCAGAGAATGTACCTTAA...GAGACGACACGCGCATTGTAACCTTTGCACTGTCTCAGTGGCGACAAAGGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
3UTR-3UTR CCA 90 bp GATTCCAAAGATCCTACAGCCTTACTCTCCAGCTCCAGGCCAATGCAGCTGCTCTTGGGGAAGAGGATGTaGGAGAGTTCCATAAGAAAA +
Preference number: 2 (lower is better)
Translates to: DSKDPTALLSSSRPMQLLLGKRM*ESSIRK
Trigger: TTTTCTTATGGAACTCTCCCACATCCTCTTCCCCAA...GAGCAGCTGCATTGGCCTGGAGCTGGAGAGTAAGGCTGTAGGATCTTTGGAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
3UTR-3UTR CCA 90 bp ATGAAGTTGGGGAAGAGGATGTGGGAGAGTTCCATAAGAAAATTTATGGACGTGGTGAGGAAAGGGGGCTaGGCACCCAGAAGGAGGAAA +
Preference number: 2 (lower is better)
Translates to: MKLGKRMWESSIRKFMDVVRKGG*APRRRK
Trigger: TTTCCTCCTTCTGGGTGCCCAGCCCCCTTTCCTCAC...CACGTCCATAAATTTTCTTATGGAACTCTCCCACATCCTCTTCCCCAACTTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
3UTR-3UTR TCA 90 bp TCAAAGAAAATGTCCAGCACCAGGATGTTCTCCCCTATGTATTGCTCAGATTTGAGCCCAGCTGGTCGATaGAAGGAGGTTCATCCTGAC +
Preference number: 2 (lower is better)
Translates to: SKKMSSTRMFSPMYCSDLSPAGR*KEVHPD
Trigger: GTCAGGATGAACCTCCTTTCATCGACCAGCTGGGCT...CAAATCTGAGCAATACATAGGGGAGAACATCCTGGTGCTGGACATTTTCTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550558.5
3UTR-3UTR TCA 90 bp ATGAAGTTGGGGAAGAGGATGTGGGAGAGTTCCATAAGAAAATTTATGGACGTGAGATTCCACATGGTGTaGGAGAGTGGGGCTGAGGTT +
Preference number: 2 (lower is better)
Translates to: MKLGKRMWESSIRKFMDVRFHMV*ESGAEV
Trigger: AACCTCAGCCCCACTCTCTCACACCATGTGGAATCT...CACGTCCATAAATTTTCTTATGGAACTCTCCCACATCCTCTTCCCCAACTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
3UTR-3UTR CCA 90 bp ATGAAGTTGGGGAAGAGGATGTGGGAGAGTTCCATAAGAAAATTTATGGACGTGGCCTTTGGTGACTGGTaGCAGCAGAATGTAGATGGA +
Preference number: 2 (lower is better)
Translates to: MKLGKRMWESSIRKFMDVAFGDW*QQNVDG
Trigger: TCCATCTACATTCTGCTGCCACCAGTCACCAAAGGC...CACGTCCATAAATTTTCTTATGGAACTCTCCCACATCCTCTTCCCCAACTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
3UTR-3UTR CCA 90 bp ATGATCTCTGAGGAAACTCTTAGGAACCAAGAGATTCCAAAGATCCTACAGCCTATAGAAGGTGGAACTTaGGGTGGGAGAATGGTTCTC +
Preference number: 2 (lower is better)
Translates to: MISEETLRNQEIPKILQPIEGGT*GGRMVL
Trigger: GAGAACCATTCTCCCACCCCAAGTTCCACCTTCTAT...AGGCTGTAGGATCTTTGGAATCTCTTGGTTCCTAAGAGTTTCCTCAGAGATCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
3UTR-3UTR CCA 90 bp ATGAAGTTGGGGAAGAGGATGTGGGAGAGTTCCATAAGAAAATTTATGGACGTGAGAGAGAGGACTCTATaGTCAAGACTCCTTCCTTAC +
Preference number: 2 (lower is better)
Translates to: MKLGKRMWESSIRKFMDVRERTL*SRLLPY
Trigger: GTAAGGAAGGAGTCTTGACCATAGAGTCCTCTCTCT...CACGTCCATAAATTTTCTTATGGAACTCTCCCACATCCTCTTCCCCAACTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
3UTR-3UTR CAA 90 bp CTATCTCTACAGCAACCCCTTCCCTGGGGATGCCACTGTCAGCTGGGCAGAGGGCCGAGGGTGCCCGGGTaGGGGGAGAGGGTGAGGCCA +
Preference number: 3 (lower is better)
Translates to: LSLQQPLPWGCHCQLGRGPRVPG*GERVRP
Trigger: TGGCCTCACCCTCTCCCCCAACCCGGGCACCCTCGG...CCCTCTGCCCAGCTGACAGTGGCATCCCCAGGGAAGGGGTTGCTGTAGAGATAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
3UTR-3UTR CAA 90 bp CATCCCACTGCCCCAACTTCAGGAGTCGCCAATCCCCAGCTCCCTTCTGTCTCTCCGAGGGTGCCCGGGTaGGGGGAGAGGGTGAGGCCA +
Preference number: 3 (lower is better)
Translates to: HPTAPTSGVANPQLPSVSPRVPG*GERVRP
Trigger: TGGCCTCACCCTCTCCCCCAACCCGGGCACCCTCGG...AGAGACAGAAGGGAGCTGGGGATTGGCGACTCCTGAAGTTGGGGCAGTGGGATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
3UTR-3UTR CAA 90 bp ACTTGGCTTAGTGTCCAGGGTAGACCTCCATCCCCTGGGTGGGGGCTATCTCTACCGAGGGTGCCCGGGTaGGGGGAGAGGGTGAGGCCA +
Preference number: 3 (lower is better)
Translates to: TWLSVQGRPPSPGWGLSLPRVPG*GERVRP
Trigger: TGGCCTCACCCTCTCCCCCAACCCGGGCACCCTCGG...TAGAGATAGCCCCCACCCAGGGGATGGAGGTCTACCCTGGACACTAAGCCAAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
3UTR-3UTR CAA 90 bp GGACGTGGCCCTCTACAAGGGCCTCCGGGAGAGGGACCAGTGAGGTTAGGCACTCCAGGAGACTTGGGTTaGGGGACAGTCACTGGGCTG +
Preference number: 3 (lower is better)
Translates to: GRGPLQGPPGEGPVRLGTPGDLG*GTVTGL
Trigger: CAGCCCAGTGACTGTCCCCAAACCCAAGTCTCCTGG...AGTGCCTAACCTCACTGGTCCCTCTCCCGGAGGCCCTTGTAGAGGGCCACGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
3UTR-3UTR CAA 90 bp CTATCTCTACAGCAACCCCTTCCCTGGGGATGCCACTGTCAGCTGGGCAGAGGGCTGAGGGCCACGCCCTaGTCCGCACTGCTCCTTTTG +
Preference number: 3 (lower is better)
Translates to: LSLQQPLPWGCHCQLGRGLRATP*SALLLL
Trigger: CAAAAGGAGCAGTGCGGACAAGGGCGTGGCCCTCAG...CCCTCTGCCCAGCTGACAGTGGCATCCCCAGGGAAGGGGTTGCTGTAGAGATAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000550558.5
3UTR-3UTR CAA 90 bp TCCAGCTCCAGGCCAATGCAGCTGCTCACAGGTCCTGTTCTGGGATTGAAGACCTCCCCATCTAGGCCTTaGGTTCAGCGGCCTGCGGGG +
Preference number: 3 (lower is better)
Translates to: SSSRPMQLLTGPVLGLKTSPSRP*VQRPAG
Trigger: CCCCGCAGGCCGCTGAACCAAAGGCCTAGATGGGGA...GGTCTTCAATCCCAGAACAGGACCTGTGAGCAGCTGCATTGGCCTGGAGCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
3UTR-3UTR CAA 90 bp GGCTATCTCTACAGCAACCCCTTCCCTGGGGATGCCACTGTCAGCTGGGCAGAGCCAGGAGACTTGGGTTaGGGGACAGTCACTGGGCTG +
Preference number: 3 (lower is better)
Translates to: GYLYSNPFPGDATVSWAEPGDLG*GTVTGL
Trigger: CAGCCCAGTGACTGTCCCCAAACCCAAGTCTCCTGG...CTCTGCCCAGCTGACAGTGGCATCCCCAGGGAAGGGGTTGCTGTAGAGATAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
3UTR-3UTR CAA 90 bp CATCCCACTGCCCCAACTTCAGGAGTCGCCAATCCCCAGCTCCCTTCTGTCTCTCACTGGGAAGGGCCTTaGGTGACTGGTGGCAGCAGA +
Preference number: 3 (lower is better)
Translates to: HPTAPTSGVANPQLPSVSHWEGP*VTGGSR
Trigger: TCTGCTGCCACCAGTCACCAAAGGCCCTTCCCAGTG...AGAGACAGAAGGGAGCTGGGGATTGGCGACTCCTGAAGTTGGGGCAGTGGGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
3UTR-3UTR CAA 90 bp GACAGTGCAAAGGTTACAATGCGCGTGTCGTCTCCTTGTGCTTCTCAGAGGGATTCCCCATCTAGGCCTTaGGTTCAGCGGCCTGCGGGG +
Preference number: 3 (lower is better)
Translates to: DSAKVTMRVSSPCASQRDSPSRP*VQRPAG
Trigger: CCCCGCAGGCCGCTGAACCAAAGGCCTAGATGGGGA...ATCCCTCTGAGAAGCACAAGGAGACGACACGCGCATTGTAACCTTTGCACTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
ENST00000552633.2
3UTR-3UTR CAA 90 bp TCCTTTGTCGCCACTGAGACAGTGCAAAGGTTACAATGCGCGTGTCGTCTCCTTTCCCCATCTAGGCCTTaGGTTCAGCGGCCTGCGGGG +
Preference number: 3 (lower is better)
Translates to: SFVATETVQRLQCACRLLSPSRP*VQRPAG
Trigger: CCCCGCAGGCCGCTGAACCAAAGGCCTAGATGGGGA...AAGGAGACGACACGCGCATTGTAACCTTTGCACTGTCTCAGTGGCGACAAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
3UTR-3UTR CAA 90 bp TTGTGCTTCTCAGAGGGATGTGTGTACACAGTACAGACACCAGGGGAGAGAGTCTCCCCATCTAGGCCTTaGGTTCAGCGGCCTGCGGGG +
Preference number: 3 (lower is better)
Translates to: LCFSEGCVYTVQTPGERVSPSRP*VQRPAG
Trigger: CCCCGCAGGCCGCTGAACCAAAGGCCTAGATGGGGA...GACTCTCTCCCCTGGTGTCTGTACTGTGTACACACATCCCTCTGAGAAGCACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
ENST00000552633.2
3UTR-3UTR CAA 90 bp ACTGCCCCAACTTCAGGAGTCGCCAATCCCCAGCTCCCTTCTGTCTCTGACACAGCGCGTGTCGTCTCCTaGTGCTTCTCAGAGGGATGT +
Preference number: 3 (lower is better)
Translates to: TAPTSGVANPQLPSVSDTARVVS*CFSEGC
Trigger: ACATCCCTCTGAGAAGCACAAGGAGACGACACGCGC...TGTGTCAGAGACAGAAGGGAGCTGGGGATTGGCGACTCCTGAAGTTGGGGCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
3UTR GCA 72 bp ACCAGCCCGGTCTTTAATGGGATGGTGAGGAAGGGCTaGCTCTTGGGATTTCTCTCCAGCAGCTGTGGGGTG +
Preference number: 3 (lower is better)
Translates to: TSPVFNGMVRKG*LLGFLSSSCGV
Trigger: CACCCCACAGCTGCTGGAGAGAAATCCCAAGAGGCAGCCCTTCCTCACCATCCCATTAAAGACCGGGCTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
3UTR-3UTR CAA 90 bp GCTTCCTTTGTCGCCACTGAGACAGTGCAAAGGTTACAATGCGCGTGTCGTCTCCACTGGGAAGGGCCTTaGGTGACTGGTGGCAGCAGA +
Preference number: 3 (lower is better)
Translates to: ASFVATETVQRLQCACRLHWEGP*VTGGSR
Trigger: TCTGCTGCCACCAGTCACCAAAGGCCCTTCCCAGTG...GAGACGACACGCGCATTGTAACCTTTGCACTGTCTCAGTGGCGACAAAGGAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
3UTR-3UTR CAA 90 bp GCCTTTGGTGACTGGTGGCAGCAGAATGTAGATGGACACTCAGATGGCAGACAGCACTGGGAAGGGCCTTaGGTGACTGGTGGCAGCAGA +
Preference number: 3 (lower is better)
Translates to: AFGDWWQQNVDGHSDGRQHWEGP*VTGGSR
Trigger: TCTGCTGCCACCAGTCACCAAAGGCCCTTCCCAGTG...CTGTCTGCCATCTGAGTGTCCATCTACATTCTGCTGCCACCAGTCACCAAAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
3UTR-3UTR CAA 90 bp CATAAGAAAATTTATGGACGTGGCCCTCTACAAGGGCCTCCGGGAGAGGGACCACCAGGAGACTTGGGTTaGGGGACAGTCACTGGGCTG +
Preference number: 3 (lower is better)
Translates to: HKKIYGRGPLQGPPGEGPPGDLG*GTVTGL
Trigger: CAGCCCAGTGACTGTCCCCAAACCCAAGTCTCCTGG...TGGTCCCTCTCCCGGAGGCCCTTGTAGAGGGCCACGTCCATAAATTTTCTTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
3UTR-3UTR CAA 90 bp ACTTGGCTTAGTGTCCAGGGTAGACCTCCATCCCCTGGGTGGGGGCTATCTCTATTCCTGCCAGGAGACTaGGGTTTGGGGACAGTCACT +
Preference number: 3 (lower is better)
Translates to: TWLSVQGRPPSPGWGLSLFLPGD*GLGTVT
Trigger: AGTGACTGTCCCCAAACCCAAGTCTCCTGGCAGGAA...TAGAGATAGCCCCCACCCAGGGGATGGAGGTCTACCCTGGACACTAAGCCAAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
3UTR-3UTR CAA 90 bp CTATCTCTACAGCAACCCCTTCCCTGGGGATGCCACTGTCAGCTGGGCAGAGGGTCCAATGCACACTTTTaGGCCTCATTCCTGCTTCCC +
Preference number: 3 (lower is better)
Translates to: LSLQQPLPWGCHCQLGRGSNAHF*ASFLLP
Trigger: GGGAAGCAGGAATGAGGCCAAAAAGTGTGCATTGGA...CCCTCTGCCCAGCTGACAGTGGCATCCCCAGGGAAGGGGTTGCTGTAGAGATAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
3UTR-3UTR CAA 90 bp AAGAATGGGATAGAGGCAGAGAGAGGACTCTATGGTCAAGACTCCTTCCTTACCTCCCCATCTAGGCCTTaGGTTCAGCGGCCTGCGGGG +
Preference number: 3 (lower is better)
Translates to: KNGIEAERGLYGQDSFLTSPSRP*VQRPAG
Trigger: CCCCGCAGGCCGCTGAACCAAAGGCCTAGATGGGGA...GGTAAGGAAGGAGTCTTGACCATAGAGTCCTCTCTCTGCCTCTATCCCATTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000453327.7
ENST00000550558.5
ENST00000552438.5
3UTR-3UTR CAA 90 bp ACCCAGAGCCCTGCCTGCTGTTCCCCTATCCAATGCACACTTTTTGGCCTCATTGCGCGTGTCGTCTCCTaGTGCTTCTCAGAGGGATGT +
Preference number: 3 (lower is better)
Translates to: TQSPACCSPIQCTLFGLIARVVS*CFSEGC
Trigger: ACATCCCTCTGAGAAGCACAAGGAGACGACACGCGC...AATGAGGCCAAAAAGTGTGCATTGGATAGGGGAACAGCAGGCAGGGCTCTGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
3UTR-3UTR CAA 90 bp ACTGCCCCAACTTCAGGAGTCGCCAATCCCCAGCTCCCTTCTGTCTCTGACACAGATTCACAGCTTCCTTaGTCGCCACTGAGACAGTGC +
Preference number: 3 (lower is better)
Translates to: TAPTSGVANPQLPSVSDTDSQLP*SPLRQC
Trigger: GCACTGTCTCAGTGGCGACAAAGGAAGCTGTGAATC...TGTGTCAGAGACAGAAGGGAGCTGGGGATTGGCGACTCCTGAAGTTGGGGCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
3UTR-3UTR CAA 90 bp GATTCCAAAGATCCTACAGCCTTACTCTCCAGCTCCAGGCCAATGCAGCTGCTCCACCAGGGCCGCATCTaGTCCCCATTACCACTTCTT +
Preference number: 3 (lower is better)
Translates to: DSKDPTALLSSSRPMQLLHQGRI*SPLPLL
Trigger: AAGAAGTGGTAATGGGGACAAGATGCGGCCCTGGTG...GAGCAGCTGCATTGGCCTGGAGCTGGAGAGTAAGGCTGTAGGATCTTTGGAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
3UTR-3UTR CAA 90 bp CCAATGCAGCTGCTCACAGGTCCTGTTCTGGGATTGAAGACCAAGACACAGCTAGCGCGTGTCGTCTCCTaGTGCTTCTCAGAGGGATGT +
Preference number: 3 (lower is better)
Translates to: PMQLLTGPVLGLKTKTQLARVVS*CFSEGC
Trigger: ACATCCCTCTGAGAAGCACAAGGAGACGACACGCGC...TAGCTGTGTCTTGGTCTTCAATCCCAGAACAGGACCTGTGAGCAGCTGCATTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
3UTR-3UTR CAA 90 bp CCAATGCAGCTGCTCACAGGTCCTGTTCTGGGATTGAAGACCAAGACACAGCTAAGGCTCTCGCACGGGTaGTGTCTTTTGACGTCGTCC +
Preference number: 3 (lower is better)
Translates to: PMQLLTGPVLGLKTKTQLRLSHG*CLLTSS
Trigger: GGACGACGTCAAAAGACACAACCCGTGCGAGAGCCT...TAGCTGTGTCTTGGTCTTCAATCCCAGAACAGGACCTGTGAGCAGCTGCATTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550558.5
3UTR CCA 72 bp GTCAGGTTGCAAGGCATTTCACACACGCAGTACTCCTaGTCCTTCTCCACCAGGAAGTCCAGAGCAGGATCT +
Preference number: 3 (lower is better)
Translates to: VRLQGISHTQYS*SFSTRKSRAGS
Trigger: AGATCCTGCTCTGGACTTCCTGGTGGAGAAGGACCAGGAGTACTGCGTGTGTGAAATGCCTTGCAACCTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550558.5
3UTR-3UTR CAA 90 bp CATAAGAAAATTTATGGACGTGGCCCTCTACAAGGGCCTCCGGGAGAGGGACCAGGTACATTCTCTGGTTaGGGGCCAAATTCCAGACCC +
Preference number: 3 (lower is better)
Translates to: HKKIYGRGPLQGPPGEGPGTFSG*GPNSRP
Trigger: GGGTCTGGAATTTGGCCCCAAACCAGAGAATGTACC...TGGTCCCTCTCCCGGAGGCCCTTGTAGAGGGCCACGTCCATAAATTTTCTTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
3UTR-3UTR CAA 90 bp TCCTTTGTCGCCACTGAGACAGTGCAAAGGTTACAATGCGCGTGTCGTCTCCTTTTCCTGCCAGGAGACTaGGGTTTGGGGACAGTCACT +
Preference number: 3 (lower is better)
Translates to: SFVATETVQRLQCACRLLFLPGD*GLGTVT
Trigger: AGTGACTGTCCCCAAACCCAAGTCTCCTGGCAGGAA...AAGGAGACGACACGCGCATTGTAACCTTTGCACTGTCTCAGTGGCGACAAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
3UTR-3UTR CAA 90 bp CCAATGCAGCTGCTCACAGGTCCTGTTCTGGGATTGAAGACCAAGACACAGCTACACCAGGGCCGCATCTaGTCCCCATTACCACTTCTT +
Preference number: 3 (lower is better)
Translates to: PMQLLTGPVLGLKTKTQLHQGRI*SPLPLL
Trigger: AAGAAGTGGTAATGGGGACAAGATGCGGCCCTGGTG...TAGCTGTGTCTTGGTCTTCAATCCCAGAACAGGACCTGTGAGCAGCTGCATTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
3UTR-3UTR CAA 90 bp ACCCAGAGCCCTGCCTGCTGTTCCCCTATCCAATGCACACTTTTTGGCCTCATTGGCCCTCCACCTCACTaGTCTCTCATTAAGATAGGG +
Preference number: 3 (lower is better)
Translates to: TQSPACCSPIQCTLFGLIGPPPH*SLIKIG
Trigger: CCCTATCTTAATGAGAGACAAGTGAGGTGGAGGGCC...AATGAGGCCAAAAAGTGTGCATTGGATAGGGGAACAGCAGGCAGGGCTCTGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
3UTR GCA 72 bp TCCTTTGTCGCCACTGAGACAGTGCAAAGGTTACAATaGGCGTGTCGTCTCCTTGTGCTTCTCAGAGGGATG +
Preference number: 3 (lower is better)
Translates to: SFVATETVQRLQ*ACRLLVLLRGM
Trigger: CATCCCTCTGAGAAGCACAAGGAGACGACACGCGCATTGTAACCTTTGCACTGTCTCAGTGGCGACAAAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
3UTR CCA 72 bp GACCAGGGAGGGAGTAGAAACATAGAAGGTGGAACTTaGGGTGGGAGAATGGTTCTCAGAGACAAGAGGGGA +
Preference number: 3 (lower is better)
Translates to: DQGGSRNIEGGT*GGRMVLRDKRG
Trigger: TCCCCTCTTGTCTCTGAGAACCATTCTCCCACCCCAAGTTCCACCTTCTATGTTTCTACTCCCTCCCTGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
3UTR-3UTR CAA 90 bp GCTTCCTTTGTCGCCACTGAGACAGTGCAAAGGTTACAATGCGCGTGTCGTCTCGAGAAGCAAATGAAGTaGGGGAAGAGGATGTGGGAG +
Preference number: 3 (lower is better)
Translates to: ASFVATETVQRLQCACRLEKQMK*GKRMWE
Trigger: CTCCCACATCCTCTTCCCCAACTTCATTTGCTTCTC...GAGACGACACGCGCATTGTAACCTTTGCACTGTCTCAGTGGCGACAAAGGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
3UTR-3UTR CAA 90 bp CAGTGCAAAGGTTACAATGCGCGTGTCGTCTCCTTGTGCTTCTCAGAGGGATGTGAGAAGCAAATGAAGTaGGGGAAGAGGATGTGGGAG +
Preference number: 3 (lower is better)
Translates to: QCKGYNARVVSLCFSEGCEKQMK*GKRMWE
Trigger: CTCCCACATCCTCTTCCCCAACTTCATTTGCTTCTC...ACATCCCTCTGAGAAGCACAAGGAGACGACACGCGCATTGTAACCTTTGCACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
3UTR-3UTR CAA 90 bp ACTTATAGGTATCAGGATGTAGCCTACAGCACCAGGGCCGCATCTTGTCCCCATCTATGGATCTGCACTTaGATGCCTGCTTCGAAGGAC +
Preference number: 3 (lower is better)
Translates to: TYRYQDVAYSTRAASCPHLWICT*MPASKD
Trigger: GTCCTTCGAAGCAGGCATCAAAGTGCAGATCCATAG...ATGGGGACAAGATGCGGCCCTGGTGCTGTAGGCTACATCCTGATACCTATAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550558.5
3UTR GCA 72 bp TGTGATTCACAGCTTCCTTTGTCGCCACTGAGACAGTaGAAAGGTTACAATGCGCGTGTCGTCTCCTTGTGC +
Preference number: 3 (lower is better)
Translates to: CDSQLPLSPLRQ*KGYNARVVSLC
Trigger: GCACAAGGAGACGACACGCGCATTGTAACCTTTGCACTGTCTCAGTGGCGACAAAGGAAGCTGTGAATCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
3UTR-3UTR CAA 90 bp ATGATCTCTGAGGAAACTCTTAGGAACCAAGAGATTCCAAAGATCCTACAGCCTCACTGGGAAGGGCCTTaGGTGACTGGTGGCAGCAGA +
Preference number: 3 (lower is better)
Translates to: MISEETLRNQEIPKILQPHWEGP*VTGGSR
Trigger: TCTGCTGCCACCAGTCACCAAAGGCCCTTCCCAGTG...AGGCTGTAGGATCTTTGGAATCTCTTGGTTCCTAAGAGTTTCCTCAGAGATCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
3UTR GCA 72 bp CAGTGCAAAGGTTACAATGCGCGTGTCGTCTCCTTGTaGTTCTCAGAGGGATGTGTGTACACAGTACAGACA +
Preference number: 3 (lower is better)
Translates to: QCKGYNARVVSL*FSEGCVYTVQT
Trigger: TGTCTGTACTGTGTACACACATCCCTCTGAGAAGCACAAGGAGACGACACGCGCATTGTAACCTTTGCACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
ENST00000552633.2
3UTR-3UTR CAA 90 bp CGTCTCCTTGTGCTTCTCAGAGGGATGTGTGTACACAGTACAGACACCAGGGGAAAAATGCAGATGAGGTaGTTGAGAGAAGCAAATGAA +
Preference number: 3 (lower is better)
Translates to: RLLVLLRGMCVHSTDTRGKMQMR*LREANE
Trigger: TTCATTTGCTTCTCTCAACAACCTCATCTGCATTTT...TCCCCTGGTGTCTGTACTGTGTACACACATCCCTCTGAGAAGCACAAGGAGACG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
3UTR-3UTR CAA 90 bp GAAGCAAATGAAGTTGGGGAAGAGGATGTGGGAGAGTTCCATAAGAAAATTTATGGTACATTCTCTGGTTaGGGGCCAAATTCCAGACCC +
Preference number: 3 (lower is better)
Translates to: EANEVGEEDVGEFHKKIYGTFSG*GPNSRP
Trigger: GGGTCTGGAATTTGGCCCCAAACCAGAGAATGTACC...ATAAATTTTCTTATGGAACTCTCCCACATCCTCTTCCCCAACTTCATTTGCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
3UTR-3UTR CAA 90 bp ACAGTACAGACACCAGGGGAGAGAGTCCAACTCTTTATACAGGCGAAGGCATTCAAAATGCAGATGAGGTaGTTGAGAGAAGCAAATGAA +
Preference number: 3 (lower is better)
Translates to: TVQTPGERVQLFIQAKAFKMQMR*LREANE
Trigger: TTCATTTGCTTCTCTCAACAACCTCATCTGCATTTT...GAATGCCTTCGCCTGTATAAAGAGTTGGACTCTCTCCCCTGGTGTCTGTACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
3UTR-3UTR CAA 90 bp AAGTTGGGGAAGAGGATGTGGGAGAGTTCCATAAGAAAATTTATGGACGTGGCCTATTGCTCAGATTTGTaGAACTTCTTGGCCAGGTAC +
Preference number: 3 (lower is better)
Translates to: KLGKRMWESSIRKFMDVAYCSDL*NFLARY
Trigger: GTACCTGGCCAAGAAGTTCAACAAATCTGAGCAATA...GGCCACGTCCATAAATTTTCTTATGGAACTCTCCCACATCCTCTTCCCCAACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550558.5
CDS-3UTR TCA 90 bp CCCCCTCGCTCTCCTAGTCCTCCCCATCTAGGCCTTTGGTTCAGCGGCCTGCGGGAGAGAGGGGCAGCCTaGGGTCCCTTGCCCCGTTCT +
Preference number: 4 (lower is better)
Translates to: PPRSPSPPHLGLWFSGLRERGAA*GPLPRS
Trigger: AGAACGGGGCAAGGGACCTCAGGCTGCCCCTCTCTC...CCGCAGGCCGCTGAACCAAAGGCCTAGATGGGGAGGACTAGGAGAGCGAGGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000453327.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CCA 90 bp GGACGTGGCCCTCTACAAGGGCCTCCGGGAGAGGGACCAGTGAGGTTAGGCACTCCGTCCCACCCTTCATaGTCTTCAGCCGCGGCCGCC +
Preference number: 4 (lower is better)
Translates to: GRGPLQGPPGEGPVRLGTPSHPS*SSAAAA
Trigger: GGCGGCCGCGGCTGAAGACCATGAAGGGTGGGACGG...AGTGCCTAACCTCACTGGTCCCTCTCCCGGAGGCCCTTGTAGAGGGCCACGTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR GCA 90 bp GGACGTGGCCCTCTACAAGGGCCTCCGGGAGAGGGACCAGTGAGGTTAGGCACTATGTGGGCCAGGCCGTaGAGTGTGGAGCTGCTGGCG +
Preference number: 4 (lower is better)
Translates to: GRGPLQGPPGEGPVRLGTMWARP*SVELLA
Trigger: CGCCAGCAGCTCCACACTGCACGGCCTGGCCCACAT...AGTGCCTAACCTCACTGGTCCCTCTCCCGGAGGCCCTTGTAGAGGGCCACGTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR CCA 90 bp GGACGTGGCCCTCTACAAGGGCCTCCGGGAGAGGGACCAGTGAGGTTAGGCACTCCAGGCCGTGCAGTGTaGAGCTGCTGGCGAAGGCCT +
Preference number: 4 (lower is better)
Translates to: GRGPLQGPPGEGPVRLGTPGRAV*SCWRRP
Trigger: AGGCCTTCGCCAGCAGCTCCACACTGCACGGCCTGG...AGTGCCTAACCTCACTGGTCCCTCTCCCGGAGGCCCTTGTAGAGGGCCACGTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR CCA 90 bp CCCCCTCGCTCTCCTAGTCCTCCCCATCTAGGCCTTTGGTTCAGCGGCCTGCGGATCTGCCCCGGAGTGTaGGGAGTCCCCAGGGCAGAT +
Preference number: 4 (lower is better)
Translates to: PPRSPSPPHLGLWFSGLRICPGV*GVPRAD
Trigger: ATCTGCCCTGGGGACTCCCCACACTCCGGGGCAGAT...CCGCAGGCCGCTGAACCAAAGGCCTAGATGGGGAGGACTAGGAGAGCGAGGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000453327.7
ENST00000550558.5
ENST00000552438.5
ENST00000552633.2
CDS-3UTR GCA 90 bp ACTGCCCCAACTTCAGGAGTCGCCAATCCCCAGCTCCCTTCTGTCTCTGACACAAGGGAGGGCCGAGGGTaGCCGGGTTGGGGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: TAPTSGVANPQLPSVSDTREGRG*PGWGRG
Trigger: CCCTCTCCCCCAACCCGGGCACCCTCGGCCCTCCCT...TGTGTCAGAGACAGAAGGGAGCTGGGGATTGGCGACTCCTGAAGTTGGGGCAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR GCA 90 bp CCCCCTCGCTCTCCTAGTCCTCCCCATCTAGGCCTTTGGTTCAGCGGCCTGCGGCCAGCTCCAGGCCAATaGAGCTGCTCACAGGTCCTG +
Preference number: 4 (lower is better)
Translates to: PPRSPSPPHLGLWFSGLRPAPGQ*SCSQVL
Trigger: CAGGACCTGTGAGCAGCTGCATTGGCCTGGAGCTGG...CCGCAGGCCGCTGAACCAAAGGCCTAGATGGGGAGGACTAGGAGAGCGAGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR TCA 90 bp CATCCCACTGCCCCAACTTCAGGAGTCGCCAATCCCCAGCTCCCTTCTGTCTCTGTGGGGGCAGGTAGATaGGCCGCTGCTCCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: HPTAPTSGVANPQLPSVSVGAGR*AAAPGR
Trigger: CCTGCCAGGAGCAGCGGCTCATCTACCTGCCCCCAC...AGAGACAGAAGGGAGCTGGGGATTGGCGACTCCTGAAGTTGGGGCAGTGGGATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR GCA 90 bp CTATCTCTACAGCAACCCCTTCCCTGGGGATGCCACTGTCAGCTGGGCAGAGGGATGTGGGCCAGGCCGTaGAGTGTGGAGCTGCTGGCG +
Preference number: 4 (lower is better)
Translates to: LSLQQPLPWGCHCQLGRGMWARP*SVELLA
Trigger: CGCCAGCAGCTCCACACTGCACGGCCTGGCCCACAT...CCCTCTGCCCAGCTGACAGTGGCATCCCCAGGGAAGGGGTTGCTGTAGAGATAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR CCA 90 bp CTATCTCTACAGCAACCCCTTCCCTGGGGATGCCACTGTCAGCTGGGCAGAGGGTGGATGCTCACCGGCTaGACGCCACCCACCTCCTCC +
Preference number: 4 (lower is better)
Translates to: LSLQQPLPWGCHCQLGRGWMLTG*TPPTSS
Trigger: GGAGGAGGTGGGTGGCGTCCAGCCGGTGAGCATCCA...CCCTCTGCCCAGCTGACAGTGGCATCCCCAGGGAAGGGGTTGCTGTAGAGATAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR CCA 90 bp GGCTATCTCTACAGCAACCCCTTCCCTGGGGATGCCACTGTCAGCTGGGCAGAGCTGCTGGCGAAGGCCTaGATGCTCACCGGCTGGACG +
Preference number: 4 (lower is better)
Translates to: GYLYSNPFPGDATVSWAELLAKA*MLTGWT
Trigger: CGTCCAGCCGGTGAGCATCCAGGCCTTCGCCAGCAG...CTCTGCCCAGCTGACAGTGGCATCCCCAGGGAAGGGGTTGCTGTAGAGATAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR CCA 90 bp GGCAGCGTATGTCATCCCGGCAGGGTGGCCCCGAAGGCTCTCGCACGGGTTGTGCTCTGGAGTACAGTATaGGGCATCCCCTGGCATGTG +
Preference number: 4 (lower is better)
Translates to: GSVCHPGRVAPKALARVVLWSTV*GIPWHV
Trigger: CACATGCCAGGGGATGCCCCATACTGTACTCCAGAG...CACAACCCGTGCGAGAGCCTTCGGGGCCACCCTGCCGGGATGACATACGCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550558.5
CDS-3UTR CCA 90 bp CCCCCTCGCTCTCCTAGTCCTCCCCATCTAGGCCTTTGGTTCAGCGGCCTGCGGAGGCCACCAAGTCCATaGGTGAATGCCCCTCACTGG +
Preference number: 4 (lower is better)
Translates to: PPRSPSPPHLGLWFSGLRRPPSP*VNAPHW
Trigger: CCAGTGAGGGGCATTCACCCATGGACTTGGTGGCCT...CCGCAGGCCGCTGAACCAAAGGCCTAGATGGGGAGGACTAGGAGAGCGAGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000552438.5
CDS-3UTR GCA 90 bp ATAAGAAAATTTATGGACGTGGCCCTCTACAAGGGCCTCCGGGAGAGGGACCAGAGGGAGGGCCGAGGGTaGCCGGGTTGGGGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: IRKFMDVALYKGLRERDQREGRG*PGWGRG
Trigger: CCCTCTCCCCCAACCCGGGCACCCTCGGCCCTCCCT...CTGGTCCCTCTCCCGGAGGCCCTTGTAGAGGGCCACGTCCATAAATTTTCTTAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CCA 90 bp CCCCCTCGCTCTCCTAGTCCTCCCCATCTAGGCCTTTGGTTCAGCGGCCTGCGGCTCTGGAGTACAGTATaGGGCATCCCCTGGCATGTG +
Preference number: 4 (lower is better)
Translates to: PPRSPSPPHLGLWFSGLRLWSTV*GIPWHV
Trigger: CACATGCCAGGGGATGCCCCATACTGTACTCCAGAG...CCGCAGGCCGCTGAACCAAAGGCCTAGATGGGGAGGACTAGGAGAGCGAGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000453327.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CCA 90 bp CCCCCTCGCTCTCCTAGTCCTCCCCATCTAGGCCTTTGGTTCAGCGGCCTGCGGTCTTGGCCAGGTACTTaGCTGAGGCTTTGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: PPRSPSPPHLGLWFSGLRSWPGT*LRLCWG
Trigger: TCCCCAGCAAAGCCTCAGCCAAGTACCTGGCCAAGA...CCGCAGGCCGCTGAACCAAAGGCCTAGATGGGGAGGACTAGGAGAGCGAGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000453327.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CCA 90 bp CATCCCACTGCCCCAACTTCAGGAGTCGCCAATCCCCAGCTCCCTTCTGTCTCTCCCCATCTAGGCCTTTaGTTCAGCGGCCTGCGGGGC +
Preference number: 4 (lower is better)
Translates to: HPTAPTSGVANPQLPSVSPHLGL*FSGLRG
Trigger: GCCCCGCAGGCCGCTGAACCAAAGGCCTAGATGGGG...AGAGACAGAAGGGAGCTGGGGATTGGCGACTCCTGAAGTTGGGGCAGTGGGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CCA 90 bp GGCTATCTCTACAGCAACCCCTTCCCTGGGGATGCCACTGTCAGCTGGGCAGAGACGCGGTCCCCTACCTaGCACAGGAAGGCACCCAGT +
Preference number: 4 (lower is better)
Translates to: GYLYSNPFPGDATVSWAETRSPT*HRKAPS
Trigger: ACTGGGTGCCTTCCTGTGCCAGGTAGGGGACCGCGT...CTCTGCCCAGCTGACAGTGGCATCCCCAGGGAAGGGGTTGCTGTAGAGATAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000552438.5
CDS-3UTR TCA 90 bp ACTGCCCCAACTTCAGGAGTCGCCAATCCCCAGCTCCCTTCTGTCTCTGACACAGAGAGAGGGGCAGCCTaGGGTCCCTTGCCCCGTTCT +
Preference number: 4 (lower is better)
Translates to: TAPTSGVANPQLPSVSDTERGAA*GPLPRS
Trigger: AGAACGGGGCAAGGGACCTCAGGCTGCCCCTCTCTC...TGTGTCAGAGACAGAAGGGAGCTGGGGATTGGCGACTCCTGAAGTTGGGGCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR TCA 90 bp CATCCCACTGCCCCAACTTCAGGAGTCGCCAATCCCCAGCTCCCTTCTGTCTCTGCAAGTCAGGGTAGCTaGGCTGGGACAGCCGCACAG +
Preference number: 4 (lower is better)
Translates to: HPTAPTSGVANPQLPSVSASQGS*AGTAAQ
Trigger: CTGTGCGGCTGTCCCAGCTCAGCTACCCTGACTTGC...AGAGACAGAAGGGAGCTGGGGATTGGCGACTCCTGAAGTTGGGGCAGTGGGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552438.5
CDS-3UTR GCA 90 bp GCCTTTGGTGACTGGTGGCAGCAGAATGTAGATGGACACTCAGATGGCAGACAGGGGGAGGGGAGAGGGTaGGCGTGCGCGCCTACGAGT +
Preference number: 4 (lower is better)
Translates to: AFGDWWQQNVDGHSDGRQGEGRG*ACAPTS
Trigger: ACTCGTAGGCGCGCACGCGCACCCTCTCCCCTCCCC...CTGTCTGCCATCTGAGTGTCCATCTACATTCTGCTGCCACCAGTCACCAAAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000228468.8
CDS-3UTR GCA 90 bp TCCAGCTCCAGGCCAATGCAGCTGCTCACAGGTCCTGTTCTGGGATTGAAGACCGCACAGGGCCCACAGTaGCCGCTTCAGAGACAGCCG +
Preference number: 4 (lower is better)
Translates to: SSSRPMQLLTGPVLGLKTAQGPQ*PLQRQP
Trigger: CGGCTGTCTCTGAAGCGGGCACTGTGGGCCCTGTGC...GGTCTTCAATCCCAGAACAGGACCTGTGAGCAGCTGCATTGGCCTGGAGCTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR GCA 90 bp ACAGCTTCCTTTGTCGCCACTGAGACAGTGCAAAGGTTACAATGCGCGTGTCGTAGGGAGGGCCGAGGGTaGCCGGGTTGGGGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: TASFVATETVQRLQCACRREGRG*PGWGRG
Trigger: CCCTCTCCCCCAACCCGGGCACCCTCGGCCCTCCCT...ACGACACGCGCATTGTAACCTTTGCACTGTCTCAGTGGCGACAAAGGAAGCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR GCA 90 bp CTATCTCTACAGCAACCCCTTCCCTGGGGATGCCACTGTCAGCTGGGCAGAGGGCCAGCTCCAGGCCAATaGAGCTGCTCACAGGTCCTG +
