RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ASB2 (Homo sapiens)

Ensembl gene IDs: ENSG00000100628, ENSG00000278693

Ensembl transcript IDs: ENST00000315988.8, ENST00000553883.1, ENST00000555019.6, ENST00000555287.1, ENST00000555374.1, ENST00000555507.5, ENST00000556062.5, ENST00000556337.1, ENST00000556793.1, ENST00000557613.1, ENST00000612647.3, ENST00000625368.1, ENST00000625949.1, ENST00000626017.2, ENST00000626296.2, ENST00000626322.1, ENST00000626794.1, ENST00000628228.1, ENST00000628500.1, ENST00000629617.2

Found 673 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR TCA 90 bp CAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGGCCCTGAGACCCAGTaGGATCCTGGTAGCTGTCCA +
Preference number: 2 (lower is better)
Translates to: QAPPTPYLGPRLHLSLWRGPETQ*DPGSCP
Trigger: TGGACAGCTACCAGGATCTCACTGGGTCTCAGGGCC...TCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
3UTR-3UTR TCA 90 bp CAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGACAAAGCTCTGGGCCCTaGGACCCAGTGAGATCCTGG +
Preference number: 2 (lower is better)
Translates to: QAPPTPYLGPRLHLSLWRQSSGP*DPVRSW
Trigger: CCAGGATCTCACTGGGTCTCAGGGCCCAGAGCTTTG...TCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
3UTR-3UTR CCA 90 bp CCCAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAAGGTCCCCTTGGAGTTaGGAACACCGACGTCCTGAG +
Preference number: 2 (lower is better)
Translates to: PRLPLPPTLGHVFILVFGRSPWS*EHRRPE
Trigger: CTCAGGACGTCGGTGTTCCCAACTCCAAGGGGACCT...TCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
3UTR-3UTR CCA 90 bp CCCAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGTCACCAGGTCCCCTTaGAGTTGGGAACACCGACGT +
Preference number: 2 (lower is better)
Translates to: PRLPLPPTLGHVFILVFGVTRSP*SWEHRR
Trigger: ACGTCGGTGTTCCCAACTCCAAGGGGACCTGGTGAC...TCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
3UTR-3UTR GCA 90 bp CCCAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGAACACCTCAAGCTCTaGCCTGGCCCCAGGAATAGA +
Preference number: 2 (lower is better)
Translates to: PRLPLPPTLGHVFILVFGEHLKL*PGPRNR
Trigger: TCTATTCCTGGGGCCAGGGCAGAGCTTGAGGTGTTC...TCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
3UTR-3UTR GCA 90 bp CAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGAACACCTCAAGCTCTaGCCTGGCCCCAGGAATAGA +
Preference number: 2 (lower is better)
Translates to: QAPPTPYLGPRLHLSLWREHLKL*PGPRNR
Trigger: TCTATTCCTGGGGCCAGGGCAGAGCTTGAGGTGTTC...TCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
3UTR-3UTR TCA 90 bp CCCAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGGAACACCGACGTCCTaGGACTTAGTAAGAAGAGTC +
Preference number: 2 (lower is better)
Translates to: PRLPLPPTLGHVFILVFGGTPTS*DLVRRV
Trigger: GACTCTTCTTACTAAGTCTCAGGACGTCGGTGTTCC...TCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
3UTR-3UTR TCA 90 bp CCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGAAAGCTCTGAAGGGCCCTGAGACCCAGTaGGATCCTGGTAGCTGTCCA +
Preference number: 2 (lower is better)
Translates to: PPTLGHVFILVFGEKALKGPETQ*DPGSCP
Trigger: TGGACAGCTACCAGGATCTCACTGGGTCTCAGGGCC...CTTCAGAGCTTTCTCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
3UTR-3UTR TCA 90 bp CCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGAAAGCTCTGAAGCAAAGCTCTGGGCCCTaGGACCCAGTGAGATCCTGG +
Preference number: 2 (lower is better)
Translates to: PPTLGHVFILVFGEKALKQSSGP*DPVRSW
Trigger: CCAGGATCTCACTGGGTCTCAGGGCCCAGAGCTTTG...CTTCAGAGCTTTCTCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
3UTR-3UTR GCA 90 bp AGGTTTCTGCCATTCCTGAAGGTAGAGAAGGTCTGGGATCTGCTCATCAGTTTGGAGAGGGAGGCAGCCTaGAGCCTCGTCTGTCACCAG +
Preference number: 2 (lower is better)
Translates to: RFLPFLKVEKVWDLLISLEREAA*SLVCHQ
Trigger: CTGGTGACAGACGAGGCTGCAGGCTGCCTCCCTCTC...CAAACTGATGAGCAGATCCCAGACCTTCTCTACCTTCAGGAATGGCAGAAACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
3UTR-3UTR CCA 90 bp CCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGAAAGCTCTGAAGAGGTCCCCTTGGAGTTaGGAACACCGACGTCCTGAG +
Preference number: 2 (lower is better)
Translates to: PPTLGHVFILVFGEKALKRSPWS*EHRRPE
Trigger: CTCAGGACGTCGGTGTTCCCAACTCCAAGGGGACCT...CTTCAGAGCTTTCTCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
3UTR-3UTR CCA 90 bp AGGTTTCTGCCATTCCTGAAGGTAGAGAAGGTCTGGGATCTGCTCATCAGTTTGCTCTGGCCAAAGCTCTaGGCCCTGAGACCCAGTGAG +
Preference number: 2 (lower is better)
Translates to: RFLPFLKVEKVWDLLISLLWPKL*ALRPSE
Trigger: CTCACTGGGTCTCAGGGCCCAGAGCTTTGGCCAGAG...CAAACTGATGAGCAGATCCCAGACCTTCTCTACCTTCAGGAATGGCAGAAACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
3UTR-3UTR TCA 90 bp TTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGAAAGCTCTGAAGTCAAGTGGTGGCCCTGAGACCCAGTaGGATCCTGGTAGCTGTCCA +
Preference number: 2 (lower is better)
Translates to: LGHVFILVFGEKALKSSGGPETQ*DPGSCP
Trigger: TGGACAGCTACCAGGATCTCACTGGGTCTCAGGGCC...ACCACTTGACTTCAGAGCTTTCTCTCCAAAGACTAAGATGAAGACGTGGCCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
3UTR-3UTR CCA 90 bp AGGTTTCTGCCATTCCTGAAGGTAGAGAAGGTCTGGGATCTGCTCATCAGTTTGGTCACCAGGTCCCCTTaGAGTTGGGAACACCGACGT +
Preference number: 2 (lower is better)
Translates to: RFLPFLKVEKVWDLLISLVTRSP*SWEHRR
