RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ASGR1 (Homo sapiens)

Ensembl gene IDs: ENSG00000141505

Ensembl transcript IDs: ENST00000269299.8, ENST00000380920.8, ENST00000570576.1, ENST00000572879.5, ENST00000573083.1, ENST00000573596.1, ENST00000574330.5, ENST00000574388.5, ENST00000619926.4

Found 196 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCCCGTGGCCGTACCAGTCGTCCGGCTGCTCCGGCCTCCAGTTCCTaGGGACAGAGCCAGCTGTGGGCCCCAGGAGGTCGGATCCGCAGG +
Preference number: 1 (lower is better)
Translates to: ARGRTSRPAAPASSS*GQSQLWAPGGRIRR
Trigger: CCTGCGGATCCGACCTCCTGGGGCCCACAGCTGGCTCTGTCCCCAGGAACTGGAGGCCGGAGCAGCCGGACGACTGGTACGGCCACGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574330.5
3UTR TCA 90 bp ATGGGCGGATTCCCAATCCCGGACCCCTGCGGCAGGTCGAGGCATTaGAGAAATAAATTAAAGGAGAGGTGGCTCCTGGCTGGCCTTGTC +
Preference number: 1 (lower is better)
Translates to: MGGFPIPDPCGRSRH*RNKLKERWLLAGLV
Trigger: GACAAGGCCAGCCAGGAGCCACCTCTCCTTTAATTTATTTCTTCAATGCCTCGACCTGCCGCAGGGGTCCGGGATTGGGAATCCGCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574330.5
3UTR-3UTR CCA 90 bp CGCCACGGGTTTCAAGCTCCTCACCTTCGGAACATCACCCTATCCTTCCCCTTCGAAGAGGCCCCCAGATaGGCGGATTCCCAATCCCGG +
Preference number: 2 (lower is better)
Translates to: RHGFQAPHLRNITLSFPFEEAPR*ADSQSR
Trigger: CCGGGATTGGGAATCCGCCCATCTGGGGGCCTCTTC...GAAGGGGAAGGATAGGGTGATGTTCCGAAGGTGAGGAGCTTGAAACCCGTGGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269299.8
ENST00000619926.4
3UTR-3UTR GCA 90 bp CCCCCAGATGGGCGGATTCCCAATCCCGGACCCCTGCGGCAGGTCGAGGCATTGTTCACAATGATAACCTaGAAACTGCAGAAAGCGCCA +
Preference number: 2 (lower is better)
Translates to: PPDGRIPNPGPLRQVEALFTMIT*KLQKAP
Trigger: TGGCGCTTTCTGCAGTTTGCAGGTTATCATTGTGAA...CAATGCCTCGACCTGCCGCAGGGGTCCGGGATTGGGAATCCGCCCATCTGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269299.8
ENST00000619926.4
3UTR-3UTR CCA 90 bp ACAATGATAACCTGCAAACTGCAGAAAGCGCCACGGGTTTCAAGCTCCTCACCTGAAGAGGCCCCCAGATaGGCGGATTCCCAATCCCGG +
Preference number: 2 (lower is better)
Translates to: TMITCKLQKAPRVSSSSPEEAPR*ADSQSR
Trigger: CCGGGATTGGGAATCCGCCCATCTGGGGGCCTCTTC...AGGTGAGGAGCTTGAAACCCGTGGCGCTTTCTGCAGTTTGCAGGTTATCATTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269299.8
ENST00000619926.4
3UTR TCA 72 bp TTCCCAATCCCGGACCCCTGCGGCAGGTCGAGGCATTaGAGAAATAAATTAAAGGAGAGGTGGCTCCTGGCT +
Preference number: 3 (lower is better)
Translates to: FPIPDPCGRSRH*RNKLKERWLLA
Trigger: AGCCAGGAGCCACCTCTCCTTTAATTTATTTCTTCAATGCCTCGACCTGCCGCAGGGGTCCGGGATTGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574330.5
CDS-3UTR TCA 90 bp TGGGCCCCAGGAGGTCGGATCCGCAGGCGGGTCGCTCCAGACTCCTCAGCCCAGGCTCCTCCCAGGACGTaGCCACCACCAGGTGCGCGT +
Preference number: 4 (lower is better)
Translates to: WAPGGRIRRRVAPDSSAQAPPRT*PPPGAR
Trigger: ACGCGCACCTGGTGGTGGTCACGTCCTGGGAGGAGC...CTGGGCTGAGGAGTCTGGAGCGACCCGCCTGCGGATCCGACCTCCTGGGGCCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574330.5
CDS-3UTR TCA 90 bp GGGCCCCAGGAGGTCGGATCCGCAGGCGGGTCGCTCCAGACTCCTCAGCCCAGGGGGCGCGCACTCACTTaGAGCCCGTCTCGTAGTCCG +
Preference number: 4 (lower is better)
Translates to: GPQEVGSAGGSLQTPQPRGRALT*SPSRSP
Trigger: CGGACTACGAGACGGGCTTCAAGTGAGTGCGCGCCC...CCTGGGCTGAGGAGTCTGGAGCGACCCGCCTGCGGATCCGACCTCCTGGGGCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574330.5
CDS-3UTR TCA 90 bp AGAGGCCCCCAGATGGGCGGATTCCCAATCCCGGACCCCTGCGGCAGGTCGAGGGGGTGCTCAAGCCCTTaGCCTGGGCCTCCGTGCTCG +
Preference number: 4 (lower is better)
Translates to: RGPQMGGFPIPDPCGRSRGCSSP*PGPPCS
Trigger: CGAGCACGGAGGCCCAGGTCAAGGGCTTGAGCACCC...CCTCGACCTGCCGCAGGGGTCCGGGATTGGGAATCCGCCCATCTGGGGGCCTCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000269299.8
ENST00000380920.8
ENST00000574330.5
ENST00000619926.4
CDS-3UTR GCA 90 bp AGAGGCCCCCAGATGGGCGGATTCCCAATCCCGGACCCCTGCGGCAGGTCGAGGGTGACCACCACCAGGTaGGCGTCCTCCAGCCGGCAG +
Preference number: 4 (lower is better)
Translates to: RGPQMGGFPIPDPCGRSRVTTTR*ASSSRQ
Trigger: CTGCCGGCTGGAGGACGCGCACCTGGTGGTGGTCAC...CCTCGACCTGCCGCAGGGGTCCGGGATTGGGAATCCGCCCATCTGGGGGCCTCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269299.8
ENST00000380920.8
ENST00000574330.5
ENST00000619926.4
CDS-3UTR CCA 90 bp GAAGAGGCCCCCAGATGGGCGGATTCCCAATCCCGGACCCCTGCGGCAGGTCGACCTCCTCCGAGCCCGTaGCCGTACCAGTCGTCCGGC +
Preference number: 4 (lower is better)
Translates to: EEAPRWADSQSRTPAAGRPPPSP*PYQSSG
Trigger: GCCGGACGACTGGTACGGCCACGGGCTCGGAGGAGG...TCGACCTGCCGCAGGGGTCCGGGATTGGGAATCCGCCCATCTGGGGGCCTCTTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269299.8
ENST00000380920.8
ENST00000574330.5
ENST00000619926.4
CDS-3UTR TCA 90 bp CCCCCAGATGGGCGGATTCCCAATCCCGGACCCCTGCGGCAGGTCGAGGCATTGTGGAGCGCCGCCATCTaGCAGCTCAGGCTCCGCAGG +
Preference number: 4 (lower is better)
Translates to: PPDGRIPNPGPLRQVEALWSAAI*QLRLRR
Trigger: CCTGCGGAGCCTGAGCTGTCAGATGGCGGCGCTCCA...CAATGCCTCGACCTGCCGCAGGGGTCCGGGATTGGGAATCCGCCCATCTGGGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269299.8
ENST00000380920.8
ENST00000574330.5
ENST00000619926.4
CDS-3UTR TCA 90 bp GCCCCCAGATGGGCGGATTCCCAATCCCGGACCCCTGCGGCAGGTCGAGGCATTTGGAGCGCCGCCATCTaGCAGCTCAGGCTCCGCAGG +
Preference number: 4 (lower is better)
Translates to: APRWADSQSRTPAAGRGIWSAAI*QLRLRR
Trigger: CCTGCGGAGCCTGAGCTGTCAGATGGCGGCGCTCCA...AATGCCTCGACCTGCCGCAGGGGTCCGGGATTGGGAATCCGCCCATCTGGGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269299.8
ENST00000380920.8
ENST00000574330.5
ENST00000619926.4
CDS-3UTR TCA 90 bp GAAGAGGCCCCCAGATGGGCGGATTCCCAATCCCGGACCCCTGCGGCAGGTCGAAGCGGCCGTCGTCGGTaGAGTGGGCACAGTCCTCGC +
Preference number: 4 (lower is better)
Translates to: EEAPRWADSQSRTPAAGRSGRRR*SGHSPR
Trigger: GCGAGGACTGTGCCCACTTCACCGACGACGGCCGCT...TCGACCTGCCGCAGGGGTCCGGGATTGGGAATCCGCCCATCTGGGGGCCTCTTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269299.8
ENST00000380920.8
ENST00000574330.5
ENST00000619926.4
CDS-3UTR TCA 90 bp AGCAGAAGAGGCCCCCAGATGGGCGGATTCCCAATCCCGGACCCCTGCGGCAGGAGCGGCCGTCGTCGGTaGAGTGGGCACAGTCCTCGC +
Preference number: 4 (lower is better)
Translates to: SRRGPQMGGFPIPDPCGRSGRRR*SGHSPR
Trigger: GCGAGGACTGTGCCCACTTCACCGACGACGGCCGCT...CCTGCCGCAGGGGTCCGGGATTGGGAATCCGCCCATCTGGGGGCCTCTTCTGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269299.8
ENST00000380920.8
ENST00000574330.5
ENST00000619926.4
CDS-3UTR GCA 90 bp GCCCCCAGATGGGCGGATTCCCAATCCCGGACCCCTGCGGCAGGTCGAGGCATTGTGACCACCACCAGGTaGGCGTCCTCCAGCCGGCAG +
Preference number: 4 (lower is better)
Translates to: APRWADSQSRTPAAGRGIVTTTR*ASSSRQ
Trigger: CTGCCGGCTGGAGGACGCGCACCTGGTGGTGGTCAC...AATGCCTCGACCTGCCGCAGGGGTCCGGGATTGGGAATCCGCCCATCTGGGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269299.8
ENST00000380920.8
ENST00000574330.5
ENST00000619926.4
CDS-3UTR GCA 90 bp CCCCCAGATGGGCGGATTCCCAATCCCGGACCCCTGCGGCAGGTCGAGGCATTGGTGACCACCACCAGGTaGGCGTCCTCCAGCCGGCAG +
Preference number: 4 (lower is better)
Translates to: PPDGRIPNPGPLRQVEALVTTTR*ASSSRQ
Trigger: CTGCCGGCTGGAGGACGCGCACCTGGTGGTGGTCAC...CAATGCCTCGACCTGCCGCAGGGGTCCGGGATTGGGAATCCGCCCATCTGGGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269299.8
ENST00000380920.8
ENST00000574330.5
ENST00000619926.4
CDS-3UTR CCA 90 bp GAGGCCCCCAGATGGGCGGATTCCCAATCCCGGACCCCTGCGGCAGGTCGAGGCTCCATAGGAGGGCCCTaGGCCCCGGTGTCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: EAPRWADSQSRTPAAGRGSIGGP*APVSLC
Trigger: ACACAGAGACACCGGGGCCCAGGGCCCTCCTATGGA...GCCTCGACCTGCCGCAGGGGTCCGGGATTGGGAATCCGCCCATCTGGGGGCCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269299.8
ENST00000619926.4
CDS-3UTR TCA 90 bp AGGCCCCCAGATGGGCGGATTCCCAATCCCGGACCCCTGCGGCAGGTCGAGGCAGCAGCAGGTCCTTTCTaGGCCATTGCCCTGGAGCGC +
Preference number: 4 (lower is better)
Translates to: RPPDGRIPNPGPLRQVEAAAGPF*AIALER
Trigger: GCGCTCCAGGGCAATGGCTCAGAAAGGACCTGCTGC...TGCCTCGACCTGCCGCAGGGGTCCGGGATTGGGAATCCGCCCATCTGGGGGCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269299.8
ENST00000380920.8
ENST00000574330.5
ENST00000619926.4
CDS-3UTR TCA 90 bp TCCTCCGAGCCCGTGGCCGTACCAGTCGTCCGGCTGCTCCGGCCTCCAGTTCCTGCAGCAGGTCCTTTCTaGGCCATTGCCCTGGAGCGC +
Preference number: 4 (lower is better)
Translates to: SSEPVAVPVVRLLRPPVPAAGPF*AIALER
Trigger: GCGCTCCAGGGCAATGGCTCAGAAAGGACCTGCTGC...AGGAACTGGAGGCCGGAGCAGCCGGACGACTGGTACGGCCACGGGCTCGGAGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574330.5
CDS-3UTR CCA 90 bp GAGGCCCCCAGATGGGCGGATTCCCAATCCCGGACCCCTGCGGCAGGTCGAGGCCTTGGAGAATGGGGGTaGGCGGACAGCCGTGGACAA +
Preference number: 4 (lower is better)
Translates to: EAPRWADSQSRTPAAGRGLGEWG*ADSRGQ
Trigger: TTGTCCACGGCTGTCCGCCCACCCCCATTCTCCAAG...GCCTCGACCTGCCGCAGGGGTCCGGGATTGGGAATCCGCCCATCTGGGGGCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000269299.8
ENST00000619926.4
CDS-3UTR CCA 90 bp GCTGTGGGCCCCAGGAGGTCGGATCCGCAGGCGGGTCGCTCCAGACTCCTCAGCTTCCAGGGCCCGTTTTaGTCGTGGAGGCCCATCCAG +
Preference number: 4 (lower is better)
Translates to: AVGPRRSDPQAGRSRLLSFQGPF*SWRPIQ
Trigger: CTGGATGGGCCTCCACGACCAAAACGGGCCCTGGAA...GCTGAGGAGTCTGGAGCGACCCGCCTGCGGATCCGACCTCCTGGGGCCCACAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574330.5
CDS-3UTR CCA 90 bp AAAGCAGAAGAGGCCCCCAGATGGGCGGATTCCCAATCCCGGACCCCTGCGGCACCTCCTCCGAGCCCGTaGCCGTACCAGTCGTCCGGC +
Preference number: 4 (lower is better)
Translates to: KAEEAPRWADSQSRTPAAPPPSP*PYQSSG
Trigger: GCCGGACGACTGGTACGGCCACGGGCTCGGAGGAGG...TGCCGCAGGGGTCCGGGATTGGGAATCCGCCCATCTGGGGGCCTCTTCTGCTTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269299.8
ENST00000380920.8
ENST00000574330.5
ENST00000619926.4
CDS-3UTR CCA 90 bp GAGGCCCCCAGATGGGCGGATTCCCAATCCCGGACCCCTGCGGCAGGTCGAGGCGAGGTGGCTCCTGGCTaGCCTTGTCCAGCTCTGTCT +
Preference number: 4 (lower is better)
