RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ASGR2 (Homo sapiens)

Ensembl gene IDs: ENSG00000161944

Ensembl transcript IDs: ENST00000254850.11, ENST00000355035.9, ENST00000446679.6, ENST00000450034.7, ENST00000574868.1, ENST00000576487.5

Found 134 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AAGAGGCTGACGATTATAATAATTACAATGAATTACAGAAGGAGGTaGGATCTCAGTCCTCCAGGGTCAGGGACTCTTAAACTACCTCCT +
Preference number: 1 (lower is better)
Translates to: KRLTIIIITMNYRRR*DLSPPGSGTLKLPP
Trigger: AGGAGGTAGTTTAAGAGTCCCTGACCCTGGAGGACTGAGATCCCACCTCCTTCTGTAATTCATTGTAATTATTATAATCGTCAGCCTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254850.11
ENST00000355035.9
3UTR-3UTR CCA 90 bp TGGGATCTCAGTCCTCCAGGGTCAGGGACTCTTAAACTACCTCCTTTCTCTCTTGGCAGGTGTGGGGTATaGGTTAGCCAGAGGTGTGCT +
Preference number: 2 (lower is better)
Translates to: WDLSPPGSGTLKLPPFSLGRCGV*VSQRCA
Trigger: AGCACACCTCTGGCTAACCCATACCCCACACCTGCC...AAGAGAGAAAGGAGGTAGTTTAAGAGTCCCTGACCCTGGAGGACTGAGATCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254850.11
ENST00000355035.9
3UTR-3UTR CCA 90 bp AGCATTTGTTTCTTCTTTCCTACGCCATTGAAGAGGCTGACGATTATAATAATTGGCAGGTGTGGGGTATaGGTTAGCCAGAGGTGTGCT +
Preference number: 2 (lower is better)
Translates to: SICFFFPTPLKRLTIIIIGRCGV*VSQRCA
Trigger: AGCACACCTCTGGCTAACCCATACCCCACACCTGCC...AATTATTATAATCGTCAGCCTCTTCAATGGCGTAGGAAAGAAGAAACAAATGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254850.11
ENST00000355035.9
3UTR-3UTR CCA 90 bp AGCATTTGTTTCTTCTTTCCTACGCCATTGAAGAGGCTGACGATTATAATAATTAATTACAGAAGGAGGTaGGATCTCAGTCCTCCAGGG +
Preference number: 2 (lower is better)
Translates to: SICFFFPTPLKRLTIIIINYRRR*DLSPPG
Trigger: CCCTGGAGGACTGAGATCCCACCTCCTTCTGTAATT...AATTATTATAATCGTCAGCCTCTTCAATGGCGTAGGAAAGAAGAAACAAATGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254850.11
ENST00000355035.9
3UTR CCA 72 bp ACGATTATAATAATTACAATGAATTACAGAAGGAGGTaGGATCTCAGTCCTCCAGGGTCAGGGACTCTTAAA +
Preference number: 3 (lower is better)
Translates to: TIIIITMNYRRR*DLSPPGSGTLK
Trigger: TTTAAGAGTCCCTGACCCTGGAGGACTGAGATCCCACCTCCTTCTGTAATTCATTGTAATTATTATAATCGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254850.11
ENST00000355035.9
CDS-3UTR GCA 90 bp TCAACAGAGAAGCCAGAGCTGGGCAGGTGTGGGGTATGGGTTAGCCAGAGGTGTCTCGGCTTGCAGCTGTaGACTTTGGGACCCAGTCAC +
Preference number: 4 (lower is better)
Translates to: STEKPELGRCGVWVSQRCLGLQL*TLGPSH
Trigger: GTGACTGGGTCCCAAAGTGCACAGCTGCAAGCCGAG...ACACCTCTGGCTAACCCATACCCCACACCTGCCCAGCTCTGGCTTCTCTGTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254850.11
CDS-3UTR CCA 90 bp CTCCAGGGTCAGGGACTCTTAAACTACCTCCTTTCTCTCTTTGCTCAGCTCTTCGAGTGGAGGAGGGGCTaGTCCGGGCAAGGCCTGCAC +
Preference number: 4 (lower is better)
Translates to: LQGQGLLNYLLSLFAQLFEWRRG*SGQGLH
Trigger: GTGCAGGCCTTGCCCGGACCAGCCCCTCCTCCACTC...GAAGAGCTGAGCAAAGAGAGAAAGGAGGTAGTTTAAGAGTCCCTGACCCTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254850.11
CDS-3UTR CCA 90 bp GTCCTCCAGGGTCAGGGACTCTTAAACTACCTCCTTTCTCTCTTTGCTCAGCTCCCCACGCTGCCTCCGTaGGTGCTGATTGCCTGGACC +
Preference number: 4 (lower is better)
Translates to: VLQGQGLLNYLLSLFAQLPTLPP*VLIAWT
Trigger: GGTCCAGGCAATCAGCACCCACGGAGGCAGCGTGGG...GAGCTGAGCAAAGAGAGAAAGGAGGTAGTTTAAGAGTCCCTGACCCTGGAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254850.11
ENST00000355035.9
CDS-3UTR TCA 90 bp TGGGATCTCAGTCCTCCAGGGTCAGGGACTCTTAAACTACCTCCTTTCTCTCTTGAAAGTCCTTGGCCATaGTGGGGCCCGGGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: WDLSPPGSGTLKLPPFSLESPWP*WGPGWS
Trigger: GCTCCAGCCCGGGCCCCATCATGGCCAAGGACTTTC...AAGAGAGAAAGGAGGTAGTTTAAGAGTCCCTGACCCTGGAGGACTGAGATCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254850.11
ENST00000355035.9
CDS-3UTR TCA 90 bp TCAACAGAGAAGCCAGAGCTGGGCAGGTGTGGGGTATGGGTTAGCCAGAGGTGTTCAGGGCAAGCAGACTaGAGCAGACCATGGAGCAGA +
Preference number: 4 (lower is better)
Translates to: STEKPELGRCGVWVSQRCSGQAD*SRPWSR
Trigger: TCTGCTCCATGGTCTGCTTCAGTCTGCTTGCCCTGA...ACACCTCTGGCTAACCCATACCCCACACCTGCCCAGCTCTGGCTTCTCTGTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254850.11
ENST00000355035.9
CDS-3UTR TCA 90 bp TCAACAGAGAAGCCAGAGCTGGGCAGGTGTGGGGTATGGGTTAGCCAGAGGTGTACCCAGTCACACAGATaGCCACCAGCAGCAGGATGT +
Preference number: 4 (lower is better)
Translates to: STEKPELGRCGVWVSQRCTQSHR*PPAAGC
Trigger: ACATCCTGCTGCTGGTGGTCATCTGTGTGACTGGGT...ACACCTCTGGCTAACCCATACCCCACACCTGCCCAGCTCTGGCTTCTCTGTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254850.11
ENST00000355035.9
CDS-3UTR GCA 90 bp TCAACAGAGAAGCCAGAGCTGGGCAGGTGTGGGGTATGGGTTAGCCAGAGGTGTCAGGGCATCGTGATCTaGTTTCAGGTCCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: STEKPELGRCGVWVSQRCQGIVI*FQVLLL
Trigger: CAGCAGCAGGACCTGAAAGCAGATCACGATGCCCTG...ACACCTCTGGCTAACCCATACCCCACACCTGCCCAGCTCTGGCTTCTCTGTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254850.11
ENST00000355035.9
CDS-3UTR GCA 90 bp TCAACAGAGAAGCCAGAGCTGGGCAGGTGTGGGGTATGGGTTAGCCAGAGGTGTAGGTCCACGGGGAAGTaGTTCAGATGGAAGAGCAGG +
Preference number: 4 (lower is better)
Translates to: STEKPELGRCGVWVSQRCRSTGK*FRWKSR
Trigger: CCTGCTCTTCCATCTGAAGCACTTCCCCGTGGACCT...ACACCTCTGGCTAACCCATACCCCACACCTGCCCAGCTCTGGCTTCTCTGTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254850.11
ENST00000355035.9
CDS-3UTR CCA 90 bp AGTCCTCCAGGGTCAGGGACTCTTAAACTACCTCCTTTCTCTCTTTGCTCAGCTGGAGCTGGGCTGGGCTaGGCTGAGGTTGCTCTGAGG +
Preference number: 4 (lower is better)
Translates to: SPPGSGTLKLPPFSLCSAGAGLG*AEVALR
Trigger: CCTCAGAGCAACCTCAGCCCAGCCCAGCCCAGCTCC...AGCTGAGCAAAGAGAGAAAGGAGGTAGTTTAAGAGTCCCTGACCCTGGAGGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254850.11
ENST00000355035.9
CDS-3UTR CCA 90 bp GTCCTCCAGGGTCAGGGACTCTTAAACTACCTCCTTTCTCTCTTTGCTCAGCTCGGGCAGCAGGTCCTTTaGGAGCCGTTGCTGTGGAGG +
Preference number: 4 (lower is better)
Translates to: VLQGQGLLNYLLSLFAQLGQQVL*EPLLWR
Trigger: CCTCCACAGCAACGGCTCCCAAAGGACCTGCTGCCC...GAGCTGAGCAAAGAGAGAAAGGAGGTAGTTTAAGAGTCCCTGACCCTGGAGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254850.11
ENST00000355035.9
CDS-3UTR TCA 90 bp CTCCAGGGTCAGGGACTCTTAAACTACCTCCTTTCTCTCTTTGCTCAGCTCTTCTGCCTCCGTGGGTGCTaGTTGCCTGGACCTCCGTCA +
Preference number: 4 (lower is better)
Translates to: LQGQGLLNYLLSLFAQLFCLRGC*LPGPPS
Trigger: TGACGGAGGTCCAGGCAATCAGCACCCACGGAGGCA...GAAGAGCTGAGCAAAGAGAGAAAGGAGGTAGTTTAAGAGTCCCTGACCCTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254850.11
