Pregenerated sensors for ASCL5 (Homo sapiens)
Ensembl gene IDs: ENSG00000232237Ensembl transcript IDs: ENST00000449188.2, ENST00000449188.3, ENST00000458416.2
Found 92 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCGCCGCGGACCTCCTACAGTCACCGTCCTGCGGCGCATCGCGGGTaGCCCAACAGCCTCCCGCTGCTCCCGAAAGTGGGACGGGGCCGG | + |
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Preference number: 1 (lower is better) Translates to: APRTSYSHRPAAHRG*PNSLPLLPKVGRGR Trigger: CCGGCCCCGTCCCACTTTCGGGAGCAGCGGGAGGCTGTTGGGTCACCCGCGATGCGCCGCAGGACGGTGACTGTAGGAGGTCCGCGGCGC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000449188.2 ENST00000458416.2 |
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| 3UTR CCA 90 bp | TCGTGCCCATCGTACCCGCTGCCCTGCACTTCCGCCCCAAGCTGGTaGAGGAGGGAGGGTGTCGCAGACACGGGAGCGCCGCGGACCTCC | + |
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Preference number: 1 (lower is better) Translates to: SCPSYPLPCTSAPSW*RREGVADTGAPRTS Trigger: GGAGGTCCGCGGCGCTCCCGTGTCTGCGACACCCTCCCTCCTCCACCAGCTTGGGGCGGAAGTGCAGGGCAGCGGGTACGATGGGCACGA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000449188.2 ENST00000458416.2 |
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| 3UTR GCA 90 bp | TGTCGCAGACACGGGAGCGCCGCGGACCTCCTACAGTCACCGTCCTaGGGCGCATCGCGGGTGACCCAACAGCCTCCCGCTGCTCCCGAA | + |
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Preference number: 1 (lower is better) Translates to: CRRHGSAADLLQSPS*GASRVTQQPPAAPE Trigger: TTCGGGAGCAGCGGGAGGCTGTTGGGTCACCCGCGATGCGCCGCAGGACGGTGACTGTAGGAGGTCCGCGGCGCTCCCGTGTCTGCGACA 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000449188.2 ENST00000458416.2 |
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| 3UTR TCA 90 bp | AGACTGGACTGCGCCTGCGGCAAGGAAGGACGGAGCAGAGCCACCTaGGGCCGAGCGGGAGCCAGACCCAGGGATGACCGTCCTGGGGAG | + |
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Preference number: 1 (lower is better) Translates to: RLDCACGKEGRSRAT*GRAGARPRDDRPGE Trigger: CTCCCCAGGACGGTCATCCCTGGGTCTGGCTCCCGCTCGGCCTCAGGTGGCTCTGCTCCGTCCTTCCTTGCCGCAGGCGCAGTCCAGTCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000449188.2 ENST00000458416.2 |
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| 3UTR GCA 90 bp | GGCCCTGCCCCTCGCTTCACCCACGGAGCTCCTAGGTCTCTATCGTaGCCATCGTACCCGCTGCCCTGCACTTCCGCCCCAAGCTGGTGG | + |
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Preference number: 1 (lower is better) Translates to: GPAPRFTHGAPRSLS*PSYPLPCTSAPSWW Trigger: CCACCAGCTTGGGGCGGAAGTGCAGGGCAGCGGGTACGATGGGCACGATAGAGACCTAGGAGCTCCGTGGGTGAAGCGAGGGGCAGGGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000449188.2 ENST00000458416.2 |
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| 3UTR CCA 90 bp | CCGAGGGCTCAAAGTCGGGCTCGCATCCCGGGGACTCGCAGAGACTaGACTGCGCCTGCGGCAAGGAAGGACGGAGCAGAGCCACCTGAG | + |
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Preference number: 1 (lower is better) Translates to: PRAQSRARIPGTRRD*TAPAARKDGAEPPE Trigger: CTCAGGTGGCTCTGCTCCGTCCTTCCTTGCCGCAGGCGCAGTCCAGTCTCTGCGAGTCCCCGGGATGCGAGCCCGACTTTGAGCCCTCGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000449188.2 ENST00000458416.2 |
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| 3UTR GCA 90 bp | CACGGAGCTCCTAGGTCTCTATCGTGCCCATCGTACCCGCTGCCCTaGACTTCCGCCCCAAGCTGGTGGAGGAGGGAGGGTGTCGCAGAC | + |
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Preference number: 1 (lower is better) Translates to: HGAPRSLSCPSYPLP*TSAPSWWRREGVAD Trigger: GTCTGCGACACCCTCCCTCCTCCACCAGCTTGGGGCGGAAGTGCAGGGCAGCGGGTACGATGGGCACGATAGAGACCTAGGAGCTCCGTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000449188.2 ENST00000458416.2 |
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| 3UTR CCA 90 bp | CACCGGGGCACACAGGTCGCCTCTGCTGAGTCTGTAGGTTCGGTCTaGGCTGAGCGCCAGCAGCAATCTGGCCTCCCATCCCTTCCTCTG | + |
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Preference number: 1 (lower is better) Translates to: HRGTQVASAESVGSV*AERQQQSGLPSLPL Trigger: CAGAGGAAGGGATGGGAGGCCAGATTGCTGCTGGCGCTCAGCCCAGACCGAACCTACAGACTCAGCAGAGGCGACCTGTGTGCCCCGGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000449188.2 ENST00000458416.2 |
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| 3UTR TCA 90 bp | CCTTTCTCGAGGAGTAAGCGTGCTCCCAAAGAAGTCGCTAGTATCTaGGGCCATCTGGTGGAGAGCAGTGGCATGGTAACCGAGGGCTCA | + |
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Preference number: 1 (lower is better) Translates to: PFSRSKRAPKEVASI*GHLVESSGMVTEGS Trigger: TGAGCCCTCGGTTACCATGCCACTGCTCTCCACCAGATGGCCTCAGATACTAGCGACTTCTTTGGGAGCACGCTTACTCCTCGAGAAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000449188.2 ENST00000458416.2 |
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| 3UTR-3UTR GCA 90 bp | GTGTCGCAGACACGGGAGCGCCGCGGACCTCCTACAGTCACCGTCCTGCGGCGCCCAACAGCCTCCCGCTaGTCCCGAAAGTGGGACGGG | + |
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Preference number: 2 (lower is better) Translates to: VSQTRERRGPPTVTVLRRPTASR*SRKWDG Trigger: CCCGTCCCACTTTCGGGAGCAGCGGGAGGCTGTTGG...GCGCCGCAGGACGGTGACTGTAGGAGGTCCGCGGCGCTCCCGTGTCTGCGACAC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000449188.2 ENST00000458416.2 |
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| 3UTR-3UTR CCA 90 bp | GAGGGAGGGTGTCGCAGACACGGGAGCGCCGCGGACCTCCTACAGTCACCGTCCCGCTGCTCCCGAAAGTaGGACGGGGCCGGCGGATCA | + |