Translates to: EAPRWADSQSRTPAAGRGEVAPG*PCPALS
Trigger: AGACAGAGCTGGACAAGGCCAGCCAGGAGCCACCTC...GCCTCGACCTGCCGCAGGGGTCCGGGATTGGGAATCCGCCCATCTGGGGGCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269299.8
ENST00000380920.8
ENST00000574330.5
ENST00000619926.4
CDS-3UTR TCA 90 bp CCCAGATGGGCGGATTCCCAATCCCGGACCCCTGCGGCAGGTCGAGGCATTGAATGGAGCGCCGCCATCTaGCAGCTCAGGCTCCGCAGG +
Preference number: 4 (lower is better)
Translates to: PRWADSQSRTPAAGRGIEWSAAI*QLRLRR
Trigger: CCTGCGGAGCCTGAGCTGTCAGATGGCGGCGCTCCA...TTCAATGCCTCGACCTGCCGCAGGGGTCCGGGATTGGGAATCCGCCCATCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269299.8
ENST00000380920.8
ENST00000574330.5
ENST00000619926.4
CDS-3UTR TCA 90 bp AAAGCAGAAGAGGCCCCCAGATGGGCGGATTCCCAATCCCGGACCCCTGCGGCAGCTCCTCCCAGGACGTaGCCACCACCAGGTGCGCGT +
Preference number: 4 (lower is better)
Translates to: KAEEAPRWADSQSRTPAAAPPRT*PPPGAR
Trigger: ACGCGCACCTGGTGGTGGTCACGTCCTGGGAGGAGC...TGCCGCAGGGGTCCGGGATTGGGAATCCGCCCATCTGGGGGCCTCTTCTGCTTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269299.8
ENST00000380920.8
ENST00000574330.5
ENST00000619926.4
CDS-3UTR TCA 90 bp CCCAGATGGGCGGATTCCCAATCCCGGACCCCTGCGGCAGGTCGAGGCATTGAAAGCGGCCGTCGTCGGTaGAGTGGGCACAGTCCTCGC +
Preference number: 4 (lower is better)
Translates to: PRWADSQSRTPAAGRGIESGRRR*SGHSPR
Trigger: GCGAGGACTGTGCCCACTTCACCGACGACGGCCGCT...TTCAATGCCTCGACCTGCCGCAGGGGTCCGGGATTGGGAATCCGCCCATCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269299.8
ENST00000380920.8
ENST00000574330.5
ENST00000619926.4
CDS-3UTR GCA 90 bp GAGGCCCCCAGATGGGCGGATTCCCAATCCCGGACCCCTGCGGCAGGTCGAGGCTCCTTTCTGAGCCATTaGCCTGGAGCGCCGCCATCT +
Preference number: 4 (lower is better)
Translates to: EAPRWADSQSRTPAAGRGSFLSH*PGAPPS
Trigger: AGATGGCGGCGCTCCAGGGCAATGGCTCAGAAAGGA...GCCTCGACCTGCCGCAGGGGTCCGGGATTGGGAATCCGCCCATCTGGGGGCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269299.8
ENST00000380920.8
ENST00000574330.5
ENST00000619926.4
CDS-3UTR CCA 90 bp GAAGAGGCCCCCAGATGGGCGGATTCCCAATCCCGGACCCCTGCGGCAGGTCGAGAGGGGGCTGAAGCTTaGAGAATGGGGGTGGGCGGA +
Preference number: 4 (lower is better)
Translates to: EEAPRWADSQSRTPAAGREGAEA*RMGVGG
Trigger: TCCGCCCACCCCCATTCTCCAAGCTTCAGCCCCCTC...TCGACCTGCCGCAGGGGTCCGGGATTGGGAATCCGCCCATCTGGGGGCCTCTTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000269299.8
ENST00000619926.4
CDS-3UTR CCA 90 bp GCCCCCAGATGGGCGGATTCCCAATCCCGGACCCCTGCGGCAGGTCGAGGCATTCTCAAGCCCTTGACCTaGGCCTCCGTGCTCGCTGTG +
Preference number: 4 (lower is better)
Translates to: APRWADSQSRTPAAGRGILKPLT*ASVLAV
Trigger: CACAGCGAGCACGGAGGCCCAGGTCAAGGGCTTGAG...AATGCCTCGACCTGCCGCAGGGGTCCGGGATTGGGAATCCGCCCATCTGGGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269299.8
ENST00000380920.8
ENST00000574330.5
ENST00000619926.4
CDS-3UTR CCA 90 bp CCCCCAGATGGGCGGATTCCCAATCCCGGACCCCTGCGGCAGGTCGAGGCATTGCTCAAGCCCTTGACCTaGGCCTCCGTGCTCGCTGTG +
Preference number: 4 (lower is better)
Translates to: PPDGRIPNPGPLRQVEALLKPLT*ASVLAV
Trigger: CACAGCGAGCACGGAGGCCCAGGTCAAGGGCTTGAG...CAATGCCTCGACCTGCCGCAGGGGTCCGGGATTGGGAATCCGCCCATCTGGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269299.8
ENST00000380920.8
ENST00000574330.5
ENST00000619926.4
CDS-3UTR CCA 90 bp AGCAGAAGAGGCCCCCAGATGGGCGGATTCCCAATCCCGGACCCCTGCGGCAGGCCGTCGTCGGTGAAGTaGGCACAGTCCTCGCCTCCT +
Preference number: 4 (lower is better)
Translates to: SRRGPQMGGFPIPDPCGRPSSVK*AQSSPP
Trigger: AGGAGGCGAGGACTGTGCCCACTTCACCGACGACGG...CCTGCCGCAGGGGTCCGGGATTGGGAATCCGCCCATCTGGGGGCCTCTTCTGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269299.8
ENST00000380920.8
ENST00000574330.5
ENST00000619926.4
CDS-3UTR CCA 90 bp GCAGAAGAGGCCCCCAGATGGGCGGATTCCCAATCCCGGACCCCTGCGGCAGGTGAAGAGGCCCCCAGATaGGCGGATTCCCAATCCCGG +
Preference number: 4 (lower is better)
Translates to: AEEAPRWADSQSRTPAAGEEAPR*ADSQSR
Trigger: CCGGGATTGGGAATCCGCCCATCTGGGGGCCTCTTC...ACCTGCCGCAGGGGTCCGGGATTGGGAATCCGCCCATCTGGGGGCCTCTTCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000269299.8
ENST00000380920.8
ENST00000574330.5
ENST00000619926.4
CDS-3UTR CCA 90 bp GCCCCCAGATGGGCGGATTCCCAATCCCGGACCCCTGCGGCAGGTCGAGGCATTGAAGAGGCCCCCAGATaGGCGGATTCCCAATCCCGG +
Preference number: 4 (lower is better)
Translates to: APRWADSQSRTPAAGRGIEEAPR*ADSQSR
Trigger: CCGGGATTGGGAATCCGCCCATCTGGGGGCCTCTTC...AATGCCTCGACCTGCCGCAGGGGTCCGGGATTGGGAATCCGCCCATCTGGGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000269299.8
ENST00000380920.8
ENST00000574330.5
ENST00000619926.4
CDS-3UTR GCA 90 bp GAGGCCCCCAGATGGGCGGATTCCCAATCCCGGACCCCTGCGGCAGGTCGAGGCTCAGTGCTGTGCAGATaGCGAACTAAGGAGGGGGCT +
Preference number: 4 (lower is better)
Translates to: EAPRWADSQSRTPAAGRGSVLCR*RTKEGA
Trigger: AGCCCCCTCCTTAGTTCGGCATCTGCACAGCACTGA...GCCTCGACCTGCCGCAGGGGTCCGGGATTGGGAATCCGCCCATCTGGGGGCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000269299.8
ENST00000619926.4
CDS-3UTR GCA 90 bp GCCCCCAGATGGGCGGATTCCCAATCCCGGACCCCTGCGGCAGGTCGAGGCATTTACCAGTCGTCCGGCTaGTCCGGCCTCCAGTTCTTG +
Preference number: 4 (lower is better)
Translates to: APRWADSQSRTPAAGRGIYQSSG*SGLQFL
Trigger: CAAGAACTGGAGGCCGGAGCAGCCGGACGACTGGTA...AATGCCTCGACCTGCCGCAGGGGTCCGGGATTGGGAATCCGCCCATCTGGGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269299.8
ENST00000380920.8
ENST00000619926.4
CDS-3UTR GCA 90 bp GCAGAAGAGGCCCCCAGATGGGCGGATTCCCAATCCCGGACCCCTGCGGCAGGTTACCAGTCGTCCGGCTaGTCCGGCCTCCAGTTCTTG +
Preference number: 4 (lower is better)
Translates to: AEEAPRWADSQSRTPAAGYQSSG*SGLQFL
Trigger: CAAGAACTGGAGGCCGGAGCAGCCGGACGACTGGTA...ACCTGCCGCAGGGGTCCGGGATTGGGAATCCGCCCATCTGGGGGCCTCTTCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269299.8
ENST00000380920.8
ENST00000619926.4
CDS-3UTR CCA 90 bp GCCCCCAGATGGGCGGATTCCCAATCCCGGACCCCTGCGGCAGGTCGAGGCATTCCCACATTGCCTCCCTaGGTGCTCAAGCCCTTGACC +
Preference number: 4 (lower is better)
Translates to: APRWADSQSRTPAAGRGIPTLPP*VLKPLT
Trigger: GGTCAAGGGCTTGAGCACCCAGGGAGGCAATGTGGG...AATGCCTCGACCTGCCGCAGGGGTCCGGGATTGGGAATCCGCCCATCTGGGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269299.8
ENST00000380920.8
ENST00000574330.5
ENST00000619926.4
CDS-3UTR CCA 90 bp CCCCCAGATGGGCGGATTCCCAATCCCGGACCCCTGCGGCAGGTCGAGGCATTGCCCACATTGCCTCCCTaGGTGCTCAAGCCCTTGACC +
Preference number: 4 (lower is better)
Translates to: PPDGRIPNPGPLRQVEALPTLPP*VLKPLT
Trigger: GGTCAAGGGCTTGAGCACCCAGGGAGGCAATGTGGG...CAATGCCTCGACCTGCCGCAGGGGTCCGGGATTGGGAATCCGCCCATCTGGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269299.8
ENST00000380920.8
ENST00000574330.5
ENST00000619926.4
CDS-3UTR CCA 90 bp CCCCCAGATGGGCGGATTCCCAATCCCGGACCCCTGCGGCAGGTCGAGGCATTGGGCCCGTTTTGGTCGTaGAGGCCCATCCAGGTGTTC +
Preference number: 4 (lower is better)
Translates to: PPDGRIPNPGPLRQVEALGPFWS*RPIQVF
Trigger: GAACACCTGGATGGGCCTCCACGACCAAAACGGGCC...CAATGCCTCGACCTGCCGCAGGGGTCCGGGATTGGGAATCCGCCCATCTGGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000269299.8
ENST00000380920.8
ENST00000574330.5
ENST00000619926.4
CDS-3UTR CCA 90 bp GCAGAAGAGGCCCCCAGATGGGCGGATTCCCAATCCCGGACCCCTGCGGCAGGTTTCCAGGGCCCGTTTTaGTCGTGGAGGCCCATCCAG +
Preference number: 4 (lower is better)
Translates to: AEEAPRWADSQSRTPAAGFQGPF*SWRPIQ
Trigger: CTGGATGGGCCTCCACGACCAAAACGGGCCCTGGAA...ACCTGCCGCAGGGGTCCGGGATTGGGAATCCGCCCATCTGGGGGCCTCTTCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000269299.8
ENST00000380920.8
ENST00000574330.5
ENST00000619926.4
CDS-3UTR CCA 90 bp CCCCCAGATGGGCGGATTCCCAATCCCGGACCCCTGCGGCAGGTCGAGGCATTGCAAGCACGCCAAACGTaGCATCTCCAGTGCCCGGGA +
Preference number: 4 (lower is better)
Translates to: PPDGRIPNPGPLRQVEALQARQT*HLQCPG
Trigger: TCCCGGGCACTGGAGATGCCACGTTTGGCGTGCTTG...CAATGCCTCGACCTGCCGCAGGGGTCCGGGATTGGGAATCCGCCCATCTGGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000619926.4
CDS-3UTR GCA 90 bp CTGTGGGCCCCAGGAGGTCGGATCCGCAGGCGGGTCGCTCCAGACTCCTCAGCCTCTTTCTTCCCACATTaGCTCCCTGGGTGCTCAAGC +
Preference number: 4 (lower is better)
Translates to: LWAPGGRIRRRVAPDSSASFFPH*LPGCSS
Trigger: GCTTGAGCACCCAGGGAGGCAATGTGGGAAGAAAGA...GGCTGAGGAGTCTGGAGCGACCCGCCTGCGGATCCGACCTCCTGGGGCCCACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574330.5
CDS-3UTR GCA 90 bp AGAGGCCCCCAGATGGGCGGATTCCCAATCCCGGACCCCTGCGGCAGGTCGAGGACGTGGCATCTCCAGTaGCCGGGACTTTGGACAGTA +
Preference number: 4 (lower is better)
Translates to: RGPQMGGFPIPDPCGRSRTWHLQ*PGLWTV
Trigger: TACTGTCCAAAGTCCCGGGCACTGGAGATGCCACGT...CCTCGACCTGCCGCAGGGGTCCGGGATTGGGAATCCGCCCATCTGGGGGCCTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000619926.4
CDS-3UTR CCA 90 bp CCCGAGAAAGCAGAAGAGGCCCCCAGATGGGCGGATTCCCAATCCCGGACCCCTCTCAAGCCCTTGACCTaGGCCTCCGTGCTCGCTGTG +
Preference number: 4 (lower is better)
Translates to: PEKAEEAPRWADSQSRTPLKPLT*ASVLAV
Trigger: CACAGCGAGCACGGAGGCCCAGGTCAAGGGCTTGAG...AGGGGTCCGGGATTGGGAATCCGCCCATCTGGGGGCCTCTTCTGCTTTCTCGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269299.8
ENST00000380920.8
ENST00000574330.5
ENST00000619926.4
CDS-3UTR CCA 90 bp GGGCCCCAGGAGGTCGGATCCGCAGGCGGGTCGCTCCAGACTCCTCAGCCCAGGTGCTGTTTCTCCAGCTaGGACTCTAGCGACTTCATC +
Preference number: 4 (lower is better)
Translates to: GPQEVGSAGGSLQTPQPRCCFSS*DSSDFI
Trigger: GATGAAGTCGCTAGAGTCCCAGCTGGAGAAACAGCA...CCTGGGCTGAGGAGTCTGGAGCGACCCGCCTGCGGATCCGACCTCCTGGGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574330.5
CDS-3UTR CCA 90 bp GAGGTCGGATCCGCAGGCGGGTCGCTCCAGACTCCTCAGCCCAGGGCCCCAGGGAAATTAAAGGAGAGGTaGCTCCTGGCTGGCCTTGTC +
Preference number: 4 (lower is better)
Translates to: EVGSAGGSLQTPQPRAPGKLKER*LLAGLV
Trigger: GACAAGGCCAGCCAGGAGCCACCTCTCCTTTAATTT...CCCTGGGGCCCTGGGCTGAGGAGTCTGGAGCGACCCGCCTGCGGATCCGACCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574330.5