Trigger: ACGTCGGTGTTCCCAACTCCAAGGGGACCTGGTGAC...CAAACTGATGAGCAGATCCCAGACCTTCTCTACCTTCAGGAATGGCAGAAACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
3UTR-3UTR CCA 90 bp CAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGAAAGGTAGAGAAGGTCTaGGATCTGCTCATCAGTTTG +
Preference number: 2 (lower is better)
Translates to: QAPPTPYLGPRLHLSLWRKVEKV*DLLISL
Trigger: CAAACTGATGAGCAGATCCCAGACCTTCTCTACCTT...TCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
3UTR-3UTR TCA 90 bp CCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGAAAGCTCTGAAGGGAACACCGACGTCCTaGGACTTAGTAAGAAGAGTC +
Preference number: 2 (lower is better)
Translates to: PPTLGHVFILVFGEKALKGTPTS*DLVRRV
Trigger: GACTCTTCTTACTAAGTCTCAGGACGTCGGTGTTCC...CTTCAGAGCTTTCTCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
3UTR-3UTR GCA 90 bp CCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGAAAGCTCTGAAGACACATTCTGTTCTCTaGTCTGGCCAAAGCTCTGGG +
Preference number: 2 (lower is better)
Translates to: PPTLGHVFILVFGEKALKTHSVL*SGQSSG
Trigger: CCCAGAGCTTTGGCCAGAGCAGAGAACAGAATGTGT...CTTCAGAGCTTTCTCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
3UTR-3UTR CCA 90 bp TTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGAAAGCTCTGAAGTCAAGTGGTGTCACCAGGTCCCCTTaGAGTTGGGAACACCGACGT +
Preference number: 2 (lower is better)
Translates to: LGHVFILVFGEKALKSSGVTRSP*SWEHRR
Trigger: ACGTCGGTGTTCCCAACTCCAAGGGGACCTGGTGAC...ACCACTTGACTTCAGAGCTTTCTCTCCAAAGACTAAGATGAAGACGTGGCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
3UTR-3UTR GCA 90 bp AGGTCTGGGATCTGCTCATCAGTTTGTAAACAAATGATTCTTCTCCTTGACACAGAGAGGGAGGCAGCCTaGAGCCTCGTCTGTCACCAG +
Preference number: 2 (lower is better)
Translates to: RSGICSSVCKQMILLLDTEREAA*SLVCHQ
Trigger: CTGGTGACAGACGAGGCTGCAGGCTGCCTCCCTCTC...TGTGTCAAGGAGAAGAATCATTTGTTTACAAACTGATGAGCAGATCCCAGACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
3UTR-3UTR GCA 90 bp CAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGAAGAAGGTCTGGGATCTaGTCATCAGTTTGTAAACAA +
Preference number: 2 (lower is better)
Translates to: QAPPTPYLGPRLHLSLWRRRSGI*SSVCKQ
Trigger: TTGTTTACAAACTGATGAGCAGATCCCAGACCTTCT...TCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
3UTR-3UTR CCA 90 bp AGGTCTGGGATCTGCTCATCAGTTTGTAAACAAATGATTCTTCTCCTTGACACACTCTGGCCAAAGCTCTaGGCCCTGAGACCCAGTGAG +
Preference number: 2 (lower is better)
Translates to: RSGICSSVCKQMILLLDTLWPKL*ALRPSE
Trigger: CTCACTGGGTCTCAGGGCCCAGAGCTTTGGCCAGAG...TGTGTCAAGGAGAAGAATCATTTGTTTACAAACTGATGAGCAGATCCCAGACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
3UTR-3UTR GCA 90 bp CCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGAAAGCTCTGAAGAGAAGGTCTGGGATCTaGTCATCAGTTTGTAAACAA +
Preference number: 2 (lower is better)
Translates to: PPTLGHVFILVFGEKALKRRSGI*SSVCKQ
Trigger: TTGTTTACAAACTGATGAGCAGATCCCAGACCTTCT...CTTCAGAGCTTTCTCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
3UTR-3UTR CAA 90 bp CCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGAAAGCTCTGAAGTGTCACCAGGTCCCCTaGGAGTTGGGAACACCGACG +
Preference number: 3 (lower is better)
Translates to: PPTLGHVFILVFGEKALKCHQVP*ELGTPT
Trigger: CGTCGGTGTTCCCAACTCCAAGGGGACCTGGTGACA...CTTCAGAGCTTTCTCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
3UTR CCA 72 bp CTTGACACATTCTGTTCTCTGCTCTGGCCAAAGCTCTaGGCCCTGAGACCCAGTGAGATCCTGGTAGCTGTC +
Preference number: 3 (lower is better)
Translates to: LDTFCSLLWPKL*ALRPSEILVAV
Trigger: GACAGCTACCAGGATCTCACTGGGTCTCAGGGCCCAGAGCTTTGGCCAGAGCAGAGAACAGAATGTGTCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
3UTR-3UTR CAA 90 bp TTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGAAAGCTCTGAAGTCAAGTGGTTGTCACCAGGTCCCCTaGGAGTTGGGAACACCGACG +
Preference number: 3 (lower is better)
Translates to: LGHVFILVFGEKALKSSGCHQVP*ELGTPT
Trigger: CGTCGGTGTTCCCAACTCCAAGGGGACCTGGTGACA...ACCACTTGACTTCAGAGCTTTCTCTCCAAAGACTAAGATGAAGACGTGGCCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
3UTR-3UTR CAA 90 bp AGGTCTGGGATCTGCTCATCAGTTTGTAAACAAATGATTCTTCTCCTTGACACATGTCACCAGGTCCCCTaGGAGTTGGGAACACCGACG +
Preference number: 3 (lower is better)
Translates to: RSGICSSVCKQMILLLDTCHQVP*ELGTPT
Trigger: CGTCGGTGTTCCCAACTCCAAGGGGACCTGGTGACA...TGTGTCAAGGAGAAGAATCATTTGTTTACAAACTGATGAGCAGATCCCAGACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR TCA 90 bp CAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGACCGCGGGCGCGTCGTTaGACCTGCTGGAGGGCTGCG +
Preference number: 4 (lower is better)
Translates to: QAPPTPYLGPRLHLSLWRPRARR*TCWRAA
Trigger: CGCAGCCCTCCAGCAGGTTCAACGACGCGCCCGCGG...TCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR TCA 90 bp CAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGACCAGGAGGACATCGATaGTGGGCCCCGCCCAGCGGC +
Preference number: 4 (lower is better)
Translates to: QAPPTPYLGPRLHLSLWRPGGHR*WAPPSG
Trigger: GCCGCTGGGCGGGGCCCATCATCGATGTCCTCCTGG...TCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR TCA 90 bp CGTCTGTCACCAGGTCCCCTTGGAGTTGGGAACACCGACGTCCTGAGACTTAGTCCAGGAGGACATCGATaGTGGGCCCCGCCCAGCGGC +
Preference number: 4 (lower is better)
Translates to: RLSPGPLGVGNTDVLRLSPGGHR*WAPPSG
