RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ASH1L (Homo sapiens)

Ensembl gene IDs: ENSG00000116539

Ensembl transcript IDs: ENST00000368346.7, ENST00000392403.8, ENST00000477427.1, ENST00000478837.5, ENST00000492987.2, ENST00000548566.1, ENST00000548830.2, ENST00000676814.1, ENST00000677042.1, ENST00000677213.1, ENST00000677825.1, ENST00000677992.1, ENST00000678117.1, ENST00000678699.1, ENST00000679097.1, ENST00000679133.1, ENST00000679333.1

Found 3860 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTGCAGGCACTAAAAGGCTGTCTGGTTTTCCCAGGGTTCGGTCCTTaGTGTGGCTACGGCCTGGACTGGAAGAAGGTGGTGCAGAGGCAG +
Preference number: 1 (lower is better)
Translates to: LQALKGCLVFPGFGP*CGYGLDWKKVVQRQ
Trigger: CTGCCTCTGCACCACCTTCTTCCAGTCCAGGCCGTAGCCACAGCAAGGACCGAACCCTGGGAAAACCAGACAGCCTTTTAGTGCCTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR CCA 90 bp GGCACTAAAAGGCTGTCTGGTTTTCCCAGGGTTCGGTCCTTGCTGTaGCTACGGCCTGGACTGGAAGAAGGTGGTGCAGAGGCAGTTGCA +
Preference number: 1 (lower is better)
Translates to: GTKRLSGFPRVRSLL*LRPGLEEGGAEAVA
Trigger: TGCAACTGCCTCTGCACCACCTTCTTCCAGTCCAGGCCGTAGCCACAGCAAGGACCGAACCCTGGGAAAACCAGACAGCCTTTTAGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR GCA 90 bp GAGATAACAGTCGATAGGACTGACGGACCGGGTGGCCATCAGGGGTaGGCCGACTATCCCTCATCAGATACACACAGTCACCCTGACGAA +
Preference number: 1 (lower is better)
Translates to: EITVDRTDGPGGHQG*ADYPSSDTHSHPDE
Trigger: TTCGTCAGGGTGACTGTGTGTATCTGATGAGGGATAGTCGGCGCACCCCTGATGGCCACCCGGTCCGTCAGTCCTATCGACTGTTATCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000492987.2
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR TCA 90 bp CACAGTCACCCTGACGAAGCAGCAAGTCATCTCGGAGCAAACAGATaGAGTAGACACAGCCAGGTTGGGCATAGTGGGGCCGAGGGATCA +
Preference number: 1 (lower is better)
Translates to: HSHPDEAASHLGANR*SRHSQVGHSGAEGS
Trigger: TGATCCCTCGGCCCCACTATGCCCAACCTGGCTGTGTCTACTTCATCTGTTTGCTCCGAGATGACTTGCTGCTTCGTCAGGGTGACTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000492987.2
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR CCA 90 bp GACCTTTTCCGGGTAGGGCTACAATTTGTGCTCTCTGATGGCCGCTaGGAGGGTTTATCAGAGGTTGGCTGGGAGCCTGCCAAAGTCTGT +
Preference number: 1 (lower is better)
Translates to: DLFRVGLQFVLSDGR*EGLSEVGWEPAKVC
Trigger: ACAGACTTTGGCAGGCTCCCAGCCAACCTCTGATAAACCCTCCCAGCGGCCATCAGAGAGCACAAATTGTAGCCCTACCCGGAAAAGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR GCA 90 bp GCTGTGGCTACGGCCTGGACTGGAAGAAGGTGGTGCAGAGGCAGTTaGAATCACAGCATCAATACTTTTCTCCATGGGCTCTTGGTCCTC +
Preference number: 1 (lower is better)
Translates to: AVATAWTGRRWCRGS*NHSINTFLHGLLVL
Trigger: GAGGACCAAGAGCCCATGGAGAAAAGTATTGATGCTGTGATTGCAACTGCCTCTGCACCACCTTCTTCCAGTCCAGGCCGTAGCCACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR GCA 90 bp GGTTCGGTCCTTGCTGTGGCTACGGCCTGGACTGGAAGAAGGTGGTaGAGAGGCAGTTGCAATCACAGCATCAATACTTTTCTCCATGGG +
Preference number: 1 (lower is better)
Translates to: GSVLAVATAWTGRRW*RGSCNHSINTFLHG
Trigger: CCCATGGAGAAAAGTATTGATGCTGTGATTGCAACTGCCTCTGCACCACCTTCTTCCAGTCCAGGCCGTAGCCACAGCAAGGACCGAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR CCA 90 bp CTGGCTCCTCCAGGCTGGGTATCTCATTGGCTGCTTGCTCTTGACTaGCTAGAACCTCTTCAATCAAGGGTAGAGCATCATCCTCCTGGC +
Preference number: 1 (lower is better)
Translates to: LAPPGWVSHWLLALD*LEPLQSRVEHHPPG
Trigger: GCCAGGAGGATGATGCTCTACCCTTGATTGAAGAGGTTCTAGCCAGTCAAGAGCAAGCAGCCAATGAGATACCCAGCCTGGAGGAGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR TCA 90 bp GACCCTTCCCACCCCTGTCTATACCCAGAGAGCAGGAGGCAGGACTaGTTAGCTCCACTGGATCCCAGATGCTTGAGGTTCTCATTCTTT +
Preference number: 1 (lower is better)
Translates to: DPSHPCLYPESRRQD*LAPLDPRCLRFSFF
Trigger: AAAGAATGAGAACCTCAAGCATCTGGGATCCAGTGGAGCTAATCAGTCCTGCCTCCTGCTCTCTGGGTATAGACAGGGGTGGGAAGGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR TCA 90 bp CGTTCTGGCTCCTCCAGGCTGGGTATCTCATTGGCTGCTTGCTCTTaGCTGGCTAGAACCTCTTCAATCAAGGGTAGAGCATCATCCTCC +
Preference number: 1 (lower is better)
Translates to: RSGSSRLGISLAACS*LARTSSIKGRASSS
Trigger: GGAGGATGATGCTCTACCCTTGATTGAAGAGGTTCTAGCCAGTCAAGAGCAAGCAGCCAATGAGATACCCAGCCTGGAGGAGCCAGAACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR CCA 90 bp CAGGGTTCGGTCCTTGCTGTGGCTACGGCCTGGACTGGAAGAAGGTaGTGCAGAGGCAGTTGCAATCACAGCATCAATACTTTTCTCCAT +
Preference number: 1 (lower is better)
Translates to: QGSVLAVATAWTGRR*CRGSCNHSINTFLH
Trigger: ATGGAGAAAAGTATTGATGCTGTGATTGCAACTGCCTCTGCACCACCTTCTTCCAGTCCAGGCCGTAGCCACAGCAAGGACCGAACCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR TCA 90 bp GTTCAATTCTGGGTTGACAAACTGAGCAGCCTGGAATGCTTGCATTaGTACGACAGCCTGAAGGGGACATTTCCGAGGTCGACCTGGCCT +
Preference number: 1 (lower is better)
Translates to: VQFWVDKLSSLECLH*YDSLKGTFPRSTWP
Trigger: AGGCCAGGTCGACCTCGGAAATGTCCCCTTCAGGCTGTCGTATCAATGCAAGCATTCCAGGCTGCTCAGTTTGTCAACCCAGAATTGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR TCA 90 bp CACAGGCCTTGGGTCACACTGCTCACAAAGGTAGTGCTCCACATCTaGGTTCACTCCCATACAATCACAGTGCTGCCATACCATGCACTT +
Preference number: 1 (lower is better)
Translates to: HRPWVTLLTKVVLHI*VHSHTITVLPYHAL
Trigger: AAGTGCATGGTATGGCAGCACTGTGATTGTATGGGAGTGAACTCAGATGTGGAGCACTACCTTTGTGAGCAGTGTGACCCAAGGCCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR GCA 90 bp AGACATTGCACCCATTCATGCCTCTGTATCCTCTGGTTACAGCATTaGTCGCCACATGGGCAAGTGTTGGGGGAACACTCAGCAAAGATC +
Preference number: 1 (lower is better)
Translates to: RHCTHSCLCILWLQH*SPHGQVLGEHSAKI
Trigger: GATCTTTGCTGAGTGTTCCCCCAACACTTGCCCATGTGGCGAGCAATGCTGTAACCAGAGGATACAGAGGCATGAATGGGTGCAATGTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR CCA 90 bp CGAAATCGTTCTAGACATTGCACCCATTCATGCCTCTGTATCCTCTaGTTACAGCATTGCTCGCCACATGGGCAAGTGTTGGGGGAACAC +
Preference number: 1 (lower is better)
Translates to: RNRSRHCTHSCLCIL*LQHCSPHGQVLGEH
Trigger: GTGTTCCCCCAACACTTGCCCATGTGGCGAGCAATGCTGTAACCAGAGGATACAGAGGCATGAATGGGTGCAATGTCTAGAACGATTTCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR TCA 90 bp AGTAATGGGGGAAGAATCTGTCCTAATGCTGACCCAGCTGCCTGTTaGGCTGTTTGCTCAAGAACAGCAAGGCTAGTAGGACTACCAGAA +
Preference number: 1 (lower is better)
Translates to: SNGGRICPNADPAAC*AVCSRTARLVGLPE
Trigger: TTCTGGTAGTCCTACTAGCCTTGCTGTTCTTGAGCAAACAGCTCAACAGGCAGCTGGGTCAGCATTAGGACAGATTCTTCCCCCATTACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR GCA 90 bp AGCCTCAATTACATCTGTAACTGTGTCAGGACTGAGGTGCAGTGCTaGTCCTTCCTCGTCTCTGTTCAATTCTGGGTTGACAAACTGAGC +
Preference number: 1 (lower is better)
Translates to: SLNYICNCVRTEVQC*SFLVSVQFWVDKLS
Trigger: GCTCAGTTTGTCAACCCAGAATTGAACAGAGACGAGGAAGGAGCAGCACTGCACCTCAGTCCTGACACAGTTACAGATGTAATTGAGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR CCA 90 bp GTGGTGCAGAGGCAGTTGCAATCACAGCATCAATACTTTTCTCCATaGGCTCTTGGTCCTCATTTTGTACCATCCGCTGCAGCAGACTAT +
Preference number: 1 (lower is better)
Translates to: VVQRQLQSQHQYFSP*ALGPHFVPSAAADY
Trigger: ATAGTCTGCTGCAGCGGATGGTACAAAATGAGGACCAAGAGCCCATGGAGAAAAGTATTGATGCTGTGATTGCAACTGCCTCTGCACCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR CCA 90 bp CCATTCATGCCTCTGTATCCTCTGGTTACAGCATTGCTCGCCACATaGGCAAGTGTTGGGGGAACACTCAGCAAAGATCATTCTATTGAG +
Preference number: 1 (lower is better)
Translates to: PFMPLYPLVTALLAT*ASVGGTLSKDHSIE
Trigger: CTCAATAGAATGATCTTTGCTGAGTGTTCCCCCAACACTTGCCCATGTGGCGAGCAATGCTGTAACCAGAGGATACAGAGGCATGAATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR TCA 90 bp AAAGGTCCAACACACAGCAGGTCCCCACTACAGCCTCCAAGGGAATaGTCTCATAGAGTGGCACCCGAAATAGTTCATTATGATAGAACC +
Preference number: 1 (lower is better)
Translates to: KGPTHSRSPLQPPRE*SHRVAPEIVHYDRT
Trigger: GGTTCTATCATAATGAACTATTTCGGGTGCCACTCTATGAGATCATTCCCTTGGAGGCTGTAGTGGGGACCTGCTGTGTGTTGGACCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR TCA 90 bp GCAGACAGGATAGCGGTTCCGGTGGATCTTGTAAAACAGGTGTGCTaGCTTGTCAAGCCGATAATCACAGATGTACACATCTTGCTCCTT +
Preference number: 1 (lower is better)
Translates to: ADRIAVPVDLVKQVC*LVKPIITDVHILLL
Trigger: AAGGAGCAAGATGTGTACATCTGTGATTATCGGCTTGACAAGTCAGCACACCTGTTTTACAAGATCCACCGGAACCGCTATCCTGTCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR GCA 90 bp GTTTGTACTACAAGAAGCCTTAAGCGGTTCCTGAGTGGGGAGCAGTaGTTCGGCTTTAAGGTTTATGGCATCTTTACTGATCAGACCTGC +
Preference number: 1 (lower is better)
Translates to: VCTTRSLKRFLSGEQ*FGFKVYGIFTDQTC
Trigger: GCAGGTCTGATCAGTAAAGATGCCATAAACCTTAAAGCCGAAGCACTGCTCCCCACTCAGGAACCGCTTAAGGCTTCTTGTAGTACAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR GCA 90 bp CTGATTCCCCAACCTTTTTCCTCAGCTCGAAATCGTTCTAGACATTaGACCCATTCATGCCTCTGTATCCTCTGGTTACAGCATTGCTCG +
Preference number: 1 (lower is better)
Translates to: LIPQPFSSARNRSRH*THSCLCILWLQHCS
Trigger: CGAGCAATGCTGTAACCAGAGGATACAGAGGCATGAATGGGTGCAATGTCTAGAACGATTTCGAGCTGAGGAAAAAGGTTGGGGAATCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR GCA 90 bp TCCTCCCCTTTGAGGCCTTCTTCATTGCAAGAGTCTGAATCATACTaGCCTGTCTGGAGTGTAAATGCAAATATGGCACTGAACTGGGTT +
Preference number: 1 (lower is better)
Translates to: SSPLRPSSLQESESY*PVWSVNANMALNWV
Trigger: AACCCAGTTCAGTGCCATATTTGCATTTACACTCCAGACAGGGCAGTATGATTCAGACTCTTGCAATGAAGAAGGCCTCAAAGGGGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR GCA 90 bp GATAAGCTTGGAGAACTTTCTGAACAGTCAATCTGTAAAGGTGTCTaGAATCCCAAGGCCAATGGACTAGATTCTGAAGGCTCTCGGTGG +
Preference number: 1 (lower is better)
Translates to: DKLGELSEQSICKGV*NPKANGLDSEGSRW
Trigger: CCACCGAGAGCCTTCAGAATCTAGTCCATTGGCCTTGGGATTGCAGACACCTTTACAGATTGACTGTTCAGAAAGTTCTCCAAGCTTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR TCA 90 bp AAAGGTTTGTATGTTCATCACTGCTGGCTGGCTCAGAGTTGGGAGTaGATCCTCCAAGGGATAAGCTTGGAGAACTTTCTGAACAGTCAA +
Preference number: 1 (lower is better)
Translates to: KGLYVHHCWLAQSWE*ILQGISLENFLNSQ
Trigger: TTGACTGTTCAGAAAGTTCTCCAAGCTTATCCCTTGGAGGATTCACTCCCAACTCTGAGCCAGCCAGCAGTGATGAACATACAAACCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR GCA 90 bp GCAATCACACAGCCTACAGACATGCAGACTAACTCTGTATCTATTTaGAGTGATGTAGTGCTTTGCCCCGCATTTCAAACACCAAAACCC +
Preference number: 1 (lower is better)
Translates to: AITQPTDMQTNSVSI*SDVVLCPAFQTPKP
Trigger: GGGTTTTGGTGTTTGAAATGCGGGGCAAAGCACTACATCACTGCAAATAGATACAGAGTTAGTCTGCATGTCTGTAGGCTGTGTGATTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR CCA 90 bp AGAAAGCACAGGCTGCAAGGTACTTTCAGGTTCAGAAGGTTTAGCTaGGGTTTCAGAAGGACTGGGAATCTCAACTGGTGCTTCATTAAA +
Preference number: 1 (lower is better)
Translates to: RKHRLQGTFRFRRFS*GFRRTGNLNWCFIK
Trigger: TTTAATGAAGCACCAGTTGAGATTCCCAGTCCTTCTGAAACCCCAGCTAAACCTTCTGAACCTGAAAGTACCTTGCAGCCTGTGCTTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR GCA 90 bp GGTCATCTGGATCCTGAAGTTGATCCTCGCTCTCAAAGAAATCACTaGTACTTCTATGGTTGTCACTTTCAGATTCTAGCTTGCTTGGAC +
Preference number: 1 (lower is better)
Translates to: GHLDPEVDPRSQRNH*YFYGCHFQILACLD
Trigger: GTCCAAGCAAGCTAGAATCTGAAAGTGACAACCATAGAAGTAGCAGTGATTTCTTTGAGAGCGAGGATCAACTTCAGGATCCAGATGACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR GCA 90 bp AGAAATCACTGCTACTTCTATGGTTGTCACTTTCAGATTCTAGCTTaGTTGGACTTTCAGTGGCAACAAATGGAGCCACTGACAGTACAG +
Preference number: 1 (lower is better)
Translates to: RNHCYFYGCHFQILA*LDFQWQQMEPLTVQ
Trigger: CTGTACTGTCAGTGGCTCCATTTGTTGCCACTGAAAGTCCAAGCAAGCTAGAATCTGAAAGTGACAACCATAGAAGTAGCAGTGATTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR CCA 90 bp TTGAGGCCTTCTTCATTGCAAGAGTCTGAATCATACTGCCCTGTCTaGAGTGTAAATGCAAATATGGCACTGAACTGGGTTCAACAAAAC +
Preference number: 1 (lower is better)
Translates to: LRPSSLQESESYCPV*SVNANMALNWVQQN
Trigger: GTTTTGTTGAACCCAGTTCAGTGCCATATTTGCATTTACACTCCAGACAGGGCAGTATGATTCAGACTCTTGCAATGAAGAAGGCCTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR TCA 90 bp GCTCAACTTTGGCAATCGGCGTTTAAGGAAGTCATGATCTACAAATaGAGGGGGTCCAATGTTTTTCATAAACTTGGCTGGCTCAGAATT +
Preference number: 1 (lower is better)
Translates to: AQLWQSAFKEVMIYK*RGSNVFHKLGWLRI
Trigger: AATTCTGAGCCAGCCAAGTTTATGAAAAACATTGGACCCCCTTCATTTGTAGATCATGACTTCCTTAAACGCCGATTGCCAAAGTTGAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR TCA 90 bp GCTGTGGATTTGCTCAACTTTGGCAATCGGCGTTTAAGGAAGTCATaGTCTACAAATGAAGGGGGTCCAATGTTTTTCATAAACTTGGCT +
Preference number: 1 (lower is better)
Translates to: AVDLLNFGNRRLRKS*STNEGGPMFFINLA
Trigger: AGCCAAGTTTATGAAAAACATTGGACCCCCTTCATTTGTAGATCATGACTTCCTTAAACGCCGATTGCCAAAGTTGAGCAAATCCACAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR TCA 90 bp TTATCTGTTCCAATTCCACTATCACTGGGAATGGTCTCATCACTATaGGACTCACTGATTGGGGAAGGAGTAGCTTCTTTTAGAGATGTG +
Preference number: 1 (lower is better)
Translates to: LSVPIPLSLGMVSSL*DSLIGEGVASFRDV
Trigger: CACATCTCTAAAAGAAGCTACTCCTTCCCCAATCAGTGAGTCTCATAGTGATGAGACCATTCCCAGTGATAGTGGAATTGGAACAGATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR TCA 90 bp CCTGTCGAAGTAGCTTATGCTTTTTCTTATGGTATTTGGCAGGATTaGGAAGTAAATGACCAGCATGCATATAGGAAGGAGGTGGAAGTG +
Preference number: 1 (lower is better)
Translates to: PVEVAYAFSYGIWQD*EVNDQHAYRKEVEV
Trigger: CACTTCCACCTCCTTCCTATATGCATGCTGGTCATTTACTTCTCAATCCTGCCAAATACCATAAGAAAAAGCATAAGCTACTTCGACAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR CCA 90 bp TTTCACAGAGTCCTTATTGACCAATCCTACTGCTGCATTAAACACTaGCTTTTTCCCAGGATCTTTAGTTACCAATCCAACTGCTGTGCT +
Preference number: 1 (lower is better)
Translates to: FHRVLIDQSYCCIKH*LFPRIFSYQSNCCA
Trigger: AGCACAGCAGTTGGATTGGTAACTAAAGATCCTGGGAAAAAGCCAGTGTTTAATGCAGCAGTAGGATTGGTCAATAAGGACTCTGTGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR CCA 90 bp TCCCATTCCAACGGGTATATAATGATGCTGAGTGAATATTATCACTaGTGTGCTTTACTTCCTCCTGTTTTTGACGAATCTTCTCCCAGT +
Preference number: 1 (lower is better)
Translates to: SHSNGYIMMLSEYYH*CALLPPVFDESSPS
Trigger: ACTGGGAGAAGATTCGTCAAAAACAGGAGGAAGTAAAGCACACCAGTGATAATATTCACTCAGCATCATTATATACCCGTTGGAATGGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR TCA 90 bp ACCAAGAAGAGTAGATGGCGTTGCATTAATATAATCTGCCATTTCTaGGTGTACTGGAGACAGCTTCTTAGACAAAGGATTGTTTTCTCC +
Preference number: 1 (lower is better)
Translates to: TKKSRWRCINIICHF*VYWRQLLRQRIVFS
Trigger: GGAGAAAACAATCCTTTGTCTAAGAAGCTGTCTCCAGTACACTCAGAAATGGCAGATTATATTAATGCAACGCCATCTACTCTTCTTGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR TCA 90 bp ATTTATCTGTTGGCCCAATTTAGAGCCAAATGTGGCAGCAAGACTTaGTACCGTATTATGGAGTTTGGATTGCACTTTCCCTTTATTACT +
Preference number: 1 (lower is better)
Translates to: IYLLAQFRAKCGSKT*YRIMEFGLHFPFIT
Trigger: AGTAATAAAGGGAAAGTGCAATCCAAACTCCATAATACGGTATCAAGTCTTGCTGCCACATTTGGCTCTAAATTGGGCCAACAGATAAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR TCA 90 bp CTCTTTATCAATCCCTTTACATTCAATACTTATACTATGACCAACTaGCCTATGACCAACGTTCAAGTGGGTACTTTCAGAAGTAAACTG +
Preference number: 1 (lower is better)
Translates to: LFINPFTFNTYTMTN*PMTNVQVGTFRSKL
Trigger: CAGTTTACTTCTGAAAGTACCCACTTGAACGTTGGTCATAGGTCAGTTGGTCATAGTATAAGTATTGAATGTAAAGGGATTGATAAAGAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR CCA 90 bp AGAAGGATGTGTATAGAAACTATTAAAGTTGATTCGAAAGATAGTTaGCAGAAGATCTCGGGGGATAAAATGATGACTTCGATGAGTGAT +
Preference number: 1 (lower is better)
Translates to: RRMCIETIKVDSKDS*QKISGDKMMTSMSD
Trigger: ATCACTCATCGAAGTCATCATTTTATCCCCCGAGATCTTCTGCCAACTATCTTTCGAATCAACTTTAATAGTTTCTATACACATCCTTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR-3UTR TCA 90 bp GATAGGACTGACGGACCGGGTGGCCATCAGGGGTGCGCCGACTATCCCTCATCAAGCAGGAGGCAGGACTaGTTAGCTCCACTGGATCCC +
Preference number: 2 (lower is better)
Translates to: DRTDGPGGHQGCADYPSSSRRQD*LAPLDP
Trigger: GGGATCCAGTGGAGCTAATCAGTCCTGCCTCCTGCT...TGATGAGGGATAGTCGGCGCACCCCTGATGGCCACCCGGTCCGTCAGTCCTATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR TCA 90 bp TCGATAGGACTGACGGACCGGGTGGCCATCAGGGGTGCGCCGACTATCCCTCATCTGGTCTCGAACTCCTaGGCTCAGGCAATCCATCCG +
Preference number: 2 (lower is better)
Translates to: SIGLTDRVAIRGAPTIPHLVSNS*AQAIHP
Trigger: CGGATGGATTGCCTGAGCTCAGGAGTTCGAGACCAG...ATGAGGGATAGTCGGCGCACCCCTGATGGCCACCCGGTCCGTCAGTCCTATCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492987.2
3UTR-3UTR GCA 90 bp ACTGACGGACCGGGTGGCCATCAGGGGTGCGCCGACTATCCCTCATCAGATACATGGCCCCATTCCCCTTaGCCAGATGGACCCTTCCCA +
Preference number: 2 (lower is better)
Translates to: TDGPGGHQGCADYPSSDTWPHSP*PDGPFP
Trigger: TGGGAAGGGTCCATCTGGGCAAGGGGAATGGGGCCA...TGTATCTGATGAGGGATAGTCGGCGCACCCCTGATGGCCACCCGGTCCGTCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CCA 90 bp CCGGGTGGCCATCAGGGGTGCGCCGACTATCCCTCATCAGATACACACAGTCACGGCTACGGCCTGGACTaGAAGAAGGTGGTGCAGAGG +
Preference number: 2 (lower is better)
Translates to: PGGHQGCADYPSSDTHSHGYGLD*KKVVQR
Trigger: CCTCTGCACCACCTTCTTCCAGTCCAGGCCGTAGCC...GTGACTGTGTGTATCTGATGAGGGATAGTCGGCGCACCCCTGATGGCCACCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CCA 90 bp CCGGGTGGCCATCAGGGGTGCGCCGACTATCCCTCATCAGATACACACAGTCACGCTGTGGCTACGGCCTaGACTGGAAGAAGGTGGTGC +
Preference number: 2 (lower is better)
Translates to: PGGHQGCADYPSSDTHSHAVATA*TGRRWC
Trigger: GCACCACCTTCTTCCAGTCCAGGCCGTAGCCACAGC...GTGACTGTGTGTATCTGATGAGGGATAGTCGGCGCACCCCTGATGGCCACCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR TCA 90 bp CCGGGTGGCCATCAGGGGTGCGCCGACTATCCCTCATCAGATACACACAGTCACATCATGGGAACCTCCTaGGACTTCAGGTGCACGCCT +
Preference number: 2 (lower is better)
Translates to: PGGHQGCADYPSSDTHSHIMGTS*DFRCTP
Trigger: AGGCGTGCACCTGAAGTCTCAGGAGGTTCCCATGAT...GTGACTGTGTGTATCTGATGAGGGATAGTCGGCGCACCCCTGATGGCCACCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492987.2
3UTR-3UTR GCA 90 bp GATAGGACTGACGGACCGGGTGGCCATCAGGGGTGCGCCGACTATCCCTCATCACTCTGGTTACAGCATTaGTCGCCACATGGGCAAGTG +
Preference number: 2 (lower is better)
Translates to: DRTDGPGGHQGCADYPSSLWLQH*SPHGQV
Trigger: CACTTGCCCATGTGGCGAGCAATGCTGTAACCAGAG...TGATGAGGGATAGTCGGCGCACCCCTGATGGCCACCCGGTCCGTCAGTCCTATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CCA 90 bp CTAATGTCAACAACATGGCCCCATTCCCCTTGCCCAGATGGACCCTTCCCACCCGCCCTTCTGACCCCATaGGGGCCTTCCCTATCCCAT +
Preference number: 2 (lower is better)
Translates to: LMSTTWPHSPCPDGPFPPALLTP*GPSLSH
Trigger: ATGGGATAGGGAAGGCCCCCATGGGGTCAGAAGGGC...GGGTGGGAAGGGTCCATCTGGGCAAGGGGAATGGGGCCATGTTGTTGACATTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR CCA 90 bp GTGGCCATCAGGGGTGCGCCGACTATCCCTCATCAGATACACACAGTCACCCTGGGGGCCGAGGGATCATaGGAACCTCCTGAGACTTCA +
Preference number: 2 (lower is better)
Translates to: VAIRGAPTIPHQIHTVTLGAEGS*EPPETS
Trigger: TGAAGTCTCAGGAGGTTCCCATGATCCCTCGGCCCC...CAGGGTGACTGTGTGTATCTGATGAGGGATAGTCGGCGCACCCCTGATGGCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000492987.2
3UTR CAA 90 bp ACTGCAGGCACTAAAAGGCTGTCTGGTTTTCCCAGGGTTCGGTCCTaGCTGTGGCTACGGCCTGGACTGGAAGAAGGTGGTGCAGAGGCA +
Preference number: 2 (lower is better)
Translates to: TAGTKRLSGFPRVRS*LWLRPGLEEGGAEA
Trigger: TGCCTCTGCACCACCTTCTTCCAGTCCAGGCCGTAGCCACAGCAAGGACCGAACCCTGGGAAAACCAGACAGCCTTTTAGTGCCTGCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR GCA 90 bp ACACACAAGAACTACAGCGCATTAAAAACAGCATGTGTGCTGGCGGGGGCCTGGCCAGGGTTCGGTCCTTaGTGTGGCTACGGCCTGGAC +
Preference number: 2 (lower is better)
Translates to: THKNYSALKTACVLAGAWPGFGP*CGYGLD
Trigger: GTCCAGGCCGTAGCCACAGCAAGGACCGAACCCTGG...CCAGGCCCCCGCCAGCACACATGCTGTTTTTAATGCGCTGTAGTTCTTGTGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR CAA 90 bp CAGCAAGTCATCTCGGAGCAAACAGATGAAGTAGACACAGCCAGGTaGGGCATAGTGGGGCCGAGGGATCATGGGAACCTCCCTGTCCAC +
Preference number: 2 (lower is better)
Translates to: QQVISEQTDEVDTAR*GIVGPRDHGNLPVH
Trigger: GTGGACAGGGAGGTTCCCATGATCCCTCGGCCCCACTATGCCCAACCTGGCTGTGTCTACTTCATCTGTTTGCTCCGAGATGACTTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR TCA 90 bp TGTGAGATAACAGTCGATAGGACTGACGGACCGGGTGGCCATCAGGGGTGCGCCTACACACAGTCACCCTaGCGAAGCAGCAAGTCATCT +
Preference number: 2 (lower is better)
Translates to: CEITVDRTDGPGGHQGCAYTQSP*RSSKSS
Trigger: AGATGACTTGCTGCTTCGTCAGGGTGACTGTGTGTA...GGCGCACCCCTGATGGCCACCCGGTCCGTCAGTCCTATCGACTGTTATCTCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000492987.2
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR TCA 90 bp GTAGACACAGCCAGGTTGGGCATAGTGGGGCCGAGGGATCATGGGAACCTCCCTTGCAAGAGTCACTTGTaGCTGCAGGCACTAAAAGGC +
Preference number: 2 (lower is better)
Translates to: VDTARLGIVGPRDHGNLPCKSHL*LQALKG
Trigger: GCCTTTTAGTGCCTGCAGTCACAAGTGACTCTTGCA...AGGGAGGTTCCCATGATCCCTCGGCCCCACTATGCCCAACCTGGCTGTGTCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR GCA 90 bp ACACACAAGAACTACAGCGCATTAAAAACAGCATGTGTGCTGGCGGGGGCCTGGTGGCCCCATTCCCCTTaGCCAGATGGACCCTTCCCA +
Preference number: 2 (lower is better)
Translates to: THKNYSALKTACVLAGAWWPHSP*PDGPFP
Trigger: TGGGAAGGGTCCATCTGGGCAAGGGGAATGGGGCCA...CCAGGCCCCCGCCAGCACACATGCTGTTTTTAATGCGCTGTAGTTCTTGTGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR GCA 90 bp CTGGATATACCTCCTGATGTCATTCAGGAGGGTGAGGGAAGATGGGCTAGGGGTTGGCCCCATTCCCCTTaGCCAGATGGACCCTTCCCA +
Preference number: 2 (lower is better)
Translates to: LDIPPDVIQEGEGRWARGWPHSP*PDGPFP
Trigger: TGGGAAGGGTCCATCTGGGCAAGGGGAATGGGGCCA...ACCCCTAGCCCATCTTCCCTCACCCTCCTGAATGACATCAGGAGGTATATCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR GCA 90 bp GATAGGACTGACGGACCGGGTGGCCATCAGGGGTGCGCCGACTATCCCTCATCAAAACGGGCTTGGACATaGGATTTTTCCAGCTCCACA +
Preference number: 2 (lower is better)
Translates to: DRTDGPGGHQGCADYPSSKRAWT*DFSSST
Trigger: TGTGGAGCTGGAAAAATCGCATGTCCAAGCCCGTTT...TGATGAGGGATAGTCGGCGCACCCCTGATGGCCACCCGGTCCGTCAGTCCTATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR GCA 90 bp GATAGGACTGACGGACCGGGTGGCCATCAGGGGTGCGCCGACTATCCCTCATCAATTTTCCTCTGCAGCTaGCAACCGTCTTGTTCGAAC +
Preference number: 2 (lower is better)
Translates to: DRTDGPGGHQGCADYPSSIFLCS*QPSCSN
Trigger: GTTCGAACAAGACGGTTGGCAGCTGCAGAGGAAAAT...TGATGAGGGATAGTCGGCGCACCCCTGATGGCCACCCGGTCCGTCAGTCCTATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CCA 90 bp GATAGGACTGACGGACCGGGTGGCCATCAGGGGTGCGCCGACTATCCCTCATCAAGTACCAGTAGGTTCTaGTCATCAATGTGGTCCTCC +
Preference number: 2 (lower is better)
Translates to: DRTDGPGGHQGCADYPSSSTSRF*SSMWSS
Trigger: GGAGGACCACATTGATGACCAGAACCTACTGGTACT...TGATGAGGGATAGTCGGCGCACCCCTGATGGCCACCCGGTCCGTCAGTCCTATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CCA 90 bp CTGGATATACCTCCTGATGTCATTCAGGAGGGTGAGGGAAGATGGGCTAGGGGTGCCCTTCTGACCCCATaGGGGCCTTCCCTATCCCAT +
Preference number: 2 (lower is better)
Translates to: LDIPPDVIQEGEGRWARGALLTP*GPSLSH
Trigger: ATGGGATAGGGAAGGCCCCCATGGGGTCAGAAGGGC...ACCCCTAGCCCATCTTCCCTCACCCTCCTGAATGACATCAGGAGGTATATCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR CCA 90 bp GACCGGGTGGCCATCAGGGGTGCGCCGACTATCCCTCATCAGATACACACAGTCTGGACTGGAAGAAGGTaGTGCAGAGGCAGTTGCAAT +
Preference number: 2 (lower is better)
Translates to: DRVAIRGAPTIPHQIHTVWTGRR*CRGSCN
Trigger: ATTGCAACTGCCTCTGCACCACCTTCTTCCAGTCCA...GACTGTGTGTATCTGATGAGGGATAGTCGGCGCACCCCTGATGGCCACCCGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CCA 90 bp TGCGCCGACTATCCCTCATCAGATACACACAGTCACCCTGACGAAGCAGCAAGTGCTGTGGCTACGGCCTaGACTGGAAGAAGGTGGTGC +
Preference number: 2 (lower is better)
Translates to: CADYPSSDTHSHPDEAASAVATA*TGRRWC
Trigger: GCACCACCTTCTTCCAGTCCAGGCCGTAGCCACAGC...ACTTGCTGCTTCGTCAGGGTGACTGTGTGTATCTGATGAGGGATAGTCGGCGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CCA 90 bp CACAGCCAGGTTGGGCATAGTGGGGCCGAGGGATCATGGGAACCTCCCTGTCCATTTGGGTCACAGCTATaGTTGATGAATCGGGCCTCA +
Preference number: 2 (lower is better)
Translates to: HSQVGHSGAEGSWEPPCPFGSQL*LMNRAS
Trigger: TGAGGCCCGATTCATCAACCATAGCTGTGACCCAAA...TGGACAGGGAGGTTCCCATGATCCCTCGGCCCCACTATGCCCAACCTGGCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR GCA 90 bp CCGGGTGGCCATCAGGGGTGCGCCGACTATCCCTCATCAGATACACACAGTCACGTGGGGTGGGGCAAATaGTATAAAGTACCAGTAGGT +
Preference number: 2 (lower is better)
Translates to: PGGHQGCADYPSSDTHSHVGWGK*YKVPVG
Trigger: ACCTACTGGTACTTTATAGCATTTGCCCCACCCCAC...GTGACTGTGTGTATCTGATGAGGGATAGTCGGCGCACCCCTGATGGCCACCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR GCA 90 bp GAGCAGGAGGCAGGACTGATTAGCTCCACTGGATCCCAGATGCTTGAGGTTCTCTTGCAAGAACTACCGTaGCCTTCTGACCCCATGGGG +
Preference number: 2 (lower is better)
Translates to: EQEAGLISSTGSQMLEVLLQELP*PSDPMG
Trigger: CCCCATGGGGTCAGAAGGGCACGGTAGTTCTTGCAA...GAGAACCTCAAGCATCTGGGATCCAGTGGAGCTAATCAGTCCTGCCTCCTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR GCA 90 bp CTGGATATACCTCCTGATGTCATTCAGGAGGGTGAGGGAAGATGGGCTAGGGGTGTGTCAGGACTGAGGTaGAGTGCTGCTCCTTCCTCG +
Preference number: 2 (lower is better)
Translates to: LDIPPDVIQEGEGRWARGVSGLR*SAAPSS
Trigger: CGAGGAAGGAGCAGCACTGCACCTCAGTCCTGACAC...ACCCCTAGCCCATCTTCCCTCACCCTCCTGAATGACATCAGGAGGTATATCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CCA 90 bp CCGGGTGGCCATCAGGGGTGCGCCGACTATCCCTCATCAGATACACACAGTCACCTCTGGGGTAGCTCTTaGAGCCAACAGAGAATAGAT +
Preference number: 2 (lower is better)
Translates to: PGGHQGCADYPSSDTHSHLWGSS*SQQRID
Trigger: ATCTATTCTCTGTTGGCTCCAAGAGCTACCCCAGAG...GTGACTGTGTGTATCTGATGAGGGATAGTCGGCGCACCCCTGATGGCCACCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CCA 90 bp CTAATGTCAACAACATGGCCCCATTCCCCTTGCCCAGATGGACCCTTCCCACCCGAGGGTGAGGGAAGATaGGCTAGGGGTGAAGAGAAA +
Preference number: 2 (lower is better)
Translates to: LMSTTWPHSPCPDGPFPPEGEGR*ARGEEK
Trigger: TTTCTCTTCACCCCTAGCCCATCTTCCCTCACCCTC...GGGTGGGAAGGGTCCATCTGGGCAAGGGGAATGGGGCCATGTTGTTGACATTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR CCA 90 bp CCGGGTGGCCATCAGGGGTGCGCCGACTATCCCTCATCAGATACACACAGTCACTTTGGGTCACAGCTATaGTTGATGAATCGGGCCTCA +
Preference number: 2 (lower is better)
Translates to: PGGHQGCADYPSSDTHSHFGSQL*LMNRAS
Trigger: TGAGGCCCGATTCATCAACCATAGCTGTGACCCAAA...GTGACTGTGTGTATCTGATGAGGGATAGTCGGCGCACCCCTGATGGCCACCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CCA 90 bp GAGCAGGAGGCAGGACTGATTAGCTCCACTGGATCCCAGATGCTTGAGGTTCTCGGGAAGGTTCAAAAGTaGAGCTGCCAGTGCTTGCCG +
Preference number: 2 (lower is better)
Translates to: EQEAGLISSTGSQMLEVLGKVQK*SCQCLP
Trigger: CGGCAAGCACTGGCAGCTCCACTTTTGAACCTTCCC...GAGAACCTCAAGCATCTGGGATCCAGTGGAGCTAATCAGTCCTGCCTCCTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CCA 90 bp GATAGGACTGACGGACCGGGTGGCCATCAGGGGTGCGCCGACTATCCCTCATCAAACATCTCTCCCAACTaGGGATTTACGCCCATAGTA +
Preference number: 2 (lower is better)
Translates to: DRTDGPGGHQGCADYPSSNISPN*GFTPIV
Trigger: TACTATGGGCGTAAATCCCCAGTTGGGAGAGATGTT...TGATGAGGGATAGTCGGCGCACCCCTGATGGCCACCCGGTCCGTCAGTCCTATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR CAA 90 bp CAGCAAGTCATCTCGGAGCAAACAGATGAAGTAGACACAGCCAGGTaGGGCATAGTGGGGCCGAGGGATCATGGGAACCTCCTGAGACTT +
Preference number: 2 (lower is better)
Translates to: QQVISEQTDEVDTAR*GIVGPRDHGNLLRL
Trigger: AAGTCTCAGGAGGTTCCCATGATCCCTCGGCCCCACTATGCCCAACCTGGCTGTGTCTACTTCATCTGTTTGCTCCGAGATGACTTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492987.2
3UTR CAA 90 bp CTGCCCGAGCCACTTCAATATTTTCCTCTGCAGCTGCCAACCGTCTaGTTCGAACAGATCGAGCTGTCTGCAGGGCAGAGAACTGGGTCA +
Preference number: 2 (lower is better)
Translates to: LPEPLQYFPLQLPTV*FEQIELSAGQRTGS
Trigger: TGACCCAGTTCTCTGCCCTGCAGACAGCTCGATCTGTTCGAACAAGACGGTTGGCAGCTGCAGAGGAAAATATTGAAGTGGCTCGGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR TCA 90 bp TCTGTGTTTGTGACGGTGCCTGTGTTTGTGCTCAACCATCCAACCATAGGCCATGCCTTAAGCGGTTCCTaGGTGGGGAGCAGTGCTTCG +
Preference number: 2 (lower is better)
Translates to: SVFVTVPVFVLNHPTIGHALSGS*VGSSAS
Trigger: CGAAGCACTGCTCCCCACTCAGGAACCGCTTAAGGC...ATGGCCTATGGTTGGATGGTTGAGCACAAACACAGGCACCGTCACAAACACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR-3UTR TCA 90 bp AGAACCGACGGGATGGAGAGTGGTGTGTTTCGTGGGGACGGAAATAATGGTGACCTCATCAATCTGGGCTaGTGCCTCATGCCGGGCATT +
Preference number: 2 (lower is better)
Translates to: RTDGMESGVFRGDGNNGDLINLG*CLMPGI
Trigger: AATGCCCGGCATGAGGCATCAGCCCAGATTGATGAG...GTCACCATTATTTCCGTCCCCACGAAACACACCACTCTCCATCCCGTCGGTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR GCA 90 bp GAGCAGGAGGCAGGACTGATTAGCTCCACTGGATCCCAGATGCTTGAGGTTCTCGCAGCTTCTTCGCAATaGCTGTGGGATCTGAGGATG +
Preference number: 2 (lower is better)
Translates to: EQEAGLISSTGSQMLEVLAASSQ*LWDLRM
Trigger: CATCCTCAGATCCCACAGGCATTGCGAAGAAGCTGC...GAGAACCTCAAGCATCTGGGATCCAGTGGAGCTAATCAGTCCTGCCTCCTGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR GCA 90 bp GGGCATTGTAATAGGCCTTTCGTAGACGACAAACATCTCTCCCAACTGGGGATTCCAGGGTTCGGTCCTTaGTGTGGCTACGGCCTGGAC +
Preference number: 2 (lower is better)
Translates to: GHCNRPFVDDKHLSQLGIPGFGP*CGYGLD
Trigger: GTCCAGGCCGTAGCCACAGCAAGGACCGAACCCTGG...AATCCCCAGTTGGGAGAGATGTTTGTCGTCTACGAAAGGCCTATTACAATGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR GCA 90 bp CTGGATATACCTCCTGATGTCATTCAGGAGGGTGAGGGAAGATGGGCTAGGGGTACAGATCGAGCTGTCTaGAGGGCAGAGAACTGGGTC +
Preference number: 2 (lower is better)
Translates to: LDIPPDVIQEGEGRWARGTDRAV*RAENWV
Trigger: GACCCAGTTCTCTGCCCTGCAGACAGCTCGATCTGT...ACCCCTAGCCCATCTTCCCTCACCCTCCTGAATGACATCAGGAGGTATATCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CCA 90 bp CTAATGTCAACAACATGGCCCCATTCCCCTTGCCCAGATGGACCCTTCCCACCCCCCATGATTCCATTTTaGGGAGTAGAGGTAGGGAGG +
Preference number: 2 (lower is better)
Translates to: LMSTTWPHSPCPDGPFPPPMIPF*GVEVGR
Trigger: CCTCCCTACCTCTACTCCCCAAAATGGAATCATGGG...GGGTGGGAAGGGTCCATCTGGGCAAGGGGAATGGGGCCATGTTGTTGACATTAG
54% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR CCA 90 bp TGGCTAGAACCTCTTCAATCAAGGGTAGAGCATCATCCTCCTGGCCCAAGTCTTGCCCTTCTGACCCCATaGGGGCCTTCCCTATCCCAT +
Preference number: 2 (lower is better)
Translates to: WLEPLQSRVEHHPPGPSLALLTP*GPSLSH
Trigger: ATGGGATAGGGAAGGCCCCCATGGGGTCAGAAGGGC...AAGACTTGGGCCAGGAGGATGATGCTCTACCCTTGATTGAAGAGGTTCTAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CCA 90 bp CTAATGTCAACAACATGGCCCCATTCCCCTTGCCCAGATGGACCCTTCCCACCCCCACTCAAACGGGCTTaGACATGCGATTTTTCCAGC +
Preference number: 2 (lower is better)
Translates to: LMSTTWPHSPCPDGPFPPPLKRA*TCDFSS
Trigger: GCTGGAAAAATCGCATGTCCAAGCCCGTTTGAGTGG...GGGTGGGAAGGGTCCATCTGGGCAAGGGGAATGGGGCCATGTTGTTGACATTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR CCA 90 bp GCTGTCTGCAGGGCAGAGAACTGGGTCATGAAGACATCAGACTTGATATTCCCAGGCTACGGCCTGGACTaGAAGAAGGTGGTGCAGAGG +
Preference number: 2 (lower is better)
Translates to: AVCRAENWVMKTSDLIFPGYGLD*KKVVQR