Preference number: 4 (lower is better)
Translates to: LSLQQPLPWGCHCQLGRGPAPGQ*SCSQVL
Trigger: CAGGACCTGTGAGCAGCTGCATTGGCCTGGAGCTGG...CCCTCTGCCCAGCTGACAGTGGCATCCCCAGGGAAGGGGTTGCTGTAGAGATAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR CCA 90 bp GGCTATCTCTACAGCAACCCCTTCCCTGGGGATGCCACTGTCAGCTGGGCAGAGGTATGGGGCATCCCCTaGCATGTGCACCATGCGGCA +
Preference number: 4 (lower is better)
Translates to: GYLYSNPFPGDATVSWAEVWGIP*HVHHAA
Trigger: TGCCGCATGGTGCACATGCCAGGGGATGCCCCATAC...CTCTGCCCAGCTGACAGTGGCATCCCCAGGGAAGGGGTTGCTGTAGAGATAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CCA 90 bp CCCCCTCGCTCTCCTAGTCCTCCCCATCTAGGCCTTTGGTTCAGCGGCCTGCGGCCGCACTGCTCCTTTTaGCCTCCTTCTGGCATTTTC +
Preference number: 4 (lower is better)
Translates to: PPRSPSPPHLGLWFSGLRPHCSF*PPSGIF
Trigger: GAAAATGCCAGAAGGAGGCCAAAAGGAGCAGTGCGG...CCGCAGGCCGCTGAACCAAAGGCCTAGATGGGGAGGACTAGGAGAGCGAGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000453327.7
ENST00000550558.5
ENST00000552438.5
ENST00000552633.2
CDS-3UTR TCA 90 bp GGCTATCTCTACAGCAACCCCTTCCCTGGGGATGCCACTGTCAGCTGGGCAGAGCAGTTCCATCCTTGTTaGGGGGATCCTGAGGGGGCT +
Preference number: 4 (lower is better)
Translates to: GYLYSNPFPGDATVSWAEQFHPC*GDPEGA
Trigger: AGCCCCCTCAGGATCCCCTCAACAAGGATGGAACTG...CTCTGCCCAGCTGACAGTGGCATCCCCAGGGAAGGGGTTGCTGTAGAGATAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR TCA 90 bp CGTCTCCTTGTGCTTCTCAGAGGGATGTGTGTACACAGTACAGACACCAGGGGAGTGGGGGCAGGTAGATaGGCCGCTGCTCCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: RLLVLLRGMCVHSTDTRGVGAGR*AAAPGR
Trigger: CCTGCCAGGAGCAGCGGCTCATCTACCTGCCCCCAC...TCCCCTGGTGTCTGTACTGTGTACACACATCCCTCTGAGAAGCACAAGGAGACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR TCA 90 bp TGTGCTTCTCAGAGGGATGTGTGTACACAGTACAGACACCAGGGGAGAGAGTCCGTGGGGGCAGGTAGATaGGCCGCTGCTCCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: CASQRDVCTQYRHQGRESVGAGR*AAAPGR
Trigger: CCTGCCAGGAGCAGCGGCTCATCTACCTGCCCCCAC...GGACTCTCTCCCCTGGTGTCTGTACTGTGTACACACATCCCTCTGAGAAGCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR TCA 90 bp CTATCTCTACAGCAACCCCTTCCCTGGGGATGCCACTGTCAGCTGGGCAGAGGGCGATGCGGCAGGCAGTaGTGCTGTAGGAGTCGAAGA +
Preference number: 4 (lower is better)
Translates to: LSLQQPLPWGCHCQLGRGRCGRQ*CCRSRR
Trigger: TCTTCGACTCCTACAGCATCACTGCCTGCCGCATCG...CCCTCTGCCCAGCTGACAGTGGCATCCCCAGGGAAGGGGTTGCTGTAGAGATAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR GCA 90 bp GGCTATCTCTACAGCAACCCCTTCCCTGGGGATGCCACTGTCAGCTGGGCAGAGGAGGACCTCAGCTTCTaGCTGTCAGCATCCCACTGC +
Preference number: 4 (lower is better)
Translates to: GYLYSNPFPGDATVSWAEEDLSF*LSASHC
Trigger: GCAGTGGGATGCTGACAGGCAGAAGCTGAGGTCCTC...CTCTGCCCAGCTGACAGTGGCATCCCCAGGGAAGGGGTTGCTGTAGAGATAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CCA 90 bp AAGACTCCTTCCTTACCACAGACAAGAGGAAAGATCTGCCCCGGAGTGTGGGGACCGTCCCACCCTTCATaGTCTTCAGCCGCGGCCGCC +
Preference number: 4 (lower is better)
Translates to: KTPSLPQTRGKICPGVWGPSHPS*SSAAAA
Trigger: GGCGGCCGCGGCTGAAGACCATGAAGGGTGGGACGG...TCCCCACACTCCGGGGCAGATCTTTCCTCTTGTCTGTGGTAAGGAAGGAGTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000453327.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CCA 90 bp GAGACAGTGCAAAGGTTACAATGCGCGTGTCGTCTCCTTGTGCTTCTCAGAGGGGTCATCCCGGCAGGGTaGCCCCGAAGGCTCTCGCAC +
Preference number: 4 (lower is better)
Translates to: ETVQRLQCACRLLVLLRGVIPAG*PRRLSH
Trigger: GTGCGAGAGCCTTCGGGGCCACCCTGCCGGGATGAC...CCCTCTGAGAAGCACAAGGAGACGACACGCGCATTGTAACCTTTGCACTGTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
ENST00000552633.2
CDS-3UTR CCA 90 bp AAGACTCCTTCCTTACCACAGACAAGAGGAAAGATCTGCCCCGGAGTGTGGGGAGTCATCCCGGCAGGGTaGCCCCGAAGGCTCTCGCAC +
Preference number: 4 (lower is better)
Translates to: KTPSLPQTRGKICPGVWGVIPAG*PRRLSH
Trigger: GTGCGAGAGCCTTCGGGGCCACCCTGCCGGGATGAC...TCCCCACACTCCGGGGCAGATCTTTCCTCTTGTCTGTGGTAAGGAAGGAGTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000453327.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CCA 90 bp ACTGCCCCAACTTCAGGAGTCGCCAATCCCCAGCTCCCTTCTGTCTCTGACACACCCTTCTCCCTGAGCTaGACGCTAACCAGCCCGGTC +
Preference number: 4 (lower is better)
Translates to: TAPTSGVANPQLPSVSDTPFSLS*TLTSPV
Trigger: GACCGGGCTGGTTAGCGTCCAGCTCAGGGAGAAGGG...TGTGTCAGAGACAGAAGGGAGCTGGGGATTGGCGACTCCTGAAGTTGGGGCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CCA 90 bp CCCCCTCGCTCTCCTAGTCCTCCCCATCTAGGCCTTTGGTTCAGCGGCCTGCGGGAAAATTTATGGACGTaGCCCTCTACAAGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: PPRSPSPPHLGLWFSGLRENLWT*PSTRAS
Trigger: GGAGGCCCTTGTAGAGGGCCACGTCCATAAATTTTC...CCGCAGGCCGCTGAACCAAAGGCCTAGATGGGGAGGACTAGGAGAGCGAGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
3UTR CAA 72 bp CCGGTCTTTAATGGGATGGTGAGGAAGGGCTGCCTCTaGGGATTTCTCTCCAGCAGCTGTGGGGTGGGGGTG +
Preference number: 4 (lower is better)
Translates to: PVFNGMVRKGCL*GFLSSSCGVGV
Trigger: CACCCCCACCCCACAGCTGCTGGAGAGAAATCCCAAGAGGCAGCCCTTCCTCACCATCCCATTAAAGACCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
3UTR CAA 72 bp TGTCTTTTGACGTCGTCCAGGCTGAGGGCCACGCCCTaGTCCGCACTGCTCCTTTTGGCCTCCTTCTGGCAT +
Preference number: 4 (lower is better)
Translates to: CLLTSSRLRATP*SALLLLASFWH
Trigger: ATGCCAGAAGGAGGCCAAAAGGAGCAGTGCGGACAAGGGCGTGGCCCTCAGCCTGGACGACGTCAAAAGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550558.5
CDS-3UTR TCA 90 bp GGCTATCTCTACAGCAACCCCTTCCCTGGGGATGCCACTGTCAGCTGGGCAGAGCCTCGTCGAGCTTGGTaGCATGGTGGTAGTGGAAGT +
Preference number: 4 (lower is better)
Translates to: GYLYSNPFPGDATVSWAEPRRAW*HGGSGS
Trigger: ACTTCCACTACCACCATGTCACCAAGCTCGACGAGG...CTCTGCCCAGCTGACAGTGGCATCCCCAGGGAAGGGGTTGCTGTAGAGATAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR TCA 90 bp CTATGGTCAAGACTCCTTCCTTACCACAGACAAGAGGAAAGATCTGCCCCGGAGGTGGGGGCAGGTAGATaGGCCGCTGCTCCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: LWSRLLPYHRQEERSAPEVGAGR*AAAPGR
Trigger: CCTGCCAGGAGCAGCGGCTCATCTACCTGCCCCCAC...CTCCGGGGCAGATCTTTCCTCTTGTCTGTGGTAAGGAAGGAGTCTTGACCATAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000453327.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR TCA 90 bp GCTTCCTTTGTCGCCACTGAGACAGTGCAAAGGTTACAATGCGCGTGTCGTCTCGAGAGAGGGGCAGCCTaGGGTCCCTTGCCCCGTTCT +
Preference number: 4 (lower is better)
Translates to: ASFVATETVQRLQCACRLERGAA*GPLPRS
Trigger: AGAACGGGGCAAGGGACCTCAGGCTGCCCCTCTCTC...GAGACGACACGCGCATTGTAACCTTTGCACTGTCTCAGTGGCGACAAAGGAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR TCA 90 bp CTATCTCTACAGCAACCCCTTCCCTGGGGATGCCACTGTCAGCTGGGCAGAGGGGTGAGAGAGTGGGGCTaGGGTTTTAGTTCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: LSLQQPLPWGCHCQLGRGVREWG*GFSSCQ
Trigger: CTGGCAGGAACTAAAACCTCAGCCCCACTCTCTCAC...CCCTCTGCCCAGCTGACAGTGGCATCCCCAGGGAAGGGGTTGCTGTAGAGATAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR TCA 90 bp CCCCCTCGCTCTCCTAGTCCTCCCCATCTAGGCCTTTGGTTCAGCGGCCTGCGGACTTTCCATAGCGTGTaGAGACCTGTTTCTCACCCT +
Preference number: 4 (lower is better)
Translates to: PPRSPSPPHLGLWFSGLRTFHSV*RPVSHP
Trigger: AGGGTGAGAAACAGGTCTTCACACGCTATGGAAAGT...CCGCAGGCCGCTGAACCAAAGGCCTAGATGGGGAGGACTAGGAGAGCGAGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000453327.7
CDS-3UTR GCA 90 bp AGTGCAAAGGTTACAATGCGCGTGTCGTCTCCTTGTGCTTCTCAGAGGGATGTGGGGAGAGGGTGCGCGTaGGCGCCTACGAGTGTCTGC +
Preference number: 4 (lower is better)
Translates to: SAKVTMRVSSPCASQRDVGRGCA*APTSVC
Trigger: GCAGACACTCGTAGGCGCGCACGCGCACCCTCTCCC...CACATCCCTCTGAGAAGCACAAGGAGACGACACGCGCATTGTAACCTTTGCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228468.8
CDS-3UTR GCA 90 bp GAGACAGTGCAAAGGTTACAATGCGCGTGTCGTCTCCTTGTGCTTCTCAGAGGGTGGCGAAGGCCTGGATaGTCACCGGCTGGACGCCAC +
Preference number: 4 (lower is better)
Translates to: ETVQRLQCACRLLVLLRGWRRPG*SPAGRH
Trigger: GTGGCGTCCAGCCGGTGAGCATCCAGGCCTTCGCCA...CCCTCTGAGAAGCACAAGGAGACGACACGCGCATTGTAACCTTTGCACTGTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR GCA 90 bp GCCTTTGGTGACTGGTGGCAGCAGAATGTAGATGGACACTCAGATGGCAGACAGTGGCGAAGGCCTGGATaGTCACCGGCTGGACGCCAC +
Preference number: 4 (lower is better)
Translates to: AFGDWWQQNVDGHSDGRQWRRPG*SPAGRH
Trigger: GTGGCGTCCAGCCGGTGAGCATCCAGGCCTTCGCCA...CTGTCTGCCATCTGAGTGTCCATCTACATTCTGCTGCCACCAGTCACCAAAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR GCA 90 bp GAGGACTCTATGGTCAAGACTCCTTCCTTACCACAGACAAGAGGAAAGATCTGCAGGGAGGGCCGAGGGTaGCCGGGTTGGGGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: EDSMVKTPSLPQTRGKICREGRG*PGWGRG
Trigger: CCCTCTCCCCCAACCCGGGCACCCTCGGCCCTCCCT...GCAGATCTTTCCTCTTGTCTGTGGTAAGGAAGGAGTCTTGACCATAGAGTCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CCA 90 bp GCTTCTCAGAGGGATGTGTGTACACAGTACAGACACCAGGGGAGAGAGTCCAACTGGATGCTCACCGGCTaGACGCCACCCACCTCCTCC +
Preference number: 4 (lower is better)
Translates to: ASQRDVCTQYRHQGRESNWMLTG*TPPTSS
Trigger: GGAGGAGGTGGGTGGCGTCCAGCCGGTGAGCATCCA...GTTGGACTCTCTCCCCTGGTGTCTGTACTGTGTACACACATCCCTCTGAGAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR CCA 90 bp CAGTGCAAAGGTTACAATGCGCGTGTCGTCTCCTTGTGCTTCTCAGAGGGATGTCCGTCCCACCCTTCATaGTCTTCAGCCGCGGCCGCC +
Preference number: 4 (lower is better)
Translates to: QCKGYNARVVSLCFSEGCPSHPS*SSAAAA
Trigger: GGCGGCCGCGGCTGAAGACCATGAAGGGTGGGACGG...ACATCCCTCTGAGAAGCACAAGGAGACGACACGCGCATTGTAACCTTTGCACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CCA 90 bp GGTTACAATGCGCGTGTCGTCTCCTTGTGCTTCTCAGAGGGATGTGTGTACACAGTCATCCCGGCAGGGTaGCCCCGAAGGCTCTCGCAC +
Preference number: 4 (lower is better)
Translates to: GYNARVVSLCFSEGCVYTVIPAG*PRRLSH
Trigger: GTGCGAGAGCCTTCGGGGCCACCCTGCCGGGATGAC...TGTGTACACACATCCCTCTGAGAAGCACAAGGAGACGACACGCGCATTGTAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
ENST00000552633.2
CDS-3UTR CCA 90 bp AGTACAGACACCAGGGGAGAGAGTCCAACTCACAGACAAGAGGAAAGATCTGCCGTCATCCCGGCAGGGTaGCCCCGAAGGCTCTCGCAC +
Preference number: 4 (lower is better)
Translates to: STDTRGESPTHRQEERSAVIPAG*PRRLSH
Trigger: GTGCGAGAGCCTTCGGGGCCACCCTGCCGGGATGAC...GGCAGATCTTTCCTCTTGTCTGTGAGTTGGACTCTCTCCCCTGGTGTCTGTACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552633.2
CDS-3UTR CCA 90 bp ACCCAGAGCCCTGCCTGCTGTTCCCCTATCCAATGCACACTTTTTGGCCTCATTCCCCATCTAGGCCTTTaGTTCAGCGGCCTGCGGGGC +
Preference number: 4 (lower is better)
Translates to: TQSPACCSPIQCTLFGLIPHLGL*FSGLRG
Trigger: GCCCCGCAGGCCGCTGAACCAAAGGCCTAGATGGGG...AATGAGGCCAAAAAGTGTGCATTGGATAGGGGAACAGCAGGCAGGGCTCTGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR CCA 90 bp CATAAGAAAATTTATGGACGTGGCCCTCTACAAGGGCCTCCGGGAGAGGGACCACCCCATCTAGGCCTTTaGTTCAGCGGCCTGCGGGGC +
Preference number: 4 (lower is better)
Translates to: HKKIYGRGPLQGPPGEGPPHLGL*FSGLRG
Trigger: GCCCCGCAGGCCGCTGAACCAAAGGCCTAGATGGGG...TGGTCCCTCTCCCGGAGGCCCTTGTAGAGGGCCACGTCCATAAATTTTCTTATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CCA 90 bp GGACGTGGCCCTCTACAAGGGCCTCCGGGAGAGGGACCAGTGAGGTTAGGCACTGCCTTTGGTGACTGGTaGCAGCAGAATGTAGATGGA +
Preference number: 4 (lower is better)
Translates to: GRGPLQGPPGEGPVRLGTAFGDW*QQNVDG
Trigger: TCCATCTACATTCTGCTGCCACCAGTCACCAAAGGC...AGTGCCTAACCTCACTGGTCCCTCTCCCGGAGGCCCTTGTAGAGGGCCACGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CCA 90 bp ACTGCCCCAACTTCAGGAGTCGCCAATCCCCAGCTCCCTTCTGTCTCTGACACACAGCAACCCCTTCCCTaGGGATGCCACTGTCAGCTG +
Preference number: 4 (lower is better)
Translates to: TAPTSGVANPQLPSVSDTQQPLP*GCHCQL
Trigger: CAGCTGACAGTGGCATCCCCAGGGAAGGGGTTGCTG...TGTGTCAGAGACAGAAGGGAGCTGGGGATTGGCGACTCCTGAAGTTGGGGCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CCA 90 bp GGACGTGGCCCTCTACAAGGGCCTCCGGGAGAGGGACCAGTGAGGTTAGGCACTCATCCAGTCCCAGCATaGGGGCCAAATAAAGCAAGT +
Preference number: 4 (lower is better)
Translates to: GRGPLQGPPGEGPVRLGTHPVPA*GPNKAS
Trigger: ACTTGCTTTATTTGGCCCCCATGCTGGGACTGGATG...AGTGCCTAACCTCACTGGTCCCTCTCCCGGAGGCCCTTGTAGAGGGCCACGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552438.5
CDS-3UTR TCA 90 bp TCCAGCTCCAGGCCAATGCAGCTGCTCACAGGTCCTGTTCTGGGATTGAAGACCTCTCATACCTGTTGTTaGGCAGGGCCAGCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: SSSRPMQLLTGPVLGLKTSHTCC*AGPAAP
Trigger: GGGAGCTGCTGGCCCTGCTCAACAACAGGTATGAGA...GGTCTTCAATCCCAGAACAGGACCTGTGAGCAGCTGCATTGGCCTGGAGCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR GCA 90 bp CATAAGAAAATTTATGGACGTGGCCCTCTACAAGGGCCTCCGGGAGAGGGACCACTCAGCCCTGGGATCTaGAGGGATCCATCGTCCGGC +
Preference number: 4 (lower is better)
Translates to: HKKIYGRGPLQGPPGEGPLSPGI*RDPSSG
Trigger: GCCGGACGATGGATCCCTGCAGATCCCAGGGCTGAG...TGGTCCCTCTCCCGGAGGCCCTTGTAGAGGGCCACGTCCATAAATTTTCTTATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228468.8
ENST00000447966.7
CDS-3UTR GCA 90 bp GTGTCGTCTCCTTGTGCTTCTCAGAGGGATGTGTGTACACAGTACAGACACCAGTGGCGAAGGCCTGGATaGTCACCGGCTGGACGCCAC +
Preference number: 4 (lower is better)
Translates to: VSSPCASQRDVCTQYRHQWRRPG*SPAGRH
Trigger: GTGGCGTCCAGCCGGTGAGCATCCAGGCCTTCGCCA...CTGGTGTCTGTACTGTGTACACACATCCCTCTGAGAAGCACAAGGAGACGACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR GCA 90 bp GCTTCCTTTGTCGCCACTGAGACAGTGCAAAGGTTACAATGCGCGTGTCGTCTCCGTGCAGTGTGGAGCTaGTGGCGAAGGCCTGGATGC +
Preference number: 4 (lower is better)
Translates to: ASFVATETVQRLQCACRLRAVWS*WRRPGC
Trigger: GCATCCAGGCCTTCGCCAGCAGCTCCACACTGCACG...GAGACGACACGCGCATTGTAACCTTTGCACTGTCTCAGTGGCGACAAAGGAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR GCA 90 bp CAGTGCAAAGGTTACAATGCGCGTGTCGTCTCCTTGTGCTTCTCAGAGGGATGTATGTGGGCCAGGCCGTaGAGTGTGGAGCTGCTGGCG +
Preference number: 4 (lower is better)
Translates to: QCKGYNARVVSLCFSEGCMWARP*SVELLA
Trigger: CGCCAGCAGCTCCACACTGCACGGCCTGGCCCACAT...ACATCCCTCTGAGAAGCACAAGGAGACGACACGCGCATTGTAACCTTTGCACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR GCA 90 bp GGTTACAATGCGCGTGTCGTCTCCTTGTGCTTCTCAGAGGGATGTGTGTACACAGCACAGGGCCCACAGTaGCCGCTTCAGAGACAGCCG +
Preference number: 4 (lower is better)
Translates to: GYNARVVSLCFSEGCVYTAQGPQ*PLQRQP
Trigger: CGGCTGTCTCTGAAGCGGGCACTGTGGGCCCTGTGC...TGTGTACACACATCCCTCTGAGAAGCACAAGGAGACGACACGCGCATTGTAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR CCA 90 bp ATGCGCGTGTCGTCTCCTTGTGCTTCTCAGAGGGATGTGTGTACACAGTACAGATGGATGCTCACCGGCTaGACGCCACCCACCTCCTCC +
Preference number: 4 (lower is better)
Translates to: MRVSSPCASQRDVCTQYRWMLTG*TPPTSS
Trigger: GGAGGAGGTGGGTGGCGTCCAGCCGGTGAGCATCCA...TCTGTACTGTGTACACACATCCCTCTGAGAAGCACAAGGAGACGACACGCGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR CCA 90 bp TTGTGCTTCTCAGAGGGATGTGTGTACACAGTACAGACACCAGGGGAGAGAGTCCCAGGCCGTGCAGTGTaGAGCTGCTGGCGAAGGCCT +
Preference number: 4 (lower is better)
Translates to: LCFSEGCVYTVQTPGERVPGRAV*SCWRRP
Trigger: AGGCCTTCGCCAGCAGCTCCACACTGCACGGCCTGG...GACTCTCTCCCCTGGTGTCTGTACTGTGTACACACATCCCTCTGAGAAGCACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR CCA 90 bp ATGCGCGTGTCGTCTCCTTGTGCTTCTCAGAGGGATGTGTGTACACAGTACAGACCAGGCCGTGCAGTGTaGAGCTGCTGGCGAAGGCCT +
Preference number: 4 (lower is better)
Translates to: MRVSSPCASQRDVCTQYRPGRAV*SCWRRP
Trigger: AGGCCTTCGCCAGCAGCTCCACACTGCACGGCCTGG...TCTGTACTGTGTACACACATCCCTCTGAGAAGCACAAGGAGACGACACGCGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR CCA 90 bp TTTTCCTCGTCGGCACAGCTTGTGCTTAATGACCTCGTAGGCGTAGTCAAAGAGCCGTCCCACCCTTCATaGTCTTCAGCCGCGGCCGCC +
Preference number: 4 (lower is better)
Translates to: FSSSAQLVLNDLVGVVKEPSHPS*SSAAAA
Trigger: GGCGGCCGCGGCTGAAGACCATGAAGGGTGGGACGG...CTCTTTGACTACGCCTACGAGGTCATTAAGCACAAGCTGTGCCGACGAGGAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550558.5
CDS-3UTR CCA 90 bp CATCCCACTGCCCCAACTTCAGGAGTCGCCAATCCCCAGCTCCCTTCTGTCTCTCACACGCAGTACTCCTaGTCCTTCTCCACCAGGAAG +
Preference number: 4 (lower is better)
Translates to: HPTAPTSGVANPQLPSVSHTQYS*SFSTRK
Trigger: CTTCCTGGTGGAGAAGGACCAGGAGTACTGCGTGTG...AGAGACAGAAGGGAGCTGGGGATTGGCGACTCCTGAAGTTGGGGCAGTGGGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CCA 90 bp TTGTGCTTCTCAGAGGGATGTGTGTACACAGTACAGACACCAGGGGAGAGAGTCCCCCATCTAGGCCTTTaGTTCAGCGGCCTGCGGGGC +
Preference number: 4 (lower is better)
Translates to: LCFSEGCVYTVQTPGERVPHLGL*FSGLRG
Trigger: GCCCCGCAGGCCGCTGAACCAAAGGCCTAGATGGGG...GACTCTCTCCCCTGGTGTCTGTACTGTGTACACACATCCCTCTGAGAAGCACAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
ENST00000552633.2
CDS-3UTR CCA 90 bp GCTTCTCAGAGGGATGTGTGTACACAGTACAGACACCAGGGGAGAGAGTCCAACATCTGCCCCGGAGTGTaGGGAGTCCCCAGGGCAGAT +
Preference number: 4 (lower is better)
Translates to: ASQRDVCTQYRHQGRESNICPGV*GVPRAD
Trigger: ATCTGCCCTGGGGACTCCCCACACTCCGGGGCAGAT...GTTGGACTCTCTCCCCTGGTGTCTGTACTGTGTACACACATCCCTCTGAGAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
ENST00000552633.2
CDS-3UTR CCA 90 bp AAGACTCCTTCCTTACCACAGACAAGAGGAAAGATCTGCCCCGGAGTGTGGGGAATCTGCCCCGGAGTGTaGGGAGTCCCCAGGGCAGAT +
Preference number: 4 (lower is better)
Translates to: KTPSLPQTRGKICPGVWGICPGV*GVPRAD
Trigger: ATCTGCCCTGGGGACTCCCCACACTCCGGGGCAGAT...TCCCCACACTCCGGGGCAGATCTTTCCTCTTGTCTGTGGTAAGGAAGGAGTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000453327.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CCA 90 bp ACTTGGCTTAGTGTCCAGGGTAGACCTCCATCCCCTGGGTGGGGGCTATCTCTACCTTCCACCCCTCACTaGGAAGGGCCTTTGGTGACT +
Preference number: 4 (lower is better)
Translates to: TWLSVQGRPPSPGWGLSLPSTPH*EGPLVT
Trigger: AGTCACCAAAGGCCCTTCCCAGTGAGGGGTGGAAGG...TAGAGATAGCCCCCACCCAGGGGATGGAGGTCTACCCTGGACACTAAGCCAAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CCA 90 bp AAGACTCCTTCCTTACCACAGACAAGAGGAAAGATCTGCCCCGGAGTGTGGGGACCCTTCTCCCTGAGCTaGACGCTAACCAGCCCGGTC +
Preference number: 4 (lower is better)
Translates to: KTPSLPQTRGKICPGVWGPFSLS*TLTSPV
Trigger: GACCGGGCTGGTTAGCGTCCAGCTCAGGGAGAAGGG...TCCCCACACTCCGGGGCAGATCTTTCCTCTTGTCTGTGGTAAGGAAGGAGTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CCA 90 bp ACTGCCCCAACTTCAGGAGTCGCCAATCCCCAGCTCCCTTCTGTCTCTGACACAGTGAGGAAAGGGGGCTaGGCACCCAGAAGGAGGAAA +
Preference number: 4 (lower is better)
Translates to: TAPTSGVANPQLPSVSDTVRKGG*APRRRK
Trigger: TTTCCTCCTTCTGGGTGCCCAGCCCCCTTTCCTCAC...TGTGTCAGAGACAGAAGGGAGCTGGGGATTGGCGACTCCTGAAGTTGGGGCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR TCA 90 bp ATGCGCGTGTCGTCTCCTTGTGCTTCTCAGAGGGATGTGTGTACACAGTACAGAGCAGGGAAGGTAAGCTaGGAGGCAGCCACCTCGTCG +
Preference number: 4 (lower is better)
Translates to: MRVSSPCASQRDVCTQYRAGKVS*EAATSS
Trigger: CGACGAGGTGGCTGCCTCTCAGCTTACCTTCCCTGC...TCTGTACTGTGTACACACATCCCTCTGAGAAGCACAAGGAGACGACACGCGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR TCA 90 bp ACAGCTTCCTTTGTCGCCACTGAGACAGTGCAAAGGTTACAATGCGCGTGTCGTGCAGGGAAGGTAAGCTaGGAGGCAGCCACCTCGTCG +
Preference number: 4 (lower is better)
Translates to: TASFVATETVQRLQCACRAGKVS*EAATSS
Trigger: CGACGAGGTGGCTGCCTCTCAGCTTACCTTCCCTGC...ACGACACGCGCATTGTAACCTTTGCACTGTCTCAGTGGCGACAAAGGAAGCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR TCA 90 bp TTGTGCTTCTCAGAGGGATGTGTGTACACAGTACAGACACCAGGGGAGAGAGTCGCAGGGAAGGTAAGCTaGGAGGCAGCCACCTCGTCG +
Preference number: 4 (lower is better)
Translates to: LCFSEGCVYTVQTPGERVAGKVS*EAATSS
Trigger: CGACGAGGTGGCTGCCTCTCAGCTTACCTTCCCTGC...GACTCTCTCCCCTGGTGTCTGTACTGTGTACACACATCCCTCTGAGAAGCACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR TCA 90 bp AAGAATGGGATAGAGGCAGAGAGAGGACTCTATGGTCAAGACTCCTTCCTTACCGTGGGGGCAGGTAGATaGGCCGCTGCTCCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: KNGIEAERGLYGQDSFLTVGAGR*AAAPGR
Trigger: CCTGCCAGGAGCAGCGGCTCATCTACCTGCCCCCAC...GGTAAGGAAGGAGTCTTGACCATAGAGTCCTCTCTCTGCCTCTATCCCATTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000453327.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR TCA 90 bp TCTATGGTCAAGACTCCTTCCTTACCACAGACAAGAGGAAAGATCTGCCCCGGAGAGAGAGGGGCAGCCTaGGGTCCCTTGCCCCGTTCT +
Preference number: 4 (lower is better)
Translates to: SMVKTPSLPQTRGKICPGERGAA*GPLPRS
Trigger: AGAACGGGGCAAGGGACCTCAGGCTGCCCCTCTCTC...TCCGGGGCAGATCTTTCCTCTTGTCTGTGGTAAGGAAGGAGTCTTGACCATAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000453327.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR TCA 90 bp CATCCCACTGCCCCAACTTCAGGAGTCGCCAATCCCCAGCTCCCTTCTGTCTCTAGATTCCACATGGTGTaGGAGAGTGGGGCTGAGGTT +
Preference number: 4 (lower is better)
Translates to: HPTAPTSGVANPQLPSVSRFHMV*ESGAEV
Trigger: AACCTCAGCCCCACTCTCTCACACCATGTGGAATCT...AGAGACAGAAGGGAGCTGGGGATTGGCGACTCCTGAAGTTGGGGCAGTGGGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR TCA 90 bp GTATGTCATCCCGGCAGGGTGGCCCCGAAGGCTCTCGCACGGGTTGTGTCTTTTCCCTCTGGGGAGGTATaGTCTCTGAGGAAACTCTTA +
Preference number: 4 (lower is better)
Translates to: VCHPGRVAPKALARVVSFPSGEV*SLRKLL
Trigger: TAAGAGTTTCCTCAGAGATCATACCTCCCCAGAGGG...AAAAGACACAACCCGTGCGAGAGCCTTCGGGGCCACCCTGCCGGGATGACATAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000550558.5
CDS-3UTR TCA 90 bp AAGACTCCTTCCTTACCACAGACAAGAGGAAAGATCTGCCCCGGAGTGTGGGGAGTAGGGTGCATCGCCTaGGCTCCTTTGCCACCTGCA +
Preference number: 4 (lower is better)
Translates to: KTPSLPQTRGKICPGVWGVGCIA*APLPPA
Trigger: TGCAGGTGGCAAAGGAGCTCAGGCGATGCACCCTAC...TCCCCACACTCCGGGGCAGATCTTTCCTCTTGTCTGTGGTAAGGAAGGAGTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453327.7
ENST00000550558.5
CDS-3UTR TCA 90 bp ACCCAGAGCCCTGCCTGCTGTTCCCCTATCCAATGCACACTTTTTGGCCTCATTGTAGGGTGCATCGCCTaGGCTCCTTTGCCACCTGCA +
Preference number: 4 (lower is better)
Translates to: TQSPACCSPIQCTLFGLIVGCIA*APLPPA
Trigger: TGCAGGTGGCAAAGGAGCTCAGGCGATGCACCCTAC...AATGAGGCCAAAAAGTGTGCATTGGATAGGGGAACAGCAGGCAGGGCTCTGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550558.5
CDS-3UTR GCA 90 bp TATGGTCAAGACTCCTTCCTTACCACAGACAAGAGGAAAGATCTGCCCCGGAGTGCACAGGGCCCACAGTaGCCGCTTCAGAGACAGCCG +
Preference number: 4 (lower is better)
Translates to: YGQDSFLTTDKRKDLPRSAQGPQ*PLQRQP
Trigger: CGGCTGTCTCTGAAGCGGGCACTGTGGGCCCTGTGC...ACTCCGGGGCAGATCTTTCCTCTTGTCTGTGGTAAGGAAGGAGTCTTGACCATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR GCA 90 bp CATCCCACTGCCCCAACTTCAGGAGTCGCCAATCCCCAGCTCCCTTCTGTCTCTATGGTGAGGAAGGGCTaGCTCTTGGGATTTCTCTCC +
Preference number: 4 (lower is better)
Translates to: HPTAPTSGVANPQLPSVSMVRKG*LLGFLS
Trigger: GGAGAGAAATCCCAAGAGGCAGCCCTTCCTCACCAT...AGAGACAGAAGGGAGCTGGGGATTGGCGACTCCTGAAGTTGGGGCAGTGGGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR GCA 90 bp TGCTTCTCAGAGGGATGTGTGTACACAGTACAGACACCAGGGGAGAGAGTCCAACAGGAAGGCACCCAGTaGCAGGACAAAGGCCACCGC +
Preference number: 4 (lower is better)
Translates to: CFSEGCVYTVQTPGERVQQEGTQ*QDKGHR
Trigger: GCGGTGGCCTTTGTCCTGGCACTGGGTGCCTTCCTG...TTGGACTCTCTCCCCTGGTGTCTGTACTGTGTACACACATCCCTCTGAGAAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552438.5
CDS-3UTR GCA 90 bp TCCTTTGTCGCCACTGAGACAGTGCAAAGGTTACAATGCGCGTGTCGTCTCCTTGTTGCAGAGGGTGACTaGCGGGAAGGCCAGCTCCGT +
Preference number: 4 (lower is better)
Translates to: SFVATETVQRLQCACRLLVAEGD*REGQLR
Trigger: ACGGAGCTGGCCTTCCCGGCAGTCACCCTCTGCAAC...AAGGAGACGACACGCGCATTGTAACCTTTGCACTGTCTCAGTGGCGACAAAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552438.5
CDS-3UTR GCA 90 bp CATCCCACTGCCCCAACTTCAGGAGTCGCCAATCCCCAGCTCCCTTCTGTCTCTGTGAAGACCCTTTCTTaGCCTCTGTGTGCCCTGGAA +
Preference number: 4 (lower is better)
Translates to: HPTAPTSGVANPQLPSVSVKTLS*PLCALE
Trigger: TTCCAGGGCACACAGAGGGCAAGAAAGGGTCTTCAC...AGAGACAGAAGGGAGCTGGGGATTGGCGACTCCTGAAGTTGGGGCAGTGGGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550558.5
CDS-3UTR CCA 90 bp AAGGTTACAATGCGCGTGTCGTCTCCTTGTGCTTCTCAGAGGGATGTGTGTACACTGCTGGCGAAGGCCTaGATGCTCACCGGCTGGACG +
Preference number: 4 (lower is better)
Translates to: KVTMRVSSPCASQRDVCTLLAKA*MLTGWT
Trigger: CGTCCAGCCGGTGAGCATCCAGGCCTTCGCCAGCAG...TGTACACACATCCCTCTGAGAAGCACAAGGAGACGACACGCGCATTGTAACCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR CCA 90 bp GCTTCCTTTGTCGCCACTGAGACAGTGCAAAGGTTACAATGCGCGTGTCGTCTCGCAGTGTGGAGCTGCTaGCGAAGGCCTGGATGCTCA +
Preference number: 4 (lower is better)
Translates to: ASFVATETVQRLQCACRLAVWSC*RRPGCS
Trigger: TGAGCATCCAGGCCTTCGCCAGCAGCTCCACACTGC...GAGACGACACGCGCATTGTAACCTTTGCACTGTCTCAGTGGCGACAAAGGAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR CCA 90 bp AAGAATGGGATAGAGGCAGAGAGAGGACTCTATGGTCAAGACTCCTTCCTTACCCCGTCCCACCCTTCATaGTCTTCAGCCGCGGCCGCC +
Preference number: 4 (lower is better)
Translates to: KNGIEAERGLYGQDSFLTPSHPS*SSAAAA
Trigger: GGCGGCCGCGGCTGAAGACCATGAAGGGTGGGACGG...GGTAAGGAAGGAGTCTTGACCATAGAGTCCTCTCTCTGCCTCTATCCCATTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000453327.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CCA 90 bp GTATGTCATCCCGGCAGGGTGGCCCCGAAGGCTCTCGCACGGGTTGTGTCTTTTCTCCTTGTACTGCTCTaGAGTACAGTATGGGGCATC +
Preference number: 4 (lower is better)
Translates to: VCHPGRVAPKALARVVSFLLVLL*STVWGI
Trigger: GATGCCCCATACTGTACTCCAGAGCAGTACAAGGAG...AAAAGACACAACCCGTGCGAGAGCCTTCGGGGCCACCCTGCCGGGATGACATAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000550558.5
CDS-3UTR CCA 90 bp ACTTGGCTTAGTGTCCAGGGTAGACCTCCATCCCCTGGGTGGGGGCTATCTCTATCTTGGCCAGGTACTTaGCTGAGGCTTTGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: TWLSVQGRPPSPGWGLSLSWPGT*LRLCWG
Trigger: TCCCCAGCAAAGCCTCAGCCAAGTACCTGGCCAAGA...TAGAGATAGCCCCCACCCAGGGGATGGAGGTCTACCCTGGACACTAAGCCAAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CCA 90 bp GTGTCGTCTCCTTGTGCTTCTCAGAGGGATGTGTGTACACAGTACAGACACCAGGAAGGGCCTCTGGGGTaGAGGACCCTCATGGGACAG +
Preference number: 4 (lower is better)
Translates to: VSSPCASQRDVCTQYRHQEGPLG*RTLMGQ
Trigger: CTGTCCCATGAGGGTCCTCCACCCCAGAGGCCCTTC...CTGGTGTCTGTACTGTGTACACACATCCCTCTGAGAAGCACAAGGAGACGACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228468.8
CDS-3UTR CCA 90 bp ACTTATAGGTATCAGGATGTAGCCTACAGCACCAGGGCCGCATCTTGTCCCCATTTGGGGAAGGGCCTCTaGGGTGGAGGACCCTCATGG +
Preference number: 4 (lower is better)
Translates to: TYRYQDVAYSTRAASCPHLGKGL*GGGPSW
Trigger: CCATGAGGGTCCTCCACCCCAGAGGCCCTTCCCCAA...ATGGGGACAAGATGCGGCCCTGGTGCTGTAGGCTACATCCTGATACCTATAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000228468.8
