Pregenerated sensors for ASF1A (Homo sapiens)
Ensembl gene IDs: ENSG00000111875Ensembl transcript IDs: ENST00000229595.6
Found 47 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AAGCTATCTAGAGTATGTCAACCACAAATATGCCTGATCTCATTCTaGATGAGTGTCAGAGGAAATGGGGAAGAGTACTACAGGTGTGAA | + |
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Preference number: 1 (lower is better) Translates to: KLSRVCQPQICLISF*MSVRGNGEEYYRCE Trigger: TTCACACCTGTAGTACTCTTCCCCATTTCCTCTGACACTCATGCAGAATGAGATCAGGCATATTTGTGGTTGACATACTCTAGATAGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000229595.6 |
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| 3UTR TCA 90 bp | TTGTTCTTCTCTTACCAAACAAACCAAATGCTGTCCAACATCTCATaGACTATAATAGTAGCCATAAGAGGCTTCACGGTGGCTTGGAAA | + |
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Preference number: 1 (lower is better) Translates to: LFFSYQTNQMLSNIS*TIIVAIRGFTVAWK Trigger: TTTCCAAGCCACCGTGAAGCCTCTTATGGCTACTATTATAGTTCATGAGATGTTGGACAGCATTTGGTTTGTTTGGTAAGAGAAGAACAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000229595.6 |
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| 3UTR-3UTR CCA 90 bp | TTAGATATGAAGGCACTGCATAACCTGCATCATATGGCTGTCTTGCTTAGCTGCGGTGGCTTGGAAAATTaGATCCTAAAGTTCTTGGTA | + |
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Preference number: 2 (lower is better) Translates to: LDMKALHNLHHMAVLLSCGGLEN*ILKFLV Trigger: TACCAAGAACTTTAGGATCCAATTTTCCAAGCCACC...GCAGCTAAGCAAGACAGCCATATGATGCAGGTTATGCAGTGCCTTCATATCTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000229595.6 |
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| 3UTR GCA 72 bp | AGAGTATGTCAACCACAAATATGCCTGATCTCATTCTaGATGAGTGTCAGAGGAAATGGGGAAGAGTACTAC | + |
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Preference number: 3 (lower is better) Translates to: RVCQPQICLISF*MSVRGNGEEYY Trigger: GTAGTACTCTTCCCCATTTCCTCTGACACTCATGCAGAATGAGATCAGGCATATTTGTGGTTGACATACTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000229595.6 |
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| 3UTR TCA 72 bp | TCTTACCAAACAAACCAAATGCTGTCCAACATCTCATaGACTATAATAGTAGCCATAAGAGGCTTCACGGTG | + |
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Preference number: 3 (lower is better) Translates to: SYQTNQMLSNIS*TIIVAIRGFTV Trigger: CACCGTGAAGCCTCTTATGGCTACTATTATAGTTCATGAGATGTTGGACAGCATTTGGTTTGTTTGGTAAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000229595.6 |
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| 3UTR CCA 72 bp | AAAGACTGTCTGGGAGGCCAAGACATCTTTACAACCTaGTCTAATGATTCCTGTTTCTTTATAAGTGCTTTC | + |
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Preference number: 3 (lower is better) Translates to: KDCLGGQDIFTT*SNDSCFFISAF Trigger: GAAAGCACTTATAAAGAAACAGGAATCATTAGACCAGGTTGTAAAGATGTCTTGGCCTCCCAGACAGTCTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000229595.6 |
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| 3UTR-3UTR CAA 90 bp | ATATTTGTTCTTCTCTTACCAAACAAACCAAATGCTGTCCAACATCTCATGAACCGGTGGCTTGGAAAATaGGATCCTAAAGTTCTTGGT | + |
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Preference number: 3 (lower is better) Translates to: IFVLLLPNKPNAVQHLMNRWLGK*DPKVLG Trigger: ACCAAGAACTTTAGGATCCAATTTTCCAAGCCACCG...GTTCATGAGATGTTGGACAGCATTTGGTTTGTTTGGTAAGAGAAGAACAAATAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000229595.6 |