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Preference number: 2 (lower is better) Translates to: EGGCRRHGSAADLLQSPSRCSRK*DGAGGS Trigger: TGATCCGCCGGCCCCGTCCCACTTTCGGGAGCAGCG...GGACGGTGACTGTAGGAGGTCCGCGGCGCTCCCGTGTCTGCGACACCCTCCCTC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000449188.2 ENST00000458416.2 |
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| 3UTR-3UTR GCA 90 bp | CATCCCGGGGACTCGCAGAGACTGGACTGCGCCTGCGGCAAGGAAGGACGGAGCAGCAGTCCCAGGCCCTaGCCCTCGCTTCACCCACGG | + |
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Preference number: 2 (lower is better) Translates to: HPGDSQRLDCACGKEGRSSSPRP*PSLHPR Trigger: CCGTGGGTGAAGCGAGGGGCAGGGCCTGGGACTGCT...GCTCCGTCCTTCCTTGCCGCAGGCGCAGTCCAGTCTCTGCGAGTCCCCGGGATG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000449188.2 ENST00000458416.2 |
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| 3UTR-3UTR CCA 90 bp | GAGGGCTCAAAGTCGGGCTCGCATCCCGGGGACTCGCAGAGACTGGACTGCGCCCGCTGCTCCCGAAAGTaGGACGGGGCCGGCGGATCA | + |
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Preference number: 2 (lower is better) Translates to: EGSKSGSHPGDSQRLDCARCSRK*DGAGGS Trigger: TGATCCGCCGGCCCCGTCCCACTTTCGGGAGCAGCG...GGCGCAGTCCAGTCTCTGCGAGTCCCCGGGATGCGAGCCCGACTTTGAGCCCTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000449188.2 ENST00000458416.2 |
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| 3UTR-3UTR GCA 90 bp | TCCCGGGGACTCGCAGAGACTGGACTGCGCCTGCGGCAAGGAAGGACGGAGCAGCTACAGTCACCGTCCTaGGGCGCATCGCGGGTGACC | + |
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Preference number: 2 (lower is better) Translates to: SRGLAETGLRLRQGRTEQLQSPS*GASRVT Trigger: GGTCACCCGCGATGCGCCGCAGGACGGTGACTGTAG...CTGCTCCGTCCTTCCTTGCCGCAGGCGCAGTCCAGTCTCTGCGAGTCCCCGGGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000449188.2 ENST00000458416.2 |
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| 3UTR-3UTR CCA 90 bp | GAGGGCTCAAAGTCGGGCTCGCATCCCGGGGACTCGCAGAGACTGGACTGCGCCTCCGCCCCAAGCTGGTaGAGGAGGGAGGGTGTCGCA | + |
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Preference number: 2 (lower is better) Translates to: EGSKSGSHPGDSQRLDCASAPSW*RREGVA Trigger: TGCGACACCCTCCCTCCTCCACCAGCTTGGGGCGGA...GGCGCAGTCCAGTCTCTGCGAGTCCCCGGGATGCGAGCCCGACTTTGAGCCCTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000449188.2 ENST00000458416.2 |
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| 3UTR-3UTR GCA 90 bp | GGACTCGCAGAGACTGGACTGCGCCTGCGGCAAGGAAGGACGGAGCAGAGCCACCCAACAGCCTCCCGCTaGTCCCGAAAGTGGGACGGG | + |
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Preference number: 2 (lower is better) Translates to: GLAETGLRLRQGRTEQSHPTASR*SRKWDG Trigger: CCCGTCCCACTTTCGGGAGCAGCGGGAGGCTGTTGG...GTGGCTCTGCTCCGTCCTTCCTTGCCGCAGGCGCAGTCCAGTCTCTGCGAGTCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000449188.2 ENST00000458416.2 |
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| 3UTR-3UTR CCA 90 bp | GGCCCTGCCCCTCGCTTCACCCACGGAGCTCCTAGGTCTCTATCGTGCCCATCGTCCGCCCCAAGCTGGTaGAGGAGGGAGGGTGTCGCA | + |
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Preference number: 2 (lower is better) Translates to: GPAPRFTHGAPRSLSCPSSAPSW*RREGVA Trigger: TGCGACACCCTCCCTCCTCCACCAGCTTGGGGCGGA...CGATGGGCACGATAGAGACCTAGGAGCTCCGTGGGTGAAGCGAGGGGCAGGGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000449188.2 ENST00000458416.2 |
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| 3UTR-3UTR GCA 90 bp | GTAACCGAGGGCTCAAAGTCGGGCTCGCATCCCGGGGACTCGCAGAGACTGGACTCGTACCCGCTGCCCTaGACTTCCGCCCCAAGCTGG | + |
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Preference number: 2 (lower is better) Translates to: VTEGSKSGSHPGDSQRLDSYPLP*TSAPSW Trigger: CCAGCTTGGGGCGGAAGTGCAGGGCAGCGGGTACGA...GTCCAGTCTCTGCGAGTCCCCGGGATGCGAGCCCGACTTTGAGCCCTCGGTTAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000449188.2 ENST00000458416.2 |
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| 3UTR-3UTR GCA 90 bp | GAGGGCTCAAAGTCGGGCTCGCATCCCGGGGACTCGCAGAGACTGGACTGCGCCCCTAGGTCTCTATCGTaGCCATCGTACCCGCTGCCC | + |
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Preference number: 2 (lower is better) Translates to: EGSKSGSHPGDSQRLDCAPRSLS*PSYPLP Trigger: GGGCAGCGGGTACGATGGGCACGATAGAGACCTAGG...GGCGCAGTCCAGTCTCTGCGAGTCCCCGGGATGCGAGCCCGACTTTGAGCCCTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000449188.2 ENST00000458416.2 |
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| 3UTR-3UTR GCA 90 bp | TTCCTCTGGGTTCCTTTCTCGAGGAGTAAGCGTGCTCCCAAAGAAGTCGCTAGTTCGTACCCGCTGCCCTaGACTTCCGCCCCAAGCTGG | + |
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Preference number: 2 (lower is better) Translates to: FLWVPFSRSKRAPKEVASSYPLP*TSAPSW Trigger: CCAGCTTGGGGCGGAAGTGCAGGGCAGCGGGTACGA...ACTAGCGACTTCTTTGGGAGCACGCTTACTCCTCGAGAAAGGAACCCAGAGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000449188.2 ENST00000458416.2 |
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| 3UTR-3UTR CCA 90 bp | TTCCTCTGGGTTCCTTTCTCGAGGAGTAAGCGTGCTCCCAAAGAAGTCGCTAGTGGGACTCGCAGAGACTaGACTGCGCCTGCGGCAAGG | + |
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Preference number: 2 (lower is better) Translates to: FLWVPFSRSKRAPKEVASGTRRD*TAPAAR Trigger: CCTTGCCGCAGGCGCAGTCCAGTCTCTGCGAGTCCC...ACTAGCGACTTCTTTGGGAGCACGCTTACTCCTCGAGAAAGGAACCCAGAGGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000449188.2 ENST00000458416.2 |