CDS-3UTR CCA 90 bp AAGAATGGGATAGAGGCAGAGAGAGGACTCTATGGTCAAGACTCCTTCCTTACCGTCATCCCGGCAGGGTaGCCCCGAAGGCTCTCGCAC +
Preference number: 4 (lower is better)
Translates to: KNGIEAERGLYGQDSFLTVIPAG*PRRLSH
Trigger: GTGCGAGAGCCTTCGGGGCCACCCTGCCGGGATGAC...GGTAAGGAAGGAGTCTTGACCATAGAGTCCTCTCTCTGCCTCTATCCCATTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000453327.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CCA 90 bp GAGGACTCTATGGTCAAGACTCCTTCCTTACCACAGACAAGAGGAAAGATCTGCGTCATCCCGGCAGGGTaGCCCCGAAGGCTCTCGCAC +
Preference number: 4 (lower is better)
Translates to: EDSMVKTPSLPQTRGKICVIPAG*PRRLSH
Trigger: GTGCGAGAGCCTTCGGGGCCACCCTGCCGGGATGAC...GCAGATCTTTCCTCTTGTCTGTGGTAAGGAAGGAGTCTTGACCATAGAGTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000453327.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CCA 90 bp CTTCTCAGAGGGATGTGTGTACACAGTACAGACACCAGGGGAGAGAGTCCAACTATCTGCCCCGGAGTGTaGGGAGTCCCCAGGGCAGAT +
Preference number: 4 (lower is better)
Translates to: LLRGMCVHSTDTRGESPTICPGV*GVPRAD
Trigger: ATCTGCCCTGGGGACTCCCCACACTCCGGGGCAGAT...AGTTGGACTCTCTCCCCTGGTGTCTGTACTGTGTACACACATCCCTCTGAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
ENST00000552633.2
CDS-3UTR CCA 90 bp GTGTCGTCTCCTTGTGCTTCTCAGAGGGATGTGTGTACACAGTACAGACACCAGCCCTTCTCCCTGAGCTaGACGCTAACCAGCCCGGTC +
Preference number: 4 (lower is better)
Translates to: VSSPCASQRDVCTQYRHQPFSLS*TLTSPV
Trigger: GACCGGGCTGGTTAGCGTCCAGCTCAGGGAGAAGGG...CTGGTGTCTGTACTGTGTACACACATCCCTCTGAGAAGCACAAGGAGACGACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CCA 90 bp GTATGTCATCCCGGCAGGGTGGCCCCGAAGGCTCTCGCACGGGTTGTGTCTTTTGAAAATTTATGGACGTaGCCCTCTACAAGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: VCHPGRVAPKALARVVSFENLWT*PSTRAS
Trigger: GGAGGCCCTTGTAGAGGGCCACGTCCATAAATTTTC...AAAAGACACAACCCGTGCGAGAGCCTTCGGGGCCACCCTGCCGGGATGACATAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000550558.5
CDS-3UTR CCA 90 bp CATCCCACTGCCCCAACTTCAGGAGTCGCCAATCCCCAGCTCCCTTCTGTCTCTCTTGGGGTGGGAGAATaGTTCTCAGAGACAAGAGGG +
Preference number: 4 (lower is better)
Translates to: HPTAPTSGVANPQLPSVSLGVGE*FSETRG
Trigger: CCCTCTTGTCTCTGAGAACCATTCTCCCACCCCAAG...AGAGACAGAAGGGAGCTGGGGATTGGCGACTCCTGAAGTTGGGGCAGTGGGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CCA 90 bp ATAAGAAAATTTATGGACGTGGCCCTCTACAAGGGCCTCCGGGAGAGGGACCAGCAGCAACCCCTTCCCTaGGGATGCCACTGTCAGCTG +
Preference number: 4 (lower is better)
Translates to: IRKFMDVALYKGLRERDQQQPLP*GCHCQL
Trigger: CAGCTGACAGTGGCATCCCCAGGGAAGGGGTTGCTG...CTGGTCCCTCTCCCGGAGGCCCTTGTAGAGGGCCACGTCCATAAATTTTCTTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CCA 90 bp GCTTCCTTTGTCGCCACTGAGACAGTGCAAAGGTTACAATGCGCGTGTCGTCTCATCTCCCAAGGGCCCTaGGGCTTCCTCTCCAGAGGA +
Preference number: 4 (lower is better)
Translates to: ASFVATETVQRLQCACRLISQGP*GFLSRG
Trigger: TCCTCTGGAGAGGAAGCCCCAGGGCCCTTGGGAGAT...GAGACGACACGCGCATTGTAACCTTTGCACTGTCTCAGTGGCGACAAAGGAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552438.5
CDS-3UTR TCA 90 bp AAGACTCCTTCCTTACCACAGACAAGAGGAAAGATCTGCCCCGGAGTGTGGGGACGATGCGGCAGGCAGTaGTGCTGTAGGAGTCGAAGA +
Preference number: 4 (lower is better)
Translates to: KTPSLPQTRGKICPGVWGRCGRQ*CCRSRR
Trigger: TCTTCGACTCCTACAGCATCACTGCCTGCCGCATCG...TCCCCACACTCCGGGGCAGATCTTTCCTCTTGTCTGTGGTAAGGAAGGAGTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000453327.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR TCA 90 bp GCCTTTGGTGACTGGTGGCAGCAGAATGTAGATGGACACTCAGATGGCAGACAGGCCATGCCCATGGCATaGGAAGGGGACAGGTGTCAT +
Preference number: 4 (lower is better)
Translates to: AFGDWWQQNVDGHSDGRQAMPMA*EGDRCH
Trigger: ATGACACCTGTCCCCTTCTCATGCCATGGGCATGGC...CTGTCTGCCATCTGAGTGTCCATCTACATTCTGCTGCCACCAGTCACCAAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228468.8
CDS-3UTR TCA 90 bp CGTCTCCTTGTGCTTCTCAGAGGGATGTGTGTACACAGTACAGACACCAGGGGAGGGAAGGGCCTTTGGTaGCTGGTGGCAGCAGAATGT +
Preference number: 4 (lower is better)
Translates to: RLLVLLRGMCVHSTDTRGGKGLW*LVAAEC
Trigger: ACATTCTGCTGCCACCAGTCACCAAAGGCCCTTCCC...TCCCCTGGTGTCTGTACTGTGTACACACATCCCTCTGAGAAGCACAAGGAGACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR TCA 90 bp ACAGTACAGACACCAGGGGAGAGAGTCCAACTCTTTATACAGGCGAAGGCATTCACCACTGAGAAGTTGTaGGGGCCGCAGGGTCCCCCT +
Preference number: 4 (lower is better)
Translates to: TVQTPGERVQLFIQAKAFTTEKL*GPQGPP
Trigger: AGGGGGACCCTGCGGCCCTCACAACTTCTCAGTGGT...GAATGCCTTCGCCTGTATAAAGAGTTGGACTCTCTCCCCTGGTGTCTGTACTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000552438.5
CDS-3UTR GCA 90 bp AAGGTTACAATGCGCGTGTCGTCTCCTTGTGCTTCTCAGAGGGATGTGTGTACACTCAGCCCTGGGATCTaGAGGGATCCATCGTCCGGC +
Preference number: 4 (lower is better)
Translates to: KVTMRVSSPCASQRDVCTLSPGI*RDPSSG
Trigger: GCCGGACGATGGATCCCTGCAGATCCCAGGGCTGAG...TGTACACACATCCCTCTGAGAAGCACAAGGAGACGACACGCGCATTGTAACCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228468.8
ENST00000447966.7
CDS-3UTR GCA 90 bp TTTTCCTCGTCGGCACAGCTTGTGCTTAATGACCTCGTAGGCGTAGTCAAAGAGCGTGCAGTGTGGAGCTaGTGGCGAAGGCCTGGATGC +
Preference number: 4 (lower is better)
Translates to: FSSSAQLVLNDLVGVVKERAVWS*WRRPGC
Trigger: GCATCCAGGCCTTCGCCAGCAGCTCCACACTGCACG...CTCTTTGACTACGCCTACGAGGTCATTAAGCACAAGCTGTGCCGACGAGGAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550558.5
CDS-3UTR GCA 90 bp CATAAGAAAATTTATGGACGTGGCCCTCTACAAGGGCCTCCGGGAGAGGGACCACGCCCTTGTCCGCACTaGTCCTTTTGGCCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: HKKIYGRGPLQGPPGEGPRPCPH*SFWPPS
Trigger: AGAAGGAGGCCAAAAGGAGCAGTGCGGACAAGGGCG...TGGTCCCTCTCCCGGAGGCCCTTGTAGAGGGCCACGTCCATAAATTTTCTTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR GCA 90 bp GCGCGTGTCGTCTCCTTGTGCTTCTCAGAGGGATGTGTGTACACAGTACAGACACTGTCAGCATCCCACTaGCCCAACTTCAGGAGTCGC +
Preference number: 4 (lower is better)
Translates to: ARVVSLCFSEGCVYTVQTLSASH*PNFRSR
Trigger: GCGACTCCTGAAGTTGGGGCAGTGGGATGCTGACAG...TGTCTGTACTGTGTACACACATCCCTCTGAGAAGCACAAGGAGACGACACGCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR GCA 90 bp GCCTTTGGTGACTGGTGGCAGCAGAATGTAGATGGACACTCAGATGGCAGACAGCCAGGCCAATGCAGCTaGTCACAGGTCCTGTTCTGG +
Preference number: 4 (lower is better)
Translates to: AFGDWWQQNVDGHSDGRQPGQCS*SQVLFW
Trigger: CCAGAACAGGACCTGTGAGCAGCTGCATTGGCCTGG...CTGTCTGCCATCTGAGTGTCCATCTACATTCTGCTGCCACCAGTCACCAAAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR GCA 90 bp AGTGCAAAGGTTACAATGCGCGTGTCGTCTCCTTGTGCTTCTCAGAGGGATGTGCCAGCTCCAGGCCAATaGAGCTGCTCACAGGTCCTG +
Preference number: 4 (lower is better)
Translates to: SAKVTMRVSSPCASQRDVPAPGQ*SCSQVL
Trigger: CAGGACCTGTGAGCAGCTGCATTGGCCTGGAGCTGG...CACATCCCTCTGAGAAGCACAAGGAGACGACACGCGCATTGTAACCTTTGCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR GCA 90 bp CATAAGAAAATTTATGGACGTGGCCCTCTACAAGGGCCTCCGGGAGAGGGACCAACCCAGAGCCCTGCCTaGTGTTCCCCTATCCAATGC +
Preference number: 4 (lower is better)
Translates to: HKKIYGRGPLQGPPGEGPTQSPA*CSPIQC
Trigger: GCATTGGATAGGGGAACAGCAGGCAGGGCTCTGGGT...TGGTCCCTCTCCCGGAGGCCCTTGTAGAGGGCCACGTCCATAAATTTTCTTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR GCA 90 bp ACAGCTTCCTTTGTCGCCACTGAGACAGTGCAAAGGTTACAATGCGCGTGTCGTCGTCACCCAGAGCCCTaGCTGCTGTTCCCCTATCCA +
Preference number: 4 (lower is better)
Translates to: TASFVATETVQRLQCACRRHPEP*LLFPYP
Trigger: TGGATAGGGGAACAGCAGGCAGGGCTCTGGGTGACG...ACGACACGCGCATTGTAACCTTTGCACTGTCTCAGTGGCGACAAAGGAAGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR GCA 90 bp GCGCGTGTCGTCTCCTTGTGCTTCTCAGAGGGATGTGTGTACACAGTACAGACAATTAGACCAGAGGCATaGGTCACCCAGAGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: ARVVSLCFSEGCVYTVQTIRPEA*VTQSPA
Trigger: GGCAGGGCTCTGGGTGACGCATGCCTCTGGTCTAAT...TGTCTGTACTGTGTACACACATCCCTCTGAGAAGCACAAGGAGACGACACGCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR GCA 90 bp ACTTGGCTTAGTGTCCAGGGTAGACCTCCATCCCCTGGGTGGGGGCTATCTCTAAGCTCCTTTGCCACCTaGATGGGCTTCACCTTGAAG +
Preference number: 4 (lower is better)
Translates to: TWLSVQGRPPSPGWGLSLSSFAT*MGFTLK
Trigger: CTTCAAGGTGAAGCCCATGCAGGTGGCAAAGGAGCT...TAGAGATAGCCCCCACCCAGGGGATGGAGGTCTACCCTGGACACTAAGCCAAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550558.5
CDS-3UTR GCA 90 bp AAGACTCCTTCCTTACCACAGACAAGAGGAAAGATCTGCCCCGGAGTGTGGGGATCGCCTGAGCTCCTTTaGCACCTGCATGGGCTTCAC +
Preference number: 4 (lower is better)
Translates to: KTPSLPQTRGKICPGVWGSPELL*HLHGLH
Trigger: GTGAAGCCCATGCAGGTGGCAAAGGAGCTCAGGCGA...TCCCCACACTCCGGGGCAGATCTTTCCTCTTGTCTGTGGTAAGGAAGGAGTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453327.7
ENST00000550558.5
CDS-3UTR CCA 90 bp ATGCGCGTGTCGTCTCCTTGTGCTTCTCAGAGGGATGTGTGTACACAGTACAGAGCAGTGTGGAGCTGCTaGCGAAGGCCTGGATGCTCA +
Preference number: 4 (lower is better)
Translates to: MRVSSPCASQRDVCTQYRAVWSC*RRPGCS
Trigger: TGAGCATCCAGGCCTTCGCCAGCAGCTCCACACTGC...TCTGTACTGTGTACACACATCCCTCTGAGAAGCACAAGGAGACGACACGCGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR CCA 90 bp GTTACAATGCGCGTGTCGTCTCCTTGTGCTTCTCAGAGGGATGTGTGTACACAGGTATGGGGCATCCCCTaGCATGTGCACCATGCGGCA +
Preference number: 4 (lower is better)
Translates to: VTMRVSSPCASQRDVCTQVWGIP*HVHHAA
Trigger: TGCCGCATGGTGCACATGCCAGGGGATGCCCCATAC...CTGTGTACACACATCCCTCTGAGAAGCACAAGGAGACGACACGCGCATTGTAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CCA 90 bp TGCTTCTCAGAGGGATGTGTGTACACAGTACAGACACCAGGGGAGAGAGTCCAAGTATGGGGCATCCCCTaGCATGTGCACCATGCGGCA +
Preference number: 4 (lower is better)
Translates to: CFSEGCVYTVQTPGERVQVWGIP*HVHHAA
Trigger: TGCCGCATGGTGCACATGCCAGGGGATGCCCCATAC...TTGGACTCTCTCCCCTGGTGTCTGTACTGTGTACACACATCCCTCTGAGAAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CCA 90 bp AGGACTCTATGGTCAAGACTCCTTCCTTACCACAGACAAGAGGAAAGATCTGCCCCCCATCTAGGCCTTTaGTTCAGCGGCCTGCGGGGC +
Preference number: 4 (lower is better)
Translates to: RTLWSRLLPYHRQEERSAPHLGL*FSGLRG
Trigger: GCCCCGCAGGCCGCTGAACCAAAGGCCTAGATGGGG...GGCAGATCTTTCCTCTTGTCTGTGGTAAGGAAGGAGTCTTGACCATAGAGTCCT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000453327.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CCA 90 bp AAGGTTACAATGCGCGTGTCGTCTCCTTGTGCTTCTCAGAGGGATGTGTGTACACCCTTCTCCCTGAGCTaGACGCTAACCAGCCCGGTC +
Preference number: 4 (lower is better)
Translates to: KVTMRVSSPCASQRDVCTPFSLS*TLTSPV
Trigger: GACCGGGCTGGTTAGCGTCCAGCTCAGGGAGAAGGG...TGTACACACATCCCTCTGAGAAGCACAAGGAGACGACACGCGCATTGTAACCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CCA 90 bp TCCTTTGTCGCCACTGAGACAGTGCAAAGGTTACAATGCGCGTGTCGTCTCCTTCAGCAACCCCTTCCCTaGGGATGCCACTGTCAGCTG +
Preference number: 4 (lower is better)
Translates to: SFVATETVQRLQCACRLLQQPLP*GCHCQL
Trigger: CAGCTGACAGTGGCATCCCCAGGGAAGGGGTTGCTG...AAGGAGACGACACGCGCATTGTAACCTTTGCACTGTCTCAGTGGCGACAAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CCA 90 bp GCCTTTGGTGACTGGTGGCAGCAGAATGTAGATGGACACTCAGATGGCAGACAGCCTCCATCCCCTGGGTaGGGGCTATCTCTACAGCAA +
Preference number: 4 (lower is better)
Translates to: AFGDWWQQNVDGHSDGRQPPSPG*GLSLQQ
Trigger: TTGCTGTAGAGATAGCCCCCACCCAGGGGATGGAGG...CTGTCTGCCATCTGAGTGTCCATCTACATTCTGCTGCCACCAGTCACCAAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CCA 90 bp GCGCGTGTCGTCTCCTTGTGCTTCTCAGAGGGATGTGTGTACACAGTACAGACACCTCCATCCCCTGGGTaGGGGCTATCTCTACAGCAA +
Preference number: 4 (lower is better)
Translates to: ARVVSLCFSEGCVYTVQTPPSPG*GLSLQQ
Trigger: TTGCTGTAGAGATAGCCCCCACCCAGGGGATGGAGG...TGTCTGTACTGTGTACACACATCCCTCTGAGAAGCACAAGGAGACGACACGCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CCA 90 bp ACTTGGCTTAGTGTCCAGGGTAGACCTCCATCCCCTGGGTGGGGGCTATCTCTACCACAAAAATGTGGTTaGTGCCATGGAGGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: TWLSVQGRPPSPGWGLSLPQKCG*CHGGCS
Trigger: GCTGCACCCTCCATGGCACCAACCACATTTTTGTGG...TAGAGATAGCCCCCACCCAGGGGATGGAGGTCTACCCTGGACACTAAGCCAAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000552438.5
CDS-3UTR TCA 90 bp GTGTCGTCTCCTTGTGCTTCTCAGAGGGATGTGTGTACACAGTACAGACACCAGCAGTTCCATCCTTGTTaGGGGGATCCTGAGGGGGCT +
Preference number: 4 (lower is better)
Translates to: VSSPCASQRDVCTQYRHQQFHPC*GDPEGA
Trigger: AGCCCCCTCAGGATCCCCTCAACAAGGATGGAACTG...CTGGTGTCTGTACTGTGTACACACATCCCTCTGAGAAGCACAAGGAGACGACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR TCA 90 bp TGTGCTTCTCAGAGGGATGTGTGTACACAGTACAGACACCAGGGGAGAGAGTCCCCTCGTCGAGCTTGGTaGCATGGTGGTAGTGGAAGT +
Preference number: 4 (lower is better)
Translates to: CASQRDVCTQYRHQGRESPRRAW*HGGSGS
Trigger: ACTTCCACTACCACCATGTCACCAAGCTCGACGAGG...GGACTCTCTCCCCTGGTGTCTGTACTGTGTACACACATCCCTCTGAGAAGCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR TCA 90 bp ACAGCTTCCTTTGTCGCCACTGAGACAGTGCAAAGGTTACAATGCGCGTGTCGTTCTCATACCTGTTGTTaGGCAGGGCCAGCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: TASFVATETVQRLQCACRSHTCC*AGPAAP
Trigger: GGGAGCTGCTGGCCCTGCTCAACAACAGGTATGAGA...ACGACACGCGCATTGTAACCTTTGCACTGTCTCAGTGGCGACAAAGGAAGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR TCA 90 bp AAGACTCCTTCCTTACCACAGACAAGAGGAAAGATCTGCCCCGGAGTGTGGGGAAGCCCAGCTGGTCGATaGAAGGAGGTTCATCCTGAC +
Preference number: 4 (lower is better)
Translates to: KTPSLPQTRGKICPGVWGSPAGR*KEVHPD
Trigger: GTCAGGATGAACCTCCTTTCATCGACCAGCTGGGCT...TCCCCACACTCCGGGGCAGATCTTTCCTCTTGTCTGTGGTAAGGAAGGAGTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000453327.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR TCA 90 bp GCAAAGGTTACAATGCGCGTGTCGTCTCCTTGTGCTTCTCAGAGGGATGTGTGTGGGAAGGGCCTTTGGTaGCTGGTGGCAGCAGAATGT +
Preference number: 4 (lower is better)
Translates to: AKVTMRVSSPCASQRDVCGKGLW*LVAAEC
Trigger: ACATTCTGCTGCCACCAGTCACCAAAGGCCCTTCCC...ACACACATCCCTCTGAGAAGCACAAGGAGACGACACGCGCATTGTAACCTTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR TCA 90 bp CGTCTCCTTGTGCTTCTCAGAGGGATGTGTGTACACAGTACAGACACCAGGGGAGTGAGAGAGTGGGGCTaGGGTTTTAGTTCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: RLLVLLRGMCVHSTDTRGVREWG*GFSSCQ
Trigger: CTGGCAGGAACTAAAACCTCAGCCCCACTCTCTCAC...TCCCCTGGTGTCTGTACTGTGTACACACATCCCTCTGAGAAGCACAAGGAGACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR TCA 90 bp ATGCGCGTGTCGTCTCCTTGTGCTTCTCAGAGGGATGTGTGTACACAGTACAGAGGAAAGGCCACTGACTaGGGACCTCAGCTTCTGCCT +
Preference number: 4 (lower is better)
Translates to: MRVSSPCASQRDVCTQYRGKATD*GPQLLP
Trigger: AGGCAGAAGCTGAGGTCCTCAGTCAGTGGCCTTTCC...TCTGTACTGTGTACACACATCCCTCTGAGAAGCACAAGGAGACGACACGCGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR TCA 90 bp ACAGCTTCCTTTGTCGCCACTGAGACAGTGCAAAGGTTACAATGCGCGTGTCGTGGAAAGGCCACTGACTaGGGACCTCAGCTTCTGCCT +
Preference number: 4 (lower is better)
Translates to: TASFVATETVQRLQCACRGKATD*GPQLLP
Trigger: AGGCAGAAGCTGAGGTCCTCAGTCAGTGGCCTTTCC...ACGACACGCGCATTGTAACCTTTGCACTGTCTCAGTGGCGACAAAGGAAGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR TCA 90 bp CTATGGTCAAGACTCCTTCCTTACCACAGACAAGAGGAAAGATCTGCCCCGGAGGGAAAGGCCACTGACTaGGGACCTCAGCTTCTGCCT +
Preference number: 4 (lower is better)
Translates to: LWSRLLPYHRQEERSAPEGKATD*GPQLLP
Trigger: AGGCAGAAGCTGAGGTCCTCAGTCAGTGGCCTTTCC...CTCCGGGGCAGATCTTTCCTCTTGTCTGTGGTAAGGAAGGAGTCTTGACCATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR TCA 90 bp AGTGCAAAGGTTACAATGCGCGTGTCGTCTCCTTGTGCTTCTCAGAGGGATGTGGGAAAGGCCACTGACTaGGGACCTCAGCTTCTGCCT +
Preference number: 4 (lower is better)
Translates to: SAKVTMRVSSPCASQRDVGKATD*GPQLLP
Trigger: AGGCAGAAGCTGAGGTCCTCAGTCAGTGGCCTTTCC...CACATCCCTCTGAGAAGCACAAGGAGACGACACGCGCATTGTAACCTTTGCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR TCA 90 bp GAGACAGTGCAAAGGTTACAATGCGCGTGTCGTCTCCTTGTGCTTCTCAGAGGGGCATGGGCTTCACCTTaGAGTCTTCAGCGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: ETVQRLQCACRLLVLLRGAWASP*SLQRCR
Trigger: TCTGCAGCGCTGAAGACTTCAAGGTGAAGCCCATGC...CCCTCTGAGAAGCACAAGGAGACGACACGCGCATTGTAACCTTTGCACTGTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550558.5
CDS-3UTR TCA 90 bp CATAAGAAAATTTATGGACGTGGCCCTCTACAAGGGCCTCCGGGAGAGGGACCACTCCTCTTCCGATTCTaGGATGTCCTGCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: HKKIYGRGPLQGPPGEGPLLFRF*DVLLLL
Trigger: CAGCAGCAGCAGGACATCTCAGAATCGGAAGAGGAG...TGGTCCCTCTCCCGGAGGCCCTTGTAGAGGGCCACGTCCATAAATTTTCTTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552438.5
CDS-3UTR TCA 90 bp TGCTTCTCAGAGGGATGTGTGTACACAGTACAGACACCAGGGGAGAGAGTCCAAGCGTGTGAAGACCACTaGGAAGTTGTGAGGGCCGCA +
Preference number: 4 (lower is better)
Translates to: CFSEGCVYTVQTPGERVQACEDH*EVVRAA
Trigger: TGCGGCCCTCACAACTTCTCAGTGGTCTTCACACGC...TTGGACTCTCTCCCCTGGTGTCTGTACTGTGTACACACATCCCTCTGAGAAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552438.5
CDS-3UTR GCA 90 bp ATGATCTCTGAGGAAACTCTTAGGAACCAAGAGATTCCAAAGATCCTACAGCCTCGGCGCGGTGCGCGGTaGTCTCAGCCCTGGGATCTG +
Preference number: 4 (lower is better)
Translates to: MISEETLRNQEIPKILQPRRGAR*SQPWDL
Trigger: CAGATCCCAGGGCTGAGAGCACCGCGCACCGCGCCG...AGGCTGTAGGATCTTTGGAATCTCTTGGTTCCTAAGAGTTTCCTCAGAGATCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228468.8
ENST00000447966.7
CDS-3UTR GCA 90 bp GAGGACTCTATGGTCAAGACTCCTTCCTTACCACAGACAAGAGGAAAGATCTGCCGTGCAGTGTGGAGCTaGTGGCGAAGGCCTGGATGC +
Preference number: 4 (lower is better)
Translates to: EDSMVKTPSLPQTRGKICRAVWS*WRRPGC
Trigger: GCATCCAGGCCTTCGCCAGCAGCTCCACACTGCACG...GCAGATCTTTCCTCTTGTCTGTGGTAAGGAAGGAGTCTTGACCATAGAGTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR GCA 90 bp CTATCTCTACAGCAACCCCTTCCCTGGGGATGCCACTGTCAGCTGGGCAGAGGGTGCAGTATCTCCAGCTaGTTTTCATCTGCCATCTGT +
Preference number: 4 (lower is better)
Translates to: LSLQQPLPWGCHCQLGRGCSISS*FSSAIC
Trigger: ACAGATGGCAGATGAAAAGCAGCTGGAGATACTGCA...CCCTCTGCCCAGCTGACAGTGGCATCCCCAGGGAAGGGGTTGCTGTAGAGATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR GCA 90 bp CTATCTCTACAGCAACCCCTTCCCTGGGGATGCCACTGTCAGCTGGGCAGAGGGAAGTTGGCTTTGTCCTaGAGTATCTCCAGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: LSLQQPLPWGCHCQLGRGKLALS*SISSCF
Trigger: AAAGCAGCTGGAGATACTGCAGGACAAAGCCAACTT...CCCTCTGCCCAGCTGACAGTGGCATCCCCAGGGAAGGGGTTGCTGTAGAGATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR GCA 90 bp ACTGCCCCAACTTCAGGAGTCGCCAATCCCCAGCTCCCTTCTGTCTCTGACACAGCACACTCCTTGTACTaGTCTGGAGTACAGTATGGG +
Preference number: 4 (lower is better)
Translates to: TAPTSGVANPQLPSVSDTAHSLY*SGVQYG
Trigger: CCCATACTGTACTCCAGAGCAGTACAAGGAGTGTGC...TGTGTCAGAGACAGAAGGGAGCTGGGGATTGGCGACTCCTGAAGTTGGGGCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR GCA 90 bp CCAATGCAGCTGCTCACAGGTCCTGTTCTGGGATTGAAGACCAAGACACAGCTAGAGGACCTCAGCTTCTaGCTGTCAGCATCCCACTGC +
Preference number: 4 (lower is better)
Translates to: PMQLLTGPVLGLKTKTQLEDLSF*LSASHC
Trigger: GCAGTGGGATGCTGACAGGCAGAAGCTGAGGTCCTC...TAGCTGTGTCTTGGTCTTCAATCCCAGAACAGGACCTGTGAGCAGCTGCATTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR GCA 90 bp ACTTATAGGTATCAGGATGTAGCCTACAGCACCAGGGCCGCATCTTGTCCCCATCCAGGCCAATGCAGCTaGTCACAGGTCCTGTTCTGG +
Preference number: 4 (lower is better)
Translates to: TYRYQDVAYSTRAASCPHPGQCS*SQVLFW
Trigger: CCAGAACAGGACCTGTGAGCAGCTGCATTGGCCTGG...ATGGGGACAAGATGCGGCCCTGGTGCTGTAGGCTACATCCTGATACCTATAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR GCA 90 bp ATGCGCGTGTCGTCTCCTTGTGCTTCTCAGAGGGATGTGTGTACACAGTACAGACCAGGCCAATGCAGCTaGTCACAGGTCCTGTTCTGG +
Preference number: 4 (lower is better)
Translates to: MRVSSPCASQRDVCTQYRPGQCS*SQVLFW
Trigger: CCAGAACAGGACCTGTGAGCAGCTGCATTGGCCTGG...TCTGTACTGTGTACACACATCCCTCTGAGAAGCACAAGGAGACGACACGCGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR GCA 90 bp AGTGCAAAGGTTACAATGCGCGTGTCGTCTCCTTGTGCTTCTCAGAGGGATGTGACCCAGAGCCCTGCCTaGTGTTCCCCTATCCAATGC +
Preference number: 4 (lower is better)
Translates to: SAKVTMRVSSPCASQRDVTQSPA*CSPIQC
Trigger: GCATTGGATAGGGGAACAGCAGGCAGGGCTCTGGGT...CACATCCCTCTGAGAAGCACAAGGAGACGACACGCGCATTGTAACCTTTGCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR GCA 90 bp AAAGGTTACAATGCGCGTGTCGTCTCCTTGTGCTTCTCAGAGGGATGTGTGTACCGTCACCCAGAGCCCTaGCTGCTGTTCCCCTATCCA +
Preference number: 4 (lower is better)
Translates to: KGYNARVVSLCFSEGCVYRHPEP*LLFPYP
Trigger: TGGATAGGGGAACAGCAGGCAGGGCTCTGGGTGACG...GTACACACATCCCTCTGAGAAGCACAAGGAGACGACACGCGCATTGTAACCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR GCA 90 bp CAGTGCAAAGGTTACAATGCGCGTGTCGTCTCCTTGTGCTTCTCAGAGGGATGTATTAGACCAGAGGCATaGGTCACCCAGAGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: QCKGYNARVVSLCFSEGCIRPEA*VTQSPA
Trigger: GGCAGGGCTCTGGGTGACGCATGCCTCTGGTCTAAT...ACATCCCTCTGAGAAGCACAAGGAGACGACACGCGCATTGTAACCTTTGCACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR GCA 90 bp AGTGCAAAGGTTACAATGCGCGTGTCGTCTCCTTGTGCTTCTCAGAGGGATGTGATTAGACCAGAGGCATaGGTCACCCAGAGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: SAKVTMRVSSPCASQRDVIRPEA*VTQSPA
Trigger: GGCAGGGCTCTGGGTGACGCATGCCTCTGGTCTAAT...CACATCCCTCTGAGAAGCACAAGGAGACGACACGCGCATTGTAACCTTTGCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR GCA 90 bp TGTGCTTCTCAGAGGGATGTGTGTACACAGTACAGACACCAGGGGAGAGAGTCCAAGTCCATGGGTGAATaGCCCTCACTGGCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: CASQRDVCTQYRHQGRESKSMGE*PSLASF
Trigger: GAAGGAGGCCAGTGAGGGGCATTCACCCATGGACTT...GGACTCTCTCCCCTGGTGTCTGTACTGTGTACACACATCCCTCTGAGAAGCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552438.5
CDS-3UTR CCA 90 bp GGCTATCTCTACAGCAACCCCTTCCCTGGGGATGCCACTGTCAGCTGGGCAGAGTCATTCTTGGAGACTTaGCTAAAGCGGAACTCGTTG +
Preference number: 4 (lower is better)
Translates to: GYLYSNPFPGDATVSWAESFLET*LKRNSL
Trigger: CAACGAGTTCCGCTTTAGCCAAGTCTCCAAGAATGA...CTCTGCCCAGCTGACAGTGGCATCCCCAGGGAAGGGGTTGCTGTAGAGATAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR CCA 90 bp TATGGTCAAGACTCCTTCCTTACCACAGACAAGAGGAAAGATCTGCCCCGGAGTGTATGGGGCATCCCCTaGCATGTGCACCATGCGGCA +
Preference number: 4 (lower is better)
Translates to: YGQDSFLTTDKRKDLPRSVWGIP*HVHHAA
Trigger: TGCCGCATGGTGCACATGCCAGGGGATGCCCCATAC...ACTCCGGGGCAGATCTTTCCTCTTGTCTGTGGTAAGGAAGGAGTCTTGACCATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000453327.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CCA 90 bp GCGCGTGTCGTCTCCTTGTGCTTCTCAGAGGGATGTGTGTACACAGTACAGACATCTTGGCCAGGTACTTaGCTGAGGCTTTGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: ARVVSLCFSEGCVYTVQTSWPGT*LRLCWG
Trigger: TCCCCAGCAAAGCCTCAGCCAAGTACCTGGCCAAGA...TGTCTGTACTGTGTACACACATCCCTCTGAGAAGCACAAGGAGACGACACGCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CCA 90 bp ACTGAGACAGTGCAAAGGTTACAATGCGCGTGTCGTCTCCTTGTGCTTCTCAGAGCCACGCCATGCCCATaGCATGAGAAGGGGACAGGT +
Preference number: 4 (lower is better)
Translates to: TETVQRLQCACRLLVLLRATPCP*HEKGTG
Trigger: ACCTGTCCCCTTCTCATGCCATGGGCATGGCGTGGC...TCTGAGAAGCACAAGGAGACGACACGCGCATTGTAACCTTTGCACTGTCTCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228468.8
CDS-3UTR CCA 90 bp GAGGACTCTATGGTCAAGACTCCTTCCTTACCACAGACAAGAGGAAAGATCTGCATCTGCCCCGGAGTGTaGGGAGTCCCCAGGGCAGAT +
Preference number: 4 (lower is better)
Translates to: EDSMVKTPSLPQTRGKICICPGV*GVPRAD
Trigger: ATCTGCCCTGGGGACTCCCCACACTCCGGGGCAGAT...GCAGATCTTTCCTCTTGTCTGTGGTAAGGAAGGAGTCTTGACCATAGAGTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000453327.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CCA 90 bp GCGCGTGTCGTCTCCTTGTGCTTCTCAGAGGGATGTGTGTACACAGTACAGACAAGACAGAATTCAGGCTaGGAGCTAGGGGAGGCAGCA +
Preference number: 4 (lower is better)
Translates to: ARVVSLCFSEGCVYTVQTRQNSG*ELGEAA
Trigger: TGCTGCCTCCCCTAGCTCCCAGCCTGAATTCTGTCT...TGTCTGTACTGTGTACACACATCCCTCTGAGAAGCACAAGGAGACGACACGCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CCA 90 bp ATAAGAAAATTTATGGACGTGGCCCTCTACAAGGGCCTCCGGGAGAGGGACCAGAGACAGAATTCAGGCTaGGAGCTAGGGGAGGCAGCA +
Preference number: 4 (lower is better)
Translates to: IRKFMDVALYKGLRERDQRQNSG*ELGEAA
Trigger: TGCTGCCTCCCCTAGCTCCCAGCCTGAATTCTGTCT...CTGGTCCCTCTCCCGGAGGCCCTTGTAGAGGGCCACGTCCATAAATTTTCTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CCA 90 bp AGTGCAAAGGTTACAATGCGCGTGTCGTCTCCTTGTGCTTCTCAGAGGGATGTGCCTTCCACCCCTCACTaGGAAGGGCCTTTGGTGACT +
Preference number: 4 (lower is better)
Translates to: SAKVTMRVSSPCASQRDVPSTPH*EGPLVT
Trigger: AGTCACCAAAGGCCCTTCCCAGTGAGGGGTGGAAGG...CACATCCCTCTGAGAAGCACAAGGAGACGACACGCGCATTGTAACCTTTGCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CCA 90 bp TTGTGCTTCTCAGAGGGATGTGTGTACACAGTACAGACACCAGGGGAGAGAGTCCCTTCCACCCCTCACTaGGAAGGGCCTTTGGTGACT +
Preference number: 4 (lower is better)
Translates to: LCFSEGCVYTVQTPGERVPSTPH*EGPLVT
Trigger: AGTCACCAAAGGCCCTTCCCAGTGAGGGGTGGAAGG...GACTCTCTCCCCTGGTGTCTGTACTGTGTACACACATCCCTCTGAGAAGCACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CCA 90 bp ACAGTACAGACACCAGGGGAGAGAGTCCAACTCTTTATACAGGCGAAGGCATTCCAGCAACCCCTTCCCTaGGGATGCCACTGTCAGCTG +
Preference number: 4 (lower is better)
Translates to: TVQTPGERVQLFIQAKAFQQPLP*GCHCQL
Trigger: CAGCTGACAGTGGCATCCCCAGGGAAGGGGTTGCTG...GAATGCCTTCGCCTGTATAAAGAGTTGGACTCTCTCCCCTGGTGTCTGTACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CCA 90 bp ATGCGCGTGTCGTCTCCTTGTGCTTCTCAGAGGGATGTGTGTACACAGTACAGACCTCCATCCCCTGGGTaGGGGCTATCTCTACAGCAA +
Preference number: 4 (lower is better)
Translates to: MRVSSPCASQRDVCTQYRPPSPG*GLSLQQ
Trigger: TTGCTGTAGAGATAGCCCCCACCCAGGGGATGGAGG...TCTGTACTGTGTACACACATCCCTCTGAGAAGCACAAGGAGACGACACGCGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CCA 90 bp GTTACAATGCGCGTGTCGTCTCCTTGTGCTTCTCAGAGGGATGTGTGTACACAGCCTCCATCCCCTGGGTaGGGGCTATCTCTACAGCAA +
Preference number: 4 (lower is better)
Translates to: VTMRVSSPCASQRDVCTQPPSPG*GLSLQQ
Trigger: TTGCTGTAGAGATAGCCCCCACCCAGGGGATGGAGG...CTGTGTACACACATCCCTCTGAGAAGCACAAGGAGACGACACGCGCATTGTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CCA 90 bp AGTGCAAAGGTTACAATGCGCGTGTCGTCTCCTTGTGCTTCTCAGAGGGATGTGGTGAGGAAAGGGGGCTaGGCACCCAGAAGGAGGAAA +
Preference number: 4 (lower is better)
Translates to: SAKVTMRVSSPCASQRDVVRKGG*APRRRK
Trigger: TTTCCTCCTTCTGGGTGCCCAGCCCCCTTTCCTCAC...CACATCCCTCTGAGAAGCACAAGGAGACGACACGCGCATTGTAACCTTTGCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CCA 90 bp AAGACTCCTTCCTTACCACAGACAAGAGGAAAGATCTGCCCCGGAGTGTGGGGAGCCCTCTGTGTGCCCTaGAAAACTGTTCCTGGTAGG +
