RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ASB4 (Homo sapiens)

Ensembl gene IDs: ENSG00000005981

Ensembl transcript IDs: ENST00000257621.4, ENST00000325885.6, ENST00000428113.5

Found 238 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CAAGTCAGTGCATCACAAGCTTTGCTGCTAGAATACGCCTTAAGATaGAGGGCAGCAAGCAATCCTCCAATTGTTCCAGGGTGTGATCTT +
Preference number: 1 (lower is better)
Translates to: QVSASQALLLEYALR*RAASNPPIVPGCDL
Trigger: AAGATCACACCCTGGAACAATTGGAGGATTGCTTGCTGCCCTGCATCTTAAGGCGTATTCTAGCAGCAAAGCTTGTGATGCACTGACTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325885.6
3UTR GCA 90 bp TCACCTTTCTGGCAGACTTACCTCAGTCCCTCAGGAAGCCACCAGTaGACTGGTGTTCACACAAGGCAAAACAAATTATTTGCTACTCTT +
Preference number: 1 (lower is better)
Translates to: SPFWQTYLSPSGSHQ*TGVHTRQNKLFATL
Trigger: AAGAGTAGCAAATAATTTGTTTTGCCTTGTGTGAACACCAGTGCACTGGTGGCTTCCTGAGGGACTGAGGTAAGTCTGCCAGAAAGGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428113.5
3UTR CCA 90 bp GGAAGGCAGGAGTCACATGGGACTCATCTTTGCATCTCCAGTCTCTaGCTCAGTGATGTCTGGTTCAAATGTCCATTCTTGACTATTAAC +
Preference number: 1 (lower is better)
Translates to: GRQESHGTHLCISSL*LSDVWFKCPFLTIN
Trigger: GTTAATAGTCAAGAATGGACATTTGAACCAGACATCACTGAGCCAGAGACTGGAGATGCAAAGATGAGTCCCATGTGACTCCTGCCTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325885.6
3UTR CCA 90 bp TTTCTGGCAGACTTACCTCAGTCCCTCAGGAAGCCACCAGTGCACTaGTGTTCACACAAGGCAAAACAAATTATTTGCTACTCTTTTTCT +
Preference number: 1 (lower is better)
Translates to: FLADLPQSLRKPPVH*CSHKAKQIICYSFS
Trigger: AGAAAAAGAGTAGCAAATAATTTGTTTTGCCTTGTGTGAACACCAGTGCACTGGTGGCTTCCTGAGGGACTGAGGTAAGTCTGCCAGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428113.5
3UTR TCA 90 bp AATCGGGTGGCCCTTTCATGGCTACAAGCTAATTTCAAAGCAGGCTaGGTCATCTTTAGATCAGTCATTCTGTTTAAAAGATGGCAAATG +
Preference number: 1 (lower is better)
Translates to: NRVALSWLQANFKAG*VIFRSVILFKRWQM
Trigger: CATTTGCCATCTTTTAAACAGAATGACTGATCTAAAGATGACTCAGCCTGCTTTGAAATTAGCTTGTAGCCATGAAAGGGCCACCCGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428113.5
3UTR GCA 90 bp AAAGTCTCTCTATTTACTTTTCGTAGCCCACTGTCACTAGCAAAGTaGTCCTTATCTCTTAGCTACAATGCTATGAAATGTCAGTCTGCT +
Preference number: 1 (lower is better)
Translates to: KVSLFTFRSPLSLAK*SLSLSYNAMKCQSA
Trigger: AGCAGACTGACATTTCATAGCATTGTAGCTAAGAGATAAGGAGCACTTTGCTAGTGACAGTGGGCTACGAAAAGTAAATAGAGAGACTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325885.6
3UTR CCA 90 bp CATGCACTGGAGCCATTGAGTGTGCAATATTTTTCTCAAGGAGTCTaGGAAAGTATTAATACTAACCAAGAAACCATACCAAAAAGACAC +
Preference number: 1 (lower is better)
Translates to: HALEPLSVQYFSQGV*ESINTNQETIPKRH
Trigger: GTGTCTTTTTGGTATGGTTTCTTGGTTAGTATTAATACTTTCCCAGACTCCTTGAGAAAAATATTGCACACTCAATGGCTCCAGTGCATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000325885.6
3UTR GCA 90 bp CAGTTCAGAAGCACAGTCTCAACTGAGATTAACCAGTTAGGTGATTaGCAGTTAACATTAAATGATAGCCTATTGGAATATCTGACATCA +
Preference number: 1 (lower is better)
Translates to: QFRSTVSTEINQLGD*QLTLNDSLLEYLTS
Trigger: TGATGTCAGATATTCCAATAGGCTATCATTTAATGTTAACTGGCAATCACCTAACTGGTTAATCTCAGTTGAGACTGTGCTTCTGAACTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325885.6
3UTR CAA 90 bp CCTCAGCATCAGTTTTACTTGCCCCAAGTCAGTGCATCACAAGCTTaGCTGCTAGAATACGCCTTAAGATGCAGGGCAGCAAGCAATCCT +
Preference number: 2 (lower is better)
Translates to: PQHQFYLPQVSASQA*LLEYALRCRAASNP
Trigger: AGGATTGCTTGCTGCCCTGCATCTTAAGGCGTATTCTAGCAGCAAAGCTTGTGATGCACTGACTTGGGGCAAGTAAAACTGATGCTGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325885.6
3UTR-3UTR CCA 90 bp TCACAAGCTTTGCTGCTAGAATACGCCTTAAGATGCAGGGCAGCAAGCAATCCTTGCATCTCCAGTCTCTaGCTCAGTGATGTCTGGTTC +
Preference number: 2 (lower is better)
Translates to: SQALLLEYALRCRAASNPCISSL*LSDVWF
Trigger: GAACCAGACATCACTGAGCCAGAGACTGGAGATGCA...AGGATTGCTTGCTGCCCTGCATCTTAAGGCGTATTCTAGCAGCAAAGCTTGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325885.6
3UTR-3UTR TCA 90 bp CTAGCAAAGTGCTCCTTATCTCTTAGCTACAATGCTATGAAATGTCAGTCTGCTTCCTCTGCTAAATGGTaGGATCCTGGAAGGCAGGAG +
Preference number: 2 (lower is better)
Translates to: LAKCSLSLSYNAMKCQSASSAKW*DPGRQE
Trigger: CTCCTGCCTTCCAGGATCTCACCATTTAGCAGAGGA...AGCAGACTGACATTTCATAGCATTGTAGCTAAGAGATAAGGAGCACTTTGCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325885.6
3UTR-3UTR CCA 90 bp AGCAGTGTACACTGTACCCAATATGTAGTCTTTTATCCCTCACCCCACTCTCAATGGCTCAGTGATGTCTaGTTCAAATGTCCATTCTTG +
Preference number: 2 (lower is better)
Translates to: SSVHCTQYVVFYPSPHSQWLSDV*FKCPFL
Trigger: CAAGAATGGACATTTGAACCAGACATCACTGAGCCA...TTGAGAGTGGGGTGAGGGATAAAAGACTACATATTGGGTACAGTGTACACTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325885.6
3UTR-3UTR TCA 90 bp GAGTCATCTTTAGATCAGTCATTCTGTTTAAAAGATGGCAAATGTATGCCTGTCAAACCTAGACTAGGATaGGATGAGGAGACAGCTAGG +
Preference number: 2 (lower is better)
Translates to: ESSLDQSFCLKDGKCMPVKPRLG*DEETAR
Trigger: CCTAGCTGTCTCCTCATCTCATCCTAGTCTAGGTTT...GACAGGCATACATTTGCCATCTTTTAAACAGAATGACTGATCTAAAGATGACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428113.5
3UTR-3UTR GCA 90 bp CATTCTTTAGTGGTGAATTTTGAGATTTTAGTGCACCCATCACTGGAGCAGTGTCTGTCACTAGCAAAGTaGTCCTTATCTCTTAGCTAC +
Preference number: 2 (lower is better)
Translates to: HSLVVNFEILVHPSLEQCLSLAK*SLSLSY
Trigger: GTAGCTAAGAGATAAGGAGCACTTTGCTAGTGACAG...ACACTGCTCCAGTGATGGGTGCACTAAAATCTCAAAATTCACCACTAAAGAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325885.6
3UTR-3UTR TCA 90 bp CTAGCAAAGTGCTCCTTATCTCTTAGCTACAATGCTATGAAATGTCAGTCTGCTAAGATCTCCTTGTTTTaGCTATGCTCATATGCCTTC +
Preference number: 2 (lower is better)
Translates to: LAKCSLSLSYNAMKCQSAKISLF*LCSYAF
Trigger: GAAGGCATATGAGCATAGTCAAAACAAGGAGATCTT...AGCAGACTGACATTTCATAGCATTGTAGCTAAGAGATAAGGAGCACTTTGCTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325885.6
3UTR-3UTR TCA 90 bp CATTCTTTAGTGGTGAATTTTGAGATTTTAGTGCACCCATCACTGGAGCAGTGTGCTCCCACTTATAAGTaGGAACATATGGTATTTCAC +
Preference number: 2 (lower is better)
Translates to: HSLVVNFEILVHPSLEQCAPTYK*EHMVFH
Trigger: GTGAAATACCATATGTTCTCACTTATAAGTGGGAGC...ACACTGCTCCAGTGATGGGTGCACTAAAATCTCAAAATTCACCACTAAAGAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325885.6
3UTR-3UTR CCA 90 bp GAAATAAACTTGAGTAGCTTGGTTTGGGGAGTAGGAGTTTGCAAAACTAGTGACCAGAATTATATTGGTTaGAAGAAAACCTGGGTCCCA +
Preference number: 2 (lower is better)
Translates to: EINLSSLVWGVGVCKTSDQNYIG*KKTWVP
Trigger: TGGGACCCAGGTTTTCTTCCAACCAATATAATTCTG...GTCACTAGTTTTGCAAACTCCTACTCCCCAAACCAAGCTACTCAAGTTTATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000325885.6
3UTR-3UTR CCA 90 bp CATTCTTTAGTGGTGAATTTTGAGATTTTAGTGCACCCATCACTGGAGCAGTGTGGCACAGAATTATATTaGTTGGAAGAAAACCTGGGT +
Preference number: 2 (lower is better)
Translates to: HSLVVNFEILVHPSLEQCGTELY*LEENLG
Trigger: ACCCAGGTTTTCTTCCAACCAATATAATTCTGTGCC...ACACTGCTCCAGTGATGGGTGCACTAAAATCTCAAAATTCACCACTAAAGAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000325885.6
3UTR-3UTR CCA 90 bp GTCATCTTTAGATCAGTCATTCTGTTTAAAAGATGGCAAATGTATGCCTGTCTAAAGCCACCAGTGCACTaGTGTTCACACAAGGCAAAA +
Preference number: 2 (lower is better)
Translates to: VIFRSVILFKRWQMYACLKPPVH*CSHKAK
Trigger: TTTTGCCTTGTGTGAACACCAGTGCACTGGTGGCTT...TAGACAGGCATACATTTGCCATCTTTTAAACAGAATGACTGATCTAAAGATGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428113.5
3UTR-3UTR GCA 90 bp GGTGATTGCCAGTTAACATTAAATGATAGCCTATTGGAATATCTGACATCATCTCTGCACCTGTACTCTTaGCCCATCACTTTATATTGC +
Preference number: 2 (lower is better)
Translates to: GDCQLTLNDSLLEYLTSSLHLYS*PITLYC
Trigger: GCAATATAAAGTGATGGGGCAAGAGTACAGGTGCAG...AGATGATGTCAGATATTCCAATAGGCTATCATTTAATGTTAACTGGCAATCACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325885.6
3UTR-3UTR GCA 90 bp TTTCATGGCTACAAGCTAATTTCAAAGCAGGCTGAGTCATCTTTAGATCAGTCAAAGATGGCAAATGTATaGCTGTCTAACACTATTCAC +
Preference number: 2 (lower is better)
Translates to: FHGYKLISKQAESSLDQSKMANV*LSNTIH
Trigger: GTGAATAGTGTTAGACAGGCATACATTTGCCATCTT...TGACTGATCTAAAGATGACTCAGCCTGCTTTGAAATTAGCTTGTAGCCATGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428113.5
3UTR-3UTR GCA 90 bp CAAGCAATCCTCCAATTGTTCCAGGGTGTGATCTTGTTTTACTTTGTTAATTATTGGGGAGTAGGAGTTTaGAAAACTAGTGACAGTAAT +
Preference number: 2 (lower is better)
Translates to: QAILQLFQGVILFYFVNYWGVGV*KTSDSN
Trigger: ATTACTGTCACTAGTTTTGCAAACTCCTACTCCCCA...ATAATTAACAAAGTAAAACAAGATCACACCCTGGAACAATTGGAGGATTGCTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000325885.6
3UTR CAA 90 bp ACACCAAGTTTAAGAGGCCAATTGCAAAGCCTGCTATATGGCCATTaGAATGAGAATGTAAACATATTACTGATAAGGCACAGAATTATA +
Preference number: 2 (lower is better)
Translates to: TPSLRGQLQSLLYGH*NENVNILLIRHRII
Trigger: TATAATTCTGTGCCTTATCAGTAATATGTTTACATTCTCATTCAAATGGCCATATAGCAGGCTTTGCAATTGGCCTCTTAAACTTGGTGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325885.6
3UTR CAA 90 bp ATTAACCAGTTAGGTGATTGCCAGTTAACATTAAATGATAGCCTATaGGAATATCTGACATCATCTCTATTCAACACTCCAGCATCCAAA +
Preference number: 2 (lower is better)
Translates to: INQLGDCQLTLNDSL*EYLTSSLFNTPASK
Trigger: TTTGGATGCTGGAGTGTTGAATAGAGATGATGTCAGATATTCCAATAGGCTATCATTTAATGTTAACTGGCAATCACCTAACTGGTTAAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325885.6
3UTR-3UTR TCA 90 bp CAAGCAATCCTCCAATTGTTCCAGGGTGTGATCTTGTTTTACTTTGTTAATTATTTAGCTACAATGCTATaGAATGTCAGTCTGCTACAT +
Preference number: 2 (lower is better)
Translates to: QAILQLFQGVILFYFVNYLATML*NVSLLH
Trigger: ATGTAGCAGACTGACATTTCATAGCATTGTAGCTAA...ATAATTAACAAAGTAAAACAAGATCACACCCTGGAACAATTGGAGGATTGCTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325885.6
3UTR-3UTR GCA 90 bp CAAGCAATCCTCCAATTGTTCCAGGGTGTGATCTTGTTTTACTTTGTTAATTATTATGAAATGTCAGTCTaGTACATAAAAAGACCGAAG +
Preference number: 2 (lower is better)
Translates to: QAILQLFQGVILFYFVNYYEMSV*YIKRPK
Trigger: CTTCGGTCTTTTTATGTAGCAGACTGACATTTCATA...ATAATTAACAAAGTAAAACAAGATCACACCCTGGAACAATTGGAGGATTGCTTG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325885.6
3UTR-3UTR GCA 90 bp GGTGATTGCCAGTTAACATTAAATGATAGCCTATTGGAATATCTGACATCATCTCTACATTTTTCTTTCTaGAATCCACTAACTAGCAAG +
Preference number: 2 (lower is better)
Translates to: GDCQLTLNDSLLEYLTSSLHFSF*NPLTSK
Trigger: CTTGCTAGTTAGTGGATTGCAGAAAGAAAAATGTAG...AGATGATGTCAGATATTCCAATAGGCTATCATTTAATGTTAACTGGCAATCACC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325885.6
3UTR GCA 72 bp GATCCTGGAAGGCAGGAGTCACATGGGACTCATCTTTaGATCTCCAGTCTCTGGCTCAGTGATGTCTGGTTC +
Preference number: 3 (lower is better)
Translates to: DPGRQESHGTHL*ISSLWLSDVWF
Trigger: GAACCAGACATCACTGAGCCAGAGACTGGAGATGCAAAGATGAGTCCCATGTGACTCCTGCCTTCCAGGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325885.6
3UTR TCA 72 bp TTAGCTGTGTGTATGTCTGGATCCTCTGCTAAATGGTaGGATCCTGGAAGGCAGGAGTCACATGGGACTCAT +
Preference number: 3 (lower is better)
Translates to: LAVCMSGSSAKW*DPGRQESHGTH
Trigger: ATGAGTCCCATGTGACTCCTGCCTTCCAGGATCTCACCATTTAGCAGAGGATCCAGACATACACACAGCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325885.6
