RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ASH2L (Homo sapiens)

Ensembl gene IDs: ENSG00000129691

Ensembl transcript IDs: ENST00000343823.11, ENST00000428278.6, ENST00000517496.5, ENST00000517719.5, ENST00000518186.1, ENST00000520079.1, ENST00000521652.5, ENST00000545394.2

Found 186 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GTGCTGCTTACATTTCTGAACACTGTCACCAAGAGGCACCCAATCTaGAGGGAAGCAAAGTGTCACATAAACTTCAAAACAAGTTTTATT +
Preference number: 1 (lower is better)
Translates to: VLLTFLNTVTKRHPI*REAKCHINFKTSFI
Trigger: AATAAAACTTGTTTTGAAGTTTATGTGACACTTTGCTTCCCTTCAGATTGGGTGCCTCTTGGTGACAGTGTTCAGAAATGTAAGCAGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343823.11
ENST00000545394.2
3UTR-3UTR TCA 90 bp GGAAACCACCCGCACATATATCAACATCCATGTTCCAAGGGAAGACCGGGAGGGGTGGGGAGAAAATGGTaGAAGGCAGGCAGTCTCCCG +
Preference number: 2 (lower is better)
Translates to: GNHPHIYQHPCSKGRPGGVGRKW*KAGSLP
Trigger: CGGGAGACTGCCTGCCTTTCACCATTTTCTCCCCAC...CCCTCCCGGTCTTCCCTTGGAACATGGATGTTGATATATGTGCGGGTGGTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000343823.11
ENST00000545394.2
3UTR-3UTR TCA 90 bp GACAGGAAACCACCCGCACATATATCAACATCCATGTTCCAAGGGAAGACCGGGAGGAAAGGGGGTGGCTaGTTGGCAAGAATGGGAGCA +
Preference number: 2 (lower is better)
Translates to: DRKPPAHISTSMFQGKTGRKGGG*LARMGA
Trigger: TGCTCCCATTCTTGCCAATCAGCCACCCCCTTTCCT...CCCGGTCTTCCCTTGGAACATGGATGTTGATATATGTGCGGGTGGTTTCCTGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343823.11
ENST00000545394.2
3UTR-3UTR CCA 90 bp TCCTCTCCTCAAGGTGGCAGATTTTCACAGGAAAGGGGGTGGCTGATTGGCAAGGGGCTTATGCAATCCTaGAGTCAGCGGTTGTTGGCT +
Preference number: 2 (lower is better)
Translates to: SSPQGGRFSQERGWLIGKGLMQS*SQRLLA
Trigger: AGCCAACAACCGCTGACTCCAGGATTGCATAAGCCC...CTTGCCAATCAGCCACCCCCTTTCCTGTGAAAATCTGCCACCTTGAGGAGAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000343823.11
ENST00000545394.2
3UTR-3UTR TCA 90 bp TCCTCTCCTCAAGGTGGCAGATTTTCACAGGAAAGGGGGTGGCTGATTGGCAAGAAGAGGCACCCAATCTaGAGGGAAGCAAAGTGTCAC +
Preference number: 2 (lower is better)
Translates to: SSPQGGRFSQERGWLIGKKRHPI*REAKCH
Trigger: GTGACACTTTGCTTCCCTTCAGATTGGGTGCCTCTT...CTTGCCAATCAGCCACCCCCTTTCCTGTGAAAATCTGCCACCTTGAGGAGAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343823.11
ENST00000545394.2
3UTR-3UTR GCA 90 bp TTCCTCTCCTCAAGGTGGCAGATTTTCACAGGAAAGGGGGTGGCTGATTGGCAATTCACAGGGGGCTTATaGAATCCTGGAGTCAGCGGT +
Preference number: 2 (lower is better)
Translates to: FLSSRWQIFTGKGVADWQFTGGL*NPGVSG
Trigger: ACCGCTGACTCCAGGATTGCATAAGCCCCCTGTGAA...TTGCCAATCAGCCACCCCCTTTCCTGTGAAAATCTGCCACCTTGAGGAGAGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000343823.11
ENST00000545394.2
3UTR-3UTR GCA 90 bp GACAGGAAACCACCCGCACATATATCAACATCCATGTTCCAAGGGAAGACCGGGTTCACAGGGGGCTTATaGAATCCTGGAGTCAGCGGT +
Preference number: 2 (lower is better)
Translates to: DRKPPAHISTSMFQGKTGFTGGL*NPGVSG
Trigger: ACCGCTGACTCCAGGATTGCATAAGCCCCCTGTGAA...CCCGGTCTTCCCTTGGAACATGGATGTTGATATATGTGCGGGTGGTTTCCTGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343823.11
ENST00000545394.2
3UTR-3UTR CCA 90 bp TTCCTCTCCTCAAGGTGGCAGATTTTCACAGGAAAGGGGGTGGCTGATTGGCAAGGGCTTATGCAATCCTaGAGTCAGCGGTTGTTGGCT +
Preference number: 2 (lower is better)
Translates to: FLSSRWQIFTGKGVADWQGLMQS*SQRLLA
Trigger: AGCCAACAACCGCTGACTCCAGGATTGCATAAGCCC...TTGCCAATCAGCCACCCCCTTTCCTGTGAAAATCTGCCACCTTGAGGAGAGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343823.11
ENST00000545394.2
3UTR-3UTR TCA 90 bp TTCCTCTCCTCAAGGTGGCAGATTTTCACAGGAAAGGGGGTGGCTGATTGGCAATTCCCAGAAAGTCCTTaGCAGAAAAGAGGGACCTGG +
Preference number: 2 (lower is better)
Translates to: FLSSRWQIFTGKGVADWQFPESP*QKRGTW
Trigger: CCAGGTCCCTCTTTTCTGTCAAGGACTTTCTGGGAA...TTGCCAATCAGCCACCCCCTTTCCTGTGAAAATCTGCCACCTTGAGGAGAGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000343823.11
ENST00000545394.2
3UTR-3UTR TCA 90 bp TTCCTCTCCTCAAGGTGGCAGATTTTCACAGGAAAGGGGGTGGCTGATTGGCAAAAGAGGCACCCAATCTaGAGGGAAGCAAAGTGTCAC +
Preference number: 2 (lower is better)
Translates to: FLSSRWQIFTGKGVADWQKRHPI*REAKCH
Trigger: GTGACACTTTGCTTCCCTTCAGATTGGGTGCCTCTT...TTGCCAATCAGCCACCCCCTTTCCTGTGAAAATCTGCCACCTTGAGGAGAGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000343823.11
ENST00000545394.2
3UTR-3UTR CCA 90 bp TCCTCTCCTCAAGGTGGCAGATTTTCACAGGAAAGGGGGTGGCTGATTGGCAAGTCCTTGGAAAACAGGTaGGATACAGTCAATGCCCAC +
Preference number: 2 (lower is better)
Translates to: SSPQGGRFSQERGWLIGKSLENR*DTVNAH
Trigger: GTGGGCATTGACTGTATCCCACCTGTTTTCCAAGGA...CTTGCCAATCAGCCACCCCCTTTCCTGTGAAAATCTGCCACCTTGAGGAGAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000343823.11
ENST00000545394.2
3UTR-3UTR TCA 90 bp AATATACCGATAGCCATCTTTGTTAAACGGGTGTTCCAATGGGTAGCCATGAGGGTGGGGAGAAAATGGTaGAAGGCAGGCAGTCTCCCG +
Preference number: 2 (lower is better)
Translates to: NIPIAIFVKRVFQWVAMRVGRKW*KAGSLP
Trigger: CGGGAGACTGCCTGCCTTTCACCATTTTCTCCCCAC...CCTCATGGCTACCCATTGGAACACCCGTTTAACAAAGATGGCTATCGGTATATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517496.5
3UTR-3UTR TCA 90 bp TTCCTCTCCTCAAGGTGGCAGATTTTCACAGGAAAGGGGGTGGCTGATTGGCAATGCTGCTTACATTTCTaGACACTGTCACCAAGAGGC +
Preference number: 2 (lower is better)
Translates to: FLSSRWQIFTGKGVADWQCCLHF*TLSPRG
Trigger: GCCTCTTGGTGACAGTGTTCAGAAATGTAAGCAGCA...TTGCCAATCAGCCACCCCCTTTCCTGTGAAAATCTGCCACCTTGAGGAGAGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343823.11
ENST00000545394.2
3UTR-3UTR CCA 90 bp AATATACCGATAGCCATCTTTGTTAAACGGGTGTTCCAATGGGTAGCCATGAGGCCTGCTGTTTGCGCTTaGCTCCTCGTCCTTTTCCGC +
Preference number: 2 (lower is better)
Translates to: NIPIAIFVKRVFQWVAMRPAVCA*LLVLFR
Trigger: GCGGAAAAGGACGAGGAGCCAAGCGCAAACAGCAGG...CCTCATGGCTACCCATTGGAACACCCGTTTAACAAAGATGGCTATCGGTATATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517496.5
3UTR-3UTR TCA 90 bp AAGATAAGCAAGACAGGAAACCACCCGCACATATATCAACATCCATGTTCCAAGGTGGGGAGAAAATGGTaGAAGGCAGGCAGTCTCCCG +
Preference number: 2 (lower is better)
Translates to: KISKTGNHPHIYQHPCSKVGRKW*KAGSLP
Trigger: CGGGAGACTGCCTGCCTTTCACCATTTTCTCCCCAC...CTTGGAACATGGATGTTGATATATGTGCGGGTGGTTTCCTGTCTTGCTTATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343823.11
ENST00000545394.2
3UTR-3UTR GCA 90 bp AATATACCGATAGCCATCTTTGTTAAACGGGTGTTCCAATGGGTAGCCATGAGGCTCGTCCTTTTCCGCTaGTTCCTGCTGCAATTCCCC +
Preference number: 2 (lower is better)
Translates to: NIPIAIFVKRVFQWVAMRLVLFR*FLLQFP
Trigger: GGGGAATTGCAGCAGGAAGCAGCGGAAAAGGACGAG...CCTCATGGCTACCCATTGGAACACCCGTTTAACAAAGATGGCTATCGGTATATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517496.5
3UTR-3UTR GCA 90 bp AATATACCGATAGCCATCTTTGTTAAACGGGTGTTCCAATGGGTAGCCATGAGGCTCCATCCTGCTGTTTaGGCTTGGCTCCTCGTCCTT +
Preference number: 2 (lower is better)
Translates to: NIPIAIFVKRVFQWVAMRLHPAV*AWLLVL
Trigger: AAGGACGAGGAGCCAAGCGCAAACAGCAGGATGGAG...CCTCATGGCTACCCATTGGAACACCCGTTTAACAAAGATGGCTATCGGTATATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517496.5
3UTR-3UTR CCA 90 bp GGAAACCACCCGCACATATATCAACATCCATGTTCCAAGGGAAGACCGGGAGGGAATAAGAGCAGTCACTaGAAGTGGGGAGAAAATGGT +
Preference number: 2 (lower is better)
Translates to: GNHPHIYQHPCSKGRPGGNKSSH*KWGENG
Trigger: ACCATTTTCTCCCCACTTCCAGTGACTGCTCTTATT...CCCTCCCGGTCTTCCCTTGGAACATGGATGTTGATATATGTGCGGGTGGTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343823.11
ENST00000545394.2
3UTR-3UTR CCA 90 bp GGAAACCACCCGCACATATATCAACATCCATGTTCCAAGGGAAGACCGGGAGGGAGGTTACCATTTCCTTaGAAAACAGGTGGGATACAG +
Preference number: 2 (lower is better)
Translates to: GNHPHIYQHPCSKGRPGGRLPFP*KTGGIQ
Trigger: CTGTATCCCACCTGTTTTCCAAGGAAATGGTAACCT...CCCTCCCGGTCTTCCCTTGGAACATGGATGTTGATATATGTGCGGGTGGTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343823.11
ENST00000545394.2
3UTR-3UTR TCA 90 bp AAGATAAGCAAGACAGGAAACCACCCGCACATATATCAACATCCATGTTCCAAGAGGAAAGGGGGTGGCTaGTTGGCAAGAATGGGAGCA +
Preference number: 2 (lower is better)
Translates to: KISKTGNHPHIYQHPCSKRKGGG*LARMGA
Trigger: TGCTCCCATTCTTGCCAATCAGCCACCCCCTTTCCT...CTTGGAACATGGATGTTGATATATGTGCGGGTGGTTTCCTGTCTTGCTTATCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343823.11
ENST00000545394.2
3UTR-3UTR GCA 90 bp AATATACCGATAGCCATCTTTGTTAAACGGGTGTTCCAATGGGTAGCCATGAGGTTCACAGGGGGCTTATaGAATCCTGGAGTCAGCGGT +
Preference number: 2 (lower is better)
Translates to: NIPIAIFVKRVFQWVAMRFTGGL*NPGVSG
Trigger: ACCGCTGACTCCAGGATTGCATAAGCCCCCTGTGAA...CCTCATGGCTACCCATTGGAACACCCGTTTAACAAAGATGGCTATCGGTATATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517496.5
3UTR-3UTR GCA 90 bp AATATACCGATAGCCATCTTTGTTAAACGGGTGTTCCAATGGGTAGCCATGAGGTCCTGTGTTCGGGACTaGCATGTCAGGTTGGCCAAA +
Preference number: 2 (lower is better)
Translates to: NIPIAIFVKRVFQWVAMRSCVRD*HVRLAK
Trigger: TTTGGCCAACCTGACATGGCAGTCCCGAACACAGGA...CCTCATGGCTACCCATTGGAACACCCGTTTAACAAAGATGGCTATCGGTATATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517496.5