Trigger: GCCGCTGGGCGGGGCCCATCATCGATGTCCTCCTGG...ACTAAGTCTCAGGACGTCGGTGTTCCCAACTCCAAGGGGACCTGGTGACAGACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR GCA 90 bp CGTCTGTCACCAGGTCCCCTTGGAGTTGGGAACACCGACGTCCTGAGACTTAGTCGCCGCTACGGCGTATaGGCGTGCGGCTGGTCACCG +
Preference number: 4 (lower is better)
Translates to: RLSPGPLGVGNTDVLRLSRRYGV*ACGWSP
Trigger: CGGTGACCAGCCGCACGCGCATACGCCGTAGCGGCG...ACTAAGTCTCAGGACGTCGGTGTTCCCAACTCCAAGGGGACCTGGTGACAGACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR GCA 90 bp CAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGACGCTCGGCCGCCAGGTaGAGCGGACTGACGCCGCTA +
Preference number: 4 (lower is better)
Translates to: QAPPTPYLGPRLHLSLWRRSAAR*SGLTPL
Trigger: TAGCGGCGTCAGTCCGCTGCACCTGGCGGCCGAGCG...TCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR GCA 90 bp CAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGGGTCGGCGCCGTGTTaGAGCAGCAGCTCGGTGGCG +
Preference number: 4 (lower is better)
Translates to: QAPPTPYLGPRLHLSLWRGSAPC*SSSSVA
Trigger: CGCCACCGAGCTGCTGCTGCAACACGGCGCCGACCC...TCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR TCA 90 bp CAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGACCAGGTGCAGCGGACTaGCGCCGCTACGGCGTATGC +
Preference number: 4 (lower is better)
Translates to: QAPPTPYLGPRLHLSLWRPGAAD*RRYGVC
Trigger: GCATACGCCGTAGCGGCGTCAGTCCGCTGCACCTGG...TCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR GCA 90 bp CGTCTGTCACCAGGTCCCCTTGGAGTTGGGAACACCGACGTCCTGAGACTTAGTGCCAAGCTGTACCTGTaGCCCCCACGCCCACCTGCC +
Preference number: 4 (lower is better)
Translates to: RLSPGPLGVGNTDVLRLSAKLYL*PPRPPA
Trigger: GGCAGGTGGGCGTGGGGGGCACAGGTACAGCTTGGC...ACTAAGTCTCAGGACGTCGGTGTTCCCAACTCCAAGGGGACCTGGTGACAGACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315988.8
ENST00000629617.2
CDS-3UTR GCA 90 bp CCCAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGACGGTCCAGCCGCGGTTaGAGCGGTGGTTGGTGTCTG +
Preference number: 4 (lower is better)
Translates to: PRLPLPPTLGHVFILVFGRSSRG*SGGWCL
Trigger: CAGACACCAACCACCGCTGCAACCGCGGCTGGACCG...TCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR GCA 90 bp CCCAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGATACGGCGTATGCGCGTaGGGCTGGTCACCGGCAGCA +
Preference number: 4 (lower is better)
Translates to: PRLPLPPTLGHVFILVFGYGVCA*GWSPAA
Trigger: TGCTGCCGGTGACCAGCCGCACGCGCATACGCCGTA...TCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR GCA 90 bp CGTCTGTCACCAGGTCCCCTTGGAGTTGGGAACACCGACGTCCTGAGACTTAGTGCACCTCGTCGTGGTTaGGCTCGGCCGCCAGGTGCA +
Preference number: 4 (lower is better)
Translates to: RLSPGPLGVGNTDVLRLSAPRRG*ARPPGA
Trigger: TGCACCTGGCGGCCGAGCGCAACCACGACGAGGTGC...ACTAAGTCTCAGGACGTCGGTGTTCCCAACTCCAAGGGGACCTGGTGACAGACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR GCA 90 bp CCCAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGCGGGTGCGGGCCGTTaGCGTAGAGGCATGAGAAGC +
Preference number: 4 (lower is better)
Translates to: PRLPLPPTLGHVFILVFGAGAGR*RRGMRS
Trigger: GCTTCTCATGCCTCTACGGCAACGGCCCGCACCCGC...TCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CCA 90 bp CGTCTGTCACCAGGTCCCCTTGGAGTTGGGAACACCGACGTCCTGAGACTTAGTTCCAGCACCTCGTCGTaGTTGCGCTCGGCCGCCAGG +
Preference number: 4 (lower is better)
Translates to: RLSPGPLGVGNTDVLRLSSSTSS*LRSAAR
Trigger: CCTGGCGGCCGAGCGCAACCACGACGAGGTGCTGGA...ACTAAGTCTCAGGACGTCGGTGTTCCCAACTCCAAGGGGACCTGGTGACAGACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CCA 90 bp CGTCTGTCACCAGGTCCCCTTGGAGTTGGGAACACCGACGTCCTGAGACTTAGTGTGCGCAGGCAGCCGTaGCGGATGGCCACGAGCAAG +
Preference number: 4 (lower is better)
Translates to: RLSPGPLGVGNTDVLRLSVRRQP*RMATSK
Trigger: CTTGCTCGTGGCCATCCGCCACGGCTGCCTGCGCAC...ACTAAGTCTCAGGACGTCGGTGTTCCCAACTCCAAGGGGACCTGGTGACAGACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR TCA 90 bp CAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGATCACCCAGGAGGATGTaGGCCGTGGTCGGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: QAPPTPYLGPRLHLSLWRSPRRM*AVVGRS
Trigger: GGACCTGCCGACCACGGCTCACATCCTCCTGGGTGA...TCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000315988.8
ENST00000629617.2
CDS-3UTR TCA 90 bp CCCAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGGCGTCGGCACCCTGTaGCAGCAGAAACTCCACCAC +
Preference number: 4 (lower is better)
Translates to: PRLPLPPTLGHVFILVFGGVGTL*QQKLHH
Trigger: GTGGTGGAGTTTCTGCTGTCACAGGGTGCCGACGCC...TCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR TCA 90 bp CCCAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGTTGCCGTAGAGGCATaGGAAGCAGGGCTCGCCGTC +
Preference number: 4 (lower is better)
Translates to: PRLPLPPTLGHVFILVFGVAVEA*EAGLAV
Trigger: GACGGCGAGCCCTGCTTCTCATGCCTCTACGGCAAC...TCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR TCA 90 bp CCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGAAAGCTCTGAAGCCGCGGGCGCGTCGTTaGACCTGCTGGAGGGCTGCG +
Preference number: 4 (lower is better)
Translates to: PPTLGHVFILVFGEKALKPRARR*TCWRAA
Trigger: CGCAGCCCTCCAGCAGGTTCAACGACGCGCCCGCGG...CTTCAGAGCTTTCTCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR GCA 90 bp CGTCTGTCACCAGGTCCCCTTGGAGTTGGGAACACCGACGTCCTGAGACTTAGTCGGTCCAGCCGCGGTTaGAGCGGTGGTTGGTGTCTG +
Preference number: 4 (lower is better)