Trigger: CCTCTGCACCACCTTCTTCCAGTCCAGGCCGTAGCC...TGGGAATATCAAGTCTGATGTCTTCATGACCCAGTTCTCTGCCCTGCAGACAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CCA 90 bp CTAATGTCAACAACATGGCCCCATTCCCCTTGCCCAGATGGACCCTTCCCACCCGGTTCCTCAGAGAGATaGCCTCTCCTTTTCTTCAGC +
Preference number: 2 (lower is better)
Translates to: LMSTTWPHSPCPDGPFPPGSSER*PLLFFS
Trigger: GCTGAAGAAAAGGAGAGGCCATCTCTCTGAGGAACC...GGGTGGGAAGGGTCCATCTGGGCAAGGGGAATGGGGCCATGTTGTTGACATTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CCA 90 bp CCGGGTGGCCATCAGGGGTGCGCCGACTATCCCTCATCAGATACACACAGTCACATGCACTTGTCACACTaGATCATGAGACCTTCATCC +
Preference number: 2 (lower is better)
Translates to: PGGHQGCADYPSSDTHSHMHLSH*IMRPSS
Trigger: GGATGAAGGTCTCATGATCCAGTGTGACAAGTGCAT...GTGACTGTGTGTATCTGATGAGGGATAGTCGGCGCACCCCTGATGGCCACCCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CCA 90 bp CTAATGTCAACAACATGGCCCCATTCCCCTTGCCCAGATGGACCCTTCCCACCCTTGAGTCGTTCCCGTTaGTTATGCCGTCGTTCCTCA +
Preference number: 2 (lower is better)
Translates to: LMSTTWPHSPCPDGPFPPLSRSR*LCRRSS
Trigger: TGAGGAACGACGGCATAACCAACGGGAACGACTCAA...GGGTGGGAAGGGTCCATCTGGGCAAGGGGAATGGGGCCATGTTGTTGACATTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR CAA 90 bp TGCTGTGGCTACGGCCTGGACTGGAAGAAGGTGGTGCAGAGGCAGTaGCAATCACAGCATCAATACTTTTCTCCATGGGCTCTTGGTCCT +
Preference number: 2 (lower is better)
Translates to: CCGYGLDWKKVVQRQ*QSQHQYFSPWALGP
Trigger: AGGACCAAGAGCCCATGGAGAAAAGTATTGATGCTGTGATTGCAACTGCCTCTGCACCACCTTCTTCCAGTCCAGGCCGTAGCCACAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR CAA 90 bp AGGGTAGAGCATCATCCTCCTGGCCCAAGTCTTTTAGGGGTGGCTTaGAGCGCTCAGACTTCCAGGATGATCGTCCTCCATTCCTCTTGT +
Preference number: 2 (lower is better)
Translates to: RVEHHPPGPSLLGVA*SAQTSRMIVLHSSC
Trigger: ACAAGAGGAATGGAGGACGATCATCCTGGAAGTCTGAGCGCTCAAAGCCACCCCTAAAAGACTTGGGCCAGGAGGATGATGCTCTACCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR TCA 90 bp CTAATGTCAACAACATGGCCCCATTCCCCTTGCCCAGATGGACCCTTCCCACCCTTCCAGCTCCACATGTaGGTATCTTATACCCAGGTC +
Preference number: 2 (lower is better)
Translates to: LMSTTWPHSPCPDGPFPPFQLHM*VSYTQV
Trigger: GACCTGGGTATAAGATACTCACATGTGGAGCTGGAA...GGGTGGGAAGGGTCCATCTGGGCAAGGGGAATGGGGCCATGTTGTTGACATTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR TCA 90 bp CACAGCCAGGTTGGGCATAGTGGGGCCGAGGGATCATGGGAACCTCCCTGTCCAAGATACTTTCCAACATaGATGGGCGCTGGAAATAAT +
Preference number: 2 (lower is better)
Translates to: HSQVGHSGAEGSWEPPCPRYFPT*MGAGNN
Trigger: ATTATTTCCAGCGCCCATTCATGTTGGAAAGTATCT...TGGACAGGGAGGTTCCCATGATCCCTCGGCCCCACTATGCCCAACCTGGCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR TCA 90 bp GTAGACACAGCCAGGTTGGGCATAGTGGGGCCGAGGGATCATGGGAACCTCCCTCAAAGATCATTCTATTaGGGCAGTCATCAACACAGC +
Preference number: 2 (lower is better)
Translates to: VDTARLGIVGPRDHGNLPQRSFY*GSHQHS
Trigger: GCTGTGTTGATGACTGCCTCAATAGAATGATCTTTG...AGGGAGGTTCCCATGATCCCTCGGCCCCACTATGCCCAACCTGGCTGTGTCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR GCA 90 bp TGGGGTAGGAATAGGGATCCTGGCCCTATCCCTTTGGATTTTGAGTTATACCTGTGGCCCCATTCCCCTTaGCCAGATGGACCCTTCCCA +
Preference number: 2 (lower is better)
Translates to: WGRNRDPGPIPLDFELYLWPHSP*PDGPFP
Trigger: TGGGAAGGGTCCATCTGGGCAAGGGGAATGGGGCCA...CAGGTATAACTCAAAATCCAAAGGGATAGGGCCAGGATCCCTATTCCTACCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR GCA 90 bp GCTCCAAGGCTTATTAAGTACCTAATGTCAACAACATGGCCCCATTCCCCTTGCTGGCCCCATTCCCCTTaGCCAGATGGACCCTTCCCA +
Preference number: 2 (lower is better)
Translates to: APRLIKYLMSTTWPHSPCWPHSP*PDGPFP
Trigger: TGGGAAGGGTCCATCTGGGCAAGGGGAATGGGGCCA...GCAAGGGGAATGGGGCCATGTTGTTGACATTAGGTACTTAATAAGCCTTGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR GCA 90 bp CTAATGTCAACAACATGGCCCCATTCCCCTTGCCCAGATGGACCCTTCCCACCCGGCAGCAGTTACAAGTaGTTTGAGCTGTCAACTCAC +
Preference number: 2 (lower is better)
Translates to: LMSTTWPHSPCPDGPFPPGSSYK*FELSTH
Trigger: GTGAGTTGACAGCTCAAAGCACTTGTAACTGCTGCC...GGGTGGGAAGGGTCCATCTGGGCAAGGGGAATGGGGCCATGTTGTTGACATTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR GCA 90 bp GGTTGGGCAAGAAAGGAGAGACAAACTTCCCTAGTCAGGTATCTAGGAAGAAGCGGTGGCCATCAGGGGTaGGCCGACTATCCCTCATCA +
Preference number: 2 (lower is better)
Translates to: GWARKERQTSLVRYLGRSGGHQG*ADYPSS
Trigger: TGATGAGGGATAGTCGGCGCACCCCTGATGGCCACC...GCTTCTTCCTAGATACCTGACTAGGGAAGTTTGTCTCTCCTTTCTTGCCCAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR GCA 90 bp CCACAGATACAGCGAATAACATCGTCGTCCTTCTCATGCCCATTCTCCTTTTCACCAGGGTTCGGTCCTTaGTGTGGCTACGGCCTGGAC +
Preference number: 2 (lower is better)
Translates to: PQIQRITSSSFSCPFSFSPGFGP*CGYGLD
Trigger: GTCCAGGCCGTAGCCACAGCAAGGACCGAACCCTGG...TGAAAAGGAGAATGGGCATGAGAAGGACGACGATGTTATTCGCTGTATCTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR GCA 90 bp ACACACAAGAACTACAGCGCATTAAAAACAGCATGTGTGCTGGCGGGGGCCTGGGTTCAAAAGTGGAGCTaGCAGTGCTTGCCGGGAAGA +
Preference number: 2 (lower is better)
Translates to: THKNYSALKTACVLAGAWVQKWS*QCLPGR
Trigger: TCTTCCCGGCAAGCACTGGCAGCTCCACTTTTGAAC...CCAGGCCCCCGCCAGCACACATGCTGTTTTTAATGCGCTGTAGTTCTTGTGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CCA 90 bp CTAATGTCAACAACATGGCCCCATTCCCCTTGCCCAGATGGACCCTTCCCACCCTTCTGGTCATCAATGTaGTCCTCCCTCCTCTCTACA +
Preference number: 2 (lower is better)
Translates to: LMSTTWPHSPCPDGPFPPFWSSM*SSLLST
Trigger: TGTAGAGAGGAGGGAGGACCACATTGATGACCAGAA...GGGTGGGAAGGGTCCATCTGGGCAAGGGGAATGGGGCCATGTTGTTGACATTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR CCA 90 bp GCAGGTCCCCACTACAGCCTCCAAGGGAATGATCTCATAGAGTGGCACCCGAAACCCATGATTCCATTTTaGGGAGTAGAGGTAGGGAGG +
Preference number: 2 (lower is better)
Translates to: AGPHYSLQGNDLIEWHPKPMIPF*GVEVGR
Trigger: CCTCCCTACCTCTACTCCCCAAAATGGAATCATGGG...TTTCGGGTGCCACTCTATGAGATCATTCCCTTGGAGGCTGTAGTGGGGACCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CCA 90 bp GAGCAGGAGGCAGGACTGATTAGCTCCACTGGATCCCAGATGCTTGAGGTTCTCCCCATGATTCCATTTTaGGGAGTAGAGGTAGGGAGG +
Preference number: 2 (lower is better)
Translates to: EQEAGLISSTGSQMLEVLPMIPF*GVEVGR
Trigger: CCTCCCTACCTCTACTCCCCAAAATGGAATCATGGG...GAGAACCTCAAGCATCTGGGATCCAGTGGAGCTAATCAGTCCTGCCTCCTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR CCA 90 bp CTGGATATACCTCCTGATGTCATTCAGGAGGGTGAGGGAAGATGGGCTAGGGGTGAGGGTGAGGGAAGATaGGCTAGGGGTGAAGAGAAA +
Preference number: 2 (lower is better)
Translates to: LDIPPDVIQEGEGRWARGEGEGR*ARGEEK
Trigger: TTTCTCTTCACCCCTAGCCCATCTTCCCTCACCCTC...ACCCCTAGCCCATCTTCCCTCACCCTCCTGAATGACATCAGGAGGTATATCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR CCA 90 bp GAGCAGGAGGCAGGACTGATTAGCTCCACTGGATCCCAGATGCTTGAGGTTCTCCCACTCAAACGGGCTTaGACATGCGATTTTTCCAGC +
Preference number: 2 (lower is better)
Translates to: EQEAGLISSTGSQMLEVLPLKRA*TCDFSS
Trigger: GCTGGAAAAATCGCATGTCCAAGCCCGTTTGAGTGG...GAGAACCTCAAGCATCTGGGATCCAGTGGAGCTAATCAGTCCTGCCTCCTGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR CCA 90 bp ACACACAAGAACTACAGCGCATTAAAAACAGCATGTGTGCTGGCGGGGGCCTGGAACCCGCCTGGCAGCTaGGGGGTTCTTTTTATTTCG +
Preference number: 2 (lower is better)
Translates to: THKNYSALKTACVLAGAWNPPGS*GVLFIS
Trigger: CGAAATAAAAAGAACCCCCCAGCTGCCAGGCGGGTT...CCAGGCCCCCGCCAGCACACATGCTGTTTTTAATGCGCTGTAGTTCTTGTGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR CCA 90 bp GCTGTCTGCAGGGCAGAGAACTGGGTCATGAAGACATCAGACTTGATATTCCCAGTTCGGTCCTTGCTGTaGCTACGGCCTGGACTGGAA +
Preference number: 2 (lower is better)
Translates to: AVCRAENWVMKTSDLIFPVRSLL*LRPGLE
Trigger: TTCCAGTCCAGGCCGTAGCCACAGCAAGGACCGAAC...TGGGAATATCAAGTCTGATGTCTTCATGACCCAGTTCTCTGCCCTGCAGACAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CCA 90 bp CTAATGTCAACAACATGGCCCCATTCCCCTTGCCCAGATGGACCCTTCCCACCCCACATTTTCCGAGCTTaGCGTTGCATAGCTTCCACT +
Preference number: 2 (lower is better)
Translates to: LMSTTWPHSPCPDGPFPPHIFRA*RCIAST
Trigger: AGTGGAAGCTATGCAACGCCAAGCTCGGAAAATGTG...GGGTGGGAAGGGTCCATCTGGGCAAGGGGAATGGGGCCATGTTGTTGACATTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CCA 90 bp GTAGACACAGCCAGGTTGGGCATAGTGGGGCCGAGGGATCATGGGAACCTCCCTAGTTATTCCCTGTCCTaGCCTGCCTTTGAAGTTTTT +
Preference number: 2 (lower is better)
Translates to: VDTARLGIVGPRDHGNLPSYSLS*PAFEVF
Trigger: AAAAACTTCAAAGGCAGGCCAGGACAGGGAATAACT...AGGGAGGTTCCCATGATCCCTCGGCCCCACTATGCCCAACCTGGCTGTGTCTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CCA 90 bp GCCTCTGTATCCTCTGGTTACAGCATTGCTCGCCACATGGGCAAGTGTTGGGGGTTTCCGAGGTCGACCTaGCCTACGTTTCACAAAGTT +
Preference number: 2 (lower is better)
Translates to: ASVSSGYSIARHMGKCWGFPRST*PTFHKV
Trigger: AACTTTGTGAAACGTAGGCCAGGTCGACCTCGGAAA...CCCCCAACACTTGCCCATGTGGCGAGCAATGCTGTAACCAGAGGATACAGAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CCA 90 bp GAGCAAACAGATGAAGTAGACACAGCCAGGTTGGGCATAGTGGGGCCGAGGGATGGTTCCTCAGAGAGATaGCCTCTCCTTTTCTTCAGC +
Preference number: 2 (lower is better)
Translates to: EQTDEVDTARLGIVGPRDGSSER*PLLFFS
Trigger: GCTGAAGAAAAGGAGAGGCCATCTCTCTGAGGAACC...ATCCCTCGGCCCCACTATGCCCAACCTGGCTGTGTCTACTTCATCTGTTTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CCA 90 bp GAGCAAACAGATGAAGTAGACACAGCCAGGTTGGGCATAGTGGGGCCGAGGGATTGCAGGGCAGAGAACTaGGTCATGAAGACATCAGAC +
Preference number: 2 (lower is better)
Translates to: EQTDEVDTARLGIVGPRDCRAEN*VMKTSD
Trigger: GTCTGATGTCTTCATGACCCAGTTCTCTGCCCTGCA...ATCCCTCGGCCCCACTATGCCCAACCTGGCTGTGTCTACTTCATCTGTTTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR CAA 90 bp TTCCAGGACAGATCGGGAAGAGCCAGTGTCCATAGAAACCTGGGGTaGTTCAGAAGAACGGTGTTCTCTGTGTTTGTGACGGTGCCTGTG +
Preference number: 2 (lower is better)
Translates to: FQDRSGRASVHRNLG*FRRTVFSVFVTVPV
Trigger: CACAGGCACCGTCACAAACACAGAGAACACCGTTCTTCTGAACAACCCCAGGTTTCTATGGACACTGGCTCTTCCCGATCTGTCCTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR-3UTR TCA 90 bp GCTCCAAGGCTTATTAAGTACCTAATGTCAACAACATGGCCCCATTCCCCTTGCAGCAGGAGGCAGGACTaGTTAGCTCCACTGGATCCC +
Preference number: 2 (lower is better)
Translates to: APRLIKYLMSTTWPHSPCSRRQD*LAPLDP
Trigger: GGGATCCAGTGGAGCTAATCAGTCCTGCCTCCTGCT...GCAAGGGGAATGGGGCCATGTTGTTGACATTAGGTACTTAATAAGCCTTGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR GCA 90 bp GACATGCAGACTAACTCTGTATCTATTTGCAGTGATGTAGTGCTTTGCCCCGCATGGCCCCATTCCCCTTaGCCAGATGGACCCTTCCCA +
Preference number: 2 (lower is better)
Translates to: DMQTNSVSICSDVVLCPAWPHSP*PDGPFP
Trigger: TGGGAAGGGTCCATCTGGGCAAGGGGAATGGGGCCA...TGCGGGGCAAAGCACTACATCACTGCAAATAGATACAGAGTTAGTCTGCATGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR GCA 90 bp ATATTTTCACTGGGTTCCTCAGAGAGATGGCCTCTCCTTTTCTTCAGCTTGTGCTGGCCCCATTCCCCTTaGCCAGATGGACCCTTCCCA +
Preference number: 2 (lower is better)
Translates to: IFSLGSSERWPLLFFSLCWPHSP*PDGPFP
Trigger: TGGGAAGGGTCCATCTGGGCAAGGGGAATGGGGCCA...GCACAAGCTGAAGAAAAGGAGAGGCCATCTCTCTGAGGAACCCAGTGAAAATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR GCA 90 bp ACTTTGACCTGGTTGGGCAAGAAAGGAGAGACAAACTTCCCTAGTCAGGTATCTTGGCCCCATTCCCCTTaGCCAGATGGACCCTTCCCA +
Preference number: 2 (lower is better)
Translates to: TLTWLGKKGETNFPSQVSWPHSP*PDGPFP
Trigger: TGGGAAGGGTCCATCTGGGCAAGGGGAATGGGGCCA...AGATACCTGACTAGGGAAGTTTGTCTCTCCTTTCTTGCCCAACCAGGTCAAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR GCA 90 bp GAGCAGGAGGCAGGACTGATTAGCTCCACTGGATCCCAGATGCTTGAGGTTCTCAAACGGGCTTGGACATaGGATTTTTCCAGCTCCACA +
Preference number: 2 (lower is better)
Translates to: EQEAGLISSTGSQMLEVLKRAWT*DFSSST
Trigger: TGTGGAGCTGGAAAAATCGCATGTCCAAGCCCGTTT...GAGAACCTCAAGCATCTGGGATCCAGTGGAGCTAATCAGTCCTGCCTCCTGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR GCA 90 bp CAGTATAGTCTGTTAACTTCTGGTCAAGAGAGTAGGAAGGAAGGAGACACCCTGGGTGGCCATCAGGGGTaGGCCGACTATCCCTCATCA +
Preference number: 2 (lower is better)
Translates to: QYSLLTSGQESRKEGDTLGGHQG*ADYPSS
Trigger: TGATGAGGGATAGTCGGCGCACCCCTGATGGCCACC...CAGGGTGTCTCCTTCCTTCCTACTCTCTTGACCAGAAGTTAACAGACTATACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR GCA 90 bp CTGGATATACCTCCTGATGTCATTCAGGAGGGTGAGGGAAGATGGGCTAGGGGTAAGCATAGGGTTTGGTaGAGACAGGATAGCGGTTCC +
Preference number: 2 (lower is better)
Translates to: LDIPPDVIQEGEGRWARGKHRVW*RQDSGS
Trigger: GGAACCGCTATCCTGTCTGCACCAAACCCTATGCTT...ACCCCTAGCCCATCTTCCCTCACCCTCCTGAATGACATCAGGAGGTATATCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CCA 90 bp GAGCAAACAGATGAAGTAGACACAGCCAGGTTGGGCATAGTGGGGCCGAGGGATTCTTCGCAATGCCTGTaGGATCTGAGGATGACAGAA +
Preference number: 2 (lower is better)
Translates to: EQTDEVDTARLGIVGPRDSSQCL*DLRMTE
Trigger: TTCTGTCATCCTCAGATCCCACAGGCATTGCGAAGA...ATCCCTCGGCCCCACTATGCCCAACCTGGCTGTGTCTACTTCATCTGTTTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CCA 90 bp GGTGCGCCGACTATCCCTCATCAGATACACACAGTCACCCTGACGAAGCAGCAATCTTCGCAATGCCTGTaGGATCTGAGGATGACAGAA +
Preference number: 2 (lower is better)
Translates to: GAPTIPHQIHTVTLTKQQSSQCL*DLRMTE
Trigger: TTCTGTCATCCTCAGATCCCACAGGCATTGCGAAGA...TTGCTGCTTCGTCAGGGTGACTGTGTGTATCTGATGAGGGATAGTCGGCGCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CCA 90 bp GAGCAGGAGGCAGGACTGATTAGCTCCACTGGATCCCAGATGCTTGAGGTTCTCCTCTGGGGTAGCTCTTaGAGCCAACAGAGAATAGAT +
Preference number: 2 (lower is better)
Translates to: EQEAGLISSTGSQMLEVLLWGSS*SQQRID
Trigger: ATCTATTCTCTGTTGGCTCCAAGAGCTACCCCAGAG...GAGAACCTCAAGCATCTGGGATCCAGTGGAGCTAATCAGTCCTGCCTCCTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR CCA 90 bp CTGGATATACCTCCTGATGTCATTCAGGAGGGTGAGGGAAGATGGGCTAGGGGTCCCATGATTCCATTTTaGGGAGTAGAGGTAGGGAGG +
Preference number: 2 (lower is better)
Translates to: LDIPPDVIQEGEGRWARGPMIPF*GVEVGR
Trigger: CCTCCCTACCTCTACTCCCCAAAATGGAATCATGGG...ACCCCTAGCCCATCTTCCCTCACCCTCCTGAATGACATCAGGAGGTATATCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR CCA 90 bp AAACGGGCTTGGACATGCGATTTTTCCAGCTCCACATGTGAGTATCTTATACCCGCCCTTCTGACCCCATaGGGGCCTTCCCTATCCCAT +
Preference number: 2 (lower is better)
Translates to: KRAWTCDFSSSTCEYLIPALLTP*GPSLSH
Trigger: ATGGGATAGGGAAGGCCCCCATGGGGTCAGAAGGGC...GGGTATAAGATACTCACATGTGGAGCTGGAAAAATCGCATGTCCAAGCCCGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR CCA 90 bp GAGCAGGAGGCAGGACTGATTAGCTCCACTGGATCCCAGATGCTTGAGGTTCTCAGGAAGGAGACACCCTaGATATACCTCCTGATGTCA +
Preference number: 2 (lower is better)
Translates to: EQEAGLISSTGSQMLEVLRKETP*IYLLMS
Trigger: TGACATCAGGAGGTATATCCAGGGTGTCTCCTTCCT...GAGAACCTCAAGCATCTGGGATCCAGTGGAGCTAATCAGTCCTGCCTCCTGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR CCA 90 bp TGTGAGATAACAGTCGATAGGACTGACGGACCGGGTGGCCATCAGGGGTGCGCCCAATACTTTTCTCCATaGGCTCTTGGTCCTCATTTT +
Preference number: 2 (lower is better)
Translates to: CEITVDRTDGPGGHQGCAQYFSP*ALGPHF
Trigger: AAAATGAGGACCAAGAGCCCATGGAGAAAAGTATTG...GGCGCACCCCTGATGGCCACCCGGTCCGTCAGTCCTATCGACTGTTATCTCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CCA 90 bp ACACACAAGAACTACAGCGCATTAAAAACAGCATGTGTGCTGGCGGGGGCCTGGTGGACTGGAAGAAGGTaGTGCAGAGGCAGTTGCAAT +
Preference number: 2 (lower is better)
Translates to: THKNYSALKTACVLAGAWWTGRR*CRGSCN
Trigger: ATTGCAACTGCCTCTGCACCACCTTCTTCCAGTCCA...CCAGGCCCCCGCCAGCACACATGCTGTTTTTAATGCGCTGTAGTTCTTGTGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CCA 90 bp GGTTGGGCAAGAAAGGAGAGACAAACTTCCCTAGTCAGGTATCTAGGAAGAAGCGTTCGGTCCTTGCTGTaGCTACGGCCTGGACTGGAA +
Preference number: 2 (lower is better)
Translates to: GWARKERQTSLVRYLGRSVRSLL*LRPGLE
Trigger: TTCCAGTCCAGGCCGTAGCCACAGCAAGGACCGAAC...GCTTCTTCCTAGATACCTGACTAGGGAAGTTTGTCTCTCCTTTCTTGCCCAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CCA 90 bp GATCAAAAGCATAGGGTTTGGTGCAGACAGGATAGCGGTTCCGGTGGATCTTGTGCATTGCTCGCCACATaGGCAAGTGTTGGGGGAACA +
Preference number: 2 (lower is better)
Translates to: DQKHRVWCRQDSGSGGSCALLAT*ASVGGT
Trigger: TGTTCCCCCAACACTTGCCCATGTGGCGAGCAATGC...ACAAGATCCACCGGAACCGCTATCCTGTCTGCACCAAACCCTATGCTTTTGATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CCA 90 bp GCACAGCAGACACACAAGAACTACAGCGCATTAAAAACAGCATGTGTGCTGGCGTGTGTGGCCATGGGCTaGCTGTTTTTGCTGCTGGTG +
Preference number: 2 (lower is better)
Translates to: AQQTHKNYSALKTACVLACVAMG*LFLLLV
Trigger: CACCAGCAGCAAAAACAGCCAGCCCATGGCCACACA...CGCCAGCACACATGCTGTTTTTAATGCGCTGTAGTTCTTGTGTGTCTGCTGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CCA 90 bp CTGGATATACCTCCTGATGTCATTCAGGAGGGTGAGGGAAGATGGGCTAGGGGTTTTTGTGTGTGGCCATaGGCTGGCTGTTTTTGCTGC +
Preference number: 2 (lower is better)
Translates to: LDIPPDVIQEGEGRWARGFCVWP*AGCFCC
Trigger: GCAGCAAAAACAGCCAGCCCATGGCCACACACAAAA...ACCCCTAGCCCATCTTCCCTCACCCTCCTGAATGACATCAGGAGGTATATCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR TCA 90 bp AAACGGGCTTGGACATGCGATTTTTCCAGCTCCACATGTGAGTATCTTATACCCAGCAGGAGGCAGGACTaGTTAGCTCCACTGGATCCC +
Preference number: 2 (lower is better)
Translates to: KRAWTCDFSSSTCEYLIPSRRQD*LAPLDP
Trigger: GGGATCCAGTGGAGCTAATCAGTCCTGCCTCCTGCT...GGGTATAAGATACTCACATGTGGAGCTGGAAAAATCGCATGTCCAAGCCCGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR TCA 90 bp CTGGGTCATGAAGACATCAGACTTGATATTCCCATCATCTCGGCAGATCCCATTAGCAGGAGGCAGGACTaGTTAGCTCCACTGGATCCC +
Preference number: 2 (lower is better)
Translates to: LGHEDIRLDIPIISADPISRRQD*LAPLDP
Trigger: GGGATCCAGTGGAGCTAATCAGTCCTGCCTCCTGCT...AATGGGATCTGCCGAGATGATGGGAATATCAAGTCTGATGTCTTCATGACCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR TCA 90 bp CTGGATATACCTCCTGATGTCATTCAGGAGGGTGAGGGAAGATGGGCTAGGGGTTTCCAGCTCCACATGTaGGTATCTTATACCCAGGTC +
Preference number: 2 (lower is better)
Translates to: LDIPPDVIQEGEGRWARGFQLHM*VSYTQV
Trigger: GACCTGGGTATAAGATACTCACATGTGGAGCTGGAA...ACCCCTAGCCCATCTTCCCTCACCCTCCTGAATGACATCAGGAGGTATATCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR TCA 90 bp AGAACCGACGGGATGGAGAGTGGTGTGTTTCGTGGGGACGGAAATAATGGTGACTGTATCTATTTGCAGTaGTGTAGTGCTTTGCCCCGC +
Preference number: 2 (lower is better)
Translates to: RTDGMESGVFRGDGNNGDCIYLQ*CSALPR
Trigger: GCGGGGCAAAGCACTACATCACTGCAAATAGATACA...GTCACCATTATTTCCGTCCCCACGAAACACACCACTCTCCATCCCGTCGGTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR TCA 90 bp TGCATCACTACTTACAGGGCTCTGACCTCCACTAGTCCCAGAAGACTGAGAGCAGGTGGCCCTTCCAGTTaGGGCATCTCCTTAGATTTA +
Preference number: 2 (lower is better)
Translates to: CITTYRALTSTSPRRLRAGGPSS*GISLDL
Trigger: TAAATCTAAGGAGATGCCTCAACTGGAAGGGCCACC...TGCTCTCAGTCTTCTGGGACTAGTGGAGGTCAGAGCCCTGTAAGTAGTGATGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR-3UTR TCA 90 bp GCACAGCAGACACACAAGAACTACAGCGCATTAAAAACAGCATGTGTGCTGGCGCTGGAATGCTTGCATTaGTACGACAGCCTGAAGGGG +
Preference number: 2 (lower is better)
Translates to: AQQTHKNYSALKTACVLALECLH*YDSLKG
Trigger: CCCCTTCAGGCTGTCGTATCAATGCAAGCATTCCAG...CGCCAGCACACATGCTGTTTTTAATGCGCTGTAGTTCTTGTGTGTCTGCTGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR TCA 90 bp GTAGACACAGCCAGGTTGGGCATAGTGGGGCCGAGGGATCATGGGAACCTCCCTTTCAGATTTACACTCTaGACAACAGCCTCAATTACA +
Preference number: 2 (lower is better)
Translates to: VDTARLGIVGPRDHGNLPFRFTL*TTASIT
Trigger: TGTAATTGAGGCTGTTGTTCAGAGTGTAAATCTGAA...AGGGAGGTTCCCATGATCCCTCGGCCCCACTATGCCCAACCTGGCTGTGTCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR TCA 90 bp CACAAAGGTAGTGCTCCACATCTGAGTTCACTCCCATACAATCACAGTGCTGCCCTCCTTTTCAGAGACTaGGGTCTCACTGCTGTCTGC +
Preference number: 2 (lower is better)
Translates to: HKGSAPHLSSLPYNHSAALLFRD*GLTAVC
Trigger: GCAGACAGCAGTGAGACCTCAGTCTCTGAAAAGGAG...GGCAGCACTGTGATTGTATGGGAGTGAACTCAGATGTGGAGCACTACCTTTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR GCA 90 bp GCAGGTCCCCACTACAGCCTCCAAGGGAATGATCTCATAGAGTGGCACCCGAAACCACTGGATCCCAGATaGTTGAGGTTCTCATTCTTT +
Preference number: 2 (lower is better)
Translates to: AGPHYSLQGNDLIEWHPKPLDPR*LRFSFF
Trigger: AAAGAATGAGAACCTCAAGCATCTGGGATCCAGTGG...TTTCGGGTGCCACTCTATGAGATCATTCCCTTGGAGGCTGTAGTGGGGACCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR GCA 90 bp AACAAAAGAAACCACTCAAACGGGCTTGGACATGCGATTTTTCCAGCTCCACATTGGCCCCATTCCCCTTaGCCAGATGGACCCTTCCCA +
Preference number: 2 (lower is better)
Translates to: NKRNHSNGLGHAIFPAPHWPHSP*PDGPFP
Trigger: TGGGAAGGGTCCATCTGGGCAAGGGGAATGGGGCCA...ATGTGGAGCTGGAAAAATCGCATGTCCAAGCCCGTTTGAGTGGTTTCTTTTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR GCA 90 bp ACACACAAGAACTACAGCGCATTAAAAACAGCATGTGTGCTGGCGGGGGCCTGGGTGGGGTGGGGCAAATaGTATAAAGTACCAGTAGGT +
Preference number: 2 (lower is better)
Translates to: THKNYSALKTACVLAGAWVGWGK*YKVPVG
Trigger: ACCTACTGGTACTTTATAGCATTTGCCCCACCCCAC...CCAGGCCCCCGCCAGCACACATGCTGTTTTTAATGCGCTGTAGTTCTTGTGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR GCA 90 bp GAGCAGGAGGCAGGACTGATTAGCTCCACTGGATCCCAGATGCTTGAGGTTCTCAGTGATGTAGTGCTTTaGCCCGCATTTCAAACACCA +
Preference number: 2 (lower is better)
Translates to: EQEAGLISSTGSQMLEVLSDVVL*PAFQTP
Trigger: TGGTGTTTGAAATGCGGGGCAAAGCACTACATCACT...GAGAACCTCAAGCATCTGGGATCCAGTGGAGCTAATCAGTCCTGCCTCCTGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR GCA 90 bp ACACACAAGAACTACAGCGCATTAAAAACAGCATGTGTGCTGGCGGGGGCCTGGTTTTGTACCATCCGCTaGAGCAGACTATCCACAGAG +
Preference number: 2 (lower is better)
Translates to: THKNYSALKTACVLAGAWFCTIR*SRLSTE
Trigger: CTCTGTGGATAGTCTGCTGCAGCGGATGGTACAAAA...CCAGGCCCCCGCCAGCACACATGCTGTTTTTAATGCGCTGTAGTTCTTGTGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR GCA 90 bp GTATCCTCTGGTTACAGCATTGCTCGCCACATGGGCAAGTGTTGGGGGAACACTTTCCGAGCTTGGCGTTaGATAGCTTCCACTACACTT +
Preference number: 2 (lower is better)
Translates to: VSSGYSIARHMGKCWGNTFRAWR*IASTTL
Trigger: AAGTGTAGTGGAAGCTATGCAACGCCAAGCTCGGAA...AGTGTTCCCCCAACACTTGCCCATGTGGCGAGCAATGCTGTAACCAGAGGATAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR GCA 90 bp AGCTGTCTGCAGGGCAGAGAACTGGGTCATGAAGACATCAGACTTGATATTCCCCTCTGGTTACAGCATTaGTCGCCACATGGGCAAGTG +
Preference number: 2 (lower is better)
Translates to: SCLQGRELGHEDIRLDIPLWLQH*SPHGQV
Trigger: CACTTGCCCATGTGGCGAGCAATGCTGTAACCAGAG...GGGAATATCAAGTCTGATGTCTTCATGACCCAGTTCTCTGCCCTGCAGACAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR GCA 90 bp CTGGATATACCTCCTGATGTCATTCAGGAGGGTGAGGGAAGATGGGCTAGGGGTAGTGCTGCCATACCATaGACTTGTCACACTGGATCA +
Preference number: 2 (lower is better)
Translates to: LDIPPDVIQEGEGRWARGSAAIP*TCHTGS
Trigger: TGATCCAGTGTGACAAGTGCATGGTATGGCAGCACT...ACCCCTAGCCCATCTTCCCTCACCCTCCTGAATGACATCAGGAGGTATATCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CCA 90 bp ACACACAAGAACTACAGCGCATTAAAAACAGCATGTGTGCTGGCGGGGGCCTGGTCTTCGCAATGCCTGTaGGATCTGAGGATGACAGAA +
Preference number: 2 (lower is better)
Translates to: THKNYSALKTACVLAGAWSSQCL*DLRMTE
Trigger: TTCTGTCATCCTCAGATCCCACAGGCATTGCGAAGA...CCAGGCCCCCGCCAGCACACATGCTGTTTTTAATGCGCTGTAGTTCTTGTGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR CCA 90 bp ACACACAAGAACTACAGCGCATTAAAAACAGCATGTGTGCTGGCGGGGGCCTGGCTCTGGGGTAGCTCTTaGAGCCAACAGAGAATAGAT +
Preference number: 2 (lower is better)
Translates to: THKNYSALKTACVLAGAWLWGSS*SQQRID
Trigger: ATCTATTCTCTGTTGGCTCCAAGAGCTACCCCAGAG...CCAGGCCCCCGCCAGCACACATGCTGTTTTTAATGCGCTGTAGTTCTTGTGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR CCA 90 bp CTGGATATACCTCCTGATGTCATTCAGGAGGGTGAGGGAAGATGGGCTAGGGGTCTCTGGGGTAGCTCTTaGAGCCAACAGAGAATAGAT +
Preference number: 2 (lower is better)
Translates to: LDIPPDVIQEGEGRWARGLWGSS*SQQRID
Trigger: ATCTATTCTCTGTTGGCTCCAAGAGCTACCCCAGAG...ACCCCTAGCCCATCTTCCCTCACCCTCCTGAATGACATCAGGAGGTATATCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR CCA 90 bp AACAAAAGAAACCACTCAAACGGGCTTGGACATGCGATTTTTCCAGCTCCACATGCCCTTCTGACCCCATaGGGGCCTTCCCTATCCCAT +
Preference number: 2 (lower is better)
Translates to: NKRNHSNGLGHAIFPAPHALLTP*GPSLSH
Trigger: ATGGGATAGGGAAGGCCCCCATGGGGTCAGAAGGGC...ATGTGGAGCTGGAAAAATCGCATGTCCAAGCCCGTTTGAGTGGTTTCTTTTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR CCA 90 bp GTCAGAATACAGCCCTGCTTTCTGATACTTCTTCTTTGGGGGACGTGGGGGCTTTGGACTGGAAGAAGGTaGTGCAGAGGCAGTTGCAAT +
Preference number: 2 (lower is better)
Translates to: VRIQPCFLILLLWGTWGLWTGRR*CRGSCN
Trigger: ATTGCAACTGCCTCTGCACCACCTTCTTCCAGTCCA...AAGCCCCCACGTCCCCCAAAGAAGAAGTATCAGAAAGCAGGGCTGTATTCTGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CCA 90 bp GAGCAAACAGATGAAGTAGACACAGCCAGGTTGGGCATAGTGGGGCCGAGGGATGTCTCTGTTCAATTCTaGGTTGACAAACTGAGCAGC +
Preference number: 2 (lower is better)
Translates to: EQTDEVDTARLGIVGPRDVSVQF*VDKLSS
Trigger: GCTGCTCAGTTTGTCAACCCAGAATTGAACAGAGAC...ATCCCTCGGCCCCACTATGCCCAACCTGGCTGTGTCTACTTCATCTGTTTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CCA 90 bp TGGCTAGAACCTCTTCAATCAAGGGTAGAGCATCATCCTCCTGGCCCAAGTCTTGGCTGGGTATCTCATTaGCTGCTTGCTCTTGACTGG +
Preference number: 2 (lower is better)
Translates to: WLEPLQSRVEHHPPGPSLGWVSH*LLALDW
Trigger: CCAGTCAAGAGCAAGCAGCCAATGAGATACCCAGCC...AAGACTTGGGCCAGGAGGATGATGCTCTACCCTTGATTGAAGAGGTTCTAGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR CAA 90 bp CATTCTCCTTTTCAGAGACTGAGGTCTCACTGCTGTCTGCCTCACTaGCTGTCTCTCCCACAATCTCATCAATCTGGGCTGATGCCTCAT +
Preference number: 2 (lower is better)
Translates to: HSPFQRLRSHCCLPH*LSLPQSHQSGLMPH
Trigger: ATGAGGCATCAGCCCAGATTGATGAGATTGTGGGAGAGACAGCAAGTGAGGCAGACAGCAGTGAGACCTCAGTCTCTGAAAAGGAGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR TCA 90 bp TTCCCTAGTCAGGTATCTAGGAAGAAGCCTCAGCTACTGTTTCTGTTTAAGGTCAGCAGGAGGCAGGACTaGTTAGCTCCACTGGATCCC +
Preference number: 2 (lower is better)
Translates to: FPSQVSRKKPQLLFLFKVSRRQD*LAPLDP
Trigger: GGGATCCAGTGGAGCTAATCAGTCCTGCCTCCTGCT...GACCTTAAACAGAAACAGTAGCTGAGGCTTCTTCCTAGATACCTGACTAGGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR TCA 90 bp GCTGTCTGCAGGGCAGAGAACTGGGTCATGAAGACATCAGACTTGATATTCCCACTCGGAGCAAACAGATaGAGTAGACACAGCCAGGTT +
Preference number: 2 (lower is better)
Translates to: AVCRAENWVMKTSDLIFPLGANR*SRHSQV
Trigger: AACCTGGCTGTGTCTACTTCATCTGTTTGCTCCGAG...TGGGAATATCAAGTCTGATGTCTTCATGACCCAGTTCTCTGCCCTGCAGACAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR TCA 90 bp GTGTTTGTGCTCAACCATCCAACCATAGGCCATCTCAGGAGGAACACTGGGGTAAACAGATACAGTAGGTaGTGGGGAAGGGAGATTGCT +
Preference number: 2 (lower is better)
Translates to: VFVLNHPTIGHLRRNTGVNRYSR*WGREIA
Trigger: AGCAATCTCCCTTCCCCATCACCTACTGTATCTGTT...TACCCCAGTGTTCCTCCTGAGATGGCCTATGGTTGGATGGTTGAGCACAAACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR-3UTR TCA 90 bp GTGCATAAAAGGCATTTCAGCCATTGCCTCCCTCATCTTAGGGGGTCTCCCTCTAACAAATGGAGCCACTaGCAGTACAGGTGGCTTCAT +
Preference number: 2 (lower is better)
Translates to: VHKRHFSHCLPHLRGSPSNKWSH*QYRWLH
Trigger: ATGAAGCCACCTGTACTGTCAGTGGCTCCATTTGTT...AGAGGGAGACCCCCTAAGATGAGGGAGGCAATGGCTGAAATGCCTTTTATGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR-3UTR TCA 90 bp CACCATCCCACTATCCAGGTTCAGGCAGTAGTGGTCACTGTGATTATGATACTGTCTGGGTTGACAAACTaGGCAGCCTGGAATGCTTGC +
Preference number: 2 (lower is better)
Translates to: HHPTIQVQAVVVTVIMILSGLTN*AAWNAC
Trigger: GCAAGCATTCCAGGCTGCTCAGTTTGTCAACCCAGA...CAGTATCATAATCACAGTGACCACTACTGCCTGAACCTGGATAGTGGGATGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR TCA 90 bp GCTGTCTGCAGGGCAGAGAACTGGGTCATGAAGACATCAGACTTGATATTCCCAAGTCCATTCACACGCTaGCTCTTGCCTCCGATGATT +
Preference number: 2 (lower is better)
Translates to: AVCRAENWVMKTSDLIFPSPFTR*LLPPMI
Trigger: AATCATCGGAGGCAAGAGTCAGCGTGTGAATGGACT...TGGGAATATCAAGTCTGATGTCTTCATGACCCAGTTCTCTGCCCTGCAGACAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR GCA 90 bp CAGATGTACACATCTTGCTCCTTTACTCCTTTGGGTCTCCCTTTACAATACGTATGGCCCCATTCCCCTTaGCCAGATGGACCCTTCCCA +
Preference number: 2 (lower is better)
Translates to: QMYTSCSFTPLGLPLQYVWPHSP*PDGPFP
Trigger: TGGGAAGGGTCCATCTGGGCAAGGGGAATGGGGCCA...TACGTATTGTAAAGGGAGACCCAAAGGAGTAAAGGAGCAAGATGTGTACATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR GCA 90 bp AAGAGACAGTATAGTCTGTTAACTTCTGGTCAAGAGAGTAGGAAGGAAGGAGACTGGCCCCATTCCCCTTaGCCAGATGGACCCTTCCCA +
Preference number: 2 (lower is better)
Translates to: KRQYSLLTSGQESRKEGDWPHSP*PDGPFP
Trigger: TGGGAAGGGTCCATCTGGGCAAGGGGAATGGGGCCA...GTCTCCTTCCTTCCTACTCTCTTGACCAGAAGTTAACAGACTATACTGTCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR GCA 90 bp GTCAGGTATCTAGGAAGAAGCCTCAGCTACTGTTTCTGTTTAAGGTCTCTGGGGGCAGCTTCTTCGCAATaGCTGTGGGATCTGAGGATG +
Preference number: 2 (lower is better)
Translates to: VRYLGRSLSYCFCLRSLGAASSQ*LWDLRM
Trigger: CATCCTCAGATCCCACAGGCATTGCGAAGAAGCTGC...CCCCAGAGACCTTAAACAGAAACAGTAGCTGAGGCTTCTTCCTAGATACCTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR GCA 90 bp TGGGTCTCCCTTTACAATACGTATAAAGGTCCAACACACAGCAGGTCCCCACTAGCAGCTTCTTCGCAATaGCTGTGGGATCTGAGGATG +
Preference number: 2 (lower is better)
Translates to: WVSLYNTYKGPTHSRSPLAASSQ*LWDLRM
Trigger: CATCCTCAGATCCCACAGGCATTGCGAAGAAGCTGC...TAGTGGGGACCTGCTGTGTGTTGGACCTTTATACGTATTGTAAAGGGAGACCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR GCA 90 bp GCTCCAAGGCTTATTAAGTACCTAATGTCAACAACATGGCCCCATTCCCCTTGCGCAGCTTCTTCGCAATaGCTGTGGGATCTGAGGATG +
Preference number: 2 (lower is better)
Translates to: APRLIKYLMSTTWPHSPCAASSQ*LWDLRM
Trigger: CATCCTCAGATCCCACAGGCATTGCGAAGAAGCTGC...GCAAGGGGAATGGGGCCATGTTGTTGACATTAGGTACTTAATAAGCCTTGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR GCA 90 bp ACGAGTCAGAGCATCGTCACCATAAGGGGAAATGTACAATTAGGACAGCATTGGTTGCAAGAACTACCGTaGCCTTCTGACCCCATGGGG +
Preference number: 2 (lower is better)
Translates to: TSQSIVTIRGNVQLGQHWLQELP*PSDPMG
Trigger: CCCCATGGGGTCAGAAGGGCACGGTAGTTCTTGCAA...CCAATGCTGTCCTAATTGTACATTTCCCCTTATGGTGACGATGCTCTGACTCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR GCA 90 bp AAACGGGCTTGGACATGCGATTTTTCCAGCTCCACATGTGAGTATCTTATACCCTTGCAAGAACTACCGTaGCCTTCTGACCCCATGGGG +
Preference number: 2 (lower is better)
Translates to: KRAWTCDFSSSTCEYLIPLQELP*PSDPMG
Trigger: CCCCATGGGGTCAGAAGGGCACGGTAGTTCTTGCAA...GGGTATAAGATACTCACATGTGGAGCTGGAAAAATCGCATGTCCAAGCCCGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR GCA 90 bp CGTATAAAGGTCCAACACACAGCAGGTCCCCACTACAGCCTCCAAGGGAATGATAAACGGGCTTGGACATaGGATTTTTCCAGCTCCACA +
Preference number: 2 (lower is better)
Translates to: RIKVQHTAGPHYSLQGNDKRAWT*DFSSST
Trigger: TGTGGAGCTGGAAAAATCGCATGTCCAAGCCCGTTT...ATCATTCCCTTGGAGGCTGTAGTGGGGACCTGCTGTGTGTTGGACCTTTATACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR GCA 90 bp ACACACAAGAACTACAGCGCATTAAAAACAGCATGTGTGCTGGCGGGGGCCTGGAGTGATGTAGTGCTTTaGCCCGCATTTCAAACACCA +
Preference number: 2 (lower is better)
Translates to: THKNYSALKTACVLAGAWSDVVL*PAFQTP