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| 3UTR-3UTR GCA 90 bp | TCCTCTGGGTTCCTTTCTCGAGGAGTAAGCGTGCTCCCAAAGAAGTCGCTAGTAAGACTGGACTGCGCCTaGGGCAAGGAAGGACGGAGC | + |
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Preference number: 2 (lower is better) Translates to: SSGFLSRGVSVLPKKSLVRLDCA*GKEGRS Trigger: GCTCCGTCCTTCCTTGCCGCAGGCGCAGTCCAGTCT...TACTAGCGACTTCTTTGGGAGCACGCTTACTCCTCGAGAAAGGAACCCAGAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000449188.2 ENST00000458416.2 |
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| 3UTR GCA 72 bp | CACGGGAGCGCCGCGGACCTCCTACAGTCACCGTCCTaGGGCGCATCGCGGGTGACCCAACAGCCTCCCGCT | + |
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Preference number: 3 (lower is better) Translates to: HGSAADLLQSPS*GASRVTQQPPA Trigger: AGCGGGAGGCTGTTGGGTCACCCGCGATGCGCCGCAGGACGGTGACTGTAGGAGGTCCGCGGCGCTCCCGTG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000449188.2 ENST00000458416.2 |
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| 3UTR CCA 72 bp | TCGTACCCGCTGCCCTGCACTTCCGCCCCAAGCTGGTaGAGGAGGGAGGGTGTCGCAGACACGGGAGCGCCG | + |
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Preference number: 3 (lower is better) Translates to: SYPLPCTSAPSW*RREGVADTGAP Trigger: CGGCGCTCCCGTGTCTGCGACACCCTCCCTCCTCCACCAGCTTGGGGCGGAAGTGCAGGGCAGCGGGTACGA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000449188.2 ENST00000458416.2 |
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| 3UTR TCA 72 bp | TGCGCCTGCGGCAAGGAAGGACGGAGCAGAGCCACCTaGGGCCGAGCGGGAGCCAGACCCAGGGATGACCGT | + |
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Preference number: 3 (lower is better) Translates to: CACGKEGRSRAT*GRAGARPRDDR Trigger: ACGGTCATCCCTGGGTCTGGCTCCCGCTCGGCCTCAGGTGGCTCTGCTCCGTCCTTCCTTGCCGCAGGCGCA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000449188.2 ENST00000458416.2 |
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| 3UTR GCA 72 bp | TCGGGCTCGCATCCCGGGGACTCGCAGAGACTGGACTaGGCCTGCGGCAAGGAAGGACGGAGCAGAGCCACC | + |
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Preference number: 3 (lower is better) Translates to: SGSHPGDSQRLD*ACGKEGRSRAT Trigger: GGTGGCTCTGCTCCGTCCTTCCTTGCCGCAGGCGCAGTCCAGTCTCTGCGAGTCCCCGGGATGCGAGCCCGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000449188.2 ENST00000458416.2 |
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| 3UTR TCA 72 bp | ACCTCCTACAGTCACCGTCCTGCGGCGCATCGCGGGTaGCCCAACAGCCTCCCGCTGCTCCCGAAAGTGGGA | + |
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Preference number: 3 (lower is better) Translates to: TSYSHRPAAHRG*PNSLPLLPKVG Trigger: TCCCACTTTCGGGAGCAGCGGGAGGCTGTTGGGTCACCCGCGATGCGCCGCAGGACGGTGACTGTAGGAGGT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000449188.2 ENST00000458416.2 |
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| 3UTR CCA 72 bp | CAAAGTCGGGCTCGCATCCCGGGGACTCGCAGAGACTaGACTGCGCCTGCGGCAAGGAAGGACGGAGCAGAG | + |
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Preference number: 3 (lower is better) Translates to: QSRARIPGTRRD*TAPAARKDGAE Trigger: CTCTGCTCCGTCCTTCCTTGCCGCAGGCGCAGTCCAGTCTCTGCGAGTCCCCGGGATGCGAGCCCGACTTTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000449188.2 ENST00000458416.2 |
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| 3UTR GCA 72 bp | CCTAGGTCTCTATCGTGCCCATCGTACCCGCTGCCCTaGACTTCCGCCCCAAGCTGGTGGAGGAGGGAGGGT | + |
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Preference number: 3 (lower is better) Translates to: PRSLSCPSYPLP*TSAPSWWRREG Trigger: ACCCTCCCTCCTCCACCAGCTTGGGGCGGAAGTGCAGGGCAGCGGGTACGATGGGCACGATAGAGACCTAGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000449188.2 ENST00000458416.2 |
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| 3UTR GCA 72 bp | CCTCGCTTCACCCACGGAGCTCCTAGGTCTCTATCGTaGCCATCGTACCCGCTGCCCTGCACTTCCGCCCCA | + |
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Preference number: 3 (lower is better) Translates to: PRFTHGAPRSLS*PSYPLPCTSAP Trigger: TGGGGCGGAAGTGCAGGGCAGCGGGTACGATGGGCACGATAGAGACCTAGGAGCTCCGTGGGTGAAGCGAGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000449188.2 ENST00000458416.2 |
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| 3UTR CCA 72 bp | ACACAGGTCGCCTCTGCTGAGTCTGTAGGTTCGGTCTaGGCTGAGCGCCAGCAGCAATCTGGCCTCCCATCC | + |
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Preference number: 3 (lower is better) Translates to: TQVASAESVGSV*AERQQQSGLPS Trigger: GGATGGGAGGCCAGATTGCTGCTGGCGCTCAGCCCAGACCGAACCTACAGACTCAGCAGAGGCGACCTGTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000449188.2 ENST00000458416.2 |
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| CDS-3UTR GCA 90 bp | CATCCCGGGGACTCGCAGAGACTGGACTGCGCCTGCGGCAAGGAAGGACGGAGCGCAGGAAGGGCACGTTaGCCAGGGGCTCGGCGGGGG | + |
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Preference number: 4 (lower is better) Translates to: HPGDSQRLDCACGKEGRSAGRAR*PGARRG Trigger: CCCCCGCCGAGCCCCTGGGCAACGTGCCCTTCCTGC...GCTCCGTCCTTCCTTGCCGCAGGCGCAGTCCAGTCTCTGCGAGTCCCCGGGATG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000458416.2 |
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| CDS-3UTR TCA 90 bp | TCCCGGGGACTCGCAGAGACTGGACTGCGCCTGCGGCAAGGAAGGACGGAGCAGCGGAGCAGAGCCACCTaGGGCCGAGCGGGAGCCAGA | + |