Preference number: 4 (lower is better)
Translates to: KTPSLPQTRGKICPGVWGALCVP*KTVPGR
Trigger: CCTACCAGGAACAGTTTTCCAGGGCACACAGAGGGC...TCCCCACACTCCGGGGCAGATCTTTCCTCTTGTCTGTGGTAAGGAAGGAGTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000453327.7
ENST00000550558.5
CDS-3UTR CCA 90 bp GCAAAGGTTACAATGCGCGTGTCGTCTCCTTGTGCTTCTCAGAGGGATGTGTGTGGAGGGTGCAGCTGTTaGCAAAGGCCACCAAGTCCA +
Preference number: 4 (lower is better)
Translates to: AKVTMRVSSPCASQRDVCGGCSC*QRPPSP
Trigger: TGGACTTGGTGGCCTTTGCCAACAGCTGCACCCTCC...ACACACATCCCTCTGAGAAGCACAAGGAGACGACACGCGCATTGTAACCTTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552438.5
CDS-3UTR CCA 90 bp ATAAGAAAATTTATGGACGTGGCCCTCTACAAGGGCCTCCGGGAGAGGGACCAGATGTGGTTGGTGCCATaGAGGGTGCAGCTGTTGGCA +
Preference number: 4 (lower is better)
Translates to: IRKFMDVALYKGLRERDQMWLVP*RVQLLA
Trigger: TGCCAACAGCTGCACCCTCCATGGCACCAACCACAT...CTGGTCCCTCTCCCGGAGGCCCTTGTAGAGGGCCACGTCCATAAATTTTCTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552438.5
CDS-3UTR CCA 90 bp GTGTCGTCTCCTTGTGCTTCTCAGAGGGATGTGTGTACACAGTACAGACACCAGAGGCCAGCTCCGTGGTaGCCACTTCGTTTAGAAGGG +
Preference number: 4 (lower is better)
Translates to: VSSPCASQRDVCTQYRHQRPAPW*PLRLEG
Trigger: CCCTTCTAAACGAAGTGGCCACCACGGAGCTGGCCT...CTGGTGTCTGTACTGTGTACACACATCCCTCTGAGAAGCACAAGGAGACGACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552438.5
CDS-3UTR TCA 90 bp TCTATGGTCAAGACTCCTTCCTTACCACAGACAAGAGGAAAGATCTGCCCCGGACAGTTCCATCCTTGTTaGGGGGATCCTGAGGGGGCT +
Preference number: 4 (lower is better)
Translates to: SMVKTPSLPQTRGKICPGQFHPC*GDPEGA
Trigger: AGCCCCCTCAGGATCCCCTCAACAAGGATGGAACTG...TCCGGGGCAGATCTTTCCTCTTGTCTGTGGTAAGGAAGGAGTCTTGACCATAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR TCA 90 bp CATCCCACTGCCCCAACTTCAGGAGTCGCCAATCCCCAGCTCCCTTCTGTCTCTAAAGGAGGTTCATCCTaGCTATGGATCTGCACTTTG +
Preference number: 4 (lower is better)
Translates to: HPTAPTSGVANPQLPSVSKGGSS*LWICTL
Trigger: CAAAGTGCAGATCCATAGTCAGGATGAACCTCCTTT...AGAGACAGAAGGGAGCTGGGGATTGGCGACTCCTGAAGTTGGGGCAGTGGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR TCA 90 bp ACTTATAGGTATCAGGATGTAGCCTACAGCACCAGGGCCGCATCTTGTCCCCATAGCCCAGCTGGTCGATaGAAGGAGGTTCATCCTGAC +
Preference number: 4 (lower is better)
Translates to: TYRYQDVAYSTRAASCPHSPAGR*KEVHPD
Trigger: GTCAGGATGAACCTCCTTTCATCGACCAGCTGGGCT...ATGGGGACAAGATGCGGCCCTGGTGCTGTAGGCTACATCCTGATACCTATAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR TCA 90 bp GTGTCGTCTCCTTGTGCTTCTCAGAGGGATGTGTGTACACAGTACAGACACCAGAGCCCAGCTGGTCGATaGAAGGAGGTTCATCCTGAC +
Preference number: 4 (lower is better)
Translates to: VSSPCASQRDVCTQYRHQSPAGR*KEVHPD
Trigger: GTCAGGATGAACCTCCTTTCATCGACCAGCTGGGCT...CTGGTGTCTGTACTGTGTACACACATCCCTCTGAGAAGCACAAGGAGACGACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR TCA 90 bp AAAGGTTACAATGCGCGTGTCGTCTCCTTGTGCTTCTCAGAGGGATGTGTGTACCGATGCGGCAGGCAGTaGTGCTGTAGGAGTCGAAGA +
Preference number: 4 (lower is better)
Translates to: KGYNARVVSLCFSEGCVYRCGRQ*CCRSRR
Trigger: TCTTCGACTCCTACAGCATCACTGCCTGCCGCATCG...GTACACACATCCCTCTGAGAAGCACAAGGAGACGACACGCGCATTGTAACCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR TCA 90 bp ACTGAGACAGTGCAAAGGTTACAATGCGCGTGTCGTCTCCTTGTGCTTCTCAGACGATGCGGCAGGCAGTaGTGCTGTAGGAGTCGAAGA +
Preference number: 4 (lower is better)
Translates to: TETVQRLQCACRLLVLLRRCGRQ*CCRSRR
Trigger: TCTTCGACTCCTACAGCATCACTGCCTGCCGCATCG...TCTGAGAAGCACAAGGAGACGACACGCGCATTGTAACCTTTGCACTGTCTCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR TCA 90 bp AGTGCAAAGGTTACAATGCGCGTGTCGTCTCCTTGTGCTTCTCAGAGGGATGTGGTGAGAGAGTGGGGCTaGGGTTTTAGTTCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: SAKVTMRVSSPCASQRDVVREWG*GFSSCQ
Trigger: CTGGCAGGAACTAAAACCTCAGCCCCACTCTCTCAC...CACATCCCTCTGAGAAGCACAAGGAGACGACACGCGCATTGTAACCTTTGCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR TCA 90 bp CATAAGAAAATTTATGGACGTGGCCCTCTACAAGGGCCTCCGGGAGAGGGACCAGCTGTGGGGTGGGGGTaGACTTATAGGTATCAGGAT +
Preference number: 4 (lower is better)
Translates to: HKKIYGRGPLQGPPGEGPAVGWG*TYRYQD
Trigger: ATCCTGATACCTATAAGTTCACCCCCACCCCACAGC...TGGTCCCTCTCCCGGAGGCCCTTGTAGAGGGCCACGTCCATAAATTTTCTTATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR TCA 90 bp GCAAAGGTTACAATGCGCGTGTCGTCTCCTTGTGCTTCTCAGAGGGATGTGTGTAGGAGGAAAGGCCACTaGCTGAGGACCTCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: AKVTMRVSSPCASQRDVCRRKGH*LRTSAS
Trigger: AGAAGCTGAGGTCCTCAGTCAGTGGCCTTTCCTCCT...ACACACATCCCTCTGAGAAGCACAAGGAGACGACACGCGCATTGTAACCTTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR TCA 90 bp CCAATGCAGCTGCTCACAGGTCCTGTTCTGGGATTGAAGACCAAGACACAGCTAAGGAGGAAAGGCCACTaGCTGAGGACCTCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: PMQLLTGPVLGLKTKTQLRRKGH*LRTSAS
Trigger: AGAAGCTGAGGTCCTCAGTCAGTGGCCTTTCCTCCT...TAGCTGTGTCTTGGTCTTCAATCCCAGAACAGGACCTGTGAGCAGCTGCATTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR TCA 90 bp CTATGGTCAAGACTCCTTCCTTACCACAGACAAGAGGAAAGATCTGCCCCGGAGGCATGGGCTTCACCTTaGAGTCTTCAGCGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: LWSRLLPYHRQEERSAPEAWASP*SLQRCR
Trigger: TCTGCAGCGCTGAAGACTTCAAGGTGAAGCCCATGC...CTCCGGGGCAGATCTTTCCTCTTGTCTGTGGTAAGGAAGGAGTCTTGACCATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453327.7
ENST00000550558.5
CDS-3UTR TCA 90 bp AAGAATGGGATAGAGGCAGAGAGAGGACTCTATGGTCAAGACTCCTTCCTTACCATGTCCTGCTGCTGCTaGTGGTGGTGGGGACCCCAA +
Preference number: 4 (lower is better)
Translates to: KNGIEAERGLYGQDSFLTMSCCC*WWWGPQ
Trigger: TTGGGGTCCCCACCACCATCAGCAGCAGCAGGACAT...GGTAAGGAAGGAGTCTTGACCATAGAGTCCTCTCTCTGCCTCTATCCCATTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552438.5
CDS-3UTR TCA 90 bp TGTGCTTCTCAGAGGGATGTGTGTACACAGTACAGACACCAGGGGAGAGAGTCCTCACGTGTGGGTAGCTaGGGTAATAAGCAACGCGGT +
Preference number: 4 (lower is better)
Translates to: CASQRDVCTQYRHQGRESSRVGS*GNKQRG
Trigger: ACCGCGTTGCTTATTACCTCAGCTACCCACACGTGA...GGACTCTCTCCCCTGGTGTCTGTACTGTGTACACACATCCCTCTGAGAAGCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552438.5
CDS-3UTR GCA 90 bp AAGACTCCTTCCTTACCACAGACAAGAGGAAAGATCTGCCCCGGAGTGTGGGGACTGCACTTTGATGCCTaGTTCGAAGGACGTCTCGTC +
Preference number: 4 (lower is better)
Translates to: KTPSLPQTRGKICPGVWGLHFDA*FEGRLV
Trigger: GACGAGACGTCCTTCGAAGCAGGCATCAAAGTGCAG...TCCCCACACTCCGGGGCAGATCTTTCCTCTTGTCTGTGGTAAGGAAGGAGTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000453327.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR GCA 90 bp CATAAGAAAATTTATGGACGTGGCCCTCTACAAGGGCCTCCGGGAGAGGGACCACTGCACTTTGATGCCTaGTTCGAAGGACGTCTCGTC +
Preference number: 4 (lower is better)
Translates to: HKKIYGRGPLQGPPGEGPLHFDA*FEGRLV
Trigger: GACGAGACGTCCTTCGAAGCAGGCATCAAAGTGCAG...TGGTCCCTCTCCCGGAGGCCCTTGTAGAGGGCCACGTCCATAAATTTTCTTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR GCA 90 bp AAGACTCCTTCCTTACCACAGACAAGAGGAAAGATCTGCCCCGGAGTGTGGGGACATAGCGGGTCAGGTTaGAAGGCATTTCACACACGC +
Preference number: 4 (lower is better)
Translates to: KTPSLPQTRGKICPGVWGHSGSG*KAFHTR
Trigger: GCGTGTGTGAAATGCCTTGCAACCTGACCCGCTATG...TCCCCACACTCCGGGGCAGATCTTTCCTCTTGTCTGTGGTAAGGAAGGAGTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000453327.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR GCA 90 bp GCGCGTGTCGTCTCCTTGTGCTTCTCAGAGGGATGTGTGTACACAGTACAGACACATAGCGGGTCAGGTTaGAAGGCATTTCACACACGC +
Preference number: 4 (lower is better)
Translates to: ARVVSLCFSEGCVYTVQTHSGSG*KAFHTR
Trigger: GCGTGTGTGAAATGCCTTGCAACCTGACCCGCTATG...TGTCTGTACTGTGTACACACATCCCTCTGAGAAGCACAAGGAGACGACACGCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR GCA 90 bp ACTGAGACAGTGCAAAGGTTACAATGCGCGTGTCGTCTCCTTGTGCTTCTCAGACGCCCTTGTCCGCACTaGTCCTTTTGGCCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: TETVQRLQCACRLLVLLRRPCPH*SFWPPS
Trigger: AGAAGGAGGCCAAAAGGAGCAGTGCGGACAAGGGCG...TCTGAGAAGCACAAGGAGACGACACGCGCATTGTAACCTTTGCACTGTCTCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
ENST00000552633.2
CDS-3UTR GCA 90 bp ACTCTATGGTCAAGACTCCTTCCTTACCACAGACAAGAGGAAAGATCTGCCCCGCGCCCTTGTCCGCACTaGTCCTTTTGGCCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: TLWSRLLPYHRQEERSAPRPCPH*SFWPPS
Trigger: AGAAGGAGGCCAAAAGGAGCAGTGCGGACAAGGGCG...CGGGGCAGATCTTTCCTCTTGTCTGTGGTAAGGAAGGAGTCTTGACCATAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000453327.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR GCA 90 bp ACAGTACAGACACCAGGGGAGAGAGTCCAACTCACAGACAAGAGGAAAGATCTGCGCCCTTGTCCGCACTaGTCCTTTTGGCCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: TVQTPGERVQLTDKRKDLRPCPH*SFWPPS
Trigger: AGAAGGAGGCCAAAAGGAGCAGTGCGGACAAGGGCG...CAGATCTTTCCTCTTGTCTGTGAGTTGGACTCTCTCCCCTGGTGTCTGTACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552633.2
CDS-3UTR GCA 90 bp GCTTCTCAGAGGGATGTGTGTACACAGTACAGACACCAGGGGAGAGAGTCCAACATGGTGAGGAAGGGCTaGCTCTTGGGATTTCTCTCC +
Preference number: 4 (lower is better)
Translates to: ASQRDVCTQYRHQGRESNMVRKG*LLGFLS
Trigger: GGAGAGAAATCCCAAGAGGCAGCCCTTCCTCACCAT...GTTGGACTCTCTCCCCTGGTGTCTGTACTGTGTACACACATCCCTCTGAGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR GCA 90 bp GAGACAGTGCAAAGGTTACAATGCGCGTGTCGTCTCCTTGTGCTTCTCAGAGGGATGGTGAGGAAGGGCTaGCTCTTGGGATTTCTCTCC +
Preference number: 4 (lower is better)
Translates to: ETVQRLQCACRLLVLLRGMVRKG*LLGFLS
Trigger: GGAGAGAAATCCCAAGAGGCAGCCCTTCCTCACCAT...CCCTCTGAGAAGCACAAGGAGACGACACGCGCATTGTAACCTTTGCACTGTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR GCA 90 bp GCTTCCTTTGTCGCCACTGAGACAGTGCAAAGGTTACAATGCGCGTGTCGTCTCCGTGTCGTCTCCTTGTaGTTCTCAGAGGGATGTGTG +
Preference number: 4 (lower is better)
Translates to: ASFVATETVQRLQCACRLRVVSL*FSEGCV
Trigger: CACACATCCCTCTGAGAAGCACAAGGAGACGACACG...GAGACGACACGCGCATTGTAACCTTTGCACTGTCTCAGTGGCGACAAAGGAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR GCA 90 bp ACTCTATGGTCAAGACTCCTTCCTTACCACAGACAAGAGGAAAGATCTGCCCCGCTGTCAGCATCCCACTaGCCCAACTTCAGGAGTCGC +
Preference number: 4 (lower is better)
Translates to: TLWSRLLPYHRQEERSAPLSASH*PNFRSR
Trigger: GCGACTCCTGAAGTTGGGGCAGTGGGATGCTGACAG...CGGGGCAGATCTTTCCTCTTGTCTGTGGTAAGGAAGGAGTCTTGACCATAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR GCA 90 bp ACTCTATGGTCAAGACTCCTTCCTTACCACAGACAAGAGGAAAGATCTGCCCCGGAGGACCTCAGCTTCTaGCTGTCAGCATCCCACTGC +
Preference number: 4 (lower is better)
Translates to: TLWSRLLPYHRQEERSAPEDLSF*LSASHC
Trigger: GCAGTGGGATGCTGACAGGCAGAAGCTGAGGTCCTC...CGGGGCAGATCTTTCCTCTTGTCTGTGGTAAGGAAGGAGTCTTGACCATAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR GCA 90 bp ACTGAGACAGTGCAAAGGTTACAATGCGCGTGTCGTCTCCTTGTGCTTCTCAGAACCCAGAGCCCTGCCTaGTGTTCCCCTATCCAATGC +
Preference number: 4 (lower is better)
Translates to: TETVQRLQCACRLLVLLRTQSPA*CSPIQC
Trigger: GCATTGGATAGGGGAACAGCAGGCAGGGCTCTGGGT...TCTGAGAAGCACAAGGAGACGACACGCGCATTGTAACCTTTGCACTGTCTCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR GCA 90 bp AAGACTCCTTCCTTACCACAGACAAGAGGAAAGATCTGCCCCGGAGTGTGGGGAAGCTCCTTTGCCACCTaGATGGGCTTCACCTTGAAG +
Preference number: 4 (lower is better)
Translates to: KTPSLPQTRGKICPGVWGSSFAT*MGFTLK
Trigger: CTTCAAGGTGAAGCCCATGCAGGTGGCAAAGGAGCT...TCCCCACACTCCGGGGCAGATCTTTCCTCTTGTCTGTGGTAAGGAAGGAGTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453327.7
ENST00000550558.5
CDS-3UTR GCA 90 bp AAGGTTACAATGCGCGTGTCGTCTCCTTGTGCTTCTCAGAGGGATGTGTGTACATCGCCTGAGCTCCTTTaGCACCTGCATGGGCTTCAC +
Preference number: 4 (lower is better)
Translates to: KVTMRVSSPCASQRDVCTSPELL*HLHGLH
Trigger: GTGAAGCCCATGCAGGTGGCAAAGGAGCTCAGGCGA...TGTACACACATCCCTCTGAGAAGCACAAGGAGACGACACGCGCATTGTAACCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550558.5
CDS-3UTR CCA 90 bp CCAATGCAGCTGCTCACAGGTCCTGTTCTGGGATTGAAGACCAAGACACAGCTACTCTGGAGTACAGTATaGGGCATCCCCTGGCATGTG +
Preference number: 4 (lower is better)
Translates to: PMQLLTGPVLGLKTKTQLLWSTV*GIPWHV
Trigger: CACATGCCAGGGGATGCCCCATACTGTACTCCAGAG...TAGCTGTGTCTTGGTCTTCAATCCCAGAACAGGACCTGTGAGCAGCTGCATTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR CCA 90 bp GTTACAATGCGCGTGTCGTCTCCTTGTGCTTCTCAGAGGGATGTGTGTACACAGCTCTGGAGTACAGTATaGGGCATCCCCTGGCATGTG +
Preference number: 4 (lower is better)
Translates to: VTMRVSSPCASQRDVCTQLWSTV*GIPWHV
Trigger: CACATGCCAGGGGATGCCCCATACTGTACTCCAGAG...CTGTGTACACACATCCCTCTGAGAAGCACAAGGAGACGACACGCGCATTGTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CCA 90 bp CTATGGTCAAGACTCCTTCCTTACCACAGACAAGAGGAAAGATCTGCCCCGGAGCACACGCAGTACTCCTaGTCCTTCTCCACCAGGAAG +
Preference number: 4 (lower is better)
Translates to: LWSRLLPYHRQEERSAPEHTQYS*SFSTRK
Trigger: CTTCCTGGTGGAGAAGGACCAGGAGTACTGCGTGTG...CTCCGGGGCAGATCTTTCCTCTTGTCTGTGGTAAGGAAGGAGTCTTGACCATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000453327.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CCA 90 bp ACTTATAGGTATCAGGATGTAGCCTACAGCACCAGGGCCGCATCTTGTCCCCATCACACGCAGTACTCCTaGTCCTTCTCCACCAGGAAG +
Preference number: 4 (lower is better)
Translates to: TYRYQDVAYSTRAASCPHHTQYS*SFSTRK
Trigger: CTTCCTGGTGGAGAAGGACCAGGAGTACTGCGTGTG...ATGGGGACAAGATGCGGCCCTGGTGCTGTAGGCTACATCCTGATACCTATAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CCA 90 bp GACAGTGCAAAGGTTACAATGCGCGTGTCGTCTCCTTGTGCTTCTCAGAGGGATTCTTGGCCAGGTACTTaGCTGAGGCTTTGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: DSAKVTMRVSSPCASQRDSWPGT*LRLCWG
Trigger: TCCCCAGCAAAGCCTCAGCCAAGTACCTGGCCAAGA...ATCCCTCTGAGAAGCACAAGGAGACGACACGCGCATTGTAACCTTTGCACTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CCA 90 bp ACAGCTTCCTTTGTCGCCACTGAGACAGTGCAAAGGTTACAATGCGCGTGTCGTTCTTGGCCAGGTACTTaGCTGAGGCTTTGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: TASFVATETVQRLQCACRSWPGT*LRLCWG
Trigger: TCCCCAGCAAAGCCTCAGCCAAGTACCTGGCCAAGA...ACGACACGCGCATTGTAACCTTTGCACTGTCTCAGTGGCGACAAAGGAAGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CCA 90 bp ACTGAGACAGTGCAAAGGTTACAATGCGCGTGTCGTCTCCTTGTGCTTCTCAGAGGTGGAGGACCCTCATaGGACAGAAGTGAGCACCCT +
Preference number: 4 (lower is better)
Translates to: TETVQRLQCACRLLVLLRGGGPS*DRSEHP
Trigger: AGGGTGCTCACTTCTGTCCCATGAGGGTCCTCCACC...TCTGAGAAGCACAAGGAGACGACACGCGCATTGTAACCTTTGCACTGTCTCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000228468.8
CDS-3UTR CCA 90 bp ACTCTATGGTCAAGACTCCTTCCTTACCACAGACAAGAGGAAAGATCTGCCCCGCAAGACAACAGGGTTTaGGGAAGGGCCTCTGGGGTG +
Preference number: 4 (lower is better)
Translates to: TLWSRLLPYHRQEERSAPQDNRV*GRASGV
Trigger: CACCCCAGAGGCCCTTCCCCAAACCCTGTTGTCTTG...CGGGGCAGATCTTTCCTCTTGTCTGTGGTAAGGAAGGAGTCTTGACCATAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000228468.8
CDS-3UTR CCA 90 bp AAGTTGGGGAAGAGGATGTGGGAGAGTTCCATAAGAAAATTTATGGACGTGGCCATCTGCCCCGGAGTGTaGGGAGTCCCCAGGGCAGAT +
Preference number: 4 (lower is better)
Translates to: KLGKRMWESSIRKFMDVAICPGV*GVPRAD
Trigger: ATCTGCCCTGGGGACTCCCCACACTCCGGGGCAGAT...GGCCACGTCCATAAATTTTCTTATGGAACTCTCCCACATCCTCTTCCCCAACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CCA 90 bp CTTCTCAGAGGGATGTGTGTACACAGTACAGACACCAGGGGAGAGAGTCCAACTAGACAGAATTCAGGCTaGGAGCTAGGGGAGGCAGCA +
Preference number: 4 (lower is better)
Translates to: LLRGMCVHSTDTRGESPTRQNSG*ELGEAA
Trigger: TGCTGCCTCCCCTAGCTCCCAGCCTGAATTCTGTCT...AGTTGGACTCTCTCCCCTGGTGTCTGTACTGTGTACACACATCCCTCTGAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CCA 90 bp AAGGTTACAATGCGCGTGTCGTCTCCTTGTGCTTCTCAGAGGGATGTGTGTACACCTTCCACCCCTCACTaGGAAGGGCCTTTGGTGACT +
Preference number: 4 (lower is better)
Translates to: KVTMRVSSPCASQRDVCTPSTPH*EGPLVT
Trigger: AGTCACCAAAGGCCCTTCCCAGTGAGGGGTGGAAGG...TGTACACACATCCCTCTGAGAAGCACAAGGAGACGACACGCGCATTGTAACCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CCA 90 bp CGTCTCCTTGTGCTTCTCAGAGGGATGTGTGTACACAGTACAGACACCAGGGGACTTGGGGTGGGAGAATaGTTCTCAGAGACAAGAGGG +
Preference number: 4 (lower is better)
Translates to: RLLVLLRGMCVHSTDTRGLGVGE*FSETRG
Trigger: CCCTCTTGTCTCTGAGAACCATTCTCCCACCCCAAG...TCCCCTGGTGTCTGTACTGTGTACACACATCCCTCTGAGAAGCACAAGGAGACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CCA 90 bp ACTTGGCTTAGTGTCCAGGGTAGACCTCCATCCCCTGGGTGGGGGCTATCTCTAATAGAAGGTGGAACTTaGGGTGGGAGAATGGTTCTC +
Preference number: 4 (lower is better)
Translates to: TWLSVQGRPPSPGWGLSLIEGGT*GGRMVL
Trigger: GAGAACCATTCTCCCACCCCAAGTTCCACCTTCTAT...TAGAGATAGCCCCCACCCAGGGGATGGAGGTCTACCCTGGACACTAAGCCAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CCA 90 bp TATGGTCAAGACTCCTTCCTTACCACAGACAAGAGGAAAGATCTGCCCCGGAGTGTGAGGAAAGGGGGCTaGGCACCCAGAAGGAGGAAA +
Preference number: 4 (lower is better)
Translates to: YGQDSFLTTDKRKDLPRSVRKGG*APRRRK
Trigger: TTTCCTCCTTCTGGGTGCCCAGCCCCCTTTCCTCAC...ACTCCGGGGCAGATCTTTCCTCTTGTCTGTGGTAAGGAAGGAGTCTTGACCATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CCA 90 bp ACTTGGCTTAGTGTCCAGGGTAGACCTCCATCCCCTGGGTGGGGGCTATCTCTACCAATGCACACTTTTTaGCCTCATTCCTGCTTCCCT +
Preference number: 4 (lower is better)
Translates to: TWLSVQGRPPSPGWGLSLPMHTF*PHSCFP
Trigger: AGGGAAGCAGGAATGAGGCCAAAAAGTGTGCATTGG...TAGAGATAGCCCCCACCCAGGGGATGGAGGTCTACCCTGGACACTAAGCCAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR CCA 90 bp ACAGCTTCCTTTGTCGCCACTGAGACAGTGCAAAGGTTACAATGCGCGTGTCGTGCCCTCTGTGTGCCCTaGAAAACTGTTCCTGGTAGG +
Preference number: 4 (lower is better)
Translates to: TASFVATETVQRLQCACRALCVP*KTVPGR
Trigger: CCTACCAGGAACAGTTTTCCAGGGCACACAGAGGGC...ACGACACGCGCATTGTAACCTTTGCACTGTCTCAGTGGCGACAAAGGAAGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550558.5
CDS-3UTR CCA 90 bp ACTCTATGGTCAAGACTCCTTCCTTACCACAGACAAGAGGAAAGATCTGCCCCGGTGAATGCCCCTCACTaGCCTCCTTCCTCACTGCCT +
Preference number: 4 (lower is better)
Translates to: TLWSRLLPYHRQEERSAPVNAPH*PPSSLP
Trigger: AGGCAGTGAGGAAGGAGGCCAGTGAGGGGCATTCAC...CGGGGCAGATCTTTCCTCTTGTCTGTGGTAAGGAAGGAGTCTTGACCATAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552438.5
CDS-3UTR CCA 90 bp TGCTTCTCAGAGGGATGTGTGTACACAGTACAGACACCAGGGGAGAGAGTCCAAGGAAGGCCAGCTCCGTaGTGGCCACTTCGTTTAGAA +
Preference number: 4 (lower is better)
Translates to: CFSEGCVYTVQTPGERVQGRPAP*WPLRLE
Trigger: TTCTAAACGAAGTGGCCACCACGGAGCTGGCCTTCC...TTGGACTCTCTCCCCTGGTGTCTGTACTGTGTACACACATCCCTCTGAGAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552438.5
CDS-3UTR TCA 90 bp CTATGGTCAAGACTCCTTCCTTACCACAGACAAGAGGAAAGATCTGCCCCGGAGCATCTCGGCCCGAGTTaGACGTGTAGCACTTTCCAT +
Preference number: 4 (lower is better)
Translates to: LWSRLLPYHRQEERSAPEHLGPS*TCSTFH
Trigger: ATGGAAAGTGCTACACGTTCAACTCGGGCCGAGATG...CTCCGGGGCAGATCTTTCCTCTTGTCTGTGGTAAGGAAGGAGTCTTGACCATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000453327.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR TCA 90 bp TCCTTTGTCGCCACTGAGACAGTGCAAAGGTTACAATGCGCGTGTCGTCTCCTTCATCTCGGCCCGAGTTaGACGTGTAGCACTTTCCAT +
Preference number: 4 (lower is better)
Translates to: SFVATETVQRLQCACRLLHLGPS*TCSTFH
Trigger: ATGGAAAGTGCTACACGTTCAACTCGGGCCGAGATG...AAGGAGACGACACGCGCATTGTAACCTTTGCACTGTCTCAGTGGCGACAAAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR TCA 90 bp GCGCGTGTCGTCTCCTTGTGCTTCTCAGAGGGATGTGTGTACACAGTACAGACATATGGATCTGCACTTTaGTGCCTGCTTCGAAGGACG +
Preference number: 4 (lower is better)
Translates to: ARVVSLCFSEGCVYTVQTYGSAL*CLLRRT
Trigger: CGTCCTTCGAAGCAGGCATCAAAGTGCAGATCCATA...TGTCTGTACTGTGTACACACATCCCTCTGAGAAGCACAAGGAGACGACACGCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR TCA 90 bp GAGACAGTGCAAAGGTTACAATGCGCGTGTCGTCTCCTTGTGCTTCTCAGAGGGTATGGATCTGCACTTTaGTGCCTGCTTCGAAGGACG +
Preference number: 4 (lower is better)
Translates to: ETVQRLQCACRLLVLLRGYGSAL*CLLRRT
Trigger: CGTCCTTCGAAGCAGGCATCAAAGTGCAGATCCATA...CCCTCTGAGAAGCACAAGGAGACGACACGCGCATTGTAACCTTTGCACTGTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR TCA 90 bp ACTCTATGGTCAAGACTCCTTCCTTACCACAGACAAGAGGAAAGATCTGCCCCGAGCCCAGCTGGTCGATaGAAGGAGGTTCATCCTGAC +
Preference number: 4 (lower is better)
Translates to: TLWSRLLPYHRQEERSAPSPAGR*KEVHPD
Trigger: GTCAGGATGAACCTCCTTTCATCGACCAGCTGGGCT...CGGGGCAGATCTTTCCTCTTGTCTGTGGTAAGGAAGGAGTCTTGACCATAGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000453327.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR TCA 90 bp AGGACTCTATGGTCAAGACTCCTTCCTTACCACAGACAAGAGGAAAGATCTGCCCGATGCGGCAGGCAGTaGTGCTGTAGGAGTCGAAGA +
Preference number: 4 (lower is better)
Translates to: RTLWSRLLPYHRQEERSARCGRQ*CCRSRR
Trigger: TCTTCGACTCCTACAGCATCACTGCCTGCCGCATCG...GGCAGATCTTTCCTCTTGTCTGTGGTAAGGAAGGAGTCTTGACCATAGAGTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000453327.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR TCA 90 bp TTGTGCTTCTCAGAGGGATGTGTGTACACAGTACAGACACCAGGGGAGAGAGTCCTCATGGGACAGAAGTaGGCACCCTGCTTTTGGATG +
Preference number: 4 (lower is better)
Translates to: LCFSEGCVYTVQTPGERVLMGQK*APCFWM
Trigger: CATCCAAAAGCAGGGTGCTCACTTCTGTCCCATGAG...GACTCTCTCCCCTGGTGTCTGTACTGTGTACACACATCCCTCTGAGAAGCACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000228468.8
CDS-3UTR TCA 90 bp ACTCTATGGTCAAGACTCCTTCCTTACCACAGACAAGAGGAAAGATCTGCCCCGGTGAGAGAGTGGGGCTaGGGTTTTAGTTCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: TLWSRLLPYHRQEERSAPVREWG*GFSSCQ
Trigger: CTGGCAGGAACTAAAACCTCAGCCCCACTCTCTCAC...CGGGGCAGATCTTTCCTCTTGTCTGTGGTAAGGAAGGAGTCTTGACCATAGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR TCA 90 bp GTTACAATGCGCGTGTCGTCTCCTTGTGCTTCTCAGAGGGATGTGTGTACACAGAGATTCCACATGGTGTaGGAGAGTGGGGCTGAGGTT +
Preference number: 4 (lower is better)
Translates to: VTMRVSSPCASQRDVCTQRFHMV*ESGAEV
Trigger: AACCTCAGCCCCACTCTCTCACACCATGTGGAATCT...CTGTGTACACACATCCCTCTGAGAAGCACAAGGAGACGACACGCGCATTGTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR TCA 90 bp TCCTTTGTCGCCACTGAGACAGTGCAAAGGTTACAATGCGCGTGTCGTCTCCTTGCTGTGGGGTGGGGGTaGACTTATAGGTATCAGGAT +
Preference number: 4 (lower is better)
Translates to: SFVATETVQRLQCACRLLAVGWG*TYRYQD
Trigger: ATCCTGATACCTATAAGTTCACCCCCACCCCACAGC...AAGGAGACGACACGCGCATTGTAACCTTTGCACTGTCTCAGTGGCGACAAAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR TCA 90 bp TATGGTCAAGACTCCTTCCTTACCACAGACAAGAGGAAAGATCTGCCCCGGAGTAGGAGGAAAGGCCACTaGCTGAGGACCTCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: YGQDSFLTTDKRKDLPRSRRKGH*LRTSAS
Trigger: AGAAGCTGAGGTCCTCAGTCAGTGGCCTTTCCTCCT...ACTCCGGGGCAGATCTTTCCTCTTGTCTGTGGTAAGGAAGGAGTCTTGACCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR GCA 90 bp CGTCTCCTTGTGCTTCTCAGAGGGATGTGTGTACACAGTACAGACACCAGGGGAGCACACTCCTTGTACTaGTCTGGAGTACAGTATGGG +
Preference number: 4 (lower is better)
Translates to: RLLVLLRGMCVHSTDTRGAHSLY*SGVQYG
Trigger: CCCATACTGTACTCCAGAGCAGTACAAGGAGTGTGC...TCCCCTGGTGTCTGTACTGTGTACACACATCCCTCTGAGAAGCACAAGGAGACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR GCA 90 bp GTGTCGTCTCCTTGTGCTTCTCAGAGGGATGTGTGTACACAGTACAGACACCAGCATAGCGGGTCAGGTTaGAAGGCATTTCACACACGC +
Preference number: 4 (lower is better)
Translates to: VSSPCASQRDVCTQYRHQHSGSG*KAFHTR
Trigger: GCGTGTGTGAAATGCCTTGCAACCTGACCCGCTATG...CTGGTGTCTGTACTGTGTACACACATCCCTCTGAGAAGCACAAGGAGACGACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR GCA 90 bp AGTGCAAAGGTTACAATGCGCGTGTCGTCTCCTTGTGCTTCTCAGAGGGATGTGCATAGCGGGTCAGGTTaGAAGGCATTTCACACACGC +
Preference number: 4 (lower is better)
Translates to: SAKVTMRVSSPCASQRDVHSGSG*KAFHTR
Trigger: GCGTGTGTGAAATGCCTTGCAACCTGACCCGCTATG...CACATCCCTCTGAGAAGCACAAGGAGACGACACGCGCATTGTAACCTTTGCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR GCA 90 bp TCCTTTGTCGCCACTGAGACAGTGCAAAGGTTACAATGCGCGTGTCGTCTCCTTCATAGCGGGTCAGGTTaGAAGGCATTTCACACACGC +
Preference number: 4 (lower is better)
Translates to: SFVATETVQRLQCACRLLHSGSG*KAFHTR
Trigger: GCGTGTGTGAAATGCCTTGCAACCTGACCCGCTATG...AAGGAGACGACACGCGCATTGTAACCTTTGCACTGTCTCAGTGGCGACAAAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR GCA 90 bp GTTACAATGCGCGTGTCGTCTCCTTGTGCTTCTCAGAGGGATGTGTGTACACAGATGGTGAGGAAGGGCTaGCTCTTGGGATTTCTCTCC +
Preference number: 4 (lower is better)
Translates to: VTMRVSSPCASQRDVCTQMVRKG*LLGFLS
Trigger: GGAGAGAAATCCCAAGAGGCAGCCCTTCCTCACCAT...CTGTGTACACACATCCCTCTGAGAAGCACAAGGAGACGACACGCGCATTGTAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR GCA 90 bp TTGTGCTTCTCAGAGGGATGTGTGTACACAGTACAGACACCAGGGGAGAGAGTCCGTGTCGTCTCCTTGTaGTTCTCAGAGGGATGTGTG +
Preference number: 4 (lower is better)
Translates to: LCFSEGCVYTVQTPGERVRVVSL*FSEGCV
Trigger: CACACATCCCTCTGAGAAGCACAAGGAGACGACACG...GACTCTCTCCCCTGGTGTCTGTACTGTGTACACACATCCCTCTGAGAAGCACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
ENST00000552633.2
CDS-3UTR GCA 90 bp GCAAAGGTTACAATGCGCGTGTCGTCTCCTTGTGCTTCTCAGAGGGATGTGTGTCGTGTCGTCTCCTTGTaGTTCTCAGAGGGATGTGTG +
Preference number: 4 (lower is better)
Translates to: AKVTMRVSSPCASQRDVCRVVSL*FSEGCV
Trigger: CACACATCCCTCTGAGAAGCACAAGGAGACGACACG...ACACACATCCCTCTGAGAAGCACAAGGAGACGACACGCGCATTGTAACCTTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
ENST00000552633.2
CDS-3UTR GCA 90 bp ATAAGAAAATTTATGGACGTGGCCCTCTACAAGGGCCTCCGGGAGAGGGACCAGGTGCAAAGGTTACAATaGGCGTGTCGTCTCCTTGTG +
Preference number: 4 (lower is better)
Translates to: IRKFMDVALYKGLRERDQVQRLQ*ACRLLV
Trigger: CACAAGGAGACGACACGCGCATTGTAACCTTTGCAC...CTGGTCCCTCTCCCGGAGGCCCTTGTAGAGGGCCACGTCCATAAATTTTCTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR GCA 90 bp GAGACAGTGCAAAGGTTACAATGCGCGTGTCGTCTCCTTGTGCTTCTCAGAGGGGTGCAAAGGTTACAATaGGCGTGTCGTCTCCTTGTG +
Preference number: 4 (lower is better)
Translates to: ETVQRLQCACRLLVLLRGVQRLQ*ACRLLV
Trigger: CACAAGGAGACGACACGCGCATTGTAACCTTTGCAC...CCCTCTGAGAAGCACAAGGAGACGACACGCGCATTGTAACCTTTGCACTGTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
ENST00000552633.2
CDS-3UTR GCA 90 bp GCTTCTCAGAGGGATGTGTGTACACAGTACAGACACCAGGGGAGAGAGTCCAACTTTTGGCCTCATTCCTaGTTCCCTCTGGGGAGGTAT +
Preference number: 4 (lower is better)
Translates to: ASQRDVCTQYRHQGRESNFWPHS*FPLGRY
Trigger: ATACCTCCCCAGAGGGAAGCAGGAATGAGGCCAAAA...GTTGGACTCTCTCCCCTGGTGTCTGTACTGTGTACACACATCCCTCTGAGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR CCA 90 bp AAGTTGGGGAAGAGGATGTGGGAGAGTTCCATAAGAAAATTTATGGACGTGGCCGCAGTGTGGAGCTGCTaGCGAAGGCCTGGATGCTCA +