3UTR-3UTR CCA 90 bp GACAGGAAACCACCCGCACATATATCAACATCCATGTTCCAAGGGAAGACCGGGAATAAGAGCAGTCACTaGAAGTGGGGAGAAAATGGT +
Preference number: 2 (lower is better)
Translates to: DRKPPAHISTSMFQGKTGNKSSH*KWGENG
Trigger: ACCATTTTCTCCCCACTTCCAGTGACTGCTCTTATT...CCCGGTCTTCCCTTGGAACATGGATGTTGATATATGTGCGGGTGGTTTCCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343823.11
ENST00000545394.2
3UTR-3UTR CCA 90 bp AATATACCGATAGCCATCTTTGTTAAACGGGTGTTCCAATGGGTAGCCATGAGGGGGCTTATGCAATCCTaGAGTCAGCGGTTGTTGGCT +
Preference number: 2 (lower is better)
Translates to: NIPIAIFVKRVFQWVAMRGLMQS*SQRLLA
Trigger: AGCCAACAACCGCTGACTCCAGGATTGCATAAGCCC...CCTCATGGCTACCCATTGGAACACCCGTTTAACAAAGATGGCTATCGGTATATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517496.5
3UTR-3UTR TCA 90 bp AATATACCGATAGCCATCTTTGTTAAACGGGTGTTCCAATGGGTAGCCATGAGGTTCCCAGAAAGTCCTTaGCAGAAAAGAGGGACCTGG +
Preference number: 2 (lower is better)
Translates to: NIPIAIFVKRVFQWVAMRFPESP*QKRGTW
Trigger: CCAGGTCCCTCTTTTCTGTCAAGGACTTTCTGGGAA...CCTCATGGCTACCCATTGGAACACCCGTTTAACAAAGATGGCTATCGGTATATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517496.5
3UTR-3UTR CCA 90 bp AAGGAAGATAAGCAAGACAGGAAACCACCCGCACATATATCAACATCCATGTTCTCACAGGAAAGGGGGTaGCTGATTGGCAAGAATGGG +
Preference number: 2 (lower is better)
Translates to: KEDKQDRKPPAHISTSMFSQERG*LIGKNG
Trigger: CCCATTCTTGCCAATCAGCCACCCCCTTTCCTGTGA...GAACATGGATGTTGATATATGTGCGGGTGGTTTCCTGTCTTGCTTATCTTCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343823.11
ENST00000545394.2
3UTR-3UTR GCA 90 bp AATATACCGATAGCCATCTTTGTTAAACGGGTGTTCCAATGGGTAGCCATGAGGCTTCTGGATCTTTACTaGCTGGATCTGGGTGTTCCT +
Preference number: 2 (lower is better)
Translates to: NIPIAIFVKRVFQWVAMRLLDLY*LDLGVP
Trigger: AGGAACACCCAGATCCAGGCAGTAAAGATCCAGAAG...CCTCATGGCTACCCATTGGAACACCCGTTTAACAAAGATGGCTATCGGTATATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517496.5
3UTR-3UTR CCA 90 bp AATATACCGATAGCCATCTTTGTTAAACGGGTGTTCCAATGGGTAGCCATGAGGTCCTTGGAAAACAGGTaGGATACAGTCAATGCCCAC +
Preference number: 2 (lower is better)
Translates to: NIPIAIFVKRVFQWVAMRSLENR*DTVNAH
Trigger: GTGGGCATTGACTGTATCCCACCTGTTTTCCAAGGA...CCTCATGGCTACCCATTGGAACACCCGTTTAACAAAGATGGCTATCGGTATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517496.5
3UTR-3UTR TCA 90 bp AAGGAAGATAAGCAAGACAGGAAACCACCCGCACATATATCAACATCCATGTTCTGCTGCTTACATTTCTaGACACTGTCACCAAGAGGC +
Preference number: 2 (lower is better)
Translates to: KEDKQDRKPPAHISTSMFCCLHF*TLSPRG
Trigger: GCCTCTTGGTGACAGTGTTCAGAAATGTAAGCAGCA...GAACATGGATGTTGATATATGTGCGGGTGGTTTCCTGTCTTGCTTATCTTCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343823.11
ENST00000545394.2
3UTR-3UTR GCA 90 bp AATATACCGATAGCCATCTTTGTTAAACGGGTGTTCCAATGGGTAGCCATGAGGGTGGGATACAGTCAATaGCCACAGAAGGAAATGTCT +
Preference number: 2 (lower is better)
Translates to: NIPIAIFVKRVFQWVAMRVGYSQ*PQKEMS
Trigger: AGACATTTCCTTCTGTGGGCATTGACTGTATCCCAC...CCTCATGGCTACCCATTGGAACACCCGTTTAACAAAGATGGCTATCGGTATATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517496.5
3UTR-3UTR CCA 90 bp AAGATAAGCAAGACAGGAAACCACCCGCACATATATCAACATCCATGTTCCAAGTCCTTGGAAAACAGGTaGGATACAGTCAATGCCCAC +
Preference number: 2 (lower is better)
Translates to: KISKTGNHPHIYQHPCSKSLENR*DTVNAH
Trigger: GTGGGCATTGACTGTATCCCACCTGTTTTCCAAGGA...CTTGGAACATGGATGTTGATATATGTGCGGGTGGTTTCCTGTCTTGCTTATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343823.11
ENST00000545394.2
3UTR-3UTR GCA 90 bp AAGGAAGATAAGCAAGACAGGAAACCACCCGCACATATATCAACATCCATGTTCGTGGGATACAGTCAATaGCCACAGAAGGAAATGTCT +
Preference number: 2 (lower is better)
Translates to: KEDKQDRKPPAHISTSMFVGYSQ*PQKEMS
Trigger: AGACATTTCCTTCTGTGGGCATTGACTGTATCCCAC...GAACATGGATGTTGATATATGTGCGGGTGGTTTCCTGTCTTGCTTATCTTCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343823.11
ENST00000545394.2
3UTR-3UTR CCA 90 bp AATATACCGATAGCCATCTTTGTTAAACGGGTGTTCCAATGGGTAGCCATGAGGAATAAGAGCAGTCACTaGAAGTGGGGAGAAAATGGT +
Preference number: 2 (lower is better)
Translates to: NIPIAIFVKRVFQWVAMRNKSSH*KWGENG
Trigger: ACCATTTTCTCCCCACTTCCAGTGACTGCTCTTATT...CCTCATGGCTACCCATTGGAACACCCGTTTAACAAAGATGGCTATCGGTATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517496.5
3UTR-3UTR CCA 90 bp AATATACCGATAGCCATCTTTGTTAAACGGGTGTTCCAATGGGTAGCCATGAGGGGAGTCAGCGGTTGTTaGCTTATGGTACACAAAATA +
Preference number: 2 (lower is better)
Translates to: NIPIAIFVKRVFQWVAMRGVSGC*LMVHKI
Trigger: TATTTTGTGTACCATAAGCCAACAACCGCTGACTCC...CCTCATGGCTACCCATTGGAACACCCGTTTAACAAAGATGGCTATCGGTATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517496.5
3UTR-3UTR CCA 90 bp AATATACCGATAGCCATCTTTGTTAAACGGGTGTTCCAATGGGTAGCCATGAGGAGGTTACCATTTCCTTaGAAAACAGGTGGGATACAG +
Preference number: 2 (lower is better)
Translates to: NIPIAIFVKRVFQWVAMRRLPFP*KTGGIQ
Trigger: CTGTATCCCACCTGTTTTCCAAGGAAATGGTAACCT...CCTCATGGCTACCCATTGGAACACCCGTTTAACAAAGATGGCTATCGGTATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517496.5
3UTR-3UTR CCA 90 bp AAGATAAGCAAGACAGGAAACCACCCGCACATATATCAACATCCATGTTCCAAGGGAGTCAGCGGTTGTTaGCTTATGGTACACAAAATA +
Preference number: 2 (lower is better)
Translates to: KISKTGNHPHIYQHPCSKGVSGC*LMVHKI
Trigger: TATTTTGTGTACCATAAGCCAACAACCGCTGACTCC...CTTGGAACATGGATGTTGATATATGTGCGGGTGGTTTCCTGTCTTGCTTATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343823.11
ENST00000545394.2
3UTR-3UTR CCA 90 bp AAGGAAGATAAGCAAGACAGGAAACCACCCGCACATATATCAACATCCATGTTCAGGTTACCATTTCCTTaGAAAACAGGTGGGATACAG +
Preference number: 2 (lower is better)
Translates to: KEDKQDRKPPAHISTSMFRLPFP*KTGGIQ
Trigger: CTGTATCCCACCTGTTTTCCAAGGAAATGGTAACCT...GAACATGGATGTTGATATATGTGCGGGTGGTTTCCTGTCTTGCTTATCTTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343823.11
ENST00000545394.2
3UTR TCA 72 bp CAGTGCCAGCTCCCTTCCTCGTGCTGCTTACATTTCTaGACACTGTCACCAAGAGGCACCCAATCTGAAGGG +
Preference number: 3 (lower is better)
Translates to: QCQLPSSCCLHF*TLSPRGTQSEG
Trigger: CCCTTCAGATTGGGTGCCTCTTGGTGACAGTGTTCAGAAATGTAAGCAGCACGAGGAAGGGAGCTGGCACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343823.11
ENST00000545394.2
3UTR-3UTR CAA 90 bp GGAAACCACCCGCACATATATCAACATCCATGTTCCAAGGGAAGACCGGGAGGGTCCTGGAGTCAGCGGTaGTTGGCTTATGGTACACAA +
Preference number: 3 (lower is better)
Translates to: GNHPHIYQHPCSKGRPGGSWSQR*LAYGTQ
Trigger: TTGTGTACCATAAGCCAACAACCGCTGACTCCAGGA...CCCTCCCGGTCTTCCCTTGGAACATGGATGTTGATATATGTGCGGGTGGTTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343823.11
ENST00000545394.2
3UTR TCA 72 bp CTCAAGGTGGCAGATTTTCACAGGAAAGGGGGTGGCTaGTTGGCAAGAATGGGAGCAATAGGAAAGCAGCCA +
Preference number: 3 (lower is better)
Translates to: LKVADFHRKGGG*LARMGAIGKQP
Trigger: TGGCTGCTTTCCTATTGCTCCCATTCTTGCCAATCAGCCACCCCCTTTCCTGTGAAAATCTGCCACCTTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343823.11
ENST00000545394.2
3UTR-3UTR CAA 90 bp GACAGGAAACCACCCGCACATATATCAACATCCATGTTCCAAGGGAAGACCGGGATTCCCAGAAAGTCCTaGACAGAAAAGAGGGACCTG +
Preference number: 3 (lower is better)
Translates to: DRKPPAHISTSMFQGKTGIPRKS*TEKRDL
Trigger: CAGGTCCCTCTTTTCTGTCAAGGACTTTCTGGGAAT...CCCGGTCTTCCCTTGGAACATGGATGTTGATATATGTGCGGGTGGTTTCCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343823.11
ENST00000545394.2
3UTR-3UTR CAA 90 bp AATATACCGATAGCCATCTTTGTTAAACGGGTGTTCCAATGGGTAGCCATGAGGTCCTGCTGTTTGCGCTaGGCTCCTCGTCCTTTTCCG +
Preference number: 3 (lower is better)
Translates to: NIPIAIFVKRVFQWVAMRSCCLR*APRPFP
Trigger: CGGAAAAGGACGAGGAGCCAAGCGCAAACAGCAGGA...CCTCATGGCTACCCATTGGAACACCCGTTTAACAAAGATGGCTATCGGTATATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517496.5
3UTR CCA 72 bp TCTCCTCAAGGTGGCAGATTTTCACAGGAAAGGGGGTaGCTGATTGGCAAGAATGGGAGCAATAGGAAAGCA +
Preference number: 3 (lower is better)
Translates to: SPQGGRFSQERG*LIGKNGSNRKA
Trigger: TGCTTTCCTATTGCTCCCATTCTTGCCAATCAGCCACCCCCTTTCCTGTGAAAATCTGCCACCTTGAGGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343823.11
ENST00000545394.2
3UTR-3UTR CAA 90 bp GACAGGAAACCACCCGCACATATATCAACATCCATGTTCCAAGGGAAGACCGGGTGGAGTCAGCGGTTGTaGGCTTATGGTACACAAAAT +
Preference number: 3 (lower is better)
Translates to: DRKPPAHISTSMFQGKTGWSQRL*AYGTQN
Trigger: ATTTTGTGTACCATAAGCCAACAACCGCTGACTCCA...CCCGGTCTTCCCTTGGAACATGGATGTTGATATATGTGCGGGTGGTTTCCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343823.11
ENST00000545394.2
3UTR-3UTR CAA 90 bp AATATACCGATAGCCATCTTTGTTAAACGGGTGTTCCAATGGGTAGCCATGAGGTCCTGGAGTCAGCGGTaGTTGGCTTATGGTACACAA +
Preference number: 3 (lower is better)
Translates to: NIPIAIFVKRVFQWVAMRSWSQR*LAYGTQ
Trigger: TTGTGTACCATAAGCCAACAACCGCTGACTCCAGGA...CCTCATGGCTACCCATTGGAACACCCGTTTAACAAAGATGGCTATCGGTATATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517496.5
3UTR-3UTR CAA 90 bp AATATACCGATAGCCATCTTTGTTAAACGGGTGTTCCAATGGGTAGCCATGAGGATTCCCAGAAAGTCCTaGACAGAAAAGAGGGACCTG +
Preference number: 3 (lower is better)
Translates to: NIPIAIFVKRVFQWVAMRIPRKS*TEKRDL