ENST00000355035.9
CDS-3UTR GCA 90 bp CTCAGTCCTCCAGGGTCAGGGACTCTTAAACTACCTCCTTTCTCTCTTTGCTCAGGTCCGGGCAAGGCCTaGACTGGAGGGTCTGAGTGT +
Preference number: 4 (lower is better)
Translates to: LSPPGSGTLKLPPFSLCSGPGKA*TGGSEC
Trigger: ACACTCAGACCCTCCAGTGCAGGCCTTGCCCGGACC...TGAGCAAAGAGAGAAAGGAGGTAGTTTAAGAGTCCCTGACCCTGGAGGACTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254850.11
CDS-3UTR GCA 90 bp CTCAGTCCTCCAGGGTCAGGGACTCTTAAACTACCTCCTTTCTCTCTTTGCTCATCCTGGGATTCAGCCTaGGAGTGCCTGGCCCCTCAC +
Preference number: 4 (lower is better)
Translates to: LSPPGSGTLKLPPFSLCSSWDSA*ECLAPH
Trigger: GTGAGGGGCCAGGCACTCGCAGGCTGAATCCCAGGA...TGAGCAAAGAGAGAAAGGAGGTAGTTTAAGAGTCCCTGACCCTGGAGGACTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355035.9
CDS-3UTR GCA 90 bp CTCCAGGGTCAGGGACTCTTAAACTACCTCCTTTCTCTCTTTGCTCAGCTCTTCCTCGGCTTGCAGCTGTaGACCCCCGTGACCCTCACT +
Preference number: 4 (lower is better)
Translates to: LQGQGLLNYLLSLFAQLFLGLQL*TPVTLT
Trigger: AGTGAGGGTCACGGGGGTGCACAGCTGCAAGCCGAG...GAAGAGCTGAGCAAAGAGAGAAAGGAGGTAGTTTAAGAGTCCCTGACCCTGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355035.9
CDS-3UTR CCA 90 bp TCAACAGAGAAGCCAGAGCTGGGCAGGTGTGGGGTATGGGTTAGCCAGAGGTGTAGGTGCAGATTCACGTaGAGGTTGATGGTGGGATGG +
Preference number: 4 (lower is better)
Translates to: STEKPELGRCGVWVSQRCRCRFT*RLMVGW
Trigger: CCATCCCACCATCAACCTCCACGTGAATCTGCACCT...ACACCTCTGGCTAACCCATACCCCACACCTGCCCAGCTCTGGCTTCTCTGTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355035.9
CDS-3UTR CCA 90 bp TTTCTCTCTTTGCTCAGCTCTTCCCCATACCCCTGTCTCAGTGTTTCTTCCTTTCGCTGTGCCAGGGGCTaGGCAGGAGGTGGCCCTTTC +
Preference number: 4 (lower is better)
Translates to: FLSLLSSSPYPCLSVSSFRCARG*AGGGPF
Trigger: GAAAGGGCCACCTCCTGCCCAGCCCCTGGCACAGCG...AAAGGAAGAAACACTGAGACAGGGGTATGGGGAAGAGCTGAGCAAAGAGAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000355035.9
CDS-3UTR TCA 90 bp TTTCTCTCTTTGCTCAGCTCTTCCCCATACCCCTGTCTCAGTGTTTCTTCCTTTGAAAGTCCTTGGCCATaGTGGGGCCCGGGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: FLSLLSSSPYPCLSVSSFESPWP*WGPGWS
Trigger: GCTCCAGCCCGGGCCCCATCATGGCCAAGGACTTTC...AAAGGAAGAAACACTGAGACAGGGGTATGGGGAAGAGCTGAGCAAAGAGAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254850.11
ENST00000355035.9
CDS-3UTR TCA 90 bp GTCCTCCAGGGTCAGGGACTCTTAAACTACCTCCTTTCTCTCTTTGCTCAGCTCCCAGCAGCAGGATGTTaGAGCTCAGGGCAAGCAGAC +
Preference number: 4 (lower is better)
Translates to: VLQGQGLLNYLLSLFAQLPAAGC*SSGQAD
Trigger: GTCTGCTTGCCCTGAGCTTCAACATCCTGCTGCTGG...GAGCTGAGCAAAGAGAGAAAGGAGGTAGTTTAAGAGTCCCTGACCCTGGAGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254850.11
ENST00000355035.9
CDS-3UTR GCA 90 bp TGGGATCTCAGTCCTCCAGGGTCAGGGACTCTTAAACTACCTCCTTTCTCTCTTTCCGTGGGTGCTGATTaGCTGGACCTCCGTCAGGGT +
Preference number: 4 (lower is better)
Translates to: WDLSPPGSGTLKLPPFSLSVGAD*LDLRQG
Trigger: ACCCTGACGGAGGTCCAGGCAATCAGCACCCACGGA...AAGAGAGAAAGGAGGTAGTTTAAGAGTCCCTGACCCTGGAGGACTGAGATCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254850.11
ENST00000355035.9
CDS-3UTR GCA 90 bp GTCCTCCAGGGTCAGGGACTCTTAAACTACCTCCTTTCTCTCTTTGCTCAGCTCGATTCAGCCTGCGAGTaGCTGGCCCCTCACCTTGAT +
Preference number: 4 (lower is better)
Translates to: VLQGQGLLNYLLSLFAQLDSACE*LAPHLD
Trigger: ATCAAGGTGAGGGGCCAGGCACTCGCAGGCTGAATC...GAGCTGAGCAAAGAGAGAAAGGAGGTAGTTTAAGAGTCCCTGACCCTGGAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355035.9
CDS-3UTR CCA 90 bp TTTCTCTCTTTGCTCAGCTCTTCCCCATACCCCTGTCTCAGTGTTTCTTCCTTTTCCCGCAGGCAACCCTaGCCTTGGCCAAGGAGGGGT +
Preference number: 4 (lower is better)
Translates to: FLSLLSSSPYPCLSVSSFSRRQP*PWPRRG
Trigger: ACCCCTCCTTGGCCAAGGCCAGGGTTGCCTGCGGGA...AAAGGAAGAAACACTGAGACAGGGGTATGGGGAAGAGCTGAGCAAAGAGAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000254850.11
CDS-3UTR CCA 90 bp TTTCTCTCTTTGCTCAGCTCTTCCCCATACCCCTGTCTCAGTGTTTCTTCCTTTTGGAGAGCGGACACCTaGCTCCCGCAGGCAACCCTG +
Preference number: 4 (lower is better)
Translates to: FLSLLSSSPYPCLSVSSFWRADT*LPQATL
Trigger: CAGGGTTGCCTGCGGGAGCCAGGTGTCCGCTCTCCA...AAAGGAAGAAACACTGAGACAGGGGTATGGGGAAGAGCTGAGCAAAGAGAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000254850.11
CDS-3UTR CCA 90 bp AGTCCTCCAGGGTCAGGGACTCTTAAACTACCTCCTTTCTCTCTTTGCTCAGCTTGGGTGCTGATTGCCTaGACCTCCGTCAGGGTGCTC +
Preference number: 4 (lower is better)
Translates to: SPPGSGTLKLPPFSLCSAWVLIA*TSVRVL
Trigger: GAGCACCCTGACGGAGGTCCAGGCAATCAGCACCCA...AGCTGAGCAAAGAGAGAAAGGAGGTAGTTTAAGAGTCCCTGACCCTGGAGGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254850.11
ENST00000355035.9
CDS-3UTR CCA 90 bp CTCCAGGGTCAGGGACTCTTAAACTACCTCCTTTCTCTCTTTGCTCAGCTCTTCTGGGAGCCGTTGCTGTaGAGGAGCTCCATCTGGCAG +
Preference number: 4 (lower is better)
Translates to: LQGQGLLNYLLSLFAQLFWEPLL*RSSIWQ
Trigger: CTGCCAGATGGAGCTCCTCCACAGCAACGGCTCCCA...GAAGAGCTGAGCAAAGAGAGAAAGGAGGTAGTTTAAGAGTCCCTGACCCTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254850.11
ENST00000355035.9
CDS-3UTR CCA 90 bp GTCCTCCAGGGTCAGGGACTCTTAAACTACCTCCTTTCTCTCTTTGCTCAGCTCGGCAGGTGTGGGGTATaGGTTAGCCAGAGGTGTGCT +
Preference number: 4 (lower is better)
Translates to: VLQGQGLLNYLLSLFAQLGRCGV*VSQRCA
Trigger: AGCACACCTCTGGCTAACCCATACCCCACACCTGCC...GAGCTGAGCAAAGAGAGAAAGGAGGTAGTTTAAGAGTCCCTGACCCTGGAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254850.11
ENST00000355035.9
CDS-3UTR TCA 90 bp CTCAGTCCTCCAGGGTCAGGGACTCTTAAACTACCTCCTTTCTCTCTTTGCTCATGGCTCCTAGGGATGTaGTCTTGTCACCCACGCTGC +
Preference number: 4 (lower is better)
Translates to: LSPPGSGTLKLPPFSLCSWLLGM*SCHPRC
Trigger: GCAGCGTGGGTGACAAGATCACATCCCTAGGAGCCA...TGAGCAAAGAGAGAAAGGAGGTAGTTTAAGAGTCCCTGACCCTGGAGGACTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254850.11
ENST00000355035.9
CDS-3UTR GCA 90 bp CTCCAGGGTCAGGGACTCTTAAACTACCTCCTTTCTCTCTTTGCTCAGCTCTTCCTTCCACCCAGCTCGTaGCCGTGCCAATTATCTGGC +
Preference number: 4 (lower is better)
Translates to: LQGQGLLNYLLSLFAQLFLPPSS*PCQLSG
Trigger: GCCAGATAATTGGCACGGGCACGAGCTGGGTGGAAG...GAAGAGCTGAGCAAAGAGAGAAAGGAGGTAGTTTAAGAGTCCCTGACCCTGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254850.11
ENST00000355035.9
CDS-3UTR CCA 90 bp TTCTCTCTTTGCTCAGCTCTTCCCCATACCCCTGTCTCAGTGTTTCTTCCTTTCTGGGAGCCGTTGCTGTaGAGGAGCTCCATCTGGCAG +
Preference number: 4 (lower is better)
Translates to: FSLCSALPHTPVSVFLPFWEPLL*RSSIWQ
Trigger: CTGCCAGATGGAGCTCCTCCACAGCAACGGCTCCCA...GAAAGGAAGAAACACTGAGACAGGGGTATGGGGAAGAGCTGAGCAAAGAGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254850.11