Trigger: TGGTGTTTGAAATGCGGGGCAAAGCACTACATCACT...CCAGGCCCCCGCCAGCACACATGCTGTTTTTAATGCGCTGTAGTTCTTGTGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR GCA 90 bp CTGGATATACCTCCTGATGTCATTCAGGAGGGTGAGGGAAGATGGGCTAGGGGTAGTGATGTAGTGCTTTaGCCCGCATTTCAAACACCA +
Preference number: 2 (lower is better)
Translates to: LDIPPDVIQEGEGRWARGSDVVL*PAFQTP
Trigger: TGGTGTTTGAAATGCGGGGCAAAGCACTACATCACT...ACCCCTAGCCCATCTTCCCTCACCCTCCTGAATGACATCAGGAGGTATATCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR GCA 90 bp GTGCATAAAAGGCATTTCAGCCATTGCCTCCCTCATCTTAGGGGGTCTCCCTCTCTGAGTGGGGAGCAGTaGTTCGGCTTTAAGGTTTAT +
Preference number: 2 (lower is better)
Translates to: VHKRHFSHCLPHLRGSPSLSGEQ*FGFKVY
Trigger: ATAAACCTTAAAGCCGAAGCACTGCTCCCCACTCAG...AGAGGGAGACCCCCTAAGATGAGGGAGGCAATGGCTGAAATGCCTTTTATGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR-3UTR GCA 90 bp GAGCAAACAGATGAAGTAGACACAGCCAGGTTGGGCATAGTGGGGCCGAGGGATAATCGTTCTAGACATTaGACCCATTCATGCCTCTGT +
Preference number: 2 (lower is better)
Translates to: EQTDEVDTARLGIVGPRDNRSRH*THSCLC
Trigger: ACAGAGGCATGAATGGGTGCAATGTCTAGAACGATT...ATCCCTCGGCCCCACTATGCCCAACCTGGCTGTGTCTACTTCATCTGTTTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CCA 90 bp TACCTGGGTATAGGAAGCAGCTTCTTCGCAATGCCTGTGGGATCTGAGGATGACAGTACCAGTAGGTTCTaGTCATCAATGTGGTCCTCC +
Preference number: 2 (lower is better)
Translates to: YLGIGSSFFAMPVGSEDDSTSRF*SSMWSS
Trigger: GGAGGACCACATTGATGACCAGAACCTACTGGTACT...GTCATCCTCAGATCCCACAGGCATTGCGAAGAAGCTGCTTCCTATACCCAGGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR CCA 90 bp TGGGTCTCCCTTTACAATACGTATAAAGGTCCAACACACAGCAGGTCCCCACTAAACCCGCCTGGCAGCTaGGGGGTTCTTTTTATTTCG +
Preference number: 2 (lower is better)
Translates to: WVSLYNTYKGPTHSRSPLNPPGS*GVLFIS
Trigger: CGAAATAAAAAGAACCCCCCAGCTGCCAGGCGGGTT...TAGTGGGGACCTGCTGTGTGTTGGACCTTTATACGTATTGTAAAGGGAGACCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CCA 90 bp GCCGATTTAGTGAAGTGTCCTGTGCAGAAAAGAGTCCAGGGCTGTCAGTTAATTTGGGGTAGGTACTCATaGAAAGGAGGGGAGTCCTGC +
Preference number: 2 (lower is better)
Translates to: ADLVKCPVQKRVQGCQLIWGRYS*KGGESC
Trigger: GCAGGACTCCCCTCCTTTCCATGAGTACCTACCCCA...AATTAACTGACAGCCCTGGACTCTTTTCTGCACAGGACACTTCACTAAATCGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR-3UTR CCA 90 bp ACATTTCCGAGGTCGACCTGGCCTACGTTTCACAAAGTTATTCCCTGTCCTGGCCACATTTTCCGAGCTTaGCGTTGCATAGCTTCCACT +
Preference number: 2 (lower is better)
Translates to: TFPRSTWPTFHKVIPCPGHIFRA*RCIAST
Trigger: AGTGGAAGCTATGCAACGCCAAGCTCGGAAAATGTG...GCCAGGACAGGGAATAACTTTGTGAAACGTAGGCCAGGTCGACCTCGGAAATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR CAA 90 bp CTCTGTATCCTCTGGTTACAGCATTGCTCGCCACATGGGCAAGTGTaGGGGGAACACTCAGCAAAGATCATTCTATTGAGGCAGTCATCA +
Preference number: 2 (lower is better)
Translates to: LCILWLQHCSPHGQV*GEHSAKIILLRQSS
Trigger: TGATGACTGCCTCAATAGAATGATCTTTGCTGAGTGTTCCCCCAACACTTGCCCATGTGGCGAGCAATGCTGTAACCAGAGGATACAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR TCA 90 bp GAGCAGGAGGCAGGACTGATTAGCTCCACTGGATCCCAGATGCTTGAGGTTCTCTATCCCTTTGGATTTTaGGTTATACCTGGGTATAGG +
Preference number: 2 (lower is better)
Translates to: EQEAGLISSTGSQMLEVLYPFGF*VIPGYR
Trigger: CCTATACCCAGGTATAACTCAAAATCCAAAGGGATA...GAGAACCTCAAGCATCTGGGATCCAGTGGAGCTAATCAGTCCTGCCTCCTGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR TCA 90 bp GAGCAGGAGGCAGGACTGATTAGCTCCACTGGATCCCAGATGCTTGAGGTTCTCCAGTTACAAGTGCTTTaGGCTGTCAACTCACATTTT +
Preference number: 2 (lower is better)
Translates to: EQEAGLISSTGSQMLEVLQLQVL*AVNSHF
Trigger: AAAATGTGAGTTGACAGCTCAAAGCACTTGTAACTG...GAGAACCTCAAGCATCTGGGATCCAGTGGAGCTAATCAGTCCTGCCTCCTGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR TCA 90 bp CTAATGTCAACAACATGGCCCCATTCCCCTTGCCCAGATGGACCCTTCCCACCCATAGGTGAATACTGCTaGACAGTTTATGTAGTGACT +
Preference number: 2 (lower is better)
Translates to: LMSTTWPHSPCPDGPFPPIGEYC*TVYVVT
Trigger: AGTCACTACATAAACTGTTCAGCAGTATTCACCTAT...GGGTGGGAAGGGTCCATCTGGGCAAGGGGAATGGGGCCATGTTGTTGACATTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR TCA 90 bp GCACAGCAGACACACAAGAACTACAGCGCATTAAAAACAGCATGTGTGCTGGCGTGTATCTATTTGCAGTaGTGTAGTGCTTTGCCCCGC +
Preference number: 2 (lower is better)
Translates to: AQQTHKNYSALKTACVLACIYLQ*CSALPR
Trigger: GCGGGGCAAAGCACTACATCACTGCAAATAGATACA...CGCCAGCACACATGCTGTTTTTAATGCGCTGTAGTTCTTGTGTGTCTGCTGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR TCA 90 bp TGGCTAGAACCTCTTCAATCAAGGGTAGAGCATCATCCTCCTGGCCCAAGTCTTTGTATCTATTTGCAGTaGTGTAGTGCTTTGCCCCGC +
Preference number: 2 (lower is better)
Translates to: WLEPLQSRVEHHPPGPSLCIYLQ*CSALPR
Trigger: GCGGGGCAAAGCACTACATCACTGCAAATAGATACA...AAGACTTGGGCCAGGAGGATGATGCTCTACCCTTGATTGAAGAGGTTCTAGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR TCA 90 bp GGGCATTGTAATAGGCCTTTCGTAGACGACAAACATCTCTCCCAACTGGGGATTTACACACAGTCACCCTaGCGAAGCAGCAAGTCATCT +
Preference number: 2 (lower is better)
Translates to: GHCNRPFVDDKHLSQLGIYTQSP*RSSKSS
Trigger: AGATGACTTGCTGCTTCGTCAGGGTGACTGTGTGTA...AATCCCCAGTTGGGAGAGATGTTTGTCGTCTACGAAAGGCCTATTACAATGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR TCA 90 bp GCAGTAATGGGGGAAGAATCTGTCCTAATGCTGACCCAGCTGCCTGTTGAGCTGATTGTTTTCTCCCTGTaGATGAAGACGGATGACTTC +
Preference number: 2 (lower is better)
Translates to: AVMGEESVLMLTQLPVELIVFSL*MKTDDF
Trigger: GAAGTCATCCGTCTTCATTCACAGGGAGAAAACAAT...CAGCTCAACAGGCAGCTGGGTCAGCATTAGGACAGATTCTTCCCCCATTACTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR-3UTR TCA 90 bp TGCATCACTACTTACAGGGCTCTGACCTCCACTAGTCCCAGAAGACTGAGAGCATGGTTCCTTTCTTGCTaGCATTTATCTGTTGGCCCA +
Preference number: 2 (lower is better)
Translates to: CITTYRALTSTSPRRLRAWFLSC*HLSVGP
Trigger: TGGGCCAACAGATAAATGTCAGCAAGAAAGGAACCA...TGCTCTCAGTCTTCTGGGACTAGTGGAGGTCAGAGCCCTGTAAGTAGTGATGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR-3UTR TCA 90 bp GCCGATTTAGTGAAGTGTCCTGTGCAGAAAAGAGTCCAGGGCTGTCAGTTAATTCAATGGACTAGATTCTaGAGGCTCTCGGTGGACCCA +
Preference number: 2 (lower is better)
Translates to: ADLVKCPVQKRVQGCQLIQWTRF*RLSVDP
Trigger: TGGGTCCACCGAGAGCCTTCAGAATCTAGTCCATTG...AATTAACTGACAGCCCTGGACTCTTTTCTGCACAGGACACTTCACTAAATCGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR-3UTR TCA 90 bp CTGATTCCCCAACCTTTTTCCTCAGCTCGAAATCGTTCTAGACATTGCACCCATTCTGGGTTGACAAACTaGGCAGCCTGGAATGCTTGC +
Preference number: 2 (lower is better)
Translates to: LIPQPFSSARNRSRHCTHSGLTN*AAWNAC
Trigger: GCAAGCATTCCAGGCTGCTCAGTTTGTCAACCCAGA...ATGGGTGCAATGTCTAGAACGATTTCGAGCTGAGGAAAAAGGTTGGGGAATCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR TCA 90 bp GAGCAAACAGATGAAGTAGACACAGCCAGGTTGGGCATAGTGGGGCCGAGGGATAGATACTTTCCAACATaGATGGGCGCTGGAAATAAT +
Preference number: 2 (lower is better)
Translates to: EQTDEVDTARLGIVGPRDRYFPT*MGAGNN
Trigger: ATTATTTCCAGCGCCCATTCATGTTGGAAAGTATCT...ATCCCTCGGCCCCACTATGCCCAACCTGGCTGTGTCTACTTCATCTGTTTGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR TCA 90 bp GCACAGCAGACACACAAGAACTACAGCGCATTAAAAACAGCATGTGTGCTGGCGGACTCTTGCCTCCGATaGTTCCTCGACATTTCTCAA +
Preference number: 2 (lower is better)
Translates to: AQQTHKNYSALKTACVLADSCLR*FLDISQ
Trigger: TTGAGAAATGTCGAGGAATCATCGGAGGCAAGAGTC...CGCCAGCACACATGCTGTTTTTAATGCGCTGTAGTTCTTGTGTGTCTGCTGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR TCA 90 bp CGAATAACATCGTCGTCCTTCTCATGCCCATTCTCCTTTTCAGAGACTGAGGTCAGTCCATTCACACGCTaGCTCTTGCCTCCGATGATT +
Preference number: 2 (lower is better)
Translates to: RITSSSFSCPFSFSETEVSPFTR*LLPPMI
Trigger: AATCATCGGAGGCAAGAGTCAGCGTGTGAATGGACT...GACCTCAGTCTCTGAAAAGGAGAATGGGCATGAGAAGGACGACGATGTTATTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR TCA 90 bp ACACACAAGAACTACAGCGCATTAAAAACAGCATGTGTGCTGGCGGGGGCCTGGGTTGACTGGGGTTCTTaGCTACTTTCCTCTGTTTTT +
Preference number: 2 (lower is better)
Translates to: THKNYSALKTACVLAGAWVDWGS*LLSSVF
Trigger: AAAAACAGAGGAAAGTAGTCAAGAACCCCAGTCAAC...CCAGGCCCCCGCCAGCACACATGCTGTTTTTAATGCGCTGTAGTTCTTGTGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR GCA 90 bp TTCTCCATGGGCTCTTGGTCCTCATTTTGTACCATCCGCTGCAGCAGACTATCCCCACTGGATCCCAGATaGTTGAGGTTCTCATTCTTT +
Preference number: 2 (lower is better)
Translates to: FSMGSWSSFCTIRCSRLSPLDPR*LRFSFF
Trigger: AAAGAATGAGAACCTCAAGCATCTGGGATCCAGTGG...GGATAGTCTGCTGCAGCGGATGGTACAAAATGAGGACCAAGAGCCCATGGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR GCA 90 bp TACCTGGGTATAGGAAGCAGCTTCTTCGCAATGCCTGTGGGATCTGAGGATGACCCACTGGATCCCAGATaGTTGAGGTTCTCATTCTTT +
Preference number: 2 (lower is better)
Translates to: YLGIGSSFFAMPVGSEDDPLDPR*LRFSFF
Trigger: AAAGAATGAGAACCTCAAGCATCTGGGATCCAGTGG...GTCATCCTCAGATCCCACAGGCATTGCGAAGAAGCTGCTTCCTATACCCAGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR GCA 90 bp GACATGCAGACTAACTCTGTATCTATTTGCAGTGATGTAGTGCTTTGCCCCGCAGCAGCTTCTTCGCAATaGCTGTGGGATCTGAGGATG +
Preference number: 2 (lower is better)
Translates to: DMQTNSVSICSDVVLCPAAASSQ*LWDLRM
Trigger: CATCCTCAGATCCCACAGGCATTGCGAAGAAGCTGC...TGCGGGGCAAAGCACTACATCACTGCAAATAGATACAGAGTTAGTCTGCATGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR GCA 90 bp ACGAGTCAGAGCATCGTCACCATAAGGGGAAATGTACAATTAGGACAGCATTGGGCAGCTTCTTCGCAATaGCTGTGGGATCTGAGGATG +
Preference number: 2 (lower is better)
Translates to: TSQSIVTIRGNVQLGQHWAASSQ*LWDLRM
Trigger: CATCCTCAGATCCCACAGGCATTGCGAAGAAGCTGC...CCAATGCTGTCCTAATTGTACATTTCCCCTTATGGTGACGATGCTCTGACTCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR GCA 90 bp CAGTATAGTCTGTTAACTTCTGGTCAAGAGAGTAGGAAGGAAGGAGACACCCTGGCAGCTTCTTCGCAATaGCTGTGGGATCTGAGGATG +
Preference number: 2 (lower is better)
Translates to: QYSLLTSGQESRKEGDTLAASSQ*LWDLRM
Trigger: CATCCTCAGATCCCACAGGCATTGCGAAGAAGCTGC...CAGGGTGTCTCCTTCCTTCCTACTCTCTTGACCAGAAGTTAACAGACTATACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR GCA 90 bp AACAAAAGAAACCACTCAAACGGGCTTGGACATGCGATTTTTCCAGCTCCACATTTGCAAGAACTACCGTaGCCTTCTGACCCCATGGGG +
Preference number: 2 (lower is better)
Translates to: NKRNHSNGLGHAIFPAPHLQELP*PSDPMG
Trigger: CCCCATGGGGTCAGAAGGGCACGGTAGTTCTTGCAA...ATGTGGAGCTGGAAAAATCGCATGTCCAAGCCCGTTTGAGTGGTTTCTTTTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR GCA 90 bp ACACACAAGAACTACAGCGCATTAAAAACAGCATGTGTGCTGGCGGGGGCCTGGTGTAGTGACTTTTGTTaGAGGGGTGGGTTTAGAGTT +
Preference number: 2 (lower is better)
Translates to: THKNYSALKTACVLAGAWCSDFC*RGGFRV
Trigger: AACTCTAAACCCACCCCTGCAACAAAAGTCACTACA...CCAGGCCCCCGCCAGCACACATGCTGTTTTTAATGCGCTGTAGTTCTTGTGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR GCA 90 bp CTGGATATACCTCCTGATGTCATTCAGGAGGGTGAGGGAAGATGGGCTAGGGGTTGTAGTGACTTTTGTTaGAGGGGTGGGTTTAGAGTT +
Preference number: 2 (lower is better)
Translates to: LDIPPDVIQEGEGRWARGCSDFC*RGGFRV
Trigger: AACTCTAAACCCACCCCTGCAACAAAAGTCACTACA...ACCCCTAGCCCATCTTCCCTCACCCTCCTGAATGACATCAGGAGGTATATCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR GCA 90 bp GGGGAAGGAGTAGCTTCTTTTAGAGATGTGAGTTCACTCAAGTGCGAAGGAGAAACTGGTGACCTCATTTaGCTCTTAGGCCTGCCTCTC +
Preference number: 2 (lower is better)
Translates to: GEGVASFRDVSSLKCEGETGDLI*LLGLPL
Trigger: GAGAGGCAGGCCTAAGAGGCAAATGAGGTCACCAGT...TTCTCCTTCGCACTTGAGTGAACTCACATCTCTAAAAGAAGCTACTCCTTCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR-3UTR GCA 90 bp GATAAAGAGTGGGAGGATACCTTCCATAGTAACCTAATCCTATGGGAGCAGCTGAGGCATTTCAGCCATTaGCTCCCTCATCTTAGGGGG +
Preference number: 2 (lower is better)
Translates to: DKEWEDTFHSNLILWEQLRHFSH*LPHLRG
Trigger: CCCCCTAAGATGAGGGAGGCAATGGCTGAAATGCCT...CAGCTGCTCCCATAGGATTAGGTTACTATGGAAGGTATCCTCCCACTCTTTATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR-3UTR GCA 90 bp TGGCTAGAACCTCTTCAATCAAGGGTAGAGCATCATCCTCCTGGCCCAAGTCTTTTCCGAGCTTGGCGTTaGATAGCTTCCACTACACTT +
Preference number: 2 (lower is better)
Translates to: WLEPLQSRVEHHPPGPSLFRAWR*IASTTL
Trigger: AAGTGTAGTGGAAGCTATGCAACGCCAAGCTCGGAA...AAGACTTGGGCCAGGAGGATGATGCTCTACCCTTGATTGAAGAGGTTCTAGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR GCA 90 bp TCAAGGGTAGAGCATCATCCTCCTGGCCCAAGTCTTTTAGGGGTGGCTTTGAGCAATCGTTCTAGACATTaGACCCATTCATGCCTCTGT +
Preference number: 2 (lower is better)
Translates to: SRVEHHPPGPSLLGVALSNRSRH*THSCLC
Trigger: ACAGAGGCATGAATGGGTGCAATGTCTAGAACGATT...GCTCAAAGCCACCCCTAAAAGACTTGGGCCAGGAGGATGATGCTCTACCCTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CCA 90 bp AGCTGTCTGCAGGGCAGAGAACTGGGTCATGAAGACATCAGACTTGATATTCCCTTCTGGTCATCAATGTaGTCCTCCCTCCTCTCTACA +
Preference number: 2 (lower is better)
Translates to: SCLQGRELGHEDIRLDIPFWSSM*SSLLST
Trigger: TGTAGAGAGGAGGGAGGACCACATTGATGACCAGAA...GGGAATATCAAGTCTGATGTCTTCATGACCCAGTTCTCTGCCCTGCAGACAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CCA 90 bp GCACAGCAGACACACAAGAACTACAGCGCATTAAAAACAGCATGTGTGCTGGCGTCTTCGCAATGCCTGTaGGATCTGAGGATGACAGAA +
Preference number: 2 (lower is better)
Translates to: AQQTHKNYSALKTACVLASSQCL*DLRMTE
Trigger: TTCTGTCATCCTCAGATCCCACAGGCATTGCGAAGA...CGCCAGCACACATGCTGTTTTTAATGCGCTGTAGTTCTTGTGTGTCTGCTGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR CCA 90 bp GCACAGCAGACACACAAGAACTACAGCGCATTAAAAACAGCATGTGTGCTGGCGCTCTGGGGTAGCTCTTaGAGCCAACAGAGAATAGAT +
Preference number: 2 (lower is better)
Translates to: AQQTHKNYSALKTACVLALWGSS*SQQRID
Trigger: ATCTATTCTCTGTTGGCTCCAAGAGCTACCCCAGAG...CGCCAGCACACATGCTGTTTTTAATGCGCTGTAGTTCTTGTGTGTCTGCTGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR CCA 90 bp GCTCCAAGGCTTATTAAGTACCTAATGTCAACAACATGGCCCCATTCCCCTTGCCCCATGATTCCATTTTaGGGAGTAGAGGTAGGGAGG +
Preference number: 2 (lower is better)
Translates to: APRLIKYLMSTTWPHSPCPMIPF*GVEVGR
Trigger: CCTCCCTACCTCTACTCCCCAAAATGGAATCATGGG...GCAAGGGGAATGGGGCCATGTTGTTGACATTAGGTACTTAATAAGCCTTGGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR CCA 90 bp ACGAGTCAGAGCATCGTCACCATAAGGGGAAATGTACAATTAGGACAGCATTGGGAGGGTGAGGGAAGATaGGCTAGGGGTGAAGAGAAA +
Preference number: 2 (lower is better)
Translates to: TSQSIVTIRGNVQLGQHWEGEGR*ARGEEK
Trigger: TTTCTCTTCACCCCTAGCCCATCTTCCCTCACCCTC...CCAATGCTGTCCTAATTGTACATTTCCCCTTATGGTGACGATGCTCTGACTCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR CCA 90 bp CAGTATAGTCTGTTAACTTCTGGTCAAGAGAGTAGGAAGGAAGGAGACACCCTGGAGGGTGAGGGAAGATaGGCTAGGGGTGAAGAGAAA +
Preference number: 2 (lower is better)
Translates to: QYSLLTSGQESRKEGDTLEGEGR*ARGEEK
Trigger: TTTCTCTTCACCCCTAGCCCATCTTCCCTCACCCTC...CAGGGTGTCTCCTTCCTTCCTACTCTCTTGACCAGAAGTTAACAGACTATACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR CCA 90 bp GCTCCAAGGCTTATTAAGTACCTAATGTCAACAACATGGCCCCATTCCCCTTGCCCACTCAAACGGGCTTaGACATGCGATTTTTCCAGC +
Preference number: 2 (lower is better)
Translates to: APRLIKYLMSTTWPHSPCPLKRA*TCDFSS
Trigger: GCTGGAAAAATCGCATGTCCAAGCCCGTTTGAGTGG...GCAAGGGGAATGGGGCCATGTTGTTGACATTAGGTACTTAATAAGCCTTGGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR CCA 90 bp TCAAGGGTAGAGCATCATCCTCCTGGCCCAAGTCTTTTAGGGGTGGCTTTGAGCAGTTATTCCCTGTCCTaGCCTGCCTTTGAAGTTTTT +
Preference number: 2 (lower is better)
Translates to: SRVEHHPPGPSLLGVALSSYSLS*PAFEVF
Trigger: AAAAACTTCAAAGGCAGGCCAGGACAGGGAATAACT...GCTCAAAGCCACCCCTAAAAGACTTGGGCCAGGAGGATGATGCTCTACCCTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CCA 90 bp GCCTCTGTATCCTCTGGTTACAGCATTGCTCGCCACATGGGCAAGTGTTGGGGGGATCAATCGACTCTTTaGGTCTGTAGTTTTGTAAAC +
Preference number: 2 (lower is better)
Translates to: ASVSSGYSIARHMGKCWGDQSTL*VCSFVN
Trigger: GTTTACAAAACTACAGACCCAAAGAGTCGATTGATC...CCCCCAACACTTGCCCATGTGGCGAGCAATGCTGTAACCAGAGGATACAGAGGC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CCA 90 bp CGAATAACATCGTCGTCCTTCTCATGCCCATTCTCCTTTTCAGAGACTGAGGTCTTTTGTGTGTGGCCATaGGCTGGCTGTTTTTGCTGC +
Preference number: 2 (lower is better)
Translates to: RITSSSFSCPFSFSETEVFCVWP*AGCFCC
Trigger: GCAGCAAAAACAGCCAGCCCATGGCCACACACAAAA...GACCTCAGTCTCTGAAAAGGAGAATGGGCATGAGAAGGACGACGATGTTATTCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CCA 90 bp GGTGCGCCGACTATCCCTCATCAGATACACACAGTCACCCTGACGAAGCAGCAAAGTTCCTTTCACGATTaGACATTGGCTTCATCTGTA +
Preference number: 2 (lower is better)
Translates to: GAPTIPHQIHTVTLTKQQSSFHD*TLASSV
Trigger: TACAGATGAAGCCAATGTCCAATCGTGAAAGGAACT...TTGCTGCTTCGTCAGGGTGACTGTGTGTATCTGATGAGGGATAGTCGGCGCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR CAA 90 bp AAGGCTCTCGGTGGACCCACTGTTCCTCTCTGTTTATTAAGCTTTTaGAAGGAGAGAGATGAGGGCAGGACATGTGACAACGGTGCTTTT +
Preference number: 2 (lower is better)
Translates to: KALGGPTVPLCLLSF*KERDEGRTCDNGAF
Trigger: AAAAGCACCGTTGTCACATGTCCTGCCCTCATCTCTCTCCTTCAAAAAGCTTAATAAACAGAGAGGAACAGTGGGTCCACCGAGAGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR CAA 90 bp AATCACAGCATCAATACTTTTCTCCATGGGCTCTTGGTCCTCATTTaGTACCATCCGCTGCAGCAGACTATCCACAGAGTCATCCCCAGA +
Preference number: 2 (lower is better)
Translates to: NHSINTFLHGLLVLI*YHPLQQTIHRVIPR
Trigger: TCTGGGGATGACTCTGTGGATAGTCTGCTGCAGCGGATGGTACAAAATGAGGACCAAGAGCCCATGGAGAAAAGTATTGATGCTGTGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676814.1
ENST00000677042.1
3UTR CAA 90 bp AGAGGCAGTTGCAATCACAGCATCAATACTTTTCTCCATGGGCTCTaGGTCCTCATTTTGTACCATCCGCTGCAGCAGACTATCCACAGA +
Preference number: 2 (lower is better)
Translates to: RGSCNHSINTFLHGL*VLILYHPLQQTIHR
Trigger: TCTGTGGATAGTCTGCTGCAGCGGATGGTACAAAATGAGGACCAAGAGCCCATGGAGAAAAGTATTGATGCTGTGATTGCAACTGCCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR CAA 90 bp GCTGCAGCAGACTATCCACAGAGTCATCCCCAGAAGCAACTAATCTaGGACTTCGAGAGGGAACTCCGTTTACTGTTGAAGAAGTACTCT +
Preference number: 2 (lower is better)
Translates to: AAADYPQSHPQKQLI*DFERELRLLLKKYS
Trigger: AGAGTACTTCTTCAACAGTAAACGGAGTTCCCTCTCGAAGTCCAAGATTAGTTGCTTCTGGGGATGACTCTGTGGATAGTCTGCTGCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676814.1
3UTR-3UTR TCA 90 bp CTGGATATACCTCCTGATGTCATTCAGGAGGGTGAGGGAAGATGGGCTAGGGGTTATCCCTTTGGATTTTaGGTTATACCTGGGTATAGG +
Preference number: 2 (lower is better)
Translates to: LDIPPDVIQEGEGRWARGYPFGF*VIPGYR
Trigger: CCTATACCCAGGTATAACTCAAAATCCAAAGGGATA...ACCCCTAGCCCATCTTCCCTCACCCTCCTGAATGACATCAGGAGGTATATCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR TCA 90 bp GAGCAGGAGGCAGGACTGATTAGCTCCACTGGATCCCAGATGCTTGAGGTTCTCATAGGTGAATACTGCTaGACAGTTTATGTAGTGACT +
Preference number: 2 (lower is better)
Translates to: EQEAGLISSTGSQMLEVLIGEYC*TVYVVT
Trigger: AGTCACTACATAAACTGTTCAGCAGTATTCACCTAT...GAGAACCTCAAGCATCTGGGATCCAGTGGAGCTAATCAGTCCTGCCTCCTGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR TCA 90 bp GCTCCAAGGCTTATTAAGTACCTAATGTCAACAACATGGCCCCATTCCCCTTGCTGTATCTATTTGCAGTaGTGTAGTGCTTTGCCCCGC +
Preference number: 2 (lower is better)
Translates to: APRLIKYLMSTTWPHSPCCIYLQ*CSALPR
Trigger: GCGGGGCAAAGCACTACATCACTGCAAATAGATACA...GCAAGGGGAATGGGGCCATGTTGTTGACATTAGGTACTTAATAAGCCTTGGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR TCA 90 bp GCTTCTTTTAGAGATGTGAGTTCACTCAAGTGCGAAGGAGAATTTGGCAACAAACCGCCTCCTCCCCTTTaGGGCCTTCTTCATTGCAAG +
Preference number: 2 (lower is better)
Translates to: ASFRDVSSLKCEGEFGNKPPPPL*GLLHCK
Trigger: CTTGCAATGAAGAAGGCCTCAAAGGGGAGGAGGCGG...TTTGTTGCCAAATTCTCCTTCGCACTTGAGTGAACTCACATCTCTAAAAGAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR-3UTR TCA 90 bp TCTGTGTTTGTGACGGTGCCTGTGTTTGTGCTCAACCATCCAACCATAGGCCATATGGTCTCATCACTATaGGACTCACTGATTGGGGAA +
Preference number: 2 (lower is better)
Translates to: SVFVTVPVFVLNHPTIGHMVSSL*DSLIGE
Trigger: TTCCCCAATCAGTGAGTCTCATAGTGATGAGACCAT...ATGGCCTATGGTTGGATGGTTGAGCACAAACACAGGCACCGTCACAAACACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR-3UTR TCA 90 bp GACATGCAGACTAACTCTGTATCTATTTGCAGTGATGTAGTGCTTTGCCCCGCATGCAAGAGTCACTTGTaGCTGCAGGCACTAAAAGGC +
Preference number: 2 (lower is better)
Translates to: DMQTNSVSICSDVVLCPACKSHL*LQALKG
Trigger: GCCTTTTAGTGCCTGCAGTCACAAGTGACTCTTGCA...TGCGGGGCAAAGCACTACATCACTGCAAATAGATACAGAGTTAGTCTGCATGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR TCA 90 bp AGCACAGCAGACACACAAGAACTACAGCGCATTAAAAACAGCATGTGTGCTGGCTGTTCAATTCTGGGTTaGCAAACTGAGCAGCCTGGA +
Preference number: 2 (lower is better)
Translates to: STADTQELQRIKNSMCAGCSILG*QTEQPG
Trigger: TCCAGGCTGCTCAGTTTGTCAACCCAGAATTGAACA...GCCAGCACACATGCTGTTTTTAATGCGCTGTAGTTCTTGTGTGTCTGCTGTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR TCA 90 bp TTTTCACTGGGTTCCTCAGAGAGATGGCCTCTCCTTTTCTTCAGCTTGTGCTTATCTTTTCCCTTGGGATaGGAGAAAGCACAGGCTGCA +
Preference number: 2 (lower is better)
Translates to: FSLGSSERWPLLFFSLCLSFPLG*EKAQAA
Trigger: TGCAGCCTGTGCTTTCTCTCATCCCAAGGGAAAAGA...TAAGCACAAGCTGAAGAAAAGGAGAGGCCATCTCTCTGAGGAACCCAGTGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR TCA 90 bp GCTCCAAGGCTTATTAAGTACCTAATGTCAACAACATGGCCCCATTCCCCTTGCTACAGCCCTGCTTTCTaGTACTTCTTCTTTGGGGGA +
Preference number: 2 (lower is better)
Translates to: APRLIKYLMSTTWPHSPCYSPAF*YFFFGG
Trigger: TCCCCCAAAGAAGAAGTATCAGAAAGCAGGGCTGTA...GCAAGGGGAATGGGGCCATGTTGTTGACATTAGGTACTTAATAAGCCTTGGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR TCA 90 bp GACATGCAGACTAACTCTGTATCTATTTGCAGTGATGTAGTGCTTTGCCCCGCATGTTTTTGCTGCTGGTaGGTCCATTCACACGCTGAC +
Preference number: 2 (lower is better)
Translates to: DMQTNSVSICSDVVLCPACFCCW*VHSHAD
Trigger: GTCAGCGTGTGAATGGACTCACCAGCAGCAAAAACA...TGCGGGGCAAAGCACTACATCACTGCAAATAGATACAGAGTTAGTCTGCATGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR TCA 90 bp CCCAGATGCTTGAGGTTCTCATTCTTTGAGGGTCACTTTCGAAAGCTGTTTTCTCTCCTTTTCAGAGACTaGGGTCTCACTGCTGTCTGC +
Preference number: 2 (lower is better)
Translates to: PRCLRFSFFEGHFRKLFSLLFRD*GLTAVC
Trigger: GCAGACAGCAGTGAGACCTCAGTCTCTGAAAAGGAG...AGAAAACAGCTTTCGAAAGTGACCCTCAAAGAATGAGAACCTCAAGCATCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR GCA 90 bp GTCAGGTATCTAGGAAGAAGCCTCAGCTACTGTTTCTGTTTAAGGTCTCTGGGGGTGGGGTGGGGCAAATaGTATAAAGTACCAGTAGGT +
Preference number: 2 (lower is better)
Translates to: VRYLGRSLSYCFCLRSLGVGWGK*YKVPVG
Trigger: ACCTACTGGTACTTTATAGCATTTGCCCCACCCCAC...CCCCAGAGACCTTAAACAGAAACAGTAGCTGAGGCTTCTTCCTAGATACCTGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR GCA 90 bp GGGCATTGTAATAGGCCTTTCGTAGACGACAAACATCTCTCCCAACTGGGGATTGTGGGGTGGGGCAAATaGTATAAAGTACCAGTAGGT +
Preference number: 2 (lower is better)
Translates to: GHCNRPFVDDKHLSQLGIVGWGK*YKVPVG
Trigger: ACCTACTGGTACTTTATAGCATTTGCCCCACCCCAC...AATCCCCAGTTGGGAGAGATGTTTGTCGTCTACGAAAGGCCTATTACAATGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR GCA 90 bp GCTCCAAGGCTTATTAAGTACCTAATGTCAACAACATGGCCCCATTCCCCTTGCGTGGGGTGGGGCAAATaGTATAAAGTACCAGTAGGT +
Preference number: 2 (lower is better)
Translates to: APRLIKYLMSTTWPHSPCVGWGK*YKVPVG
Trigger: ACCTACTGGTACTTTATAGCATTTGCCCCACCCCAC...GCAAGGGGAATGGGGCCATGTTGTTGACATTAGGTACTTAATAAGCCTTGGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR GCA 90 bp TGGGGTAGGAATAGGGATCCTGGCCCTATCCCTTTGGATTTTGAGTTATACCTGGTGGGGTGGGGCAAATaGTATAAAGTACCAGTAGGT +
Preference number: 2 (lower is better)
Translates to: WGRNRDPGPIPLDFELYLVGWGK*YKVPVG
Trigger: ACCTACTGGTACTTTATAGCATTTGCCCCACCCCAC...CAGGTATAACTCAAAATCCAAAGGGATAGGGCCAGGATCCCTATTCCTACCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR GCA 90 bp AGACAAACTTCCCTAGTCAGGTATCTAGGAAGAAGCCTCAGCTACTGTTTCTGTGCAGCTTCTTCGCAATaGCTGTGGGATCTGAGGATG +
Preference number: 2 (lower is better)
Translates to: RQTSLVRYLGRSLSYCFCAASSQ*LWDLRM
Trigger: CATCCTCAGATCCCACAGGCATTGCGAAGAAGCTGC...ACAGAAACAGTAGCTGAGGCTTCTTCCTAGATACCTGACTAGGGAAGTTTGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR GCA 90 bp CTCGGCAGATCCCATTCCAACGGGTATATAATGATGCTGAGTGAATATTATCACTTGCAAGAACTACCGTaGCCTTCTGACCCCATGGGG +
Preference number: 2 (lower is better)
Translates to: LGRSHSNGYIMMLSEYYHLQELP*PSDPMG
Trigger: CCCCATGGGGTCAGAAGGGCACGGTAGTTCTTGCAA...GTGATAATATTCACTCAGCATCATTATATACCCGTTGGAATGGGATCTGCCGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR GCA 90 bp GCACAGCAGACACACAAGAACTACAGCGCATTAAAAACAGCATGTGTGCTGGCGAGTGATGTAGTGCTTTaGCCCGCATTTCAAACACCA +
Preference number: 2 (lower is better)
Translates to: AQQTHKNYSALKTACVLASDVVL*PAFQTP
Trigger: TGGTGTTTGAAATGCGGGGCAAAGCACTACATCACT...CGCCAGCACACATGCTGTTTTTAATGCGCTGTAGTTCTTGTGTGTCTGCTGTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR GCA 90 bp GTGTTTGTGCTCAACCATCCAACCATAGGCCATCTCAGGAGGAACACTGGGGTAGGTAGCAATCAGCTGTaGCAACTTTTCTGTTACACT +
Preference number: 2 (lower is better)
Translates to: VFVLNHPTIGHLRRNTGVGSNQL*QLFCYT
Trigger: AGTGTAACAGAAAAGTTGGCACAGCTGATTGCTACC...TACCCCAGTGTTCCTCCTGAGATGGCCTATGGTTGGATGGTTGAGCACAAACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR-3UTR GCA 90 bp GATAAAGAGTGGGAGGATACCTTCCATAGTAACCTAATCCTATGGGAGCAGCTGCCAGTCCAACCACAGTaGCAAGTCCTAACTTCTTGC +
Preference number: 2 (lower is better)
Translates to: DKEWEDTFHSNLILWEQLPVQPQ*QVLTSC
Trigger: GCAAGAAGTTAGGACTTGGCACTGTGGTTGGACTGG...CAGCTGCTCCCATAGGATTAGGTTACTATGGAAGGTATCCTCCCACTCTTTATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR-3UTR GCA 90 bp TCTGTGTTTGTGACGGTGCCTGTGTTTGTGCTCAACCATCCAACCATAGGCCATGGGTTCAACAAAACCTaGATCACTACTTACAGGGCT +
Preference number: 2 (lower is better)
Translates to: SVFVTVPVFVLNHPTIGHGFNKT*ITTYRA
Trigger: AGCCCTGTAAGTAGTGATGCAGGTTTTGTTGAACCC...ATGGCCTATGGTTGGATGGTTGAGCACAAACACAGGCACCGTCACAAACACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR-3UTR GCA 90 bp TCTGTGTTTGTGACGGTGCCTGTGTTTGTGCTCAACCATCCAACCATAGGCCATGTGAGTTCACTCAAGTaGGAAGGAGAATTTGGCAAC +
Preference number: 2 (lower is better)
Translates to: SVFVTVPVFVLNHPTIGHVSSLK*EGEFGN
Trigger: GTTGCCAAATTCTCCTTCGCACTTGAGTGAACTCAC...ATGGCCTATGGTTGGATGGTTGAGCACAAACACAGGCACCGTCACAAACACAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR-3UTR GCA 90 bp GGGCATTGTAATAGGCCTTTCGTAGACGACAAACATCTCTCCCAACTGGGGATTTTTTGTACCATCCGCTaGAGCAGACTATCCACAGAG +
Preference number: 2 (lower is better)
Translates to: GHCNRPFVDDKHLSQLGIFCTIR*SRLSTE
Trigger: CTCTGTGGATAGTCTGCTGCAGCGGATGGTACAAAA...AATCCCCAGTTGGGAGAGATGTTTGTCGTCTACGAAAGGCCTATTACAATGCCC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CCA 90 bp GCTCCAAGGCTTATTAAGTACCTAATGTCAACAACATGGCCCCATTCCCCTTGCTTCTGGTCATCAATGTaGTCCTCCCTCCTCTCTACA +
Preference number: 2 (lower is better)
Translates to: APRLIKYLMSTTWPHSPCFWSSM*SSLLST
Trigger: TGTAGAGAGGAGGGAGGACCACATTGATGACCAGAA...GCAAGGGGAATGGGGCCATGTTGTTGACATTAGGTACTTAATAAGCCTTGGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR CCA 90 bp GCTCCAAGGCTTATTAAGTACCTAATGTCAACAACATGGCCCCATTCCCCTTGCAGTACCAGTAGGTTCTaGTCATCAATGTGGTCCTCC +
Preference number: 2 (lower is better)
Translates to: APRLIKYLMSTTWPHSPCSTSRF*SSMWSS
Trigger: GGAGGACCACATTGATGACCAGAACCTACTGGTACT...GCAAGGGGAATGGGGCCATGTTGTTGACATTAGGTACTTAATAAGCCTTGGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR CCA 90 bp TGGGGTAGGAATAGGGATCCTGGCCCTATCCCTTTGGATTTTGAGTTATACCTGAGTACCAGTAGGTTCTaGTCATCAATGTGGTCCTCC +
Preference number: 2 (lower is better)
Translates to: WGRNRDPGPIPLDFELYLSTSRF*SSMWSS
Trigger: GGAGGACCACATTGATGACCAGAACCTACTGGTACT...CAGGTATAACTCAAAATCCAAAGGGATAGGGCCAGGATCCCTATTCCTACCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR CCA 90 bp ACGAGTCAGAGCATCGTCACCATAAGGGGAAATGTACAATTAGGACAGCATTGGCCCATGATTCCATTTTaGGGAGTAGAGGTAGGGAGG +
Preference number: 2 (lower is better)
Translates to: TSQSIVTIRGNVQLGQHWPMIPF*GVEVGR
Trigger: CCTCCCTACCTCTACTCCCCAAAATGGAATCATGGG...CCAATGCTGTCCTAATTGTACATTTCCCCTTATGGTGACGATGCTCTGACTCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR CCA 90 bp TATATTAGCAGCATTTATATTTTCCGCAATCACACAGCCTACAGACATGCAGACGCCCTTCTGACCCCATaGGGGCCTTCCCTATCCCAT +
Preference number: 2 (lower is better)
Translates to: YISSIYIFRNHTAYRHADALLTP*GPSLSH
Trigger: ATGGGATAGGGAAGGCCCCCATGGGGTCAGAAGGGC...GTCTGCATGTCTGTAGGCTGTGTGATTGCGGAAAATATAAATGCTGCTAATATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR CCA 90 bp GCTCCAAGGCTTATTAAGTACCTAATGTCAACAACATGGCCCCATTCCCCTTGCAGGAAGGAGACACCCTaGATATACCTCCTGATGTCA +
Preference number: 2 (lower is better)
Translates to: APRLIKYLMSTTWPHSPCRKETP*IYLLMS
Trigger: TGACATCAGGAGGTATATCCAGGGTGTCTCCTTCCT...GCAAGGGGAATGGGGCCATGTTGTTGACATTAGGTACTTAATAAGCCTTGGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR CCA 90 bp AAACGGGCTTGGACATGCGATTTTTCCAGCTCCACATGTGAGTATCTTATACCCCCACTCAAACGGGCTTaGACATGCGATTTTTCCAGC +
Preference number: 2 (lower is better)
Translates to: KRAWTCDFSSSTCEYLIPPLKRA*TCDFSS
Trigger: GCTGGAAAAATCGCATGTCCAAGCCCGTTTGAGTGG...GGGTATAAGATACTCACATGTGGAGCTGGAAAAATCGCATGTCCAAGCCCGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR CCA 90 bp TCTGTGTTTGTGACGGTGCCTGTGTTTGTGCTCAACCATCCAACCATAGGCCATCAGACTGGCATTCAATaGCTGCAACATCATCTGCTT +
Preference number: 2 (lower is better)
Translates to: SVFVTVPVFVLNHPTIGHQTGIQ*LQHHLL
Trigger: AAGCAGATGATGTTGCAGCCATTGAATGCCAGTCTG...ATGGCCTATGGTTGGATGGTTGAGCACAAACACAGGCACCGTCACAAACACAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR-3UTR CCA 90 bp GATCAAAAGCATAGGGTTTGGTGCAGACAGGATAGCGGTTCCGGTGGATCTTGTTTCTCCATGGGCTCTTaGTCCTCATTTTGTACCATC +
Preference number: 2 (lower is better)
Translates to: DQKHRVWCRQDSGSGGSCFSMGS*SSFCTI
Trigger: GATGGTACAAAATGAGGACCAAGAGCCCATGGAGAA...ACAAGATCCACCGGAACCGCTATCCTGTCTGCACCAAACCCTATGCTTTTGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CCA 90 bp TCCACATGTGAGTATCTTATACCCAGGTCTCTTAGTAATGTACAGTGCTTCTCTGTTCGGTCCTTGCTGTaGCTACGGCCTGGACTGGAA +
Preference number: 2 (lower is better)
Translates to: STCEYLIPRSLSNVQCFSVRSLL*LRPGLE
Trigger: TTCCAGTCCAGGCCGTAGCCACAGCAAGGACCGAAC...AGAGAAGCACTGTACATTACTAAGAGACCTGGGTATAAGATACTCACATGTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CCA 90 bp CGAATAACATCGTCGTCCTTCTCATGCCCATTCTCCTTTTCAGAGACTGAGGTCGGGTTTCAGAAGGACTaGGAATCTCAACTGGTGCTT +
Preference number: 2 (lower is better)
Translates to: RITSSSFSCPFSFSETEVGFQKD*ESQLVL
Trigger: AAGCACCAGTTGAGATTCCCAGTCCTTCTGAAACCC...GACCTCAGTCTCTGAAAAGGAGAATGGGCATGAGAAGGACGACGATGTTATTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CCA 90 bp GCTCCAAGGCTTATTAAGTACCTAATGTCAACAACATGGCCCCATTCCCCTTGCGGGTTTCAGAAGGACTaGGAATCTCAACTGGTGCTT +
Preference number: 2 (lower is better)
Translates to: APRLIKYLMSTTWPHSPCGFQKD*ESQLVL
