Pregenerated sensors for ASCL2 (Homo sapiens)
Ensembl gene IDs: ENSG00000183734Ensembl transcript IDs: ENST00000331289.5
Found 69 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCAGCCCTTATGGGGCCAGCTCCAAGCCCGTTTCCACCGCGGCATTaGTCAGGCTGGGCCGGACGAACGAGGCGGCGTCGGCGGTGCGGG | + |
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Preference number: 1 (lower is better) Translates to: PALMGPAPSPFPPRH*SGWAGRTRRRRRCG Trigger: CCCGCACCGCCGACGCCGCCTCGTTCGTCCGGCCCAGCCTGACCAATGCCGCGGTGGAAACGGGCTTGGAGCTGGCCCCATAAGGGCTGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000331289.5 |
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| 3UTR CCA 90 bp | GAAGCTGTGGGGAGGGGCGGCGTCGGAGGAAGCCGCCAGCCCTTATaGGGCCAGCTCCAAGCCCGTTTCCACCGCGGCATTGGTCAGGCT | + |
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Preference number: 1 (lower is better) Translates to: EAVGRGGVGGSRQPL*GQLQARFHRGIGQA Trigger: AGCCTGACCAATGCCGCGGTGGAAACGGGCTTGGAGCTGGCCCCATAAGGGCTGGCGGCTTCCTCCGACGCCGCCCCTCCCCACAGCTTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000331289.5 |
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| 3UTR CAA 90 bp | GCCAGCCCTTATGGGGCCAGCTCCAAGCCCGTTTCCACCGCGGCATaGGTCAGGCTGGGCCGGACGAACGAGGCGGCGTCGGCGGTGCGG | + |
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Preference number: 2 (lower is better) Translates to: ASPYGASSKPVSTAA*VRLGRTNEAASAVR Trigger: CCGCACCGCCGACGCCGCCTCGTTCGTCCGGCCCAGCCTGACCAATGCCGCGGTGGAAACGGGCTTGGAGCTGGCCCCATAAGGGCTGGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000331289.5 |
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| 3UTR-3UTR CCA 90 bp | GCTCCCTTGAAGAGGTGTGCCCCACACAGGCTTCTCCCTAGCAGAGCAGCAGTGCGGCATTGGTCAGGCTaGGCCGGACGAACGAGGCGG | + |
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Preference number: 2 (lower is better) Translates to: APLKRCAPHRLLPSRAAVRHWSG*AGRTRR Trigger: CCGCCTCGTTCGTCCGGCCCAGCCTGACCAATGCCG...CACTGCTGCTCTGCTAGGGAGAAGCCTGTGTGGGGCACACCTCTTCAAGGGAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000331289.5 |
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| 3UTR-3UTR CCA 90 bp | CACGCTCCCTTGAAGAGGTGTGCCCCACACAGGCTTCTCCCTAGCAGAGCAGCAAGCCGCCAGCCCTTATaGGGCCAGCTCCAAGCCCGT | + |
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Preference number: 2 (lower is better) Translates to: HAPLKRCAPHRLLPSRAASRQPL*GQLQAR Trigger: ACGGGCTTGGAGCTGGCCCCATAAGGGCTGGCGGCT...TGCTGCTCTGCTAGGGAGAAGCCTGTGTGGGGCACACCTCTTCAAGGGAGCGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000331289.5 |
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| 3UTR-3UTR CCA 90 bp | CCCCAGGTCAAGGGTTCTTTGTACAAAAATAGGTCTCCGTTTGCCAGCAGTGTCGCAGTCGAGAAGCTGTaGGGAGGGGCGGCGTCGGAG | + |
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Preference number: 2 (lower is better) Translates to: PQVKGSLYKNRSPFASSVAVEKL*GGAASE Trigger: CTCCGACGCCGCCCCTCCCCACAGCTTCTCGACTGC...GACACTGCTGGCAAACGGAGACCTATTTTTGTACAAAGAACCCTTGACCTGGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000331289.5 |
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| 3UTR-3UTR GCA 90 bp | GTCCAGGTCATCTTTATTACGCCCCAGGTCAAGGGTTCTTTGTACAAAAATAGGATCTCCAAGTGTTGGTaGCCCCCGCCCCACTGCAGT | + |
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Preference number: 2 (lower is better) Translates to: VQVIFITPQVKGSLYKNRISKCW*PPPHCS Trigger: ACTGCAGTGGGGCGGGGGGCACCAACACTTGGAGAT...CCTATTTTTGTACAAAGAACCCTTGACCTGGGGCGTAATAAAGATGACCTGGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000331289.5 |
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| 3UTR CAA 90 bp | TTACGCCCCAGGTCAAGGGTTCTTTGTACAAAAATAGGTCTCCGTTaGCCAGCAGTGTCCCTCCAGCAGCTCAAGTTAATGTGTAGAAAA | + |
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Preference number: 2 (lower is better) Translates to: LRPRSRVLCTKIGLR*PAVSLQQLKLMCRK Trigger: TTTTCTACACATTAACTTGAGCTGCTGGAGGGACACTGCTGGCAAACGGAGACCTATTTTTGTACAAAGAACCCTTGACCTGGGGCGTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000331289.5 |
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| 3UTR CCA 72 bp | GCTCCAAGCCCGTTTCCACCGCGGCATTGGTCAGGCTaGGCCGGACGAACGAGGCGGCGTCGGCGGTGCGGG | + |