Trigger: CAGGTCCCTCTTTTCTGTCAAGGACTTTCTGGGAAT...CCTCATGGCTACCCATTGGAACACCCGTTTAACAAAGATGGCTATCGGTATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517496.5
3UTR-3UTR CAA 90 bp AAGGAAGATAAGCAAGACAGGAAACCACCCGCACATATATCAACATCCATGTTCTCCTGGAGTCAGCGGTaGTTGGCTTATGGTACACAA +
Preference number: 3 (lower is better)
Translates to: KEDKQDRKPPAHISTSMFSWSQR*LAYGTQ
Trigger: TTGTGTACCATAAGCCAACAACCGCTGACTCCAGGA...GAACATGGATGTTGATATATGTGCGGGTGGTTTCCTGTCTTGCTTATCTTCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343823.11
ENST00000545394.2
3UTR-3UTR CAA 90 bp AATATACCGATAGCCATCTTTGTTAAACGGGTGTTCCAATGGGTAGCCATGAGGAGCACTGCTCTGTTTTaGGTTGTCATAAGCAGGACC +
Preference number: 3 (lower is better)
Translates to: NIPIAIFVKRVFQWVAMRSTALF*VVISRT
Trigger: GGTCCTGCTTATGACAACCAAAAACAGAGCAGTGCT...CCTCATGGCTACCCATTGGAACACCCGTTTAACAAAGATGGCTATCGGTATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517496.5
3UTR-3UTR CAA 90 bp AAGATAAGCAAGACAGGAAACCACCCGCACATATATCAACATCCATGTTCCAAGATTCCCAGAAAGTCCTaGACAGAAAAGAGGGACCTG +
Preference number: 3 (lower is better)
Translates to: KISKTGNHPHIYQHPCSKIPRKS*TEKRDL
Trigger: CAGGTCCCTCTTTTCTGTCAAGGACTTTCTGGGAAT...CTTGGAACATGGATGTTGATATATGTGCGGGTGGTTTCCTGTCTTGCTTATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343823.11
ENST00000545394.2
3UTR-3UTR CAA 90 bp AATATACCGATAGCCATCTTTGTTAAACGGGTGTTCCAATGGGTAGCCATGAGGTGGAGTCAGCGGTTGTaGGCTTATGGTACACAAAAT +
Preference number: 3 (lower is better)
Translates to: NIPIAIFVKRVFQWVAMRWSQRL*AYGTQN
Trigger: ATTTTGTGTACCATAAGCCAACAACCGCTGACTCCA...CCTCATGGCTACCCATTGGAACACCCGTTTAACAAAGATGGCTATCGGTATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517496.5
3UTR-3UTR CAA 90 bp AATATACCGATAGCCATCTTTGTTAAACGGGTGTTCCAATGGGTAGCCATGAGGCAGGTTACCATTTCCTaGGAAAACAGGTGGGATACA +
Preference number: 3 (lower is better)
Translates to: NIPIAIFVKRVFQWVAMRQVTIS*ENRWDT
Trigger: TGTATCCCACCTGTTTTCCAAGGAAATGGTAACCTG...CCTCATGGCTACCCATTGGAACACCCGTTTAACAAAGATGGCTATCGGTATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517496.5
3UTR-3UTR CAA 90 bp AAGATAAGCAAGACAGGAAACCACCCGCACATATATCAACATCCATGTTCCAAGAGCCCTTTTAAACTCTaGTTCCTCTCCTCAAGGTGG +
Preference number: 3 (lower is better)
Translates to: KISKTGNHPHIYQHPCSKSPFKL*FLSSRW
Trigger: CCACCTTGAGGAGAGGAACAAGAGTTTAAAAGGGCT...CTTGGAACATGGATGTTGATATATGTGCGGGTGGTTTCCTGTCTTGCTTATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343823.11
ENST00000545394.2
3UTR-3UTR CAA 90 bp AAGGAAGATAAGCAAGACAGGAAACCACCCGCACATATATCAACATCCATGTTCCAGGTTACCATTTCCTaGGAAAACAGGTGGGATACA +
Preference number: 3 (lower is better)
Translates to: KEDKQDRKPPAHISTSMFQVTIS*ENRWDT
Trigger: TGTATCCCACCTGTTTTCCAAGGAAATGGTAACCTG...GAACATGGATGTTGATATATGTGCGGGTGGTTTCCTGTCTTGCTTATCTTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343823.11
ENST00000545394.2
3UTR-3UTR CAA 90 bp AAGATAAGCAAGACAGGAAACCACCCGCACATATATCAACATCCATGTTCCAAGCAGGTTACCATTTCCTaGGAAAACAGGTGGGATACA +
Preference number: 3 (lower is better)
Translates to: KISKTGNHPHIYQHPCSKQVTIS*ENRWDT
Trigger: TGTATCCCACCTGTTTTCCAAGGAAATGGTAACCTG...CTTGGAACATGGATGTTGATATATGTGCGGGTGGTTTCCTGTCTTGCTTATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343823.11
ENST00000545394.2
3UTR TCA 72 bp ACATTTCTGAACACTGTCACCAAGAGGCACCCAATCTaGAGGGAAGCAAAGTGTCACATAAACTTCAAAACA +
Preference number: 3 (lower is better)
Translates to: TFLNTVTKRHPI*REAKCHINFKT
Trigger: TGTTTTGAAGTTTATGTGACACTTTGCTTCCCTTCAGATTGGGTGCCTCTTGGTGACAGTGTTCAGAAATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343823.11
ENST00000545394.2
CDS-3UTR GCA 90 bp GGAAACCACCCGCACATATATCAACATCCATGTTCCAAGGGAAGACCGGGAGGGGCCAGGTCCTGCTCCTaGCGCCGCCATCACGGCCAC +
Preference number: 4 (lower is better)
Translates to: GNHPHIYQHPCSKGRPGGARSCS*RRHHGH
Trigger: GTGGCCGTGATGGCGGCGGCAGGAGCAGGACCTGGC...CCCTCCCGGTCTTCCCTTGGAACATGGATGTTGATATATGTGCGGGTGGTTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343823.11
ENST00000545394.2
CDS-3UTR CCA 90 bp GGAAACCACCCGCACATATATCAACATCCATGTTCCAAGGGAAGACCGGGAGGGATTTGCGACCGCTCCTaGGCCAGGCCCGGCACCCGC +
Preference number: 4 (lower is better)
Translates to: GNHPHIYQHPCSKGRPGGICDRS*ARPGTR
Trigger: GCGGGTGCCGGGCCTGGCCCAGGAGCGGTCGCAAAT...CCCTCCCGGTCTTCCCTTGGAACATGGATGTTGATATATGTGCGGGTGGTTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343823.11
ENST00000545394.2
CDS-3UTR GCA 90 bp GACAGGAAACCACCCGCACATATATCAACATCCATGTTCCAAGGGAAGACCGGGGCCAGGTCCTGCTCCTaGCGCCGCCATCACGGCCAC +
Preference number: 4 (lower is better)
Translates to: DRKPPAHISTSMFQGKTGARSCS*RRHHGH
Trigger: GTGGCCGTGATGGCGGCGGCAGGAGCAGGACCTGGC...CCCGGTCTTCCCTTGGAACATGGATGTTGATATATGTGCGGGTGGTTTCCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343823.11
ENST00000545394.2
CDS-3UTR GCA 90 bp TCCTCTCCTCAAGGTGGCAGATTTTCACAGGAAAGGGGGTGGCTGATTGGCAAGTTCCTGGCCAGGTCCTaGTCCTGCCGCCGCCATCAC +
Preference number: 4 (lower is better)
Translates to: SSPQGGRFSQERGWLIGKFLARS*SCRRHH
Trigger: GTGATGGCGGCGGCAGGAGCAGGACCTGGCCAGGAA...CTTGCCAATCAGCCACCCCCTTTCCTGTGAAAATCTGCCACCTTGAGGAGAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343823.11
ENST00000545394.2
CDS-3UTR GCA 90 bp TTCCTCTCCTCAAGGTGGCAGATTTTCACAGGAAAGGGGGTGGCTGATTGGCAATCCAGGAGGAGCGGCTaGTCCCGCTGCCACCGGCTT +
Preference number: 4 (lower is better)
Translates to: FLSSRWQIFTGKGVADWQSRRSG*SRCHRL
Trigger: AAGCCGGTGGCAGCGGGAGCAGCCGCTCCTCCTGGA...TTGCCAATCAGCCACCCCCTTTCCTGTGAAAATCTGCCACCTTGAGGAGAGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343823.11
ENST00000545394.2
CDS-3UTR GCA 90 bp TCCTCTCCTCAAGGTGGCAGATTTTCACAGGAAAGGGGGTGGCTGATTGGCAAGACGTCAGCCAGGGTGTaGTCTACCACGGCGCCCCAG +
Preference number: 4 (lower is better)
Translates to: SSPQGGRFSQERGWLIGKTSARV*STTAPQ
Trigger: CTGGGGCGCCGTGGTAGAGCACACCCTGGCTGACGT...CTTGCCAATCAGCCACCCCCTTTCCTGTGAAAATCTGCCACCTTGAGGAGAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000343823.11
ENST00000545394.2
CDS-3UTR GCA 90 bp GACAGGAAACCACCCGCACATATATCAACATCCATGTTCCAAGGGAAGACCGGGTTCCTGGCCAGGTCCTaGTCCTGCCGCCGCCATCAC +
Preference number: 4 (lower is better)
Translates to: DRKPPAHISTSMFQGKTGFLARS*SCRRHH
Trigger: GTGATGGCGGCGGCAGGAGCAGGACCTGGCCAGGAA...CCCGGTCTTCCCTTGGAACATGGATGTTGATATATGTGCGGGTGGTTTCCTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343823.11
ENST00000545394.2
CDS-3UTR GCA 90 bp GACAGGAAACCACCCGCACATATATCAACATCCATGTTCCAAGGGAAGACCGGGACGTCAGCCAGGGTGTaGTCTACCACGGCGCCCCAG +
Preference number: 4 (lower is better)
Translates to: DRKPPAHISTSMFQGKTGTSARV*STTAPQ
Trigger: CTGGGGCGCCGTGGTAGAGCACACCCTGGCTGACGT...CCCGGTCTTCCCTTGGAACATGGATGTTGATATATGTGCGGGTGGTTTCCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343823.11
ENST00000545394.2
CDS-3UTR CCA 90 bp GGAAACCACCCGCACATATATCAACATCCATGTTCCAAGGGAAGACCGGGAGGGCAGCCTCCCCGGAACTaGGCTCAACTGTCGGAGCAG +
Preference number: 4 (lower is better)
Translates to: GNHPHIYQHPCSKGRPGGQPPRN*AQLSEQ
Trigger: CTGCTCCGACAGTTGAGCCCAGTTCCGGGGAGGCTG...CCCTCCCGGTCTTCCCTTGGAACATGGATGTTGATATATGTGCGGGTGGTTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343823.11
ENST00000545394.2
CDS-3UTR CCA 90 bp AATATACCGATAGCCATCTTTGTTAAACGGGTGTTCCAATGGGTAGCCATGAGGATTTGCGACCGCTCCTaGGCCAGGCCCGGCACCCGC +
Preference number: 4 (lower is better)
Translates to: NIPIAIFVKRVFQWVAMRICDRS*ARPGTR
Trigger: GCGGGTGCCGGGCCTGGCCCAGGAGCGGTCGCAAAT...CCTCATGGCTACCCATTGGAACACCCGTTTAACAAAGATGGCTATCGGTATATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517496.5
CDS-3UTR TCA 90 bp GACAGGAAACCACCCGCACATATATCAACATCCATGTTCCAAGGGAAGACCGGGGTGGGGAGAAAATGGTaGAAGGCAGGCAGTCTCCCG +
Preference number: 4 (lower is better)
Translates to: DRKPPAHISTSMFQGKTGVGRKW*KAGSLP
Trigger: CGGGAGACTGCCTGCCTTTCACCATTTTCTCCCCAC...CCCGGTCTTCCCTTGGAACATGGATGTTGATATATGTGCGGGTGGTTTCCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000343823.11
ENST00000545394.2
CDS-3UTR TCA 90 bp CTCTTGTTCCTCTCCTCAAGGTGGCAGATTTTCACAGGAAAGGGGGTGGCTGATGTGGGGAGAAAATGGTaGAAGGCAGGCAGTCTCCCG +
Preference number: 4 (lower is better)
Translates to: LLFLSSRWQIFTGKGVADVGRKW*KAGSLP
Trigger: CGGGAGACTGCCTGCCTTTCACCATTTTCTCCCCAC...ATCAGCCACCCCCTTTCCTGTGAAAATCTGCCACCTTGAGGAGAGGAACAAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000343823.11
ENST00000545394.2
CDS-3UTR TCA 90 bp TCCTCTCCTCAAGGTGGCAGATTTTCACAGGAAAGGGGGTGGCTGATTGGCAAGAGGAAAGGGGGTGGCTaGTTGGCAAGAATGGGAGCA +
Preference number: 4 (lower is better)
Translates to: SSPQGGRFSQERGWLIGKRKGGG*LARMGA
Trigger: TGCTCCCATTCTTGCCAATCAGCCACCCCCTTTCCT...CTTGCCAATCAGCCACCCCCTTTCCTGTGAAAATCTGCCACCTTGAGGAGAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000343823.11
ENST00000545394.2
CDS-3UTR GCA 90 bp CTCTTGTTCCTCTCCTCAAGGTGGCAGATTTTCACAGGAAAGGGGGTGGCTGATCTCTTCTGCCCCTGTTaGATTTGCGACCGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: LLFLSSRWQIFTGKGVADLFCPC*ICDRSW
Trigger: CCAGGAGCGGTCGCAAATGCAACAGGGGCAGAAGAG...ATCAGCCACCCCCTTTCCTGTGAAAATCTGCCACCTTGAGGAGAGGAACAAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000343823.11