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| CDS-3UTR GCA 90 bp | GGTCCAAAGACTGTCTGGGAGGCCAAGACATCTTTACAACCTGGTCTAATGATTGCCGGCCAGACGTCGTaGAGCGGCGACTTGAGAAAC | + |
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Preference number: 4 (lower is better) Translates to: GPKTVWEAKTSLQPGLMIAGQTS*SGDLRN Trigger: GTTTCTCAAGTCGCCGCTGCACGACGTCTGGCCGGC...AATCATTAGACCAGGTTGTAAAGATGTCTTGGCCTCCCAGACAGTCTTTGGACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000229595.6 |
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| CDS-3UTR GCA 90 bp | TCAAAGGCCAGTAAAATAGTGGTCCAAAGACTGTCTGGGAGGCCAAGACATCTTGGAACTGGGGCTGGTTaGGGCACAATAAAGTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: SKASKIVVQRLSGRPRHLGTGAG*GTIKSS Trigger: GCTGGACTTTATTGTGCCGCAACCAGCCCCAGTTCC...AAGATGTCTTGGCCTCCCAGACAGTCTTTGGACCACTATTTTACTGGCCTTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000229595.6 |
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| CDS-3UTR GCA 90 bp | GGTCCAAAGACTGTCTGGGAGGCCAAGACATCTTTACAACCTGGTCTAATGATTTACGCCTACTGCATCTaGATCTGGAATGAGTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: GPKTVWEAKTSLQPGLMIYAYCI*IWNESW Trigger: CCAGGACTCATTCCAGATGCAGATGCAGTAGGCGTA...AATCATTAGACCAGGTTGTAAAGATGTCTTGGCCTCCCAGACAGTCTTTGGACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000229595.6 |
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| CDS-3UTR CCA 90 bp | TTAGATATGAAGGCACTGCATAACCTGCATCATATGGCTGTCTTGCTTAGCTGCAATGGGAACTGGGGCTaGTTGCGGCACAATAAAGTC | + |
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Preference number: 4 (lower is better) Translates to: LDMKALHNLHHMAVLLSCNGNWG*LRHNKV Trigger: GACTTTATTGTGCCGCAACCAGCCCCAGTTCCCATT...GCAGCTAAGCAAGACAGCCATATGATGCAGGTTATGCAGTGCCTTCATATCTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000229595.6 |
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| CDS-3UTR GCA 90 bp | TCAAAGGCCAGTAAAATAGTGGTCCAAAGACTGTCTGGGAGGCCAAGACATCTTAACAGTTACGCCTACTaGATCTGCATCTGGAATGAG | + |
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Preference number: 4 (lower is better) Translates to: SKASKIVVQRLSGRPRHLNSYAY*ICIWNE Trigger: CTCATTCCAGATGCAGATGCAGTAGGCGTAACTGTT...AAGATGTCTTGGCCTCCCAGACAGTCTTTGGACCACTATTTTACTGGCCTTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000229595.6 |
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| CDS-3UTR GCA 90 bp | TTAGATATGAAGGCACTGCATAACCTGCATCATATGGCTGTCTTGCTTAGCTGCAGGCACTGCATAACCTaGATCATATGGCTGTCTTGC | + |
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Preference number: 4 (lower is better) Translates to: LDMKALHNLHHMAVLLSCRHCIT*IIWLSC Trigger: GCAAGACAGCCATATGATGCAGGTTATGCAGTGCCT...GCAGCTAAGCAAGACAGCCATATGATGCAGGTTATGCAGTGCCTTCATATCTAA 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000229595.6 |
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| CDS-3UTR GCA 90 bp | GGTCCAAAGACTGTCTGGGAGGCCAAGACATCTTTACAACCTGGTCTAATGATTGAGTCCTGGATTAGGTaGATCAGCCTGAAATACAAA | + |