Preference number: 4 (lower is better)
Translates to: KLGKRMWESSIRKFMDVAAVWSC*RRPGCS
Trigger: TGAGCATCCAGGCCTTCGCCAGCAGCTCCACACTGC...GGCCACGTCCATAAATTTTCTTATGGAACTCTCCCACATCCTCTTCCCCAACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR CCA 90 bp TATGGTCAAGACTCCTTCCTTACCACAGACAAGAGGAAAGATCTGCCCCGGAGTCTCTGGAGTACAGTATaGGGCATCCCCTGGCATGTG +
Preference number: 4 (lower is better)
Translates to: YGQDSFLTTDKRKDLPRSLWSTV*GIPWHV
Trigger: CACATGCCAGGGGATGCCCCATACTGTACTCCAGAG...ACTCCGGGGCAGATCTTTCCTCTTGTCTGTGGTAAGGAAGGAGTCTTGACCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000453327.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CCA 90 bp TATGGTCAAGACTCCTTCCTTACCACAGACAAGAGGAAAGATCTGCCCCGGAGTCACACGCAGTACTCCTaGTCCTTCTCCACCAGGAAG +
Preference number: 4 (lower is better)
Translates to: YGQDSFLTTDKRKDLPRSHTQYS*SFSTRK
Trigger: CTTCCTGGTGGAGAAGGACCAGGAGTACTGCGTGTG...ACTCCGGGGCAGATCTTTCCTCTTGTCTGTGGTAAGGAAGGAGTCTTGACCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000453327.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CCA 90 bp ACTCTATGGTCAAGACTCCTTCCTTACCACAGACAAGAGGAAAGATCTGCCCCGCACACGCAGTACTCCTaGTCCTTCTCCACCAGGAAG +
Preference number: 4 (lower is better)
Translates to: TLWSRLLPYHRQEERSAPHTQYS*SFSTRK
Trigger: CTTCCTGGTGGAGAAGGACCAGGAGTACTGCGTGTG...CGGGGCAGATCTTTCCTCTTGTCTGTGGTAAGGAAGGAGTCTTGACCATAGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000453327.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CCA 90 bp CTATGGTCAAGACTCCTTCCTTACCACAGACAAGAGGAAAGATCTGCCCCGGAGCCGCACTGCTCCTTTTaGCCTCCTTCTGGCATTTTC +
Preference number: 4 (lower is better)
Translates to: LWSRLLPYHRQEERSAPEPHCSF*PPSGIF
Trigger: GAAAATGCCAGAAGGAGGCCAAAAGGAGCAGTGCGG...CTCCGGGGCAGATCTTTCCTCTTGTCTGTGGTAAGGAAGGAGTCTTGACCATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000453327.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CCA 90 bp CAGTGCAAAGGTTACAATGCGCGTGTCGTCTCCTTGTGCTTCTCAGAGGGATGTCCGCACTGCTCCTTTTaGCCTCCTTCTGGCATTTTC +
Preference number: 4 (lower is better)
Translates to: QCKGYNARVVSLCFSEGCPHCSF*PPSGIF
Trigger: GAAAATGCCAGAAGGAGGCCAAAAGGAGCAGTGCGG...ACATCCCTCTGAGAAGCACAAGGAGACGACACGCGCATTGTAACCTTTGCACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
ENST00000552633.2
CDS-3UTR CCA 90 bp AAGGTTACAATGCGCGTGTCGTCTCCTTGTGCTTCTCAGAGGGATGTGTGTACAAGACAGAATTCAGGCTaGGAGCTAGGGGAGGCAGCA +
Preference number: 4 (lower is better)
Translates to: KVTMRVSSPCASQRDVCTRQNSG*ELGEAA
Trigger: TGCTGCCTCCCCTAGCTCCCAGCCTGAATTCTGTCT...TGTACACACATCCCTCTGAGAAGCACAAGGAGACGACACGCGCATTGTAACCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CCA 90 bp GCCTTTGGTGACTGGTGGCAGCAGAATGTAGATGGACACTCAGATGGCAGACAGAGGGCCTTTGGTGACTaGTGGCAGCAGAATGTAGAT +
Preference number: 4 (lower is better)
Translates to: AFGDWWQQNVDGHSDGRQRAFGD*WQQNVD
Trigger: ATCTACATTCTGCTGCCACCAGTCACCAAAGGCCCT...CTGTCTGCCATCTGAGTGTCCATCTACATTCTGCTGCCACCAGTCACCAAAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CCA 90 bp GCCTTTGGTGACTGGTGGCAGCAGAATGTAGATGGACACTCAGATGGCAGACAGGAAAATTTATGGACGTaGCCCTCTACAAGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: AFGDWWQQNVDGHSDGRQENLWT*PSTRAS
Trigger: GGAGGCCCTTGTAGAGGGCCACGTCCATAAATTTTC...CTGTCTGCCATCTGAGTGTCCATCTACATTCTGCTGCCACCAGTCACCAAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CCA 90 bp CATCCCACTGCCCCAACTTCAGGAGTCGCCAATCCCCAGCTCCCTTCTGTCTCTTTGGGGAAGAGGATGTaGGAGAGTTCCATAAGAAAA +
Preference number: 4 (lower is better)
Translates to: HPTAPTSGVANPQLPSVSLGKRM*ESSIRK
Trigger: TTTTCTTATGGAACTCTCCCACATCCTCTTCCCCAA...AGAGACAGAAGGGAGCTGGGGATTGGCGACTCCTGAAGTTGGGGCAGTGGGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CCA 90 bp GCCTTTGGTGACTGGTGGCAGCAGAATGTAGATGGACACTCAGATGGCAGACAGAGGTGGAACTTGGGGTaGGAGAATGGTTCTCAGAGA +
Preference number: 4 (lower is better)
Translates to: AFGDWWQQNVDGHSDGRQRWNLG*ENGSQR
Trigger: TCTCTGAGAACCATTCTCCCACCCCAAGTTCCACCT...CTGTCTGCCATCTGAGTGTCCATCTACATTCTGCTGCCACCAGTCACCAAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CCA 90 bp AAGAATGGGATAGAGGCAGAGAGAGGACTCTATGGTCAAGACTCCTTCCTTACCGTGAGGAAAGGGGGCTaGGCACCCAGAAGGAGGAAA +
Preference number: 4 (lower is better)
Translates to: KNGIEAERGLYGQDSFLTVRKGG*APRRRK
Trigger: TTTCCTCCTTCTGGGTGCCCAGCCCCCTTTCCTCAC...GGTAAGGAAGGAGTCTTGACCATAGAGTCCTCTCTCTGCCTCTATCCCATTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR TCA 90 bp TATGGTCAAGACTCCTTCCTTACCACAGACAAGAGGAAAGATCTGCCCCGGAGTCATCTCGGCCCGAGTTaGACGTGTAGCACTTTCCAT +
Preference number: 4 (lower is better)
Translates to: YGQDSFLTTDKRKDLPRSHLGPS*TCSTFH
Trigger: ATGGAAAGTGCTACACGTTCAACTCGGGCCGAGATG...ACTCCGGGGCAGATCTTTCCTCTTGTCTGTGGTAAGGAAGGAGTCTTGACCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000453327.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR TCA 90 bp CTATGGTCAAGACTCCTTCCTTACCACAGACAAGAGGAAAGATCTGCCCCGGAGTATGGATCTGCACTTTaGTGCCTGCTTCGAAGGACG +
Preference number: 4 (lower is better)
Translates to: LWSRLLPYHRQEERSAPEYGSAL*CLLRRT
Trigger: CGTCCTTCGAAGCAGGCATCAAAGTGCAGATCCATA...CTCCGGGGCAGATCTTTCCTCTTGTCTGTGGTAAGGAAGGAGTCTTGACCATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000453327.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR TCA 90 bp TGCTTCTCAGAGGGATGTGTGTACACAGTACAGACACCAGGGGAGAGAGTCCAATATGGATCTGCACTTTaGTGCCTGCTTCGAAGGACG +
Preference number: 4 (lower is better)
Translates to: CFSEGCVYTVQTPGERVQYGSAL*CLLRRT
Trigger: CGTCCTTCGAAGCAGGCATCAAAGTGCAGATCCATA...TTGGACTCTCTCCCCTGGTGTCTGTACTGTGTACACACATCCCTCTGAGAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR TCA 90 bp AGGACTCTATGGTCAAGACTCCTTCCTTACCACAGACAAGAGGAAAGATCTGCCAGCCCAGCTGGTCGATaGAAGGAGGTTCATCCTGAC +
Preference number: 4 (lower is better)
Translates to: RTLWSRLLPYHRQEERSASPAGR*KEVHPD
Trigger: GTCAGGATGAACCTCCTTTCATCGACCAGCTGGGCT...GGCAGATCTTTCCTCTTGTCTGTGGTAAGGAAGGAGTCTTGACCATAGAGTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000453327.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR TCA 90 bp AGCACCAGGATGTTCTCCCCTATGTATTGCTCAGATTTGTTGAACTTCTTGGCCGGGAAGGGCCTTTGGTaGCTGGTGGCAGCAGAATGT +
Preference number: 4 (lower is better)
Translates to: STRMFSPMYCSDLLNFLAGKGLW*LVAAEC
Trigger: ACATTCTGCTGCCACCAGTCACCAAAGGCCCTTCCC...GGCCAAGAAGTTCAACAAATCTGAGCAATACATAGGGGAGAACATCCTGGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550558.5
CDS-3UTR TCA 90 bp TTTTCCTCGTCGGCACAGCTTGTGCTTAATGACCTCGTAGGCGTAGTCAAAGAGAGATTCCACATGGTGTaGGAGAGTGGGGCTGAGGTT +
Preference number: 4 (lower is better)
Translates to: FSSSAQLVLNDLVGVVKERFHMV*ESGAEV
Trigger: AACCTCAGCCCCACTCTCTCACACCATGTGGAATCT...CTCTTTGACTACGCCTACGAGGTCATTAAGCACAAGCTGTGCCGACGAGGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550558.5
CDS-3UTR TCA 90 bp ATAAGAAAATTTATGGACGTGGCCCTCTACAAGGGCCTCCGGGAGAGGGACCAGAAGAGGCAGAGCTTGTaGTTCACAGCTTCCTTTGTC +
Preference number: 4 (lower is better)
Translates to: IRKFMDVALYKGLRERDQKRQSL*FTASFV
Trigger: GACAAAGGAAGCTGTGAATCACAAGCTCTGCCTCTT...CTGGTCCCTCTCCCGGAGGCCCTTGTAGAGGGCCACGTCCATAAATTTTCTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR TCA 90 bp GCGCGTGTCGTCTCCTTGTGCTTCTCAGAGGGATGTGTGTACACAGTACAGACAAAGAGGCAGAGCTTGTaGTTCACAGCTTCCTTTGTC +
Preference number: 4 (lower is better)
Translates to: ARVVSLCFSEGCVYTVQTKRQSL*FTASFV
Trigger: GACAAAGGAAGCTGTGAATCACAAGCTCTGCCTCTT...TGTCTGTACTGTGTACACACATCCCTCTGAGAAGCACAAGGAGACGACACGCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR GCA 90 bp CTATGGTCAAGACTCCTTCCTTACCACAGACAAGAGGAAAGATCTGCCCCGGAGGCACACTCCTTGTACTaGTCTGGAGTACAGTATGGG +
Preference number: 4 (lower is better)
Translates to: LWSRLLPYHRQEERSAPEAHSLY*SGVQYG
Trigger: CCCATACTGTACTCCAGAGCAGTACAAGGAGTGTGC...CTCCGGGGCAGATCTTTCCTCTTGTCTGTGGTAAGGAAGGAGTCTTGACCATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000453327.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR GCA 90 bp GTGTCGTCTCCTTGTGCTTCTCAGAGGGATGTGTGTACACAGTACAGACACCAGTCGCCACTGAGACAGTaGAAAGGTTACAATGCGCGT +
Preference number: 4 (lower is better)
Translates to: VSSPCASQRDVCTQYRHQSPLRQ*KGYNAR
Trigger: ACGCGCATTGTAACCTTTGCACTGTCTCAGTGGCGA...CTGGTGTCTGTACTGTGTACACACATCCCTCTGAGAAGCACAAGGAGACGACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR GCA 90 bp ACTTATAGGTATCAGGATGTAGCCTACAGCACCAGGGCCGCATCTTGTCCCCATTCGCCACTGAGACAGTaGAAAGGTTACAATGCGCGT +
Preference number: 4 (lower is better)
Translates to: TYRYQDVAYSTRAASCPHSPLRQ*KGYNAR
Trigger: ACGCGCATTGTAACCTTTGCACTGTCTCAGTGGCGA...ATGGGGACAAGATGCGGCCCTGGTGCTGTAGGCTACATCCTGATACCTATAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR GCA 90 bp ACAGCTTCCTTTGTCGCCACTGAGACAGTGCAAAGGTTACAATGCGCGTGTCGTTCGCCACTGAGACAGTaGAAAGGTTACAATGCGCGT +
Preference number: 4 (lower is better)
Translates to: TASFVATETVQRLQCACRSPLRQ*KGYNAR
Trigger: ACGCGCATTGTAACCTTTGCACTGTCTCAGTGGCGA...ACGACACGCGCATTGTAACCTTTGCACTGTCTCAGTGGCGACAAAGGAAGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR GCA 90 bp AAGTTGGGGAAGAGGATGTGGGAGAGTTCCATAAGAAAATTTATGGACGTGGCCCTGTCAGCATCCCACTaGCCCAACTTCAGGAGTCGC +
Preference number: 4 (lower is better)
Translates to: KLGKRMWESSIRKFMDVALSASH*PNFRSR
Trigger: GCGACTCCTGAAGTTGGGGCAGTGGGATGCTGACAG...GGCCACGTCCATAAATTTTCTTATGGAACTCTCCCACATCCTCTTCCCCAACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR GCA 90 bp ACTTATAGGTATCAGGATGTAGCCTACAGCACCAGGGCCGCATCTTGTCCCCATTTTTGGCCTCATTCCTaGTTCCCTCTGGGGAGGTAT +
Preference number: 4 (lower is better)
Translates to: TYRYQDVAYSTRAASCPHFWPHS*FPLGRY
Trigger: ATACCTCCCCAGAGGGAAGCAGGAATGAGGCCAAAA...ATGGGGACAAGATGCGGCCCTGGTGCTGTAGGCTACATCCTGATACCTATAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR CCA 90 bp ACTGAGACAGTGCAAAGGTTACAATGCGCGTGTCGTCTCCTTGTGCTTCTCAGACCGCACTGCTCCTTTTaGCCTCCTTCTGGCATTTTC +
Preference number: 4 (lower is better)
Translates to: TETVQRLQCACRLLVLLRPHCSF*PPSGIF
Trigger: GAAAATGCCAGAAGGAGGCCAAAAGGAGCAGTGCGG...TCTGAGAAGCACAAGGAGACGACACGCGCATTGTAACCTTTGCACTGTCTCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
ENST00000552633.2
CDS-3UTR CCA 90 bp TATGGTCAAGACTCCTTCCTTACCACAGACAAGAGGAAAGATCTGCCCCGGAGTCCGCACTGCTCCTTTTaGCCTCCTTCTGGCATTTTC +
Preference number: 4 (lower is better)
Translates to: YGQDSFLTTDKRKDLPRSPHCSF*PPSGIF
Trigger: GAAAATGCCAGAAGGAGGCCAAAAGGAGCAGTGCGG...ACTCCGGGGCAGATCTTTCCTCTTGTCTGTGGTAAGGAAGGAGTCTTGACCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000453327.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CCA 90 bp ACAGCTTCCTTTGTCGCCACTGAGACAGTGCAAAGGTTACAATGCGCGTGTCGTGCCTTTGGTGACTGGTaGCAGCAGAATGTAGATGGA +
Preference number: 4 (lower is better)
Translates to: TASFVATETVQRLQCACRAFGDW*QQNVDG
Trigger: TCCATCTACATTCTGCTGCCACCAGTCACCAAAGGC...ACGACACGCGCATTGTAACCTTTGCACTGTCTCAGTGGCGACAAAGGAAGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CCA 90 bp GACAGTGCAAAGGTTACAATGCGCGTGTCGTCTCCTTGTGCTTCTCAGAGGGATAGGGCCTTTGGTGACTaGTGGCAGCAGAATGTAGAT +
Preference number: 4 (lower is better)
Translates to: DSAKVTMRVSSPCASQRDRAFGD*WQQNVD
Trigger: ATCTACATTCTGCTGCCACCAGTCACCAAAGGCCCT...ATCCCTCTGAGAAGCACAAGGAGACGACACGCGCATTGTAACCTTTGCACTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CCA 90 bp CCAATGCAGCTGCTCACAGGTCCTGTTCTGGGATTGAAGACCAAGACACAGCTAAGGGCCTTTGGTGACTaGTGGCAGCAGAATGTAGAT +
Preference number: 4 (lower is better)
Translates to: PMQLLTGPVLGLKTKTQLRAFGD*WQQNVD
Trigger: ATCTACATTCTGCTGCCACCAGTCACCAAAGGCCCT...TAGCTGTGTCTTGGTCTTCAATCCCAGAACAGGACCTGTGAGCAGCTGCATTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR CCA 90 bp TCCTTTGTCGCCACTGAGACAGTGCAAAGGTTACAATGCGCGTGTCGTCTCCTTAGGGCCTTTGGTGACTaGTGGCAGCAGAATGTAGAT +
Preference number: 4 (lower is better)
Translates to: SFVATETVQRLQCACRLLRAFGD*WQQNVD
Trigger: ATCTACATTCTGCTGCCACCAGTCACCAAAGGCCCT...AAGGAGACGACACGCGCATTGTAACCTTTGCACTGTCTCAGTGGCGACAAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CCA 90 bp CCAATGCAGCTGCTCACAGGTCCTGTTCTGGGATTGAAGACCAAGACACAGCTAGAAAATTTATGGACGTaGCCCTCTACAAGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: PMQLLTGPVLGLKTKTQLENLWT*PSTRAS
Trigger: GGAGGCCCTTGTAGAGGGCCACGTCCATAAATTTTC...TAGCTGTGTCTTGGTCTTCAATCCCAGAACAGGACCTGTGAGCAGCTGCATTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR CCA 90 bp TCTATGGTCAAGACTCCTTCCTTACCACAGACAAGAGGAAAGATCTGCCCCGGACTTGGGGTGGGAGAATaGTTCTCAGAGACAAGAGGG +
Preference number: 4 (lower is better)
Translates to: SMVKTPSLPQTRGKICPGLGVGE*FSETRG
Trigger: CCCTCTTGTCTCTGAGAACCATTCTCCCACCCCAAG...TCCGGGGCAGATCTTTCCTCTTGTCTGTGGTAAGGAAGGAGTCTTGACCATAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CCA 90 bp TTGTGCTTCTCAGAGGGATGTGTGTACACAGTACAGACACCAGGGGAGAGAGTCAGGTGGAACTTGGGGTaGGAGAATGGTTCTCAGAGA +
Preference number: 4 (lower is better)
Translates to: LCFSEGCVYTVQTPGERVRWNLG*ENGSQR
Trigger: TCTCTGAGAACCATTCTCCCACCCCAAGTTCCACCT...GACTCTCTCCCCTGGTGTCTGTACTGTGTACACACATCCCTCTGAGAAGCACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CCA 90 bp CTTCTCAGAGGGATGTGTGTACACAGTACAGACACCAGGGGAGAGAGTCCAACTAGGTGGAACTTGGGGTaGGAGAATGGTTCTCAGAGA +
Preference number: 4 (lower is better)
Translates to: LLRGMCVHSTDTRGESPTRWNLG*ENGSQR
Trigger: TCTCTGAGAACCATTCTCCCACCCCAAGTTCCACCT...AGTTGGACTCTCTCCCCTGGTGTCTGTACTGTGTACACACATCCCTCTGAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CCA 90 bp GCGCGTGTCGTCTCCTTGTGCTTCTCAGAGGGATGTGTGTACACAGTACAGACACCAATGCACACTTTTTaGCCTCATTCCTGCTTCCCT +
Preference number: 4 (lower is better)
Translates to: ARVVSLCFSEGCVYTVQTPMHTF*PHSCFP
Trigger: AGGGAAGCAGGAATGAGGCCAAAAAGTGTGCATTGG...TGTCTGTACTGTGTACACACATCCCTCTGAGAAGCACAAGGAGACGACACGCGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR CCA 90 bp ATAAGAAAATTTATGGACGTGGCCCTCTACAAGGGCCTCCGGGAGAGGGACCAGCAGAGGAGAATGACATaGAGCAGAAGATCTGGATGG +
Preference number: 4 (lower is better)
Translates to: IRKFMDVALYKGLRERDQQRRMT*SRRSGW
Trigger: CCATCCAGATCTTCTGCTCCATGTCATTCTCCTCTG...CTGGTCCCTCTCCCGGAGGCCCTTGTAGAGGGCCACGTCCATAAATTTTCTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552438.5
CDS-3UTR TCA 90 bp AAGAATGGGATAGAGGCAGAGAGAGGACTCTATGGTCAAGACTCCTTCCTTACCCATCTCGGCCCGAGTTaGACGTGTAGCACTTTCCAT +
Preference number: 4 (lower is better)
Translates to: KNGIEAERGLYGQDSFLTHLGPS*TCSTFH
Trigger: ATGGAAAGTGCTACACGTTCAACTCGGGCCGAGATG...GGTAAGGAAGGAGTCTTGACCATAGAGTCCTCTCTCTGCCTCTATCCCATTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000453327.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR TCA 90 bp GCTTCCTTTGTCGCCACTGAGACAGTGCAAAGGTTACAATGCGCGTGTCGTCTCAAAGGAGGTTCATCCTaGCTATGGATCTGCACTTTG +
Preference number: 4 (lower is better)
Translates to: ASFVATETVQRLQCACRLKGGSS*LWICTL
Trigger: CAAAGTGCAGATCCATAGTCAGGATGAACCTCCTTT...GAGACGACACGCGCATTGTAACCTTTGCACTGTCTCAGTGGCGACAAAGGAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR TCA 90 bp AAGACTCCTTCCTTACCACAGACAAGAGGAAAGATCTGCCCCGGAGTGTGGGGAAAAGGAGGTTCATCCTaGCTATGGATCTGCACTTTG +
Preference number: 4 (lower is better)
Translates to: KTPSLPQTRGKICPGVWGKGGSS*LWICTL
Trigger: CAAAGTGCAGATCCATAGTCAGGATGAACCTCCTTT...TCCCCACACTCCGGGGCAGATCTTTCCTCTTGTCTGTGGTAAGGAAGGAGTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000453327.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR TCA 90 bp ATAAGAAAATTTATGGACGTGGCCCTCTACAAGGGCCTCCGGGAGAGGGACCAGAAAGGAGGTTCATCCTaGCTATGGATCTGCACTTTG +
Preference number: 4 (lower is better)
Translates to: IRKFMDVALYKGLRERDQKGGSS*LWICTL
Trigger: CAAAGTGCAGATCCATAGTCAGGATGAACCTCCTTT...CTGGTCCCTCTCCCGGAGGCCCTTGTAGAGGGCCACGTCCATAAATTTTCTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR TCA 90 bp ACAGCTTCCTTTGTCGCCACTGAGACAGTGCAAAGGTTACAATGCGCGTGTCGTTTCCTTTGTCGCCACTaGGACAGTGCAAAGGTTACA +
Preference number: 4 (lower is better)
Translates to: TASFVATETVQRLQCACRFLCRH*DSAKVT
Trigger: TGTAACCTTTGCACTGTCTCAGTGGCGACAAAGGAA...ACGACACGCGCATTGTAACCTTTGCACTGTCTCAGTGGCGACAAAGGAAGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR TCA 90 bp AGTGCAAAGGTTACAATGCGCGTGTCGTCTCCTTGTGCTTCTCAGAGGGATGTGTTCCTTTGTCGCCACTaGGACAGTGCAAAGGTTACA +
Preference number: 4 (lower is better)
Translates to: SAKVTMRVSSPCASQRDVFLCRH*DSAKVT
Trigger: TGTAACCTTTGCACTGTCTCAGTGGCGACAAAGGAA...CACATCCCTCTGAGAAGCACAAGGAGACGACACGCGCATTGTAACCTTTGCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR TCA 90 bp CAGTGCAAAGGTTACAATGCGCGTGTCGTCTCCTTGTGCTTCTCAGAGGGATGTTTCCTTTGTCGCCACTaGGACAGTGCAAAGGTTACA +
Preference number: 4 (lower is better)
Translates to: QCKGYNARVVSLCFSEGCFLCRH*DSAKVT
Trigger: TGTAACCTTTGCACTGTCTCAGTGGCGACAAAGGAA...ACATCCCTCTGAGAAGCACAAGGAGACGACACGCGCATTGTAACCTTTGCACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR TCA 90 bp TCCTTTGTCGCCACTGAGACAGTGCAAAGGTTACAATGCGCGTGTCGTCTCCTTTTCCTTTGTCGCCACTaGGACAGTGCAAAGGTTACA +
Preference number: 4 (lower is better)
Translates to: SFVATETVQRLQCACRLLFLCRH*DSAKVT
Trigger: TGTAACCTTTGCACTGTCTCAGTGGCGACAAAGGAA...AAGGAGACGACACGCGCATTGTAACCTTTGCACTGTCTCAGTGGCGACAAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR TCA 90 bp CCAATGCAGCTGCTCACAGGTCCTGTTCTGGGATTGAAGACCAAGACACAGCTAAAGAGGCAGAGCTTGTaGTTCACAGCTTCCTTTGTC +
Preference number: 4 (lower is better)
Translates to: PMQLLTGPVLGLKTKTQLKRQSL*FTASFV
Trigger: GACAAAGGAAGCTGTGAATCACAAGCTCTGCCTCTT...TAGCTGTGTCTTGGTCTTCAATCCCAGAACAGGACCTGTGAGCAGCTGCATTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR TCA 90 bp ACTGAGACAGTGCAAAGGTTACAATGCGCGTGTCGTCTCCTTGTGCTTCTCAGACCCTCTGGGGAGGTATaGTCTCTGAGGAAACTCTTA +
Preference number: 4 (lower is better)
Translates to: TETVQRLQCACRLLVLLRPSGEV*SLRKLL
Trigger: TAAGAGTTTCCTCAGAGATCATACCTCCCCAGAGGG...TCTGAGAAGCACAAGGAGACGACACGCGCATTGTAACCTTTGCACTGTCTCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR GCA 90 bp AAGACTCCTTCCTTACCACAGACAAGAGGAAAGATCTGCCCCGGAGTGTGGGGATGCAGTATCTCCAGCTaGTTTTCATCTGCCATCTGT +
Preference number: 4 (lower is better)
Translates to: KTPSLPQTRGKICPGVWGCSISS*FSSAIC
Trigger: ACAGATGGCAGATGAAAAGCAGCTGGAGATACTGCA...TCCCCACACTCCGGGGCAGATCTTTCCTCTTGTCTGTGGTAAGGAAGGAGTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR GCA 90 bp ACCCAGAGCCCTGCCTGCTGTTCCCCTATCCAATGCACACTTTTTGGCCTCATTAAGTTGGCTTTGTCCTaGAGTATCTCCAGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: TQSPACCSPIQCTLFGLIKLALS*SISSCF
Trigger: AAAGCAGCTGGAGATACTGCAGGACAAAGCCAACTT...AATGAGGCCAAAAAGTGTGCATTGGATAGGGGAACAGCAGGCAGGGCTCTGGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR GCA 90 bp AGGACTCTATGGTCAAGACTCCTTCCTTACCACAGACAAGAGGAAAGATCTGCCCTGCACTTTGATGCCTaGTTCGAAGGACGTCTCGTC +
Preference number: 4 (lower is better)
Translates to: RTLWSRLLPYHRQEERSALHFDA*FEGRLV
Trigger: GACGAGACGTCCTTCGAAGCAGGCATCAAAGTGCAG...GGCAGATCTTTCCTCTTGTCTGTGGTAAGGAAGGAGTCTTGACCATAGAGTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000453327.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR GCA 90 bp AAAGGTTACAATGCGCGTGTCGTCTCCTTGTGCTTCTCAGAGGGATGTGTGTACGCACACTCCTTGTACTaGTCTGGAGTACAGTATGGG +
Preference number: 4 (lower is better)
Translates to: KGYNARVVSLCFSEGCVYAHSLY*SGVQYG
Trigger: CCCATACTGTACTCCAGAGCAGTACAAGGAGTGTGC...GTACACACATCCCTCTGAGAAGCACAAGGAGACGACACGCGCATTGTAACCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR GCA 90 bp AAGAATGGGATAGAGGCAGAGAGAGGACTCTATGGTCAAGACTCCTTCCTTACCCGTGTCGTCTCCTTGTaGTTCTCAGAGGGATGTGTG +
Preference number: 4 (lower is better)
Translates to: KNGIEAERGLYGQDSFLTRVVSL*FSEGCV
Trigger: CACACATCCCTCTGAGAAGCACAAGGAGACGACACG...GGTAAGGAAGGAGTCTTGACCATAGAGTCCTCTCTCTGCCTCTATCCCATTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR GCA 90 bp AGGACTCTATGGTCAAGACTCCTTCCTTACCACAGACAAGAGGAAAGATCTGCCCGTGTCGTCTCCTTGTaGTTCTCAGAGGGATGTGTG +
Preference number: 4 (lower is better)
Translates to: RTLWSRLLPYHRQEERSARVVSL*FSEGCV
Trigger: CACACATCCCTCTGAGAAGCACAAGGAGACGACACG...GGCAGATCTTTCCTCTTGTCTGTGGTAAGGAAGGAGTCTTGACCATAGAGTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR GCA 90 bp AAGGTTACAATGCGCGTGTCGTCTCCTTGTGCTTCTCAGAGGGATGTGTGTACAGTGCAAAGGTTACAATaGGCGTGTCGTCTCCTTGTG +
Preference number: 4 (lower is better)
Translates to: KVTMRVSSPCASQRDVCTVQRLQ*ACRLLV
Trigger: CACAAGGAGACGACACGCGCATTGTAACCTTTGCAC...TGTACACACATCCCTCTGAGAAGCACAAGGAGACGACACGCGCATTGTAACCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
ENST00000552633.2
CDS-3UTR GCA 90 bp TTTTCCTCGTCGGCACAGCTTGTGCTTAATGACCTCGTAGGCGTAGTCAAAGAGTTTTGGCCTCATTCCTaGTTCCCTCTGGGGAGGTAT +
Preference number: 4 (lower is better)
Translates to: FSSSAQLVLNDLVGVVKEFWPHS*FPLGRY
Trigger: ATACCTCCCCAGAGGGAAGCAGGAATGAGGCCAAAA...CTCTTTGACTACGCCTACGAGGTCATTAAGCACAAGCTGTGCCGACGAGGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000550558.5
CDS-3UTR GCA 90 bp TATGGTCAAGACTCCTTCCTTACCACAGACAAGAGGAAAGATCTGCCCCGGAGTTTCTTGCCCTCTGTGTaGCCTGGAAAACTGTTCCTG +
Preference number: 4 (lower is better)
Translates to: YGQDSFLTTDKRKDLPRSFLPSV*PGKLFL
Trigger: CAGGAACAGTTTTCCAGGGCACACAGAGGGCAAGAA...ACTCCGGGGCAGATCTTTCCTCTTGTCTGTGGTAAGGAAGGAGTCTTGACCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453327.7
ENST00000550558.5
CDS-3UTR GCA 90 bp ACTCTATGGTCAAGACTCCTTCCTTACCACAGACAAGAGGAAAGATCTGCCCCGTTCTTGCCCTCTGTGTaGCCTGGAAAACTGTTCCTG +
Preference number: 4 (lower is better)
Translates to: TLWSRLLPYHRQEERSAPFLPSV*PGKLFL
Trigger: CAGGAACAGTTTTCCAGGGCACACAGAGGGCAAGAA...CGGGGCAGATCTTTCCTCTTGTCTGTGGTAAGGAAGGAGTCTTGACCATAGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453327.7
ENST00000550558.5
CDS-3UTR CCA 90 bp TGTGCTTCTCAGAGGGATGTGTGTACACAGTACAGACACCAGGGGAGAGAGTCCTCATTCTTGGAGACTTaGCTAAAGCGGAACTCGTTG +
Preference number: 4 (lower is better)
Translates to: CASQRDVCTQYRHQGRESSFLET*LKRNSL
Trigger: CAACGAGTTCCGCTTTAGCCAAGTCTCCAAGAATGA...GGACTCTCTCCCCTGGTGTCTGTACTGTGTACACACATCCCTCTGAGAAGCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR CCA 90 bp TCAAAGAAAATGTCCAGCACCAGGATGTTCTCCCCTATGTATTGCTCAGATTTGGTATGGGGCATCCCCTaGCATGTGCACCATGCGGCA +
Preference number: 4 (lower is better)
Translates to: SKKMSSTRMFSPMYCSDLVWGIP*HVHHAA
Trigger: TGCCGCATGGTGCACATGCCAGGGGATGCCCCATAC...CAAATCTGAGCAATACATAGGGGAGAACATCCTGGTGCTGGACATTTTCTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000550558.5
CDS-3UTR CCA 90 bp AAAGGTTACAATGCGCGTGTCGTCTCCTTGTGCTTCTCAGAGGGATGTGTGTACCTCCTTGTACTGCTCTaGAGTACAGTATGGGGCATC +
Preference number: 4 (lower is better)
Translates to: KGYNARVVSLCFSEGCVYLLVLL*STVWGI
Trigger: GATGCCCCATACTGTACTCCAGAGCAGTACAAGGAG...GTACACACATCCCTCTGAGAAGCACAAGGAGACGACACGCGCATTGTAACCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CCA 90 bp ACAGTACAGACACCAGGGGAGAGAGTCCAACTCTTTATACAGGCGAAGGCATTCCTCCTTGTACTGCTCTaGAGTACAGTATGGGGCATC +
Preference number: 4 (lower is better)
Translates to: TVQTPGERVQLFIQAKAFLLVLL*STVWGI
Trigger: GATGCCCCATACTGTACTCCAGAGCAGTACAAGGAG...GAATGCCTTCGCCTGTATAAAGAGTTGGACTCTCTCCCCTGGTGTCTGTACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CCA 90 bp ACTCTATGGTCAAGACTCCTTCCTTACCACAGACAAGAGGAAAGATCTGCCCCGCTCCTTGTACTGCTCTaGAGTACAGTATGGGGCATC +
Preference number: 4 (lower is better)
Translates to: TLWSRLLPYHRQEERSAPLLVLL*STVWGI
Trigger: GATGCCCCATACTGTACTCCAGAGCAGTACAAGGAG...CGGGGCAGATCTTTCCTCTTGTCTGTGGTAAGGAAGGAGTCTTGACCATAGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000453327.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CCA 90 bp TCTATGGTCAAGACTCCTTCCTTACCACAGACAAGAGGAAAGATCTGCCCCGGACTCCTTGTACTGCTCTaGAGTACAGTATGGGGCATC +
Preference number: 4 (lower is better)
Translates to: SMVKTPSLPQTRGKICPGLLVLL*STVWGI
Trigger: GATGCCCCATACTGTACTCCAGAGCAGTACAAGGAG...TCCGGGGCAGATCTTTCCTCTTGTCTGTGGTAAGGAAGGAGTCTTGACCATAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000453327.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CCA 90 bp GAGGACTCTATGGTCAAGACTCCTTCCTTACCACAGACAAGAGGAAAGATCTGCCCGCACTGCTCCTTTTaGCCTCCTTCTGGCATTTTC +
Preference number: 4 (lower is better)
Translates to: EDSMVKTPSLPQTRGKICPHCSF*PPSGIF
Trigger: GAAAATGCCAGAAGGAGGCCAAAAGGAGCAGTGCGG...GCAGATCTTTCCTCTTGTCTGTGGTAAGGAAGGAGTCTTGACCATAGAGTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000453327.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CCA 90 bp CTATGGTCAAGACTCCTTCCTTACCACAGACAAGAGGAAAGATCTGCCCCGGAGGCAGCAGAATGTAGATaGACACTCAGATGGCAGACA +
Preference number: 4 (lower is better)
Translates to: LWSRLLPYHRQEERSAPEAAECR*TLRWQT
Trigger: TGTCTGCCATCTGAGTGTCCATCTACATTCTGCTGC...CTCCGGGGCAGATCTTTCCTCTTGTCTGTGGTAAGGAAGGAGTCTTGACCATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CCA 90 bp ACAGCTTCCTTTGTCGCCACTGAGACAGTGCAAAGGTTACAATGCGCGTGTCGTGCAGCAGAATGTAGATaGACACTCAGATGGCAGACA +
Preference number: 4 (lower is better)
Translates to: TASFVATETVQRLQCACRAAECR*TLRWQT
Trigger: TGTCTGCCATCTGAGTGTCCATCTACATTCTGCTGC...ACGACACGCGCATTGTAACCTTTGCACTGTCTCAGTGGCGACAAAGGAAGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CCA 90 bp CTTCTCAGAGGGATGTGTGTACACAGTACAGACACCAGGGGAGAGAGTCCAACTATAGAAGGTGGAACTTaGGGTGGGAGAATGGTTCTC +
Preference number: 4 (lower is better)
Translates to: LLRGMCVHSTDTRGESPTIEGGT*GGRMVL
Trigger: GAGAACCATTCTCCCACCCCAAGTTCCACCTTCTAT...AGTTGGACTCTCTCCCCTGGTGTCTGTACTGTGTACACACATCCCTCTGAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CCA 90 bp CTTCTCAGAGGGATGTGTGTACACAGTACAGACACCAGGGGAGAGAGTCCAACTCCAATGCACACTTTTTaGCCTCATTCCTGCTTCCCT +
Preference number: 4 (lower is better)
Translates to: LLRGMCVHSTDTRGESPTPMHTF*PHSCFP
Trigger: AGGGAAGCAGGAATGAGGCCAAAAAGTGTGCATTGG...AGTTGGACTCTCTCCCCTGGTGTCTGTACTGTGTACACACATCCCTCTGAGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
3UTR CAA 72 bp AGACAGTGCAAAGGTTACAATGCGCGTGTCGTCTCCTaGTGCTTCTCAGAGGGATGTGTGTACACAGTACAG +
Preference number: 4 (lower is better)
Translates to: RQCKGYNARVVS*CFSEGCVYTVQ
Trigger: CTGTACTGTGTACACACATCCCTCTGAGAAGCACAAGGAGACGACACGCGCATTGTAACCTTTGCACTGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
ENST00000552633.2
3UTR CAA 72 bp CCAGAAAGAGGCAGAGCTTGTGATTCACAGCTTCCTTaGTCGCCACTGAGACAGTGCAAAGGTTACAATGCG +