Trigger: AAGCACCAGTTGAGATTCCCAGTCCTTCTGAAACCC...GCAAGGGGAATGGGGCCATGTTGTTGACATTAGGTACTTAATAAGCCTTGGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CCA 90 bp AAACGGGCTTGGACATGCGATTTTTCCAGCTCCACATGTGAGTATCTTATACCCCAACACAGCCCTTCCTaGTGTCATCATCTGGCTTCT +
Preference number: 2 (lower is better)
Translates to: KRAWTCDFSSSTCEYLIPQHSPS*CHHLAS
Trigger: AGAAGCCAGATGATGACACCAGGAAGGGCTGTGTTG...GGGTATAAGATACTCACATGTGGAGCTGGAAAAATCGCATGTCCAAGCCCGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CCA 90 bp ACGAGTCAGAGCATCGTCACCATAAGGGGAAATGTACAATTAGGACAGCATTGGCACATGGGCAAGTGTTaGGGGAACACTCAGCAAAGA +
Preference number: 2 (lower is better)
Translates to: TSQSIVTIRGNVQLGQHWHMGKC*GNTQQR
Trigger: TCTTTGCTGAGTGTTCCCCCAACACTTGCCCATGTG...CCAATGCTGTCCTAATTGTACATTTCCCCTTATGGTGACGATGCTCTGACTCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CCA 90 bp TGGCTAGAACCTCTTCAATCAAGGGTAGAGCATCATCCTCCTGGCCCAAGTCTTCTGCTTGCTCTTGACTaGCTAGAACCTCTTCAATCA +
Preference number: 2 (lower is better)
Translates to: WLEPLQSRVEHHPPGPSLLLALD*LEPLQS
Trigger: TGATTGAAGAGGTTCTAGCCAGTCAAGAGCAAGCAG...AAGACTTGGGCCAGGAGGATGATGCTCTACCCTTGATTGAAGAGGTTCTAGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR CAA 90 bp ACAGAGAATAGATGGGGTAGGAATAGGGATCCTGGCCCTATCCCTTaGGATTTTGAGTTATACCTGGGTATAGGAAGCAGCTTCTTCGCA +
Preference number: 2 (lower is better)
Translates to: TENRWGRNRDPGPIP*DFELYLGIGSSFFA
Trigger: TGCGAAGAAGCTGCTTCCTATACCCAGGTATAACTCAAAATCCAAAGGGATAGGGCCAGGATCCCTATTCCTACCCCATCTATTCTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR CAA 90 bp GCTGTAGTGCCAGTTCCTAACTTCTTCGGTTTTGTCTTGGAAGACTaGGAAGGAGGACAGGTAGCAATCAGCTGTGCCAACTTTTCTGTT +
Preference number: 2 (lower is better)
Translates to: AVVPVPNFFGFVLED*EGGQVAISCANFSV
Trigger: AACAGAAAAGTTGGCACAGCTGATTGCTACCTGTCCTCCTTCCAAGTCTTCCAAGACAAAACCGAAGAAGTTAGGAACTGGCACTACAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR-3UTR TCA 90 bp CTGGATATACCTCCTGATGTCATTCAGGAGGGTGAGGGAAGATGGGCTAGGGGTATAGGTGAATACTGCTaGACAGTTTATGTAGTGACT +
Preference number: 2 (lower is better)
Translates to: LDIPPDVIQEGEGRWARGIGEYC*TVYVVT
Trigger: AGTCACTACATAAACTGTTCAGCAGTATTCACCTAT...ACCCCTAGCCCATCTTCCCTCACCCTCCTGAATGACATCAGGAGGTATATCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR TCA 90 bp ATATTTTCACTGGGTTCCTCAGAGAGATGGCCTCTCCTTTTCTTCAGCTTGTGCTTCCAGCTCCACATGTaGGTATCTTATACCCAGGTC +
Preference number: 2 (lower is better)
Translates to: IFSLGSSERWPLLFFSLCFQLHM*VSYTQV
Trigger: GACCTGGGTATAAGATACTCACATGTGGAGCTGGAA...GCACAAGCTGAAGAAAAGGAGAGGCCATCTCTCTGAGGAACCCAGTGAAAATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR TCA 90 bp AAACGGGCTTGGACATGCGATTTTTCCAGCTCCACATGTGAGTATCTTATACCCTGTATCTATTTGCAGTaGTGTAGTGCTTTGCCCCGC +
Preference number: 2 (lower is better)
Translates to: KRAWTCDFSSSTCEYLIPCIYLQ*CSALPR
Trigger: GCGGGGCAAAGCACTACATCACTGCAAATAGATACA...GGGTATAAGATACTCACATGTGGAGCTGGAAAAATCGCATGTCCAAGCCCGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR TCA 90 bp GATAAAGAGTGGGAGGATACCTTCCATAGTAACCTAATCCTATGGGAGCAGCTGCAGACACTTGGCCTATaGCTGTCATCTAGGTCATCT +
Preference number: 2 (lower is better)
Translates to: DKEWEDTFHSNLILWEQLQTLGL*LSSRSS
Trigger: AGATGACCTAGATGACAGTCATAGGCCAAGTGTCTG...CAGCTGCTCCCATAGGATTAGGTTACTATGGAAGGTATCCTCCCACTCTTTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR-3UTR TCA 90 bp TCTGTGTTTGTGACGGTGCCTGTGTTTGTGCTCAACCATCCAACCATAGGCCATATGCAAATATGGCACTaGACTGGGTTCAACAAAACC +
Preference number: 2 (lower is better)
Translates to: SVFVTVPVFVLNHPTIGHMQIWH*TGFNKT
Trigger: GGTTTTGTTGAACCCAGTTCAGTGCCATATTTGCAT...ATGGCCTATGGTTGGATGGTTGAGCACAAACACAGGCACCGTCACAAACACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR-3UTR TCA 90 bp CCACAGATACAGCGAATAACATCGTCGTCCTTCTCATGCCCATTCTCCTTTTCATACAGCCCTGCTTTCTaGTACTTCTTCTTTGGGGGA +
Preference number: 2 (lower is better)
Translates to: PQIQRITSSSFSCPFSFSYSPAF*YFFFGG
Trigger: TCCCCCAAAGAAGAAGTATCAGAAAGCAGGGCTGTA...TGAAAAGGAGAATGGGCATGAGAAGGACGACGATGTTATTCGCTGTATCTGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR TCA 90 bp GATCAAAAGCATAGGGTTTGGTGCAGACAGGATAGCGGTTCCGGTGGATCTTGTACTTCCTCCTGTTTTTaGCGAATCTTCTCCCAGTTT +
Preference number: 2 (lower is better)
Translates to: DQKHRVWCRQDSGSGGSCTSSCF*RIFSQF
Trigger: AAACTGGGAGAAGATTCGTCAAAAACAGGAGGAAGT...ACAAGATCCACCGGAACCGCTATCCTGTCTGCACCAAACCCTATGCTTTTGATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR GCA 90 bp AGCACAGCAGACACACAAGAACTACAGCGCATTAAAAACAGCATGTGTGCTGGCCCACTGGATCCCAGATaGTTGAGGTTCTCATTCTTT +
Preference number: 2 (lower is better)
Translates to: STADTQELQRIKNSMCAGPLDPR*LRFSFF
Trigger: AAAGAATGAGAACCTCAAGCATCTGGGATCCAGTGG...GCCAGCACACATGCTGTTTTTAATGCGCTGTAGTTCTTGTGTGTCTGCTGTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR GCA 90 bp ACGAGTCAGAGCATCGTCACCATAAGGGGAAATGTACAATTAGGACAGCATTGGGTGGGGTGGGGCAAATaGTATAAAGTACCAGTAGGT +
Preference number: 2 (lower is better)
Translates to: TSQSIVTIRGNVQLGQHWVGWGK*YKVPVG
Trigger: ACCTACTGGTACTTTATAGCATTTGCCCCACCCCAC...CCAATGCTGTCCTAATTGTACATTTCCCCTTATGGTGACGATGCTCTGACTCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR GCA 90 bp AAGAGACAGTATAGTCTGTTAACTTCTGGTCAAGAGAGTAGGAAGGAAGGAGACGCAGCTTCTTCGCAATaGCTGTGGGATCTGAGGATG +
Preference number: 2 (lower is better)
Translates to: KRQYSLLTSGQESRKEGDAASSQ*LWDLRM
Trigger: CATCCTCAGATCCCACAGGCATTGCGAAGAAGCTGC...GTCTCCTTCCTTCCTACTCTCTTGACCAGAAGTTAACAGACTATACTGTCTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR GCA 90 bp AAACGGGCTTGGACATGCGATTTTTCCAGCTCCACATGTGAGTATCTTATACCCGGCAGCAGTTACAAGTaGTTTGAGCTGTCAACTCAC +
Preference number: 2 (lower is better)
Translates to: KRAWTCDFSSSTCEYLIPGSSYK*FELSTH
Trigger: GTGAGTTGACAGCTCAAAGCACTTGTAACTGCTGCC...GGGTATAAGATACTCACATGTGGAGCTGGAAAAATCGCATGTCCAAGCCCGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR GCA 90 bp GACATGCAGACTAACTCTGTATCTATTTGCAGTGATGTAGTGCTTTGCCCCGCAGGCAGCAGTTACAAGTaGTTTGAGCTGTCAACTCAC +
Preference number: 2 (lower is better)
Translates to: DMQTNSVSICSDVVLCPAGSSYK*FELSTH
Trigger: GTGAGTTGACAGCTCAAAGCACTTGTAACTGCTGCC...TGCGGGGCAAAGCACTACATCACTGCAAATAGATACAGAGTTAGTCTGCATGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR GCA 90 bp CCAGTCCAACCACAGTGCCAAGTCCTAACTTCTTGCCAGACTCTTTATGCACTAAGTTACCAATCCAACTaGTGTGCTGATGGTTGGCTT +
Preference number: 2 (lower is better)
Translates to: PVQPQCQVLTSCQTLYALSYQSN*CADGWL
Trigger: AAGCCAACCATCAGCACAGCAGTTGGATTGGTAACT...TAGTGCATAAAGAGTCTGGCAAGAAGTTAGGACTTGGCACTGTGGTTGGACTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR-3UTR GCA 90 bp GTGTTTGTGCTCAACCATCCAACCATAGGCCATCTCAGGAGGAACACTGGGGTAATTGACCAATCCTACTaGTGCATTAAACACTGGCTT +
Preference number: 2 (lower is better)
Translates to: VFVLNHPTIGHLRRNTGVIDQSY*CIKHWL
Trigger: AAGCCAGTGTTTAATGCAGCAGTAGGATTGGTCAAT...TACCCCAGTGTTCCTCCTGAGATGGCCTATGGTTGGATGGTTGAGCACAAACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR-3UTR GCA 90 bp GGGGAAGGAGTAGCTTCTTTTAGAGATGTGAGTTCACTCAAGTGCGAAGGAGAAATGGAGCTGTGGATTTaGTCAACTTTGGCAATCGGC +
Preference number: 2 (lower is better)
Translates to: GEGVASFRDVSSLKCEGEMELWI*STLAIG
Trigger: GCCGATTGCCAAAGTTGAGCAAATCCACAGCTCCAT...TTCTCCTTCGCACTTGAGTGAACTCACATCTCTAAAAGAAGCTACTCCTTCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR-3UTR GCA 90 bp GACATGCAGACTAACTCTGTATCTATTTGCAGTGATGTAGTGCTTTGCCCCGCATTCCGAGCTTGGCGTTaGATAGCTTCCACTACACTT +
Preference number: 2 (lower is better)
Translates to: DMQTNSVSICSDVVLCPAFRAWR*IASTTL
Trigger: AAGTGTAGTGGAAGCTATGCAACGCCAAGCTCGGAA...TGCGGGGCAAAGCACTACATCACTGCAAATAGATACAGAGTTAGTCTGCATGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR GCA 90 bp GTAACTGTGTCAGGACTGAGGTGCAGTGCTGCTCCTTCCTCGTCTCTGTTCAATAGATTTTGTCGTAATTaGACATTTTCCGAGCTTGGC +
Preference number: 2 (lower is better)
Translates to: VTVSGLRCSAAPSSSLFNRFCRN*TFSELG
Trigger: GCCAAGCTCGGAAAATGTGCAATTACGACAAAATCT...ATTGAACAGAGACGAGGAAGGAGCAGCACTGCACCTCAGTCCTGACACAGTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR GCA 90 bp TGGGTCTGTAGTTTTGTAAACGTCAGAATACAGCCCTGCTTTCTGATACTTCTTAGGACTGAGGTGCAGTaGTGCTCCTTCCTCGTCTCT +
Preference number: 2 (lower is better)
Translates to: WVCSFVNVRIQPCFLILLRTEVQ*CSFLVS
Trigger: AGAGACGAGGAAGGAGCAGCACTGCACCTCAGTCCT...AAGAAGTATCAGAAAGCAGGGCTGTATTCTGACGTTTACAAAACTACAGACCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR GCA 90 bp CTGGATATACCTCCTGATGTCATTCAGGAGGGTGAGGGAAGATGGGCTAGGGGTCCACACTTACAAAGTTaGTGTTTTTCCACATTGAAG +
Preference number: 2 (lower is better)
Translates to: LDIPPDVIQEGEGRWARGPHLQS*CFSTLK
Trigger: CTTCAATGTGGAAAAACAGCAACTTTGTAAGTGTGG...ACCCCTAGCCCATCTTCCCTCACCCTCCTGAATGACATCAGGAGGTATATCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR GCA 90 bp GCACAGCAGACACACAAGAACTACAGCGCATTAAAAACAGCATGTGTGCTGGCGATACAATCACAGTGCTaGCATACCATGCACTTGTCA +
Preference number: 2 (lower is better)
Translates to: AQQTHKNYSALKTACVLAIQSQC*HTMHLS
Trigger: TGACAAGTGCATGGTATGGCAGCACTGTGATTGTAT...CGCCAGCACACATGCTGTTTTTAATGCGCTGTAGTTCTTGTGTGTCTGCTGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CCA 90 bp GACATGCAGACTAACTCTGTATCTATTTGCAGTGATGTAGTGCTTTGCCCCGCATTCTGGTCATCAATGTaGTCCTCCCTCCTCTCTACA +
Preference number: 2 (lower is better)
Translates to: DMQTNSVSICSDVVLCPAFWSSM*SSLLST
Trigger: TGTAGAGAGGAGGGAGGACCACATTGATGACCAGAA...TGCGGGGCAAAGCACTACATCACTGCAAATAGATACAGAGTTAGTCTGCATGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR CCA 90 bp CAGTATAGTCTGTTAACTTCTGGTCAAGAGAGTAGGAAGGAAGGAGACACCCTGAGTACCAGTAGGTTCTaGTCATCAATGTGGTCCTCC +
Preference number: 2 (lower is better)
Translates to: QYSLLTSGQESRKEGDTLSTSRF*SSMWSS
Trigger: GGAGGACCACATTGATGACCAGAACCTACTGGTACT...CAGGGTGTCTCCTTCCTTCCTACTCTCTTGACCAGAAGTTAACAGACTATACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR CCA 90 bp ACTTTGACCTGGTTGGGCAAGAAAGGAGAGACAAACTTCCCTAGTCAGGTATCTAGTACCAGTAGGTTCTaGTCATCAATGTGGTCCTCC +
Preference number: 2 (lower is better)
Translates to: TLTWLGKKGETNFPSQVSSTSRF*SSMWSS
Trigger: GGAGGACCACATTGATGACCAGAACCTACTGGTACT...AGATACCTGACTAGGGAAGTTTGTCTCTCCTTTCTTGCCCAACCAGGTCAAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR CCA 90 bp AAACGGGCTTGGACATGCGATTTTTCCAGCTCCACATGTGAGTATCTTATACCCAGTACCAGTAGGTTCTaGTCATCAATGTGGTCCTCC +
Preference number: 2 (lower is better)
Translates to: KRAWTCDFSSSTCEYLIPSTSRF*SSMWSS
Trigger: GGAGGACCACATTGATGACCAGAACCTACTGGTACT...GGGTATAAGATACTCACATGTGGAGCTGGAAAAATCGCATGTCCAAGCCCGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR CCA 90 bp TGGGGTAGGAATAGGGATCCTGGCCCTATCCCTTTGGATTTTGAGTTATACCTGGAAAAACCTAAGCTGTaGGGTGGGGCAAATGCTATA +
Preference number: 2 (lower is better)
Translates to: WGRNRDPGPIPLDFELYLEKPKL*GGANAI
Trigger: TATAGCATTTGCCCCACCCCACAGCTTAGGTTTTTC...CAGGTATAACTCAAAATCCAAAGGGATAGGGCCAGGATCCCTATTCCTACCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR CCA 90 bp GTCAGGTATCTAGGAAGAAGCCTCAGCTACTGTTTCTGTTTAAGGTCTCTGGGGGAAAAACCTAAGCTGTaGGGTGGGGCAAATGCTATA +
Preference number: 2 (lower is better)
Translates to: VRYLGRSLSYCFCLRSLGEKPKL*GGANAI
Trigger: TATAGCATTTGCCCCACCCCACAGCTTAGGTTTTTC...CCCCAGAGACCTTAAACAGAAACAGTAGCTGAGGCTTCTTCCTAGATACCTGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR CCA 90 bp ACTTTGACCTGGTTGGGCAAGAAAGGAGAGACAAACTTCCCTAGTCAGGTATCTTCTTCGCAATGCCTGTaGGATCTGAGGATGACAGAA +
Preference number: 2 (lower is better)
Translates to: TLTWLGKKGETNFPSQVSSSQCL*DLRMTE
Trigger: TTCTGTCATCCTCAGATCCCACAGGCATTGCGAAGA...AGATACCTGACTAGGGAAGTTTGTCTCTCCTTTCTTGCCCAACCAGGTCAAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR CCA 90 bp ACGAGTCAGAGCATCGTCACCATAAGGGGAAATGTACAATTAGGACAGCATTGGTCTTCGCAATGCCTGTaGGATCTGAGGATGACAGAA +
Preference number: 2 (lower is better)
Translates to: TSQSIVTIRGNVQLGQHWSSQCL*DLRMTE
Trigger: TTCTGTCATCCTCAGATCCCACAGGCATTGCGAAGA...CCAATGCTGTCCTAATTGTACATTTCCCCTTATGGTGACGATGCTCTGACTCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR CCA 90 bp GGTTGGGCAAGAAAGGAGAGACAAACTTCCCTAGTCAGGTATCTAGGAAGAAGCCTGGCCCTATCCCTTTaGATTTTGAGTTATACCTGG +
Preference number: 2 (lower is better)
Translates to: GWARKERQTSLVRYLGRSLALSL*ILSYTW
Trigger: CCAGGTATAACTCAAAATCCAAAGGGATAGGGCCAG...GCTTCTTCCTAGATACCTGACTAGGGAAGTTTGTCTCTCCTTTCTTGCCCAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR CCA 90 bp AGCACAGCAGACACACAAGAACTACAGCGCATTAAAAACAGCATGTGTGCTGGCCTGGCCCTATCCCTTTaGATTTTGAGTTATACCTGG +
Preference number: 2 (lower is better)
Translates to: STADTQELQRIKNSMCAGLALSL*ILSYTW
Trigger: CCAGGTATAACTCAAAATCCAAAGGGATAGGGCCAG...GCCAGCACACATGCTGTTTTTAATGCGCTGTAGTTCTTGTGTGTCTGCTGTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR CCA 90 bp TCCCTCCTCTCTACATTATTAACCCTTAAGGTGAAGCAATGGAGAAGAAAATTAGCCCTTCTGACCCCATaGGGGCCTTCCCTATCCCAT +
Preference number: 2 (lower is better)
Translates to: SLLSTLLTLKVKQWRRKLALLTP*GPSLSH
Trigger: ATGGGATAGGGAAGGCCCCCATGGGGTCAGAAGGGC...TAATTTTCTTCTCCATTGCTTCACCTTAAGGGTTAATAATGTAGAGAGGAGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR CCA 90 bp ACGAGTCAGAGCATCGTCACCATAAGGGGAAATGTACAATTAGGACAGCATTGGAGGAAGGAGACACCCTaGATATACCTCCTGATGTCA +
Preference number: 2 (lower is better)
Translates to: TSQSIVTIRGNVQLGQHWRKETP*IYLLMS
Trigger: TGACATCAGGAGGTATATCCAGGGTGTCTCCTTCCT...CCAATGCTGTCCTAATTGTACATTTCCCCTTATGGTGACGATGCTCTGACTCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR CCA 90 bp CCCAGATGCTTGAGGTTCTCATTCTTTGAGGGTCACTTTCGAAAGCTGTTTTCTCCACTCAAACGGGCTTaGACATGCGATTTTTCCAGC +
Preference number: 2 (lower is better)
Translates to: PRCLRFSFFEGHFRKLFSPLKRA*TCDFSS
Trigger: GCTGGAAAAATCGCATGTCCAAGCCCGTTTGAGTGG...AGAAAACAGCTTTCGAAAGTGACCCTCAAAGAATGAGAACCTCAAGCATCTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CCA 90 bp TGCATCACTACTTACAGGGCTCTGACCTCCACTAGTCCCAGAAGACTGAGAGCATTTCAAAAGTTTTGCTaGTGGCACTATCTTTCAGGG +
Preference number: 2 (lower is better)
Translates to: CITTYRALTSTSPRRLRAFQKFC*WHYLSG
Trigger: CCCTGAAAGATAGTGCCACCAGCAAAACTTTTGAAA...TGCTCTCAGTCTTCTGGGACTAGTGGAGGTCAGAGCCCTGTAAGTAGTGATGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR-3UTR CCA 90 bp GCCGATTTAGTGAAGTGTCCTGTGCAGAAAAGAGTCCAGGGCTGTCAGTTAATTTGCTTGGACTTTCAGTaGCAACAAATGGAGCCACTG +
Preference number: 2 (lower is better)
Translates to: ADLVKCPVQKRVQGCQLICLDFQ*QQMEPL
Trigger: CAGTGGCTCCATTTGTTGCCACTGAAAGTCCAAGCA...AATTAACTGACAGCCCTGGACTCTTTTCTGCACAGGACACTTCACTAAATCGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR-3UTR CCA 90 bp GCTCCAAGGCTTATTAAGTACCTAATGTCAACAACATGGCCCCATTCCCCTTGCTTCTCCATGGGCTCTTaGTCCTCATTTTGTACCATC +
Preference number: 2 (lower is better)
Translates to: APRLIKYLMSTTWPHSPCFSMGS*SSFCTI
Trigger: GATGGTACAAAATGAGGACCAAGAGCCCATGGAGAA...GCAAGGGGAATGGGGCCATGTTGTTGACATTAGGTACTTAATAAGCCTTGGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CCA 90 bp TCCCTCCTCTCTACATTATTAACCCTTAAGGTGAAGCAATGGAGAAGAAAATTAGGCTACGGCCTGGACTaGAAGAAGGTGGTGCAGAGG +
Preference number: 2 (lower is better)
Translates to: SLLSTLLTLKVKQWRRKLGYGLD*KKVVQR
Trigger: CCTCTGCACCACCTTCTTCCAGTCCAGGCCGTAGCC...TAATTTTCTTCTCCATTGCTTCACCTTAAGGGTTAATAATGTAGAGAGGAGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CCA 90 bp ACACACAAGAACTACAGCGCATTAAAAACAGCATGTGTGCTGGCGGGGGCCTGGACTGGGAATCTCAACTaGTGCTTCATTAAAGCTTTT +
Preference number: 2 (lower is better)
Translates to: THKNYSALKTACVLAGAWTGNLN*CFIKAF
Trigger: AAAAGCTTTAATGAAGCACCAGTTGAGATTCCCAGT...CCAGGCCCCCGCCAGCACACATGCTGTTTTTAATGCGCTGTAGTTCTTGTGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CCA 90 bp AAACGGGCTTGGACATGCGATTTTTCCAGCTCCACATGTGAGTATCTTATACCCTTCAGAAGGTTTAGCTaGGGTTTCAGAAGGACTGGG +
Preference number: 2 (lower is better)
Translates to: KRAWTCDFSSSTCEYLIPFRRFS*GFRRTG
Trigger: CCCAGTCCTTCTGAAACCCCAGCTAAACCTTCTGAA...GGGTATAAGATACTCACATGTGGAGCTGGAAAAATCGCATGTCCAAGCCCGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CCA 90 bp CCCATAGTACTTCTCAGCATTCCGAAAGACTTTGAGCATGTCAGCATCAAAAGCTGCCTCTGTATCCTCTaGTTACAGCATTGCTCGCCA +
Preference number: 2 (lower is better)
Translates to: PIVLLSIPKDFEHVSIKSCLCIL*LQHCSP
Trigger: TGGCGAGCAATGCTGTAACCAGAGGATACAGAGGCA...GCTTTTGATGCTGACATGCTCAAAGTCTTTCGGAATGCTGAGAAGTACTATGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CCA 90 bp CCCAGATGCTTGAGGTTCTCATTCTTTGAGGGTCACTTTCGAAAGCTGTTTTCTACAATCTCATCAATCTaGGCTGATGCCTCATGCCGG +
Preference number: 2 (lower is better)
Translates to: PRCLRFSFFEGHFRKLFSTISSI*ADASCR
Trigger: CCGGCATGAGGCATCAGCCCAGATTGATGAGATTGT...AGAAAACAGCTTTCGAAAGTGACCCTCAAAGAATGAGAACCTCAAGCATCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CCA 90 bp CCCAGATGCTTGAGGTTCTCATTCTTTGAGGGTCACTTTCGAAAGCTGTTTTCTAGAGCATCATCCTCCTaGCCCAAGTCTTTTAGGGGT +
Preference number: 2 (lower is better)
Translates to: PRCLRFSFFEGHFRKLFSRASSS*PKSFRG
Trigger: ACCCCTAAAAGACTTGGGCCAGGAGGATGATGCTCT...AGAAAACAGCTTTCGAAAGTGACCCTCAAAGAATGAGAACCTCAAGCATCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR CAA 90 bp ATTATTCCAGCTACAGAGCCAACACCTGCTTTCCTGATCAAATCCTaGCTAACCAATCCTGCTGTAGTGCCAGTTCCTAACTTCTTCGGT +
Preference number: 2 (lower is better)
Translates to: IIPATEPTPAFLIKS*LTNPAVVPVPNFFG
Trigger: ACCGAAGAAGTTAGGAACTGGCACTACAGCAGGATTGGTTAGCAAGGATTTGATCAGGAAAGCAGGTGTTGGCTCTGTAGCTGGAATAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR CAA 90 bp CTTGTGAAAAGGTTTGTATGTTCATCACTGCTGGCTGGCTCAGAGTaGGGAGTGAATCCTCCAAGGGATAAGCTTGGAGAACTTTCTGAA +
Preference number: 2 (lower is better)
Translates to: LVKRFVCSSLLAGSE*GVNPPRDKLGELSE
Trigger: TTCAGAAAGTTCTCCAAGCTTATCCCTTGGAGGATTCACTCCCAACTCTGAGCCAGCCAGCAGTGATGAACATACAAACCTTTTCACAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR-3UTR TCA 90 bp GATCAAAAGCATAGGGTTTGGTGCAGACAGGATAGCGGTTCCGGTGGATCTTGTTATCCCTTTGGATTTTaGGTTATACCTGGGTATAGG +
Preference number: 2 (lower is better)
Translates to: DQKHRVWCRQDSGSGGSCYPFGF*VIPGYR
Trigger: CCTATACCCAGGTATAACTCAAAATCCAAAGGGATA...ACAAGATCCACCGGAACCGCTATCCTGTCTGCACCAAACCCTATGCTTTTGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR TCA 90 bp GGGGAAGGAGTAGCTTCTTTTAGAGATGTGAGTTCACTCAAGTGCGAAGGAGAATTTCTTGTACAACTTTaGAGGGTCGCCTGTAATCCC +
Preference number: 2 (lower is better)
Translates to: GEGVASFRDVSSLKCEGEFLVQL*RVACNP
Trigger: GGGATTACAGGCGACCCTTCAAAGTTGTACAAGAAA...TTCTCCTTCGCACTTGAGTGAACTCACATCTCTAAAAGAAGCTACTCCTTCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR-3UTR TCA 90 bp GCCGATTTAGTGAAGTGTCCTGTGCAGAAAAGAGTCCAGGGCTGTCAGTTAATTTTATGGCATCTTTACTaGTCAGACCTGCCAAAGGAC +
Preference number: 2 (lower is better)
Translates to: ADLVKCPVQKRVQGCQLILWHLY*SDLPKD
Trigger: GTCCTTTGGCAGGTCTGATCAGTAAAGATGCCATAA...AATTAACTGACAGCCCTGGACTCTTTTCTGCACAGGACACTTCACTAAATCGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR-3UTR TCA 90 bp AGAGAACTGGGTCATGAAGACATCAGACTTGATATTCCCATCATCTCGGCAGATTGTTCAATTCTGGGTTaGCAAACTGAGCAGCCTGGA +
Preference number: 2 (lower is better)
Translates to: RELGHEDIRLDIPIISADCSILG*QTEQPG
Trigger: TCCAGGCTGCTCAGTTTGTCAACCCAGAATTGAACA...ATCTGCCGAGATGATGGGAATATCAAGTCTGATGTCTTCATGACCCAGTTCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR TCA 90 bp GCTCCAAGGCTTATTAAGTACCTAATGTCAACAACATGGCCCCATTCCCCTTGCAGTTATAATCATAAGTaGGTTCAGTCCCAGCTGGCA +
Preference number: 2 (lower is better)
Translates to: APRLIKYLMSTTWPHSPCSYNHK*VQSQLA
Trigger: TGCCAGCTGGGACTGAACTCACTTATGATTATAACT...GCAAGGGGAATGGGGCCATGTTGTTGACATTAGGTACTTAATAAGCCTTGGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR TCA 90 bp CCCATAGTACTTCTCAGCATTCCGAAAGACTTTGAGCATGTCAGCATCAAAAGCCATCACAAATTTCTTTaGAGATCTGGGCTAGGCGGG +
Preference number: 2 (lower is better)
Translates to: PIVLLSIPKDFEHVSIKSHHKFL*RSGLGG
Trigger: CCCGCCTAGCCCAGATCTTCAAAGAAATTTGTGATG...GCTTTTGATGCTGACATGCTCAAAGTCTTTCGGAATGCTGAGAAGTACTATGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR GCA 90 bp ACTTTGACCTGGTTGGGCAAGAAAGGAGAGACAAACTTCCCTAGTCAGGTATCTCCACTGGATCCCAGATaGTTGAGGTTCTCATTCTTT +
Preference number: 2 (lower is better)
Translates to: TLTWLGKKGETNFPSQVSPLDPR*LRFSFF
Trigger: AAAGAATGAGAACCTCAAGCATCTGGGATCCAGTGG...AGATACCTGACTAGGGAAGTTTGTCTCTCCTTTCTTGCCCAACCAGGTCAAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR GCA 90 bp AGACAAACTTCCCTAGTCAGGTATCTAGGAAGAAGCCTCAGCTACTGTTTCTGTGTGGGGTGGGGCAAATaGTATAAAGTACCAGTAGGT +
Preference number: 2 (lower is better)
Translates to: RQTSLVRYLGRSLSYCFCVGWGK*YKVPVG
Trigger: ACCTACTGGTACTTTATAGCATTTGCCCCACCCCAC...ACAGAAACAGTAGCTGAGGCTTCTTCCTAGATACCTGACTAGGGAAGTTTGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR GCA 90 bp TCCACATGTGAGTATCTTATACCCAGGTCTCTTAGTAATGTACAGTGCTTCTCTGCAGCTTCTTCGCAATaGCTGTGGGATCTGAGGATG +
Preference number: 2 (lower is better)
Translates to: STCEYLIPRSLSNVQCFSAASSQ*LWDLRM
Trigger: CATCCTCAGATCCCACAGGCATTGCGAAGAAGCTGC...AGAGAAGCACTGTACATTACTAAGAGACCTGGGTATAAGATACTCACATGTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR GCA 90 bp TATATTAGCAGCATTTATATTTTCCGCAATCACACAGCCTACAGACATGCAGACTTGCAAGAACTACCGTaGCCTTCTGACCCCATGGGG +
Preference number: 2 (lower is better)
Translates to: YISSIYIFRNHTAYRHADLQELP*PSDPMG
Trigger: CCCCATGGGGTCAGAAGGGCACGGTAGTTCTTGCAA...GTCTGCATGTCTGTAGGCTGTGTGATTGCGGAAAATATAAATGCTGCTAATATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR GCA 90 bp TCTGTGTTTGTGACGGTGCCTGTGTTTGTGCTCAACCATCCAACCATAGGCCATTTTCAGATTCTAGCTTaGTTGGACTTTCAGTGGCAA +
Preference number: 2 (lower is better)
Translates to: SVFVTVPVFVLNHPTIGHFQILA*LDFQWQ
Trigger: TTGCCACTGAAAGTCCAAGCAAGCTAGAATCTGAAA...ATGGCCTATGGTTGGATGGTTGAGCACAAACACAGGCACCGTCACAAACACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR-3UTR GCA 90 bp GTCTGTAGTTTTGTAAACGTCAGAATACAGCCCTGCTTTCTGATACTTCTTCTTAGGACTGAGGTGCAGTaGTGCTCCTTCCTCGTCTCT +
Preference number: 2 (lower is better)
Translates to: VCSFVNVRIQPCFLILLLRTEVQ*CSFLVS
Trigger: AGAGACGAGGAAGGAGCAGCACTGCACCTCAGTCCT...AAGAAGAAGTATCAGAAAGCAGGGCTGTATTCTGACGTTTACAAAACTACAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR GCA 90 bp CTGGGTCATGAAGACATCAGACTTGATATTCCCATCATCTCGGCAGATCCCATTCATTGCACCCATTCATaGCTCTGTATCCTCTGGTTA +
Preference number: 2 (lower is better)
Translates to: LGHEDIRLDIPIISADPIHCTHS*LCILWL
Trigger: TAACCAGAGGATACAGAGGCATGAATGGGTGCAATG...AATGGGATCTGCCGAGATGATGGGAATATCAAGTCTGATGTCTTCATGACCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CCA 90 bp TTCCCTAGTCAGGTATCTAGGAAGAAGCCTCAGCTACTGTTTCTGTTTAAGGTCAGTACCAGTAGGTTCTaGTCATCAATGTGGTCCTCC +
Preference number: 2 (lower is better)
Translates to: FPSQVSRKKPQLLFLFKVSTSRF*SSMWSS
Trigger: GGAGGACCACATTGATGACCAGAACCTACTGGTACT...GACCTTAAACAGAAACAGTAGCTGAGGCTTCTTCCTAGATACCTGACTAGGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR CCA 90 bp AAACGGGCTTGGACATGCGATTTTTCCAGCTCCACATGTGAGTATCTTATACCCGAAAAACCTAAGCTGTaGGGTGGGGCAAATGCTATA +
Preference number: 2 (lower is better)
Translates to: KRAWTCDFSSSTCEYLIPEKPKL*GGANAI
Trigger: TATAGCATTTGCCCCACCCCACAGCTTAGGTTTTTC...GGGTATAAGATACTCACATGTGGAGCTGGAAAAATCGCATGTCCAAGCCCGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR CCA 90 bp ACGAGTCAGAGCATCGTCACCATAAGGGGAAATGTACAATTAGGACAGCATTGGGAAAAACCTAAGCTGTaGGGTGGGGCAAATGCTATA +
Preference number: 2 (lower is better)
Translates to: TSQSIVTIRGNVQLGQHWEKPKL*GGANAI
Trigger: TATAGCATTTGCCCCACCCCACAGCTTAGGTTTTTC...CCAATGCTGTCCTAATTGTACATTTCCCCTTATGGTGACGATGCTCTGACTCGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR CCA 90 bp AGACAAACTTCCCTAGTCAGGTATCTAGGAAGAAGCCTCAGCTACTGTTTCTGTTCTTCGCAATGCCTGTaGGATCTGAGGATGACAGAA +
Preference number: 2 (lower is better)
Translates to: RQTSLVRYLGRSLSYCFCSSQCL*DLRMTE
Trigger: TTCTGTCATCCTCAGATCCCACAGGCATTGCGAAGA...ACAGAAACAGTAGCTGAGGCTTCTTCCTAGATACCTGACTAGGGAAGTTTGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR CCA 90 bp TTCCCTAGTCAGGTATCTAGGAAGAAGCCTCAGCTACTGTTTCTGTTTAAGGTCTCTTCGCAATGCCTGTaGGATCTGAGGATGACAGAA +
Preference number: 2 (lower is better)
Translates to: FPSQVSRKKPQLLFLFKVSSQCL*DLRMTE
Trigger: TTCTGTCATCCTCAGATCCCACAGGCATTGCGAAGA...GACCTTAAACAGAAACAGTAGCTGAGGCTTCTTCCTAGATACCTGACTAGGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR CCA 90 bp GACATGCAGACTAACTCTGTATCTATTTGCAGTGATGTAGTGCTTTGCCCCGCACTGGCCCTATCCCTTTaGATTTTGAGTTATACCTGG +
Preference number: 2 (lower is better)
Translates to: DMQTNSVSICSDVVLCPALALSL*ILSYTW
Trigger: CCAGGTATAACTCAAAATCCAAAGGGATAGGGCCAG...TGCGGGGCAAAGCACTACATCACTGCAAATAGATACAGAGTTAGTCTGCATGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR CCA 90 bp AGACAAACTTCCCTAGTCAGGTATCTAGGAAGAAGCCTCAGCTACTGTTTCTGTCTCTGGGGTAGCTCTTaGAGCCAACAGAGAATAGAT +
Preference number: 2 (lower is better)
Translates to: RQTSLVRYLGRSLSYCFCLWGSS*SQQRID
Trigger: ATCTATTCTCTGTTGGCTCCAAGAGCTACCCCAGAG...ACAGAAACAGTAGCTGAGGCTTCTTCCTAGATACCTGACTAGGGAAGTTTGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR CCA 90 bp AACAAAAGAAACCACTCAAACGGGCTTGGACATGCGATTTTTCCAGCTCCACATCTCTGGGGTAGCTCTTaGAGCCAACAGAGAATAGAT +
Preference number: 2 (lower is better)
Translates to: NKRNHSNGLGHAIFPAPHLWGSS*SQQRID
Trigger: ATCTATTCTCTGTTGGCTCCAAGAGCTACCCCAGAG...ATGTGGAGCTGGAAAAATCGCATGTCCAAGCCCGTTTGAGTGGTTTCTTTTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR CCA 90 bp AAGAGACAGTATAGTCTGTTAACTTCTGGTCAAGAGAGTAGGAAGGAAGGAGACCCCATGATTCCATTTTaGGGAGTAGAGGTAGGGAGG +
Preference number: 2 (lower is better)
Translates to: KRQYSLLTSGQESRKEGDPMIPF*GVEVGR
Trigger: CCTCCCTACCTCTACTCCCCAAAATGGAATCATGGG...GTCTCCTTCCTTCCTACTCTCTTGACCAGAAGTTAACAGACTATACTGTCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR CCA 90 bp GGGGAAGGAGTAGCTTCTTTTAGAGATGTGAGTTCACTCAAGTGCGAAGGAGAATCTTCGGTTTTGTCTTaGAAGACTTGGAAGGAGGAC +
Preference number: 2 (lower is better)
Translates to: GEGVASFRDVSSLKCEGESSVLS*KTWKED
Trigger: GTCCTCCTTCCAAGTCTTCCAAGACAAAACCGAAGA...TTCTCCTTCGCACTTGAGTGAACTCACATCTCTAAAAGAAGCTACTCCTTCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR-3UTR CCA 90 bp GTGCATAAAAGGCATTTCAGCCATTGCCTCCCTCATCTTAGGGGGTCTCCCTCTCCGTATTATGGAGTTTaGATTGCACTTTCCCTTTAT +
Preference number: 2 (lower is better)
Translates to: VHKRHFSHCLPHLRGSPSPYYGV*IALSLY
Trigger: ATAAAGGGAAAGTGCAATCCAAACTCCATAATACGG...AGAGGGAGACCCCCTAAGATGAGGGAGGCAATGGCTGAAATGCCTTTTATGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR-3UTR CCA 90 bp TGCATCACTACTTACAGGGCTCTGACCTCCACTAGTCCCAGAAGACTGAGAGCACTGACATTTATCTGTTaGCCCAATTTAGAGCCAAAT +
Preference number: 2 (lower is better)
Translates to: CITTYRALTSTSPRRLRALTFIC*PNLEPN
Trigger: ATTTGGCTCTAAATTGGGCCAACAGATAAATGTCAG...TGCTCTCAGTCTTCTGGGACTAGTGGAGGTCAGAGCCCTGTAAGTAGTGATGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR-3UTR CCA 90 bp GCCGATTTAGTGAAGTGTCCTGTGCAGAAAAGAGTCCAGGGCTGTCAGTTAATTGATTCGAAAGATAGTTaGCAGAAGATCTCGGGGGAT +
Preference number: 2 (lower is better)
Translates to: ADLVKCPVQKRVQGCQLIDSKDS*QKISGD
Trigger: ATCCCCCGAGATCTTCTGCCAACTATCTTTCGAATC...AATTAACTGACAGCCCTGGACTCTTTTCTGCACAGGACACTTCACTAAATCGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR-3UTR CCA 90 bp TTGGAGAACTTTCTGAACAGTCAATCTGTAAAGGTGTCTGCAATCCCAAGGCCAGTGTCCATAGAAACCTaGGGTTGTTCAGAAGAACGG +
Preference number: 2 (lower is better)
Translates to: LENFLNSQSVKVSAIPRPVSIET*GCSEER
Trigger: CCGTTCTTCTGAACAACCCCAGGTTTCTATGGACAC...TGGCCTTGGGATTGCAGACACCTTTACAGATTGACTGTTCAGAAAGTTCTCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR-3UTR CCA 90 bp CCCATAGTACTTCTCAGCATTCCGAAAGACTTTGAGCATGTCAGCATCAAAAGCGGGTTTCAGAAGGACTaGGAATCTCAACTGGTGCTT +
Preference number: 2 (lower is better)
Translates to: PIVLLSIPKDFEHVSIKSGFQKD*ESQLVL
Trigger: AAGCACCAGTTGAGATTCCCAGTCCTTCTGAAACCC...GCTTTTGATGCTGACATGCTCAAAGTCTTTCGGAATGCTGAGAAGTACTATGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CCA 90 bp CTGGGTCATGAAGACATCAGACTTGATATTCCCATCATCTCGGCAGATCCCATTGAGTTCAGTCCCAGCTaGCATGTCTTTAAGAGCATA +
Preference number: 2 (lower is better)
Translates to: LGHEDIRLDIPIISADPIEFSPS*HVFKSI
Trigger: TATGCTCTTAAAGACATGCCAGCTGGGACTGAACTC...AATGGGATCTGCCGAGATGATGGGAATATCAAGTCTGATGTCTTCATGACCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CCA 90 bp ATATTTTCACTGGGTTCCTCAGAGAGATGGCCTCTCCTTTTCTTCAGCTTGTGCGAGTTCAGTCCCAGCTaGCATGTCTTTAAGAGCATA +
Preference number: 2 (lower is better)
Translates to: IFSLGSSERWPLLFFSLCEFSPS*HVFKSI
Trigger: TATGCTCTTAAAGACATGCCAGCTGGGACTGAACTC...GCACAAGCTGAAGAAAAGGAGAGGCCATCTCTCTGAGGAACCCAGTGAAAATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CCA 90 bp CGAATAACATCGTCGTCCTTCTCATGCCCATTCTCCTTTTCAGAGACTGAGGTCGGGGGTCAATCTAGTTaGGGTGTTGATATTTTCACT +
Preference number: 2 (lower is better)
Translates to: RITSSSFSCPFSFSETEVGGQSS*GVDIFT
Trigger: AGTGAAAATATCAACACCCCAACTAGATTGACCCCC...GACCTCAGTCTCTGAAAAGGAGAATGGGCATGAGAAGGACGACGATGTTATTCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CCA 90 bp AAACGGGCTTGGACATGCGATTTTTCCAGCTCCACATGTGAGTATCTTATACCCAACATCTCTCCCAACTaGGGATTTACGCCCATAGTA +
Preference number: 2 (lower is better)
Translates to: KRAWTCDFSSSTCEYLIPNISPN*GFTPIV
Trigger: TACTATGGGCGTAAATCCCCAGTTGGGAGAGATGTT...GGGTATAAGATACTCACATGTGGAGCTGGAAAAATCGCATGTCCAAGCCCGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR CAA 90 bp ACCAATCCCATTGCTGAACTTGCTACAATCTTCTTTGCACAGTCCTaGGCCACTAGGCCAACAGTAGAACCCAATTTCTTTCCCAAATCT +
Preference number: 2 (lower is better)
Translates to: TNPIAELATIFFAQS*ATRPTVEPNFFPKS
Trigger: AGATTTGGGAAAGAAATTGGGTTCTACTGTTGGCCTAGTGGCCAAGGACTGTGCAAAGAAGATTGTAGCAAGTTCAGCAATGGGATTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR CAA 90 bp CTGGTTAAAGGATTAACAGATACAGTAGGTGATGGGGAAGGGAGATaGCTTTCTCCTACTGCACTGAATGGGGATTTAGCGGTAGATACA +
Preference number: 2 (lower is better)
Translates to: LVKGLTDTVGDGEGR*LSPTALNGDLAVDT
Trigger: TGTATCTACCGCTAAATCCCCATTCAGTGCAGTAGGAGAAAGCAATCTCCCTTCCCCATCACCTACTGTATCTGTTAATCCTTTAACCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR CAA 90 bp AATCACTGCTACTTCTATGGTTGTCACTTTCAGATTCTAGCTTGCTaGGACTTTCAGTGGCAACAAATGGAGCCACTGACAGTACAGGTG +
Preference number: 2 (lower is better)
Translates to: NHCYFYGCHFQILAC*DFQWQQMEPLTVQV
Trigger: CACCTGTACTGTCAGTGGCTCCATTTGTTGCCACTGAAAGTCCAAGCAAGCTAGAATCTGAAAGTGACAACCATAGAAGTAGCAGTGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR CAA 90 bp GAACAGCTGCTTGTCAACTTTTCAGATAGGAGTGAGATGCTATTATaGCAAGAGTCACTTGTGACTGCAGGCACTAAAAGGCTGTCTGGT +