ENST00000545394.2
CDS-3UTR GCA 90 bp AATATACCGATAGCCATCTTTGTTAAACGGGTGTTCCAATGGGTAGCCATGAGGTCCAGGAGGAGCGGCTaGTCCCGCTGCCACCGGCTT +
Preference number: 4 (lower is better)
Translates to: NIPIAIFVKRVFQWVAMRSRRSG*SRCHRL
Trigger: AAGCCGGTGGCAGCGGGAGCAGCCGCTCCTCCTGGA...CCTCATGGCTACCCATTGGAACACCCGTTTAACAAAGATGGCTATCGGTATATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517496.5
CDS-3UTR GCA 90 bp TCCTCTCCTCAAGGTGGCAGATTTTCACAGGAAAGGGGGTGGCTGATTGGCAAGCTCGTCCTTTTCCGCTaGTTCCTGCTGCAATTCCCC +
Preference number: 4 (lower is better)
Translates to: SSPQGGRFSQERGWLIGKLVLFR*FLLQFP
Trigger: GGGGAATTGCAGCAGGAAGCAGCGGAAAAGGACGAG...CTTGCCAATCAGCCACCCCCTTTCCTGTGAAAATCTGCCACCTTGAGGAGAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000343823.11
ENST00000545394.2
CDS-3UTR CCA 90 bp AAGGAAGATAAGCAAGACAGGAAACCACCCGCACATATATCAACATCCATGTTCATTTGCGACCGCTCCTaGGCCAGGCCCGGCACCCGC +
Preference number: 4 (lower is better)
Translates to: KEDKQDRKPPAHISTSMFICDRS*ARPGTR
Trigger: GCGGGTGCCGGGCCTGGCCCAGGAGCGGTCGCAAAT...GAACATGGATGTTGATATATGTGCGGGTGGTTTCCTGTCTTGCTTATCTTCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343823.11
ENST00000545394.2
CDS-3UTR CCA 90 bp GACAGGAAACCACCCGCACATATATCAACATCCATGTTCCAAGGGAAGACCGGGCCTGCTGTTTGCGCTTaGCTCCTCGTCCTTTTCCGC +
Preference number: 4 (lower is better)
Translates to: DRKPPAHISTSMFQGKTGPAVCA*LLVLFR
Trigger: GCGGAAAAGGACGAGGAGCCAAGCGCAAACAGCAGG...CCCGGTCTTCCCTTGGAACATGGATGTTGATATATGTGCGGGTGGTTTCCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343823.11
ENST00000545394.2
CDS-3UTR CCA 90 bp TTCCTCTCCTCAAGGTGGCAGATTTTCACAGGAAAGGGGGTGGCTGATTGGCAACCTGCTGTTTGCGCTTaGCTCCTCGTCCTTTTCCGC +
Preference number: 4 (lower is better)
Translates to: FLSSRWQIFTGKGVADWQPAVCA*LLVLFR
Trigger: GCGGAAAAGGACGAGGAGCCAAGCGCAAACAGCAGG...TTGCCAATCAGCCACCCCCTTTCCTGTGAAAATCTGCCACCTTGAGGAGAGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000343823.11
ENST00000545394.2
CDS-3UTR TCA 90 bp GACAGGAAACCACCCGCACATATATCAACATCCATGTTCCAAGGGAAGACCGGGCCTTTCCGTACTCCATaGGAGGCCCTCACCATAGAG +
Preference number: 4 (lower is better)
Translates to: DRKPPAHISTSMFQGKTGPFRTP*EALTIE
Trigger: CTCTATGGTGAGGGCCTCTCATGGAGTACGGAAAGG...CCCGGTCTTCCCTTGGAACATGGATGTTGATATATGTGCGGGTGGTTTCCTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343823.11
ENST00000545394.2
CDS-3UTR TCA 90 bp CTCTTGTTCCTCTCCTCAAGGTGGCAGATTTTCACAGGAAAGGGGGTGGCTGATAGGAAAGGGGGTGGCTaGTTGGCAAGAATGGGAGCA +
Preference number: 4 (lower is better)
Translates to: LLFLSSRWQIFTGKGVADRKGGG*LARMGA
Trigger: TGCTCCCATTCTTGCCAATCAGCCACCCCCTTTCCT...ATCAGCCACCCCCTTTCCTGTGAAAATCTGCCACCTTGAGGAGAGGAACAAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000343823.11
ENST00000545394.2
CDS-3UTR GCA 90 bp AAGATAAGCAAGACAGGAAACCACCCGCACATATATCAACATCCATGTTCCAAGTCCAGGAGGAGCGGCTaGTCCCGCTGCCACCGGCTT +
Preference number: 4 (lower is better)
Translates to: KISKTGNHPHIYQHPCSKSRRSG*SRCHRL
Trigger: AAGCCGGTGGCAGCGGGAGCAGCCGCTCCTCCTGGA...CTTGGAACATGGATGTTGATATATGTGCGGGTGGTTTCCTGTCTTGCTTATCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343823.11
ENST00000545394.2
CDS-3UTR GCA 90 bp GACAGGAAACCACCCGCACATATATCAACATCCATGTTCCAAGGGAAGACCGGGCTCGTCCTTTTCCGCTaGTTCCTGCTGCAATTCCCC +
Preference number: 4 (lower is better)
Translates to: DRKPPAHISTSMFQGKTGLVLFR*FLLQFP
Trigger: GGGGAATTGCAGCAGGAAGCAGCGGAAAAGGACGAG...CCCGGTCTTCCCTTGGAACATGGATGTTGATATATGTGCGGGTGGTTTCCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343823.11
ENST00000545394.2
CDS-3UTR GCA 90 bp CTCTTGTTCCTCTCCTCAAGGTGGCAGATTTTCACAGGAAAGGGGGTGGCTGATCTCCATCCTGCTGTTTaGGCTTGGCTCCTCGTCCTT +
Preference number: 4 (lower is better)
Translates to: LLFLSSRWQIFTGKGVADLHPAV*AWLLVL
Trigger: AAGGACGAGGAGCCAAGCGCAAACAGCAGGATGGAG...ATCAGCCACCCCCTTTCCTGTGAAAATCTGCCACCTTGAGGAGAGGAACAAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343823.11
ENST00000545394.2
CDS-3UTR GCA 90 bp TTCCTCTCCTCAAGGTGGCAGATTTTCACAGGAAAGGGGGTGGCTGATTGGCAACTCCATCCTGCTGTTTaGGCTTGGCTCCTCGTCCTT +
Preference number: 4 (lower is better)
Translates to: FLSSRWQIFTGKGVADWQLHPAV*AWLLVL
Trigger: AAGGACGAGGAGCCAAGCGCAAACAGCAGGATGGAG...TTGCCAATCAGCCACCCCCTTTCCTGTGAAAATCTGCCACCTTGAGGAGAGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343823.11
ENST00000545394.2
CDS-3UTR GCA 90 bp AATATACCGATAGCCATCTTTGTTAAACGGGTGTTCCAATGGGTAGCCATGAGGACGTCAGCCAGGGTGTaGTCTACCACGGCGCCCCAG +
Preference number: 4 (lower is better)
Translates to: NIPIAIFVKRVFQWVAMRTSARV*STTAPQ
Trigger: CTGGGGCGCCGTGGTAGAGCACACCCTGGCTGACGT...CCTCATGGCTACCCATTGGAACACCCGTTTAACAAAGATGGCTATCGGTATATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517496.5
CDS-3UTR GCA 90 bp TCCTCTCCTCAAGGTGGCAGATTTTCACAGGAAAGGGGGTGGCTGATTGGCAAGTTCACAGGGGGCTTATaGAATCCTGGAGTCAGCGGT +
Preference number: 4 (lower is better)
Translates to: SSPQGGRFSQERGWLIGKFTGGL*NPGVSG
Trigger: ACCGCTGACTCCAGGATTGCATAAGCCCCCTGTGAA...CTTGCCAATCAGCCACCCCCTTTCCTGTGAAAATCTGCCACCTTGAGGAGAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000343823.11
ENST00000545394.2
CDS-3UTR CCA 90 bp TCCTCTCCTCAAGGTGGCAGATTTTCACAGGAAAGGGGGTGGCTGATTGGCAAGTCACAGGAAAGGGGGTaGCTGATTGGCAAGAATGGG +
Preference number: 4 (lower is better)
Translates to: SSPQGGRFSQERGWLIGKSQERG*LIGKNG
Trigger: CCCATTCTTGCCAATCAGCCACCCCCTTTCCTGTGA...CTTGCCAATCAGCCACCCCCTTTCCTGTGAAAATCTGCCACCTTGAGGAGAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000343823.11
ENST00000545394.2
CDS-3UTR CCA 90 bp TTCCTCTCCTCAAGGTGGCAGATTTTCACAGGAAAGGGGGTGGCTGATTGGCAACATCACGGCCACCCCTaGACTTCTCGCGAGAATACT +
Preference number: 4 (lower is better)
Translates to: FLSSRWQIFTGKGVADWQHHGHP*TSRENT
Trigger: AGTATTCTCGCGAGAAGTCCAGGGGTGGCCGTGATG...TTGCCAATCAGCCACCCCCTTTCCTGTGAAAATCTGCCACCTTGAGGAGAGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000545394.2
CDS-3UTR TCA 90 bp TCCTCTCCTCAAGGTGGCAGATTTTCACAGGAAAGGGGGTGGCTGATTGGCAAGGCAGCTCTTGTACAGTaGGATGGCTGGGAAGTAAAC +
Preference number: 4 (lower is better)
Translates to: SSPQGGRFSQERGWLIGKAALVQ*DGWEVN
Trigger: GTTTACTTCCCAGCCATCTCACTGTACAAGAGCTGC...CTTGCCAATCAGCCACCCCCTTTCCTGTGAAAATCTGCCACCTTGAGGAGAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343823.11
ENST00000545394.2
CDS-3UTR GCA 90 bp GACAGGAAACCACCCGCACATATATCAACATCCATGTTCCAAGGGAAGACCGGGTCCTGTGTTCGGGACTaGCATGTCAGGTTGGCCAAA +
Preference number: 4 (lower is better)
Translates to: DRKPPAHISTSMFQGKTGSCVRD*HVRLAK
Trigger: TTTGGCCAACCTGACATGGCAGTCCCGAACACAGGA...CCCGGTCTTCCCTTGGAACATGGATGTTGATATATGTGCGGGTGGTTTCCTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343823.11
ENST00000545394.2
CDS-3UTR CCA 90 bp AATATACCGATAGCCATCTTTGTTAAACGGGTGTTCCAATGGGTAGCCATGAGGCAGCCTCCCCGGAACTaGGCTCAACTGTCGGAGCAG +
Preference number: 4 (lower is better)
Translates to: NIPIAIFVKRVFQWVAMRQPPRN*AQLSEQ
Trigger: CTGCTCCGACAGTTGAGCCCAGTTCCGGGGAGGCTG...CCTCATGGCTACCCATTGGAACACCCGTTTAACAAAGATGGCTATCGGTATATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517496.5
CDS-3UTR CCA 90 bp TTCCTCTCCTCAAGGTGGCAGATTTTCACAGGAAAGGGGGTGGCTGATTGGCAATCACAGGAAAGGGGGTaGCTGATTGGCAAGAATGGG +
Preference number: 4 (lower is better)
Translates to: FLSSRWQIFTGKGVADWQSQERG*LIGKNG
Trigger: CCCATTCTTGCCAATCAGCCACCCCCTTTCCTGTGA...TTGCCAATCAGCCACCCCCTTTCCTGTGAAAATCTGCCACCTTGAGGAGAGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000343823.11
ENST00000545394.2
CDS-3UTR TCA 90 bp GACAGGAAACCACCCGCACATATATCAACATCCATGTTCCAAGGGAAGACCGGGAGTATCCATCACCTCTaGTGTATCCCCAGCACCTTC +
Preference number: 4 (lower is better)
Translates to: DRKPPAHISTSMFQGKTGSIHHL*CIPSTF
Trigger: GAAGGTGCTGGGGATACATCAGAGGTGATGGATACT...CCCGGTCTTCCCTTGGAACATGGATGTTGATATATGTGCGGGTGGTTTCCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343823.11
CDS-3UTR TCA 90 bp GACAGGAAACCACCCGCACATATATCAACATCCATGTTCCAAGGGAAGACCGGGTTCCCAGAAAGTCCTTaGCAGAAAAGAGGGACCTGG +
Preference number: 4 (lower is better)
Translates to: DRKPPAHISTSMFQGKTGFPESP*QKRGTW
Trigger: CCAGGTCCCTCTTTTCTGTCAAGGACTTTCTGGGAA...CCCGGTCTTCCCTTGGAACATGGATGTTGATATATGTGCGGGTGGTTTCCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343823.11
ENST00000545394.2
CDS-3UTR TCA 90 bp GACAGGAAACCACCCGCACATATATCAACATCCATGTTCCAAGGGAAGACCGGGAAGAGGCACCCAATCTaGAGGGAAGCAAAGTGTCAC +
Preference number: 4 (lower is better)
Translates to: DRKPPAHISTSMFQGKTGKRHPI*REAKCH
Trigger: GTGACACTTTGCTTCCCTTCAGATTGGGTGCCTCTT...CCCGGTCTTCCCTTGGAACATGGATGTTGATATATGTGCGGGTGGTTTCCTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343823.11
ENST00000545394.2
CDS-3UTR TCA 90 bp GGAAACCACCCGCACATATATCAACATCCATGTTCCAAGGGAAGACCGGGAGGGTGCTGCTTACATTTCTaGACACTGTCACCAAGAGGC +
Preference number: 4 (lower is better)
Translates to: GNHPHIYQHPCSKGRPGGCCLHF*TLSPRG
Trigger: GCCTCTTGGTGACAGTGTTCAGAAATGTAAGCAGCA...CCCTCCCGGTCTTCCCTTGGAACATGGATGTTGATATATGTGCGGGTGGTTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343823.11