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Preference number: 4 (lower is better) Translates to: SRGLAETGLRLRQGRTEQRSRAT*GRAGAR Trigger: TCTGGCTCCCGCTCGGCCTCAGGTGGCTCTGCTCCG...CTGCTCCGTCCTTCCTTGCCGCAGGCGCAGTCCAGTCTCTGCGAGTCCCCGGGA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000458416.2 |
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| CDS-3UTR CCA 90 bp | CGCAGACACGGGAGCGCCGCGGACCTCCTACAGTCACCGTCCTGCGGCGCATCGGTAGGGCGGCTCTGCTaGGCCCGGGTACAGCAGGAA | + |
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Preference number: 4 (lower is better) Translates to: RRHGSAADLLQSPSCGASVGRLC*ARVQQE Trigger: TTCCTGCTGTACCCGGGCCCAGCAGAGCCGCCCTAC...CGATGCGCCGCAGGACGGTGACTGTAGGAGGTCCGCGGCGCTCCCGTGTCTGCG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000458416.2 |
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| CDS-3UTR TCA 90 bp | AGCCTCCCGCTGCTCCCGAAAGTGGGACGGGGCCGGCGGATCATCCTCCAAGCCGCAGGAGGACTCGGATaGCTCCGGCACCAGGGAGGA | + |
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Preference number: 4 (lower is better) Translates to: SLPLLPKVGRGRRIILQAAGGLG*LRHQGG Trigger: TCCTCCCTGGTGCCGGAGTCATCCGAGTCCTCCTGC...GGCTTGGAGGATGATCCGCCGGCCCCGTCCCACTTTCGGGAGCAGCGGGAGGCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000458416.2 |
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| CDS-3UTR GCA 90 bp | GAGGGAGGGTGTCGCAGACACGGGAGCGCCGCGGACCTCCTACAGTCACCGTCCGTAGTAGGGCGGCTCTaGTGGGCCCGGGTACAGCAG | + |
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Preference number: 4 (lower is better) Translates to: EGGCRRHGSAADLLQSPSVVGRL*WARVQQ Trigger: CTGCTGTACCCGGGCCCAGCAGAGCCGCCCTACTAC...GGACGGTGACTGTAGGAGGTCCGCGGCGCTCCCGTGTCTGCGACACCCTCCCTC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000458416.2 |
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| CDS-3UTR GCA 90 bp | GAGGGAGGGTGTCGCAGACACGGGAGCGCCGCGGACCTCCTACAGTCACCGTCCCCAACAGCCTCCCGCTaGTCCCGAAAGTGGGACGGG | + |
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Preference number: 4 (lower is better) Translates to: EGGCRRHGSAADLLQSPSPTASR*SRKWDG Trigger: CCCGTCCCACTTTCGGGAGCAGCGGGAGGCTGTTGG...GGACGGTGACTGTAGGAGGTCCGCGGCGCTCCCGTGTCTGCGACACCCTCCCTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000458416.2 |
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| CDS-3UTR GCA 90 bp | GAGGGCTCAAAGTCGGGCTCGCATCCCGGGGACTCGCAGAGACTGGACTGCGCCAGCAGTCCCAGGCCCTaGCCCTCGCTTCACCCACGG | + |
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Preference number: 4 (lower is better) Translates to: EGSKSGSHPGDSQRLDCASSPRP*PSLHPR Trigger: CCGTGGGTGAAGCGAGGGGCAGGGCCTGGGACTGCT...GGCGCAGTCCAGTCTCTGCGAGTCCCCGGGATGCGAGCCCGACTTTGAGCCCTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000458416.2 |
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| CDS-3UTR GCA 90 bp | GAGGGCTCAAAGTCGGGCTCGCATCCCGGGGACTCGCAGAGACTGGACTGCGCCTCGTACCCGCTGCCCTaGACTTCCGCCCCAAGCTGG | + |
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Preference number: 4 (lower is better) Translates to: EGSKSGSHPGDSQRLDCASYPLP*TSAPSW Trigger: CCAGCTTGGGGCGGAAGTGCAGGGCAGCGGGTACGA...GGCGCAGTCCAGTCTCTGCGAGTCCCCGGGATGCGAGCCCGACTTTGAGCCCTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000458416.2 |
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| CDS-3UTR GCA 90 bp | GGGGACTCGCAGAGACTGGACTGCGCCTGCGGCAAGGAAGGACGGAGCAGAGCCGCCCATCGTACCCGCTaGCCTGCACTTCCGCCCCAA | + |
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Preference number: 4 (lower is better) Translates to: GDSQRLDCACGKEGRSRAAHRTR*PALPPQ Trigger: TTGGGGCGGAAGTGCAGGGCAGCGGGTACGATGGGC...GGCTCTGCTCCGTCCTTCCTTGCCGCAGGCGCAGTCCAGTCTCTGCGAGTCCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000458416.2 |
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| CDS-3UTR CCA 90 bp | TCCCGGGGACTCGCAGAGACTGGACTGCGCCTGCGGCAAGGAAGGACGGAGCAGGGGACTCGCAGAGACTaGACTGCGCCTGCGGCAAGG | + |
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Preference number: 4 (lower is better) Translates to: SRGLAETGLRLRQGRTEQGTRRD*TAPAAR Trigger: CCTTGCCGCAGGCGCAGTCCAGTCTCTGCGAGTCCC...CTGCTCCGTCCTTCCTTGCCGCAGGCGCAGTCCAGTCTCTGCGAGTCCCCGGGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000458416.2 |
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| CDS-3UTR TCA 90 bp | CAGCCTCCCGCTGCTCCCGAAAGTGGGACGGGGCCGGCGGATCATCCTCCAAGCCGTTGCGCTTCTGGATaGAGGCTGGCTCGAAGGGGT | + |
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Preference number: 4 (lower is better) Translates to: QPPAAPESGTGPADHPPSRCASG*RLARRG Trigger: ACCCCTTCGAGCCAGCCTTCATCCAGAAGCGCAACG...GCTTGGAGGATGATCCGCCGGCCCCGTCCCACTTTCGGGAGCAGCGGGAGGCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000458416.2 |
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| CDS-3UTR GCA 90 bp | GAGGGAGGGTGTCGCAGACACGGGAGCGCCGCGGACCTCCTACAGTCACCGTCCCCTAGGTCTCTATCGTaGCCATCGTACCCGCTGCCC | + |
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Preference number: 4 (lower is better) Translates to: EGGCRRHGSAADLLQSPSPRSLS*PSYPLP Trigger: GGGCAGCGGGTACGATGGGCACGATAGAGACCTAGG...GGACGGTGACTGTAGGAGGTCCGCGGCGCTCCCGTGTCTGCGACACCCTCCCTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000458416.2 |