CDS-3UTR TCA 90 bp TGGGCGGATTCCCAATCCCGGACCCCTGCGGCAGGTCGAGGCATTGAAGAAATAGCTCCTCCCAGGACGTaGCCACCACCAGGTGCGCGT +
Preference number: 4 (lower is better)
Translates to: WADSQSRTPAAGRGIEEIAPPRT*PPPGAR
Trigger: ACGCGCACCTGGTGGTGGTCACGTCCTGGGAGGAGC...TATTTCTTCAATGCCTCGACCTGCCGCAGGGGTCCGGGATTGGGAATCCGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269299.8
ENST00000380920.8
ENST00000574330.5
ENST00000619926.4
CDS-3UTR TCA 90 bp TGGGCGGATTCCCAATCCCGGACCCCTGCGGCAGGTCGAGGCATTGAAGAAATAAGCGGCCGTCGTCGGTaGAGTGGGCACAGTCCTCGC +
Preference number: 4 (lower is better)
Translates to: WADSQSRTPAAGRGIEEISGRRR*SGHSPR
Trigger: GCGAGGACTGTGCCCACTTCACCGACGACGGCCGCT...TATTTCTTCAATGCCTCGACCTGCCGCAGGGGTCCGGGATTGGGAATCCGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269299.8
ENST00000380920.8
ENST00000574330.5
ENST00000619926.4
CDS-3UTR GCA 90 bp AGGCCCCCAGATGGGCGGATTCCCAATCCCGGACCCCTGCGGCAGGTCGAGGCATCTTTCTTCCCACATTaGCTCCCTGGGTGCTCAAGC +
Preference number: 4 (lower is better)
Translates to: RPPDGRIPNPGPLRQVEASFFPH*LPGCSS
Trigger: GCTTGAGCACCCAGGGAGGCAATGTGGGAAGAAAGA...TGCCTCGACCTGCCGCAGGGGTCCGGGATTGGGAATCCGCCCATCTGGGGGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269299.8
ENST00000380920.8
ENST00000574330.5
ENST00000619926.4
CDS-3UTR GCA 90 bp GCAGAAGAGGCCCCCAGATGGGCGGATTCCCAATCCCGGACCCCTGCGGCAGGTAGGTCAGACACGAACTaGTTCACGTGGAGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: AEEAPRWADSQSRTPAAGRSDTN*FTWSSR
Trigger: CCTGCTGCTCCACGTGAAGCAGTTCGTGTCTGACCT...ACCTGCCGCAGGGGTCCGGGATTGGGAATCCGCCCATCTGGGGGCCTCTTCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269299.8
ENST00000380920.8
ENST00000574330.5
ENST00000619926.4
CDS-3UTR CCA 90 bp TGGGCGGATTCCCAATCCCGGACCCCTGCGGCAGGTCGAGGCATTGAAGAAATAGTGGGCGGACAGCCGTaGACAATGGGAGGGGAGCGG +
Preference number: 4 (lower is better)
Translates to: WADSQSRTPAAGRGIEEIVGGQP*TMGGER
Trigger: CCGCTCCCCTCCCATTGTCCACGGCTGTCCGCCCAC...TATTTCTTCAATGCCTCGACCTGCCGCAGGGGTCCGGGATTGGGAATCCGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269299.8
ENST00000619926.4
CDS-3UTR CCA 90 bp TCCCGAGAAAGCAGAAGAGGCCCCCAGATGGGCGGATTCCCAATCCCGGACCCCCTGAAGCTTGGAGAATaGGGGTGGGCGGACAGCCGT +
Preference number: 4 (lower is better)
Translates to: SRESRRGPQMGGFPIPDPLKLGE*GWADSR
Trigger: ACGGCTGTCCGCCCACCCCCATTCTCCAAGCTTCAG...GGGGTCCGGGATTGGGAATCCGCCCATCTGGGGGCCTCTTCTGCTTTCTCGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000269299.8
ENST00000619926.4
CDS-3UTR CCA 90 bp CCCCCAGATGGGCGGATTCCCAATCCCGGACCCCTGCGGCAGGTCGAGGCATTGCGTGGAGCAGCAGGCTaGAGTGATCTTCACTCAGGT +
Preference number: 4 (lower is better)
Translates to: PPDGRIPNPGPLRQVEALRGAAG*SDLHSG
Trigger: ACCTGAGTGAAGATCACTCCAGCCTGCTGCTCCACG...CAATGCCTCGACCTGCCGCAGGGGTCCGGGATTGGGAATCCGCCCATCTGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269299.8
ENST00000380920.8
ENST00000574330.5
ENST00000619926.4
CDS-3UTR CCA 90 bp TCCCGAGAAAGCAGAAGAGGCCCCCAGATGGGCGGATTCCCAATCCCGGACCCCGGCCCGTTTTGGTCGTaGAGGCCCATCCAGGTGTTC +
Preference number: 4 (lower is better)
Translates to: SRESRRGPQMGGFPIPDPGPFWS*RPIQVF
Trigger: GAACACCTGGATGGGCCTCCACGACCAAAACGGGCC...GGGGTCCGGGATTGGGAATCCGCCCATCTGGGGGCCTCTTCTGCTTTCTCGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000269299.8
ENST00000380920.8
ENST00000574330.5
ENST00000619926.4
CDS-3UTR CCA 90 bp CCCGAGAAAGCAGAAGAGGCCCCCAGATGGGCGGATTCCCAATCCCGGACCCCTGGCCCGTTTTGGTCGTaGAGGCCCATCCAGGTGTTC +
Preference number: 4 (lower is better)
Translates to: PEKAEEAPRWADSQSRTPGPFWS*RPIQVF
Trigger: GAACACCTGGATGGGCCTCCACGACCAAAACGGGCC...AGGGGTCCGGGATTGGGAATCCGCCCATCTGGGGGCCTCTTCTGCTTTCTCGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000269299.8
ENST00000380920.8
ENST00000574330.5
ENST00000619926.4
CDS-3UTR CCA 90 bp CCCAGATGGGCGGATTCCCAATCCCGGACCCCTGCGGCAGGTCGAGGCATTGAAGAGGTGGCTCCTGGCTaGCCTTGTCCAGCTCTGTCT +
Preference number: 4 (lower is better)
Translates to: PRWADSQSRTPAAGRGIEEVAPG*PCPALS
Trigger: AGACAGAGCTGGACAAGGCCAGCCAGGAGCCACCTC...TTCAATGCCTCGACCTGCCGCAGGGGTCCGGGATTGGGAATCCGCCCATCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269299.8
ENST00000380920.8
ENST00000574330.5
ENST00000619926.4
CDS-3UTR GCA 90 bp GCCCCCAGATGGGCGGATTCCCAATCCCGGACCCCTGCGGCAGGTCGAGGCATTTCTTTCTTCCCACATTaGCTCCCTGGGTGCTCAAGC +
Preference number: 4 (lower is better)
Translates to: APRWADSQSRTPAAGRGISFFPH*LPGCSS
Trigger: GCTTGAGCACCCAGGGAGGCAATGTGGGAAGAAAGA...AATGCCTCGACCTGCCGCAGGGGTCCGGGATTGGGAATCCGCCCATCTGGGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269299.8
ENST00000380920.8
ENST00000574330.5
ENST00000619926.4
CDS-3UTR GCA 90 bp AGATGGGCGGATTCCCAATCCCGGACCCCTGCGGCAGGTCGAGGCATTGAAGAAGGGATGGGTTGCCTCTaGTCTGCTCCCCAGGGAGGA +
Preference number: 4 (lower is better)
Translates to: RWADSQSRTPAAGRGIEEGMGCL*SAPQGG
Trigger: TCCTCCCTGGGGAGCAGAGCAGAGGCAACCCATCCC...TTCTTCAATGCCTCGACCTGCCGCAGGGGTCCGGGATTGGGAATCCGCCCATCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619926.4
CDS-3UTR CCA 90 bp AATTCCCGAGAAAGCAGAAGAGGCCCCCAGATGGGCGGATTCCCAATCCCGGACGACAGCCGTGGACAATaGGAGGGGAGCGGGCAGGGT +
Preference number: 4 (lower is better)
Translates to: NSRESRRGPQMGGFPIPDDSRGQ*EGSGQG
Trigger: ACCCTGCCCGCTCCCCTCCCATTGTCCACGGCTGTC...GTCCGGGATTGGGAATCCGCCCATCTGGGGGCCTCTTCTGCTTTCTCGGGAATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269299.8
ENST00000619926.4
CDS-3UTR CCA 90 bp ATTCCCGAGAAAGCAGAAGAGGCCCCCAGATGGGCGGATTCCCAATCCCGGACCGAGGGGGCTGAAGCTTaGAGAATGGGGGTGGGCGGA +
Preference number: 4 (lower is better)
Translates to: IPEKAEEAPRWADSQSRTEGAEA*RMGVGG
Trigger: TCCGCCCACCCCCATTCTCCAAGCTTCAGCCCCCTC...GGTCCGGGATTGGGAATCCGCCCATCTGGGGGCCTCTTCTGCTTTCTCGGGAAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000269299.8
ENST00000619926.4
CDS-3UTR TCA 90 bp CCCAGATGGGCGGATTCCCAATCCCGGACCCCTGCGGCAGGTCGAGGCATTGAAGGCCCTTTTCTGAGCTaGTGGTGGTCACTCTCCTCA +
Preference number: 4 (lower is better)
Translates to: PRWADSQSRTPAAGRGIEGPFLS*WWSLSS
Trigger: TGAGGAGAGTGACCACCATCAGCTCAGAAAAGGGCC...TTCAATGCCTCGACCTGCCGCAGGGGTCCGGGATTGGGAATCCGCCCATCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269299.8
CDS-3UTR GCA 90 bp GCAGAAGAGGCCCCCAGATGGGCGGATTCCCAATCCCGGACCCCTGCGGCAGGTACAGGGCCTATGTGGTaGTGGACAAATTTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: AEEAPRWADSQSRTPAAGTGPMW*WTNFCS
Trigger: GGAGCAGAAATTTGTCCAGCACCACATAGGCCCTGT...ACCTGCCGCAGGGGTCCGGGATTGGGAATCCGCCCATCTGGGGGCCTCTTCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269299.8
ENST00000380920.8
ENST00000574330.5
ENST00000619926.4
CDS-3UTR GCA 90 bp CCCCCAGATGGGCGGATTCCCAATCCCGGACCCCTGCGGCAGGTCGAGGCATTGACAGGGCCTATGTGGTaGTGGACAAATTTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: PPDGRIPNPGPLRQVEALTGPMW*WTNFCS
Trigger: GGAGCAGAAATTTGTCCAGCACCACATAGGCCCTGT...CAATGCCTCGACCTGCCGCAGGGGTCCGGGATTGGGAATCCGCCCATCTGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269299.8
ENST00000380920.8
ENST00000574330.5
ENST00000619926.4
CDS-3UTR GCA 90 bp ATTCCCGAGAAAGCAGAAGAGGCCCCCAGATGGGCGGATTCCCAATCCCGGACCCCCCGCAGCTCCTCCTaGAGCTGGGAGTCTTTTCTG +
Preference number: 4 (lower is better)
Translates to: IPEKAEEAPRWADSQSRTPRSSS*SWESFL
Trigger: CAGAAAAGACTCCCAGCTGCAGGAGGAGCTGCGGGG...GGTCCGGGATTGGGAATCCGCCCATCTGGGGGCCTCTTCTGCTTTCTCGGGAAT
61% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000619926.4
CDS-3UTR GCA 90 bp AAAGCAGAAGAGGCCCCCAGATGGGCGGATTCCCAATCCCGGACCCCTGCGGCAGGAGGAGAATCGTGTTaGCCCCACACATGCCAGTCA +
Preference number: 4 (lower is better)
Translates to: KAEEAPRWADSQSRTPAAGGESC*PHTCQS
Trigger: TGACTGGCATGTGTGGGGGCAACACGATTCTCCTCC...TGCCGCAGGGGTCCGGGATTGGGAATCCGCCCATCTGGGGGCCTCTTCTGCTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000619926.4
CDS-3UTR CCA 90 bp CCAGATGGGCGGATTCCCAATCCCGGACCCCTGCGGCAGGTCGAGGCATTGAAGAGCTCCTCCTGCAGCTaGGAGTTTTGGGATCCGATC +
Preference number: 4 (lower is better)
Translates to: PDGRIPNPGPLRQVEALKSSSCS*EFWDPI
Trigger: GATCGGATCCCAAAACTCCCAGCTGCAGGAGGAGCT...CTTCAATGCCTCGACCTGCCGCAGGGGTCCGGGATTGGGAATCCGCCCATCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269299.8
ENST00000380920.8
CDS-3UTR CCA 90 bp AGATGGGCGGATTCCCAATCCCGGACCCCTGCGGCAGGTCGAGGCATTGAAGAACCCACATTGCCTCCCTaGGTGCTCAAGCCCTTGACC +
Preference number: 4 (lower is better)
Translates to: RWADSQSRTPAAGRGIEEPTLPP*VLKPLT
Trigger: GGTCAAGGGCTTGAGCACCCAGGGAGGCAATGTGGG...TTCTTCAATGCCTCGACCTGCCGCAGGGGTCCGGGATTGGGAATCCGCCCATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269299.8
ENST00000380920.8
ENST00000574330.5
ENST00000619926.4
CDS-3UTR CCA 90 bp CCCCCAGATGGGCGGATTCCCAATCCCGGACCCCTGCGGCAGGTCGAGGCATTGTGCTGTTTCTCCAGCTaGGACTCTAGCGACTTCATC +
Preference number: 4 (lower is better)
Translates to: PPDGRIPNPGPLRQVEALCCFSS*DSSDFI
Trigger: GATGAAGTCGCTAGAGTCCCAGCTGGAGAAACAGCA...CAATGCCTCGACCTGCCGCAGGGGTCCGGGATTGGGAATCCGCCCATCTGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269299.8
ENST00000380920.8
ENST00000574330.5
ENST00000619926.4
CDS-3UTR CCA 90 bp CCAGATGGGCGGATTCCCAATCCCGGACCCCTGCGGCAGGTCGAGGCATTGAAGCGTGGAGCAGCAGGCTaGAGTGATCTTCACTCAGGT +
Preference number: 4 (lower is better)
Translates to: PDGRIPNPGPLRQVEALKRGAAG*SDLHSG
Trigger: ACCTGAGTGAAGATCACTCCAGCCTGCTGCTCCACG...CTTCAATGCCTCGACCTGCCGCAGGGGTCCGGGATTGGGAATCCGCCCATCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269299.8
ENST00000380920.8
ENST00000574330.5
ENST00000619926.4
CDS-3UTR CCA 90 bp AATTCCCGAGAAAGCAGAAGAGGCCCCCAGATGGGCGGATTCCCAATCCCGGACCCGTCGTCGGTGAAGTaGGCACAGTCCTCGCCTCCT +
Preference number: 4 (lower is better)
Translates to: NSRESRRGPQMGGFPIPDPSSVK*AQSSPP