ENST00000545394.2
CDS-3UTR TCA 90 bp TCCTCTCCTCAAGGTGGCAGATTTTCACAGGAAAGGGGGTGGCTGATTGGCAAGTGCTGCTTACATTTCTaGACACTGTCACCAAGAGGC +
Preference number: 4 (lower is better)
Translates to: SSPQGGRFSQERGWLIGKCCLHF*TLSPRG
Trigger: GCCTCTTGGTGACAGTGTTCAGAAATGTAAGCAGCA...CTTGCCAATCAGCCACCCCCTTTCCTGTGAAAATCTGCCACCTTGAGGAGAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343823.11
ENST00000545394.2
CDS-3UTR GCA 90 bp AAGATAAGCAAGACAGGAAACCACCCGCACATATATCAACATCCATGTTCCAAGTGCCCCTGTTGCATTTaGGACCGCTCCTGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: KISKTGNHPHIYQHPCSKCPCCI*DRSWAR
Trigger: CCTGGCCCAGGAGCGGTCGCAAATGCAACAGGGGCA...CTTGGAACATGGATGTTGATATATGTGCGGGTGGTTTCCTGTCTTGCTTATCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343823.11
ENST00000545394.2
CDS-3UTR GCA 90 bp AATATACCGATAGCCATCTTTGTTAAACGGGTGTTCCAATGGGTAGCCATGAGGGTTCCCATGGGGGACTaGGCCTCCCATCCACTTCTG +
Preference number: 4 (lower is better)
Translates to: NIPIAIFVKRVFQWVAMRVPMGD*ASHPLL
Trigger: CAGAAGTGGATGGGAGGCGCAGTCCCCCATGGGAAC...CCTCATGGCTACCCATTGGAACACCCGTTTAACAAAGATGGCTATCGGTATATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517496.5
CDS-3UTR TCA 90 bp TCCTCTCCTCAAGGTGGCAGATTTTCACAGGAAAGGGGGTGGCTGATTGGCAAGGCATCTCATCCACAGTaGTTTCAAAATACCAGGCAC +
Preference number: 4 (lower is better)
Translates to: SSPQGGRFSQERGWLIGKASHPQ*FQNTRH
Trigger: GTGCCTGGTATTTTGAAATCACTGTGGATGAGATGC...CTTGCCAATCAGCCACCCCCTTTCCTGTGAAAATCTGCCACCTTGAGGAGAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000343823.11
ENST00000545394.2
CDS-3UTR GCA 90 bp AATATACCGATAGCCATCTTTGTTAAACGGGTGTTCCAATGGGTAGCCATGAGGCTCTTCTGCCCCTGTTaGATTTGCGACCGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: NIPIAIFVKRVFQWVAMRLFCPC*ICDRSW
Trigger: CCAGGAGCGGTCGCAAATGCAACAGGGGCAGAAGAG...CCTCATGGCTACCCATTGGAACACCCGTTTAACAAAGATGGCTATCGGTATATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517496.5
CDS-3UTR GCA 90 bp CTCTTGTTCCTCTCCTCAAGGTGGCAGATTTTCACAGGAAAGGGGGTGGCTGATGTACAAATCCCACATTaGAGCTCTACCTCACCCAAC +
Preference number: 4 (lower is better)
Translates to: LLFLSSRWQIFTGKGVADVQIPH*SSTSPN
Trigger: GTTGGGTGAGGTAGAGCTGCAATGTGGGATTTGTAC...ATCAGCCACCCCCTTTCCTGTGAAAATCTGCCACCTTGAGGAGAGGAACAAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343823.11
CDS-3UTR GCA 90 bp TTCCTCTCCTCAAGGTGGCAGATTTTCACAGGAAAGGGGGTGGCTGATTGGCAACTTCTGGATCTTTACTaGCTGGATCTGGGTGTTCCT +
Preference number: 4 (lower is better)
Translates to: FLSSRWQIFTGKGVADWQLLDLY*LDLGVP
Trigger: AGGAACACCCAGATCCAGGCAGTAAAGATCCAGAAG...TTGCCAATCAGCCACCCCCTTTCCTGTGAAAATCTGCCACCTTGAGGAGAGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343823.11
ENST00000545394.2
CDS-3UTR GCA 90 bp AAGATAAGCAAGACAGGAAACCACCCGCACATATATCAACATCCATGTTCCAAGGTTCCCATGGGGGACTaGGCCTCCCATCCACTTCTG +
Preference number: 4 (lower is better)
Translates to: KISKTGNHPHIYQHPCSKVPMGD*ASHPLL
Trigger: CAGAAGTGGATGGGAGGCGCAGTCCCCCATGGGAAC...CTTGGAACATGGATGTTGATATATGTGCGGGTGGTTTCCTGTCTTGCTTATCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343823.11
ENST00000545394.2
CDS-3UTR GCA 90 bp TCCTCTCCTCAAGGTGGCAGATTTTCACAGGAAAGGGGGTGGCTGATTGGCAAGGTGGGATACAGTCAATaGCCACAGAAGGAAATGTCT +
Preference number: 4 (lower is better)
Translates to: SSPQGGRFSQERGWLIGKVGYSQ*PQKEMS
Trigger: AGACATTTCCTTCTGTGGGCATTGACTGTATCCCAC...CTTGCCAATCAGCCACCCCCTTTCCTGTGAAAATCTGCCACCTTGAGGAGAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343823.11
ENST00000545394.2
CDS-3UTR CCA 90 bp TCCTCTCCTCAAGGTGGCAGATTTTCACAGGAAAGGGGGTGGCTGATTGGCAAGTCTGAGATCTTTAACTaGGGAGCTCGATCATGTAGG +
Preference number: 4 (lower is better)
Translates to: SSPQGGRFSQERGWLIGKSEIFN*GARSCR
Trigger: CCTACATGATCGAGCTCCCCAGTTAAAGATCTCAGA...CTTGCCAATCAGCCACCCCCTTTCCTGTGAAAATCTGCCACCTTGAGGAGAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343823.11
ENST00000545394.2
CDS-3UTR TCA 90 bp AAGATAAGCAAGACAGGAAACCACCCGCACATATATCAACATCCATGTTCCAAGTCCACGGAGCCCGCCTaGGTATCCATCACCTCTGAT +
Preference number: 4 (lower is better)
Translates to: KISKTGNHPHIYQHPCSKSTEPA*VSITSD
Trigger: ATCAGAGGTGATGGATACTCAGGCGGGCTCCGTGGA...CTTGGAACATGGATGTTGATATATGTGCGGGTGGTTTCCTGTCTTGCTTATCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343823.11
CDS-3UTR TCA 90 bp AATATACCGATAGCCATCTTTGTTAAACGGGTGTTCCAATGGGTAGCCATGAGGCCTTTCCGTACTCCATaGGAGGCCCTCACCATAGAG +
Preference number: 4 (lower is better)
Translates to: NIPIAIFVKRVFQWVAMRPFRTP*EALTIE
Trigger: CTCTATGGTGAGGGCCTCTCATGGAGTACGGAAAGG...CCTCATGGCTACCCATTGGAACACCCGTTTAACAAAGATGGCTATCGGTATATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517496.5
CDS-3UTR TCA 90 bp GACAGGAAACCACCCGCACATATATCAACATCCATGTTCCAAGGGAAGACCGGGGCATCTCATCCACAGTaGTTTCAAAATACCAGGCAC +
Preference number: 4 (lower is better)
Translates to: DRKPPAHISTSMFQGKTGASHPQ*FQNTRH
Trigger: GTGCCTGGTATTTTGAAATCACTGTGGATGAGATGC...CCCGGTCTTCCCTTGGAACATGGATGTTGATATATGTGCGGGTGGTTTCCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343823.11
ENST00000545394.2
CDS-3UTR GCA 90 bp AAGATAAGCAAGACAGGAAACCACCCGCACATATATCAACATCCATGTTCCAAGCTCTTCTGCCCCTGTTaGATTTGCGACCGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: KISKTGNHPHIYQHPCSKLFCPC*ICDRSW
Trigger: CCAGGAGCGGTCGCAAATGCAACAGGGGCAGAAGAG...CTTGGAACATGGATGTTGATATATGTGCGGGTGGTTTCCTGTCTTGCTTATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343823.11
ENST00000545394.2
CDS-3UTR GCA 90 bp TCCTCTCCTCAAGGTGGCAGATTTTCACAGGAAAGGGGGTGGCTGATTGGCAAGTGTGATGGCAGACGTTaGAATGAAAACTGTAGTTGG +
Preference number: 4 (lower is better)
Translates to: SSPQGGRFSQERGWLIGKCDGRR*NENCSW
Trigger: CCAACTACAGTTTTCATTGCAACGTCTGCCATCACA...CTTGCCAATCAGCCACCCCCTTTCCTGTGAAAATCTGCCACCTTGAGGAGAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000343823.11
ENST00000545394.2
CDS-3UTR CCA 90 bp TCCTCTCCTCAAGGTGGCAGATTTTCACAGGAAAGGGGGTGGCTGATTGGCAAGGGAGTCAGCGGTTGTTaGCTTATGGTACACAAAATA +
Preference number: 4 (lower is better)
Translates to: SSPQGGRFSQERGWLIGKGVSGC*LMVHKI
Trigger: TATTTTGTGTACCATAAGCCAACAACCGCTGACTCC...CTTGCCAATCAGCCACCCCCTTTCCTGTGAAAATCTGCCACCTTGAGGAGAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000343823.11
ENST00000545394.2
CDS-3UTR CCA 90 bp GGAAACCACCCGCACATATATCAACATCCATGTTCCAAGGGAAGACCGGGAGGGGGAGTCAGCGGTTGTTaGCTTATGGTACACAAAATA +
Preference number: 4 (lower is better)
Translates to: GNHPHIYQHPCSKGRPGGGVSGC*LMVHKI
Trigger: TATTTTGTGTACCATAAGCCAACAACCGCTGACTCC...CCCTCCCGGTCTTCCCTTGGAACATGGATGTTGATATATGTGCGGGTGGTTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343823.11
ENST00000545394.2
CDS-3UTR GCA 90 bp TTCCTCTCCTCAAGGTGGCAGATTTTCACAGGAAAGGGGGTGGCTGATTGGCAATGTGATGGCAGACGTTaGAATGAAAACTGTAGTTGG +
Preference number: 4 (lower is better)
Translates to: FLSSRWQIFTGKGVADWQCDGRR*NENCSW
Trigger: CCAACTACAGTTTTCATTGCAACGTCTGCCATCACA...TTGCCAATCAGCCACCCCCTTTCCTGTGAAAATCTGCCACCTTGAGGAGAGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000343823.11
ENST00000545394.2
CDS-3UTR CCA 90 bp AATATACCGATAGCCATCTTTGTTAAACGGGTGTTCCAATGGGTAGCCATGAGGAAACGGGTGTTCCAATaGGTAGCCATGAGGGGGAAG +
Preference number: 4 (lower is better)
Translates to: NIPIAIFVKRVFQWVAMRKRVFQ*VAMRGK
Trigger: CTTCCCCCTCATGGCTACCCATTGGAACACCCGTTT...CCTCATGGCTACCCATTGGAACACCCGTTTAACAAAGATGGCTATCGGTATATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517496.5
CDS-3UTR CCA 90 bp GACAGGAAACCACCCGCACATATATCAACATCCATGTTCCAAGGGAAGACCGGGAATATTATCTCACTATaGGGAGTCTGCTTCAGGCTC +
Preference number: 4 (lower is better)
Translates to: DRKPPAHISTSMFQGKTGNIISL*GVCFRL
Trigger: GAGCCTGAAGCAGACTCCCCATAGTGAGATAATATT...CCCGGTCTTCCCTTGGAACATGGATGTTGATATATGTGCGGGTGGTTTCCTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343823.11
ENST00000545394.2
CDS-3UTR CCA 90 bp TTCCTCTCCTCAAGGTGGCAGATTTTCACAGGAAAGGGGGTGGCTGATTGGCAAAATAAGAGCAGTCACTaGAAGTGGGGAGAAAATGGT +
Preference number: 4 (lower is better)
Translates to: FLSSRWQIFTGKGVADWQNKSSH*KWGENG
Trigger: ACCATTTTCTCCCCACTTCCAGTGACTGCTCTTATT...TTGCCAATCAGCCACCCCCTTTCCTGTGAAAATCTGCCACCTTGAGGAGAGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000343823.11
ENST00000545394.2
CDS-3UTR CCA 90 bp TTCCTCTCCTCAAGGTGGCAGATTTTCACAGGAAAGGGGGTGGCTGATTGGCAAAGGTTACCATTTCCTTaGAAAACAGGTGGGATACAG +
Preference number: 4 (lower is better)
Translates to: FLSSRWQIFTGKGVADWQRLPFP*KTGGIQ
Trigger: CTGTATCCCACCTGTTTTCCAAGGAAATGGTAACCT...TTGCCAATCAGCCACCCCCTTTCCTGTGAAAATCTGCCACCTTGAGGAGAGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000343823.11
ENST00000545394.2
CDS-3UTR TCA 90 bp AATATACCGATAGCCATCTTTGTTAAACGGGTGTTCCAATGGGTAGCCATGAGGGTATGTGTCTGGCAATaGCTTGGCTGTCTCTGTGTC +
Preference number: 4 (lower is better)
Translates to: NIPIAIFVKRVFQWVAMRVCVWQ*LGCLCV
Trigger: GACACAGAGACAGCCAAGTCATTGCCAGACACATAC...CCTCATGGCTACCCATTGGAACACCCGTTTAACAAAGATGGCTATCGGTATATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517496.5