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Preference number: 3 (lower is better) Translates to: APSPFPPRHWSG*AGRTRRRRRCG Trigger: CCCGCACCGCCGACGCCGCCTCGTTCGTCCGGCCCAGCCTGACCAATGCCGCGGTGGAAACGGGCTTGGAGC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000331289.5 |
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| 3UTR CCA 72 bp | ATGGGGCCAGCTCCAAGCCCGTTTCCACCGCGGCATTaGTCAGGCTGGGCCGGACGAACGAGGCGGCGTCGG | + |
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Preference number: 3 (lower is better) Translates to: MGPAPSPFPPRH*SGWAGRTRRRR Trigger: CCGACGCCGCCTCGTTCGTCCGGCCCAGCCTGACCAATGCCGCGGTGGAAACGGGCTTGGAGCTGGCCCCAT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000331289.5 |
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| 3UTR CCA 72 bp | GGGAGGGGCGGCGTCGGAGGAAGCCGCCAGCCCTTATaGGGCCAGCTCCAAGCCCGTTTCCACCGCGGCATT | + |
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Preference number: 3 (lower is better) Translates to: GRGGVGGSRQPL*GQLQARFHRGI Trigger: AATGCCGCGGTGGAAACGGGCTTGGAGCTGGCCCCATAAGGGCTGGCGGCTTCCTCCGACGCCGCCCCTCCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000331289.5 |
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| 3UTR-3UTR CAA 90 bp | CCCACAAACCCACCCCAGGGTGGGCTGTCACGGGGGCCTCACGCCAGGGACCCCGCTCGTGTCCAGATCTaGGCCAGCATGGAAAACTCC | + |
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Preference number: 3 (lower is better) Translates to: PTNPPQGGLSRGPHARDPARVQI*ASMENS Trigger: GGAGTTTTCCATGCTGGCCAAGATCTGGACACGAGC...GGGGTCCCTGGCGTGAGGCCCCCGTGACAGCCCACCCTGGGGTGGGTTTGTGGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000331289.5 |
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| 3UTR-3UTR CAA 90 bp | CACGCTCCCTTGAAGAGGTGTGCCCCACACAGGCTTCTCCCTAGCAGAGCAGCAGTTTCCACCGCGGCATaGGTCAGGCTGGGCCGGACG | + |
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Preference number: 3 (lower is better) Translates to: HAPLKRCAPHRLLPSRAAVSTAA*VRLGRT Trigger: CGTCCGGCCCAGCCTGACCAATGCCGCGGTGGAAAC...TGCTGCTCTGCTAGGGAGAAGCCTGTGTGGGGCACACCTCTTCAAGGGAGCGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000331289.5 |
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| CDS-3UTR GCA 90 bp | CCGCGGCATTGGTCAGGCTGGGCCGGACGAACGAGGCGGCGTCGGCGGTGCGGGCCAGCTTCACGCGGTTaGGCTCGCGCTCATTGCGCC | + |
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Preference number: 4 (lower is better) Translates to: PRHWSGWAGRTRRRRRCGPASRG*ARAHCA Trigger: GGCGCAATGAGCGCGAGCGCAACCGCGTGAAGCTGG...CCCGCACCGCCGACGCCGCCTCGTTCGTCCGGCCCAGCCTGACCAATGCCGCGG 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000331289.5 |
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| CDS-3UTR GCA 90 bp | AGGGGCGGCGTCGGAGGAAGCCGCCAGCCCTTATGGGGCCAGCTCCAAGCCCGTTTGCTGGCGCCGCCGTaGGGCACGTGCTGCCGCAGC | + |
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Preference number: 4 (lower is better) Translates to: RGGVGGSRQPLWGQLQARLLAPP*GTCCRS Trigger: GCTGCGGCAGCACGTGCCGCACGGCGGCGCCAGCAA...ACGGGCTTGGAGCTGGCCCCATAAGGGCTGGCGGCTTCCTCCGACGCCGCCCCT 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000331289.5 |
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| CDS-3UTR CCA 90 bp | CCCGTTTCCACCGCGGCATTGGTCAGGCTGGGCCGGACGAACGAGGCGGCGTCGACGCGCCAGGGAGCGTaGGACGCTCGTGTCCCGCGC | + |
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Preference number: 4 (lower is better) Translates to: PVSTAALVRLGRTNEAASTRQGA*DARVPR Trigger: GCGCGGGACACGAGCGTCCCACGCTCCCTGGCGCGT...CGACGCCGCCTCGTTCGTCCGGCCCAGCCTGACCAATGCCGCGGTGGAAACGGG 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000331289.5 |
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| CDS-3UTR GCA 90 bp | CCCACAAACCCACCCCAGGGTGGGCTGTCACGGGGGCCTCACGCCAGGGACCCCCGCGCCGCAGGAAGGTaGAGGCAGAGGAACCGGAGG | + |
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Preference number: 4 (lower is better) Translates to: PTNPPQGGLSRGPHARDPRAAGR*RQRNRR Trigger: CCTCCGGTTCCTCTGCCTGCACCTTCCTGCGGCGCG...GGGGTCCCTGGCGTGAGGCCCCCGTGACAGCCCACCCTGGGGTGGGTTTGTGGG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000331289.5 |