3UTR CCA 72 bp GACTTACCTCAGTCCCTCAGGAAGCCACCAGTGCACTaGTGTTCACACAAGGCAAAACAAATTATTTGCTAC +
Preference number: 3 (lower is better)
Translates to: DLPQSLRKPPVH*CSHKAKQIICY
Trigger: GTAGCAAATAATTTGTTTTGCCTTGTGTGAACACCAGTGCACTGGTGGCTTCCTGAGGGACTGAGGTAAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428113.5
3UTR-3UTR CAA 90 bp AGCAGTGTACACTGTACCCAATATGTAGTCTTTTATCCCTCACCCCACTCTCAATTTTCCTATGCTTCCTaGTCACATGCACTGGAGCCA +
Preference number: 3 (lower is better)
Translates to: SSVHCTQYVVFYPSPHSQFSYAS*SHALEP
Trigger: TGGCTCCAGTGCATGTGACAAGGAAGCATAGGAAAA...TTGAGAGTGGGGTGAGGGATAAAAGACTACATATTGGGTACAGTGTACACTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000325885.6
3UTR-3UTR CAA 90 bp TCACAAGCTTTGCTGCTAGAATACGCCTTAAGATGCAGGGCAGCAAGCAATCCTGGGTACAGGTGGTTTTaGGTTACATGGATACATTCT +
Preference number: 3 (lower is better)
Translates to: SQALLLEYALRCRAASNPGYRWF*VTWIHS
Trigger: AGAATGTATCCATGTAACCAAAAACCACCTGTACCC...AGGATTGCTTGCTGCCCTGCATCTTAAGGCGTATTCTAGCAGCAAAGCTTGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325885.6
3UTR-3UTR CAA 90 bp TCACAAGCTTTGCTGCTAGAATACGCCTTAAGATGCAGGGCAGCAAGCAATCCTATCACTGAAATAAACTaGAGTAGCTTGGTTTGGGGA +
Preference number: 3 (lower is better)
Translates to: SQALLLEYALRCRAASNPITEIN*SSLVWG
Trigger: TCCCCAAACCAAGCTACTCAAGTTTATTTCAGTGAT...AGGATTGCTTGCTGCCCTGCATCTTAAGGCGTATTCTAGCAGCAAAGCTTGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325885.6
3UTR-3UTR CAA 90 bp AGCAGTGTACACTGTACCCAATATGTAGTCTTTTATCCCTCACCCCACTCTCAATCTGCACCTGTACTCTaGCCCCATCACTTTATATTG +
Preference number: 3 (lower is better)
Translates to: SSVHCTQYVVFYPSPHSQSAPVL*PHHFIL
Trigger: CAATATAAAGTGATGGGGCAAGAGTACAGGTGCAGA...TTGAGAGTGGGGTGAGGGATAAAAGACTACATATTGGGTACAGTGTACACTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000325885.6
3UTR TCA 72 bp CTCTCACACCCAATTTCAAGCAAACCTAGACTAGGATaGGATGAGGAGACAGCTAGGATTAGGTATGTAATG +
Preference number: 3 (lower is better)
Translates to: LSHPISSKPRLG*DEETARIRYVM
Trigger: CATTACATACCTAATCCTAGCTGTCTCCTCATCTCATCCTAGTCTAGGTTTGCTTGAAATTGGGTGTGAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428113.5
3UTR-3UTR CAA 90 bp CTAGCAAAGTGCTCCTTATCTCTTAGCTACAATGCTATGAAATGTCAGTCTGCTAGTTTAAGAGGCCAATaGCAAAGCCTGCTATATGGC +
Preference number: 3 (lower is better)
Translates to: LAKCSLSLSYNAMKCQSASLRGQ*QSLLYG
Trigger: GCCATATAGCAGGCTTTGCAATTGGCCTCTTAAACT...AGCAGACTGACATTTCATAGCATTGTAGCTAAGAGATAAGGAGCACTTTGCTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325885.6
3UTR-3UTR CAA 90 bp CATTCTTTAGTGGTGAATTTTGAGATTTTAGTGCACCCATCACTGGAGCAGTGTCATGCACTGGAGCCATaGAGTGTGCAATATTTTTCT +
Preference number: 3 (lower is better)
Translates to: HSLVVNFEILVHPSLEQCHALEP*SVQYFS
Trigger: AGAAAAATATTGCACACTCAATGGCTCCAGTGCATG...ACACTGCTCCAGTGATGGGTGCACTAAAATCTCAAAATTCACCACTAAAGAATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000325885.6
3UTR TCA 72 bp GCCCTTTCATGGCTACAAGCTAATTTCAAAGCAGGCTaGGTCATCTTTAGATCAGTCATTCTGTTTAAAAGA +
Preference number: 3 (lower is better)
Translates to: ALSWLQANFKAG*VIFRSVILFKR
Trigger: TCTTTTAAACAGAATGACTGATCTAAAGATGACTCAGCCTGCTTTGAAATTAGCTTGTAGCCATGAAAGGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428113.5
3UTR GCA 72 bp CTATTTACTTTTCGTAGCCCACTGTCACTAGCAAAGTaGTCCTTATCTCTTAGCTACAATGCTATGAAATGT +
Preference number: 3 (lower is better)
Translates to: LFTFRSPLSLAK*SLSLSYNAMKC
Trigger: ACATTTCATAGCATTGTAGCTAAGAGATAAGGAGCACTTTGCTAGTGACAGTGGGCTACGAAAAGTAAATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325885.6
3UTR GCA 72 bp AGCACAGTCTCAACTGAGATTAACCAGTTAGGTGATTaGCAGTTAACATTAAATGATAGCCTATTGGAATAT +
Preference number: 3 (lower is better)
Translates to: STVSTEINQLGD*QLTLNDSLLEY
Trigger: ATATTCCAATAGGCTATCATTTAATGTTAACTGGCAATCACCTAACTGGTTAATCTCAGTTGAGACTGTGCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325885.6
CDS-3UTR GCA 90 bp ACCTCAGTCCCTCAGGAAGCCACCAGTGCACTGGTGTTCACACAAGGCAAAACACGGCAGACCAGGTGGTaGTCCGTGCTGTACTCCTGC +
Preference number: 4 (lower is better)
Translates to: TSVPQEATSALVFTQGKTRQTRW*SVLYSC
Trigger: GCAGGAGTACAGCACGGAGCACCACCTGGTCTGCCG...TGTTTTGCCTTGTGTGAACACCAGTGCACTGGTGGCTTCCTGAGGGACTGAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428113.5
CDS-3UTR GCA 90 bp ACCTCAGTCCCTCAGGAAGCCACCAGTGCACTGGTGTTCACACAAGGCAAAACATGTAGTCAAGCAGCATaGGGCAGACCAGGTGGTGCT +
Preference number: 4 (lower is better)
Translates to: TSVPQEATSALVFTQGKTCSQAA*GRPGGA
Trigger: AGCACCACCTGGTCTGCCGCATGCTGCTTGACTACA...TGTTTTGCCTTGTGTGAACACCAGTGCACTGGTGGCTTCCTGAGGGACTGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428113.5
CDS-3UTR GCA 90 bp GACTTACCTCAGTCCCTCAGGAAGCCACCAGTGCACTGGTGTTCACACAAGGCAGTCACAGTTCCAGGCTaGCTTGTGGAGGGGAGATTT +
Preference number: 4 (lower is better)
Translates to: DLPQSLRKPPVHWCSHKAVTVPG*LVEGRF
Trigger: AAATCTCCCCTCCACAAGGCAGCCTGGAACTGTGAC...TGCCTTGTGTGAACACCAGTGCACTGGTGGCTTCCTGAGGGACTGAGGTAAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428113.5
CDS-3UTR CCA 90 bp CCTCAGTCCCTCAGGAAGCCACCAGTGCACTGGTGTTCACACAAGGCAAAACAATCACGCTGTCCACTATaGCCCCGTGTTCCACGTAGA +
Preference number: 4 (lower is better)
Translates to: PQSLRKPPVHWCSHKAKQSRCPL*PRVPRR
Trigger: TCTACGTGGAACACGGGGCCATAGTGGACAGCGTGA...TTGTTTTGCCTTGTGTGAACACCAGTGCACTGGTGGCTTCCTGAGGGACTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428113.5
CDS-3UTR TCA 90 bp GACTTACCTCAGTCCCTCAGGAAGCCACCAGTGCACTGGTGTTCACACAAGGCAGACAAGGCTGCCATTTaGATCTTCCTCAACCTGCTG +
Preference number: 4 (lower is better)
Translates to: DLPQSLRKPPVHWCSHKADKAAI*IFLNLL
Trigger: CAGCAGGTTGAGGAAGATTCAAATGGCAGCCTTGTC...TGCCTTGTGTGAACACCAGTGCACTGGTGGCTTCCTGAGGGACTGAGGTAAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428113.5
CDS-3UTR GCA 90 bp AGCAGTGTACACTGTACCCAATATGTAGTCTTTTATCCCTCACCCCACTCTCAACGGCAGACCAGGTGGTaGTCCGTGCTGTACTCCTGC +
Preference number: 4 (lower is better)
Translates to: SSVHCTQYVVFYPSPHSQRQTRW*SVLYSC
Trigger: GCAGGAGTACAGCACGGAGCACCACCTGGTCTGCCG...TTGAGAGTGGGGTGAGGGATAAAAGACTACATATTGGGTACAGTGTACACTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325885.6
CDS-3UTR TCA 90 bp ACCTCAGTCCCTCAGGAAGCCACCAGTGCACTGGTGTTCACACAAGGCAAAACAATTTCACAAGCCACGTaGAGAGGGGTTTTCCCATTG +
Preference number: 4 (lower is better)
Translates to: TSVPQEATSALVFTQGKTISQAT*RGVFPL
Trigger: CAATGGGAAAACCCCTCTTCACGTGGCTTGTGAAAT...TGTTTTGCCTTGTGTGAACACCAGTGCACTGGTGGCTTCCTGAGGGACTGAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000428113.5
CDS-3UTR TCA 90 bp CCTCAGTCCCTCAGGAAGCCACCAGTGCACTGGTGTTCACACAAGGCAAAACAAAAACCTAGACTAGGATaGGATGAGGAGACAGCTAGG +
Preference number: 4 (lower is better)
Translates to: PQSLRKPPVHWCSHKAKQKPRLG*DEETAR
Trigger: CCTAGCTGTCTCCTCATCTCATCCTAGTCTAGGTTT...TTGTTTTGCCTTGTGTGAACACCAGTGCACTGGTGGCTTCCTGAGGGACTGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428113.5
CDS-3UTR TCA 90 bp GAAAACACCAAGTTTAAGAGGCCAATTGCAAAGCCTGCTATATGGCCATTTGAACAGGGCGCACGGAGGTaGCCTTCAGCACGTACTGGA +
Preference number: 4 (lower is better)
Translates to: ENTKFKRPIAKPAIWPFEQGARR*PSARTG
Trigger: TCCAGTACGTGCTGAAGGTCACCTCCGTGCGCCCTG...TTCAAATGGCCATATAGCAGGCTTTGCAATTGGCCTCTTAAACTTGGTGTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325885.6
CDS-3UTR CCA 90 bp CATTCTTTAGTGGTGAATTTTGAGATTTTAGTGCACCCATCACTGGAGCAGTGTTCCGAAAGGCCGAAGTaGGCAGCCGTGTGCAAGGGC +
Preference number: 4 (lower is better)
Translates to: HSLVVNFEILVHPSLEQCSERPK*AAVCKG
Trigger: GCCCTTGCACACGGCTGCCCACTTCGGCCTTTCGGA...ACACTGCTCCAGTGATGGGTGCACTAAAATCTCAAAATTCACCACTAAAGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325885.6
CDS-3UTR TCA 90 bp TCACAAGCTTTGCTGCTAGAATACGCCTTAAGATGCAGGGCAGCAAGCAATCCTCGTCATCTCGGGCATTaGCTTCGGCTTTGTAGTCAA +
Preference number: 4 (lower is better)
Translates to: SQALLLEYALRCRAASNPRHLGH*LRLCSQ
Trigger: TTGACTACAAAGCCGAAGTCAATGCCCGAGATGACG...AGGATTGCTTGCTGCCCTGCATCTTAAGGCGTATTCTAGCAGCAAAGCTTGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325885.6
CDS-3UTR TCA 90 bp CAGGAAGCCACCAGTGCACTGGTGTTCACACAAGGCAAAACAAATTATTTGCTACCAGCATCATGTGCATaGGCACGTGGTCACAGTTCC +
Preference number: 4 (lower is better)
Translates to: QEATSALVFTQGKTNYLLPASCA*ARGHSS
Trigger: GGAACTGTGACCACGTGCTCATGCACATGATGCTGG...TAGCAAATAATTTGTTTTGCCTTGTGTGAACACCAGTGCACTGGTGGCTTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428113.5
CDS-3UTR TCA 90 bp TCACAAGCTTTGCTGCTAGAATACGCCTTAAGATGCAGGGCAGCAAGCAATCCTCAGTCTCTGGCTCAGTaGTGTCTGGTTCAAATGTCC +
Preference number: 4 (lower is better)
Translates to: SQALLLEYALRCRAASNPQSLAQ*CLVQMS
Trigger: GGACATTTGAACCAGACATCACTGAGCCAGAGACTG...AGGATTGCTTGCTGCCCTGCATCTTAAGGCGTATTCTAGCAGCAAAGCTTGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325885.6
CDS-3UTR CCA 90 bp ACCTCAGTCCCTCAGGAAGCCACCAGTGCACTGGTGTTCACACAAGGCAAAACAATTTTCCGAAGTCATTaGACTTTAGCGCCTCAAGGA +
Preference number: 4 (lower is better)
Translates to: TSVPQEATSALVFTQGKTIFRSH*TLAPQG
Trigger: TCCTTGAGGCGCTAAAGTCCAATGACTTCGGAAAAT...TGTTTTGCCTTGTGTGAACACCAGTGCACTGGTGGCTTCCTGAGGGACTGAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428113.5
CDS-3UTR CCA 90 bp CATTCTTTAGTGGTGAATTTTGAGATTTTAGTGCACCCATCACTGGAGCAGTGTATGCGGCAGACCAGGTaGTGCTCCGTGCTGTACTCC +
Preference number: 4 (lower is better)
Translates to: HSLVVNFEILVHPSLEQCMRQTR*CSVLYS
Trigger: GGAGTACAGCACGGAGCACCACCTGGTCTGCCGCAT...ACACTGCTCCAGTGATGGGTGCACTAAAATCTCAAAATTCACCACTAAAGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325885.6
CDS-3UTR CCA 90 bp AGCAGTGTACACTGTACCCAATATGTAGTCTTTTATCCCTCACCCCACTCTCAAATGTGCATGAGCACGTaGTCACAGTTCCAGGCTGCC +
Preference number: 4 (lower is better)
Translates to: SSVHCTQYVVFYPSPHSQMCMST*SQFQAA
Trigger: GGCAGCCTGGAACTGTGACCACGTGCTCATGCACAT...TTGAGAGTGGGGTGAGGGATAAAAGACTACATATTGGGTACAGTGTACACTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325885.6
CDS-3UTR CCA 90 bp AGCAGTGTACACTGTACCCAATATGTAGTCTTTTATCCCTCACCCCACTCTCAAACCTTCAGCACGTACTaGATGGCAGCACAGCCGTTG +
Preference number: 4 (lower is better)
Translates to: SSVHCTQYVVFYPSPHSQTFSTY*MAAQPL
Trigger: CAACGGCTGTGCTGCCATCCAGTACGTGCTGAAGGT...TTGAGAGTGGGGTGAGGGATAAAAGACTACATATTGGGTACAGTGTACACTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325885.6
CDS-3UTR CCA 90 bp TCTAACACTATTCACCTTTCTGGCAGACTTACCTCAGTCCCTCAGGAAGCCACCAACTGGAAAATCGGGTaGCCCTTTCATGGCTACAAG +
Preference number: 4 (lower is better)
Translates to: SNTIHLSGRLTSVPQEATNWKIG*PFHGYK
Trigger: CTTGTAGCCATGAAAGGGCCACCCGATTTTCCAGTT...GGTGGCTTCCTGAGGGACTGAGGTAAGTCTGCCAGAAAGGTGAATAGTGTTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428113.5
3UTR CAA 72 bp CAGTTTTACTTGCCCCAAGTCAGTGCATCACAAGCTTaGCTGCTAGAATACGCCTTAAGATGCAGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: QFYLPQVSASQA*LLEYALRCRAA
Trigger: TGCTGCCCTGCATCTTAAGGCGTATTCTAGCAGCAAAGCTTGTGATGCACTGACTTGGGGCAAGTAAAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325885.6
CDS-3UTR TCA 90 bp AAGCAGGCTGAGTCATCTTTAGATCAGTCATTCTGTTTAAAAGATGGCAAATGTCAGGGCGCACGGAGGTaGCCTTCAGCACGTACTGGA +