Trigger: AGGAGGCGAGGACTGTGCCCACTTCACCGACGACGG...GTCCGGGATTGGGAATCCGCCCATCTGGGGGCCTCTTCTGCTTTCTCGGGAATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269299.8
ENST00000380920.8
ENST00000574330.5
ENST00000619926.4
CDS-3UTR CCA 90 bp ATTCCCGAGAAAGCAGAAGAGGCCCCCAGATGGGCGGATTCCCAATCCCGGACCGAGGTGGCTCCTGGCTaGCCTTGTCCAGCTCTGTCT +
Preference number: 4 (lower is better)
Translates to: IPEKAEEAPRWADSQSRTEVAPG*PCPALS
Trigger: AGACAGAGCTGGACAAGGCCAGCCAGGAGCCACCTC...GGTCCGGGATTGGGAATCCGCCCATCTGGGGGCCTCTTCTGCTTTCTCGGGAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269299.8
ENST00000380920.8
ENST00000574330.5
ENST00000619926.4
CDS-3UTR CCA 90 bp CCCCCAGATGGGCGGATTCCCAATCCCGGACCCCTGCGGCAGGTCGAGGCATTGAAATTAAAGGAGAGGTaGCTCCTGGCTGGCCTTGTC +
Preference number: 4 (lower is better)
Translates to: PPDGRIPNPGPLRQVEALKLKER*LLAGLV
Trigger: GACAAGGCCAGCCAGGAGCCACCTCTCCTTTAATTT...CAATGCCTCGACCTGCCGCAGGGGTCCGGGATTGGGAATCCGCCCATCTGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269299.8
ENST00000380920.8
ENST00000574330.5
ENST00000619926.4
CDS-3UTR CCA 90 bp TGGGCGGATTCCCAATCCCGGACCCCTGCGGCAGGTCGAGGCATTGAAGAAATAGAAGAGGCCCCCAGATaGGCGGATTCCCAATCCCGG +
Preference number: 4 (lower is better)
Translates to: WADSQSRTPAAGRGIEEIEEAPR*ADSQSR
Trigger: CCGGGATTGGGAATCCGCCCATCTGGGGGCCTCTTC...TATTTCTTCAATGCCTCGACCTGCCGCAGGGGTCCGGGATTGGGAATCCGCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269299.8
ENST00000380920.8
ENST00000574330.5
ENST00000619926.4
CDS-3UTR TCA 90 bp CCAGATGGGCGGATTCCCAATCCCGGACCCCTGCGGCAGGTCGAGGCATTGAAGGCTGGGAGTCTTTTCTaGGCTGATGGTGGTCACTCT +
Preference number: 4 (lower is better)
Translates to: PDGRIPNPGPLRQVEALKAGSLF*ADGGHS
Trigger: AGAGTGACCACCATCAGCTCAGAAAAGACTCCCAGC...CTTCAATGCCTCGACCTGCCGCAGGGGTCCGGGATTGGGAATCCGCCCATCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619926.4
CDS-3UTR CCA 90 bp AATTCCCGAGAAAGCAGAAGAGGCCCCCAGATGGGCGGATTCCCAATCCCGGACGGCCCGTTTTGGTCGTaGAGGCCCATCCAGGTGTTC +
Preference number: 4 (lower is better)
Translates to: NSRESRRGPQMGGFPIPDGPFWS*RPIQVF
Trigger: GAACACCTGGATGGGCCTCCACGACCAAAACGGGCC...GTCCGGGATTGGGAATCCGCCCATCTGGGGGCCTCTTCTGCTTTCTCGGGAATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269299.8
ENST00000380920.8
ENST00000574330.5
ENST00000619926.4
CDS-3UTR CCA 90 bp ATGATAACCTGCAAACTGCAGAAAGCGCCACGGGTTTCAAGCTCCTCACCTTCGCCTCCTCCGAGCCCGTaGCCGTACCAGTCGTCCGGC +
Preference number: 4 (lower is better)
Translates to: MITCKLQKAPRVSSSSPSPPPSP*PYQSSG
Trigger: GCCGGACGACTGGTACGGCCACGGGCTCGGAGGAGG...CGAAGGTGAGGAGCTTGAAACCCGTGGCGCTTTCTGCAGTTTGCAGGTTATCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269299.8
ENST00000619926.4
CDS-3UTR CCA 90 bp GCCACGGGTTTCAAGCTCCTCACCTTCGGAACATCACCCTATCCTTCCCCTTCCCCGTCGTCGGTGAAGTaGGCACAGTCCTCGCCTCCT +
Preference number: 4 (lower is better)
Translates to: ATGFKLLTFGTSPYPSPSPSSVK*AQSSPP
Trigger: AGGAGGCGAGGACTGTGCCCACTTCACCGACGACGG...GGAAGGGGAAGGATAGGGTGATGTTCCGAAGGTGAGGAGCTTGAAACCCGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269299.8
ENST00000619926.4
CDS-3UTR TCA 90 bp CACGGGTTTCAAGCTCCTCACCTTCGGAACATCACCCTATCCTTCCCCTTCCCTGCAGCAGGTCCTTTCTaGGCCATTGCCCTGGAGCGC +
Preference number: 4 (lower is better)
Translates to: HGFQAPHLRNITLSFPFPAAGPF*AIALER
Trigger: GCGCTCCAGGGCAATGGCTCAGAAAGGACCTGCTGC...AGGGAAGGGGAAGGATAGGGTGATGTTCCGAAGGTGAGGAGCTTGAAACCCGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269299.8
ENST00000619926.4
CDS-3UTR TCA 90 bp ATGATAACCTGCAAACTGCAGAAAGCGCCACGGGTTTCAAGCTCCTCACCTTCGGCTCCTCCCAGGACGTaGCCACCACCAGGTGCGCGT +
Preference number: 4 (lower is better)
Translates to: MITCKLQKAPRVSSSSPSAPPRT*PPPGAR
Trigger: ACGCGCACCTGGTGGTGGTCACGTCCTGGGAGGAGC...CGAAGGTGAGGAGCTTGAAACCCGTGGCGCTTTCTGCAGTTTGCAGGTTATCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269299.8
ENST00000619926.4
CDS-3UTR GCA 90 bp AAAGCAGAAGAGGCCCCCAGATGGGCGGATTCCCAATCCCGGACCCCTGCGGCAGGTTCTTCAGTGCTGTaGAGATGCCGAACTAAGGAG +
Preference number: 4 (lower is better)
Translates to: KAEEAPRWADSQSRTPAAGSSVL*RCRTKE
Trigger: CTCCTTAGTTCGGCATCTGCACAGCACTGAAGAACC...TGCCGCAGGGGTCCGGGATTGGGAATCCGCCCATCTGGGGGCCTCTTCTGCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269299.8
ENST00000619926.4
CDS-3UTR GCA 90 bp AGATGGGCGGATTCCCAATCCCGGACCCCTGCGGCAGGTCGAGGCATTGAAGAAAGGTCAGACACGAACTaGTTCACGTGGAGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: RWADSQSRTPAAGRGIEERSDTN*FTWSSR
Trigger: CCTGCTGCTCCACGTGAAGCAGTTCGTGTCTGACCT...TTCTTCAATGCCTCGACCTGCCGCAGGGGTCCGGGATTGGGAATCCGCCCATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269299.8
ENST00000380920.8
ENST00000574330.5
ENST00000619926.4
CDS-3UTR GCA 90 bp AATTCCCGAGAAAGCAGAAGAGGCCCCCAGATGGGCGGATTCCCAATCCCGGACTCCTTTCTGAGCCATTaGCCTGGAGCGCCGCCATCT +
Preference number: 4 (lower is better)
Translates to: NSRESRRGPQMGGFPIPDSFLSH*PGAPPS
Trigger: AGATGGCGGCGCTCCAGGGCAATGGCTCAGAAAGGA...GTCCGGGATTGGGAATCCGCCCATCTGGGGGCCTCTTCTGCTTTCTCGGGAATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269299.8
ENST00000380920.8
ENST00000574330.5
ENST00000619926.4
CDS-3UTR GCA 90 bp TGGGCGGATTCCCAATCCCGGACCCCTGCGGCAGGTCGAGGCATTGAAGAAATATCCTTTCTGAGCCATTaGCCTGGAGCGCCGCCATCT +
Preference number: 4 (lower is better)
Translates to: WADSQSRTPAAGRGIEEISFLSH*PGAPPS
Trigger: AGATGGCGGCGCTCCAGGGCAATGGCTCAGAAAGGA...TATTTCTTCAATGCCTCGACCTGCCGCAGGGGTCCGGGATTGGGAATCCGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269299.8
ENST00000380920.8
ENST00000574330.5
ENST00000619926.4
CDS-3UTR GCA 90 bp ATGATAACCTGCAAACTGCAGAAAGCGCCACGGGTTTCAAGCTCCTCACCTTCGGTGACCACCACCAGGTaGGCGTCCTCCAGCCGGCAG +
Preference number: 4 (lower is better)
Translates to: MITCKLQKAPRVSSSSPSVTTTR*ASSSRQ
Trigger: CTGCCGGCTGGAGGACGCGCACCTGGTGGTGGTCAC...CGAAGGTGAGGAGCTTGAAACCCGTGGCGCTTTCTGCAGTTTGCAGGTTATCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269299.8
ENST00000619926.4
CDS-3UTR GCA 90 bp CCCGAGAAAGCAGAAGAGGCCCCCAGATGGGCGGATTCCCAATCCCGGACCCCTACAGGGCCTATGTGGTaGTGGACAAATTTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: PEKAEEAPRWADSQSRTPTGPMW*WTNFCS
Trigger: GGAGCAGAAATTTGTCCAGCACCACATAGGCCCTGT...AGGGGTCCGGGATTGGGAATCCGCCCATCTGGGGGCCTCTTCTGCTTTCTCGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269299.8
ENST00000380920.8
ENST00000574330.5
ENST00000619926.4
CDS-3UTR GCA 90 bp GCGCCACGGGTTTCAAGCTCCTCACCTTCGGAACATCACCCTATCCTTCCCCTTGGGTTGCCTCTGCTCTaGTCCCCAGGGAGGAGAATC +
Preference number: 4 (lower is better)
Translates to: APRVSSSSPSEHHPILPLGLPLL*SPGRRI
Trigger: GATTCTCCTCCCTGGGGAGCAGAGCAGAGGCAACCC...AAGGGGAAGGATAGGGTGATGTTCCGAAGGTGAGGAGCTTGAAACCCGTGGCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619926.4
CDS-3UTR CCA 90 bp GCAAACTGCAGAAAGCGCCACGGGTTTCAAGCTCCTCACCTTCGGAACATCACCCTCAAGCCCTTGACCTaGGCCTCCGTGCTCGCTGTG +
Preference number: 4 (lower is better)
Translates to: ANCRKRHGFQAPHLRNITLKPLT*ASVLAV
Trigger: CACAGCGAGCACGGAGGCCCAGGTCAAGGGCTTGAG...GGTGATGTTCCGAAGGTGAGGAGCTTGAAACCCGTGGCGCTTTCTGCAGTTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269299.8
ENST00000619926.4
CDS-3UTR CCA 90 bp GCGCCACGGGTTTCAAGCTCCTCACCTTCGGAACATCACCCTATCCTTCCCCTTCCCACATTGCCTCCCTaGGTGCTCAAGCCCTTGACC +
Preference number: 4 (lower is better)
Translates to: APRVSSSSPSEHHPILPLPTLPP*VLKPLT
Trigger: GGTCAAGGGCTTGAGCACCCAGGGAGGCAATGTGGG...AAGGGGAAGGATAGGGTGATGTTCCGAAGGTGAGGAGCTTGAAACCCGTGGCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269299.8
ENST00000619926.4
CDS-3UTR CCA 90 bp AAAGCAGAAGAGGCCCCCAGATGGGCGGATTCCCAATCCCGGACCCCTGCGGCATGCTGTTTCTCCAGCTaGGACTCTAGCGACTTCATC +
Preference number: 4 (lower is better)
Translates to: KAEEAPRWADSQSRTPAACCFSS*DSSDFI
Trigger: GATGAAGTCGCTAGAGTCCCAGCTGGAGAAACAGCA...TGCCGCAGGGGTCCGGGATTGGGAATCCGCCCATCTGGGGGCCTCTTCTGCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269299.8
ENST00000380920.8
ENST00000574330.5
ENST00000619926.4
CDS-3UTR TCA 90 bp AATTCCCGAGAAAGCAGAAGAGGCCCCCAGATGGGCGGATTCCCAATCCCGGACCAGGGTCTCAGGGTCTaGTTCCCAGGTTCTTCAGTG +
Preference number: 4 (lower is better)
Translates to: NSRESRRGPQMGGFPIPDQGLRV*FPGSSV
Trigger: CACTGAAGAACCTGGGAATCAGACCCTGAGACCCTG...GTCCGGGATTGGGAATCCGCCCATCTGGGGGCCTCTTCTGCTTTCTCGGGAATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269299.8
ENST00000619926.4
CDS-3UTR TCA 90 bp CCCCCAGATGGGCGGATTCCCAATCCCGGACCCCTGCGGCAGGTCGAGGCATTGGGCAGGTCGAGGCATTaGAGAAATAAATTAAAGGAG +
Preference number: 4 (lower is better)
Translates to: PPDGRIPNPGPLRQVEALGRSRH*RNKLKE
Trigger: CTCCTTTAATTTATTTCTTCAATGCCTCGACCTGCC...CAATGCCTCGACCTGCCGCAGGGGTCCGGGATTGGGAATCCGCCCATCTGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269299.8
ENST00000380920.8
ENST00000574330.5
ENST00000619926.4
CDS-3UTR GCA 90 bp TGGGCGGATTCCCAATCCCGGACCCCTGCGGCAGGTCGAGGCATTGAAGAAATAAGGTCAGACACGAACTaGTTCACGTGGAGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: WADSQSRTPAAGRGIEEIRSDTN*FTWSSR
Trigger: CCTGCTGCTCCACGTGAAGCAGTTCGTGTCTGACCT...TATTTCTTCAATGCCTCGACCTGCCGCAGGGGTCCGGGATTGGGAATCCGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269299.8
ENST00000380920.8
ENST00000574330.5
ENST00000619926.4
CDS-3UTR GCA 90 bp CGCCACGGGTTTCAAGCTCCTCACCTTCGGAACATCACCCTATCCTTCCCCTTCTCCTTTCTGAGCCATTaGCCTGGAGCGCCGCCATCT +
Preference number: 4 (lower is better)
Translates to: RHGFQAPHLRNITLSFPFSFLSH*PGAPPS
Trigger: AGATGGCGGCGCTCCAGGGCAATGGCTCAGAAAGGA...GAAGGGGAAGGATAGGGTGATGTTCCGAAGGTGAGGAGCTTGAAACCCGTGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269299.8
ENST00000619926.4
CDS-3UTR CCA 90 bp CACGGGTTTCAAGCTCCTCACCTTCGGAACATCACCCTATCCTTCCCCTTCCCTCTTGGAGAATGGGGGTaGGCGGACAGCCGTGGACAA +
Preference number: 4 (lower is better)
Translates to: HGFQAPHLRNITLSFPFPLGEWG*ADSRGQ
