Pregenerated sensors for ASCL3 (Homo sapiens)
Ensembl gene IDs: ENSG00000176009Ensembl transcript IDs: ENST00000531618.1
Found 19 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | CAGAGTAAGGGGATGACACCGGGGCCTCTGGGTGCACGTGGAAAGTaGCCATGGGCTCCAGATAGAAGGACCTGGTCAGTGGCAAGCGGG | + |
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Preference number: 5 (lower is better) Translates to: QSKGMTPGPLGARGK*PWAPDRRTWSVASG Trigger: CCCGCTTGCCACTGACCAGGTCCTTCTATCTGGAGCCCATGGTCACTTTCCACGTGCACCCAGAGGCCCCGGTGTCATCCCCTTACTCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000531618.1 |
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| CDS TCA 90 bp | AATACTCCTCTGGCAGATGATGGCGGAGCTGGGCGTAGCCTTCATTaGCACATTTCACCCGCTGCCTTTCCCGCTCATTCCTTTTCCGGG | + |
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Preference number: 5 (lower is better) Translates to: NTPLADDGGAGRSLH*HISPAAFPAHSFSG Trigger: CCCGGAAAAGGAATGAGCGGGAAAGGCAGCGGGTGAAATGTGTCAATGAAGGCTACGCCCAGCTCCGCCATCATCTGCCAGAGGAGTATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000531618.1 |
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| CDS CCA 90 bp | CCGGGTGAAGGCTGGCCCGTAGGAGTACTCGCACCCTCTGTAATTTaGATAAGGCATCGGGAAAGAGAAGGGGCAGGGTTCACTGTAATT | + |
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Preference number: 5 (lower is better) Translates to: PGEGWPVGVLAPSVI*IRHREREGAGFTVI Trigger: AATTACAGTGAACCCTGCCCCTTCTCTTTCCCGATGCCTTATCCAAATTACAGAGGGTGCGAGTACTCCTACGGGCCAGCCTTCACCCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000531618.1 |
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| CDS CCA 90 bp | TTTCACCCGCTGCCTTTCCCGCTCATTCCTTTTCCGGGTGAAGGCTaGCCCGTAGGAGTACTCGCACCCTCTGTAATTTGGATAAGGCAT | + |
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Preference number: 5 (lower is better) Translates to: FHPLPFPLIPFPGEG*PVGVLAPSVIWIRH Trigger: ATGCCTTATCCAAATTACAGAGGGTGCGAGTACTCCTACGGGCCAGCCTTCACCCGGAAAAGGAATGAGCGGGAAAGGCAGCGGGTGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000531618.1 |
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| CDS GCA 90 bp | AACTCAAACAATTCTGAACATAGGGTCAGCATGGTGGCTGGTGGTTaGTATCATGGAGGAAACTTTTCCAGGGTTATTCTTGGTCTCAGC | + |
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Preference number: 5 (lower is better) Translates to: NSNNSEHRVSMVAGG*YHGGNFSRVILGLS Trigger: GCTGAGACCAAGAATAACCCTGGAAAAGTTTCCTCCATGATAGCAACCACCAGCCACCATGCTGACCCTATGTTCAGAATTGTTTGAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000531618.1 |
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| CDS CCA 90 bp | TTGGAAACAGCAACTCAAACAATTCTGAACATAGGGTCAGCATGGTaGCTGGTGGTTGCTATCATGGAGGAAACTTTTCCAGGGTTATTC | + |
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Preference number: 5 (lower is better) Translates to: LETATQTILNIGSAW*LVVAIMEETFPGLF Trigger: GAATAACCCTGGAAAAGTTTCCTCCATGATAGCAACCACCAGCCACCATGCTGACCCTATGTTCAGAATTGTTTGAGTTGCTGTTTCCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000531618.1 |
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| CDS CCA 90 bp | TATTTGGAAACAGCAACTCAAACAATTCTGAACATAGGGTCAGCATaGTGGCTGGTGGTTGCTATCATGGAGGAAACTTTTCCAGGGTTA | + |
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Preference number: 5 (lower is better) Translates to: YLETATQTILNIGSA*WLVVAIMEETFPGL Trigger: TAACCCTGGAAAAGTTTCCTCCATGATAGCAACCACCAGCCACCATGCTGACCCTATGTTCAGAATTGTTTGAGTTGCTGTTTCCAAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000531618.1 |
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| CDS TCA 72 bp | TCACCCGCTGCCTTTCCCGCTCATTCCTTTTCCGGGTaGAGGCTGGCCCGTAGGAGTACTCGCACCCTCTGT | + |
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Preference number: 6 (lower is better) Translates to: SPAAFPAHSFSG*RLARRSTRTLC Trigger: ACAGAGGGTGCGAGTACTCCTACGGGCCAGCCTTCACCCGGAAAAGGAATGAGCGGGAAAGGCAGCGGGTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000531618.1 |
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| CDS TCA 72 bp | CTGGCAGATGATGGCGGAGCTGGGCGTAGCCTTCATTaGCACATTTCACCCGCTGCCTTTCCCGCTCATTCC | + |
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Preference number: 6 (lower is better) Translates to: LADDGGAGRSLH*HISPAAFPAHS Trigger: GGAATGAGCGGGAAAGGCAGCGGGTGAAATGTGTCAATGAAGGCTACGCCCAGCTCCGCCATCATCTGCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000531618.1 |
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| CDS CCA 72 bp | CTGCCTTTCCCGCTCATTCCTTTTCCGGGTGAAGGCTaGCCCGTAGGAGTACTCGCACCCTCTGTAATTTGG | + |