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Preference number: 4 (lower is better) Translates to: GPKTVWEAKTSLQPGLMIESWIR*ISLKYK Trigger: TTTGTATTTCAGGCTGATGCACCTAATCCAGGACTC...AATCATTAGACCAGGTTGTAAAGATGTCTTGGCCTCCCAGACAGTCTTTGGACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000229595.6 |
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| CDS-3UTR CCA 90 bp | TATAATAGTAGCCATAAGAGGCTTCACGGTGGCTTGGAAAATTGGATCCTAAAGACAAACAATGGGAACTaGGGCTGGTTGCGGCACAAT | + |
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Preference number: 4 (lower is better) Translates to: YNSSHKRLHGGLENWILKTNNGN*GWLRHN Trigger: ATTGTGCCGCAACCAGCCCCAGTTCCCATTGTTTGT...CTTTAGGATCCAATTTTCCAAGCCACCGTGAAGCCTCTTATGGCTACTATTATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000229595.6 |
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| CDS-3UTR CCA 90 bp | GTAAACTTTGTTCTTTCAAAGGCCAGTAAAATAGTGGTCCAAAGACTGTCTGGGGGTCCAAAGACTGTCTaGGAGGCCAAGACATCTTTA | + |
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Preference number: 4 (lower is better) Translates to: VNFVLSKASKIVVQRLSGGPKTV*EAKTSL Trigger: TAAAGATGTCTTGGCCTCCCAGACAGTCTTTGGACC...CCCAGACAGTCTTTGGACCACTATTTTACTGGCCTTTGAAAGAACAAAGTTTAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000229595.6 |
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| CDS-3UTR TCA 90 bp | TCAAAGGCCAGTAAAATAGTGGTCCAAAGACTGTCTGGGAGGCCAAGACATCTTTCAAATGAACCAATTTaGGCCATTGTAATCCCCTAT | + |
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Preference number: 4 (lower is better) Translates to: SKASKIVVQRLSGRPRHLSNEPI*AIVIPY Trigger: ATAGGGGATTACAATGGCTCAAATTGGTTCATTTGA...AAGATGTCTTGGCCTCCCAGACAGTCTTTGGACCACTATTTTACTGGCCTTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000229595.6 |
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| CDS-3UTR GCA 90 bp | GGTCCAAAGACTGTCTGGGAGGCCAAGACATCTTTACAACCTGGTCTAATGATTACCAAACAAACCAAATaGTGTCCAACATCTCATGAA | + |
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Preference number: 4 (lower is better) Translates to: GPKTVWEAKTSLQPGLMITKQTK*CPTSHE Trigger: TTCATGAGATGTTGGACAGCATTTGGTTTGTTTGGT...AATCATTAGACCAGGTTGTAAAGATGTCTTGGCCTCCCAGACAGTCTTTGGACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000229595.6 |
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| CDS-3UTR GCA 90 bp | TCAAAGGCCAGTAAAATAGTGGTCCAAAGACTGTCTGGGAGGCCAAGACATCTTATCATATGGCTGTCTTaGTTAGCTGCAAGAATAATG | + |
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Preference number: 4 (lower is better) Translates to: SKASKIVVQRLSGRPRHLIIWLS*LAARIM Trigger: CATTATTCTTGCAGCTAAGCAAGACAGCCATATGAT...AAGATGTCTTGGCCTCCCAGACAGTCTTTGGACCACTATTTTACTGGCCTTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000229595.6 |
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| CDS-3UTR CCA 90 bp | GCCATATTTGTTCTTCTCTTACCAAACAAACCAAATGCTGTCCAACATCTCATGATCTGGAATGAGTCCTaGATTAGGTGCATCAGCCTG | + |
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Preference number: 4 (lower is better) Translates to: AIFVLLLPNKPNAVQHLMIWNES*IRCISL Trigger: CAGGCTGATGCACCTAATCCAGGACTCATTCCAGAT...CATGAGATGTTGGACAGCATTTGGTTTGTTTGGTAAGAGAAGAACAAATATGGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000229595.6 |
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| CDS-3UTR CCA 90 bp | GTAAACTTTGTTCTTTCAAAGGCCAGTAAAATAGTGGTCCAAAGACTGTCTGGGTACTGCATCTGCATCTaGAATGAGTCCTGGATTAGG | + |