CDS-3UTR TCA 90 bp AATATACCGATAGCCATCTTTGTTAAACGGGTGTTCCAATGGGTAGCCATGAGGGCAGCTCTTGTACAGTaGGATGGCTGGGAAGTAAAC +
Preference number: 4 (lower is better)
Translates to: NIPIAIFVKRVFQWVAMRAALVQ*DGWEVN
Trigger: GTTTACTTCCCAGCCATCTCACTGTACAAGAGCTGC...CCTCATGGCTACCCATTGGAACACCCGTTTAACAAAGATGGCTATCGGTATATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517496.5
CDS-3UTR GCA 90 bp GACAGGAAACCACCCGCACATATATCAACATCCATGTTCCAAGGGAAGACCGGGCATTTCCTTCAAGTTTaGTTGCTTCCGGAGGAAATA +
Preference number: 4 (lower is better)
Translates to: DRKPPAHISTSMFQGKTGHFLQV*LLPEEI
Trigger: TATTTCCTCCGGAAGCAAGCAAACTTGAAGGAAATG...CCCGGTCTTCCCTTGGAACATGGATGTTGATATATGTGCGGGTGGTTTCCTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343823.11
ENST00000545394.2
CDS-3UTR GCA 90 bp AAGATAAGCAAGACAGGAAACCACCCGCACATATATCAACATCCATGTTCCAAGTCCTGTGTTCGGGACTaGCATGTCAGGTTGGCCAAA +
Preference number: 4 (lower is better)
Translates to: KISKTGNHPHIYQHPCSKSCVRD*HVRLAK
Trigger: TTTGGCCAACCTGACATGGCAGTCCCGAACACAGGA...CTTGGAACATGGATGTTGATATATGTGCGGGTGGTTTCCTGTCTTGCTTATCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343823.11
ENST00000545394.2
CDS-3UTR GCA 90 bp AAGATAAGCAAGACAGGAAACCACCCGCACATATATCAACATCCATGTTCCAAGTTCACAGGGGGCTTATaGAATCCTGGAGTCAGCGGT +
Preference number: 4 (lower is better)
Translates to: KISKTGNHPHIYQHPCSKFTGGL*NPGVSG
Trigger: ACCGCTGACTCCAGGATTGCATAAGCCCCCTGTGAA...CTTGGAACATGGATGTTGATATATGTGCGGGTGGTTTCCTGTCTTGCTTATCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343823.11
ENST00000545394.2
CDS-3UTR CCA 90 bp AAGGAAGATAAGCAAGACAGGAAACCACCCGCACATATATCAACATCCATGTTCAAACGGGTGTTCCAATaGGTAGCCATGAGGGGGAAG +
Preference number: 4 (lower is better)
Translates to: KEDKQDRKPPAHISTSMFKRVFQ*VAMRGK
Trigger: CTTCCCCCTCATGGCTACCCATTGGAACACCCGTTT...GAACATGGATGTTGATATATGTGCGGGTGGTTTCCTGTCTTGCTTATCTTCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343823.11
ENST00000545394.2
CDS-3UTR CCA 90 bp AAGATAAGCAAGACAGGAAACCACCCGCACATATATCAACATCCATGTTCCAAGAAACGGGTGTTCCAATaGGTAGCCATGAGGGGGAAG +
Preference number: 4 (lower is better)
Translates to: KISKTGNHPHIYQHPCSKKRVFQ*VAMRGK
Trigger: CTTCCCCCTCATGGCTACCCATTGGAACACCCGTTT...CTTGGAACATGGATGTTGATATATGTGCGGGTGGTTTCCTGTCTTGCTTATCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343823.11
ENST00000545394.2
CDS-3UTR CCA 90 bp AAGGAAGATAAGCAAGACAGGAAACCACCCGCACATATATCAACATCCATGTTCGGGCTTATGCAATCCTaGAGTCAGCGGTTGTTGGCT +
Preference number: 4 (lower is better)
Translates to: KEDKQDRKPPAHISTSMFGLMQS*SQRLLA
Trigger: AGCCAACAACCGCTGACTCCAGGATTGCATAAGCCC...GAACATGGATGTTGATATATGTGCGGGTGGTTTCCTGTCTTGCTTATCTTCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343823.11
ENST00000545394.2
CDS-3UTR TCA 90 bp AAGGAAGATAAGCAAGACAGGAAACCACCCGCACATATATCAACATCCATGTTCGTATGTGTCTGGCAATaGCTTGGCTGTCTCTGTGTC +
Preference number: 4 (lower is better)
Translates to: KEDKQDRKPPAHISTSMFVCVWQ*LGCLCV
Trigger: GACACAGAGACAGCCAAGTCATTGCCAGACACATAC...GAACATGGATGTTGATATATGTGCGGGTGGTTTCCTGTCTTGCTTATCTTCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343823.11
ENST00000545394.2
CDS-3UTR TCA 90 bp AAGATAAGCAAGACAGGAAACCACCCGCACATATATCAACATCCATGTTCCAAGGTATGTGTCTGGCAATaGCTTGGCTGTCTCTGTGTC +
Preference number: 4 (lower is better)
Translates to: KISKTGNHPHIYQHPCSKVCVWQ*LGCLCV
Trigger: GACACAGAGACAGCCAAGTCATTGCCAGACACATAC...CTTGGAACATGGATGTTGATATATGTGCGGGTGGTTTCCTGTCTTGCTTATCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343823.11
ENST00000545394.2
CDS-3UTR TCA 90 bp AAGGAAGATAAGCAAGACAGGAAACCACCCGCACATATATCAACATCCATGTTCGCAGCTCTTGTACAGTaGGATGGCTGGGAAGTAAAC +
Preference number: 4 (lower is better)
Translates to: KEDKQDRKPPAHISTSMFAALVQ*DGWEVN
Trigger: GTTTACTTCCCAGCCATCTCACTGTACAAGAGCTGC...GAACATGGATGTTGATATATGTGCGGGTGGTTTCCTGTCTTGCTTATCTTCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343823.11
ENST00000545394.2
CDS-3UTR TCA 90 bp AAGGAAGATAAGCAAGACAGGAAACCACCCGCACATATATCAACATCCATGTTCTTCCCAGAAAGTCCTTaGCAGAAAAGAGGGACCTGG +
Preference number: 4 (lower is better)
Translates to: KEDKQDRKPPAHISTSMFFPESP*QKRGTW
Trigger: CCAGGTCCCTCTTTTCTGTCAAGGACTTTCTGGGAA...GAACATGGATGTTGATATATGTGCGGGTGGTTTCCTGTCTTGCTTATCTTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343823.11
ENST00000545394.2
CDS-3UTR TCA 90 bp AATATACCGATAGCCATCTTTGTTAAACGGGTGTTCCAATGGGTAGCCATGAGGGCATCTCATCCACAGTaGTTTCAAAATACCAGGCAC +
Preference number: 4 (lower is better)
Translates to: NIPIAIFVKRVFQWVAMRASHPQ*FQNTRH
Trigger: GTGCCTGGTATTTTGAAATCACTGTGGATGAGATGC...CCTCATGGCTACCCATTGGAACACCCGTTTAACAAAGATGGCTATCGGTATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517496.5
CDS-3UTR GCA 90 bp AAGATAAGCAAGACAGGAAACCACCCGCACATATATCAACATCCATGTTCCAAGCTTCTGGATCTTTACTaGCTGGATCTGGGTGTTCCT +
Preference number: 4 (lower is better)
Translates to: KISKTGNHPHIYQHPCSKLLDLY*LDLGVP
Trigger: AGGAACACCCAGATCCAGGCAGTAAAGATCCAGAAG...CTTGGAACATGGATGTTGATATATGTGCGGGTGGTTTCCTGTCTTGCTTATCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343823.11
ENST00000545394.2
CDS-3UTR CCA 90 bp AATATACCGATAGCCATCTTTGTTAAACGGGTGTTCCAATGGGTAGCCATGAGGTCTGAGATCTTTAACTaGGGAGCTCGATCATGTAGG +
Preference number: 4 (lower is better)
Translates to: NIPIAIFVKRVFQWVAMRSEIFN*GARSCR
Trigger: CCTACATGATCGAGCTCCCCAGTTAAAGATCTCAGA...CCTCATGGCTACCCATTGGAACACCCGTTTAACAAAGATGGCTATCGGTATATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517496.5
CDS-3UTR GCA 90 bp AATATACCGATAGCCATCTTTGTTAAACGGGTGTTCCAATGGGTAGCCATGAGGTGTGATGGCAGACGTTaGAATGAAAACTGTAGTTGG +
Preference number: 4 (lower is better)
Translates to: NIPIAIFVKRVFQWVAMRCDGRR*NENCSW
Trigger: CCAACTACAGTTTTCATTGCAACGTCTGCCATCACA...CCTCATGGCTACCCATTGGAACACCCGTTTAACAAAGATGGCTATCGGTATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517496.5
CDS-3UTR CCA 90 bp AATATACCGATAGCCATCTTTGTTAAACGGGTGTTCCAATGGGTAGCCATGAGGAATATTATCTCACTATaGGGAGTCTGCTTCAGGCTC +
Preference number: 4 (lower is better)
Translates to: NIPIAIFVKRVFQWVAMRNIISL*GVCFRL
Trigger: GAGCCTGAAGCAGACTCCCCATAGTGAGATAATATT...CCTCATGGCTACCCATTGGAACACCCGTTTAACAAAGATGGCTATCGGTATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517496.5
CDS-3UTR TCA 90 bp AAGATAAGCAAGACAGGAAACCACCCGCACATATATCAACATCCATGTTCCAAGCAAATGTGTCAGCCGTaGACCATTTTGTACAAATCC +
Preference number: 4 (lower is better)
Translates to: KISKTGNHPHIYQHPCSKQMCQP*TILYKS
Trigger: GGATTTGTACAAAATGGTTCACGGCTGACACATTTG...CTTGGAACATGGATGTTGATATATGTGCGGGTGGTTTCCTGTCTTGCTTATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343823.11
CDS-3UTR GCA 90 bp AATATACCGATAGCCATCTTTGTTAAACGGGTGTTCCAATGGGTAGCCATGAGGCATTTCCTTCAAGTTTaGTTGCTTCCGGAGGAAATA +
Preference number: 4 (lower is better)
Translates to: NIPIAIFVKRVFQWVAMRHFLQV*LLPEEI
Trigger: TATTTCCTCCGGAAGCAAGCAAACTTGAAGGAAATG...CCTCATGGCTACCCATTGGAACACCCGTTTAACAAAGATGGCTATCGGTATATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517496.5
CDS-3UTR GCA 90 bp AAGGAAGATAAGCAAGACAGGAAACCACCCGCACATATATCAACATCCATGTTCCATTTCCTTCAAGTTTaGTTGCTTCCGGAGGAAATA +
Preference number: 4 (lower is better)
Translates to: KEDKQDRKPPAHISTSMFHFLQV*LLPEEI
Trigger: TATTTCCTCCGGAAGCAAGCAAACTTGAAGGAAATG...GAACATGGATGTTGATATATGTGCGGGTGGTTTCCTGTCTTGCTTATCTTCCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343823.11
ENST00000545394.2
CDS GCA 90 bp TCCTGGGCCAGGCCCGGCACCCGCTTCCTGGCCAGGTCCTGCTCCTaGCGCCGCCATCACGGCCACCCCTGGACTTCTCGCGAGAATACT +
Preference number: 5 (lower is better)
Translates to: SWARPGTRFLARSCS*RRHHGHPWTSRENT
Trigger: AGTATTCTCGCGAGAAGTCCAGGGGTGGCCGTGATGGCGGCGGCAGGAGCAGGACCTGGCCAGGAAGCGGGTGCCGGGCCTGGCCCAGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517719.5
ENST00000545394.2
CDS GCA 90 bp CTCCCACCGCCCGTGAAAGGTGCGGAAGGGGCGTTATCCGAGATATaGTTGAGAGGGGACGGGCCAAGCGGCGCAGAGGCAGGGCGAGCC +
Preference number: 5 (lower is better)
Translates to: LPPPVKGAEGALSEI*LRGDGPSGAEAGRA
Trigger: GGCTCGCCCTGCCTCTGCGCCGCTTGGCCCGTCCCCTCTCAAGCATATCTCGGATAACGCCCCTTCCGCACCTTTCACGGGCGGTGGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428278.6
CDS GCA 90 bp TCAGAGATAACGACAGGAGCCTCAGCTCCCACCGCCCGTGAAAGGTaGGGAAGGGGCGTTATCCGAGATATGCTTGAGAGGGGACGGGCC +
Preference number: 5 (lower is better)
Translates to: SEITTGASAPTARER*GRGVIRDMLERGRA
Trigger: GGCCCGTCCCCTCTCAAGCATATCTCGGATAACGCCCCTTCCGCACCTTTCACGGGCGGTGGGAGCTGAGGCTCCTGTCGTTATCTCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428278.6
CDS-3UTR CAA 90 bp GGAAACCACCCGCACATATATCAACATCCATGTTCCAAGGGAAGACCGGGAGGGCTGCCCCTGTTGCATTaGCGACCGCTCCTGGGCCAG +
Preference number: 5 (lower is better)
Translates to: GNHPHIYQHPCSKGRPGGLPLLH*RPLLGQ
Trigger: CTGGCCCAGGAGCGGTCGCAAATGCAACAGGGGCAG...CCCTCCCGGTCTTCCCTTGGAACATGGATGTTGATATATGTGCGGGTGGTTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343823.11
ENST00000545394.2