ENST00000355035.9
CDS-3UTR CCA 90 bp TTCTCTCTTTGCTCAGCTCTTCCCCATACCCCTGTCTCAGTGTTTCTTCCTTTCAGGCCACCTCGCCGGTaGCATTCCGCCTTTTCTCAC +
Preference number: 4 (lower is better)
Translates to: FSLCSALPHTPVSVFLPFRPPRR*HSAFSH
Trigger: GTGAGAAAAGGCGGAATGCCACCGGCGAGGTGGCCT...GAAAGGAAGAAACACTGAGACAGGGGTATGGGGAAGAGCTGAGCAAAGAGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254850.11
ENST00000355035.9
CDS-3UTR GCA 90 bp TGGGATCTCAGTCCTCCAGGGTCAGGGACTCTTAAACTACCTCCTTTCTCTCTTCAGGGCATCGTGATCTaGTTTCAGGTCCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: WDLSPPGSGTLKLPPFSLQGIVI*FQVLLL
Trigger: CAGCAGCAGGACCTGAAAGCAGATCACGATGCCCTG...AAGAGAGAAAGGAGGTAGTTTAAGAGTCCCTGACCCTGGAGGACTGAGATCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254850.11
ENST00000355035.9
CDS-3UTR CCA 90 bp GTCCTCCAGGGTCAGGGACTCTTAAACTACCTCCTTTCTCTCTTTGCTCAGCTCTGCAGCTGTGCACTTTaGGACCCAGTCACACAGATG +
Preference number: 4 (lower is better)
Translates to: VLQGQGLLNYLLSLFAQLCSCAL*DPVTQM
Trigger: CATCTGTGTGACTGGGTCCCAAAGTGCACAGCTGCA...GAGCTGAGCAAAGAGAGAAAGGAGGTAGTTTAAGAGTCCCTGACCCTGGAGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254850.11
CDS-3UTR TCA 90 bp CTCCAGGGTCAGGGACTCTTAAACTACCTCCTTTCTCTCTTTGCTCAGCTCTTCGCAGGAGGTGGCCCTTaGTGGAAAGGATGGTCATTT +
Preference number: 4 (lower is better)
Translates to: LQGQGLLNYLLSLFAQLFAGGGP*WKGWSF
Trigger: AAATGACCATCCTTTCCATCAAGGGCCACCTCCTGC...GAAGAGCTGAGCAAAGAGAGAAAGGAGGTAGTTTAAGAGTCCCTGACCCTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254850.11
CDS-3UTR TCA 90 bp TTCTCTCTTTGCTCAGCTCTTCCCCATACCCCTGTCTCAGTGTTTCTTCCTTTCACCCAGTCACACAGATaGCCACCAGCAGCAGGATGT +
Preference number: 4 (lower is better)
Translates to: FSLCSALPHTPVSVFLPFTQSHR*PPAAGC
Trigger: ACATCCTGCTGCTGGTGGTCATCTGTGTGACTGGGT...GAAAGGAAGAAACACTGAGACAGGGGTATGGGGAAGAGCTGAGCAAAGAGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254850.11
ENST00000355035.9
CDS-3UTR TCA 90 bp AGTCCTCCAGGGTCAGGGACTCTTAAACTACCTCCTTTCTCTCTTTGCTCAGCTCCTGGCCCCTCACCTTaGTGGAAAGGATGGTCATTT +
Preference number: 4 (lower is better)
Translates to: SPPGSGTLKLPPFSLCSAPGPSP*WKGWSF
Trigger: AAATGACCATCCTTTCCATCAAGGTGAGGGGCCAGG...AGCTGAGCAAAGAGAGAAAGGAGGTAGTTTAAGAGTCCCTGACCCTGGAGGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355035.9
CDS-3UTR CCA 90 bp CTCAGTCCTCCAGGGTCAGGGACTCTTAAACTACCTCCTTTCTCTCTTTGCTCACCCGTGCCAATTATCTaGCTGAGTGACAGCCCAGTT +
Preference number: 4 (lower is better)
Translates to: LSPPGSGTLKLPPFSLCSPVPII*LSDSPV
Trigger: AACTGGGCTGTCACTCAGCCAGATAATTGGCACGGG...TGAGCAAAGAGAGAAAGGAGGTAGTTTAAGAGTCCCTGACCCTGGAGGACTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254850.11
ENST00000355035.9
CDS-3UTR CCA 90 bp CTCCAGGGTCAGGGACTCTTAAACTACCTCCTTTCTCTCTTTGCTCAGCTCTTCGGGCTGGGCAGGAGGTaGCCCTTTCAAAAATGGATT +
Preference number: 4 (lower is better)
Translates to: LQGQGLLNYLLSLFAQLFGLGRR*PFQKWI
Trigger: AATCCATTTTTGAAAGGGCCACCTCCTGCCCAGCCC...GAAGAGCTGAGCAAAGAGAGAAAGGAGGTAGTTTAAGAGTCCCTGACCCTGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355035.9
CDS-3UTR TCA 90 bp TTTCTCTCTTTGCTCAGCTCTTCCCCATACCCCTGTCTCAGTGTTTCTTCCTTTAAGAGCAGGGCATCGTaGTCTGCTTTCAGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: FLSLLSSSPYPCLSVSSFKSRAS*SAFRSC
Trigger: GCAGGACCTGAAAGCAGATCACGATGCCCTGCTCTT...AAAGGAAGAAACACTGAGACAGGGGTATGGGGAAGAGCTGAGCAAAGAGAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254850.11
ENST00000355035.9
CDS-3UTR TCA 90 bp CTCAGTCCTCCAGGGTCAGGGACTCTTAAACTACCTCCTTTCTCTCTTTGCTCATGCCAATTATCTGGCTaGGTGACAGCCCAGTTCTTG +
Preference number: 4 (lower is better)
Translates to: LSPPGSGTLKLPPFSLCSCQLSG*VTAQFL
Trigger: CAAGAACTGGGCTGTCACTCAGCCAGATAATTGGCA...TGAGCAAAGAGAGAAAGGAGGTAGTTTAAGAGTCCCTGACCCTGGAGGACTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254850.11
ENST00000355035.9
CDS-3UTR TCA 90 bp TTTCTCTCTTTGCTCAGCTCTTCCCCATACCCCTGTCTCAGTGTTTCTTCCTTTGATTCACGTGGAGGTTaGTGGTGGGATGGAACGCAG +
Preference number: 4 (lower is better)
Translates to: FLSLLSSSPYPCLSVSSFDSRGG*WWDGTQ
Trigger: CTGCGTTCCATCCCACCATCAACCTCCACGTGAATC...AAAGGAAGAAACACTGAGACAGGGGTATGGGGAAGAGCTGAGCAAAGAGAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355035.9
CDS-3UTR CCA 90 bp CTCAGTCCTCCAGGGTCAGGGACTCTTAAACTACCTCCTTTCTCTCTTTGCTCAAATTACAGAAGGAGGTaGGATCTCAGTCCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: LSPPGSGTLKLPPFSLCSNYRRR*DLSPPG
Trigger: CCCTGGAGGACTGAGATCCCACCTCCTTCTGTAATT...TGAGCAAAGAGAGAAAGGAGGTAGTTTAAGAGTCCCTGACCCTGGAGGACTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254850.11
ENST00000355035.9
CDS-3UTR TCA 90 bp CTCAGTCCTCCAGGGTCAGGGACTCTTAAACTACCTCCTTTCTCTCTTTGCTCAAGCTGCTGGATATCTTaGAAGTCCTTGGCCATGATG +
Preference number: 4 (lower is better)
Translates to: LSPPGSGTLKLPPFSLCSSCWIS*KSLAMM
Trigger: CATCATGGCCAAGGACTTTCAAGATATCCAGCAGCT...TGAGCAAAGAGAGAAAGGAGGTAGTTTAAGAGTCCCTGACCCTGGAGGACTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254850.11
ENST00000355035.9
CDS-3UTR TCA 90 bp TGGGATCTCAGTCCTCCAGGGTCAGGGACTCTTAAACTACCTCCTTTCTCTCTTTCGTGTGTTGTACAATaGATTTCTGCTCCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: WDLSPPGSGTLKLPPFSLSCVVQ*ISAPPR
Trigger: CCTGGGAGGAGCAGAAATTCATTGTACAACACACGA...AAGAGAGAAAGGAGGTAGTTTAAGAGTCCCTGACCCTGGAGGACTGAGATCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254850.11
ENST00000355035.9
CDS-3UTR TCA 90 bp CTCAGTCCTCCAGGGTCAGGGACTCTTAAACTACCTCCTTTCTCTCTTTGCTCAGACCTATCCAGGTATTaGAGGGGTTCGTGTGTTGTA +
Preference number: 4 (lower is better)
Translates to: LSPPGSGTLKLPPFSLCSDLSRY*RGSCVV
Trigger: TACAACACACGAACCCCTTCAATACCTGGATAGGTC...TGAGCAAAGAGAGAAAGGAGGTAGTTTAAGAGTCCCTGACCCTGGAGGACTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254850.11
ENST00000355035.9
CDS-3UTR TCA 90 bp CTCCAGGGTCAGGGACTCTTAAACTACCTCCTTTCTCTCTTTGCTCAGCTCTTCGACCTATCCAGGTATTaGAGGGGTTCGTGTGTTGTA +
Preference number: 4 (lower is better)
Translates to: LQGQGLLNYLLSLFAQLFDLSRY*RGSCVV
Trigger: TACAACACACGAACCCCTTCAATACCTGGATAGGTC...GAAGAGCTGAGCAAAGAGAGAAAGGAGGTAGTTTAAGAGTCCCTGACCCTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254850.11
ENST00000355035.9
CDS-3UTR CCA 90 bp TTTCTCTCTTTGCTCAGCTCTTCCCCATACCCCTGTCTCAGTGTTTCTTCCTTTCCCGTGCCAATTATCTaGCTGAGTGACAGCCCAGTT +
Preference number: 4 (lower is better)
Translates to: FLSLLSSSPYPCLSVSSFPVPII*LSDSPV