Preference number: 4 (lower is better)
Translates to: PERGRACDSQLP*SPLRQCKGYNA
Trigger: CGCATTGTAACCTTTGCACTGTCTCAGTGGCGACAAAGGAAGCTGTGAATCACAAGCTCTGCCTCTTTCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR TCA 90 bp GAGGACTCTATGGTCAAGACTCCTTCCTTACCACAGACAAGAGGAAAGATCTGCTATGGATCTGCACTTTaGTGCCTGCTTCGAAGGACG +
Preference number: 4 (lower is better)
Translates to: EDSMVKTPSLPQTRGKICYGSAL*CLLRRT
Trigger: CGTCCTTCGAAGCAGGCATCAAAGTGCAGATCCATA...GCAGATCTTTCCTCTTGTCTGTGGTAAGGAAGGAGTCTTGACCATAGAGTCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000453327.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR TCA 90 bp CTATGGTCAAGACTCCTTCCTTACCACAGACAAGAGGAAAGATCTGCCCCGGAGAAAGGAGGTTCATCCTaGCTATGGATCTGCACTTTG +
Preference number: 4 (lower is better)
Translates to: LWSRLLPYHRQEERSAPEKGGSS*LWICTL
Trigger: CAAAGTGCAGATCCATAGTCAGGATGAACCTCCTTT...CTCCGGGGCAGATCTTTCCTCTTGTCTGTGGTAAGGAAGGAGTCTTGACCATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000453327.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR TCA 90 bp AAAGGTTACAATGCGCGTGTCGTCTCCTTGTGCTTCTCAGAGGGATGTGTGTACAAGAGGCAGAGCTTGTaGTTCACAGCTTCCTTTGTC +
Preference number: 4 (lower is better)
Translates to: KGYNARVVSLCFSEGCVYKRQSL*FTASFV
Trigger: GACAAAGGAAGCTGTGAATCACAAGCTCTGCCTCTT...GTACACACATCCCTCTGAGAAGCACAAGGAGACGACACGCGCATTGTAACCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR TCA 90 bp AGGACTCTATGGTCAAGACTCCTTCCTTACCACAGACAAGAGGAAAGATCTGCCCCCTCTGGGGAGGTATaGTCTCTGAGGAAACTCTTA +
Preference number: 4 (lower is better)
Translates to: RTLWSRLLPYHRQEERSAPSGEV*SLRKLL
Trigger: TAAGAGTTTCCTCAGAGATCATACCTCCCCAGAGGG...GGCAGATCTTTCCTCTTGTCTGTGGTAAGGAAGGAGTCTTGACCATAGAGTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR GCA 90 bp CAGTGCAAAGGTTACAATGCGCGTGTCGTCTCCTTGTGCTTCTCAGAGGGATGTCAGCTGCTTTTCATCTaGCATCTGTGTGTCTGGTAT +
Preference number: 4 (lower is better)
Translates to: QCKGYNARVVSLCFSEGCQLLFI*HLCVWY
Trigger: ATACCAGACACACAGATGGCAGATGAAAAGCAGCTG...ACATCCCTCTGAGAAGCACAAGGAGACGACACGCGCATTGTAACCTTTGCACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR GCA 90 bp ACTTATAGGTATCAGGATGTAGCCTACAGCACCAGGGCCGCATCTTGTCCCCATTGCAGTATCTCCAGCTaGTTTTCATCTGCCATCTGT +
Preference number: 4 (lower is better)
Translates to: TYRYQDVAYSTRAASCPHCSISS*FSSAIC
Trigger: ACAGATGGCAGATGAAAAGCAGCTGGAGATACTGCA...ATGGGGACAAGATGCGGCCCTGGTGCTGTAGGCTACATCCTGATACCTATAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR GCA 90 bp ACAGCTTCCTTTGTCGCCACTGAGACAGTGCAAAGGTTACAATGCGCGTGTCGTAAGTTGGCTTTGTCCTaGAGTATCTCCAGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: TASFVATETVQRLQCACRKLALS*SISSCF
Trigger: AAAGCAGCTGGAGATACTGCAGGACAAAGCCAACTT...ACGACACGCGCATTGTAACCTTTGCACTGTCTCAGTGGCGACAAAGGAAGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR GCA 90 bp AAGTTGGGGAAGAGGATGTGGGAGAGTTCCATAAGAAAATTTATGGACGTGGCCCTGCACTTTGATGCCTaGTTCGAAGGACGTCTCGTC +
Preference number: 4 (lower is better)
Translates to: KLGKRMWESSIRKFMDVALHFDA*FEGRLV
Trigger: GACGAGACGTCCTTCGAAGCAGGCATCAAAGTGCAG...GGCCACGTCCATAAATTTTCTTATGGAACTCTCCCACATCCTCTTCCCCAACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR GCA 90 bp AAGAATGGGATAGAGGCAGAGAGAGGACTCTATGGTCAAGACTCCTTCCTTACCTCGCCACTGAGACAGTaGAAAGGTTACAATGCGCGT +
Preference number: 4 (lower is better)
Translates to: KNGIEAERGLYGQDSFLTSPLRQ*KGYNAR
Trigger: ACGCGCATTGTAACCTTTGCACTGTCTCAGTGGCGA...GGTAAGGAAGGAGTCTTGACCATAGAGTCCTCTCTCTGCCTCTATCCCATTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR GCA 90 bp ATGATCTCTGAGGAAACTCTTAGGAACCAAGAGATTCCAAAGATCCTACAGCCTCTGTCAGCATCCCACTaGCCCAACTTCAGGAGTCGC +
Preference number: 4 (lower is better)
Translates to: MISEETLRNQEIPKILQPLSASH*PNFRSR
Trigger: GCGACTCCTGAAGTTGGGGCAGTGGGATGCTGACAG...AGGCTGTAGGATCTTTGGAATCTCTTGGTTCCTAAGAGTTTCCTCAGAGATCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR GCA 90 bp GAGGACTCTATGGTCAAGACTCCTTCCTTACCACAGACAAGAGGAAAGATCTGCTTTCTCACCCTTTCTTaGCCTCTGTGTGCCCTGGAA +
Preference number: 4 (lower is better)
Translates to: EDSMVKTPSLPQTRGKICFLTLS*PLCALE
Trigger: TTCCAGGGCACACAGAGGGCAAGAAAGGGTGAGAAA...GCAGATCTTTCCTCTTGTCTGTGGTAAGGAAGGAGTCTTGACCATAGAGTCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453327.7
CDS-3UTR CCA 90 bp GATTCCAAAGATCCTACAGCCTTACTCTCCAGCTCCAGGCCAATGCAGCTGCTCTGCCATCTGTGTGTCTaGTATCTCATACCTGTTGTT +
Preference number: 4 (lower is better)
Translates to: DSKDPTALLSSSRPMQLLCHLCV*YLIPVV
Trigger: AACAACAGGTATGAGATACCAGACACACAGATGGCA...GAGCAGCTGCATTGGCCTGGAGCTGGAGAGTAAGGCTGTAGGATCTTTGGAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR CCA 90 bp TCCTTTGTCGCCACTGAGACAGTGCAAAGGTTACAATGCGCGTGTCGTCTCCTTAGAGAGAGGACTCTATaGTCAAGACTCCTTCCTTAC +
Preference number: 4 (lower is better)
Translates to: SFVATETVQRLQCACRLLRERTL*SRLLPY
Trigger: GTAAGGAAGGAGTCTTGACCATAGAGTCCTCTCTCT...AAGGAGACGACACGCGCATTGTAACCTTTGCACTGTCTCAGTGGCGACAAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CCA 90 bp GACAGTGCAAAGGTTACAATGCGCGTGTCGTCTCCTTGTGCTTCTCAGAGGGATAGAGAGAGGACTCTATaGTCAAGACTCCTTCCTTAC +
Preference number: 4 (lower is better)
Translates to: DSAKVTMRVSSPCASQRDRERTL*SRLLPY
Trigger: GTAAGGAAGGAGTCTTGACCATAGAGTCCTCTCTCT...ATCCCTCTGAGAAGCACAAGGAGACGACACGCGCATTGTAACCTTTGCACTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CCA 90 bp GCCTTTGGTGACTGGTGGCAGCAGAATGTAGATGGACACTCAGATGGCAGACAGTTAAGGTACATTCTCTaGTTTGGGGCCAAATTCCAG +
Preference number: 4 (lower is better)
Translates to: AFGDWWQQNVDGHSDGRQLRYIL*FGAKFQ
Trigger: CTGGAATTTGGCCCCAAACCAGAGAATGTACCTTAA...CTGTCTGCCATCTGAGTGTCCATCTACATTCTGCTGCCACCAGTCACCAAAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CCA 90 bp GCGCGTGTCGTCTCCTTGTGCTTCTCAGAGGGATGTGTGTACACAGTACAGACATTGGGGAAGAGGATGTaGGAGAGTTCCATAAGAAAA +
Preference number: 4 (lower is better)
Translates to: ARVVSLCFSEGCVYTVQTLGKRM*ESSIRK
Trigger: TTTTCTTATGGAACTCTCCCACATCCTCTTCCCCAA...TGTCTGTACTGTGTACACACATCCCTCTGAGAAGCACAAGGAGACGACACGCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CCA 90 bp AAGAATGGGATAGAGGCAGAGAGAGGACTCTATGGTCAAGACTCCTTCCTTACCAGGTGGAACTTGGGGTaGGAGAATGGTTCTCAGAGA +
Preference number: 4 (lower is better)
Translates to: KNGIEAERGLYGQDSFLTRWNLG*ENGSQR
Trigger: TCTCTGAGAACCATTCTCCCACCCCAAGTTCCACCT...GGTAAGGAAGGAGTCTTGACCATAGAGTCCTCTCTCTGCCTCTATCCCATTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CCA 90 bp TTTTCCTCGTCGGCACAGCTTGTGCTTAATGACCTCGTAGGCGTAGTCAAAGAGATAGAAGGTGGAACTTaGGGTGGGAGAATGGTTCTC +
Preference number: 4 (lower is better)
Translates to: FSSSAQLVLNDLVGVVKEIEGGT*GGRMVL
Trigger: GAGAACCATTCTCCCACCCCAAGTTCCACCTTCTAT...CTCTTTGACTACGCCTACGAGGTCATTAAGCACAAGCTGTGCCGACGAGGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550558.5
CDS-3UTR CCA 90 bp TATGGTCAAGACTCCTTCCTTACCACAGACAAGAGGAAAGATCTGCCCCGGAGTATGGAGCAGAAGATCTaGATGGGCATTTTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: YGQDSFLTTDKRKDLPRSMEQKI*MGIFSR
Trigger: CCTGGAGAAAATGCCCATCCAGATCTTCTGCTCCAT...ACTCCGGGGCAGATCTTTCCTCTTGTCTGTGGTAAGGAAGGAGTCTTGACCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552438.5
CDS-3UTR TCA 90 bp ATGAAGTTGGGGAAGAGGATGTGGGAGAGTTCCATAAGAAAATTTATGGACGTGAGGAGGAAAGGCCACTaGCTGAGGACCTCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: MKLGKRMWESSIRKFMDVRRKGH*LRTSAS
Trigger: AGAAGCTGAGGTCCTCAGTCAGTGGCCTTTCCTCCT...CACGTCCATAAATTTTCTTATGGAACTCTCCCACATCCTCTTCCCCAACTTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR GCA 90 bp ACTCTATGGTCAAGACTCCTTCCTTACCACAGACAAGAGGAAAGATCTGCCCCGCAGCTGCTTTTCATCTaGCATCTGTGTGTCTGGTAT +
Preference number: 4 (lower is better)
Translates to: TLWSRLLPYHRQEERSAPQLLFI*HLCVWY
Trigger: ATACCAGACACACAGATGGCAGATGAAAAGCAGCTG...CGGGGCAGATCTTTCCTCTTGTCTGTGGTAAGGAAGGAGTCTTGACCATAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR GCA 90 bp AAGTTGGGGAAGAGGATGTGGGAGAGTTCCATAAGAAAATTTATGGACGTGGCCGTGCAAAGGTTACAATaGGCGTGTCGTCTCCTTGTG +
Preference number: 4 (lower is better)
Translates to: KLGKRMWESSIRKFMDVAVQRLQ*ACRLLV
Trigger: CACAAGGAGACGACACGCGCATTGTAACCTTTGCAC...GGCCACGTCCATAAATTTTCTTATGGAACTCTCCCACATCCTCTTCCCCAACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CCA 90 bp TCTATGGTCAAGACTCCTTCCTTACCACAGACAAGAGGAAAGATCTGCCCCGGAAGAGAGAGGACTCTATaGTCAAGACTCCTTCCTTAC +
Preference number: 4 (lower is better)
Translates to: SMVKTPSLPQTRGKICPGRERTL*SRLLPY
Trigger: GTAAGGAAGGAGTCTTGACCATAGAGTCCTCTCTCT...TCCGGGGCAGATCTTTCCTCTTGTCTGTGGTAAGGAAGGAGTCTTGACCATAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000453327.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CCA 90 bp AGGACTCTATGGTCAAGACTCCTTCCTTACCACAGACAAGAGGAAAGATCTGCCGCAGCAGAATGTAGATaGACACTCAGATGGCAGACA +
Preference number: 4 (lower is better)
Translates to: RTLWSRLLPYHRQEERSAAAECR*TLRWQT
Trigger: TGTCTGCCATCTGAGTGTCCATCTACATTCTGCTGC...GGCAGATCTTTCCTCTTGTCTGTGGTAAGGAAGGAGTCTTGACCATAGAGTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CCA 90 bp GACAGTGCAAAGGTTACAATGCGCGTGTCGTCTCCTTGTGCTTCTCAGAGGGATTTAAGGTACATTCTCTaGTTTGGGGCCAAATTCCAG +
Preference number: 4 (lower is better)
Translates to: DSAKVTMRVSSPCASQRDLRYIL*FGAKFQ
Trigger: CTGGAATTTGGCCCCAAACCAGAGAATGTACCTTAA...ATCCCTCTGAGAAGCACAAGGAGACGACACGCGCATTGTAACCTTTGCACTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CCA 90 bp CAGTGCAAAGGTTACAATGCGCGTGTCGTCTCCTTGTGCTTCTCAGAGGGATGTTTGGGGAAGAGGATGTaGGAGAGTTCCATAAGAAAA +
Preference number: 4 (lower is better)
Translates to: QCKGYNARVVSLCFSEGCLGKRM*ESSIRK
Trigger: TTTTCTTATGGAACTCTCCCACATCCTCTTCCCCAA...ACATCCCTCTGAGAAGCACAAGGAGACGACACGCGCATTGTAACCTTTGCACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR TCA 90 bp GAAGCAAATGAAGTTGGGGAAGAGGATGTGGGAGAGTTCCATAAGAAAATTTATTCTCATACCTGTTGTTaGGCAGGGCCAGCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: EANEVGEEDVGEFHKKIYSHTCC*AGPAAP
Trigger: GGGAGCTGCTGGCCCTGCTCAACAACAGGTATGAGA...ATAAATTTTCTTATGGAACTCTCCCACATCCTCTTCCCCAACTTCATTTGCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR TCA 90 bp ATGATCTCTGAGGAAACTCTTAGGAACCAAGAGATTCCAAAGATCCTACAGCCTAGATTCCACATGGTGTaGGAGAGTGGGGCTGAGGTT +
Preference number: 4 (lower is better)
Translates to: MISEETLRNQEIPKILQPRFHMV*ESGAEV
Trigger: AACCTCAGCCCCACTCTCTCACACCATGTGGAATCT...AGGCTGTAGGATCTTTGGAATCTCTTGGTTCCTAAGAGTTTCCTCAGAGATCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR GCA 90 bp ATGAAGTTGGGGAAGAGGATGTGGGAGAGTTCCATAAGAAAATTTATGGACGTGCTGCACTTTGATGCCTaGTTCGAAGGACGTCTCGTC +
Preference number: 4 (lower is better)
Translates to: MKLGKRMWESSIRKFMDVLHFDA*FEGRLV
Trigger: GACGAGACGTCCTTCGAAGCAGGCATCAAAGTGCAG...CACGTCCATAAATTTTCTTATGGAACTCTCCCACATCCTCTTCCCCAACTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CCA 90 bp AAGAATGGGATAGAGGCAGAGAGAGGACTCTATGGTCAAGACTCCTTCCTTACCTCATTCTTGGAGACTTaGCTAAAGCGGAACTCGTTG +
Preference number: 4 (lower is better)
Translates to: KNGIEAERGLYGQDSFLTSFLET*LKRNSL
Trigger: CAACGAGTTCCGCTTTAGCCAAGTCTCCAAGAATGA...GGTAAGGAAGGAGTCTTGACCATAGAGTCCTCTCTCTGCCTCTATCCCATTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR CCA 90 bp AAGGTTACAATGCGCGTGTCGTCTCCTTGTGCTTCTCAGAGGGATGTGTGTACATGCCATCTGTGTGTCTaGTATCTCATACCTGTTGTT +
Preference number: 4 (lower is better)
Translates to: KVTMRVSSPCASQRDVCTCHLCV*YLIPVV
Trigger: AACAACAGGTATGAGATACCAGACACACAGATGGCA...TGTACACACATCCCTCTGAGAAGCACAAGGAGACGACACGCGCATTGTAACCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR CCA 90 bp ACTCTATGGTCAAGACTCCTTCCTTACCACAGACAAGAGGAAAGATCTGCCCCGTGCCATCTGTGTGTCTaGTATCTCATACCTGTTGTT +
Preference number: 4 (lower is better)
Translates to: TLWSRLLPYHRQEERSAPCHLCV*YLIPVV
Trigger: AACAACAGGTATGAGATACCAGACACACAGATGGCA...CGGGGCAGATCTTTCCTCTTGTCTGTGGTAAGGAAGGAGTCTTGACCATAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR CCA 90 bp TATGGTCAAGACTCCTTCCTTACCACAGACAAGAGGAAAGATCTGCCCCGGAGTTTGGGGAAGAGGATGTaGGAGAGTTCCATAAGAAAA +
Preference number: 4 (lower is better)
Translates to: YGQDSFLTTDKRKDLPRSLGKRM*ESSIRK
Trigger: TTTTCTTATGGAACTCTCCCACATCCTCTTCCCCAA...ACTCCGGGGCAGATCTTTCCTCTTGTCTGTGGTAAGGAAGGAGTCTTGACCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CCA 90 bp ATGAAGTTGGGGAAGAGGATGTGGGAGAGTTCCATAAGAAAATTTATGGACGTGCTTGGGGTGGGAGAATaGTTCTCAGAGACAAGAGGG +
Preference number: 4 (lower is better)
Translates to: MKLGKRMWESSIRKFMDVLGVGE*FSETRG
Trigger: CCCTCTTGTCTCTGAGAACCATTCTCCCACCCCAAG...CACGTCCATAAATTTTCTTATGGAACTCTCCCACATCCTCTTCCCCAACTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CCA 90 bp ATGAAGTTGGGGAAGAGGATGTGGGAGAGTTCCATAAGAAAATTTATGGACGTGCCCTCCACAAAAATGTaGTTGGTGCCATGGAGGGTG +
Preference number: 4 (lower is better)
Translates to: MKLGKRMWESSIRKFMDVPSTKM*LVPWRV
Trigger: CACCCTCCATGGCACCAACCACATTTTTGTGGAGGG...CACGTCCATAAATTTTCTTATGGAACTCTCCCACATCCTCTTCCCCAACTTCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000552438.5
CDS-3UTR GCA 90 bp ATGAAGTTGGGGAAGAGGATGTGGGAGAGTTCCATAAGAAAATTTATGGACGTGGCACACTCCTTGTACTaGTCTGGAGTACAGTATGGG +
Preference number: 4 (lower is better)
Translates to: MKLGKRMWESSIRKFMDVAHSLY*SGVQYG
Trigger: CCCATACTGTACTCCAGAGCAGTACAAGGAGTGTGC...CACGTCCATAAATTTTCTTATGGAACTCTCCCACATCCTCTTCCCCAACTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR TCA 90 bp GAAGCAAATGAAGTTGGGGAAGAGGATGTGGGAGAGTTCCATAAGAAAATTTATGCTGTGGGGTGGGGGTaGACTTATAGGTATCAGGAT +
Preference number: 4 (lower is better)
Translates to: EANEVGEEDVGEFHKKIYAVGWG*TYRYQD
Trigger: ATCCTGATACCTATAAGTTCACCCCCACCCCACAGC...ATAAATTTTCTTATGGAACTCTCCCACATCCTCTTCCCCAACTTCATTTGCTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CCA 90 bp ATGATCTCTGAGGAAACTCTTAGGAACCAAGAGATTCCAAAGATCCTACAGCCTGCAGCAGAATGTAGATaGACACTCAGATGGCAGACA +
Preference number: 4 (lower is better)
Translates to: MISEETLRNQEIPKILQPAAECR*TLRWQT
Trigger: TGTCTGCCATCTGAGTGTCCATCTACATTCTGCTGC...AGGCTGTAGGATCTTTGGAATCTCTTGGTTCCTAAGAGTTTCCTCAGAGATCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR GCA 90 bp TCAAAGAAAATGTCCAGCACCAGGATGTTCTCCCCTATGTATTGCTCAGATTTGCAGCTGCTTTTCATCTaGCATCTGTGTGTCTGGTAT +
Preference number: 4 (lower is better)
Translates to: SKKMSSTRMFSPMYCSDLQLLFI*HLCVWY
Trigger: ATACCAGACACACAGATGGCAGATGAAAAGCAGCTG...CAAATCTGAGCAATACATAGGGGAGAACATCCTGGTGCTGGACATTTTCTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000550558.5
CDS-3UTR CCA 90 bp GAAGCAAATGAAGTTGGGGAAGAGGATGTGGGAGAGTTCCATAAGAAAATTTATGCCTTTGGTGACTGGTaGCAGCAGAATGTAGATGGA +
Preference number: 4 (lower is better)
Translates to: EANEVGEEDVGEFHKKIYAFGDW*QQNVDG
Trigger: TCCATCTACATTCTGCTGCCACCAGTCACCAAAGGC...ATAAATTTTCTTATGGAACTCTCCCACATCCTCTTCCCCAACTTCATTTGCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CCA 90 bp ATGATCTCTGAGGAAACTCTTAGGAACCAAGAGATTCCAAAGATCCTACAGCCTTTAAGGTACATTCTCTaGTTTGGGGCCAAATTCCAG +
Preference number: 4 (lower is better)
Translates to: MISEETLRNQEIPKILQPLRYIL*FGAKFQ
Trigger: CTGGAATTTGGCCCCAAACCAGAGAATGTACCTTAA...AGGCTGTAGGATCTTTGGAATCTCTTGGTTCCTAAGAGTTTCCTCAGAGATCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS GCA 90 bp CGCCCGCGCGCGCTGGCTCGCTGGCTCGCTCGCCTCGGCTCGGTCTaGCCGGGCTCGGCGCGGTGCGCGGTGCTCTCAGCCCTGGGATCT +
Preference number: 5 (lower is better)
Translates to: RPRALARWLARLGSV*PGSARCAVLSALGS
Trigger: AGATCCCAGGGCTGAGAGCACCGCGCACCGCGCCGAGCCCGGGCAGACCGAGCCGAGGCGAGCGAGCCAGCGAGCCAGCGCGCGCGGGCG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228468.8
ENST00000447966.7
CDS GCA 90 bp CTGCCCGGGCTCGGCGCGGTGCGCGGTGCTCTCAGCCCTGGGATCTaGAGGGATCCATCGTCCGGCCGGGAGGCGGCGGGAGGGGAGGGG +
Preference number: 5 (lower is better)
Translates to: LPGLGAVRGALSPGI*RDPSSGREAAGGEG
Trigger: CCCCTCCCCTCCCGCCGCCTCCCGGCCGGACGATGGATCCCTGCAGATCCCAGGGCTGAGAGCACCGCGCACCGCGCCGAGCCCGGGCAG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228468.8
ENST00000447966.7
CDS GCA 90 bp TCGCTCGCCTCGGCTCGGTCTGCCCGGGCTCGGCGCGGTGCGCGGTaGTCTCAGCCCTGGGATCTGCAGGGATCCATCGTCCGGCCGGGA +
Preference number: 5 (lower is better)
Translates to: SLASARSARARRGAR*SQPWDLQGSIVRPG
Trigger: TCCCGGCCGGACGATGGATCCCTGCAGATCCCAGGGCTGAGAGCACCGCGCACCGCGCCGAGCCCGGGCAGACCGAGCCGAGGCGAGCGA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228468.8
ENST00000447966.7
CDS-3UTR CAA 90 bp GGACGTGGCCCTCTACAAGGGCCTCCGGGAGAGGGACCAGTGAGGTTAGGCACTCCGAGGGTGCCCGGGTaGGGGGAGAGGGTGAGGCCA +
Preference number: 5 (lower is better)
Translates to: GRGPLQGPPGEGPVRLGTPRVPG*GERVRP
Trigger: TGGCCTCACCCTCTCCCCCAACCCGGGCACCCTCGG...AGTGCCTAACCTCACTGGTCCCTCTCCCGGAGGCCCTTGTAGAGGGCCACGTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS GCA 90 bp GCCGCTCGTAGGAGAAGATGTGGGCCAGGCCGTGCAGTGTGGAGCTaGTGGCGAAGGCCTGGATGCTCACCGGCTGGACGCCACCCACCT +
Preference number: 5 (lower is better)
Translates to: AARRRRCGPGRAVWS*WRRPGCSPAGRHPP
Trigger: AGGTGGGTGGCGTCCAGCCGGTGAGCATCCAGGCCTTCGCCAGCAGCTCCACACTGCACGGCCTGGCCCACATCTTCTCCTACGAGCGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS CCA 90 bp GCTCGTAGGAGAAGATGTGGGCCAGGCCGTGCAGTGTGGAGCTGCTaGCGAAGGCCTGGATGCTCACCGGCTGGACGCCACCCACCTCCT +
Preference number: 5 (lower is better)
Translates to: ARRRRCGPGRAVWSC*RRPGCSPAGRHPPP
Trigger: AGGAGGTGGGTGGCGTCCAGCCGGTGAGCATCCAGGCCTTCGCCAGCAGCTCCACACTGCACGGCCTGGCCCACATCTTCTCCTACGAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS CCA 90 bp GAGACAGCCGCTCGTAGGAGAAGATGTGGGCCAGGCCGTGCAGTGTaGAGCTGCTGGCGAAGGCCTGGATGCTCACCGGCTGGACGCCAC +
Preference number: 5 (lower is better)
Translates to: ETAARRRRCGPGRAV*SCWRRPGCSPAGRH
Trigger: GTGGCGTCCAGCCGGTGAGCATCCAGGCCTTCGCCAGCAGCTCCACACTGCACGGCCTGGCCCACATCTTCTCCTACGAGCGGCTGTCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR CAA 90 bp CCCCCTCGCTCTCCTAGTCCTCCCCATCTAGGCCTTTGGTTCAGCGGCCTGCGGCGGAACTCGTTGAGGTaGCACAGCGTGACAGCAGGG +
Preference number: 5 (lower is better)
Translates to: PPRSPSPPHLGLWFSGLRRNSLR*HSVTAG
Trigger: CCCTGCTGTCACGCTGTGCAACCTCAACGAGTTCCG...CCGCAGGCCGCTGAACCAAAGGCCTAGATGGGGAGGACTAGGAGAGCGAGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR CAA 90 bp CCCCCTCGCTCTCCTAGTCCTCCCCATCTAGGCCTTTGGTTCAGCGGCCTGCGGCCAGGAGACTTGGGTTaGGGGACAGTCACTGGGCTG +
Preference number: 5 (lower is better)
Translates to: PPRSPSPPHLGLWFSGLRPGDLG*GTVTGL
Trigger: CAGCCCAGTGACTGTCCCCAAACCCAAGTCTCCTGG...CCGCAGGCCGCTGAACCAAAGGCCTAGATGGGGAGGACTAGGAGAGCGAGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CAA 90 bp GGACGTGGCCCTCTACAAGGGCCTCCGGGAGAGGGACCAGTGAGGTTAGGCACTGCCGCAGGGTCCCCCTaGGTAGGAGCAATAGAGCAG +
Preference number: 5 (lower is better)
Translates to: GRGPLQGPPGEGPVRLGTAAGSP*VGAIEQ
Trigger: CTGCTCTATTGCTCCTACCAAGGGGGACCCTGCGGC...AGTGCCTAACCTCACTGGTCCCTCTCCCGGAGGCCCTTGTAGAGGGCCACGTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000552438.5
CDS-3UTR CAA 90 bp GGACGTGGCCCTCTACAAGGGCCTCCGGGAGAGGGACCAGTGAGGTTAGGCACTTTCTTGGCCAGGTACTaGGCTGAGGCTTTGCTGGGG +
Preference number: 5 (lower is better)
Translates to: GRGPLQGPPGEGPVRLGTFLARY*AEALLG
Trigger: CCCCAGCAAAGCCTCAGCCAAGTACCTGGCCAAGAA...AGTGCCTAACCTCACTGGTCCCTCTCCCGGAGGCCCTTGTAGAGGGCCACGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CAA 90 bp GATTCCAAAGATCCTACAGCCTTACTCTCCAGCTCCAGGCCAATGCAGCTGCTCCCGAGGGTGCCCGGGTaGGGGGAGAGGGTGAGGCCA +
Preference number: 5 (lower is better)
Translates to: DSKDPTALLSSSRPMQLLPRVPG*GERVRP
Trigger: TGGCCTCACCCTCTCCCCCAACCCGGGCACCCTCGG...GAGCAGCTGCATTGGCCTGGAGCTGGAGAGTAAGGCTGTAGGATCTTTGGAATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR CAA 90 bp CCCCCTCGCTCTCCTAGTCCTCCCCATCTAGGCCTTTGGTTCAGCGGCCTGCGGTGCATGGGCTTCACCTaGAAGTCTTCAGCGCTGCAG +
Preference number: 5 (lower is better)
Translates to: PPRSPSPPHLGLWFSGLRCMGFT*KSSALQ
Trigger: CTGCAGCGCTGAAGACTTCAAGGTGAAGCCCATGCA...CCGCAGGCCGCTGAACCAAAGGCCTAGATGGGGAGGACTAGGAGAGCGAGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000453327.7
ENST00000550558.5
CDS TCA 90 bp AAGATGGGAAGGGAGGACTGGCAGGCCCCCATGCTGCCCCAGAAGTaGCCCACTCCAGGTCCATACCTTCTAGACCCTTCCCACCCATCC +
Preference number: 5 (lower is better)
Translates to: KMGREDWQAPMLPQK*PTPGPYLLDPSHPS
Trigger: GGATGGGTGGGAAGGGTCTAGAAGGTATGGACCTGGAGTGGGTCACTTCTGGGGCAGCATGGGGGCCTGCCAGTCCTCCCTTCCCATCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548350.1
CDS-3UTR CAA 90 bp CCCCCTCGCTCTCCTAGTCCTCCCCATCTAGGCCTTTGGTTCAGCGGCCTGCGGTCCGCACTGCTCCTTTaGGCCTCCTTCTGGCATTTT +
Preference number: 5 (lower is better)
Translates to: PPRSPSPPHLGLWFSGLRSALLL*ASFWHF
Trigger: AAAATGCCAGAAGGAGGCCAAAAGGAGCAGTGCGGA...CCGCAGGCCGCTGAACCAAAGGCCTAGATGGGGAGGACTAGGAGAGCGAGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000453327.7
ENST00000550558.5
ENST00000552438.5
ENST00000552633.2
CDS CCA 90 bp TGGCCCCCGATGTCACCAAGACAACAGGGTTTGGGGAAGGGCCTCTaGGGTGGAGGACCCTCATGGGACAGAAGTGAGCACCCTGCTTTT +
Preference number: 5 (lower is better)
Translates to: WPPMSPRQQGLGKGL*GGGPSWDRSEHPAF
Trigger: AAAAGCAGGGTGCTCACTTCTGTCCCATGAGGGTCCTCCACCCCAGAGGCCCTTCCCCAAACCCTGTTGTCTTGGTGACATCGGGGGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000228468.8
CDS CCA 90 bp GGGTCTGGTGATGGTGGTAGTACCAAAGGCCTAGAAGGTGTAAGCTaGGAGAAGATGGGAAGGGAGGACTGGCAGGCCCCCATGCTGCCC +
Preference number: 5 (lower is better)
Translates to: GSGDGGSTKGLEGVS*EKMGREDWQAPMLP
Trigger: GGGCAGCATGGGGGCCTGCCAGTCCTCCCTTCCCATCTTCTCCCAGCTTACACCTTCTAGGCCTTTGGTACTACCACCATCACCAGACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548350.1
CDS-3UTR CAA 90 bp CCCCCTCGCTCTCCTAGTCCTCCCCATCTAGGCCTTTGGTTCAGCGGCCTGCGGTTGAAGGGTTTGGGTTaGAAGCTGCGGAAGTTGGCT +
Preference number: 5 (lower is better)
Translates to: PPRSPSPPHLGLWFSGLRLKGLG*KLRKLA
Trigger: AGCCAACTTCCGCAGCTTCAAACCCAAACCCTTCAA...CCGCAGGCCGCTGAACCAAAGGCCTAGATGGGGAGGACTAGGAGAGCGAGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR CAA 90 bp ACTCTATGGTCAAGACTCCTTCCTTACCACAGACAAGAGGAAAGATCTGCCCCGCCGAGGGTGCCCGGGTaGGGGGAGAGGGTGAGGCCA +
Preference number: 5 (lower is better)
Translates to: TLWSRLLPYHRQEERSAPPRVPG*GERVRP
Trigger: TGGCCTCACCCTCTCCCCCAACCCGGGCACCCTCGG...CGGGGCAGATCTTTCCTCTTGTCTGTGGTAAGGAAGGAGTCTTGACCATAGAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CAA 90 bp TCTATGGTCAAGACTCCTTCCTTACCACAGACAAGAGGAAAGATCTGCCCCGGACCGAGGGTGCCCGGGTaGGGGGAGAGGGTGAGGCCA +
Preference number: 5 (lower is better)
Translates to: SMVKTPSLPQTRGKICPGPRVPG*GERVRP
Trigger: TGGCCTCACCCTCTCCCCCAACCCGGGCACCCTCGG...TCCGGGGCAGATCTTTCCTCTTGTCTGTGGTAAGGAAGGAGTCTTGACCATAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS TCA 90 bp GCTCCGTGGTGGCCACTTCGTTTAGAAGGGTCACGTGTGGGTAGCTaGGGTAATAAGCAACGCGGTCCCCTACCTGGCACAGGAAGGCAC +
Preference number: 5 (lower is better)
Translates to: APWWPLRLEGSRVGS*GNKQRGPLPGTGRH
Trigger: GTGCCTTCCTGTGCCAGGTAGGGGACCGCGTTGCTTATTACCTCAGCTACCCACACGTGACCCTTCTAAACGAAGTGGCCACCACGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552438.5
CDS-3UTR CAA 90 bp CATCCCACTGCCCCAACTTCAGGAGTCGCCAATCCCCAGCTCCCTTCTGTCTCTCACGGGTTGTGTCTTTaGACGTCGTCCAGGCTGAGG +
Preference number: 5 (lower is better)
Translates to: HPTAPTSGVANPQLPSVSHGLCL*TSSRLR
Trigger: CCTCAGCCTGGACGACGTCAAAAGACACAACCCGTG...AGAGACAGAAGGGAGCTGGGGATTGGCGACTCCTGAAGTTGGGGCAGTGGGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CAA 90 bp AAGACTCCTTCCTTACCACAGACAAGAGGAAAGATCTGCCCCGGAGTGTGGGGATCCCCATCTAGGCCTTaGGTTCAGCGGCCTGCGGGG +
Preference number: 5 (lower is better)
Translates to: KTPSLPQTRGKICPGVWGSPSRP*VQRPAG
Trigger: CCCCGCAGGCCGCTGAACCAAAGGCCTAGATGGGGA...TCCCCACACTCCGGGGCAGATCTTTCCTCTTGTCTGTGGTAAGGAAGGAGTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000453327.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CAA 90 bp GAGACAGTGCAAAGGTTACAATGCGCGTGTCGTCTCCTTGTGCTTCTCAGAGGGTCCCCATCTAGGCCTTaGGTTCAGCGGCCTGCGGGG +
Preference number: 5 (lower is better)
Translates to: ETVQRLQCACRLLVLLRGSPSRP*VQRPAG
Trigger: CCCCGCAGGCCGCTGAACCAAAGGCCTAGATGGGGA...CCCTCTGAGAAGCACAAGGAGACGACACGCGCATTGTAACCTTTGCACTGTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
ENST00000552633.2
CDS-3UTR CAA 90 bp GGCTATCTCTACAGCAACCCCTTCCCTGGGGATGCCACTGTCAGCTGGGCAGAGTTCCTGCCAGGAGACTaGGGTTTGGGGACAGTCACT +
Preference number: 5 (lower is better)
Translates to: GYLYSNPFPGDATVSWAEFLPGD*GLGTVT
Trigger: AGTGACTGTCCCCAAACCCAAGTCTCCTGGCAGGAA...CTCTGCCCAGCTGACAGTGGCATCCCCAGGGAAGGGGTTGCTGTAGAGATAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CAA 90 bp GCCTTTGGTGACTGGTGGCAGCAGAATGTAGATGGACACTCAGATGGCAGACAGAGGCCTGAAGAGGGGTaGGGGCTCAGGCCTGGAAGG +
Preference number: 5 (lower is better)
Translates to: AFGDWWQQNVDGHSDGRQRPEEG*GLRPGR
Trigger: CCTTCCAGGCCTGAGCCCCAACCCCTCTTCAGGCCT...CTGTCTGCCATCTGAGTGTCCATCTACATTCTGCTGCCACCAGTCACCAAAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR CAA 90 bp GGCTATCTCTACAGCAACCCCTTCCCTGGGGATGCCACTGTCAGCTGGGCAGAGCGCATGTTGAAGGGTTaGGGTTTGAAGCTGCGGAAG +
Preference number: 5 (lower is better)
Translates to: GYLYSNPFPGDATVSWAERMLKG*GLKLRK
Trigger: CTTCCGCAGCTTCAAACCCAAACCCTTCAACATGCG...CTCTGCCCAGCTGACAGTGGCATCCCCAGGGAAGGGGTTGCTGTAGAGATAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR CAA 90 bp ACTTGGCTTAGTGTCCAGGGTAGACCTCCATCCCCTGGGTGGGGGCTATCTCTACACGGGTTGTGTCTTTaGACGTCGTCCAGGCTGAGG +
Preference number: 5 (lower is better)
Translates to: TWLSVQGRPPSPGWGLSLHGLCL*TSSRLR
Trigger: CCTCAGCCTGGACGACGTCAAAAGACACAACCCGTG...TAGAGATAGCCCCCACCCAGGGGATGGAGGTCTACCCTGGACACTAAGCCAAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CAA 90 bp ACTTATAGGTATCAGGATGTAGCCTACAGCACCAGGGCCGCATCTTGTCCCCATTCCCCATCTAGGCCTTaGGTTCAGCGGCCTGCGGGG +
Preference number: 5 (lower is better)
Translates to: TYRYQDVAYSTRAASCPHSPSRP*VQRPAG
Trigger: CCCCGCAGGCCGCTGAACCAAAGGCCTAGATGGGGA...ATGGGGACAAGATGCGGCCCTGGTGCTGTAGGCTACATCCTGATACCTATAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CAA 90 bp TGTGTGTACACAGTACAGACACCAGGGGAGAGAGTCCAACTCACAGACAAGAGGTCCCCATCTAGGCCTTaGGTTCAGCGGCCTGCGGGG +
Preference number: 5 (lower is better)
Translates to: CVYTVQTPGERVQLTDKRSPSRP*VQRPAG
Trigger: CCCCGCAGGCCGCTGAACCAAAGGCCTAGATGGGGA...CCTCTTGTCTGTGAGTTGGACTCTCTCCCCTGGTGTCTGTACTGTGTACACACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552633.2