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| CDS-3UTR GCA 90 bp | CCCGTTTCCACCGCGGCATTGGTCAGGCTGGGCCGGACGAACGAGGCGGCGTCGTGCGCTCGCGCTCATTaGGCCGCGCTACGGCCGCTG | + |
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Preference number: 4 (lower is better) Translates to: PVSTAALVRLGRTNEAASCARAH*AALRPL Trigger: CAGCGGCCGTAGCGCGGCGCAATGAGCGCGAGCGCA...CGACGCCGCCTCGTTCGTCCGGCCCAGCCTGACCAATGCCGCGGTGGAAACGGG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000331289.5 |
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| CDS-3UTR CCA 90 bp | AGTCGAGAAGCTGTGGGGAGGGGCGGCGTCGGAGGAAGCCGCCAGCCCTTATGGCCCCAAGGGGGCTTCTaGCACGGCGCCGCCAGGCAA | + |
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Preference number: 4 (lower is better) Translates to: SREAVGRGGVGGSRQPLWPQGGF*HGAARQ Trigger: TTGCCTGGCGGCGCCGTGCCAGAAGCCCCCTTGGGG...CCATAAGGGCTGGCGGCTTCCTCCGACGCCGCCCCTCCCCACAGCTTCTCGACT 70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000331289.5 |
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| CDS-3UTR GCA 90 bp | GCCCTTATGGGGCCAGCTCCAAGCCCGTTTCCACCGCGGCATTGGTCAGGCTGGCGGACCTGGGCAGTGTaGCGCCGTCCATCGCGCCTG | + |
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Preference number: 4 (lower is better) Translates to: ALMGPAPSPFPPRHWSGWRTWAV*RRPSRL Trigger: CAGGCGCGATGGACGGCGGCACACTGCCCAGGTCCG...CCAGCCTGACCAATGCCGCGGTGGAAACGGGCTTGGAGCTGGCCCCATAAGGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000331289.5 |
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| CDS-3UTR CCA 90 bp | TGCCCACAAACCCACCCCAGGGTGGGCTGTCACGGGGGCCTCACGCCAGGGACCTGCTGCCGCAGCGCCTaGAAGCCCAAGTTCACCAGC | + |
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Preference number: 4 (lower is better) Translates to: CPQTHPRVGCHGGLTPGTCCRSA*KPKFTS Trigger: GCTGGTGAACTTGGGCTTCCAGGCGCTGCGGCAGCA...GGTCCCTGGCGTGAGGCCCCCGTGACAGCCCACCCTGGGGTGGGTTTGTGGGCA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000331289.5 |
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| 3UTR CAA 72 bp | TATGGGGCCAGCTCCAAGCCCGTTTCCACCGCGGCATaGGTCAGGCTGGGCCGGACGAACGAGGCGGCGTCG | + |
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Preference number: 4 (lower is better) Translates to: YGASSKPVSTAA*VRLGRTNEAAS Trigger: CGACGCCGCCTCGTTCGTCCGGCCCAGCCTGACCAATGCCGCGGTGGAAACGGGCTTGGAGCTGGCCCCATA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000331289.5 |
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| CDS-3UTR GCA 90 bp | GCTCCCTTGAAGAGGTGTGCCCCACACAGGCTTCTCCCTAGCAGAGCAGCAGTGCTCCCGCCAGCGCGTTaGGCACGGCGTCGTGCTCGG | + |
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Preference number: 4 (lower is better) Translates to: APLKRCAPHRLLPSRAAVLPPAR*ARRRAR Trigger: CCGAGCACGACGCCGTGCGCAACGCGCTGGCGGGAG...CACTGCTGCTCTGCTAGGGAGAAGCCTGTGTGGGGCACACCTCTTCAAGGGAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000331289.5 |
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| CDS-3UTR GCA 90 bp | AGAGCAGCAGTGCCCACAAACCCACCCCAGGGTGGGCTGTCACGGGGGCCTCACCCGCCCCTCAGGGACTaGTCGTGTCCAGATCTTGGC | + |
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Preference number: 4 (lower is better) Translates to: RAAVPTNPPQGGLSRGPHPPLRD*SCPDLG Trigger: GCCAAGATCTGGACACGAGCAGTCCCTGAGGGGCGG...GTGAGGCCCCCGTGACAGCCCACCCTGGGGTGGGTTTGTGGGCACTGCTGCTCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000331289.5 |
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| CDS-3UTR GCA 90 bp | CCCTTATGGGGCCAGCTCCAAGCCCGTTTCCACCGCGGCATTGGTCAGGCTGGGATCTCCAAGTGTTGGTaGCCCCCGCCCCACTGCAGT | + |
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Preference number: 4 (lower is better) Translates to: PLWGQLQARFHRGIGQAGISKCW*PPPHCS Trigger: ACTGCAGTGGGGCGGGGGGCACCAACACTTGGAGAT...CCCAGCCTGACCAATGCCGCGGTGGAAACGGGCTTGGAGCTGGCCCCATAAGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000331289.5 |
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| CDS-3UTR GCA 90 bp | AGAGCAGCAGTGCCCACAAACCCACCCCAGGGTGGGCTGTCACGGGGGCCTCACTCCCTTGAAGAGGTGTaGCCCACACAGGCTTCTCCC | + |