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| CDS-3UTR GCA 90 bp | AGCCTCCCGCTGCTCCCGAAAGTGGGACGGGGCCGGCGGATCATCCTCCAAGCCTCGCAGAGACTGGACTaGGCCTGCGGCAAGGAAGGA | + |
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Preference number: 4 (lower is better) Translates to: SLPLLPKVGRGRRIILQASQRLD*ACGKEG Trigger: TCCTTCCTTGCCGCAGGCGCAGTCCAGTCTCTGCGA...GGCTTGGAGGATGATCCGCCGGCCCCGTCCCACTTTCGGGAGCAGCGGGAGGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000458416.2 |
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| CDS-3UTR CCA 90 bp | GTGTCGCAGACACGGGAGCGCCGCGGACCTCCTACAGTCACCGTCCTGCGGCGCTCTGGTGGAGAGCAGTaGCATGGTAACCGAGGGCTC | + |
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Preference number: 4 (lower is better) Translates to: VSQTRERRGPPTVTVLRRSGGEQ*HGNRGL Trigger: GAGCCCTCGGTTACCATGCCACTGCTCTCCACCAGA...GCGCCGCAGGACGGTGACTGTAGGAGGTCCGCGGCGCTCCCGTGTCTGCGACAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000458416.2 |
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| CDS-3UTR CCA 90 bp | GAGGGAGGGTGTCGCAGACACGGGAGCGCCGCGGACCTCCTACAGTCACCGTCCGCGCCAGCAGCAATCTaGCCTCCCATCCCTTCCTCT | + |
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Preference number: 4 (lower is better) Translates to: EGGCRRHGSAADLLQSPSAPAAI*PPIPSS Trigger: AGAGGAAGGGATGGGAGGCCAGATTGCTGCTGGCGC...GGACGGTGACTGTAGGAGGTCCGCGGCGCTCCCGTGTCTGCGACACCCTCCCTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000458416.2 |
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| CDS-3UTR GCA 90 bp | ACAGTCACCGTCCTGCGGCGCATCGCGGGTGACCCAACAGCCTCCCGCTGCTCCCACAGGCCCGATCAATaGCAGGATTCCTCCGACTCC | + |
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Preference number: 4 (lower is better) Translates to: TVTVLRRIAGDPTASRCSHRPDQ*QDSSDS Trigger: GGAGTCGGAGGAATCCTGGCATTGATCGGGCCTGTG...GGAGCAGCGGGAGGCTGTTGGGTCACCCGCGATGCGCCGCAGGACGGTGACTGT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000458416.2 |
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| CDS-3UTR GCA 90 bp | GTAACCGAGGGCTCAAAGTCGGGCTCGCATCCCGGGGACTCGCAGAGACTGGACCTACAGTCACCGTCCTaGGGCGCATCGCGGGTGACC | + |
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Preference number: 4 (lower is better) Translates to: VTEGSKSGSHPGDSQRLDLQSPS*GASRVT Trigger: GGTCACCCGCGATGCGCCGCAGGACGGTGACTGTAG...GTCCAGTCTCTGCGAGTCCCCGGGATGCGAGCCCGACTTTGAGCCCTCGGTTAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000458416.2 |
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| CDS-3UTR CCA 90 bp | GTAACCGAGGGCTCAAAGTCGGGCTCGCATCCCGGGGACTCGCAGAGACTGGACTCCGCCCCAAGCTGGTaGAGGAGGGAGGGTGTCGCA | + |
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Preference number: 4 (lower is better) Translates to: VTEGSKSGSHPGDSQRLDSAPSW*RREGVA Trigger: TGCGACACCCTCCCTCCTCCACCAGCTTGGGGCGGA...GTCCAGTCTCTGCGAGTCCCCGGGATGCGAGCCCGACTTTGAGCCCTCGGTTAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000458416.2 |
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| CDS-3UTR TCA 90 bp | GTAACCGAGGGCTCAAAGTCGGGCTCGCATCCCGGGGACTCGCAGAGACTGGACGCGTCTCCACCTTGCTaGGTCGCTTCTCAGCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: VTEGSKSGSHPGDSQRLDASPPC*VASQPG Trigger: CCCTGGCTGAGAAGCGACTCAGCAAGGTGGAGACGC...GTCCAGTCTCTGCGAGTCCCCGGGATGCGAGCCCGACTTTGAGCCCTCGGTTAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000458416.2 |
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| CDS-3UTR TCA 90 bp | GAGCTCCTAGGTCTCTATCGTGCCCATCGTACCCGCTGCCCTGCACTTCCGCCCAGGTTCGGTCTGGGCTaGGCGCCAGCAGCAATCTGG | + |
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Preference number: 4 (lower is better) Translates to: ELLGLYRAHRTRCPALPPRFGLG*APAAIW Trigger: CCAGATTGCTGCTGGCGCTCAGCCCAGACCGAACCT...GGGCGGAAGTGCAGGGCAGCGGGTACGATGGGCACGATAGAGACCTAGGAGCTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000458416.2 |
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| CDS-3UTR TCA 90 bp | GAGGGCTCAAAGTCGGGCTCGCATCCCGGGGACTCGCAGAGACTGGACTGCGCCGAAGTCGCTAGTATCTaGGGCCATCTGGTGGAGAGC | + |
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Preference number: 4 (lower is better) Translates to: EGSKSGSHPGDSQRLDCAEVASI*GHLVES Trigger: GCTCTCCACCAGATGGCCTCAGATACTAGCGACTTC...GGCGCAGTCCAGTCTCTGCGAGTCCCCGGGATGCGAGCCCGACTTTGAGCCCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000458416.2 |
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| CDS-3UTR GCA 90 bp | GTGTCGCAGACACGGGAGCGCCGCGGACCTCCTACAGTCACCGTCCTGCGGCGCTTGGTGCCGACGCAGTaGCTATGTACCTATATGCAC | + |
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Preference number: 4 (lower is better) Translates to: VSQTRERRGPPTVTVLRRLVPTQ*LCTYMH Trigger: GTGCATATAGGTACATAGGCACTGCGTCGGCACCAA...GCGCCGCAGGACGGTGACTGTAGGAGGTCCGCGGCGCTCCCGTGTCTGCGACAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000458416.2 |
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| CDS-3UTR CCA 90 bp | GGGGACTCGCAGAGACTGGACTGCGCCTGCGGCAAGGAAGGACGGAGCAGAGCCCTTCTGGATGAAGGCTaGCTCGAAGGGGTATTCGTA | + |
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Preference number: 4 (lower is better) Translates to: GDSQRLDCACGKEGRSRALLDEG*LEGVFV Trigger: TACGAATACCCCTTCGAGCCAGCCTTCATCCAGAAG...GGCTCTGCTCCGTCCTTCCTTGCCGCAGGCGCAGTCCAGTCTCTGCGAGTCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000458416.2 |
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| CDS-3UTR GCA 90 bp | AGCCTCCCGCTGCTCCCGAAAGTGGGACGGGGCCGGCGGATCATCCTCCAAGCCTATTTAGCTCTTTGGTaGCGACGCAGTGCCTATGTA | + |