Translates to: RLSPGPLGVGNTDVLRLSRSSRG*SGGWCL
Trigger: CAGACACCAACCACCGCTGCAACCGCGGCTGGACCG...ACTAAGTCTCAGGACGTCGGTGTTCCCAACTCCAAGGGGACCTGGTGACAGACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR GCA 90 bp CAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGACGGTCCAGCCGCGGTTaGAGCGGTGGTTGGTGTCTG +
Preference number: 4 (lower is better)
Translates to: QAPPTPYLGPRLHLSLWRRSSRG*SGGWCL
Trigger: CAGACACCAACCACCGCTGCAACCGCGGCTGGACCG...TCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR GCA 90 bp CAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGATACGGCGTATGCGCGTaGGGCTGGTCACCGGCAGCA +
Preference number: 4 (lower is better)
Translates to: QAPPTPYLGPRLHLSLWRYGVCA*GWSPAA
Trigger: TGCTGCCGGTGACCAGCCGCACGCGCATACGCCGTA...TCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR GCA 90 bp CCCAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAAGTACAGCGCGGAGCTaGGCCGGTCTTCGTAGAGGC +
Preference number: 4 (lower is better)
Translates to: PRLPLPPTLGHVFILVFGSTARS*AGLRRG
Trigger: GCCTCTACGAAGACCGGCGCAGCTCCGCGCTGTACT...TCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR GCA 90 bp CCAGGTCCCCTTGGAGTTGGGAACACCGACGTCCTGAGACTTAGTAAGAAGAGTGGGTCGGCGCCGTGTTaGAGCAGCAGCTCGGTGGCG +
Preference number: 4 (lower is better)
Translates to: PGPLGVGNTDVLRLSKKSGSAPC*SSSSVA
Trigger: CGCCACCGAGCTGCTGCTGCAACACGGCGCCGACCC...ACTCTTCTTACTAAGTCTCAGGACGTCGGTGTTCCCAACTCCAAGGGGACCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR GCA 90 bp CGTCTGTCACCAGGTCCCCTTGGAGTTGGGAACACCGACGTCCTGAGACTTAGTGCAGCAGCTGCATTGTaGGCAGGCAGCCGTGGCGGA +
Preference number: 4 (lower is better)
Translates to: RLSPGPLGVGNTDVLRLSAAAAL*AGSRGG
Trigger: TCCGCCACGGCTGCCTGCGCACAATGCAGCTGCTGC...ACTAAGTCTCAGGACGTCGGTGTTCCCAACTCCAAGGGGACCTGGTGACAGACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR GCA 90 bp CAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGCAGCAGCTGCATTGTaGGCAGGCAGCCGTGGCGGA +
Preference number: 4 (lower is better)
Translates to: QAPPTPYLGPRLHLSLWRAAAAL*AGSRGG
Trigger: TCCGCCACGGCTGCCTGCGCACAATGCAGCTGCTGC...TCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR GCA 90 bp CGTCTGTCACCAGGTCCCCTTGGAGTTGGGAACACCGACGTCCTGAGACTTAGTGCGGGTGCGGGCCGTTaGCGTAGAGGCATGAGAAGC +
Preference number: 4 (lower is better)
Translates to: RLSPGPLGVGNTDVLRLSAGAGR*RRGMRS
Trigger: GCTTCTCATGCCTCTACGGCAACGGCCCGCACCCGC...ACTAAGTCTCAGGACGTCGGTGTTCCCAACTCCAAGGGGACCTGGTGACAGACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR GCA 90 bp CCCAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGAGGGAGGCAGCCTaGAGCCTCGTCTGTCACCAG +
Preference number: 4 (lower is better)
Translates to: PRLPLPPTLGHVFILVFGEREAA*SLVCHQ
Trigger: CTGGTGACAGACGAGGCTGCAGGCTGCCTCCCTCTC...TCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CCA 90 bp CCCAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGACTGGTCGATGGTCCCTaGGTACGCTCGCTGCAGGAC +
Preference number: 4 (lower is better)
Translates to: PRLPLPPTLGHVFILVFGLVDGP*VRSLQD
Trigger: GTCCTGCAGCGAGCGTACCCAGGGACCATCGACCAG...TCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CCA 90 bp CGTCTGTCACCAGGTCCCCTTGGAGTTGGGAACACCGACGTCCTGAGACTTAGTGGGTGCGCTGGTCGATaGTCCCTGGGTACGCTCGCT +
Preference number: 4 (lower is better)
Translates to: RLSPGPLGVGNTDVLRLSGCAGR*SLGTLA
Trigger: AGCGAGCGTACCCAGGGACCATCGACCAGCGCACCC...ACTAAGTCTCAGGACGTCGGTGTTCCCAACTCCAAGGGGACCTGGTGACAGACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR TCA 90 bp CCCAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGACGCTGGCCTGCGTGTTaGTGTCAGCACCGTACTTGG +
Preference number: 4 (lower is better)
Translates to: PRLPLPPTLGHVFILVFGRWPAC*CQHRTW
Trigger: CCAAGTACGGTGCTGACATCAACACGCAGGCCAGCG...TCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR TCA 90 bp CGTCTGTCACCAGGTCCCCTTGGAGTTGGGAACACCGACGTCCTGAGACTTAGTGGCGTCGGCACCCTGTaGCAGCAGAAACTCCACCAC +
Preference number: 4 (lower is better)
Translates to: RLSPGPLGVGNTDVLRLSGVGTL*QQKLHH
Trigger: GTGGTGGAGTTTCTGCTGTCACAGGGTGCCGACGCC...ACTAAGTCTCAGGACGTCGGTGTTCCCAACTCCAAGGGGACCTGGTGACAGACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR TCA 90 bp CAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGGCGTCGGCACCCTGTaGCAGCAGAAACTCCACCAC +
Preference number: 4 (lower is better)
Translates to: QAPPTPYLGPRLHLSLWRGVGTL*QQKLHH
Trigger: GTGGTGGAGTTTCTGCTGTCACAGGGTGCCGACGCC...TCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR TCA 90 bp CGTCTGTCACCAGGTCCCCTTGGAGTTGGGAACACCGACGTCCTGAGACTTAGTGTTGCCGTAGAGGCATaGGAAGCAGGGCTCGCCGTC +
Preference number: 4 (lower is better)
Translates to: RLSPGPLGVGNTDVLRLSVAVEA*EAGLAV
Trigger: GACGGCGAGCCCTGCTTCTCATGCCTCTACGGCAAC...ACTAAGTCTCAGGACGTCGGTGTTCCCAACTCCAAGGGGACCTGGTGACAGACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR TCA 90 bp CCCAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGGCCCTGAGACCCAGTaGGATCCTGGTAGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: PRLPLPPTLGHVFILVFGGPETQ*DPGSCP
Trigger: TGGACAGCTACCAGGATCTCACTGGGTCTCAGGGCC...TCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR GCA 90 bp CCCAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGACGAACTCTCAGGAGGTaGAGTGGACCTGGAGGGTGC +