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Preference number: 4 (lower is better) Translates to: RAAVPTNPPQGGLSRGPHSLEEV*PTQASP Trigger: GGGAGAAGCCTGTGTGGGGCACACCTCTTCAAGGGA...GTGAGGCCCCCGTGACAGCCCACCCTGGGGTGGGTTTGTGGGCACTGCTGCTCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000331289.5 |
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| CDS-3UTR GCA 90 bp | CACGCTCCCTTGAAGAGGTGTGCCCCACACAGGCTTCTCCCTAGCAGAGCAGCACCTTGCTCAGCTTCTTaGTGGCGCCGCCGTGCGGCA | + |
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Preference number: 4 (lower is better) Translates to: HAPLKRCAPHRLLPSRAAPCSAS*WRRRAA Trigger: TGCCGCACGGCGGCGCCAGCAAGAAGCTGAGCAAGG...TGCTGCTCTGCTAGGGAGAAGCCTGTGTGGGGCACACCTCTTCAAGGGAGCGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000331289.5 |
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| CDS-3UTR GCA 90 bp | GTCCAGGTCATCTTTATTACGCCCCAGGTCAAGGGTTCTTTGTACAAAAATAGGCCGTGCGGCACGTGCTaGCGCAGCGCCTGGAAGCCC | + |
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Preference number: 4 (lower is better) Translates to: VQVIFITPQVKGSLYKNRPCGTC*RSAWKP Trigger: GGGCTTCCAGGCGCTGCGGCAGCACGTGCCGCACGG...CCTATTTTTGTACAAAGAACCCTTGACCTGGGGCGTAATAAAGATGACCTGGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000331289.5 |
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| CDS-3UTR CCA 90 bp | GGGTCCAGGTCATCTTTATTACGCCCCAGGTCAAGGGTTCTTTGTACAAAAATACAGGGGGCGCGGACCTaGGCAGTGTGCCGCCGTCCA | + |
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Preference number: 4 (lower is better) Translates to: GSRSSLLRPRSRVLCTKIQGART*AVCRRP Trigger: TGGACGGCGGCACACTGCCCAGGTCCGCGCCCCCTG...TATTTTTGTACAAAGAACCCTTGACCTGGGGCGTAATAAAGATGACCTGGACCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000331289.5 |
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| CDS-3UTR GCA 90 bp | GGGTCCAGGTCATCTTTATTACGCCCCAGGTCAAGGGTTCTTTGTACAAAAATACTCGTGTCCCGCGCGTaGGGCCGGACTCTCCCAGGT | + |
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Preference number: 4 (lower is better) Translates to: GSRSSLLRPRSRVLCTKILVSRA*GRTLPG Trigger: ACCTGGGAGAGTCCGGCCGCACGCGCGGGACACGAG...TATTTTTGTACAAAGAACCCTTGACCTGGGGCGTAATAAAGATGACCTGGACCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000331289.5 |
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| CDS-3UTR GCA 90 bp | GGGTCCAGGTCATCTTTATTACGCCCCAGGTCAAGGGTTCTTTGTACAAAAATATTGCGCACGGCGTCGTaGTCGGCCAGCAGGCGCTGC | + |
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Preference number: 4 (lower is better) Translates to: GSRSSLLRPRSRVLCTKILRTAS*SASRRC Trigger: GCAGCGCCTGCTGGCCGAGCACGACGCCGTGCGCAA...TATTTTTGTACAAAGAACCCTTGACCTGGGGCGTAATAAAGATGACCTGGACCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000331289.5 |
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| CDS-3UTR GCA 90 bp | ATCTTTATTACGCCCCAGGTCAAGGGTTCTTTGTACAAAAATAGGTCTCCGTTTCCGCCGTGCGGCACGTaGTGCCGCAGCGCCTGGAAG | + |
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Preference number: 4 (lower is better) Translates to: IFITPQVKGSLYKNRSPFPPCGT*CRSAWK Trigger: CTTCCAGGCGCTGCGGCAGCACGTGCCGCACGGCGG...AAACGGAGACCTATTTTTGTACAAAGAACCCTTGACCTGGGGCGTAATAAAGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000331289.5 |
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| CDS-3UTR CCA 90 bp | TACAAAAATAGGTCTCCGTTTGCCAGCAGTGTCCCTCCAGCAGCTCAAGTTAATTGCTCAGCTTCTTGCTaGCGCCGCCGTGCGGCACGT | + |
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Preference number: 4 (lower is better) Translates to: YKNRSPFASSVPPAAQVNCSASC*RRRAAR Trigger: ACGTGCCGCACGGCGGCGCCAGCAAGAAGCTGAGCA...ATTAACTTGAGCTGCTGGAGGGACACTGCTGGCAAACGGAGACCTATTTTTGTA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000331289.5 |
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| CDS-3UTR GCA 90 bp | ATCTTTATTACGCCCCAGGTCAAGGGTTCTTTGTACAAAAATAGGTCTCCGTTTGCCGTCCATCGCGCCTaGATCCACCCGCCCGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: IFITPQVKGSLYKNRSPFAVHRA*IHPPAP Trigger: TGGAGCGGGCGGGTGGATGCAGGCGCGATGGACGGC...AAACGGAGACCTATTTTTGTACAAAGAACCCTTGACCTGGGGCGTAATAAAGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000331289.5 |