CDS-3UTR CAA 90 bp CTATCTCTACAGCAACCCCTTCCCTGGGGATGCCACTGTCAGCTGGGCAGAGGGGGCCCTCCACCTCACTaGTCTCTCATTAAGATAGGG +
Preference number: 5 (lower is better)
Translates to: LSLQQPLPWGCHCQLGRGGPPPH*SLIKIG
Trigger: CCCTATCTTAATGAGAGACAAGTGAGGTGGAGGGCC...CCCTCTGCCCAGCTGACAGTGGCATCCCCAGGGAAGGGGTTGCTGTAGAGATAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS TCA 90 bp CAGCCCTCGCCCCTCTGTAGCTCTAGTAGTGCCTTAGGCCCTCCATaGTTACAGATCCTGCCAGGGCTCCCTACAGAGCACTGTCTTCTT +
Preference number: 5 (lower is better)
Translates to: QPSPLCSSSSALGPP*LQILPGLPTEHCLL
Trigger: AAGAAGACAGTGCTCTGTAGGGAGCCCTGGCAGGATCTGTAATCATGGAGGGCCTAAGGCACTACTAGAGCTACAGAGGGGCGAGGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549792.1
CDS CCA 90 bp TTCCCTCACCACTTACCAAGACAACAGGGTTTGGGGAAGGGCCTCTaGGGTGGAGGACCCTCATGGGACAGAAGTGAGCACCCTGCTTTT +
Preference number: 5 (lower is better)
Translates to: FPHHLPRQQGLGKGL*GGGPSWDRSEHPAF
Trigger: AAAAGCAGGGTGCTCACTTCTGTCCCATGAGGGTCCTCCACCCCAGAGGCCCTTCCCCAAACCCTGTTGTCTTGGTAAGTGGTGAGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551199.1
CDS-3UTR CAA 90 bp CTATCTCTACAGCAACCCCTTCCCTGGGGATGCCACTGTCAGCTGGGCAGAGGGCTATGGATCTGCACTTaGATGCCTGCTTCGAAGGAC +
Preference number: 5 (lower is better)
Translates to: LSLQQPLPWGCHCQLGRGLWICT*MPASKD
Trigger: GTCCTTCGAAGCAGGCATCAAAGTGCAGATCCATAG...CCCTCTGCCCAGCTGACAGTGGCATCCCCAGGGAAGGGGTTGCTGTAGAGATAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CAA 90 bp AAGACTCCTTCCTTACCACAGACAAGAGGAAAGATCTGCCCCGGAGTGTGGGGATCCATGGTAACAGCTTaGCAGGTGCCCCAGGGTGGG +
Preference number: 5 (lower is better)
Translates to: KTPSLPQTRGKICPGVWGSMVTA*QVPQGG
Trigger: CCCACCCTGGGGCACCTGCAAAGCTGTTACCATGGA...TCCCCACACTCCGGGGCAGATCTTTCCTCTTGTCTGTGGTAAGGAAGGAGTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000453327.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CAA 90 bp CATCCCACTGCCCCAACTTCAGGAGTCGCCAATCCCCAGCTCCCTTCTGTCTCTTCCGCACTGCTCCTTTaGGCCTCCTTCTGGCATTTT +
Preference number: 5 (lower is better)
Translates to: HPTAPTSGVANPQLPSVSSALLL*ASFWHF
Trigger: AAAATGCCAGAAGGAGGCCAAAAGGAGCAGTGCGGA...AGAGACAGAAGGGAGCTGGGGATTGGCGACTCCTGAAGTTGGGGCAGTGGGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CAA 90 bp TTGTGCTTCTCAGAGGGATGTGTGTACACAGTACAGACACCAGGGGAGAGAGTCCTGAGGGCCACGCCCTaGTCCGCACTGCTCCTTTTG +
Preference number: 5 (lower is better)
Translates to: LCFSEGCVYTVQTPGERVLRATP*SALLLL
Trigger: CAAAAGGAGCAGTGCGGACAAGGGCGTGGCCCTCAG...GACTCTCTCCCCTGGTGTCTGTACTGTGTACACACATCCCTCTGAGAAGCACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
ENST00000552633.2
CDS-3UTR CAA 90 bp TGCTTCTCAGAGGGATGTGTGTACACAGTACAGACACCAGGGGAGAGAGTCCAACTGAGGGCCACGCCCTaGTCCGCACTGCTCCTTTTG +
Preference number: 5 (lower is better)
Translates to: CFSEGCVYTVQTPGERVQLRATP*SALLLL
Trigger: CAAAAGGAGCAGTGCGGACAAGGGCGTGGCCCTCAG...TTGGACTCTCTCCCCTGGTGTCTGTACTGTGTACACACATCCCTCTGAGAAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
ENST00000552633.2
CDS-3UTR CAA 90 bp ACAGTACAGACACCAGGGGAGAGAGTCCAACTCTTTATACAGGCGAAGGCATTCTCCCCATCTAGGCCTTaGGTTCAGCGGCCTGCGGGG +
Preference number: 5 (lower is better)
Translates to: TVQTPGERVQLFIQAKAFSPSRP*VQRPAG
Trigger: CCCCGCAGGCCGCTGAACCAAAGGCCTAGATGGGGA...GAATGCCTTCGCCTGTATAAAGAGTTGGACTCTCTCCCCTGGTGTCTGTACTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CAA 90 bp CATAAGAAAATTTATGGACGTGGCCCTCTACAAGGGCCTCCGGGAGAGGGACCACACTGGGAAGGGCCTTaGGTGACTGGTGGCAGCAGA +
Preference number: 5 (lower is better)
Translates to: HKKIYGRGPLQGPPGEGPHWEGP*VTGGSR
Trigger: TCTGCTGCCACCAGTCACCAAAGGCCCTTCCCAGTG...TGGTCCCTCTCCCGGAGGCCCTTGTAGAGGGCCACGTCCATAAATTTTCTTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CAA 90 bp TCCAGCTCCAGGCCAATGCAGCTGCTCACAGGTCCTGTTCTGGGATTGAAGACCTTCCTGCCAGGAGACTaGGGTTTGGGGACAGTCACT +
Preference number: 5 (lower is better)
Translates to: SSSRPMQLLTGPVLGLKTFLPGD*GLGTVT
Trigger: AGTGACTGTCCCCAAACCCAAGTCTCCTGGCAGGAA...GGTCTTCAATCCCAGAACAGGACCTGTGAGCAGCTGCATTGGCCTGGAGCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR CAA 90 bp CTATCTCTACAGCAACCCCTTCCCTGGGGATGCCACTGTCAGCTGGGCAGAGGGGAGAAGCAAATGAAGTaGGGGAAGAGGATGTGGGAG +
Preference number: 5 (lower is better)
Translates to: LSLQQPLPWGCHCQLGRGEKQMK*GKRMWE
Trigger: CTCCCACATCCTCTTCCCCAACTTCATTTGCTTCTC...CCCTCTGCCCAGCTGACAGTGGCATCCCCAGGGAAGGGGTTGCTGTAGAGATAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CAA 90 bp AAAGGTTACAATGCGCGTGTCGTCTCCTTGTGCTTCTCAGAGGGATGTGTGTACAGGCCTGAAGAGGGGTaGGGGCTCAGGCCTGGAAGG +
Preference number: 5 (lower is better)
Translates to: KGYNARVVSLCFSEGCVYRPEEG*GLRPGR
Trigger: CCTTCCAGGCCTGAGCCCCAACCCCTCTTCAGGCCT...GTACACACATCCCTCTGAGAAGCACAAGGAGACGACACGCGCATTGTAACCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR CAA 90 bp CATAAGAAAATTTATGGACGTGGCCCTCTACAAGGGCCTCCGGGAGAGGGACCACGCACAGCATTAGTGTaGCAGAGGGTGACTGCCGGG +
Preference number: 5 (lower is better)
Translates to: HKKIYGRGPLQGPPGEGPRTALV*QRVTAG
Trigger: CCCGGCAGTCACCCTCTGCAACACTAATGCTGTGCG...TGGTCCCTCTCCCGGAGGCCCTTGTAGAGGGCCACGTCCATAAATTTTCTTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552438.5
CDS-3UTR CAA 90 bp TCCTTTGTCGCCACTGAGACAGTGCAAAGGTTACAATGCGCGTGTCGTCTCCTTCGGAACTCGTTGAGGTaGCACAGCGTGACAGCAGGG +
Preference number: 5 (lower is better)
Translates to: SFVATETVQRLQCACRLLRNSLR*HSVTAG
Trigger: CCCTGCTGTCACGCTGTGCAACCTCAACGAGTTCCG...AAGGAGACGACACGCGCATTGTAACCTTTGCACTGTCTCAGTGGCGACAAAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR CAA 90 bp ACTTATAGGTATCAGGATGTAGCCTACAGCACCAGGGCCGCATCTTGTCCCCATTCCATGGTAACAGCTTaGCAGGTGCCCCAGGGTGGG +
Preference number: 5 (lower is better)
Translates to: TYRYQDVAYSTRAASCPHSMVTA*QVPQGG
Trigger: CCCACCCTGGGGCACCTGCAAAGCTGTTACCATGGA...ATGGGGACAAGATGCGGCCCTGGTGCTGTAGGCTACATCCTGATACCTATAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CAA 90 bp ACAGCTTCCTTTGTCGCCACTGAGACAGTGCAAAGGTTACAATGCGCGTGTCGTTCCATGGTAACAGCTTaGCAGGTGCCCCAGGGTGGG +
Preference number: 5 (lower is better)
Translates to: TASFVATETVQRLQCACRSMVTA*QVPQGG
Trigger: CCCACCCTGGGGCACCTGCAAAGCTGTTACCATGGA...ACGACACGCGCATTGTAACCTTTGCACTGTCTCAGTGGCGACAAAGGAAGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CAA 90 bp GCTTCTCAGAGGGATGTGTGTACACAGTACAGACACCAGGGGAGAGAGTCCAACTTCTTGGCCAGGTACTaGGCTGAGGCTTTGCTGGGG +
Preference number: 5 (lower is better)
Translates to: ASQRDVCTQYRHQGRESNFLARY*AEALLG
Trigger: CCCCAGCAAAGCCTCAGCCAAGTACCTGGCCAAGAA...GTTGGACTCTCTCCCCTGGTGTCTGTACTGTGTACACACATCCCTCTGAGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CAA 90 bp GAGACAGTGCAAAGGTTACAATGCGCGTGTCGTCTCCTTGTGCTTCTCAGAGGGTTCTTGGCCAGGTACTaGGCTGAGGCTTTGCTGGGG +
Preference number: 5 (lower is better)
Translates to: ETVQRLQCACRLLVLLRGFLARY*AEALLG
Trigger: CCCCAGCAAAGCCTCAGCCAAGTACCTGGCCAAGAA...CCCTCTGAGAAGCACAAGGAGACGACACGCGCATTGTAACCTTTGCACTGTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CAA 90 bp CGTCTCCTTGTGCTTCTCAGAGGGATGTGTGTACACAGTACAGACACCAGGGGAGTGAGCACCCTGCTTTaGGATGATAGGGAGCCACGC +
Preference number: 5 (lower is better)
Translates to: RLLVLLRGMCVHSTDTRGVSTLL*DDREPR
Trigger: GCGTGGCTCCCTATCATCCAAAAGCAGGGTGCTCAC...TCCCCTGGTGTCTGTACTGTGTACACACATCCCTCTGAGAAGCACAAGGAGACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228468.8
CDS-3UTR CAA 90 bp ACTTATAGGTATCAGGATGTAGCCTACAGCACCAGGGCCGCATCTTGTCCCCATCCAAGACAACAGGGTTaGGGGAAGGGCCTCTGGGGT +
Preference number: 5 (lower is better)
Translates to: TYRYQDVAYSTRAASCPHPRQQG*GKGLWG
Trigger: ACCCCAGAGGCCCTTCCCCAAACCCTGTTGTCTTGG...ATGGGGACAAGATGCGGCCCTGGTGCTGTAGGCTACATCCTGATACCTATAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000228468.8
CDS-3UTR CAA 90 bp TCTATGGTCAAGACTCCTTCCTTACCACAGACAAGAGGAAAGATCTGCCCCGGACTGAGGGCCACGCCCTaGTCCGCACTGCTCCTTTTG +
Preference number: 5 (lower is better)
Translates to: SMVKTPSLPQTRGKICPGLRATP*SALLLL
Trigger: CAAAAGGAGCAGTGCGGACAAGGGCGTGGCCCTCAG...TCCGGGGCAGATCTTTCCTCTTGTCTGTGGTAAGGAAGGAGTCTTGACCATAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000453327.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CAA 90 bp GCCTTTGGTGACTGGTGGCAGCAGAATGTAGATGGACACTCAGATGGCAGACAGCACGGGTTGTGTCTTTaGACGTCGTCCAGGCTGAGG +
Preference number: 5 (lower is better)
Translates to: AFGDWWQQNVDGHSDGRQHGLCL*TSSRLR
Trigger: CCTCAGCCTGGACGACGTCAAAAGACACAACCCGTG...CTGTCTGCCATCTGAGTGTCCATCTACATTCTGCTGCCACCAGTCACCAAAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CAA 90 bp AAGACTCCTTCCTTACCACAGACAAGAGGAAAGATCTGCCCCGGAGTGTGGGGAAGGCTCTCGCACGGGTaGTGTCTTTTGACGTCGTCC +
Preference number: 5 (lower is better)
Translates to: KTPSLPQTRGKICPGVWGRLSHG*CLLTSS
Trigger: GGACGACGTCAAAAGACACAACCCGTGCGAGAGCCT...TCCCCACACTCCGGGGCAGATCTTTCCTCTTGTCTGTGGTAAGGAAGGAGTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000453327.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CAA 90 bp CATAAGAAAATTTATGGACGTGGCCCTCTACAAGGGCCTCCGGGAGAGGGACCAAGGCTCTCGCACGGGTaGTGTCTTTTGACGTCGTCC +
Preference number: 5 (lower is better)
Translates to: HKKIYGRGPLQGPPGEGPRLSHG*CLLTSS
Trigger: GGACGACGTCAAAAGACACAACCCGTGCGAGAGCCT...TGGTCCCTCTCCCGGAGGCCCTTGTAGAGGGCCACGTCCATAAATTTTCTTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CAA 90 bp GAGGACTCTATGGTCAAGACTCCTTCCTTACCACAGACAAGAGGAAAGATCTGCTCCCCATCTAGGCCTTaGGTTCAGCGGCCTGCGGGG +
Preference number: 5 (lower is better)
Translates to: EDSMVKTPSLPQTRGKICSPSRP*VQRPAG
Trigger: CCCCGCAGGCCGCTGAACCAAAGGCCTAGATGGGGA...GCAGATCTTTCCTCTTGTCTGTGGTAAGGAAGGAGTCTTGACCATAGAGTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000453327.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CAA 90 bp TCCTTTGTCGCCACTGAGACAGTGCAAAGGTTACAATGCGCGTGTCGTCTCCTTCACTGGGAAGGGCCTTaGGTGACTGGTGGCAGCAGA +
Preference number: 5 (lower is better)
Translates to: SFVATETVQRLQCACRLLHWEGP*VTGGSR
Trigger: TCTGCTGCCACCAGTCACCAAAGGCCCTTCCCAGTG...AAGGAGACGACACGCGCATTGTAACCTTTGCACTGTCTCAGTGGCGACAAAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CAA 90 bp TCCTTTGTCGCCACTGAGACAGTGCAAAGGTTACAATGCGCGTGTCGTCTCCTTCCAGGAGACTTGGGTTaGGGGACAGTCACTGGGCTG +
Preference number: 5 (lower is better)
Translates to: SFVATETVQRLQCACRLLPGDLG*GTVTGL
Trigger: CAGCCCAGTGACTGTCCCCAAACCCAAGTCTCCTGG...AAGGAGACGACACGCGCATTGTAACCTTTGCACTGTCTCAGTGGCGACAAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CAA 90 bp CTATGGTCAAGACTCCTTCCTTACCACAGACAAGAGGAAAGATCTGCCCCGGAGCCAGGAGACTTGGGTTaGGGGACAGTCACTGGGCTG +
Preference number: 5 (lower is better)
Translates to: LWSRLLPYHRQEERSAPEPGDLG*GTVTGL
Trigger: CAGCCCAGTGACTGTCCCCAAACCCAAGTCTCCTGG...CTCCGGGGCAGATCTTTCCTCTTGTCTGTGGTAAGGAAGGAGTCTTGACCATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CAA 90 bp GCTTCTCAGAGGGATGTGTGTACACAGTACAGACACCAGGGGAGAGAGTCCAACGCGCGTGTCGTCTCCTaGTGCTTCTCAGAGGGATGT +
Preference number: 5 (lower is better)
Translates to: ASQRDVCTQYRHQGRESNARVVS*CFSEGC
Trigger: ACATCCCTCTGAGAAGCACAAGGAGACGACACGCGC...GTTGGACTCTCTCCCCTGGTGTCTGTACTGTGTACACACATCCCTCTGAGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
ENST00000552633.2
CDS-3UTR CAA 90 bp CATCCCACTGCCCCAACTTCAGGAGTCGCCAATCCCCAGCTCCCTTCTGTCTCTGGTCCTGTTCTGGGATaGAAGACCAAGACACAGCTA +
Preference number: 5 (lower is better)
Translates to: HPTAPTSGVANPQLPSVSGPVLG*KTKTQL
Trigger: TAGCTGTGTCTTGGTCTTCAATCCCAGAACAGGACC...AGAGACAGAAGGGAGCTGGGGATTGGCGACTCCTGAAGTTGGGGCAGTGGGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR CAA 90 bp TATGGTCAAGACTCCTTCCTTACCACAGACAAGAGGAAAGATCTGCCCCGGAGTCGGAACTCGTTGAGGTaGCACAGCGTGACAGCAGGG +
Preference number: 5 (lower is better)
Translates to: YGQDSFLTTDKRKDLPRSRNSLR*HSVTAG
Trigger: CCCTGCTGTCACGCTGTGCAACCTCAACGAGTTCCG...ACTCCGGGGCAGATCTTTCCTCTTGTCTGTGGTAAGGAAGGAGTCTTGACCATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR CAA 90 bp GCCTTTGGTGACTGGTGGCAGCAGAATGTAGATGGACACTCAGATGGCAGACAGGGTATCTCATACCTGTaGTTGAGCAGGGCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: AFGDWWQQNVDGHSDGRQGISYL*LSRASS
Trigger: GCTGCTGGCCCTGCTCAACAACAGGTATGAGATACC...CTGTCTGCCATCTGAGTGTCCATCTACATTCTGCTGCCACCAGTCACCAAAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR CAA 90 bp CGTCTCCTTGTGCTTCTCAGAGGGATGTGTGTACACAGTACAGACACCAGGGGACTGCGGAAGTTGGCTTaGTCCTGCAGTATCTCCAGC +
Preference number: 5 (lower is better)
Translates to: RLLVLLRGMCVHSTDTRGLRKLA*SCSISS
Trigger: GCTGGAGATACTGCAGGACAAAGCCAACTTCCGCAG...TCCCCTGGTGTCTGTACTGTGTACACACATCCCTCTGAGAAGCACAAGGAGACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR CAA 90 bp GCCTTTGGTGACTGGTGGCAGCAGAATGTAGATGGACACTCAGATGGCAGACAGCTGCGGAAGTTGGCTTaGTCCTGCAGTATCTCCAGC +
Preference number: 5 (lower is better)
Translates to: AFGDWWQQNVDGHSDGRQLRKLA*SCSISS
Trigger: GCTGGAGATACTGCAGGACAAAGCCAACTTCCGCAG...CTGTCTGCCATCTGAGTGTCCATCTACATTCTGCTGCCACCAGTCACCAAAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR CAA 90 bp ACAGTACAGACACCAGGGGAGAGAGTCCAACTCTTTATACAGGCGAAGGCATTCTCCATGGTAACAGCTTaGCAGGTGCCCCAGGGTGGG +
Preference number: 5 (lower is better)
Translates to: TVQTPGERVQLFIQAKAFSMVTA*QVPQGG
Trigger: CCCACCCTGGGGCACCTGCAAAGCTGTTACCATGGA...GAATGCCTTCGCCTGTATAAAGAGTTGGACTCTCTCCCCTGGTGTCTGTACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CAA 90 bp CTATGGTCAAGACTCCTTCCTTACCACAGACAAGAGGAAAGATCTGCCCCGGAGTTCTTGGCCAGGTACTaGGCTGAGGCTTTGCTGGGG +
Preference number: 5 (lower is better)
Translates to: LWSRLLPYHRQEERSAPEFLARY*AEALLG
Trigger: CCCCAGCAAAGCCTCAGCCAAGTACCTGGCCAAGAA...CTCCGGGGCAGATCTTTCCTCTTGTCTGTGGTAAGGAAGGAGTCTTGACCATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000453327.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CAA 90 bp AAGAATGGGATAGAGGCAGAGAGAGGACTCTATGGTCAAGACTCCTTCCTTACCCTGAGGGCCACGCCCTaGTCCGCACTGCTCCTTTTG +
Preference number: 5 (lower is better)
Translates to: KNGIEAERGLYGQDSFLTLRATP*SALLLL
Trigger: CAAAAGGAGCAGTGCGGACAAGGGCGTGGCCCTCAG...GGTAAGGAAGGAGTCTTGACCATAGAGTCCTCTCTCTGCCTCTATCCCATTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000453327.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CAA 90 bp GCAAAGGTTACAATGCGCGTGTCGTCTCCTTGTGCTTCTCAGAGGGATGTGTGTCACGGGTTGTGTCTTTaGACGTCGTCCAGGCTGAGG +
Preference number: 5 (lower is better)
Translates to: AKVTMRVSSPCASQRDVCHGLCL*TSSRLR
Trigger: CCTCAGCCTGGACGACGTCAAAAGACACAACCCGTG...ACACACATCCCTCTGAGAAGCACAAGGAGACGACACGCGCATTGTAACCTTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
ENST00000552633.2
CDS-3UTR CAA 90 bp CTATGGTCAAGACTCCTTCCTTACCACAGACAAGAGGAAAGATCTGCCCCGGAGCACGGGTTGTGTCTTTaGACGTCGTCCAGGCTGAGG +
Preference number: 5 (lower is better)
Translates to: LWSRLLPYHRQEERSAPEHGLCL*TSSRLR
Trigger: CCTCAGCCTGGACGACGTCAAAAGACACAACCCGTG...CTCCGGGGCAGATCTTTCCTCTTGTCTGTGGTAAGGAAGGAGTCTTGACCATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000453327.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CAA 90 bp TGCTTCTCAGAGGGATGTGTGTACACAGTACAGACACCAGGGGAGAGAGTCCAAAGGCTCTCGCACGGGTaGTGTCTTTTGACGTCGTCC +
Preference number: 5 (lower is better)
Translates to: CFSEGCVYTVQTPGERVQRLSHG*CLLTSS
Trigger: GGACGACGTCAAAAGACACAACCCGTGCGAGAGCCT...TTGGACTCTCTCCCCTGGTGTCTGTACTGTGTACACACATCCCTCTGAGAAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
ENST00000552633.2
CDS-3UTR CAA 90 bp CTATGGTCAAGACTCCTTCCTTACCACAGACAAGAGGAAAGATCTGCCCCGGAGAGGCTCTCGCACGGGTaGTGTCTTTTGACGTCGTCC +
Preference number: 5 (lower is better)
Translates to: LWSRLLPYHRQEERSAPERLSHG*CLLTSS
Trigger: GGACGACGTCAAAAGACACAACCCGTGCGAGAGCCT...CTCCGGGGCAGATCTTTCCTCTTGTCTGTGGTAAGGAAGGAGTCTTGACCATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000453327.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CAA 90 bp CTTCTCAGAGGGATGTGTGTACACAGTACAGACACCAGGGGAGAGAGTCCAACTAGGCTCTCGCACGGGTaGTGTCTTTTGACGTCGTCC +
Preference number: 5 (lower is better)
Translates to: LLRGMCVHSTDTRGESPTRLSHG*CLLTSS
Trigger: GGACGACGTCAAAAGACACAACCCGTGCGAGAGCCT...AGTTGGACTCTCTCCCCTGGTGTCTGTACTGTGTACACACATCCCTCTGAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
ENST00000552633.2
CDS-3UTR CAA 90 bp ATGCGCGTGTCGTCTCCTTGTGCTTCTCAGAGGGATGTGTGTACACAGTACAGAAGGCTCTCGCACGGGTaGTGTCTTTTGACGTCGTCC +
Preference number: 5 (lower is better)
Translates to: MRVSSPCASQRDVCTQYRRLSHG*CLLTSS
Trigger: GGACGACGTCAAAAGACACAACCCGTGCGAGAGCCT...TCTGTACTGTGTACACACATCCCTCTGAGAAGCACAAGGAGACGACACGCGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
ENST00000552633.2
CDS-3UTR CAA 90 bp TATGGTCAAGACTCCTTCCTTACCACAGACAAGAGGAAAGATCTGCCCCGGAGTCACTGGGAAGGGCCTTaGGTGACTGGTGGCAGCAGA +
Preference number: 5 (lower is better)
Translates to: YGQDSFLTTDKRKDLPRSHWEGP*VTGGSR
Trigger: TCTGCTGCCACCAGTCACCAAAGGCCCTTCCCAGTG...ACTCCGGGGCAGATCTTTCCTCTTGTCTGTGGTAAGGAAGGAGTCTTGACCATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CAA 90 bp GCTTCTCAGAGGGATGTGTGTACACAGTACAGACACCAGGGGAGAGAGTCCAACCACCAGGGCCGCATCTaGTCCCCATTACCACTTCTT +
Preference number: 5 (lower is better)
Translates to: ASQRDVCTQYRHQGRESNHQGRI*SPLPLL
Trigger: AAGAAGTGGTAATGGGGACAAGATGCGGCCCTGGTG...GTTGGACTCTCTCCCCTGGTGTCTGTACTGTGTACACACATCCCTCTGAGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CAA 90 bp TGCTTCTCAGAGGGATGTGTGTACACAGTACAGACACCAGGGGAGAGAGTCCAAGCGCGTGTCGTCTCCTaGTGCTTCTCAGAGGGATGT +
Preference number: 5 (lower is better)
Translates to: CFSEGCVYTVQTPGERVQARVVS*CFSEGC
Trigger: ACATCCCTCTGAGAAGCACAAGGAGACGACACGCGC...TTGGACTCTCTCCCCTGGTGTCTGTACTGTGTACACACATCCCTCTGAGAAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
ENST00000552633.2
CDS-3UTR CAA 90 bp AGGGATGTGTGTACACAGTACAGACACCAGGGGAGAGAGTCCAACTCACAGACAGCGCGTGTCGTCTCCTaGTGCTTCTCAGAGGGATGT +
Preference number: 5 (lower is better)
Translates to: RDVCTQYRHQGRESNSQTARVVS*CFSEGC
Trigger: ACATCCCTCTGAGAAGCACAAGGAGACGACACGCGC...TGTCTGTGAGTTGGACTCTCTCCCCTGGTGTCTGTACTGTGTACACACATCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552633.2
CDS-3UTR CAA 90 bp AAGTTGGGGAAGAGGATGTGGGAGAGTTCCATAAGAAAATTTATGGACGTGGCCAGGCCTGAAGAGGGGTaGGGGCTCAGGCCTGGAAGG +
Preference number: 5 (lower is better)
Translates to: KLGKRMWESSIRKFMDVARPEEG*GLRPGR
Trigger: CCTTCCAGGCCTGAGCCCCAACCCCTCTTCAGGCCT...GGCCACGTCCATAAATTTTCTTATGGAACTCTCCCACATCCTCTTCCCCAACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR CAA 90 bp CGTCTCCTTGTGCTTCTCAGAGGGATGTGTGTACACAGTACAGACACCAGGGGATGCATGGGCTTCACCTaGAAGTCTTCAGCGCTGCAG +
Preference number: 5 (lower is better)
Translates to: RLLVLLRGMCVHSTDTRGCMGFT*KSSALQ
Trigger: CTGCAGCGCTGAAGACTTCAAGGTGAAGCCCATGCA...TCCCCTGGTGTCTGTACTGTGTACACACATCCCTCTGAGAAGCACAAGGAGACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550558.5
CDS CCA 90 bp GAGCTCCTTTGCCACCTGCATGGGCTTCTAGTTGGGGTTGACAGTTaGGAGGTATTGGTAATGGCTCAGAAGGCAGGAGGAAAGATTGGG +
Preference number: 5 (lower is better)
Translates to: ELLCHLHGLLVGVDS*EVLVMAQKAGGKIG
Trigger: CCCAATCTTTCCTCCTGCCTTCTGAGCCATTACCAATACCTCCCAACTGTCAACCCCAACTAGAAGCCCATGCAGGTGGCAAAGGAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549792.1
CDS-3UTR CAA 90 bp TCCTTTGTCGCCACTGAGACAGTGCAAAGGTTACAATGCGCGTGTCGTCTCCTTGGTATCTCATACCTGTaGTTGAGCAGGGCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: SFVATETVQRLQCACRLLGISYL*LSRASS
Trigger: GCTGCTGGCCCTGCTCAACAACAGGTATGAGATACC...AAGGAGACGACACGCGCATTGTAACCTTTGCACTGTCTCAGTGGCGACAAAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR CAA 90 bp TTGTGCTTCTCAGAGGGATGTGTGTACACAGTACAGACACCAGGGGAGAGAGTCCTGCGGAAGTTGGCTTaGTCCTGCAGTATCTCCAGC +
Preference number: 5 (lower is better)
Translates to: LCFSEGCVYTVQTPGERVLRKLA*SCSISS
Trigger: GCTGGAGATACTGCAGGACAAAGCCAACTTCCGCAG...GACTCTCTCCCCTGGTGTCTGTACTGTGTACACACATCCCTCTGAGAAGCACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR CAA 90 bp CATAAGAAAATTTATGGACGTGGCCCTCTACAAGGGCCTCCGGGAGAGGGACCACGCATGTTGAAGGGTTaGGGTTTGAAGCTGCGGAAG +
Preference number: 5 (lower is better)
Translates to: HKKIYGRGPLQGPPGEGPRMLKG*GLKLRK
Trigger: CTTCCGCAGCTTCAAACCCAAACCCTTCAACATGCG...TGGTCCCTCTCCCGGAGGCCCTTGTAGAGGGCCACGTCCATAAATTTTCTTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR CAA 90 bp GCTTCCTTTGTCGCCACTGAGACAGTGCAAAGGTTACAATGCGCGTGTCGTCTCTCCGCACTGCTCCTTTaGGCCTCCTTCTGGCATTTT +
Preference number: 5 (lower is better)
Translates to: ASFVATETVQRLQCACRLSALLL*ASFWHF
Trigger: AAAATGCCAGAAGGAGGCCAAAAGGAGCAGTGCGGA...GAGACGACACGCGCATTGTAACCTTTGCACTGTCTCAGTGGCGACAAAGGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CAA 90 bp CGTCTCCTTGTGCTTCTCAGAGGGATGTGTGTACACAGTACAGACACCAGGGGATCCGCACTGCTCCTTTaGGCCTCCTTCTGGCATTTT +
Preference number: 5 (lower is better)
Translates to: RLLVLLRGMCVHSTDTRGSALLL*ASFWHF
Trigger: AAAATGCCAGAAGGAGGCCAAAAGGAGCAGTGCGGA...TCCCCTGGTGTCTGTACTGTGTACACACATCCCTCTGAGAAGCACAAGGAGACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
ENST00000552633.2
CDS-3UTR CAA 90 bp AAAGGTTACAATGCGCGTGTCGTCTCCTTGTGCTTCTCAGAGGGATGTGTGTACCACGGGTTGTGTCTTTaGACGTCGTCCAGGCTGAGG +
Preference number: 5 (lower is better)
Translates to: KGYNARVVSLCFSEGCVYHGLCL*TSSRLR
Trigger: CCTCAGCCTGGACGACGTCAAAAGACACAACCCGTG...GTACACACATCCCTCTGAGAAGCACAAGGAGACGACACGCGCATTGTAACCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
ENST00000552633.2
CDS-3UTR CAA 90 bp ATAAGAAAATTTATGGACGTGGCCCTCTACAAGGGCCTCCGGGAGAGGGACCAGGGTACATTCTCTGGTTaGGGGCCAAATTCCAGACCC +
Preference number: 5 (lower is better)
Translates to: IRKFMDVALYKGLRERDQGTFSG*GPNSRP
Trigger: GGGTCTGGAATTTGGCCCCAAACCAGAGAATGTACC...CTGGTCCCTCTCCCGGAGGCCCTTGTAGAGGGCCACGTCCATAAATTTTCTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CAA 90 bp TTGTGCTTCTCAGAGGGATGTGTGTACACAGTACAGACACCAGGGGAGAGAGTCTTCCTGCCAGGAGACTaGGGTTTGGGGACAGTCACT +
Preference number: 5 (lower is better)
Translates to: LCFSEGCVYTVQTPGERVFLPGD*GLGTVT
Trigger: AGTGACTGTCCCCAAACCCAAGTCTCCTGGCAGGAA...GACTCTCTCCCCTGGTGTCTGTACTGTGTACACACATCCCTCTGAGAAGCACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CAA 90 bp AAGGTTACAATGCGCGTGTCGTCTCCTTGTGCTTCTCAGAGGGATGTGTGTACAGCGCGTGTCGTCTCCTaGTGCTTCTCAGAGGGATGT +
Preference number: 5 (lower is better)
Translates to: KVTMRVSSPCASQRDVCTARVVS*CFSEGC
Trigger: ACATCCCTCTGAGAAGCACAAGGAGACGACACGCGC...TGTACACACATCCCTCTGAGAAGCACAAGGAGACGACACGCGCATTGTAACCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
ENST00000552633.2
CDS-3UTR CAA 90 bp TCCTTTGTCGCCACTGAGACAGTGCAAAGGTTACAATGCGCGTGTCGTCTCCTTTGTGAAGACCCTTTCTaGCCCTCTGTGTGCCCTGGA +
Preference number: 5 (lower is better)
Translates to: SFVATETVQRLQCACRLLCEDPF*PSVCPG
Trigger: TCCAGGGCACACAGAGGGCAAGAAAGGGTCTTCACA...AAGGAGACGACACGCGCATTGTAACCTTTGCACTGTCTCAGTGGCGACAAAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550558.5
CDS-3UTR CAA 90 bp TGCTTCTCAGAGGGATGTGTGTACACAGTACAGACACCAGGGGAGAGAGTCCAACTAAAGCGGAACTCGTaGAGGTTGCACAGCGTGACA +
Preference number: 5 (lower is better)
Translates to: CFSEGCVYTVQTPGERVQLKRNS*RLHSVT
Trigger: TGTCACGCTGTGCAACCTCAACGAGTTCCGCTTTAG...TTGGACTCTCTCCCCTGGTGTCTGTACTGTGTACACACATCCCTCTGAGAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR CAA 90 bp ACTCTATGGTCAAGACTCCTTCCTTACCACAGACAAGAGGAAAGATCTGCCCCGGGTATCTCATACCTGTaGTTGAGCAGGGCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: TLWSRLLPYHRQEERSAPGISYL*LSRASS
Trigger: GCTGCTGGCCCTGCTCAACAACAGGTATGAGATACC...CGGGGCAGATCTTTCCTCTTGTCTGTGGTAAGGAAGGAGTCTTGACCATAGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR CAA 90 bp AAGACTCCTTCCTTACCACAGACAAGAGGAAAGATCTGCCCCGGAGTGTGGGGATTGAAGCTGCGGAAGTaGGCTTTGTCCTGCAGTATC +
Preference number: 5 (lower is better)
Translates to: KTPSLPQTRGKICPGVWGLKLRK*ALSCSI
Trigger: GATACTGCAGGACAAAGCCAACTTCCGCAGCTTCAA...TCCCCACACTCCGGGGCAGATCTTTCCTCTTGTCTGTGGTAAGGAAGGAGTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR CAA 90 bp TGTGCTTCTCAGAGGGATGTGTGTACACAGTACAGACACCAGGGGAGAGAGTCCTTGAAGCTGCGGAAGTaGGCTTTGTCCTGCAGTATC +
Preference number: 5 (lower is better)
Translates to: CASQRDVCTQYRHQGRESLKLRK*ALSCSI
Trigger: GATACTGCAGGACAAAGCCAACTTCCGCAGCTTCAA...GGACTCTCTCCCCTGGTGTCTGTACTGTGTACACACATCCCTCTGAGAAGCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR CAA 90 bp AAGGTTACAATGCGCGTGTCGTCTCCTTGTGCTTCTCAGAGGGATGTGTGTACACGTGTGAAGACCACCTaGAAGTCTTCAGCGCTGCAG +
Preference number: 5 (lower is better)
Translates to: KVTMRVSSPCASQRDVCTRVKTT*KSSALQ
Trigger: CTGCAGCGCTGAAGACTTCAAGGTGGTCTTCACACG...TGTACACACATCCCTCTGAGAAGCACAAGGAGACGACACGCGCATTGTAACCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228468.8
ENST00000447966.7
CDS-3UTR CAA 90 bp TATGGTCAAGACTCCTTCCTTACCACAGACAAGAGGAAAGATCTGCCCCGGAGTCGTGTGAAGACCACCTaGAAGTCTTCAGCGCTGCAG +
Preference number: 5 (lower is better)
Translates to: YGQDSFLTTDKRKDLPRSRVKTT*KSSALQ
Trigger: CTGCAGCGCTGAAGACTTCAAGGTGGTCTTCACACG...ACTCCGGGGCAGATCTTTCCTCTTGTCTGTGGTAAGGAAGGAGTCTTGACCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228468.8
ENST00000447966.7
CDS-3UTR CAA 90 bp GATTCCAAAGATCCTACAGCCTTACTCTCCAGCTCCAGGCCAATGCAGCTGCTCCTATGGATCTGCACTTaGATGCCTGCTTCGAAGGAC +
Preference number: 5 (lower is better)
Translates to: DSKDPTALLSSSRPMQLLLWICT*MPASKD
Trigger: GTCCTTCGAAGCAGGCATCAAAGTGCAGATCCATAG...GAGCAGCTGCATTGGCCTGGAGCTGGAGAGTAAGGCTGTAGGATCTTTGGAATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR CAA 90 bp AAGAATGGGATAGAGGCAGAGAGAGGACTCTATGGTCAAGACTCCTTCCTTACCTTCTTGGCCAGGTACTaGGCTGAGGCTTTGCTGGGG +
Preference number: 5 (lower is better)
Translates to: KNGIEAERGLYGQDSFLTFLARY*AEALLG
Trigger: CCCCAGCAAAGCCTCAGCCAAGTACCTGGCCAAGAA...GGTAAGGAAGGAGTCTTGACCATAGAGTCCTCTCTCTGCCTCTATCCCATTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000453327.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CAA 90 bp AGTACAGACACCAGGGGAGAGAGTCCAACTCACAGACAAGAGGAAAGATCTGCCTCCGCACTGCTCCTTTaGGCCTCCTTCTGGCATTTT +
Preference number: 5 (lower is better)
Translates to: STDTRGESPTHRQEERSASALLL*ASFWHF
Trigger: AAAATGCCAGAAGGAGGCCAAAAGGAGCAGTGCGGA...GGCAGATCTTTCCTCTTGTCTGTGAGTTGGACTCTCTCCCCTGGTGTCTGTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552633.2