Preference number: 4 (lower is better)
Translates to: PRLPLPPTLGHVFILVFGRTLRR*SGPGGC
Trigger: GCACCCTCCAGGTCCACTGCACCTCCTGAGAGTTCG...TCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000315988.8
ENST00000629617.2
CDS-3UTR GCA 90 bp CAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGACACCTGGCCATAGTATaGGGCCTCGTGCAGCGGCAG +
Preference number: 4 (lower is better)
Translates to: QAPPTPYLGPRLHLSLWRHLAIV*GLVQRQ
Trigger: CTGCCGCTGCACGAGGCCGCATACTATGGCCAGGTG...TCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR GCA 90 bp CCCAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGATTTCCTCCTGCAGGGTaGGCTGGTCGATGGTCCCTG +
Preference number: 4 (lower is better)
Translates to: PRLPLPPTLGHVFILVFGFPPAG*AGRWSL
Trigger: CAGGGACCATCGACCAGCGCACCCTGCAGGAGGAAA...TCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR GCA 90 bp CCCAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGCGTTGTCGCTGGCCTaGGTGTTGATGTCAGCACCG +
Preference number: 4 (lower is better)
Translates to: PRLPLPPTLGHVFILVFGALSLA*VLMSAP
Trigger: CGGTGCTGACATCAACACGCAGGCCAGCGACAACGC...TCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR GCA 90 bp CCCAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGATTCTTGGAGGCGATGTaGAGCGGGAGCAAGCCGTCC +
Preference number: 4 (lower is better)
Translates to: PRLPLPPTLGHVFILVFGFLEAM*SGSKPS
Trigger: GGACGGCTTGCTCCCGCTGCACATCGCCTCCAAGAA...TCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR GCA 90 bp CCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGAAAGCTCTGAAGCGCCGCTACGGCGTATaGGCGTGCGGCTGGTCACCG +
Preference number: 4 (lower is better)
Translates to: PPTLGHVFILVFGEKALKRRYGV*ACGWSP
Trigger: CGGTGACCAGCCGCACGCGCATACGCCGTAGCGGCG...CTTCAGAGCTTTCTCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR GCA 90 bp AACACCGACGTCCTGAGACTTAGTAAGAAGAGTCTGAGGGGCTACTCCTCTCTCCGCCGCTACGGCGTATaGGCGTGCGGCTGGTCACCG +
Preference number: 4 (lower is better)
Translates to: NTDVLRLSKKSLRGYSSLRRYGV*ACGWSP
Trigger: CGGTGACCAGCCGCACGCGCATACGCCGTAGCGGCG...GAGAGAGGAGTAGCCCCTCAGACTCTTCTTACTAAGTCTCAGGACGTCGGTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR GCA 90 bp CCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGAAAGCTCTGAAGCGCTCGGCCGCCAGGTaGAGCGGACTGACGCCGCTA +
Preference number: 4 (lower is better)
Translates to: PPTLGHVFILVFGEKALKRSAAR*SGLTPL
Trigger: TAGCGGCGTCAGTCCGCTGCACCTGGCGGCCGAGCG...CTTCAGAGCTTTCTCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR GCA 90 bp AACACCGACGTCCTGAGACTTAGTAAGAAGAGTCTGAGGGGCTACTCCTCTCTCGGGTCGGCGCCGTGTTaGAGCAGCAGCTCGGTGGCG +
Preference number: 4 (lower is better)
Translates to: NTDVLRLSKKSLRGYSSLGSAPC*SSSSVA
Trigger: CGCCACCGAGCTGCTGCTGCAACACGGCGCCGACCC...GAGAGAGGAGTAGCCCCTCAGACTCTTCTTACTAAGTCTCAGGACGTCGGTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR GCA 90 bp CGTCTGTCACCAGGTCCCCTTGGAGTTGGGAACACCGACGTCCTGAGACTTAGTTGGTCCAGCAGCAGCTaGATTGTGCGCAGGCAGCCG +
Preference number: 4 (lower is better)
Translates to: RLSPGPLGVGNTDVLRLSWSSSS*IVRRQP
Trigger: CGGCTGCCTGCGCACAATGCAGCTGCTGCTGGACCA...ACTAAGTCTCAGGACGTCGGTGTTCCCAACTCCAAGGGGACCTGGTGACAGACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR GCA 90 bp CAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGATGGTCCAGCAGCAGCTaGATTGTGCGCAGGCAGCCG +
Preference number: 4 (lower is better)
Translates to: QAPPTPYLGPRLHLSLWRWSSSS*IVRRQP
Trigger: CGGCTGCCTGCGCACAATGCAGCTGCTGCTGGACCA...TCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR GCA 90 bp CAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGACCCCGAGTGCTGATCTaGGTGGCCATCCTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: QAPPTPYLGPRLHLSLWRPRVLI*VAILLH
Trigger: GTGGAGGAGGATGGCCACGCAGATCAGCACTCGGGG...TCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000555019.6
ENST00000612647.3
CDS-3UTR GCA 90 bp CGTCTGTCACCAGGTCCCCTTGGAGTTGGGAACACCGACGTCCTGAGACTTAGTCCCCGAGTGCTGATCTaGGTGGCCATCCTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: RLSPGPLGVGNTDVLRLSPRVLI*VAILLH
Trigger: GTGGAGGAGGATGGCCACGCAGATCAGCACTCGGGG...ACTAAGTCTCAGGACGTCGGTGTTCCCAACTCCAAGGGGACCTGGTGACAGACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555019.6
ENST00000612647.3
CDS-3UTR CCA 90 bp CCCAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGGTGCAGTGGACCTaGAGGGTGCAGAGCAGGAGT +
Preference number: 4 (lower is better)
Translates to: PRLPLPPTLGHVFILVFGEVQWT*RVQSRS
Trigger: ACTCCTGCTCTGCACCCTCCAGGTCCACTGCACCTC...TCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000315988.8
ENST00000629617.2
CDS-3UTR CCA 90 bp CGTCTGTCACCAGGTCCCCTTGGAGTTGGGAACACCGACGTCCTGAGACTTAGTTTGGAACAAGCCCATTaGGGCCCGGGCCGGCGAACT +
Preference number: 4 (lower is better)
Translates to: RLSPGPLGVGNTDVLRLSLEQAH*GPGRRT
Trigger: AGTTCGCCGGCCCGGGCCCCAATGGGCTTGTTCCAA...ACTAAGTCTCAGGACGTCGGTGTTCCCAACTCCAAGGGGACCTGGTGACAGACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CCA 90 bp CCCAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAAGGAGACAGTCCAGGTaGCCCCTGCACGTTGCCAAG +
Preference number: 4 (lower is better)
Translates to: PRLPLPPTLGHVFILVFGRRQSR*PLHVAK