Trigger: TTGTCCACGGCTGTCCGCCCACCCCCATTCTCCAAG...AGGGAAGGGGAAGGATAGGGTGATGTTCCGAAGGTGAGGAGCTTGAAACCCGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269299.8
ENST00000619926.4
CDS-3UTR CCA 90 bp AAAGCGCCACGGGTTTCAAGCTCCTCACCTTCGGAACATCACCCTATCCTTCCCCTGAAGCTTGGAGAATaGGGGTGGGCGGACAGCCGT +
Preference number: 4 (lower is better)
Translates to: KAPRVSSSSPSEHHPILPLKLGE*GWADSR
Trigger: ACGGCTGTCCGCCCACCCCCATTCTCCAAGCTTCAG...GGGAAGGATAGGGTGATGTTCCGAAGGTGAGGAGCTTGAAACCCGTGGCGCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269299.8
ENST00000619926.4
CDS-3UTR CCA 90 bp AAAGCGCCACGGGTTTCAAGCTCCTCACCTTCGGAACATCACCCTATCCTTCCCTTCCAGGGCCCGTTTTaGTCGTGGAGGCCCATCCAG +
Preference number: 4 (lower is better)
Translates to: KAPRVSSSSPSEHHPILPFQGPF*SWRPIQ
Trigger: CTGGATGGGCCTCCACGACCAAAACGGGCCCTGGAA...GGGAAGGATAGGGTGATGTTCCGAAGGTGAGGAGCTTGAAACCCGTGGCGCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269299.8
ENST00000619926.4
CDS-3UTR GCA 90 bp ATTCCCGAGAAAGCAGAAGAGGCCCCCAGATGGGCGGATTCCCAATCCCGGACCACAGGGCCTATGTGGTaGTGGACAAATTTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: IPEKAEEAPRWADSQSRTTGPMW*WTNFCS
Trigger: GGAGCAGAAATTTGTCCAGCACCACATAGGCCCTGT...GGTCCGGGATTGGGAATCCGCCCATCTGGGGGCCTCTTCTGCTTTCTCGGGAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269299.8
ENST00000380920.8
ENST00000574330.5
ENST00000619926.4
CDS-3UTR CCA 90 bp ATGATAACCTGCAAACTGCAGAAAGCGCCACGGGTTTCAAGCTCCTCACCTTCGTCCATAGGAGGGCCCTaGGCCCCGGTGTCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: MITCKLQKAPRVSSSSPSSIGGP*APVSLC
Trigger: ACACAGAGACACCGGGGCCCAGGGCCCTCCTATGGA...CGAAGGTGAGGAGCTTGAAACCCGTGGCGCTTTCTGCAGTTTGCAGGTTATCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269299.8
ENST00000619926.4
CDS-3UTR CCA 90 bp GGTTTCAAGCTCCTCACCTTCGGAACATCACCCTATCCTTCCCCTTCCCTTAAAGACAGCCGTGGACAATaGGAGGGGAGCGGGCAGGGT +
Preference number: 4 (lower is better)
Translates to: GFKLLTFGTSPYPSPSLKDSRGQ*EGSGQG
Trigger: ACCCTGCCCGCTCCCCTCCCATTGTCCACGGCTGTC...TTTAAGGGAAGGGGAAGGATAGGGTGATGTTCCGAAGGTGAGGAGCTTGAAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269299.8
ENST00000619926.4
CDS-3UTR CCA 90 bp ACGGGTTTCAAGCTCCTCACCTTCGGAACATCACCCTATCCTTCCCCTTCCCTTGGGCTGGGGAGGAGGTaGCCCTTTTCTGAGCTGATG +
Preference number: 4 (lower is better)
Translates to: TGFKLLTFGTSPYPSPSLGLGRR*PFSELM
Trigger: CATCAGCTCAGAAAAGGGCCACCTCCTCCCCAGCCC...AAGGGAAGGGGAAGGATAGGGTGATGTTCCGAAGGTGAGGAGCTTGAAACCCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000269299.8
CDS-3UTR CCA 90 bp ATTCCCGAGAAAGCAGAAGAGGCCCCCAGATGGGCGGATTCCCAATCCCGGACCTGCAGCTGGGAGTTTTaGGATCCGATCACACAGACA +
Preference number: 4 (lower is better)
Translates to: IPEKAEEAPRWADSQSRTCSWEF*DPITQT
Trigger: TGTCTGTGTGATCGGATCCCAAAACTCCCAGCTGCA...GGTCCGGGATTGGGAATCCGCCCATCTGGGGGCCTCTTCTGCTTTCTCGGGAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269299.8
ENST00000380920.8
CDS-3UTR CCA 90 bp ACGGGTTTCAAGCTCCTCACCTTCGGAACATCACCCTATCCTTCCCCTTCCCTTTTCCAGGGCCCGTTTTaGTCGTGGAGGCCCATCCAG +
Preference number: 4 (lower is better)
Translates to: TGFKLLTFGTSPYPSPSLFQGPF*SWRPIQ
Trigger: CTGGATGGGCCTCCACGACCAAAACGGGCCCTGGAA...AAGGGAAGGGGAAGGATAGGGTGATGTTCCGAAGGTGAGGAGCTTGAAACCCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269299.8
ENST00000619926.4
CDS-3UTR CCA 90 bp AGATGGGCGGATTCCCAATCCCGGACCCCTGCGGCAGGTCGAGGCATTGAAGAAAAATTAAAGGAGAGGTaGCTCCTGGCTGGCCTTGTC +
Preference number: 4 (lower is better)
Translates to: RWADSQSRTPAAGRGIEEKLKER*LLAGLV
Trigger: GACAAGGCCAGCCAGGAGCCACCTCTCCTTTAATTT...TTCTTCAATGCCTCGACCTGCCGCAGGGGTCCGGGATTGGGAATCCGCCCATCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269299.8
ENST00000380920.8
ENST00000574330.5
ENST00000619926.4
CDS-3UTR CCA 90 bp ATTCCCGAGAAAGCAGAAGAGGCCCCCAGATGGGCGGATTCCCAATCCCGGACCAAATTAAAGGAGAGGTaGCTCCTGGCTGGCCTTGTC +
Preference number: 4 (lower is better)
Translates to: IPEKAEEAPRWADSQSRTKLKER*LLAGLV
Trigger: GACAAGGCCAGCCAGGAGCCACCTCTCCTTTAATTT...GGTCCGGGATTGGGAATCCGCCCATCTGGGGGCCTCTTCTGCTTTCTCGGGAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269299.8
ENST00000380920.8
ENST00000574330.5
ENST00000619926.4
CDS-3UTR TCA 90 bp ACAATGATAACCTGCAAACTGCAGAAAGCGCCACGGGTTTCAAGCTCCTCACCTGCAGCAGGTCCTTTCTaGGCCATTGCCCTGGAGCGC +
Preference number: 4 (lower is better)
Translates to: TMITCKLQKAPRVSSSSPAAGPF*AIALER
Trigger: GCGCTCCAGGGCAATGGCTCAGAAAGGACCTGCTGC...AGGTGAGGAGCTTGAAACCCGTGGCGCTTTCTGCAGTTTGCAGGTTATCATTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269299.8
ENST00000619926.4
CDS-3UTR TCA 90 bp CCCGAGAAAGCAGAAGAGGCCCCCAGATGGGCGGATTCCCAATCCCGGACCCCTGGCAGGTCGAGGCATTaGAGAAATAAATTAAAGGAG +
Preference number: 4 (lower is better)
Translates to: PEKAEEAPRWADSQSRTPGRSRH*RNKLKE
Trigger: CTCCTTTAATTTATTTCTTCAATGCCTCGACCTGCC...AGGGGTCCGGGATTGGGAATCCGCCCATCTGGGGGCCTCTTCTGCTTTCTCGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269299.8
ENST00000380920.8
ENST00000574330.5
ENST00000619926.4
CDS-3UTR TCA 90 bp AAAGCAGAAGAGGCCCCCAGATGGGCGGATTCCCAATCCCGGACCCCTGCGGCAGGCAGGTCGAGGCATTaGAGAAATAAATTAAAGGAG +
Preference number: 4 (lower is better)
Translates to: KAEEAPRWADSQSRTPAAGRSRH*RNKLKE
Trigger: CTCCTTTAATTTATTTCTTCAATGCCTCGACCTGCC...TGCCGCAGGGGTCCGGGATTGGGAATCCGCCCATCTGGGGGCCTCTTCTGCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269299.8
ENST00000380920.8
ENST00000574330.5
ENST00000619926.4
CDS-3UTR CCA 90 bp CTGCAGAAAGCGCCACGGGTTTCAAGCTCCTCACCTTCGGAACATCACCCTATCCGTGGAGCAGCAGGCTaGAGTGATCTTCACTCAGGT +
Preference number: 4 (lower is better)
Translates to: LQKAPRVSSSSPSEHHPIRGAAG*SDLHSG
Trigger: ACCTGAGTGAAGATCACTCCAGCCTGCTGCTCCACG...GATAGGGTGATGTTCCGAAGGTGAGGAGCTTGAAACCCGTGGCGCTTTCTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269299.8
ENST00000619926.4
CDS-3UTR TCA 90 bp ACGGGTTTCAAGCTCCTCACCTTCGGAACATCACCCTATCCTTCCCCTTCCCTTCAGGGTCTCAGGGTCTaGTTCCCAGGTTCTTCAGTG +
Preference number: 4 (lower is better)
Translates to: TGFKLLTFGTSPYPSPSLQGLRV*FPGSSV
Trigger: CACTGAAGAACCTGGGAATCAGACCCTGAGACCCTG...AAGGGAAGGGGAAGGATAGGGTGATGTTCCGAAGGTGAGGAGCTTGAAACCCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269299.8
ENST00000619926.4
CDS-3UTR TCA 90 bp GATAACCTGCAAACTGCAGAAAGCGCCACGGGTTTCAAGCTCCTCACCTTCGGAGAGGTGGCCCTTTTCTaGGCTGATGGTGGTCACTCT +
Preference number: 4 (lower is better)
Translates to: DNLQTAESATGFKLLTFGEVALF*ADGGHS
Trigger: AGAGTGACCACCATCAGCTCAGAAAAGGGCCACCTC...TCCGAAGGTGAGGAGCTTGAAACCCGTGGCGCTTTCTGCAGTTTGCAGGTTATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269299.8
CDS-3UTR GCA 90 bp ACGGGTTTCAAGCTCCTCACCTTCGGAACATCACCCTATCCTTCCCCTTCCCTTTCAGTGCTGTGCAGATaGCGAACTAAGGAGGGGGCT +
Preference number: 4 (lower is better)
Translates to: TGFKLLTFGTSPYPSPSLSVLCR*RTKEGA
Trigger: AGCCCCCTCCTTAGTTCGGCATCTGCACAGCACTGA...AAGGGAAGGGGAAGGATAGGGTGATGTTCCGAAGGTGAGGAGCTTGAAACCCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269299.8
ENST00000619926.4
CDS-3UTR GCA 90 bp CTGCAGAAAGCGCCACGGGTTTCAAGCTCCTCACCTTCGGAACATCACCCTATCTCCCAGGTTCTTCAGTaGTGTGCAGATGCCGAACTA +
Preference number: 4 (lower is better)
Translates to: LQKAPRVSSSSPSEHHPISQVLQ*CADAEL
Trigger: TAGTTCGGCATCTGCACAGCACTGAAGAACCTGGGA...GATAGGGTGATGTTCCGAAGGTGAGGAGCTTGAAACCCGTGGCGCTTTCTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269299.8
ENST00000619926.4
CDS-3UTR TCA 90 bp AATTCCCGAGAAAGCAGAAGAGGCCCCCAGATGGGCGGATTCCCAATCCCGGACGGCAGGTCGAGGCATTaGAGAAATAAATTAAAGGAG +
Preference number: 4 (lower is better)
Translates to: NSRESRRGPQMGGFPIPDGRSRH*RNKLKE
Trigger: CTCCTTTAATTTATTTCTTCAATGCCTCGACCTGCC...GTCCGGGATTGGGAATCCGCCCATCTGGGGGCCTCTTCTGCTTTCTCGGGAATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269299.8
ENST00000380920.8
ENST00000574330.5
ENST00000619926.4
CDS-3UTR CCA 90 bp GGTTTCAAGCTCCTCACCTTCGGAACATCACCCTATCCTTCCCCTTCCCTTAAAAGCTCCTCCTGCAGCTaGGAGTTTTGGGATCCGATC +
Preference number: 4 (lower is better)
Translates to: GFKLLTFGTSPYPSPSLKSSSCS*EFWDPI
Trigger: GATCGGATCCCAAAACTCCCAGCTGCAGGAGGAGCT...TTTAAGGGAAGGGGAAGGATAGGGTGATGTTCCGAAGGTGAGGAGCTTGAAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000269299.8
CDS-3UTR CCA 90 bp GATAACCTGCAAACTGCAGAAAGCGCCACGGGTTTCAAGCTCCTCACCTTCGGATGCTGTTTCTCCAGCTaGGACTCTAGCGACTTCATC +
Preference number: 4 (lower is better)
Translates to: DNLQTAESATGFKLLTFGCCFSS*DSSDFI
Trigger: GATGAAGTCGCTAGAGTCCCAGCTGGAGAAACAGCA...TCCGAAGGTGAGGAGCTTGAAACCCGTGGCGCTTTCTGCAGTTTGCAGGTTATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269299.8
ENST00000619926.4
CDS-3UTR GCA 90 bp ACAATGATAACCTGCAAACTGCAGAAAGCGCCACGGGTTTCAAGCTCCTCACCTTCTTTCTTCCCACATTaGCTCCCTGGGTGCTCAAGC +
Preference number: 4 (lower is better)
Translates to: TMITCKLQKAPRVSSSSPSFFPH*LPGCSS
Trigger: GCTTGAGCACCCAGGGAGGCAATGTGGGAAGAAAGA...AGGTGAGGAGCTTGAAACCCGTGGCGCTTTCTGCAGTTTGCAGGTTATCATTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269299.8
ENST00000619926.4
CDS-3UTR GCA 90 bp CGCCACGGGTTTCAAGCTCCTCACCTTCGGAACATCACCCTATCCTTCCCCTTCTTCACAATGATAACCTaGAAACTGCAGAAAGCGCCA +
Preference number: 4 (lower is better)
Translates to: RHGFQAPHLRNITLSFPFFTMIT*KLQKAP
Trigger: TGGCGCTTTCTGCAGTTTGCAGGTTATCATTGTGAA...GAAGGGGAAGGATAGGGTGATGTTCCGAAGGTGAGGAGCTTGAAACCCGTGGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269299.8
ENST00000619926.4
CDS-3UTR GCA 90 bp ACAATGATAACCTGCAAACTGCAGAAAGCGCCACGGGTTTCAAGCTCCTCACCTGGTTCTTCAGTGCTGTaGAGATGCCGAACTAAGGAG +
Preference number: 4 (lower is better)
Translates to: TMITCKLQKAPRVSSSSPGSSVL*RCRTKE
Trigger: CTCCTTAGTTCGGCATCTGCACAGCACTGAAGAACC...AGGTGAGGAGCTTGAAACCCGTGGCGCTTTCTGCAGTTTGCAGGTTATCATTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269299.8
ENST00000619926.4
