RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ASB8 (Homo sapiens)

Ensembl gene IDs: ENSG00000177981

Ensembl transcript IDs: ENST00000317697.8, ENST00000535055.5, ENST00000535988.3, ENST00000536071.5, ENST00000536549.5, ENST00000536938.1, ENST00000536953.5, ENST00000537754.1, ENST00000539464.5, ENST00000539503.5, ENST00000539528.5, ENST00000539865.5, ENST00000540143.5, ENST00000540212.5, ENST00000540782.1, ENST00000545791.5, ENST00000548228.1, ENST00000629941.1

Found 459 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGAGGAGCTCAAAGCAAGAGTCCTCTTTCTCTGTTCCAAGTCCCCTaGCTAGCAGAGCCACCAGGCGGGAGATGGGTGTCTGGCCTATTA +
Preference number: 1 (lower is better)
Translates to: GGAQSKSPLSLFQVP*LAEPPGGRWVSGLL
Trigger: TAATAGGCCAGACACCCATCTCCCGCCTGGTGGCTCTGCTAGTCAGGGGACTTGGAACAGAGAAAGAGGACTCTTGCTTTGAGCTCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536953.5
3UTR GCA 90 bp AATGAAGACCCATGGGAAAAGGCAGCCCAGCCCATAACTCCTCCCTaGTGGAACACACACCGTAGGTGTAGGAACTGCCTGGGAATCCCA +
Preference number: 1 (lower is better)
Translates to: NEDPWEKAAQPITPP*WNTHRRCRNCLGIP
Trigger: TGGGATTCCCAGGCAGTTCCTACACCTACGGTGTGTGTTCCAGCAGGGAGGAGTTATGGGCTGGGCTGCCTTTTCCCATGGGTCTTCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
3UTR CCA 90 bp GAAGACCCATGGGAAAAGGCAGCCCAGCCCATAACTCCTCCCTGCTaGAACACACACCGTAGGTGTAGGAACTGCCTGGGAATCCCATTA +
Preference number: 1 (lower is better)
Translates to: EDPWEKAAQPITPPC*NTHRRCRNCLGIPL
Trigger: TAATGGGATTCCCAGGCAGTTCCTACACCTACGGTGTGTGTTCCAGCAGGGAGGAGTTATGGGCTGGGCTGCCTTTTCCCATGGGTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
3UTR TCA 90 bp AGGAGAGCCCGCACACACTCAGCATTGTTCTTAAAGGCTGCCCAGTaGAGTGGGGTATCTCTGTTGCCATCCAAAGCATTGGGGTTTGCA +
Preference number: 1 (lower is better)
Translates to: RRARTHSALFLKAAQ*SGVSLLPSKALGFA
Trigger: TGCAAACCCCAATGCTTTGGATGGCAACAGAGATACCCCACTTCACTGGGCAGCCTTTAAGAACAATGCTGAGTGTGTGCGGGCTCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535055.5
ENST00000536953.5
ENST00000539528.5
ENST00000539865.5
3UTR GCA 90 bp CCCATAACTCCTCCCTGCTGGAACACACACCGTAGGTGTAGGAACTaGCTGGGAATCCCATTAGAACACACTGTTTCTCAGGAAGAGAAA +
Preference number: 1 (lower is better)
Translates to: PITPPCWNTHRRCRN*LGIPLEHTVSQEEK
Trigger: TTTCTCTTCCTGAGAAACAGTGTGTTCTAATGGGATTCCCAGGCAGTTCCTACACCTACGGTGTGTGTTCCAGCAGGGAGGAGTTATGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
3UTR CCA 90 bp GGCATGGTGCCATTTTTCCTCAATTCAAAGTGTCCAACAGCTCTGTaGAGGAGCTCAAAGCAAGAGTCCTCTTTCTCTGTTCCAAGTCCC +
Preference number: 1 (lower is better)
Translates to: GMVPFFLNSKCPTAL*RSSKQESSFSVPSP
Trigger: GGGACTTGGAACAGAGAAAGAGGACTCTTGCTTTGAGCTCCTCCACAGAGCTGTTGGACACTTTGAATTGAGGAAAAATGGCACCATGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536953.5
3UTR TCA 90 bp GGTTGTTTGGTTTGGGAAGGGGAGGTGCTATGGAGGTTATTGTTGTaGCATGTTGCTTCGAAATCTATAAACCACACAACAGGAACAACT +
Preference number: 1 (lower is better)
Translates to: GCLVWEGEVLWRLLL*HVASKSINHTTGTT
Trigger: AGTTGTTCCTGTTGTGTGGTTTATAGATTTCGAAGCAACATGTCACAACAATAACCTCCATAGCACCTCCCCTTCCCAAACCAAACAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
3UTR-3UTR CCA 90 bp ACTCCTCCCTGCTGGAACACACACCGTAGGTGTAGGAACTGCCTGGGAATCCCAGAGCTGCCTGCACGATaGTGCAAACATCTTCTCCGG +
Preference number: 2 (lower is better)
Translates to: TPPCWNTHRRCRNCLGIPELPAR*CKHLLR
Trigger: CCGGAGAAGATGTTTGCACCATCGTGCAGGCAGCTC...TGGGATTCCCAGGCAGTTCCTACACCTACGGTGTGTGTTCCAGCAGGGAGGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
3UTR-3UTR CCA 90 bp ACTCCTCCCTGCTGGAACACACACCGTAGGTGTAGGAACTGCCTGGGAATCCCATTGGGTTGTTTGGTTTaGGAAGGGGAGGTGCTATGG +
Preference number: 2 (lower is better)
Translates to: TPPCWNTHRRCRNCLGIPLGCLV*EGEVLW
Trigger: CCATAGCACCTCCCCTTCCCAAACCAAACAACCCAA...TGGGATTCCCAGGCAGTTCCTACACCTACGGTGTGTGTTCCAGCAGGGAGGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
3UTR CAA 90 bp CCCTTGGGCACAACCAACAGAAAGAGGCAAAGACTGCTGTTTCCTTaGATGAGGGGAAAGAGGTCCAGTCCCTTCCAAATGCCCCAGGAC +
Preference number: 2 (lower is better)
Translates to: PLGTTNRKRQRLLFP*MRGKRSSPFQMPQD
Trigger: GTCCTGGGGCATTTGGAAGGGACTGGACCTCTTTCCCCTCATCAAAGGAAACAGCAGTCTTTGCCTCTTTCTGTTGGTTGTGCCCAAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
3UTR-3UTR CCA 90 bp CCCATAACTCCTCCCTGCTGGAACACACACCGTAGGTGTAGGAACTGCCTGGGAGTGAGCCACCATGGCTaGCCTAAAATGCTTTCTAGA +
Preference number: 2 (lower is better)
Translates to: PITPPCWNTHRRCRNCLGVSHHG*PKMLSR
Trigger: TCTAGAAAGCATTTTAGGCCAGCCATGGTGGCTCAC...TCCCAGGCAGTTCCTACACCTACGGTGTGTGTTCCAGCAGGGAGGAGTTATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
3UTR-3UTR TCA 90 bp TGCCCAGTGAAGTGGGGTATCTCTGTTGCCATCCAAAGCATTGGGGTTTGCACCTTAAAGGCTGCCCAGTaGAGTGGGGTATCTCTGTTG +
Preference number: 2 (lower is better)
Translates to: CPVKWGISVAIQSIGVCTLKAAQ*SGVSLL
Trigger: CAACAGAGATACCCCACTTCACTGGGCAGCCTTTAA...GGTGCAAACCCCAATGCTTTGGATGGCAACAGAGATACCCCACTTCACTGGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000535055.5
ENST00000536071.5
ENST00000536953.5
ENST00000539528.5
ENST00000539865.5
3UTR-3UTR TCA 90 bp TCCAGGGCATTCACCTCGGCTCCTTTTTCCAGAAGTAACTCCACACAGTCAGCAGGCTTCAGTGTGCCATaGGTGCAGTTCACATCTGCT +
Preference number: 2 (lower is better)
Translates to: SRAFTSAPFSRSNSTQSAGFSVP*VQFTSA
Trigger: AGCAGATGTGAACTGCACTCATGGCACACTGAAGCC...TGCTGACTGTGTGGAGTTACTTCTGGAAAAAGGAGCCGAGGTGAATGCCCTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000539464.5
ENST00000540143.5
3UTR-3UTR GCA 90 bp GGTAGATGGACCATCACAAAAGGAGCTCTTACATGCTTTTCCCACTCCCATCCCAACCTCACCCAGAGCTaGCTGCACGATGGTGCAAAC +
Preference number: 2 (lower is better)
Translates to: GRWTITKGALTCFSHSHPNLTQS*LHDGAN
Trigger: GTTTGCACCATCGTGCAGGCAGCTCTGGGTGAGGTT...GGGATGGGAGTGGGAAAAGCATGTAAGAGCTCCTTTTGTGATGGTCCATCTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
3UTR-3UTR GCA 90 bp CCCATAACTCCTCCCTGCTGGAACACACACCGTAGGTGTAGGAACTGCCTGGGATTTGGGAAGGGGAGGTaGTATGGAGGTTATTGTTGT +
Preference number: 2 (lower is better)
Translates to: PITPPCWNTHRRCRNCLGFGKGR*YGGYCC
Trigger: ACAACAATAACCTCCATAGCACCTCCCCTTCCCAAA...TCCCAGGCAGTTCCTACACCTACGGTGTGTGTTCCAGCAGGGAGGAGTTATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
3UTR-3UTR GCA 90 bp AAGAGGCAAAGACTGCTGTTTCCTTTGATGAGGGGAAAGAGGTCCAGTCCCTTCTTGTCCAGGCTGGAGTaGAATGGCGCGATCTTGGCT +
Preference number: 2 (lower is better)
Translates to: KRQRLLFPLMRGKRSSPFLSRLE*NGAILA
Trigger: AGCCAAGATCGCGCCATTGCACTCCAGCCTGGACAA...GAAGGGACTGGACCTCTTTCCCCTCATCAAAGGAAACAGCAGTCTTTGCCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
3UTR-3UTR GCA 90 bp TCCAGAAGGATGCTGACACTCTCAAGATTTCCCTTCATGGCAGCCCAGCTGAGCAGCCTCATCTTTCTCTaGTGCATAGTGGAGGGCTGT +
Preference number: 2 (lower is better)
Translates to: SRRMLTLSRFPFMAAQLSSLIFL*CIVEGC
Trigger: ACAGCCCTCCACTATGCAGCAGAGAAAGATGAGGCT...GCTCAGCTGGGCTGCCATGAAGGGAAATCTTGAGAGTGTCAGCATCCTTCTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536953.5
ENST00000539528.5
3UTR-3UTR CCA 90 bp AAGAGGCAAAGACTGCTGTTTCCTTTGATGAGGGGAAAGAGGTCCAGTCCCTTCGAGCTGCCTGCACGATaGTGCAAACATCTTCTCCGG +
Preference number: 2 (lower is better)
Translates to: KRQRLLFPLMRGKRSSPFELPAR*CKHLLR
Trigger: CCGGAGAAGATGTTTGCACCATCGTGCAGGCAGCTC...GAAGGGACTGGACCTCTTTCCCCTCATCAAAGGAAACAGCAGTCTTTGCCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
3UTR-3UTR CCA 90 bp CTCTGTTGCCATCCAAAGCATTGGGGTTTGCACCATACTCCAATAGGACCTCCAGGCTGCCCAGTGAAGTaGGGTATCTCTGTTGCCATC +
Preference number: 2 (lower is better)
Translates to: LCCHPKHWGLHHTPIGPPGCPVK*GISVAI
Trigger: GATGGCAACAGAGATACCCCACTTCACTGGGCAGCC...TGGAGGTCCTATTGGAGTATGGTGCAAACCCCAATGCTTTGGATGGCAACAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535055.5
ENST00000536071.5
ENST00000536953.5
ENST00000539528.5
ENST00000539865.5
3UTR-3UTR CCA 90 bp TCCAAAGCATTGGGGTTTGCACCATACTCCAATAGGACCTCCACACAAGCCTCAGGCTGCCCAGTGAAGTaGGGTATCTCTGTTGCCATC +
Preference number: 2 (lower is better)
Translates to: SKALGFAPYSNRTSTQASGCPVK*GISVAI
Trigger: GATGGCAACAGAGATACCCCACTTCACTGGGCAGCC...TGAGGCTTGTGTGGAGGTCCTATTGGAGTATGGTGCAAACCCCAATGCTTTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535055.5
ENST00000536071.5
ENST00000536953.5
ENST00000539528.5
ENST00000539865.5
3UTR-3UTR GCA 90 bp TTGGGCACAACCAACAGAAAGAGGCAAAGACTGCTGTTTCCTTTGATGAGGGGATTGTCCAGGCTGGAGTaGAATGGCGCGATCTTGGCT +
Preference number: 2 (lower is better)
Translates to: LGTTNRKRQRLLFPLMRGLSRLE*NGAILA
Trigger: AGCCAAGATCGCGCCATTGCACTCCAGCCTGGACAA...TCCCCTCATCAAAGGAAACAGCAGTCTTTGCCTCTTTCTGTTGGTTGTGCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
3UTR-3UTR GCA 90 bp TTTCTCTGCTGCATAGTGGAGGGCTGTTCGGTTATACCCATCCAGGGCATTCACAGCCTCATCTTTCTCTaGTGCATAGTGGAGGGCTGT +
Preference number: 2 (lower is better)
Translates to: FLCCIVEGCSVIPIQGIHSLIFL*CIVEGC
Trigger: ACAGCCCTCCACTATGCAGCAGAGAAAGATGAGGCT...GTGAATGCCCTGGATGGGTATAACCGAACAGCCCTCCACTATGCAGCAGAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000535055.5
ENST00000536071.5
ENST00000536953.5
ENST00000539464.5
ENST00000539528.5
ENST00000539865.5
ENST00000540143.5
3UTR-3UTR GCA 90 bp TTGACAGAGGCCCCGCTCTCTAGGAGAGCCCGCACACACTCAGCATTGTTCTTAATTGTTCTTAAAGGCTaGCCAGTGAAGTGGGGTATC +
Preference number: 2 (lower is better)
Translates to: LTEAPLSRRARTHSALFLIVLKG*PVKWGI
Trigger: GATACCCCACTTCACTGGGCAGCCTTTAAGAACAAT...TAAGAACAATGCTGAGTGTGTGCGGGCTCTCCTAGAGAGCGGGGCCTCTGTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000535055.5
ENST00000536953.5
ENST00000539528.5
3UTR-3UTR CCA 90 bp GAGGGCTGTTCGGTTATACCCATCCAGGGCATTCACCTCGGCTCCTTTTTCCAGTTCACATCTGCTCCCTaGACATCACTGAAGACAATC +
Preference number: 2 (lower is better)
Translates to: EGCSVIPIQGIHLGSFFQFTSAP*TSLKTI
Trigger: GATTGTCTTCAGTGATGTCCAGGGAGCAGATGTGAA...CTGGAAAAAGGAGCCGAGGTGAATGCCCTGGATGGGTATAACCGAACAGCCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000539464.5
ENST00000540143.5
3UTR CAA 90 bp CCCAGTGAAGTGGGGTATCTCTGTTGCCATCCAAAGCATTGGGGTTaGCACCATACTCCAATAGGACCTCCACACAAGCCTCATCTTTCT +
Preference number: 2 (lower is better)
Translates to: PSEVGYLCCHPKHWG*HHTPIGPPHKPHLS
Trigger: AGAAAGATGAGGCTTGTGTGGAGGTCCTATTGGAGTATGGTGCAAACCCCAATGCTTTGGATGGCAACAGAGATACCCCACTTCACTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535055.5
ENST00000536071.5
ENST00000536953.5
ENST00000539528.5
ENST00000539865.5
3UTR-3UTR TCA 90 bp CCCATAACTCCTCCCTGCTGGAACACACACCGTAGGTGTAGGAACTGCCTGGGATGGAGGTTATTGTTGTaGCATGTTGCTTCGAAATCT +
Preference number: 2 (lower is better)
Translates to: PITPPCWNTHRRCRNCLGWRLLL*HVASKS
Trigger: AGATTTCGAAGCAACATGTCACAACAATAACCTCCA...TCCCAGGCAGTTCCTACACCTACGGTGTGTGTTCCAGCAGGGAGGAGTTATGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
3UTR-3UTR GCA 90 bp GGTTTGCACCATACTCCAATAGGACCTCCACACAAGCCTCATCTTTCTCTGCTGCTCATCTTTCTCTGCTaGATAGTGGAGGGCTGTTCG +
Preference number: 2 (lower is better)
Translates to: GLHHTPIGPPHKPHLSLLLIFLC*IVEGCS
Trigger: CGAACAGCCCTCCACTATGCAGCAGAGAAAGATGAG...CAGCAGAGAAAGATGAGGCTTGTGTGGAGGTCCTATTGGAGTATGGTGCAAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000535055.5
ENST00000536071.5
ENST00000536953.5
ENST00000539528.5
ENST00000539865.5
ENST00000540143.5
3UTR-3UTR GCA 90 bp TGCCATCCAAAGCATTGGGGTTTGCACCATACTCCAATAGGACCTCCACACAAGCTCATCTTTCTCTGCTaGATAGTGGAGGGCTGTTCG +
Preference number: 2 (lower is better)
Translates to: CHPKHWGLHHTPIGPPHKLIFLC*IVEGCS
Trigger: CGAACAGCCCTCCACTATGCAGCAGAGAAAGATGAG...CTTGTGTGGAGGTCCTATTGGAGTATGGTGCAAACCCCAATGCTTTGGATGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535055.5
ENST00000536071.5
ENST00000536953.5
ENST00000539528.5
ENST00000539865.5
ENST00000540143.5
3UTR-3UTR GCA 90 bp GGGGTATCTCTGTTGCCATCCAAAGCATTGGGGTTTGCACCATACTCCAATAGGCTCATCTTTCTCTGCTaGATAGTGGAGGGCTGTTCG +
Preference number: 2 (lower is better)
Translates to: GVSLLPSKALGFAPYSNRLIFLC*IVEGCS
Trigger: CGAACAGCCCTCCACTATGCAGCAGAGAAAGATGAG...CCTATTGGAGTATGGTGCAAACCCCAATGCTTTGGATGGCAACAGAGATACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000535055.5
ENST00000536071.5
ENST00000536953.5
ENST00000539528.5
ENST00000539865.5
ENST00000540143.5
3UTR-3UTR GCA 90 bp CTCTGTTGCCATCCAAAGCATTGGGGTTTGCACCATACTCCAATAGGACCTCCACTCATCTTTCTCTGCTaGATAGTGGAGGGCTGTTCG +
Preference number: 2 (lower is better)
Translates to: LCCHPKHWGLHHTPIGPPLIFLC*IVEGCS
Trigger: CGAACAGCCCTCCACTATGCAGCAGAGAAAGATGAG...TGGAGGTCCTATTGGAGTATGGTGCAAACCCCAATGCTTTGGATGGCAACAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535055.5
ENST00000536071.5
ENST00000536953.5
ENST00000539528.5
ENST00000539865.5
ENST00000540143.5
3UTR-3UTR GCA 90 bp CCAAAGCATTGGGGTTTGCACCATACTCCAATAGGACCTCCACACAAGCCTCATCTCATCTTTCTCTGCTaGATAGTGGAGGGCTGTTCG +
Preference number: 2 (lower is better)
Translates to: PKHWGLHHTPIGPPHKPHLIFLC*IVEGCS
Trigger: CGAACAGCCCTCCACTATGCAGCAGAGAAAGATGAG...ATGAGGCTTGTGTGGAGGTCCTATTGGAGTATGGTGCAAACCCCAATGCTTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535055.5
ENST00000536071.5
ENST00000536953.5
ENST00000539528.5
ENST00000539865.5
ENST00000540143.5
3UTR-3UTR GCA 90 bp GTGAAGTGGGGTATCTCTGTTGCCATCCAAAGCATTGGGGTTTGCACCATACTCAGCCTCATCTTTCTCTaGTGCATAGTGGAGGGCTGT +
Preference number: 2 (lower is better)
Translates to: VKWGISVAIQSIGVCTILSLIFL*CIVEGC
Trigger: ACAGCCCTCCACTATGCAGCAGAGAAAGATGAGGCT...GAGTATGGTGCAAACCCCAATGCTTTGGATGGCAACAGAGATACCCCACTTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000535055.5
ENST00000536071.5
ENST00000536953.5
ENST00000539528.5
ENST00000539865.5
ENST00000540143.5
3UTR-3UTR GCA 90 bp TCCAAAGCATTGGGGTTTGCACCATACTCCAATAGGACCTCCACACAAGCCTCAAGCCTCATCTTTCTCTaGTGCATAGTGGAGGGCTGT +
Preference number: 2 (lower is better)
Translates to: SKALGFAPYSNRTSTQASSLIFL*CIVEGC
Trigger: ACAGCCCTCCACTATGCAGCAGAGAAAGATGAGGCT...TGAGGCTTGTGTGGAGGTCCTATTGGAGTATGGTGCAAACCCCAATGCTTTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535055.5
ENST00000536071.5
ENST00000536953.5
ENST00000539528.5
ENST00000539865.5
ENST00000540143.5
3UTR-3UTR GCA 90 bp GACACTCTCAAGATTTCCCTTCATGGCAGCCCAGCTGAGCGGTGTATCATTGTTGTGGGGTATCTCTGTTaGCATCCAAAGCATTGGGGT +
Preference number: 2 (lower is better)
Translates to: DTLKISLHGSPAERCIIVVGYLC*HPKHWG
Trigger: ACCCCAATGCTTTGGATGGCAACAGAGATACCCCAC...AACAATGATACACCGCTCAGCTGGGCTGCCATGAAGGGAAATCTTGAGAGTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536953.5
ENST00000539528.5
3UTR-3UTR CCA 90 bp AGTGAACTTTCCATTGGGAATGAAGACCCATGGGAAAAGGCAGCCCAGCCCATAAAATGCCCCAGGACATaGCACAGTAGGGATGTCATC +
Preference number: 2 (lower is better)
Translates to: SELSIGNEDPWEKAAQPIKCPRT*HSRDVI
Trigger: GATGACATCCCTACTGTGCCATGTCCTGGGGCATTT...TATGGGCTGGGCTGCCTTTTCCCATGGGTCTTCATTCCCAATGGAAAGTTCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
3UTR-3UTR CCA 90 bp CAGAGTATCAGCACCATACAATGGGGGCAAGCAGGGTGGGGACAGAAAGGTAAAGTTAGAAGTTCAGACTaGAGGAGGGAAGAGATGGAG +
Preference number: 2 (lower is better)
Translates to: QSISTIQWGQAGWGQKGKVRSSD*RREEME
Trigger: CTCCATCTCTTCCCTCCTCCAGTCTGAACTTCTAAC...TTTACCTTTCTGTCCCCACCCTGCTTGCCCCCATTGTATGGTGCTGATACTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000535988.3
ENST00000540782.1
3UTR-3UTR CCA 90 bp AAGAAAGAAAGGCAGAGTATCAGCACCATACAATGGGGGCAAGCAGGGTGGGGAGTTAGAAGTTCAGACTaGAGGAGGGAAGAGATGGAG +
Preference number: 2 (lower is better)
Translates to: KKERQSISTIQWGQAGWGVRSSD*RREEME
Trigger: CTCCATCTCTTCCCTCCTCCAGTCTGAACTTCTAAC...TCCCCACCCTGCTTGCCCCCATTGTATGGTGCTGATACTCTGCCTTTCTTTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000535988.3
ENST00000540782.1
3UTR CAA 90 bp AGTAGACAGACTACTGAGAGGAAGACAGGACAGCAGCAAAGAAGCTaGCATGGTTACCCACTACCTTTGCTATGCAGTGCTCTGAACAGG +
Preference number: 2 (lower is better)
Translates to: SRQTTERKTGQQQRS*HGYPLPLLCSALNR
Trigger: CCTGTTCAGAGCACTGCATAGCAAAGGTAGTGGGTAACCATGCAAGCTTCTTTGCTGCTGTCCTGTCTTCCTCTCAGTAGTCTGTCTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539528.5
3UTR-3UTR TCA 90 bp AAAGGCAGAGTATCAGCACCATACAATGGGGGCAAGCAGGGTGGGGACAGAAAGATGCCAACATTACCTTaGGTTAGAAGTTCAGACTGG +
Preference number: 2 (lower is better)
Translates to: KGRVSAPYNGGKQGGDRKMPTLP*VRSSDW
Trigger: CCAGTCTGAACTTCTAACTCAAGGTAATGTTGGCAT...CTTTCTGTCCCCACCCTGCTTGCCCCCATTGTATGGTGCTGATACTCTGCCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000535988.3
ENST00000540782.1
3UTR-3UTR GCA 90 bp GGATTCTTCTGGACCGTTAACCACGTCCCCAAAGGAAAACCACACACACATTATTCACCCAGAGCTGCCTaGACGATGGTGCAAACATCT +
Preference number: 2 (lower is better)
Translates to: GFFWTVNHVPKGKPHTHYSPRAA*TMVQTS
Trigger: AGATGTTTGCACCATCGTGCAGGCAGCTCTGGGTGA...ATAATGTGTGTGTGGTTTTCCTTTGGGGACGTGGTTAACGGTCCAGAAGAATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
3UTR-3UTR GCA 90 bp TTTCCCACTCCCATCCCAAGTCCACCCTCCCACCAATTGTATTGTATAAATCAAAACCTCACCCAGAGCTaGCTGCACGATGGTGCAAAC +
Preference number: 2 (lower is better)
Translates to: FPTPIPSPPSHQLYCINQNLTQS*LHDGAN
Trigger: GTTTGCACCATCGTGCAGGCAGCTCTGGGTGAGGTT...TTGATTTATACAATACAATTGGTGGGAGGGTGGACTTGGGATGGGAGTGGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
3UTR-3UTR GCA 90 bp GGTAGATGGACCATCACAAAAGGAGCTCTTACATGCTTTTCCCACTCCCATCCCCGTAGGTGTAGGAACTaGCTGGGAATCCCATTAGAA +
Preference number: 2 (lower is better)
Translates to: GRWTITKGALTCFSHSHPRRCRN*LGIPLE
Trigger: TTCTAATGGGATTCCCAGGCAGTTCCTACACCTACG...GGGATGGGAGTGGGAAAAGCATGTAAGAGCTCCTTTTGTGATGGTCCATCTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
3UTR-3UTR GCA 90 bp GGGGTATCTCTGTTGCCATCCAAAGCATTGGGGTTTGCACCATACTCCAATAGGCATTCACCTTTGCTATaGAGTGCTCTGAACAGGAGG +
Preference number: 2 (lower is better)
Translates to: GVSLLPSKALGFAPYSNRHSPLL*SALNRR
Trigger: CCTCCTGTTCAGAGCACTGCATAGCAAAGGTGAATG...CCTATTGGAGTATGGTGCAAACCCCAATGCTTTGGATGGCAACAGAGATACCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000535055.5
ENST00000536071.5
ENST00000536953.5
3UTR-3UTR GCA 90 bp ATCTTTCTCTGCTGCATAGTGGAGGGCTGTTCGGTTATACCCATCCAGGGCATTCATTCACCTTTGCTATaGAGTGCTCTGAACAGGAGG +
Preference number: 2 (lower is better)
Translates to: IFLCCIVEGCSVIPIQGIHSPLL*SALNRR
Trigger: CCTCCTGTTCAGAGCACTGCATAGCAAAGGTGAATG...AATGCCCTGGATGGGTATAACCGAACAGCCCTCCACTATGCAGCAGAGAAAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535055.5
ENST00000536071.5
ENST00000536953.5
3UTR-3UTR GCA 90 bp CTTAAAGGCTGCCCAGTGAAGTGGGGTATCTCTGTTGCCATCCAAAGCATTGGGATTGTTCTTAAAGGCTaGCCAGTGAAGTGGGGTATC +
Preference number: 2 (lower is better)
Translates to: LKGCPVKWGISVAIQSIGIVLKG*PVKWGI
Trigger: GATACCCCACTTCACTGGGCAGCCTTTAAGAACAAT...CCCAATGCTTTGGATGGCAACAGAGATACCCCACTTCACTGGGCAGCCTTTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535055.5
ENST00000536071.5
ENST00000536953.5
ENST00000539528.5
ENST00000539865.5
3UTR-3UTR GCA 90 bp TTGCCATCCAAAGCATTGGGGTTTGCACCATACTCCAATAGGACCTCCACACAATCAGTGTGCCATGAGTaGAGTTCACATCTGCTCCCT +
Preference number: 2 (lower is better)
Translates to: LPSKALGFAPYSNRTSTQSVCHE*SSHLLP
Trigger: AGGGAGCAGATGTGAACTGCACTCATGGCACACTGA...TTGTGTGGAGGTCCTATTGGAGTATGGTGCAAACCCCAATGCTTTGGATGGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540143.5
3UTR-3UTR GCA 90 bp CACCATACTCCAATAGGACCTCCACACAAGCCTCATCTTTCTCTGCTGCATAGTCCACTACCTTTGCTATaGAGTGCTCTGAACAGGAGG +
Preference number: 2 (lower is better)
Translates to: HHTPIGPPHKPHLSLLHSPLPLL*SALNRR
Trigger: CCTCCTGTTCAGAGCACTGCATAGCAAAGGTAGTGG...ACTATGCAGCAGAGAAAGATGAGGCTTGTGTGGAGGTCCTATTGGAGTATGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539528.5
3UTR-3UTR CCA 90 bp GGTAGATGGACCATCACAAAAGGAGCTCTTACATGCTTTTCCCACTCCCATCCCTTTTGTTGGGTTGTTTaGTTTGGGAAGGGGAGGTGC +
Preference number: 2 (lower is better)
Translates to: GRWTITKGALTCFSHSHPFCWVV*FGKGRC
Trigger: GCACCTCCCCTTCCCAAACCAAACAACCCAACAAAA...GGGATGGGAGTGGGAAAAGCATGTAAGAGCTCCTTTTGTGATGGTCCATCTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
3UTR-3UTR CCA 90 bp AGTGAACTTTCCATTGGGAATGAAGACCCATGGGAAAAGGCAGCCCAGCCCATAAGCTACTGTAGCCCTTaGGCACAACCAACAGAAAGA +
Preference number: 2 (lower is better)
Translates to: SELSIGNEDPWEKAAQPISYCSP*AQPTER
Trigger: TCTTTCTGTTGGTTGTGCCCAAGGGCTACAGTAGCT...TATGGGCTGGGCTGCCTTTTCCCATGGGTCTTCATTCCCAATGGAAAGTTCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
3UTR-3UTR TCA 90 bp AAGAAAGAAAGGCAGAGTATCAGCACCATACAATGGGGGCAAGCAGGGTGGGGAATGCCAACATTACCTTaGGTTAGAAGTTCAGACTGG +
Preference number: 2 (lower is better)
Translates to: KKERQSISTIQWGQAGWGMPTLP*VRSSDW
Trigger: CCAGTCTGAACTTCTAACTCAAGGTAATGTTGGCAT...TCCCCACCCTGCTTGCCCCCATTGTATGGTGCTGATACTCTGCCTTTCTTTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000535988.3
ENST00000540782.1
3UTR-3UTR GCA 90 bp TTCAGAGCTACTGTAGCCCTTGGGCACAACCAACAGAAAGAGGCAAAGACTGCTTTTGGGAAGGGGAGGTaGTATGGAGGTTATTGTTGT +
Preference number: 2 (lower is better)
Translates to: FRATVALGHNQQKEAKTAFGKGR*YGGYCC
Trigger: ACAACAATAACCTCCATAGCACCTCCCCTTCCCAAA...AGCAGTCTTTGCCTCTTTCTGTTGGTTGTGCCCAAGGGCTACAGTAGCTCTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
3UTR-3UTR GCA 90 bp AAATGCCCCAGGACATGGCACAGTAGGGATGTCATCCAGCCCAGTTCTGGATCTATGGCTGGCCTAAAATaGTTTCTAGAAGGGATTCTT +
Preference number: 2 (lower is better)
Translates to: KCPRTWHSRDVIQPSSGSMAGLK*FLEGIL
Trigger: AAGAATCCCTTCTAGAAAGCATTTTAGGCCAGCCAT...AGATCCAGAACTGGGCTGGATGACATCCCTACTGTGCCATGTCCTGGGGCATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
3UTR-3UTR GCA 90 bp CTCTGTTGCCATCCAAAGCATTGGGGTTTGCACCATACTCCAATAGGACCTCCAATTGTTCTTAAAGGCTaGCCAGTGAAGTGGGGTATC +
Preference number: 2 (lower is better)
Translates to: LCCHPKHWGLHHTPIGPPIVLKG*PVKWGI
Trigger: GATACCCCACTTCACTGGGCAGCCTTTAAGAACAAT...TGGAGGTCCTATTGGAGTATGGTGCAAACCCCAATGCTTTGGATGGCAACAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535055.5
ENST00000536071.5
ENST00000536953.5
ENST00000539528.5
ENST00000539865.5
3UTR-3UTR GCA 90 bp TTGCACCATACTCCAATAGGACCTCCACACAAGCCTCATCTTTCTCTGCTGCATAGTGCAGTTCACATCTaGTCCCTGGACATCACTGAA +
Preference number: 2 (lower is better)
Translates to: LHHTPIGPPHKPHLSLLHSAVHI*SLDITE
Trigger: TTCAGTGATGTCCAGGGAGCAGATGTGAACTGCACT...ATGCAGCAGAGAAAGATGAGGCTTGTGTGGAGGTCCTATTGGAGTATGGTGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540143.5
3UTR-3UTR GCA 90 bp GTGAAGTGGGGTATCTCTGTTGCCATCCAAAGCATTGGGGTTTGCACCATACTCAGCAGCAAAGAAGCTTaGATGGTTACCCACTACCTT +
Preference number: 2 (lower is better)
Translates to: VKWGISVAIQSIGVCTILSSKEA*MVTHYL
Trigger: AAGGTAGTGGGTAACCATGCAAGCTTCTTTGCTGCT...GAGTATGGTGCAAACCCCAATGCTTTGGATGGCAACAGAGATACCCCACTTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539528.5
3UTR-3UTR CCA 90 bp GGATTCTTCTGGACCGTTAACCACGTCCCCAAAGGAAAACCACACACACATTATTTGGGTTGTTTGGTTTaGGAAGGGGAGGTGCTATGG +
Preference number: 2 (lower is better)
Translates to: GFFWTVNHVPKGKPHTHYLGCLV*EGEVLW