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Preference number: 4 (lower is better) Translates to: VNFVLSKASKIVVQRLSGYCICI*NESWIR Trigger: CCTAATCCAGGACTCATTCCAGATGCAGATGCAGTA...CCCAGACAGTCTTTGGACCACTATTTTACTGGCCTTTGAAAGAACAAAGTTTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000229595.6 |
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| CDS-3UTR TCA 90 bp | TTAGATATGAAGGCACTGCATAACCTGCATCATATGGCTGTCTTGCTTAGCTGCGCCAAAATATTCCTTTaGAGCTTAGAAAAGTCTGGT | + |
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Preference number: 4 (lower is better) Translates to: LDMKALHNLHHMAVLLSCAKIFL*SLEKSG Trigger: ACCAGACTTTTCTAAGCTTCAAAGGAATATTTTGGC...GCAGCTAAGCAAGACAGCCATATGATGCAGGTTATGCAGTGCCTTCATATCTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000229595.6 |
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| CDS-3UTR TCA 90 bp | TTAGATATGAAGGCACTGCATAACCTGCATCATATGGCTGTCTTGCTTAGCTGCTGTGGGATTCTAACATaGCATTTAGTGAGTTTTCTG | + |
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Preference number: 4 (lower is better) Translates to: LDMKALHNLHHMAVLLSCCGILT*HLVSFL Trigger: CAGAAAACTCACTAAATGTCATGTTAGAATCCCACA...GCAGCTAAGCAAGACAGCCATATGATGCAGGTTATGCAGTGCCTTCATATCTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000229595.6 |
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| CDS-3UTR CCA 90 bp | GCCATATTTGTTCTTCTCTTACCAAACAAACCAAATGCTGTCCAACATCTCATGGTGAGTTTTCTGATGTaGACCATCCCTTTGATGCTG | + |
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Preference number: 4 (lower is better) Translates to: AIFVLLLPNKPNAVQHLMVSFLM*TIPLML Trigger: CAGCATCAAAGGGATGGTCCACATCAGAAAACTCAC...CATGAGATGTTGGACAGCATTTGGTTTGTTTGGTAAGAGAAGAACAAATATGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000229595.6 |
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| CDS-3UTR GCA 90 bp | GTAAACTTTGTTCTTTCAAAGGCCAGTAAAATAGTGGTCCAAAGACTGTCTGGGGACCCTGGGATTAGATaGCAAAATATTCCTTTGAAG | + |
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Preference number: 4 (lower is better) Translates to: VNFVLSKASKIVVQRLSGDPGIR*QNIPLK Trigger: CTTCAAAGGAATATTTTGGCATCTAATCCCAGGGTC...CCCAGACAGTCTTTGGACCACTATTTTACTGGCCTTTGAAAGAACAAAGTTTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000229595.6 |
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| CDS-3UTR GCA 90 bp | GTAAACTTTGTTCTTTCAAAGGCCAGTAAAATAGTGGTCCAAAGACTGTCTGGGGTAGATTTGGATTACTaGTCTCTGCATCTTCCAGTT | + |
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Preference number: 4 (lower is better) Translates to: VNFVLSKASKIVVQRLSGVDLDY*SLHLPV Trigger: AACTGGAAGATGCAGAGAGCAGTAATCCAAATCTAC...CCCAGACAGTCTTTGGACCACTATTTTACTGGCCTTTGAAAGAACAAAGTTTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000229595.6 |
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| CDS-3UTR GCA 90 bp | TATAATAGTAGCCATAAGAGGCTTCACGGTGGCTTGGAAAATTGGATCCTAAAGTGTCAACCACAAATATaGCTGATCTCATTCTGCATG | + |
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Preference number: 4 (lower is better) Translates to: YNSSHKRLHGGLENWILKCQPQI*LISFCM Trigger: CATGCAGAATGAGATCAGGCATATTTGTGGTTGACA...CTTTAGGATCCAATTTTCCAAGCCACCGTGAAGCCTCTTATGGCTACTATTATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000229595.6 |