Preference number: 2 (lower is better)
Translates to: EQLLVNFSDRSEMLL*QESLVTAGTKRLSG
Trigger: ACCAGACAGCCTTTTAGTGCCTGCAGTCACAAGTGACTCTTGCAATAATAGCATCTCACTCCTATCTGAAAAGTTGACAAGCAGCTGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR TCA 90 bp GCCGATTTAGTGAAGTGTCCTGTGCAGAAAAGAGTCCAGGGCTGTCAGTTAATTCTTCTTTTAGAGATGTaGGTTCACTCAAGTGCGAAG +
Preference number: 2 (lower is better)
Translates to: ADLVKCPVQKRVQGCQLILLLEM*VHSSAK
Trigger: CTTCGCACTTGAGTGAACTCACATCTCTAAAAGAAG...AATTAACTGACAGCCCTGGACTCTTTTCTGCACAGGACACTTCACTAAATCGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR-3UTR TCA 90 bp AACATCTCTCCCAACTGGGGATTTACGCCCATAGTACTTCTCAGCATTCCGAAAAGTTATAATCATAAGTaGGTTCAGTCCCAGCTGGCA +
Preference number: 2 (lower is better)
Translates to: NISPNWGFTPIVLLSIPKSYNHK*VQSQLA
Trigger: TGCCAGCTGGGACTGAACTCACTTATGATTATAACT...TTTCGGAATGCTGAGAAGTACTATGGGCGTAAATCCCCAGTTGGGAGAGATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR GCA 90 bp AAGAGACAGTATAGTCTGTTAACTTCTGGTCAAGAGAGTAGGAAGGAAGGAGACGTGGGGTGGGGCAAATaGTATAAAGTACCAGTAGGT +
Preference number: 2 (lower is better)
Translates to: KRQYSLLTSGQESRKEGDVGWGK*YKVPVG
Trigger: ACCTACTGGTACTTTATAGCATTTGCCCCACCCCAC...GTCTCCTTCCTTCCTACTCTCTTGACCAGAAGTTAACAGACTATACTGTCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR GCA 90 bp TATATTAGCAGCATTTATATTTTCCGCAATCACACAGCCTACAGACATGCAGACGCAGCTTCTTCGCAATaGCTGTGGGATCTGAGGATG +
Preference number: 2 (lower is better)
Translates to: YISSIYIFRNHTAYRHADAASSQ*LWDLRM
Trigger: CATCCTCAGATCCCACAGGCATTGCGAAGAAGCTGC...GTCTGCATGTCTGTAGGCTGTGTGATTGCGGAAAATATAAATGCTGCTAATATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR GCA 90 bp ACGAGTCAGAGCATCGTCACCATAAGGGGAAATGTACAATTAGGACAGCATTGGTGTAGTGACTTTTGTTaGAGGGGTGGGTTTAGAGTT +
Preference number: 2 (lower is better)
Translates to: TSQSIVTIRGNVQLGQHWCSDFC*RGGFRV
Trigger: AACTCTAAACCCACCCCTGCAACAAAAGTCACTACA...CCAATGCTGTCCTAATTGTACATTTCCCCTTATGGTGACGATGCTCTGACTCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR GCA 90 bp TGGGGTAGGAATAGGGATCCTGGCCCTATCCCTTTGGATTTTGAGTTATACCTGAGATTTTGTCGTAATTaGACATTTTCCGAGCTTGGC +
Preference number: 2 (lower is better)
Translates to: WGRNRDPGPIPLDFELYLRFCRN*TFSELG
Trigger: GCCAAGCTCGGAAAATGTGCAATTACGACAAAATCT...CAGGTATAACTCAAAATCCAAAGGGATAGGGCCAGGATCCCTATTCCTACCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CCA 90 bp TTCCCTAGTCAGGTATCTAGGAAGAAGCCTCAGCTACTGTTTCTGTTTAAGGTCGAAAAACCTAAGCTGTaGGGTGGGGCAAATGCTATA +
Preference number: 2 (lower is better)
Translates to: FPSQVSRKKPQLLFLFKVEKPKL*GGANAI
Trigger: TATAGCATTTGCCCCACCCCACAGCTTAGGTTTTTC...GACCTTAAACAGAAACAGTAGCTGAGGCTTCTTCCTAGATACCTGACTAGGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR CCA 90 bp TTCCCTAGTCAGGTATCTAGGAAGAAGCCTCAGCTACTGTTTCTGTTTAAGGTCCTGGCCCTATCCCTTTaGATTTTGAGTTATACCTGG +
Preference number: 2 (lower is better)
Translates to: FPSQVSRKKPQLLFLFKVLALSL*ILSYTW
Trigger: CCAGGTATAACTCAAAATCCAAAGGGATAGGGCCAG...GACCTTAAACAGAAACAGTAGCTGAGGCTTCTTCCTAGATACCTGACTAGGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR CCA 90 bp TGTATTGCTTACCAATCACACAGCAGGTGTGTGTGTGTGTGTGTATATATATACGAGGGTGAGGGAAGATaGGCTAGGGGTGAAGAGAAA +
Preference number: 2 (lower is better)
Translates to: CIAYQSHSRCVCVCVYIYEGEGR*ARGEEK
Trigger: TTTCTCTTCACCCCTAGCCCATCTTCCCTCACCCTC...GTATATATATACACACACACACACACACCTGCTGTGTGATTGGTAAGCAATACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR CCA 90 bp GATAAAGAGTGGGAGGATACCTTCCATAGTAACCTAATCCTATGGGAGCAGCTGATGAGACTCACTGATTaGGGAAGGAGTAGCTTCTTT +
Preference number: 2 (lower is better)
Translates to: DKEWEDTFHSNLILWEQLMRLTD*GRSSFF
Trigger: AAAGAAGCTACTCCTTCCCCAATCAGTGAGTCTCAT...CAGCTGCTCCCATAGGATTAGGTTACTATGGAAGGTATCCTCCCACTCTTTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR-3UTR CCA 90 bp TTGGAGAACTTTCTGAACAGTCAATCTGTAAAGGTGTCTGCAATCCCAAGGCCAGAGGTGGATAAAGAGTaGGAGGATACCTTCCATAGT +
Preference number: 2 (lower is better)
Translates to: LENFLNSQSVKVSAIPRPEVDKE*EDTFHS
Trigger: ACTATGGAAGGTATCCTCCCACTCTTTATCCACCTC...TGGCCTTGGGATTGCAGACACCTTTACAGATTGACTGTTCAGAAAGTTCTCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR-3UTR CCA 90 bp AACATCTCTCCCAACTGGGGATTTACGCCCATAGTACTTCTCAGCATTCCGAAAAGTTATTCCCTGTCCTaGCCTGCCTTTGAAGTTTTT +
Preference number: 2 (lower is better)
Translates to: NISPNWGFTPIVLLSIPKSYSLS*PAFEVF
Trigger: AAAAACTTCAAAGGCAGGCCAGGACAGGGAATAACT...TTTCGGAATGCTGAGAAGTACTATGGGCGTAAATCCCCAGTTGGGAGAGATGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CCA 90 bp TGGCTAGAACCTCTTCAATCAAGGGTAGAGCATCATCCTCCTGGCCCAAGTCTTGATCAATCGACTCTTTaGGTCTGTAGTTTTGTAAAC +
Preference number: 2 (lower is better)
Translates to: WLEPLQSRVEHHPPGPSLDQSTL*VCSFVN
Trigger: GTTTACAAAACTACAGACCCAAAGAGTCGATTGATC...AAGACTTGGGCCAGGAGGATGATGCTCTACCCTTGATTGAAGAGGTTCTAGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CCA 90 bp TCCACATGTGAGTATCTTATACCCAGGTCTCTTAGTAATGTACAGTGCTTCTCTCACATGGGCAAGTGTTaGGGGAACACTCAGCAAAGA +
Preference number: 2 (lower is better)
Translates to: STCEYLIPRSLSNVQCFSHMGKC*GNTQQR
Trigger: TCTTTGCTGAGTGTTCCCCCAACACTTGCCCATGTG...AGAGAAGCACTGTACATTACTAAGAGACCTGGGTATAAGATACTCACATGTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR CAA 90 bp TTTCTTTGTGGCCAAGATTTTGTCGTAATTGCACATTTTCCGAGCTaGGCGTTGCATAGCTTCCACTACACTTCTCTTGATATGATGGGG +
Preference number: 2 (lower is better)
Translates to: FLCGQDFVVIAHFPS*ALHSFHYTSLDMMG
Trigger: CCCCATCATATCAAGAGAAGTGTAGTGGAAGCTATGCAACGCCAAGCTCGGAAAATGTGCAATTACGACAAAATCTTGGCCACAAAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR TCA 90 bp AACATCTCTCCCAACTGGGGATTTACGCCCATAGTACTTCTCAGCATTCCGAAATATCCCTTTGGATTTTaGGTTATACCTGGGTATAGG +
Preference number: 2 (lower is better)
Translates to: NISPNWGFTPIVLLSIPKYPFGF*VIPGYR
Trigger: CCTATACCCAGGTATAACTCAAAATCCAAAGGGATA...TTTCGGAATGCTGAGAAGTACTATGGGCGTAAATCCCCAGTTGGGAGAGATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR TCA 90 bp ACTTTGACCTGGTTGGGCAAGAAAGGAGAGACAAACTTCCCTAGTCAGGTATCTTATCCCTTTGGATTTTaGGTTATACCTGGGTATAGG +
Preference number: 2 (lower is better)
Translates to: TLTWLGKKGETNFPSQVSYPFGF*VIPGYR
Trigger: CCTATACCCAGGTATAACTCAAAATCCAAAGGGATA...AGATACCTGACTAGGGAAGTTTGTCTCTCCTTTCTTGCCCAACCAGGTCAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR TCA 90 bp CAGTATAGTCTGTTAACTTCTGGTCAAGAGAGTAGGAAGGAAGGAGACACCCTGTATCCCTTTGGATTTTaGGTTATACCTGGGTATAGG +
Preference number: 2 (lower is better)
Translates to: QYSLLTSGQESRKEGDTLYPFGF*VIPGYR
Trigger: CCTATACCCAGGTATAACTCAAAATCCAAAGGGATA...CAGGGTGTCTCCTTCCTTCCTACTCTCTTGACCAGAAGTTAACAGACTATACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR TCA 90 bp CCACAGATACAGCGAATAACATCGTCGTCCTTCTCATGCCCATTCTCCTTTTCACAGTTACAAGTGCTTTaGGCTGTCAACTCACATTTT +
Preference number: 2 (lower is better)
Translates to: PQIQRITSSSFSCPFSFSQLQVL*AVNSHF
Trigger: AAAATGTGAGTTGACAGCTCAAAGCACTTGTAACTG...TGAAAAGGAGAATGGGCATGAGAAGGACGACGATGTTATTCGCTGTATCTGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR TCA 90 bp CAGTATAGTCTGTTAACTTCTGGTCAAGAGAGTAGGAAGGAAGGAGACACCCTGCAGTTACAAGTGCTTTaGGCTGTCAACTCACATTTT +
Preference number: 2 (lower is better)
Translates to: QYSLLTSGQESRKEGDTLQLQVL*AVNSHF
Trigger: AAAATGTGAGTTGACAGCTCAAAGCACTTGTAACTG...CAGGGTGTCTCCTTCCTTCCTACTCTCTTGACCAGAAGTTAACAGACTATACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR TCA 90 bp AACATCTCTCCCAACTGGGGATTTACGCCCATAGTACTTCTCAGCATTCCGAAACAGTTACAAGTGCTTTaGGCTGTCAACTCACATTTT +
Preference number: 2 (lower is better)
Translates to: NISPNWGFTPIVLLSIPKQLQVL*AVNSHF
Trigger: AAAATGTGAGTTGACAGCTCAAAGCACTTGTAACTG...TTTCGGAATGCTGAGAAGTACTATGGGCGTAAATCCCCAGTTGGGAGAGATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR TCA 90 bp ACGAGTCAGAGCATCGTCACCATAAGGGGAAATGTACAATTAGGACAGCATTGGCAGTTACAAGTGCTTTaGGCTGTCAACTCACATTTT +
Preference number: 2 (lower is better)
Translates to: TSQSIVTIRGNVQLGQHWQLQVL*AVNSHF
Trigger: AAAATGTGAGTTGACAGCTCAAAGCACTTGTAACTG...CCAATGCTGTCCTAATTGTACATTTCCCCTTATGGTGACGATGCTCTGACTCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR TCA 90 bp GCTCCAAGGCTTATTAAGTACCTAATGTCAACAACATGGCCCCATTCCCCTTGCATAGGTGAATACTGCTaGACAGTTTATGTAGTGACT +
Preference number: 2 (lower is better)
Translates to: APRLIKYLMSTTWPHSPCIGEYC*TVYVVT
Trigger: AGTCACTACATAAACTGTTCAGCAGTATTCACCTAT...GCAAGGGGAATGGGGCCATGTTGTTGACATTAGGTACTTAATAAGCCTTGGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR TCA 90 bp TATATTAGCAGCATTTATATTTTCCGCAATCACACAGCCTACAGACATGCAGACCTCGGAGCAAACAGATaGAGTAGACACAGCCAGGTT +
Preference number: 2 (lower is better)
Translates to: YISSIYIFRNHTAYRHADLGANR*SRHSQV
Trigger: AACCTGGCTGTGTCTACTTCATCTGTTTGCTCCGAG...GTCTGCATGTCTGTAGGCTGTGTGATTGCGGAAAATATAAATGCTGCTAATATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR TCA 90 bp TCCTTTAAATCAGGATCCCGGCTACCAAGAAGAGTAGATGGCGTTGCATTAATAGTGAATGAAGACGGATaGCTTCTTCAGACTGGCATT +
Preference number: 2 (lower is better)
Translates to: SFKSGSRLPRRVDGVALIVNEDG*LLQTGI
Trigger: AATGCCAGTCTGAAGAAGTCATCCGTCTTCATTCAC...TATTAATGCAACGCCATCTACTCTTCTTGGTAGCCGGGATCCTGATTTAAAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR-3UTR TCA 90 bp GCCGATTTAGTGAAGTGTCCTGTGCAGAAAAGAGTCCAGGGCTGTCAGTTAATTAACCAATCCCATTGCTaGACTTGCTACAATCTTCTT +
Preference number: 2 (lower is better)
Translates to: ADLVKCPVQKRVQGCQLINQSHC*TCYNLL
Trigger: AAGAAGATTGTAGCAAGTTCAGCAATGGGATTGGTT...AATTAACTGACAGCCCTGGACTCTTTTCTGCACAGGACACTTCACTAAATCGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR-3UTR TCA 90 bp CAGTTGAGGCATCTCCTTAGATTTAGGCCTTCCTCTTTTGGGCTTATAAATATCATTAGGAGCCAACTGTaGAGAAGTTTCAGGGGGACT +
Preference number: 2 (lower is better)
Translates to: QLRHLLRFRPSSFGLINIIRSQL*RSFRGT
Trigger: AGTCCCCCTGAAACTTCTTCACAGTTGGCTCCTAAT...GATATTTATAAGCCCAAAAGAGGAAGGCCTAAATCTAAGGAGATGCCTCAACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR-3UTR TCA 90 bp TCCTCGCTCTCAAAGAAATCACTGCTACTTCTATGGTTGTCACTTTCAGATTCTCTTCATCTTGACTGGTaGCCTCATTTGCCTCTTAGG +
Preference number: 2 (lower is better)
Translates to: SSLSKKSLLLLWLSLSDSLHLDW*PHLPLR
Trigger: CCTAAGAGGCAAATGAGGTCACCAGTCAAGATGAAG...AGAATCTGAAAGTGACAACCATAGAAGTAGCAGTGATTTCTTTGAGAGCGAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR-3UTR TCA 90 bp TTGGAGAACTTTCTGAACAGTCAATCTGTAAAGGTGTCTGCAATCCCAAGGCCAGGTATTTGGCAGGATTaGGAAGTAAATGACCAGCAT +
Preference number: 2 (lower is better)
Translates to: LENFLNSQSVKVSAIPRPGIWQD*EVNDQH
Trigger: ATGCTGGTCATTTACTTCTCAATCCTGCCAAATACC...TGGCCTTGGGATTGCAGACACCTTTACAGATTGACTGTTCAGAAAGTTCTCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR-3UTR TCA 90 bp GCTCCAAGGCTTATTAAGTACCTAATGTCAACAACATGGCCCCATTCCCCTTGCTTCAGATTTACACTCTaGACAACAGCCTCAATTACA +
Preference number: 2 (lower is better)
Translates to: APRLIKYLMSTTWPHSPCFRFTL*TTASIT
Trigger: TGTAATTGAGGCTGTTGTTCAGAGTGTAAATCTGAA...GCAAGGGGAATGGGGCCATGTTGTTGACATTAGGTACTTAATAAGCCTTGGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR GCA 90 bp GATAAAGAGTGGGAGGATACCTTCCATAGTAACCTAATCCTATGGGAGCAGCTGGACCAATCCTACTGCTaGATTAAACACTGGCTTTTT +
Preference number: 2 (lower is better)
Translates to: DKEWEDTFHSNLILWEQLDQSYC*IKHWLF
Trigger: AAAAAGCCAGTGTTTAATGCAGCAGTAGGATTGGTC...CAGCTGCTCCCATAGGATTAGGTTACTATGGAAGGTATCCTCCCACTCTTTATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR-3UTR GCA 90 bp TTGGAGAACTTTCTGAACAGTCAATCTGTAAAGGTGTCTGCAATCCCAAGGCCAGAGTCTGAATCATACTaGCCTGTCTGGAGTGTAAAT +
Preference number: 2 (lower is better)
Translates to: LENFLNSQSVKVSAIPRPESESY*PVWSVN
Trigger: ATTTACACTCCAGACAGGGCAGTATGATTCAGACTC...TGGCCTTGGGATTGCAGACACCTTTACAGATTGACTGTTCAGAAAGTTCTCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR-3UTR GCA 90 bp CCCATAGTACTTCTCAGCATTCCGAAAGACTTTGAGCATGTCAGCATCAAAAGCAATCGTTCTAGACATTaGACCCATTCATGCCTCTGT +
Preference number: 2 (lower is better)
Translates to: PIVLLSIPKDFEHVSIKSNRSRH*THSCLC
Trigger: ACAGAGGCATGAATGGGTGCAATGTCTAGAACGATT...GCTTTTGATGCTGACATGCTCAAAGTCTTTCGGAATGCTGAGAAGTACTATGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR GCA 90 bp TCCCTCCTCTCTACATTATTAACCCTTAAGGTGAAGCAATGGAGAAGAAAATTAGCTGTCTGCCTCACTTaGTGTCTCTCCCACAATCTC +
Preference number: 2 (lower is better)
Translates to: SLLSTLLTLKVKQWRRKLAVCLT*CLSHNL
Trigger: GAGATTGTGGGAGAGACAGCAAGTGAGGCAGACAGC...TAATTTTCTTCTCCATTGCTTCACCTTAAGGGTTAATAATGTAGAGAGGAGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CCA 90 bp TCCACATGTGAGTATCTTATACCCAGGTCTCTTAGTAATGTACAGTGCTTCTCTTTCTGGTCATCAATGTaGTCCTCCCTCCTCTCTACA +
Preference number: 2 (lower is better)
Translates to: STCEYLIPRSLSNVQCFSFWSSM*SSLLST
Trigger: TGTAGAGAGGAGGGAGGACCACATTGATGACCAGAA...AGAGAAGCACTGTACATTACTAAGAGACCTGGGTATAAGATACTCACATGTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR CCA 90 bp AAGAGACAGTATAGTCTGTTAACTTCTGGTCAAGAGAGTAGGAAGGAAGGAGACGAAAAACCTAAGCTGTaGGGTGGGGCAAATGCTATA +
Preference number: 2 (lower is better)
Translates to: KRQYSLLTSGQESRKEGDEKPKL*GGANAI
Trigger: TATAGCATTTGCCCCACCCCACAGCTTAGGTTTTTC...GTCTCCTTCCTTCCTACTCTCTTGACCAGAAGTTAACAGACTATACTGTCTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR CCA 90 bp AAGAGACAGTATAGTCTGTTAACTTCTGGTCAAGAGAGTAGGAAGGAAGGAGACCTGGCCCTATCCCTTTaGATTTTGAGTTATACCTGG +
Preference number: 2 (lower is better)
Translates to: KRQYSLLTSGQESRKEGDLALSL*ILSYTW
Trigger: CCAGGTATAACTCAAAATCCAAAGGGATAGGGCCAG...GTCTCCTTCCTTCCTACTCTCTTGACCAGAAGTTAACAGACTATACTGTCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR CCA 90 bp GGGGAAGGAGTAGCTTCTTTTAGAGATGTGAGTTCACTCAAGTGCGAAGGAGAACAAAAGTTTTGCTGGTaGCACTATCTTTCAGGGATT +
Preference number: 2 (lower is better)
Translates to: GEGVASFRDVSSLKCEGEQKFCW*HYLSGI
Trigger: AATCCCTGAAAGATAGTGCCACCAGCAAAACTTTTG...TTCTCCTTCGCACTTGAGTGAACTCACATCTCTAAAAGAAGCTACTCCTTCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR-3UTR CCA 90 bp TTGGAGAACTTTCTGAACAGTCAATCTGTAAAGGTGTCTGCAATCCCAAGGCCAGGATTTGCTCAACTTTaGCAATCGGCGTTTAAGGAA +
Preference number: 2 (lower is better)
Translates to: LENFLNSQSVKVSAIPRPGFAQL*QSAFKE
Trigger: TTCCTTAAACGCCGATTGCCAAAGTTGAGCAAATCC...TGGCCTTGGGATTGCAGACACCTTTACAGATTGACTGTTCAGAAAGTTCTCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR-3UTR CCA 90 bp GGGAACAGCTGCTTGTCAACTTTTCAGATAGGAGTGAGATGCTATTATTGCAAGTTCTCCATGGGCTCTTaGTCCTCATTTTGTACCATC +
Preference number: 2 (lower is better)
Translates to: GNSCLSTFQIGVRCYYCKFSMGS*SSFCTI
Trigger: GATGGTACAAAATGAGGACCAAGAGCCCATGGAGAA...CTTGCAATAATAGCATCTCACTCCTATCTGAAAAGTTGACAAGCAGCTGTTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CCA 90 bp CAGTATAGTCTGTTAACTTCTGGTCAAGAGAGTAGGAAGGAAGGAGACACCCTGCAATACTTTTCTCCATaGGCTCTTGGTCCTCATTTT +
Preference number: 2 (lower is better)
Translates to: QYSLLTSGQESRKEGDTLQYFSP*ALGPHF
Trigger: AAAATGAGGACCAAGAGCCCATGGAGAAAAGTATTG...CAGGGTGTCTCCTTCCTTCCTACTCTCTTGACCAGAAGTTAACAGACTATACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CCA 90 bp CAGTATAGTCTGTTAACTTCTGGTCAAGAGAGTAGGAAGGAAGGAGACACCCTGACTTTCCAACATGAATaGGCGCTGGAAATAATCCAT +
Preference number: 2 (lower is better)
Translates to: QYSLLTSGQESRKEGDTLTFQHE*ALEIIH
Trigger: ATGGATTATTTCCAGCGCCCATTCATGTTGGAAAGT...CAGGGTGTCTCCTTCCTTCCTACTCTCTTGACCAGAAGTTAACAGACTATACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CCA 90 bp TATATTAGCAGCATTTATATTTTCCGCAATCACACAGCCTACAGACATGCAGACTGCAGGGCAGAGAACTaGGTCATGAAGACATCAGAC +
Preference number: 2 (lower is better)
Translates to: YISSIYIFRNHTAYRHADCRAEN*VMKTSD
Trigger: GTCTGATGTCTTCATGACCCAGTTCTCTGCCCTGCA...GTCTGCATGTCTGTAGGCTGTGTGATTGCGGAAAATATAAATGCTGCTAATATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR CAA 90 bp AAGAAATCACTGCTACTTCTATGGTTGTCACTTTCAGATTCTAGCTaGCTTGGACTTTCAGTGGCAACAAATGGAGCCACTGACAGTACA +
Preference number: 2 (lower is better)
Translates to: KKSLLLLWLSLSDSS*LGLSVATNGATDST
Trigger: TGTACTGTCAGTGGCTCCATTTGTTGCCACTGAAAGTCCAAGCAAGCTAGAATCTGAAAGTGACAACCATAGAAGTAGCAGTGATTTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR-3UTR TCA 90 bp AACAAAAGAAACCACTCAAACGGGCTTGGACATGCGATTTTTCCAGCTCCACATTATCCCTTTGGATTTTaGGTTATACCTGGGTATAGG +
Preference number: 2 (lower is better)
Translates to: NKRNHSNGLGHAIFPAPHYPFGF*VIPGYR
Trigger: CCTATACCCAGGTATAACTCAAAATCCAAAGGGATA...ATGTGGAGCTGGAAAAATCGCATGTCCAAGCCCGTTTGAGTGGTTTCTTTTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR TCA 90 bp TATATTAGCAGCATTTATATTTTCCGCAATCACACAGCCTACAGACATGCAGACTTCCAGCTCCACATGTaGGTATCTTATACCCAGGTC +
Preference number: 2 (lower is better)
Translates to: YISSIYIFRNHTAYRHADFQLHM*VSYTQV
Trigger: GACCTGGGTATAAGATACTCACATGTGGAGCTGGAA...GTCTGCATGTCTGTAGGCTGTGTGATTGCGGAAAATATAAATGCTGCTAATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR TCA 90 bp TATATTAGCAGCATTTATATTTTCCGCAATCACACAGCCTACAGACATGCAGACTGTATCTATTTGCAGTaGTGTAGTGCTTTGCCCCGC +
Preference number: 2 (lower is better)
Translates to: YISSIYIFRNHTAYRHADCIYLQ*CSALPR
Trigger: GCGGGGCAAAGCACTACATCACTGCAAATAGATACA...GTCTGCATGTCTGTAGGCTGTGTGATTGCGGAAAATATAAATGCTGCTAATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR TCA 90 bp AATGGGGATTTAGCGGTAGATACATCAGAAGCACCTCCCATTTTAAAGTCCGGAGAGAAACTGTCTTGCTaGATGCATGTTCCTTCATTA +
Preference number: 2 (lower is better)
Translates to: NGDLAVDTSEAPPILKSGEKLSC*MHVPSL
Trigger: TAATGAAGGAACATGCATTCAGCAAGACAGTTTCTC...TCCGGACTTTAAAATGGGAGGTGCTTCTGATGTATCTACCGCTAAATCCCCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR-3UTR GCA 90 bp TATATTAGCAGCATTTATATTTTCCGCAATCACACAGCCTACAGACATGCAGACGTGGGGTGGGGCAAATaGTATAAAGTACCAGTAGGT +
Preference number: 2 (lower is better)
Translates to: YISSIYIFRNHTAYRHADVGWGK*YKVPVG
Trigger: ACCTACTGGTACTTTATAGCATTTGCCCCACCCCAC...GTCTGCATGTCTGTAGGCTGTGTGATTGCGGAAAATATAAATGCTGCTAATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR GCA 90 bp TGTATTGCTTACCAATCACACAGCAGGTGTGTGTGTGTGTGTGTATATATATACGGCAGCAGTTACAAGTaGTTTGAGCTGTCAACTCAC +
Preference number: 2 (lower is better)
Translates to: CIAYQSHSRCVCVCVYIYGSSYK*FELSTH
Trigger: GTGAGTTGACAGCTCAAAGCACTTGTAACTGCTGCC...GTATATATATACACACACACACACACACCTGCTGTGTGATTGGTAAGCAATACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR GCA 90 bp ATGAAAGTTATAATCATAAGTGAGTTCAGTCCCAGCTGGCATGTCTTTAAGAGCGGCAGCAGTTACAAGTaGTTTGAGCTGTCAACTCAC +
Preference number: 2 (lower is better)
Translates to: MKVIIISEFSPSWHVFKSGSSYK*FELSTH
Trigger: GTGAGTTGACAGCTCAAAGCACTTGTAACTGCTGCC...GCTCTTAAAGACATGCCAGCTGGGACTGAACTCACTTATGATTATAACTTTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR GCA 90 bp TATATTAGCAGCATTTATATTTTCCGCAATCACACAGCCTACAGACATGCAGACGGCAGCAGTTACAAGTaGTTTGAGCTGTCAACTCAC +
Preference number: 2 (lower is better)
Translates to: YISSIYIFRNHTAYRHADGSSYK*FELSTH
Trigger: GTGAGTTGACAGCTCAAAGCACTTGTAACTGCTGCC...GTCTGCATGTCTGTAGGCTGTGTGATTGCGGAAAATATAAATGCTGCTAATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR CCA 90 bp TATATTAGCAGCATTTATATTTTCCGCAATCACACAGCCTACAGACATGCAGACAGTACCAGTAGGTTCTaGTCATCAATGTGGTCCTCC +
Preference number: 2 (lower is better)
Translates to: YISSIYIFRNHTAYRHADSTSRF*SSMWSS
Trigger: GGAGGACCACATTGATGACCAGAACCTACTGGTACT...GTCTGCATGTCTGTAGGCTGTGTGATTGCGGAAAATATAAATGCTGCTAATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR CCA 90 bp TGGGTCTGTAGTTTTGTAAACGTCAGAATACAGCCCTGCTTTCTGATACTTCTTGAAAAACCTAAGCTGTaGGGTGGGGCAAATGCTATA +
Preference number: 2 (lower is better)
Translates to: WVCSFVNVRIQPCFLILLEKPKL*GGANAI
Trigger: TATAGCATTTGCCCCACCCCACAGCTTAGGTTTTTC...AAGAAGTATCAGAAAGCAGGGCTGTATTCTGACGTTTACAAAACTACAGACCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CCA 90 bp TATATTAGCAGCATTTATATTTTCCGCAATCACACAGCCTACAGACATGCAGACTCTTCGCAATGCCTGTaGGATCTGAGGATGACAGAA +
Preference number: 2 (lower is better)
Translates to: YISSIYIFRNHTAYRHADSSQCL*DLRMTE
Trigger: TTCTGTCATCCTCAGATCCCACAGGCATTGCGAAGA...GTCTGCATGTCTGTAGGCTGTGTGATTGCGGAAAATATAAATGCTGCTAATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR CCA 90 bp TGTATTGCTTACCAATCACACAGCAGGTGTGTGTGTGTGTGTGTATATATATACCTCTGGGGTAGCTCTTaGAGCCAACAGAGAATAGAT +
Preference number: 2 (lower is better)
Translates to: CIAYQSHSRCVCVCVYIYLWGSS*SQQRID
Trigger: ATCTATTCTCTGTTGGCTCCAAGAGCTACCCCAGAG...GTATATATATACACACACACACACACACCTGCTGTGTGATTGGTAAGCAATACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR CCA 90 bp TCCCTCCTCTCTACATTATTAACCCTTAAGGTGAAGCAATGGAGAAGAAAATTACCCATGATTCCATTTTaGGGAGTAGAGGTAGGGAGG +
Preference number: 2 (lower is better)
Translates to: SLLSTLLTLKVKQWRRKLPMIPF*GVEVGR
Trigger: CCTCCCTACCTCTACTCCCCAAAATGGAATCATGGG...TAATTTTCTTCTCCATTGCTTCACCTTAAGGGTTAATAATGTAGAGAGGAGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR CCA 90 bp TGTATTGCTTACCAATCACACAGCAGGTGTGTGTGTGTGTGTGTATATATATACAGGAAGGAGACACCCTaGATATACCTCCTGATGTCA +
Preference number: 2 (lower is better)
Translates to: CIAYQSHSRCVCVCVYIYRKETP*IYLLMS
Trigger: TGACATCAGGAGGTATATCCAGGGTGTCTCCTTCCT...GTATATATATACACACACACACACACACCTGCTGTGTGATTGGTAAGCAATACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR CCA 90 bp TCCCTCCTCTCTACATTATTAACCCTTAAGGTGAAGCAATGGAGAAGAAAATTACCACTCAAACGGGCTTaGACATGCGATTTTTCCAGC +
Preference number: 2 (lower is better)
Translates to: SLLSTLLTLKVKQWRRKLPLKRA*TCDFSS
Trigger: GCTGGAAAAATCGCATGTCCAAGCCCGTTTGAGTGG...TAATTTTCTTCTCCATTGCTTCACCTTAAGGGTTAATAATGTAGAGAGGAGGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR CCA 90 bp TGGGTCTGTAGTTTTGTAAACGTCAGAATACAGCCCTGCTTTCTGATACTTCTTGTCTCTGTTCAATTCTaGGTTGACAAACTGAGCAGC +
Preference number: 2 (lower is better)
Translates to: WVCSFVNVRIQPCFLILLVSVQF*VDKLSS
Trigger: GCTGCTCAGTTTGTCAACCCAGAATTGAACAGAGAC...AAGAAGTATCAGAAAGCAGGGCTGTATTCTGACGTTTACAAAACTACAGACCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CCA 90 bp ACGAGTCAGAGCATCGTCACCATAAGGGGAAATGTACAATTAGGACAGCATTGGGATCAATCGACTCTTTaGGTCTGTAGTTTTGTAAAC +
Preference number: 2 (lower is better)
Translates to: TSQSIVTIRGNVQLGQHWDQSTL*VCSFVN
Trigger: GTTTACAAAACTACAGACCCAAAGAGTCGATTGATC...CCAATGCTGTCCTAATTGTACATTTCCCCTTATGGTGACGATGCTCTGACTCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR TCA 90 bp AAGAGACAGTATAGTCTGTTAACTTCTGGTCAAGAGAGTAGGAAGGAAGGAGACCAGTTACAAGTGCTTTaGGCTGTCAACTCACATTTT +
Preference number: 2 (lower is better)
Translates to: KRQYSLLTSGQESRKEGDQLQVL*AVNSHF
Trigger: AAAATGTGAGTTGACAGCTCAAAGCACTTGTAACTG...GTCTCCTTCCTTCCTACTCTCTTGACCAGAAGTTAACAGACTATACTGTCTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR TCA 90 bp AACAAAAGAAACCACTCAAACGGGCTTGGACATGCGATTTTTCCAGCTCCACATATAGGTGAATACTGCTaGACAGTTTATGTAGTGACT +
Preference number: 2 (lower is better)
Translates to: NKRNHSNGLGHAIFPAPHIGEYC*TVYVVT
Trigger: AGTCACTACATAAACTGTTCAGCAGTATTCACCTAT...ATGTGGAGCTGGAAAAATCGCATGTCCAAGCCCGTTTGAGTGGTTTCTTTTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR TCA 90 bp CCCATAGTACTTCTCAGCATTCCGAAAGACTTTGAGCATGTCAGCATCAAAAGCATAGGTGAATACTGCTaGACAGTTTATGTAGTGACT +
Preference number: 2 (lower is better)
Translates to: PIVLLSIPKDFEHVSIKSIGEYC*TVYVVT
Trigger: AGTCACTACATAAACTGTTCAGCAGTATTCACCTAT...GCTTTTGATGCTGACATGCTCAAAGTCTTTCGGAATGCTGAGAAGTACTATGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR TCA 90 bp GCTTCTTTTAGAGATGTGAGTTCACTCAAGTGCGAAGGAGAATTTGGCAACAAACGTTTAAGGAAGTCATaGTCTACAAATGAAGGGGGT +
Preference number: 2 (lower is better)
Translates to: ASFRDVSSLKCEGEFGNKRLRKS*STNEGG
Trigger: ACCCCCTTCATTTGTAGATCATGACTTCCTTAAACG...TTTGTTGCCAAATTCTCCTTCGCACTTGAGTGAACTCACATCTCTAAAAGAAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR-3UTR GCA 90 bp TCCACATGTGAGTATCTTATACCCAGGTCTCTTAGTAATGTACAGTGCTTCTCTTGTAGTGACTTTTGTTaGAGGGGTGGGTTTAGAGTT +
Preference number: 2 (lower is better)
Translates to: STCEYLIPRSLSNVQCFSCSDFC*RGGFRV
Trigger: AACTCTAAACCCACCCCTGCAACAAAAGTCACTACA...AGAGAAGCACTGTACATTACTAAGAGACCTGGGTATAAGATACTCACATGTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR GCA 90 bp AAGAGACAGTATAGTCTGTTAACTTCTGGTCAAGAGAGTAGGAAGGAAGGAGACGTCAGAATACAGCCCTaGTTTCTGATACTTCTTCTT +
Preference number: 2 (lower is better)
Translates to: KRQYSLLTSGQESRKEGDVRIQP*FLILLL
Trigger: AAGAAGAAGTATCAGAAAGCAGGGCTGTATTCTGAC...GTCTCCTTCCTTCCTACTCTCTTGACCAGAAGTTAACAGACTATACTGTCTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CCA 90 bp TCCCTCCTCTCTACATTATTAACCCTTAAGGTGAAGCAATGGAGAAGAAAATTATCTTCGCAATGCCTGTaGGATCTGAGGATGACAGAA +
Preference number: 2 (lower is better)
Translates to: SLLSTLLTLKVKQWRRKLSSQCL*DLRMTE
Trigger: TTCTGTCATCCTCAGATCCCACAGGCATTGCGAAGA...TAATTTTCTTCTCCATTGCTTCACCTTAAGGGTTAATAATGTAGAGAGGAGGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR CCA 90 bp TGTATTGCTTACCAATCACACAGCAGGTGTGTGTGTGTGTGTGTATATATATACCTGGCCCTATCCCTTTaGATTTTGAGTTATACCTGG +
Preference number: 2 (lower is better)
Translates to: CIAYQSHSRCVCVCVYIYLALSL*ILSYTW
Trigger: CCAGGTATAACTCAAAATCCAAAGGGATAGGGCCAG...GTATATATATACACACACACACACACACCTGCTGTGTGATTGGTAAGCAATACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR CCA 90 bp CTGGGTCATGAAGACATCAGACTTGATATTCCCATCATCTCGGCAGATCCCATTCTAGGTTTTTCTTTGTaGCCAAGATTTTGTCGTAAT +
Preference number: 2 (lower is better)
Translates to: LGHEDIRLDIPIISADPILGFSL*PRFCRN
Trigger: ATTACGACAAAATCTTGGCCACAAAGAAAAACCTAG...AATGGGATCTGCCGAGATGATGGGAATATCAAGTCTGATGTCTTCATGACCCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CCA 90 bp CAGTATAGTCTGTTAACTTCTGGTCAAGAGAGTAGGAAGGAAGGAGACACCCTGCTAGGTTTTTCTTTGTaGCCAAGATTTTGTCGTAAT +
Preference number: 2 (lower is better)
Translates to: QYSLLTSGQESRKEGDTLLGFSL*PRFCRN
Trigger: ATTACGACAAAATCTTGGCCACAAAGAAAAACCTAG...CAGGGTGTCTCCTTCCTTCCTACTCTCTTGACCAGAAGTTAACAGACTATACTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CCA 90 bp TATATTAGCAGCATTTATATTTTCCGCAATCACACAGCCTACAGACATGCAGACCCTGGTGTCATCATCTaGCTTCTTACAGTTACAGGT +
Preference number: 2 (lower is better)
Translates to: YISSIYIFRNHTAYRHADPGVII*LLTVTG
Trigger: ACCTGTAACTGTAAGAAGCCAGATGATGACACCAGG...GTCTGCATGTCTGTAGGCTGTGTGATTGCGGAAAATATAAATGCTGCTAATATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR CAA 90 bp AAATCTTTATTAACCAGTCCAACCACAGTGCCAAGTCCTAACTTCTaGCCAGACTCTTTATGCACTAAACCTGGAACAATACCAATTCCT +
Preference number: 2 (lower is better)
Translates to: KSLLTSPTTVPSPNF*PDSLCTKPGTIPIP
Trigger: AGGAATTGGTATTGTTCCAGGTTTAGTGCATAAAGAGTCTGGCAAGAAGTTAGGACTTGGCACTGTGGTTGGACTGGTTAATAAAGATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR-3UTR TCA 90 bp CAGTTGAGGCATCTCCTTAGATTTAGGCCTTCCTCTTTTGGGCTTATAAATATCTATACTATGACCAACTaGCCTATGACCAACGTTCAA +
Preference number: 2 (lower is better)
Translates to: QLRHLLRFRPSSFGLINIYTMTN*PMTNVQ
Trigger: TTGAACGTTGGTCATAGGTCAGTTGGTCATAGTATA...GATATTTATAAGCCCAAAAGAGGAAGGCCTAAATCTAAGGAGATGCCTCAACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR-3UTR TCA 90 bp TCCCTCCTCTCTACATTATTAACCCTTAAGGTGAAGCAATGGAGAAGAAAATTAGTAAAACAGGTGTGCTaGCTTGTCAAGCCGATAATC +
Preference number: 2 (lower is better)
Translates to: SLLSTLLTLKVKQWRRKLVKQVC*LVKPII
Trigger: GATTATCGGCTTGACAAGTCAGCACACCTGTTTTAC...TAATTTTCTTCTCCATTGCTTCACCTTAAGGGTTAATAATGTAGAGAGGAGGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR GCA 90 bp TATATTAGCAGCATTTATATTTTCCGCAATCACACAGCCTACAGACATGCAGACTGTAGTGACTTTTGTTaGAGGGGTGGGTTTAGAGTT +
Preference number: 2 (lower is better)
Translates to: YISSIYIFRNHTAYRHADCSDFC*RGGFRV
Trigger: AACTCTAAACCCACCCCTGCAACAAAAGTCACTACA...GTCTGCATGTCTGTAGGCTGTGTGATTGCGGAAAATATAAATGCTGCTAATATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR GCA 90 bp AATGGGGATTTAGCGGTAGATACATCAGAAGCACCTCCCATTTTAAAGTCCGGAAAGAGTAGATGGCGTTaGATTAATATAATCTGCCAT +
Preference number: 2 (lower is better)
Translates to: NGDLAVDTSEAPPILKSGKSRWR*INIICH
Trigger: ATGGCAGATTATATTAATGCAACGCCATCTACTCTT...TCCGGACTTTAAAATGGGAGGTGCTTCTGATGTATCTACCGCTAAATCCCCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR-3UTR GCA 90 bp GCTTCTTTTAGAGATGTGAGTTCACTCAAGTGCGAAGGAGAATTTGGCAACAAATGTCTGGAGTGTAAATaGAAATATGGCACTGAACTG +
Preference number: 2 (lower is better)
Translates to: ASFRDVSSLKCEGEFGNKCLECK*KYGTEL
Trigger: CAGTTCAGTGCCATATTTGCATTTACACTCCAGACA...TTTGTTGCCAAATTCTCCTTCGCACTTGAGTGAACTCACATCTCTAAAAGAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR-3UTR GCA 90 bp ATGAAAGTTATAATCATAAGTGAGTTCAGTCCCAGCTGGCATGTCTTTAAGAGCTATTCAATGATGAACTaGCCAGCTTTTAGGGGCTCT +
Preference number: 2 (lower is better)
Translates to: MKVIIISEFSPSWHVFKSYSMMN*PAFRGS
Trigger: AGAGCCCCTAAAAGCTGGGCAGTTCATCATTGAATA...GCTCTTAAAGACATGCCAGCTGGGACTGAACTCACTTATGATTATAACTTTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR GCA 90 bp CAGATGTACACATCTTGCTCCTTTACTCCTTTGGGTCTCCCTTTACAATACGTACCACACTTACAAAGTTaGTGTTTTTCCACATTGAAG +
Preference number: 2 (lower is better)
Translates to: QMYTSCSFTPLGLPLQYVPHLQS*CFSTLK
Trigger: CTTCAATGTGGAAAAACAGCAACTTTGTAAGTGTGG...TACGTATTGTAAAGGGAGACCCAAAGGAGTAAAGGAGCAAGATGTGTACATCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CCA 90 bp TCCCTCCTCTCTACATTATTAACCCTTAAGGTGAAGCAATGGAGAAGAAAATTAGAAAAACCTAAGCTGTaGGGTGGGGCAAATGCTATA +
Preference number: 2 (lower is better)
Translates to: SLLSTLLTLKVKQWRRKLEKPKL*GGANAI
Trigger: TATAGCATTTGCCCCACCCCACAGCTTAGGTTTTTC...TAATTTTCTTCTCCATTGCTTCACCTTAAGGGTTAATAATGTAGAGAGGAGGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR CCA 90 bp TCCCTCCTCTCTACATTATTAACCCTTAAGGTGAAGCAATGGAGAAGAAAATTACTGGCCCTATCCCTTTaGATTTTGAGTTATACCTGG +
Preference number: 2 (lower is better)
Translates to: SLLSTLLTLKVKQWRRKLLALSL*ILSYTW
Trigger: CCAGGTATAACTCAAAATCCAAAGGGATAGGGCCAG...TAATTTTCTTCTCCATTGCTTCACCTTAAGGGTTAATAATGTAGAGAGGAGGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR CCA 90 bp TTGGAGAACTTTCTGAACAGTCAATCTGTAAAGGTGTCTGCAATCCCAAGGCCAACCAAGAAGAGTAGATaGCGTTGCATTAATATAATC +
Preference number: 2 (lower is better)
Translates to: LENFLNSQSVKVSAIPRPTKKSR*RCINII
Trigger: GATTATATTAATGCAACGCCATCTACTCTTCTTGGT...TGGCCTTGGGATTGCAGACACCTTTACAGATTGACTGTTCAGAAAGTTCTCCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR-3UTR CCA 90 bp TATATTAGCAGCATTTATATTTTCCGCAATCACACAGCCTACAGACATGCAGACGGGGGTCAATCTAGTTaGGGTGTTGATATTTTCACT +
Preference number: 2 (lower is better)
Translates to: YISSIYIFRNHTAYRHADGGQSS*GVDIFT