Trigger: CCATAGCACCTCCCCTTCCCAAACCAAACAACCCAA...ATAATGTGTGTGTGGTTTTCCTTTGGGGACGTGGTTAACGGTCCAGAAGAATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
3UTR-3UTR CCA 90 bp GCATTGGGGTTTGCACCATACTCCAATAGGACCTCCACACAAGCCTCATCTTTCTTCACATCTGCTCCCTaGACATCACTGAAGACAATC +
Preference number: 2 (lower is better)
Translates to: ALGFAPYSNRTSTQASSFFTSAP*TSLKTI
Trigger: GATTGTCTTCAGTGATGTCCAGGGAGCAGATGTGAA...GAAAGATGAGGCTTGTGTGGAGGTCCTATTGGAGTATGGTGCAAACCCCAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540143.5
3UTR-3UTR CCA 90 bp TGTTGCCATCCAAAGCATTGGGGTTTGCACCATACTCCAATAGGACCTCCACACGCAAAGAAGCTTGCATaGTTACCCACTACCTTTGCT +
Preference number: 2 (lower is better)
Translates to: CCHPKHWGLHHTPIGPPHAKKLA*LPTTFA
Trigger: AGCAAAGGTAGTGGGTAACCATGCAAGCTTCTTTGC...GTGTGGAGGTCCTATTGGAGTATGGTGCAAACCCCAATGCTTTGGATGGCAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539528.5
3UTR-3UTR GCA 90 bp CTTTTTCCAGAAGTAACTCCACACAGTCAGCATCTGACACCATACAGGCACAGTAGTGCAGTTCACATCTaGTCCCTGGACATCACTGAA +
Preference number: 2 (lower is better)
Translates to: LFPEVTPHSQHLTPYRHSSAVHI*SLDITE
Trigger: TTCAGTGATGTCCAGGGAGCAGATGTGAACTGCACT...ACTGTGCCTGTATGGTGTCAGATGCTGACTGTGTGGAGTTACTTCTGGAAAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000539464.5
ENST00000540143.5
3UTR-3UTR GCA 90 bp TTCAGAGCTACTGTAGCCCTTGGGCACAACCAACAGAAAGAGGCAAAGACTGCTATGGCTGGCCTAAAATaGTTTCTAGAAGGGATTCTT +
Preference number: 2 (lower is better)
Translates to: FRATVALGHNQQKEAKTAMAGLK*FLEGIL
Trigger: AAGAATCCCTTCTAGAAAGCATTTTAGGCCAGCCAT...AGCAGTCTTTGCCTCTTTCTGTTGGTTGTGCCCAAGGGCTACAGTAGCTCTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
3UTR-3UTR GCA 90 bp CCATTTTTCCTCAATTCAAAGTGTCCAACAGCTCTGTGGAGGAGCTCAAAGCAACATTCACCTTTGCTATaGAGTGCTCTGAACAGGAGG +
Preference number: 2 (lower is better)
Translates to: PFFLNSKCPTALWRSSKQHSPLL*SALNRR
Trigger: CCTCCTGTTCAGAGCACTGCATAGCAAAGGTGAATG...TTGCTTTGAGCTCCTCCACAGAGCTGTTGGACACTTTGAATTGAGGAAAAATGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536953.5
3UTR-3UTR GCA 90 bp ACAGAAGAAGACATCTGTTTTCCAATTAGCTGTGTCAGTAGATTCCATTCATTGCCAGTCCCTTCCAAATaGCCCAGGACATGGCACAGT +
Preference number: 2 (lower is better)
Translates to: TEEDICFPISCVSRFHSLPVPSK*PRTWHS
Trigger: ACTGTGCCATGTCCTGGGGCATTTGGAAGGGACTGG...CAATGAATGGAATCTACTGACACAGCTAATTGGAAAACAGATGTCTTCTTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
3UTR-3UTR GCA 90 bp ACAGAAGAAGACATCTGTTTTCCAATTAGCTGTGTCAGTAGATTCCATTCATTGTCACCCAGAGCTGCCTaGACGATGGTGCAAACATCT +
Preference number: 2 (lower is better)
Translates to: TEEDICFPISCVSRFHSLSPRAA*TMVQTS
Trigger: AGATGTTTGCACCATCGTGCAGGCAGCTCTGGGTGA...CAATGAATGGAATCTACTGACACAGCTAATTGGAAAACAGATGTCTTCTTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
3UTR-3UTR GCA 90 bp ACAGAAGAAGACATCTGTTTTCCAATTAGCTGTGTCAGTAGATTCCATTCATTGTGTGACAAGGAGTACTaGAGGGACAACCTCACCCAG +
Preference number: 2 (lower is better)
Translates to: TEEDICFPISCVSRFHSLCDKEY*RDNLTQ
Trigger: CTGGGTGAGGTTGTCCCTGCAGTACTCCTTGTCACA...CAATGAATGGAATCTACTGACACAGCTAATTGGAAAACAGATGTCTTCTTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
3UTR-3UTR GCA 90 bp TTTCCCACTCCCATCCCAAGTCCACCCTCCCACCAATTGTATTGTATAAATCAATTTTTGAGACAGTTTTaGTCTTGTTGTCCAGGCTGG +
Preference number: 2 (lower is better)
Translates to: FPTPIPSPPSHQLYCINQFLRQF*SCCPGW
Trigger: CCAGCCTGGACAACAAGAGCAAAACTGTCTCAAAAA...TTGATTTATACAATACAATTGGTGGGAGGGTGGACTTGGGATGGGAGTGGGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
3UTR-3UTR GCA 90 bp GGTAGATGGACCATCACAAAAGGAGCTCTTACATGCTTTTCCCACTCCCATCCCAGGAAGAGAAAAAGCTaGATTACAAGAAAAGTTCTC +
Preference number: 2 (lower is better)
Translates to: GRWTITKGALTCFSHSHPRKRKS*ITRKVL
Trigger: GAGAACTTTTCTTGTAATGCAGCTTTTTCTCTTCCT...GGGATGGGAGTGGGAAAAGCATGTAAGAGCTCCTTTTGTGATGGTCCATCTACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
3UTR-3UTR TCA 90 bp TTTCCCACTCCCATCCCAAGTCCACCCTCCCACCAATTGTATTGTATAAATCAATGGATCTGCACCATTTaGGGTTATAGTATCTTCATC +
Preference number: 2 (lower is better)
Translates to: FPTPIPSPPSHQLYCINQWICTI*GYSIFI
Trigger: GATGAAGATACTATAACCTCAAATGGTGCAGATCCA...TTGATTTATACAATACAATTGGTGGGAGGGTGGACTTGGGATGGGAGTGGGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
3UTR-3UTR GCA 90 bp ACAGAAGAAGACATCTGTTTTCCAATTAGCTGTGTCAGTAGATTCCATTCATTGCGTAGGTGTAGGAACTaGCTGGGAATCCCATTAGAA +
Preference number: 2 (lower is better)
Translates to: TEEDICFPISCVSRFHSLRRCRN*LGIPLE
Trigger: TTCTAATGGGATTCCCAGGCAGTTCCTACACCTACG...CAATGAATGGAATCTACTGACACAGCTAATTGGAAAACAGATGTCTTCTTCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
3UTR-3UTR CCA 90 bp ACAGAAGAAGACATCTGTTTTCCAATTAGCTGTGTCAGTAGATTCCATTCATTGGTGAGCCACCATGGCTaGCCTAAAATGCTTTCTAGA +
Preference number: 2 (lower is better)
Translates to: TEEDICFPISCVSRFHSLVSHHG*PKMLSR
Trigger: TCTAGAAAGCATTTTAGGCCAGCCATGGTGGCTCAC...CAATGAATGGAATCTACTGACACAGCTAATTGGAAAACAGATGTCTTCTTCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
3UTR-3UTR GCA 90 bp ACAGAAGAAGACATCTGTTTTCCAATTAGCTGTGTCAGTAGATTCCATTCATTGTTTTTGAGACAGTTTTaGTCTTGTTGTCCAGGCTGG +
Preference number: 2 (lower is better)
Translates to: TEEDICFPISCVSRFHSLFLRQF*SCCPGW
Trigger: CCAGCCTGGACAACAAGAGCAAAACTGTCTCAAAAA...CAATGAATGGAATCTACTGACACAGCTAATTGGAAAACAGATGTCTTCTTCTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
3UTR-3UTR TCA 90 bp ACAGAAGAAGACATCTGTTTTCCAATTAGCTGTGTCAGTAGATTCCATTCATTGTGGAGGTTATTGTTGTaGCATGTTGCTTCGAAATCT +
Preference number: 2 (lower is better)
Translates to: TEEDICFPISCVSRFHSLWRLLL*HVASKS
Trigger: AGATTTCGAAGCAACATGTCACAACAATAACCTCCA...CAATGAATGGAATCTACTGACACAGCTAATTGGAAAACAGATGTCTTCTTCTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
3UTR TCA 72 bp ACCATACAGGCACAGTGCAAGGGCTTCAGTGTGCCATaGGTGCAGTTCACATCTGCTCCCTGGACATCACTG +
Preference number: 3 (lower is better)
Translates to: TIQAQCKGFSVP*VQFTSAPWTSL
Trigger: CAGTGATGTCCAGGGAGCAGATGTGAACTGCACTCATGGCACACTGAAGCCCTTGCACTGTGCCTGTATGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539464.5
ENST00000540143.5
3UTR-3UTR CAA 90 bp CAGAAGGATGCTGACACTCTCAAGATTTCCCTTCATGGCAGCCCAGCTGAGCGGTTGCCATCCAAAGCATaGGGGTTTGCACCATACTCC +
Preference number: 3 (lower is better)
Translates to: QKDADTLKISLHGSPAERLPSKA*GFAPYS
Trigger: GGAGTATGGTGCAAACCCCAATGCTTTGGATGGCAA...CCGCTCAGCTGGGCTGCCATGAAGGGAAATCTTGAGAGTGTCAGCATCCTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536953.5
ENST00000539528.5
3UTR-3UTR CAA 90 bp TTGACAGAGGCCCCGCTCTCTAGGAGAGCCCGCACACACTCAGCATTGTTCTTAGGTTACCCACTACCTTaGCTATGCAGTGCTCTGAAC +
Preference number: 3 (lower is better)
Translates to: LTEAPLSRRARTHSALFLGYPLP*LCSALN
Trigger: GTTCAGAGCACTGCATAGCAAAGGTAGTGGGTAACC...TAAGAACAATGCTGAGTGTGTGCGGGCTCTCCTAGAGAGCGGGGCCTCTGTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539528.5
3UTR GCA 72 bp CCTCCCTGCTGGAACACACACCGTAGGTGTAGGAACTaGCTGGGAATCCCATTAGAACACACTGTTTCTCAG +
Preference number: 3 (lower is better)
Translates to: PPCWNTHRRCRN*LGIPLEHTVSQ
Trigger: CTGAGAAACAGTGTGTTCTAATGGGATTCCCAGGCAGTTCCTACACCTACGGTGTGTGTTCCAGCAGGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
3UTR GCA 72 bp GAGAGCCCGCACACACTCAGCATTGTTCTTAAAGGCTaGCCAGTGAAGTGGGGTATCTCTGTTGCCATCCAA +
Preference number: 3 (lower is better)
Translates to: ESPHTLSIVLKG*PVKWGISVAIQ
Trigger: TTGGATGGCAACAGAGATACCCCACTTCACTGGGCAGCCTTTAAGAACAATGCTGAGTGTGTGCGGGCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535055.5
ENST00000536953.5
ENST00000539528.5
ENST00000539865.5
3UTR-3UTR CAA 90 bp CCACACAAGCCTCATCTTTCTCTGCTGCATAGTGGAGGGCTGTTCGGTTATACCCCAGGGCATTCACCTTaGCTATGCAGTGCTCTGAAC +
Preference number: 3 (lower is better)
Translates to: PHKPHLSLLHSGGLFGYTPGHSP*LCSALN
Trigger: GTTCAGAGCACTGCATAGCAAAGGTGAATGCCCTGG...GGTATAACCGAACAGCCCTCCACTATGCAGCAGAGAAAGATGAGGCTTGTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535055.5
ENST00000536071.5
ENST00000536953.5
3UTR-3UTR CAA 90 bp CTTAAAGGCTGCCCAGTGAAGTGGGGTATCTCTGTTGCCATCCAAAGCATTGGGAGTGGGGTATCTCTGTaGCCATCCAAAGCATTGGGG +
Preference number: 3 (lower is better)
Translates to: LKGCPVKWGISVAIQSIGSGVSL*PSKALG
Trigger: CCCCAATGCTTTGGATGGCAACAGAGATACCCCACT...CCCAATGCTTTGGATGGCAACAGAGATACCCCACTTCACTGGGCAGCCTTTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535055.5
ENST00000536071.5
ENST00000536953.5
ENST00000539528.5
ENST00000539865.5
3UTR-3UTR CAA 90 bp AAGAGGCAAAGACTGCTGTTTCCTTTGATGAGGGGAAAGAGGTCCAGTCCCTTCGTTGGGTTGTTTGGTTaGGGAAGGGGAGGTGCTATG +
Preference number: 3 (lower is better)
Translates to: KRQRLLFPLMRGKRSSPFVGLFG*GRGGAM
Trigger: CATAGCACCTCCCCTTCCCAAACCAAACAACCCAAC...GAAGGGACTGGACCTCTTTCCCCTCATCAAAGGAAACAGCAGTCTTTGCCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
3UTR-3UTR CAA 90 bp CTCCACACAAGCCTCATCTTTCTCTGCTGCATAGTGGAGGGCTGTTCGGTTATACCAGGGCATTCACCTTaGCTATGCAGTGCTCTGAAC +
Preference number: 3 (lower is better)
Translates to: LHTSLIFLCCIVEGCSVIPGHSP*LCSALN
Trigger: GTTCAGAGCACTGCATAGCAAAGGTGAATGCCCTGG...TATAACCGAACAGCCCTCCACTATGCAGCAGAGAAAGATGAGGCTTGTGTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535055.5
ENST00000536071.5
ENST00000536953.5
3UTR-3UTR CAA 90 bp TGCCATCCAAAGCATTGGGGTTTGCACCATACTCCAATAGGACCTCCACACAAGCCAGGGCATTCACCTTaGCTATGCAGTGCTCTGAAC +
Preference number: 3 (lower is better)
Translates to: CHPKHWGLHHTPIGPPHKPGHSP*LCSALN
Trigger: GTTCAGAGCACTGCATAGCAAAGGTGAATGCCCTGG...CTTGTGTGGAGGTCCTATTGGAGTATGGTGCAAACCCCAATGCTTTGGATGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535055.5
ENST00000536071.5
ENST00000536953.5
3UTR-3UTR CAA 90 bp CCAACAGCTCTGTGGAGGAGCTCAAAGCAAGAGTCCTCTTTCTCTGTTCCAAGTAGTGGGGTATCTCTGTaGCCATCCAAAGCATTGGGG +
Preference number: 3 (lower is better)
Translates to: PTALWRSSKQESSFSVPSSGVSL*PSKALG
Trigger: CCCCAATGCTTTGGATGGCAACAGAGATACCCCACT...ACTTGGAACAGAGAAAGAGGACTCTTGCTTTGAGCTCCTCCACAGAGCTGTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536953.5
3UTR-3UTR CAA 90 bp TCTCTGTTGCCATCCAAAGCATTGGGGTTTGCACCATACTCCAATAGGACCTCCTTGCCATCCAAAGCATaGGGGTTTGCACCATACTCC +
Preference number: 3 (lower is better)
Translates to: SLLPSKALGFAPYSNRTSLPSKA*GFAPYS
Trigger: GGAGTATGGTGCAAACCCCAATGCTTTGGATGGCAA...GGAGGTCCTATTGGAGTATGGTGCAAACCCCAATGCTTTGGATGGCAACAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000535055.5
ENST00000536071.5
ENST00000536953.5
ENST00000539528.5
ENST00000539865.5
ENST00000540143.5
3UTR-3UTR CAA 90 bp GAAGTGGGGTATCTCTGTTGCCATCCAAAGCATTGGGGTTTGCACCATACTCCATTGCCATCCAAAGCATaGGGGTTTGCACCATACTCC +
Preference number: 3 (lower is better)
Translates to: EVGYLCCHPKHWGLHHTPLPSKA*GFAPYS
Trigger: GGAGTATGGTGCAAACCCCAATGCTTTGGATGGCAA...TGGAGTATGGTGCAAACCCCAATGCTTTGGATGGCAACAGAGATACCCCACTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000535055.5
ENST00000536071.5
ENST00000536953.5
ENST00000539528.5
ENST00000539865.5
ENST00000540143.5
3UTR-3UTR CAA 90 bp AAGTGGGGTATCTCTGTTGCCATCCAAAGCATTGGGGTTTGCACCATACTCCAAAGTGGGGTATCTCTGTaGCCATCCAAAGCATTGGGG +
Preference number: 3 (lower is better)
Translates to: KWGISVAIQSIGVCTILQSGVSL*PSKALG
Trigger: CCCCAATGCTTTGGATGGCAACAGAGATACCCCACT...TTGGAGTATGGTGCAAACCCCAATGCTTTGGATGGCAACAGAGATACCCCACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000535055.5
ENST00000536071.5
ENST00000536953.5
ENST00000539528.5
ENST00000539865.5
ENST00000540143.5
3UTR-3UTR CAA 90 bp GAAGTGGGGTATCTCTGTTGCCATCCAAAGCATTGGGGTTTGCACCATACTCCACCAAAGCATTGGGGTTaGCACCATACTCCAATAGGA +
Preference number: 3 (lower is better)
Translates to: EVGYLCCHPKHWGLHHTPPKHWG*HHTPIG
Trigger: TCCTATTGGAGTATGGTGCAAACCCCAATGCTTTGG...TGGAGTATGGTGCAAACCCCAATGCTTTGGATGGCAACAGAGATACCCCACTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000535055.5
ENST00000536071.5
ENST00000536953.5
ENST00000539528.5
ENST00000539865.5
ENST00000540143.5
3UTR-3UTR CAA 90 bp TCCAAAGCATTGGGGTTTGCACCATACTCCAATAGGACCTCCACACAAGCCTCACCAAAGCATTGGGGTTaGCACCATACTCCAATAGGA +
Preference number: 3 (lower is better)
Translates to: SKALGFAPYSNRTSTQASPKHWG*HHTPIG
Trigger: TCCTATTGGAGTATGGTGCAAACCCCAATGCTTTGG...TGAGGCTTGTGTGGAGGTCCTATTGGAGTATGGTGCAAACCCCAATGCTTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000535055.5
ENST00000536071.5
ENST00000536953.5
ENST00000539528.5
ENST00000539865.5
ENST00000540143.5
3UTR-3UTR CAA 90 bp AAGTGGGGTATCTCTGTTGCCATCCAAAGCATTGGGGTTTGCACCATACTCCAATTGCCATCCAAAGCATaGGGGTTTGCACCATACTCC +
Preference number: 3 (lower is better)
Translates to: KWGISVAIQSIGVCTILQLPSKA*GFAPYS
Trigger: GGAGTATGGTGCAAACCCCAATGCTTTGGATGGCAA...TTGGAGTATGGTGCAAACCCCAATGCTTTGGATGGCAACAGAGATACCCCACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000535055.5
ENST00000536071.5
ENST00000536953.5
ENST00000539528.5
ENST00000539865.5
ENST00000540143.5
3UTR CCA 72 bp ACAGAGCTCTTGTTATTTCAGAGCTACTGTAGCCCTTaGGCACAACCAACAGAAAGAGGCAAAGACTGCTGT +
Preference number: 3 (lower is better)
Translates to: TELLLFQSYCSP*AQPTERGKDCC
Trigger: ACAGCAGTCTTTGCCTCTTTCTGTTGGTTGTGCCCAAGGGCTACAGTAGCTCTGAAATAACAAGAGCTCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
3UTR-3UTR CAA 90 bp TTGGGCACAACCAACAGAAAGAGGCAAAGACTGCTGTTTCCTTTGATGAGGGGAAATTTAGTTACACTGTaGACTCCTTCCCTAAAGGGG +
Preference number: 3 (lower is better)
Translates to: LGTTNRKRQRLLFPLMRGNLVTL*TPSLKG
Trigger: CCCCTTTAGGGAAGGAGTCAACAGTGTAACTAAATT...TCCCCTCATCAAAGGAAACAGCAGTCTTTGCCTCTTTCTGTTGGTTGTGCCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
3UTR CCA 72 bp CAGAGTATCAGCACCATACAATGGGGGCAAGCAGGGTaGGGACAGAAAGGTAAAAGAATGAAATCCTTAGAT +
Preference number: 3 (lower is better)
Translates to: QSISTIQWGQAG*GQKGKRMKSLD
Trigger: ATCTAAGGATTTCATTCTTTTACCTTTCTGTCCCCACCCTGCTTGCCCCCATTGTATGGTGCTGATACTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000535988.3
ENST00000540782.1
3UTR CCA 72 bp CCATTTTTCCTCAATTCAAAGTGTCCAACAGCTCTGTaGAGGAGCTCAAAGCAAGAGTCCTCTTTCTCTGTT +
Preference number: 3 (lower is better)
Translates to: PFFLNSKCPTAL*RSSKQESSFSV
Trigger: AACAGAGAAAGAGGACTCTTGCTTTGAGCTCCTCCACAGAGCTGTTGGACACTTTGAATTGAGGAAAAATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536953.5
3UTR-3UTR CAA 90 bp ACAGAAGAAGACATCTGTTTTCCAATTAGCTGTGTCAGTAGATTCCATTCATTGGTTGGGTTGTTTGGTTaGGGAAGGGGAGGTGCTATG +
Preference number: 3 (lower is better)
Translates to: TEEDICFPISCVSRFHSLVGLFG*GRGGAM
Trigger: CATAGCACCTCCCCTTCCCAAACCAAACAACCCAAC...CAATGAATGGAATCTACTGACACAGCTAATTGGAAAACAGATGTCTTCTTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
3UTR-3UTR CAA 90 bp GTCATCCAGCCCAGTTCTGGATCTGCACCATTTGAGGTTATAGTATCTTCATCTAATTTAGTTACACTGTaGACTCCTTCCCTAAAGGGG +
Preference number: 3 (lower is better)
Translates to: VIQPSSGSAPFEVIVSSSNLVTL*TPSLKG
Trigger: CCCCTTTAGGGAAGGAGTCAACAGTGTAACTAAATT...AGATGAAGATACTATAACCTCAAATGGTGCAGATCCAGAACTGGGCTGGATGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
3UTR TCA 72 bp GTTTGGGAAGGGGAGGTGCTATGGAGGTTATTGTTGTaGCATGTTGCTTCGAAATCTATAAACCACACAACA +
Preference number: 3 (lower is better)
Translates to: VWEGEVLWRLLL*HVASKSINHTT
Trigger: TGTTGTGTGGTTTATAGATTTCGAAGCAACATGTCACAACAATAACCTCCATAGCACCTCCCCTTCCCAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
3UTR-3UTR CAA 90 bp TTTCCCACTCCCATCCCAAGTCCACCCTCCCACCAATTGTATTGTATAAATCAAATCTTTGGGACACAATaGCTGTTAGCTGAAATTGTG +
Preference number: 3 (lower is better)
Translates to: FPTPIPSPPSHQLYCINQIFGTQ*LLAEIV
Trigger: CACAATTTCAGCTAACAGCAATTGTGTCCCAAAGAT...TTGATTTATACAATACAATTGGTGGGAGGGTGGACTTGGGATGGGAGTGGGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
CDS-3UTR TCA 90 bp CCACACAGTCAGCATCTGACACCATACAGGCACAGTGCAAGGGCTTCAGTGTGCGCCGCTGTCAAGGCGTaGCCCGGAAGCAGAAGCTGT +
Preference number: 4 (lower is better)
Translates to: PHSQHLTPYRHSARASVCAAVKA*PGSRSC
Trigger: ACAGCTTCTGCTTCCGGGTCACGCCTTGACAGCGGC...GCACACTGAAGCCCTTGCACTGTGCCTGTATGGTGTCAGATGCTGACTGTGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539464.5
CDS-3UTR TCA 90 bp AGGCAGAGTATCAGCACCATACAATGGGGGCAAGCAGGGTGGGGACAGAAAGGTGCCGCTGTCAAGGCGTaGCCCGGAAGCAGAAGCTGT +
Preference number: 4 (lower is better)
Translates to: RQSISTIQWGQAGWGQKGAAVKA*PGSRSC
Trigger: ACAGCTTCTGCTTCCGGGTCACGCCTTGACAGCGGC...ACCTTTCTGTCCCCACCCTGCTTGCCCCCATTGTATGGTGCTGATACTCTGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000535988.3
ENST00000540782.1
CDS-3UTR GCA 90 bp TCTGTTCCAAGTCCCCTGACTAGCAGAGCCACCAGGCGGGAGATGGGTGTCTGGACCATACAGGCACAGTaGAAGGGCTTCAGTGTGCCA +
Preference number: 4 (lower is better)
Translates to: SVPSPLTSRATRREMGVWTIQAQ*KGFSVP
Trigger: TGGCACACTGAAGCCCTTGCACTGTGCCTGTATGGT...CCAGACACCCATCTCCCGCCTGGTGGCTCTGCTAGTCAGGGGACTTGGAACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536953.5
ENST00000539528.5
CDS-3UTR CCA 90 bp ACTCCTCCCTGCTGGAACACACACCGTAGGTGTAGGAACTGCCTGGGAATCCCAATTGCTGGGCTGAGGTaGGGGTTGAAAGCCGCTGTC +
Preference number: 4 (lower is better)
Translates to: TPPCWNTHRRCRNCLGIPIAGLR*GLKAAV
Trigger: GACAGCGGCTTTCAACCCCCACCTCAGCCCAGCAAT...TGGGATTCCCAGGCAGTTCCTACACCTACGGTGTGTGTTCCAGCAGGGAGGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
CDS-3UTR CCA 90 bp CCCATAACTCCTCCCTGCTGGAACACACACCGTAGGTGTAGGAACTGCCTGGGACCACCAGGCGGGAGATaGGTGTCTGGCCTATTAGGT +
Preference number: 4 (lower is better)
Translates to: PITPPCWNTHRRCRNCLGPPGGR*VSGLLG
Trigger: ACCTAATAGGCCAGACACCCATCTCCCGCCTGGTGG...TCCCAGGCAGTTCCTACACCTACGGTGTGTGTTCCAGCAGGGAGGAGTTATGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
CDS-3UTR TCA 90 bp CTTAAAGGCTGCCCAGTGAAGTGGGGTATCTCTGTTGCCATCCAAAGCATTGGGGCCGCTGTCAAGGCGTaGCCCGGAAGCAGAAGCTGT +
Preference number: 4 (lower is better)
Translates to: LKGCPVKWGISVAIQSIGAAVKA*PGSRSC
Trigger: ACAGCTTCTGCTTCCGGGTCACGCCTTGACAGCGGC...CCCAATGCTTTGGATGGCAACAGAGATACCCCACTTCACTGGGCAGCCTTTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535055.5
ENST00000536953.5
CDS-3UTR GCA 90 bp AGGGCATTGACAGAGGCCCCGCTCTCTAGGAGAGCCCGCACACACTCAGCATTGGCAAGGGCTTCAGTGTaGCATGAGTGCAGTTCACAT +
Preference number: 4 (lower is better)
Translates to: RALTEAPLSRRARTHSALARASV*HECSSH
Trigger: ATGTGAACTGCACTCATGGCACACTGAAGCCCTTGC...CAATGCTGAGTGTGTGCGGGCTCTCCTAGAGAGCGGGGCCTCTGTCAATGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535055.5
ENST00000536953.5
ENST00000539528.5
CDS-3UTR GCA 90 bp ACTCCTCCCTGCTGGAACACACACCGTAGGTGTAGGAACTGCCTGGGAATCCCAAACCTCACCCAGAGCTaGCTGCACGATGGTGCAAAC +
Preference number: 4 (lower is better)
Translates to: TPPCWNTHRRCRNCLGIPNLTQS*LHDGAN
Trigger: GTTTGCACCATCGTGCAGGCAGCTCTGGGTGAGGTT...TGGGATTCCCAGGCAGTTCCTACACCTACGGTGTGTGTTCCAGCAGGGAGGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
CDS-3UTR GCA 90 bp AGGGCATTGACAGAGGCCCCGCTCTCTAGGAGAGCCCGCACACACTCAGCATTGACCTTTGCTATGCAGTaGTCTGAACAGGAGGGTCAG +
Preference number: 4 (lower is better)
Translates to: RALTEAPLSRRARTHSALTFAMQ*SEQEGQ
Trigger: CTGACCCTCCTGTTCAGAGCACTGCATAGCAAAGGT...CAATGCTGAGTGTGTGCGGGCTCTCCTAGAGAGCGGGGCCTCTGTCAATGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535055.5
ENST00000536953.5
ENST00000539528.5
CDS-3UTR CCA 90 bp GTTCCAAGTCCCCTGACTAGCAGAGCCACCAGGCGGGAGATGGGTGTCTGGCCTGTGGGAAGGAACGGATaGCAGCAATTGTTCGGATTA +
Preference number: 4 (lower is better)
Translates to: VPSPLTSRATRREMGVWPVGRNG*QQLFGL
Trigger: TAATCCGAACAATTGCTGCCATCCGTTCCTTCCCAC...AGGCCAGACACCCATCTCCCGCCTGGTGGCTCTGCTAGTCAGGGGACTTGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536953.5
ENST00000539528.5
CDS-3UTR TCA 90 bp ACTCCTCCCTGCTGGAACACACACCGTAGGTGTAGGAACTGCCTGGGAATCCCAGGCTTCAGTGTGCCATaGGTGCAGTTCACATCTGCT +
Preference number: 4 (lower is better)
Translates to: TPPCWNTHRRCRNCLGIPGFSVP*VQFTSA
Trigger: AGCAGATGTGAACTGCACTCATGGCACACTGAAGCC...TGGGATTCCCAGGCAGTTCCTACACCTACGGTGTGTGTTCCAGCAGGGAGGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
CDS-3UTR TCA 90 bp AAGAGGCAAAGACTGCTGTTTCCTTTGATGAGGGGAAAGAGGTCCAGTCCCTTCGCCGCTGTCAAGGCGTaGCCCGGAAGCAGAAGCTGT +
Preference number: 4 (lower is better)
Translates to: KRQRLLFPLMRGKRSSPFAAVKA*PGSRSC
Trigger: ACAGCTTCTGCTTCCGGGTCACGCCTTGACAGCGGC...GAAGGGACTGGACCTCTTTCCCCTCATCAAAGGAAACAGCAGTCTTTGCCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536549.5
CDS-3UTR GCA 90 bp CCCATAACTCCTCCCTGCTGGAACACACACCGTAGGTGTAGGAACTGCCTGGGAACCATACAGGCACAGTaGAAGGGCTTCAGTGTGCCA +
Preference number: 4 (lower is better)
Translates to: PITPPCWNTHRRCRNCLGTIQAQ*KGFSVP
Trigger: TGGCACACTGAAGCCCTTGCACTGTGCCTGTATGGT...TCCCAGGCAGTTCCTACACCTACGGTGTGTGTTCCAGCAGGGAGGAGTTATGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
CDS-3UTR GCA 90 bp GCATTGACAGAGGCCCCGCTCTCTAGGAGAGCCCGCACACACTCAGCATTGTTCAGCCTCATCTTTCTCTaGTGCATAGTGGAGGGCTGT +
Preference number: 4 (lower is better)
Translates to: ALTEAPLSRRARTHSALFSLIFL*CIVEGC
Trigger: ACAGCCCTCCACTATGCAGCAGAGAAAGATGAGGCT...GAACAATGCTGAGTGTGTGCGGGCTCTCCTAGAGAGCGGGGCCTCTGTCAATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535055.5
ENST00000536953.5
ENST00000539528.5
CDS-3UTR CCA 90 bp AAAGGCAGAGTATCAGCACCATACAATGGGGGCAAGCAGGGTGGGGACAGAAAGATTGCTGGGCTGAGGTaGGGGTTGAAAGCCGCTGTC +
Preference number: 4 (lower is better)
Translates to: KGRVSAPYNGGKQGGDRKIAGLR*GLKAAV
Trigger: GACAGCGGCTTTCAACCCCCACCTCAGCCCAGCAAT...CTTTCTGTCCCCACCCTGCTTGCCCCCATTGTATGGTGCTGATACTCTGCCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000535988.3
ENST00000540782.1
CDS-3UTR CCA 90 bp GGACCTCCACACAAGCCTCATCTTTCTCTGCTGCATAGTGGAGGGCTGTTCGGTGGCTGCCCAGTGAAGTaGGGTATCTCTGTTGCCATC +
Preference number: 4 (lower is better)
Translates to: GPPHKPHLSLLHSGGLFGGCPVK*GISVAI
Trigger: GATGGCAACAGAGATACCCCACTTCACTGGGCAGCC...ACCGAACAGCCCTCCACTATGCAGCAGAGAAAGATGAGGCTTGTGTGGAGGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000535055.5
ENST00000536071.5
ENST00000536953.5
ENST00000539528.5
ENST00000539865.5
CDS-3UTR CCA 90 bp AAATGCCCCAGGACATGGCACAGTAGGGATGTCATCCAGCCCAGTTCTGGATCTCCACCAGGCGGGAGATaGGTGTCTGGCCTATTAGGT +
Preference number: 4 (lower is better)
Translates to: KCPRTWHSRDVIQPSSGSPPGGR*VSGLLG
Trigger: ACCTAATAGGCCAGACACCCATCTCCCGCCTGGTGG...AGATCCAGAACTGGGCTGGATGACATCCCTACTGTGCCATGTCCTGGGGCATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
CDS-3UTR CCA 90 bp CTCATCTTTCTCTGCTGCATAGTGGAGGGCTGTTCGGTTATACCCATCCAGGGCCCACCAGGCGGGAGATaGGTGTCTGGCCTATTAGGT +
Preference number: 4 (lower is better)
Translates to: LIFLCCIVEGCSVIPIQGPPGGR*VSGLLG
Trigger: ACCTAATAGGCCAGACACCCATCTCCCGCCTGGTGG...GCCCTGGATGGGTATAACCGAACAGCCCTCCACTATGCAGCAGAGAAAGATGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536953.5
ENST00000539528.5
CDS-3UTR CCA 90 bp ACTCCTCCCTGCTGGAACACACACCGTAGGTGTAGGAACTGCCTGGGAATCCCATCTGGCCACCTCTCGTaGCATGGTGCCATTTTTCCT +
Preference number: 4 (lower is better)
Translates to: TPPCWNTHRRCRNCLGIPSGHLS*HGAIFP