CDS-3UTR CAA 90 bp CTCTTGTTCCTCTCCTCAAGGTGGCAGATTTTCACAGGAAAGGGGGTGGCTGATCTGCCCCTGTTGCATTaGCGACCGCTCCTGGGCCAG +
Preference number: 5 (lower is better)
Translates to: LLFLSSRWQIFTGKGVADLPLLH*RPLLGQ
Trigger: CTGGCCCAGGAGCGGTCGCAAATGCAACAGGGGCAG...ATCAGCCACCCCCTTTCCTGTGAAAATCTGCCACCTTGAGGAGAGGAACAAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000343823.11
ENST00000545394.2
CDS TCA 90 bp ACCTCACCCAACTGTCGGCCATTCTCTTCATCCACGGAGCCCGCCTaGGTATCCATCACCTCTGATGTATCCCCAGCACCTTCCTGGGTT +
Preference number: 5 (lower is better)
Translates to: TSPNCRPFSSSTEPA*VSITSDVSPAPSWV
Trigger: AACCCAGGAAGGTGCTGGGGATACATCAGAGGTGATGGATACTCAGGCGGGCTCCGTGGATGAAGAGAATGGCCGACAGTTGGGTGAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517719.5
CDS-3UTR CAA 90 bp GACAGGAAACCACCCGCACATATATCAACATCCATGTTCCAAGGGAAGACCGGGCCTCTTCTGCCCCTGTaGCATTTGCGACCGCTCCTG +
Preference number: 5 (lower is better)
Translates to: DRKPPAHISTSMFQGKTGPLLPL*HLRPLL
Trigger: CAGGAGCGGTCGCAAATGCAACAGGGGCAGAAGAGG...CCCGGTCTTCCCTTGGAACATGGATGTTGATATATGTGCGGGTGGTTTCCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343823.11
ENST00000545394.2
CDS TCA 90 bp ACCTCACCCAACTGTCGGCCATTCTCTTCATCCACGGAGCCCGCCTaGGTATCCATCACCTCTGATGTATCCCCAGCACCTTCTAGTGTA +
Preference number: 5 (lower is better)
Translates to: TSPNCRPFSSSTEPA*VSITSDVSPAPSSV
Trigger: TACACTAGAAGGTGCTGGGGATACATCAGAGGTGATGGATACTCAGGCGGGCTCCGTGGATGAAGAGAATGGCCGACAGTTGGGTGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343823.11
ENST00000428278.6
ENST00000521652.5
CDS GCA 90 bp GGAATATGTGAAGGCCTCCCGTTAAAGTGTGAGCTACCAGCTTCCTaGCAGGGTGCAAGGATCAGAGATAACGACAGGAGCCTCAGCTCC +
Preference number: 5 (lower is better)
Translates to: GICEGLPLKCELPAS*QGARIRDNDRSLSS
Trigger: GGAGCTGAGGCTCCTGTCGTTATCTCTGATCCTTGCACCCTGGCAGGAAGCTGGTAGCTCACACTTTAACGGGAGGCCTTCACATATTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000428278.6
ENST00000521652.5
CDS-3UTR CAA 90 bp AATATACCGATAGCCATCTTTGTTAAACGGGTGTTCCAATGGGTAGCCATGAGGCTGCCCCTGTTGCATTaGCGACCGCTCCTGGGCCAG +
Preference number: 5 (lower is better)
Translates to: NIPIAIFVKRVFQWVAMRLPLLH*RPLLGQ
Trigger: CTGGCCCAGGAGCGGTCGCAAATGCAACAGGGGCAG...CCTCATGGCTACCCATTGGAACACCCGTTTAACAAAGATGGCTATCGGTATATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517496.5
CDS-3UTR CAA 90 bp GACAGGAAACCACCCGCACATATATCAACATCCATGTTCCAAGGGAAGACCGGGTTACATCGACCAAGTTaGCCTCCCCGCCTTCAGCCT +
Preference number: 5 (lower is better)
Translates to: DRKPPAHISTSMFQGKTGLHRPS*PPRLQP
Trigger: AGGCTGAAGGCGGGGAGGCAAACTTGGTCGATGTAA...CCCGGTCTTCCCTTGGAACATGGATGTTGATATATGTGCGGGTGGTTTCCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343823.11
ENST00000545394.2
CDS-3UTR CAA 90 bp AATATACCGATAGCCATCTTTGTTAAACGGGTGTTCCAATGGGTAGCCATGAGGCCTCTTCTGCCCCTGTaGCATTTGCGACCGCTCCTG +
Preference number: 5 (lower is better)
Translates to: NIPIAIFVKRVFQWVAMRPLLPL*HLRPLL
Trigger: CAGGAGCGGTCGCAAATGCAACAGGGGCAGAAGAGG...CCTCATGGCTACCCATTGGAACACCCGTTTAACAAAGATGGCTATCGGTATATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517496.5
CDS-3UTR CAA 90 bp TTCCTCTCCTCAAGGTGGCAGATTTTCACAGGAAAGGGGGTGGCTGATTGGCAAGTGTCTGGCAATGACTaGGCTGTCTCTGTGTCTTCA +
Preference number: 5 (lower is better)
Translates to: FLSSRWQIFTGKGVADWQVSGND*AVSVSS
Trigger: TGAAGACACAGAGACAGCCAAGTCATTGCCAGACAC...TTGCCAATCAGCCACCCCCTTTCCTGTGAAAATCTGCCACCTTGAGGAGAGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343823.11
ENST00000545394.2
CDS-3UTR CAA 90 bp GGAAACCACCCGCACATATATCAACATCCATGTTCCAAGGGAAGACCGGGAGGGATTCCCAGAAAGTCCTaGACAGAAAAGAGGGACCTG +
Preference number: 5 (lower is better)
Translates to: GNHPHIYQHPCSKGRPGGIPRKS*TEKRDL
Trigger: CAGGTCCCTCTTTTCTGTCAAGGACTTTCTGGGAAT...CCCTCCCGGTCTTCCCTTGGAACATGGATGTTGATATATGTGCGGGTGGTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343823.11
ENST00000545394.2
CDS-3UTR CAA 90 bp TTCCTCTCCTCAAGGTGGCAGATTTTCACAGGAAAGGGGGTGGCTGATTGGCAATCCTGGAGTCAGCGGTaGTTGGCTTATGGTACACAA +
Preference number: 5 (lower is better)
Translates to: FLSSRWQIFTGKGVADWQSWSQR*LAYGTQ
Trigger: TTGTGTACCATAAGCCAACAACCGCTGACTCCAGGA...TTGCCAATCAGCCACCCCCTTTCCTGTGAAAATCTGCCACCTTGAGGAGAGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343823.11
ENST00000545394.2
CDS-3UTR CAA 90 bp GGAAACCACCCGCACATATATCAACATCCATGTTCCAAGGGAAGACCGGGAGGGAGCCCTTTTAAACTCTaGTTCCTCTCCTCAAGGTGG +
Preference number: 5 (lower is better)
Translates to: GNHPHIYQHPCSKGRPGGSPFKL*FLSSRW
Trigger: CCACCTTGAGGAGAGGAACAAGAGTTTAAAAGGGCT...CCCTCCCGGTCTTCCCTTGGAACATGGATGTTGATATATGTGCGGGTGGTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343823.11
ENST00000545394.2
CDS TCA 90 bp GGGAGAGGTTCAAAGAGAGGCAGCTCTCCCACCCTGTTTTCAGAGTaGCCGTTACTTCTTCCAGTCTGGCACTGCAAAGTGGTTTCTTTT +
Preference number: 5 (lower is better)
Translates to: GRGSKRGSSPTLFSE*PLLLPVWHCKVVSF
Trigger: AAAAGAAACCACTTTGCAGTGCCAGACTGGAAGAAGTAACGGTCACTCTGAAAACAGGGTGGGAGAGCTGCCTCTCTTTGAACCTCTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000428278.6
ENST00000517719.5
ENST00000521652.5
CDS-3UTR CAA 90 bp TTCCTCTCCTCAAGGTGGCAGATTTTCACAGGAAAGGGGGTGGCTGATTGGCAATGTACAAATCCCACATaGCAGCTCTACCTCACCCAA +
Preference number: 5 (lower is better)
Translates to: FLSSRWQIFTGKGVADWQCTNPT*QLYLTQ
Trigger: TTGGGTGAGGTAGAGCTGCAATGTGGGATTTGTACA...TTGCCAATCAGCCACCCCCTTTCCTGTGAAAATCTGCCACCTTGAGGAGAGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343823.11
CDS-3UTR CAA 90 bp GACAGGAAACCACCCGCACATATATCAACATCCATGTTCCAAGGGAAGACCGGGAGCACTGCTCTGTTTTaGGTTGTCATAAGCAGGACC +
Preference number: 5 (lower is better)
Translates to: DRKPPAHISTSMFQGKTGSTALF*VVISRT
Trigger: GGTCCTGCTTATGACAACCAAAAACAGAGCAGTGCT...CCCGGTCTTCCCTTGGAACATGGATGTTGATATATGTGCGGGTGGTTTCCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343823.11
ENST00000545394.2
CDS-3UTR CAA 90 bp CTCTTGTTCCTCTCCTCAAGGTGGCAGATTTTCACAGGAAAGGGGGTGGCTGATATTCCCAGAAAGTCCTaGACAGAAAAGAGGGACCTG +
Preference number: 5 (lower is better)
Translates to: LLFLSSRWQIFTGKGVADIPRKS*TEKRDL
Trigger: CAGGTCCCTCTTTTCTGTCAAGGACTTTCTGGGAAT...ATCAGCCACCCCCTTTCCTGTGAAAATCTGCCACCTTGAGGAGAGGAACAAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000343823.11
ENST00000545394.2
CDS-3UTR CAA 90 bp GGAAACCACCCGCACATATATCAACATCCATGTTCCAAGGGAAGACCGGGAGGGTGGAGTCAGCGGTTGTaGGCTTATGGTACACAAAAT +
Preference number: 5 (lower is better)
Translates to: GNHPHIYQHPCSKGRPGGWSQRL*AYGTQN
Trigger: ATTTTGTGTACCATAAGCCAACAACCGCTGACTCCA...CCCTCCCGGTCTTCCCTTGGAACATGGATGTTGATATATGTGCGGGTGGTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343823.11
ENST00000545394.2
CDS-3UTR CAA 90 bp AATATACCGATAGCCATCTTTGTTAAACGGGTGTTCCAATGGGTAGCCATGAGGTTACATCGACCAAGTTaGCCTCCCCGCCTTCAGCCT +
Preference number: 5 (lower is better)
Translates to: NIPIAIFVKRVFQWVAMRLHRPS*PPRLQP
Trigger: AGGCTGAAGGCGGGGAGGCAAACTTGGTCGATGTAA...CCTCATGGCTACCCATTGGAACACCCGTTTAACAAAGATGGCTATCGGTATATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517496.5
CDS-3UTR CAA 90 bp TCCTCTCCTCAAGGTGGCAGATTTTCACAGGAAAGGGGGTGGCTGATTGGCAAGACATTTCCTTCAAGTTaGCTTGCTTCCGGAGGAAAT +
Preference number: 5 (lower is better)
Translates to: SSPQGGRFSQERGWLIGKTFPSS*LASGGN
Trigger: ATTTCCTCCGGAAGCAAGCAAACTTGAAGGAAATGT...CTTGCCAATCAGCCACCCCCTTTCCTGTGAAAATCTGCCACCTTGAGGAGAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343823.11
ENST00000545394.2
CDS-3UTR CAA 90 bp AAGATAAGCAAGACAGGAAACCACCCGCACATATATCAACATCCATGTTCCAAGTCCTGCTGTTTGCGCTaGGCTCCTCGTCCTTTTCCG +
Preference number: 5 (lower is better)
Translates to: KISKTGNHPHIYQHPCSKSCCLR*APRPFP
Trigger: CGGAAAAGGACGAGGAGCCAAGCGCAAACAGCAGGA...CTTGGAACATGGATGTTGATATATGTGCGGGTGGTTTCCTGTCTTGCTTATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343823.11
ENST00000545394.2
CDS-3UTR CAA 90 bp GACAGGAAACCACCCGCACATATATCAACATCCATGTTCCAAGGGAAGACCGGGCAGGTTACCATTTCCTaGGAAAACAGGTGGGATACA +
Preference number: 5 (lower is better)
Translates to: DRKPPAHISTSMFQGKTGQVTIS*ENRWDT
Trigger: TGTATCCCACCTGTTTTCCAAGGAAATGGTAACCTG...CCCGGTCTTCCCTTGGAACATGGATGTTGATATATGTGCGGGTGGTTTCCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343823.11
ENST00000545394.2
CDS-3UTR CAA 90 bp TTCCTCTCCTCAAGGTGGCAGATTTTCACAGGAAAGGGGGTGGCTGATTGGCAACAGGTTACCATTTCCTaGGAAAACAGGTGGGATACA +
Preference number: 5 (lower is better)
Translates to: FLSSRWQIFTGKGVADWQQVTIS*ENRWDT
Trigger: TGTATCCCACCTGTTTTCCAAGGAAATGGTAACCTG...TTGCCAATCAGCCACCCCCTTTCCTGTGAAAATCTGCCACCTTGAGGAGAGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000343823.11
ENST00000545394.2
CDS-3UTR CAA 90 bp AAGATAAGCAAGACAGGAAACCACCCGCACATATATCAACATCCATGTTCCAAGTTACATCGACCAAGTTaGCCTCCCCGCCTTCAGCCT +
Preference number: 5 (lower is better)
Translates to: KISKTGNHPHIYQHPCSKLHRPS*PPRLQP
Trigger: AGGCTGAAGGCGGGGAGGCAAACTTGGTCGATGTAA...CTTGGAACATGGATGTTGATATATGTGCGGGTGGTTTCCTGTCTTGCTTATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343823.11
ENST00000545394.2