Trigger: AACTGGGCTGTCACTCAGCCAGATAATTGGCACGGG...AAAGGAAGAAACACTGAGACAGGGGTATGGGGAAGAGCTGAGCAAAGAGAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254850.11
ENST00000355035.9
CDS-3UTR TCA 90 bp CTCAGTCCTCCAGGGTCAGGGACTCTTAAACTACCTCCTTTCTCTCTTTGCTCAAATTATCTGGCTGAGTaGCAGCCCAGTTCTTGTAGT +
Preference number: 4 (lower is better)
Translates to: LSPPGSGTLKLPPFSLCSNYLAE*QPSSCS
Trigger: ACTACAAGAACTGGGCTGTCACTCAGCCAGATAATT...TGAGCAAAGAGAGAAAGGAGGTAGTTTAAGAGTCCCTGACCCTGGAGGACTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254850.11
ENST00000355035.9
CDS-3UTR CCA 90 bp AGCATTTGTTTCTTCTTTCCTACGCCATTGAAGAGGCTGACGATTATAATAATTGGAGCTGGGCTGGGCTaGGCTGAGGTTGCTCTGAGG +
Preference number: 4 (lower is better)
Translates to: SICFFFPTPLKRLTIIIIGAGLG*AEVALR
Trigger: CCTCAGAGCAACCTCAGCCCAGCCCAGCCCAGCTCC...AATTATTATAATCGTCAGCCTCTTCAATGGCGTAGGAAAGAAGAAACAAATGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254850.11
ENST00000355035.9
CDS-3UTR CCA 90 bp TCCTACGCCATTGAAGAGGCTGACGATTATAATAATTACAATGAATTACAGAAGCCCACGCTGCCTCCGTaGGTGCTGATTGCCTGGACC +
Preference number: 4 (lower is better)
Translates to: SYAIEEADDYNNYNELQKPTLPP*VLIAWT
Trigger: GGTCCAGGCAATCAGCACCCACGGAGGCAGCGTGGG...CTTCTGTAATTCATTGTAATTATTATAATCGTCAGCCTCTTCAATGGCGTAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254850.11
ENST00000355035.9
CDS-3UTR TCA 90 bp TACGCCATTGAAGAGGCTGACGATTATAATAATTACAATGAATTACAGAAGGAGTGCCTCCGTGGGTGCTaGTTGCCTGGACCTCCGTCA +
Preference number: 4 (lower is better)
Translates to: YAIEEADDYNNYNELQKECLRGC*LPGPPS
Trigger: TGACGGAGGTCCAGGCAATCAGCACCCACGGAGGCA...CTCCTTCTGTAATTCATTGTAATTATTATAATCGTCAGCCTCTTCAATGGCGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254850.11
ENST00000355035.9
CDS-3UTR TCA 90 bp ATTATAATAATTACAATGAATTACAGAAGGAGGTGGGATCTCAGTCCTCCAGGGTGGCTCCTAGGGATGTaGTCTTGTCACCCACGCTGC +
Preference number: 4 (lower is better)
Translates to: IIIITMNYRRRWDLSPPGWLLGM*SCHPRC
Trigger: GCAGCGTGGGTGACAAGATCACATCCCTAGGAGCCA...CCCTGGAGGACTGAGATCCCACCTCCTTCTGTAATTCATTGTAATTATTATAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254850.11
ENST00000355035.9
CDS-3UTR CCA 90 bp AGCATTTGTTTCTTCTTTCCTACGCCATTGAAGAGGCTGACGATTATAATAATTTGGAGGAGCTCCATCTaGCAGGCCACGAAGCGCAGG +
Preference number: 4 (lower is better)
Translates to: SICFFFPTPLKRLTIIIIWRSSI*QATKRR
Trigger: CCTGCGCTTCGTGGCCTGCCAGATGGAGCTCCTCCA...AATTATTATAATCGTCAGCCTCTTCAATGGCGTAGGAAAGAAGAAACAAATGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254850.11
ENST00000355035.9
CDS-3UTR CCA 90 bp CATTTGTTTCTTCTTTCCTACGCCATTGAAGAGGCTGACGATTATAATAATTACTGGAGGAGCTCCATCTaGCAGGCCACGAAGCGCAGG +
Preference number: 4 (lower is better)
Translates to: HLFLLSYAIEEADDYNNYWRSSI*QATKRR
Trigger: CCTGCGCTTCGTGGCCTGCCAGATGGAGCTCCTCCA...GTAATTATTATAATCGTCAGCCTCTTCAATGGCGTAGGAAAGAAGAAACAAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254850.11
ENST00000355035.9
CDS-3UTR CCA 90 bp AGCATTTGTTTCTTCTTTCCTACGCCATTGAAGAGGCTGACGATTATAATAATTGGGCAGCAGGTCCTTTaGGAGCCGTTGCTGTGGAGG +
Preference number: 4 (lower is better)
Translates to: SICFFFPTPLKRLTIIIIGQQVL*EPLLWR
Trigger: CCTCCACAGCAACGGCTCCCAAAGGACCTGCTGCCC...AATTATTATAATCGTCAGCCTCTTCAATGGCGTAGGAAAGAAGAAACAAATGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254850.11
ENST00000355035.9
CDS-3UTR CCA 90 bp TGGGATCTCAGTCCTCCAGGGTCAGGGACTCTTAAACTACCTCCTTTCTCTCTTTGGCCCTTTCAAAAATaGATTTCCTCTCCTGGGATT +
Preference number: 4 (lower is better)
Translates to: WDLSPPGSGTLKLPPFSLWPFQK*ISSPGI
Trigger: AATCCCAGGAGAGGAAATCCATTTTTGAAAGGGCCA...AAGAGAGAAAGGAGGTAGTTTAAGAGTCCCTGACCCTGGAGGACTGAGATCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355035.9
CDS-3UTR GCA 90 bp TCCTACGCCATTGAAGAGGCTGACGATTATAATAATTACAATGAATTACAGAAGCTCCGCAGCTCGGCTTaGAGCTGTGCACTTTGGGAC +
Preference number: 4 (lower is better)
Translates to: SYAIEEADDYNNYNELQKLRSSA*SCALWD
Trigger: GTCCCAAAGTGCACAGCTGCAAGCCGAGCTGCGGAG...CTTCTGTAATTCATTGTAATTATTATAATCGTCAGCCTCTTCAATGGCGTAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254850.11
CDS-3UTR GCA 90 bp TACGCCATTGAAGAGGCTGACGATTATAATAATTACAATGAATTACAGAAGGAGTCCGTGGGTGCTGATTaGCTGGACCTCCGTCAGGGT +
Preference number: 4 (lower is better)
Translates to: YAIEEADDYNNYNELQKESVGAD*LDLRQG
Trigger: ACCCTGACGGAGGTCCAGGCAATCAGCACCCACGGA...CTCCTTCTGTAATTCATTGTAATTATTATAATCGTCAGCCTCTTCAATGGCGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254850.11
ENST00000355035.9
CDS-3UTR GCA 90 bp TCCTACGCCATTGAAGAGGCTGACGATTATAATAATTACAATGAATTACAGAAGGGGCTGGGGCAGAGGTaGAGATTCACGTGGAGGTTG +
Preference number: 4 (lower is better)
Translates to: SYAIEEADDYNNYNELQKGLGQR*RFTWRL
Trigger: CAACCTCCACGTGAATCTGCACCTCTGCCCCAGCCC...CTTCTGTAATTCATTGTAATTATTATAATCGTCAGCCTCTTCAATGGCGTAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355035.9
CDS-3UTR CCA 90 bp TCCTACGCCATTGAAGAGGCTGACGATTATAATAATTACAATGAATTACAGAAGGTCCAAGCTCTAACCTaGCACCTCCTGGCCTGGGAC +
Preference number: 4 (lower is better)
Translates to: SYAIEEADDYNNYNELQKVQALT*HLLAWD
Trigger: GTCCCAGGCCAGGAGGTGCCAGGTTAGAGCTTGGAC...CTTCTGTAATTCATTGTAATTATTATAATCGTCAGCCTCTTCAATGGCGTAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254850.11
CDS-3UTR CCA 90 bp TACGCCATTGAAGAGGCTGACGATTATAATAATTACAATGAATTACAGAAGGAGGAGAACTGGGGCAGGTaGAGCTCACAGGGGAGAGGA +
Preference number: 4 (lower is better)
Translates to: YAIEEADDYNNYNELQKEENWGR*SSQGRG
Trigger: TCCTCTCCCCTGTGAGCTCCACCTGCCCCAGTTCTC...CTCCTTCTGTAATTCATTGTAATTATTATAATCGTCAGCCTCTTCAATGGCGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254850.11
CDS-3UTR CCA 90 bp TACGCCATTGAAGAGGCTGACGATTATAATAATTACAATGAATTACAGAAGGAGTGGGTGCTGATTGCCTaGACCTCCGTCAGGGTGCTC +
Preference number: 4 (lower is better)
Translates to: YAIEEADDYNNYNELQKEWVLIA*TSVRVL
Trigger: GAGCACCCTGACGGAGGTCCAGGCAATCAGCACCCA...CTCCTTCTGTAATTCATTGTAATTATTATAATCGTCAGCCTCTTCAATGGCGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254850.11
ENST00000355035.9
CDS-3UTR CCA 90 bp ATTATAATAATTACAATGAATTACAGAAGGAGGTGGGATCTCAGTCCTCCAGGGCAGCGGCCATCCGGCTaGACTTCAACACAGTCTTCA +
Preference number: 4 (lower is better)
Translates to: IIIITMNYRRRWDLSPPGQRPSG*TSTQSS
Trigger: TGAAGACTGTGTTGAAGTCCAGCCGGATGGCCGCTG...CCCTGGAGGACTGAGATCCCACCTCCTTCTGTAATTCATTGTAATTATTATAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254850.11
ENST00000355035.9
CDS-3UTR CCA 90 bp CATTTGTTTCTTCTTTCCTACGCCATTGAAGAGGCTGACGATTATAATAATTACAGGCCACCTCGCCGGTaGCATTCCGCCTTTTCTCAC +