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| CDS-3UTR CCA 90 bp | GCCATATTTGTTCTTCTCTTACCAAACAAACCAAATGCTGTCCAACATCTCATGATAACCTGCATCATATaGCTGTCTTGCTTAGCTGCA | + |
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Preference number: 4 (lower is better) Translates to: AIFVLLLPNKPNAVQHLMITCII*LSCLAA Trigger: TGCAGCTAAGCAAGACAGCCATATGATGCAGGTTAT...CATGAGATGTTGGACAGCATTTGGTTTGTTTGGTAAGAGAAGAACAAATATGGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000229595.6 |
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| CDS-3UTR TCA 90 bp | GCCATATTTGTTCTTCTCTTACCAAACAAACCAAATGCTGTCCAACATCTCATGTTAGGTGCATCAGCCTaGAATACAAACATATGCCTT | + |
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Preference number: 4 (lower is better) Translates to: AIFVLLLPNKPNAVQHLMLGASA*NTNICL Trigger: AAGGCATATGTTTGTATTTCAGGCTGATGCACCTAA...CATGAGATGTTGGACAGCATTTGGTTTGTTTGGTAAGAGAAGAACAAATATGGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000229595.6 |
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| CDS-3UTR TCA 90 bp | TATAATAGTAGCCATAAGAGGCTTCACGGTGGCTTGGAAAATTGGATCCTAAAGCTGTCCAACATCTCATaGACTATAATAGTAGCCATA | + |
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Preference number: 4 (lower is better) Translates to: YNSSHKRLHGGLENWILKLSNIS*TIIVAI Trigger: TATGGCTACTATTATAGTTCATGAGATGTTGGACAG...CTTTAGGATCCAATTTTCCAAGCCACCGTGAAGCCTCTTATGGCTACTATTATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000229595.6 |
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| CDS-3UTR CCA 90 bp | TATAATAGTAGCCATAAGAGGCTTCACGGTGGCTTGGAAAATTGGATCCTAAAGGACATCTTTACAACCTaGTCTAATGATTCCTGTTTC | + |
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Preference number: 4 (lower is better) Translates to: YNSSHKRLHGGLENWILKDIFTT*SNDSCF Trigger: GAAACAGGAATCATTAGACCAGGTTGTAAAGATGTC...CTTTAGGATCCAATTTTCCAAGCCACCGTGAAGCCTCTTATGGCTACTATTATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000229595.6 |
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| CDS-3UTR GCA 90 bp | GCCATATTTGTTCTTCTCTTACCAAACAAACCAAATGCTGTCCAACATCTCATGGTATTCTTCACTTTCTaGAGAGCCCACATAGATAAT | + |
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Preference number: 4 (lower is better) Translates to: AIFVLLLPNKPNAVQHLMVFFTF*RAHIDN Trigger: ATTATCTATGTGGGCTCTGCAGAAAGTGAAGAATAC...CATGAGATGTTGGACAGCATTTGGTTTGTTTGGTAAGAGAAGAACAAATATGGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000229595.6 |
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| CDS-3UTR CCA 90 bp | ATATTTGTTCTTCTCTTACCAAACAAACCAAATGCTGTCCAACATCTCATGAACTCTTCCCAATTAATGTaGAATCTTGTGACCCTGGGA | + |
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Preference number: 4 (lower is better) Translates to: IFVLLLPNKPNAVQHLMNSSQLM*NLVTLG Trigger: TCCCAGGGTCACAAGATTCCACATTAATTGGGAAGA...GTTCATGAGATGTTGGACAGCATTTGGTTTGTTTGGTAAGAGAAGAACAAATAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000229595.6 |
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| CDS-3UTR CAA 90 bp | TCAAAGGCCAGTAAAATAGTGGTCCAAAGACTGTCTGGGAGGCCAAGACATCTTGGGAACTGGGGCTGGTaGCGGCACAATAAAGTCCAG | + |