Trigger: CTTGGCAACGTGCAGGGGCCACCTGGACTGTCTCCT...TCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CCA 90 bp CCCAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGATCCAACTGTCCACTCTaGGCGGCCACGAACAAGGGG +
Preference number: 4 (lower is better)
Translates to: PRLPLPPTLGHVFILVFGSNCPL*AATNKG
Trigger: CCCCTTGTTCGTGGCCGCCCAGAGTGGACAGTTGGA...TCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CCA 90 bp CAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGTATGCGCGTGCGGCTaGTCACCGGCAGCAGCATCT +
Preference number: 4 (lower is better)
Translates to: QAPPTPYLGPRLHLSLWRVCACG*SPAAAS
Trigger: AGATGCTGCTGCCGGTGACCAGCCGCACGCGCATAC...TCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CCA 90 bp CCAGGTCCCCTTGGAGTTGGGAACACCGACGTCCTGAGACTTAGTAAGAAGAGTGTGCGCAGGCAGCCGTaGCGGATGGCCACGAGCAAG +
Preference number: 4 (lower is better)
Translates to: PGPLGVGNTDVLRLSKKSVRRQP*RMATSK
Trigger: CTTGCTCGTGGCCATCCGCCACGGCTGCCTGCGCAC...ACTCTTCTTACTAAGTCTCAGGACGTCGGTGTTCCCAACTCCAAGGGGACCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CCA 90 bp CCCAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGACTCTGGCCAAAGCTCTaGGCCCTGAGACCCAGTGAG +
Preference number: 4 (lower is better)
Translates to: PRLPLPPTLGHVFILVFGLWPKL*ALRPSE
Trigger: CTCACTGGGTCTCAGGGCCCAGAGCTTTGGCCAGAG...TCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CCA 90 bp CCCAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAACTCCTCCTGCCCAATaGTACACTGGCTGCCCCGAG +
Preference number: 4 (lower is better)
Translates to: PRLPLPPTLGHVFILVFGTPPAQ*YTGCPE
Trigger: CTCGGGGCAGCCAGTGTACCATTGGGCAGGAGGAGT...TCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000555019.6
ENST00000612647.3
CDS-3UTR CCA 90 bp CAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGGCCTCAGCAGTGGTTaGGCCCCTTGTCTTGTCCGC +
Preference number: 4 (lower is better)
Translates to: QAPPTPYLGPRLHLSLWRGLSSG*APCLVR
Trigger: GCGGACAAGACAAGGGGCCCAACCACTGCTGAGGCC...TCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000555019.6
ENST00000612647.3
CDS-3UTR CCA 90 bp CGTCTGTCACCAGGTCCCCTTGGAGTTGGGAACACCGACGTCCTGAGACTTAGTGGGCAGGTTGGCGGTTaGTACATGCAGACGCGGTGG +
Preference number: 4 (lower is better)
Translates to: RLSPGPLGVGNTDVLRLSGQVGG*YMQTRW
Trigger: CCACCGCGTCTGCATGTACCAACCGCCAACCTGCCC...ACTAAGTCTCAGGACGTCGGTGTTCCCAACTCCAAGGGGACCTGGTGACAGACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555019.6
ENST00000612647.3
CDS-3UTR TCA 90 bp CGTCTGTCACCAGGTCCCCTTGGAGTTGGGAACACCGACGTCCTGAGACTTAGTCCACGAACAAGGGGGTaGTGCCGTAGGCGTTCTTGG +
Preference number: 4 (lower is better)
Translates to: RLSPGPLGVGNTDVLRLSPRTRG*CRRRSW
Trigger: CCAAGAACGCCTACGGCATCACCCCCTTGTTCGTGG...ACTAAGTCTCAGGACGTCGGTGTTCCCAACTCCAAGGGGACCTGGTGACAGACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR TCA 90 bp CCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGAAAGCTCTGAAGCCAGGTGCAGCGGACTaGCGCCGCTACGGCGTATGC +
Preference number: 4 (lower is better)
Translates to: PPTLGHVFILVFGEKALKPGAAD*RRYGVC
Trigger: GCATACGCCGTAGCGGCGTCAGTCCGCTGCACCTGG...CTTCAGAGCTTTCTCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR TCA 90 bp AGGTTTCTGCCATTCCTGAAGGTAGAGAAGGTCTGGGATCTGCTCATCAGTTTGCCGCGGGCGCGTCGTTaGACCTGCTGGAGGGCTGCG +
Preference number: 4 (lower is better)
Translates to: RFLPFLKVEKVWDLLISLPRARR*TCWRAA
Trigger: CGCAGCCCTCCAGCAGGTTCAACGACGCGCCCGCGG...CAAACTGATGAGCAGATCCCAGACCTTCTCTACCTTCAGGAATGGCAGAAACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR TCA 90 bp CAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGACGCAGTCGGCAAAGGTaGGCCAGAGGTCTTGGAGGT +
Preference number: 4 (lower is better)
Translates to: QAPPTPYLGPRLHLSLWRRSRQR*ARGLGG
Trigger: ACCTCCAAGACCTCTGGCTCACCTTTGCCGACTGCG...TCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR TCA 90 bp CGTCTGTCACCAGGTCCCCTTGGAGTTGGGAACACCGACGTCCTGAGACTTAGTCGCAGTCGGCAAAGGTaGGCCAGAGGTCTTGGAGGT +
Preference number: 4 (lower is better)
Translates to: RLSPGPLGVGNTDVLRLSRSRQR*ARGLGG
Trigger: ACCTCCAAGACCTCTGGCTCACCTTTGCCGACTGCG...ACTAAGTCTCAGGACGTCGGTGTTCCCAACTCCAAGGGGACCTGGTGACAGACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR TCA 90 bp CGTCTGTCACCAGGTCCCCTTGGAGTTGGGAACACCGACGTCCTGAGACTTAGTCAAAGCTCTGGGCCCTaGGACCCAGTGAGATCCTGG +
Preference number: 4 (lower is better)
Translates to: RLSPGPLGVGNTDVLRLSQSSGP*DPVRSW
Trigger: CCAGGATCTCACTGGGTCTCAGGGCCCAGAGCTTTG...ACTAAGTCTCAGGACGTCGGTGTTCCCAACTCCAAGGGGACCTGGTGACAGACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR TCA 90 bp AACACCGACGTCCTGAGACTTAGTAAGAAGAGTCTGAGGGGCTACTCCTCTCTCGGCTGCCCCGAGTGCTaGTCTGCGTGGCCATCCTCC +
Preference number: 4 (lower is better)
Translates to: NTDVLRLSKKSLRGYSSLGCPEC*SAWPSS
Trigger: GGAGGATGGCCACGCAGATCAGCACTCGGGGCAGCC...GAGAGAGGAGTAGCCCCTCAGACTCTTCTTACTAAGTCTCAGGACGTCGGTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555019.6
ENST00000612647.3
CDS-3UTR GCA 90 bp CCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGAAAGCTCTGAAGGCCAAGCTGTACCTGTaGCCCCCACGCCCACCTGCC +
Preference number: 4 (lower is better)
Translates to: PPTLGHVFILVFGEKALKAKLYL*PPRPPA
Trigger: GGCAGGTGGGCGTGGGGGGCACAGGTACAGCTTGGC...CTTCAGAGCTTTCTCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000315988.8