Trigger: AGTGAAAATATCAACACCCCAACTAGATTGACCCCC...GTCTGCATGTCTGTAGGCTGTGTGATTGCGGAAAATATAAATGCTGCTAATATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR TCA 90 bp TTTCATCTTGTCATAGCTGAGGTAATCATGATTCCTGCGCTTACATTTGTGTTTTTTTCTCCCTGTGAATaGAGACGGATGACTTCTTCA +
Preference number: 2 (lower is better)
Translates to: FHLVIAEVIMIPALTFVFFSPCE*RRMTSS
Trigger: TGAAGAAGTCATCCGTCTTCATTCACAGGGAGAAAA...AAACACAAATGTAAGCGCAGGAATCATGATTACCTCAGCTATGACAAGATGAAA
39% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR-3UTR TCA 90 bp TCCACATGTGAGTATCTTATACCCAGGTCTCTTAGTAATGTACAGTGCTTCTCTTTCAGATTTACACTCTaGACAACAGCCTCAATTACA +
Preference number: 2 (lower is better)
Translates to: STCEYLIPRSLSNVQCFSFRFTL*TTASIT
Trigger: TGTAATTGAGGCTGTTGTTCAGAGTGTAAATCTGAA...AGAGAAGCACTGTACATTACTAAGAGACCTGGGTATAAGATACTCACATGTGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR TCA 90 bp TCCCTCCTCTCTACATTATTAACCCTTAAGGTGAAGCAATGGAGAAGAAAATTACATTCCGAAAGACTTTaGGCATGTCAGCATCAAAAG +
Preference number: 2 (lower is better)
Translates to: SLLSTLLTLKVKQWRRKLHSERL*ACQHQK
Trigger: CTTTTGATGCTGACATGCTCAAAGTCTTTCGGAATG...TAATTTTCTTCTCCATTGCTTCACCTTAAGGGTTAATAATGTAGAGAGGAGGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CCA 90 bp CAGATGTACACATCTTGCTCCTTTACTCCTTTGGGTCTCCCTTTACAATACGTACTAGGTTTTTCTTTGTaGCCAAGATTTTGTCGTAAT +
Preference number: 2 (lower is better)
Translates to: QMYTSCSFTPLGLPLQYVLGFSL*PRFCRN
Trigger: ATTACGACAAAATCTTGGCCACAAAGAAAAACCTAG...TACGTATTGTAAAGGGAGACCCAAAGGAGTAAAGGAGCAAGATGTGTACATCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CCA 90 bp ATGAAAGTTATAATCATAAGTGAGTTCAGTCCCAGCTGGCATGTCTTTAAGAGCACTTTCCAACATGAATaGGCGCTGGAAATAATCCAT +
Preference number: 2 (lower is better)
Translates to: MKVIIISEFSPSWHVFKSTFQHE*ALEIIH
Trigger: ATGGATTATTTCCAGCGCCCATTCATGTTGGAAAGT...GCTCTTAAAGACATGCCAGCTGGGACTGAACTCACTTATGATTATAACTTTCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR CAA 90 bp TTAGAGCCAAATGTGGCAGCAAGACTTGATACCGTATTATGGAGTTaGGATTGCACTTTCCCTTTATTACTTGATTCTACAGAACTTGAA +
Preference number: 2 (lower is better)
Translates to: LEPNVAARLDTVLWS*DCTFPLLLDSTELE
Trigger: TTCAAGTTCTGTAGAATCAAGTAATAAAGGGAAAGTGCAATCCAAACTCCATAATACGGTATCAAGTCTTGCTGCCACATTTGGCTCTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR-3UTR TCA 90 bp TCCCTCCTCTCTACATTATTAACCCTTAAGGTGAAGCAATGGAGAAGAAAATTACAGTTACAAGTGCTTTaGGCTGTCAACTCACATTTT +
Preference number: 2 (lower is better)
Translates to: SLLSTLLTLKVKQWRRKLQLQVL*AVNSHF
Trigger: AAAATGTGAGTTGACAGCTCAAAGCACTTGTAACTG...TAATTTTCTTCTCCATTGCTTCACCTTAAGGGTTAATAATGTAGAGAGGAGGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR TCA 90 bp TATATTAGCAGCATTTATATTTTCCGCAATCACACAGCCTACAGACATGCAGACATAGGTGAATACTGCTaGACAGTTTATGTAGTGACT +
Preference number: 2 (lower is better)
Translates to: YISSIYIFRNHTAYRHADIGEYC*TVYVVT
Trigger: AGTCACTACATAAACTGTTCAGCAGTATTCACCTAT...GTCTGCATGTCTGTAGGCTGTGTGATTGCGGAAAATATAAATGCTGCTAATATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR CCA 90 bp TTTCATCTTGTCATAGCTGAGGTAATCATGATTCCTGCGCTTACATTTGTGTTTTCATACTGCCCTGTCTaGAGTGTAAATGCAAATATG +
Preference number: 2 (lower is better)
Translates to: FHLVIAEVIMIPALTFVFSYCPV*SVNANM
Trigger: CATATTTGCATTTACACTCCAGACAGGGCAGTATGA...AAACACAAATGTAAGCGCAGGAATCATGATTACCTCAGCTATGACAAGATGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR-3UTR GCA 90 bp CGTACTGAGAACTTTTCCAATATGCTTTCTTTATTCTGCCGTACAACATTCTTTCAAGTCCTAACTTCTTaGCAGACTCTTTATGCACTA +
Preference number: 2 (lower is better)
Translates to: RTENFSNMLSLFCRTTFFQVLTS*QTLYAL
Trigger: TAGTGCATAAAGAGTCTGGCAAGAAGTTAGGACTTG...AAAGAATGTTGTACGGCAGAATAAAGAAAGCATATTGGAAAAGTTCTCAGTACG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR-3UTR GCA 90 bp TTTCATCTTGTCATAGCTGAGGTAATCATGATTCCTGCGCTTACATTTGTGTTTTCTCAAAGAAATCACTaGTACTTCTATGGTTGTCAC +
Preference number: 2 (lower is better)
Translates to: FHLVIAEVIMIPALTFVFSQRNH*YFYGCH
Trigger: GTGACAACCATAGAAGTAGCAGTGATTTCTTTGAGA...AAACACAAATGTAAGCGCAGGAATCATGATTACCTCAGCTATGACAAGATGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR-3UTR CCA 90 bp TATATTAGCAGCATTTATATTTTCCGCAATCACACAGCCTACAGACATGCAGACTTCTCTTTCTTTAATTaGATCAATCGACTCTTTGGG +
Preference number: 2 (lower is better)
Translates to: YISSIYIFRNHTAYRHADFSFFN*INRLFG
Trigger: CCCAAAGAGTCGATTGATCCAATTAAAGAAAGAGAA...GTCTGCATGTCTGTAGGCTGTGTGATTGCGGAAAATATAAATGCTGCTAATATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CAA 90 bp CCGGGTGGCCATCAGGGGTGCGCCGACTATCCCTCATCAGATACACACAGTCACATGGCCCCATTCCCCTaGCCCAGATGGACCCTTCCC +
Preference number: 3 (lower is better)
Translates to: PGGHQGCADYPSSDTHSHMAPFP*PRWTLP
Trigger: GGGAAGGGTCCATCTGGGCAAGGGGAATGGGGCCAT...GTGACTGTGTGTATCTGATGAGGGATAGTCGGCGCACCCCTGATGGCCACCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR CCA 72 bp CACAGCCAGGTTGGGCATAGTGGGGCCGAGGGATCATaGGAACCTCCTGAGACTTCAGGTGCACGCCTCCAT +
Preference number: 3 (lower is better)
Translates to: HSQVGHSGAEGS*EPPETSGARLH
Trigger: ATGGAGGCGTGCACCTGAAGTCTCAGGAGGTTCCCATGATCCCTCGGCCCCACTATGCCCAACCTGGCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492987.2
3UTR-3UTR CAA 90 bp CTAATGTCAACAACATGGCCCCATTCCCCTTGCCCAGATGGACCCTTCCCACCCATGGCCCCATTCCCCTaGCCCAGATGGACCCTTCCC +
Preference number: 3 (lower is better)
Translates to: LMSTTWPHSPCPDGPFPPMAPFP*PRWTLP
Trigger: GGGAAGGGTCCATCTGGGCAAGGGGAATGGGGCCAT...GGGTGGGAAGGGTCCATCTGGGCAAGGGGAATGGGGCCATGTTGTTGACATTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR CAA 90 bp CTAATGTCAACAACATGGCCCCATTCCCCTTGCCCAGATGGACCCTTCCCACCCGTAGACACAGCCAGGTaGGGCATAGTGGGGCCGAGG +
Preference number: 3 (lower is better)
Translates to: LMSTTWPHSPCPDGPFPPVDTAR*GIVGPR
Trigger: CCTCGGCCCCACTATGCCCAACCTGGCTGTGTCTAC...GGGTGGGAAGGGTCCATCTGGGCAAGGGGAATGGGGCCATGTTGTTGACATTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CAA 90 bp GATAGGACTGACGGACCGGGTGGCCATCAGGGGTGCGCCGACTATCCCTCATCACAGCTGCCAACCGTCTaGTTCGAACAGATCGAGCTG +
Preference number: 3 (lower is better)
Translates to: DRTDGPGGHQGCADYPSSQLPTV*FEQIEL
Trigger: CAGCTCGATCTGTTCGAACAAGACGGTTGGCAGCTG...TGATGAGGGATAGTCGGCGCACCCCTGATGGCCACCCGGTCCGTCAGTCCTATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR GCA 72 bp GTCGATAGGACTGACGGACCGGGTGGCCATCAGGGGTaGGCCGACTATCCCTCATCAGATACACACAGTCAC +
Preference number: 3 (lower is better)
Translates to: VDRTDGPGGHQG*ADYPSSDTHSH
Trigger: GTGACTGTGTGTATCTGATGAGGGATAGTCGGCGCACCCCTGATGGCCACCCGGTCCGTCAGTCCTATCGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000492987.2
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR CCA 72 bp CGGGTAGGGCTACAATTTGTGCTCTCTGATGGCCGCTaGGAGGGTTTATCAGAGGTTGGCTGGGAGCCTGCC +
Preference number: 3 (lower is better)
Translates to: RVGLQFVLSDGR*EGLSEVGWEPA
Trigger: GGCAGGCTCCCAGCCAACCTCTGATAAACCCTCCCAGCGGCCATCAGAGAGCACAAATTGTAGCCCTACCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR CCA 72 bp AGGCTGTCTGGTTTTCCCAGGGTTCGGTCCTTGCTGTaGCTACGGCCTGGACTGGAAGAAGGTGGTGCAGAG +
Preference number: 3 (lower is better)
Translates to: RLSGFPRVRSLL*LRPGLEEGGAE
Trigger: CTCTGCACCACCTTCTTCCAGTCCAGGCCGTAGCCACAGCAAGGACCGAACCCTGGGAAAACCAGACAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR CCA 72 bp ACCCTCACTGACGTTAGCAGTGGCCCCTTCCCGTTCTaGCTCCTCCAGGCTGGGTATCTCATTGGCTGCTTG +
Preference number: 3 (lower is better)
Translates to: TLTDVSSGPFPF*LLQAGYLIGCL
Trigger: CAAGCAGCCAATGAGATACCCAGCCTGGAGGAGCCAGAACGGGAAGGGGCCACTGCTAACGTCAGTGAGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CAA 90 bp GAGCAAACAGATGAAGTAGACACAGCCAGGTTGGGCATAGTGGGGCCGAGGGATGTAGACACAGCCAGGTaGGGCATAGTGGGGCCGAGG +
Preference number: 3 (lower is better)
Translates to: EQTDEVDTARLGIVGPRDVDTAR*GIVGPR
Trigger: CCTCGGCCCCACTATGCCCAACCTGGCTGTGTCTAC...ATCCCTCGGCCCCACTATGCCCAACCTGGCTGTGTCTACTTCATCTGTTTGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000492987.2
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CAA 90 bp GTCGATAGGACTGACGGACCGGGTGGCCATCAGGGGTGCGCCGACTATCCCTCACTGGATCCCAGATGCTaGAGGTTCTCATTCTTTGAG +
Preference number: 3 (lower is better)
Translates to: VDRTDGPGGHQGCADYPSLDPRC*RFSFFE
Trigger: CTCAAAGAATGAGAACCTCAAGCATCTGGGATCCAG...TGAGGGATAGTCGGCGCACCCCTGATGGCCACCCGGTCCGTCAGTCCTATCGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CAA 90 bp AGAACCGACGGGATGGAGAGTGGTGTGTTTCGTGGGGACGGAAATAATGGTGACATGGCCCCATTCCCCTaGCCCAGATGGACCCTTCCC +
Preference number: 3 (lower is better)
Translates to: RTDGMESGVFRGDGNNGDMAPFP*PRWTLP
Trigger: GGGAAGGGTCCATCTGGGCAAGGGGAATGGGGCCAT...GTCACCATTATTTCCGTCCCCACGAAACACACCACTCTCCATCCCGTCGGTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CAA 90 bp TCAAGGGTAGAGCATCATCCTCCTGGCCCAAGTCTTTTAGGGGTGGCTTTGAGCGTAGACACAGCCAGGTaGGGCATAGTGGGGCCGAGG +
Preference number: 3 (lower is better)
Translates to: SRVEHHPPGPSLLGVALSVDTAR*GIVGPR
Trigger: CCTCGGCCCCACTATGCCCAACCTGGCTGTGTCTAC...GCTCAAAGCCACCCCTAAAAGACTTGGGCCAGGAGGATGATGCTCTACCCTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CAA 90 bp CCGGGTGGCCATCAGGGGTGCGCCGACTATCCCTCATCAGATACACACAGTCACTCTGATACTTCTTCTTaGGGGGACGTGGGGGCTTCT +
Preference number: 3 (lower is better)
Translates to: PGGHQGCADYPSSDTHSHSDTSS*GDVGAS
Trigger: AGAAGCCCCCACGTCCCCCAAAGAAGAAGTATCAGA...GTGACTGTGTGTATCTGATGAGGGATAGTCGGCGCACCCCTGATGGCCACCCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CAA 90 bp GTACCATCCGCTGCAGCAGACTATCCACAGAGTCATCCCCAGAAGCAACTAATCATGGCCCCATTCCCCTaGCCCAGATGGACCCTTCCC +
Preference number: 3 (lower is better)
Translates to: VPSAAADYPQSHPQKQLIMAPFP*PRWTLP
Trigger: GGGAAGGGTCCATCTGGGCAAGGGGAATGGGGCCAT...GATTAGTTGCTTCTGGGGATGACTCTGTGGATAGTCTGCTGCAGCGGATGGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000676814.1
ENST00000677042.1
3UTR GCA 72 bp CTAAAAGGCTGTCTGGTTTTCCCAGGGTTCGGTCCTTaGTGTGGCTACGGCCTGGACTGGAAGAAGGTGGTG +
Preference number: 3 (lower is better)
Translates to: LKGCLVFPGFGP*CGYGLDWKKVV
Trigger: CACCACCTTCTTCCAGTCCAGGCCGTAGCCACAGCAAGGACCGAACCCTGGGAAAACCAGACAGCCTTTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CAA 90 bp GATAGGACTGACGGACCGGGTGGCCATCAGGGGTGCGCCGACTATCCCTCATCATTTCTCCATGGGCTCTaGGTCCTCATTTTGTACCAT +
Preference number: 3 (lower is better)
Translates to: DRTDGPGGHQGCADYPSSFLHGL*VLILYH
Trigger: ATGGTACAAAATGAGGACCAAGAGCCCATGGAGAAA...TGATGAGGGATAGTCGGCGCACCCCTGATGGCCACCCGGTCCGTCAGTCCTATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CAA 90 bp AGCACAGCAGACACACAAGAACTACAGCGCATTAAAAACAGCATGTGTGCTGGCCCCAGGGTTCGGTCCTaGCTGTGGCTACGGCCTGGA +
Preference number: 3 (lower is better)
Translates to: STADTQELQRIKNSMCAGPRVRS*LWLRPG
Trigger: TCCAGGCCGTAGCCACAGCAAGGACCGAACCCTGGG...GCCAGCACACATGCTGTTTTTAATGCGCTGTAGTTCTTGTGTGTCTGCTGTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CAA 90 bp GAGCAAACAGATGAAGTAGACACAGCCAGGTTGGGCATAGTGGGGCCGAGGGATCCTCTGGTTACAGCATaGCTCGCCACATGGGCAAGT +
Preference number: 3 (lower is better)
Translates to: EQTDEVDTARLGIVGPRDPLVTA*LATWAS
Trigger: ACTTGCCCATGTGGCGAGCAATGCTGTAACCAGAGG...ATCCCTCGGCCCCACTATGCCCAACCTGGCTGTGTCTACTTCATCTGTTTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR TCA 72 bp CACCCCTGTCTATACCCAGAGAGCAGGAGGCAGGACTaGTTAGCTCCACTGGATCCCAGATGCTTGAGGTTC +
Preference number: 3 (lower is better)
Translates to: HPCLYPESRRQD*LAPLDPRCLRF
Trigger: GAACCTCAAGCATCTGGGATCCAGTGGAGCTAATCAGTCCTGCCTCCTGCTCTCTGGGTATAGACAGGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR CCA 72 bp CAACCATCCAACCATAGGCCATCTCAGGAGGAACACTaGGGTAGGTACTCATGGAAAGGAGGGGAGTCCTGC +
Preference number: 3 (lower is better)
Translates to: QPSNHRPSQEEH*GRYSWKGGESC
Trigger: GCAGGACTCCCCTCCTTTCCATGAGTACCTACCCCAGTGTTCCTCCTGAGATGGCCTATGGTTGGATGGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR-3UTR CAA 90 bp GCTCCAAGGCTTATTAAGTACCTAATGTCAACAACATGGCCCCATTCCCCTTGCATGGCCCCATTCCCCTaGCCCAGATGGACCCTTCCC +
Preference number: 3 (lower is better)
Translates to: APRLIKYLMSTTWPHSPCMAPFP*PRWTLP
Trigger: GGGAAGGGTCCATCTGGGCAAGGGGAATGGGGCCAT...GCAAGGGGAATGGGGCCATGTTGTTGACATTAGGTACTTAATAAGCCTTGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR CAA 90 bp GTCAGGTATCTAGGAAGAAGCCTCAGCTACTGTTTCTGTTTAAGGTCTCTGGGGATGGCCCCATTCCCCTaGCCCAGATGGACCCTTCCC +
Preference number: 3 (lower is better)
Translates to: VRYLGRSLSYCFCLRSLGMAPFP*PRWTLP
Trigger: GGGAAGGGTCCATCTGGGCAAGGGGAATGGGGCCAT...CCCCAGAGACCTTAAACAGAAACAGTAGCTGAGGCTTCTTCCTAGATACCTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR CAA 90 bp CTAATGTCAACAACATGGCCCCATTCCCCTTGCCCAGATGGACCCTTCCCACCCACCACTCAAACGGGCTaGGACATGCGATTTTTCCAG +
Preference number: 3 (lower is better)
Translates to: LMSTTWPHSPCPDGPFPPTTQTG*DMRFFQ
Trigger: CTGGAAAAATCGCATGTCCAAGCCCGTTTGAGTGGT...GGGTGGGAAGGGTCCATCTGGGCAAGGGGAATGGGGCCATGTTGTTGACATTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR CAA 90 bp CACCATCCCACTATCCAGGTTCAGGCAGTAGTGGTCACTGTGATTATGATACTGGTAGACACAGCCAGGTaGGGCATAGTGGGGCCGAGG +
Preference number: 3 (lower is better)
Translates to: HHPTIQVQAVVVTVIMILVDTAR*GIVGPR
Trigger: CCTCGGCCCCACTATGCCCAACCTGGCTGTGTCTAC...CAGTATCATAATCACAGTGACCACTACTGCCTGAACCTGGATAGTGGGATGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CAA 90 bp GAGCAGGAGGCAGGACTGATTAGCTCCACTGGATCCCAGATGCTTGAGGTTCTCCTCTTGGTCCTCATTTaGTACCATCCGCTGCAGCAG +
Preference number: 3 (lower is better)
Translates to: EQEAGLISSTGSQMLEVLLLVLI*YHPLQQ
Trigger: CTGCTGCAGCGGATGGTACAAAATGAGGACCAAGAG...GAGAACCTCAAGCATCTGGGATCCAGTGGAGCTAATCAGTCCTGCCTCCTGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CAA 90 bp AAACGGGCTTGGACATGCGATTTTTCCAGCTCCACATGTGAGTATCTTATACCCCCCAGGGTTCGGTCCTaGCTGTGGCTACGGCCTGGA +
Preference number: 3 (lower is better)
Translates to: KRAWTCDFSSSTCEYLIPPRVRS*LWLRPG
Trigger: TCCAGGCCGTAGCCACAGCAAGGACCGAACCCTGGG...GGGTATAAGATACTCACATGTGGAGCTGGAAAAATCGCATGTCCAAGCCCGTTT
54% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CAA 90 bp GATAGGACTGACGGACCGGGTGGCCATCAGGGGTGCGCCGACTATCCCTCATCAGCAAAGATCATTCTATaGAGGCAGTCATCAACACAG +
Preference number: 3 (lower is better)
Translates to: DRTDGPGGHQGCADYPSSAKIIL*RQSSTQ
Trigger: CTGTGTTGATGACTGCCTCAATAGAATGATCTTTGC...TGATGAGGGATAGTCGGCGCACCCCTGATGGCCACCCGGTCCGTCAGTCCTATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CAA 90 bp CTGGATATACCTCCTGATGTCATTCAGGAGGGTGAGGGAAGATGGGCTAGGGGTGTTGAGTCGTTCCCGTaGGTTATGCCGTCGTTCCTC +
Preference number: 3 (lower is better)
Translates to: LDIPPDVIQEGEGRWARGVESFP*VMPSFL
Trigger: GAGGAACGACGGCATAACCAACGGGAACGACTCAAC...ACCCCTAGCCCATCTTCCCTCACCCTCCTGAATGACATCAGGAGGTATATCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR GCA 72 bp TTGAGCAAGATCTGGTTGAGTCGTTCCCGTTGGTTATaGCGTCGTTCCTCAGGGGTACAGGTTGACTGGGGT +
Preference number: 3 (lower is better)
Translates to: LSKIWLSRSRWL*RRSSGVQVDWG
Trigger: ACCCCAGTCAACCTGTACCCCTGAGGAACGACGGCATAACCAACGGGAACGACTCAACCAGATCTTGCTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR CCA 72 bp GTCCTTGCTGTGGCTACGGCCTGGACTGGAAGAAGGTaGTGCAGAGGCAGTTGCAATCACAGCATCAATACT +
Preference number: 3 (lower is better)
Translates to: VLAVATAWTGRR*CRGSCNHSINT
Trigger: AGTATTGATGCTGTGATTGCAACTGCCTCTGCACCACCTTCTTCCAGTCCAGGCCGTAGCCACAGCAAGGAC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CAA 90 bp AAACGGGCTTGGACATGCGATTTTTCCAGCTCCACATGTGAGTATCTTATACCCATGGCCCCATTCCCCTaGCCCAGATGGACCCTTCCC +
Preference number: 3 (lower is better)
Translates to: KRAWTCDFSSSTCEYLIPMAPFP*PRWTLP
Trigger: GGGAAGGGTCCATCTGGGCAAGGGGAATGGGGCCAT...GGGTATAAGATACTCACATGTGGAGCTGGAAAAATCGCATGTCCAAGCCCGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR CAA 90 bp ACTTTGACCTGGTTGGGCAAGAAAGGAGAGACAAACTTCCCTAGTCAGGTATCTATGGCCCCATTCCCCTaGCCCAGATGGACCCTTCCC +
Preference number: 3 (lower is better)
Translates to: TLTWLGKKGETNFPSQVSMAPFP*PRWTLP
Trigger: GGGAAGGGTCCATCTGGGCAAGGGGAATGGGGCCAT...AGATACCTGACTAGGGAAGTTTGTCTCTCCTTTCTTGCCCAACCAGGTCAAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR CAA 90 bp GCCTCTGTATCCTCTGGTTACAGCATTGCTCGCCACATGGGCAAGTGTTGGGGGCCTGGCCCTATCCCTTaGGATTTTGAGTTATACCTG +
Preference number: 3 (lower is better)
Translates to: ASVSSGYSIARHMGKCWGPGPIP*DFELYL
Trigger: CAGGTATAACTCAAAATCCAAAGGGATAGGGCCAGG...CCCCCAACACTTGCCCATGTGGCGAGCAATGCTGTAACCAGAGGATACAGAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CAA 90 bp GAGCAGGAGGCAGGACTGATTAGCTCCACTGGATCCCAGATGCTTGAGGTTCTCTCCCATGATTCCATTTaGGGGAGTAGAGGTAGGGAG +
Preference number: 3 (lower is better)
Translates to: EQEAGLISSTGSQMLEVLSHDSI*GSRGRE
Trigger: CTCCCTACCTCTACTCCCCAAAATGGAATCATGGGA...GAGAACCTCAAGCATCTGGGATCCAGTGGAGCTAATCAGTCCTGCCTCCTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR CAA 90 bp GAGCAGGAGGCAGGACTGATTAGCTCCACTGGATCCCAGATGCTTGAGGTTCTCACCACTCAAACGGGCTaGGACATGCGATTTTTCCAG +
Preference number: 3 (lower is better)
Translates to: EQEAGLISSTGSQMLEVLTTQTG*DMRFFQ
Trigger: CTGGAAAAATCGCATGTCCAAGCCCGTTTGAGTGGT...GAGAACCTCAAGCATCTGGGATCCAGTGGAGCTAATCAGTCCTGCCTCCTGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR CAA 90 bp TGCGCCGACTATCCCTCATCAGATACACACAGTCACCCTGACGAAGCAGCAAGTCTCTTGGTCCTCATTTaGTACCATCCGCTGCAGCAG +
Preference number: 3 (lower is better)
Translates to: CADYPSSDTHSHPDEAASLLVLI*YHPLQQ
Trigger: CTGCTGCAGCGGATGGTACAAAATGAGGACCAAGAG...ACTTGCTGCTTCGTCAGGGTGACTGTGTGTATCTGATGAGGGATAGTCGGCGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR TCA 72 bp AGGTGTCTGCAATCCCAAGGCCAATGGACTAGATTCTaGAGGCTCTCGGTGGACCCACTGTTCCTCTCTGTT +
Preference number: 3 (lower is better)
Translates to: RCLQSQGQWTRF*RLSVDPLFLSV
Trigger: AACAGAGAGGAACAGTGGGTCCACCGAGAGCCTTCAGAATCTAGTCCATTGGCCTTGGGATTGCAGACACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR TCA 72 bp TGGGTTGACAAACTGAGCAGCCTGGAATGCTTGCATTaGTACGACAGCCTGAAGGGGACATTTCCGAGGTCG +
Preference number: 3 (lower is better)
Translates to: WVDKLSSLECLH*YDSLKGTFPRS
Trigger: CGACCTCGGAAATGTCCCCTTCAGGCTGTCGTATCAATGCAAGCATTCCAGGCTGCTCAGTTTGTCAACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR TCA 72 bp GTCGTCCTTCTCATGCCCATTCTCCTTTTCAGAGACTaGGGTCTCACTGCTGTCTGCCTCACTTGCTGTCTC +
Preference number: 3 (lower is better)
Translates to: VVLLMPILLFRD*GLTAVCLTCCL
Trigger: GAGACAGCAAGTGAGGCAGACAGCAGTGAGACCTCAGTCTCTGAAAAGGAGAATGGGCATGAGAAGGACGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR GCA 72 bp ACCCATTCATGCCTCTGTATCCTCTGGTTACAGCATTaGTCGCCACATGGGCAAGTGTTGGGGGAACACTCA +
Preference number: 3 (lower is better)
Translates to: THSCLCILWLQH*SPHGQVLGEHS
Trigger: TGAGTGTTCCCCCAACACTTGCCCATGTGGCGAGCAATGCTGTAACCAGAGGATACAGAGGCATGAATGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR CCA 72 bp AGGAGATTGAGCAAGATCTGGTTGAGTCGTTCCCGTTaGTTATGCCGTCGTTCCTCAGGGGTACAGGTTGAC +
Preference number: 3 (lower is better)
Translates to: RRLSKIWLSRSR*LCRRSSGVQVD
Trigger: GTCAACCTGTACCCCTGAGGAACGACGGCATAACCAACGGGAACGACTCAACCAGATCTTGCTCAATCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CAA 90 bp GAGCAGGAGGCAGGACTGATTAGCTCCACTGGATCCCAGATGCTTGAGGTTCTCCTGGATCCCAGATGCTaGAGGTTCTCATTCTTTGAG +
Preference number: 3 (lower is better)
Translates to: EQEAGLISSTGSQMLEVLLDPRC*RFSFFE
Trigger: CTCAAAGAATGAGAACCTCAAGCATCTGGGATCCAG...GAGAACCTCAAGCATCTGGGATCCAGTGGAGCTAATCAGTCCTGCCTCCTGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR CAA 90 bp AACAAAAGAAACCACTCAAACGGGCTTGGACATGCGATTTTTCCAGCTCCACATATGGCCCCATTCCCCTaGCCCAGATGGACCCTTCCC +
Preference number: 3 (lower is better)
Translates to: NKRNHSNGLGHAIFPAPHMAPFP*PRWTLP
Trigger: GGGAAGGGTCCATCTGGGCAAGGGGAATGGGGCCAT...ATGTGGAGCTGGAAAAATCGCATGTCCAAGCCCGTTTGAGTGGTTTCTTTTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR CAA 90 bp CTGGATATACCTCCTGATGTCATTCAGGAGGGTGAGGGAAGATGGGCTAGGGGTTCCCATGATTCCATTTaGGGGAGTAGAGGTAGGGAG +
Preference number: 3 (lower is better)
Translates to: LDIPPDVIQEGEGRWARGSHDSI*GSRGRE
Trigger: CTCCCTACCTCTACTCCCCAAAATGGAATCATGGGA...ACCCCTAGCCCATCTTCCCTCACCCTCCTGAATGACATCAGGAGGTATATCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR CAA 90 bp ACACACAAGAACTACAGCGCATTAAAAACAGCATGTGTGCTGGCGGGGGCCTGGTCCCATGATTCCATTTaGGGGAGTAGAGGTAGGGAG +
Preference number: 3 (lower is better)
Translates to: THKNYSALKTACVLAGAWSHDSI*GSRGRE
Trigger: CTCCCTACCTCTACTCCCCAAAATGGAATCATGGGA...CCAGGCCCCCGCCAGCACACATGCTGTTTTTAATGCGCTGTAGTTCTTGTGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR CAA 90 bp AGAACCGACGGGATGGAGAGTGGTGTGTTTCGTGGGGACGGAAATAATGGTGACTGCTCAAGGGGATCATaGGCATCCCCTCTCTCTTTT +
Preference number: 3 (lower is better)
Translates to: RTDGMESGVFRGDGNNGDCSRGS*ASPLSF
Trigger: AAAAGAGAGAGGGGATGCCAATGATCCCCTTGAGCA...GTCACCATTATTTCCGTCCCCACGAAACACACCACTCTCCATCCCGTCGGTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CAA 90 bp ACACACAAGAACTACAGCGCATTAAAAACAGCATGTGTGCTGGCGGGGGCCTGGTGCTCAAGGGGATCATaGGCATCCCCTCTCTCTTTT +
Preference number: 3 (lower is better)
Translates to: THKNYSALKTACVLAGAWCSRGS*ASPLSF
Trigger: AAAAGAGAGAGGGGATGCCAATGATCCCCTTGAGCA...CCAGGCCCCCGCCAGCACACATGCTGTTTTTAATGCGCTGTAGTTCTTGTGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR CAA 90 bp CTGGATATACCTCCTGATGTCATTCAGGAGGGTGAGGGAAGATGGGCTAGGGGTTGCTCAAGGGGATCATaGGCATCCCCTCTCTCTTTT +
Preference number: 3 (lower is better)
Translates to: LDIPPDVIQEGEGRWARGCSRGS*ASPLSF
Trigger: AAAAGAGAGAGGGGATGCCAATGATCCCCTTGAGCA...ACCCCTAGCCCATCTTCCCTCACCCTCCTGAATGACATCAGGAGGTATATCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR CAA 90 bp AGAACCGACGGGATGGAGAGTGGTGTGTTTCGTGGGGACGGAAATAATGGTGACGTGGTGCAGAGGCAGTaGCAATCACAGCATCAATAC +
Preference number: 3 (lower is better)
Translates to: RTDGMESGVFRGDGNNGDVVQRQ*QSQHQY
Trigger: GTATTGATGCTGTGATTGCAACTGCCTCTGCACCAC...GTCACCATTATTTCCGTCCCCACGAAACACACCACTCTCCATCCCGTCGGTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CAA 90 bp CCGGGTGGCCATCAGGGGTGCGCCGACTATCCCTCATCAGATACACACAGTCACAGTGAGATGCTATTATaGCAAGAGTCACTTGTGACT +
Preference number: 3 (lower is better)
Translates to: PGGHQGCADYPSSDTHSHSEMLL*QESLVT
Trigger: AGTCACAAGTGACTCTTGCAATAATAGCATCTCACT...GTGACTGTGTGTATCTGATGAGGGATAGTCGGCGCACCCCTGATGGCCACCCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CAA 90 bp CGTATAAAGGTCCAACACACAGCAGGTCCCCACTACAGCCTCCAAGGGAATGATTGCTGTCTGCCTCACTaGCTGTCTCTCCCACAATCT +
Preference number: 3 (lower is better)
Translates to: RIKVQHTAGPHYSLQGNDCCLPH*LSLPQS
Trigger: AGATTGTGGGAGAGACAGCAAGTGAGGCAGACAGCA...ATCATTCCCTTGGAGGCTGTAGTGGGGACCTGCTGTGTGTTGGACCTTTATACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CAA 90 bp GTATCCTCTGGTTACAGCATTGCTCGCCACATGGGCAAGTGTTGGGGGAACACTCTGGATCCCAGATGCTaGAGGTTCTCATTCTTTGAG +
Preference number: 3 (lower is better)
Translates to: VSSGYSIARHMGKCWGNTLDPRC*RFSFFE
Trigger: CTCAAAGAATGAGAACCTCAAGCATCTGGGATCCAG...AGTGTTCCCCCAACACTTGCCCATGTGGCGAGCAATGCTGTAACCAGAGGATAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CAA 90 bp ACACACAAGAACTACAGCGCATTAAAAACAGCATGTGTGCTGGCGGGGGCCTGGCCTGGCCCTATCCCTTaGGATTTTGAGTTATACCTG +
Preference number: 3 (lower is better)
Translates to: THKNYSALKTACVLAGAWPGPIP*DFELYL
Trigger: CAGGTATAACTCAAAATCCAAAGGGATAGGGCCAGG...CCAGGCCCCCGCCAGCACACATGCTGTTTTTAATGCGCTGTAGTTCTTGTGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR CAA 90 bp GTGTTTGTGCTCAACCATCCAACCATAGGCCATCTCAGGAGGAACACTGGGGTAACAGGTGGCTTCATCTaGACTGGTGACCTCATTTGC +
Preference number: 3 (lower is better)
Translates to: VFVLNHPTIGHLRRNTGVTGGFI*TGDLIC
Trigger: GCAAATGAGGTCACCAGTCAAGATGAAGCCACCTGT...TACCCCAGTGTTCCTCCTGAGATGGCCTATGGTTGGATGGTTGAGCACAAACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR-3UTR CAA 90 bp GATCAAAAGCATAGGGTTTGGTGCAGACAGGATAGCGGTTCCGGTGGATCTTGTGCACATTTTCCGAGCTaGGCGTTGCATAGCTTCCAC +
Preference number: 3 (lower is better)
Translates to: DQKHRVWCRQDSGSGGSCAHFPS*ALHSFH
Trigger: GTGGAAGCTATGCAACGCCAAGCTCGGAAAATGTGC...ACAAGATCCACCGGAACCGCTATCCTGTCTGCACCAAACCCTATGCTTTTGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CAA 90 bp GCTGTCTGCAGGGCAGAGAACTGGGTCATGAAGACATCAGACTTGATATTCCCACCTGGAATGCTTGCATaGATACGACAGCCTGAAGGG +
Preference number: 3 (lower is better)
Translates to: AVCRAENWVMKTSDLIFPPGMLA*IRQPEG
Trigger: CCCTTCAGGCTGTCGTATCAATGCAAGCATTCCAGG...TGGGAATATCAAGTCTGATGTCTTCATGACCCAGTTCTCTGCCCTGCAGACAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CAA 90 bp GCTCCAAGGCTTATTAAGTACCTAATGTCAACAACATGGCCCCATTCCCCTTGCCCACATGGGCAAGTGTaGGGGGAACACTCAGCAAAG +
Preference number: 3 (lower is better)
Translates to: APRLIKYLMSTTWPHSPCPHGQV*GEHSAK
Trigger: CTTTGCTGAGTGTTCCCCCAACACTTGCCCATGTGG...GCAAGGGGAATGGGGCCATGTTGTTGACATTAGGTACTTAATAAGCCTTGGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CAA 90 bp CGTATAAAGGTCCAACACACAGCAGGTCCCCACTACAGCCTCCAAGGGAATGATTGGAGCTGCCAGTGCTaGCCGGGAAGAATCTTTATA +
Preference number: 3 (lower is better)
Translates to: RIKVQHTAGPHYSLQGNDWSCQC*PGRIFI
Trigger: TATAAAGATTCTTCCCGGCAAGCACTGGCAGCTCCA...ATCATTCCCTTGGAGGCTGTAGTGGGGACCTGCTGTGTGTTGGACCTTTATACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR TCA 72 bp ACTTGCTGTCTCTCCCACAATCTCATCAATCTGGGCTaGTGCCTCATGCCGGGCATTGTAATAGGCCTTTCG +
Preference number: 3 (lower is better)
Translates to: TCCLSHNLINLG*CLMPGIVIGLS
Trigger: CGAAAGGCCTATTACAATGCCCGGCATGAGGCATCAGCCCAGATTGATGAGATTGTGGGAGAGACAGCAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR TCA 72 bp TCCTCCAGGCTGGGTATCTCATTGGCTGCTTGCTCTTaGCTGGCTAGAACCTCTTCAATCAAGGGTAGAGCA +
Preference number: 3 (lower is better)
Translates to: SSRLGISLAACS*LARTSSIKGRA
Trigger: TGCTCTACCCTTGATTGAAGAGGTTCTAGCCAGTCAAGAGCAAGCAGCCAATGAGATACCCAGCCTGGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR GCA 72 bp CTTGCTGTGGCTACGGCCTGGACTGGAAGAAGGTGGTaGAGAGGCAGTTGCAATCACAGCATCAATACTTTT +
Preference number: 3 (lower is better)
Translates to: LAVATAWTGRRW*RGSCNHSINTF
Trigger: AAAAGTATTGATGCTGTGATTGCAACTGCCTCTGCACCACCTTCTTCCAGTCCAGGCCGTAGCCACAGCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR CCA 72 bp GCTCCAAGGCTTATTAAGTACCTAATGTCAACAACATaGCCCCATTCCCCTTGCCCAGATGGACCCTTCCCA +
Preference number: 3 (lower is better)
Translates to: APRLIKYLMSTT*PHSPCPDGPFP
Trigger: TGGGAAGGGTCCATCTGGGCAAGGGGAATGGGGCCATGTTGTTGACATTAGGTACTTAATAAGCCTTGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR CCA 72 bp CTTCTGGTCAAGAGAGTAGGAAGGAAGGAGACACCCTaGATATACCTCCTGATGTCATTCAGGAGGGTGAGG +
Preference number: 3 (lower is better)
Translates to: LLVKRVGRKETP*IYLLMSFRRVR
Trigger: CCTCACCCTCCTGAATGACATCAGGAGGTATATCCAGGGTGTCTCCTTCCTTCCTACTCTCTTGACCAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR CCA 72 bp CCTCTGTATCCTCTGGTTACAGCATTGCTCGCCACATaGGCAAGTGTTGGGGGAACACTCAGCAAAGATCAT +
Preference number: 3 (lower is better)
Translates to: PLYPLVTALLAT*ASVGGTLSKDH
Trigger: ATGATCTTTGCTGAGTGTTCCCCCAACACTTGCCCATGTGGCGAGCAATGCTGTAACCAGAGGATACAGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR CCA 72 bp AGAACCTCTTCAATCAAGGGTAGAGCATCATCCTCCTaGCCCAAGTCTTTTAGGGGTGGCTTTGAGCGCTCA +
Preference number: 3 (lower is better)
Translates to: RTSSIKGRASSS*PKSFRGGFERS
Trigger: TGAGCGCTCAAAGCCACCCCTAAAAGACTTGGGCCAGGAGGATGATGCTCTACCCTTGATTGAAGAGGTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CAA 90 bp CTGGATATACCTCCTGATGTCATTCAGGAGGGTGAGGGAAGATGGGCTAGGGGTTTTACTTTGACCTGGTaGGGCAAGAAAGGAGAGACA +
Preference number: 3 (lower is better)
Translates to: LDIPPDVIQEGEGRWARGFTLTW*GKKGET
Trigger: TGTCTCTCCTTTCTTGCCCAACCAGGTCAAAGTAAA...ACCCCTAGCCCATCTTCCCTCACCCTCCTGAATGACATCAGGAGGTATATCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR CAA 90 bp GCACAGCAGACACACAAGAACTACAGCGCATTAAAAACAGCATGTGTGCTGGCGACCACTCAAACGGGCTaGGACATGCGATTTTTCCAG +
Preference number: 3 (lower is better)
Translates to: AQQTHKNYSALKTACVLATTQTG*DMRFFQ
Trigger: CTGGAAAAATCGCATGTCCAAGCCCGTTTGAGTGGT...CGCCAGCACACATGCTGTTTTTAATGCGCTGTAGTTCTTGTGTGTCTGCTGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR CAA 90 bp GCAGTAATGGGGGAAGAATCTGTCCTAATGCTGACCCAGCTGCCTGTTGAGCTGTTCTTCGGTTTTGTCTaGGAAGACTTGGAAGGAGGA +
Preference number: 3 (lower is better)
Translates to: AVMGEESVLMLTQLPVELFFGFV*EDLEGG
Trigger: TCCTCCTTCCAAGTCTTCCAAGACAAAACCGAAGAA...CAGCTCAACAGGCAGCTGGGTCAGCATTAGGACAGATTCTTCCCCCATTACTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR-3UTR CAA 90 bp GCCGATTTAGTGAAGTGTCCTGTGCAGAAAAGAGTCCAGGGCTGTCAGTTAATTACCGCCTCCTCCCCTTaGAGGCCTTCTTCATTGCAA +
Preference number: 3 (lower is better)
Translates to: ADLVKCPVQKRVQGCQLITASSP*RPSSLQ
Trigger: TTGCAATGAAGAAGGCCTCAAAGGGGAGGAGGCGGT...AATTAACTGACAGCCCTGGACTCTTTTCTGCACAGGACACTTCACTAAATCGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR-3UTR CAA 90 bp TCAAGGGTAGAGCATCATCCTCCTGGCCCAAGTCTTTTAGGGGTGGCTTTGAGCTTTCTCCATGGGCTCTaGGTCCTCATTTTGTACCAT +
Preference number: 3 (lower is better)
Translates to: SRVEHHPPGPSLLGVALSFLHGL*VLILYH
Trigger: ATGGTACAAAATGAGGACCAAGAGCCCATGGAGAAA...GCTCAAAGCCACCCCTAAAAGACTTGGGCCAGGAGGATGATGCTCTACCCTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CAA 90 bp GACATGCAGACTAACTCTGTATCTATTTGCAGTGATGTAGTGCTTTGCCCCGCACCACATGGGCAAGTGTaGGGGGAACACTCAGCAAAG +
Preference number: 3 (lower is better)
Translates to: DMQTNSVSICSDVVLCPAPHGQV*GEHSAK
Trigger: CTTTGCTGAGTGTTCCCCCAACACTTGCCCATGTGG...TGCGGGGCAAAGCACTACATCACTGCAAATAGATACAGAGTTAGTCTGCATGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CAA 90 bp TGGCTAGAACCTCTTCAATCAAGGGTAGAGCATCATCCTCCTGGCCCAAGTCTTGGGTCACAGCTATGGTaGATGAATCGGGCCTCATTT +
Preference number: 3 (lower is better)
Translates to: WLEPLQSRVEHHPPGPSLGSQLW*MNRASF
Trigger: AAATGAGGCCCGATTCATCAACCATAGCTGTGACCC...AAGACTTGGGCCAGGAGGATGATGCTCTACCCTTGATTGAAGAGGTTCTAGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CAA 90 bp GCAGGTCCCCACTACAGCCTCCAAGGGAATGATCTCATAGAGTGGCACCCGAAAATGAAGACATCAGACTaGATATTCCCATCATCTCGG +
Preference number: 3 (lower is better)
Translates to: AGPHYSLQGNDLIEWHPKMKTSD*IFPSSR
Trigger: CCGAGATGATGGGAATATCAAGTCTGATGTCTTCAT...TTTCGGGTGCCACTCTATGAGATCATTCCCTTGGAGGCTGTAGTGGGGACCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CAA 90 bp GCTCCAAGGCTTATTAAGTACCTAATGTCAACAACATGGCCCCATTCCCCTTGCTGCTGTCTGCCTCACTaGCTGTCTCTCCCACAATCT +
Preference number: 3 (lower is better)
Translates to: APRLIKYLMSTTWPHSPCCCLPH*LSLPQS