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Preference number: 5 (lower is better) Translates to: SKASKIVVQRLSGRPRHLGNWGW*RHNKVQ Trigger: CTGGACTTTATTGTGCCGCAACCAGCCCCAGTTCCC...AAGATGTCTTGGCCTCCCAGACAGTCTTTGGACCACTATTTTACTGGCCTTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000229595.6 |
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| CDS-3UTR CAA 90 bp | GGTCCAAAGACTGTCTGGGAGGCCAAGACATCTTTACAACCTGGTCTAATGATTGCACTCCACAGTGTTTaGCAGCTTTCCTATTTCACT | + |
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Preference number: 5 (lower is better) Translates to: GPKTVWEAKTSLQPGLMIALHSV*QLSYFT Trigger: AGTGAAATAGGAAAGCTGCAAAACACTGTGGAGTGC...AATCATTAGACCAGGTTGTAAAGATGTCTTGGCCTCCCAGACAGTCTTTGGACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000229595.6 |
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| CDS-3UTR CAA 90 bp | GTAAACTTTGTTCTTTCAAAGGCCAGTAAAATAGTGGTCCAAAGACTGTCTGGGATGTGGACCATCCCTTaGATGCTGAAGGTAATGCAT | + |
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Preference number: 5 (lower is better) Translates to: VNFVLSKASKIVVQRLSGMWTIP*MLKVMH Trigger: ATGCATTACCTTCAGCATCAAAGGGATGGTCCACAT...CCCAGACAGTCTTTGGACCACTATTTTACTGGCCTTTGAAAGAACAAAGTTTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000229595.6 |
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| CDS-3UTR CAA 90 bp | TCAAAGGCCAGTAAAATAGTGGTCCAAAGACTGTCTGGGAGGCCAAGACATCTTTTAAACACAGGGAGTTaGTATTTTCTCCCGATATTG | + |
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Preference number: 5 (lower is better) Translates to: SKASKIVVQRLSGRPRHLLNTGS*YFLPIL Trigger: CAATATCGGGAGAAAATACAAACTCCCTGTGTTTAA...AAGATGTCTTGGCCTCCCAGACAGTCTTTGGACCACTATTTTACTGGCCTTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000229595.6 |
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| CDS-3UTR CAA 90 bp | TTAGATATGAAGGCACTGCATAACCTGCATCATATGGCTGTCTTGCTTAGCTGCAAGGTAATGCATCTGTaGAAAGAAGTGACTGTAGAT | + |
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Preference number: 5 (lower is better) Translates to: LDMKALHNLHHMAVLLSCKVMHL*KEVTVD Trigger: ATCTACAGTCACTTCTTTCAACAGATGCATTACCTT...GCAGCTAAGCAAGACAGCCATATGATGCAGGTTATGCAGTGCCTTCATATCTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000229595.6 |
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| CDS-3UTR CAA 90 bp | GCCATATTTGTTCTTCTCTTACCAAACAAACCAAATGCTGTCCAACATCTCATGCGGTGGCTTGGAAAATaGGATCCTAAAGTTCTTGGT | + |
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Preference number: 5 (lower is better) Translates to: AIFVLLLPNKPNAVQHLMRWLGK*DPKVLG Trigger: ACCAAGAACTTTAGGATCCAATTTTCCAAGCCACCG...CATGAGATGTTGGACAGCATTTGGTTTGTTTGGTAAGAGAAGAACAAATATGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000229595.6 |
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| CDS CCA 90 bp | TTAATTTGTACTAAAGGGATGGTAGGTGGTCACATGCAGTCCATGTaGGATTCTAACATGACATTTAGTGAGTTTTCTGATGTGGACCAT | + |
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Preference number: 5 (lower is better) Translates to: LICTKGMVGGHMQSM*DSNMTFSEFSDVDH Trigger: ATGGTCCACATCAGAAAACTCACTAAATGTCATGTTAGAATCCCACATGGACTGCATGTGACCACCTACCATCCCTTTAGTACAAATTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000229595.6 |