Preference number: 4 (lower is better)
Translates to: HLFLLSYAIEEADDYNNYRPPRR*HSAFSH
Trigger: GTGAGAAAAGGCGGAATGCCACCGGCGAGGTGGCCT...GTAATTATTATAATCGTCAGCCTCTTCAATGGCGTAGGAAAGAAGAAACAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254850.11
ENST00000355035.9
CDS-3UTR CCA 90 bp TACGCCATTGAAGAGGCTGACGATTATAATAATTACAATGAATTACAGAAGGAGAGGTTGATGGTGGGATaGAACGCAGGGTCGGAGGGG +
Preference number: 4 (lower is better)
Translates to: YAIEEADDYNNYNELQKERLMVG*NAGSEG
Trigger: CCCCTCCGACCCTGCGTTCCATCCCACCATCAACCT...CTCCTTCTGTAATTCATTGTAATTATTATAATCGTCAGCCTCTTCAATGGCGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355035.9
CDS-3UTR CCA 90 bp AGCATTTGTTTCTTCTTTCCTACGCCATTGAAGAGGCTGACGATTATAATAATTCAGCCTGCGAGTGCCTaGCCCCTCACCTTGATGGAA +
Preference number: 4 (lower is better)
Translates to: SICFFFPTPLKRLTIIIIQPASA*PLTLME
Trigger: TTCCATCAAGGTGAGGGGCCAGGCACTCGCAGGCTG...AATTATTATAATCGTCAGCCTCTTCAATGGCGTAGGAAAGAAGAAACAAATGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355035.9
CDS-3UTR TCA 90 bp TACGCCATTGAAGAGGCTGACGATTATAATAATTACAATGAATTACAGAAGGAGCCAGCAGCAGGATGTTaGAGCTCAGGGCAAGCAGAC +
Preference number: 4 (lower is better)
Translates to: YAIEEADDYNNYNELQKEPAAGC*SSGQAD
Trigger: GTCTGCTTGCCCTGAGCTTCAACATCCTGCTGCTGG...CTCCTTCTGTAATTCATTGTAATTATTATAATCGTCAGCCTCTTCAATGGCGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254850.11
ENST00000355035.9
CDS-3UTR GCA 90 bp TACGCCATTGAAGAGGCTGACGATTATAATAATTACAATGAATTACAGAAGGAGCTTCCACCCAGCTCGTaGCCGTGCCAATTATCTGGC +
Preference number: 4 (lower is better)
Translates to: YAIEEADDYNNYNELQKELPPSS*PCQLSG
Trigger: GCCAGATAATTGGCACGGGCACGAGCTGGGTGGAAG...CTCCTTCTGTAATTCATTGTAATTATTATAATCGTCAGCCTCTTCAATGGCGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254850.11
ENST00000355035.9
CDS-3UTR TCA 90 bp TACGCCATTGAAGAGGCTGACGATTATAATAATTACAATGAATTACAGAAGGAGTCAGGGCAAGCAGACTaGAGCAGACCATGGAGCAGA +
Preference number: 4 (lower is better)
Translates to: YAIEEADDYNNYNELQKESGQAD*SRPWSR
Trigger: TCTGCTCCATGGTCTGCTTCAGTCTGCTTGCCCTGA...CTCCTTCTGTAATTCATTGTAATTATTATAATCGTCAGCCTCTTCAATGGCGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254850.11
ENST00000355035.9
CDS-3UTR TCA 90 bp TCCTACGCCATTGAAGAGGCTGACGATTATAATAATTACAATGAATTACAGAAGAAGAGCAGGGCATCGTaGTCTGCTTTCAGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: SYAIEEADDYNNYNELQKKSRAS*SAFRSC
Trigger: GCAGGACCTGAAAGCAGATCACGATGCCCTGCTCTT...CTTCTGTAATTCATTGTAATTATTATAATCGTCAGCCTCTTCAATGGCGTAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254850.11
ENST00000355035.9
CDS-3UTR TCA 90 bp ATTATAATAATTACAATGAATTACAGAAGGAGGTGGGATCTCAGTCCTCCAGGGTGCCAATTATCTGGCTaGGTGACAGCCCAGTTCTTG +
Preference number: 4 (lower is better)
Translates to: IIIITMNYRRRWDLSPPGCQLSG*VTAQFL
Trigger: CAAGAACTGGGCTGTCACTCAGCCAGATAATTGGCA...CCCTGGAGGACTGAGATCCCACCTCCTTCTGTAATTCATTGTAATTATTATAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254850.11
ENST00000355035.9
CDS-3UTR GCA 90 bp AGCATTTGTTTCTTCTTTCCTACGCCATTGAAGAGGCTGACGATTATAATAATTAGGTCCACGGGGAAGTaGTTCAGATGGAAGAGCAGG +
Preference number: 4 (lower is better)
Translates to: SICFFFPTPLKRLTIIIIRSTGK*FRWKSR
Trigger: CCTGCTCTTCCATCTGAAGCACTTCCCCGTGGACCT...AATTATTATAATCGTCAGCCTCTTCAATGGCGTAGGAAAGAAGAAACAAATGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254850.11
ENST00000355035.9
CDS-3UTR GCA 90 bp AGCATTTGTTTCTTCTTTCCTACGCCATTGAAGAGGCTGACGATTATAATAATTTCCTTTGGGAGCCGTTaGTGTGGAGGAGCTCCATCT +
Preference number: 4 (lower is better)
Translates to: SICFFFPTPLKRLTIIIISFGSR*CGGAPS
Trigger: AGATGGAGCTCCTCCACAGCAACGGCTCCCAAAGGA...AATTATTATAATCGTCAGCCTCTTCAATGGCGTAGGAAAGAAGAAACAAATGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254850.11
ENST00000355035.9
CDS-3UTR GCA 90 bp TCCTACGCCATTGAAGAGGCTGACGATTATAATAATTACAATGAATTACAGAAGACCCAGCGGTACACCTaGAGGCAGAAGTCATCGTTC +
Preference number: 4 (lower is better)
Translates to: SYAIEEADDYNNYNELQKTQRYT*RQKSSF
Trigger: GAACGATGACTTCTGCCTGCAGGTGTACCGCTGGGT...CTTCTGTAATTCATTGTAATTATTATAATCGTCAGCCTCTTCAATGGCGTAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254850.11
ENST00000355035.9
CDS-3UTR GCA 90 bp CATTTGTTTCTTCTTTCCTACGCCATTGAAGAGGCTGACGATTATAATAATTACACCCAGCGGTACACCTaGAGGCAGAAGTCATCGTTC +
Preference number: 4 (lower is better)
Translates to: HLFLLSYAIEEADDYNNYTQRYT*RQKSSF
Trigger: GAACGATGACTTCTGCCTGCAGGTGTACCGCTGGGT...GTAATTATTATAATCGTCAGCCTCTTCAATGGCGTAGGAAAGAAGAAACAAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254850.11
ENST00000355035.9
CDS-3UTR CCA 90 bp TACGCCATTGAAGAGGCTGACGATTATAATAATTACAATGAATTACAGAAGGAGCAGCGGCCATCCGGCTaGACTTCAACACAGTCTTCA +
Preference number: 4 (lower is better)
Translates to: YAIEEADDYNNYNELQKEQRPSG*TSTQSS
Trigger: TGAAGACTGTGTTGAAGTCCAGCCGGATGGCCGCTG...CTCCTTCTGTAATTCATTGTAATTATTATAATCGTCAGCCTCTTCAATGGCGTA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254850.11
ENST00000355035.9
CDS-3UTR CCA 90 bp ATTATAATAATTACAATGAATTACAGAAGGAGGTGGGATCTCAGTCCTCCAGGGAATTACAGAAGGAGGTaGGATCTCAGTCCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: IIIITMNYRRRWDLSPPGNYRRR*DLSPPG
Trigger: CCCTGGAGGACTGAGATCCCACCTCCTTCTGTAATT...CCCTGGAGGACTGAGATCCCACCTCCTTCTGTAATTCATTGTAATTATTATAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254850.11
ENST00000355035.9
CDS-3UTR CCA 90 bp TCCTACGCCATTGAAGAGGCTGACGATTATAATAATTACAATGAATTACAGAAGTTCGGGGTGGTGGCCTaGGTAGGATCTGTGAAAGGT +
Preference number: 4 (lower is better)
Translates to: SYAIEEADDYNNYNELQKFGVVA*VGSVKG
Trigger: ACCTTTCACAGATCCTACCCAGGCCACCACCCCGAA...CTTCTGTAATTCATTGTAATTATTATAATCGTCAGCCTCTTCAATGGCGTAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355035.9
CDS-3UTR TCA 90 bp ATTATAATAATTACAATGAATTACAGAAGGAGGTGGGATCTCAGTCCTCCAGGGAGCTGCTGGATATCTTaGAAGTCCTTGGCCATGATG +
Preference number: 4 (lower is better)
Translates to: IIIITMNYRRRWDLSPPGSCWIS*KSLAMM
Trigger: CATCATGGCCAAGGACTTTCAAGATATCCAGCAGCT...CCCTGGAGGACTGAGATCCCACCTCCTTCTGTAATTCATTGTAATTATTATAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254850.11
ENST00000355035.9
CDS-3UTR TCA 90 bp AGCATTTGTTTCTTCTTTCCTACGCCATTGAAGAGGCTGACGATTATAATAATTAATTATCTGGCTGAGTaGCAGCCCAGTTCTTGTAGT +
Preference number: 4 (lower is better)
Translates to: SICFFFPTPLKRLTIIIINYLAE*QPSSCS
Trigger: ACTACAAGAACTGGGCTGTCACTCAGCCAGATAATT...AATTATTATAATCGTCAGCCTCTTCAATGGCGTAGGAAAGAAGAAACAAATGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254850.11