ENST00000629617.2
CDS-3UTR GCA 90 bp CAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGAACGGCTGTTTCCTCCTaGAGGGTGCGCTGGTCGATG +
Preference number: 4 (lower is better)
Translates to: QAPPTPYLGPRLHLSLWRTAVSS*RVRWSM
Trigger: CATCGACCAGCGCACCCTGCAGGAGGAAACAGCCGT...TCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR GCA 90 bp CAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGACGGCCTCCGCGTTCTTaGGCTCGCAGGCTTTGTAGA +
Preference number: 4 (lower is better)
Translates to: QAPPTPYLGPRLHLSLWRRPPRS*ARRLCR
Trigger: TCTACAAAGCCTGCGAGCGCAAGAACGCGGAGGCCG...TCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR GCA 90 bp CCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGAAAGCTCTGAAGGCACCTCGTCGTGGTTaGGCTCGGCCGCCAGGTGCA +
Preference number: 4 (lower is better)
Translates to: PPTLGHVFILVFGEKALKAPRRG*ARPPGA
Trigger: TGCACCTGGCGGCCGAGCGCAACCACGACGAGGTGC...CTTCAGAGCTTTCTCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR GCA 90 bp CCAGGTCCCCTTGGAGTTGGGAACACCGACGTCCTGAGACTTAGTAAGAAGAGTGCAGCAGCTGCATTGTaGGCAGGCAGCCGTGGCGGA +
Preference number: 4 (lower is better)
Translates to: PGPLGVGNTDVLRLSKKSAAAAL*AGSRGG
Trigger: TCCGCCACGGCTGCCTGCGCACAATGCAGCTGCTGC...ACTCTTCTTACTAAGTCTCAGGACGTCGGTGTTCCCAACTCCAAGGGGACCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR GCA 90 bp CCAGGTCCCCTTGGAGTTGGGAACACCGACGTCCTGAGACTTAGTAAGAAGAGTGCGGGTGCGGGCCGTTaGCGTAGAGGCATGAGAAGC +
Preference number: 4 (lower is better)
Translates to: PGPLGVGNTDVLRLSKKSAGAGR*RRGMRS
Trigger: GCTTCTCATGCCTCTACGGCAACGGCCCGCACCCGC...ACTCTTCTTACTAAGTCTCAGGACGTCGGTGTTCCCAACTCCAAGGGGACCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR GCA 90 bp CGTCTGTCACCAGGTCCCCTTGGAGTTGGGAACACCGACGTCCTGAGACTTAGTTTGGCGGTTGGTACATaGAGACGCGGTGGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: RLSPGPLGVGNTDVLRLSLAVGT*RRGGLS
Trigger: GCTGAGGCCACCGCGTCTGCATGTACCAACCGCCAA...ACTAAGTCTCAGGACGTCGGTGTTCCCAACTCCAAGGGGACCTGGTGACAGACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555019.6
ENST00000612647.3
CDS-3UTR CCA 90 bp CGTCTGTCACCAGGTCCCCTTGGAGTTGGGAACACCGACGTCCTGAGACTTAGTTCCGCAGGCGCCAGCTaGGAGGTCTTGAACAAGCTG +
Preference number: 4 (lower is better)
Translates to: RLSPGPLGVGNTDVLRLSSAGAS*EVLNKL
Trigger: CAGCTTGTTCAAGACCTCCCAGCTGGCGCCTGCGGA...ACTAAGTCTCAGGACGTCGGTGTTCCCAACTCCAAGGGGACCTGGTGACAGACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CCA 90 bp CCCAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGCCAGCCCTCCTTGTTaGGCTCTGCGAGATTCTTCC +
Preference number: 4 (lower is better)
Translates to: PRLPLPPTLGHVFILVFGASPPC*ALRDSS
Trigger: GGAAGAATCTCGCAGAGCCCAACAAGGAGGGCTGGC...TCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CCA 90 bp CGTCTGTCACCAGGTCCCCTTGGAGTTGGGAACACCGACGTCCTGAGACTTAGTAGGAGACAGTCCAGGTaGCCCCTGCACGTTGCCAAG +
Preference number: 4 (lower is better)
Translates to: RLSPGPLGVGNTDVLRLSRRQSR*PLHVAK
Trigger: CTTGGCAACGTGCAGGGGCCACCTGGACTGTCTCCT...ACTAAGTCTCAGGACGTCGGTGTTCCCAACTCCAAGGGGACCTGGTGACAGACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CCA 90 bp CAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGATCCAACTGTCCACTCTaGGCGGCCACGAACAAGGGG +
Preference number: 4 (lower is better)
Translates to: QAPPTPYLGPRLHLSLWRSNCPL*AATNKG
Trigger: CCCCTTGTTCGTGGCCGCCCAGAGTGGACAGTTGGA...TCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CCA 90 bp AACACCGACGTCCTGAGACTTAGTAAGAAGAGTCTGAGGGGCTACTCCTCTCTCTCCAGCACCTCGTCGTaGTTGCGCTCGGCCGCCAGG +
Preference number: 4 (lower is better)
Translates to: NTDVLRLSKKSLRGYSSLSSTSS*LRSAAR
Trigger: CCTGGCGGCCGAGCGCAACCACGACGAGGTGCTGGA...GAGAGAGGAGTAGCCCCTCAGACTCTTCTTACTAAGTCTCAGGACGTCGGTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CCA 90 bp CCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGAAAGCTCTGAAGGTGCGCAGGCAGCCGTaGCGGATGGCCACGAGCAAG +
Preference number: 4 (lower is better)
Translates to: PPTLGHVFILVFGEKALKVRRQP*RMATSK
Trigger: CTTGCTCGTGGCCATCCGCCACGGCTGCCTGCGCAC...CTTCAGAGCTTTCTCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CCA 90 bp CAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGAAGGCGGTGGGGTGCGTaGCGATATAGGCGTCGATGT +
Preference number: 4 (lower is better)
Translates to: QAPPTPYLGPRLHLSLWRRRWGA*RYRRRC
Trigger: ACATCGACGCCTATATCGCCACGCACCCCACCGCCT...TCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CCA 90 bp CGTCTGTCACCAGGTCCCCTTGGAGTTGGGAACACCGACGTCCTGAGACTTAGTCGGTGGCCTCAGCAGTaGTTGGGCCCCTTGTCTTGT +
Preference number: 4 (lower is better)
Translates to: RLSPGPLGVGNTDVLRLSRWPQQ*LGPLSC
Trigger: ACAAGACAAGGGGCCCAACCACTGCTGAGGCCACCG...ACTAAGTCTCAGGACGTCGGTGTTCCCAACTCCAAGGGGACCTGGTGACAGACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555019.6
ENST00000612647.3
CDS-3UTR TCA 90 bp CAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGACCCTGCGGGGCTGGATaGGAGATTCATGGCAAAGCA +
Preference number: 4 (lower is better)
Translates to: QAPPTPYLGPRLHLSLWRPCGAG*EIHGKA
Trigger: TGCTTTGCCATGAATCTCTCATCCAGCCCCGCAGGG...TCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000315988.8
ENST00000629617.2
CDS-3UTR TCA 90 bp CCCAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGACAGGGAGAGACTGACTaGCAGACACAGGGCTCTGAA +