Preference number: 4 (lower is better)
Translates to: KQAESSLDQSFCLKDGKCQGARR*PSARTG
Trigger: TCCAGTACGTGCTGAAGGTCACCTCCGTGCGCCCTG...ACATTTGCCATCTTTTAAACAGAATGACTGATCTAAAGATGACTCAGCCTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428113.5
CDS-3UTR GCA 90 bp ACCTCAGTCCCTCAGGAAGCCACCAGTGCACTGGTGTTCACACAAGGCAAAACAGTGTCCACATCTATTTaGCTTTGGATCAAAATAGCC +
Preference number: 4 (lower is better)
Translates to: TSVPQEATSALVFTQGKTVSTSI*LWIKIA
Trigger: GGCTATTTTGATCCAAAGGCAAATAGATGTGGACAC...TGTTTTGCCTTGTGTGAACACCAGTGCACTGGTGGCTTCCTGAGGGACTGAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428113.5
CDS-3UTR GCA 90 bp CTAGCAAAGTGCTCCTTATCTCTTAGCTACAATGCTATGAAATGTCAGTCTGCTAAGTGGGCAGCCGTGTaGAAGGGCGTCTCCTCATCT +
Preference number: 4 (lower is better)
Translates to: LAKCSLSLSYNAMKCQSAKWAAV*KGVSSS
Trigger: AGATGAGGAGACGCCCTTGCACACGGCTGCCCACTT...AGCAGACTGACATTTCATAGCATTGTAGCTAAGAGATAAGGAGCACTTTGCTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325885.6
CDS-3UTR GCA 90 bp CATTCTTTAGTGGTGAATTTTGAGATTTTAGTGCACCCATCACTGGAGCAGTGTTCCGTGCTGTACTCCTaGTCCTTAAAGCGGAGGGCC +
Preference number: 4 (lower is better)
Translates to: HSLVVNFEILVHPSLEQCSVLYS*SLKRRA
Trigger: GGCCCTCCGCTTTAAGGAGCAGGAGTACAGCACGGA...ACACTGCTCCAGTGATGGGTGCACTAAAATCTCAAAATTCACCACTAAAGAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325885.6
CDS-3UTR GCA 90 bp TCACAAGCTTTGCTGCTAGAATACGCCTTAAGATGCAGGGCAGCAAGCAATCCTGCACATCTCGATAAGTaGATGAGAGTCCTTGGAGAG +
Preference number: 4 (lower is better)
Translates to: SQALLLEYALRCRAASNPAHLDK*MRVLGE
Trigger: CTCTCCAAGGACTCTCATGCACTTATCGAGATGTGC...AGGATTGCTTGCTGCCCTGCATCTTAAGGCGTATTCTAGCAGCAAAGCTTGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325885.6
CDS-3UTR GCA 90 bp TTTCATGGCTACAAGCTAATTTCAAAGCAGGCTGAGTCATCTTTAGATCAGTCATCCGTGCTGTACTCCTaGTCCTTAAAGCGGAGGGCC +
Preference number: 4 (lower is better)
Translates to: FHGYKLISKQAESSLDQSSVLYS*SLKRRA
Trigger: GGCCCTCCGCTTTAAGGAGCAGGAGTACAGCACGGA...TGACTGATCTAAAGATGACTCAGCCTGCTTTGAAATTAGCTTGTAGCCATGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428113.5
CDS-3UTR GCA 90 bp CCCTTTCATGGCTACAAGCTAATTTCAAAGCAGGCTGAGTCATCTTTAGATCAGGCTTCCAGCATCATGTaGATGAGCACGTGGTCACAG +
Preference number: 4 (lower is better)
Translates to: PFHGYKLISKQAESSLDQASSIM*MSTWSQ
Trigger: CTGTGACCACGTGCTCATGCACATGATGCTGGAAGC...CTGATCTAAAGATGACTCAGCCTGCTTTGAAATTAGCTTGTAGCCATGAAAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428113.5
CDS-3UTR GCA 90 bp TCACAAGCTTTGCTGCTAGAATACGCCTTAAGATGCAGGGCAGCAAGCAATCCTCTGCACCTGTACTCTTaGCCCATCACTTTATATTGC +
Preference number: 4 (lower is better)
Translates to: SQALLLEYALRCRAASNPLHLYS*PITLYC
Trigger: GCAATATAAAGTGATGGGGCAAGAGTACAGGTGCAG...AGGATTGCTTGCTGCCCTGCATCTTAAGGCGTATTCTAGCAGCAAAGCTTGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325885.6
CDS-3UTR GCA 90 bp TCACAAGCTTTGCTGCTAGAATACGCCTTAAGATGCAGGGCAGCAAGCAATCCTTCCCCCATTTTCCTATaGTTCCTTGTCACATGCACT +
Preference number: 4 (lower is better)
Translates to: SQALLLEYALRCRAASNPSPIFL*FLVTCT
Trigger: AGTGCATGTGACAAGGAAGCATAGGAAAATGGGGGA...AGGATTGCTTGCTGCCCTGCATCTTAAGGCGTATTCTAGCAGCAAAGCTTGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325885.6
CDS-3UTR CCA 90 bp GTCATCTTTAGATCAGTCATTCTGTTTAAAAGATGGCAAATGTATGCCTGTCTATCCGAAAGGCCGAAGTaGGCAGCCGTGTGCAAGGGC +
Preference number: 4 (lower is better)
Translates to: VIFRSVILFKRWQMYACLSERPK*AAVCKG
Trigger: GCCCTTGCACACGGCTGCCCACTTCGGCCTTTCGGA...TAGACAGGCATACATTTGCCATCTTTTAAACAGAATGACTGATCTAAAGATGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428113.5
CDS-3UTR CCA 90 bp CTAGCAAAGTGCTCCTTATCTCTTAGCTACAATGCTATGAAATGTCAGTCTGCTTCACGCTGTCCACTATaGCCCCGTGTTCCACGTAGA +
Preference number: 4 (lower is better)
Translates to: LAKCSLSLSYNAMKCQSASRCPL*PRVPRR
Trigger: TCTACGTGGAACACGGGGCCATAGTGGACAGCGTGA...AGCAGACTGACATTTCATAGCATTGTAGCTAAGAGATAAGGAGCACTTTGCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325885.6
CDS-3UTR CCA 90 bp GGCTACAAGCTAATTTCAAAGCAGGCTGAGTCATCTTTAGATCAGTCATTCTGTATGTGCATGAGCACGTaGTCACAGTTCCAGGCTGCC +
Preference number: 4 (lower is better)
Translates to: GYKLISKQAESSLDQSFCMCMST*SQFQAA
Trigger: GGCAGCCTGGAACTGTGACCACGTGCTCATGCACAT...ACAGAATGACTGATCTAAAGATGACTCAGCCTGCTTTGAAATTAGCTTGTAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428113.5
CDS-3UTR CCA 90 bp TCATTAAACTGGAAAATCGGGTGGCCCTTTCATGGCTACAAGCTAATTTCAAAGACCTTCAGCACGTACTaGATGGCAGCACAGCCGTTG +
Preference number: 4 (lower is better)
Translates to: SLNWKIGWPFHGYKLISKTFSTY*MAAQPL
Trigger: CAACGGCTGTGCTGCCATCCAGTACGTGCTGAAGGT...CTTTGAAATTAGCTTGTAGCCATGAAAGGGCCACCCGATTTTCCAGTTTAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428113.5
CDS-3UTR CCA 90 bp AGCAGTGTACACTGTACCCAATATGTAGTCTTTTATCCCTCACCCCACTCTCAATGCATCTCCAGTCTCTaGCTCAGTGATGTCTGGTTC +
Preference number: 4 (lower is better)
Translates to: SSVHCTQYVVFYPSPHSQCISSL*LSDVWF
Trigger: GAACCAGACATCACTGAGCCAGAGACTGGAGATGCA...TTGAGAGTGGGGTGAGGGATAAAAGACTACATATTGGGTACAGTGTACACTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325885.6
CDS-3UTR TCA 90 bp GAAAACACCAAGTTTAAGAGGCCAATTGCAAAGCCTGCTATATGGCCATTTGAATCCTCTGCTAAATGGTaGGATCCTGGAAGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: ENTKFKRPIAKPAIWPFESSAKW*DPGRQE
Trigger: CTCCTGCCTTCCAGGATCTCACCATTTAGCAGAGGA...TTCAAATGGCCATATAGCAGGCTTTGCAATTGGCCTCTTAAACTTGGTGTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325885.6
CDS-3UTR TCA 90 bp GAGTCATCTTTAGATCAGTCATTCTGTTTAAAAGATGGCAAATGTATGCCTGTCTCTTCCTCAACCTGCTaGCCACTGGGCAGAGCCTCA +
Preference number: 4 (lower is better)
Translates to: ESSLDQSFCLKDGKCMPVSSSTC*PLGRAS
Trigger: TGAGGCTCTGCCCAGTGGTCAGCAGGTTGAGGAAGA...GACAGGCATACATTTGCCATCTTTTAAACAGAATGACTGATCTAAAGATGACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428113.5
CDS-3UTR GCA 90 bp CTAGCAAAGTGCTCCTTATCTCTTAGCTACAATGCTATGAAATGTCAGTCTGCTGCTTCCAGCATCATGTaGATGAGCACGTGGTCACAG +
Preference number: 4 (lower is better)
Translates to: LAKCSLSLSYNAMKCQSAASSIM*MSTWSQ
Trigger: CTGTGACCACGTGCTCATGCACATGATGCTGGAAGC...AGCAGACTGACATTTCATAGCATTGTAGCTAAGAGATAAGGAGCACTTTGCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325885.6
CDS-3UTR GCA 90 bp TCACAAGCTTTGCTGCTAGAATACGCCTTAAGATGCAGGGCAGCAAGCAATCCTGGAAAGCAAAGGAATTaGTCTATGGCATCTGTTGTG +
Preference number: 4 (lower is better)
Translates to: SQALLLEYALRCRAASNPGKQRN*SMASVV
Trigger: CACAACAGATGCCATAGAGCAATTCCTTTGCTTTCC...AGGATTGCTTGCTGCCCTGCATCTTAAGGCGTATTCTAGCAGCAAAGCTTGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325885.6
CDS-3UTR GCA 90 bp GGCTACAAGCTAATTTCAAAGCAGGCTGAGTCATCTTTAGATCAGTCATTCTGTTCAGGAAGCCACCAGTaGACTGGTGTTCACACAAGG +
Preference number: 4 (lower is better)
Translates to: GYKLISKQAESSLDQSFCSGSHQ*TGVHTR
Trigger: CCTTGTGTGAACACCAGTGCACTGGTGGCTTCCTGA...ACAGAATGACTGATCTAAAGATGACTCAGCCTGCTTTGAAATTAGCTTGTAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428113.5
CDS-3UTR CCA 90 bp CCCTTTCATGGCTACAAGCTAATTTCAAAGCAGGCTGAGTCATCTTTAGATCAGAGAGATGGAGGCCTGTaGCCCAGGAAGACTTCAATT +
Preference number: 4 (lower is better)
Translates to: PFHGYKLISKQAESSLDQRDGGL*PRKTSI
Trigger: AATTGAAGTCTTCCTGGGCCACAGGCCTCCATCTCT...CTGATCTAAAGATGACTCAGCCTGCTTTGAAATTAGCTTGTAGCCATGAAAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428113.5
CDS-3UTR CCA 90 bp GTCATCTTTAGATCAGTCATTCTGTTTAAAAGATGGCAAATGTATGCCTGTCTAATGCGGCAGACCAGGTaGTGCTCCGTGCTGTACTCC +
Preference number: 4 (lower is better)
Translates to: VIFRSVILFKRWQMYACLMRQTR*CSVLYS
Trigger: GGAGTACAGCACGGAGCACCACCTGGTCTGCCGCAT...TAGACAGGCATACATTTGCCATCTTTTAAACAGAATGACTGATCTAAAGATGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428113.5
CDS-3UTR CCA 90 bp ACGTTAGCTTTCATTAAACTGGAAAATCGGGTGGCCCTTTCATGGCTACAAGCTCACTATTCACCTTTCTaGCAGACTTACCTCAGTCCC +
Preference number: 4 (lower is better)
Translates to: TLAFIKLENRVALSWLQAHYSPF*QTYLSP
Trigger: GGGACTGAGGTAAGTCTGCCAGAAAGGTGAATAGTG...AGCTTGTAGCCATGAAAGGGCCACCCGATTTTCCAGTTTAATGAAAGCTAACGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428113.5
CDS-3UTR TCA 90 bp TCACAAGCTTTGCTGCTAGAATACGCCTTAAGATGCAGGGCAGCAAGCAATCCTTATTGTATCCACCTATaGCTTTTCTTACACAGCCCT +
Preference number: 4 (lower is better)
Translates to: SQALLLEYALRCRAASNPYCIHL*LFLHSP
Trigger: AGGGCTGTGTAAGAAAAGTCATAGGTGGATACAATA...AGGATTGCTTGCTGCCCTGCATCTTAAGGCGTATTCTAGCAGCAAAGCTTGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325885.6
CDS-3UTR GCA 90 bp TCACAAGCTTTGCTGCTAGAATACGCCTTAAGATGCAGGGCAGCAAGCAATCCTTGGGGAGTAGGAGTTTaGAAAACTAGTGACAGTAAT +
Preference number: 4 (lower is better)
Translates to: SQALLLEYALRCRAASNPWGVGV*KTSDSN
Trigger: ATTACTGTCACTAGTTTTGCAAACTCCTACTCCCCA...AGGATTGCTTGCTGCCCTGCATCTTAAGGCGTATTCTAGCAGCAAAGCTTGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325885.6
CDS-3UTR GCA 90 bp CATTCTTTAGTGGTGAATTTTGAGATTTTAGTGCACCCATCACTGGAGCAGTGTCATGGGACTCATCTTTaGATCTCCAGTCTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: HSLVVNFEILVHPSLEQCHGTHL*ISSLWL
Trigger: GAGCCAGAGACTGGAGATGCAAAGATGAGTCCCATG...ACACTGCTCCAGTGATGGGTGCACTAAAATCTCAAAATTCACCACTAAAGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325885.6
CDS-3UTR CCA 90 bp GAAAACACCAAGTTTAAGAGGCCAATTGCAAAGCCTGCTATATGGCCATTTGAAAGAGATGGAGGCCTGTaGCCCAGGAAGACTTCAATT +
Preference number: 4 (lower is better)
Translates to: ENTKFKRPIAKPAIWPFERDGGL*PRKTSI
Trigger: AATTGAAGTCTTCCTGGGCCACAGGCCTCCATCTCT...TTCAAATGGCCATATAGCAGGCTTTGCAATTGGCCTCTTAAACTTGGTGTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325885.6
CDS-3UTR CCA 90 bp GAAAACACCAAGTTTAAGAGGCCAATTGCAAAGCCTGCTATATGGCCATTTGAACACCTTATGGAACTGTaGAGGGTATATTCGGGCAGC +
Preference number: 4 (lower is better)
Translates to: ENTKFKRPIAKPAIWPFEHLMEL*RVYSGS
Trigger: GCTGCCCGAATATACCCTCCACAGTTCCATAAGGTG...TTCAAATGGCCATATAGCAGGCTTTGCAATTGGCCTCTTAAACTTGGTGTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325885.6
CDS-3UTR CCA 90 bp GGCTACAAGCTAATTTCAAAGCAGGCTGAGTCATCTTTAGATCAGTCATTCTGTCACCTTATGGAACTGTaGAGGGTATATTCGGGCAGC +
Preference number: 4 (lower is better)
Translates to: GYKLISKQAESSLDQSFCHLMEL*RVYSGS
Trigger: GCTGCCCGAATATACCCTCCACAGTTCCATAAGGTG...ACAGAATGACTGATCTAAAGATGACTCAGCCTGCTTTGAAATTAGCTTGTAGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428113.5
CDS-3UTR CCA 90 bp AGCAGTGTACACTGTACCCAATATGTAGTCTTTTATCCCTCACCCCACTCTCAAAAGTTTTCATTTCCCTaGGCGAGGAACATCTTCTCC +
Preference number: 4 (lower is better)
Translates to: SSVHCTQYVVFYPSPHSQKFSFP*ARNIFS
Trigger: GGAGAAGATGTTCCTCGCCCAGGGAAATGAAAACTT...TTGAGAGTGGGGTGAGGGATAAAAGACTACATATTGGGTACAGTGTACACTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000325885.6
CDS-3UTR CCA 90 bp ATTAGGTATGTAATGGAAGGTCAAAGAGGATCAGAGGTAGTTAGCCCAGGACTCCAGAGCCTCACCTTATaGAACTGTGGAGGGTATATT +
Preference number: 4 (lower is better)
Translates to: IRYVMEGQRGSEVVSPGLQSLTL*NCGGYI
Trigger: AATATACCCTCCACAGTTCCATAAGGTGAGGCTCTG...GAGTCCTGGGCTAACTACCTCTGATCCTCTTTGACCTTCCATTACATACCTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428113.5