ENST00000355035.9
CDS-3UTR GCA 90 bp AGCATTTGTTTCTTCTTTCCTACGCCATTGAAGAGGCTGACGATTATAATAATTTGTACAATGAATTTCTaGTCCTCCCAGGAGTTGATG +
Preference number: 4 (lower is better)
Translates to: SICFFFPTPLKRLTIIIICTMNF*SSQELM
Trigger: CATCAACTCCTGGGAGGAGCAGAAATTCATTGTACA...AATTATTATAATCGTCAGCCTCTTCAATGGCGTAGGAAAGAAGAAACAAATGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254850.11
ENST00000355035.9
CDS-3UTR GCA 90 bp TACGCCATTGAAGAGGCTGACGATTATAATAATTACAATGAATTACAGAAGGAGTGTACAATGAATTTCTaGTCCTCCCAGGAGTTGATG +
Preference number: 4 (lower is better)
Translates to: YAIEEADDYNNYNELQKECTMNF*SSQELM
Trigger: CATCAACTCCTGGGAGGAGCAGAAATTCATTGTACA...CTCCTTCTGTAATTCATTGTAATTATTATAATCGTCAGCCTCTTCAATGGCGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254850.11
ENST00000355035.9
CDS TCA 90 bp TGGGGCCCGGGCTGGAGCTGGAGCTGGAGCTGGGCTGGGCTGGGCTaGGGTTGCTCTGAGGGCTGGGGCTGTGAAAGGTGTGGAGAGCGG +
Preference number: 5 (lower is better)
Translates to: WGPGWSWSWSWAGLG*GCSEGWGCERCGER
Trigger: CCGCTCTCCACACCTTTCACAGCCCCAGCCCTCAGAGCAACCTCAGCCCAGCCCAGCCCAGCTCCAGCTCCAGCTCCAGCCCGGGCCCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254850.11
ENST00000574868.1
CDS GCA 90 bp CGCAGGAGGAATCCAACCTCAGAGAGCCCCGTCCGGCCCAGACCCTaGCCCAGCCCAGGCAACACAAACACTGTCCTCAGGCCCAGCCAC +
Preference number: 5 (lower is better)
Translates to: RRRNPTSESPVRPRP*PSPGNTNTVLRPSH
Trigger: GTGGCTGGGCCTGAGGACAGTGTTTGTGTTGCCTGGGCTGGGGCAGGGTCTGGGCCGGACGGGGCTCTCTGAGGTTGGATTCCTCCTGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574868.1
CDS CCA 90 bp GGGCAGCAGGTCCTTTGGGAGCCGTTGCTGTGGAGGAGCTCCATCTaGCAGGCCACGAAGCGCAGGTCCACGGGGAAGTGCTTCAGATGG +
Preference number: 5 (lower is better)
Translates to: GQQVLWEPLLWRSSI*QATKRRSTGKCFRW
Trigger: CCATCTGAAGCACTTCCCCGTGGACCTGCGCTTCGTGGCCTGCCAGATGGAGCTCCTCCACAGCAACGGCTCCCAAAGGACCTGCTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254850.11
ENST00000355035.9
ENST00000446679.6
CDS CCA 90 bp GTATGGGTTAGCCAGAGGTGTGCTGGGGTCAGGCCACCTCGCCGGTaGCATTCCGCCTTTTCTCACACACCCAGCGGTACACCTGCAGGC +
Preference number: 5 (lower is better)
Translates to: VWVSQRCAGVRPPRR*HSAFSHTPSGTPAG
Trigger: GCCTGCAGGTGTACCGCTGGGTGTGTGAGAAAAGGCGGAATGCCACCGGCGAGGTGGCCTGACCCCAGCACACCTCTGGCTAACCCATAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254850.11
ENST00000355035.9
CDS GCA 90 bp CACACACCGCACACGTACACACTACACACACCGCACACGTACACATaGACGCACATGCGCACACACCCCGGAGGCTCTCTGACCTGCTTT +
Preference number: 5 (lower is better)
Translates to: HTPHTYTLHTPHTYT*THMRTHPGGSLTCF
Trigger: AAAGCAGGTCAGAGAGCCTCCGGGGTGTGTGCGCATGTGCGTGCATGTGTACGTGTGCGGTGTGTGTAGTGTGTACGTGTGCGGTGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450034.7
ENST00000576487.5
CDS-3UTR CAA 90 bp CTCAGTCCTCCAGGGTCAGGGACTCTTAAACTACCTCCTTTCTCTCTTTGCTCAGCTCCGCAGCTCGGCTaGCAGCTGTGCACCCCCGTG +
Preference number: 5 (lower is better)
Translates to: LSPPGSGTLKLPPFSLCSAPQLG*QLCTPV
Trigger: CACGGGGGTGCACAGCTGCAAGCCGAGCTGCGGAGC...TGAGCAAAGAGAGAAAGGAGGTAGTTTAAGAGTCCCTGACCCTGGAGGACTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355035.9
CDS-3UTR CAA 90 bp CTCAGTCCTCCAGGGTCAGGGACTCTTAAACTACCTCCTTTCTCTCTTTGCTCAGGGGCAGCAGGTCCTTaGGGAGCCGTTGCTGTGGAG +
Preference number: 5 (lower is better)
Translates to: LSPPGSGTLKLPPFSLCSGAAGP*GAVAVE
Trigger: CTCCACAGCAACGGCTCCCAAAGGACCTGCTGCCCC...TGAGCAAAGAGAGAAAGGAGGTAGTTTAAGAGTCCCTGACCCTGGAGGACTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254850.11
ENST00000355035.9
CDS-3UTR CAA 90 bp AGTCCTCCAGGGTCAGGGACTCTTAAACTACCTCCTTTCTCTCTTTGCTCAGCTGCTCCGCAGCTCGGCTaGCAGCTGTGCACTTTGGGA +
Preference number: 5 (lower is better)
Translates to: SPPGSGTLKLPPFSLCSAAPQLG*QLCTLG
Trigger: TCCCAAAGTGCACAGCTGCAAGCCGAGCTGCGGAGC...AGCTGAGCAAAGAGAGAAAGGAGGTAGTTTAAGAGTCCCTGACCCTGGAGGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254850.11
CDS-3UTR CAA 90 bp TGGGATCTCAGTCCTCCAGGGTCAGGGACTCTTAAACTACCTCCTTTCTCTCTTCAGGCAACCCTGGCCTaGGCCAAGGAGGGGTTAAAG +
Preference number: 5 (lower is better)
Translates to: WDLSPPGSGTLKLPPFSLQATLA*AKEGLK
Trigger: CTTTAACCCCTCCTTGGCCAAGGCCAGGGTTGCCTG...AAGAGAGAAAGGAGGTAGTTTAAGAGTCCCTGACCCTGGAGGACTGAGATCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254850.11
CDS-3UTR CAA 90 bp CTCCAGGGTCAGGGACTCTTAAACTACCTCCTTTCTCTCTTTGCTCAGCTCTTCCCTAGGGATGTGATCTaGTCACCCACGCTGCCTCCG +
Preference number: 5 (lower is better)
Translates to: LQGQGLLNYLLSLFAQLFPRDVI*SPTLPP
Trigger: CGGAGGCAGCGTGGGTGACAAGATCACATCCCTAGG...GAAGAGCTGAGCAAAGAGAGAAAGGAGGTAGTTTAAGAGTCCCTGACCCTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254850.11
ENST00000355035.9
CDS-3UTR CAA 90 bp CTCCAGGGTCAGGGACTCTTAAACTACCTCCTTTCTCTCTTTGCTCAGCTCTTCGTCCTTTGGGAGCCGTaGCTGTGGAGGAGCTCCATC +
Preference number: 5 (lower is better)
Translates to: LQGQGLLNYLLSLFAQLFVLWEP*LWRSSI
Trigger: GATGGAGCTCCTCCACAGCAACGGCTCCCAAAGGAC...GAAGAGCTGAGCAAAGAGAGAAAGGAGGTAGTTTAAGAGTCCCTGACCCTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254850.11
ENST00000355035.9
CDS-3UTR CAA 90 bp TGGGATCTCAGTCCTCCAGGGTCAGGGACTCTTAAACTACCTCCTTTCTCTCTTGTCCTTTGGGAGCCGTaGCTGTGGAGGAGCTCCATC +
Preference number: 5 (lower is better)
Translates to: WDLSPPGSGTLKLPPFSLVLWEP*LWRSSI
Trigger: GATGGAGCTCCTCCACAGCAACGGCTCCCAAAGGAC...AAGAGAGAAAGGAGGTAGTTTAAGAGTCCCTGACCCTGGAGGACTGAGATCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254850.11
ENST00000355035.9
CDS GCA 90 bp GAGGTGGCCCTTTCAAAAATGGATTTCCTCTCCTGGGATTCAGCCTaGGAGTGCCTGGCCCCTCACCTTGATGGAAAGGATGGTCATTTT +
Preference number: 5 (lower is better)
Translates to: EVALSKMDFLSWDSA*ECLAPHLDGKDGHF
Trigger: AAAATGACCATCCTTTCCATCAAGGTGAGGGGCCAGGCACTCGCAGGCTGAATCCCAGGAGAGGAAATCCATTTTTGAAAGGGCCACCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355035.9
ENST00000574868.1
CDS GCA 90 bp TGCCCCAGCCCAGGCAACACAAACACTGTCCTCAGGCCCAGCCACTaGCCTAAATTCTCCAAGGTGTTTCTTCATTTATCACAGCACAAC +
Preference number: 5 (lower is better)
Translates to: CPSPGNTNTVLRPSH*PKFSKVFLHLSQHN
Trigger: GTTGTGCTGTGATAAATGAAGAAACACCTTGGAGAATTTAGGGCAGTGGCTGGGCCTGAGGACAGTGTTTGTGTTGCCTGGGCTGGGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574868.1
CDS-3UTR CAA 90 bp TCAACAGAGAAGCCAGAGCTGGGCAGGTGTGGGGTATGGGTTAGCCAGAGGTGTGAAGGGGTTCGTGTGTaGTACAATGAATTTCTGCTC +
Preference number: 5 (lower is better)
Translates to: STEKPELGRCGVWVSQRCEGVRV*YNEFLL
Trigger: GAGCAGAAATTCATTGTACAACACACGAACCCCTTC...ACACCTCTGGCTAACCCATACCCCACACCTGCCCAGCTCTGGCTTCTCTGTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254850.11