Trigger: AGGAAAAATGGCACCATGCCACGAGAGGTGGCCAGA...TGGGATTCCCAGGCAGTTCCTACACCTACGGTGTGTGTTCCAGCAGGGAGGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
CDS-3UTR CCA 90 bp AGTGAACTTTCCATTGGGAATGAAGACCCATGGGAAAAGGCAGCCCAGCCCATAGCATCGGGGAGATACTaGAGTCCCAGGCTACGGCGC +
Preference number: 4 (lower is better)
Translates to: SELSIGNEDPWEKAAQPIASGRY*SPRLRR
Trigger: GCGCCGTAGCCTGGGACTCCAGTATCTCCCCGATGC...TATGGGCTGGGCTGCCTTTTCCCATGGGTCTTCATTCCCAATGGAAAGTTCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
CDS-3UTR CCA 90 bp AGGCAGAGTATCAGCACCATACAATGGGGGCAAGCAGGGTGGGGACAGAAAGGTATCAGCACCATACAATaGGGGCAAGCAGGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: RQSISTIQWGQAGWGQKGISTIQ*GQAGWG
Trigger: TCCCCACCCTGCTTGCCCCCATTGTATGGTGCTGAT...ACCTTTCTGTCCCCACCCTGCTTGCCCCCATTGTATGGTGCTGATACTCTGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000535988.3
ENST00000540782.1
CDS-3UTR TCA 90 bp CCCATAACTCCTCCCTGCTGGAACACACACCGTAGGTGTAGGAACTGCCTGGGATTAAAGGCTGCCCAGTaGAGTGGGGTATCTCTGTTG +
Preference number: 4 (lower is better)
Translates to: PITPPCWNTHRRCRNCLGLKAAQ*SGVSLL
Trigger: CAACAGAGATACCCCACTTCACTGGGCAGCCTTTAA...TCCCAGGCAGTTCCTACACCTACGGTGTGTGTTCCAGCAGGGAGGAGTTATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
CDS-3UTR TCA 90 bp TGCCCAGTGAAGTGGGGTATCTCTGTTGCCATCCAAAGCATTGGGGTTTGCACCTGTAATCCAGGGCATTaGCAGAGGCCCCGCTCTCTA +
Preference number: 4 (lower is better)
Translates to: CPVKWGISVAIQSIGVCTCNPGH*QRPRSL
Trigger: TAGAGAGCGGGGCCTCTGTCAATGCCCTGGATTACA...GGTGCAAACCCCAATGCTTTGGATGGCAACAGAGATACCCCACTTCACTGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000536953.5
ENST00000539528.5
CDS-3UTR TCA 90 bp GGACCTCCACACAAGCCTCATCTTTCTCTGCTGCATAGTGGAGGGCTGTTCGGTTCATGGCAGCCCAGCTaGGCGGTGTATCATTGTTGT +
Preference number: 4 (lower is better)
Translates to: GPPHKPHLSLLHSGGLFGSWQPS*AVYHCC
Trigger: ACAACAATGATACACCGCTCAGCTGGGCTGCCATGA...ACCGAACAGCCCTCCACTATGCAGCAGAGAAAGATGAGGCTTGTGTGGAGGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536953.5
ENST00000539528.5
CDS-3UTR TCA 90 bp TGCCAACATTACCTTGAGTTAGAAGTTCAGACTGGAGGAGGGAAGAGATGGAGGGCCGCTGTCAAGGCGTaGCCCGGAAGCAGAAGCTGT +
Preference number: 4 (lower is better)
Translates to: CQHYLELEVQTGGGKRWRAAVKA*PGSRSC
Trigger: ACAGCTTCTGCTTCCGGGTCACGCCTTGACAGCGGC...CCTCCATCTCTTCCCTCCTCCAGTCTGAACTTCTAACTCAAGGTAATGTTGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535988.3
ENST00000540782.1
CDS-3UTR TCA 90 bp CTCGTGGCATGGTGCCATTTTTCCTCAATTCAAAGTGTCCAACAGCTCTGTGGAGCCGCTGTCAAGGCGTaGCCCGGAAGCAGAAGCTGT +
Preference number: 4 (lower is better)
Translates to: LVAWCHFSSIQSVQQLCGAAVKA*PGSRSC
Trigger: ACAGCTTCTGCTTCCGGGTCACGCCTTGACAGCGGC...TCCACAGAGCTGTTGGACACTTTGAATTGAGGAAAAATGGCACCATGCCACGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536953.5
CDS-3UTR GCA 90 bp AGGCAGAGTATCAGCACCATACAATGGGGGCAAGCAGGGTGGGGACAGAAAGGTAGTGCAGTTCACATCTaGTCCCCCTCTGATGAGGTC +
Preference number: 4 (lower is better)
Translates to: RQSISTIQWGQAGWGQKGSAVHI*SPSDEV
Trigger: GACCTCATCAGAGGGGGAGCAGATGTGAACTGCACT...ACCTTTCTGTCCCCACCCTGCTTGCCCCCATTGTATGGTGCTGATACTCTGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000535988.3
ENST00000540782.1
CDS-3UTR GCA 90 bp ACTCCTCCCTGCTGGAACACACACCGTAGGTGTAGGAACTGCCTGGGAATCCCAAGCCTCATCTTTCTCTaGTGCATAGTGGAGGGCTGT +
Preference number: 4 (lower is better)
Translates to: TPPCWNTHRRCRNCLGIPSLIFL*CIVEGC
Trigger: ACAGCCCTCCACTATGCAGCAGAGAAAGATGAGGCT...TGGGATTCCCAGGCAGTTCCTACACCTACGGTGTGTGTTCCAGCAGGGAGGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
CDS-3UTR GCA 90 bp AAATGCCCCAGGACATGGCACAGTAGGGATGTCATCCAGCCCAGTTCTGGATCTTGGAAGGCCCTTCACTaGATCGGGGAGATACTGGAG +
Preference number: 4 (lower is better)
Translates to: KCPRTWHSRDVIQPSSGSWKALH*IGEILE
Trigger: CTCCAGTATCTCCCCGATGCAGTGAAGGGCCTTCCA...AGATCCAGAACTGGGCTGGATGACATCCCTACTGTGCCATGTCCTGGGGCATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
CDS-3UTR CCA 90 bp CCCATAACTCCTCCCTGCTGGAACACACACCGTAGGTGTAGGAACTGCCTGGGAAAATGCCCCAGGACATaGCACAGTAGGGATGTCATC +
Preference number: 4 (lower is better)
Translates to: PITPPCWNTHRRCRNCLGKCPRT*HSRDVI
Trigger: GATGACATCCCTACTGTGCCATGTCCTGGGGCATTT...TCCCAGGCAGTTCCTACACCTACGGTGTGTGTTCCAGCAGGGAGGAGTTATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
CDS-3UTR TCA 90 bp GGAGGGCTGTTCGGTTATACCCATCCAGGGCATTCACCTTTGCTATGCAGTGCTGGCTTCAGTGTGCCATaGGTGCAGTTCACATCTGCT +
Preference number: 4 (lower is better)
Translates to: GGLFGYTHPGHSPLLCSAGFSVP*VQFTSA
Trigger: AGCAGATGTGAACTGCACTCATGGCACACTGAAGCC...AGCACTGCATAGCAAAGGTGAATGCCCTGGATGGGTATAACCGAACAGCCCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535055.5
ENST00000536071.5
ENST00000536953.5
CDS-3UTR TCA 90 bp GAAGAAAGAAAGGCAGAGTATCAGCACCATACAATGGGGGCAAGCAGGGTGGGGGGCTTCAGTGTGCCATaGGTGCAGTTCACATCTGCT +
Preference number: 4 (lower is better)
Translates to: EERKAEYQHHTMGASRVGGFSVP*VQFTSA
Trigger: AGCAGATGTGAACTGCACTCATGGCACACTGAAGCC...CCCCACCCTGCTTGCCCCCATTGTATGGTGCTGATACTCTGCCTTTCTTTCTTC
53% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000535988.3
ENST00000540782.1
CDS-3UTR TCA 90 bp AAAGGCTGCCCAGTGAAGTGGGGTATCTCTGTTGCCATCCAAAGCATTGGGGTTTGTAATCCAGGGCATTaGCAGAGGCCCCGCTCTCTA +
Preference number: 4 (lower is better)
Translates to: KGCPVKWGISVAIQSIGVCNPGH*QRPRSL
Trigger: TAGAGAGCGGGGCCTCTGTCAATGCCCTGGATTACA...AACCCCAATGCTTTGGATGGCAACAGAGATACCCCACTTCACTGGGCAGCCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000536953.5
ENST00000539528.5
CDS-3UTR TCA 90 bp AAATGCCCCAGGACATGGCACAGTAGGGATGTCATCCAGCCCAGTTCTGGATCTTCATGGCAGCCCAGCTaGGCGGTGTATCATTGTTGT +
Preference number: 4 (lower is better)
Translates to: KCPRTWHSRDVIQPSSGSSWQPS*AVYHCC
Trigger: ACAACAATGATACACCGCTCAGCTGGGCTGCCATGA...AGATCCAGAACTGGGCTGGATGACATCCCTACTGTGCCATGTCCTGGGGCATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
CDS-3UTR GCA 90 bp AGCCTCATCTTTCTCTGCTGCATAGTGGAGGGCTGTTCGGTTATACCCATCCAGTCCAAACTGCCGAATTaGTGGGCTGAGGTGGGGGTT +
Preference number: 4 (lower is better)
Translates to: SLIFLCCIVEGCSVIPIQSKLPN*WAEVGV
Trigger: AACCCCCACCTCAGCCCAGCAATTCGGCAGTTTGGA...CTGGATGGGTATAACCGAACAGCCCTCCACTATGCAGCAGAGAAAGATGAGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000536071.5
ENST00000536953.5
ENST00000539464.5
CDS-3UTR GCA 90 bp AAAGGCAGAGTATCAGCACCATACAATGGGGGCAAGCAGGGTGGGGACAGAAAGAGTGCAGTTCACATCTaGTCCCCCTCTGATGAGGTC +
Preference number: 4 (lower is better)
Translates to: KGRVSAPYNGGKQGGDRKSAVHI*SPSDEV
Trigger: GACCTCATCAGAGGGGGAGCAGATGTGAACTGCACT...CTTTCTGTCCCCACCCTGCTTGCCCCCATTGTATGGTGCTGATACTCTGCCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000535988.3
ENST00000540782.1
CDS-3UTR GCA 90 bp CCTCATCTTTCTCTGCTGCATAGTGGAGGGCTGTTCGGTTATACCCATCCAGGGTCAGTGTGCCATGAGTaGAGTTCACATCTGCTCCCC +
Preference number: 4 (lower is better)
Translates to: PHLSLLHSGGLFGYTHPGSVCHE*SSHLLP
Trigger: GGGGAGCAGATGTGAACTGCACTCATGGCACACTGA...CCCTGGATGGGTATAACCGAACAGCCCTCCACTATGCAGCAGAGAAAGATGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535055.5
ENST00000536071.5
ENST00000536953.5
ENST00000539528.5
CDS-3UTR GCA 90 bp AAAGGCAGAGTATCAGCACCATACAATGGGGGCAAGCAGGGTGGGGACAGAAAGACCATACAGGCACAGTaGAAGGGCTTCAGTGTGCCA +
Preference number: 4 (lower is better)
Translates to: KGRVSAPYNGGKQGGDRKTIQAQ*KGFSVP
Trigger: TGGCACACTGAAGCCCTTGCACTGTGCCTGTATGGT...CTTTCTGTCCCCACCCTGCTTGCCCCCATTGTATGGTGCTGATACTCTGCCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000535988.3
ENST00000540782.1
CDS-3UTR GCA 90 bp GAAGAAAGAAAGGCAGAGTATCAGCACCATACAATGGGGGCAAGCAGGGTGGGGACCATACAGGCACAGTaGAAGGGCTTCAGTGTGCCA +
Preference number: 4 (lower is better)
Translates to: EERKAEYQHHTMGASRVGTIQAQ*KGFSVP
Trigger: TGGCACACTGAAGCCCTTGCACTGTGCCTGTATGGT...CCCCACCCTGCTTGCCCCCATTGTATGGTGCTGATACTCTGCCTTTCTTTCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000535988.3
ENST00000540782.1
CDS-3UTR GCA 90 bp GGACCTCCACACAAGCCTCATCTTTCTCTGCTGCATAGTGGAGGGCTGTTCGGTGTGGGGTATCTCTGTTaGCATCCAAAGCATTGGGGT +
Preference number: 4 (lower is better)
Translates to: GPPHKPHLSLLHSGGLFGVGYLC*HPKHWG
Trigger: ACCCCAATGCTTTGGATGGCAACAGAGATACCCCAC...ACCGAACAGCCCTCCACTATGCAGCAGAGAAAGATGAGGCTTGTGTGGAGGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000535055.5
ENST00000536071.5
ENST00000536953.5
ENST00000539528.5
ENST00000539865.5
ENST00000540143.5
CDS-3UTR GCA 90 bp AAATGCCCCAGGACATGGCACAGTAGGGATGTCATCCAGCCCAGTTCTGGATCTTGTGACAAGGAGTACTaGAGGGACAACCTCACCCAG +
Preference number: 4 (lower is better)
Translates to: KCPRTWHSRDVIQPSSGSCDKEY*RDNLTQ
Trigger: CTGGGTGAGGTTGTCCCTGCAGTACTCCTTGTCACA...AGATCCAGAACTGGGCTGGATGACATCCCTACTGTGCCATGTCCTGGGGCATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
CDS-3UTR CCA 90 bp TTCAGAGCTACTGTAGCCCTTGGGCACAACCAACAGAAAGAGGCAAAGACTGCTATTGCTGGGCTGAGGTaGGGGTTGAAAGCCGCTGTC +
Preference number: 4 (lower is better)
Translates to: FRATVALGHNQQKEAKTAIAGLR*GLKAAV
Trigger: GACAGCGGCTTTCAACCCCCACCTCAGCCCAGCAAT...AGCAGTCTTTGCCTCTTTCTGTTGGTTGTGCCCAAGGGCTACAGTAGCTCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
CDS-3UTR CCA 90 bp GGGTTTGCACCATACTCCAATAGGACCTCCACACAAGCCTCATCTTTCTCTGCTATTGCTGGGCTGAGGTaGGGGTTGAAAGCCGCTGTC +
Preference number: 4 (lower is better)
Translates to: GFAPYSNRTSTQASSFSAIAGLR*GLKAAV
Trigger: GACAGCGGCTTTCAACCCCCACCTCAGCCCAGCAAT...AGCAGAGAAAGATGAGGCTTGTGTGGAGGTCCTATTGGAGTATGGTGCAAACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535055.5
ENST00000536071.5
ENST00000536953.5
ENST00000539528.5
ENST00000540143.5
CDS-3UTR CCA 90 bp CCAAAGCATTGGGGTTTGCACCATACTCCAATAGGACCTCCACACAAGCCTCATATTGCTGGGCTGAGGTaGGGGTTGAAAGCCGCTGTC +
Preference number: 4 (lower is better)
Translates to: PKHWGLHHTPIGPPHKPHIAGLR*GLKAAV
Trigger: GACAGCGGCTTTCAACCCCCACCTCAGCCCAGCAAT...ATGAGGCTTGTGTGGAGGTCCTATTGGAGTATGGTGCAAACCCCAATGCTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535055.5
ENST00000536071.5
ENST00000536953.5
ENST00000539528.5
ENST00000540143.5
CDS-3UTR CCA 90 bp TGCCCAGTGAAGTGGGGTATCTCTGTTGCCATCCAAAGCATTGGGGTTTGCACCAAACTGCCGAATTGCTaGGCTGAGGTGGGGGTTGAA +
Preference number: 4 (lower is better)
Translates to: CPVKWGISVAIQSIGVCTKLPNC*AEVGVE
Trigger: TTCAACCCCCACCTCAGCCCAGCAATTCGGCAGTTT...GGTGCAAACCCCAATGCTTTGGATGGCAACAGAGATACCCCACTTCACTGGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000536071.5
ENST00000536953.5
CDS-3UTR CCA 90 bp CACACAAGCCTCATCTTTCTCTGCTGCATAGTGGAGGGCTGTTCGGTTATACCCGGCTGCCCAGTGAAGTaGGGTATCTCTGTTGCCATC +
Preference number: 4 (lower is better)
Translates to: HTSLIFLCCIVEGCSVIPGCPVK*GISVAI
Trigger: GATGGCAACAGAGATACCCCACTTCACTGGGCAGCC...GGGTATAACCGAACAGCCCTCCACTATGCAGCAGAGAAAGATGAGGCTTGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000535055.5
ENST00000536071.5
ENST00000536953.5
ENST00000539528.5
ENST00000539865.5
CDS-3UTR CCA 90 bp AGGGCTGTTCGGTTATACCCATCCAGGGCATTCACCTGTAAAAAGGGAGGAACTCCACCAGGCGGGAGATaGGTGTCTGGCCTATTAGGT +
Preference number: 4 (lower is better)
Translates to: RAVRLYPSRAFTCKKGGTPPGGR*VSGLLG
Trigger: ACCTAATAGGCCAGACACCCATCTCCCGCCTGGTGG...AGTTCCTCCCTTTTTACAGGTGAATGCCCTGGATGGGTATAACCGAACAGCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539528.5
CDS-3UTR CCA 90 bp TTGACAGAGGCCCCGCTCTCTAGGAGAGCCCGCACACACTCAGCATTGTTCTTATGTCCAACAGCTCTGTaGAGGAGCTCAAAGCAAGAG +
Preference number: 4 (lower is better)
Translates to: LTEAPLSRRARTHSALFLCPTAL*RSSKQE
Trigger: CTCTTGCTTTGAGCTCCTCCACAGAGCTGTTGGACA...TAAGAACAATGCTGAGTGTGTGCGGGCTCTCCTAGAGAGCGGGGCCTCTGTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536953.5
CDS-3UTR CCA 90 bp CCCATAACTCCTCCCTGCTGGAACACACACCGTAGGTGTAGGAACTGCCTGGGACCACCTCTCGTGGCATaGTGCCATTTTTCCTCAATT +
Preference number: 4 (lower is better)
Translates to: PITPPCWNTHRRCRNCLGPPLVA*CHFSSI
Trigger: AATTGAGGAAAAATGGCACCATGCCACGAGAGGTGG...TCCCAGGCAGTTCCTACACCTACGGTGTGTGTTCCAGCAGGGAGGAGTTATGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
CDS-3UTR CCA 90 bp TGCTGCATAGTGGAGGGCTGTTCGGTTATACCCATCCAGGGCATTCACCTCGGCATCAGGCAGGAAAGCTaGACCAGCAATCCACTTTCT +
Preference number: 4 (lower is better)
Translates to: CCIVEGCSVIPIQGIHLGIRQES*TSNPLS
Trigger: AGAAAGTGGATTGCTGGTCCAGCTTTCCTGCCTGAT...GCCGAGGTGAATGCCCTGGATGGGTATAACCGAACAGCCCTCCACTATGCAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539464.5
ENST00000539865.5
ENST00000540143.5
CDS-3UTR CCA 90 bp AGGCTGCCCAGTGAAGTGGGGTATCTCTGTTGCCATCCAAAGCATTGGGGTTTGCTCCAAACGAATTGCTaGGCTGAGGTGGGGGTTGAA +
Preference number: 4 (lower is better)
Translates to: RLPSEVGYLCCHPKHWGLLQTNC*AEVGVE
Trigger: TTCAACCCCCACCTCAGCCCAGCAATTCGTTTGGAG...CAAACCCCAATGCTTTGGATGGCAACAGAGATACCCCACTTCACTGGGCAGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000535055.5
ENST00000539528.5
CDS-3UTR TCA 90 bp CATCTTTCTCTGCTGCATAGTGGAGGGCTGTTCGGTTATACCCATCCAGGGCATGGCTTCAGTGTGCCATaGGTGCAGTTCACATCTGCT +
Preference number: 4 (lower is better)
Translates to: HLSLLHSGGLFGYTHPGHGFSVP*VQFTSA
Trigger: AGCAGATGTGAACTGCACTCATGGCACACTGAAGCC...ATGCCCTGGATGGGTATAACCGAACAGCCCTCCACTATGCAGCAGAGAAAGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000535055.5
ENST00000536071.5
ENST00000536953.5
ENST00000539464.5
ENST00000539528.5
ENST00000539865.5
ENST00000540143.5
CDS-3UTR TCA 90 bp CAGAGTATCAGCACCATACAATGGGGGCAAGCAGGGTGGGGACAGAAAGGTAAAGGCTTCAGTGTGCCATaGGTGCAGTTCACATCTGCT +
Preference number: 4 (lower is better)
Translates to: QSISTIQWGQAGWGQKGKGFSVP*VQFTSA
Trigger: AGCAGATGTGAACTGCACTCATGGCACACTGAAGCC...TTTACCTTTCTGTCCCCACCCTGCTTGCCCCCATTGTATGGTGCTGATACTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000535988.3
ENST00000540782.1
CDS-3UTR TCA 90 bp CCACACAAGCCTCATCTTTCTCTGCTGCATAGTGGAGGGCTGTTCGGTTATACCGGCTTCAGTGTGCCATaGGTGCAGTTCACATCTGCT +
Preference number: 4 (lower is better)
Translates to: PHKPHLSLLHSGGLFGYTGFSVP*VQFTSA
Trigger: AGCAGATGTGAACTGCACTCATGGCACACTGAAGCC...GGTATAACCGAACAGCCCTCCACTATGCAGCAGAGAAAGATGAGGCTTGTGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000535055.5
ENST00000536071.5
ENST00000536953.5
ENST00000539464.5
ENST00000539528.5
ENST00000539865.5
ENST00000540143.5
CDS-3UTR GCA 90 bp CTCTGTTGCCATCCAAAGCATTGGGGTTTGCACCATACTCCAATAGGACCTCCATCCAAACTGCCGAATTaGTGGGCTGAGGTGGGGGTT +
Preference number: 4 (lower is better)
Translates to: LCCHPKHWGLHHTPIGPPSKLPN*WAEVGV
Trigger: AACCCCCACCTCAGCCCAGCAATTCGGCAGTTTGGA...TGGAGGTCCTATTGGAGTATGGTGCAAACCCCAATGCTTTGGATGGCAACAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536071.5
ENST00000536953.5
CDS-3UTR GCA 90 bp AGGGCATTCACCTCGGCTCCTTTTTCCAGAAGTAACTCCACACAGTCAGCATCTTCCAAACTGCCGAATTaGTGGGCTGAGGTGGGGGTT +
Preference number: 4 (lower is better)
Translates to: RAFTSAPFSRSNSTQSASSKLPN*WAEVGV
Trigger: AACCCCCACCTCAGCCCAGCAATTCGGCAGTTTGGA...AGATGCTGACTGTGTGGAGTTACTTCTGGAAAAAGGAGCCGAGGTGAATGCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000539464.5
CDS-3UTR GCA 90 bp CCACACAAGCCTCATCTTTCTCTGCTGCATAGTGGAGGGCTGTTCGGTTATACCAGTGCAGTTCACATCTaGTCCCCCTCTGATGAGGTC +
Preference number: 4 (lower is better)
Translates to: PHKPHLSLLHSGGLFGYTSAVHI*SPSDEV
Trigger: GACCTCATCAGAGGGGGAGCAGATGTGAACTGCACT...GGTATAACCGAACAGCCCTCCACTATGCAGCAGAGAAAGATGAGGCTTGTGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535055.5
ENST00000536071.5
ENST00000536953.5
ENST00000539528.5
CDS-3UTR GCA 90 bp TTTCTCTGCTGCATAGTGGAGGGCTGTTCGGTTATACCCATCCAGGGCATTCACAGTGCAGTTCACATCTaGTCCCCCTCTGATGAGGTC +
Preference number: 4 (lower is better)
Translates to: FLCCIVEGCSVIPIQGIHSAVHI*SPSDEV
Trigger: GACCTCATCAGAGGGGGAGCAGATGTGAACTGCACT...GTGAATGCCCTGGATGGGTATAACCGAACAGCCCTCCACTATGCAGCAGAGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535055.5
ENST00000536071.5
ENST00000536953.5
ENST00000539528.5
CDS-3UTR GCA 90 bp CCTCCACACAAGCCTCATCTTTCTCTGCTGCATAGTGGAGGGCTGTTCGGTTATACCATACAGGCACAGTaGAAGGGCTTCAGTGTGCCA +
Preference number: 4 (lower is better)
Translates to: PPHKPHLSLLHSGGLFGYTIQAQ*KGFSVP
Trigger: TGGCACACTGAAGCCCTTGCACTGTGCCTGTATGGT...ATAACCGAACAGCCCTCCACTATGCAGCAGAGAAAGATGAGGCTTGTGTGGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000535055.5
ENST00000536071.5
ENST00000536953.5
ENST00000539464.5
ENST00000539528.5
ENST00000539865.5
ENST00000540143.5
CDS-3UTR GCA 90 bp GAAGTAACTCCACACAGTCAGCATCTGACACCATACAGGCACAGTGCAAGGGCTACCATACAGGCACAGTaGAAGGGCTTCAGTGTGCCA +
Preference number: 4 (lower is better)
Translates to: EVTPHSQHLTPYRHSARATIQAQ*KGFSVP
Trigger: TGGCACACTGAAGCCCTTGCACTGTGCCTGTATGGT...AGCCCTTGCACTGTGCCTGTATGGTGTCAGATGCTGACTGTGTGGAGTTACTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539464.5
ENST00000539865.5
ENST00000540143.5
CDS-3UTR GCA 90 bp AAATGCCCCAGGACATGGCACAGTAGGGATGTCATCCAGCCCAGTTCTGGATCTAGCCTCATCTTTCTCTaGTGCATAGTGGAGGGCTGT +
Preference number: 4 (lower is better)
Translates to: KCPRTWHSRDVIQPSSGSSLIFL*CIVEGC
Trigger: ACAGCCCTCCACTATGCAGCAGAGAAAGATGAGGCT...AGATCCAGAACTGGGCTGGATGACATCCCTACTGTGCCATGTCCTGGGGCATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
CDS-3UTR GCA 90 bp AAATGCCCCAGGACATGGCACAGTAGGGATGTCATCCAGCCCAGTTCTGGATCTGTGGGGTATCTCTGTTaGCATCCAAAGCATTGGGGT +
Preference number: 4 (lower is better)
Translates to: KCPRTWHSRDVIQPSSGSVGYLC*HPKHWG
Trigger: ACCCCAATGCTTTGGATGGCAACAGAGATACCCCAC...AGATCCAGAACTGGGCTGGATGACATCCCTACTGTGCCATGTCCTGGGGCATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
CDS-3UTR GCA 90 bp CTCATCTTTCTCTGCTGCATAGTGGAGGGCTGTTCGGTTATACCCATCCAGGGCGTGGGGTATCTCTGTTaGCATCCAAAGCATTGGGGT +
Preference number: 4 (lower is better)
Translates to: LIFLCCIVEGCSVIPIQGVGYLC*HPKHWG
Trigger: ACCCCAATGCTTTGGATGGCAACAGAGATACCCCAC...GCCCTGGATGGGTATAACCGAACAGCCCTCCACTATGCAGCAGAGAAAGATGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000535055.5
ENST00000536071.5
ENST00000536953.5
ENST00000539528.5
ENST00000539865.5
ENST00000540143.5
CDS-3UTR GCA 90 bp ACTCCTCCCTGCTGGAACACACACCGTAGGTGTAGGAACTGCCTGGGAATCCCAATTGTTCTTAAAGGCTaGCCAGTGAAGTGGGGTATC +
Preference number: 4 (lower is better)
Translates to: TPPCWNTHRRCRNCLGIPIVLKG*PVKWGI
Trigger: GATACCCCACTTCACTGGGCAGCCTTTAAGAACAAT...TGGGATTCCCAGGCAGTTCCTACACCTACGGTGTGTGTTCCAGCAGGGAGGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
CDS-3UTR GCA 90 bp CCCATAACTCCTCCCTGCTGGAACACACACCGTAGGTGTAGGAACTGCCTGGGAATTGTTCTTAAAGGCTaGCCAGTGAAGTGGGGTATC +
Preference number: 4 (lower is better)
Translates to: PITPPCWNTHRRCRNCLGIVLKG*PVKWGI
Trigger: GATACCCCACTTCACTGGGCAGCCTTTAAGAACAAT...TCCCAGGCAGTTCCTACACCTACGGTGTGTGTTCCAGCAGGGAGGAGTTATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
CDS-3UTR GCA 90 bp AAATGCCCCAGGACATGGCACAGTAGGGATGTCATCCAGCCCAGTTCTGGATCTAGTTTTTCACATAGCTaGGGGTCTCTGGCCACCTCT +
Preference number: 4 (lower is better)
Translates to: KCPRTWHSRDVIQPSSGSSFSHS*GSLATS
Trigger: AGAGGTGGCCAGAGACCCGCAGCTATGTGAAAAACT...AGATCCAGAACTGGGCTGGATGACATCCCTACTGTGCCATGTCCTGGGGCATTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
CDS-3UTR GCA 90 bp TTCAGAGCTACTGTAGCCCTTGGGCACAACCAACAGAAAGAGGCAAAGACTGCTTTGTCCAGGCTGGAGTaGAATGGCGCGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: FRATVALGHNQQKEAKTALSRLE*NGAILA
Trigger: AGCCAAGATCGCGCCATTGCACTCCAGCCTGGACAA...AGCAGTCTTTGCCTCTTTCTGTTGGTTGTGCCCAAGGGCTACAGTAGCTCTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
CDS-3UTR GCA 90 bp AAGAGGCAAAGACTGCTGTTTCCTTTGATGAGGGGAAAGAGGTCCAGTCCCTTCCCAGTCCCTTCCAAATaGCCCAGGACATGGCACAGT +
Preference number: 4 (lower is better)
Translates to: KRQRLLFPLMRGKRSSPFPVPSK*PRTWHS
Trigger: ACTGTGCCATGTCCTGGGGCATTTGGAAGGGACTGG...GAAGGGACTGGACCTCTTTCCCCTCATCAAAGGAAACAGCAGTCTTTGCCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
CDS-3UTR GCA 90 bp AAGAGGCAAAGACTGCTGTTTCCTTTGATGAGGGGAAAGAGGTCCAGTCCCTTCCCCATAACTCCTCCCTaGTGGAACACACACCGTAGG +
Preference number: 4 (lower is better)
Translates to: KRQRLLFPLMRGKRSSPFPITPP*WNTHRR
Trigger: CCTACGGTGTGTGTTCCAGCAGGGAGGAGTTATGGG...GAAGGGACTGGACCTCTTTCCCCTCATCAAAGGAAACAGCAGTCTTTGCCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
CDS-3UTR GCA 90 bp CTTCATGGCAGCCCAGCTGAGCGGTGTATCATTGTTGTAATCCAGGGCATTGACATGCTCCAAACGAATTaGTGGGCTGAGGTGGGGGTT +
Preference number: 4 (lower is better)
Translates to: LHGSPAERCIIVVIQGIDMLQTN*WAEVGV
Trigger: AACCCCCACCTCAGCCCAGCAATTCGTTTGGAGCAT...GTCAATGCCCTGGATTACAACAATGATACACCGCTCAGCTGGGCTGCCATGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539528.5
CDS-3UTR GCA 90 bp AAGGATGCTGACACTCTCAAGATTTCCCTTCATGGCAGCCCAGCTGAGCGGTGTACCTTTGCTATGCAGTaGTCTGAACAGGAGGGTCAG +
Preference number: 4 (lower is better)
Translates to: KDADTLKISLHGSPAERCTFAMQ*SEQEGQ
Trigger: CTGACCCTCCTGTTCAGAGCACTGCATAGCAAAGGT...ACACCGCTCAGCTGGGCTGCCATGAAGGGAAATCTTGAGAGTGTCAGCATCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536953.5
ENST00000539528.5
CDS-3UTR CCA 90 bp AGGCAGAGTATCAGCACCATACAATGGGGGCAAGCAGGGTGGGGACAGAAAGGTGTGGGAAGGAACGGATaGCAGCAATTGTTCGGATTA +
Preference number: 4 (lower is better)
Translates to: RQSISTIQWGQAGWGQKGVGRNG*QQLFGL
Trigger: TAATCCGAACAATTGCTGCCATCCGTTCCTTCCCAC...ACCTTTCTGTCCCCACCCTGCTTGCCCCCATTGTATGGTGCTGATACTCTGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000535988.3
ENST00000540782.1
CDS-3UTR CCA 90 bp GAGAGCCCGCACACACTCAGCATTGTTCTTAAAGGCTGCCCAGTGAAGTGGGGTCTCTACATTATCATGTaGGAAGGAACGGATGGCAGC +
Preference number: 4 (lower is better)
Translates to: ESPHTLSIVLKGCPVKWGLYIIM*EGTDGS
Trigger: GCTGCCATCCGTTCCTTCCCACATGATAATGTAGAG...ACCCCACTTCACTGGGCAGCCTTTAAGAACAATGCTGAGTGTGTGCGGGCTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535055.5
ENST00000536953.5
ENST00000539528.5
ENST00000539865.5
CDS-3UTR CCA 90 bp TCTCTGTTGCCATCCAAAGCATTGGGGTTTGCACCATACTCCAATAGGACCTCCGGCTGCCCAGTGAAGTaGGGTATCTCTGTTGCCATC +
Preference number: 4 (lower is better)
Translates to: SLLPSKALGFAPYSNRTSGCPVK*GISVAI
Trigger: GATGGCAACAGAGATACCCCACTTCACTGGGCAGCC...GGAGGTCCTATTGGAGTATGGTGCAAACCCCAATGCTTTGGATGGCAACAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535055.5
ENST00000536071.5
ENST00000536953.5
ENST00000539528.5
ENST00000539865.5
CDS-3UTR CCA 90 bp AGTGAACTTTCCATTGGGAATGAAGACCCATGGGAAAAGGCAGCCCAGCCCATAGGCTGCCCAGTGAAGTaGGGTATCTCTGTTGCCATC +
Preference number: 4 (lower is better)
Translates to: SELSIGNEDPWEKAAQPIGCPVK*GISVAI
Trigger: GATGGCAACAGAGATACCCCACTTCACTGGGCAGCC...TATGGGCTGGGCTGCCTTTTCCCATGGGTCTTCATTCCCAATGGAAAGTTCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
CDS-3UTR CCA 90 bp GCATTGGGGTTTGCACCATACTCCAATAGGACCTCCACACAAGCCTCATCTTTCGGCTGCCCAGTGAAGTaGGGTATCTCTGTTGCCATC +
Preference number: 4 (lower is better)
Translates to: ALGFAPYSNRTSTQASSFGCPVK*GISVAI