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Preference number: 4 (lower is better) Translates to: SLPLLPKVGRGRRIILQAYLALW*RRSAYV Trigger: TACATAGGCACTGCGTCGGCACCAAAGAGCTAAATA...GGCTTGGAGGATGATCCGCCGGCCCCGTCCCACTTTCGGGAGCAGCGGGAGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000458416.2 |
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| CDS-3UTR CCA 90 bp | CTAGGTCTCTATCGTGCCCATCGTACCCGCTGCCCTGCACTTCCGCCCCAAGCTGTATCTGAGGCCATCTaGTGGAGAGCAGTGGCATGG | + |
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Preference number: 4 (lower is better) Translates to: LGLYRAHRTRCPALPPQAVSEAI*WRAVAW Trigger: CCATGCCACTGCTCTCCACCAGATGGCCTCAGATAC...AGCTTGGGGCGGAAGTGCAGGGCAGCGGGTACGATGGGCACGATAGAGACCTAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000458416.2 |
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| CDS-3UTR CCA 90 bp | CCTAGGTCTCTATCGTGCCCATCGTACCCGCTGCCCTGCACTTCCGCCCCAAGCTCCCATCCCTTCCTCTaGGTTCCTTTCTCGAGGAGT | + |
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Preference number: 4 (lower is better) Translates to: PRSLSCPSYPLPCTSAPSSHPFL*VPFSRS Trigger: ACTCCTCGAGAAAGGAACCCAGAGGAAGGGATGGGA...GCTTGGGGCGGAAGTGCAGGGCAGCGGGTACGATGGGCACGATAGAGACCTAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000458416.2 |
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| CDS-3UTR CCA 90 bp | GAGCTCCTAGGTCTCTATCGTGCCCATCGTACCCGCTGCCCTGCACTTCCGCCCAGTCCCCACCCAACCTaGGACAAAACTAGACGACCT | + |
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Preference number: 4 (lower is better) Translates to: ELLGLYRAHRTRCPALPPSPHPT*DKTRRP Trigger: AGGTCGTCTAGTTTTGTCCCAGGTTGGGTGGGGACT...GGGCGGAAGTGCAGGGCAGCGGGTACGATGGGCACGATAGAGACCTAGGAGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000458416.2 |
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| CDS-3UTR CCA 90 bp | TTCCTCTGGGTTCCTTTCTCGAGGAGTAAGCGTGCTCCCAAAGAAGTCGCTAGTCGCTGCTCCCGAAAGTaGGACGGGGCCGGCGGATCA | + |
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Preference number: 4 (lower is better) Translates to: FLWVPFSRSKRAPKEVASRCSRK*DGAGGS Trigger: TGATCCGCCGGCCCCGTCCCACTTTCGGGAGCAGCG...ACTAGCGACTTCTTTGGGAGCACGCTTACTCCTCGAGAAAGGAACCCAGAGGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000458416.2 |
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| CDS-3UTR GCA 90 bp | CCTTCCTCTGGGTTCCTTTCTCGAGGAGTAAGCGTGCTCCCAAAGAAGTCGCTAAGACTGGACTGCGCCTaGGGCAAGGAAGGACGGAGC | + |
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Preference number: 4 (lower is better) Translates to: PSSGFLSRGVSVLPKKSLRLDCA*GKEGRS Trigger: GCTCCGTCCTTCCTTGCCGCAGGCGCAGTCCAGTCT...TAGCGACTTCTTTGGGAGCACGCTTACTCCTCGAGAAAGGAACCCAGAGGAAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000458416.2 |
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| CDS-3UTR CCA 90 bp | TCCTCTGGGTTCCTTTCTCGAGGAGTAAGCGTGCTCCCAAAGAAGTCGCTAGTAACTTCCGCCCCAAGCTaGTGGAGGAGGGAGGGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SSGFLSRGVSVLPKKSLVTSAPS*WRREGV Trigger: GACACCCTCCCTCCTCCACCAGCTTGGGGCGGAAGT...TACTAGCGACTTCTTTGGGAGCACGCTTACTCCTCGAGAAAGGAACCCAGAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000458416.2 |
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| CDS-3UTR TCA 90 bp | TCCTCTGGGTTCCTTTCTCGAGGAGTAAGCGTGCTCCCAAAGAAGTCGCTAGTAACAGGTCGCCTCTGCTaGGTCTGTAGGTTCGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SSGFLSRGVSVLPKKSLVTGRLC*VCRFGL Trigger: CAGACCGAACCTACAGACTCAGCAGAGGCGACCTGT...TACTAGCGACTTCTTTGGGAGCACGCTTACTCCTCGAGAAAGGAACCCAGAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000458416.2 |
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| CDS-3UTR CCA 90 bp | TCCTCTGGGTTCCTTTCTCGAGGAGTAAGCGTGCTCCCAAAGAAGTCGCTAGTATCTGTAGGTTCGGTCTaGGCTGAGCGCCAGCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: SSGFLSRGVSVLPKKSLVSVGSV*AERQQQ Trigger: TTGCTGCTGGCGCTCAGCCCAGACCGAACCTACAGA...TACTAGCGACTTCTTTGGGAGCACGCTTACTCCTCGAGAAAGGAACCCAGAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000458416.2 |
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| CDS CCA 90 bp | GGCCCCTCTCAGGAGGTCGGTGCACGCCTTCTCAGAGCCAGCCCATaGCGCCGCGGAACTCTGAGGGCCCGCACCCCGTTCCGCAGCACC | + |
|
Preference number: 5 (lower is better) Translates to: GPSQEVGARLLRASP*RRGTLRARTPFRST Trigger: GGTGCTGCGGAACGGGGTGCGGGCCCTCAGAGTTCCGCGGCGCCATGGGCTGGCTCTGAGAAGGCGTGCACCGACCTCCTGAGAGGGGCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000449188.3 |
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| CDS-3UTR CAA 90 bp | ACAGTCACCGTCCTGCGGCGCATCGCGGGTGACCCAACAGCCTCCCGCTGCTCCAGCAGGAAGGGCACGTaGCCCAGGGGCTCGGCGGGG | + |
|
Preference number: 5 (lower is better) Translates to: TVTVLRRIAGDPTASRCSSRKGT*PRGSAG Trigger: CCCCGCCGAGCCCCTGGGCAACGTGCCCTTCCTGCT...GGAGCAGCGGGAGGCTGTTGGGTCACCCGCGATGCGCCGCAGGACGGTGACTGT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000458416.2 |
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| CDS TCA 90 bp | CTCCGACTCCAAGAAAGGCGACGGGGAGAAGCAGGAGGACTCGGATaGCTCCGGCACCAGGGAGGAGGGCGCCCGGGCCTCGCCGTCGCC | + |
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Preference number: 5 (lower is better) Translates to: LRLQERRRGEAGGLG*LRHQGGGRPGLAVA Trigger: GGCGACGGCGAGGCCCGGGCGCCCTCCTCCCTGGTGCCGGAGTCATCCGAGTCCTCCTGCTTCTCCCCGTCGCCTTTCTTGGAGTCGGAG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000449188.3 ENST00000458416.2 |