ENST00000355035.9
CDS-3UTR CAA 90 bp TGGGATCTCAGTCCTCCAGGGTCAGGGACTCTTAAACTACCTCCTTTCTCTCTTGCCTGGCCCCTCACCTaGATGGAAAGGATGGTCATT +
Preference number: 5 (lower is better)
Translates to: WDLSPPGSGTLKLPPFSLAWPLT*MERMVI
Trigger: AATGACCATCCTTTCCATCAAGGTGAGGGGCCAGGC...AAGAGAGAAAGGAGGTAGTTTAAGAGTCCCTGACCCTGGAGGACTGAGATCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355035.9
CDS-3UTR CAA 90 bp TGGGATCTCAGTCCTCCAGGGTCAGGGACTCTTAAACTACCTCCTTTCTCTCTTTTGCAGCTGTGCACTTaGGGACCCAGTCACACAGAT +
Preference number: 5 (lower is better)
Translates to: WDLSPPGSGTLKLPPFSLLQLCT*GPSHTD
Trigger: ATCTGTGTGACTGGGTCCCAAAGTGCACAGCTGCAA...AAGAGAGAAAGGAGGTAGTTTAAGAGTCCCTGACCCTGGAGGACTGAGATCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254850.11
CDS-3UTR CAA 90 bp CTCCAGGGTCAGGGACTCTTAAACTACCTCCTTTCTCTCTTTGCTCAGCTCTTCGTGCTCGAGGAGAAGTaGCTGAAAGCTTCCTTCAGG +
Preference number: 5 (lower is better)
Translates to: LQGQGLLNYLLSLFAQLFVLEEK*LKASFR
Trigger: CCTGAAGGAAGCTTTCAGCAACTTCTCCTCGAGCAC...GAAGAGCTGAGCAAAGAGAGAAAGGAGGTAGTTTAAGAGTCCCTGACCCTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254850.11
ENST00000355035.9
CDS-3UTR CAA 90 bp CTCAGTCCTCCAGGGTCAGGGACTCTTAAACTACCTCCTTTCTCTCTTTGCTCAGTGCTCGAGGAGAAGTaGCTGAAAGCTTCCTTCAGG +
Preference number: 5 (lower is better)
Translates to: LSPPGSGTLKLPPFSLCSVLEEK*LKASFR
Trigger: CCTGAAGGAAGCTTTCAGCAACTTCTCCTCGAGCAC...TGAGCAAAGAGAGAAAGGAGGTAGTTTAAGAGTCCCTGACCCTGGAGGACTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254850.11
ENST00000355035.9
CDS-3UTR CAA 90 bp TGGGATCTCAGTCCTCCAGGGTCAGGGACTCTTAAACTACCTCCTTTCTCTCTTAGATTCACGTGGAGGTaGATGGTGGGATGGAACGCA +
Preference number: 5 (lower is better)
Translates to: WDLSPPGSGTLKLPPFSLRFTWR*MVGWNA
Trigger: TGCGTTCCATCCCACCATCAACCTCCACGTGAATCT...AAGAGAGAAAGGAGGTAGTTTAAGAGTCCCTGACCCTGGAGGACTGAGATCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355035.9
CDS-3UTR CAA 90 bp GTCCTCCAGGGTCAGGGACTCTTAAACTACCTCCTTTCTCTCTTTGCTCAGCTCGAAGGGGTTCGTGTGTaGTACAATGAATTTCTGCTC +
Preference number: 5 (lower is better)
Translates to: VLQGQGLLNYLLSLFAQLEGVRV*YNEFLL
Trigger: GAGCAGAAATTCATTGTACAACACACGAACCCCTTC...GAGCTGAGCAAAGAGAGAAAGGAGGTAGTTTAAGAGTCCCTGACCCTGGAGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254850.11
ENST00000355035.9
CDS-3UTR CAA 90 bp CTCAGTCCTCCAGGGTCAGGGACTCTTAAACTACCTCCTTTCTCTCTTTGCTCAAGACCTATCCAGGTATaGAAGGGGTTCGTGTGTTGT +
Preference number: 5 (lower is better)
Translates to: LSPPGSGTLKLPPFSLCSRPIQV*KGFVCC
Trigger: ACAACACACGAACCCCTTCAATACCTGGATAGGTCT...TGAGCAAAGAGAGAAAGGAGGTAGTTTAAGAGTCCCTGACCCTGGAGGACTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254850.11
ENST00000355035.9
CDS-3UTR CAA 90 bp CATTTGTTTCTTCTTTCCTACGCCATTGAAGAGGCTGACGATTATAATAATTACGGGGCAGCAGGTCCTTaGGGAGCCGTTGCTGTGGAG +
Preference number: 5 (lower is better)
Translates to: HLFLLSYAIEEADDYNNYGAAGP*GAVAVE
Trigger: CTCCACAGCAACGGCTCCCAAAGGACCTGCTGCCCC...GTAATTATTATAATCGTCAGCCTCTTCAATGGCGTAGGAAAGAAGAAACAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254850.11
ENST00000355035.9
CDS-3UTR CAA 90 bp CTCCAGGGTCAGGGACTCTTAAACTACCTCCTTTCTCTCTTTGCTCAGCTCTTCTTCTTTCCTACGCCATaGAAGAGGCTGACGATTATA +
Preference number: 5 (lower is better)
Translates to: LQGQGLLNYLLSLFAQLFFFPTP*KRLTII
Trigger: TATAATCGTCAGCCTCTTCAATGGCGTAGGAAAGAA...GAAGAGCTGAGCAAAGAGAGAAAGGAGGTAGTTTAAGAGTCCCTGACCCTGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254850.11
ENST00000355035.9
CDS-3UTR CAA 90 bp TGGGATCTCAGTCCTCCAGGGTCAGGGACTCTTAAACTACCTCCTTTCTCTCTTTTCTTTCCTACGCCATaGAAGAGGCTGACGATTATA +
Preference number: 5 (lower is better)
Translates to: WDLSPPGSGTLKLPPFSLFFPTP*KRLTII
Trigger: TATAATCGTCAGCCTCTTCAATGGCGTAGGAAAGAA...AAGAGAGAAAGGAGGTAGTTTAAGAGTCCCTGACCCTGGAGGACTGAGATCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254850.11
ENST00000355035.9
CDS-3UTR CAA 90 bp ATTATAATAATTACAATGAATTACAGAAGGAGGTGGGATCTCAGTCCTCCAGGGTGCTGTTTCTCCAGCTaGGCTCCTAGGGATGTGATC +
Preference number: 5 (lower is better)
Translates to: IIIITMNYRRRWDLSPPGCCFSS*APRDVI
Trigger: GATCACATCCCTAGGAGCCAAGCTGGAGAAACAGCA...CCCTGGAGGACTGAGATCCCACCTCCTTCTGTAATTCATTGTAATTATTATAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254850.11
ENST00000355035.9
CDS-3UTR CAA 90 bp TCCTACGCCATTGAAGAGGCTGACGATTATAATAATTACAATGAATTACAGAAGGGCAGGAGGTGGCCCTaGATGGAAAGGATGGTCATT +
Preference number: 5 (lower is better)
Translates to: SYAIEEADDYNNYNELQKGRRWP*MERMVI
Trigger: AATGACCATCCTTTCCATCAAGGGCCACCTCCTGCC...CTTCTGTAATTCATTGTAATTATTATAATCGTCAGCCTCTTCAATGGCGTAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254850.11
CDS-3UTR CAA 90 bp ATTATAATAATTACAATGAATTACAGAAGGAGGTGGGATCTCAGTCCTCCAGGGCAGCTGCTGGATATCTaGAAAGTCCTTGGCCATGAT +
Preference number: 5 (lower is better)
Translates to: IIIITMNYRRRWDLSPPGQLLDI*KVLGHD
Trigger: ATCATGGCCAAGGACTTTCAAGATATCCAGCAGCTG...CCCTGGAGGACTGAGATCCCACCTCCTTCTGTAATTCATTGTAATTATTATAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254850.11
ENST00000355035.9
CDS-3UTR CAA 90 bp TACGCCATTGAAGAGGCTGACGATTATAATAATTACAATGAATTACAGAAGGAGTGCTGTTTCTCCAGCTaGGCTCCTAGGGATGTGATC +
Preference number: 5 (lower is better)
Translates to: YAIEEADDYNNYNELQKECCFSS*APRDVI
Trigger: GATCACATCCCTAGGAGCCAAGCTGGAGAAACAGCA...CTCCTTCTGTAATTCATTGTAATTATTATAATCGTCAGCCTCTTCAATGGCGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254850.11
ENST00000355035.9
CDS-3UTR CAA 90 bp CATTTGTTTCTTCTTTCCTACGCCATTGAAGAGGCTGACGATTATAATAATTACCAGCTGCTGGATATCTaGAAAGTCCTTGGCCATGAT +
Preference number: 5 (lower is better)
Translates to: HLFLLSYAIEEADDYNNYQLLDI*KVLGHD
Trigger: ATCATGGCCAAGGACTTTCAAGATATCCAGCAGCTG...GTAATTATTATAATCGTCAGCCTCTTCAATGGCGTAGGAAAGAAGAAACAAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254850.11
ENST00000355035.9
CDS CCA 72 bp GTCCTTTGGGAGCCGTTGCTGTGGAGGAGCTCCATCTaGCAGGCCACGAAGCGCAGGTCCACGGGGAAGTGC +
Preference number: 6 (lower is better)
Translates to: VLWEPLLWRSSI*QATKRRSTGKC
Trigger: GCACTTCCCCGTGGACCTGCGCTTCGTGGCCTGCCAGATGGAGCTCCTCCACAGCAACGGCTCCCAAAGGAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254850.11
ENST00000355035.9
ENST00000446679.6
CDS CCA 72 bp AGCCAGAGGTGTGCTGGGGTCAGGCCACCTCGCCGGTaGCATTCCGCCTTTTCTCACACACCCAGCGGTACA +
Preference number: 6 (lower is better)
Translates to: SQRCAGVRPPRR*HSAFSHTPSGT