Trigger: GATGGCAACAGAGATACCCCACTTCACTGGGCAGCC...GAAAGATGAGGCTTGTGTGGAGGTCCTATTGGAGTATGGTGCAAACCCCAATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535055.5
ENST00000536071.5
ENST00000536953.5
ENST00000539528.5
ENST00000539865.5
CDS-3UTR CCA 90 bp CCTCATCTTTCTCTGCTGCATAGTGGAGGGCTGTTCGGTTATACCCATCCAGGGCGGGAGATGGGTGTCTaGCCTATTAGGTTGATGACT +
Preference number: 4 (lower is better)
Translates to: PHLSLLHSGGLFGYTHPGREMGV*PIRLMT
Trigger: AGTCATCAACCTAATAGGCCAGACACCCATCTCCCG...CCCTGGATGGGTATAACCGAACAGCCCTCCACTATGCAGCAGAGAAAGATGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536953.5
ENST00000539528.5
CDS-3UTR CCA 90 bp TTGACAGAGGCCCCGCTCTCTAGGAGAGCCCGCACACACTCAGCATTGTTCTTACCACCTCTCGTGGCATaGTGCCATTTTTCCTCAATT +
Preference number: 4 (lower is better)
Translates to: LTEAPLSRRARTHSALFLPPLVA*CHFSSI
Trigger: AATTGAGGAAAAATGGCACCATGCCACGAGAGGTGG...TAAGAACAATGCTGAGTGTGTGCGGGCTCTCCTAGAGAGCGGGGCCTCTGTCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536953.5
CDS-3UTR CCA 90 bp GGTAGATGGACCATCACAAAAGGAGCTCTTACATGCTTTTCCCACTCCCATCCCGAGCTGCCTGCACGATaGTGCAAACATCTTCTCCGG +
Preference number: 4 (lower is better)
Translates to: GRWTITKGALTCFSHSHPELPAR*CKHLLR
Trigger: CCGGAGAAGATGTTTGCACCATCGTGCAGGCAGCTC...GGGATGGGAGTGGGAAAAGCATGTAAGAGCTCCTTTTGTGATGGTCCATCTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
CDS-3UTR CCA 90 bp CCACACAGTCAGCATCTGACACCATACAGGCACAGTGCAAGGGCTTCAGTGTGCATCAGGCAGGAAAGCTaGACCAGCAATCCACTTTCT +
Preference number: 4 (lower is better)
Translates to: PHSQHLTPYRHSARASVCIRQES*TSNPLS
Trigger: AGAAAGTGGATTGCTGGTCCAGCTTTCCTGCCTGAT...GCACACTGAAGCCCTTGCACTGTGCCTGTATGGTGTCAGATGCTGACTGTGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539464.5
ENST00000539865.5
ENST00000540143.5
CDS-3UTR TCA 90 bp TGTTGCCATCCAAAGCATTGGGGTTTGCACCATACTCCAATAGGACCTCCACACGGCTTCAGTGTGCCATaGGTGCAGTTCACATCTGCT +
Preference number: 4 (lower is better)
Translates to: CCHPKHWGLHHTPIGPPHGFSVP*VQFTSA
Trigger: AGCAGATGTGAACTGCACTCATGGCACACTGAAGCC...GTGTGGAGGTCCTATTGGAGTATGGTGCAAACCCCAATGCTTTGGATGGCAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535055.5
ENST00000536071.5
ENST00000536953.5
ENST00000539528.5
ENST00000539865.5
ENST00000540143.5
CDS-3UTR TCA 90 bp TGGGGTTTGCACCATACTCCAATAGGACCTCCACACAAGCCTCATCTTTCTCTGGGCTTCAGTGTGCCATaGGTGCAGTTCACATCTGCT +
Preference number: 4 (lower is better)
Translates to: WGLHHTPIGPPHKPHLSLGFSVP*VQFTSA
Trigger: AGCAGATGTGAACTGCACTCATGGCACACTGAAGCC...CAGAGAAAGATGAGGCTTGTGTGGAGGTCCTATTGGAGTATGGTGCAAACCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535055.5
ENST00000536071.5
ENST00000536953.5
ENST00000539528.5
ENST00000539865.5
ENST00000540143.5
CDS-3UTR TCA 90 bp TTGGGCACAACCAACAGAAAGAGGCAAAGACTGCTGTTTCCTTTGATGAGGGGATGTAATCCAGGGCATTaGCAGAGGCCCCGCTCTCTA +
Preference number: 4 (lower is better)
Translates to: LGTTNRKRQRLLFPLMRGCNPGH*QRPRSL
Trigger: TAGAGAGCGGGGCCTCTGTCAATGCCCTGGATTACA...TCCCCTCATCAAAGGAAACAGCAGTCTTTGCCTCTTTCTGTTGGTTGTGCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
CDS-3UTR GCA 90 bp TCCACACAGTCAGCATCTGACACCATACAGGCACAGTGCAAGGGCTTCAGTGTGCTCAAGGTGTTCACATaGTCCAAACTGCCGAATTGC +
Preference number: 4 (lower is better)
Translates to: STQSASDTIQAQCKGFSVLKVFT*SKLPNC
Trigger: GCAATTCGGCAGTTTGGAGCATGTGAACACCTTGAG...CACACTGAAGCCCTTGCACTGTGCCTGTATGGTGTCAGATGCTGACTGTGTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539464.5
ENST00000539865.5
CDS-3UTR GCA 90 bp CTCAGCATTGTTCTTAAAGGCTGCCCAGTGAAGTGGGGTATCTCTGTTGCCATCAGTGCAGTTCACATCTaGTCCCCCTCTGATGAGGTC +
Preference number: 4 (lower is better)
Translates to: LSIVLKGCPVKWGISVAISAVHI*SPSDEV
Trigger: GACCTCATCAGAGGGGGAGCAGATGTGAACTGCACT...GATGGCAACAGAGATACCCCACTTCACTGGGCAGCCTTTAAGAACAATGCTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000535055.5
ENST00000536953.5
ENST00000539528.5
CDS-3UTR GCA 90 bp TGTTGCCATCCAAAGCATTGGGGTTTGCACCATACTCCAATAGGACCTCCACACAGTGCAGTTCACATCTaGTCCCCCTCTGATGAGGTC +
Preference number: 4 (lower is better)
Translates to: CCHPKHWGLHHTPIGPPHSAVHI*SPSDEV
Trigger: GACCTCATCAGAGGGGGAGCAGATGTGAACTGCACT...GTGTGGAGGTCCTATTGGAGTATGGTGCAAACCCCAATGCTTTGGATGGCAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535055.5
ENST00000536071.5
ENST00000536953.5
ENST00000539528.5
CDS-3UTR GCA 90 bp TGGGGTTTGCACCATACTCCAATAGGACCTCCACACAAGCCTCATCTTTCTCTGTCAGTGTGCCATGAGTaGAGTTCACATCTGCTCCCC +
Preference number: 4 (lower is better)
Translates to: WGLHHTPIGPPHKPHLSLSVCHE*SSHLLP
Trigger: GGGGAGCAGATGTGAACTGCACTCATGGCACACTGA...CAGAGAAAGATGAGGCTTGTGTGGAGGTCCTATTGGAGTATGGTGCAAACCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535055.5
ENST00000536071.5
ENST00000536953.5
ENST00000539528.5
CDS-3UTR GCA 90 bp GGGTTTGCACCATACTCCAATAGGACCTCCACACAAGCCTCATCTTTCTCTGCTTCAGTGTGCCATGAGTaGAGTTCACATCTGCTCCCC +
Preference number: 4 (lower is better)
Translates to: GFAPYSNRTSTQASSFSASVCHE*SSHLLP
Trigger: GGGGAGCAGATGTGAACTGCACTCATGGCACACTGA...AGCAGAGAAAGATGAGGCTTGTGTGGAGGTCCTATTGGAGTATGGTGCAAACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535055.5
ENST00000536071.5
ENST00000536953.5
ENST00000539528.5
CDS-3UTR GCA 90 bp TGGGGTTTGCACCATACTCCAATAGGACCTCCACACAAGCCTCATCTTTCTCTGACCATACAGGCACAGTaGAAGGGCTTCAGTGTGCCA +
Preference number: 4 (lower is better)
Translates to: WGLHHTPIGPPHKPHLSLTIQAQ*KGFSVP
Trigger: TGGCACACTGAAGCCCTTGCACTGTGCCTGTATGGT...CAGAGAAAGATGAGGCTTGTGTGGAGGTCCTATTGGAGTATGGTGCAAACCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535055.5
ENST00000536071.5
ENST00000536953.5
ENST00000539528.5
ENST00000539865.5
ENST00000540143.5
CDS-3UTR GCA 90 bp TTTCTCTGCTGCATAGTGGAGGGCTGTTCGGTTATACCCATCCAGGGCATTCACCTCATCTTTCTCTGCTaGATAGTGGAGGGCTGTTCG +
Preference number: 4 (lower is better)
Translates to: FLCCIVEGCSVIPIQGIHLIFLC*IVEGCS
Trigger: CGAACAGCCCTCCACTATGCAGCAGAGAAAGATGAG...GTGAATGCCCTGGATGGGTATAACCGAACAGCCCTCCACTATGCAGCAGAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000535055.5
ENST00000536071.5
ENST00000536953.5
ENST00000539464.5
ENST00000539528.5
ENST00000539865.5
ENST00000540143.5
CDS-3UTR GCA 90 bp CCGCACACACTCAGCATTGTTCTTAAAGGCTGCCCAGTGAAGTGGGGTATCTCTCTCATCTTTCTCTGCTaGATAGTGGAGGGCTGTTCG +
Preference number: 4 (lower is better)
Translates to: PHTLSIVLKGCPVKWGISLIFLC*IVEGCS
Trigger: CGAACAGCCCTCCACTATGCAGCAGAGAAAGATGAG...AGAGATACCCCACTTCACTGGGCAGCCTTTAAGAACAATGCTGAGTGTGTGCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535055.5
ENST00000536953.5
ENST00000539528.5
ENST00000539865.5
CDS-3UTR GCA 90 bp CCTCCACACAAGCCTCATCTTTCTCTGCTGCATAGTGGAGGGCTGTTCGGTTATAGCCTCATCTTTCTCTaGTGCATAGTGGAGGGCTGT +
Preference number: 4 (lower is better)
Translates to: PPHKPHLSLLHSGGLFGYSLIFL*CIVEGC
Trigger: ACAGCCCTCCACTATGCAGCAGAGAAAGATGAGGCT...ATAACCGAACAGCCCTCCACTATGCAGCAGAGAAAGATGAGGCTTGTGTGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000535055.5
ENST00000536071.5
ENST00000536953.5
ENST00000539464.5
ENST00000539528.5
ENST00000539865.5
ENST00000540143.5
CDS-3UTR GCA 90 bp AGAAGTAACTCCACACAGTCAGCATCTGACACCATACAGGCACAGTGCAAGGGCAGCCTCATCTTTCTCTaGTGCATAGTGGAGGGCTGT +
Preference number: 4 (lower is better)
Translates to: RSNSTQSASDTIQAQCKGSLIFL*CIVEGC
Trigger: ACAGCCCTCCACTATGCAGCAGAGAAAGATGAGGCT...GCCCTTGCACTGTGCCTGTATGGTGTCAGATGCTGACTGTGTGGAGTTACTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539464.5
ENST00000539865.5
ENST00000540143.5
CDS-3UTR GCA 90 bp CCATCCAAAGCATTGGGGTTTGCACCATACTCCAATAGGACCTCCACACAAGCCAGCCTCATCTTTCTCTaGTGCATAGTGGAGGGCTGT +
Preference number: 4 (lower is better)
Translates to: PSKALGFAPYSNRTSTQASLIFL*CIVEGC
Trigger: ACAGCCCTCCACTATGCAGCAGAGAAAGATGAGGCT...GGCTTGTGTGGAGGTCCTATTGGAGTATGGTGCAAACCCCAATGCTTTGGATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535055.5
ENST00000536071.5
ENST00000536953.5
ENST00000539528.5
ENST00000539865.5
ENST00000540143.5
CDS-3UTR GCA 90 bp AGAAGTAACTCCACACAGTCAGCATCTGACACCATACAGGCACAGTGCAAGGGCGTGGGGTATCTCTGTTaGCATCCAAAGCATTGGGGT +
Preference number: 4 (lower is better)
Translates to: RSNSTQSASDTIQAQCKGVGYLC*HPKHWG
Trigger: ACCCCAATGCTTTGGATGGCAACAGAGATACCCCAC...GCCCTTGCACTGTGCCTGTATGGTGTCAGATGCTGACTGTGTGGAGTTACTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000539865.5
ENST00000540143.5
CDS-3UTR GCA 90 bp GGTAGATGGACCATCACAAAAGGAGCTCTTACATGCTTTTCCCACTCCCATCCCTCACCCAGAGCTGCCTaGACGATGGTGCAAACATCT +
Preference number: 4 (lower is better)
Translates to: GRWTITKGALTCFSHSHPSPRAA*TMVQTS
Trigger: AGATGTTTGCACCATCGTGCAGGCAGCTCTGGGTGA...GGGATGGGAGTGGGAAAAGCATGTAAGAGCTCCTTTTGTGATGGTCCATCTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
CDS-3UTR GCA 90 bp TTCAGAGCTACTGTAGCCCTTGGGCACAACCAACAGAAAGAGGCAAAGACTGCTTGTGACAAGGAGTACTaGAGGGACAACCTCACCCAG +
Preference number: 4 (lower is better)
Translates to: FRATVALGHNQQKEAKTACDKEY*RDNLTQ
Trigger: CTGGGTGAGGTTGTCCCTGCAGTACTCCTTGTCACA...AGCAGTCTTTGCCTCTTTCTGTTGGTTGTGCCCAAGGGCTACAGTAGCTCTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
CDS-3UTR GCA 90 bp AGCCTCATCTTTCTCTGCTGCATAGTGGAGGGCTGTTCGGTTATACCCATCCAGTCAGTGTGCCATGAGTaGAGTTCACATCTGCTCCCT +
Preference number: 4 (lower is better)
Translates to: SLIFLCCIVEGCSVIPIQSVCHE*SSHLLP
Trigger: AGGGAGCAGATGTGAACTGCACTCATGGCACACTGA...CTGGATGGGTATAACCGAACAGCCCTCCACTATGCAGCAGAGAAAGATGAGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539464.5
ENST00000539865.5
ENST00000540143.5
CDS-3UTR GCA 90 bp GAAGAAAGAAAGGCAGAGTATCAGCACCATACAATGGGGGCAAGCAGGGTGGGGCTCAAGGTGTTCACATaGTCCAAACGAATTGCTGGG +
Preference number: 4 (lower is better)
Translates to: EERKAEYQHHTMGASRVGLKVFT*SKRIAG
Trigger: CCCAGCAATTCGTTTGGAGCATGTGAACACCTTGAG...CCCCACCCTGCTTGCCCCCATTGTATGGTGCTGATACTCTGCCTTTCTTTCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540782.1
CDS-3UTR GCA 90 bp CCATCCAAAGCATTGGGGTTTGCACCATACTCCAATAGGACCTCCACACAAGCCACCTTTGCTATGCAGTaGTCTGAACAGGAGGGTCAG +
Preference number: 4 (lower is better)
Translates to: PSKALGFAPYSNRTSTQATFAMQ*SEQEGQ
Trigger: CTGACCCTCCTGTTCAGAGCACTGCATAGCAAAGGT...GGCTTGTGTGGAGGTCCTATTGGAGTATGGTGCAAACCCCAATGCTTTGGATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535055.5
ENST00000536071.5
ENST00000536953.5
ENST00000539528.5
CDS-3UTR CCA 90 bp CTCAGCATTGTTCTTAAAGGCTGCCCAGTGAAGTGGGGTATCTCTGTTGCCATCAAACTGCCGAATTGCTaGGCTGAGGTGGGGGTTGAA +
Preference number: 4 (lower is better)
Translates to: LSIVLKGCPVKWGISVAIKLPNC*AEVGVE
Trigger: TTCAACCCCCACCTCAGCCCAGCAATTCGGCAGTTT...GATGGCAACAGAGATACCCCACTTCACTGGGCAGCCTTTAAGAACAATGCTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536953.5
CDS-3UTR CCA 90 bp AGGGCATTCACCTCGGCTCCTTTTTCCAGAAGTAACTCCACACAGTCAGCATCTAAACTGCCGAATTGCTaGGCTGAGGTGGGGGTTGAA +
Preference number: 4 (lower is better)
Translates to: RAFTSAPFSRSNSTQSASKLPNC*AEVGVE
Trigger: TTCAACCCCCACCTCAGCCCAGCAATTCGGCAGTTT...AGATGCTGACTGTGTGGAGTTACTTCTGGAAAAAGGAGCCGAGGTGAATGCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000539464.5
CDS-3UTR CCA 90 bp TGGAGGGCTGTTCGGTTATACCCATCCAGGGCATTCACCTTTGCTATGCAGTGCGTGGGAAGGAACGGATaGCAGCAATTGTTCGGATTA +
Preference number: 4 (lower is better)
Translates to: WRAVRLYPSRAFTFAMQCVGRNG*QQLFGL
Trigger: TAATCCGAACAATTGCTGCCATCCGTTCCTTCCCAC...GCACTGCATAGCAAAGGTGAATGCCCTGGATGGGTATAACCGAACAGCCCTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535055.5
ENST00000536071.5
ENST00000536953.5
CDS-3UTR CCA 90 bp AAAGGCAGAGTATCAGCACCATACAATGGGGGCAAGCAGGGTGGGGACAGAAAGGTGGGAAGGAACGGATaGCAGCAATTGTTCGGATTA +
Preference number: 4 (lower is better)
Translates to: KGRVSAPYNGGKQGGDRKVGRNG*QQLFGL
Trigger: TAATCCGAACAATTGCTGCCATCCGTTCCTTCCCAC...CTTTCTGTCCCCACCCTGCTTGCCCCCATTGTATGGTGCTGATACTCTGCCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000535988.3
ENST00000540782.1
CDS-3UTR CCA 90 bp CTCATCTTTCTCTGCTGCATAGTGGAGGGCTGTTCGGTTATACCCATCCAGGGCGTGGGAAGGAACGGATaGCAGCAATTGTTCGGATTA +
Preference number: 4 (lower is better)
Translates to: LIFLCCIVEGCSVIPIQGVGRNG*QQLFGL
Trigger: TAATCCGAACAATTGCTGCCATCCGTTCCTTCCCAC...GCCCTGGATGGGTATAACCGAACAGCCCTCCACTATGCAGCAGAGAAAGATGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000535055.5
ENST00000536071.5
ENST00000536953.5
ENST00000539464.5
ENST00000539528.5
ENST00000539865.5
ENST00000540143.5
CDS-3UTR CCA 90 bp GAAGAAAGAAAGGCAGAGTATCAGCACCATACAATGGGGGCAAGCAGGGTGGGGCTCTACATTATCATGTaGGAAGGAACGGATGGCAGC +
Preference number: 4 (lower is better)
Translates to: EERKAEYQHHTMGASRVGLYIIM*EGTDGS
Trigger: GCTGCCATCCGTTCCTTCCCACATGATAATGTAGAG...CCCCACCCTGCTTGCCCCCATTGTATGGTGCTGATACTCTGCCTTTCTTTCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000535988.3
ENST00000540782.1
CDS-3UTR CCA 90 bp ACTCCACACAGTCAGCATCTGACACCATACAGGCACAGTGCAAGGGCTTCAGTGCTCTACATTATCATGTaGGAAGGAACGGATGGCAGC +
Preference number: 4 (lower is better)
Translates to: TPHSQHLTPYRHSARASVLYIIM*EGTDGS
Trigger: GCTGCCATCCGTTCCTTCCCACATGATAATGTAGAG...CACTGAAGCCCTTGCACTGTGCCTGTATGGTGTCAGATGCTGACTGTGTGGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539464.5
ENST00000539865.5
ENST00000540143.5
CDS-3UTR CCA 90 bp TCTGACCTCTGCGCCATAATCCAGAAGGATGCTGACACTCTCAAGATTTCCCTTGGCTGCCCAGTGAAGTaGGGTATCTCTGTTGCCATC +
Preference number: 4 (lower is better)
Translates to: SDLCAIIQKDADTLKISLGCPVK*GISVAI
Trigger: GATGGCAACAGAGATACCCCACTTCACTGGGCAGCC...AAGGGAAATCTTGAGAGTGTCAGCATCCTTCTGGATTATGGCGCAGAGGTCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536953.5
ENST00000539528.5
CDS-3UTR CCA 90 bp GCATTGGGGTTTGCACCATACTCCAATAGGACCTCCACACAAGCCTCATCTTTCTCTGGCCACCTCTCGTaGCATGGTGCCATTTTTCCT +
Preference number: 4 (lower is better)
Translates to: ALGFAPYSNRTSTQASSFSGHLS*HGAIFP
Trigger: AGGAAAAATGGCACCATGCCACGAGAGGTGGCCAGA...GAAAGATGAGGCTTGTGTGGAGGTCCTATTGGAGTATGGTGCAAACCCCAATGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536953.5
CDS-3UTR CCA 90 bp AGTGAACTTTCCATTGGGAATGAAGACCCATGGGAAAAGGCAGCCCAGCCCATACAAAGAAGCTGGCAGTaGAAGGCCCTTCACTGCATC +
Preference number: 4 (lower is better)
Translates to: SELSIGNEDPWEKAAQPIQRSWQ*KALHCI
Trigger: GATGCAGTGAAGGGCCTTCCACTGCCAGCTTCTTTG...TATGGGCTGGGCTGCCTTTTCCCATGGGTCTTCATTCCCAATGGAAAGTTCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
CDS-3UTR CCA 90 bp TTCAGAGCTACTGTAGCCCTTGGGCACAACCAACAGAAAGAGGCAAAGACTGCTCAAAGAAGCTGGCAGTaGAAGGCCCTTCACTGCATC +
Preference number: 4 (lower is better)
Translates to: FRATVALGHNQQKEAKTAQRSWQ*KALHCI
Trigger: GATGCAGTGAAGGGCCTTCCACTGCCAGCTTCTTTG...AGCAGTCTTTGCCTCTTTCTGTTGGTTGTGCCCAAGGGCTACAGTAGCTCTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
CDS-3UTR CCA 90 bp AAAGGCAGAGTATCAGCACCATACAATGGGGGCAAGCAGGGTGGGGACAGAAAGGTTAGAAGTTCAGACTaGAGGAGGGAAGAGATGGAG +
Preference number: 4 (lower is better)
Translates to: KGRVSAPYNGGKQGGDRKVRSSD*RREEME
Trigger: CTCCATCTCTTCCCTCCTCCAGTCTGAACTTCTAAC...CTTTCTGTCCCCACCCTGCTTGCCCCCATTGTATGGTGCTGATACTCTGCCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000535988.3
ENST00000540782.1
CDS-3UTR CCA 90 bp GAAGAAAGAAAGGCAGAGTATCAGCACCATACAATGGGGGCAAGCAGGGTGGGGGTTAGAAGTTCAGACTaGAGGAGGGAAGAGATGGAG +
Preference number: 4 (lower is better)
Translates to: EERKAEYQHHTMGASRVGVRSSD*RREEME
Trigger: CTCCATCTCTTCCCTCCTCCAGTCTGAACTTCTAAC...CCCCACCCTGCTTGCCCCCATTGTATGGTGCTGATACTCTGCCTTTCTTTCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000535988.3
ENST00000540782.1
CDS-3UTR CCA 90 bp AAGAGGCAAAGACTGCTGTTTCCTTTGATGAGGGGAAAGAGGTCCAGTCCCTTCCTCCAAACGAATTGCTaGGCTGAGGTGGGGGTTGAA +
Preference number: 4 (lower is better)
Translates to: KRQRLLFPLMRGKRSSPFLQTNC*AEVGVE
Trigger: TTCAACCCCCACCTCAGCCCAGCAATTCGTTTGGAG...GAAGGGACTGGACCTCTTTCCCCTCATCAAAGGAAACAGCAGTCTTTGCCTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536549.5
CDS-3UTR CCA 90 bp CCAAAGCATTGGGGTTTGCACCATACTCCAATAGGACCTCCACACAAGCCTCATCTCCAAACGAATTGCTaGGCTGAGGTGGGGGTTGAA +
Preference number: 4 (lower is better)
Translates to: PKHWGLHHTPIGPPHKPHLQTNC*AEVGVE
Trigger: TTCAACCCCCACCTCAGCCCAGCAATTCGTTTGGAG...ATGAGGCTTGTGTGGAGGTCCTATTGGAGTATGGTGCAAACCCCAATGCTTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000535055.5
ENST00000539528.5
ENST00000540143.5
3UTR CAA 72 bp GTGGGGTATCTCTGTTGCCATCCAAAGCATTGGGGTTaGCACCATACTCCAATAGGACCTCCACACAAGCCT +
Preference number: 4 (lower is better)
Translates to: VGYLCCHPKHWG*HHTPIGPPHKP
Trigger: AGGCTTGTGTGGAGGTCCTATTGGAGTATGGTGCAAACCCCAATGCTTTGGATGGCAACAGAGATACCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000535055.5
ENST00000536071.5
ENST00000536953.5
ENST00000539528.5
ENST00000539865.5
ENST00000540143.5
CDS-3UTR TCA 90 bp TTGGGCACAACCAACAGAAAGAGGCAAAGACTGCTGTTTCCTTTGATGAGGGGAGGCTTCAGTGTGCCATaGGTGCAGTTCACATCTGCT +
Preference number: 4 (lower is better)
Translates to: LGTTNRKRQRLLFPLMRGGFSVP*VQFTSA
Trigger: AGCAGATGTGAACTGCACTCATGGCACACTGAAGCC...TCCCCTCATCAAAGGAAACAGCAGTCTTTGCCTCTTTCTGTTGGTTGTGCCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
CDS-3UTR TCA 90 bp GTGGGGTATCTCTGTTGCCATCCAAAGCATTGGGGTTTGCACCATACTCCAATAGGCTTCAGTGTGCCATaGGTGCAGTTCACATCTGCT +
Preference number: 4 (lower is better)
Translates to: VGYLCCHPKHWGLHHTPIGFSVP*VQFTSA
Trigger: AGCAGATGTGAACTGCACTCATGGCACACTGAAGCC...TATTGGAGTATGGTGCAAACCCCAATGCTTTGGATGGCAACAGAGATACCCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000535055.5
ENST00000536071.5
ENST00000536953.5
ENST00000539528.5
ENST00000539865.5
ENST00000540143.5
CDS-3UTR TCA 90 bp AAGCCTCATCTTTCTCTGCTGCATAGTGGAGGGCTGTTCGGTTATACCCATCCATTAAAGGCTGCCCAGTaGAGTGGGGTATCTCTGTTG +
Preference number: 4 (lower is better)
Translates to: KPHLSLLHSGGLFGYTHPLKAAQ*SGVSLL
Trigger: CAACAGAGATACCCCACTTCACTGGGCAGCCTTTAA...TGGATGGGTATAACCGAACAGCCCTCCACTATGCAGCAGAGAAAGATGAGGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535055.5
ENST00000536071.5
ENST00000536953.5
ENST00000539528.5
ENST00000539865.5
CDS-3UTR TCA 90 bp TGGGGTTTGCACCATACTCCAATAGGACCTCCACACAAGCCTCATCTTTCTCTGTTAAAGGCTGCCCAGTaGAGTGGGGTATCTCTGTTG +
Preference number: 4 (lower is better)
Translates to: WGLHHTPIGPPHKPHLSLLKAAQ*SGVSLL
Trigger: CAACAGAGATACCCCACTTCACTGGGCAGCCTTTAA...CAGAGAAAGATGAGGCTTGTGTGGAGGTCCTATTGGAGTATGGTGCAAACCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535055.5
ENST00000536071.5
ENST00000536953.5
ENST00000539528.5
ENST00000539865.5
CDS-3UTR TCA 90 bp CTCAGCATTGTTCTTAAAGGCTGCCCAGTGAAGTGGGGTATCTCTGTTGCCATCTTAAAGGCTGCCCAGTaGAGTGGGGTATCTCTGTTG +
Preference number: 4 (lower is better)
Translates to: LSIVLKGCPVKWGISVAILKAAQ*SGVSLL
Trigger: CAACAGAGATACCCCACTTCACTGGGCAGCCTTTAA...GATGGCAACAGAGATACCCCACTTCACTGGGCAGCCTTTAAGAACAATGCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535055.5
ENST00000536953.5
ENST00000539528.5
ENST00000539865.5
CDS-3UTR TCA 90 bp TCTCTGTTGCCATCCAAAGCATTGGGGTTTGCACCATACTCCAATAGGACCTCCTTAAAGGCTGCCCAGTaGAGTGGGGTATCTCTGTTG +
Preference number: 4 (lower is better)
Translates to: SLLPSKALGFAPYSNRTSLKAAQ*SGVSLL
Trigger: CAACAGAGATACCCCACTTCACTGGGCAGCCTTTAA...GGAGGTCCTATTGGAGTATGGTGCAAACCCCAATGCTTTGGATGGCAACAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535055.5
ENST00000536071.5
ENST00000536953.5
ENST00000539528.5
ENST00000539865.5
CDS-3UTR TCA 90 bp TTCACCTCGGCTCCTTTTTCCAGAAGTAACTCCACACAGTCAGCATCTGACACCTTAAAGGCTGCCCAGTaGAGTGGGGTATCTCTGTTG +
Preference number: 4 (lower is better)
Translates to: FTSAPFSRSNSTQSASDTLKAAQ*SGVSLL
Trigger: CAACAGAGATACCCCACTTCACTGGGCAGCCTTTAA...GGTGTCAGATGCTGACTGTGTGGAGTTACTTCTGGAAAAAGGAGCCGAGGTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539865.5
CDS-3UTR TCA 90 bp CATACTCCAATAGGACCTCCACACAAGCCTCATCTTTCTCTGCTGCATAGTGGATCATGGCAGCCCAGCTaGGCGGTGTATCATTGTTGT +
Preference number: 4 (lower is better)
Translates to: HTPIGPPHKPHLSLLHSGSWQPS*AVYHCC
Trigger: ACAACAATGATACACCGCTCAGCTGGGCTGCCATGA...TCCACTATGCAGCAGAGAAAGATGAGGCTTGTGTGGAGGTCCTATTGGAGTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536953.5
ENST00000539528.5
CDS-3UTR TCA 90 bp CCCATAACTCCTCCCTGCTGGAACACACACCGTAGGTGTAGGAACTGCCTGGGATGGATCTGCACCATTTaGGGTTATAGTATCTTCATC +
Preference number: 4 (lower is better)
Translates to: PITPPCWNTHRRCRNCLGWICTI*GYSIFI
Trigger: GATGAAGATACTATAACCTCAAATGGTGCAGATCCA...TCCCAGGCAGTTCCTACACCTACGGTGTGTGTTCCAGCAGGGAGGAGTTATGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
CDS-3UTR GCA 90 bp AAGAAAGAAAGGCAGAGTATCAGCACCATACAATGGGGGCAAGCAGGGTGGGGACTCAAGGTGTTCACATaGTCCAAACTGCCGAATTGC +
Preference number: 4 (lower is better)
Translates to: KKERQSISTIQWGQAGWGLKVFT*SKLPNC
Trigger: GCAATTCGGCAGTTTGGAGCATGTGAACACCTTGAG...TCCCCACCCTGCTTGCCCCCATTGTATGGTGCTGATACTCTGCCTTTCTTTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535988.3
CDS-3UTR GCA 90 bp CATCTTTCTCTGCTGCATAGTGGAGGGCTGTTCGGTTATACCCATCCAGGGCATCTCAAGGTGTTCACATaGTCCAAACTGCCGAATTGC +
Preference number: 4 (lower is better)
Translates to: HLSLLHSGGLFGYTHPGHLKVFT*SKLPNC
Trigger: GCAATTCGGCAGTTTGGAGCATGTGAACACCTTGAG...ATGCCCTGGATGGGTATAACCGAACAGCCCTCCACTATGCAGCAGAGAAAGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000536071.5
ENST00000536953.5
ENST00000539464.5
ENST00000539865.5
CDS-3UTR GCA 90 bp TTGGGCACAACCAACAGAAAGAGGCAAAGACTGCTGTTTCCTTTGATGAGGGGAAGTGCAGTTCACATCTaGTCCCCCTCTGATGAGGTC +
Preference number: 4 (lower is better)
Translates to: LGTTNRKRQRLLFPLMRGSAVHI*SPSDEV
Trigger: GACCTCATCAGAGGGGGAGCAGATGTGAACTGCACT...TCCCCTCATCAAAGGAAACAGCAGTCTTTGCCTCTTTCTGTTGGTTGTGCCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
CDS-3UTR GCA 90 bp TTGCCATCCAAAGCATTGGGGTTTGCACCATACTCCAATAGGACCTCCACACAATCAGTGTGCCATGAGTaGAGTTCACATCTGCTCCCC +
Preference number: 4 (lower is better)
Translates to: LPSKALGFAPYSNRTSTQSVCHE*SSHLLP
Trigger: GGGGAGCAGATGTGAACTGCACTCATGGCACACTGA...TTGTGTGGAGGTCCTATTGGAGTATGGTGCAAACCCCAATGCTTTGGATGGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535055.5
ENST00000536071.5
ENST00000536953.5
ENST00000539528.5
CDS-3UTR GCA 90 bp CTCCACACAAGCCTCATCTTTCTCTGCTGCATAGTGGAGGGCTGTTCGGTTATAGCAAGGGCTTCAGTGTaGCATGAGTGCAGTTCACAT +
Preference number: 4 (lower is better)
Translates to: LHTSLIFLCCIVEGCSVIARASV*HECSSH
Trigger: ATGTGAACTGCACTCATGGCACACTGAAGCCCTTGC...TATAACCGAACAGCCCTCCACTATGCAGCAGAGAAAGATGAGGCTTGTGTGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000535055.5
ENST00000536071.5
ENST00000536953.5
ENST00000539464.5
ENST00000539528.5
ENST00000539865.5
ENST00000540143.5
CDS-3UTR GCA 90 bp GCATTGGGGTTTGCACCATACTCCAATAGGACCTCCACACAAGCCTCATCTTTCGCAAGGGCTTCAGTGTaGCATGAGTGCAGTTCACAT +
Preference number: 4 (lower is better)
Translates to: ALGFAPYSNRTSTQASSFARASV*HECSSH