CDS-3UTR TCA 90 bp CTAGCAAAGTGCTCCTTATCTCTTAGCTACAATGCTATGAAATGTCAGTCTGCTATTTCACAAGCCACGTaGAGAGGGGTTTTCCCATTG +
Preference number: 4 (lower is better)
Translates to: LAKCSLSLSYNAMKCQSAISQAT*RGVFPL
Trigger: CAATGGGAAAACCCCTCTTCACGTGGCTTGTGAAAT...AGCAGACTGACATTTCATAGCATTGTAGCTAAGAGATAAGGAGCACTTTGCTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325885.6
CDS-3UTR TCA 90 bp CAAGCAATCCTCCAATTGTTCCAGGGTGTGATCTTGTTTTACTTTGTTAATTATCCAGCATCATGTGCATaGGCACGTGGTCACAGTTCC +
Preference number: 4 (lower is better)
Translates to: QAILQLFQGVILFYFVNYPASCA*ARGHSS
Trigger: GGAACTGTGACCACGTGCTCATGCACATGATGCTGG...ATAATTAACAAAGTAAAACAAGATCACACCCTGGAACAATTGGAGGATTGCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325885.6
CDS-3UTR TCA 90 bp TCACAAGCTTTGCTGCTAGAATACGCCTTAAGATGCAGGGCAGCAAGCAATCCTTTAGCTACAATGCTATaGAATGTCAGTCTGCTACAT +
Preference number: 4 (lower is better)
Translates to: SQALLLEYALRCRAASNPLATML*NVSLLH
Trigger: ATGTAGCAGACTGACATTTCATAGCATTGTAGCTAA...AGGATTGCTTGCTGCCCTGCATCTTAAGGCGTATTCTAGCAGCAAAGCTTGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325885.6
CDS-3UTR GCA 90 bp CATTCTTTAGTGGTGAATTTTGAGATTTTAGTGCACCCATCACTGGAGCAGTGTGTAGCAATTGAGCTTTaGCCCACGATCACAGAGGAT +
Preference number: 4 (lower is better)
Translates to: HSLVVNFEILVHPSLEQCVAIEL*PTITED
Trigger: ATCCTCTGTGATCGTGGGGCAAAGCTCAATTGCTAC...ACACTGCTCCAGTGATGGGTGCACTAAAATCTCAAAATTCACCACTAAAGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325885.6
CDS-3UTR GCA 90 bp CAAGCAATCCTCCAATTGTTCCAGGGTGTGATCTTGTTTTACTTTGTTAATTATTGTAGTCAAGCAGCATaGGGCAGACCAGGTGGTGCT +
Preference number: 4 (lower is better)
Translates to: QAILQLFQGVILFYFVNYCSQAA*GRPGGA
Trigger: AGCACCACCTGGTCTGCCGCATGCTGCTTGACTACA...ATAATTAACAAAGTAAAACAAGATCACACCCTGGAACAATTGGAGGATTGCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325885.6
CDS-3UTR GCA 90 bp AGCAGTGTACACTGTACCCAATATGTAGTCTTTTATCCCTCACCCCACTCTCAACTGTCACTAGCAAAGTaGTCCTTATCTCTTAGCTAC +
Preference number: 4 (lower is better)
Translates to: SSVHCTQYVVFYPSPHSQLSLAK*SLSLSY
Trigger: GTAGCTAAGAGATAAGGAGCACTTTGCTAGTGACAG...TTGAGAGTGGGGTGAGGGATAAAAGACTACATATTGGGTACAGTGTACACTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325885.6
CDS-3UTR GCA 90 bp AGCAGTGTACACTGTACCCAATATGTAGTCTTTTATCCCTCACCCCACTCTCAACAGCTCCATCCAAGTTaGTGCAAAAGACATCATTTC +
Preference number: 4 (lower is better)
Translates to: SSVHCTQYVVFYPSPHSQQLHPS*CKRHHF
Trigger: GAAATGATGTCTTTTGCAGCAACTTGGATGGAGCTG...TTGAGAGTGGGGTGAGGGATAAAAGACTACATATTGGGTACAGTGTACACTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000325885.6
CDS-3UTR GCA 90 bp CATTCTTTAGTGGTGAATTTTGAGATTTTAGTGCACCCATCACTGGAGCAGTGTGAATACGCCTTAAGATaGAGGGCAGCAAGCAATCCT +
Preference number: 4 (lower is better)
Translates to: HSLVVNFEILVHPSLEQCEYALR*RAASNP
Trigger: AGGATTGCTTGCTGCCCTGCATCTTAAGGCGTATTC...ACACTGCTCCAGTGATGGGTGCACTAAAATCTCAAAATTCACCACTAAAGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325885.6
CDS-3UTR CCA 90 bp AGCAGTGTACACTGTACCCAATATGTAGTCTTTTATCCCTCACCCCACTCTCAAATTTTCCGAAGTCATTaGACTTTAGCGCCTCAAGGA +
Preference number: 4 (lower is better)
Translates to: SSVHCTQYVVFYPSPHSQIFRSH*TLAPQG
Trigger: TCCTTGAGGCGCTAAAGTCCAATGACTTCGGAAAAT...TTGAGAGTGGGGTGAGGGATAAAAGACTACATATTGGGTACAGTGTACACTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000325885.6
CDS-3UTR CCA 90 bp GAAATAAACTTGAGTAGCTTGGTTTGGGGAGTAGGAGTTTGCAAAACTAGTGACGTGCATGAGAGTCCTTaGAGAGTTACAGCACACAGT +
Preference number: 4 (lower is better)
Translates to: EINLSSLVWGVGVCKTSDVHESP*RVTAHS
Trigger: ACTGTGTGCTGTAACTCTCCAAGGACTCTCATGCAC...GTCACTAGTTTTGCAAACTCCTACTCCCCAAACCAAGCTACTCAAGTTTATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325885.6
CDS-3UTR CCA 90 bp GAAAACACCAAGTTTAAGAGGCCAATTGCAAAGCCTGCTATATGGCCATTTGAAAAGGCAGGAGTCACATaGGACTCATCTTTGCATCTC +
Preference number: 4 (lower is better)
Translates to: ENTKFKRPIAKPAIWPFEKAGVT*DSSLHL
Trigger: GAGATGCAAAGATGAGTCCCATGTGACTCCTGCCTT...TTCAAATGGCCATATAGCAGGCTTTGCAATTGGCCTCTTAAACTTGGTGTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325885.6
CDS-3UTR TCA 90 bp GAAATAAACTTGAGTAGCTTGGTTTGGGGAGTAGGAGTTTGCAAAACTAGTGACATCTCGATAAGTGCATaGGAGTCCTTGGAGAGTTAC +
Preference number: 4 (lower is better)
Translates to: EINLSSLVWGVGVCKTSDISISA*ESLESY
Trigger: GTAACTCTCCAAGGACTCTCATGCACTTATCGAGAT...GTCACTAGTTTTGCAAACTCCTACTCCCCAAACCAAGCTACTCAAGTTTATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325885.6
CDS-3UTR TCA 90 bp AGCAGTGTACACTGTACCCAATATGTAGTCTTTTATCCCTCACCCCACTCTCAAGCTCCCACTTATAAGTaGGAACATATGGTATTTCAC +
Preference number: 4 (lower is better)
Translates to: SSVHCTQYVVFYPSPHSQAPTYK*EHMVFH
Trigger: GTGAAATACCATATGTTCTCACTTATAAGTGGGAGC...TTGAGAGTGGGGTGAGGGATAAAAGACTACATATTGGGTACAGTGTACACTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325885.6
CDS-3UTR TCA 90 bp CTTTCATTAAACTGGAAAATCGGGTGGCCCTTTCATGGCTACAAGCTAATTTCAAGCCTCAAGCAAGCTTaGGTTACTTGGAGATTTCAG +
Preference number: 4 (lower is better)
Translates to: LSLNWKIGWPFHGYKLISSLKQA*VTWRFQ
Trigger: CTGAAATCTCCAAGTAACTCAAGCTTGCTTGAGGCT...TGAAATTAGCTTGTAGCCATGAAAGGGCCACCCGATTTTCCAGTTTAATGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428113.5
CDS-3UTR GCA 90 bp CAAGCAATCCTCCAATTGTTCCAGGGTGTGATCTTGTTTTACTTTGTTAATTATGTCACAGTTCCAGGCTaGCTTGTGGAGGGGAGATTT +
Preference number: 4 (lower is better)
Translates to: QAILQLFQGVILFYFVNYVTVPG*LVEGRF
Trigger: AAATCTCCCCTCCACAAGGCAGCCTGGAACTGTGAC...ATAATTAACAAAGTAAAACAAGATCACACCCTGGAACAATTGGAGGATTGCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325885.6
CDS-3UTR CCA 90 bp CCCTTTCATGGCTACAAGCTAATTTCAAAGCAGGCTGAGTCATCTTTAGATCAGTTGATTGTAGCATTGTaGTCCAGTAGCACCAGAAGA +
Preference number: 4 (lower is better)
Translates to: PFHGYKLISKQAESSLDQLIVAL*SSSTRR
Trigger: TCTTCTGGTGCTACTGGACCACAATGCTACAATCAA...CTGATCTAAAGATGACTCAGCCTGCTTTGAAATTAGCTTGTAGCCATGAAAGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428113.5
CDS-3UTR TCA 90 bp TTATTTGCTACTCTTTTTCTCATTCTAGCTCTCACACCCAATTTCAAGCAAACCTTAAGGAGTAGCAATTaGGCTTTGCCCCACGATCAC +
Preference number: 4 (lower is better)
Translates to: LFATLFLILALTPNFKQTLRSSN*ALPHDH
Trigger: GTGATCGTGGGGCAAAGCTCAATTGCTACTCCTTAA...GGTTTGCTTGAAATTGGGTGTGAGAGCTAGAATGAGAAAAAGAGTAGCAAATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428113.5
CDS-3UTR GCA 90 bp CTAGCAAAGTGCTCCTTATCTCTTAGCTACAATGCTATGAAATGTCAGTCTGCTCCTAGGATTGGGAACTaGTGTCTCATAAGGCTTAAT +
Preference number: 4 (lower is better)
Translates to: LAKCSLSLSYNAMKCQSAPRIGN*CLIRLN
Trigger: ATTAAGCCTTATGAGACAGCAGTTCCCAATCCTAGG...AGCAGACTGACATTTCATAGCATTGTAGCTAAGAGATAAGGAGCACTTTGCTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325885.6
CDS-3UTR GCA 90 bp GGTGATTGCCAGTTAACATTAAATGATAGCCTATTGGAATATCTGACATCATCTCTTGCCCCAAGTCAGTaGATCACAAGCTTTGCTGCT +
Preference number: 4 (lower is better)
Translates to: GDCQLTLNDSLLEYLTSSLAPSQ*ITSFAA
Trigger: AGCAGCAAAGCTTGTGATGCACTGACTTGGGGCAAG...AGATGATGTCAGATATTCCAATAGGCTATCATTTAATGTTAACTGGCAATCACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325885.6
CDS-3UTR CCA 90 bp TTATTTGCTACTCTTTTTCTCATTCTAGCTCTCACACCCAATTTCAAGCAAACCGGCGTCTCCTCATCTTaGTTGTTGGTCTTCATGTTC +
Preference number: 4 (lower is better)
Translates to: LFATLFLILALTPNFKQTGVSSS*LLVFMF
Trigger: GAACATGAAGACCAACAACCAAGATGAGGAGACGCC...GGTTTGCTTGAAATTGGGTGTGAGAGCTAGAATGAGAAAAAGAGTAGCAAATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428113.5
CDS-3UTR CCA 90 bp CATTCTTTAGTGGTGAATTTTGAGATTTTAGTGCACCCATCACTGGAGCAGTGTGCCTGTATCACCTTATaGAACTGTGGAGGGTATATT +
Preference number: 4 (lower is better)
Translates to: HSLVVNFEILVHPSLEQCACITL*NCGGYI
Trigger: AATATACCCTCCACAGTTCCATAAGGTGATACAGGC...ACACTGCTCCAGTGATGGGTGCACTAAAATCTCAAAATTCACCACTAAAGAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325885.6
CDS-3UTR CCA 90 bp AGCAGTGTACACTGTACCCAATATGTAGTCTTTTATCCCTCACCCCACTCTCAATCCATTATATCACTCTaGATGTCTTTGCATCCTCAT +
Preference number: 4 (lower is better)
Translates to: SSVHCTQYVVFYPSPHSQSIISL*MSLHPH
Trigger: ATGAGGATGCAAAGACATCCAGAGTGATATAATGGA...TTGAGAGTGGGGTGAGGGATAAAAGACTACATATTGGGTACAGTGTACACTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325885.6
CDS-3UTR CCA 90 bp CTTTCATTAAACTGGAAAATCGGGTGGCCCTTTCATGGCTACAAGCTAATTTCATCCTTCCTCTCCCTCTaGAAGCTTTGTTGTGATTTA +
Preference number: 4 (lower is better)
Translates to: LSLNWKIGWPFHGYKLISSFLSL*KLCCDL
Trigger: TAAATCACAACAAAGCTTCCAGAGGGAGAGGAAGGA...TGAAATTAGCTTGTAGCCATGAAAGGGCCACCCGATTTTCCAGTTTAATGAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428113.5
CDS-3UTR CCA 90 bp AAGCAGGCTGAGTCATCTTTAGATCAGTCATTCTGTTTAAAAGATGGCAAATGTAAGCCACCAGTGCACTaGTGTTCACACAAGGCAAAA +
Preference number: 4 (lower is better)
Translates to: KQAESSLDQSFCLKDGKCKPPVH*CSHKAK
Trigger: TTTTGCCTTGTGTGAACACCAGTGCACTGGTGGCTT...ACATTTGCCATCTTTTAAACAGAATGACTGATCTAAAGATGACTCAGCCTGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428113.5
CDS-3UTR TCA 90 bp GGTGATTGCCAGTTAACATTAAATGATAGCCTATTGGAATATCTGACATCATCTTTAAGGAGTAGCAATTaGGCTTTGCCCCACGATCAC +
Preference number: 4 (lower is better)
Translates to: GDCQLTLNDSLLEYLTSSLRSSN*ALPHDH
Trigger: GTGATCGTGGGGCAAAGCTCAATTGCTACTCCTTAA...AGATGATGTCAGATATTCCAATAGGCTATCATTTAATGTTAACTGGCAATCACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325885.6
CDS-3UTR TCA 90 bp GAAAACACCAAGTTTAAGAGGCCAATTGCAAAGCCTGCTATATGGCCATTTGAAAAGATCTCCTTGTTTTaGCTATGCTCATATGCCTTC +
Preference number: 4 (lower is better)
Translates to: ENTKFKRPIAKPAIWPFEKISLF*LCSYAF
Trigger: GAAGGCATATGAGCATAGTCAAAACAAGGAGATCTT...TTCAAATGGCCATATAGCAGGCTTTGCAATTGGCCTCTTAAACTTGGTGTTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000325885.6
CDS-3UTR TCA 90 bp CTTTCATTAAACTGGAAAATCGGGTGGCCCTTTCATGGCTACAAGCTAATTTCAAATTTCAAAGCAGGCTaGGTCATCTTTAGATCAGTC +
Preference number: 4 (lower is better)
Translates to: LSLNWKIGWPFHGYKLISNFKAG*VIFRSV
Trigger: GACTGATCTAAAGATGACTCAGCCTGCTTTGAAATT...TGAAATTAGCTTGTAGCCATGAAAGGGCCACCCGATTTTCCAGTTTAATGAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428113.5
CDS-3UTR GCA 90 bp GTCATCTTTAGATCAGTCATTCTGTTTAAAAGATGGCAAATGTATGCCTGTCTAGTAGCAATTGAGCTTTaGCCCACGATCACAGAGGAT +
Preference number: 4 (lower is better)
Translates to: VIFRSVILFKRWQMYACLVAIEL*PTITED
Trigger: ATCCTCTGTGATCGTGGGGCAAAGCTCAATTGCTAC...TAGACAGGCATACATTTGCCATCTTTTAAACAGAATGACTGATCTAAAGATGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428113.5
CDS-3UTR GCA 90 bp GAAAACACCAAGTTTAAGAGGCCAATTGCAAAGCCTGCTATATGGCCATTTGAAGTGTCCACATCTATTTaGCTTTGGATCAAAATAGCC +
Preference number: 4 (lower is better)
Translates to: ENTKFKRPIAKPAIWPFEVSTSI*LWIKIA
Trigger: GGCTATTTTGATCCAAAGGCAAATAGATGTGGACAC...TTCAAATGGCCATATAGCAGGCTTTGCAATTGGCCTCTTAAACTTGGTGTTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325885.6
CDS-3UTR GCA 90 bp GGCTACAAGCTAATTTCAAAGCAGGCTGAGTCATCTTTAGATCAGTCATTCTGTGATTTCAGACAAGGCTaGCATTTGAATCTTCCTCAA +