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Preference number: 6 (lower is better) Translates to: LPFPLIPFPGEG*PVGVLAPSVIW Trigger: CCAAATTACAGAGGGTGCGAGTACTCCTACGGGCCAGCCTTCACCCGGAAAAGGAATGAGCGGGAAAGGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000531618.1 |
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| CDS CCA 72 bp | TTCCACTTTGCTGAGTCGCTTCTCCAAATACTCCTCTaGCAGATGATGGCGGAGCTGGGCGTAGCCTTCATT | + |
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Preference number: 6 (lower is better) Translates to: FHFAESLLQILL*QMMAELGVAFI Trigger: AATGAAGGCTACGCCCAGCTCCGCCATCATCTGCCAGAGGAGTATTTGGAGAAGCGACTCAGCAAAGTGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000531618.1 |
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| CDS CAA 90 bp | GACCTGGTCAGTGGCAAGCGGGCAGAATCAGGGAAGATAGGAAGTTaGTCAGGTAGACTAGAGTTGCCTCTGTTGTCCATCATTTCCTCT | + |
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Preference number: 6 (lower is better) Translates to: DLVSGKRAESGKIGS*SGRLELPLLSIISS Trigger: AGAGGAAATGATGGACAACAGAGGCAACTCTAGTCTACCTGACAAACTTCCTATCTTCCCTGATTCTGCCCGCTTGCCACTGACCAGGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000531618.1 |
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| CDS CAA 72 bp | AGTGGCAAGCGGGCAGAATCAGGGAAGATAGGAAGTTaGTCAGGTAGACTAGAGTTGCCTCTGTTGTCCATC | + |
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Preference number: 6 (lower is better) Translates to: SGKRAESGKIGS*SGRLELPLLSI Trigger: GATGGACAACAGAGGCAACTCTAGTCTACCTGACAAACTTCCTATCTTCCCTGATTCTGCCCGCTTGCCACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000531618.1 |
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| CDS CCA 72 bp | GCAACTCAAACAATTCTGAACATAGGGTCAGCATGGTaGCTGGTGGTTGCTATCATGGAGGAAACTTTTCCA | + |
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Preference number: 6 (lower is better) Translates to: ATQTILNIGSAW*LVVAIMEETFP Trigger: TGGAAAAGTTTCCTCCATGATAGCAACCACCAGCCACCATGCTGACCCTATGTTCAGAATTGTTTGAGTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000531618.1 |
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| CDS CAA 90 bp | CGGGCAGAATCAGGGAAGATAGGAAGTTTGTCAGGTAGACTAGAGTaGCCTCTGTTGTCCATCATTTCCTCTTTAACCTGCAAACATAAC | + |
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Preference number: 6 (lower is better) Translates to: RAESGKIGSLSGRLE*PLLSIISSLTCKHN Trigger: GTTATGTTTGCAGGTTAAAGAGGAAATGATGGACAACAGAGGCAACTCTAGTCTACCTGACAAACTTCCTATCTTCCCTGATTCTGCCCG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000531618.1 |
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| CDS GCA 72 bp | AATTCTGAACATAGGGTCAGCATGGTGGCTGGTGGTTaGTATCATGGAGGAAACTTTTCCAGGGTTATTCTT | + |
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Preference number: 6 (lower is better) Translates to: NSEHRVSMVAGG*YHGGNFSRVIL Trigger: AAGAATAACCCTGGAAAAGTTTCCTCCATGATAGCAACCACCAGCCACCATGCTGACCCTATGTTCAGAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000531618.1 |
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| CDS CAA 72 bp | TCAGGGAAGATAGGAAGTTTGTCAGGTAGACTAGAGTaGCCTCTGTTGTCCATCATTTCCTCTTTAACCTGC | + |
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Preference number: 6 (lower is better) Translates to: SGKIGSLSGRLE*PLLSIISSLTC Trigger: GCAGGTTAAAGAGGAAATGATGGACAACAGAGGCAACTCTAGTCTACCTGACAAACTTCCTATCTTCCCTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000531618.1 |
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| CDS CAA 72 bp | GTTGCTATCATGGAGGAAACTTTTCCAGGGTTATTCTaGGTCTCAGCTTTATCAGGGTACAGAAGAGACTGC | + |
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Preference number: 6 (lower is better) Translates to: VAIMEETFPGLF*VSALSGYRRDC Trigger: GCAGTCTCTTCTGTACCCTGATAAAGCTGAGACCAAGAATAACCCTGGAAAAGTTTCCTCCATGATAGCAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000531618.1 |
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| CDS CCA 72 bp | TTGCTATCATGGAGGAAACTTTTCCAGGGTTATTCTTaGTCTCAGCTTTATCAGGGTACAGAAGAGACTGCA | + |
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Preference number: 6 (lower is better) Translates to: LLSWRKLFQGYS*SQLYQGTEETA Trigger: TGCAGTCTCTTCTGTACCCTGATAAAGCTGAGACCAAGAATAACCCTGGAAAAGTTTCCTCCATGATAGCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000531618.1 |
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