Trigger: ATGTGAACTGCACTCATGGCACACTGAAGCCCTTGC...GAAAGATGAGGCTTGTGTGGAGGTCCTATTGGAGTATGGTGCAAACCCCAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535055.5
ENST00000536071.5
ENST00000536953.5
ENST00000539528.5
ENST00000539865.5
ENST00000540143.5
CDS-3UTR GCA 90 bp AGTGAACTTTCCATTGGGAATGAAGACCCATGGGAAAAGGCAGCCCAGCCCATAGCAAGGGCTTCAGTGTaGCATGAGTGCAGTTCACAT +
Preference number: 4 (lower is better)
Translates to: SELSIGNEDPWEKAAQPIARASV*HECSSH
Trigger: ATGTGAACTGCACTCATGGCACACTGAAGCCCTTGC...TATGGGCTGGGCTGCCTTTTCCCATGGGTCTTCATTCCCAATGGAAAGTTCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
CDS-3UTR GCA 90 bp GAAGTGGGGTATCTCTGTTGCCATCCAAAGCATTGGGGTTTGCACCATACTCCAGCAAGGGCTTCAGTGTaGCATGAGTGCAGTTCACAT +
Preference number: 4 (lower is better)
Translates to: EVGYLCCHPKHWGLHHTPARASV*HECSSH
Trigger: ATGTGAACTGCACTCATGGCACACTGAAGCCCTTGC...TGGAGTATGGTGCAAACCCCAATGCTTTGGATGGCAACAGAGATACCCCACTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000535055.5
ENST00000536071.5
ENST00000536953.5
ENST00000539528.5
ENST00000539865.5
ENST00000540143.5
CDS-3UTR GCA 90 bp ATCTTTCTCTGCTGCATAGTGGAGGGCTGTTCGGTTATACCCATCCAGGGCATTGCAAGGGCTTCAGTGTaGCATGAGTGCAGTTCACAT +
Preference number: 4 (lower is better)
Translates to: IFLCCIVEGCSVIPIQGIARASV*HECSSH
Trigger: ATGTGAACTGCACTCATGGCACACTGAAGCCCTTGC...AATGCCCTGGATGGGTATAACCGAACAGCCCTCCACTATGCAGCAGAGAAAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000535055.5
ENST00000536071.5
ENST00000536953.5
ENST00000539464.5
ENST00000539528.5
ENST00000539865.5
ENST00000540143.5
CDS-3UTR GCA 90 bp GGTTTGCACCATACTCCAATAGGACCTCCACACAAGCCTCATCTTTCTCTGCTGGCAAGGGCTTCAGTGTaGCATGAGTGCAGTTCACAT +
Preference number: 4 (lower is better)
Translates to: GLHHTPIGPPHKPHLSLLARASV*HECSSH
Trigger: ATGTGAACTGCACTCATGGCACACTGAAGCCCTTGC...CAGCAGAGAAAGATGAGGCTTGTGTGGAGGTCCTATTGGAGTATGGTGCAAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000535055.5
ENST00000536071.5
ENST00000536953.5
ENST00000539528.5
ENST00000539865.5
ENST00000540143.5
CDS-3UTR GCA 90 bp GGGGTATCTCTGTTGCCATCCAAAGCATTGGGGTTTGCACCATACTCCAATAGGGCAAGGGCTTCAGTGTaGCATGAGTGCAGTTCACAT +
Preference number: 4 (lower is better)
Translates to: GVSLLPSKALGFAPYSNRARASV*HECSSH
Trigger: ATGTGAACTGCACTCATGGCACACTGAAGCCCTTGC...CCTATTGGAGTATGGTGCAAACCCCAATGCTTTGGATGGCAACAGAGATACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000535055.5
ENST00000536071.5
ENST00000536953.5
ENST00000539528.5
ENST00000539865.5
ENST00000540143.5
CDS-3UTR GCA 90 bp GTATCTCTGTTGCCATCCAAAGCATTGGGGTTTGCACCATACTCCAATAGGACCACCATACAGGCACAGTaGAAGGGCTTCAGTGTGCCA +
Preference number: 4 (lower is better)
Translates to: VSLLPSKALGFAPYSNRTTIQAQ*KGFSVP
Trigger: TGGCACACTGAAGCCCTTGCACTGTGCCTGTATGGT...GGTCCTATTGGAGTATGGTGCAAACCCCAATGCTTTGGATGGCAACAGAGATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535055.5
ENST00000536071.5
ENST00000536953.5
ENST00000539528.5
ENST00000539865.5
ENST00000540143.5
CDS-3UTR GCA 90 bp ACCTCGGCTCCTTTTTCCAGAAGTAACTCCACACAGTCAGCATCTGACACCATAACCATACAGGCACAGTaGAAGGGCTTCAGTGTGCCA +
Preference number: 4 (lower is better)
Translates to: TSAPFSRSNSTQSASDTITIQAQ*KGFSVP
Trigger: TGGCACACTGAAGCCCTTGCACTGTGCCTGTATGGT...TATGGTGTCAGATGCTGACTGTGTGGAGTTACTTCTGGAAAAAGGAGCCGAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000539464.5
ENST00000539865.5
ENST00000540143.5
CDS-3UTR GCA 90 bp GAAGTGGGGTATCTCTGTTGCCATCCAAAGCATTGGGGTTTGCACCATACTCCACTCATCTTTCTCTGCTaGATAGTGGAGGGCTGTTCG +
Preference number: 4 (lower is better)
Translates to: EVGYLCCHPKHWGLHHTPLIFLC*IVEGCS
Trigger: CGAACAGCCCTCCACTATGCAGCAGAGAAAGATGAG...TGGAGTATGGTGCAAACCCCAATGCTTTGGATGGCAACAGAGATACCCCACTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000535055.5
ENST00000536071.5
ENST00000536953.5
ENST00000539528.5
ENST00000539865.5
ENST00000540143.5
CDS-3UTR GCA 90 bp AGGGCTGTTCGGTTATACCCATCCAGGGCATTCACCTGTAAAAAGGGAGGAACTAGCCTCATCTTTCTCTaGTGCATAGTGGAGGGCTGT +
Preference number: 4 (lower is better)
Translates to: RAVRLYPSRAFTCKKGGTSLIFL*CIVEGC
Trigger: ACAGCCCTCCACTATGCAGCAGAGAAAGATGAGGCT...AGTTCCTCCCTTTTTACAGGTGAATGCCCTGGATGGGTATAACCGAACAGCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539528.5
CDS-3UTR GCA 90 bp CTCTGTTGCCATCCAAAGCATTGGGGTTTGCACCATACTCCAATAGGACCTCCAGTGGGGTATCTCTGTTaGCATCCAAAGCATTGGGGT +
Preference number: 4 (lower is better)
Translates to: LCCHPKHWGLHHTPIGPPVGYLC*HPKHWG
Trigger: ACCCCAATGCTTTGGATGGCAACAGAGATACCCCAC...TGGAGGTCCTATTGGAGTATGGTGCAAACCCCAATGCTTTGGATGGCAACAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000535055.5
ENST00000536071.5
ENST00000536953.5
ENST00000539528.5
ENST00000539865.5
ENST00000540143.5
CDS-3UTR GCA 90 bp ACACTCTCAAGATTTCCCTTCATGGCAGCCCAGCTGAGCGGTGTATCATTGTTGGTGGGGTATCTCTGTTaGCATCCAAAGCATTGGGGT +
Preference number: 4 (lower is better)
Translates to: TLSRFPFMAAQLSGVSLLVGYLC*HPKHWG
Trigger: ACCCCAATGCTTTGGATGGCAACAGAGATACCCCAC...CAACAATGATACACCGCTCAGCTGGGCTGCCATGAAGGGAAATCTTGAGAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536953.5
ENST00000539528.5
CDS-3UTR GCA 90 bp GGATTCTTCTGGACCGTTAACCACGTCCCCAAAGGAAAACCACACACACATTATAACCTCACCCAGAGCTaGCTGCACGATGGTGCAAAC +
Preference number: 4 (lower is better)
Translates to: GFFWTVNHVPKGKPHTHYNLTQS*LHDGAN
Trigger: GTTTGCACCATCGTGCAGGCAGCTCTGGGTGAGGTT...ATAATGTGTGTGTGGTTTTCCTTTGGGGACGTGGTTAACGGTCCAGAAGAATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
CDS-3UTR GCA 90 bp TATACCCATCCAGGGCATTCACCTCGGCTCCTTTTTCCAGAAGTAACTCCACACTCAGTGTGCCATGAGTaGAGTTCACATCTGCTCCCT +
Preference number: 4 (lower is better)
Translates to: YTHPGHSPRLLFPEVTPHSVCHE*SSHLLP
Trigger: AGGGAGCAGATGTGAACTGCACTCATGGCACACTGA...GTGTGGAGTTACTTCTGGAAAAAGGAGCCGAGGTGAATGCCCTGGATGGGTATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000539464.5
ENST00000539865.5
ENST00000540143.5
CDS-3UTR GCA 90 bp AGTGGGGTATCTCTGTTGCCATCCAAAGCATTGGGGTTTGCACCATACTCCAATATGCTCCAAACGAATTaGTGGGCTGAGGTGGGGGTT +
Preference number: 4 (lower is better)
Translates to: SGVSLLPSKALGFAPYSNMLQTN*WAEVGV
Trigger: AACCCCCACCTCAGCCCAGCAATTCGTTTGGAGCAT...ATTGGAGTATGGTGCAAACCCCAATGCTTTGGATGGCAACAGAGATACCCCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000535055.5
ENST00000539528.5
ENST00000540143.5
CDS-3UTR GCA 90 bp TTGGGCACAACCAACAGAAAGAGGCAAAGACTGCTGTTTCCTTTGATGAGGGGAATGCTCCAAACGAATTaGTGGGCTGAGGTGGGGGTT +
Preference number: 4 (lower is better)
Translates to: LGTTNRKRQRLLFPLMRGMLQTN*WAEVGV
Trigger: AACCCCCACCTCAGCCCAGCAATTCGTTTGGAGCAT...TCCCCTCATCAAAGGAAACAGCAGTCTTTGCCTCTTTCTGTTGGTTGTGCCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536549.5
CDS-3UTR GCA 90 bp GCTCCTTTTTCCAGAAGTAACTCCACACAGTCAGCATCTGACACCATACAGGCAATGCTCCAAACGAATTaGTGGGCTGAGGTGGGGGTT +
Preference number: 4 (lower is better)
Translates to: APFSRSNSTQSASDTIQAMLQTN*WAEVGV
Trigger: AACCCCCACCTCAGCCCAGCAATTCGTTTGGAGCAT...TGCCTGTATGGTGTCAGATGCTGACTGTGTGGAGTTACTTCTGGAAAAAGGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000540143.5
CDS-3UTR GCA 90 bp TTTCTCTGCTGCATAGTGGAGGGCTGTTCGGTTATACCCATCCAGGGCATTCACCTCAAGGTGTTCACATaGTCCAAACGAATTGCTGGG +
Preference number: 4 (lower is better)
Translates to: FLCCIVEGCSVIPIQGIHLKVFT*SKRIAG
Trigger: CCCAGCAATTCGTTTGGAGCATGTGAACACCTTGAG...GTGAATGCCCTGGATGGGTATAACCGAACAGCCCTCCACTATGCAGCAGAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535055.5
ENST00000539528.5
ENST00000540143.5
CDS-3UTR GCA 90 bp GCATTGGGGTTTGCACCATACTCCAATAGGACCTCCACACAAGCCTCATCTTTCACCTTTGCTATGCAGTaGTCTGAACAGGAGGGTCAG +
Preference number: 4 (lower is better)
Translates to: ALGFAPYSNRTSTQASSFTFAMQ*SEQEGQ
Trigger: CTGACCCTCCTGTTCAGAGCACTGCATAGCAAAGGT...GAAAGATGAGGCTTGTGTGGAGGTCCTATTGGAGTATGGTGCAAACCCCAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535055.5
ENST00000536071.5
ENST00000536953.5
ENST00000539528.5
CDS-3UTR GCA 90 bp CACACAAGCCTCATCTTTCTCTGCTGCATAGTGGAGGGCTGTTCGGTTATACCCCATTCACCTTTGCTATaGAGTGCTCTGAACAGGAGG +
Preference number: 4 (lower is better)
Translates to: HTSLIFLCCIVEGCSVIPHSPLL*SALNRR
Trigger: CCTCCTGTTCAGAGCACTGCATAGCAAAGGTGAATG...GGGTATAACCGAACAGCCCTCCACTATGCAGCAGAGAAAGATGAGGCTTGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535055.5
ENST00000536071.5
ENST00000536953.5
CDS-3UTR GCA 90 bp CCAATAGGACCTCCACACAAGCCTCATCTTTCTCTGCTGCATAGTGGAGGGCTGAGCAGCAAAGAAGCTTaGATGGTTACCCACTACCTT +
Preference number: 4 (lower is better)
Translates to: PIGPPHKPHLSLLHSGGLSSKEA*MVTHYL
Trigger: AAGGTAGTGGGTAACCATGCAAGCTTCTTTGCTGCT...CAGCCCTCCACTATGCAGCAGAGAAAGATGAGGCTTGTGTGGAGGTCCTATTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539528.5
CDS-3UTR CCA 90 bp TGCCAACATTACCTTGAGTTAGAAGTTCAGACTGGAGGAGGGAAGAGATGGAGGAAACTGCCGAATTGCTaGGCTGAGGTGGGGGTTGAA +
Preference number: 4 (lower is better)
Translates to: CQHYLELEVQTGGGKRWRKLPNC*AEVGVE
Trigger: TTCAACCCCCACCTCAGCCCAGCAATTCGGCAGTTT...CCTCCATCTCTTCCCTCCTCCAGTCTGAACTTCTAACTCAAGGTAATGTTGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535988.3
CDS-3UTR CCA 90 bp CCATCCAAAGCATTGGGGTTTGCACCATACTCCAATAGGACCTCCACACAAGCCGTGGGAAGGAACGGATaGCAGCAATTGTTCGGATTA +
Preference number: 4 (lower is better)
Translates to: PSKALGFAPYSNRTSTQAVGRNG*QQLFGL
Trigger: TAATCCGAACAATTGCTGCCATCCGTTCCTTCCCAC...GGCTTGTGTGGAGGTCCTATTGGAGTATGGTGCAAACCCCAATGCTTTGGATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535055.5
ENST00000536071.5
ENST00000536953.5
ENST00000539528.5
ENST00000539865.5
ENST00000540143.5
CDS-3UTR CCA 90 bp CTTTCTCTGCTGCATAGTGGAGGGCTGTTCGGTTATACCCATCCAGGGCATTCAGTGGGAAGGAACGGATaGCAGCAATTGTTCGGATTA +
Preference number: 4 (lower is better)
Translates to: LSLLHSGGLFGYTHPGHSVGRNG*QQLFGL
Trigger: TAATCCGAACAATTGCTGCCATCCGTTCCTTCCCAC...TGAATGCCCTGGATGGGTATAACCGAACAGCCCTCCACTATGCAGCAGAGAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000535055.5
ENST00000536071.5
ENST00000536953.5
ENST00000539464.5
ENST00000539528.5
ENST00000539865.5
ENST00000540143.5
CDS-3UTR CCA 90 bp AAAGGCTGCCCAGTGAAGTGGGGTATCTCTGTTGCCATCCAAAGCATTGGGGTTCTCTACATTATCATGTaGGAAGGAACGGATGGCAGC +
Preference number: 4 (lower is better)
Translates to: KGCPVKWGISVAIQSIGVLYIIM*EGTDGS
Trigger: GCTGCCATCCGTTCCTTCCCACATGATAATGTAGAG...AACCCCAATGCTTTGGATGGCAACAGAGATACCCCACTTCACTGGGCAGCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535055.5
ENST00000536071.5
ENST00000536953.5
ENST00000539528.5
ENST00000539865.5
CDS-3UTR CCA 90 bp GGATTCTTCTGGACCGTTAACCACGTCCCCAAAGGAAAACCACACACACATTATGAGCTGCCTGCACGATaGTGCAAACATCTTCTCCGG +
Preference number: 4 (lower is better)
Translates to: GFFWTVNHVPKGKPHTHYELPAR*CKHLLR
Trigger: CCGGAGAAGATGTTTGCACCATCGTGCAGGCAGCTC...ATAATGTGTGTGTGGTTTTCCTTTGGGGACGTGGTTAACGGTCCAGAAGAATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
CDS-3UTR CCA 90 bp TGGCTATGCCAACATTACCTTGAGTTAGAAGTTCAGACTGGAGGAGGGAAGAGAATCAGCACCATACAATaGGGGCAAGCAGGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: WLCQHYLELEVQTGGGKRISTIQ*GQAGWG
Trigger: TCCCCACCCTGCTTGCCCCCATTGTATGGTGCTGAT...TCTCTTCCCTCCTCCAGTCTGAACTTCTAACTCAAGGTAATGTTGGCATAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535988.3
ENST00000540782.1
CDS-3UTR CCA 90 bp CACACAAGCCTCATCTTTCTCTGCTGCATAGTGGAGGGCTGTTCGGTTATACCCATCAGGCAGGAAAGCTaGACCAGCAATCCACTTTCT +
Preference number: 4 (lower is better)
Translates to: HTSLIFLCCIVEGCSVIPIRQES*TSNPLS
Trigger: AGAAAGTGGATTGCTGGTCCAGCTTTCCTGCCTGAT...GGGTATAACCGAACAGCCCTCCACTATGCAGCAGAGAAAGATGAGGCTTGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539464.5
ENST00000539865.5
ENST00000540143.5
CDS-3UTR CCA 90 bp GTATCTCTGTTGCCATCCAAAGCATTGGGGTTTGCACCATACTCCAATAGGACCCTCCAAACGAATTGCTaGGCTGAGGTGGGGGTTGAA +
Preference number: 4 (lower is better)
Translates to: VSLLPSKALGFAPYSNRTLQTNC*AEVGVE
Trigger: TTCAACCCCCACCTCAGCCCAGCAATTCGTTTGGAG...GGTCCTATTGGAGTATGGTGCAAACCCCAATGCTTTGGATGGCAACAGAGATAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000535055.5
ENST00000539528.5
ENST00000540143.5
CDS-3UTR CCA 90 bp TGCCAACATTACCTTGAGTTAGAAGTTCAGACTGGAGGAGGGAAGAGATGGAGGCTCCAAACGAATTGCTaGGCTGAGGTGGGGGTTGAA +
Preference number: 4 (lower is better)
Translates to: CQHYLELEVQTGGGKRWRLQTNC*AEVGVE
Trigger: TTCAACCCCCACCTCAGCCCAGCAATTCGTTTGGAG...CCTCCATCTCTTCCCTCCTCCAGTCTGAACTTCTAACTCAAGGTAATGTTGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540782.1
CDS-3UTR TCA 90 bp GTCATCCAGCCCAGTTCTGGATCTGCACCATTTGAGGTTATAGTATCTTCATCTTGTAATCCAGGGCATTaGCAGAGGCCCCGCTCTCTA +
Preference number: 4 (lower is better)
Translates to: VIQPSSGSAPFEVIVSSSCNPGH*QRPRSL
Trigger: TAGAGAGCGGGGCCTCTGTCAATGCCCTGGATTACA...AGATGAAGATACTATAACCTCAAATGGTGCAGATCCAGAACTGGGCTGGATGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
CDS-3UTR TCA 90 bp GGTAGATGGACCATCACAAAAGGAGCTCTTACATGCTTTTCCCACTCCCATCCCACTTTCCATTGGGAATaGAGACCCATGGGAAAAGGC +
Preference number: 4 (lower is better)
Translates to: GRWTITKGALTCFSHSHPTFHWE*RPMGKG
Trigger: GCCTTTTCCCATGGGTCTTCATTCCCAATGGAAAGT...GGGATGGGAGTGGGAAAAGCATGTAAGAGCTCCTTTTGTGATGGTCCATCTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
CDS-3UTR TCA 90 bp TGGAGGGCTGTTCGGTTATACCCATCCAGGGCATTCACCTTTGCTATGCAGTGCATAAAGATGAAGATATaGCAGGAGCTCGGCTCCTTT +
Preference number: 4 (lower is better)
Translates to: WRAVRLYPSRAFTFAMQCIKMKI*QELGSF
Trigger: AAAGGAGCCGAGCTCCTGTCATATCTTCATCTTTAT...GCACTGCATAGCAAAGGTGAATGCCCTGGATGGGTATAACCGAACAGCCCTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536071.5
CDS-3UTR GCA 90 bp TTTTTGTTGGGTTGTTTGGTTTGGGAAGGGGAGGTGCTATGGAGGTTATTGTTGTCCAAACTGCCGAATTaGTGGGCTGAGGTGGGGGTT +
Preference number: 4 (lower is better)
Translates to: FLLGCLVWEGEVLWRLLLSKLPN*WAEVGV
Trigger: AACCCCCACCTCAGCCCAGCAATTCGGCAGTTTGGA...CAACAATAACCTCCATAGCACCTCCCCTTCCCAAACCAAACAACCCAACAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000317697.8
CDS-3UTR GCA 90 bp TATTGGCTATGCCAACATTACCTTGAGTTAGAAGTTCAGACTGGAGGAGGGAAGTCCAAACTGCCGAATTaGTGGGCTGAGGTGGGGGTT +
Preference number: 4 (lower is better)
Translates to: YWLCQHYLELEVQTGGGKSKLPN*WAEVGV
Trigger: AACCCCCACCTCAGCCCAGCAATTCGGCAGTTTGGA...CTTCCCTCCTCCAGTCTGAACTTCTAACTCAAGGTAATGTTGGCATAGCCAATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535988.3
CDS-3UTR GCA 90 bp ACAAGCCTCATCTTTCTCTGCTGCATAGTGGAGGGCTGTTCGGTTATACCCATCCTCAAGGTGTTCACATaGTCCAAACTGCCGAATTGC +
Preference number: 4 (lower is better)
Translates to: TSLIFLCCIVEGCSVIPILKVFT*SKLPNC
Trigger: GCAATTCGGCAGTTTGGAGCATGTGAACACCTTGAG...GATGGGTATAACCGAACAGCCCTCCACTATGCAGCAGAGAAAGATGAGGCTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000536071.5
ENST00000536953.5
ENST00000539464.5
ENST00000539865.5
CDS-3UTR GCA 90 bp GGATTCTTCTGGACCGTTAACCACGTCCCCAAAGGAAAACCACACACACATTATAGTGCAGTTCACATCTaGTCCCCCTCTGATGAGGTC +
Preference number: 4 (lower is better)
Translates to: GFFWTVNHVPKGKPHTHYSAVHI*SPSDEV
Trigger: GACCTCATCAGAGGGGGAGCAGATGTGAACTGCACT...ATAATGTGTGTGTGGTTTTCCTTTGGGGACGTGGTTAACGGTCCAGAAGAATCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
CDS-3UTR GCA 90 bp GTTAAGGAGAAGAAAGAAAGGCAGAGTATCAGCACCATACAATGGGGGCAAGCATCAGTGTGCCATGAGTaGAGTTCACATCTGCTCCCC +
Preference number: 4 (lower is better)
Translates to: VKEKKERQSISTIQWGQASVCHE*SSHLLP
Trigger: GGGGAGCAGATGTGAACTGCACTCATGGCACACTGA...TGCTTGCCCCCATTGTATGGTGCTGATACTCTGCCTTTCTTTCTTCTCCTTAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000535988.3
ENST00000540782.1
CDS-3UTR GCA 90 bp TATCTCTGTTGCCATCCAAAGCATTGGGGTTTGCACCATACTCCAATAGGACCTACCATACAGGCACAGTaGAAGGGCTTCAGTGTGCCA +
Preference number: 4 (lower is better)
Translates to: YLCCHPKHWGLHHTPIGPTIQAQ*KGFSVP
Trigger: TGGCACACTGAAGCCCTTGCACTGTGCCTGTATGGT...AGGTCCTATTGGAGTATGGTGCAAACCCCAATGCTTTGGATGGCAACAGAGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535055.5
ENST00000536071.5
ENST00000536953.5
ENST00000539528.5
ENST00000539865.5
ENST00000540143.5
CDS-3UTR GCA 90 bp CACCATACTCCAATAGGACCTCCACACAAGCCTCATCTTTCTCTGCTGCATAGTCTCATCTTTCTCTGCTaGATAGTGGAGGGCTGTTCG +
Preference number: 4 (lower is better)
Translates to: HHTPIGPPHKPHLSLLHSLIFLC*IVEGCS
Trigger: CGAACAGCCCTCCACTATGCAGCAGAGAAAGATGAG...ACTATGCAGCAGAGAAAGATGAGGCTTGTGTGGAGGTCCTATTGGAGTATGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000535055.5
ENST00000536071.5
ENST00000536953.5
ENST00000539528.5
ENST00000539865.5
ENST00000540143.5
CDS-3UTR GCA 90 bp TTTGCACCATACTCCAATAGGACCTCCACACAAGCCTCATCTTTCTCTGCTGCACTCATCTTTCTCTGCTaGATAGTGGAGGGCTGTTCG +
Preference number: 4 (lower is better)
Translates to: FAPYSNRTSTQASSFSAALIFLC*IVEGCS
Trigger: CGAACAGCCCTCCACTATGCAGCAGAGAAAGATGAG...TGCAGCAGAGAAAGATGAGGCTTGTGTGGAGGTCCTATTGGAGTATGGTGCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000535055.5
ENST00000536071.5
ENST00000536953.5
ENST00000539528.5
ENST00000539865.5
ENST00000540143.5
CDS-3UTR GCA 90 bp AGTGGGGTATCTCTGTTGCCATCCAAAGCATTGGGGTTTGCACCATACTCCAATAGCCTCATCTTTCTCTaGTGCATAGTGGAGGGCTGT +
Preference number: 4 (lower is better)
Translates to: SGVSLLPSKALGFAPYSNSLIFL*CIVEGC
Trigger: ACAGCCCTCCACTATGCAGCAGAGAAAGATGAGGCT...ATTGGAGTATGGTGCAAACCCCAATGCTTTGGATGGCAACAGAGATACCCCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000535055.5
ENST00000536071.5
ENST00000536953.5
ENST00000539528.5
ENST00000539865.5
ENST00000540143.5
CDS-3UTR GCA 90 bp ACCTCGGCTCCTTTTTCCAGAAGTAACTCCACACAGTCAGCATCTGACACCATAAGCCTCATCTTTCTCTaGTGCATAGTGGAGGGCTGT +
Preference number: 4 (lower is better)
Translates to: TSAPFSRSNSTQSASDTISLIFL*CIVEGC
Trigger: ACAGCCCTCCACTATGCAGCAGAGAAAGATGAGGCT...TATGGTGTCAGATGCTGACTGTGTGGAGTTACTTCTGGAAAAAGGAGCCGAGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000539464.5
ENST00000539865.5
ENST00000540143.5
CDS-3UTR GCA 90 bp CTTTCTCTGCTGCATAGTGGAGGGCTGTTCGGTTATACCCATCCAGGGCATTCAATTGTTCTTAAAGGCTaGCCAGTGAAGTGGGGTATC +
Preference number: 4 (lower is better)
Translates to: LSLLHSGGLFGYTHPGHSIVLKG*PVKWGI
Trigger: GATACCCCACTTCACTGGGCAGCCTTTAAGAACAAT...TGAATGCCCTGGATGGGTATAACCGAACAGCCCTCCACTATGCAGCAGAGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535055.5
ENST00000536071.5
ENST00000536953.5
ENST00000539528.5
ENST00000539865.5
CDS-3UTR GCA 90 bp ACTCCAATAGGACCTCCACACAAGCCTCATCTTTCTCTGCTGCATAGTGGAGGGATTGTTCTTAAAGGCTaGCCAGTGAAGTGGGGTATC +
Preference number: 4 (lower is better)
Translates to: TPIGPPHKPHLSLLHSGGIVLKG*PVKWGI
Trigger: GATACCCCACTTCACTGGGCAGCCTTTAAGAACAAT...CCCTCCACTATGCAGCAGAGAAAGATGAGGCTTGTGTGGAGGTCCTATTGGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535055.5
ENST00000536071.5
ENST00000536953.5
ENST00000539528.5
ENST00000539865.5
CDS-3UTR GCA 90 bp AAGAGGCAAAGACTGCTGTTTCCTTTGATGAGGGGAAAGAGGTCCAGTCCCTTCGATGACTCTGACCTCTaGGCCATAATCCAGAAGGAT +
Preference number: 4 (lower is better)
Translates to: KRQRLLFPLMRGKRSSPFDDSDL*AIIQKD
Trigger: ATCCTTCTGGATTATGGCGCAGAGGTCAGAGTCATC...GAAGGGACTGGACCTCTTTCCCCTCATCAAAGGAAACAGCAGTCTTTGCCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
CDS-3UTR GCA 90 bp GGGGTATCTCTGTTGCCATCCAAAGCATTGGGGTTTGCACCATACTCCAATAGGGATGACTCTGACCTCTaGGCCATAATCCAGAAGGAT +
Preference number: 4 (lower is better)
Translates to: GVSLLPSKALGFAPYSNRDDSDL*AIIQKD
Trigger: ATCCTTCTGGATTATGGCGCAGAGGTCAGAGTCATC...CCTATTGGAGTATGGTGCAAACCCCAATGCTTTGGATGGCAACAGAGATACCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536953.5
ENST00000539528.5
CDS-3UTR GCA 90 bp CTCTGTTGCCATCCAAAGCATTGGGGTTTGCACCATACTCCAATAGGACCTCCAGATGACTCTGACCTCTaGGCCATAATCCAGAAGGAT +
Preference number: 4 (lower is better)
Translates to: LCCHPKHWGLHHTPIGPPDDSDL*AIIQKD
Trigger: ATCCTTCTGGATTATGGCGCAGAGGTCAGAGTCATC...TGGAGGTCCTATTGGAGTATGGTGCAAACCCCAATGCTTTGGATGGCAACAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536953.5
ENST00000539528.5
CDS-3UTR GCA 90 bp TTTTTGTTGGGTTGTTTGGTTTGGGAAGGGGAGGTGCTATGGAGGTTATTGTTGTGGAAGGCCCTTCACTaGATCGGGGAGATACTGGAG +
Preference number: 4 (lower is better)
Translates to: FLLGCLVWEGEVLWRLLLWKALH*IGEILE
Trigger: CTCCAGTATCTCCCCGATGCAGTGAAGGGCCTTCCA...CAACAATAACCTCCATAGCACCTCCCCTTCCCAAACCAAACAACCCAACAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
CDS-3UTR GCA 90 bp GGATTCTTCTGGACCGTTAACCACGTCCCCAAAGGAAAACCACACACACATTATCTGCCTGCACGATGGTaGAAACATCTTCTCCGGCTA +
Preference number: 4 (lower is better)
Translates to: GFFWTVNHVPKGKPHTHYLPARW*KHLLRL
Trigger: TAGCCGGAGAAGATGTTTGCACCATCGTGCAGGCAG...ATAATGTGTGTGTGGTTTTCCTTTGGGGACGTGGTTAACGGTCCAGAAGAATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
CDS-3UTR GCA 90 bp GGGTATCTCTGTTGCCATCCAAAGCATTGGGGTTTGCACCATACTCCAATAGGATCAGTGTGCCATGAGTaGAGTTCACATCTGCTCCCT +
Preference number: 4 (lower is better)
Translates to: GYLCCHPKHWGLHHTPIGSVCHE*SSHLLP
Trigger: AGGGAGCAGATGTGAACTGCACTCATGGCACACTGA...TCCTATTGGAGTATGGTGCAAACCCCAATGCTTTGGATGGCAACAGAGATACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539865.5
ENST00000540143.5
CDS-3UTR GCA 90 bp CTCCACACAAGCCTCATCTTTCTCTGCTGCATAGTGGAGGGCTGTTCGGTTATAAGTGCAGTTCACATCTaGTCCCTGGACATCACTGAA +
Preference number: 4 (lower is better)
Translates to: LHTSLIFLCCIVEGCSVISAVHI*SLDITE
Trigger: TTCAGTGATGTCCAGGGAGCAGATGTGAACTGCACT...TATAACCGAACAGCCCTCCACTATGCAGCAGAGAAAGATGAGGCTTGTGTGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539464.5
ENST00000540143.5
CDS-3UTR GCA 90 bp TGGCTATGCCAACATTACCTTGAGTTAGAAGTTCAGACTGGAGGAGGGAAGAGAATGCTCCAAACGAATTaGTGGGCTGAGGTGGGGGTT +
Preference number: 4 (lower is better)
Translates to: WLCQHYLELEVQTGGGKRMLQTN*WAEVGV
Trigger: AACCCCCACCTCAGCCCAGCAATTCGTTTGGAGCAT...TCTCTTCCCTCCTCCAGTCTGAACTTCTAACTCAAGGTAATGTTGGCATAGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540782.1
CDS-3UTR GCA 90 bp CACAAGCCTCATCTTTCTCTGCTGCATAGTGGAGGGCTGTTCGGTTATACCCATCTCAAGGTGTTCACATaGTCCAAACGAATTGCTGGG +
Preference number: 4 (lower is better)
Translates to: HKPHLSLLHSGGLFGYTHLKVFT*SKRIAG
Trigger: CCCAGCAATTCGTTTGGAGCATGTGAACACCTTGAG...ATGGGTATAACCGAACAGCCCTCCACTATGCAGCAGAGAAAGATGAGGCTTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535055.5
ENST00000539528.5
ENST00000540143.5
CDS-3UTR GCA 90 bp GGACAGCAGCAAAGAAGCTTGCATGGTTACCCACTACCTTTGCTATGCAGTGCTCTCAAGGTGTTCACATaGTCCAAACGAATTGCTGGG +
Preference number: 4 (lower is better)
Translates to: GQQQRSLHGYPLPLLCSALKVFT*SKRIAG
Trigger: CCCAGCAATTCGTTTGGAGCATGTGAACACCTTGAG...AGCACTGCATAGCAAAGGTAGTGGGTAACCATGCAAGCTTCTTTGCTGCTGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539528.5
CDS-3UTR GCA 90 bp AAGCCTCATCTTTCTCTGCTGCATAGTGGAGGGCTGTTCGGTTATACCCATCCACATTCACCTTTGCTATaGAGTGCTCTGAACAGGAGG +
Preference number: 4 (lower is better)
Translates to: KPHLSLLHSGGLFGYTHPHSPLL*SALNRR