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| CDS-3UTR CCA 90 bp | GGGTCCAGGTCATCTTTATTACGCCCCAGGTCAAGGGTTCTTTGTACAAAAATATTTCCACCGCGGCATTaGTCAGGCTGGGCCGGACGA | + |
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Preference number: 4 (lower is better) Translates to: GSRSSLLRPRSRVLCTKIFPPRH*SGWAGR Trigger: TCGTCCGGCCCAGCCTGACCAATGCCGCGGTGGAAA...TATTTTTGTACAAAGAACCCTTGACCTGGGGCGTAATAAAGATGACCTGGACCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000331289.5 |
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| CDS-3UTR CCA 90 bp | ATCTTTATTACGCCCCAGGTCAAGGGTTCTTTGTACAAAAATAGGTCTCCGTTTGCAGTCGAGAAGCTGTaGGGAGGGGCGGCGTCGGAG | + |
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Preference number: 4 (lower is better) Translates to: IFITPQVKGSLYKNRSPFAVEKL*GGAASE Trigger: CTCCGACGCCGCCCCTCCCCACAGCTTCTCGACTGC...AAACGGAGACCTATTTTTGTACAAAGAACCCTTGACCTGGGGCGTAATAAAGAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000331289.5 |
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| CDS-3UTR CCA 90 bp | ATCTTTATTACGCCCCAGGTCAAGGGTTCTTTGTACAAAAATAGGTCTCCGTTTAAACCCACCCCAGGGTaGGCTGTCACGGGGGCCTCA | + |
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Preference number: 4 (lower is better) Translates to: IFITPQVKGSLYKNRSPFKPTPG*AVTGAS Trigger: TGAGGCCCCCGTGACAGCCCACCCTGGGGTGGGTTT...AAACGGAGACCTATTTTTGTACAAAGAACCCTTGACCTGGGGCGTAATAAAGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000331289.5 |
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| CDS-3UTR TCA 90 bp | GGGTCCAGGTCATCTTTATTACGCCCCAGGTCAAGGGTTCTTTGTACAAAAATAAAGTTCACGCTCCCTTaGAGAGGTGTGCCCCACACA | + |
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Preference number: 4 (lower is better) Translates to: GSRSSLLRPRSRVLCTKIKFTLP*RGVPHT Trigger: TGTGTGGGGCACACCTCTTCAAGGGAGCGTGAACTT...TATTTTTGTACAAAGAACCCTTGACCTGGGGCGTAATAAAGATGACCTGGACCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000331289.5 |
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| 3UTR CAA 72 bp | AGGTCAAGGGTTCTTTGTACAAAAATAGGTCTCCGTTaGCCAGCAGTGTCCCTCCAGCAGCTCAAGTTAATG | + |
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Preference number: 4 (lower is better) Translates to: RSRVLCTKIGLR*PAVSLQQLKLM Trigger: CATTAACTTGAGCTGCTGGAGGGACACTGCTGGCAAACGGAGACCTATTTTTGTACAAAGAACCCTTGACCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000331289.5 |
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| 3UTR CAA 72 bp | CAGGTCATCTTTATTACGCCCCAGGTCAAGGGTTCTTaGTACAAAAATAGGTCTCCGTTTGCCAGCAGTGTC | + |
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Preference number: 4 (lower is better) Translates to: QVIFITPQVKGS*YKNRSPFASSV Trigger: GACACTGCTGGCAAACGGAGACCTATTTTTGTACAAAGAACCCTTGACCTGGGGCGTAATAAAGATGACCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000331289.5 |
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| CDS-3UTR CCA 90 bp | ATCTTTATTACGCCCCAGGTCAAGGGTTCTTTGTACAAAAATAGGTCTCCGTTTCTCGTGTCCAGATCTTaGCCAGCATGGAAAACTCCA | + |
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Preference number: 4 (lower is better) Translates to: IFITPQVKGSLYKNRSPFLVSRS*PAWKTP Trigger: TGGAGTTTTCCATGCTGGCCAAGATCTGGACACGAG...AAACGGAGACCTATTTTTGTACAAAGAACCCTTGACCTGGGGCGTAATAAAGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000331289.5 |
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| CDS GCA 90 bp | CGCAGGGGGCGCGGACCTGGGCAGTGTGCCGCCGTCCATCGCGCCTaGATCCACCCGCCCGCTCCAGGTCCCGGCGCGCCGCAGGAAGGT | + |
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Preference number: 5 (lower is better) Translates to: RRGRGPGQCAAVHRA*IHPPAPGPGAPQEG Trigger: ACCTTCCTGCGGCGCGCCGGGACCTGGAGCGGGCGGGTGGATGCAGGCGCGATGGACGGCGGCACACTGCCCAGGTCCGCGCCCCCTGCG 78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000331289.5 |
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| CDS GCA 90 bp | GCGCTCATTGCGCCGCGCTACGGCCGCTGCGCCGCCTCCGGTCTCTaGGGTGGCCGGTCGCCGCCGCCGGCTGCAGCGCAACAGTTCCGG | + |