CDS-3UTR CAA 90 bp CTCTTGTTCCTCTCCTCAAGGTGGCAGATTTTCACAGGAAAGGGGGTGGCTGATACATTTCCTTCAAGTTaGCTTGCTTCCGGAGGAAAT +
Preference number: 5 (lower is better)
Translates to: LLFLSSRWQIFTGKGVADTFPSS*LASGGN
Trigger: ATTTCCTCCGGAAGCAAGCAAACTTGAAGGAAATGT...ATCAGCCACCCCCTTTCCTGTGAAAATCTGCCACCTTGAGGAGAGGAACAAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343823.11
ENST00000545394.2
CDS-3UTR CAA 90 bp GGAAACCACCCGCACATATATCAACATCCATGTTCCAAGGGAAGACCGGGAGGGATCAAAGCCTTATCTTaGTATGTGTCTGGCAATGAC +
Preference number: 5 (lower is better)
Translates to: GNHPHIYQHPCSKGRPGGIKALS*YVSGND
Trigger: GTCATTGCCAGACACATACAAAGATAAGGCTTTGAT...CCCTCCCGGTCTTCCCTTGGAACATGGATGTTGATATATGTGCGGGTGGTTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343823.11
ENST00000545394.2
CDS-3UTR CAA 90 bp TCCTCTCCTCAAGGTGGCAGATTTTCACAGGAAAGGGGGTGGCTGATTGGCAAGATCAAAGCCTTATCTTaGTATGTGTCTGGCAATGAC +
Preference number: 5 (lower is better)
Translates to: SSPQGGRFSQERGWLIGKIKALS*YVSGND
Trigger: GTCATTGCCAGACACATACAAAGATAAGGCTTTGAT...CTTGCCAATCAGCCACCCCCTTTCCTGTGAAAATCTGCCACCTTGAGGAGAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343823.11
ENST00000545394.2
CDS-3UTR CAA 90 bp AATATACCGATAGCCATCTTTGTTAAACGGGTGTTCCAATGGGTAGCCATGAGGGTGTCTGGCAATGACTaGGCTGTCTCTGTGTCTTCA +
Preference number: 5 (lower is better)
Translates to: NIPIAIFVKRVFQWVAMRVSGND*AVSVSS
Trigger: TGAAGACACAGAGACAGCCAAGTCATTGCCAGACAC...CCTCATGGCTACCCATTGGAACACCCGTTTAACAAAGATGGCTATCGGTATATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517496.5
CDS-3UTR CAA 90 bp AAGATAAGCAAGACAGGAAACCACCCGCACATATATCAACATCCATGTTCCAAGGTGTCTGGCAATGACTaGGCTGTCTCTGTGTCTTCA +
Preference number: 5 (lower is better)
Translates to: KISKTGNHPHIYQHPCSKVSGND*AVSVSS
Trigger: TGAAGACACAGAGACAGCCAAGTCATTGCCAGACAC...CTTGGAACATGGATGTTGATATATGTGCGGGTGGTTTCCTGTCTTGCTTATCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343823.11
ENST00000545394.2
CDS-3UTR CAA 90 bp AAGGAAGATAAGCAAGACAGGAAACCACCCGCACATATATCAACATCCATGTTCAGCACTGCTCTGTTTTaGGTTGTCATAAGCAGGACC +
Preference number: 5 (lower is better)
Translates to: KEDKQDRKPPAHISTSMFSTALF*VVISRT
Trigger: GGTCCTGCTTATGACAACCAAAAACAGAGCAGTGCT...GAACATGGATGTTGATATATGTGCGGGTGGTTTCCTGTCTTGCTTATCTTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343823.11
ENST00000545394.2
CDS-3UTR CAA 90 bp AAGGAAGATAAGCAAGACAGGAAACCACCCGCACATATATCAACATCCATGTTCAGCCCTTTTAAACTCTaGTTCCTCTCCTCAAGGTGG +
Preference number: 5 (lower is better)
Translates to: KEDKQDRKPPAHISTSMFSPFKL*FLSSRW
Trigger: CCACCTTGAGGAGAGGAACAAGAGTTTAAAAGGGCT...GAACATGGATGTTGATATATGTGCGGGTGGTTTCCTGTCTTGCTTATCTTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343823.11
ENST00000545394.2
CDS-3UTR CAA 90 bp AATATACCGATAGCCATCTTTGTTAAACGGGTGTTCCAATGGGTAGCCATGAGGACATTTCCTTCAAGTTaGCTTGCTTCCGGAGGAAAT +
Preference number: 5 (lower is better)
Translates to: NIPIAIFVKRVFQWVAMRTFPSS*LASGGN
Trigger: ATTTCCTCCGGAAGCAAGCAAACTTGAAGGAAATGT...CCTCATGGCTACCCATTGGAACACCCGTTTAACAAAGATGGCTATCGGTATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517496.5
CDS-3UTR CAA 90 bp AAGGAAGATAAGCAAGACAGGAAACCACCCGCACATATATCAACATCCATGTTCTGGAGTCAGCGGTTGTaGGCTTATGGTACACAAAAT +
Preference number: 5 (lower is better)
Translates to: KEDKQDRKPPAHISTSMFWSQRL*AYGTQN
Trigger: ATTTTGTGTACCATAAGCCAACAACCGCTGACTCCA...GAACATGGATGTTGATATATGTGCGGGTGGTTTCCTGTCTTGCTTATCTTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343823.11
ENST00000545394.2
CDS-3UTR CAA 90 bp AATATACCGATAGCCATCTTTGTTAAACGGGTGTTCCAATGGGTAGCCATGAGGATCAAAGCCTTATCTTaGTATGTGTCTGGCAATGAC +
Preference number: 5 (lower is better)
Translates to: NIPIAIFVKRVFQWVAMRIKALS*YVSGND
Trigger: GTCATTGCCAGACACATACAAAGATAAGGCTTTGAT...CCTCATGGCTACCCATTGGAACACCCGTTTAACAAAGATGGCTATCGGTATATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517496.5
CDS GCA 72 bp TGGGCCAGGCCCGGCACCCGCTTCCTGGCCAGGTCCTaGTCCTGCCGCCGCCATCACGGCCACCCCTGGACT +
Preference number: 6 (lower is better)
Translates to: WARPGTRFLARS*SCRRHHGHPWT
Trigger: AGTCCAGGGGTGGCCGTGATGGCGGCGGCAGGAGCAGGACCTGGCCAGGAAGCGGGTGCCGGGCCTGGCCCA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343823.11
ENST00000517719.5
ENST00000545394.2
CDS CAA 90 bp CCACCGCCCGTGAAAGGTGCGGAAGGGGCGTTATCCGAGATATGCTaGAGAGGGGACGGGCCAAGCGGCGCAGAGGCAGGGCGAGCCATT +
Preference number: 6 (lower is better)
Translates to: PPPVKGAEGALSEIC*RGDGPSGAEAGRAI
Trigger: AATGGCTCGCCCTGCCTCTGCGCCGCTTGGCCCGTCCCCTCTCAAGCATATCTCGGATAACGCCCCTTCCGCACCTTTCACGGGCGGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428278.6
CDS CCA 72 bp AGGTCCTGCTCCTGCCGCCGCCATCACGGCCACCCCTaGACTTCTCGCGAGAATACTCTCTTCTCTCGCGCG +
Preference number: 6 (lower is better)
Translates to: RSCSCRRHHGHP*TSRENTLFSRA
Trigger: CGCGCGAGAGAAGAGAGTATTCTCGCGAGAAGTCCAGGGGTGGCCGTGATGGCGGCGGCAGGAGCAGGACCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517719.5
ENST00000545394.2
CDS GCA 72 bp CCCGTGAAAGGTGCGGAAGGGGCGTTATCCGAGATATaGTTGAGAGGGGACGGGCCAAGCGGCGCAGAGGCA +
Preference number: 6 (lower is better)
Translates to: PVKGAEGALSEI*LRGDGPSGAEA
Trigger: TGCCTCTGCGCCGCTTGGCCCGTCCCCTCTCAAGCATATCTCGGATAACGCCCCTTCCGCACCTTTCACGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428278.6
CDS GCA 72 bp TCCAGGCTGCAGCGCAACAATGCGATCACGGCTCACTaGACCCTTGACCTCCTGGGCTCAGGGGATCCTCCC +
Preference number: 6 (lower is better)
Translates to: SRLQRNNAITAH*TLDLLGSGDPP
Trigger: GGGAGGATCCCCTGAGCCCAGGAGGTCAAGGGTGCAGTGAGCCGTGATCGCATTGTTGCGCTGCAGCCTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520079.1
CDS CAA 72 bp GTGAAAGGTGCGGAAGGGGCGTTATCCGAGATATGCTaGAGAGGGGACGGGCCAAGCGGCGCAGAGGCAGGG +
Preference number: 6 (lower is better)
Translates to: VKGAEGALSEIC*RGDGPSGAEAG
Trigger: CCCTGCCTCTGCGCCGCTTGGCCCGTCCCCTCTCAAGCATATCTCGGATAACGCCCCTTCCGCACCTTTCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428278.6
CDS TCA 72 bp AGAGATAACGACAGGAGCCTCAGCTCCCACCGCCCGTaGAAGGTGCGGAAGGGGCGTTATCCGAGATATGCT +
Preference number: 6 (lower is better)
Translates to: RDNDRSLSSHRP*KVRKGRYPRYA
Trigger: AGCATATCTCGGATAACGCCCCTTCCGCACCTTTCACGGGCGGTGGGAGCTGAGGCTCCTGTCGTTATCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428278.6
CDS TCA 72 bp AACTGTCGGCCATTCTCTTCATCCACGGAGCCCGCCTaGGTATCCATCACCTCTGATGTATCCCCAGCACCT +
Preference number: 6 (lower is better)
Translates to: NCRPFSSSTEPA*VSITSDVSPAP
Trigger: AGGTGCTGGGGATACATCAGAGGTGATGGATACTCAGGCGGGCTCCGTGGATGAAGAGAATGGCCGACAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343823.11
ENST00000428278.6
ENST00000517719.5
ENST00000521652.5
CDS GCA 72 bp GAAGGCCTCCCGTTAAAGTGTGAGCTACCAGCTTCCTaGCAGGGTGCAAGGATCAGAGATAACGACAGGAGC +
Preference number: 6 (lower is better)
Translates to: EGLPLKCELPAS*QGARIRDNDRS
Trigger: GCTCCTGTCGTTATCTCTGATCCTTGCACCCTGGCAGGAAGCTGGTAGCTCACACTTTAACGGGAGGCCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000428278.6
ENST00000521652.5
CDS GCA 72 bp TTTGCGCTTGGCTCCTCGTCCTTTTCCGCTGCTTCCTaGTGCAATTCCCCCTTTGAAGAGAAGGCAGATTGC +
Preference number: 6 (lower is better)
Translates to: FALGSSSFSAAS*CNSPFEEKADC
Trigger: GCAATCTGCCTTCTCTTCAAAGGGGGAATTGCAGCAGGAAGCAGCGGAAAAGGACGAGGAGCCAAGCGCAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518186.1
CDS TCA 72 bp GTCCTTTTCCGCTGCTTCCTGCTGCAATTCCCCCTTTaGAGAGAAGGCAGATTGCTTTCAATGAGCCACAAG +
Preference number: 6 (lower is better)
Translates to: VLFRCFLLQFPL*REGRLLSMSHK
Trigger: CTTGTGGCTCATTGAAAGCAATCTGCCTTCTCTTCAAAGGGGGAATTGCAGCAGGAAGCAGCGGAAAAGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518186.1
CDS GCA 72 bp GTGTCAGCCGTGAACCATTTTGTACAAATCCCACATTaGAGCTCTACCTCACCCAACTGTCGGCCATTCTCT +
Preference number: 6 (lower is better)
Translates to: VSAVNHFVQIPH*SSTSPNCRPFS
Trigger: AGAGAATGGCCGACAGTTGGGTGAGGTAGAGCTGCAATGTGGGATTTGTACAAAATGGTTCACGGCTGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343823.11
ENST00000428278.6
ENST00000517719.5
ENST00000521652.5
CDS CAA 72 bp TGTGTCAGCCGTGAACCATTTTGTACAAATCCCACATaGCAGCTCTACCTCACCCAACTGTCGGCCATTCTC +
Preference number: 6 (lower is better)
Translates to: CVSREPFCTNPT*QLYLTQLSAIL
Trigger: GAGAATGGCCGACAGTTGGGTGAGGTAGAGCTGCAATGTGGGATTTGTACAAAATGGTTCACGGCTGACACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343823.11
ENST00000428278.6
ENST00000517719.5
ENST00000521652.5
CDS CAA 72 bp TACATAATTGACTTTCCCCTATCTGCTCCTTTTCTCTaGCAACATGTGGATGACCATACCCTCCTACTTTCC +
Preference number: 6 (lower is better)
Translates to: YIIDFPLSAPFL*QHVDDHTLLLS
Trigger: GGAAAGTAGGAGGGTATGGTCATCCACATGTTGCAAGAGAAAAGGAGCAGATAGGGGAAAGTCAATTATGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520079.1
CDS CAA 72 bp TGTAACACCACAGGAGGATTTCCTTCCAAAGGCATATaGGATTTCACCCTAGTTTTCAAAGAATCTACTGAG +
Preference number: 6 (lower is better)
Translates to: CNTTGGFPSKGI*DFTLVFKESTE
Trigger: CTCAGTAGATTCTTTGAAAACTAGGGTGAAATCCAATATGCCTTTGGAAGGAAATCCTCCTGTGGTGTTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518186.1