Preference number: 4 (lower is better)
Translates to: GYKLISKQAESSLDQSFCDFRQG*HLNLPQ
Trigger: TTGAGGAAGATTCAAATGGCAGCCTTGTCTGAAATC...ACAGAATGACTGATCTAAAGATGACTCAGCCTGCTTTGAAATTAGCTTGTAGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428113.5
CDS-3UTR GCA 90 bp CCCTTTCATGGCTACAAGCTAATTTCAAAGCAGGCTGAGTCATCTTTAGATCAGAAGATGGCAAATGTATaGCTGTCTAACACTATTCAC +
Preference number: 4 (lower is better)
Translates to: PFHGYKLISKQAESSLDQKMANV*LSNTIH
Trigger: GTGAATAGTGTTAGACAGGCATACATTTGCCATCTT...CTGATCTAAAGATGACTCAGCCTGCTTTGAAATTAGCTTGTAGCCATGAAAGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428113.5
CDS-3UTR CCA 90 bp CAAGCAATCCTCCAATTGTTCCAGGGTGTGATCTTGTTTTACTTTGTTAATTATGGCGTCTCCTCATCTTaGTTGTTGGTCTTCATGTTC +
Preference number: 4 (lower is better)
Translates to: QAILQLFQGVILFYFVNYGVSSS*LLVFMF
Trigger: GAACATGAAGACCAACAACCAAGATGAGGAGACGCC...ATAATTAACAAAGTAAAACAAGATCACACCCTGGAACAATTGGAGGATTGCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325885.6
CDS-3UTR CCA 90 bp GAGTCATCTTTAGATCAGTCATTCTGTTTAAAAGATGGCAAATGTATGCCTGTCCGGGTGGCCCTTTCATaGCTACAAGCTAATTTCAAA +
Preference number: 4 (lower is better)
Translates to: ESSLDQSFCLKDGKCMPVRVALS*LQANFK
Trigger: TTTGAAATTAGCTTGTAGCCATGAAAGGGCCACCCG...GACAGGCATACATTTGCCATCTTTTAAACAGAATGACTGATCTAAAGATGACTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428113.5
3UTR CAA 72 bp AAGATAAGCATTAAAAGTGAGTCTGCACCTGTACTCTaGCCCCATCACTTTATATTGCAGTTAGCTGTGTGT +
Preference number: 4 (lower is better)
Translates to: KISIKSESAPVL*PHHFILQLAVC
Trigger: ACACACAGCTAACTGCAATATAAAGTGATGGGGCAAGAGTACAGGTGCAGACTCACTTTTAATGCTTATCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325885.6
CDS-3UTR TCA 90 bp CATTCTTTAGTGGTGAATTTTGAGATTTTAGTGCACCCATCACTGGAGCAGTGTTGTGTTCATAGGCATTaGCTACAACTTCAATTGCTT +
Preference number: 4 (lower is better)
Translates to: HSLVVNFEILVHPSLEQCCVHRH*LQLQLL
Trigger: AAGCAATTGAAGTTGTAGTCAATGCCTATGAACACA...ACACTGCTCCAGTGATGGGTGCACTAAAATCTCAAAATTCACCACTAAAGAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325885.6
CDS-3UTR TCA 90 bp AAGCAGGCTGAGTCATCTTTAGATCAGTCATTCTGTTTAAAAGATGGCAAATGTCTGGAAGCTTTGTTGTaGTTTATCGAGAGAACAGCA +
Preference number: 4 (lower is better)
Translates to: KQAESSLDQSFCLKDGKCLEALL*FIERTA
Trigger: TGCTGTTCTCTCGATAAATCACAACAAAGCTTCCAG...ACATTTGCCATCTTTTAAACAGAATGACTGATCTAAAGATGACTCAGCCTGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428113.5
CDS-3UTR GCA 90 bp CATTCTTTAGTGGTGAATTTTGAGATTTTAGTGCACCCATCACTGGAGCAGTGTGACTACAACTTCAATTaGTTTAGGACAAGAATGGCA +
Preference number: 4 (lower is better)
Translates to: HSLVVNFEILVHPSLEQCDYNFN*FRTRMA
Trigger: TGCCATTCTTGTCCTAAAGCAATTGAAGTTGTAGTC...ACACTGCTCCAGTGATGGGTGCACTAAAATCTCAAAATTCACCACTAAAGAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325885.6
CDS-3UTR GCA 90 bp CATTCTTTAGTGGTGAATTTTGAGATTTTAGTGCACCCATCACTGGAGCAGTGTCTCCATCCAAGTTGCTaGAAAAGACATCATTTCATT +
Preference number: 4 (lower is better)
Translates to: HSLVVNFEILVHPSLEQCLHPSC*KRHHFI
Trigger: AATGAAATGATGTCTTTTGCAGCAACTTGGATGGAG...ACACTGCTCCAGTGATGGGTGCACTAAAATCTCAAAATTCACCACTAAAGAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000325885.6
CDS-3UTR GCA 90 bp CAAGCAATCCTCCAATTGTTCCAGGGTGTGATCTTGTTTTACTTTGTTAATTATAGCATCAGTTTTACTTaGCCCAAGTCAGTGCATCAC +
Preference number: 4 (lower is better)
Translates to: QAILQLFQGVILFYFVNYSISFT*PKSVHH
Trigger: GTGATGCACTGACTTGGGGCAAGTAAAACTGATGCT...ATAATTAACAAAGTAAAACAAGATCACACCCTGGAACAATTGGAGGATTGCTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325885.6
CDS-3UTR CCA 90 bp CTAGCAAAGTGCTCCTTATCTCTTAGCTACAATGCTATGAAATGTCAGTCTGCTACAGAGAATGGAACTTaGAGTTGTACAAAAGTGCAA +
Preference number: 4 (lower is better)
Translates to: LAKCSLSLSYNAMKCQSATENGT*SCTKVQ
Trigger: TTGCACTTTTGTACAACTCCAAGTTCCATTCTCTGT...AGCAGACTGACATTTCATAGCATTGTAGCTAAGAGATAAGGAGCACTTTGCTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325885.6
CDS-3UTR CCA 90 bp GAGTCATCTTTAGATCAGTCATTCTGTTTAAAAGATGGCAAATGTATGCCTGTCGCTTGGCACAGAGAATaGAACTTGGAGTTGTACAAA +
Preference number: 4 (lower is better)
Translates to: ESSLDQSFCLKDGKCMPVAWHRE*NLELYK
Trigger: TTTGTACAACTCCAAGTTCCATTCTCTGTGCCAAGC...GACAGGCATACATTTGCCATCTTTTAAACAGAATGACTGATCTAAAGATGACTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428113.5
CDS-3UTR CCA 90 bp GAAAACACCAAGTTTAAGAGGCCAATTGCAAAGCCTGCTATATGGCCATTTGAAGGTACAGGTGGTTTTTaGTTACATGGATACATTCTT +
Preference number: 4 (lower is better)
Translates to: ENTKFKRPIAKPAIWPFEGTGGF*LHGYIL
Trigger: AAGAATGTATCCATGTAACCAAAAACCACCTGTACC...TTCAAATGGCCATATAGCAGGCTTTGCAATTGGCCTCTTAAACTTGGTGTTTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325885.6
CDS-3UTR GCA 90 bp CATTCTTTAGTGGTGAATTTTGAGATTTTAGTGCACCCATCACTGGAGCAGTGTCTACATTTTTCTTTCTaGAATCCACTAACTAGCAAG +
Preference number: 4 (lower is better)
Translates to: HSLVVNFEILVHPSLEQCLHFSF*NPLTSK
Trigger: CTTGCTAGTTAGTGGATTGCAGAAAGAAAAATGTAG...ACACTGCTCCAGTGATGGGTGCACTAAAATCTCAAAATTCACCACTAAAGAATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000325885.6
CDS-3UTR CCA 90 bp CAAGCAATCCTCCAATTGTTCCAGGGTGTGATCTTGTTTTACTTTGTTAATTATTTGATTGTAGCATTGTaGTCCAGTAGCACCAGAAGA +
Preference number: 4 (lower is better)
Translates to: QAILQLFQGVILFYFVNYLIVAL*SSSTRR
Trigger: TCTTCTGGTGCTACTGGACCACAATGCTACAATCAA...ATAATTAACAAAGTAAAACAAGATCACACCCTGGAACAATTGGAGGATTGCTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325885.6
CDS-3UTR CCA 90 bp CAAGCAATCCTCCAATTGTTCCAGGGTGTGATCTTGTTTTACTTTGTTAATTATGCTTGGCACAGAGAATaGAACTTGGAGTTGTACAAA +
Preference number: 4 (lower is better)
Translates to: QAILQLFQGVILFYFVNYAWHRE*NLELYK
Trigger: TTTGTACAACTCCAAGTTCCATTCTCTGTGCCAAGC...ATAATTAACAAAGTAAAACAAGATCACACCCTGGAACAATTGGAGGATTGCTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325885.6
CDS-3UTR CCA 90 bp CAAGCAATCCTCCAATTGTTCCAGGGTGTGATCTTGTTTTACTTTGTTAATTATTGGCTCAGTGATGTCTaGTTCAAATGTCCATTCTTG +
Preference number: 4 (lower is better)
Translates to: QAILQLFQGVILFYFVNYWLSDV*FKCPFL
Trigger: CAAGAATGGACATTTGAACCAGACATCACTGAGCCA...ATAATTAACAAAGTAAAACAAGATCACACCCTGGAACAATTGGAGGATTGCTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325885.6
CDS-3UTR CCA 90 bp GGTGATTGCCAGTTAACATTAAATGATAGCCTATTGGAATATCTGACATCATCTCAGAATTATATTGGTTaGAAGAAAACCTGGGTCCCA +
Preference number: 4 (lower is better)
Translates to: GDCQLTLNDSLLEYLTSSQNYIG*KKTWVP
Trigger: TGGGACCCAGGTTTTCTTCCAACCAATATAATTCTG...AGATGATGTCAGATATTCCAATAGGCTATCATTTAATGTTAACTGGCAATCACC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325885.6
CDS-3UTR TCA 90 bp CAAGCAATCCTCCAATTGTTCCAGGGTGTGATCTTGTTTTACTTTGTTAATTATTTTAGTGGTGAATTTTaGGATTTTAGTGCACCCATC +
Preference number: 4 (lower is better)
Translates to: QAILQLFQGVILFYFVNYFSGEF*DFSAPI
Trigger: GATGGGTGCACTAAAATCTCAAAATTCACCACTAAA...ATAATTAACAAAGTAAAACAAGATCACACCCTGGAACAATTGGAGGATTGCTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000325885.6
3UTR CAA 72 bp TTAGGTGATTGCCAGTTAACATTAAATGATAGCCTATaGGAATATCTGACATCATCTCTATTCAACACTCCA +
Preference number: 4 (lower is better)
Translates to: LGDCQLTLNDSL*EYLTSSLFNTP
Trigger: TGGAGTGTTGAATAGAGATGATGTCAGATATTCCAATAGGCTATCATTTAATGTTAACTGGCAATCACCTAA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325885.6
CDS-3UTR CCA 90 bp CAAGCAATCCTCCAATTGTTCCAGGGTGTGATCTTGTTTTACTTTGTTAATTATAAAGGAATTGCTCTATaGCATCTGTTGTGTAATGTT +
Preference number: 4 (lower is better)
Translates to: QAILQLFQGVILFYFVNYKGIAL*HLLCNV
Trigger: AACATTACACAACAGATGCCATAGAGCAATTCCTTT...ATAATTAACAAAGTAAAACAAGATCACACCCTGGAACAATTGGAGGATTGCTTG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325885.6
CDS CCA 90 bp TCAGGCTGGGCAGCAGGGCGCACGGAGGTGACCTTCAGCACGTACTaGATGGCAGCACAGCCGTTGATATCCATGAGATTGGCTTCGGCG +
Preference number: 5 (lower is better)
Translates to: SGWAAGRTEVTFSTY*MAAQPLISMRLASA
Trigger: CGCCGAAGCCAATCTCATGGATATCAACGGCTGTGCTGCCATCCAGTACGTGCTGAAGGTCACCTCCGTGCGCCCTGCTGCCCAGCCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325885.6
ENST00000428113.5
CDS GCA 90 bp TTGATATCCATGAGATTGGCTTCGGCGCCAGCTTCCAGCATCATGTaGATGAGCACGTGGTCACAGTTCCAGGCTGCCTTGTGGAGGGGA +
Preference number: 5 (lower is better)
Translates to: LISMRLASAPASSIM*MSTWSQFQAALWRG
Trigger: TCCCCTCCACAAGGCAGCCTGGAACTGTGACCACGTGCTCATGCACATGATGCTGGAAGCTGGCGCCGAAGCCAATCTCATGGATATCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325885.6
ENST00000428113.5
CDS CCA 90 bp AGATTGGCTTCGGCGCCAGCTTCCAGCATCATGTGCATGAGCACGTaGTCACAGTTCCAGGCTGCCTTGTGGAGGGGAGATTTAAAGTCG +
Preference number: 5 (lower is better)
Translates to: RLASAPASSIMCMST*SQFQAALWRGDLKS
Trigger: CGACTTTAAATCTCCCCTCCACAAGGCAGCCTGGAACTGTGACCACGTGCTCATGCACATGATGCTGGAAGCTGGCGCCGAAGCCAATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325885.6
ENST00000428113.5
CDS CCA 90 bp CGAAGTGGGCAGCCGTGTGCAAGGGCGTCTCCTCATCTTGGTTGTTaGTCTTCATGTTCACATTCGCCCCTCTCCAAACCAATTGCTTGG +
Preference number: 5 (lower is better)
Translates to: RSGQPCARASPHLGC*SSCSHSPLSKPIAW
Trigger: CCAAGCAATTGGTTTGGAGAGGGGCGAATGTGAACATGAAGACCAACAACCAAGATGAGGAGACGCCCTTGCACACGGCTGCCCACTTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325885.6
ENST00000428113.5
CDS CCA 90 bp GAAAGGCCGAAGTGGGCAGCCGTGTGCAAGGGCGTCTCCTCATCTTaGTTGTTGGTCTTCATGTTCACATTCGCCCCTCTCCAAACCAAT +
Preference number: 5 (lower is better)
Translates to: ERPKWAAVCKGVSSS*LLVFMFTFAPLQTN
Trigger: ATTGGTTTGGAGAGGGGCGAATGTGAACATGAAGACCAACAACCAAGATGAGGAGACGCCCTTGCACACGGCTGCCCACTTCGGCCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325885.6
ENST00000428113.5
CDS GCA 90 bp AGCTTCCAGCATCATGTGCATGAGCACGTGGTCACAGTTCCAGGCTaGCTTGTGGAGGGGAGATTTAAAGTCGTCATCTCGGGCATTGAC +
Preference number: 5 (lower is better)
Translates to: SFQHHVHEHVVTVPG*LVEGRFKVVISGID
Trigger: GTCAATGCCCGAGATGACGACTTTAAATCTCCCCTCCACAAGGCAGCCTGGAACTGTGACCACGTGCTCATGCACATGATGCTGGAAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325885.6
ENST00000428113.5
CDS CCA 90 bp AGCATCATGTGCATGAGCACGTGGTCACAGTTCCAGGCTGCCTTGTaGAGGGGAGATTTAAAGTCGTCATCTCGGGCATTGACTTCGGCT +
Preference number: 5 (lower is better)
Translates to: SIMCMSTWSQFQAAL*RGDLKSSSRALTSA
Trigger: AGCCGAAGTCAATGCCCGAGATGACGACTTTAAATCTCCCCTCCACAAGGCAGCCTGGAACTGTGACCACGTGCTCATGCACATGATGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325885.6
ENST00000428113.5
CDS-3UTR CAA 90 bp CCTCAGTCCCTCAGGAAGCCACCAGTGCACTGGTGTTCACACAAGGCAAAACAATTGATATCCATGAGATaGGCTTCGGCGCCAGCTTCC +
Preference number: 5 (lower is better)
Translates to: PQSLRKPPVHWCSHKAKQLISMR*ASAPAS
Trigger: GGAAGCTGGCGCCGAAGCCAATCTCATGGATATCAA...TTGTTTTGCCTTGTGTGAACACCAGTGCACTGGTGGCTTCCTGAGGGACTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428113.5
CDS CCA 90 bp TTCAGACAAGGCTGCCATTTGAATCTTCCTCAACCTGCTGACCACTaGGCAGAGCCTCACCTTATGGAACTGTGGAGGGTATATTCGGGC +
Preference number: 5 (lower is better)
Translates to: FRQGCHLNLPQPADH*AEPHLMELWRVYSG