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Preference number: 5 (lower is better) Translates to: ALIAPRYGRCAASGL*GGRSPPPAAAQQFR Trigger: CCGGAACTGTTGCGCTGCAGCCGGCGGCGGCGACCGGCCACCGCAGAGACCGGAGGCGGCGCAGCGGCCGTAGCGCGGCGCAATGAGCGC 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000331289.5 |
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| CDS CCA 90 bp | CATTGCGCCGCGCTACGGCCGCTGCGCCGCCTCCGGTCTCTGCGGTaGCCGGTCGCCGCCGCCGGCTGCAGCGCAACAGTTCCGGGGACG | + |
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Preference number: 5 (lower is better) Translates to: HCAALRPLRRLRSLR*PVAAAGCSATVPGT Trigger: CGTCCCCGGAACTGTTGCGCTGCAGCCGGCGGCGGCGACCGGCCACCGCAGAGACCGGAGGCGGCGCAGCGGCCGTAGCGCGGCGCAATG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000331289.5 |
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| CDS GCA 90 bp | CTGCATCCACCCGCCCGCTCCAGGTCCCGGCGCGCCGCAGGAAGGTaGAGGCAGAGGAACCGGAGGCGACGGGGAAAACTGTGGCGCCCC | + |
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Preference number: 5 (lower is better) Translates to: LHPPARSRSRRAAGR*RQRNRRRRGKLWRP Trigger: GGGGCGCCACAGTTTTCCCCGTCGCCTCCGGTTCCTCTGCCTGCACCTTCCTGCGGCGCGCCGGGACCTGGAGCGGGCGGGTGGATGCAG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000331289.5 |
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| CDS GCA 90 bp | GCTGCCGCAGCGCCTGGAAGCCCAAGTTCACCAGCTTCACGCGGTTaGGCTCGCGCTCATTGCGCCGCGCTACGGCCGCTGCGCCGCCTC | + |
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Preference number: 5 (lower is better) Translates to: AAAAPGSPSSPASRG*ARAHCAALRPLRRL Trigger: GAGGCGGCGCAGCGGCCGTAGCGCGGCGCAATGAGCGCGAGCGCAACCGCGTGAAGCTGGTGAACTTGGGCTTCCAGGCGCTGCGGCAGC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000331289.5 |
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| CDS CCA 90 bp | GGGATAGGAGGCCTAGTGGTGGCAGGCCGTACGCGCCAGGGAGCGTaGGACGCTCGTGTCCCGCGCGTGCGGCCGGACTCTCCCAGGTCT | + |
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Preference number: 5 (lower is better) Translates to: GIGGLVVAGRTRQGA*DARVPRVRPDSPRS Trigger: AGACCTGGGAGAGTCCGGCCGCACGCGCGGGACACGAGCGTCCCACGCTCCCTGGCGCGTACGGCCTGCCACCACTAGGCCTCCTATCCC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000331289.5 |
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| CDS-3UTR CAA 90 bp | AGGGGCGGCGTCGGAGGAAGCCGCCAGCCCTTATGGGGCCAGCTCCAAGCCCGTTTGCGCTCGCGCTCATaGCGCCGCGCTACGGCCGCT | + |
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Preference number: 5 (lower is better) Translates to: RGGVGGSRQPLWGQLQARLRSRS*RRATAA Trigger: AGCGGCCGTAGCGCGGCGCAATGAGCGCGAGCGCAA...ACGGGCTTGGAGCTGGCCCCATAAGGGCTGGCGGCTTCCTCCGACGCCGCCCCT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000331289.5 |
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| CDS-3UTR CAA 90 bp | CCCGTTTCCACCGCGGCATTGGTCAGGCTGGGCCGGACGAACGAGGCGGCGTCGACCTTGCTCAGCTTCTaGCTGGCGCCGCCGTGCGGC | + |
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Preference number: 5 (lower is better) Translates to: PVSTAALVRLGRTNEAASTLLSF*LAPPCG Trigger: GCCGCACGGCGGCGCCAGCAAGAAGCTGAGCAAGGT...CGACGCCGCCTCGTTCGTCCGGCCCAGCCTGACCAATGCCGCGGTGGAAACGGG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000331289.5 |
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| CDS-3UTR CAA 90 bp | GCCCTTATGGGGCCAGCTCCAAGCCCGTTTCCACCGCGGCATTGGTCAGGCTGGCCTCCCGCCAGCGCGTaGCGCACGGCGTCGTGCTCG | + |
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Preference number: 5 (lower is better) Translates to: ALMGPAPSPFPPRHWSGWPPASA*RTASCS Trigger: CGAGCACGACGCCGTGCGCAACGCGCTGGCGGGAGG...CCAGCCTGACCAATGCCGCGGTGGAAACGGGCTTGGAGCTGGCCCCATAAGGGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000331289.5 |
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| CDS-3UTR CAA 90 bp | CCGCGGCATTGGTCAGGCTGGGCCGGACGAACGAGGCGGCGTCGGCGGTGCGGGAAAATAGGTCTCCGTTaGCCAGCAGTGTCCCTCCAG | + |
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Preference number: 5 (lower is better) Translates to: PRHWSGWAGRTRRRRRCGKIGLR*PAVSLQ Trigger: CTGGAGGGACACTGCTGGCAAACGGAGACCTATTTT...CCCGCACCGCCGACGCCGCCTCGTTCGTCCGGCCCAGCCTGACCAATGCCGCGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000331289.5 |