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| CDS-3UTR CAA 90 bp | ATATTTGTTCTTCTCTTACCAAACAAACCAAATGCTGTCCAACATCTCATGAACAGGCTTCACGGTGGCTaGGAAAATTGGATCCTAAAG | + |
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Preference number: 5 (lower is better) Translates to: IFVLLLPNKPNAVQHLMNRLHGG*ENWILK Trigger: CTTTAGGATCCAATTTTCCAAGCCACCGTGAAGCCT...GTTCATGAGATGTTGGACAGCATTTGGTTTGTTTGGTAAGAGAAGAACAAATAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000229595.6 |
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| CDS-3UTR CAA 90 bp | GTAAACTTTGTTCTTTCAAAGGCCAGTAAAATAGTGGTCCAAAGACTGTCTGGGCATCATATGGCTGTCTaGCTTAGCTGCAAGAATAAT | + |
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Preference number: 5 (lower is better) Translates to: VNFVLSKASKIVVQRLSGHHMAV*LSCKNN Trigger: ATTATTCTTGCAGCTAAGCAAGACAGCCATATGATG...CCCAGACAGTCTTTGGACCACTATTTTACTGGCCTTTGAAAGAACAAAGTTTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000229595.6 |
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| CDS-3UTR CAA 90 bp | GCCATATTTGTTCTTCTCTTACCAAACAAACCAAATGCTGTCCAACATCTCATGTGCCAAAATATTCCTTaGAAGCTTAGAAAAGTCTGG | + |
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Preference number: 5 (lower is better) Translates to: AIFVLLLPNKPNAVQHLMCQNIP*KLRKVW Trigger: CCAGACTTTTCTAAGCTTCAAAGGAATATTTTGGCA...CATGAGATGTTGGACAGCATTTGGTTTGTTTGGTAAGAGAAGAACAAATATGGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000229595.6 |
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| CDS GCA 72 bp | CTCTTTTTATTTACACGGGAGCACTCCACAGTGTTTTaGAGCTTTCCTATTTCACTAAACTACAGCCCATTC | + |
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Preference number: 6 (lower is better) Translates to: LFLFTREHSTVF*SFPISLNYSPF Trigger: GAATGGGCTGTAGTTTAGTGAAATAGGAAAGCTGCAAAACACTGTGGAGTGCTCCCGTGTAAATAAAAAGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000229595.6 |
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| CDS CAA 72 bp | CCTCTTTTTATTTACACGGGAGCACTCCACAGTGTTTaGCAGCTTTCCTATTTCACTAAACTACAGCCCATT | + |
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Preference number: 6 (lower is better) Translates to: PLFIYTGALHSV*QLSYFTKLQPI Trigger: AATGGGCTGTAGTTTAGTGAAATAGGAAAGCTGCAAAACACTGTGGAGTGCTCCCGTGTAAATAAAAAGAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000229595.6 |
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| CDS GCA 72 bp | CCAATTAATGTGGAATCTTGTGACCCTGGGATTAGATaGCAAAATATTCCTTTGAAGCTTAGAAAAGTCTGG | + |
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Preference number: 6 (lower is better) Translates to: PINVESCDPGIR*QNIPLKLRKVW Trigger: CCAGACTTTTCTAAGCTTCAAAGGAATATTTTGGCATCTAATCCCAGGGTCACAAGATTCCACATTAATTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000229595.6 |
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| CDS GCA 72 bp | CATCTGTTGAAAGAAGTGACTGTAGATTTGGATTACTaGTCTCTGCATCTTCCAGTTTTTCTGTGTTATCTT | + |
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Preference number: 6 (lower is better) Translates to: HLLKEVTVDLDY*SLHLPVFLCYL Trigger: AAGATAACACAGAAAAACTGGAAGATGCAGAGAGCAGTAATCCAAATCTACAGTCACTTCTTTCAACAGATG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000229595.6 |
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