Trigger: CCTCCTGTTCAGAGCACTGCATAGCAAAGGTGAATG...TGGATGGGTATAACCGAACAGCCCTCCACTATGCAGCAGAGAAAGATGAGGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535055.5
ENST00000536071.5
ENST00000536953.5
CDS-3UTR GCA 90 bp CATACTCCAATAGGACCTCCACACAAGCCTCATCTTTCTCTGCTGCATAGTGGACCACTACCTTTGCTATaGAGTGCTCTGAACAGGAGG +
Preference number: 4 (lower is better)
Translates to: HTPIGPPHKPHLSLLHSGPLPLL*SALNRR
Trigger: CCTCCTGTTCAGAGCACTGCATAGCAAAGGTAGTGG...TCCACTATGCAGCAGAGAAAGATGAGGCTTGTGTGGAGGTCCTATTGGAGTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539528.5
CDS-3UTR CCA 90 bp TTCAGAGCTACTGTAGCCCTTGGGCACAACCAACAGAAAGAGGCAAAGACTGCTGTGGGAAGGAACGGATaGCAGCAATTGTTCGGATTA +
Preference number: 4 (lower is better)
Translates to: FRATVALGHNQQKEAKTAVGRNG*QQLFGL
Trigger: TAATCCGAACAATTGCTGCCATCCGTTCCTTCCCAC...AGCAGTCTTTGCCTCTTTCTGTTGGTTGTGCCCAAGGGCTACAGTAGCTCTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
CDS-3UTR CCA 90 bp CATCCAAAGCATTGGGGTTTGCACCATACTCCAATAGGACCTCCACACAAGCCTGTGGGAAGGAACGGATaGCAGCAATTGTTCGGATTA +
Preference number: 4 (lower is better)
Translates to: HPKHWGLHHTPIGPPHKPVGRNG*QQLFGL
Trigger: TAATCCGAACAATTGCTGCCATCCGTTCCTTCCCAC...AGGCTTGTGTGGAGGTCCTATTGGAGTATGGTGCAAACCCCAATGCTTTGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535055.5
ENST00000536071.5
ENST00000536953.5
ENST00000539528.5
ENST00000539865.5
ENST00000540143.5
CDS-3UTR CCA 90 bp CACAAGCCTCATCTTTCTCTGCTGCATAGTGGAGGGCTGTTCGGTTATACCCATGTGGGAAGGAACGGATaGCAGCAATTGTTCGGATTA +
Preference number: 4 (lower is better)
Translates to: HKPHLSLLHSGGLFGYTHVGRNG*QQLFGL
Trigger: TAATCCGAACAATTGCTGCCATCCGTTCCTTCCCAC...ATGGGTATAACCGAACAGCCCTCCACTATGCAGCAGAGAAAGATGAGGCTTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000535055.5
ENST00000536071.5
ENST00000536953.5
ENST00000539464.5
ENST00000539528.5
ENST00000539865.5
ENST00000540143.5
CDS-3UTR CCA 90 bp AAGAGGCAAAGACTGCTGTTTCCTTTGATGAGGGGAAAGAGGTCCAGTCCCTTCCTCTACATTATCATGTaGGAAGGAACGGATGGCAGC +
Preference number: 4 (lower is better)
Translates to: KRQRLLFPLMRGKRSSPFLYIIM*EGTDGS
Trigger: GCTGCCATCCGTTCCTTCCCACATGATAATGTAGAG...GAAGGGACTGGACCTCTTTCCCCTCATCAAAGGAAACAGCAGTCTTTGCCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
CDS-3UTR CCA 90 bp TGGGGTTTGCACCATACTCCAATAGGACCTCCACACAAGCCTCATCTTTCTCTGCTCTACATTATCATGTaGGAAGGAACGGATGGCAGC +
Preference number: 4 (lower is better)
Translates to: WGLHHTPIGPPHKPHLSLLYIIM*EGTDGS
Trigger: GCTGCCATCCGTTCCTTCCCACATGATAATGTAGAG...CAGAGAAAGATGAGGCTTGTGTGGAGGTCCTATTGGAGTATGGTGCAAACCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535055.5
ENST00000536071.5
ENST00000536953.5
ENST00000539528.5
ENST00000539865.5
ENST00000540143.5
CDS-3UTR CCA 90 bp GGTTTGCACCATACTCCAATAGGACCTCCACACAAGCCTCATCTTTCTCTGCTGCTCTACATTATCATGTaGGAAGGAACGGATGGCAGC +
Preference number: 4 (lower is better)
Translates to: GLHHTPIGPPHKPHLSLLLYIIM*EGTDGS
Trigger: GCTGCCATCCGTTCCTTCCCACATGATAATGTAGAG...CAGCAGAGAAAGATGAGGCTTGTGTGGAGGTCCTATTGGAGTATGGTGCAAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000535055.5
ENST00000536071.5
ENST00000536953.5
ENST00000539528.5
ENST00000539865.5
ENST00000540143.5
CDS-3UTR CCA 90 bp ACTCTCAAGATTTCCCTTCATGGCAGCCCAGCTGAGCGGTGTATCATTGTTGTACGGGAGATGGGTGTCTaGCCTATTAGGTTGATGACT +
Preference number: 4 (lower is better)
Translates to: TLKISLHGSPAERCIIVVREMGV*PIRLMT
Trigger: AGTCATCAACCTAATAGGCCAGACACCCATCTCCCG...TACAACAATGATACACCGCTCAGCTGGGCTGCCATGAAGGGAAATCTTGAGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536953.5
ENST00000539528.5
CDS-3UTR CCA 90 bp GGTAGATGGACCATCACAAAAGGAGCTCTTACATGCTTTTCCCACTCCCATCCCCCACCTCTCGTGGCATaGTGCCATTTTTCCTCAATT +
Preference number: 4 (lower is better)
Translates to: GRWTITKGALTCFSHSHPPPLVA*CHFSSI
Trigger: AATTGAGGAAAAATGGCACCATGCCACGAGAGGTGG...GGGATGGGAGTGGGAAAAGCATGTAAGAGCTCCTTTTGTGATGGTCCATCTACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
CDS-3UTR CCA 90 bp GGATTCTTCTGGACCGTTAACCACGTCCCCAAAGGAAAACCACACACACATTATTCTGGCCACCTCTCGTaGCATGGTGCCATTTTTCCT +
Preference number: 4 (lower is better)
Translates to: GFFWTVNHVPKGKPHTHYSGHLS*HGAIFP
Trigger: AGGAAAAATGGCACCATGCCACGAGAGGTGGCCAGA...ATAATGTGTGTGTGGTTTTCCTTTGGGGACGTGGTTAACGGTCCAGAAGAATCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
CDS-3UTR CCA 90 bp AAGAGGCAAAGACTGCTGTTTCCTTTGATGAGGGGAAAGAGGTCCAGTCCCTTCTTTTGTTGGGTTGTTTaGTTTGGGAAGGGGAGGTGC +
Preference number: 4 (lower is better)
Translates to: KRQRLLFPLMRGKRSSPFFCWVV*FGKGRC
Trigger: GCACCTCCCCTTCCCAAACCAAACAACCCAACAAAA...GAAGGGACTGGACCTCTTTCCCCTCATCAAAGGAAACAGCAGTCTTTGCCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
CDS-3UTR CCA 90 bp TTCAGAGCTACTGTAGCCCTTGGGCACAACCAACAGAAAGAGGCAAAGACTGCTGTGAGCCACCATGGCTaGCCTAAAATGCTTTCTAGA +
Preference number: 4 (lower is better)
Translates to: FRATVALGHNQQKEAKTAVSHHG*PKMLSR
Trigger: TCTAGAAAGCATTTTAGGCCAGCCATGGTGGCTCAC...AGCAGTCTTTGCCTCTTTCTGTTGGTTGTGCCCAAGGGCTACAGTAGCTCTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
CDS-3UTR CCA 90 bp TTGGGCACAACCAACAGAAAGAGGCAAAGACTGCTGTTTCCTTTGATGAGGGGAATAACTCCTCCCTGCTaGAACACACACCGTAGGTGT +
Preference number: 4 (lower is better)
Translates to: LGTTNRKRQRLLFPLMRGITPPC*NTHRRC
Trigger: ACACCTACGGTGTGTGTTCCAGCAGGGAGGAGTTAT...TCCCCTCATCAAAGGAAACAGCAGTCTTTGCCTCTTTCTGTTGGTTGTGCCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
CDS-3UTR CCA 90 bp CATCCAGGGCATTCACCTCGGCTCCTTTTTCCAGAAGTAACTCCACACAGTCAGTTCACATCTGCTCCCTaGACATCACTGAAGACAATC +
Preference number: 4 (lower is better)
Translates to: HPGHSPRLLFPEVTPHSQFTSAP*TSLKTI
Trigger: GATTGTCTTCAGTGATGTCCAGGGAGCAGATGTGAA...CTGACTGTGTGGAGTTACTTCTGGAAAAAGGAGCCGAGGTGAATGCCCTGGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000539464.5
ENST00000540143.5
3UTR CAA 72 bp ACTACTGAGAGGAAGACAGGACAGCAGCAAAGAAGCTaGCATGGTTACCCACTACCTTTGCTATGCAGTGCT +
Preference number: 4 (lower is better)
Translates to: TTERKTGQQQRS*HGYPLPLLCSA
Trigger: AGCACTGCATAGCAAAGGTAGTGGGTAACCATGCAAGCTTCTTTGCTGCTGTCCTGTCTTCCTCTCAGTAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539528.5
CDS-3UTR TCA 90 bp TTTCCCACTCCCATCCCAAGTCCACCCTCCCACCAATTGTATTGTATAAATCAATCATGGCAGCCCAGCTaGGCGGTGTATCATTGTTGT +
Preference number: 4 (lower is better)
Translates to: FPTPIPSPPSHQLYCINQSWQPS*AVYHCC
Trigger: ACAACAATGATACACCGCTCAGCTGGGCTGCCATGA...TTGATTTATACAATACAATTGGTGGGAGGGTGGACTTGGGATGGGAGTGGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
CDS-3UTR TCA 90 bp AAGAGGCAAAGACTGCTGTTTCCTTTGATGAGGGGAAAGAGGTCCAGTCCCTTCAATCCAGAAGGATGCTaGCACTCTCAAGATTTCCCT +
Preference number: 4 (lower is better)
Translates to: KRQRLLFPLMRGKRSSPFNPEGC*HSQDFP
Trigger: AGGGAAATCTTGAGAGTGTCAGCATCCTTCTGGATT...GAAGGGACTGGACCTCTTTCCCCTCATCAAAGGAAACAGCAGTCTTTGCCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
CDS-3UTR TCA 90 bp AAGCCTCATCTTTCTCTGCTGCATAGTGGAGGGCTGTTCGGTTATACCCATCCAAATCCAGAAGGATGCTaGCACTCTCAAGATTTCCCT +
Preference number: 4 (lower is better)
Translates to: KPHLSLLHSGGLFGYTHPNPEGC*HSQDFP
Trigger: AGGGAAATCTTGAGAGTGTCAGCATCCTTCTGGATT...TGGATGGGTATAACCGAACAGCCCTCCACTATGCAGCAGAGAAAGATGAGGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536953.5
ENST00000539528.5
CDS-3UTR GCA 90 bp TTGGGCACAACCAACAGAAAGAGGCAAAGACTGCTGTTTCCTTTGATGAGGGGACTCAAGGTGTTCACATaGTCCAAACTGCCGAATTGC +
Preference number: 4 (lower is better)
Translates to: LGTTNRKRQRLLFPLMRGLKVFT*SKLPNC
Trigger: GCAATTCGGCAGTTTGGAGCATGTGAACACCTTGAG...TCCCCTCATCAAAGGAAACAGCAGTCTTTGCCTCTTTCTGTTGGTTGTGCCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317697.8
CDS-3UTR GCA 90 bp AGTGGGGTATCTCTGTTGCCATCCAAAGCATTGGGGTTTGCACCATACTCCAATCTCAAGGTGTTCACATaGTCCAAACTGCCGAATTGC +
Preference number: 4 (lower is better)
Translates to: SGVSLLPSKALGFAPYSNLKVFT*SKLPNC
Trigger: GCAATTCGGCAGTTTGGAGCATGTGAACACCTTGAG...ATTGGAGTATGGTGCAAACCCCAATGCTTTGGATGGCAACAGAGATACCCCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536071.5
ENST00000536953.5
ENST00000539865.5
CDS-3UTR GCA 90 bp TATTGGCTATGCCAACATTACCTTGAGTTAGAAGTTCAGACTGGAGGAGGGAAGTCAGTGTGCCATGAGTaGAGTTCACATCTGCTCCCC +
Preference number: 4 (lower is better)
Translates to: YWLCQHYLELEVQTGGGKSVCHE*SSHLLP
Trigger: GGGGAGCAGATGTGAACTGCACTCATGGCACACTGA...CTTCCCTCCTCCAGTCTGAACTTCTAACTCAAGGTAATGTTGGCATAGCCAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535988.3
ENST00000540782.1
CDS-3UTR GCA 90 bp GTTAAGGAGAAGAAAGAAAGGCAGAGTATCAGCACCATACAATGGGGGCAAGCAGCAAGGGCTTCAGTGTaGCATGAGTGCAGTTCACAT +
Preference number: 4 (lower is better)
Translates to: VKEKKERQSISTIQWGQAARASV*HECSSH
Trigger: ATGTGAACTGCACTCATGGCACACTGAAGCCCTTGC...TGCTTGCCCCCATTGTATGGTGCTGATACTCTGCCTTTCTTTCTTCTCCTTAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000535988.3
ENST00000540782.1
CDS-3UTR GCA 90 bp GGATTCTTCTGGACCGTTAACCACGTCCCCAAAGGAAAACCACACACACATTATCTCATCTTTCTCTGCTaGATAGTGGAGGGCTGTTCG +
Preference number: 4 (lower is better)
Translates to: GFFWTVNHVPKGKPHTHYLIFLC*IVEGCS
Trigger: CGAACAGCCCTCCACTATGCAGCAGAGAAAGATGAG...ATAATGTGTGTGTGGTTTTCCTTTGGGGACGTGGTTAACGGTCCAGAAGAATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
CDS-3UTR GCA 90 bp GGATTCTTCTGGACCGTTAACCACGTCCCCAAAGGAAAACCACACACACATTATGTGGGGTATCTCTGTTaGCATCCAAAGCATTGGGGT +
Preference number: 4 (lower is better)
Translates to: GFFWTVNHVPKGKPHTHYVGYLC*HPKHWG
Trigger: ACCCCAATGCTTTGGATGGCAACAGAGATACCCCAC...ATAATGTGTGTGTGGTTTTCCTTTGGGGACGTGGTTAACGGTCCAGAAGAATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
CDS-3UTR GCA 90 bp GTCATCCAGCCCAGTTCTGGATCTGCACCATTTGAGGTTATAGTATCTTCATCTCTGCCTGCACGATGGTaGAAACATCTTCTCCGGCTA +
Preference number: 4 (lower is better)
Translates to: VIQPSSGSAPFEVIVSSSLPARW*KHLLRL
Trigger: TAGCCGGAGAAGATGTTTGCACCATCGTGCAGGCAG...AGATGAAGATACTATAACCTCAAATGGTGCAGATCCAGAACTGGGCTGGATGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
CDS-3UTR GCA 90 bp GGTAGATGGACCATCACAAAAGGAGCTCTTACATGCTTTTCCCACTCCCATCCCTTTGGGAAGGGGAGGTaGTATGGAGGTTATTGTTGT +
Preference number: 4 (lower is better)
Translates to: GRWTITKGALTCFSHSHPFGKGR*YGGYCC
Trigger: ACAACAATAACCTCCATAGCACCTCCCCTTCCCAAA...GGGATGGGAGTGGGAAAAGCATGTAAGAGCTCCTTTTGTGATGGTCCATCTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
CDS-3UTR GCA 90 bp CCCATAACTCCTCCCTGCTGGAACACACACCGTAGGTGTAGGAACTGCCTGGGAAGGAAGAGAAAAAGCTaGATTACAAGAAAAGTTCTC +
Preference number: 4 (lower is better)
Translates to: PITPPCWNTHRRCRNCLGRKRKS*ITRKVL
Trigger: GAGAACTTTTCTTGTAATGCAGCTTTTTCTCTTCCT...TCCCAGGCAGTTCCTACACCTACGGTGTGTGTTCCAGCAGGGAGGAGTTATGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
CDS-3UTR GCA 90 bp CATTCACCTCGGCTCCTTTTTCCAGAAGTAACTCCACACAGTCAGCATCTGACAAGTGCAGTTCACATCTaGTCCCTGGACATCACTGAA +
Preference number: 4 (lower is better)
Translates to: HSPRLLFPEVTPHSQHLTSAVHI*SLDITE
Trigger: TTCAGTGATGTCCAGGGAGCAGATGTGAACTGCACT...TGTCAGATGCTGACTGTGTGGAGTTACTTCTGGAAAAAGGAGCCGAGGTGAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000539464.5
ENST00000540143.5
CDS-3UTR GCA 90 bp TTGGGCACAACCAACAGAAAGAGGCAAAGACTGCTGTTTCCTTTGATGAGGGGACTCAAGGTGTTCACATaGTCCAAACGAATTGCTGGG +
Preference number: 4 (lower is better)
Translates to: LGTTNRKRQRLLFPLMRGLKVFT*SKRIAG
Trigger: CCCAGCAATTCGTTTGGAGCATGTGAACACCTTGAG...TCCCCTCATCAAAGGAAACAGCAGTCTTTGCCTCTTTCTGTTGGTTGTGCCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536549.5
CDS-3UTR CCA 90 bp GTCATCCAGCCCAGTTCTGGATCTGCACCATTTGAGGTTATAGTATCTTCATCTAAACTGCCGAATTGCTaGGCTGAGGTGGGGGTTGAA +
Preference number: 4 (lower is better)
Translates to: VIQPSSGSAPFEVIVSSSKLPNC*AEVGVE
Trigger: TTCAACCCCCACCTCAGCCCAGCAATTCGGCAGTTT...AGATGAAGATACTATAACCTCAAATGGTGCAGATCCAGAACTGGGCTGGATGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317697.8
CDS-3UTR CCA 90 bp TTTCCAGAAGTAACTCCACACAGTCAGCATCTGACACCATACAGGCACAGTGCACTCTACATTATCATGTaGGAAGGAACGGATGGCAGC +
Preference number: 4 (lower is better)
Translates to: FPEVTPHSQHLTPYRHSALYIIM*EGTDGS
Trigger: GCTGCCATCCGTTCCTTCCCACATGATAATGTAGAG...TGCACTGTGCCTGTATGGTGTCAGATGCTGACTGTGTGGAGTTACTTCTGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539464.5
ENST00000539865.5
ENST00000540143.5
CDS-3UTR CCA 90 bp CACCATACTCCAATAGGACCTCCACACAAGCCTCATCTTTCTCTGCTGCATAGTCTCTACATTATCATGTaGGAAGGAACGGATGGCAGC +
Preference number: 4 (lower is better)
Translates to: HHTPIGPPHKPHLSLLHSLYIIM*EGTDGS
Trigger: GCTGCCATCCGTTCCTTCCCACATGATAATGTAGAG...ACTATGCAGCAGAGAAAGATGAGGCTTGTGTGGAGGTCCTATTGGAGTATGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000535055.5
ENST00000536071.5
ENST00000536953.5
ENST00000539528.5
ENST00000539865.5
ENST00000540143.5
CDS-3UTR CCA 90 bp ACAGAAGAAGACATCTGTTTTCCAATTAGCTGTGTCAGTAGATTCCATTCATTGGCATCGGGGAGATACTaGAGTCCCAGGCTACGGCGC +
Preference number: 4 (lower is better)
Translates to: TEEDICFPISCVSRFHSLASGRY*SPRLRR
Trigger: GCGCCGTAGCCTGGGACTCCAGTATCTCCCCGATGC...CAATGAATGGAATCTACTGACACAGCTAATTGGAAAACAGATGTCTTCTTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
CDS-3UTR CCA 90 bp GGATTCTTCTGGACCGTTAACCACGTCCCCAAAGGAAAACCACACACACATTATATAACTCCTCCCTGCTaGAACACACACCGTAGGTGT +
Preference number: 4 (lower is better)
Translates to: GFFWTVNHVPKGKPHTHYITPPC*NTHRRC
Trigger: ACACCTACGGTGTGTGTTCCAGCAGGGAGGAGTTAT...ATAATGTGTGTGTGGTTTTCCTTTGGGGACGTGGTTAACGGTCCAGAAGAATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
CDS-3UTR CCA 90 bp TCTCTGTTGCCATCCAAAGCATTGGGGTTTGCACCATACTCCAATAGGACCTCCGCAAAGAAGCTTGCATaGTTACCCACTACCTTTGCT +
Preference number: 4 (lower is better)
Translates to: SLLPSKALGFAPYSNRTSAKKLA*LPTTFA
Trigger: AGCAAAGGTAGTGGGTAACCATGCAAGCTTCTTTGC...GGAGGTCCTATTGGAGTATGGTGCAAACCCCAATGCTTTGGATGGCAACAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539528.5
CDS-3UTR TCA 90 bp CCAATAGGACCTCCACACAAGCCTCATCTTTCTCTGCTGCATAGTGGAGGGCTGAGAGAGTATTTGCTCTaGATGCTCTGCATAATATAC +
Preference number: 4 (lower is better)
Translates to: PIGPPHKPHLSLLHSGGLREYLL*MLCIIY
Trigger: GTATATTATGCAGAGCATTCAGAGCAAATACTCTCT...CAGCCCTCCACTATGCAGCAGAGAAAGATGAGGCTTGTGTGGAGGTCCTATTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000535055.5
ENST00000536071.5
ENST00000536953.5
ENST00000539528.5
ENST00000539865.5
ENST00000540143.5
CDS-3UTR TCA 90 bp AGCCCGCACACACTCAGCATTGTTCTTAAAGGCTGCCCAGTGAAGTGGGGTATCAGAGAGTATTTGCTCTaGATGCTCTGCATAATATAC +
Preference number: 4 (lower is better)
Translates to: SPHTLSIVLKGCPVKWGIREYLL*MLCIIY
Trigger: GTATATTATGCAGAGCATTCAGAGCAAATACTCTCT...GATACCCCACTTCACTGGGCAGCCTTTAAGAACAATGCTGAGTGTGTGCGGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535055.5
ENST00000536953.5
ENST00000539528.5
ENST00000539865.5
CDS-3UTR TCA 90 bp TTTCCCACTCCCATCCCAAGTCCACCCTCCCACCAATTGTATTGTATAAATCAATTAAAGGCTGCCCAGTaGAGTGGGGTATCTCTGTTG +
Preference number: 4 (lower is better)
Translates to: FPTPIPSPPSHQLYCINQLKAAQ*SGVSLL
Trigger: CAACAGAGATACCCCACTTCACTGGGCAGCCTTTAA...TTGATTTATACAATACAATTGGTGGGAGGGTGGACTTGGGATGGGAGTGGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
CDS-3UTR TCA 90 bp TTGCACCATACTCCAATAGGACCTCCACACAAGCCTCATCTTTCTCTGCTGCATAATCCAGAAGGATGCTaGCACTCTCAAGATTTCCCT +
Preference number: 4 (lower is better)
Translates to: LHHTPIGPPHKPHLSLLHNPEGC*HSQDFP
Trigger: AGGGAAATCTTGAGAGTGTCAGCATCCTTCTGGATT...ATGCAGCAGAGAAAGATGAGGCTTGTGTGGAGGTCCTATTGGAGTATGGTGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536953.5
ENST00000539528.5
CDS-3UTR TCA 90 bp GGATTCTTCTGGACCGTTAACCACGTCCCCAAAGGAAAACCACACACACATTATACTTTCCATTGGGAATaGAGACCCATGGGAAAAGGC +
Preference number: 4 (lower is better)
Translates to: GFFWTVNHVPKGKPHTHYTFHWE*RPMGKG
Trigger: GCCTTTTCCCATGGGTCTTCATTCCCAATGGAAAGT...ATAATGTGTGTGTGGTTTTCCTTTGGGGACGTGGTTAACGGTCCAGAAGAATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
CDS-3UTR GCA 90 bp TTTTTGTTGGGTTGTTTGGTTTGGGAAGGGGAGGTGCTATGGAGGTTATTGTTGGCAAGGGCTTCAGTGTaGCATGAGTGCAGTTCACAT +
Preference number: 4 (lower is better)
Translates to: FLLGCLVWEGEVLWRLLLARASV*HECSSH
Trigger: ATGTGAACTGCACTCATGGCACACTGAAGCCCTTGC...CAACAATAACCTCCATAGCACCTCCCCTTCCCAAACCAAACAACCCAACAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
CDS-3UTR GCA 90 bp TATTGGCTATGCCAACATTACCTTGAGTTAGAAGTTCAGACTGGAGGAGGGAAGGCAAGGGCTTCAGTGTaGCATGAGTGCAGTTCACAT +
Preference number: 4 (lower is better)
Translates to: YWLCQHYLELEVQTGGGKARASV*HECSSH
Trigger: ATGTGAACTGCACTCATGGCACACTGAAGCCCTTGC...CTTCCCTCCTCCAGTCTGAACTTCTAACTCAAGGTAATGTTGGCATAGCCAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535988.3
ENST00000540782.1
CDS-3UTR GCA 90 bp TTTTTGTTGGGTTGTTTGGTTTGGGAAGGGGAGGTGCTATGGAGGTTATTGTTGCTCATCTTTCTCTGCTaGATAGTGGAGGGCTGTTCG +
Preference number: 4 (lower is better)
Translates to: FLLGCLVWEGEVLWRLLLLIFLC*IVEGCS
Trigger: CGAACAGCCCTCCACTATGCAGCAGAGAAAGATGAG...CAACAATAACCTCCATAGCACCTCCCCTTCCCAAACCAAACAACCCAACAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
CDS-3UTR GCA 90 bp ACTATTACAGTAGACAGACTACTGAGAGGAAGACAGGACAGCAGCAAAGAAGCTCTCATCTTTCTCTGCTaGATAGTGGAGGGCTGTTCG +
Preference number: 4 (lower is better)
Translates to: TITVDRLLRGRQDSSKEALIFLC*IVEGCS
Trigger: CGAACAGCCCTCCACTATGCAGCAGAGAAAGATGAG...AGCTTCTTTGCTGCTGTCCTGTCTTCCTCTCAGTAGTCTGTCTACTGTAATAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539528.5
CDS-3UTR GCA 90 bp TTGCACCATACTCCAATAGGACCTCCACACAAGCCTCATCTTTCTCTGCTGCATATTGTTCTTAAAGGCTaGCCAGTGAAGTGGGGTATC +
Preference number: 4 (lower is better)
Translates to: LHHTPIGPPHKPHLSLLHIVLKG*PVKWGI
Trigger: GATACCCCACTTCACTGGGCAGCCTTTAAGAACAAT...ATGCAGCAGAGAAAGATGAGGCTTGTGTGGAGGTCCTATTGGAGTATGGTGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535055.5
ENST00000536071.5
ENST00000536953.5
ENST00000539528.5
ENST00000539865.5
CDS-3UTR GCA 90 bp TCTGACCTCTGCGCCATAATCCAGAAGGATGCTGACACTCTCAAGATTTCCCTTATTGTTCTTAAAGGCTaGCCAGTGAAGTGGGGTATC +
Preference number: 4 (lower is better)
Translates to: SDLCAIIQKDADTLKISLIVLKG*PVKWGI
Trigger: GATACCCCACTTCACTGGGCAGCCTTTAAGAACAAT...AAGGGAAATCTTGAGAGTGTCAGCATCCTTCTGGATTATGGCGCAGAGGTCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536953.5
ENST00000539528.5
CDS-3UTR GCA 90 bp GGAAGACAGGACAGCAGCAAAGAAGCTTGCATGGTTACCCACTACCTTTGCTATATTGTTCTTAAAGGCTaGCCAGTGAAGTGGGGTATC +
Preference number: 4 (lower is better)
Translates to: GRQDSSKEACMVTHYLCYIVLKG*PVKWGI
Trigger: GATACCCCACTTCACTGGGCAGCCTTTAAGAACAAT...ATAGCAAAGGTAGTGGGTAACCATGCAAGCTTCTTTGCTGCTGTCCTGTCTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539528.5
CDS-3UTR GCA 90 bp AGTGAACTTTCCATTGGGAATGAAGACCCATGGGAAAAGGCAGCCCAGCCCATATTTTTGAGACAGTTTTaGTCTTGTTGTCCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: SELSIGNEDPWEKAAQPIFLRQF*SCCPGW
Trigger: CCAGCCTGGACAACAAGAGCAAAACTGTCTCAAAAA...TATGGGCTGGGCTGCCTTTTCCCATGGGTCTTCATTCCCAATGGAAAGTTCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
CDS-3UTR GCA 90 bp TTCAGAGCTACTGTAGCCCTTGGGCACAACCAACAGAAAGAGGCAAAGACTGCTTTTTTGAGACAGTTTTaGTCTTGTTGTCCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: FRATVALGHNQQKEAKTAFLRQF*SCCPGW
Trigger: CCAGCCTGGACAACAAGAGCAAAACTGTCTCAAAAA...AGCAGTCTTTGCCTCTTTCTGTTGGTTGTGCCCAAGGGCTACAGTAGCTCTGAA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
CDS-3UTR GCA 90 bp AATTCAAAGTGTCCAACAGCTCTGTGGAGGAGCTCAAAGCAAGAGTCCTCTTTCCATTCACCTTTGCTATaGAGTGCTCTGAACAGGAGG +
Preference number: 4 (lower is better)
Translates to: NSKCPTALWRSSKQESSFHSPLL*SALNRR
Trigger: CCTCCTGTTCAGAGCACTGCATAGCAAAGGTGAATG...GAAAGAGGACTCTTGCTTTGAGCTCCTCCACAGAGCTGTTGGACACTTTGAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536953.5
CDS-3UTR CCA 90 bp GGATTCTTCTGGACCGTTAACCACGTCCCCAAAGGAAAACCACACACACATTATCTCTACATTATCATGTaGGAAGGAACGGATGGCAGC +
Preference number: 4 (lower is better)
Translates to: GFFWTVNHVPKGKPHTHYLYIIM*EGTDGS
Trigger: GCTGCCATCCGTTCCTTCCCACATGATAATGTAGAG...ATAATGTGTGTGTGGTTTTCCTTTGGGGACGTGGTTAACGGTCCAGAAGAATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
CDS-3UTR CCA 90 bp GTTAAGGAGAAGAAAGAAAGGCAGAGTATCAGCACCATACAATGGGGGCAAGCACTCTACATTATCATGTaGGAAGGAACGGATGGCAGC +
Preference number: 4 (lower is better)
Translates to: VKEKKERQSISTIQWGQALYIIM*EGTDGS
Trigger: GCTGCCATCCGTTCCTTCCCACATGATAATGTAGAG...TGCTTGCCCCCATTGTATGGTGCTGATACTCTGCCTTTCTTTCTTCTCCTTAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000535988.3
ENST00000540782.1
CDS-3UTR CCA 90 bp CTTTCCATCTTCCTAGAGAAATTTAGTTACACTGTTGACTCCTTCCCTAAAGGGGGCTGCCCAGTGAAGTaGGGTATCTCTGTTGCCATC +
Preference number: 4 (lower is better)
Translates to: LSIFLEKFSYTVDSFPKGGCPVK*GISVAI
Trigger: GATGGCAACAGAGATACCCCACTTCACTGGGCAGCC...CCCTTTAGGGAAGGAGTCAACAGTGTAACTAAATTTCTCTAGGAAGATGGAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
CDS-3UTR CCA 90 bp TTTTTGTTGGGTTGTTTGGTTTGGGAAGGGGAGGTGCTATGGAGGTTATTGTTGCGGGAGATGGGTGTCTaGCCTATTAGGTTGATGACT +
Preference number: 4 (lower is better)
Translates to: FLLGCLVWEGEVLWRLLLREMGV*PIRLMT
Trigger: AGTCATCAACCTAATAGGCCAGACACCCATCTCCCG...CAACAATAACCTCCATAGCACCTCCCCTTCCCAAACCAAACAACCCAACAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
CDS-3UTR CCA 90 bp TTTCCCACTCCCATCCCAAGTCCACCCTCCCACCAATTGTATTGTATAAATCAATTCCTTCAAAGAAGCTaGCAGTGGAAGGCCCTTCAC +
Preference number: 4 (lower is better)
Translates to: FPTPIPSPPSHQLYCINQFLQRS*QWKALH
Trigger: GTGAAGGGCCTTCCACTGCCAGCTTCTTTGAAGGAA...TTGATTTATACAATACAATTGGTGGGAGGGTGGACTTGGGATGGGAGTGGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
CDS-3UTR CCA 90 bp TTTCCCACTCCCATCCCAAGTCCACCCTCCCACCAATTGTATTGTATAAATCAATTGGGTTGTTTGGTTTaGGAAGGGGAGGTGCTATGG +
Preference number: 4 (lower is better)
Translates to: FPTPIPSPPSHQLYCINQLGCLV*EGEVLW
Trigger: CCATAGCACCTCCCCTTCCCAAACCAAACAACCCAA...TTGATTTATACAATACAATTGGTGGGAGGGTGGACTTGGGATGGGAGTGGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
CDS-3UTR CCA 90 bp TTTGCACCATACTCCAATAGGACCTCCACACAAGCCTCATCTTTCTCTGCTGCATTCACATCTGCTCCCTaGACATCACTGAAGACAATC +
Preference number: 4 (lower is better)
Translates to: FAPYSNRTSTQASSFSAAFTSAP*TSLKTI
Trigger: GATTGTCTTCAGTGATGTCCAGGGAGCAGATGTGAA...TGCAGCAGAGAAAGATGAGGCTTGTGTGGAGGTCCTATTGGAGTATGGTGCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540143.5
3UTR CAA 72 bp ACAACCAACAGAAAGAGGCAAAGACTGCTGTTTCCTTaGATGAGGGGAAAGAGGTCCAGTCCCTTCCAAATG +
Preference number: 4 (lower is better)
Translates to: TTNRKRQRLLFP*MRGKRSSPFQM
Trigger: CATTTGGAAGGGACTGGACCTCTTTCCCCTCATCAAAGGAAACAGCAGTCTTTGCCTCTTTCTGTTGGTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
CDS-3UTR TCA 90 bp AAGAAAGAAAGGCAGAGTATCAGCACCATACAATGGGGGCAAGCAGGGTGGGGAAGAGAGTATTTGCTCTaGATGCTCTGCATAATATAC +
Preference number: 4 (lower is better)
Translates to: KKERQSISTIQWGQAGWGREYLL*MLCIIY