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| CDS GCA 90 bp | TCCACCTTGCTCAGCTTCTTGCTGGCGCCGCCGTGCGGCACGTGCTaGCGCAGCGCCTGGAAGCCCAAGTTCACCAGCTTCACGCGGTTG | + |
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Preference number: 5 (lower is better) Translates to: STLLSFLLAPPCGTC*RSAWKPKFTSFTRL Trigger: CAACCGCGTGAAGCTGGTGAACTTGGGCTTCCAGGCGCTGCGGCAGCACGTGCCGCACGGCGGCGCCAGCAAGAAGCTGAGCAAGGTGGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000331289.5 |
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| CDS-3UTR CAA 90 bp | GGAGGGGCGGCGTCGGAGGAAGCCGCCAGCCCTTATGGGGCCAGCTCCAAGCCCGCTCGTGTCCAGATCTaGGCCAGCATGGAAAACTCC | + |
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Preference number: 5 (lower is better) Translates to: GGAASEEAASPYGASSKPARVQI*ASMENS Trigger: GGAGTTTTCCATGCTGGCCAAGATCTGGACACGAGC...GGGCTTGGAGCTGGCCCCATAAGGGCTGGCGGCTTCCTCCGACGCCGCCCCTCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000331289.5 |
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| CDS CCA 90 bp | GCTGAGGCTCATAGGTCGAGGGCGCTCAGTAGCCCCCTAACCAGCTaGAGAAGTCGAGTAGCTCGCGCTCCGCAGGACTCAGCGCGCCTT | + |
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Preference number: 5 (lower is better) Translates to: AEAHRSRALSSPLTS*RSRVARAPQDSARL Trigger: AAGGCGCGCTGAGTCCTGCGGAGCGCGAGCTACTCGACTTCTCCAGCTGGTTAGGGGGCTACTGAGCGCCCTCGACCTATGAGCCTCAGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000331289.5 |
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| CDS-3UTR CAA 90 bp | ATTACGCCCCAGGTCAAGGGTTCTTTGTACAAAAATAGGTCTCCGTTTGCCAGCGTTTCCACCGCGGCATaGGTCAGGCTGGGCCGGACG | + |
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Preference number: 5 (lower is better) Translates to: ITPQVKGSLYKNRSPFASVSTAA*VRLGRT Trigger: CGTCCGGCCCAGCCTGACCAATGCCGCGGTGGAAAC...GCTGGCAAACGGAGACCTATTTTTGTACAAAGAACCCTTGACCTGGGGCGTAAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000331289.5 |
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| CDS-3UTR CAA 90 bp | GGGTCCAGGTCATCTTTATTACGCCCCAGGTCAAGGGTTCTTTGTACAAAAATACGCAGCGTCTCCACCTaGCTCAGCTTCTTGCTGGCG | + |
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Preference number: 5 (lower is better) Translates to: GSRSSLLRPRSRVLCTKIRSVST*LSFLLA Trigger: CGCCAGCAAGAAGCTGAGCAAGGTGGAGACGCTGCG...TATTTTTGTACAAAGAACCCTTGACCTGGGGCGTAATAAAGATGACCTGGACCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000331289.5 |
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| CDS-3UTR CAA 90 bp | ATTACGCCCCAGGTCAAGGGTTCTTTGTACAAAAATAGGTCTCCGTTTGCCAGCAAAGTTCACGCTCCCTaGAAGAGGTGTGCCCCACAC | + |
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Preference number: 5 (lower is better) Translates to: ITPQVKGSLYKNRSPFASKVHAP*KRCAPH Trigger: GTGTGGGGCACACCTCTTCAAGGGAGCGTGAACTTT...GCTGGCAAACGGAGACCTATTTTTGTACAAAGAACCCTTGACCTGGGGCGTAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000331289.5 |
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| CDS-3UTR CAA 90 bp | ATCTTTATTACGCCCCAGGTCAAGGGTTCTTTGTACAAAAATAGGTCTCCGTTTCAGGTCAAGGGTTCTTaGTACAAAAATAGGTCTCCG | + |
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Preference number: 5 (lower is better) Translates to: IFITPQVKGSLYKNRSPFQVKGS*YKNRSP Trigger: CGGAGACCTATTTTTGTACAAAGAACCCTTGACCTG...AAACGGAGACCTATTTTTGTACAAAGAACCCTTGACCTGGGGCGTAATAAAGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000331289.5 |
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| CDS GCA 72 bp | CGCGGACCTGGGCAGTGTGCCGCCGTCCATCGCGCCTaGATCCACCCGCCCGCTCCAGGTCCCGGCGCGCCG | + |
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Preference number: 6 (lower is better) Translates to: RGPGQCAAVHRA*IHPPAPGPGAP Trigger: CGGCGCGCCGGGACCTGGAGCGGGCGGGTGGATGCAGGCGCGATGGACGGCGGCACACTGCCCAGGTCCGCG 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000331289.5 |
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| CDS CAA 72 bp | CGCACGGCCTGCGGCCTCAGCCCTCCCGCCAGCGCGTaGCGCACGGCGTCGTGCTCGGCCAGCAGGCGCTGC | + |
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Preference number: 6 (lower is better) Translates to: RTACGLSPPASA*RTASCSASRRC Trigger: GCAGCGCCTGCTGGCCGAGCACGACGCCGTGCGCAACGCGCTGGCGGGAGGGCTGAGGCCGCAGGCCGTGCG 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000331289.5 |