Trigger: GCCCGAATATACCCTCCACAGTTCCATAAGGTGAGGCTCTGCCCAGTGGTCAGCAGGTTGAGGAAGATTCAAATGGCAGCCTTGTCTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428113.5
CDS TCA 90 bp TGGAGATTTCAGACAAGGCTGCCATTTGAATCTTCCTCAACCTGCTaGCCACTGGGCAGAGCCTCACCTTATGGAACTGTGGAGGGTATA +
Preference number: 5 (lower is better)
Translates to: WRFQTRLPFESSSTC*PLGRASPYGTVEGI
Trigger: TATACCCTCCACAGTTCCATAAGGTGAGGCTCTGCCCAGTGGTCAGCAGGTTGAGGAAGATTCAAATGGCAGCCTTGTCTGAAATCTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428113.5
CDS-3UTR CAA 90 bp TCACAAGCTTTGCTGCTAGAATACGCCTTAAGATGCAGGGCAGCAAGCAATCCTTTGATATCCATGAGATaGGCTTCGGCGCCAGCTTCC +
Preference number: 5 (lower is better)
Translates to: SQALLLEYALRCRAASNPLISMR*ASAPAS
Trigger: GGAAGCTGGCGCCGAAGCCAATCTCATGGATATCAA...AGGATTGCTTGCTGCCCTGCATCTTAAGGCGTATTCTAGCAGCAAAGCTTGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325885.6
CDS-3UTR CAA 90 bp CCTCAGTCCCTCAGGAAGCCACCAGTGCACTGGTGTTCACACAAGGCAAAACAACACAGAGAATGGAACTaGGAGTTGTACAAAAGTGCA +
Preference number: 5 (lower is better)
Translates to: PQSLRKPPVHWCSHKAKQHREWN*ELYKSA
Trigger: TGCACTTTTGTACAACTCCAAGTTCCATTCTCTGTG...TTGTTTTGCCTTGTGTGAACACCAGTGCACTGGTGGCTTCCTGAGGGACTGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428113.5
CDS-3UTR CAA 90 bp GACTTACCTCAGTCCCTCAGGAAGCCACCAGTGCACTGGTGTTCACACAAGGCAAGGCAACCAGTAACCTaGTTTATAAGATGCCAAAAC +
Preference number: 5 (lower is better)
Translates to: DLPQSLRKPPVHWCSHKARQPVT*FIRCQN
Trigger: GTTTTGGCATCTTATAAACAAGGTTACTGGTTGCCT...TGCCTTGTGTGAACACCAGTGCACTGGTGGCTTCCTGAGGGACTGAGGTAAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428113.5
CDS-3UTR CAA 90 bp TCACAAGCTTTGCTGCTAGAATACGCCTTAAGATGCAGGGCAGCAAGCAATCCTCCCTCTCCAAACCAATaGCTTGGCACAGAGAATGGA +
Preference number: 5 (lower is better)
Translates to: SQALLLEYALRCRAASNPPSPNQ*LGTENG
Trigger: TCCATTCTCTGTGCCAAGCAATTGGTTTGGAGAGGG...AGGATTGCTTGCTGCCCTGCATCTTAAGGCGTATTCTAGCAGCAAAGCTTGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325885.6
CDS-3UTR CAA 90 bp CCTCAGTCCCTCAGGAAGCCACCAGTGCACTGGTGTTCACACAAGGCAAAACAATCCTCATCTTGGTTGTaGGTCTTCATGTTCACATTC +
Preference number: 5 (lower is better)
Translates to: PQSLRKPPVHWCSHKAKQSSSWL*VFMFTF
Trigger: GAATGTGAACATGAAGACCAACAACCAAGATGAGGA...TTGTTTTGCCTTGTGTGAACACCAGTGCACTGGTGGCTTCCTGAGGGACTGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428113.5
CDS-3UTR CAA 90 bp TCACAAGCTTTGCTGCTAGAATACGCCTTAAGATGCAGGGCAGCAAGCAATCCTGGGCGTCTCCTCATCTaGGTTGTTGGTCTTCATGTT +
Preference number: 5 (lower is better)
Translates to: SQALLLEYALRCRAASNPGRLLI*VVGLHV
Trigger: AACATGAAGACCAACAACCAAGATGAGGAGACGCCC...AGGATTGCTTGCTGCCCTGCATCTTAAGGCGTATTCTAGCAGCAAAGCTTGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325885.6
CDS CCA 90 bp TCCGTTTCAGCGACTCTCTTTACAGGTGGTGGATGTCAGAATGGCTaGATTGACATAAGCAGTAACCAAGCACTGGCCCACCTGAATTTT +
Preference number: 5 (lower is better)
Translates to: SVSATLFTGGGCQNG*IDISSNQALAHLNF
Trigger: AAAATTCAGGTGGGCCAGTGCTTGGTTACTGCTTATGTCAATCCAGCCATTCTGACATCCACCACCTGTAAAGAGAGTCGCTGAAACGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257621.4
CDS TCA 90 bp ACTACATCATCTGGGGTAGGTAGGGGTCACAAAGTCTTGAAACCATaGGTGTACAAGCAGACAACAATGTTGGCCACCCAGAAAGGCTTA +
Preference number: 5 (lower is better)
Translates to: TTSSGVGRGHKVLKP*VYKQTTMLATQKGL
Trigger: TAAGCCTTTCTGGGTGGCCAACATTGTTGTCTGCTTGTACACTCATGGTTTCAAGACTTTGTGACCCCTACCTACCCCAGATGATGTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257621.4
CDS-3UTR CAA 90 bp ATTAGGTATGTAATGGAAGGTCAAAGAGGATCAGAGGTAGTTAGCCCAGGACTCCCCTCTCCAAACCAATaGCTTGGCACAGAGAATGGA +
Preference number: 5 (lower is better)
Translates to: IRYVMEGQRGSEVVSPGLPSPNQ*LGTENG
Trigger: TCCATTCTCTGTGCCAAGCAATTGGTTTGGAGAGGG...GAGTCCTGGGCTAACTACCTCTGATCCTCTTTGACCTTCCATTACATACCTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428113.5
CDS-3UTR CAA 90 bp ACGTTAGCTTTCATTAAACTGGAAAATCGGGTGGCCCTTTCATGGCTACAAGCTATGGCAGCACAGCCGTaGATATCCATGAGATTGGCT +
Preference number: 5 (lower is better)
Translates to: TLAFIKLENRVALSWLQAMAAQP*ISMRLA
Trigger: AGCCAATCTCATGGATATCAACGGCTGTGCTGCCAT...AGCTTGTAGCCATGAAAGGGCCACCCGATTTTCCAGTTTAATGAAAGCTAACGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428113.5
CDS CCA 90 bp CCCAGAAAGGCTTACCTCTCCAAACCAATTGCTTGGCACAGAGAATaGAACTTGGAGTTGTACAAAAGTGCAAAGCTGTGTGTCCACTTA +
Preference number: 5 (lower is better)
Translates to: PRKAYLSKPIAWHRE*NLELYKSAKLCVHL
Trigger: TAAGTGGACACACAGCTTTGCACTTTTGTACAACTCCAAGTTCCATTCTCTGTGCCAAGCAATTGGTTTGGAGAGGTAAGCCTTTCTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257621.4
CDS CCA 90 bp TGTTCACATTCGCCCCTCTCCAAACCAATTGCTTGGCACAGAGAATaGAACTTGGAGTTGTACAAAAGTGCAAAGCTGTGTGTCCACTTA +
Preference number: 5 (lower is better)
Translates to: CSHSPLSKPIAWHRE*NLELYKSAKLCVHL
Trigger: TAAGTGGACACACAGCTTTGCACTTTTGTACAACTCCAAGTTCCATTCTCTGTGCCAAGCAATTGGTTTGGAGAGGGGCGAATGTGAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325885.6
ENST00000428113.5
CDS-3UTR CAA 90 bp TCACAAGCTTTGCTGCTAGAATACGCCTTAAGATGCAGGGCAGCAAGCAATCCTCACAGAGAATGGAACTaGGAGTTGTACAAAAGTGCA +
Preference number: 5 (lower is better)
Translates to: SQALLLEYALRCRAASNPHREWN*ELYKSA
Trigger: TGCACTTTTGTACAACTCCAAGTTCCATTCTCTGTG...AGGATTGCTTGCTGCCCTGCATCTTAAGGCGTATTCTAGCAGCAAAGCTTGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325885.6
CDS-3UTR CAA 90 bp TCTAACACTATTCACCTTTCTGGCAGACTTACCTCAGTCCCTCAGGAAGCCACCTTTCTCTTAACTAACTaGGCAGCTCCAGATTTAGTG +
Preference number: 5 (lower is better)
Translates to: SNTIHLSGRLTSVPQEATFLLTN*AAPDLV
Trigger: CACTAAATCTGGAGCTGCCAAGTTAGTTAAGAGAAA...GGTGGCTTCCTGAGGGACTGAGGTAAGTCTGCCAGAAAGGTGAATAGTGTTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428113.5
CDS-3UTR CAA 90 bp CATTCTTTAGTGGTGAATTTTGAGATTTTAGTGCACCCATCACTGGAGCAGTGTCAGTTCCAGGCTGCCTaGTGGAGGGGAGATTTAAAG +
Preference number: 5 (lower is better)
Translates to: HSLVVNFEILVHPSLEQCQFQAA*WRGDLK
Trigger: CTTTAAATCTCCCCTCCACAAGGCAGCCTGGAACTG...ACACTGCTCCAGTGATGGGTGCACTAAAATCTCAAAATTCACCACTAAAGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000325885.6
CDS GCA 90 bp ACAACAATGTTGGCCACCCAGAAAGGCTTACCTCTCCAAACCAATTaGTTGGCACAGAGAATGGAACTTGGAGTTGTACAAAAGTGCAAA +
Preference number: 5 (lower is better)
Translates to: TTMLATQKGLPLQTN*LAQRMELGVVQKCK
Trigger: TTTGCACTTTTGTACAACTCCAAGTTCCATTCTCTGTGCCAAGCAATTGGTTTGGAGAGGTAAGCCTTTCTGGGTGGCCAACATTGTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257621.4
CDS-3UTR CAA 90 bp AGCAGTGTACACTGTACCCAATATGTAGTCTTTTATCCCTCACCCCACTCTCAATTAACACAATCCACATaGGCCATTTCACAAGCCACG +
Preference number: 5 (lower is better)
Translates to: SSVHCTQYVVFYPSPHSQLTQST*AISQAT
Trigger: CGTGGCTTGTGAAATGGCCAATGTGGATTGTGTTAA...TTGAGAGTGGGGTGAGGGATAAAAGACTACATATTGGGTACAGTGTACACTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325885.6
CDS-3UTR CAA 90 bp ATTAGGTATGTAATGGAAGGTCAAAGAGGATCAGAGGTAGTTAGCCCAGGACTCTTAACACAATCCACATaGGCCATTTCACAAGCCACG +
Preference number: 5 (lower is better)
Translates to: IRYVMEGQRGSEVVSPGLLTQST*AISQAT
Trigger: CGTGGCTTGTGAAATGGCCAATGTGGATTGTGTTAA...GAGTCCTGGGCTAACTACCTCTGATCCTCTTTGACCTTCCATTACATACCTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428113.5
CDS-3UTR CAA 90 bp CATGGCTACAAGCTAATTTCAAAGCAGGCTGAGTCATCTTTAGATCAGTCATTCGGGCGTCTCCTCATCTaGGTTGTTGGTCTTCATGTT +
Preference number: 5 (lower is better)
Translates to: HGYKLISKQAESSLDQSFGRLLI*VVGLHV
Trigger: AACATGAAGACCAACAACCAAGATGAGGAGACGCCC...GAATGACTGATCTAAAGATGACTCAGCCTGCTTTGAAATTAGCTTGTAGCCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428113.5
CDS-3UTR CAA 90 bp AGCAGTGTACACTGTACCCAATATGTAGTCTTTTATCCCTCACCCCACTCTCAAGGGAAAGCAAAGGAATaGCTCTATGGCATCTGTTGT +
Preference number: 5 (lower is better)
Translates to: SSVHCTQYVVFYPSPHSQGKAKE*LYGICC
Trigger: ACAACAGATGCCATAGAGCAATTCCTTTGCTTTCCC...TTGAGAGTGGGGTGAGGGATAAAAGACTACATATTGGGTACAGTGTACACTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325885.6
CDS-3UTR CAA 90 bp AGCAGTGTACACTGTACCCAATATGTAGTCTTTTATCCCTCACCCCACTCTCAAAGTGCATCACAAGCTTaGCTGCTAGAATACGCCTTA +
Preference number: 5 (lower is better)
Translates to: SSVHCTQYVVFYPSPHSQSASQA*LLEYAL
Trigger: TAAGGCGTATTCTAGCAGCAAAGCTTGTGATGCACT...TTGAGAGTGGGGTGAGGGATAAAAGACTACATATTGGGTACAGTGTACACTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325885.6
CDS GCA 90 bp TGGCATCTGTTGTGTAATGTTCTTCTAATGGCACATCTCGATAAGTaGATGAGAGTCCTTGGAGAGTTACAGCACACAGTAAAGAGAGAG +
Preference number: 5 (lower is better)
Translates to: WHLLCNVLLMAHLDK*MRVLGELQHTVKRE
Trigger: CTCTCTCTTTACTGTGTGCTGTAACTCTCCAAGGACTCTCATGCACTTATCGAGATGTGCCATTAGAAGAACATTACACAACAGATGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325885.6
CDS-3UTR CAA 90 bp CATTCTTTAGTGGTGAATTTTGAGATTTTAGTGCACCCATCACTGGAGCAGTGTCCATTGGGTCTACAGTaGATTGTAGCATTGTGGTCC +
Preference number: 5 (lower is better)
Translates to: HSLVVNFEILVHPSLEQCPLGLQ*IVALWS
Trigger: GGACCACAATGCTACAATCAACTGTAGACCCAATGG...ACACTGCTCCAGTGATGGGTGCACTAAAATCTCAAAATTCACCACTAAAGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325885.6
CDS-3UTR CAA 90 bp CATGGCTACAAGCTAATTTCAAAGCAGGCTGAGTCATCTTTAGATCAGTCATTCCCATTGGGTCTACAGTaGATTGTAGCATTGTGGTCC +
Preference number: 5 (lower is better)
Translates to: HGYKLISKQAESSLDQSFPLGLQ*IVALWS
Trigger: GGACCACAATGCTACAATCAACTGTAGACCCAATGG...GAATGACTGATCTAAAGATGACTCAGCCTGCTTTGAAATTAGCTTGTAGCCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428113.5
CDS-3UTR CAA 90 bp AAGCAGGCTGAGTCATCTTTAGATCAGTCATTCTGTTTAAAAGATGGCAAATGTCAGTTCCAGGCTGCCTaGTGGAGGGGAGATTTAAAG +
Preference number: 5 (lower is better)
Translates to: KQAESSLDQSFCLKDGKCQFQAA*WRGDLK
Trigger: CTTTAAATCTCCCCTCCACAAGGCAGCCTGGAACTG...ACATTTGCCATCTTTTAAACAGAATGACTGATCTAAAGATGACTCAGCCTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428113.5
CDS-3UTR CAA 90 bp GAAATAAACTTGAGTAGCTTGGTTTGGGGAGTAGGAGTTTGCAAAACTAGTGACTTTTCCTATGCTTCCTaGTCACATGCACTGGAGCCA +
Preference number: 5 (lower is better)
Translates to: EINLSSLVWGVGVCKTSDFSYAS*SHALEP
Trigger: TGGCTCCAGTGCATGTGACAAGGAAGCATAGGAAAA...GTCACTAGTTTTGCAAACTCCTACTCCCCAAACCAAGCTACTCAAGTTTATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000325885.6
CDS-3UTR CAA 90 bp CTAGCAAAGTGCTCCTTATCTCTTAGCTACAATGCTATGAAATGTCAGTCTGCTCAAGCAATCCTCCAATaGTTCCAGGGTGTGATCTTG +
Preference number: 5 (lower is better)
Translates to: LAKCSLSLSYNAMKCQSAQAILQ*FQGVIL
Trigger: CAAGATCACACCCTGGAACAATTGGAGGATTGCTTG...AGCAGACTGACATTTCATAGCATTGTAGCTAAGAGATAAGGAGCACTTTGCTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325885.6
CDS-3UTR CAA 90 bp CTAGCAAAGTGCTCCTTATCTCTTAGCTACAATGCTATGAAATGTCAGTCTGCTCAGCATCAGTTTTACTaGCCCCAAGTCAGTGCATCA +
Preference number: 5 (lower is better)
Translates to: LAKCSLSLSYNAMKCQSAQHQFY*PQVSAS
Trigger: TGATGCACTGACTTGGGGCAAGTAAAACTGATGCTG...AGCAGACTGACATTTCATAGCATTGTAGCTAAGAGATAAGGAGCACTTTGCTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325885.6
CDS GCA 90 bp TGTGTTCCATCTGATGTGTTCATAGGCATTGACTACAACTTCAATTaGTTTAGGACAAGAATGGCAGGCCTGTATCACCTTATGGAACTG +