Trigger: AGATTGTGGGAGAGACAGCAAGTGAGGCAGACAGCA...GCAAGGGGAATGGGGCCATGTTGTTGACATTAGGTACTTAATAAGCCTTGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR TCA 72 bp GGAAGAATCTGTCCTAATGCTGACCCAGCTGCCTGTTaGGCTGTTTGCTCAAGAACAGCAAGGCTAGTAGGA +
Preference number: 3 (lower is better)
Translates to: GRICPNADPAAC*AVCSRTARLVG
Trigger: TCCTACTAGCCTTGCTGTTCTTGAGCAAACAGCTCAACAGGCAGCTGGGTCAGCATTAGGACAGATTCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR TCA 72 bp TGGGGTTGTTCAGAAGAACGGTGTTCTCTGTGTTTGTaGCGGTGCCTGTGTTTGTGCTCAACCATCCAACCA +
Preference number: 3 (lower is better)
Translates to: WGCSEERCSLCL*RCLCLCSTIQP
Trigger: TGGTTGGATGGTTGAGCACAAACACAGGCACCGTCACAAACACAGAGAACACCGTTCTTCTGAACAACCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR TCA 72 bp CCTTCCTCGTCTCTGTTCAATTCTGGGTTGACAAACTaGGCAGCCTGGAATGCTTGCATTGATACGACAGCC +
Preference number: 3 (lower is better)
Translates to: PSSSLFNSGLTN*AAWNACIDTTA
Trigger: GGCTGTCGTATCAATGCAAGCATTCCAGGCTGCTCAGTTTGTCAACCCAGAATTGAACAGAGACGAGGAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR TCA 72 bp TGGCTGTTTTTGCTGCTGGTGAGTCCATTCACACGCTaGCTCTTGCCTCCGATGATTCCTCGACATTTCTCA +
Preference number: 3 (lower is better)
Translates to: WLFLLLVSPFTR*LLPPMIPRHFS
Trigger: TGAGAAATGTCGAGGAATCATCGGAGGCAAGAGTCAGCGTGTGAATGGACTCACCAGCAGCAAAAACAGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR TCA 72 bp TGGGTCACACTGCTCACAAAGGTAGTGCTCCACATCTaGGTTCACTCCCATACAATCACAGTGCTGCCATAC +
Preference number: 3 (lower is better)
Translates to: WVTLLTKVVLHI*VHSHTITVLPY
Trigger: GTATGGCAGCACTGTGATTGTATGGGAGTGAACTCAGATGTGGAGCACTACCTTTGTGAGCAGTGTGACCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR TCA 72 bp TGGGATAAACAAAGTACGCCTTCGCAGTTTCCTGCCTaGTCCTTCCTCCAGCAAGTAGGTCACATCAATGGC +
Preference number: 3 (lower is better)
Translates to: WDKQSTPSQFPA*SFLQQVGHING
Trigger: GCCATTGATGTGACCTACTTGCTGGAGGAAGGATCAGGCAGGAAACTGCGAAGGCGTACTTTGTTTATCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR CCA 72 bp TGGGGAAGGGAGATTGCTTTCTCCTACTGCACTGAATaGGGATTTAGCGGTAGATACATCAGAAGCACCTCC +
Preference number: 3 (lower is better)
Translates to: WGREIAFSYCTE*GFSGRYIRSTS
Trigger: GGAGGTGCTTCTGATGTATCTACCGCTAAATCCCCATTCAGTGCAGTAGGAGAAAGCAATCTCCCTTCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR CCA 72 bp AGGACAGATCGGGAAGAGCCAGTGTCCATAGAAACCTaGGGTTGTTCAGAAGAACGGTGTTCTCTGTGTTTG +
Preference number: 3 (lower is better)
Translates to: RTDREEPVSIET*GCSEERCSLCL
Trigger: CAAACACAGAGAACACCGTTCTTCTGAACAACCCCAGGTTTCTATGGACACTGGCTCTTCCCGATCTGTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR CCA 72 bp AGGCTGCAAGGTACTTTCAGGTTCAGAAGGTTTAGCTaGGGTTTCAGAAGGACTGGGAATCTCAACTGGTGC +
Preference number: 3 (lower is better)
Translates to: RLQGTFRFRRFS*GFRRTGNLNWC
Trigger: GCACCAGTTGAGATTCCCAGTCCTTCTGAAACCCCAGCTAAACCTTCTGAACCTGAAAGTACCTTGCAGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR CCA 72 bp CCAGGCTGGGTATCTCATTGGCTGCTTGCTCTTGACTaGCTAGAACCTCTTCAATCAAGGGTAGAGCATCAT +
Preference number: 3 (lower is better)
Translates to: PGWVSHWLLALD*LEPLQSRVEHH
Trigger: ATGATGCTCTACCCTTGATTGAAGAGGTTCTAGCCAGTCAAGAGCAAGCAGCCAATGAGATACCCAGCCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CAA 90 bp TATATTAGCAGCATTTATATTTTCCGCAATCACACAGCCTACAGACATGCAGACATGGCCCCATTCCCCTaGCCCAGATGGACCCTTCCC +
Preference number: 3 (lower is better)
Translates to: YISSIYIFRNHTAYRHADMAPFP*PRWTLP
Trigger: GGGAAGGGTCCATCTGGGCAAGGGGAATGGGGCCAT...GTCTGCATGTCTGTAGGCTGTGTGATTGCGGAAAATATAAATGCTGCTAATATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR CAA 90 bp CACAAAGGTAGTGCTCCACATCTGAGTTCACTCCCATACAATCACAGTGCTGCCCCTGGCCCTATCCCTTaGGATTTTGAGTTATACCTG +
Preference number: 3 (lower is better)
Translates to: HKGSAPHLSSLPYNHSAAPGPIP*DFELYL
Trigger: CAGGTATAACTCAAAATCCAAAGGGATAGGGCCAGG...GGCAGCACTGTGATTGTATGGGAGTGAACTCAGATGTGGAGCACTACCTTTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CAA 90 bp GCTCCAAGGCTTATTAAGTACCTAATGTCAACAACATGGCCCCATTCCCCTTGCACCACTCAAACGGGCTaGGACATGCGATTTTTCCAG +
Preference number: 3 (lower is better)
Translates to: APRLIKYLMSTTWPHSPCTTQTG*DMRFFQ
Trigger: CTGGAAAAATCGCATGTCCAAGCCCGTTTGAGTGGT...GCAAGGGGAATGGGGCCATGTTGTTGACATTAGGTACTTAATAAGCCTTGGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR CAA 90 bp GTGTTTGTGCTCAACCATCCAACCATAGGCCATCTCAGGAGGAACACTGGGGTACCAAGTCCTAACTTCTaGCCAGACTCTTTATGCACT +
Preference number: 3 (lower is better)
Translates to: VFVLNHPTIGHLRRNTGVPSPNF*PDSLCT
Trigger: AGTGCATAAAGAGTCTGGCAAGAAGTTAGGACTTGG...TACCCCAGTGTTCCTCCTGAGATGGCCTATGGTTGGATGGTTGAGCACAAACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR-3UTR CAA 90 bp CATCAGATACACACAGTCACCCTGACGAAGCAGCAAGTCATCTCGGAGCAAACACAGAAGCAACTAATCTaGGACTTCGAGAGGGAACTC +
Preference number: 3 (lower is better)
Translates to: HQIHTVTLTKQQVISEQTQKQLI*DFEREL
Trigger: GAGTTCCCTCTCGAAGTCCAAGATTAGTTGCTTCTG...TGTTTGCTCCGAGATGACTTGCTGCTTCGTCAGGGTGACTGTGTGTATCTGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676814.1
ENST00000677042.1
3UTR-3UTR CAA 90 bp AACATCTCTCCCAACTGGGGATTTACGCCCATAGTACTTCTCAGCATTCCGAAATCTGATACTTCTTCTTaGGGGGACGTGGGGGCTTCT +
Preference number: 3 (lower is better)
Translates to: NISPNWGFTPIVLLSIPKSDTSS*GDVGAS
Trigger: AGAAGCCCCCACGTCCCCCAAAGAAGAAGTATCAGA...TTTCGGAATGCTGAGAAGTACTATGGGCGTAAATCCCCAGTTGGGAGAGATGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CAA 90 bp CTGGGTCATGAAGACATCAGACTTGATATTCCCATCATCTCGGCAGATCCCATTATGGGCTGGCTGTTTTaGCTGCTGGTGAGTCCATTC +
Preference number: 3 (lower is better)
Translates to: LGHEDIRLDIPIISADPIMGWLF*LLVSPF
Trigger: GAATGGACTCACCAGCAGCAAAAACAGCCAGCCCAT...AATGGGATCTGCCGAGATGATGGGAATATCAAGTCTGATGTCTTCATGACCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CAA 90 bp TCAAGGGTAGAGCATCATCCTCCTGGCCCAAGTCTTTTAGGGGTGGCTTTGAGCAATCTAGTTGGGGTGTaGATATTTTCACTGGGTTCC +
Preference number: 3 (lower is better)
Translates to: SRVEHHPPGPSLLGVALSNLVGV*IFSLGS
Trigger: GGAACCCAGTGAAAATATCAACACCCCAACTAGATT...GCTCAAAGCCACCCCTAAAAGACTTGGGCCAGGAGGATGATGCTCTACCCTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CAA 90 bp CACAAAGGTAGTGCTCCACATCTGAGTTCACTCCCATACAATCACAGTGCTGCCCCATCACAAATTTCTTaGAAGATCTGGGCTAGGCGG +
Preference number: 3 (lower is better)
Translates to: HKGSAPHLSSLPYNHSAAPSQIS*KIWARR
Trigger: CCGCCTAGCCCAGATCTTCAAAGAAATTTGTGATGG...GGCAGCACTGTGATTGTATGGGAGTGAACTCAGATGTGGAGCACTACCTTTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR TCA 72 bp TATGTTCATCACTGCTGGCTGGCTCAGAGTTGGGAGTaGATCCTCCAAGGGATAAGCTTGGAGAACTTTCTG +
Preference number: 3 (lower is better)
Translates to: YVHHCWLAQSWE*ILQGISLENFL
Trigger: CAGAAAGTTCTCCAAGCTTATCCCTTGGAGGATTCACTCCCAACTCTGAGCCAGCCAGCAGTGATGAACATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR TCA 72 bp ACACACAGCAGGTCCCCACTACAGCCTCCAAGGGAATaGTCTCATAGAGTGGCACCCGAAATAGTTCATTAT +
Preference number: 3 (lower is better)
Translates to: THSRSPLQPPRE*SHRVAPEIVHY
Trigger: ATAATGAACTATTTCGGGTGCCACTCTATGAGATCATTCCCTTGGAGGCTGTAGTGGGGACCTGCTGTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR GCA 72 bp GCCTCAATTACATCTGTAACTGTGTCAGGACTGAGGTaGAGTGCTGCTCCTTCCTCGTCTCTGTTCAATTCT +
Preference number: 3 (lower is better)
Translates to: ASITSVTVSGLR*SAAPSSSLFNS
Trigger: AGAATTGAACAGAGACGAGGAAGGAGCAGCACTGCACCTCAGTCCTGACACAGTTACAGATGTAATTGAGGC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR CCA 72 bp GTTCGAACAGATCGAGCTGTCTGCAGGGCAGAGAACTaGGTCATGAAGACATCAGACTTGATATTCCCATCA +
Preference number: 3 (lower is better)
Translates to: VRTDRAVCRAEN*VMKTSDLIFPS
Trigger: TGATGGGAATATCAAGTCTGATGTCTTCATGACCCAGTTCTCTGCCCTGCAGACAGCTCGATCTGTTCGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CAA 90 bp GGTTGGGCAAGAAAGGAGAGACAAACTTCCCTAGTCAGGTATCTAGGAAGAAGCCTGGATCCCAGATGCTaGAGGTTCTCATTCTTTGAG +
Preference number: 3 (lower is better)
Translates to: GWARKERQTSLVRYLGRSLDPRC*RFSFFE
Trigger: CTCAAAGAATGAGAACCTCAAGCATCTGGGATCCAG...GCTTCTTCCTAGATACCTGACTAGGGAAGTTTGTCTCTCCTTTCTTGCCCAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR CAA 90 bp GCACAGCAGACACACAAGAACTACAGCGCATTAAAAACAGCATGTGTGCTGGCGTTTACTTTGACCTGGTaGGGCAAGAAAGGAGAGACA +
Preference number: 3 (lower is better)
Translates to: AQQTHKNYSALKTACVLAFTLTW*GKKGET
Trigger: TGTCTCTCCTTTCTTGCCCAACCAGGTCAAAGTAAA...CGCCAGCACACATGCTGTTTTTAATGCGCTGTAGTTCTTGTGTGTCTGCTGTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR CAA 90 bp CAGTATAGTCTGTTAACTTCTGGTCAAGAGAGTAGGAAGGAAGGAGACACCCTGTCCCATGATTCCATTTaGGGGAGTAGAGGTAGGGAG +
Preference number: 3 (lower is better)
Translates to: QYSLLTSGQESRKEGDTLSHDSI*GSRGRE
Trigger: CTCCCTACCTCTACTCCCCAAAATGGAATCATGGGA...CAGGGTGTCTCCTTCCTTCCTACTCTCTTGACCAGAAGTTAACAGACTATACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR CAA 90 bp AAACGGGCTTGGACATGCGATTTTTCCAGCTCCACATGTGAGTATCTTATACCCTCCCATGATTCCATTTaGGGGAGTAGAGGTAGGGAG +
Preference number: 3 (lower is better)
Translates to: KRAWTCDFSSSTCEYLIPSHDSI*GSRGRE
Trigger: CTCCCTACCTCTACTCCCCAAAATGGAATCATGGGA...GGGTATAAGATACTCACATGTGGAGCTGGAAAAATCGCATGTCCAAGCCCGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR CAA 90 bp AAACGGGCTTGGACATGCGATTTTTCCAGCTCCACATGTGAGTATCTTATACCCTGCTCAAGGGGATCATaGGCATCCCCTCTCTCTTTT +
Preference number: 3 (lower is better)
Translates to: KRAWTCDFSSSTCEYLIPCSRGS*ASPLSF
Trigger: AAAAGAGAGAGGGGATGCCAATGATCCCCTTGAGCA...GGGTATAAGATACTCACATGTGGAGCTGGAAAAATCGCATGTCCAAGCCCGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR CAA 90 bp AAACGGGCTTGGACATGCGATTTTTCCAGCTCCACATGTGAGTATCTTATACCCACCACTCAAACGGGCTaGGACATGCGATTTTTCCAG +
Preference number: 3 (lower is better)
Translates to: KRAWTCDFSSSTCEYLIPTTQTG*DMRFFQ
Trigger: CTGGAAAAATCGCATGTCCAAGCCCGTTTGAGTGGT...GGGTATAAGATACTCACATGTGGAGCTGGAAAAATCGCATGTCCAAGCCCGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR CAA 90 bp GACATGCAGACTAACTCTGTATCTATTTGCAGTGATGTAGTGCTTTGCCCCGCAACCACTCAAACGGGCTaGGACATGCGATTTTTCCAG +
Preference number: 3 (lower is better)
Translates to: DMQTNSVSICSDVVLCPATTQTG*DMRFFQ
Trigger: CTGGAAAAATCGCATGTCCAAGCCCGTTTGAGTGGT...TGCGGGGCAAAGCACTACATCACTGCAAATAGATACAGAGTTAGTCTGCATGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR CAA 90 bp GTGCATAAAAGGCATTTCAGCCATTGCCTCCCTCATCTTAGGGGGTCTCCCTCTTTCCTGATCAAATCCTaGCTAACCAATCCTGCTGTA +
Preference number: 3 (lower is better)
Translates to: VHKRHFSHCLPHLRGSPSFLIKS*LTNPAV
Trigger: TACAGCAGGATTGGTTAGCAAGGATTTGATCAGGAA...AGAGGGAGACCCCCTAAGATGAGGGAGGCAATGGCTGAAATGCCTTTTATGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR-3UTR CAA 90 bp GTGTTTGTGCTCAACCATCCAACCATAGGCCATCTCAGGAGGAACACTGGGGTACTGCTACTTCTATGGTaGTCACTTTCAGATTCTAGC +
Preference number: 3 (lower is better)
Translates to: VFVLNHPTIGHLRRNTGVLLLLW*SLSDSS
Trigger: GCTAGAATCTGAAAGTGACAACCATAGAAGTAGCAG...TACCCCAGTGTTCCTCCTGAGATGGCCTATGGTTGGATGGTTGAGCACAAACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR-3UTR CAA 90 bp GGTTGGGCAAGAAAGGAGAGACAAACTTCCCTAGTCAGGTATCTAGGAAGAAGCCAGAAGCAACTAATCTaGGACTTCGAGAGGGAACTC +
Preference number: 3 (lower is better)
Translates to: GWARKERQTSLVRYLGRSQKQLI*DFEREL
Trigger: GAGTTCCCTCTCGAAGTCCAAGATTAGTTGCTTCTG...GCTTCTTCCTAGATACCTGACTAGGGAAGTTTGTCTCTCCTTTCTTGCCCAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676814.1
ENST00000677042.1
3UTR-3UTR CAA 90 bp CTGATTCCCCAACCTTTTTCCTCAGCTCGAAATCGTTCTAGACATTGCACCCATGTGGTGCAGAGGCAGTaGCAATCACAGCATCAATAC +
Preference number: 3 (lower is better)
Translates to: LIPQPFSSARNRSRHCTHVVQRQ*QSQHQY
Trigger: GTATTGATGCTGTGATTGCAACTGCCTCTGCACCAC...ATGGGTGCAATGTCTAGAACGATTTCGAGCTGAGGAAAAAGGTTGGGGAATCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CAA 90 bp CTGGATATACCTCCTGATGTCATTCAGGAGGGTGAGGGAAGATGGGCTAGGGGTAGTGAGATGCTATTATaGCAAGAGTCACTTGTGACT +
Preference number: 3 (lower is better)
Translates to: LDIPPDVIQEGEGRWARGSEMLL*QESLVT
Trigger: AGTCACAAGTGACTCTTGCAATAATAGCATCTCACT...ACCCCTAGCCCATCTTCCCTCACCCTCCTGAATGACATCAGGAGGTATATCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CAA 90 bp AGACAAACTTCCCTAGTCAGGTATCTAGGAAGAAGCCTCAGCTACTGTTTCTGTGCACATTTTCCGAGCTaGGCGTTGCATAGCTTCCAC +
Preference number: 3 (lower is better)
Translates to: RQTSLVRYLGRSLSYCFCAHFPS*ALHSFH
Trigger: GTGGAAGCTATGCAACGCCAAGCTCGGAAAATGTGC...ACAGAAACAGTAGCTGAGGCTTCTTCCTAGATACCTGACTAGGGAAGTTTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CAA 90 bp TTCCCTAGTCAGGTATCTAGGAAGAAGCCTCAGCTACTGTTTCTGTTTAAGGTCGCACATTTTCCGAGCTaGGCGTTGCATAGCTTCCAC +
Preference number: 3 (lower is better)
Translates to: FPSQVSRKKPQLLFLFKVAHFPS*ALHSFH
Trigger: GTGGAAGCTATGCAACGCCAAGCTCGGAAAATGTGC...GACCTTAAACAGAAACAGTAGCTGAGGCTTCTTCCTAGATACCTGACTAGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CAA 90 bp CCCAGATGCTTGAGGTTCTCATTCTTTGAGGGTCACTTTCGAAAGCTGTTTTCTCCTGGAATGCTTGCATaGATACGACAGCCTGAAGGG +
Preference number: 3 (lower is better)
Translates to: PRCLRFSFFEGHFRKLFSPGMLA*IRQPEG
Trigger: CCCTTCAGGCTGTCGTATCAATGCAAGCATTCCAGG...AGAAAACAGCTTTCGAAAGTGACCCTCAAAGAATGAGAACCTCAAGCATCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CAA 90 bp CAGATGTACACATCTTGCTCCTTTACTCCTTTGGGTCTCCCTTTACAATACGTACCTCTGGTTACAGCATaGCTCGCCACATGGGCAAGT +
Preference number: 3 (lower is better)
Translates to: QMYTSCSFTPLGLPLQYVPLVTA*LATWAS
Trigger: ACTTGCCCATGTGGCGAGCAATGCTGTAACCAGAGG...TACGTATTGTAAAGGGAGACCCAAAGGAGTAAAGGAGCAAGATGTGTACATCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CAA 90 bp ACACACAAGAACTACAGCGCATTAAAAACAGCATGTGTGCTGGCGGGGGCCTGGGCCACACTTACAAAGTaGCTGTTTTTCCACATTGAA +
Preference number: 3 (lower is better)
Translates to: THKNYSALKTACVLAGAWATLTK*LFFHIE
Trigger: TTCAATGTGGAAAAACAGCAACTTTGTAAGTGTGGC...CCAGGCCCCCGCCAGCACACATGCTGTTTTTAATGCGCTGTAGTTCTTGTGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CAA 90 bp GATCAAAAGCATAGGGTTTGGTGCAGACAGGATAGCGGTTCCGGTGGATCTTGTTGCTCCTTTACTCCTTaGGGTCTCCCTTTACAATAC +
Preference number: 3 (lower is better)
Translates to: DQKHRVWCRQDSGSGGSCCSFTP*GLPLQY
Trigger: GTATTGTAAAGGGAGACCCAAAGGAGTAAAGGAGCA...ACAAGATCCACCGGAACCGCTATCCTGTCTGCACCAAACCCTATGCTTTTGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CAA 90 bp AAACGGGCTTGGACATGCGATTTTTCCAGCTCCACATGTGAGTATCTTATACCCCCTGGCCCTATCCCTTaGGATTTTGAGTTATACCTG +
Preference number: 3 (lower is better)
Translates to: KRAWTCDFSSSTCEYLIPPGPIP*DFELYL
Trigger: CAGGTATAACTCAAAATCCAAAGGGATAGGGCCAGG...GGGTATAAGATACTCACATGTGGAGCTGGAAAAATCGCATGTCCAAGCCCGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR CAA 90 bp ACTTTGACCTGGTTGGGCAAGAAAGGAGAGACAAACTTCCCTAGTCAGGTATCTCCTGGCCCTATCCCTTaGGATTTTGAGTTATACCTG +
Preference number: 3 (lower is better)
Translates to: TLTWLGKKGETNFPSQVSPGPIP*DFELYL
Trigger: CAGGTATAACTCAAAATCCAAAGGGATAGGGCCAGG...AGATACCTGACTAGGGAAGTTTGTCTCTCCTTTCTTGCCCAACCAGGTCAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR CAA 90 bp GCTCCAAGGCTTATTAAGTACCTAATGTCAACAACATGGCCCCATTCCCCTTGCTTTACTTTGACCTGGTaGGGCAAGAAAGGAGAGACA +
Preference number: 3 (lower is better)
Translates to: APRLIKYLMSTTWPHSPCFTLTW*GKKGET
Trigger: TGTCTCTCCTTTCTTGCCCAACCAGGTCAAAGTAAA...GCAAGGGGAATGGGGCCATGTTGTTGACATTAGGTACTTAATAAGCCTTGGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR CAA 90 bp TGCATCACTACTTACAGGGCTCTGACCTCCACTAGTCCCAGAAGACTGAGAGCAACAGACAGACCTTGTTaGAAGGAAGGGATTTCAATT +
Preference number: 3 (lower is better)
Translates to: CITTYRALTSTSPRRLRATDRPC*KEGISI
Trigger: AATTGAAATCCCTTCCTTCAAACAAGGTCTGTCTGT...TGCTCTCAGTCTTCTGGGACTAGTGGAGGTCAGAGCCCTGTAAGTAGTGATGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR-3UTR CAA 90 bp AGAGGCAGTTGCAATCACAGCATCAATACTTTTCTCCATGGGCTCTTGGTCCTCTTTCTCCATGGGCTCTaGGTCCTCATTTTGTACCAT +
Preference number: 3 (lower is better)
Translates to: RGSCNHSINTFLHGLLVLFLHGL*VLILYH
Trigger: ATGGTACAAAATGAGGACCAAGAGCCCATGGAGAAA...GAGGACCAAGAGCCCATGGAGAAAAGTATTGATGCTGTGATTGCAACTGCCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CAA 90 bp TGGCTAGAACCTCTTCAATCAAGGGTAGAGCATCATCCTCCTGGCCCAAGTCTTTTTCACGATTGGACATaGGCTTCATCTGTAATTGGG +
Preference number: 3 (lower is better)
Translates to: WLEPLQSRVEHHPPGPSLFHDWT*ASSVIG
Trigger: CCCAATTACAGATGAAGCCAATGTCCAATCGTGAAA...AAGACTTGGGCCAGGAGGATGATGCTCTACCCTTGATTGAAGAGGTTCTAGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CAA 90 bp GATCAAAAGCATAGGGTTTGGTGCAGACAGGATAGCGGTTCCGGTGGATCTTGTAAGTTCCTTTCACGATaGGACATTGGCTTCATCTGT +
Preference number: 3 (lower is better)
Translates to: DQKHRVWCRQDSGSGGSCKFLSR*DIGFIC
Trigger: ACAGATGAAGCCAATGTCCAATCGTGAAAGGAACTT...ACAAGATCCACCGGAACCGCTATCCTGTCTGCACCAAACCCTATGCTTTTGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR TCA 72 bp CTCCTCCCCTTTGAGGCCTTCTTCATTGCAAGAGTCTaGATCATACTGCCCTGTCTGGAGTGTAAATGCAAA +
Preference number: 3 (lower is better)
Translates to: LLPFEAFFIARV*IILPCLECKCK
Trigger: TTTGCATTTACACTCCAGACAGGGCAGTATGATTCAGACTCTTGCAATGAAGAAGGCCTCAAAGGGGAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR GCA 72 bp ACTAACTCTGTATCTATTTGCAGTGATGTAGTGCTTTaGCCCGCATTTCAAACACCAAAACCCGCCTGGCAG +
Preference number: 3 (lower is better)
Translates to: TNSVSICSDVVL*PAFQTPKPAWQ
Trigger: CTGCCAGGCGGGTTTTGGTGTTTGAAATGCGGGGCAAAGCACTACATCACTGCAAATAGATACAGAGTTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR GCA 72 bp ACAAGAAGCCTTAAGCGGTTCCTGAGTGGGGAGCAGTaGTTCGGCTTTAAGGTTTATGGCATCTTTACTGAT +
Preference number: 3 (lower is better)
Translates to: TRSLKRFLSGEQ*FGFKVYGIFTD
Trigger: ATCAGTAAAGATGCCATAAACCTTAAAGCCGAAGCACTGCTCCCCACTCAGGAACCGCTTAAGGCTTCTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR CCA 72 bp CCCAAGGCCAATGGACTAGATTCTGAAGGCTCTCGGTaGACCCACTGTTCCTCTCTGTTTATTAAGCTTTTT +
Preference number: 3 (lower is better)
Translates to: PKANGLDSEGSR*THCSSLFIKLF
Trigger: AAAAAGCTTAATAAACAGAGAGGAACAGTGGGTCCACCGAGAGCCTTCAGAATCTAGTCCATTGGCCTTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR CCA 72 bp AGGCAGTTGCAATCACAGCATCAATACTTTTCTCCATaGGCTCTTGGTCCTCATTTTGTACCATCCGCTGCA +
Preference number: 3 (lower is better)
Translates to: RQLQSQHQYFSP*ALGPHFVPSAA
Trigger: TGCAGCGGATGGTACAAAATGAGGACCAAGAGCCCATGGAGAAAAGTATTGATGCTGTGATTGCAACTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CAA 90 bp TTCCCTAGTCAGGTATCTAGGAAGAAGCCTCAGCTACTGTTTCTGTTTAAGGTCCCTGGCCCTATCCCTTaGGATTTTGAGTTATACCTG +
Preference number: 3 (lower is better)
Translates to: FPSQVSRKKPQLLFLFKVPGPIP*DFELYL
Trigger: CAGGTATAACTCAAAATCCAAAGGGATAGGGCCAGG...GACCTTAAACAGAAACAGTAGCTGAGGCTTCTTCCTAGATACCTGACTAGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR CAA 90 bp AAACGGGCTTGGACATGCGATTTTTCCAGCTCCACATGTGAGTATCTTATACCCTTTACTTTGACCTGGTaGGGCAAGAAAGGAGAGACA +
Preference number: 3 (lower is better)
Translates to: KRAWTCDFSSSTCEYLIPFTLTW*GKKGET
Trigger: TGTCTCTCCTTTCTTGCCCAACCAGGTCAAAGTAAA...GGGTATAAGATACTCACATGTGGAGCTGGAAAAATCGCATGTCCAAGCCCGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR CAA 90 bp CAGTATAGTCTGTTAACTTCTGGTCAAGAGAGTAGGAAGGAAGGAGACACCCTGTTTACTTTGACCTGGTaGGGCAAGAAAGGAGAGACA +
Preference number: 3 (lower is better)
Translates to: QYSLLTSGQESRKEGDTLFTLTW*GKKGET
Trigger: TGTCTCTCCTTTCTTGCCCAACCAGGTCAAAGTAAA...CAGGGTGTCTCCTTCCTTCCTACTCTCTTGACCAGAAGTTAACAGACTATACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR CAA 90 bp CCACAGATACAGCGAATAACATCGTCGTCCTTCTCATGCCCATTCTCCTTTTCATTTACTTTGACCTGGTaGGGCAAGAAAGGAGAGACA +
Preference number: 3 (lower is better)
Translates to: PQIQRITSSSFSCPFSFSFTLTW*GKKGET
Trigger: TGTCTCTCCTTTCTTGCCCAACCAGGTCAAAGTAAA...TGAAAAGGAGAATGGGCATGAGAAGGACGACGATGTTATTCGCTGTATCTGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CAA 90 bp GGGGAAGGAGTAGCTTCTTTTAGAGATGTGAGTTCACTCAAGTGCGAAGGAGAAAGACACAGACAGACCTaGTTTGAAGGAAGGGATTTC +
Preference number: 3 (lower is better)
Translates to: GEGVASFRDVSSLKCEGERHRQT*FEGRDF
Trigger: GAAATCCCTTCCTTCAAACAAGGTCTGTCTGTGTCT...TTCTCCTTCGCACTTGAGTGAACTCACATCTCTAAAAGAAGCTACTCCTTCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR-3UTR CAA 90 bp GCCGATTTAGTGAAGTGTCCTGTGCAGAAAAGAGTCCAGGGCTGTCAGTTAATTCAGATTCTAGCTTGCTaGGACTTTCAGTGGCAACAA +
Preference number: 3 (lower is better)
Translates to: ADLVKCPVQKRVQGCQLIQILAC*DFQWQQ
Trigger: TTGTTGCCACTGAAAGTCCAAGCAAGCTAGAATCTG...AATTAACTGACAGCCCTGGACTCTTTTCTGCACAGGACACTTCACTAAATCGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR-3UTR CAA 90 bp GTCAGGTATCTAGGAAGAAGCCTCAGCTACTGTTTCTGTTTAAGGTCTCTGGGGGGTCTAGGTTTTTCTTaGTGGCCAAGATTTTGTCGT +
Preference number: 3 (lower is better)
Translates to: VRYLGRSLSYCFCLRSLGGLGFS*WPRFCR
Trigger: ACGACAAAATCTTGGCCACAAAGAAAAACCTAGACC...CCCCAGAGACCTTAAACAGAAACAGTAGCTGAGGCTTCTTCCTAGATACCTGAC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR TCA 72 bp TTGATGTTTGTACTACAAGAAGCCTTAAGCGGTTCCTaGGTGGGGAGCAGTGCTTCGGCTTTAAGGTTTATG +
Preference number: 3 (lower is better)
Translates to: LMFVLQEALSGS*VGSSASALRFM
Trigger: CATAAACCTTAAAGCCGAAGCACTGCTCCCCACTCAGGAACCGCTTAAGGCTTCTTGTAGTACAAACATCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR TCA 72 bp ATAGCGGTTCCGGTGGATCTTGTAAAACAGGTGTGCTaGCTTGTCAAGCCGATAATCACAGATGTACACATC +
Preference number: 3 (lower is better)
Translates to: IAVPVDLVKQVC*LVKPIITDVHI
Trigger: GATGTGTACATCTGTGATTATCGGCTTGACAAGTCAGCACACCTGTTTTACAAGATCCACCGGAACCGCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR GCA 72 bp GGAGAACTTTCTGAACAGTCAATCTGTAAAGGTGTCTaGAATCCCAAGGCCAATGGACTAGATTCTGAAGGC +
Preference number: 3 (lower is better)
Translates to: GELSEQSICKGV*NPKANGLDSEG
Trigger: GCCTTCAGAATCTAGTCCATTGGCCTTGGGATTGCAGACACCTTTACAGATTGACTGTTCAGAAAGTTCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR GCA 72 bp CAACCTTTTTCCTCAGCTCGAAATCGTTCTAGACATTaGACCCATTCATGCCTCTGTATCCTCTGGTTACAG +
Preference number: 3 (lower is better)
Translates to: QPFSSARNRSRH*THSCLCILWLQ
Trigger: CTGTAACCAGAGGATACAGAGGCATGAATGGGTGCAATGTCTAGAACGATTTCGAGCTGAGGAAAAAGGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR GCA 72 bp TCCTCAGAGAGATGGCCTCTCCTTTTCTTCAGCTTGTaGTTAGACTTTCTCTTCTCTTTTGACCGTCCAGAT +
Preference number: 3 (lower is better)
Translates to: SSERWPLLFFSL*LDFLFSFDRPD
Trigger: ATCTGGACGGTCAAAAGAGAAGAGAAAGTCTAAGCACAAGCTGAAGAAAAGGAGAGGCCATCTCTCTGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR CCA 72 bp TTGGACTGCAAACTAGTACTTAGGCTTTCAGCAACTTaGCAGTGTTTGTCTGATGCAGATACTGCACCCAGT +
Preference number: 3 (lower is better)
Translates to: LDCKLVLRLSAT*QCLSDADTAPS
Trigger: ACTGGGTGCAGTATCTGCATCAGACAAACACTGCCAAGTTGCTGAAAGCCTAAGTACTAGTTTGCAGTCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR-3UTR CAA 90 bp AAGAGACAGTATAGTCTGTTAACTTCTGGTCAAGAGAGTAGGAAGGAAGGAGACCCTGGCCCTATCCCTTaGGATTTTGAGTTATACCTG +
Preference number: 3 (lower is better)
Translates to: KRQYSLLTSGQESRKEGDPGPIP*DFELYL
Trigger: CAGGTATAACTCAAAATCCAAAGGGATAGGGCCAGG...GTCTCCTTCCTTCCTACTCTCTTGACCAGAAGTTAACAGACTATACTGTCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR CAA 90 bp AAACGGGCTTGGACATGCGATTTTTCCAGCTCCACATGTGAGTATCTTATACCCGCAGTTACAAGTGCTTaGAGCTGTCAACTCACATTT +
Preference number: 3 (lower is better)
Translates to: KRAWTCDFSSSTCEYLIPAVTSA*SCQLTF
Trigger: AAATGTGAGTTGACAGCTCAAAGCACTTGTAACTGC...GGGTATAAGATACTCACATGTGGAGCTGGAAAAATCGCATGTCCAAGCCCGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR CAA 90 bp ACGAGTCAGAGCATCGTCACCATAAGGGGAAATGTACAATTAGGACAGCATTGGGCAGTTACAAGTGCTTaGAGCTGTCAACTCACATTT +
Preference number: 3 (lower is better)
Translates to: TSQSIVTIRGNVQLGQHWAVTSA*SCQLTF
Trigger: AAATGTGAGTTGACAGCTCAAAGCACTTGTAACTGC...CCAATGCTGTCCTAATTGTACATTTCCCCTTATGGTGACGATGCTCTGACTCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR CAA 90 bp TGGGTCTGTAGTTTTGTAAACGTCAGAATACAGCCCTGCTTTCTGATACTTCTTTCCCATGATTCCATTTaGGGGAGTAGAGGTAGGGAG +
Preference number: 3 (lower is better)
Translates to: WVCSFVNVRIQPCFLILLSHDSI*GSRGRE
Trigger: CTCCCTACCTCTACTCCCCAAAATGGAATCATGGGA...AAGAAGTATCAGAAAGCAGGGCTGTATTCTGACGTTTACAAAACTACAGACCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CAA 90 bp GGGGAAGGAGTAGCTTCTTTTAGAGATGTGAGTTCACTCAAGTGCGAAGGAGAACTAACTTCTTCGGTTTaGTCTTGGAAGACTTGGAAG +
Preference number: 3 (lower is better)
Translates to: GEGVASFRDVSSLKCEGELTSSV*SWKTWK
Trigger: CTTCCAAGTCTTCCAAGACAAAACCGAAGAAGTTAG...TTCTCCTTCGCACTTGAGTGAACTCACATCTCTAAAAGAAGCTACTCCTTCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR-3UTR CAA 90 bp TCCTCGCTCTCAAAGAAATCACTGCTACTTCTATGGTTGTCACTTTCAGATTCTAGGTGGCCCTTCCAGTaGAGGCATCTCCTTAGATTT +
Preference number: 3 (lower is better)
Translates to: SSLSKKSLLLLWLSLSDSRWPFQ*RHLLRF
Trigger: AAATCTAAGGAGATGCCTCAACTGGAAGGGCCACCT...AGAATCTGAAAGTGACAACCATAGAAGTAGCAGTGATTTCTTTGAGAGCGAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR-3UTR CAA 90 bp TTGGAGAACTTTCTGAACAGTCAATCTGTAAAGGTGTCTGCAATCCCAAGGCCACTTTCAGATTCTAGCTaGCTTGGACTTTCAGTGGCA +
Preference number: 3 (lower is better)
Translates to: LENFLNSQSVKVSAIPRPLSDSS*LGLSVA
Trigger: TGCCACTGAAAGTCCAAGCAAGCTAGAATCTGAAAG...TGGCCTTGGGATTGCAGACACCTTTACAGATTGACTGTTCAGAAAGTTCTCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR-3UTR CAA 90 bp GCCGATTTAGTGAAGTGTCCTGTGCAGAAAAGAGTCCAGGGCTGTCAGTTAATTATGTGGCAGCAAGACTaGATACCGTATTATGGAGTT +
Preference number: 3 (lower is better)
Translates to: ADLVKCPVQKRVQGCQLIMWQQD*IPYYGV
Trigger: AACTCCATAATACGGTATCAAGTCTTGCTGCCACAT...AATTAACTGACAGCCCTGGACTCTTTTCTGCACAGGACACTTCACTAAATCGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR-3UTR CAA 90 bp GCTTCTTTTAGAGATGTGAGTTCACTCAAGTGCGAAGGAGAATTTGGCAACAAATGCCTGTTGAGCTGTTaGCTCAAGAACAGCAAGGCT +
Preference number: 3 (lower is better)
Translates to: ASFRDVSSLKCEGEFGNKCLLSC*LKNSKA
Trigger: AGCCTTGCTGTTCTTGAGCAAACAGCTCAACAGGCA...TTTGTTGCCAAATTCTCCTTCGCACTTGAGTGAACTCACATCTCTAAAAGAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR-3UTR CAA 90 bp ATGAAAGTTATAATCATAAGTGAGTTCAGTCCCAGCTGGCATGTCTTTAAGAGCCTCTTGGTCCTCATTTaGTACCATCCGCTGCAGCAG +
Preference number: 3 (lower is better)
Translates to: MKVIIISEFSPSWHVFKSLLVLI*YHPLQQ
Trigger: CTGCTGCAGCGGATGGTACAAAATGAGGACCAAGAG...GCTCTTAAAGACATGCCAGCTGGGACTGAACTCACTTATGATTATAACTTTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CAA 90 bp ATGAAAGTTATAATCATAAGTGAGTTCAGTCCCAGCTGGCATGTCTTTAAGAGCCCTGGAATGCTTGCATaGATACGACAGCCTGAAGGG +
Preference number: 3 (lower is better)
Translates to: MKVIIISEFSPSWHVFKSPGMLA*IRQPEG
Trigger: CCCTTCAGGCTGTCGTATCAATGCAAGCATTCCAGG...GCTCTTAAAGACATGCCAGCTGGGACTGAACTCACTTATGATTATAACTTTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CAA 90 bp GGGCATTGTAATAGGCCTTTCGTAGACGACAAACATCTCTCCCAACTGGGGATTGCCACACTTACAAAGTaGCTGTTTTTCCACATTGAA +
Preference number: 3 (lower is better)
Translates to: GHCNRPFVDDKHLSQLGIATLTK*LFFHIE
Trigger: TTCAATGTGGAAAAACAGCAACTTTGTAAGTGTGGC...AATCCCCAGTTGGGAGAGATGTTTGTCGTCTACGAAAGGCCTATTACAATGCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR TCA 72 bp TTGGCCCAATTTAGAGCCAAATGTGGCAGCAAGACTTaGTACCGTATTATGGAGTTTGGATTGCACTTTCCC +
Preference number: 3 (lower is better)
Translates to: LAQFRAKCGSKT*YRIMEFGLHFP
Trigger: GGGAAAGTGCAATCCAAACTCCATAATACGGTATCAAGTCTTGCTGCCACATTTGGCTCTAAATTGGGCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR TCA 72 bp CCAATTCCACTATCACTGGGAATGGTCTCATCACTATaGGACTCACTGATTGGGGAAGGAGTAGCTTCTTTT +
Preference number: 3 (lower is better)
Translates to: PIPLSLGMVSSL*DSLIGEGVASF
Trigger: AAAAGAAGCTACTCCTTCCCCAATCAGTGAGTCTCATAGTGATGAGACCATTCCCAGTGATAGTGGAATTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR TCA 72 bp ATAGGAGTGAGATGCTATTATTGCAAGAGTCACTTGTaGCTGCAGGCACTAAAAGGCTGTCTGGTTTTCCCA +
Preference number: 3 (lower is better)
Translates to: IGVRCYYCKSHL*LQALKGCLVFP
Trigger: TGGGAAAACCAGACAGCCTTTTAGTGCCTGCAGTCACAAGTGACTCTTGCAATAATAGCATCTCACTCCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR GCA 72 bp CAGCCTACAGACATGCAGACTAACTCTGTATCTATTTaGAGTGATGTAGTGCTTTGCCCCGCATTTCAAACA +
Preference number: 3 (lower is better)
Translates to: QPTDMQTNSVSI*SDVVLCPAFQT
Trigger: TGTTTGAAATGCGGGGCAAAGCACTACATCACTGCAAATAGATACAGAGTTAGTCTGCATGTCTGTAGGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR GCA 72 bp TGCTACTTCTATGGTTGTCACTTTCAGATTCTAGCTTaGTTGGACTTTCAGTGGCAACAAATGGAGCCACTG +
Preference number: 3 (lower is better)
Translates to: CYFYGCHFQILA*LDFQWQQMEPL
Trigger: CAGTGGCTCCATTTGTTGCCACTGAAAGTCCAAGCAAGCTAGAATCTGAAAGTGACAACCATAGAAGTAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR GCA 72 bp TTGAGGCCTTCTTCATTGCAAGAGTCTGAATCATACTaGCCTGTCTGGAGTGTAAATGCAAATATGGCACTG +
Preference number: 3 (lower is better)
Translates to: LRPSSLQESESY*PVWSVNANMAL
Trigger: CAGTGCCATATTTGCATTTACACTCCAGACAGGGCAGTATGATTCAGACTCTTGCAATGAAGAAGGCCTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR CCA 72 bp GAGAGCAAGAGATGGAGCTGTGGATTTGCTCAACTTTaGCAATCGGCGTTTAAGGAAGTCATGATCTACAAA +
Preference number: 3 (lower is better)
Translates to: ESKRWSCGFAQL*QSAFKEVMIYK
Trigger: TTTGTAGATCATGACTTCCTTAAACGCCGATTGCCAAAGTTGAGCAAATCCACAGCTCCATCTCTTGCTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR-3UTR CAA 90 bp CAGATGTACACATCTTGCTCCTTTACTCCTTTGGGTCTCCCTTTACAATACGTATTTACTTTGACCTGGTaGGGCAAGAAAGGAGAGACA +
Preference number: 3 (lower is better)
Translates to: QMYTSCSFTPLGLPLQYVFTLTW*GKKGET
Trigger: TGTCTCTCCTTTCTTGCCCAACCAGGTCAAAGTAAA...TACGTATTGTAAAGGGAGACCCAAAGGAGTAAAGGAGCAAGATGTGTACATCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CAA 90 bp AACAAAAGAAACCACTCAAACGGGCTTGGACATGCGATTTTTCCAGCTCCACATGCAGTTACAAGTGCTTaGAGCTGTCAACTCACATTT +
Preference number: 3 (lower is better)
Translates to: NKRNHSNGLGHAIFPAPHAVTSA*SCQLTF
Trigger: AAATGTGAGTTGACAGCTCAAAGCACTTGTAACTGC...ATGTGGAGCTGGAAAAATCGCATGTCCAAGCCCGTTTGAGTGGTTTCTTTTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR CAA 90 bp TATATTAGCAGCATTTATATTTTCCGCAATCACACAGCCTACAGACATGCAGACTCCCATGATTCCATTTaGGGGAGTAGAGGTAGGGAG +
Preference number: 3 (lower is better)
Translates to: YISSIYIFRNHTAYRHADSHDSI*GSRGRE
Trigger: CTCCCTACCTCTACTCCCCAAAATGGAATCATGGGA...GTCTGCATGTCTGTAGGCTGTGTGATTGCGGAAAATATAAATGCTGCTAATATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR CAA 90 bp GGGCATTGTAATAGGCCTTTCGTAGACGACAAACATCTCTCCCAACTGGGGATTGGGACATGTTTACTATaGTATTGCTTACCAATCACA +