CDS-3UTR GCA 90 bp CTGCAGAAAGCGCCACGGGTTTCAAGCTCCTCACCTTCGGAACATCACCCTATCTTCACAATGATAACCTaGAAACTGCAGAAAGCGCCA +
Preference number: 4 (lower is better)
Translates to: LQKAPRVSSSSPSEHHPIFTMIT*KLQKAP
Trigger: TGGCGCTTTCTGCAGTTTGCAGGTTATCATTGTGAA...GATAGGGTGATGTTCCGAAGGTGAGGAGCTTGAAACCCGTGGCGCTTTCTGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269299.8
ENST00000619926.4
CDS-3UTR CCA 90 bp GGTTTCAAGCTCCTCACCTTCGGAACATCACCCTATCCTTCCCCTTCCCTTAAATGCAGCTGGGAGTTTTaGGATCCGATCACACAGACA +
Preference number: 4 (lower is better)
Translates to: GFKLLTFGTSPYPSPSLKCSWEF*DPITQT
Trigger: TGTCTGTGTGATCGGATCCCAAAACTCCCAGCTGCA...TTTAAGGGAAGGGGAAGGATAGGGTGATGTTCCGAAGGTGAGGAGCTTGAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269299.8
CDS-3UTR CAA 90 bp AGGCCCCCAGATGGGCGGATTCCCAATCCCGGACCCCTGCGGCAGGTCGAGGCAGGCTCCTGGCTGGCCTaGTCCAGCTCTGTCTCGCAG +
Preference number: 5 (lower is better)
Translates to: RPPDGRIPNPGPLRQVEAGSWLA*SSSVSQ
Trigger: CTGCGAGACAGAGCTGGACAAGGCCAGCCAGGAGCC...TGCCTCGACCTGCCGCAGGGGTCCGGGATTGGGAATCCGCCCATCTGGGGGCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269299.8
ENST00000380920.8
ENST00000574330.5
ENST00000619926.4
CDS-3UTR CAA 90 bp CCCCCAGATGGGCGGATTCCCAATCCCGGACCCCTGCGGCAGGTCGAGGCATTGTGGGTGCTCAAGCCCTaGACCTGGGCCTCCGTGCTC +
Preference number: 5 (lower is better)
Translates to: PPDGRIPNPGPLRQVEALWVLKP*TWASVL
Trigger: GAGCACGGAGGCCCAGGTCAAGGGCTTGAGCACCCA...CAATGCCTCGACCTGCCGCAGGGGTCCGGGATTGGGAATCCGCCCATCTGGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269299.8
ENST00000380920.8
ENST00000574330.5
ENST00000619926.4
CDS-3UTR CAA 90 bp GAAGAGGCCCCCAGATGGGCGGATTCCCAATCCCGGACCCCTGCGGCAGGTCGATGGGTGCTCAAGCCCTaGACCTGGGCCTCCGTGCTC +
Preference number: 5 (lower is better)
Translates to: EEAPRWADSQSRTPAAGRWVLKP*TWASVL
Trigger: GAGCACGGAGGCCCAGGTCAAGGGCTTGAGCACCCA...TCGACCTGCCGCAGGGGTCCGGGATTGGGAATCCGCCCATCTGGGGGCCTCTTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269299.8
ENST00000380920.8
ENST00000574330.5
ENST00000619926.4
CDS-3UTR CAA 90 bp TCCTCCGAGCCCGTGGCCGTACCAGTCGTCCGGCTGCTCCGGCCTCCAGTTCCTGTCCTTTCTGAGCCATaGCCCTGGAGCGCCGCCATC +
Preference number: 5 (lower is better)
Translates to: SSEPVAVPVVRLLRPPVPVLSEP*PWSAAI
Trigger: GATGGCGGCGCTCCAGGGCAATGGCTCAGAAAGGAC...AGGAACTGGAGGCCGGAGCAGCCGGACGACTGGTACGGCCACGGGCTCGGAGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574330.5
CDS-3UTR CAA 90 bp AGGCCCCCAGATGGGCGGATTCCCAATCCCGGACCCCTGCGGCAGGTCGAGGCACTTCCAGGGCCCGTTTaGGTCGTGGAGGCCCATCCA +
Preference number: 5 (lower is better)
Translates to: RPPDGRIPNPGPLRQVEALPGPV*VVEAHP
Trigger: TGGATGGGCCTCCACGACCAAAACGGGCCCTGGAAG...TGCCTCGACCTGCCGCAGGGGTCCGGGATTGGGAATCCGCCCATCTGGGGGCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269299.8
ENST00000380920.8
ENST00000574330.5
ENST00000619926.4
CDS-3UTR CAA 90 bp GAGGCCCCCAGATGGGCGGATTCCCAATCCCGGACCCCTGCGGCAGGTCGAGGCGGGAGGAGAATCGTGTaGCCCCCACACATGCCAGTC +
Preference number: 5 (lower is better)
Translates to: EAPRWADSQSRTPAAGRGGRRIV*PPHMPV
Trigger: GACTGGCATGTGTGGGGGCAACACGATTCTCCTCCC...GCCTCGACCTGCCGCAGGGGTCCGGGATTGGGAATCCGCCCATCTGGGGGCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000619926.4
CDS-3UTR CAA 90 bp CCCCCAGATGGGCGGATTCCCAATCCCGGACCCCTGCGGCAGGTCGAGGCATTGGCGCTGGACCTGGGATaGCTCAGGGTCTCAGGGTCT +
Preference number: 5 (lower is better)
Translates to: PPDGRIPNPGPLRQVEALALDLG*LRVSGS
Trigger: AGACCCTGAGACCCTGAGCAATCCCAGGTCCAGCGC...CAATGCCTCGACCTGCCGCAGGGGTCCGGGATTGGGAATCCGCCCATCTGGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269299.8
ENST00000619926.4
CDS TCA 90 bp CAGGAACCTCAGTCCACCCCCTCCTCCCGCGCCTTGAAACGCAATTaGGTGGCCCGCGCCTCGGAGTCGCTGCTTCCCCTGAAAGTGGGG +
Preference number: 5 (lower is better)
Translates to: QEPQSTPSSRALKRN*VARASESLLPLKVG
Trigger: CCCCACTTTCAGGGGAAGCAGCGACTCCGAGGCGCGGGCCACTCAATTGCGTTTCAAGGCGCGGGAGGAGGGGGTGGACTGAGGTTCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573596.1
CDS TCA 90 bp TGCAGCCAATCCAGGAACCTCAGTCCACCCCCTCCTCCCGCGCCTTaGAACGCAATTGAGTGGCCCGCGCCTCGGAGTCGCTGCTTCCCC +
Preference number: 5 (lower is better)
Translates to: CSQSRNLSPPPPPAP*NAIEWPAPRSRCFP
Trigger: GGGGAAGCAGCGACTCCGAGGCGCGGGCCACTCAATTGCGTTTCAAGGCGCGGGAGGAGGGGGTGGACTGAGGTTCCTGGATTGGCTGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000573596.1
CDS CCA 90 bp CCCAGAGAGAGAGCCAGGCTCACGGGCAAGAGTAGGAGCTGTGGCTaGGGGGTGGAGAACCGCCAAATTCTCGCCTTGCAGAGGCAGGGC +
Preference number: 5 (lower is better)
Translates to: PRERARLTGKSRSCG*GVENRQILALQRQG
Trigger: GCCCTGCCTCTGCAAGGCGAGAATTTGGCGGTTCTCCACCCCCCAGCCACAGCTCCTACTCTTGCCCGTGAGCCTGGCTCTCTCTCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000573596.1
CDS-3UTR CAA 90 bp CCAGATGGGCGGATTCCCAATCCCGGACCCCTGCGGCAGGTCGAGGCATTGAAGGCGCTGGACCTGGGATaGCTCAGGGTCTCAGGGTCT +
Preference number: 5 (lower is better)
Translates to: PDGRIPNPGPLRQVEALKALDLG*LRVSGS
Trigger: AGACCCTGAGACCCTGAGCAATCCCAGGTCCAGCGC...CTTCAATGCCTCGACCTGCCGCAGGGGTCCGGGATTGGGAATCCGCCCATCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269299.8
ENST00000619926.4
CDS-3UTR CAA 90 bp AGAGGCCCCCAGATGGGCGGATTCCCAATCCCGGACCCCTGCGGCAGGTCGAGGGTGCTCGCTGTGAAGTaGCTGAACGTCTCTCTCAGG +
Preference number: 5 (lower is better)
Translates to: RGPQMGGFPIPDPCGRSRVLAVK*LNVSLR
Trigger: CCTGAGAGAGACGTTCAGCAACTTCACAGCGAGCAC...CCTCGACCTGCCGCAGGGGTCCGGGATTGGGAATCCGCCCATCTGGGGGCCTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269299.8
ENST00000380920.8
ENST00000619926.4
CDS-3UTR CAA 90 bp CCCGAGAAAGCAGAAGAGGCCCCCAGATGGGCGGATTCCCAATCCCGGACCCCTGTCCTTTCTGAGCCATaGCCCTGGAGCGCCGCCATC +
Preference number: 5 (lower is better)
Translates to: PEKAEEAPRWADSQSRTPVLSEP*PWSAAI
Trigger: GATGGCGGCGCTCCAGGGCAATGGCTCAGAAAGGAC...AGGGGTCCGGGATTGGGAATCCGCCCATCTGGGGGCCTCTTCTGCTTTCTCGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269299.8
ENST00000380920.8
ENST00000574330.5
ENST00000619926.4
CDS-3UTR CAA 90 bp CCCAGATGGGCGGATTCCCAATCCCGGACCCCTGCGGCAGGTCGAGGCATTGAAGTCCTTTCTGAGCCATaGCCCTGGAGCGCCGCCATC +
Preference number: 5 (lower is better)
Translates to: PRWADSQSRTPAAGRGIEVLSEP*PWSAAI
Trigger: GATGGCGGCGCTCCAGGGCAATGGCTCAGAAAGGAC...TTCAATGCCTCGACCTGCCGCAGGGGTCCGGGATTGGGAATCCGCCCATCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269299.8
ENST00000380920.8
ENST00000574330.5
ENST00000619926.4
CDS-3UTR CAA 90 bp AAAGCAGAAGAGGCCCCCAGATGGGCGGATTCCCAATCCCGGACCCCTGCGGCACTTCCAGGGCCCGTTTaGGTCGTGGAGGCCCATCCA +
Preference number: 5 (lower is better)
Translates to: KAEEAPRWADSQSRTPAALPGPV*VVEAHP
Trigger: TGGATGGGCCTCCACGACCAAAACGGGCCCTGGAAG...TGCCGCAGGGGTCCGGGATTGGGAATCCGCCCATCTGGGGGCCTCTTCTGCTTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269299.8
ENST00000380920.8
ENST00000574330.5
ENST00000619926.4
CDS-3UTR CAA 90 bp CCCAGATGGGCGGATTCCCAATCCCGGACCCCTGCGGCAGGTCGAGGCATTGAACTTCCAGGGCCCGTTTaGGTCGTGGAGGCCCATCCA +
Preference number: 5 (lower is better)
Translates to: PRWADSQSRTPAAGRGIELPGPV*VVEAHP
Trigger: TGGATGGGCCTCCACGACCAAAACGGGCCCTGGAAG...TTCAATGCCTCGACCTGCCGCAGGGGTCCGGGATTGGGAATCCGCCCATCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269299.8
ENST00000380920.8
ENST00000574330.5
ENST00000619926.4
CDS TCA 90 bp GGGCAGCAGGTCCTTTCTGAGCCATTGCCCTGGAGCGCCGCCATCTaGCAGCTCAGGCTCCGCAGGTCAGACACGAACTGCTTCACGTGG +
Preference number: 5 (lower is better)
Translates to: GQQVLSEPLPWSAAI*QLRLRRSDTNCFTW
Trigger: CCACGTGAAGCAGTTCGTGTCTGACCTGCGGAGCCTGAGCTGTCAGATGGCGGCGCTCCAGGGCAATGGCTCAGAAAGGACCTGCTGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000269299.8
ENST00000380920.8
ENST00000572879.5
ENST00000574330.5
ENST00000574388.5
ENST00000619926.4
CDS-3UTR CAA 90 bp GCAGAAGAGGCCCCCAGATGGGCGGATTCCCAATCCCGGACCCCTGCGGCAGGTGTGCTCGCTGTGAAGTaGCTGAACGTCTCTCTCAGG +
Preference number: 5 (lower is better)
Translates to: AEEAPRWADSQSRTPAAGVLAVK*LNVSLR
Trigger: CCTGAGAGAGACGTTCAGCAACTTCACAGCGAGCAC...ACCTGCCGCAGGGGTCCGGGATTGGGAATCCGCCCATCTGGGGGCCTCTTCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269299.8
ENST00000380920.8
ENST00000619926.4
CDS-3UTR CAA 90 bp AGATGGGCGGATTCCCAATCCCGGACCCCTGCGGCAGGTCGAGGCATTGAAGAAGGCTCCTGGCTGGCCTaGTCCAGCTCTGTCTCGCAG +
Preference number: 5 (lower is better)
Translates to: RWADSQSRTPAAGRGIEEGSWLA*SSSVSQ
Trigger: CTGCGAGACAGAGCTGGACAAGGCCAGCCAGGAGCC...TTCTTCAATGCCTCGACCTGCCGCAGGGGTCCGGGATTGGGAATCCGCCCATCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269299.8
ENST00000380920.8
ENST00000574330.5
ENST00000619926.4
CDS-3UTR CAA 90 bp ATTCCCGAGAAAGCAGAAGAGGCCCCCAGATGGGCGGATTCCCAATCCCGGACCGGAGTGGGGGATGGGTaGCCTCTGCTCTGCTCCCCA +
Preference number: 5 (lower is better)
Translates to: IPEKAEEAPRWADSQSRTGVGDG*PLLCSP
Trigger: TGGGGAGCAGAGCAGAGGCAACCCATCCCCCACTCC...GGTCCGGGATTGGGAATCCGCCCATCTGGGGGCCTCTTCTGCTTTCTCGGGAAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000619926.4
CDS GCA 90 bp TGCCGGGTCTCCTCCGCTGCGGACCCTCCTTCCGTCAAAGCGCGCTaGACCCCATCCCCCACGAACTTCATCCTTGCTCAGCCTAAACAA +
Preference number: 5 (lower is better)
Translates to: CRVSSAADPPSVKAR*TPSPTNFILAQPKQ
Trigger: TTGTTTAGGCTGAGCAAGGATGAAGTTCGTGGGGGATGGGGTGCAGCGCGCTTTGACGGAAGGAGGGTCCGCAGCGGAGGAGACCCGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573596.1
CDS CCA 90 bp GAACGTCTCTCTCAGGCCCCGCAGCTCCTCCTGCAGCTGGGAGTCTaGCCAGGACAGCGTGCAGAGAGAAGAAAACGGGATCGCTGTGTC +
Preference number: 5 (lower is better)
Translates to: ERLSQAPQLLLQLGV*PGQRAERRKRDRCV
Trigger: GACACAGCGATCCCGTTTTCTTCTCTCTGCACGCTGTCCTGGCCAGACTCCCAGCTGCAGGAGGAGCTGCGGGGCCTGAGAGAGACGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573596.1
CDS-3UTR CAA 90 bp ATTCCCGAGAAAGCAGAAGAGGCCCCCAGATGGGCGGATTCCCAATCCCGGACCGTCCTTTCTGAGCCATaGCCCTGGAGCGCCGCCATC +