Preference number: 5 (lower is better)
Translates to: CVPSDVFIGIDYNFN*FRTRMAGLYHLMEL
Trigger: CAGTTCCATAAGGTGATACAGGCCTGCCATTCTTGTCCTAAAGCAATTGAAGTTGTAGTCAATGCCTATGAACACATCAGATGGAACACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325885.6
CDS-3UTR CAA 90 bp CCCTTTCATGGCTACAAGCTAATTTCAAAGCAGGCTGAGTCATCTTTAGATCAGGAATGGAACTTGGAGTaGTACAAAAGTGCAAAGCTG +
Preference number: 5 (lower is better)
Translates to: PFHGYKLISKQAESSLDQEWNLE*YKSAKL
Trigger: CAGCTTTGCACTTTTGTACAACTCCAAGTTCCATTC...CTGATCTAAAGATGACTCAGCCTGCTTTGAAATTAGCTTGTAGCCATGAAAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428113.5
CDS-3UTR CAA 90 bp GAAAACACCAAGTTTAAGAGGCCAATTGCAAAGCCTGCTATATGGCCATTTGAAAATTTTCCGAAGTCATaGGACTTTAGCGCCTCAAGG +
Preference number: 5 (lower is better)
Translates to: ENTKFKRPIAKPAIWPFENFPKS*DFSASR
Trigger: CCTTGAGGCGCTAAAGTCCAATGACTTCGGAAAATT...TTCAAATGGCCATATAGCAGGCTTTGCAATTGGCCTCTTAAACTTGGTGTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000325885.6
CDS-3UTR CAA 90 bp CATGGCTACAAGCTAATTTCAAAGCAGGCTGAGTCATCTTTAGATCAGTCATTCAATTTTCCGAAGTCATaGGACTTTAGCGCCTCAAGG +
Preference number: 5 (lower is better)
Translates to: HGYKLISKQAESSLDQSFNFPKS*DFSASR
Trigger: CCTTGAGGCGCTAAAGTCCAATGACTTCGGAAAATT...GAATGACTGATCTAAAGATGACTCAGCCTGCTTTGAAATTAGCTTGTAGCCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428113.5
CDS-3UTR CAA 90 bp ATTAGGTATGTAATGGAAGGTCAAAGAGGATCAGAGGTAGTTAGCCCAGGACTCAGTGTCCACATCTATTaGCCTTTGGATCAAAATAGC +
Preference number: 5 (lower is better)
Translates to: IRYVMEGQRGSEVVSPGLSVHIY*PLDQNS
Trigger: GCTATTTTGATCCAAAGGCAAATAGATGTGGACACT...GAGTCCTGGGCTAACTACCTCTGATCCTCTTTGACCTTCCATTACATACCTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428113.5
CDS-3UTR CAA 90 bp CTAGCAAAGTGCTCCTTATCTCTTAGCTACAATGCTATGAAATGTCAGTCTGCTGTCTCCTCATCTTGGTaGTTGGTCTTCATGTTCACA +
Preference number: 5 (lower is better)
Translates to: LAKCSLSLSYNAMKCQSAVSSSW*LVFMFT
Trigger: TGTGAACATGAAGACCAACAACCAAGATGAGGAGAC...AGCAGACTGACATTTCATAGCATTGTAGCTAAGAGATAAGGAGCACTTTGCTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325885.6
CDS-3UTR CAA 90 bp CATTCTTTAGTGGTGAATTTTGAGATTTTAGTGCACCCATCACTGGAGCAGTGTAGTTTAAGAGGCCAATaGCAAAGCCTGCTATATGGC +
Preference number: 5 (lower is better)
Translates to: HSLVVNFEILVHPSLEQCSLRGQ*QSLLYG
Trigger: GCCATATAGCAGGCTTTGCAATTGGCCTCTTAAACT...ACACTGCTCCAGTGATGGGTGCACTAAAATCTCAAAATTCACCACTAAAGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325885.6
CDS-3UTR CAA 90 bp CTAGCAAAGTGCTCCTTATCTCTTAGCTACAATGCTATGAAATGTCAGTCTGCTTCTGCACCTGTACTCTaGCCCCATCACTTTATATTG +
Preference number: 5 (lower is better)
Translates to: LAKCSLSLSYNAMKCQSASAPVL*PHHFIL
Trigger: CAATATAAAGTGATGGGGCAAGAGTACAGGTGCAGA...AGCAGACTGACATTTCATAGCATTGTAGCTAAGAGATAAGGAGCACTTTGCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325885.6
CDS-3UTR CAA 90 bp CTAGCAAAGTGCTCCTTATCTCTTAGCTACAATGCTATGAAATGTCAGTCTGCTTCACTCTGGATGTCTTaGCATCCTCATTGCTTAGCT +
Preference number: 5 (lower is better)
Translates to: LAKCSLSLSYNAMKCQSASLWMS*HPHCLA
Trigger: AGCTAAGCAATGAGGATGCAAAGACATCCAGAGTGA...AGCAGACTGACATTTCATAGCATTGTAGCTAAGAGATAAGGAGCACTTTGCTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325885.6
CDS-3UTR CAA 90 bp AAGCAGGCTGAGTCATCTTTAGATCAGTCATTCTGTTTAAAAGATGGCAAATGTCAGTTGATTGTAGCATaGTGGTCCAGTAGCACCAGA +
Preference number: 5 (lower is better)
Translates to: KQAESSLDQSFCLKDGKCQLIVA*WSSSTR
Trigger: TCTGGTGCTACTGGACCACAATGCTACAATCAACTG...ACATTTGCCATCTTTTAAACAGAATGACTGATCTAAAGATGACTCAGCCTGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428113.5
CDS-3UTR CAA 90 bp GAAATAAACTTGAGTAGCTTGGTTTGGGGAGTAGGAGTTTGCAAAACTAGTGACGAATGGAACTTGGAGTaGTACAAAAGTGCAAAGCTG +
Preference number: 5 (lower is better)
Translates to: EINLSSLVWGVGVCKTSDEWNLE*YKSAKL
Trigger: CAGCTTTGCACTTTTGTACAACTCCAAGTTCCATTC...GTCACTAGTTTTGCAAACTCCTACTCCCCAAACCAAGCTACTCAAGTTTATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000325885.6
CDS-3UTR CAA 90 bp CAAGCAATCCTCCAATTGTTCCAGGGTGTGATCTTGTTTTACTTTGTTAATTATATGGCAGCACAGCCGTaGATATCCATGAGATTGGCT +
Preference number: 5 (lower is better)
Translates to: QAILQLFQGVILFYFVNYMAAQP*ISMRLA
Trigger: AGCCAATCTCATGGATATCAACGGCTGTGCTGCCAT...ATAATTAACAAAGTAAAACAAGATCACACCCTGGAACAATTGGAGGATTGCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325885.6
CDS-3UTR CAA 90 bp GGTGATTGCCAGTTAACATTAAATGATAGCCTATTGGAATATCTGACATCATCTACATGGGACTCATCTTaGCATCTCCAGTCTCTGGCT +
Preference number: 5 (lower is better)
Translates to: GDCQLTLNDSLLEYLTSSTWDSS*HLQSLA
Trigger: AGCCAGAGACTGGAGATGCAAAGATGAGTCCCATGT...AGATGATGTCAGATATTCCAATAGGCTATCATTTAATGTTAACTGGCAATCACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325885.6
CDS-3UTR CAA 90 bp AGCAGTGTACACTGTACCCAATATGTAGTCTTTTATCCCTCACCCCACTCTCAATCACAACTGACAGATTaGTTTGCAATTTACTTCTGC +
Preference number: 5 (lower is better)
Translates to: SSVHCTQYVVFYPSPHSQSQLTD*FAIYFC
Trigger: GCAGAAGTAAATTGCAAACAAATCTGTCAGTTGTGA...TTGAGAGTGGGGTGAGGGATAAAAGACTACATATTGGGTACAGTGTACACTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325885.6
CDS-3UTR CAA 90 bp CTAGCAAAGTGCTCCTTATCTCTTAGCTACAATGCTATGAAATGTCAGTCTGCTGAACATCTTCTCCCTTaGTCCTCAGCATCAGTTTTA +
Preference number: 5 (lower is better)
Translates to: LAKCSLSLSYNAMKCQSAEHLLP*SSASVL
Trigger: TAAAACTGATGCTGAGGACAAAGGGAGAAGATGTTC...AGCAGACTGACATTTCATAGCATTGTAGCTAAGAGATAAGGAGCACTTTGCTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325885.6
CDS-3UTR CAA 90 bp GGTGATTGCCAGTTAACATTAAATGATAGCCTATTGGAATATCTGACATCATCTCAGTTGATTGTAGCATaGTGGTCCAGTAGCACCAGA +
Preference number: 5 (lower is better)
Translates to: GDCQLTLNDSLLEYLTSSQLIVA*WSSSTR
Trigger: TCTGGTGCTACTGGACCACAATGCTACAATCAACTG...AGATGATGTCAGATATTCCAATAGGCTATCATTTAATGTTAACTGGCAATCACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325885.6
CDS-3UTR CAA 90 bp GAAAACACCAAGTTTAAGAGGCCAATTGCAAAGCCTGCTATATGGCCATTTGAAAGTGTCCACATCTATTaGCCTTTGGATCAAAATAGC +
Preference number: 5 (lower is better)
Translates to: ENTKFKRPIAKPAIWPFESVHIY*PLDQNS
Trigger: GCTATTTTGATCCAAAGGCAAATAGATGTGGACACT...TTCAAATGGCCATATAGCAGGCTTTGCAATTGGCCTCTTAAACTTGGTGTTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325885.6
CDS-3UTR CAA 90 bp GAAATAAACTTGAGTAGCTTGGTTTGGGGAGTAGGAGTTTGCAAAACTAGTGACAGGCAACCAGTAACCTaGTTTATAAGATGCCAAAAC +
Preference number: 5 (lower is better)
Translates to: EINLSSLVWGVGVCKTSDRQPVT*FIRCQN
Trigger: GTTTTGGCATCTTATAAACAAGGTTACTGGTTGCCT...GTCACTAGTTTTGCAAACTCCTACTCCCCAAACCAAGCTACTCAAGTTTATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000325885.6
CDS-3UTR CAA 90 bp GAGTCATCTTTAGATCAGTCATTCTGTTTAAAAGATGGCAAATGTATGCCTGTCGTCTCCTCATCTTGGTaGTTGGTCTTCATGTTCACA +
Preference number: 5 (lower is better)
Translates to: ESSLDQSFCLKDGKCMPVVSSSW*LVFMFT
Trigger: TGTGAACATGAAGACCAACAACCAAGATGAGGAGAC...GACAGGCATACATTTGCCATCTTTTAAACAGAATGACTGATCTAAAGATGACTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428113.5
CDS-3UTR CAA 90 bp ATTATTTGCTACTCTTTTTCTCATTCTAGCTCTCACACCCAATTTCAAGCAAACAGACAAGGCTGCCATTaGAATCTTCCTCAACCTGCT +
Preference number: 5 (lower is better)
Translates to: IICYSFSHSSSHTQFQANRQGCH*NLPQPA
Trigger: AGCAGGTTGAGGAAGATTCAAATGGCAGCCTTGTCT...GTTTGCTTGAAATTGGGTGTGAGAGCTAGAATGAGAAAAAGAGTAGCAAATAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428113.5
CDS-3UTR CAA 90 bp CAAGCAATCCTCCAATTGTTCCAGGGTGTGATCTTGTTTTACTTTGTTAATTATAGAGGGGTTTTCCCATaGGGTCTACAGTTGATTGTA +
Preference number: 5 (lower is better)
Translates to: QAILQLFQGVILFYFVNYRGVFP*GLQLIV
Trigger: TACAATCAACTGTAGACCCAATGGGAAAACCCCTCT...ATAATTAACAAAGTAAAACAAGATCACACCCTGGAACAATTGGAGGATTGCTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000325885.6
CDS-3UTR CAA 90 bp GAAATAAACTTGAGTAGCTTGGTTTGGGGAGTAGGAGTTTGCAAAACTAGTGACCACATCTATTTGCCTTaGGATCAAAATAGCCTTCAA +
Preference number: 5 (lower is better)
Translates to: EINLSSLVWGVGVCKTSDHIYLP*DQNSLQ
Trigger: TTGAAGGCTATTTTGATCCAAAGGCAAATAGATGTG...GTCACTAGTTTTGCAAACTCCTACTCCCCAAACCAAGCTACTCAAGTTTATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000325885.6
CDS-3UTR CAA 90 bp GGTGATTGCCAGTTAACATTAAATGATAGCCTATTGGAATATCTGACATCATCTCCAGCTCCATCCAAGTaGCTGCAAAAGACATCATTT +
Preference number: 5 (lower is better)
Translates to: GDCQLTLNDSLLEYLTSSPAPSK*LQKTSF
Trigger: AAATGATGTCTTTTGCAGCAACTTGGATGGAGCTGG...AGATGATGTCAGATATTCCAATAGGCTATCATTTAATGTTAACTGGCAATCACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325885.6
CDS-3UTR CAA 90 bp CATTCTTTAGTGGTGAATTTTGAGATTTTAGTGCACCCATCACTGGAGCAGTGTAAGATTTCAATAGTTTaGGGGGTACAGGTGGTTTTT +
Preference number: 5 (lower is better)
Translates to: HSLVVNFEILVHPSLEQCKISIV*GVQVVF
Trigger: AAAAACCACCTGTACCCCCAAAACTATTGAAATCTT...ACACTGCTCCAGTGATGGGTGCACTAAAATCTCAAAATTCACCACTAAAGAATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000325885.6
CDS-3UTR CAA 90 bp CAAGCAATCCTCCAATTGTTCCAGGGTGTGATCTTGTTTTACTTTGTTAATTATTCCTCATCTTGGTTGTaGGTCTTCATGTTCACATTC +
Preference number: 5 (lower is better)
Translates to: QAILQLFQGVILFYFVNYSSSWL*VFMFTF
Trigger: GAATGTGAACATGAAGACCAACAACCAAGATGAGGA...ATAATTAACAAAGTAAAACAAGATCACACCCTGGAACAATTGGAGGATTGCTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325885.6
CDS-3UTR CAA 90 bp GGTGATTGCCAGTTAACATTAAATGATAGCCTATTGGAATATCTGACATCATCTGGGTACAGGTGGTTTTaGGTTACATGGATACATTCT +
Preference number: 5 (lower is better)
Translates to: GDCQLTLNDSLLEYLTSSGYRWF*VTWIHS
Trigger: AGAATGTATCCATGTAACCAAAAACCACCTGTACCC...AGATGATGTCAGATATTCCAATAGGCTATCATTTAATGTTAACTGGCAATCACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325885.6
CDS-3UTR CAA 90 bp GGTGATTGCCAGTTAACATTAAATGATAGCCTATTGGAATATCTGACATCATCTTTTCTCTTAACTAACTaGGCAGCTCCAGATTTAGTG +
Preference number: 5 (lower is better)
Translates to: GDCQLTLNDSLLEYLTSSFLLTN*AAPDLV
Trigger: CACTAAATCTGGAGCTGCCAAGTTAGTTAAGAGAAA...AGATGATGTCAGATATTCCAATAGGCTATCATTTAATGTTAACTGGCAATCACC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325885.6
CDS-3UTR CAA 90 bp GGTGATTGCCAGTTAACATTAAATGATAGCCTATTGGAATATCTGACATCATCTGCTCTATGGCATCTGTaGTGTAATGTTCTTCTAATG +
Preference number: 5 (lower is better)
Translates to: GDCQLTLNDSLLEYLTSSALWHL*CNVLLM
Trigger: CATTAGAAGAACATTACACAACAGATGCCATAGAGC...AGATGATGTCAGATATTCCAATAGGCTATCATTTAATGTTAACTGGCAATCACC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325885.6
CDS-3UTR CAA 90 bp ATTATTTGCTACTCTTTTTCTCATTCTAGCTCTCACACCCAATTTCAAGCAAACCACATCTATTTGCCTTaGGATCAAAATAGCCTTCAA +
Preference number: 5 (lower is better)
Translates to: IICYSFSHSSSHTQFQANHIYLP*DQNSLQ
Trigger: TTGAAGGCTATTTTGATCCAAAGGCAAATAGATGTG...GTTTGCTTGAAATTGGGTGTGAGAGCTAGAATGAGAAAAAGAGTAGCAAATAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428113.5
CDS GCA 72 bp GCCACCAGCTCCGAAAGGCCGAAGTGGGCAGCCGTGTaGAAGGGCGTCTCCTCATCTTGGTTGTTGGTCTTC +
Preference number: 6 (lower is better)
Translates to: ATSSERPKWAAV*KGVSSSWLLVF