Trigger: GTATATTATGCAGAGCATTCAGAGCAAATACTCTCT...TCCCCACCCTGCTTGCCCCCATTGTATGGTGCTGATACTCTGCCTTTCTTTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000535988.3
ENST00000540782.1
CDS-3UTR TCA 90 bp GCTCCTTTTTCCAGAAGTAACTCCACACAGTCAGCATCTGACACCATACAGGCACTCCCTGGACATCACTaGAGACAATCTTATGTATCA +
Preference number: 4 (lower is better)
Translates to: APFSRSNSTQSASDTIQALPGHH*RQSYVS
Trigger: TGATACATAAGATTGTCTTCAGTGATGTCCAGGGAG...TGCCTGTATGGTGTCAGATGCTGACTGTGTGGAGTTACTTCTGGAAAAAGGAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000539464.5
ENST00000540143.5
CDS-3UTR TCA 90 bp CACCATACTCCAATAGGACCTCCACACAAGCCTCATCTTTCTCTGCTGCATAGTCTCCCTGGACATCACTaGAGACAATCTTATGTATCA +
Preference number: 4 (lower is better)
Translates to: HHTPIGPPHKPHLSLLHSLPGHH*RQSYVS
Trigger: TGATACATAAGATTGTCTTCAGTGATGTCCAGGGAG...ACTATGCAGCAGAGAAAGATGAGGCTTGTGTGGAGGTCCTATTGGAGTATGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540143.5
CDS-3UTR GCA 90 bp CTTTCCATCTTCCTAGAGAAATTTAGTTACACTGTTGACTCCTTCCCTAAAGGGTCAGTGTGCCATGAGTaGAGTTCACATCTGCTCCCC +
Preference number: 4 (lower is better)
Translates to: LSIFLEKFSYTVDSFPKGSVCHE*SSHLLP
Trigger: GGGGAGCAGATGTGAACTGCACTCATGGCACACTGA...CCCTTTAGGGAAGGAGTCAACAGTGTAACTAAATTTCTCTAGGAAGATGGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
CDS-3UTR GCA 90 bp CTTTCCATCTTCCTAGAGAAATTTAGTTACACTGTTGACTCCTTCCCTAAAGGGACCATACAGGCACAGTaGAAGGGCTTCAGTGTGCCA +
Preference number: 4 (lower is better)
Translates to: LSIFLEKFSYTVDSFPKGTIQAQ*KGFSVP
Trigger: TGGCACACTGAAGCCCTTGCACTGTGCCTGTATGGT...CCCTTTAGGGAAGGAGTCAACAGTGTAACTAAATTTCTCTAGGAAGATGGAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
CDS-3UTR GCA 90 bp GGATTCTTCTGGACCGTTAACCACGTCCCCAAAGGAAAACCACACACACATTATTTTGGGAAGGGGAGGTaGTATGGAGGTTATTGTTGT +
Preference number: 4 (lower is better)
Translates to: GFFWTVNHVPKGKPHTHYFGKGR*YGGYCC
Trigger: ACAACAATAACCTCCATAGCACCTCCCCTTCCCAAA...ATAATGTGTGTGTGGTTTTCCTTTGGGGACGTGGTTAACGGTCCAGAAGAATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
CDS-3UTR GCA 90 bp TTTCCCACTCCCATCCCAAGTCCACCCTCCCACCAATTGTATTGTATAAATCAACGTAGGTGTAGGAACTaGCTGGGAATCCCATTAGAA +
Preference number: 4 (lower is better)
Translates to: FPTPIPSPPSHQLYCINQRRCRN*LGIPLE
Trigger: TTCTAATGGGATTCCCAGGCAGTTCCTACACCTACG...TTGATTTATACAATACAATTGGTGGGAGGGTGGACTTGGGATGGGAGTGGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
CDS-3UTR CCA 90 bp TTTCCCACTCCCATCCCAAGTCCACCCTCCCACCAATTGTATTGTATAAATCAAGTGGGAAGGAACGGATaGCAGCAATTGTTCGGATTA +
Preference number: 4 (lower is better)
Translates to: FPTPIPSPPSHQLYCINQVGRNG*QQLFGL
Trigger: TAATCCGAACAATTGCTGCCATCCGTTCCTTCCCAC...TTGATTTATACAATACAATTGGTGGGAGGGTGGACTTGGGATGGGAGTGGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
CDS-3UTR CCA 90 bp TTTCCCACTCCCATCCCAAGTCCACCCTCCCACCAATTGTATTGTATAAATCAAGTGAGCCACCATGGCTaGCCTAAAATGCTTTCTAGA +
Preference number: 4 (lower is better)
Translates to: FPTPIPSPPSHQLYCINQVSHHG*PKMLSR
Trigger: TCTAGAAAGCATTTTAGGCCAGCCATGGTGGCTCAC...TTGATTTATACAATACAATTGGTGGGAGGGTGGACTTGGGATGGGAGTGGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
CDS-3UTR CCA 90 bp GTCATCCAGCCCAGTTCTGGATCTGCACCATTTGAGGTTATAGTATCTTCATCTAGCTACTGTAGCCCTTaGGCACAACCAACAGAAAGA +
Preference number: 4 (lower is better)
Translates to: VIQPSSGSAPFEVIVSSSSYCSP*AQPTER
Trigger: TCTTTCTGTTGGTTGTGCCCAAGGGCTACAGTAGCT...AGATGAAGATACTATAACCTCAAATGGTGCAGATCCAGAACTGGGCTGGATGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
CDS-3UTR TCA 90 bp GTGAAGTGGGGTATCTCTGTTGCCATCCAAAGCATTGGGGTTTGCACCATACTCAGAGAGTATTTGCTCTaGATGCTCTGCATAATATAC +
Preference number: 4 (lower is better)
Translates to: VKWGISVAIQSIGVCTILREYLL*MLCIIY
Trigger: GTATATTATGCAGAGCATTCAGAGCAAATACTCTCT...GAGTATGGTGCAAACCCCAATGCTTTGGATGGCAACAGAGATACCCCACTTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000535055.5
ENST00000536071.5
ENST00000536953.5
ENST00000539528.5
ENST00000539865.5
ENST00000540143.5
CDS-3UTR TCA 90 bp TTTTTGTTGGGTTGTTTGGTTTGGGAAGGGGAGGTGCTATGGAGGTTATTGTTGAATCCAGAAGGATGCTaGCACTCTCAAGATTTCCCT +
Preference number: 4 (lower is better)
Translates to: FLLGCLVWEGEVLWRLLLNPEGC*HSQDFP
Trigger: AGGGAAATCTTGAGAGTGTCAGCATCCTTCTGGATT...CAACAATAACCTCCATAGCACCTCCCCTTCCCAAACCAAACAACCCAACAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
CDS-3UTR GCA 90 bp CTTTCCATCTTCCTAGAGAAATTTAGTTACACTGTTGACTCCTTCCCTAAAGGGAGTTTTTCACATAGCTaGGGGTCTCTGGCCACCTCT +
Preference number: 4 (lower is better)
Translates to: LSIFLEKFSYTVDSFPKGSFSHS*GSLATS
Trigger: AGAGGTGGCCAGAGACCCGCAGCTATGTGAAAAACT...CCCTTTAGGGAAGGAGTCAACAGTGTAACTAAATTTCTCTAGGAAGATGGAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
CDS-3UTR GCA 90 bp ACAGAAGAAGACATCTGTTTTCCAATTAGCTGTGTCAGTAGATTCCATTCATTGTTGTCCAGGCTGGAGTaGAATGGCGCGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: TEEDICFPISCVSRFHSLLSRLE*NGAILA
Trigger: AGCCAAGATCGCGCCATTGCACTCCAGCCTGGACAA...CAATGAATGGAATCTACTGACACAGCTAATTGGAAAACAGATGTCTTCTTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
CDS-3UTR CCA 90 bp CTTTCCATCTTCCTAGAGAAATTTAGTTACACTGTTGACTCCTTCCCTAAAGGGTGTCCAACAGCTCTGTaGAGGAGCTCAAAGCAAGAG +
Preference number: 4 (lower is better)
Translates to: LSIFLEKFSYTVDSFPKGCPTAL*RSSKQE
Trigger: CTCTTGCTTTGAGCTCCTCCACAGAGCTGTTGGACA...CCCTTTAGGGAAGGAGTCAACAGTGTAACTAAATTTCTCTAGGAAGATGGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
CDS-3UTR CCA 90 bp CTTTCCATCTTCCTAGAGAAATTTAGTTACACTGTTGACTCCTTCCCTAAAGGGTTGGGTTGTTTGGTTTaGGAAGGGGAGGTGCTATGG +
Preference number: 4 (lower is better)
Translates to: LSIFLEKFSYTVDSFPKGLGCLV*EGEVLW
Trigger: CCATAGCACCTCCCCTTCCCAAACCAAACAACCCAA...CCCTTTAGGGAAGGAGTCAACAGTGTAACTAAATTTCTCTAGGAAGATGGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
CDS-3UTR TCA 90 bp TATTGGCTATGCCAACATTACCTTGAGTTAGAAGTTCAGACTGGAGGAGGGAAGATGCCAACATTACCTTaGGTTAGAAGTTCAGACTGG +
Preference number: 4 (lower is better)
Translates to: YWLCQHYLELEVQTGGGKMPTLP*VRSSDW
Trigger: CCAGTCTGAACTTCTAACTCAAGGTAATGTTGGCAT...CTTCCCTCCTCCAGTCTGAACTTCTAACTCAAGGTAATGTTGGCATAGCCAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535988.3
ENST00000540782.1
CDS-3UTR GCA 90 bp ACAGAAGAAGACATCTGTTTTCCAATTAGCTGTGTCAGTAGATTCCATTCATTGTCAGTGTGCCATGAGTaGAGTTCACATCTGCTCCCC +
Preference number: 4 (lower is better)
Translates to: TEEDICFPISCVSRFHSLSVCHE*SSHLLP
Trigger: GGGGAGCAGATGTGAACTGCACTCATGGCACACTGA...CAATGAATGGAATCTACTGACACAGCTAATTGGAAAACAGATGTCTTCTTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
CDS-3UTR GCA 90 bp AGTGAACTTTCCATTGGGAATGAAGACCCATGGGAAAAGGCAGCCCAGCCCATAAGGAAGAGAAAAAGCTaGATTACAAGAAAAGTTCTC +
Preference number: 4 (lower is better)
Translates to: SELSIGNEDPWEKAAQPIRKRKS*ITRKVL
Trigger: GAGAACTTTTCTTGTAATGCAGCTTTTTCTCTTCCT...TATGGGCTGGGCTGCCTTTTCCCATGGGTCTTCATTCCCAATGGAAAGTTCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
CDS-3UTR CCA 90 bp CTTTCCATCTTCCTAGAGAAATTTAGTTACACTGTTGACTCCTTCCCTAAAGGGAGCTACTGTAGCCCTTaGGCACAACCAACAGAAAGA +
Preference number: 4 (lower is better)
Translates to: LSIFLEKFSYTVDSFPKGSYCSP*AQPTER
Trigger: TCTTTCTGTTGGTTGTGCCCAAGGGCTACAGTAGCT...CCCTTTAGGGAAGGAGTCAACAGTGTAACTAAATTTCTCTAGGAAGATGGAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
CDS-3UTR CCA 90 bp TTTCCAGAAGTAACTCCACACAGTCAGCATCTGACACCATACAGGCACAGTGCATATGTATCAAAGCACTaGAAACCTTATCATCAGGCA +
Preference number: 4 (lower is better)
Translates to: FPEVTPHSQHLTPYRHSAYVSKH*KPYHQA
Trigger: TGCCTGATGATAAGGTTTCCAGTGCTTTGATACATA...TGCACTGTGCCTGTATGGTGTCAGATGCTGACTGTGTGGAGTTACTTCTGGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539464.5
ENST00000540143.5
CDS-3UTR CCA 90 bp AAAGCATTGGGGTTTGCACCATACTCCAATAGGACCTCCACACAAGCCTCATCTTATGTATCAAAGCACTaGAAACCTTATCATCAGGCA +
Preference number: 4 (lower is better)
Translates to: KALGFAPYSNRTSTQASSYVSKH*KPYHQA
Trigger: TGCCTGATGATAAGGTTTCCAGTGCTTTGATACATA...AGATGAGGCTTGTGTGGAGGTCCTATTGGAGTATGGTGCAAACCCCAATGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540143.5
3UTR CAA 72 bp AAAAATAATTCCAAACTAAGCAGAGTGAACTTTCCATaGGGAATGAAGACCCATGGGAAAAGGCAGCCCAGC +
Preference number: 4 (lower is better)
Translates to: KNNSKLSRVNFP*GMKTHGKRQPS
Trigger: GCTGGGCTGCCTTTTCCCATGGGTCTTCATTCCCAATGGAAAGTTCACTCTGCTTAGTTTGGAATTATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
CDS-3UTR CCA 90 bp ACAGAAGAAGACATCTGTTTTCCAATTAGCTGTGTCAGTAGATTCCATTCATTGCGGGAGATGGGTGTCTaGCCTATTAGGTTGATGACT +
Preference number: 4 (lower is better)
Translates to: TEEDICFPISCVSRFHSLREMGV*PIRLMT
Trigger: AGTCATCAACCTAATAGGCCAGACACCCATCTCCCG...CAATGAATGGAATCTACTGACACAGCTAATTGGAAAACAGATGTCTTCTTCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
CDS-3UTR CCA 90 bp ACAGAAGAAGACATCTGTTTTCCAATTAGCTGTGTCAGTAGATTCCATTCATTGTGTCCAACAGCTCTGTaGAGGAGCTCAAAGCAAGAG +
Preference number: 4 (lower is better)
Translates to: TEEDICFPISCVSRFHSLCPTAL*RSSKQE
Trigger: CTCTTGCTTTGAGCTCCTCCACAGAGCTGTTGGACA...CAATGAATGGAATCTACTGACACAGCTAATTGGAAAACAGATGTCTTCTTCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
CDS-3UTR CCA 90 bp ACAGAAGAAGACATCTGTTTTCCAATTAGCTGTGTCAGTAGATTCCATTCATTGTTCCTTCAAAGAAGCTaGCAGTGGAAGGCCCTTCAC +
Preference number: 4 (lower is better)
Translates to: TEEDICFPISCVSRFHSLFLQRS*QWKALH
Trigger: GTGAAGGGCCTTCCACTGCCAGCTTCTTTGAAGGAA...CAATGAATGGAATCTACTGACACAGCTAATTGGAAAACAGATGTCTTCTTCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
CDS-3UTR TCA 90 bp TTTTTGTTGGGTTGTTTGGTTTGGGAAGGGGAGGTGCTATGGAGGTTATTGTTGAGAGAGTATTTGCTCTaGATGCTCTGCATAATATAC +
Preference number: 4 (lower is better)
Translates to: FLLGCLVWEGEVLWRLLLREYLL*MLCIIY
Trigger: GTATATTATGCAGAGCATTCAGAGCAAATACTCTCT...CAACAATAACCTCCATAGCACCTCCCCTTCCCAAACCAAACAACCCAACAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
CDS-3UTR GCA 90 bp ACAGAAGAAGACATCTGTTTTCCAATTAGCTGTGTCAGTAGATTCCATTCATTGGATGACTCTGACCTCTaGGCCATAATCCAGAAGGAT +
Preference number: 4 (lower is better)
Translates to: TEEDICFPISCVSRFHSLDDSDL*AIIQKD
Trigger: ATCCTTCTGGATTATGGCGCAGAGGTCAGAGTCATC...CAATGAATGGAATCTACTGACACAGCTAATTGGAAAACAGATGTCTTCTTCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
CDS-3UTR CCA 90 bp ACAGAAGAAGACATCTGTTTTCCAATTAGCTGTGTCAGTAGATTCCATTCATTGTTTTGTTGGGTTGTTTaGTTTGGGAAGGGGAGGTGC +
Preference number: 4 (lower is better)
Translates to: TEEDICFPISCVSRFHSLFCWVV*FGKGRC
Trigger: GCACCTCCCCTTCCCAAACCAAACAACCCAACAAAA...CAATGAATGGAATCTACTGACACAGCTAATTGGAAAACAGATGTCTTCTTCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
CDS GCA 90 bp AGGCCCTCTGTTTACCGGACTAGAAGACCAACTAAGATGGGCGCCTaGGCACTGATGAGTGTTCGTCAGCGGGGCGCGCCTGCGCAGACT +
Preference number: 5 (lower is better)
Translates to: RPSVYRTRRPTKMGA*ALMSVRQRGAPAQT
Trigger: AGTCTGCGCAGGCGCGCCCCGCTGACGAACACTCATCAGTGCGCAGGCGCCCATCTTAGTTGGTCTTCTAGTCCGGTAAACAGAGGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539503.5
CDS GCA 90 bp GGGTTACTTTCTCCTTTTACTCAGAGGCTTTGCGCGCAGGCTCAGTaGAGCGTTCTCGGCCACAGCCGCAGGGTTCGGGTCTTGGTCCCT +
Preference number: 5 (lower is better)
Translates to: GLLSPFTQRLCAQAQ*SVLGHSRRVRVLVP
Trigger: AGGGACCAAGACCCGAACCCTGCGGCTGTGGCCGAGAACGCTGCACTGAGCCTGCGCGCAAAGCCTCTGAGTAAAAGGAGAAAGTAACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539503.5
CDS GCA 90 bp AGAGGCCTAGTTAGGGGGTTACTTTCTCCTTTTACTCAGAGGCTTTaGGCGCAGGCTCAGTGCAGCGTTCTCGGCCACAGCCGCAGGGTT +
Preference number: 5 (lower is better)
Translates to: RGLVRGLLSPFTQRL*AQAQCSVLGHSRRV
Trigger: AACCCTGCGGCTGTGGCCGAGAACGCTGCACTGAGCCTGCGCGCAAAGCCTCTGAGTAAAAGGAGAAAGTAACCCCCTAACTAGGCCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539503.5
CDS-3UTR CAA 90 bp TCCAGGGCATTGACAGAGGCCCCGCTCTCTAGGAGAGCCCGCACACACTCAGCATTGCCATCCAAAGCATaGGGGTTTGCACCATACTCC +
Preference number: 5 (lower is better)
Translates to: SRALTEAPLSRRARTHSALPSKA*GFAPYS
Trigger: GGAGTATGGTGCAAACCCCAATGCTTTGGATGGCAA...TGCTGAGTGTGTGCGGGCTCTCCTAGAGAGCGGGGCCTCTGTCAATGCCCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536953.5
ENST00000539528.5
CDS-3UTR CAA 90 bp AGGGCATTGACAGAGGCCCCGCTCTCTAGGAGAGCCCGCACACACTCAGCATTGAGTGGGGTATCTCTGTaGCCATCCAAAGCATTGGGG +
Preference number: 5 (lower is better)
Translates to: RALTEAPLSRRARTHSALSGVSL*PSKALG
Trigger: CCCCAATGCTTTGGATGGCAACAGAGATACCCCACT...CAATGCTGAGTGTGTGCGGGCTCTCCTAGAGAGCGGGGCCTCTGTCAATGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000535055.5
ENST00000536953.5
ENST00000539528.5
CDS-3UTR CAA 90 bp ACTCCTCCCTGCTGGAACACACACCGTAGGTGTAGGAACTGCCTGGGAATCCCAGTCTGGCCTATTAGGTaGATGACTCTGACCTCTGCG +
Preference number: 5 (lower is better)
Translates to: TPPCWNTHRRCRNCLGIPVWPIR*MTLTSA
Trigger: CGCAGAGGTCAGAGTCATCAACCTAATAGGCCAGAC...TGGGATTCCCAGGCAGTTCCTACACCTACGGTGTGTGTTCCAGCAGGGAGGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
CDS TCA 90 bp GCATCTGACACCATACAGGCACAGTGCAAGGGCTTCAGTGTGCCATaGGTGCAGTTCACATCTGCTCCCCCTCTGATGAGGTCCTCTACA +
Preference number: 5 (lower is better)
Translates to: ASDTIQAQCKGFSVP*VQFTSAPPLMRSST
Trigger: TGTAGAGGACCTCATCAGAGGGGGAGCAGATGTGAACTGCACTCATGGCACACTGAAGCCCTTGCACTGTGCCTGTATGGTGTCAGATGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000317697.8
ENST00000535055.5
ENST00000535988.3
ENST00000536071.5
ENST00000536549.5
ENST00000536953.5
ENST00000539503.5
ENST00000539528.5
ENST00000540212.5
ENST00000540782.1
ENST00000545791.5
CDS GCA 90 bp GGCACAGTGCAAGGGCTTCAGTGTGCCATGAGTGCAGTTCACATCTaGTCCCTGTGGGCAGAAGACAACTTCAGTCAGTGTGTTCAGCTC +
Preference number: 5 (lower is better)
Translates to: GTVQGLQCAMSAVHI*SLWAEDNFSQCVQL
Trigger: GAGCTGAACACACTGACTGAAGTTGTCTTCTGCCCACAGGGAGCAGATGTGAACTGCACTCATGGCACACTGAAGCCCTTGCACTGTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536938.1
CDS TCA 90 bp GCATCTGACACCATACAGGCACAGTGCAAGGGCTTCAGTGTGCCATaGGTGCAGTTCACATCTGCTCCCTGTGGGCAGAAGACAACTTCA +
Preference number: 5 (lower is better)
Translates to: ASDTIQAQCKGFSVP*VQFTSAPCGQKTTS
Trigger: TGAAGTTGTCTTCTGCCCACAGGGAGCAGATGTGAACTGCACTCATGGCACACTGAAGCCCTTGCACTGTGCCTGTATGGTGTCAGATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536938.1
CDS GCA 90 bp CTGACACCATACAGGCACAGTGCAAGGGCTTCAGTGTGCCATGAGTaGAGTTCACATCTGCTCCCTGTGGGCAGAAGACAACTTCAGTCA +
Preference number: 5 (lower is better)
Translates to: LTPYRHSARASVCHE*SSHLLPVGRRQLQS
Trigger: TGACTGAAGTTGTCTTCTGCCCACAGGGAGCAGATGTGAACTGCACTCATGGCACACTGAAGCCCTTGCACTGTGCCTGTATGGTGTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536938.1
CDS GCA 90 bp GGACAGCAGCAAAGAAGCTTGCATGGTTACCCACTACCTTTGCTATaGAGTGCTCTGAACAGGAGGGTCAGCAAGCAACTCCCAGGGAGT +
Preference number: 5 (lower is better)
Translates to: GQQQRSLHGYPLPLL*SALNRRVSKQLPGS
Trigger: ACTCCCTGGGAGTTGCTTGCTGACCCTCCTGTTCAGAGCACTGCATAGCAAAGGTAGTGGGTAACCATGCAAGCTTCTTTGCTGCTGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539528.5
CDS CCA 90 bp CCGCAGGGTTCGGGTCTTGGTCCCTTGGCTCTCAAATGTTTGACCTaGAACTTGACTGGACCAGCCAAACTGCTTGATCTCTGCACATGT +
Preference number: 5 (lower is better)
Translates to: PQGSGLGPLALKCLT*NLTGPAKLLDLCTC
Trigger: ACATGTGCAGAGATCAAGCAGTTTGGCTGGTCCAGTCAAGTTCCAGGTCAAACATTTGAGAGCCAAGGGACCAAGACCCGAACCCTGCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539503.5
CDS-3UTR CAA 90 bp CCCATAACTCCTCCCTGCTGGAACACACACCGTAGGTGTAGGAACTGCCTGGGACCAAAGCATTGGGGTTaGCACCATACTCCAATAGGA +
Preference number: 5 (lower is better)
Translates to: PITPPCWNTHRRCRNCLGPKHWG*HHTPIG
Trigger: TCCTATTGGAGTATGGTGCAAACCCCAATGCTTTGG...TCCCAGGCAGTTCCTACACCTACGGTGTGTGTTCCAGCAGGGAGGAGTTATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
CDS-3UTR CAA 90 bp ACTCCACACAGTCAGCATCTGACACCATACAGGCACAGTGCAAGGGCTTCAGTGAGTGGGGTATCTCTGTaGCCATCCAAAGCATTGGGG +
Preference number: 5 (lower is better)
Translates to: TPHSQHLTPYRHSARASVSGVSL*PSKALG
Trigger: CCCCAATGCTTTGGATGGCAACAGAGATACCCCACT...CACTGAAGCCCTTGCACTGTGCCTGTATGGTGTCAGATGCTGACTGTGTGGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539865.5
ENST00000540143.5
CDS-3UTR CAA 90 bp TGGAGGGCTGTTCGGTTATACCCATCCAGGGCATTCACCTTTGCTATGCAGTGCCCAGGGCATTCACCTTaGCTATGCAGTGCTCTGAAC +
Preference number: 5 (lower is better)
Translates to: WRAVRLYPSRAFTFAMQCPGHSP*LCSALN
Trigger: GTTCAGAGCACTGCATAGCAAAGGTGAATGCCCTGG...GCACTGCATAGCAAAGGTGAATGCCCTGGATGGGTATAACCGAACAGCCCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535055.5
ENST00000536071.5
ENST00000536953.5
CDS TCA 90 bp GCATCTGACACCATACAGGCACAGTGCAAGGGCTTCAGTGTGCCATaGGTGCAGTTCACATCTGCTCCCTTATCATCAGGCAGGAAAGCT +
Preference number: 5 (lower is better)
Translates to: ASDTIQAQCKGFSVP*VQFTSAPLSSGRKA
Trigger: AGCTTTCCTGCCTGATGATAAGGGAGCAGATGTGAACTGCACTCATGGCACACTGAAGCCCTTGCACTGTGCCTGTATGGTGTCAGATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539865.5
CDS-3UTR CAA 90 bp CTTTCTCTGCTGCATAGTGGAGGGCTGTTCGGTTATACCCATCCAGGGCATTCAAACGGATGGCAGCAATaGTTCGGATTAAGCGCTCGG +
Preference number: 5 (lower is better)
Translates to: LSLLHSGGLFGYTHPGHSNGWQQ*FGLSAR
Trigger: CCGAGCGCTTAATCCGAACAATTGCTGCCATCCGTT...TGAATGCCCTGGATGGGTATAACCGAACAGCCCTCCACTATGCAGCAGAGAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000535055.5
ENST00000536071.5
ENST00000536953.5
ENST00000539464.5
ENST00000539528.5
ENST00000539865.5
ENST00000540143.5
CDS-3UTR CAA 90 bp AGCCCGCACACACTCAGCATTGTTCTTAAAGGCTGCCCAGTGAAGTGGGGTATCTTGCCATCCAAAGCATaGGGGTTTGCACCATACTCC +
Preference number: 5 (lower is better)
Translates to: SPHTLSIVLKGCPVKWGILPSKA*GFAPYS
Trigger: GGAGTATGGTGCAAACCCCAATGCTTTGGATGGCAA...GATACCCCACTTCACTGGGCAGCCTTTAAGAACAATGCTGAGTGTGTGCGGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535055.5
ENST00000536953.5
ENST00000539528.5
ENST00000539865.5
CDS-3UTR CAA 90 bp GGCCACCTCTCGTGGCATGGTGCCATTTTTCCTCAATTCAAAGTGTCCAACAGCAGTGGGGTATCTCTGTaGCCATCCAAAGCATTGGGG +
Preference number: 5 (lower is better)
Translates to: GHLSWHGAIFPQFKVSNSSGVSL*PSKALG
Trigger: CCCCAATGCTTTGGATGGCAACAGAGATACCCCACT...GCTGTTGGACACTTTGAATTGAGGAAAAATGGCACCATGCCACGAGAGGTGGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536953.5
CDS-3UTR CAA 90 bp CCATCCAAAGCATTGGGGTTTGCACCATACTCCAATAGGACCTCCACACAAGCCGTCTGGCCTATTAGGTaGATGACTCTGACCTCTGCG +
Preference number: 5 (lower is better)
Translates to: PSKALGFAPYSNRTSTQAVWPIR*MTLTSA
Trigger: CGCAGAGGTCAGAGTCATCAACCTAATAGGCCAGAC...GGCTTGTGTGGAGGTCCTATTGGAGTATGGTGCAAACCCCAATGCTTTGGATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536953.5
ENST00000539528.5
CDS-3UTR CAA 90 bp CTCCACACAAGCCTCATCTTTCTCTGCTGCATAGTGGAGGGCTGTTCGGTTATAAACGGATGGCAGCAATaGTTCGGATTAAGCGCTCGG +
Preference number: 5 (lower is better)
Translates to: LHTSLIFLCCIVEGCSVINGWQQ*FGLSAR
Trigger: CCGAGCGCTTAATCCGAACAATTGCTGCCATCCGTT...TATAACCGAACAGCCCTCCACTATGCAGCAGAGAAAGATGAGGCTTGTGTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000535055.5
ENST00000536071.5
ENST00000536953.5
ENST00000539464.5
ENST00000539528.5
ENST00000539865.5
ENST00000540143.5
CDS-3UTR CAA 90 bp AGTGAACTTTCCATTGGGAATGAAGACCCATGGGAAAAGGCAGCCCAGCCCATAAACGGATGGCAGCAATaGTTCGGATTAAGCGCTCGG +
Preference number: 5 (lower is better)
Translates to: SELSIGNEDPWEKAAQPINGWQQ*FGLSAR
Trigger: CCGAGCGCTTAATCCGAACAATTGCTGCCATCCGTT...TATGGGCTGGGCTGCCTTTTCCCATGGGTCTTCATTCCCAATGGAAAGTTCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
CDS-3UTR CAA 90 bp CTTTCTCTGCTGCATAGTGGAGGGCTGTTCGGTTATACCCATCCAGGGCATTCATTGCCATCCAAAGCATaGGGGTTTGCACCATACTCC +
Preference number: 5 (lower is better)
Translates to: LSLLHSGGLFGYTHPGHSLPSKA*GFAPYS
Trigger: GGAGTATGGTGCAAACCCCAATGCTTTGGATGGCAA...TGAATGCCCTGGATGGGTATAACCGAACAGCCCTCCACTATGCAGCAGAGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535055.5
ENST00000536071.5
ENST00000536953.5
ENST00000539528.5
ENST00000539865.5
ENST00000540143.5
CDS-3UTR CAA 90 bp GTGAAGTGGGGTATCTCTGTTGCCATCCAAAGCATTGGGGTTTGCACCATACTCAGTGGGGTATCTCTGTaGCCATCCAAAGCATTGGGG +
Preference number: 5 (lower is better)
Translates to: VKWGISVAIQSIGVCTILSGVSL*PSKALG
Trigger: CCCCAATGCTTTGGATGGCAACAGAGATACCCCACT...GAGTATGGTGCAAACCCCAATGCTTTGGATGGCAACAGAGATACCCCACTTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000535055.5
ENST00000536071.5
ENST00000536953.5
ENST00000539528.5
ENST00000539865.5
ENST00000540143.5
CDS-3UTR CAA 90 bp AGTGAACTTTCCATTGGGAATGAAGACCCATGGGAAAAGGCAGCCCAGCCCATAAGTGGGGTATCTCTGTaGCCATCCAAAGCATTGGGG +
Preference number: 5 (lower is better)
Translates to: SELSIGNEDPWEKAAQPISGVSL*PSKALG
Trigger: CCCCAATGCTTTGGATGGCAACAGAGATACCCCACT...TATGGGCTGGGCTGCCTTTTCCCATGGGTCTTCATTCCCAATGGAAAGTTCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
CDS-3UTR CAA 90 bp ACAAGCCTCATCTTTCTCTGCTGCATAGTGGAGGGCTGTTCGGTTATACCCATCAGTGGGGTATCTCTGTaGCCATCCAAAGCATTGGGG +
Preference number: 5 (lower is better)
Translates to: TSLIFLCCIVEGCSVIPISGVSL*PSKALG
Trigger: CCCCAATGCTTTGGATGGCAACAGAGATACCCCACT...GATGGGTATAACCGAACAGCCCTCCACTATGCAGCAGAGAAAGATGAGGCTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535055.5
ENST00000536071.5
ENST00000536953.5
ENST00000539528.5
ENST00000539865.5
ENST00000540143.5
CDS-3UTR CAA 90 bp CACAAGCCTCATCTTTCTCTGCTGCATAGTGGAGGGCTGTTCGGTTATACCCATCCAGGGCATTCACCTTaGCTATGCAGTGCTCTGAAC +
Preference number: 5 (lower is better)
Translates to: HKPHLSLLHSGGLFGYTHPGHSP*LCSALN
Trigger: GTTCAGAGCACTGCATAGCAAAGGTGAATGCCCTGG...ATGGGTATAACCGAACAGCCCTCCACTATGCAGCAGAGAAAGATGAGGCTTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535055.5
ENST00000536071.5
ENST00000536953.5
CDS-3UTR CAA 90 bp TGGAGGGCTGTTCGGTTATACCCATCCAGGGCATTCACCTGTAAAAAGGGAGGAGGTTACCCACTACCTTaGCTATGCAGTGCTCTGAAC +
Preference number: 5 (lower is better)
Translates to: WRAVRLYPSRAFTCKKGGGYPLP*LCSALN
Trigger: GTTCAGAGCACTGCATAGCAAAGGTAGTGGGTAACC...TCCTCCCTTTTTACAGGTGAATGCCCTGGATGGGTATAACCGAACAGCCCTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539528.5
CDS CCA 90 bp TCAGTTTTTCACATAGCTGCGGGTCTCTGGCCACCTCTCGTGGCATaGTGCCATTTTTCCTCAATTCAAAGTGTCCAACAGCTCTGTGGA +
Preference number: 5 (lower is better)
Translates to: SVFHIAAGLWPPLVA*CHFSSIQSVQQLCG
Trigger: TCCACAGAGCTGTTGGACACTTTGAATTGAGGAAAAATGGCACCATGCCACGAGAGGTGGCCAGAGACCCGCAGCTATGTGAAAAACTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000317697.8
ENST00000536549.5
ENST00000536938.1
ENST00000537754.1
CDS CCA 90 bp GAGCTGAGCACAGAACAGTCAGTTTTTCACATAGCTGCGGGTCTCTaGCCACCTCTCGTGGCATGGTGCCATTTTTCCTCAATTCAAAGT +
Preference number: 5 (lower is better)
Translates to: ELSTEQSVFHIAAGL*PPLVAWCHFSSIQS
Trigger: ACTTTGAATTGAGGAAAAATGGCACCATGCCACGAGAGGTGGCCAGAGACCCGCAGCTATGTGAAAAACTGACTGTTCTGTGCTCAGCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000317697.8
ENST00000536549.5
ENST00000536938.1
ENST00000537754.1