CDS-3UTR CAA 90 bp AAGTTGGGGAAGAGGATGTGGGAGAGTTCCATAAGAAAATTTATGGACGTGGCCCCAGGAGACTTGGGTTaGGGGACAGTCACTGGGCTG +
Preference number: 5 (lower is better)
Translates to: KLGKRMWESSIRKFMDVAPGDLG*GTVTGL
Trigger: CAGCCCAGTGACTGTCCCCAAACCCAAGTCTCCTGG...GGCCACGTCCATAAATTTTCTTATGGAACTCTCCCACATCCTCTTCCCCAACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CAA 90 bp ACTGAGACAGTGCAAAGGTTACAATGCGCGTGTCGTCTCCTTGTGCTTCTCAGACACCAGGGCCGCATCTaGTCCCCATTACCACTTCTT +
Preference number: 5 (lower is better)
Translates to: TETVQRLQCACRLLVLLRHQGRI*SPLPLL
Trigger: AAGAAGTGGTAATGGGGACAAGATGCGGCCCTGGTG...TCTGAGAAGCACAAGGAGACGACACGCGCATTGTAACCTTTGCACTGTCTCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CAA 90 bp ACCCAGAGCCCTGCCTGCTGTTCCCCTATCCAATGCACACTTTTTGGCCTCATTGAGAAGCAAATGAAGTaGGGGAAGAGGATGTGGGAG +
Preference number: 5 (lower is better)
Translates to: TQSPACCSPIQCTLFGLIEKQMK*GKRMWE
Trigger: CTCCCACATCCTCTTCCCCAACTTCATTTGCTTCTC...AATGAGGCCAAAAAGTGTGCATTGGATAGGGGAACAGCAGGCAGGGCTCTGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR CAA 90 bp CGTCTCCTTGTGCTTCTCAGAGGGATGTGTGTACACAGTACAGACACCAGGGGAGAGAAGCAAATGAAGTaGGGGAAGAGGATGTGGGAG +
Preference number: 5 (lower is better)
Translates to: RLLVLLRGMCVHSTDTRGEKQMK*GKRMWE
Trigger: CTCCCACATCCTCTTCCCCAACTTCATTTGCTTCTC...TCCCCTGGTGTCTGTACTGTGTACACACATCCCTCTGAGAAGCACAAGGAGACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CAA 90 bp CAGTGCAAAGGTTACAATGCGCGTGTCGTCTCCTTGTGCTTCTCAGAGGGATGTGGCCCTCCACCTCACTaGTCTCTCATTAAGATAGGG +
Preference number: 5 (lower is better)
Translates to: QCKGYNARVVSLCFSEGCGPPPH*SLIKIG
Trigger: CCCTATCTTAATGAGAGACAAGTGAGGTGGAGGGCC...ACATCCCTCTGAGAAGCACAAGGAGACGACACGCGCATTGTAACCTTTGCACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS GCA 90 bp GCGGAAGTTGGCTTTGTCCTGCAGTATCTCCAGCTGCTTTTCATCTaGCATCTGTGTGTCTGGTATCTCATACCTGTTGTTGAGCAGGGC +
Preference number: 5 (lower is better)
Translates to: AEVGFVLQYLQLLFI*HLCVWYLIPVVEQG
Trigger: GCCCTGCTCAACAACAGGTATGAGATACCAGACACACAGATGGCAGATGAAAAGCAGCTGGAGATACTGCAGGACAAAGCCAACTTCCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR CAA 90 bp TATGGTCAAGACTCCTTCCTTACCACAGACAAGAGGAAAGATCTGCCCCGGAGTCTAAAGCGGAACTCGTaGAGGTTGCACAGCGTGACA +
Preference number: 5 (lower is better)
Translates to: YGQDSFLTTDKRKDLPRSLKRNS*RLHSVT
Trigger: TGTCACGCTGTGCAACCTCAACGAGTTCCGCTTTAG...ACTCCGGGGCAGATCTTTCCTCTTGTCTGTGGTAAGGAAGGAGTCTTGACCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR CAA 90 bp GAGACAGTGCAAAGGTTACAATGCGCGTGTCGTCTCCTTGTGCTTCTCAGAGGGGTCATTCTTGGAGACTaGGCTAAAGCGGAACTCGTT +
Preference number: 5 (lower is better)
Translates to: ETVQRLQCACRLLVLLRGVILGD*AKAELV
Trigger: AACGAGTTCCGCTTTAGCCAAGTCTCCAAGAATGAC...CCCTCTGAGAAGCACAAGGAGACGACACGCGCATTGTAACCTTTGCACTGTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR CAA 90 bp GCAAAGGTTACAATGCGCGTGTCGTCTCCTTGTGCTTCTCAGAGGGATGTGTGTTTGAAGCTGCGGAAGTaGGCTTTGTCCTGCAGTATC +
Preference number: 5 (lower is better)
Translates to: AKVTMRVSSPCASQRDVCLKLRK*ALSCSI
Trigger: GATACTGCAGGACAAAGCCAACTTCCGCAGCTTCAA...ACACACATCCCTCTGAGAAGCACAAGGAGACGACACGCGCATTGTAACCTTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR CAA 90 bp ACTGAGACAGTGCAAAGGTTACAATGCGCGTGTCGTCTCCTTGTGCTTCTCAGACGCATGTTGAAGGGTTaGGGTTTGAAGCTGCGGAAG +
Preference number: 5 (lower is better)
Translates to: TETVQRLQCACRLLVLLRRMLKG*GLKLRK
Trigger: CTTCCGCAGCTTCAAACCCAAACCCTTCAACATGCG...TCTGAGAAGCACAAGGAGACGACACGCGCATTGTAACCTTTGCACTGTCTCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR CAA 90 bp CCAATGCAGCTGCTCACAGGTCCTGTTCTGGGATTGAAGACCAAGACACAGCTACTATGGATCTGCACTTaGATGCCTGCTTCGAAGGAC +
Preference number: 5 (lower is better)
Translates to: PMQLLTGPVLGLKTKTQLLWICT*MPASKD
Trigger: GTCCTTCGAAGCAGGCATCAAAGTGCAGATCCATAG...TAGCTGTGTCTTGGTCTTCAATCCCAGAACAGGACCTGTGAGCAGCTGCATTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR CAA 90 bp ATGCGCGTGTCGTCTCCTTGTGCTTCTCAGAGGGATGTGTGTACACAGTACAGACTATGGATCTGCACTTaGATGCCTGCTTCGAAGGAC +
Preference number: 5 (lower is better)
Translates to: MRVSSPCASQRDVCTQYRLWICT*MPASKD
Trigger: GTCCTTCGAAGCAGGCATCAAAGTGCAGATCCATAG...TCTGTACTGTGTACACACATCCCTCTGAGAAGCACAAGGAGACGACACGCGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CAA 90 bp TATGGTCAAGACTCCTTCCTTACCACAGACAAGAGGAAAGATCTGCCCCGGAGTTCCGCACTGCTCCTTTaGGCCTCCTTCTGGCATTTT +
Preference number: 5 (lower is better)
Translates to: YGQDSFLTTDKRKDLPRSSALLL*ASFWHF
Trigger: AAAATGCCAGAAGGAGGCCAAAAGGAGCAGTGCGGA...ACTCCGGGGCAGATCTTTCCTCTTGTCTGTGGTAAGGAAGGAGTCTTGACCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000453327.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CAA 90 bp ATGATCTCTGAGGAAACTCTTAGGAACCAAGAGATTCCAAAGATCCTACAGCCTCTGAGGGCCACGCCCTaGTCCGCACTGCTCCTTTTG +
Preference number: 5 (lower is better)
Translates to: MISEETLRNQEIPKILQPLRATP*SALLLL
Trigger: CAAAAGGAGCAGTGCGGACAAGGGCGTGGCCCTCAG...AGGCTGTAGGATCTTTGGAATCTCTTGGTTCCTAAGAGTTTCCTCAGAGATCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR CAA 90 bp ACTGAGACAGTGCAAAGGTTACAATGCGCGTGTCGTCTCCTTGTGCTTCTCAGAGGTACATTCTCTGGTTaGGGGCCAAATTCCAGACCC +
Preference number: 5 (lower is better)
Translates to: TETVQRLQCACRLLVLLRGTFSG*GPNSRP
Trigger: GGGTCTGGAATTTGGCCCCAAACCAGAGAATGTACC...TCTGAGAAGCACAAGGAGACGACACGCGCATTGTAACCTTTGCACTGTCTCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CAA 90 bp ACAGTACAGACACCAGGGGAGAGAGTCCAACTCTTTATACAGGCGAAGGCATTCGGTACATTCTCTGGTTaGGGGCCAAATTCCAGACCC +
Preference number: 5 (lower is better)
Translates to: TVQTPGERVQLFIQAKAFGTFSG*GPNSRP
Trigger: GGGTCTGGAATTTGGCCCCAAACCAGAGAATGTACC...GAATGCCTTCGCCTGTATAAAGAGTTGGACTCTCTCCCCTGGTGTCTGTACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CAA 90 bp AGGACTCTATGGTCAAGACTCCTTCCTTACCACAGACAAGAGGAAAGATCTGCCTTCCTGCCAGGAGACTaGGGTTTGGGGACAGTCACT +
Preference number: 5 (lower is better)
Translates to: RTLWSRLLPYHRQEERSAFLPGD*GLGTVT
Trigger: AGTGACTGTCCCCAAACCCAAGTCTCCTGGCAGGAA...GGCAGATCTTTCCTCTTGTCTGTGGTAAGGAAGGAGTCTTGACCATAGAGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CAA 90 bp AAGAATGGGATAGAGGCAGAGAGAGGACTCTATGGTCAAGACTCCTTCCTTACCCACCAGGGCCGCATCTaGTCCCCATTACCACTTCTT +
Preference number: 5 (lower is better)
Translates to: KNGIEAERGLYGQDSFLTHQGRI*SPLPLL
Trigger: AAGAAGTGGTAATGGGGACAAGATGCGGCCCTGGTG...GGTAAGGAAGGAGTCTTGACCATAGAGTCCTCTCTCTGCCTCTATCCCATTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CAA 90 bp ACTGAGACAGTGCAAAGGTTACAATGCGCGTGTCGTCTCCTTGTGCTTCTCAGAGATTCACAGCTTCCTTaGTCGCCACTGAGACAGTGC +
Preference number: 5 (lower is better)
Translates to: TETVQRLQCACRLLVLLRDSQLP*SPLRQC
Trigger: GCACTGTCTCAGTGGCGACAAAGGAAGCTGTGAATC...TCTGAGAAGCACAAGGAGACGACACGCGCATTGTAACCTTTGCACTGTCTCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CAA 90 bp TATGGTCAAGACTCCTTCCTTACCACAGACAAGAGGAAAGATCTGCCCCGGAGTGATTCACAGCTTCCTTaGTCGCCACTGAGACAGTGC +
Preference number: 5 (lower is better)
Translates to: YGQDSFLTTDKRKDLPRSDSQLP*SPLRQC
Trigger: GCACTGTCTCAGTGGCGACAAAGGAAGCTGTGAATC...ACTCCGGGGCAGATCTTTCCTCTTGTCTGTGGTAAGGAAGGAGTCTTGACCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CAA 90 bp GGTTACAATGCGCGTGTCGTCTCCTTGTGCTTCTCAGAGGGATGTGTGTACACAGGTCCTGTTCTGGGATaGAAGACCAAGACACAGCTA +
Preference number: 5 (lower is better)
Translates to: GYNARVVSLCFSEGCVYTGPVLG*KTKTQL
Trigger: TAGCTGTGTCTTGGTCTTCAATCCCAGAACAGGACC...TGTGTACACACATCCCTCTGAGAAGCACAAGGAGACGACACGCGCATTGTAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR CAA 90 bp GCAAAGGTTACAATGCGCGTGTCGTCTCCTTGTGCTTCTCAGAGGGATGTGTGTGGTCCTGTTCTGGGATaGAAGACCAAGACACAGCTA +
Preference number: 5 (lower is better)
Translates to: AKVTMRVSSPCASQRDVCGPVLG*KTKTQL
Trigger: TAGCTGTGTCTTGGTCTTCAATCCCAGAACAGGACC...ACACACATCCCTCTGAGAAGCACAAGGAGACGACACGCGCATTGTAACCTTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR CAA 90 bp ACTTATAGGTATCAGGATGTAGCCTACAGCACCAGGGCCGCATCTTGTCCCCATTCCAATGCACACTTTTaGGCCTCATTCCTGCTTCCC +
Preference number: 5 (lower is better)
Translates to: TYRYQDVAYSTRAASCPHSNAHF*ASFLLP
Trigger: GGGAAGCAGGAATGAGGCCAAAAAGTGTGCATTGGA...ATGGGGACAAGATGCGGCCCTGGTGCTGTAGGCTACATCCTGATACCTATAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR CAA 90 bp ATGCGCGTGTCGTCTCCTTGTGCTTCTCAGAGGGATGTGTGTACACAGTACAGATCCAATGCACACTTTTaGGCCTCATTCCTGCTTCCC +
Preference number: 5 (lower is better)
Translates to: MRVSSPCASQRDVCTQYRSNAHF*ASFLLP
Trigger: GGGAAGCAGGAATGAGGCCAAAAAGTGTGCATTGGA...TCTGTACTGTGTACACACATCCCTCTGAGAAGCACAAGGAGACGACACGCGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR CAA 90 bp TCCTTTGTCGCCACTGAGACAGTGCAAAGGTTACAATGCGCGTGTCGTCTCCTTGTCATTCTTGGAGACTaGGCTAAAGCGGAACTCGTT +
Preference number: 5 (lower is better)
Translates to: SFVATETVQRLQCACRLLVILGD*AKAELV
Trigger: AACGAGTTCCGCTTTAGCCAAGTCTCCAAGAATGAC...AAGGAGACGACACGCGCATTGTAACCTTTGCACTGTCTCAGTGGCGACAAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR CAA 90 bp AAAGGTTACAATGCGCGTGTCGTCTCCTTGTGCTTCTCAGAGGGATGTGTGTACTTGAAGGGTTTGGGTTaGAAGCTGCGGAAGTTGGCT +
Preference number: 5 (lower is better)
Translates to: KGYNARVVSLCFSEGCVYLKGLG*KLRKLA
Trigger: AGCCAACTTCCGCAGCTTCAAACCCAAACCCTTCAA...GTACACACATCCCTCTGAGAAGCACAAGGAGACGACACGCGCATTGTAACCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR CAA 90 bp ACTGAGACAGTGCAAAGGTTACAATGCGCGTGTCGTCTCCTTGTGCTTCTCAGATCCAATGCACACTTTTaGGCCTCATTCCTGCTTCCC +
Preference number: 5 (lower is better)
Translates to: TETVQRLQCACRLLVLLRSNAHF*ASFLLP
Trigger: GGGAAGCAGGAATGAGGCCAAAAAGTGTGCATTGGA...TCTGAGAAGCACAAGGAGACGACACGCGCATTGTAACCTTTGCACTGTCTCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR CAA 90 bp ATGAAGTTGGGGAAGAGGATGTGGGAGAGTTCCATAAGAAAATTTATGGACGTGTGGAGGGTGCAGCTGTaGGCAAAGGCCACCAAGTCC +
Preference number: 5 (lower is better)
Translates to: MKLGKRMWESSIRKFMDVWRVQL*AKATKS
Trigger: GGACTTGGTGGCCTTTGCCAACAGCTGCACCCTCCA...CACGTCCATAAATTTTCTTATGGAACTCTCCCACATCCTCTTCCCCAACTTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552438.5
CDS GCA 90 bp GGTTTGAAGCTGCGGAAGTTGGCTTTGTCCTGCAGTATCTCCAGCTaGTTTTCATCTGCCATCTGTGTGTCTGGTATCTCATACCTGTTG +
Preference number: 5 (lower is better)
Translates to: GLKLRKLALSCSISS*FSSAICVSGISYLL
Trigger: CAACAGGTATGAGATACCAGACACACAGATGGCAGATGAAAAGCAGCTGGAGATACTGCAGGACAAAGCCAACTTCCGCAGCTTCAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS GCA 90 bp ATGTTGAAGGGTTTGGGTTTGAAGCTGCGGAAGTTGGCTTTGTCCTaGAGTATCTCCAGCTGCTTTTCATCTGCCATCTGTGTGTCTGGT +
Preference number: 5 (lower is better)
Translates to: MLKGLGLKLRKLALS*SISSCFSSAICVSG
Trigger: ACCAGACACACAGATGGCAGATGAAAAGCAGCTGGAGATACTGCAGGACAAAGCCAACTTCCGCAGCTTCAAACCCAAACCCTTCAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR CAA 90 bp AGGACTCTATGGTCAAGACTCCTTCCTTACCACAGACAAGAGGAAAGATCTGCCCTATGGATCTGCACTTaGATGCCTGCTTCGAAGGAC +
Preference number: 5 (lower is better)
Translates to: RTLWSRLLPYHRQEERSALWICT*MPASKD
Trigger: GTCCTTCGAAGCAGGCATCAAAGTGCAGATCCATAG...GGCAGATCTTTCCTCTTGTCTGTGGTAAGGAAGGAGTCTTGACCATAGAGTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000453327.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CAA 90 bp GATTCCAAAGATCCTACAGCCTTACTCTCCAGCTCCAGGCCAATGCAGCTGCTCTATTGCTCAGATTTGTaGAACTTCTTGGCCAGGTAC +
Preference number: 5 (lower is better)
Translates to: DSKDPTALLSSSRPMQLLYCSDL*NFLARY
Trigger: GTACCTGGCCAAGAAGTTCAACAAATCTGAGCAATA...GAGCAGCTGCATTGGCCTGGAGCTGGAGAGTAAGGCTGTAGGATCTTTGGAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR CAA 90 bp GAAGCAAATGAAGTTGGGGAAGAGGATGTGGGAGAGTTCCATAAGAAAATTTATCTGAGGGCCACGCCCTaGTCCGCACTGCTCCTTTTG +
Preference number: 5 (lower is better)
Translates to: EANEVGEEDVGEFHKKIYLRATP*SALLLL
Trigger: CAAAAGGAGCAGTGCGGACAAGGGCGTGGCCCTCAG...ATAAATTTTCTTATGGAACTCTCCCACATCCTCTTCCCCAACTTCATTTGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CAA 90 bp AAGTTGGGGAAGAGGATGTGGGAGAGTTCCATAAGAAAATTTATGGACGTGGCCGGTACATTCTCTGGTTaGGGGCCAAATTCCAGACCC +
Preference number: 5 (lower is better)
Translates to: KLGKRMWESSIRKFMDVAGTFSG*GPNSRP
Trigger: GGGTCTGGAATTTGGCCCCAAACCAGAGAATGTACC...GGCCACGTCCATAAATTTTCTTATGGAACTCTCCCACATCCTCTTCCCCAACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CAA 90 bp ATGAAGTTGGGGAAGAGGATGTGGGAGAGTTCCATAAGAAAATTTATGGACGTGGCGCGTGTCGTCTCCTaGTGCTTCTCAGAGGGATGT +
Preference number: 5 (lower is better)
Translates to: MKLGKRMWESSIRKFMDVARVVS*CFSEGC
Trigger: ACATCCCTCTGAGAAGCACAAGGAGACGACACGCGC...CACGTCCATAAATTTTCTTATGGAACTCTCCCACATCCTCTTCCCCAACTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CAA 90 bp CTATGGTCAAGACTCCTTCCTTACCACAGACAAGAGGAAAGATCTGCCCCGGAGTATTGCTCAGATTTGTaGAACTTCTTGGCCAGGTAC +
Preference number: 5 (lower is better)
Translates to: LWSRLLPYHRQEERSAPEYCSDL*NFLARY
Trigger: GTACCTGGCCAAGAAGTTCAACAAATCTGAGCAATA...CTCCGGGGCAGATCTTTCCTCTTGTCTGTGGTAAGGAAGGAGTCTTGACCATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000453327.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CAA 90 bp GCTTCCTTTGTCGCCACTGAGACAGTGCAAAGGTTACAATGCGCGTGTCGTCTCGTTCTCCCCTATGTATaGCTCAGATTTGTTGAACTT +
Preference number: 5 (lower is better)
Translates to: ASFVATETVQRLQCACRLVLPYV*LRFVEL
Trigger: AAGTTCAACAAATCTGAGCAATACATAGGGGAGAAC...GAGACGACACGCGCATTGTAACCTTTGCACTGTCTCAGTGGCGACAAAGGAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CAA 90 bp ATGAAGTTGGGGAAGAGGATGTGGGAGAGTTCCATAAGAAAATTTATGGACGTGCACCAGGGCCGCATCTaGTCCCCATTACCACTTCTT +
Preference number: 5 (lower is better)
Translates to: MKLGKRMWESSIRKFMDVHQGRI*SPLPLL
Trigger: AAGAAGTGGTAATGGGGACAAGATGCGGCCCTGGTG...CACGTCCATAAATTTTCTTATGGAACTCTCCCACATCCTCTTCCCCAACTTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CAA 90 bp AAGTTGGGGAAGAGGATGTGGGAGAGTTCCATAAGAAAATTTATGGACGTGGCCGTCATTCTTGGAGACTaGGCTAAAGCGGAACTCGTT +
Preference number: 5 (lower is better)
Translates to: KLGKRMWESSIRKFMDVAVILGD*AKAELV
Trigger: AACGAGTTCCGCTTTAGCCAAGTCTCCAAGAATGAC...GGCCACGTCCATAAATTTTCTTATGGAACTCTCCCACATCCTCTTCCCCAACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR CAA 90 bp TATGGTCAAGACTCCTTCCTTACCACAGACAAGAGGAAAGATCTGCCCCGGAGTTATTGCTCAGATTTGTaGAACTTCTTGGCCAGGTAC +
Preference number: 5 (lower is better)
Translates to: YGQDSFLTTDKRKDLPRSYCSDL*NFLARY
Trigger: GTACCTGGCCAAGAAGTTCAACAAATCTGAGCAATA...ACTCCGGGGCAGATCTTTCCTCTTGTCTGTGGTAAGGAAGGAGTCTTGACCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000453327.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CAA 90 bp ACTGAGACAGTGCAAAGGTTACAATGCGCGTGTCGTCTCCTTGTGCTTCTCAGATATTGCTCAGATTTGTaGAACTTCTTGGCCAGGTAC +
Preference number: 5 (lower is better)
Translates to: TETVQRLQCACRLLVLLRYCSDL*NFLARY
Trigger: GTACCTGGCCAAGAAGTTCAACAAATCTGAGCAATA...TCTGAGAAGCACAAGGAGACGACACGCGCATTGTAACCTTTGCACTGTCTCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CAA 90 bp TTGTGCTTCTCAGAGGGATGTGTGTACACAGTACAGACACCAGGGGAGAGAGTCGTTCTCCCCTATGTATaGCTCAGATTTGTTGAACTT +
Preference number: 5 (lower is better)
Translates to: LCFSEGCVYTVQTPGERVVLPYV*LRFVEL
Trigger: AAGTTCAACAAATCTGAGCAATACATAGGGGAGAAC...GACTCTCTCCCCTGGTGTCTGTACTGTGTACACACATCCCTCTGAGAAGCACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CAA 90 bp CAGTGCAAAGGTTACAATGCGCGTGTCGTCTCCTTGTGCTTCTCAGAGGGATGTGTTCTCCCCTATGTATaGCTCAGATTTGTTGAACTT +
Preference number: 5 (lower is better)
Translates to: QCKGYNARVVSLCFSEGCVLPYV*LRFVEL
Trigger: AAGTTCAACAAATCTGAGCAATACATAGGGGAGAAC...ACATCCCTCTGAGAAGCACAAGGAGACGACACGCGCATTGTAACCTTTGCACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CAA 90 bp CATAAGAAAATTTATGGACGTGGCCCTCTACAAGGGCCTCCGGGAGAGGGACCAAAAATGCAGATGAGGTaGTTGAGAGAAGCAAATGAA +
Preference number: 5 (lower is better)
Translates to: HKKIYGRGPLQGPPGEGPKMQMR*LREANE
Trigger: TTCATTTGCTTCTCTCAACAACCTCATCTGCATTTT...TGGTCCCTCTCCCGGAGGCCCTTGTAGAGGGCCACGTCCATAAATTTTCTTATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CAA 90 bp AAGACTCCTTCCTTACCACAGACAAGAGGAAAGATCTGCCCCGGAGTGTGGGGAAAAATGCAGATGAGGTaGTTGAGAGAAGCAAATGAA +
Preference number: 5 (lower is better)
Translates to: KTPSLPQTRGKICPGVWGKMQMR*LREANE
Trigger: TTCATTTGCTTCTCTCAACAACCTCATCTGCATTTT...TCCCCACACTCCGGGGCAGATCTTTCCTCTTGTCTGTGGTAAGGAAGGAGTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CAA 90 bp AGGACTCTATGGTCAAGACTCCTTCCTTACCACAGACAAGAGGAAAGATCTGCCTATTGCTCAGATTTGTaGAACTTCTTGGCCAGGTAC +
Preference number: 5 (lower is better)
Translates to: RTLWSRLLPYHRQEERSAYCSDL*NFLARY
Trigger: GTACCTGGCCAAGAAGTTCAACAAATCTGAGCAATA...GGCAGATCTTTCCTCTTGTCTGTGGTAAGGAAGGAGTCTTGACCATAGAGTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000453327.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CAA 90 bp ACAGTACAGACACCAGGGGAGAGAGTCCAACTCTTTATACAGGCGAAGGCATTCGTTCTCCCCTATGTATaGCTCAGATTTGTTGAACTT +
Preference number: 5 (lower is better)
Translates to: TVQTPGERVQLFIQAKAFVLPYV*LRFVEL
Trigger: AAGTTCAACAAATCTGAGCAATACATAGGGGAGAAC...GAATGCCTTCGCCTGTATAAAGAGTTGGACTCTCTCCCCTGGTGTCTGTACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CAA 90 bp ATGATCTCTGAGGAAACTCTTAGGAACCAAGAGATTCCAAAGATCCTACAGCCTGAGAAGCAAATGAAGTaGGGGAAGAGGATGTGGGAG +
Preference number: 5 (lower is better)
Translates to: MISEETLRNQEIPKILQPEKQMK*GKRMWE
Trigger: CTCCCACATCCTCTTCCCCAACTTCATTTGCTTCTC...AGGCTGTAGGATCTTTGGAATCTCTTGGTTCCTAAGAGTTTCCTCAGAGATCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS-3UTR CAA 90 bp AGTGCAAAGGTTACAATGCGCGTGTCGTCTCCTTGTGCTTCTCAGAGGGATGTGAAAATGCAGATGAGGTaGTTGAGAGAAGCAAATGAA +
Preference number: 5 (lower is better)
Translates to: SAKVTMRVSSPCASQRDVKMQMR*LREANE
Trigger: TTCATTTGCTTCTCTCAACAACCTCATCTGCATTTT...CACATCCCTCTGAGAAGCACAAGGAGACGACACGCGCATTGTAACCTTTGCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CAA 90 bp AAGAATGGGATAGAGGCAGAGAGAGGACTCTATGGTCAAGACTCCTTCCTTACCGTTCTCCCCTATGTATaGCTCAGATTTGTTGAACTT +
Preference number: 5 (lower is better)
Translates to: KNGIEAERGLYGQDSFLTVLPYV*LRFVEL
Trigger: AAGTTCAACAAATCTGAGCAATACATAGGGGAGAAC...GGTAAGGAAGGAGTCTTGACCATAGAGTCCTCTCTCTGCCTCTATCCCATTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000453327.7
ENST00000550558.5
ENST00000552438.5
CDS-3UTR CAA 90 bp AGGACTCTATGGTCAAGACTCCTTCCTTACCACAGACAAGAGGAAAGATCTGCCAAAATGCAGATGAGGTaGTTGAGAGAAGCAAATGAA +
Preference number: 5 (lower is better)
Translates to: RTLWSRLLPYHRQEERSAKMQMR*LREANE
Trigger: TTCATTTGCTTCTCTCAACAACCTCATCTGCATTTT...GGCAGATCTTTCCTCTTGTCTGTGGTAAGGAAGGAGTCTTGACCATAGAGTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
ENST00000552438.5
CDS GCA 72 bp GCGCTGGCTCGCTGGCTCGCTCGCCTCGGCTCGGTCTaGCCGGGCTCGGCGCGGTGCGCGGTGCTCTCAGCC +
Preference number: 6 (lower is better)
Translates to: ALARWLARLGSV*PGSARCAVLSA
Trigger: GGCTGAGAGCACCGCGCACCGCGCCGAGCCCGGGCAGACCGAGCCGAGGCGAGCGAGCCAGCGAGCCAGCGC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228468.8
ENST00000447966.7
CDS GCA 72 bp CTCGGCGCGGTGCGCGGTGCTCTCAGCCCTGGGATCTaGAGGGATCCATCGTCCGGCCGGGAGGCGGCGGGA +
Preference number: 6 (lower is better)
Translates to: LGAVRGALSPGI*RDPSSGREAAG
Trigger: TCCCGCCGCCTCCCGGCCGGACGATGGATCCCTGCAGATCCCAGGGCTGAGAGCACCGCGCACCGCGCCGAG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228468.8
ENST00000447966.7
CDS GCA 72 bp TCGGCTCGGTCTGCCCGGGCTCGGCGCGGTGCGCGGTaGTCTCAGCCCTGGGATCTGCAGGGATCCATCGTC +
Preference number: 6 (lower is better)
Translates to: SARSARARRGAR*SQPWDLQGSIV
Trigger: GACGATGGATCCCTGCAGATCCCAGGGCTGAGAGCACCGCGCACCGCGCCGAGCCCGGGCAGACCGAGCCGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228468.8
ENST00000447966.7
CDS GCA 72 bp AGGAGAAGATGTGGGCCAGGCCGTGCAGTGTGGAGCTaGTGGCGAAGGCCTGGATGCTCACCGGCTGGACGC +
Preference number: 6 (lower is better)
Translates to: RRRCGPGRAVWS*WRRPGCSPAGR
Trigger: GCGTCCAGCCGGTGAGCATCCAGGCCTTCGCCAGCAGCTCCACACTGCACGGCCTGGCCCACATCTTCTCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS TCA 72 bp CCCTTCCCACCCATCCCTGGGGGTGCAGGCGGGAACTaGGGTCAGAGAGACATGAGCCAGGTGGGTGTGGGA +
Preference number: 6 (lower is better)
Translates to: PFPPIPGGAGGN*GQRDMSQVGVG
Trigger: TCCCACACCCACCTGGCTCATGTCTCTCTGACCTCAGTTCCCGCCTGCACCCCCAGGGATGGGTGGGAAGGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548350.1
CDS CCA 72 bp CCATCTGGCCCCCGATGTCACCAAGACAACAGGGTTTaGGGAAGGGCCTCTGGGGTGGAGGACCCTCATGGG +
Preference number: 6 (lower is better)
Translates to: PSGPRCHQDNRV*GRASGVEDPHG
Trigger: CCCATGAGGGTCCTCCACCCCAGAGGCCCTTCCCCAAACCCTGTTGTCTTGGTGACATCGGGGGCCAGATGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000228468.8
CDS TCA 72 bp AGGGAGGACTGGCAGGCCCCCATGCTGCCCCAGAAGTaGCCCACTCCAGGTCCATACCTTCTAGACCCTTCC +
Preference number: 6 (lower is better)
Translates to: REDWQAPMLPQK*PTPGPYLLDPS
Trigger: GGAAGGGTCTAGAAGGTATGGACCTGGAGTGGGTCACTTCTGGGGCAGCATGGGGGCCTGCCAGTCCTCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548350.1
CDS GCA 72 bp GGACAGCCGCACAGCATTAGTGTTGCAGAGGGTGACTaGCGGGAAGGCCAGCTCCGTGGTGGCCACTTCGTT +
Preference number: 6 (lower is better)
Translates to: GQPHSISVAEGD*REGQLRGGHFV
Trigger: AACGAAGTGGCCACCACGGAGCTGGCCTTCCCGGCAGTCACCCTCTGCAACACTAATGCTGTGCGGCTGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552438.5
CDS GCA 72 bp AGAAGATGGGAAGGGAGGACTGGCAGGCCCCCATGCTaGCCCAGAAGTGACCCACTCCAGGTCCATACCTTC +
Preference number: 6 (lower is better)
Translates to: RRWEGRTGRPPC*PRSDPLQVHTF
Trigger: GAAGGTATGGACCTGGAGTGGGTCACTTCTGGGGCAGCATGGGGGCCTGCCAGTCCTCCCTTCCCATCTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548350.1
CDS CAA 90 bp TCTGGGGTGGAGGACCCTCATGGGACAGAAGTGAGCACCCTGCTTTaGGATGATAGGGAGCCACGCCATGCCCATGGCATGAGAAGGGGA +
Preference number: 6 (lower is better)
Translates to: SGVEDPHGTEVSTLL*DDREPRHAHGMRRG
Trigger: TCCCCTTCTCATGCCATGGGCATGGCGTGGCTCCCTATCATCCAAAAGCAGGGTGCTCACTTCTGTCCCATGAGGGTCCTCCACCCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228468.8
ENST00000551199.1
CDS TCA 72 bp TTGAGGTTGCACAGCGTGACAGCAGGGAAGGTAAGCTaGGAGGCAGCCACCTCGTCGAGCTTGGTGACATGG +
Preference number: 6 (lower is better)
Translates to: LRLHSVTAGKVS*EAATSSSLVTW
Trigger: CCATGTCACCAAGCTCGACGAGGTGGCTGCCTCTCAGCTTACCTTCCCTGCTGTCACGCTGTGCAACCTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS CCA 72 bp ATGTCACCAAGACAACAGGGTTTGGGGAAGGGCCTCTaGGGTGGAGGACCCTCATGGGACAGAAGTGAGCAC +
Preference number: 6 (lower is better)
Translates to: MSPRQQGLGKGL*GGGPSWDRSEH
Trigger: GTGCTCACTTCTGTCCCATGAGGGTCCTCCACCCCAGAGGCCCTTCCCCAAACCCTGTTGTCTTGGTGACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228468.8
CDS CCA 72 bp GATGGTGGTAGTACCAAAGGCCTAGAAGGTGTAAGCTaGGAGAAGATGGGAAGGGAGGACTGGCAGGCCCCC +
Preference number: 6 (lower is better)
Translates to: DGGSTKGLEGVS*EKMGREDWQAP
Trigger: GGGGGCCTGCCAGTCCTCCCTTCCCATCTTCTCCCAGCTTACACCTTCTAGGCCTTTGGTACTACCACCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548350.1
CDS TCA 72 bp TCCTCCTCTTCCGATTCTGAGATGTCCTGCTGCTGCTaGTGGTGGTGGGGACCCCAAATATCTCCCAAGGGC +
Preference number: 6 (lower is better)
Translates to: SSSSDSEMSCCC*WWWGPQISPKG
Trigger: GCCCTTGGGAGATATTTGGGGTCCCCACCACCATCAGCAGCAGCAGGACATCTCAGAATCGGAAGAGGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552438.5
CDS TCA 72 bp CCCCTCTGTAGCTCTAGTAGTGCCTTAGGCCCTCCATaGTTACAGATCCTGCCAGGGCTCCCTACAGAGCAC +
Preference number: 6 (lower is better)
Translates to: PLCSSSSALGPP*LQILPGLPTEH
Trigger: GTGCTCTGTAGGGAGCCCTGGCAGGATCTGTAATCATGGAGGGCCTAAGGCACTACTAGAGCTACAGAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549792.1
CDS TCA 72 bp TGCCCTGGAAAACTGTTCCTGGTAGGGTGCATCGCCTaGGCTCCTTTGCCACCTGCATGGGCTTCTAGTTGG +
Preference number: 6 (lower is better)
Translates to: CPGKLFLVGCIA*APLPPAWASSW
Trigger: CCAACTAGAAGCCCATGCAGGTGGCAAAGGAGCTCAGGCGATGCACCCTACCAGGAACAGTTTTCCAGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549792.1
CDS TCA 72 bp TGGCCACTTCGTTTAGAAGGGTCACGTGTGGGTAGCTaGGGTAATAAGCAACGCGGTCCCCTACCTGGCACA +
Preference number: 6 (lower is better)
Translates to: WPLRLEGSRVGS*GNKQRGPLPGT
Trigger: TGTGCCAGGTAGGGGACCGCGTTGCTTATTACCTCAGCTACCCACACGTGACCCTTCTAAACGAAGTGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552438.5
CDS TCA 72 bp GCTCCTTTGCCACCTGCATGGGCTTCTAGTTGGGGTTaGCAGTTGGGAGGTATTGGTAATGGCTCAGAAGGC +
Preference number: 6 (lower is better)
Translates to: APLPPAWASSWG*QLGGIGNGSEG
Trigger: GCCTTCTGAGCCATTACCAATACCTCCCAACTGTCAACCCCAACTAGAAGCCCATGCAGGTGGCAAAGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549792.1
CDS CCA 72 bp TGCCACCTGCATGGGCTTCTAGTTGGGGTTGACAGTTaGGAGGTATTGGTAATGGCTCAGAAGGCAGGAGGA +
Preference number: 6 (lower is better)
Translates to: CHLHGLLVGVDS*EVLVMAQKAGG
Trigger: TCCTCCTGCCTTCTGAGCCATTACCAATACCTCCCAACTGTCAACCCCAACTAGAAGCCCATGCAGGTGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549792.1
CDS CAA 72 bp AGGTCATTCTTGGAGACTTGGCTAAAGCGGAACTCGTaGAGGTTGCACAGCGTGACAGCAGGGAAGGTAAGC +
Preference number: 6 (lower is better)
Translates to: RSFLETWLKRNS*RLHSVTAGKVS
Trigger: GCTTACCTTCCCTGCTGTCACGCTGTGCAACCTCAACGAGTTCCGCTTTAGCCAAGTCTCCAAGAATGACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS CAA 90 bp TCACGCATGTTGAAGGGTTTGGGTTTGAAGCTGCGGAAGTTGGCTTaGTCCTGCAGTATCTCCAGCTGCTTTTCATCTGCCATCTGTGTG +
Preference number: 6 (lower is better)
Translates to: SRMLKGLGLKLRKLA*SCSISSCFSSAICV
Trigger: CACACAGATGGCAGATGAAAAGCAGCTGGAGATACTGCAGGACAAAGCCAACTTCCGCAGCTTCAAACCCAAACCCTTCAACATGCGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS GCA 72 bp CTGCGGAAGTTGGCTTTGTCCTGCAGTATCTCCAGCTaGTTTTCATCTGCCATCTGTGTGTCTGGTATCTCA +
Preference number: 6 (lower is better)
Translates to: LRKLALSCSISS*FSSAICVSGIS
Trigger: TGAGATACCAGACACACAGATGGCAGATGAAAAGCAGCTGGAGATACTGCAGGACAAAGCCAACTTCCGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5
CDS CAA 72 bp CGCATGTTGAAGGGTTTGGGTTTGAAGCTGCGGAAGTaGGCTTTGTCCTGCAGTATCTCCAGCTGCTTTTCA +
Preference number: 6 (lower is better)
Translates to: RMLKGLGLKLRK*ALSCSISSCFS
Trigger: TGAAAAGCAGCTGGAGATACTGCAGGACAAAGCCAACTTCCGCAGCTTCAAACCCAAACCCTTCAACATGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228468.8
ENST00000447966.7
ENST00000550558.5