Preference number: 5 (lower is better)
Translates to: IPEKAEEAPRWADSQSRTVLSEP*PWSAAI
Trigger: GATGGCGGCGCTCCAGGGCAATGGCTCAGAAAGGAC...GGTCCGGGATTGGGAATCCGCCCATCTGGGGGCCTCTTCTGCTTTCTCGGGAAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269299.8
ENST00000380920.8
ENST00000574330.5
ENST00000619926.4
CDS-3UTR CAA 90 bp TGGGCGGATTCCCAATCCCGGACCCCTGCGGCAGGTCGAGGCATTGAAGAAATAGGCTCCTGGCTGGCCTaGTCCAGCTCTGTCTCGCAG +
Preference number: 5 (lower is better)
Translates to: WADSQSRTPAAGRGIEEIGSWLA*SSSVSQ
Trigger: CTGCGAGACAGAGCTGGACAAGGCCAGCCAGGAGCC...TATTTCTTCAATGCCTCGACCTGCCGCAGGGGTCCGGGATTGGGAATCCGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269299.8
ENST00000380920.8
ENST00000574330.5
ENST00000619926.4
CDS GCA 90 bp GGGATGGGTTGCCTCTGCTCTGCTCCCCAGGGAGGAGAATCGTGTTaGCCCCACACATGCCAGTCACCTCACTCTTCCGTGCACCGTTTG +
Preference number: 5 (lower is better)
Translates to: GMGCLCSAPQGGESC*PHTCQSPHSSVHRL
Trigger: CAAACGGTGCACGGAAGAGTGAGGTGACTGGCATGTGTGGGGGCAACACGATTCTCCTCCCTGGGGAGCAGAGCAGAGGCAACCCATCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619926.4
CDS-3UTR CAA 90 bp TGGGCGGATTCCCAATCCCGGACCCCTGCGGCAGGTCGAGGCATTGAAGAAATACTTCCAGGGCCCGTTTaGGTCGTGGAGGCCCATCCA +
Preference number: 5 (lower is better)
Translates to: WADSQSRTPAAGRGIEEILPGPV*VVEAHP
Trigger: TGGATGGGCCTCCACGACCAAAACGGGCCCTGGAAG...TATTTCTTCAATGCCTCGACCTGCCGCAGGGGTCCGGGATTGGGAATCCGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269299.8
ENST00000380920.8
ENST00000574330.5
ENST00000619926.4
CDS-3UTR CAA 90 bp CACGGGTTTCAAGCTCCTCACCTTCGGAACATCACCCTATCCTTCCCCTTCCCTTGGGTGCTCAAGCCCTaGACCTGGGCCTCCGTGCTC +
Preference number: 5 (lower is better)
Translates to: HGFQAPHLRNITLSFPFPWVLKP*TWASVL
Trigger: GAGCACGGAGGCCCAGGTCAAGGGCTTGAGCACCCA...AGGGAAGGGGAAGGATAGGGTGATGTTCCGAAGGTGAGGAGCTTGAAACCCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269299.8
ENST00000619926.4
CDS-3UTR CAA 90 bp TCCCGAGAAAGCAGAAGAGGCCCCCAGATGGGCGGATTCCCAATCCCGGACCCCAGAGGTGGAAATGGATaGGAACTTAGGGGAGTGTGG +
Preference number: 5 (lower is better)
Translates to: SRESRRGPQMGGFPIPDPRGGNG*ELRGVW
Trigger: CCACACTCCCCTAAGTTCCAATCCATTTCCACCTCT...GGGGTCCGGGATTGGGAATCCGCCCATCTGGGGGCCTCTTCTGCTTTCTCGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000619926.4
CDS TCA 90 bp GATAGGGCTGGCGCTGGACCTGGGATTGCTCAGGGTCTCAGGGTCTaGTTCCCAGGTTCTTCAGTGCTGTGCAGATGCCGAACTAAGGAG +
Preference number: 5 (lower is better)
Translates to: DRAGAGPGIAQGLRV*FPGSSVLCRCRTKE
Trigger: CTCCTTAGTTCGGCATCTGCACAGCACTGAAGAACCTGGGAATCAGACCCTGAGACCCTGAGCAATCCCAGGTCCAGCGCCAGCCCTATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269299.8
ENST00000573596.1
ENST00000619926.4
CDS TCA 90 bp AACAGGTGCACGCCACCACGCCTGGTTGCTCAGGGTCTCAGGGTCTaGTTCCCAGGTTCTTCAGTGCTGTGCAGATGCCGAACTAAGGAG +
Preference number: 5 (lower is better)
Translates to: NRCTPPRLVAQGLRV*FPGSSVLCRCRTKE
Trigger: CTCCTTAGTTCGGCATCTGCACAGCACTGAAGAACCTGGGAATCAGACCCTGAGACCCTGAGCAACCAGGCGTGGTGGCGTGCACCTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573083.1
CDS-3UTR CAA 90 bp CGCCACGGGTTTCAAGCTCCTCACCTTCGGAACATCACCCTATCCTTCCCCTTCCCAGTGCCCGGGACTTaGGACAGTAAACAGAGGTGG +
Preference number: 5 (lower is better)
Translates to: RHGFQAPHLRNITLSFPFPVPGT*DSKQRW
Trigger: CCACCTCTGTTTACTGTCCAAAGTCCCGGGCACTGG...GAAGGGGAAGGATAGGGTGATGTTCCGAAGGTGAGGAGCTTGAAACCCGTGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619926.4
CDS CCA 90 bp CCTAGTAGTCTAGGAGGAACCATGTACATGAAGAAATGCGGGCGGTaGGCGACCCTGCAGGGCCAGAGGCAACTGGAAATCGGGGAGAAA +
Preference number: 5 (lower is better)
Translates to: PSSLGGTMYMKKCGR*ATLQGQRQLEIGEK
Trigger: TTTCTCCCCGATTTCCAGTTGCCTCTGGCCCTGCAGGGTCGCCCACCGCCCGCATTTCTTCATGTACATGGTTCCTCCTAGACTACTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570576.1
ENST00000573596.1
CDS GCA 90 bp CTGGGATTGCTCAGGGTCTCAGGGTCTGATTCCCAGGTTCTTCAGTaGTGTGCAGATGCCGAACTAAGGAGGGGGCTGAAGCTTGGAGAA +
Preference number: 5 (lower is better)
Translates to: LGLLRVSGSDSQVLQ*CADAELRRGLKLGE
Trigger: TTCTCCAAGCTTCAGCCCCCTCCTTAGTTCGGCATCTGCACAGCACTGAAGAACCTGGGAATCAGACCCTGAGACCCTGAGCAATCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269299.8
ENST00000573596.1
ENST00000619926.4
CDS-3UTR CAA 90 bp AAAGCGCCACGGGTTTCAAGCTCCTCACCTTCGGAACATCACCCTATCCTTCCCGTGCTCGCTGTGAAGTaGCTGAACGTCTCTCTCAGG +
Preference number: 5 (lower is better)
Translates to: KAPRVSSSSPSEHHPILPVLAVK*LNVSLR
Trigger: CCTGAGAGAGACGTTCAGCAACTTCACAGCGAGCAC...GGGAAGGATAGGGTGATGTTCCGAAGGTGAGGAGCTTGAAACCCGTGGCGCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269299.8
ENST00000619926.4
CDS TCA 90 bp CCCGCCACCTCTCTTCCCATTTTACTTGCTCAGGGTCTCAGGGTCTaGTTCCCAGGTTCTTCAGTGCTGTGCAGATGCCGAACTAAGGAG +
Preference number: 5 (lower is better)
Translates to: PATSLPILLAQGLRV*FPGSSVLCRCRTKE
Trigger: CTCCTTAGTTCGGCATCTGCACAGCACTGAAGAACCTGGGAATCAGACCCTGAGACCCTGAGCAAGTAAAATGGGAAGAGAGGTGGCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574388.5
CDS TCA 90 bp AATTCTCGCCTTGCAGAGGCAGGGCAAGGTGGCCCTCACCTTTTCTaGGCTGATGGTGGTCACTCTCCTCATTGTCCAGATGCTGAAGGT +
Preference number: 5 (lower is better)
Translates to: NSRLAEAGQGGPHLF*ADGGHSPHCPDAEG
Trigger: ACCTTCAGCATCTGGACAATGAGGAGAGTGACCACCATCAGCTCAGAAAAGGTGAGGGCCACCTTGCCCTGCCTCTGCAAGGCGAGAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573596.1
CDS GCA 90 bp GTCCATGAATTCCACTTGTCTTTGGCTGCGTGCAGGGAGAGAAGGTaGAATAGCTACCATTCAGGCCCTCAAGTCTTCCACCCAGCAGGG +
Preference number: 5 (lower is better)
Translates to: VHEFHLSLAACRERR*NSYHSGPQVFHPAG
Trigger: CCCTGCTGGGTGGAAGACTTGAGGGCCTGAATGGTAGCTATTGCACCTTCTCTCCCTGCACGCAGCCAAAGACAAGTGGAATTCATGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573596.1
CDS-3UTR CAA 90 bp GATAACCTGCAAACTGCAGAAAGCGCCACGGGTTTCAAGCTCCTCACCTTCGGACTGCAGCTGGGAGTTTaGGGATCCGATCACACAGAC +
Preference number: 5 (lower is better)
Translates to: DNLQTAESATGFKLLTFGLQLGV*GSDHTD
Trigger: GTCTGTGTGATCGGATCCCAAAACTCCCAGCTGCAG...TCCGAAGGTGAGGAGCTTGAAACCCGTGGCGCTTTCTGCAGTTTGCAGGTTATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000269299.8
CDS-3UTR CAA 90 bp CTCACCTTCGGAACATCACCCTATCCTTCCCCTTCCCTTAAAATCCTAGATGAAGGCTCCTGGCTGGCCTaGTCCAGCTCTGTCTCGCAG +
Preference number: 5 (lower is better)
Translates to: LTFGTSPYPSPSLKILDEGSWLA*SSSVSQ
Trigger: CTGCGAGACAGAGCTGGACAAGGCCAGCCAGGAGCC...TTCATCTAGGATTTTAAGGGAAGGGGAAGGATAGGGTGATGTTCCGAAGGTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269299.8
ENST00000619926.4
CDS GCA 90 bp TTTTACTTGCTCAGGGTCTCAGGGTCTGATTCCCAGGTTCTTCAGTaGTGTGCAGATGCCGAACTAAGGAGGGGGCTGAAGCTTGGAGAA +
Preference number: 5 (lower is better)
Translates to: FYLLRVSGSDSQVLQ*CADAELRRGLKLGE
Trigger: TTCTCCAAGCTTCAGCCCCCTCCTTAGTTCGGCATCTGCACAGCACTGAAGAACCTGGGAATCAGACCCTGAGACCCTGAGCAAGTAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574388.5
CDS-3UTR CAA 90 bp GCGCCACGGGTTTCAAGCTCCTCACCTTCGGAACATCACCCTATCCTTCCCCTTCAGATGCTGAAGGTCTaGATACTCCTTGGTCATGAT +
Preference number: 5 (lower is better)
Translates to: APRVSSSSPSEHHPILPLQMLKV*ILLGHD
Trigger: ATCATGACCAAGGAGTATCAAGACCTTCAGCATCTG...AAGGGGAAGGATAGGGTGATGTTCCGAAGGTGAGGAGCTTGAAACCCGTGGCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269299.8
ENST00000619926.4
CDS GCA 90 bp AAGGTTTCTTTCTCTGTCCATGAATTCCACTTGTCTTTGGCTGCGTaGAGGGAGAGAAGGTGCAATAGCTACCATTCAGGCCCTCAAGTC +
Preference number: 5 (lower is better)
Translates to: KVSFSVHEFHLSLAA*RERRCNSYHSGPQV
Trigger: GACTTGAGGGCCTGAATGGTAGCTATTGCACCTTCTCTCCCTGCACGCAGCCAAAGACAAGTGGAATTCATGGACAGAGAAAGAAACCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573596.1
CDS-3UTR CAA 90 bp ATGATAACCTGCAAACTGCAGAAAGCGCCACGGGTTTCAAGCTCCTCACCTTCGCAGATGCTGAAGGTCTaGATACTCCTTGGTCATGAT +
Preference number: 5 (lower is better)
Translates to: MITCKLQKAPRVSSSSPSQMLKV*ILLGHD
Trigger: ATCATGACCAAGGAGTATCAAGACCTTCAGCATCTG...CGAAGGTGAGGAGCTTGAAACCCGTGGCGCTTTCTGCAGTTTGCAGGTTATCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269299.8
ENST00000619926.4
CDS CCA 90 bp AAAGAAGGAAGGTTTCTTTCTCTGTCCATGAATTCCACTTGTCTTTaGCTGCGTGCAGGGAGAGAAGGTGCAATAGCTACCATTCAGGCC +
Preference number: 5 (lower is better)
Translates to: KEGRFLSLSMNSTCL*LRAGREGAIATIQA
Trigger: GGCCTGAATGGTAGCTATTGCACCTTCTCTCCCTGCACGCAGCCAAAGACAAGTGGAATTCATGGACAGAGAAAGAAACCTTCCTTCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573596.1
CDS TCA 72 bp GGCCGGACCCAGGCCGAGGGAGGGCGCGCACTCACTTaGAGCCCGTCTCGTAGTCCGTCCCGTCCACCCACT +
Preference number: 6 (lower is better)
Translates to: GRTQAEGGRALT*SPSRSPSRPPT
Trigger: AGTGGGTGGACGGGACGGACTACGAGACGGGCTTCAAGTGAGTGCGCGCCCTCCCTCGGCCTGGGTCCGGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572879.5
ENST00000574330.5
CDS TCA 72 bp CAGTCCACCCCCTCCTCCCGCGCCTTGAAACGCAATTaGGTGGCCCGCGCCTCGGAGTCGCTGCTTCCCCTG +
Preference number: 6 (lower is better)
Translates to: QSTPSSRALKRN*VARASESLLPL
Trigger: CAGGGGAAGCAGCGACTCCGAGGCGCGGGCCACTCAATTGCGTTTCAAGGCGCGGGAGGAGGGGGTGGACTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573596.1
CDS TCA 72 bp TCCAGGAACCTCAGTCCACCCCCTCCTCCCGCGCCTTaGAACGCAATTGAGTGGCCCGCGCCTCGGAGTCGC +
Preference number: 6 (lower is better)
Translates to: SRNLSPPPPPAP*NAIEWPAPRSR
Trigger: GCGACTCCGAGGCGCGGGCCACTCAATTGCGTTTCAAGGCGCGGGAGGAGGGGGTGGACTGAGGTTCCTGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000573596.1
CDS CAA 72 bp TCAGTCCACCCCCTCCTCCCGCGCCTTGAAACGCAATaGAGTGGCCCGCGCCTCGGAGTCGCTGCTTCCCCT +
Preference number: 6 (lower is better)
Translates to: SVHPLLPRLETQ*SGPRLGVAASP
Trigger: AGGGGAAGCAGCGACTCCGAGGCGCGGGCCACTCAATTGCGTTTCAAGGCGCGGGAGGAGGGGGTGGACTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573596.1
CDS CAA 90 bp CCAGGAACCTCAGTCCACCCCCTCCTCCCGCGCCTTGAAACGCAATaGAGTGGCCCGCGCCTCGGAGTCGCTGCTTCCCCTGAAAGTGGG +