Trigger: TGTACCGCTGGGTGTGTGAGAAAAGGCGGAATGCCACCGGCGAGGTGGCCTGACCCCAGCACACCTCTGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254850.11
ENST00000355035.9
CDS CCA 72 bp CAGAGGTGCAGATTCACGTGGAGGTTGATGGTGGGATaGAACGCAGGGTCGGAGGGGTTCGGGGTGGTGGCC +
Preference number: 6 (lower is better)
Translates to: QRCRFTWRLMVG*NAGSEGFGVVA
Trigger: GGCCACCACCCCGAACCCCTCCGACCCTGCGTTCCATCCCACCATCAACCTCCACGTGAATCTGCACCTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355035.9
ENST00000450034.7
ENST00000576487.5
CDS CCA 72 bp TTGTCACCCACGCTGCCTCCGTGGGTGCTGATTGCCTaGACCTCCGTCAGGGTGCTCGAGGAGAAGTTGCTG +
Preference number: 6 (lower is better)
Translates to: LSPTLPPWVLIA*TSVRVLEEKLL
Trigger: CAGCAACTTCTCCTCGAGCACCCTGACGGAGGTCCAGGCAATCAGCACCCACGGAGGCAGCGTGGGTGACAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254850.11
ENST00000355035.9
ENST00000446679.6
ENST00000450034.7
ENST00000574868.1
ENST00000576487.5
CDS GCA 72 bp GATCTTGTCACCCACGCTGCCTCCGTGGGTGCTGATTaGCTGGACCTCCGTCAGGGTGCTCGAGGAGAAGTT +
Preference number: 6 (lower is better)
Translates to: DLVTHAASVGAD*LDLRQGARGEV
Trigger: AACTTCTCCTCGAGCACCCTGACGGAGGTCCAGGCAATCAGCACCCACGGAGGCAGCGTGGGTGACAAGATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254850.11
ENST00000355035.9
ENST00000446679.6
ENST00000450034.7
ENST00000574868.1
ENST00000576487.5
CDS CCA 72 bp TCAACAGAGAAGCCAGAGCTGGGCAGGTGTGGGGTATaGGTTAGCCAGAGGTGTGCTGGGGTCAGGCCACCT +
Preference number: 6 (lower is better)
Translates to: STEKPELGRCGV*VSQRCAGVRPP
Trigger: AGGTGGCCTGACCCCAGCACACCTCTGGCTAACCCATACCCCACACCTGCCCAGCTCTGGCTTCTCTGTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254850.11
ENST00000355035.9
CDS CAA 90 bp TGGGTGCTGATTGCCTGGACCTCCGTCAGGGTGCTCGAGGAGAAGTaGCTGAAAGCTTCCTTCAGGCTCCGCAGCTCGGCTTGCAGCTGT +
Preference number: 6 (lower is better)
Translates to: WVLIAWTSVRVLEEK*LKASFRLRSSACSC
Trigger: ACAGCTGCAAGCCGAGCTGCGGAGCCTGAAGGAAGCTTTCAGCAACTTCTCCTCGAGCACCCTGACGGAGGTCCAGGCAATCAGCACCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254850.11
ENST00000355035.9
ENST00000446679.6
ENST00000450034.7
ENST00000574868.1
ENST00000576487.5
CDS CAA 72 bp ATTGCCTGGACCTCCGTCAGGGTGCTCGAGGAGAAGTaGCTGAAAGCTTCCTTCAGGCTCCGCAGCTCGGCT +
Preference number: 6 (lower is better)
Translates to: IAWTSVRVLEEK*LKASFRLRSSA
Trigger: AGCCGAGCTGCGGAGCCTGAAGGAAGCTTTCAGCAACTTCTCCTCGAGCACCCTGACGGAGGTCCAGGCAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254850.11
ENST00000355035.9
ENST00000446679.6
ENST00000450034.7
ENST00000574868.1
ENST00000576487.5
CDS TCA 72 bp CTGGGATTCAGCCTGCGAGTGCCTGGCCCCTCACCTTaGTGGAAAGGATGGTCATTTTCCTCCGAGCTCAGC +
Preference number: 6 (lower is better)
Translates to: LGFSLRVPGPSP*WKGWSFSSELS
Trigger: GCTGAGCTCGGAGGAAAATGACCATCCTTTCCATCAAGGTGAGGGGCCAGGCACTCGCAGGCTGAATCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355035.9
ENST00000574868.1
CDS CAA 72 bp CCTGGGATTCAGCCTGCGAGTGCCTGGCCCCTCACCTaGATGGAAAGGATGGTCATTTTCCTCCGAGCTCAG +
Preference number: 6 (lower is better)
Translates to: PGIQPASAWPLT*MERMVIFLRAQ
Trigger: CTGAGCTCGGAGGAAAATGACCATCCTTTCCATCAAGGTGAGGGGCCAGGCACTCGCAGGCTGAATCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355035.9
ENST00000574868.1
CDS CAA 72 bp TCCCTGACCAGGATCACAGCGACCAGTTCTCTACTCTaGCCCAATCCGGCATCTGAACCACAGACCCCAGCT +
Preference number: 6 (lower is better)
Translates to: SLTRITATSSLL*PNPASEPQTPA
Trigger: AGCTGGGGTCTGTGGTTCAGATGCCGGATTGGGCAAGAGTAGAGAACTGGTCGCTGTGATCCTGGTCAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574868.1
CDS CAA 90 bp ATGGAAAGGATGGTCATTTTCCTCCGAGCTCAGCTGCTGGATATCTaGAAAGTCCTTGGCCATGATGGGGCCCGGGCTGGAGCTGGAGCT +
Preference number: 6 (lower is better)
Translates to: MERMVIFLRAQLLDI*KVLGHDGARAGAGA
Trigger: AGCTCCAGCTCCAGCCCGGGCCCCATCATGGCCAAGGACTTTCAAGATATCCAGCAGCTGAGCTCGGAGGAAAATGACCATCCTTTCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254850.11
ENST00000355035.9
ENST00000450034.7
ENST00000574868.1
ENST00000576487.5
CDS TCA 72 bp AGAGATGAGGCAACTTGCTCTAGGTGGTGGCCCAGGTaGGTAGAGAAACTGAGGTCAGGAGTTCGAGACCAG +
Preference number: 6 (lower is better)
Translates to: RDEATCSRWWPR*VEKLRSGVRDQ
Trigger: CTGGTCTCGAACTCCTGACCTCAGTTTCTCTACTCACCTGGGCCACCACCTAGAGCAAGTTGCCTCATCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574868.1
CDS CCA 72 bp TTCACTTCCACCCAGCTCGTGCCCGTGCCAATTATCTaGCTGAGTGACAGCCCAGTTCTTGTAGTTGTGCCT +
Preference number: 6 (lower is better)
Translates to: FTSTQLVPVPII*LSDSPVLVVVP
Trigger: AGGCACAACTACAAGAACTGGGCTGTCACTCAGCCAGATAATTGGCACGGGCACGAGCTGGGTGGAAGTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254850.11
ENST00000355035.9
ENST00000446679.6
CDS GCA 72 bp AAAATGGATTTCCTCTCCTGGGATTCAGCCTGCGAGTaGCTGGCCCCTCACCTTGATGGAAAGGATGGTCAT +
Preference number: 6 (lower is better)
Translates to: KMDFLSWDSACE*LAPHLDGKDGH
Trigger: ATGACCATCCTTTCCATCAAGGTGAGGGGCCAGGCACTCGCAGGCTGAATCCCAGGAGAGGAAATCCATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355035.9
ENST00000574868.1
CDS CAA 90 bp ACCCATTTCCAAGAGCCATCACTGTCCGTGAGACCTATCCAGGTATaGAAGGGGTTCGTGTGTTGTACAATGAATTTCTGCTCCTCCCAG +
Preference number: 6 (lower is better)
Translates to: THFQEPSLSVRPIQV*KGFVCCTMNFCSSQ
Trigger: CTGGGAGGAGCAGAAATTCATTGTACAACACACGAACCCCTTCAATACCTGGATAGGTCTCACGGACAGTGATGGCTCTTGGAAATGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254850.11
ENST00000355035.9
ENST00000446679.6
CDS GCA 72 bp CCAGGCAACACAAACACTGTCCTCAGGCCCAGCCACTaGCCTAAATTCTCCAAGGTGTTTCTTCATTTATCA +
Preference number: 6 (lower is better)
Translates to: PGNTNTVLRPSH*PKFSKVFLHLS
Trigger: TGATAAATGAAGAAACACCTTGGAGAATTTAGGGCAGTGGCTGGGCCTGAGGACAGTGTTTGTGTTGCCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574868.1
CDS CAA 72 bp CGTGAGACCTATCCAGGTATTGAAGGGGTTCGTGTGTaGTACAATGAATTTCTGCTCCTCCCAGGAGTTGAT +
Preference number: 6 (lower is better)
Translates to: RETYPGIEGVRV*YNEFLLLPGVD
Trigger: ATCAACTCCTGGGAGGAGCAGAAATTCATTGTACAACACACGAACCCCTTCAATACCTGGATAGGTCTCACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254850.11
ENST00000355035.9
ENST00000446679.6
CDS CAA 72 bp CAAGAGCCATCACTGTCCGTGAGACCTATCCAGGTATaGAAGGGGTTCGTGTGTTGTACAATGAATTTCTGC +
Preference number: 6 (lower is better)
Translates to: QEPSLSVRPIQV*KGFVCCTMNFC
Trigger: GCAGAAATTCATTGTACAACACACGAACCCCTTCAATACCTGGATAGGTCTCACGGACAGTGATGGCTCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254850.11
ENST00000355035.9
ENST00000446679.6