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| CDS CCA 90 bp | GGCCTAAACCACGGGCTCCATGTCCTCCACACCCACCCCAGCGCCTaGTCCTTGGTCCTCGCGGCCTTCGGGATCCCCGGGCTGTCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: GLNHGLHVLHTHPSA*SLVLAAFGIPGLSG Trigger: CCCGGACAGCCCGGGGATCCCGAAGGCCGCGAGGACCAAGGACCAGGCGCTGGGGTGGGTGTGGAGGACATGGAGCCCGTGGTTTAGGCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000449188.3 |
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| CDS TCA 90 bp | TCGGTGCACGCCTTCTCAGAGCCAGCCCATGGCGCCGCGGAACTCTaGGGGCCCGCACCCCGTTCCGCAGCACCCATGGGCATGGCCACA | + |
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Preference number: 5 (lower is better) Translates to: SVHAFSEPAHGAAEL*GPAPRSAAPMGMAT Trigger: TGTGGCCATGCCCATGGGTGCTGCGGAACGGGGTGCGGGCCCTCAGAGTTCCGCGGCGCCATGGGCTGGCTCTGAGAAGGCGTGCACCGA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000449188.3 |
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| CDS-3UTR CAA 90 bp | GTGTCGCAGACACGGGAGCGCCGCGGACCTCCTACAGTCACCGTCCTGCGGCGCCCCTCGTTGACGCACTaGACTCGCTGCCTCTCGCGC | + |
|
Preference number: 5 (lower is better) Translates to: VSQTRERRGPPTVTVLRRPSLTH*TRCLSR Trigger: GCGCGAGAGGCAGCGAGTCAAGTGCGTCAACGAGGG...GCGCCGCAGGACGGTGACTGTAGGAGGTCCGCGGCGCTCCCGTGTCTGCGACAC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000458416.2 |
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| CDS GCA 90 bp | GAGGCCTCCGGTCCACCAGAGCCCGGCAGAAGTTATTGTTCATGGTaGCGCGTGGAGCTGGACCCAGAGCGAGGCCTCCACCGAATGGCC | + |
|
Preference number: 5 (lower is better) Translates to: EASGPPEPGRSYCSW*RVELDPERGLHRMA Trigger: GGCCATTCGGTGGAGGCCTCGCTCTGGGTCCAGCTCCACGCGGCACCATGAACAATAACTTCTGCCGGGCTCTGGTGGACCGGAGGCCTC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000449188.3 |
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| CDS CCA 90 bp | CACCAGAGCCCGGCAGAAGTTATTGTTCATGGTGCCGCGTGGAGCTaGACCCAGAGCGAGGCCTCCACCGAATGGCCCCGGCTTGGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: HQSPAEVIVHGAAWS*TQSEASTEWPRLGV Trigger: GACCCCAAGCCGGGGCCATTCGGTGGAGGCCTCGCTCTGGGTCCAGCTCCACGCGGCACCATGAACAATAACTTCTGCCGGGCTCTGGTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000449188.3 |
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| CDS CCA 90 bp | CCGGTCCACCAGAGCCCGGCAGAAGTTATTGTTCATGGTGCCGCGTaGAGCTGGACCCAGAGCGAGGCCTCCACCGAATGGCCCCGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: PVHQSPAEVIVHGAA*SWTQSEASTEWPRL Trigger: AAGCCGGGGCCATTCGGTGGAGGCCTCGCTCTGGGTCCAGCTCCACGCGGCACCATGAACAATAACTTCTGCCGGGCTCTGGTGGACCGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000449188.3 |
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| CDS GCA 90 bp | AAGAGCCATCGCCCTAGACAAGTGTGGCCCCTCTCAGGAGGTCGGTaGACGCCTTCTCAGAGCCAGCCCATGGCGCCGCGGAACTCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: KSHRPRQVWPLSGGR*TPSQSQPMAPRNSE Trigger: CTCAGAGTTCCGCGGCGCCATGGGCTGGCTCTGAGAAGGCGTGCACCGACCTCCTGAGAGGGGCCACACTTGTCTAGGGCGATGGCTCTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000449188.3 |
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| CDS CCA 90 bp | CCAGAGGCCTCCGGTCCACCAGAGCCCGGCAGAAGTTATTGTTCATaGTGCCGCGTGGAGCTGGACCCAGAGCGAGGCCTCCACCGAATG | + |
|
Preference number: 5 (lower is better) Translates to: PEASGPPEPGRSYCS*CRVELDPERGLHRM Trigger: CATTCGGTGGAGGCCTCGCTCTGGGTCCAGCTCCACGCGGCACCATGAACAATAACTTCTGCCGGGCTCTGGTGGACCGGAGGCCTCTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000449188.3 |
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| CDS-3UTR CAA 90 bp | CATCCCGGGGACTCGCAGAGACTGGACTGCGCCTGCGGCAAGGAAGGACGGAGCCTTTTATTTAGCTCTTaGGTGCCGACGCAGTGCCTA | + |
|
Preference number: 5 (lower is better) Translates to: HPGDSQRLDCACGKEGRSLLFSS*VPTQCL Trigger: TAGGCACTGCGTCGGCACCAAAGAGCTAAATAAAAG...GCTCCGTCCTTCCTTGCCGCAGGCGCAGTCCAGTCTCTGCGAGTCCCCGGGATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000458416.2 |
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| CDS TCA 72 bp | GCCTTCTCAGAGCCAGCCCATGGCGCCGCGGAACTCTaGGGGCCCGCACCCCGTTCCGCAGCACCCATGGGC | + |
|
Preference number: 6 (lower is better) Translates to: AFSEPAHGAAEL*GPAPRSAAPMG Trigger: GCCCATGGGTGCTGCGGAACGGGGTGCGGGCCCTCAGAGTTCCGCGGCGCCATGGGCTGGCTCTGAGAAGGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000449188.3 |
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| CDS CCA 72 bp | GAGGGCCCGCACCCCGTTCCGCAGCACCCATGGGCATaGCCACAGACCCGCCCACCCTGCCTCTTGCTGCCA | + |
|
Preference number: 6 (lower is better) Translates to: EGPHPVPQHPWA*PQTRPPCLLLP Trigger: TGGCAGCAAGAGGCAGGGTGGGCGGGTCTGTGGCCATGCCCATGGGTGCTGCGGAACGGGGTGCGGGCCCTC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000449188.3 |
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| CDS CCA 72 bp | TCCATGTCCTCCACACCCACCCCAGCGCCTGGTCCTTaGTCCTCGCGGCCTTCGGGATCCCCGGGCTGTCCG | + |
|
Preference number: 6 (lower is better) Translates to: SMSSTPTPAPGP*SSRPSGSPGCP Trigger: CGGACAGCCCGGGGATCCCGAAGGCCGCGAGGACCAAGGACCAGGCGCTGGGGTGGGTGTGGAGGACATGGA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000449188.3 |
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| CDS CCA 72 bp | CAGGAGGTCGGTGCACGCCTTCTCAGAGCCAGCCCATaGCGCCGCGGAACTCTGAGGGCCCGCACCCCGTTC | + |
|