Preference number: 6 (lower is better)
Translates to: PGTSVHPLLPRLETQ*SGPRLGVAASPESG
Trigger: CCCACTTTCAGGGGAAGCAGCGACTCCGAGGCGCGGGCCACTCAATTGCGTTTCAAGGCGCGGGAGGAGGGGGTGGACTGAGGTTCCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573596.1
CDS CCA 72 bp GCTGAAGCTTGGAGAATGGGGGTGGGCGGACAGCCGTaGACAATGGGAGGGGAGCGGGCAGGGTCCATAGGA +
Preference number: 6 (lower is better)
Translates to: AEAWRMGVGGQP*TMGGERAGSIG
Trigger: TCCTATGGACCCTGCCCGCTCCCCTCCCATTGTCCACGGCTGTCCGCCCACCCCCATTCTCCAAGCTTCAGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269299.8
ENST00000573083.1
ENST00000573596.1
ENST00000574388.5
ENST00000619926.4
CDS CAA 90 bp TGGGTGCTCAAGCCCTTGACCTGGGCCTCCGTGCTCGCTGTGAAGTaGCTGAACGTCTCTCTCAGGCCCCGCAGCTCCTCCTGCAGCTGG +
Preference number: 6 (lower is better)
Translates to: WVLKPLTWASVLAVK*LNVSLRPRSSSCSW
Trigger: CCAGCTGCAGGAGGAGCTGCGGGGCCTGAGAGAGACGTTCAGCAACTTCACAGCGAGCACGGAGGCCCAGGTCAAGGGCTTGAGCACCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000269299.8
ENST00000380920.8
ENST00000570576.1
ENST00000572879.5
ENST00000573083.1
ENST00000573596.1
ENST00000574388.5
ENST00000619926.4
CDS GCA 72 bp TCCTCCGCTGCGGACCCTCCTTCCGTCAAAGCGCGCTaGACCCCATCCCCCACGAACTTCATCCTTGCTCAG +
Preference number: 6 (lower is better)
Translates to: SSAADPPSVKAR*TPSPTNFILAQ
Trigger: CTGAGCAAGGATGAAGTTCGTGGGGGATGGGGTGCAGCGCGCTTTGACGGAAGGAGGGTCCGCAGCGGAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573596.1
CDS CCA 72 bp GATGCCGAACTAAGGAGGGGGCTGAAGCTTGGAGAATaGGGGTGGGCGGACAGCCGTGGACAATGGGAGGGG +
Preference number: 6 (lower is better)
Translates to: DAELRRGLKLGE*GWADSRGQWEG
Trigger: CCCCTCCCATTGTCCACGGCTGTCCGCCCACCCCCATTCTCCAAGCTTCAGCCCCCTCCTTAGTTCGGCATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269299.8
ENST00000573083.1
ENST00000573596.1
ENST00000574388.5
ENST00000619926.4
CDS CAA 72 bp AAGCCCTTGACCTGGGCCTCCGTGCTCGCTGTGAAGTaGCTGAACGTCTCTCTCAGGCCCCGCAGCTCCTCC +
Preference number: 6 (lower is better)
Translates to: KPLTWASVLAVK*LNVSLRPRSSS
Trigger: GGAGGAGCTGCGGGGCCTGAGAGAGACGTTCAGCAACTTCACAGCGAGCACGGAGGCCCAGGTCAAGGGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000269299.8
ENST00000380920.8
ENST00000570576.1
ENST00000572879.5
ENST00000573083.1
ENST00000573596.1
ENST00000574388.5
ENST00000619926.4
CDS GCA 72 bp GAGAGAAGAAAACGGGATCGCTGTGTCCGCCACCACTaGACCCACCACTCCCTTGCCACGGTCCCCCGTCAA +
Preference number: 6 (lower is better)
Translates to: ERRKRDRCVRHH*THHSLATVPRQ
Trigger: TTGACGGGGGACCGTGGCAAGGGAGTGGTGGGTGCAGTGGTGGCGGACACAGCGATCCCGTTTTCTTCTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573596.1
CDS CCA 72 bp CCCACATTGCCTCCCTGGGTGCTCAAGCCCTTGACCTaGGCCTCCGTGCTCGCTGTGAAGTTGCTGAACGTC +
Preference number: 6 (lower is better)
Translates to: PTLPPWVLKPLT*ASVLAVKLLNV
Trigger: GACGTTCAGCAACTTCACAGCGAGCACGGAGGCCCAGGTCAAGGGCTTGAGCACCCAGGGAGGCAATGTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000269299.8
ENST00000380920.8
ENST00000570576.1
ENST00000573083.1
ENST00000573596.1
ENST00000574330.5
ENST00000574388.5
ENST00000619926.4
CDS CCA 72 bp AGAGCCAGGCTCACGGGCAAGAGTAGGAGCTGTGGCTaGGGGGTGGAGAACCGCCAAATTCTCGCCTTGCAG +
Preference number: 6 (lower is better)
Translates to: RARLTGKSRSCG*GVENRQILALQ
Trigger: CTGCAAGGCGAGAATTTGGCGGTTCTCCACCCCCCAGCCACAGCTCCTACTCTTGCCCGTGAGCCTGGCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000573596.1
CDS GCA 72 bp TGCCTCTGCTCTGCTCCCCAGGGAGGAGAATCGTGTTaGCCCCACACATGCCAGTCACCTCACTCTTCCGTG +
Preference number: 6 (lower is better)
Translates to: CLCSAPQGGESC*PHTCQSPHSSV
Trigger: CACGGAAGAGTGAGGTGACTGGCATGTGTGGGGGCAACACGATTCTCCTCCCTGGGGAGCAGAGCAGAGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619926.4
CDS CCA 72 bp CTGTGCAGATGCCGAACTAAGGAGGGGGCTGAAGCTTaGAGAATGGGGGTGGGCGGACAGCCGTGGACAATG +
Preference number: 6 (lower is better)
Translates to: LCRCRTKEGAEA*RMGVGGQPWTM
Trigger: CATTGTCCACGGCTGTCCGCCCACCCCCATTCTCCAAGCTTCAGCCCCCTCCTTAGTTCGGCATCTGCACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000269299.8
ENST00000573083.1
ENST00000573596.1
ENST00000574388.5
ENST00000619926.4
CDS TCA 72 bp GGCGCTGGACCTGGGATTGCTCAGGGTCTCAGGGTCTaGTTCCCAGGTTCTTCAGTGCTGTGCAGATGCCGA +
Preference number: 6 (lower is better)
Translates to: GAGPGIAQGLRV*FPGSSVLCRCR
Trigger: TCGGCATCTGCACAGCACTGAAGAACCTGGGAATCAGACCCTGAGACCCTGAGCAATCCCAGGTCCAGCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269299.8
ENST00000573596.1
ENST00000619926.4
CDS TCA 72 bp ACGCCACCACGCCTGGTTGCTCAGGGTCTCAGGGTCTaGTTCCCAGGTTCTTCAGTGCTGTGCAGATGCCGA +
Preference number: 6 (lower is better)
Translates to: TPPRLVAQGLRV*FPGSSVLCRCR
Trigger: TCGGCATCTGCACAGCACTGAAGAACCTGGGAATCAGACCCTGAGACCCTGAGCAACCAGGCGTGGTGGCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573083.1
CDS CAA 72 bp TTGCCTCTGCTCTGCTCCCCAGGGAGGAGAATCGTGTaGCCCCCACACATGCCAGTCACCTCACTCTTCCGT +
Preference number: 6 (lower is better)
Translates to: LPLLCSPGRRIV*PPHMPVTSLFR
Trigger: ACGGAAGAGTGAGGTGACTGGCATGTGTGGGGGCAACACGATTCTCCTCCCTGGGGAGCAGAGCAGAGGCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000619926.4
CDS GCA 72 bp CCTAGTAGTCTAGGAGGAACCATGTACATGAAGAAATaGGGGCGGTGGGCGACCCTGCAGGGCCAGAGGCAA +
Preference number: 6 (lower is better)
Translates to: PSSLGGTMYMKK*GRWATLQGQRQ
Trigger: TTGCCTCTGGCCCTGCAGGGTCGCCCACCGCCCGCATTTCTTCATGTACATGGTTCCTCCTAGACTACTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570576.1
ENST00000573596.1
CDS GCA 72 bp CTCAGGGTCTCAGGGTCTGATTCCCAGGTTCTTCAGTaGTGTGCAGATGCCGAACTAAGGAGGGGGCTGAAG +
Preference number: 6 (lower is better)
Translates to: LRVSGSDSQVLQ*CADAELRRGLK
Trigger: CTTCAGCCCCCTCCTTAGTTCGGCATCTGCACAGCACTGAAGAACCTGGGAATCAGACCCTGAGACCCTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269299.8
ENST00000573083.1
ENST00000573596.1
ENST00000574388.5
ENST00000619926.4
CDS CAA 72 bp TCCTTGGTCATGATAGGGCTGGCGCTGGACCTGGGATaGCTCAGGGTCTCAGGGTCTGATTCCCAGGTTCTT +
Preference number: 6 (lower is better)
Translates to: SLVMIGLALDLG*LRVSGSDSQVL
Trigger: AAGAACCTGGGAATCAGACCCTGAGACCCTGAGCAATCCCAGGTCCAGCGCCAGCCCTATCATGACCAAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269299.8
ENST00000573596.1
ENST00000619926.4
CDS CAA 90 bp CTTCCGTCAAAGCGCGCTGCACCCCATCCCCCACGAACTTCATCCTaGCTCAGCCTAAACAATTCCCTGCTCGGAGGACAAAGAAATGGG +
Preference number: 6 (lower is better)
Translates to: LPSKRAAPHPPRTSS*LSLNNSLLGGQRNG
Trigger: CCCATTTCTTTGTCCTCCGAGCAGGGAATTGTTTAGGCTGAGCAAGGATGAAGTTCGTGGGGGATGGGGTGCAGCGCGCTTTGACGGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573596.1
CDS CAA 90 bp GAGCTGATGGTGGTCACTCTCCTCATTGTCCAGATGCTGAAGGTCTaGATACTCCTTGGTCATGATAGGGCTGGCGCTGGACCTGGGACT +
Preference number: 6 (lower is better)
Translates to: ELMVVTLLIVQMLKV*ILLGHDRAGAGPGT
Trigger: AGTCCCAGGTCCAGCGCCAGCCCTATCATGACCAAGGAGTATCAAGACCTTCAGCATCTGGACAATGAGGAGAGTGACCACCATCAGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573083.1
ENST00000574388.5
CDS CAA 90 bp GAGCTGATGGTGGTCACTCTCCTCATTGTCCAGATGCTGAAGGTCTaGATACTCCTTGGTCATGATAGGGCTGGCGCTGGACCTGGGATT +
Preference number: 6 (lower is better)
Translates to: ELMVVTLLIVQMLKV*ILLGHDRAGAGPGI
Trigger: AATCCCAGGTCCAGCGCCAGCCCTATCATGACCAAGGAGTATCAAGACCTTCAGCATCTGGACAATGAGGAGAGTGACCACCATCAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269299.8
ENST00000573596.1
ENST00000619926.4
CDS GCA 72 bp TTCCACTTGTCTTTGGCTGCGTGCAGGGAGAGAAGGTaGAATAGCTACCATTCAGGCCCTCAAGTCTTCCAC +
Preference number: 6 (lower is better)
Translates to: FHLSLAACRERR*NSYHSGPQVFH
Trigger: GTGGAAGACTTGAGGGCCTGAATGGTAGCTATTGCACCTTCTCTCCCTGCACGCAGCCAAAGACAAGTGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573596.1
CDS TCA 72 bp TCTCTTCCCATTTTACTTGCTCAGGGTCTCAGGGTCTaGTTCCCAGGTTCTTCAGTGCTGTGCAGATGCCGA +
Preference number: 6 (lower is better)
Translates to: SLPILLAQGLRV*FPGSSVLCRCR
Trigger: TCGGCATCTGCACAGCACTGAAGAACCTGGGAATCAGACCCTGAGACCCTGAGCAAGTAAAATGGGAAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574388.5
CDS GCA 72 bp TTCTCTGTCCATGAATTCCACTTGTCTTTGGCTGCGTaGAGGGAGAGAAGGTGCAATAGCTACCATTCAGGC +
Preference number: 6 (lower is better)
Translates to: FSVHEFHLSLAA*RERRCNSYHSG
Trigger: GCCTGAATGGTAGCTATTGCACCTTCTCTCCCTGCACGCAGCCAAAGACAAGTGGAATTCATGGACAGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573596.1
CDS TCA 72 bp GGGAATGAGGGGCCCATCTCTTTACTCCCATCTGATTaGCGGCTCCATCATGGAGACCTTTCTTCTTTCTTT +
Preference number: 6 (lower is better)
Translates to: GNEGPISLLPSD*RLHHGDLSSFF
Trigger: AAAGAAAGAAGAAAGGTCTCCATGATGGAGCCGTCAATCAGATGGGAGTAAAGAGATGGGCCCCTCATTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573083.1
ENST00000574388.5
CDS CAA 90 bp GAAAGAAGGAAGGTTTCTTTCTCTGTCCATGAATTCCACTTGTCTTaGGCTGCGTGCAGGGAGAGAAGGTGCAATAGCTACCATTCAGGC +
Preference number: 6 (lower is better)
Translates to: ERRKVSFSVHEFHLS*AACRERRCNSYHSG
Trigger: GCCTGAATGGTAGCTATTGCACCTTCTCTCCCTGCACGCAGCCAAAGACAAGTGGAATTCATGGACAGAGAAAGAAACCTTCCTTCTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573596.1
CDS CAA 90 bp AGTGGGGAAAGAAGGAAGGTTTCTTTCTCTGTCCATGAATTCCACTaGTCTTTGGCTGCGTGCAGGGAGAGAAGGTGCAATAGCTACCAT +
Preference number: 6 (lower is better)
Translates to: SGERRKVSFSVHEFH*SLAACRERRCNSYH
Trigger: ATGGTAGCTATTGCACCTTCTCTCCCTGCACGCAGCCAAAGACAAGTGGAATTCATGGACAGAGAAAGAAACCTTCCTTCTTTCCCCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573596.1
CDS CAA 72 bp AGAAGGAAGGTTTCTTTCTCTGTCCATGAATTCCACTaGTCTTTGGCTGCGTGCAGGGAGAGAAGGTGCAAT +
Preference number: 6 (lower is better)
Translates to: RRKVSFSVHEFH*SLAACRERRCN
Trigger: ATTGCACCTTCTCTCCCTGCACGCAGCCAAAGACAAGTGGAATTCATGGACAGAGAAAGAAACCTTCCTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573596.1