CDS-3UTR CAA 90 bp GGTAGATGGACCATCACAAAAGGAGCTCTTACATGCTTTTCCCACTCCCATCCCTTGCCATCCAAAGCATaGGGGTTTGCACCATACTCC +
Preference number: 5 (lower is better)
Translates to: GRWTITKGALTCFSHSHPLPSKA*GFAPYS
Trigger: GGAGTATGGTGCAAACCCCAATGCTTTGGATGGCAA...GGGATGGGAGTGGGAAAAGCATGTAAGAGCTCCTTTTGTGATGGTCCATCTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
CDS-3UTR CAA 90 bp AGTGGGGTATCTCTGTTGCCATCCAAAGCATTGGGGTTTGCACCATACTCCAATAGTGGGGTATCTCTGTaGCCATCCAAAGCATTGGGG +
Preference number: 5 (lower is better)
Translates to: SGVSLLPSKALGFAPYSNSGVSL*PSKALG
Trigger: CCCCAATGCTTTGGATGGCAACAGAGATACCCCACT...ATTGGAGTATGGTGCAAACCCCAATGCTTTGGATGGCAACAGAGATACCCCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000535055.5
ENST00000536071.5
ENST00000536953.5
ENST00000539528.5
ENST00000539865.5
ENST00000540143.5
CDS-3UTR CAA 90 bp TGGCTATGCCAACATTACCTTGAGTTAGAAGTTCAGACTGGAGGAGGGAAGAGAAACGGATGGCAGCAATaGTTCGGATTAAGCGCTCGG +
Preference number: 5 (lower is better)
Translates to: WLCQHYLELEVQTGGGKRNGWQQ*FGLSAR
Trigger: CCGAGCGCTTAATCCGAACAATTGCTGCCATCCGTT...TCTCTTCCCTCCTCCAGTCTGAACTTCTAACTCAAGGTAATGTTGGCATAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535988.3
ENST00000540782.1
CDS-3UTR CAA 90 bp AGTGAACTTTCCATTGGGAATGAAGACCCATGGGAAAAGGCAGCCCAGCCCATACCAAAGCATTGGGGTTaGCACCATACTCCAATAGGA +
Preference number: 5 (lower is better)
Translates to: SELSIGNEDPWEKAAQPIPKHWG*HHTPIG
Trigger: TCCTATTGGAGTATGGTGCAAACCCCAATGCTTTGG...TATGGGCTGGGCTGCCTTTTCCCATGGGTCTTCATTCCCAATGGAAAGTTCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
CDS-3UTR CAA 90 bp TCTCTGTTGCCATCCAAAGCATTGGGGTTTGCACCATACTCCAATAGGACCTCCCCAAAGCATTGGGGTTaGCACCATACTCCAATAGGA +
Preference number: 5 (lower is better)
Translates to: SLLPSKALGFAPYSNRTSPKHWG*HHTPIG
Trigger: TCCTATTGGAGTATGGTGCAAACCCCAATGCTTTGG...GGAGGTCCTATTGGAGTATGGTGCAAACCCCAATGCTTTGGATGGCAACAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000535055.5
ENST00000536071.5
ENST00000536953.5
ENST00000539528.5
ENST00000539865.5
ENST00000540143.5
CDS-3UTR CAA 90 bp CTCTGCGCCATAATCCAGAAGGATGCTGACACTCTCAAGATTTCCCTTCATGGCCCAAAGCATTGGGGTTaGCACCATACTCCAATAGGA +
Preference number: 5 (lower is better)
Translates to: LCAIIQKDADTLKISLHGPKHWG*HHTPIG
Trigger: TCCTATTGGAGTATGGTGCAAACCCCAATGCTTTGG...GCCATGAAGGGAAATCTTGAGAGTGTCAGCATCCTTCTGGATTATGGCGCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536953.5
ENST00000539528.5
CDS-3UTR CAA 90 bp CTCAGCATTGTTCTTAAAGGCTGCCCAGTGAAGTGGGGTATCTCTGTTGCCATCCCAAAGCATTGGGGTTaGCACCATACTCCAATAGGA +
Preference number: 5 (lower is better)
Translates to: LSIVLKGCPVKWGISVAIPKHWG*HHTPIG
Trigger: TCCTATTGGAGTATGGTGCAAACCCCAATGCTTTGG...GATGGCAACAGAGATACCCCACTTCACTGGGCAGCCTTTAAGAACAATGCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535055.5
ENST00000536953.5
ENST00000539528.5
ENST00000539865.5
CDS-3UTR CAA 90 bp GGGGTATCTCTGTTGCCATCCAAAGCATTGGGGTTTGCACCATACTCCAATAGGCCAAAGCATTGGGGTTaGCACCATACTCCAATAGGA +
Preference number: 5 (lower is better)
Translates to: GVSLLPSKALGFAPYSNRPKHWG*HHTPIG
Trigger: TCCTATTGGAGTATGGTGCAAACCCCAATGCTTTGG...CCTATTGGAGTATGGTGCAAACCCCAATGCTTTGGATGGCAACAGAGATACCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000535055.5
ENST00000536071.5
ENST00000536953.5
ENST00000539528.5
ENST00000539865.5
ENST00000540143.5
CDS-3UTR CAA 90 bp GACCTCTGCGCCATAATCCAGAAGGATGCTGACACTCTCAAGATTTCCCTTCATTTGCCATCCAAAGCATaGGGGTTTGCACCATACTCC +
Preference number: 5 (lower is better)
Translates to: DLCAIIQKDADTLKISLHLPSKA*GFAPYS
Trigger: GGAGTATGGTGCAAACCCCAATGCTTTGGATGGCAA...ATGAAGGGAAATCTTGAGAGTGTCAGCATCCTTCTGGATTATGGCGCAGAGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536953.5
ENST00000539528.5
CDS-3UTR CAA 90 bp GTATCTCTGTTGCCATCCAAAGCATTGGGGTTTGCACCATACTCCAATAGGACCTTGCCATCCAAAGCATaGGGGTTTGCACCATACTCC +
Preference number: 5 (lower is better)
Translates to: VSLLPSKALGFAPYSNRTLPSKA*GFAPYS
Trigger: GGAGTATGGTGCAAACCCCAATGCTTTGGATGGCAA...GGTCCTATTGGAGTATGGTGCAAACCCCAATGCTTTGGATGGCAACAGAGATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000535055.5
ENST00000536071.5
ENST00000536953.5
ENST00000539528.5
ENST00000539865.5
ENST00000540143.5
CDS-3UTR CAA 90 bp TTGGGCACAACCAACAGAAAGAGGCAAAGACTGCTGTTTCCTTTGATGAGGGGAAGACTGCTGTTTCCTTaGATGAGGGGAAAGAGGTCC +
Preference number: 5 (lower is better)
Translates to: LGTTNRKRQRLLFPLMRGRLLFP*MRGKRS
Trigger: GGACCTCTTTCCCCTCATCAAAGGAAACAGCAGTCT...TCCCCTCATCAAAGGAAACAGCAGTCTTTGCCTCTTTCTGTTGGTTGTGCCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
CDS CCA 90 bp CTTATGTATCAAAGCACTGGAAACCTTATCATCAGGCAGGAAAGCTaGACCAGCAATCCACTTTCTATGGCCACCATGCTCCCTCTGATG +
Preference number: 5 (lower is better)
Translates to: LMYQSTGNLIIRQES*TSNPLSMATMLPLM
Trigger: CATCAGAGGGAGCATGGTGGCCATAGAAAGTGGATTGCTGGTCCAGCTTTCCTGCCTGATGATAAGGTTTCCAGTGCTTTGATACATAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539464.5
ENST00000540143.5
CDS-3UTR CAA 90 bp TTTTTGTTGGGTTGTTTGGTTTGGGAAGGGGAGGTGCTATGGAGGTTATTGTTGAACGGATGGCAGCAATaGTTCGGATTAAGCGCTCGG +
Preference number: 5 (lower is better)
Translates to: FLLGCLVWEGEVLWRLLLNGWQQ*FGLSAR
Trigger: CCGAGCGCTTAATCCGAACAATTGCTGCCATCCGTT...CAACAATAACCTCCATAGCACCTCCCCTTCCCAAACCAAACAACCCAACAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
CDS-3UTR CAA 90 bp AGTGGGGTATCTCTGTTGCCATCCAAAGCATTGGGGTTTGCACCATACTCCAATCCAAAGCATTGGGGTTaGCACCATACTCCAATAGGA +
Preference number: 5 (lower is better)
Translates to: SGVSLLPSKALGFAPYSNPKHWG*HHTPIG
Trigger: TCCTATTGGAGTATGGTGCAAACCCCAATGCTTTGG...ATTGGAGTATGGTGCAAACCCCAATGCTTTGGATGGCAACAGAGATACCCCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000535055.5
ENST00000536071.5
ENST00000536953.5
ENST00000539528.5
ENST00000539865.5
ENST00000540143.5
CDS-3UTR CAA 90 bp GTCATCCAGCCCAGTTCTGGATCTGCACCATTTGAGGTTATAGTATCTTCATCTAGTGGGGTATCTCTGTaGCCATCCAAAGCATTGGGG +
Preference number: 5 (lower is better)
Translates to: VIQPSSGSAPFEVIVSSSSGVSL*PSKALG
Trigger: CCCCAATGCTTTGGATGGCAACAGAGATACCCCACT...AGATGAAGATACTATAACCTCAAATGGTGCAGATCCAGAACTGGGCTGGATGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
CDS-3UTR CAA 90 bp TTTTTGTTGGGTTGTTTGGTTTGGGAAGGGGAGGTGCTATGGAGGTTATTGTTGGTCTGGCCTATTAGGTaGATGACTCTGACCTCTGCG +
Preference number: 5 (lower is better)
Translates to: FLLGCLVWEGEVLWRLLLVWPIR*MTLTSA
Trigger: CGCAGAGGTCAGAGTCATCAACCTAATAGGCCAGAC...CAACAATAACCTCCATAGCACCTCCCCTTCCCAAACCAAACAACCCAACAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
CDS-3UTR CAA 90 bp GTCATCCAGCCCAGTTCTGGATCTGCACCATTTGAGGTTATAGTATCTTCATCTGTTGGGTTGTTTGGTTaGGGAAGGGGAGGTGCTATG +
Preference number: 5 (lower is better)
Translates to: VIQPSSGSAPFEVIVSSSVGLFG*GRGGAM
Trigger: CATAGCACCTCCCCTTCCCAAACCAAACAACCCAAC...AGATGAAGATACTATAACCTCAAATGGTGCAGATCCAGAACTGGGCTGGATGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
CDS-3UTR CAA 90 bp TTGGGCACAACCAACAGAAAGAGGCAAAGACTGCTGTTTCCTTTGATGAGGGGAAGAGTGAACTTTCCATaGGGAATGAAGACCCATGGG +
Preference number: 5 (lower is better)
Translates to: LGTTNRKRQRLLFPLMRGRVNFP*GMKTHG
Trigger: CCCATGGGTCTTCATTCCCAATGGAAAGTTCACTCT...TCCCCTCATCAAAGGAAACAGCAGTCTTTGCCTCTTTCTGTTGGTTGTGCCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
CDS-3UTR CAA 90 bp GTCATCCAGCCCAGTTCTGGATCTGCACCATTTGAGGTTATAGTATCTTCATCTTTGCCATCCAAAGCATaGGGGTTTGCACCATACTCC +
Preference number: 5 (lower is better)
Translates to: VIQPSSGSAPFEVIVSSSLPSKA*GFAPYS
Trigger: GGAGTATGGTGCAAACCCCAATGCTTTGGATGGCAA...AGATGAAGATACTATAACCTCAAATGGTGCAGATCCAGAACTGGGCTGGATGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
CDS-3UTR CAA 90 bp TTATACCCATCCAGGGCATTCACCTGTAAAAAGGGAGGAACTATTACAGTAGACGTCTGGCCTATTAGGTaGATGACTCTGACCTCTGCG +
Preference number: 5 (lower is better)
Translates to: LYPSRAFTCKKGGTITVDVWPIR*MTLTSA
Trigger: CGCAGAGGTCAGAGTCATCAACCTAATAGGCCAGAC...GTCTACTGTAATAGTTCCTCCCTTTTTACAGGTGAATGCCCTGGATGGGTATAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539528.5
CDS-3UTR CAA 90 bp GTCATCCAGCCCAGTTCTGGATCTGCACCATTTGAGGTTATAGTATCTTCATCTAGACTGCTGTTTCCTTaGATGAGGGGAAAGAGGTCC +
Preference number: 5 (lower is better)
Translates to: VIQPSSGSAPFEVIVSSSRLLFP*MRGKRS
Trigger: GGACCTCTTTCCCCTCATCAAAGGAAACAGCAGTCT...AGATGAAGATACTATAACCTCAAATGGTGCAGATCCAGAACTGGGCTGGATGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
CDS-3UTR CAA 90 bp GGATTCTTCTGGACCGTTAACCACGTCCCCAAAGGAAAACCACACACACATTATAGAGTGAACTTTCCATaGGGAATGAAGACCCATGGG +
Preference number: 5 (lower is better)
Translates to: GFFWTVNHVPKGKPHTHYRVNFP*GMKTHG
Trigger: CCCATGGGTCTTCATTCCCAATGGAAAGTTCACTCT...ATAATGTGTGTGTGGTTTTCCTTTGGGGACGTGGTTAACGGTCCAGAAGAATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
CDS TCA 90 bp TCTCAAATGTTTGACCTGGAACTTGACTGGACCAGCCAAACTGCTTaGTCTCTGCACATGTTTCCCATGGCCTTTTGTGCTTCTCCAATA +
Preference number: 5 (lower is better)
Translates to: SQMFDLELDWTSQTA*SLHMFPMAFCASPI
Trigger: TATTGGAGAAGCACAAAAGGCCATGGGAAACATGTGCAGAGATCAAGCAGTTTGGCTGGTCCAGTCAAGTTCCAGGTCAAACATTTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539503.5
CDS-3UTR CAA 90 bp GGTAGATGGACCATCACAAAAGGAGCTCTTACATGCTTTTCCCACTCCCATCCCATCTTTGGGACACAATaGCTGTTAGCTGAAATTGTG +
Preference number: 5 (lower is better)
Translates to: GRWTITKGALTCFSHSHPIFGTQ*LLAEIV
Trigger: CACAATTTCAGCTAACAGCAATTGTGTCCCAAAGAT...GGGATGGGAGTGGGAAAAGCATGTAAGAGCTCCTTTTGTGATGGTCCATCTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
CDS TCA 90 bp GCAGCAATTGTTCGGATTAAGCGCTCGGAGAGAGAGTATTTGCTCTaGATGCTCTGCATAATATACCACATACTGGAACTCATCAAGGCT +
Preference number: 5 (lower is better)
Translates to: AAIVRIKRSEREYLL*MLCIIYHILELIKA
Trigger: AGCCTTGATGAGTTCCAGTATGTGGTATATTATGCAGAGCATTCAGAGCAAATACTCTCTCTCCGAGCGCTTAATCCGAACAATTGCTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000317697.8
ENST00000535055.5
ENST00000535988.3
ENST00000536071.5
ENST00000536549.5
ENST00000536953.5
ENST00000539464.5
ENST00000539503.5
ENST00000539528.5
ENST00000539865.5
ENST00000540143.5
ENST00000540212.5
ENST00000540782.1
ENST00000545791.5
ENST00000548228.1
ENST00000629941.1
CDS TCA 90 bp CTGGAACTCATCAAGGCTCAAGGTGTTCACATGCTCCAAACTGCCTaGAACAAAGAAGTTTTCGGCATATACAATATCACTGAGCACACC +
Preference number: 5 (lower is better)
Translates to: LELIKAQGVHMLQTA*NKEVFGIYNITEHT
Trigger: GGTGTGCTCAGTGATATTGTATATGCCGAAAACTTCTTTGTTTCAGGCAGTTTGGAGCATGTGAACACCTTGAGCCTTGATGAGTTCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548228.1
CDS-3UTR CAA 90 bp TTGGGCACAACCAACAGAAAGAGGCAAAGACTGCTGTTTCCTTTGATGAGGGGAATCTTTGGGACACAATaGCTGTTAGCTGAAATTGTG +
Preference number: 5 (lower is better)
Translates to: LGTTNRKRQRLLFPLMRGIFGTQ*LLAEIV
Trigger: CACAATTTCAGCTAACAGCAATTGTGTCCCAAAGAT...TCCCCTCATCAAAGGAAACAGCAGTCTTTGCCTCTTTCTGTTGGTTGTGCCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
CDS-3UTR CAA 90 bp TTCAGAGCTACTGTAGCCCTTGGGCACAACCAACAGAAAGAGGCAAAGACTGCTAGTAGATTCCATTCATaGTTTGTAGTTCCCAATCAG +
Preference number: 5 (lower is better)
Translates to: FRATVALGHNQQKEAKTASRFHS*FVVPNQ
Trigger: CTGATTGGGAACTACAAACAATGAATGGAATCTACT...AGCAGTCTTTGCCTCTTTCTGTTGGTTGTGCCCAAGGGCTACAGTAGCTCTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
CDS-3UTR CAA 90 bp ACAGAAGAAGACATCTGTTTTCCAATTAGCTGTGTCAGTAGATTCCATTCATTGAATTTAGTTACACTGTaGACTCCTTCCCTAAAGGGG +
Preference number: 5 (lower is better)
Translates to: TEEDICFPISCVSRFHSLNLVTL*TPSLKG
Trigger: CCCCTTTAGGGAAGGAGTCAACAGTGTAACTAAATT...CAATGAATGGAATCTACTGACACAGCTAATTGGAAAACAGATGTCTTCTTCTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
CDS-3UTR CAA 90 bp CTTTCCATCTTCCTAGAGAAATTTAGTTACACTGTTGACTCCTTCCCTAAAGGGAGTAGATTCCATTCATaGTTTGTAGTTCCCAATCAG +
Preference number: 5 (lower is better)
Translates to: LSIFLEKFSYTVDSFPKGSRFHS*FVVPNQ
Trigger: CTGATTGGGAACTACAAACAATGAATGGAATCTACT...CCCTTTAGGGAAGGAGTCAACAGTGTAACTAAATTTCTCTAGGAAGATGGAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
CDS GCA 72 bp CTGCGCACTGATGAGTGTTCGTCAGCGGGGCGCGCCTaGGCAGACTTGTGCAGCAGCTTTCGCCCTCCAGAG +
Preference number: 6 (lower is better)
Translates to: LRTDECSSAGRA*ADLCSSFRPPE
Trigger: CTCTGGAGGGCGAAAGCTGCTGCACAAGTCTGCGCAGGCGCGCCCCGCTGACGAACACTCATCAGTGCGCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539503.5
CDS GCA 72 bp TCTCCTTTTACTCAGAGGCTTTGCGCGCAGGCTCAGTaGAGCGTTCTCGGCCACAGCCGCAGGGTTCGGGTC +
Preference number: 6 (lower is better)
Translates to: SPFTQRLCAQAQ*SVLGHSRRVRV
Trigger: GACCCGAACCCTGCGGCTGTGGCCGAGAACGCTGCACTGAGCCTGCGCGCAAAGCCTCTGAGTAAAAGGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539503.5
CDS GCA 72 bp GTTTACCGGACTAGAAGACCAACTAAGATGGGCGCCTaGGCACTGATGAGTGTTCGTCAGCGGGGCGCGCCT +
Preference number: 6 (lower is better)
Translates to: VYRTRRPTKMGA*ALMSVRQRGAP
Trigger: AGGCGCGCCCCGCTGACGAACACTCATCAGTGCGCAGGCGCCCATCTTAGTTGGTCTTCTAGTCCGGTAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539503.5
CDS GCA 72 bp TTCCTTCAAAGAAGCTGGCAGTGGAAGGCCCTTCACTaGATCGGGGAGATACTGGAGTCCCAGGCTACGGCG +
Preference number: 6 (lower is better)
Translates to: FLQRSWQWKALH*IGEILESQATA
Trigger: CGCCGTAGCCTGGGACTCCAGTATCTCCCCGATGCAGTGAAGGGCCTTCCACTGCCAGCTTCTTTGAAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317697.8
ENST00000536549.5
CDS GCA 72 bp ACATACTGGAACTCATCAAGGCTCAAGGTGTTCACATaGTCCAAACTGCCTGCTGCGGGAGGGCCCGCGGCA +
Preference number: 6 (lower is better)
Translates to: TYWNSSRLKVFT*SKLPAAGGPAA
Trigger: TGCCGCGGGCCCTCCCGCAGCAGGCAGTTTGGAGCATGTGAACACCTTGAGCCTTGATGAGTTCCAGTATGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540212.5
ENST00000545791.5
CDS GCA 72 bp GGAGCTGAGCACAGAACAGTCAGTTTTTCACATAGCTaGGGGTCTCTGGCCACCTCTCGTGGCATGGTGCCA +
Preference number: 6 (lower is better)
Translates to: GAEHRTVSFSHS*GSLATSRGMVP
Trigger: TGGCACCATGCCACGAGAGGTGGCCAGAGACCCGCAGCTATGTGAAAAACTGACTGTTCTGTGCTCAGCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317697.8
ENST00000536549.5
ENST00000536938.1
ENST00000537754.1
CDS GCA 72 bp AGGGCACGAAACGCAAGGACGTGCGGTGTCACTTTCTaGACGGGCTCTAAACAGATCGCAGCAATCCCGGTA +
Preference number: 6 (lower is better)
Translates to: RARNARTCGVTF*TGSKQIAAIPV
Trigger: TACCGGGATTGCTGCGATCTGTTTAGAGCCCGTGCAGAAAGTGACACCGCACGTCCTTGCGTTTCGTGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540212.5
ENST00000545791.5
CDS GCA 72 bp GTTAGGGGGTTACTTTCTCCTTTTACTCAGAGGCTTTaGGCGCAGGCTCAGTGCAGCGTTCTCGGCCACAGC +
Preference number: 6 (lower is better)
Translates to: VRGLLSPFTQRL*AQAQCSVLGHS
Trigger: GCTGTGGCCGAGAACGCTGCACTGAGCCTGCGCGCAAAGCCTCTGAGTAAAAGGAGAAAGTAACCCCCTAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539503.5
CDS TCA 72 bp ACCATACAGGCACAGTGCAAGGGCTTCAGTGTGCCATaGGTGCAGTTCACATCTGCTCCCCCTCTGATGAGG +
Preference number: 6 (lower is better)
Translates to: TIQAQCKGFSVP*VQFTSAPPLMR
Trigger: CCTCATCAGAGGGGGAGCAGATGTGAACTGCACTCATGGCACACTGAAGCCCTTGCACTGTGCCTGTATGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000317697.8
ENST00000535055.5
ENST00000535988.3
ENST00000536071.5
ENST00000536549.5
ENST00000536953.5
ENST00000539503.5
ENST00000539528.5
ENST00000540212.5
ENST00000540782.1
ENST00000545791.5
CDS TCA 72 bp ACCATACAGGCACAGTGCAAGGGCTTCAGTGTGCCATaGGTGCAGTTCACATCTGCTCCCTGTGGGCAGAAG +
Preference number: 6 (lower is better)
Translates to: TIQAQCKGFSVP*VQFTSAPCGQK
Trigger: CTTCTGCCCACAGGGAGCAGATGTGAACTGCACTCATGGCACACTGAAGCCCTTGCACTGTGCCTGTATGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536938.1
CDS GCA 72 bp TACAGGCACAGTGCAAGGGCTTCAGTGTGCCATGAGTaGAGTTCACATCTGCTCCCTGTGGGCAGAAGACAA +
Preference number: 6 (lower is better)
Translates to: YRHSARASVCHE*SSHLLPVGRRQ
Trigger: TTGTCTTCTGCCCACAGGGAGCAGATGTGAACTGCACTCATGGCACACTGAAGCCCTTGCACTGTGCCTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536938.1
CDS TCA 72 bp ACCATACAGGCACAGTGCAAGGGCTTCAGTGTGCCATaGGTGCAGTTCACATCTGCTCCCTTATCATCAGGC +
Preference number: 6 (lower is better)
Translates to: TIQAQCKGFSVP*VQFTSAPLSSG
Trigger: GCCTGATGATAAGGGAGCAGATGTGAACTGCACTCATGGCACACTGAAGCCCTTGCACTGTGCCTGTATGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539865.5
CDS GCA 72 bp ACATACTGGAACTCATCAAGGCTCAAGGTGTTCACATaGTCCAAACTGCCGAATTGCTGGGCTGAGGTGGGG +
Preference number: 6 (lower is better)
Translates to: TYWNSSRLKVFT*SKLPNCWAEVG
Trigger: CCCCACCTCAGCCCAGCAATTCGGCAGTTTGGAGCATGTGAACACCTTGAGCCTTGATGAGTTCCAGTATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317697.8
ENST00000535988.3
ENST00000536071.5
ENST00000536953.5
ENST00000539464.5
ENST00000629941.1
CDS GCA 72 bp AAGCTTGCATGGTTACCCACTACCTTTGCTATGCAGTaGTCTGAACAGGAGGGTCAGCAAGCAACTCCCAGG +
Preference number: 6 (lower is better)
Translates to: KLAWLPTTFAMQ*SEQEGQQATPR
Trigger: CCTGGGAGTTGCTTGCTGACCCTCCTGTTCAGAGCACTGCATAGCAAAGGTAGTGGGTAACCATGCAAGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539528.5
CDS GCA 72 bp TACAGGCACAGTGCAAGGGCTTCAGTGTGCCATGAGTaGAGTTCACATCTGCTCCCTTATCATCAGGCAGGA +
Preference number: 6 (lower is better)
Translates to: YRHSARASVCHE*SSHLLPYHQAG
Trigger: TCCTGCCTGATGATAAGGGAGCAGATGTGAACTGCACTCATGGCACACTGAAGCCCTTGCACTGTGCCTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539865.5
CDS CCA 72 bp CACATAGCTGCGGGTCTCTGGCCACCTCTCGTGGCATaGTGCCATTTTTCCTCAATTCAAAGTGTCCAACAG +
Preference number: 6 (lower is better)
Translates to: HIAAGLWPPLVA*CHFSSIQSVQQ
Trigger: CTGTTGGACACTTTGAATTGAGGAAAAATGGCACCATGCCACGAGAGGTGGCCAGAGACCCGCAGCTATGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317697.8
ENST00000536549.5
ENST00000536938.1
ENST00000537754.1
CDS CAA 72 bp CAGGGTTCGGGTCTTGGTCCCTTGGCTCTCAAATGTTaGACCTGGAACTTGACTGGACCAGCCAAACTGCTT +
Preference number: 6 (lower is better)
Translates to: QGSGLGPLALKC*TWNLTGPAKLL
Trigger: AAGCAGTTTGGCTGGTCCAGTCAAGTTCCAGGTCAAACATTTGAGAGCCAAGGGACCAAGACCCGAACCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539503.5
CDS CAA 90 bp AAGACAGGACAGCAGCAAAGAAGCTTGCATGGTTACCCACTACCTTaGCTATGCAGTGCTCTGAACAGGAGGGTCAGCAAGCAACTCCCA +
Preference number: 6 (lower is better)
Translates to: KTGQQQRSLHGYPLP*LCSALNRRVSKQLP
Trigger: TGGGAGTTGCTTGCTGACCCTCCTGTTCAGAGCACTGCATAGCAAAGGTAGTGGGTAACCATGCAAGCTTCTTTGCTGCTGTCCTGTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539528.5
CDS CAA 90 bp GGTTCGGGTCTTGGTCCCTTGGCTCTCAAATGTTTGACCTGGAACTaGACTGGACCAGCCAAACTGCTTGATCTCTGCACATGTTTCCCA +
Preference number: 6 (lower is better)
Translates to: GSGLGPLALKCLTWN*TGPAKLLDLCTCFP
Trigger: TGGGAAACATGTGCAGAGATCAAGCAGTTTGGCTGGTCCAGTCAAGTTCCAGGTCAAACATTTGAGAGCCAAGGGACCAAGACCCGAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539503.5
CDS GCA 72 bp AGAAGACAACTTCAGTCAGTGTGTTCAGCTCTGGCTTaGCCAGCAGGACAGAATTCAGAACTGAGTCCAGGG +
Preference number: 6 (lower is better)
Translates to: RRQLQSVCSALA*PAGQNSELSPG
Trigger: CCCTGGACTCAGTTCTGAATTCTGTCCTGCTGGGCAAGCCAGAGCTGAACACACTGACTGAAGTTGTCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536938.1
CDS CCA 72 bp GTTCACATCTGCTCCCTTATCATCAGGCAGGAAAGCTaGACCAGCAATCCACTTTCTATGGCCACCATGCTC +
Preference number: 6 (lower is better)
Translates to: VHICSLIIRQES*TSNPLSMATML
Trigger: GAGCATGGTGGCCATAGAAAGTGGATTGCTGGTCCAGCTTTCCTGCCTGATGATAAGGGAGCAGATGTGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539865.5
CDS CCA 72 bp TCGGGTCTTGGTCCCTTGGCTCTCAAATGTTTGACCTaGAACTTGACTGGACCAGCCAAACTGCTTGATCTC +
Preference number: 6 (lower is better)
Translates to: SGLGPLALKCLT*NLTGPAKLLDL
Trigger: GAGATCAAGCAGTTTGGCTGGTCCAGTCAAGTTCCAGGTCAAACATTTGAGAGCCAAGGGACCAAGACCCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539503.5
CDS CAA 72 bp CAGCAGCAAAGAAGCTTGCATGGTTACCCACTACCTTaGCTATGCAGTGCTCTGAACAGGAGGGTCAGCAAG +
Preference number: 6 (lower is better)
Translates to: QQQRSLHGYPLP*LCSALNRRVSK
Trigger: CTTGCTGACCCTCCTGTTCAGAGCACTGCATAGCAAAGGTAGTGGGTAACCATGCAAGCTTCTTTGCTGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539528.5
CDS GCA 72 bp CAAAGAAGCTTGCATGGTTACCCACTACCTTTGCTATaGAGTGCTCTGAACAGGAGGGTCAGCAAGCAACTC +
Preference number: 6 (lower is better)
Translates to: QRSLHGYPLPLL*SALNRRVSKQL
Trigger: GAGTTGCTTGCTGACCCTCCTGTTCAGAGCACTGCATAGCAAAGGTAGTGGGTAACCATGCAAGCTTCTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539528.5
CDS CCA 72 bp CAAAGCACTGGAAACCTTATCATCAGGCAGGAAAGCTaGACCAGCAATCCACTTTCTATGGCCACCATGCTC +
Preference number: 6 (lower is better)
Translates to: QSTGNLIIRQES*TSNPLSMATML
Trigger: GAGCATGGTGGCCATAGAAAGTGGATTGCTGGTCCAGCTTTCCTGCCTGATGATAAGGTTTCCAGTGCTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539464.5
ENST00000540143.5
ENST00000629941.1
CDS CAA 72 bp CTTGGTCCCTTGGCTCTCAAATGTTTGACCTGGAACTaGACTGGACCAGCCAAACTGCTTGATCTCTGCACA +
Preference number: 6 (lower is better)
Translates to: LGPLALKCLTWN*TGPAKLLDLCT
Trigger: TGTGCAGAGATCAAGCAGTTTGGCTGGTCCAGTCAAGTTCCAGGTCAAACATTTGAGAGCCAAGGGACCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539503.5
CDS TCA 72 bp TTTGACCTGGAACTTGACTGGACCAGCCAAACTGCTTaGTCTCTGCACATGTTTCCCATGGCCTTTTGTGCT +
Preference number: 6 (lower is better)
Translates to: FDLELDWTSQTA*SLHMFPMAFCA
Trigger: AGCACAAAAGGCCATGGGAAACATGTGCAGAGATCAAGCAGTTTGGCTGGTCCAGTCAAGTTCCAGGTCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539503.5
CDS CAA 72 bp CTACATTATCATGTGGGAAGGAACGGATGGCAGCAATaGTTCGGATTAAGCGCTCGGAGAGAGAGTATTTGC +
Preference number: 6 (lower is better)
Translates to: LHYHVGRNGWQQ*FGLSARRESIC
Trigger: GCAAATACTCTCTCTCCGAGCGCTTAATCCGAACAATTGCTGCCATCCGTTCCTTCCCACATGATAATGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000317697.8
ENST00000535055.5
ENST00000535988.3
ENST00000536071.5
ENST00000536549.5
ENST00000536953.5
ENST00000539464.5
ENST00000539503.5
ENST00000539528.5
ENST00000539865.5
ENST00000540143.5
ENST00000540212.5
ENST00000540782.1
ENST00000545791.5
ENST00000548228.1
ENST00000629941.1
CDS TCA 72 bp GTTCGGATTAAGCGCTCGGAGAGAGAGTATTTGCTCTaGATGCTCTGCATAATATACCACATACTGGAACTC +
Preference number: 6 (lower is better)
Translates to: VRIKRSEREYLL*MLCIIYHILEL
Trigger: GAGTTCCAGTATGTGGTATATTATGCAGAGCATTCAGAGCAAATACTCTCTCTCCGAGCGCTTAATCCGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000317697.8
ENST00000535055.5
ENST00000535988.3
ENST00000536071.5
ENST00000536549.5
ENST00000536953.5
ENST00000539464.5
ENST00000539503.5
ENST00000539528.5
ENST00000539865.5
ENST00000540143.5
ENST00000540212.5
ENST00000540782.1
ENST00000545791.5
ENST00000548228.1
ENST00000629941.1
CDS GCA 72 bp ACTCATCAAGGCTCAAGGTGTTCACATGCTCCAAACTaGCTGAAACAAAGAAGTTTTCGGCATATACAATAT +
Preference number: 6 (lower is better)
Translates to: THQGSRCSHAPN*LKQRSFRHIQY
Trigger: ATATTGTATATGCCGAAAACTTCTTTGTTTCAGGCAGTTTGGAGCATGTGAACACCTTGAGCCTTGATGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548228.1