Preference number: 6 (lower is better) Translates to: QEVGARLLRASP*RRGTLRARTPF Trigger: GAACGGGGTGCGGGCCCTCAGAGTTCCGCGGCGCCATGGGCTGGCTCTGAGAAGGCGTGCACCGACCTCCTG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000449188.3 |
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| CDS CAA 72 bp | CTCCATGTCCTCCACACCCACCCCAGCGCCTGGTCCTaGGTCCTCGCGGCCTTCGGGATCCCCGGGCTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: LHVLHTHPSAWS*VLAAFGIPGLS Trigger: GGACAGCCCGGGGATCCCGAAGGCCGCGAGGACCAAGGACCAGGCGCTGGGGTGGGTGTGGAGGACATGGAG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000449188.3 |
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| CDS TCA 72 bp | CAAGAAAGGCGACGGGGAGAAGCAGGAGGACTCGGATaGCTCCGGCACCAGGGAGGAGGGCGCCCGGGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: QERRRGEAGGLG*LRHQGGGRPGL Trigger: GAGGCCCGGGCGCCCTCCTCCCTGGTGCCGGAGTCATCCGAGTCCTCCTGCTTCTCCCCGTCGCCTTTCTTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000449188.3 ENST00000458416.2 |
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| CDS CCA 72 bp | CACCCCCGCATAGGCGTCGTAGTAGGGCGGCTCTGCTaGGCCCGGGTACAGCAGGAAGGGCACGTTGCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: HPRIGVVVGRLC*ARVQQEGHVAQ Trigger: CTGGGCAACGTGCCCTTCCTGCTGTACCCGGGCCCAGCAGAGCCGCCCTACTACGACGCCTATGCGGGGGTG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000449188.3 ENST00000458416.2 |
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| CDS CAA 90 bp | GGGGGCCCCAGAGGCCTCCGGTCCACCAGAGCCCGGCAGAAGTTATaGTTCATGGTGCCGCGTGGAGCTGGACCCAGAGCGAGGCCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: GGPRGLRSTRARQKL*FMVPRGAGPRARPP Trigger: TGGAGGCCTCGCTCTGGGTCCAGCTCCACGCGGCACCATGAACAATAACTTCTGCCGGGCTCTGGTGGACCGGAGGCCTCTGGGGCCCCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000449188.3 |
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| CDS GCA 72 bp | GAACACCCCCGCATAGGCGTCGTAGTAGGGCGGCTCTaGTGGGCCCGGGTACAGCAGGAAGGGCACGTTGCC | + |
|
Preference number: 6 (lower is better) Translates to: EHPRIGVVVGRL*WARVQQEGHVA Trigger: GGCAACGTGCCCTTCCTGCTGTACCCGGGCCCAGCAGAGCCGCCCTACTACGACGCCTATGCGGGGGTGTTC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000449188.3 ENST00000458416.2 |
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| CDS CCA 72 bp | GACCCAGAGCGAGGCCTCCACCGAATGGCCCCGGCTTaGGGTCTGCACCGTCTCCACCAGTGGGGCAAGTCA | + |
|
Preference number: 6 (lower is better) Translates to: DPERGLHRMAPA*GLHRLHQWGKS Trigger: TGACTTGCCCCACTGGTGGAGACGGTGCAGACCCCAAGCCGGGGCCATTCGGTGGAGGCCTCGCTCTGGGTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000449188.3 |
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| CDS GCA 72 bp | ATCCTCCAAGCCGGGGGCGGCCACAGGCCCGATCAATaGCAGGATTCCTCCGACTCCAAGAAAGGCGACGGG | + |
|
Preference number: 6 (lower is better) Translates to: ILQAGGGHRPDQ*QDSSDSKKGDG Trigger: CCCGTCGCCTTTCTTGGAGTCGGAGGAATCCTGGCATTGATCGGGCCTGTGGCCGCCCCCGGCTTGGAGGAT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000449188.3 ENST00000458416.2 |
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| CDS CCA 72 bp | CCGGCAGAAGTTATTGTTCATGGTGCCGCGTGGAGCTaGACCCAGAGCGAGGCCTCCACCGAATGGCCCCGG | + |
|
Preference number: 6 (lower is better) Translates to: PAEVIVHGAAWS*TQSEASTEWPR Trigger: CCGGGGCCATTCGGTGGAGGCCTCGCTCTGGGTCCAGCTCCACGCGGCACCATGAACAATAACTTCTGCCGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000449188.3 |
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| CDS GCA 72 bp | GGTCCACCAGAGCCCGGCAGAAGTTATTGTTCATGGTaGCGCGTGGAGCTGGACCCAGAGCGAGGCCTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: GPPEPGRSYCSW*RVELDPERGLH Trigger: GTGGAGGCCTCGCTCTGGGTCCAGCTCCACGCGGCACCATGAACAATAACTTCTGCCGGGCTCTGGTGGACC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000449188.3 |
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| CDS CCA 72 bp | TCCGGTCCACCAGAGCCCGGCAGAAGTTATTGTTCATaGTGCCGCGTGGAGCTGGACCCAGAGCGAGGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: SGPPEPGRSYCS*CRVELDPERGL Trigger: GAGGCCTCGCTCTGGGTCCAGCTCCACGCGGCACCATGAACAATAACTTCTGCCGGGCTCTGGTGGACCGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000449188.3 |
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| CDS CAA 72 bp | AGAGGCCTCCGGTCCACCAGAGCCCGGCAGAAGTTATaGTTCATGGTGCCGCGTGGAGCTGGACCCAGAGCG | + |
|
Preference number: 6 (lower is better) Translates to: RGLRSTRARQKL*FMVPRGAGPRA Trigger: CGCTCTGGGTCCAGCTCCACGCGGCACCATGAACAATAACTTCTGCCGGGCTCTGGTGGACCGGAGGCCTCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000449188.3 |
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| CDS CCA 72 bp | CAGAGCCCGGCAGAAGTTATTGTTCATGGTGCCGCGTaGAGCTGGACCCAGAGCGAGGCCTCCACCGAATGG | + |
|
Preference number: 6 (lower is better) Translates to: QSPAEVIVHGAA*SWTQSEASTEW Trigger: CCATTCGGTGGAGGCCTCGCTCTGGGTCCAGCTCCACGCGGCACCATGAACAATAACTTCTGCCGGGCTCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000449188.3 |
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| CDS CCA 72 bp | AAACTGATGGCTGCTGTTAGGAGTGCGCCAGCTCAGTaGAGGGAGTCCCCGGGAACATTTCTCTCTGGGTTT | + |
|
Preference number: 6 (lower is better) Translates to: KLMAAVRSAPAQ*RESPGTFLSGF Trigger: AAACCCAGAGAGAAATGTTCCCGGGGACTCCCTCCACTGAGCTGGCGCACTCCTAACAGCAGCCATCAGTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000449188.3 |
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