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| CDS GCA 72 bp | GTTGCGCTCGCGCTCATTGCGCCGCGCTACGGCCGCTaGGCCGCCTCCGGTCTCTGCGGTGGCCGGTCGCCG | + |
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Preference number: 6 (lower is better) Translates to: VALALIAPRYGR*AASGLCGGRSP Trigger: CGGCGACCGGCCACCGCAGAGACCGGAGGCGGCGCAGCGGCCGTAGCGCGGCGCAATGAGCGCGAGCGCAAC 78% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000331289.5 |
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| CDS GCA 72 bp | GCACGGCCTGCGGCCTCAGCCCTCCCGCCAGCGCGTTaGGCACGGCGTCGTGCTCGGCCAGCAGGCGCTGCA | + |
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Preference number: 6 (lower is better) Translates to: ARPAASALPPAR*ARRRARPAGAA Trigger: TGCAGCGCCTGCTGGCCGAGCACGACGCCGTGCGCAACGCGCTGGCGGGAGGGCTGAGGCCGCAGGCCGTGC 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000331289.5 |
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| CDS CCA 72 bp | GCGCTACGGCCGCTGCGCCGCCTCCGGTCTCTGCGGTaGCCGGTCGCCGCCGCCGGCTGCAGCGCAACAGTT | + |
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Preference number: 6 (lower is better) Translates to: ALRPLRRLRSLR*PVAAAGCSATV Trigger: AACTGTTGCGCTGCAGCCGGCGGCGGCGACCGGCCACCGCAGAGACCGGAGGCGGCGCAGCGGCCGTAGCGC 78% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000331289.5 |
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| CDS CCA 72 bp | GGCCTAGTGGTGGCAGGCCGTACGCGCCAGGGAGCGTaGGACGCTCGTGTCCCGCGCGTGCGGCCGGACTCT | + |
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Preference number: 6 (lower is better) Translates to: GLVVAGRTRQGA*DARVPRVRPDS Trigger: AGAGTCCGGCCGCACGCGCGGGACACGAGCGTCCCACGCTCCCTGGCGCGTACGGCCTGCCACCACTAGGCC 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000331289.5 |
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| CDS GCA 72 bp | CCCGCCCGCTCCAGGTCCCGGCGCGCCGCAGGAAGGTaGAGGCAGAGGAACCGGAGGCGACGGGGAAAACTG | + |
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Preference number: 6 (lower is better) Translates to: PARSRSRRAAGR*RQRNRRRRGKL Trigger: CAGTTTTCCCCGTCGCCTCCGGTTCCTCTGCCTGCACCTTCCTGCGGCGCGCCGGGACCTGGAGCGGGCGGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000331289.5 |
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| CDS GCA 72 bp | GCGCCTGGAAGCCCAAGTTCACCAGCTTCACGCGGTTaGGCTCGCGCTCATTGCGCCGCGCTACGGCCGCTG | + |
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Preference number: 6 (lower is better) Translates to: APGSPSSPASRG*ARAHCAALRPL Trigger: CAGCGGCCGTAGCGCGGCGCAATGAGCGCGAGCGCAACCGCGTGAAGCTGGTGAACTTGGGCTTCCAGGCGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000331289.5 |
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| CDS GCA 72 bp | CTCAGCTTCTTGCTGGCGCCGCCGTGCGGCACGTGCTaGCGCAGCGCCTGGAAGCCCAAGTTCACCAGCTTC | + |
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Preference number: 6 (lower is better) Translates to: LSFLLAPPCGTC*RSAWKPKFTSF Trigger: GAAGCTGGTGAACTTGGGCTTCCAGGCGCTGCGGCAGCACGTGCCGCACGGCGGCGCCAGCAAGAAGCTGAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000331289.5 |
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| CDS GCA 72 bp | TTGCTCAGCTTCTTGCTGGCGCCGCCGTGCGGCACGTaGTGCCGCAGCGCCTGGAAGCCCAAGTTCACCAGC | + |
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Preference number: 6 (lower is better) Translates to: LLSFLLAPPCGT*CRSAWKPKFTS Trigger: GCTGGTGAACTTGGGCTTCCAGGCGCTGCGGCAGCACGTGCCGCACGGCGGCGCCAGCAAGAAGCTGAGCAA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000331289.5 |
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| CDS CCA 72 bp | CATAGGTCGAGGGCGCTCAGTAGCCCCCTAACCAGCTaGAGAAGTCGAGTAGCTCGCGCTCCGCAGGACTCA | + |
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Preference number: 6 (lower is better) Translates to: HRSRALSSPLTS*RSRVARAPQDS Trigger: TGAGTCCTGCGGAGCGCGAGCTACTCGACTTCTCCAGCTGGTTAGGGGGCTACTGAGCGCCCTCGACCTATG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000331289.5 |
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