Preference number: 3 (lower is better)
Translates to: GHCNRPFVDDKHLSQLGIGTCLL*YCLPIT
Trigger: TGTGATTGGTAAGCAATACAATAGTAAACATGTCCC...AATCCCCAGTTGGGAGAGATGTTTGTCGTCTACGAAAGGCCTATTACAATGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CAA 90 bp AATGGGGATTTAGCGGTAGATACATCAGAAGCACCTCCCATTTTAAAGTCCGGAGCTGCTTTTCATGCTTaGAGGTTTCATAAGATCCCT +
Preference number: 3 (lower is better)
Translates to: NGDLAVDTSEAPPILKSGAAFHA*RFHKIP
Trigger: AGGGATCTTATGAAACCTCAAAGCATGAAAAGCAGC...TCCGGACTTTAAAATGGGAGGTGCTTCTGATGTATCTACCGCTAAATCCCCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR-3UTR CAA 90 bp TTCCCTAGTCAGGTATCTAGGAAGAAGCCTCAGCTACTGTTTCTGTTTAAGGTCGGTCTAGGTTTTTCTTaGTGGCCAAGATTTTGTCGT +
Preference number: 3 (lower is better)
Translates to: FPSQVSRKKPQLLFLFKVGLGFS*WPRFCR
Trigger: ACGACAAAATCTTGGCCACAAAGAAAAACCTAGACC...GACCTTAAACAGAAACAGTAGCTGAGGCTTCTTCCTAGATACCTGACTAGGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CAA 90 bp AGACAAACTTCCCTAGTCAGGTATCTAGGAAGAAGCCTCAGCTACTGTTTCTGTGAACTCCGTTTACTGTaGAAGAAGTACTCTCAGATG +
Preference number: 3 (lower is better)
Translates to: RQTSLVRYLGRSLSYCFCELRLL*KKYSQM
Trigger: CATCTGAGAGTACTTCTTCAACAGTAAACGGAGTTC...ACAGAAACAGTAGCTGAGGCTTCTTCCTAGATACCTGACTAGGGAAGTTTGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676814.1
3UTR TCA 72 bp TGGCAATCGGCGTTTAAGGAAGTCATGATCTACAAATaGAGGGGGTCCAATGTTTTTCATAAACTTGGCTGG +
Preference number: 3 (lower is better)
Translates to: WQSAFKEVMIYK*RGSNVFHKLGW
Trigger: CCAGCCAAGTTTATGAAAAACATTGGACCCCCTTCATTTGTAGATCATGACTTCCTTAAACGCCGATTGCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR TCA 72 bp TACGCCCATAGTACTTCTCAGCATTCCGAAAGACTTTaGGCATGTCAGCATCAAAAGCTTCCACTGTCTTAT +
Preference number: 3 (lower is better)
Translates to: YAHSTSQHSERL*ACQHQKLPLSY
Trigger: ATAAGACAGTGGAAGCTTTTGATGCTGACATGCTCAAAGTCTTTCGGAATGCTGAGAAGTACTATGGGCGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR CCA 72 bp TCTTCATTGCAAGAGTCTGAATCATACTGCCCTGTCTaGAGTGTAAATGCAAATATGGCACTGAACTGGGTT +
Preference number: 3 (lower is better)
Translates to: SSLQESESYCPV*SVNANMALNWV
Trigger: AACCCAGTTCAGTGCCATATTTGCATTTACACTCCAGACAGGGCAGTATGATTCAGACTCTTGCAATGAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR-3UTR CAA 90 bp TATATTAGCAGCATTTATATTTTCCGCAATCACACAGCCTACAGACATGCAGACCTGGATCCCAGATGCTaGAGGTTCTCATTCTTTGAG +
Preference number: 3 (lower is better)
Translates to: YISSIYIFRNHTAYRHADLDPRC*RFSFFE
Trigger: CTCAAAGAATGAGAACCTCAAGCATCTGGGATCCAG...GTCTGCATGTCTGTAGGCTGTGTGATTGCGGAAAATATAAATGCTGCTAATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR CAA 90 bp TATATTAGCAGCATTTATATTTTCCGCAATCACACAGCCTACAGACATGCAGACCCTGGCCCTATCCCTTaGGATTTTGAGTTATACCTG +
Preference number: 3 (lower is better)
Translates to: YISSIYIFRNHTAYRHADPGPIP*DFELYL
Trigger: CAGGTATAACTCAAAATCCAAAGGGATAGGGCCAGG...GTCTGCATGTCTGTAGGCTGTGTGATTGCGGAAAATATAAATGCTGCTAATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR CAA 90 bp AAGAGACAGTATAGTCTGTTAACTTCTGGTCAAGAGAGTAGGAAGGAAGGAGACGCAGTTACAAGTGCTTaGAGCTGTCAACTCACATTT +
Preference number: 3 (lower is better)
Translates to: KRQYSLLTSGQESRKEGDAVTSA*SCQLTF
Trigger: AAATGTGAGTTGACAGCTCAAAGCACTTGTAACTGC...GTCTCCTTCCTTCCTACTCTCTTGACCAGAAGTTAACAGACTATACTGTCTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR CAA 90 bp ACGAGTCAGAGCATCGTCACCATAAGGGGAAATGTACAATTAGGACAGCATTGGGGGACATGTTTACTATaGTATTGCTTACCAATCACA +
Preference number: 3 (lower is better)
Translates to: TSQSIVTIRGNVQLGQHWGTCLL*YCLPIT
Trigger: TGTGATTGGTAAGCAATACAATAGTAAACATGTCCC...CCAATGCTGTCCTAATTGTACATTTCCCCTTATGGTGACGATGCTCTGACTCGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR CAA 90 bp GACATGCAGACTAACTCTGTATCTATTTGCAGTGATGTAGTGCTTTGCCCCGCAGGGACATGTTTACTATaGTATTGCTTACCAATCACA +
Preference number: 3 (lower is better)
Translates to: DMQTNSVSICSDVVLCPAGTCLL*YCLPIT
Trigger: TGTGATTGGTAAGCAATACAATAGTAAACATGTCCC...TGCGGGGCAAAGCACTACATCACTGCAAATAGATACAGAGTTAGTCTGCATGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR CAA 90 bp AAACGGGCTTGGACATGCGATTTTTCCAGCTCCACATGTGAGTATCTTATACCCGGGACATGTTTACTATaGTATTGCTTACCAATCACA +
Preference number: 3 (lower is better)
Translates to: KRAWTCDFSSSTCEYLIPGTCLL*YCLPIT
Trigger: TGTGATTGGTAAGCAATACAATAGTAAACATGTCCC...GGGTATAAGATACTCACATGTGGAGCTGGAAAAATCGCATGTCCAAGCCCGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR CAA 90 bp TCCCTCCTCTCTACATTATTAACCCTTAAGGTGAAGCAATGGAGAAGAAAATTAACCACTCAAACGGGCTaGGACATGCGATTTTTCCAG +
Preference number: 3 (lower is better)
Translates to: SLLSTLLTLKVKQWRRKLTTQTG*DMRFFQ
Trigger: CTGGAAAAATCGCATGTCCAAGCCCGTTTGAGTGGT...TAATTTTCTTCTCCATTGCTTCACCTTAAGGGTTAATAATGTAGAGAGGAGGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR GCA 72 bp GATCCTGAAGTTGATCCTCGCTCTCAAAGAAATCACTaGTACTTCTATGGTTGTCACTTTCAGATTCTAGCT +
Preference number: 3 (lower is better)
Translates to: DPEVDPRSQRNH*YFYGCHFQILA
Trigger: AGCTAGAATCTGAAAGTGACAACCATAGAAGTAGCAGTGATTTCTTTGAGAGCGAGGATCAACTTCAGGATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR GCA 72 bp CTGGTTGTAAGAAAGGCCTCCTGTCGAAGTAGCTTATaGTTTTTCTTATGGTATTTGGCAGGATTGAGAAGT +
Preference number: 3 (lower is better)
Translates to: LVVRKASCRSSL*FFLWYLAGLRS
Trigger: ACTTCTCAATCCTGCCAAATACCATAAGAAAAAGCATAAGCTACTTCGACAGGAGGCCTTTCTTACAACCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR CCA 72 bp GTCCTTATTGACCAATCCTACTGCTGCATTAAACACTaGCTTTTTCCCAGGATCTTTAGTTACCAATCCAAC +
Preference number: 3 (lower is better)
Translates to: VLIDQSYCCIKH*LFPRIFSYQSN
Trigger: GTTGGATTGGTAACTAAAGATCCTGGGAAAAAGCCAGTGTTTAATGCAGCAGTAGGATTGGTCAATAAGGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR-3UTR CAA 90 bp TGTATTGCTTACCAATCACACAGCAGGTGTGTGTGTGTGTGTGTATATATATACTTTACTTTGACCTGGTaGGGCAAGAAAGGAGAGACA +
Preference number: 3 (lower is better)
Translates to: CIAYQSHSRCVCVCVYIYFTLTW*GKKGET
Trigger: TGTCTCTCCTTTCTTGCCCAACCAGGTCAAAGTAAA...GTATATATATACACACACACACACACACCTGCTGTGTGATTGGTAAGCAATACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR CAA 90 bp CCCATAGTACTTCTCAGCATTCCGAAAGACTTTGAGCATGTCAGCATCAAAAGCGGGACATGTTTACTATaGTATTGCTTACCAATCACA +
Preference number: 3 (lower is better)
Translates to: PIVLLSIPKDFEHVSIKSGTCLL*YCLPIT
Trigger: TGTGATTGGTAAGCAATACAATAGTAAACATGTCCC...GCTTTTGATGCTGACATGCTCAAAGTCTTTCGGAATGCTGAGAAGTACTATGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CAA 90 bp CAGTTGAGGCATCTCCTTAGATTTAGGCCTTCCTCTTTTGGGCTTATAAATATCACATCATCTGCTTTCTaGTACAACTTTGAAGGGTCG +
Preference number: 3 (lower is better)
Translates to: QLRHLLRFRPSSFGLINITSSAF*YNFEGS
Trigger: CGACCCTTCAAAGTTGTACAAGAAAGCAGATGATGT...GATATTTATAAGCCCAAAAGAGGAAGGCCTAAATCTAAGGAGATGCCTCAACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR-3UTR CAA 90 bp AAGAGACAGTATAGTCTGTTAACTTCTGGTCAAGAGAGTAGGAAGGAAGGAGACAGTGAGATGCTATTATaGCAAGAGTCACTTGTGACT +
Preference number: 3 (lower is better)
Translates to: KRQYSLLTSGQESRKEGDSEMLL*QESLVT
Trigger: AGTCACAAGTGACTCTTGCAATAATAGCATCTCACT...GTCTCCTTCCTTCCTACTCTCTTGACCAGAAGTTAACAGACTATACTGTCTCTT
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CAA 90 bp TATATTAGCAGCATTTATATTTTCCGCAATCACACAGCCTACAGACATGCAGACGCAGTTACAAGTGCTTaGAGCTGTCAACTCACATTT +
Preference number: 3 (lower is better)
Translates to: YISSIYIFRNHTAYRHADAVTSA*SCQLTF
Trigger: AAATGTGAGTTGACAGCTCAAAGCACTTGTAACTGC...GTCTGCATGTCTGTAGGCTGTGTGATTGCGGAAAATATAAATGCTGCTAATATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR-3UTR CAA 90 bp GCTTCTTTTAGAGATGTGAGTTCACTCAAGTGCGAAGGAGAATTTGGCAACAAATTCTTTCCTGAATCTTaGCTTAGCAGTCCTACTGTA +
Preference number: 3 (lower is better)
Translates to: ASFRDVSSLKCEGEFGNKFFPES*LSSPTV
Trigger: TACAGTAGGACTGCTAAGCAAAGATTCAGGAAAGAA...TTTGTTGCCAAATTCTCCTTCGCACTTGAGTGAACTCACATCTCTAAAAGAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR-3UTR CAA 90 bp TTTCATCTTGTCATAGCTGAGGTAATCATGATTCCTGCGCTTACATTTGTGTTTATCTGGATCCTGAAGTaGATCCTCGCTCTCAAAGAA +
Preference number: 3 (lower is better)
Translates to: FHLVIAEVIMIPALTFVFIWILK*ILALKE
Trigger: TTCTTTGAGAGCGAGGATCAACTTCAGGATCCAGAT...AAACACAAATGTAAGCGCAGGAATCATGATTACCTCAGCTATGACAAGATGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR TCA 72 bp TTGCTCAACTTTGGCAATCGGCGTTTAAGGAAGTCATaGTCTACAAATGAAGGGGGTCCAATGTTTTTCATA +
Preference number: 3 (lower is better)
Translates to: LLNFGNRRLRKS*STNEGGPMFFI
Trigger: TATGAAAAACATTGGACCCCCTTCATTTGTAGATCATGACTTCCTTAAACGCCGATTGCCAAAGTTGAGCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR CCA 72 bp ATGAAAGTTATAATCATAAGTGAGTTCAGTCCCAGCTaGCATGTCTTTAAGAGCATAGAGTCCAATCCGGTA +
Preference number: 3 (lower is better)
Translates to: MKVIIISEFSPS*HVFKSIESNPV
Trigger: TACCGGATTGGACTCTATGCTCTTAAAGACATGCCAGCTGGGACTGAACTCACTTATGATTATAACTTTCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
3UTR-3UTR CAA 90 bp TCCCTCCTCTCTACATTATTAACCCTTAAGGTGAAGCAATGGAGAAGAAAATTAGCAGTTACAAGTGCTTaGAGCTGTCAACTCACATTT +
Preference number: 3 (lower is better)
Translates to: SLLSTLLTLKVKQWRRKLAVTSA*SCQLTF
Trigger: AAATGTGAGTTGACAGCTCAAAGCACTTGTAACTGC...TAATTTTCTTCTCCATTGCTTCACCTTAAGGGTTAATAATGTAGAGAGGAGGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
3UTR TCA 72 bp AGTAGATGGCGTTGCATTAATATAATCTGCCATTTCTaGGTGTACTGGAGACAGCTTCTTAGACAAAGGATT +
Preference number: 3 (lower is better)
Translates to: SRWRCINIICHF*VYWRQLLRQRI
Trigger: AATCCTTTGTCTAAGAAGCTGTCTCCAGTACACTCAGAAATGGCAGATTATATTAATGCAACGCCATCTACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR TCA 72 bp AATCCCTTTACATTCAATACTTATACTATGACCAACTaGCCTATGACCAACGTTCAAGTGGGTACTTTCAGA +
Preference number: 3 (lower is better)
Translates to: NPFTFNTYTMTN*PMTNVQVGTFR
Trigger: TCTGAAAGTACCCACTTGAACGTTGGTCATAGGTCAGTTGGTCATAGTATAAGTATTGAATGTAAAGGGATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR CCA 72 bp TGTATAGAAACTATTAAAGTTGATTCGAAAGATAGTTaGCAGAAGATCTCGGGGGATAAAATGATGACTTCG +
Preference number: 3 (lower is better)
Translates to: CIETIKVDSKDS*QKISGDKMMTS
Trigger: CGAAGTCATCATTTTATCCCCCGAGATCTTCTGCCAACTATCTTTCGAATCAACTTTAATAGTTTCTATACA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548830.2
3UTR GCA 72 bp GAGTATCTTATACCCAGGTCTCTTAGTAATGTACAGTaGTTCTCTACAGTAAGAAAATACTCCAAACTATTT +
Preference number: 3 (lower is better)
Translates to: EYLIPRSLSNVQ*FSTVRKYSKLF
Trigger: AAATAGTTTGGAGTATTTTCTTACTGTAGAGAAGCACTGTACATTACTAAGAGACCTGGGTATAAGATACTC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
CDS-3UTR CCA 90 bp TCGATAGGACTGACGGACCGGGTGGCCATCAGGGGTGCGCCGACTATCCCTCATGCAGAGTGGCGGCGGTaGCGGCGGCAGCTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: SIGLTDRVAIRGAPTIPHAEWRR*RRQLLQ
Trigger: CTGGAGGAGCTGCCGCCGCCACCGCCGCCACTCTGC...ATGAGGGATAGTCGGCGCACCCCTGATGGCCACCCGGTCCGTCAGTCCTATCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676814.1
CDS-3UTR CCA 90 bp GATAGGACTGACGGACCGGGTGGCCATCAGGGGTGCGCCGACTATCCCTCATCAGGGGCCGAGGGATCATaGGAACCTCCCTGTCCACAG +
Preference number: 4 (lower is better)
Translates to: DRTDGPGGHQGCADYPSSGAEGS*EPPCPQ
Trigger: CTGTGGACAGGGAGGTTCCCATGATCCCTCGGCCCC...TGATGAGGGATAGTCGGCGCACCCCTGATGGCCACCCGGTCCGTCAGTCCTATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
CDS-3UTR TCA 90 bp CTAATGTCAACAACATGGCCCCATTCCCCTTGCCCAGATGGACCCTTCCCACCCCTAAAGGGGGCAAACTaGGGGGAGGCGGGTCCCGCA +
Preference number: 4 (lower is better)
Translates to: LMSTTWPHSPCPDGPFPPLKGAN*GEAGPA
Trigger: TGCGGGACCCGCCTCCCCTCAGTTTGCCCCCTTTAG...GGGTGGGAAGGGTCCATCTGGGCAAGGGGAATGGGGCCATGTTGTTGACATTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 3 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
CDS-3UTR TCA 90 bp TCGATAGGACTGACGGACCGGGTGGCCATCAGGGGTGCGCCGACTATCCCTCATAGCAGGAGGCAGGACTaGTTAGCTCCACTGGATCCC +
Preference number: 4 (lower is better)
Translates to: SIGLTDRVAIRGAPTIPHSRRQD*LAPLDP
Trigger: GGGATCCAGTGGAGCTAATCAGTCCTGCCTCCTGCT...ATGAGGGATAGTCGGCGCACCCCTGATGGCCACCCGGTCCGTCAGTCCTATCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
CDS-3UTR TCA 90 bp ACACACAAGAACTACAGCGCATTAAAAACAGCATGTGTGCTGGCGGGGGCCTGGGGCCAGCGGGTAAGCTaGCTCCCTGGGCTCCTCGCC +
Preference number: 4 (lower is better)
Translates to: THKNYSALKTACVLAGAWGQRVS*LPGLLA
Trigger: GGCGAGGAGCCCAGGGAGTCAGCTTACCCGCTGGCC...CCAGGCCCCCGCCAGCACACATGCTGTTTTTAATGCGCTGTAGTTCTTGTGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000679097.1
CDS-3UTR GCA 90 bp GTCGATAGGACTGACGGACCGGGTGGCCATCAGGGGTGCGCCGACTATCCCTCAAGGACTGAGGTGCAGTaGTGCTCCTTCCTCGTCTCT +
Preference number: 4 (lower is better)
Translates to: VDRTDGPGGHQGCADYPSRTEVQ*CSFLVS
Trigger: AGAGACGAGGAAGGAGCAGCACTGCACCTCAGTCCT...TGAGGGATAGTCGGCGCACCCCTGATGGCCACCCGGTCCGTCAGTCCTATCGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
CDS-3UTR GCA 90 bp CCGGGTGGCCATCAGGGGTGCGCCGACTATCCCTCATCAGATACACACAGTCACGGTGGCCATCAGGGGTaGGCCGACTATCCCTCATCA +
Preference number: 4 (lower is better)
Translates to: PGGHQGCADYPSSDTHSHGGHQG*ADYPSS
Trigger: TGATGAGGGATAGTCGGCGCACCCCTGATGGCCACC...GTGACTGTGTGTATCTGATGAGGGATAGTCGGCGCACCCCTGATGGCCACCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000492987.2
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
CDS-3UTR CCA 90 bp GTAGACACAGCCAGGTTGGGCATAGTGGGGCCGAGGGATCATGGGAACCTCCCTCGACGGGATGGAGAGTaGTGTGTTTCGTGGGGACGG +
Preference number: 4 (lower is better)
Translates to: VDTARLGIVGPRDHGNLPRRDGE*CVSWGR
Trigger: CCGTCCCCACGAAACACACCACTCTCCATCCCGTCG...AGGGAGGTTCCCATGATCCCTCGGCCCCACTATGCCCAACCTGGCTGTGTCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
CDS-3UTR GCA 90 bp CTAATGTCAACAACATGGCCCCATTCCCCTTGCCCAGATGGACCCTTCCCACCCCCAGGGTTCGGTCCTTaGTGTGGCTACGGCCTGGAC +
Preference number: 4 (lower is better)
Translates to: LMSTTWPHSPCPDGPFPPPGFGP*CGYGLD
Trigger: GTCCAGGCCGTAGCCACAGCAAGGACCGAACCCTGG...GGGTGGGAAGGGTCCATCTGGGCAAGGGGAATGGGGCCATGTTGTTGACATTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
CDS-3UTR GCA 90 bp GACCGGGTGGCCATCAGGGGTGCGCCGACTATCCCTCATCAGATACACACAGTCGTGTCAGGACTGAGGTaGAGTGCTGCTCCTTCCTCG +
Preference number: 4 (lower is better)
Translates to: DRVAIRGAPTIPHQIHTVVSGLR*SAAPSS
Trigger: CGAGGAAGGAGCAGCACTGCACCTCAGTCCTGACAC...GACTGTGTGTATCTGATGAGGGATAGTCGGCGCACCCCTGATGGCCACCCGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
CDS-3UTR CCA 90 bp TCGATAGGACTGACGGACCGGGTGGCCATCAGGGGTGCGCCGACTATCCCTCATTGTGTGGCCATGGGCTaGCTGTTTTTGCTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: SIGLTDRVAIRGAPTIPHCVAMG*LFLLLV
Trigger: CACCAGCAGCAAAAACAGCCAGCCCATGGCCACACA...ATGAGGGATAGTCGGCGCACCCCTGATGGCCACCCGGTCCGTCAGTCCTATCGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
CDS-3UTR TCA 90 bp CACAGCCAGGTTGGGCATAGTGGGGCCGAGGGATCATGGGAACCTCCCTGTCCAGCTCAGAGTTGGGAGTaGATCCTCCAAGGGATAAGC +
Preference number: 4 (lower is better)
Translates to: HSQVGHSGAEGSWEPPCPAQSWE*ILQGIS
Trigger: GCTTATCCCTTGGAGGATTCACTCCCAACTCTGAGC...TGGACAGGGAGGTTCCCATGATCCCTCGGCCCCACTATGCCCAACCTGGCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
CDS-3UTR TCA 90 bp AGACACAGCCAGGTTGGGCATAGTGGGGCCGAGGGATCATGGGAACCTCCTGAGCTCATCAATCTGGGCTaGTGCCTCATGCCGGGCATT +
Preference number: 4 (lower is better)
Translates to: RHSQVGHSGAEGSWEPPELINLG*CLMPGI
Trigger: AATGCCCGGCATGAGGCATCAGCCCAGATTGATGAG...CTCAGGAGGTTCCCATGATCCCTCGGCCCCACTATGCCCAACCTGGCTGTGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492987.2
CDS-3UTR TCA 90 bp TGTGAGATAACAGTCGATAGGACTGACGGACCGGGTGGCCATCAGGGGTGCGCCCTCATCAATCTGGGCTaGTGCCTCATGCCGGGCATT +
Preference number: 4 (lower is better)
Translates to: CEITVDRTDGPGGHQGCALINLG*CLMPGI
Trigger: AATGCCCGGCATGAGGCATCAGCCCAGATTGATGAG...GGCGCACCCCTGATGGCCACCCGGTCCGTCAGTCCTATCGACTGTTATCTCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000492987.2
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
CDS-3UTR TCA 90 bp ACTGACGGACCGGGTGGCCATCAGGGGTGCGCCGACTATCCCTCATCAGATACACTCATCAATCTGGGCTaGTGCCTCATGCCGGGCATT +
Preference number: 4 (lower is better)
Translates to: TDGPGGHQGCADYPSSDTLINLG*CLMPGI
Trigger: AATGCCCGGCATGAGGCATCAGCCCAGATTGATGAG...TGTATCTGATGAGGGATAGTCGGCGCACCCCTGATGGCCACCCGGTCCGTCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000492987.2
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
CDS-3UTR TCA 90 bp AGGTTGGGCATAGTGGGGCCGAGGGATCATGGGAACCTCCTGAGACTTCAGGTGCTGGTCTCGAACTCCTaGGCTCAGGCAATCCATCCG +
Preference number: 4 (lower is better)
Translates to: RLGIVGPRDHGNLLRLQVLVSNS*AQAIHP
Trigger: CGGATGGATTGCCTGAGCTCAGGAGTTCGAGACCAG...CACCTGAAGTCTCAGGAGGTTCCCATGATCCCTCGGCCCCACTATGCCCAACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492987.2
CDS-3UTR TCA 90 bp GACCGGGTGGCCATCAGGGGTGCGCCGACTATCCCTCATCAGATACACACAGTCATCATGGGAACCTCCTaGGACTTCAGGTGCACGCCT +
Preference number: 4 (lower is better)
Translates to: DRVAIRGAPTIPHQIHTVIMGTS*DFRCTP
Trigger: AGGCGTGCACCTGAAGTCTCAGGAGGTTCCCATGAT...GACTGTGTGTATCTGATGAGGGATAGTCGGCGCACCCCTGATGGCCACCCGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492987.2
CDS-3UTR GCA 90 bp TGTGAGATAACAGTCGATAGGACTGACGGACCGGGTGGCCATCAGGGGTGCGCCCCGGCATGTGCTTCTTaGCACCACTTTAGTCCACCG +
Preference number: 4 (lower is better)
Translates to: CEITVDRTDGPGGHQGCAPACAS*HHFSPP
Trigger: CGGTGGACTAAAGTGGTGGCAAGAAGCACATGCCGG...GGCGCACCCCTGATGGCCACCCGGTCCGTCAGTCCTATCGACTGTTATCTCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
CDS-3UTR GCA 90 bp CACAGCCAGGTTGGGCATAGTGGGGCCGAGGGATCATGGGAACCTCCCTGTCCAACTGGTGACCTCATTTaGCTCTTAGGCCTGCCTCTC +
Preference number: 4 (lower is better)
Translates to: HSQVGHSGAEGSWEPPCPTGDLI*LLGLPL
Trigger: GAGAGGCAGGCCTAAGAGGCAAATGAGGTCACCAGT...TGGACAGGGAGGTTCCCATGATCCCTCGGCCCCACTATGCCCAACCTGGCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
CDS-3UTR GCA 90 bp GAGCAGGAGGCAGGACTGATTAGCTCCACTGGATCCCAGATGCTTGAGGTTCTCCCAGGGTTCGGTCCTTaGTGTGGCTACGGCCTGGAC +
Preference number: 4 (lower is better)
Translates to: EQEAGLISSTGSQMLEVLPGFGP*CGYGLD
Trigger: GTCCAGGCCGTAGCCACAGCAAGGACCGAACCCTGG...GAGAACCTCAAGCATCTGGGATCCAGTGGAGCTAATCAGTCCTGCCTCCTGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
CDS-3UTR GCA 90 bp ACAGATGAAGTAGACACAGCCAGGTTGGGCATAGTGGGGCCGAGGGATCATGGGGGTGGCCATCAGGGGTaGGCCGACTATCCCTCATCA +
Preference number: 4 (lower is better)
Translates to: TDEVDTARLGIVGPRDHGGGHQG*ADYPSS
Trigger: TGATGAGGGATAGTCGGCGCACCCCTGATGGCCACC...CCCATGATCCCTCGGCCCCACTATGCCCAACCTGGCTGTGTCTACTTCATCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000492987.2
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
CDS-3UTR GCA 90 bp CTAATGTCAACAACATGGCCCCATTCCCCTTGCCCAGATGGACCCTTCCCACCCGGTGGCCATCAGGGGTaGGCCGACTATCCCTCATCA +
Preference number: 4 (lower is better)
Translates to: LMSTTWPHSPCPDGPFPPGGHQG*ADYPSS
Trigger: TGATGAGGGATAGTCGGCGCACCCCTGATGGCCACC...GGGTGGGAAGGGTCCATCTGGGCAAGGGGAATGGGGCCATGTTGTTGACATTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
CDS-3UTR GCA 90 bp CTGTGGCTACGGCCTGGACTGGAAGAAGGTGGTGCAGAGGCAGTTGCAATCACATGGCCCCATTCCCCTTaGCCAGATGGACCCTTCCCA +
Preference number: 4 (lower is better)
Translates to: LWLRPGLEEGGAEAVAITWPHSP*PDGPFP
Trigger: TGGGAAGGGTCCATCTGGGCAAGGGGAATGGGGCCA...TGTGATTGCAACTGCCTCTGCACCACCTTCTTCCAGTCCAGGCCGTAGCCACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
CDS-3UTR GCA 90 bp CTAATGTCAACAACATGGCCCCATTCCCCTTGCCCAGATGGACCCTTCCCACCCTGGCCCCATTCCCCTTaGCCAGATGGACCCTTCCCA +
Preference number: 4 (lower is better)
Translates to: LMSTTWPHSPCPDGPFPPWPHSP*PDGPFP
Trigger: TGGGAAGGGTCCATCTGGGCAAGGGGAATGGGGCCA...GGGTGGGAAGGGTCCATCTGGGCAAGGGGAATGGGGCCATGTTGTTGACATTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
CDS-3UTR CCA 90 bp AGCACAGCAGACACACAAGAACTACAGCGCATTAAAAACAGCATGTGTGCTGGCGCAGAGTGGCGGCGGTaGCGGCGGCAGCTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: STADTQELQRIKNSMCAGAEWRR*RRQLLQ
Trigger: CTGGAGGAGCTGCCGCCGCCACCGCCGCCACTCTGC...GCCAGCACACATGCTGTTTTTAATGCGCTGTAGTTCTTGTGTGTCTGCTGTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
CDS-3UTR CCA 90 bp GTCAGGTATCTAGGAAGAAGCCTCAGCTACTGTTTCTGTTTAAGGTCTCTGGGGGCAGAGTGGCGGCGGTaGCGGCGGCAGCTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: VRYLGRSLSYCFCLRSLGAEWRR*RRQLLQ
Trigger: CTGGAGGAGCTGCCGCCGCCACCGCCGCCACTCTGC...CCCCAGAGACCTTAAACAGAAACAGTAGCTGAGGCTTCTTCCTAGATACCTGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
CDS-3UTR CCA 90 bp CCGGGTGGCCATCAGGGGTGCGCCGACTATCCCTCATCAGATACACACAGTCACTGGGGTAGGTACTCATaGAAAGGAGGGGAGTCCTGC +
Preference number: 4 (lower is better)
Translates to: PGGHQGCADYPSSDTHSHWGRYS*KGGESC
Trigger: GCAGGACTCCCCTCCTTTCCATGAGTACCTACCCCA...GTGACTGTGTGTATCTGATGAGGGATAGTCGGCGCACCCCTGATGGCCACCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
CDS-3UTR CCA 90 bp CTAATGTCAACAACATGGCCCCATTCCCCTTGCCCAGATGGACCCTTCCCACCCGGCTACGGCCTGGACTaGAAGAAGGTGGTGCAGAGG +
Preference number: 4 (lower is better)
Translates to: LMSTTWPHSPCPDGPFPPGYGLD*KKVVQR
Trigger: CCTCTGCACCACCTTCTTCCAGTCCAGGCCGTAGCC...GGGTGGGAAGGGTCCATCTGGGCAAGGGGAATGGGGCCATGTTGTTGACATTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
CDS-3UTR CCA 90 bp GTGGCCATCAGGGGTGCGCCGACTATCCCTCATCAGATACACACAGTCACCCTGGTTCGGTCCTTGCTGTaGCTACGGCCTGGACTGGAA +
Preference number: 4 (lower is better)
Translates to: VAIRGAPTIPHQIHTVTLVRSLL*LRPGLE
Trigger: TTCCAGTCCAGGCCGTAGCCACAGCAAGGACCGAAC...CAGGGTGACTGTGTGTATCTGATGAGGGATAGTCGGCGCACCCCTGATGGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
CDS-3UTR CCA 90 bp GCTGTCTGGTTTTCCCAGGGTTCGGTCCTTGCTGTGGCTACGGCCTGGACTGGATGTGTGGCCATGGGCTaGCTGTTTTTGCTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: AVWFSQGSVLAVATAWTGCVAMG*LFLLLV
Trigger: CACCAGCAGCAAAAACAGCCAGCCCATGGCCACACA...TCCAGTCCAGGCCGTAGCCACAGCAAGGACCGAACCCTGGGAAAACCAGACAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
CDS-3UTR CCA 90 bp TGTGAGATAACAGTCGATAGGACTGACGGACCGGGTGGCCATCAGGGGTGCGCCGGGAAGGTTCAAAAGTaGAGCTGCCAGTGCTTGCCG +
Preference number: 4 (lower is better)
Translates to: CEITVDRTDGPGGHQGCAGKVQK*SCQCLP
Trigger: CGGCAAGCACTGGCAGCTCCACTTTTGAACCTTCCC...GGCGCACCCCTGATGGCCACCCGGTCCGTCAGTCCTATCGACTGTTATCTCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
CDS-3UTR CCA 90 bp GAGCAGGAGGCAGGACTGATTAGCTCCACTGGATCCCAGATGCTTGAGGTTCTCGGGGCCGAGGGATCATaGGAACCTCCCTGTCCACAG +
Preference number: 4 (lower is better)
Translates to: EQEAGLISSTGSQMLEVLGAEGS*EPPCPQ
Trigger: CTGTGGACAGGGAGGTTCCCATGATCCCTCGGCCCC...GAGAACCTCAAGCATCTGGGATCCAGTGGAGCTAATCAGTCCTGCCTCCTGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
CDS-3UTR CCA 90 bp CTAATGTCAACAACATGGCCCCATTCCCCTTGCCCAGATGGACCCTTCCCACCCCGACGGGATGGAGAGTaGTGTGTTTCGTGGGGACGG +
Preference number: 4 (lower is better)
Translates to: LMSTTWPHSPCPDGPFPPRRDGE*CVSWGR
Trigger: CCGTCCCCACGAAACACACCACTCTCCATCCCGTCG...GGGTGGGAAGGGTCCATCTGGGCAAGGGGAATGGGGCCATGTTGTTGACATTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
CDS-3UTR CCA 90 bp TCGATAGGACTGACGGACCGGGTGGCCATCAGGGGTGCGCCGACTATCCCTCATGAGGGTGAGGGAAGATaGGCTAGGGGTGAAGAGAAA +
Preference number: 4 (lower is better)
Translates to: SIGLTDRVAIRGAPTIPHEGEGR*ARGEEK
Trigger: TTTCTCTTCACCCCTAGCCCATCTTCCCTCACCCTC...ATGAGGGATAGTCGGCGCACCCCTGATGGCCACCCGGTCCGTCAGTCCTATCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
CDS-3UTR TCA 90 bp GAGCAGGAGGCAGGACTGATTAGCTCCACTGGATCCCAGATGCTTGAGGTTCTCGCCTTAAGCGGTTCCTaGGTGGGGAGCAGTGCTTCG +
Preference number: 4 (lower is better)
Translates to: EQEAGLISSTGSQMLEVLALSGS*VGSSAS
Trigger: CGAAGCACTGCTCCCCACTCAGGAACCGCTTAAGGC...GAGAACCTCAAGCATCTGGGATCCAGTGGAGCTAATCAGTCCTGCCTCCTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
CDS-3UTR TCA 90 bp GTCGATAGGACTGACGGACCGGGTGGCCATCAGGGGTGCGCCGACTATCCCTCACAGACACTTGGCCTATaGCTGTCATCTAGGTCATCT +
Preference number: 4 (lower is better)
Translates to: VDRTDGPGGHQGCADYPSQTLGL*LSSRSS
Trigger: AGATGACCTAGATGACAGTCATAGGCCAAGTGTCTG...TGAGGGATAGTCGGCGCACCCCTGATGGCCACCCGGTCCGTCAGTCCTATCGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
CDS-3UTR TCA 90 bp GCTGTCTGGTTTTCCCAGGGTTCGGTCCTTGCTGTGGCTACGGCCTGGACTGGACTACTTACAGGGCTCTaGCCTCCACTAGTCCCAGAA +
Preference number: 4 (lower is better)
Translates to: AVWFSQGSVLAVATAWTGLLTGL*PPLVPE
Trigger: TTCTGGGACTAGTGGAGGTCAGAGCCCTGTAAGTAG...TCCAGTCCAGGCCGTAGCCACAGCAAGGACCGAACCCTGGGAAAACCAGACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
CDS-3UTR TCA 90 bp CTAATGTCAACAACATGGCCCCATTCCCCTTGCCCAGATGGACCCTTCCCACCCCCGCCTCCTCCCCTTTaGGGCCTTCTTCATTGCAAG +
Preference number: 4 (lower is better)
Translates to: LMSTTWPHSPCPDGPFPPPPPPL*GLLHCK
Trigger: CTTGCAATGAAGAAGGCCTCAAAGGGGAGGAGGCGG...GGGTGGGAAGGGTCCATCTGGGCAAGGGGAATGGGGCCATGTTGTTGACATTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 11 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
CDS-3UTR TCA 90 bp GTAGACACAGCCAGGTTGGGCATAGTGGGGCCGAGGGATCATGGGAACCTCCCTCAATGGACTAGATTCTaGAGGCTCTCGGTGGACCCA +
Preference number: 4 (lower is better)
Translates to: VDTARLGIVGPRDHGNLPQWTRF*RLSVDP
Trigger: TGGGTCCACCGAGAGCCTTCAGAATCTAGTCCATTG...AGGGAGGTTCCCATGATCCCTCGGCCCCACTATGCCCAACCTGGCTGTGTCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
CDS-3UTR TCA 90 bp CACAGCCAGGTTGGGCATAGTGGGGCCGAGGGATCATGGGAACCTCCCTGTCCATCTTTTCCCTTGGGATaGGAGAAAGCACAGGCTGCA +
Preference number: 4 (lower is better)
Translates to: HSQVGHSGAEGSWEPPCPSFPLG*EKAQAA
Trigger: TGCAGCCTGTGCTTTCTCTCATCCCAAGGGAAAAGA...TGGACAGGGAGGTTCCCATGATCCCTCGGCCCCACTATGCCCAACCTGGCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
CDS-3UTR TCA 90 bp GACCGGGTGGCCATCAGGGGTGCGCCGACTATCCCTCATCAGATACACACAGTCCTCCTTTTCAGAGACTaGGGTCTCACTGCTGTCTGC +
Preference number: 4 (lower is better)
Translates to: DRVAIRGAPTIPHQIHTVLLFRD*GLTAVC
Trigger: GCAGACAGCAGTGAGACCTCAGTCTCTGAAAAGGAG...GACTGTGTGTATCTGATGAGGGATAGTCGGCGCACCCCTGATGGCCACCCGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000492987.2
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
CDS-3UTR GCA 90 bp GCTGTCTGGTTTTCCCAGGGTTCGGTCCTTGCTGTGGCTACGGCCTGGACTGGAACTGGTGACCTCATTTaGCTCTTAGGCCTGCCTCTC +
Preference number: 4 (lower is better)
Translates to: AVWFSQGSVLAVATAWTGTGDLI*LLGLPL
Trigger: GAGAGGCAGGCCTAAGAGGCAAATGAGGTCACCAGT...TCCAGTCCAGGCCGTAGCCACAGCAAGGACCGAACCCTGGGAAAACCAGACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
CDS-3UTR GCA 90 bp CTAATGTCAACAACATGGCCCCATTCCCCTTGCCCAGATGGACCCTTCCCACCCGTGTCAGGACTGAGGTaGAGTGCTGCTCCTTCCTCG +
Preference number: 4 (lower is better)
Translates to: LMSTTWPHSPCPDGPFPPVSGLR*SAAPSS
Trigger: CGAGGAAGGAGCAGCACTGCACCTCAGTCCTGACAC...GGGTGGGAAGGGTCCATCTGGGCAAGGGGAATGGGGCCATGTTGTTGACATTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
CDS-3UTR GCA 90 bp GAGCAGGAGGCAGGACTGATTAGCTCCACTGGATCCCAGATGCTTGAGGTTCTCGGTGGCCATCAGGGGTaGGCCGACTATCCCTCATCA +
Preference number: 4 (lower is better)
Translates to: EQEAGLISSTGSQMLEVLGGHQG*ADYPSS
Trigger: TGATGAGGGATAGTCGGCGCACCCCTGATGGCCACC...GAGAACCTCAAGCATCTGGGATCCAGTGGAGCTAATCAGTCCTGCCTCCTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
CDS-3UTR CCA 90 bp TCGATAGGACTGACGGACCGGGTGGCCATCAGGGGTGCGCCGACTATCCCTCATTTCATCACTGCTGGCTaGCTCAGAGTTGGGAGTGAA +
Preference number: 4 (lower is better)
Translates to: SIGLTDRVAIRGAPTIPHFITAG*LRVGSE
Trigger: TTCACTCCCAACTCTGAGCCAGCCAGCAGTGATGAA...ATGAGGGATAGTCGGCGCACCCCTGATGGCCACCCGGTCCGTCAGTCCTATCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
CDS-3UTR CCA 90 bp ACTGACGGACCGGGTGGCCATCAGGGGTGCGCCGACTATCCCTCATCAGATACAGGGTTTATCAGAGGTTaGCTGGGAGCCTGCCAAAGT +
Preference number: 4 (lower is better)
Translates to: TDGPGGHQGCADYPSSDTGFIRG*LGACQS
Trigger: ACTTTGGCAGGCTCCCAGCCAACCTCTGATAAACCC...TGTATCTGATGAGGGATAGTCGGCGCACCCCTGATGGCCACCCGGTCCGTCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677042.1
ENST00000678699.1
CDS-3UTR CCA 90 bp GAGCAGGAGGCAGGACTGATTAGCTCCACTGGATCCCAGATGCTTGAGGTTCTCGCTGTGGCTACGGCCTaGACTGGAAGAAGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: EQEAGLISSTGSQMLEVLAVATA*TGRRWC
Trigger: GCACCACCTTCTTCCAGTCCAGGCCGTAGCCACAGC...GAGAACCTCAAGCATCTGGGATCCAGTGGAGCTAATCAGTCCTGCCTCCTGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
CDS-3UTR CCA 90 bp CCGGGTGGCCATCAGGGGTGCGCCGACTATCCCTCATCAGATACACACAGTCACATTTCTTTGAAGATCTaGGCTAGGCGGGCTGCCCGA +
Preference number: 4 (lower is better)
Translates to: PGGHQGCADYPSSDTHSHISLKI*ARRAAR
Trigger: TCGGGCAGCCCGCCTAGCCCAGATCTTCAAAGAAAT...GTGACTGTGTGTATCTGATGAGGGATAGTCGGCGCACCCCTGATGGCCACCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676814.1
ENST00000677042.1
ENST00000678699.1
CDS-3UTR CCA 90 bp ATACCCAGAGAGCAGGAGGCAGGACTGATTAGCTCCACTGGATCCCAGATGCTTGGGGCCGAGGGATCATaGGAACCTCCCTGTCCACAG +
Preference number: 4 (lower is better)
Translates to: IPREQEAGLISSTGSQMLGAEGS*EPPCPQ
Trigger: CTGTGGACAGGGAGGTTCCCATGATCCCTCGGCCCC...AAGCATCTGGGATCCAGTGGAGCTAATCAGTCCTGCCTCCTGCTCTCTGGGTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
CDS-3UTR CCA 90 bp GAGCAGGAGGCAGGACTGATTAGCTCCACTGGATCCCAGATGCTTGAGGTTCTCCGACGGGATGGAGAGTaGTGTGTTTCGTGGGGACGG +
Preference number: 4 (lower is better)
Translates to: EQEAGLISSTGSQMLEVLRRDGE*CVSWGR
Trigger: CCGTCCCCACGAAACACACCACTCTCCATCCCGTCG...GAGAACCTCAAGCATCTGGGATCCAGTGGAGCTAATCAGTCCTGCCTCCTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000368346.7
ENST00000392403.8
ENST00000676814.1
ENST00000677042.1
ENST00000677213.1
ENST00000677825.1
ENST00000677992.1
ENST00000678117.1
ENST00000678699.1
ENST00000679097.1
ENST00000679133.1
ENST00000679333.1
CDS-3UTR CCA 90 bp GGATCATGGGAACCTCCTGAGACTTCAGGTGCACGCCTCCATGCCCGGCTAATTGGGGCCGAGGGATCATaGGAACCTCCTGAGACTTCA +
Preference number: 4 (lower is better)
Translates to: GSWEPPETSGARLHARLIGAEGS*EPPETS
Trigger: TGAAGTCTCAGGAGGTTCCCATGATCCCTCGGCCCC...AATTAGCCGGGCATGGAGGCGTGCACCTGAAGTCTCAGGAGGTTCCCATGATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492987.2
CDS-3UTR TCA 90 bp AGAACCGACGGGATGGAGAGTGGTGTGTTTCGTGGGGACGGAAATAATGGTGACGCCTTAAGCGGTTCCTaGGTGGGGAGCAGTGCTTCG +
Preference number: 4 (lower is better)
Translates to: RTDGMESGVFRGDGNNGDALSGS*VGSSAS
Trigger: CGAAGCACTGCTCCCCACTCAGGAACCGCTTAAGGC...GTCACCATTATTTCCGTCCCCACGAAACACACCACTCTCCATCCCGTCGGTTCT
57% GC, longes