Trigger: GAAGACCAACAACCAAGATGAGGAGACGCCCTTGCACACGGCTGCCCACTTCGGCCTTTCGGAGCTGGTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325885.6
ENST00000428113.5
CDS CCA 72 bp TCGGCGCCAGCTTCCAGCATCATGTGCATGAGCACGTaGTCACAGTTCCAGGCTGCCTTGTGGAGGGGAGAT +
Preference number: 6 (lower is better)
Translates to: SAPASSIMCMST*SQFQAALWRGD
Trigger: ATCTCCCCTCCACAAGGCAGCCTGGAACTGTGACCACGTGCTCATGCACATGATGCTGGAAGCTGGCGCCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325885.6
ENST00000428113.5
CDS TCA 72 bp GATTGGCTTCGGCGCCAGCTTCCAGCATCATGTGCATaGGCACGTGGTCACAGTTCCAGGCTGCCTTGTGGA +
Preference number: 6 (lower is better)
Translates to: DWLRRQLPASCA*ARGHSSRLPCG
Trigger: TCCACAAGGCAGCCTGGAACTGTGACCACGTGCTCATGCACATGATGCTGGAAGCTGGCGCCGAAGCCAATC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325885.6
ENST00000428113.5
CDS CCA 72 bp GCAGCAGGGCGCACGGAGGTGACCTTCAGCACGTACTaGATGGCAGCACAGCCGTTGATATCCATGAGATTG +
Preference number: 6 (lower is better)
Translates to: AAGRTEVTFSTY*MAAQPLISMRL
Trigger: CAATCTCATGGATATCAACGGCTGTGCTGCCATCCAGTACGTGCTGAAGGTCACCTCCGTGCGCCCTGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325885.6
ENST00000428113.5
CDS GCA 72 bp ATGAGATTGGCTTCGGCGCCAGCTTCCAGCATCATGTaGATGAGCACGTGGTCACAGTTCCAGGCTGCCTTG +
Preference number: 6 (lower is better)
Translates to: MRLASAPASSIM*MSTWSQFQAAL
Trigger: CAAGGCAGCCTGGAACTGTGACCACGTGCTCATGCACATGATGCTGGAAGCTGGCGCCGAAGCCAATCTCAT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325885.6
ENST00000428113.5
CDS CAA 90 bp AGGCCGAAGTGGGCAGCCGTGTGCAAGGGCGTCTCCTCATCTTGGTaGTTGGTCTTCATGTTCACATTCGCCCCTCTCCAAACCAATTGC +
Preference number: 6 (lower is better)
Translates to: RPKWAAVCKGVSSSW*LVFMFTFAPLQTNC
Trigger: GCAATTGGTTTGGAGAGGGGCGAATGTGAACATGAAGACCAACAACCAAGATGAGGAGACGCCCTTGCACACGGCTGCCCACTTCGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325885.6
ENST00000428113.5
CDS CAA 90 bp CGAAAGGCCGAAGTGGGCAGCCGTGTGCAAGGGCGTCTCCTCATCTaGGTTGTTGGTCTTCATGTTCACATTCGCCCCTCTCCAAACCAA +
Preference number: 6 (lower is better)
Translates to: RKAEVGSRVQGRLLI*VVGLHVHIRPSPNQ
Trigger: TTGGTTTGGAGAGGGGCGAATGTGAACATGAAGACCAACAACCAAGATGAGGAGACGCCCTTGCACACGGCTGCCCACTTCGGCCTTTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325885.6
ENST00000428113.5
CDS CAA 90 bp TTCAGCACGTACTGGATGGCAGCACAGCCGTTGATATCCATGAGATaGGCTTCGGCGCCAGCTTCCAGCATCATGTGCATGAGCACGTGG +
Preference number: 6 (lower is better)
Translates to: FSTYWMAAQPLISMR*ASAPASSIMCMSTW
Trigger: CCACGTGCTCATGCACATGATGCTGGAAGCTGGCGCCGAAGCCAATCTCATGGATATCAACGGCTGTGCTGCCATCCAGTACGTGCTGAA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325885.6
ENST00000428113.5
CDS CCA 72 bp AAGTGGGCAGCCGTGTGCAAGGGCGTCTCCTCATCTTaGTTGTTGGTCTTCATGTTCACATTCGCCCCTCTC +
Preference number: 6 (lower is better)
Translates to: KWAAVCKGVSSS*LLVFMFTFAPL
Trigger: GAGAGGGGCGAATGTGAACATGAAGACCAACAACCAAGATGAGGAGACGCCCTTGCACACGGCTGCCCACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325885.6
ENST00000428113.5
CDS CAA 72 bp GCAGCCGTGTGCAAGGGCGTCTCCTCATCTTGGTTGTaGGTCTTCATGTTCACATTCGCCCCTCTCCAAACC +
Preference number: 6 (lower is better)
Translates to: AAVCKGVSSSWL*VFMFTFAPLQT
Trigger: GGTTTGGAGAGGGGCGAATGTGAACATGAAGACCAACAACCAAGATGAGGAGACGCCCTTGCACACGGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325885.6
ENST00000428113.5
CDS CAA 72 bp TGGGCAGCCGTGTGCAAGGGCGTCTCCTCATCTTGGTaGTTGGTCTTCATGTTCACATTCGCCCCTCTCCAA +
Preference number: 6 (lower is better)
Translates to: WAAVCKGVSSSW*LVFMFTFAPLQ
Trigger: TTGGAGAGGGGCGAATGTGAACATGAAGACCAACAACCAAGATGAGGAGACGCCCTTGCACACGGCTGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325885.6
ENST00000428113.5
CDS CAA 72 bp GAAGTGGGCAGCCGTGTGCAAGGGCGTCTCCTCATCTaGGTTGTTGGTCTTCATGTTCACATTCGCCCCTCT +
Preference number: 6 (lower is better)
Translates to: EVGSRVQGRLLI*VVGLHVHIRPS
Trigger: AGAGGGGCGAATGTGAACATGAAGACCAACAACCAAGATGAGGAGACGCCCTTGCACACGGCTGCCCACTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325885.6
ENST00000428113.5
CDS CAA 90 bp CCGAAGTGGGCAGCCGTGTGCAAGGGCGTCTCCTCATCTTGGTTGTaGGTCTTCATGTTCACATTCGCCCCTCTCCAAACCAATTGCTTG +
Preference number: 6 (lower is better)
Translates to: PKWAAVCKGVSSSWL*VFMFTFAPLQTNCL
Trigger: CAAGCAATTGGTTTGGAGAGGGGCGAATGTGAACATGAAGACCAACAACCAAGATGAGGAGACGCCCTTGCACACGGCTGCCCACTTCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325885.6
ENST00000428113.5
CDS CCA 72 bp GCATTGTGGTCCAGTAGCACCAGAAGACATTCCACATaGCCAAACAAGACAGAGAGATGGAGGCCTGTGGCC +
Preference number: 6 (lower is better)
Translates to: ALWSSSTRRHST*PNKTERWRPVA
Trigger: GGCCACAGGCCTCCATCTCTCTGTCTTGTTTGGCCATGTGGAATGTCTTCTGGTGCTACTGGACCACAATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257621.4
ENST00000325885.6
ENST00000428113.5
CDS CCA 72 bp GGCTGCCATTTGAATCTTCCTCAACCTGCTGACCACTaGGCAGAGCCTCACCTTATGGAACTGTGGAGGGTA +
Preference number: 6 (lower is better)
Translates to: GCHLNLPQPADH*AEPHLMELWRV
Trigger: TACCCTCCACAGTTCCATAAGGTGAGGCTCTGCCCAGTGGTCAGCAGGTTGAGGAAGATTCAAATGGCAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428113.5
CDS CAA 72 bp ATGTGCATGAGCACGTGGTCACAGTTCCAGGCTGCCTaGTGGAGGGGAGATTTAAAGTCGTCATCTCGGGCA +
Preference number: 6 (lower is better)
Translates to: MCMSTWSQFQAA*WRGDLKSSSRA
Trigger: TGCCCGAGATGACGACTTTAAATCTCCCCTCCACAAGGCAGCCTGGAACTGTGACCACGTGCTCATGCACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325885.6
ENST00000428113.5
CDS CAA 90 bp TCCAGCATCATGTGCATGAGCACGTGGTCACAGTTCCAGGCTGCCTaGTGGAGGGGAGATTTAAAGTCGTCATCTCGGGCATTGACTTCG +
Preference number: 6 (lower is better)
Translates to: SSIMCMSTWSQFQAA*WRGDLKSSSRALTS
Trigger: CGAAGTCAATGCCCGAGATGACGACTTTAAATCTCCCCTCCACAAGGCAGCCTGGAACTGTGACCACGTGCTCATGCACATGATGCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325885.6
ENST00000428113.5
CDS TCA 72 bp CCGTCCATCCTTCCTCTCCCTCTGGAAGCTTTGTTGTaGTTTATCGAGAGAACAGCACCGAGCAAACAGGCG +
Preference number: 6 (lower is better)
Translates to: PSILPLPLEALL*FIERTAPSKQA
Trigger: CGCCTGTTTGCTCGGTGCTGTTCTCTCGATAAATCACAACAAAGCTTCCAGAGGGAGAGGAAGGATGGACGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428113.5
CDS TCA 72 bp CAGACAAGGCTGCCATTTGAATCTTCCTCAACCTGCTaGCCACTGGGCAGAGCCTCACCTTATGGAACTGTG +
Preference number: 6 (lower is better)
Translates to: QTRLPFESSSTC*PLGRASPYGTV
Trigger: CACAGTTCCATAAGGTGAGGCTCTGCCCAGTGGTCAGCAGGTTGAGGAAGATTCAAATGGCAGCCTTGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428113.5
CDS GCA 72 bp CATCATGTGCATGAGCACGTGGTCACAGTTCCAGGCTaGCTTGTGGAGGGGAGATTTAAAGTCGTCATCTCG +
Preference number: 6 (lower is better)
Translates to: HHVHEHVVTVPG*LVEGRFKVVIS
Trigger: CGAGATGACGACTTTAAATCTCCCCTCCACAAGGCAGCCTGGAACTGTGACCACGTGCTCATGCACATGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325885.6
ENST00000428113.5
CDS CAA 72 bp TTTCCGGAGAATCTTGGTCGCTGGCACGATGCTAGATaGTTCCGTTTCAGCGACTCTCTTTACAGGTGGTGG +
Preference number: 6 (lower is better)
Translates to: FPENLGRWHDAR*FRFSDSLYRWW
Trigger: CCACCACCTGTAAAGAGAGTCGCTGAAACGGAACAATCTAGCATCGTGCCAGCGACCAAGATTCTCCGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257621.4
CDS TCA 72 bp TCTGGGGTAGGTAGGGGTCACAAAGTCTTGAAACCATaGGTGTACAAGCAGACAACAATGTTGGCCACCCAG +
Preference number: 6 (lower is better)
Translates to: SGVGRGHKVLKP*VYKQTTMLATQ
Trigger: CTGGGTGGCCAACATTGTTGTCTGCTTGTACACTCATGGTTTCAAGACTTTGTGACCCCTACCTACCCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257621.4
CDS CAA 90 bp AAGTCATTGGACTTTAGCGCCTCAAGGAAATTTCTCTTAACTAACTaGGCAGCTCCAGATTTAGTGACAGGGGCAGTGGTGCCGTCCATC +
Preference number: 6 (lower is better)
Translates to: KSLDFSASRKFLLTN*AAPDLVTGAVVPSI
Trigger: GATGGACGGCACCACTGCCCCTGTCACTAAATCTGGAGCTGCCAAGTTAGTTAAGAGAAATTTCCTTGAGGCGCTAAAGTCCAATGACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325885.6
ENST00000428113.5
CDS CCA 72 bp GTTTTCCCATTGGGTCTACAGTTGATTGTAGCATTGTaGTCCAGTAGCACCAGAAGACATTCCACATGGCCA +
Preference number: 6 (lower is better)
Translates to: VFPLGLQLIVAL*SSSTRRHSTWP
Trigger: TGGCCATGTGGAATGTCTTCTGGTGCTACTGGACCACAATGCTACAATCAACTGTAGACCCAATGGGAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257621.4
ENST00000325885.6
ENST00000428113.5
CDS CAA 72 bp GACTTTAGCGCCTCAAGGAAATTTCTCTTAACTAACTaGGCAGCTCCAGATTTAGTGACAGGGGCAGTGGTG +
Preference number: 6 (lower is better)
Translates to: DFSASRKFLLTN*AAPDLVTGAVV
Trigger: CACCACTGCCCCTGTCACTAAATCTGGAGCTGCCAAGTTAGTTAAGAGAAATTTCCTTGAGGCGCTAAAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325885.6
ENST00000428113.5
CDS CAA 90 bp GACAACAATGTTGGCCACCCAGAAAGGCTTACCTCTCCAAACCAATaGCTTGGCACAGAGAATGGAACTTGGAGTTGTACAAAAGTGCAA +
Preference number: 6 (lower is better)
Translates to: DNNVGHPERLTSPNQ*LGTENGTWSCTKVQ
Trigger: TTGCACTTTTGTACAACTCCAAGTTCCATTCTCTGTGCCAAGCAATTGGTTTGGAGAGGTAAGCCTTTCTGGGTGGCCAACATTGTTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257621.4
CDS CAA 90 bp CCCCTCTCCAAACCAATTGCTTGGCACAGAGAATGGAACTTGGAGTaGTACAAAAGTGCAAAGCTGTGTGTCCACTTAAGGAGTAGCAAT +
Preference number: 6 (lower is better)
Translates to: PLSKPIAWHREWNLE*YKSAKLCVHLRSSN
Trigger: ATTGCTACTCCTTAAGTGGACACACAGCTTTGCACTTTTGTACAACTCCAAGTTCCATTCTCTGTGCCAAGCAATTGGTTTGGAGAGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325885.6
ENST00000428113.5
CDS GCA 72 bp GTCTTCATGTTCACATTCGCCCCTCTCCAAACCAATTaGTTGGCACAGAGAATGGAACTTGGAGTTGTACAA +
Preference number: 6 (lower is better)
Translates to: VFMFTFAPLQTN*LAQRMELGVVQ
Trigger: TTGTACAACTCCAAGTTCCATTCTCTGTGCCAAGCAATTGGTTTGGAGAGGGGCGAATGTGAACATGAAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325885.6
ENST00000428113.5
CDS CAA 90 bp TACCTCTCCAAACCAATTGCTTGGCACAGAGAATGGAACTTGGAGTaGTACAAAAGTGCAAAGCTGTGTGTCCACTTAAGGAGTAGCAAT +
Preference number: 6 (lower is better)
Translates to: YLSKPIAWHREWNLE*YKSAKLCVHLRSSN
Trigger: ATTGCTACTCCTTAAGTGGACACACAGCTTTGCACTTTTGTACAACTCCAAGTTCCATTCTCTGTGCCAAGCAATTGGTTTGGAGAGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257621.4
CDS CAA 72 bp AAACCAATTGCTTGGCACAGAGAATGGAACTTGGAGTaGTACAAAAGTGCAAAGCTGTGTGTCCACTTAAGG +
Preference number: 6 (lower is better)
Translates to: KPIAWHREWNLE*YKSAKLCVHLR
Trigger: CCTTAAGTGGACACACAGCTTTGCACTTTTGTACAACTCCAAGTTCCATTCTCTGTGCCAAGCAATTGGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257621.4
ENST00000325885.6
ENST00000428113.5
CDS GCA 72 bp TCTGATGTGTTCATAGGCATTGACTACAACTTCAATTaGTTTAGGACAAGAATGGCAGGCCTGTATCACCTT +
Preference number: 6 (lower is better)
Translates to: SDVFIGIDYNFN*FRTRMAGLYHL
Trigger: AAGGTGATACAGGCCTGCCATTCTTGTCCTAAAGCAATTGAAGTTGTAGTCAATGCCTATGAACACATCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325885.6
CDS GCA 72 bp TTGTGTAATGTTCTTCTAATGGCACATCTCGATAAGTaGATGAGAGTCCTTGGAGAGTTACAGCACACAGTA +
Preference number: 6 (lower is better)
Translates to: LCNVLLMAHLDK*MRVLGELQHTV
Trigger: TACTGTGTGCTGTAACTCTCCAAGGACTCTCATGCACTTATCGAGATGTGCCATTAGAAGAACATTACACAA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325885.6