Preference number: 4 (lower is better)
Translates to: PRLPLPPTLGHVFILVFGQGETD*QTQGSE
Trigger: TTCAGAGCCCTGTGTCTGTCAGTCAGTCTCTCCCTG...TCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000315988.8
ENST00000629617.2
CDS-3UTR TCA 90 bp CCCAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGACGTACACGTTGTTGTTaGCCACCGCGAAGTACAGCG +
Preference number: 4 (lower is better)
Translates to: PRLPLPPTLGHVFILVFGRTRCC*PPRSTA
Trigger: CGCTGTACTTCGCGGTGGTCAACAACAACGTGTACG...TCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR TCA 90 bp CCAGGTCCCCTTGGAGTTGGGAACACCGACGTCCTGAGACTTAGTAAGAAGAGTGTTGCCGTAGAGGCATaGGAAGCAGGGCTCGCCGTC +
Preference number: 4 (lower is better)
Translates to: PGPLGVGNTDVLRLSKKSVAVEA*EAGLAV
Trigger: GACGGCGAGCCCTGCTTCTCATGCCTCTACGGCAAC...ACTCTTCTTACTAAGTCTCAGGACGTCGGTGTTCCCAACTCCAAGGGGACCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR GCA 90 bp CCAGGTCCCCTTGGAGTTGGGAACACCGACGTCCTGAGACTTAGTAAGAAGAGTCACCTGGCCATAGTATaGGGCCTCGTGCAGCGGCAG +
Preference number: 4 (lower is better)
Translates to: PGPLGVGNTDVLRLSKKSHLAIV*GLVQRQ
Trigger: CTGCCGCTGCACGAGGCCGCATACTATGGCCAGGTG...ACTCTTCTTACTAAGTCTCAGGACGTCGGTGTTCCCAACTCCAAGGGGACCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR GCA 90 bp CCAGGTCCCCTTGGAGTTGGGAACACCGACGTCCTGAGACTTAGTAAGAAGAGTCCTGGGTACGCTCGCTaGAGGACTTTCAGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: PGPLGVGNTDVLRLSKKSPGYAR*RTFRQP
Trigger: GGGCTGCCTGAAAGTCCTGCAGCGAGCGTACCCAGG...ACTCTTCTTACTAAGTCTCAGGACGTCGGTGTTCCCAACTCCAAGGGGACCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR GCA 90 bp CAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGAAGTCCAGGTGGCCCCTaGACGTTGCCAAGTAAACGG +
Preference number: 4 (lower is better)
Translates to: QAPPTPYLGPRLHLSLWRSPGGP*TLPSKR
Trigger: CCGTTTACTTGGCAACGTGCAGGGGCCACCTGGACT...TCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR GCA 90 bp CCCAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGACCTCATGCTCATTCTTaGAGGCCTCGTAGAGGGCAG +
Preference number: 4 (lower is better)
Translates to: PRLPLPPTLGHVFILVFGPHAHS*RPRRGQ
Trigger: CTGCCCTCTACGAGGCCTGCAAGAATGAGCATGAGG...TCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR GCA 90 bp CCCAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGATCCACCACCTCCTCATaGTCATTCTTGCAGGCCTCG +
Preference number: 4 (lower is better)
Translates to: PRLPLPPTLGHVFILVFGSTTSS*SFLQAS
Trigger: CGAGGCCTGCAAGAATGAGCATGAGGAGGTGGTGGA...TCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR GCA 90 bp AGGTTTCTGCCATTCCTGAAGGTAGAGAAGGTCTGGGATCTGCTCATCAGTTTGCGCTCGGCCGCCAGGTaGAGCGGACTGACGCCGCTA +
Preference number: 4 (lower is better)
Translates to: RFLPFLKVEKVWDLLISLRSAAR*SGLTPL
Trigger: TAGCGGCGTCAGTCCGCTGCACCTGGCGGCCGAGCG...CAAACTGATGAGCAGATCCCAGACCTTCTCTACCTTCAGGAATGGCAGAAACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR GCA 90 bp CCAGGTCCCCTTGGAGTTGGGAACACCGACGTCCTGAGACTTAGTAAGAAGAGTTGGTCCAGCAGCAGCTaGATTGTGCGCAGGCAGCCG +
Preference number: 4 (lower is better)
Translates to: PGPLGVGNTDVLRLSKKSWSSSS*IVRRQP
Trigger: CGGCTGCCTGCGCACAATGCAGCTGCTGCTGGACCA...ACTCTTCTTACTAAGTCTCAGGACGTCGGTGTTCCCAACTCCAAGGGGACCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR GCA 90 bp AACACCGACGTCCTGAGACTTAGTAAGAAGAGTCTGAGGGGCTACTCCTCTCTCGCGGGTGCGGGCCGTTaGCGTAGAGGCATGAGAAGC +
Preference number: 4 (lower is better)
Translates to: NTDVLRLSKKSLRGYSSLAGAGR*RRGMRS
Trigger: GCTTCTCATGCCTCTACGGCAACGGCCCGCACCCGC...GAGAGAGGAGTAGCCCCTCAGACTCTTCTTACTAAGTCTCAGGACGTCGGTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR GCA 90 bp CCCAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAAGGCTGTACTCCTCCTaGCCAATGGTACACTGGCTG +
Preference number: 4 (lower is better)
Translates to: PRLPLPPTLGHVFILVFGRLYSS*PMVHWL
Trigger: CAGCCAGTGTACCATTGGGCAGGAGGAGTACAGCCT...TCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000555019.6
ENST00000612647.3
CDS-3UTR GCA 90 bp CCCAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGACATCCTCGCTCAGGCTaGTGTACAGGCTGTACTCCT +
Preference number: 4 (lower is better)
Translates to: PRLPLPPTLGHVFILVFGHPRSG*CTGCTP
Trigger: AGGAGTACAGCCTGTACAGCAGCCTGAGCGAGGATG...TCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000555019.6
ENST00000612647.3
CDS-3UTR GCA 90 bp CCCAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGATGCTCGATGGCCATCTaGACCAGTTCATCCTCGCTC +
Preference number: 4 (lower is better)
Translates to: PRLPLPPTLGHVFILVFGCSMAI*TSSSSL
Trigger: GAGCGAGGATGAACTGGTGCAGATGGCCATCGAGCA...TCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000555019.6
ENST00000612647.3
CDS-3UTR GCA 90 bp CAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGATTGTCCGCTAGGCTCTaGTCGATGGCCATCTGCACC +
Preference number: 4 (lower is better)
Translates to: QAPPTPYLGPRLHLSLWRLSARL*SMAICT
Trigger: GGTGCAGATGGCCATCGAGCAGAGCCTAGCGGACAA...TCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000555019.6
ENST00000612647.3
CDS-3UTR GCA 90 bp CAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGAAGGAAGCTGCAATCCTaGCTTCCGTTCCTCCGGGTG +
Preference number: 4 (lower is better)
Translates to: QAPPTPYLGPRLHLSLWRRKLQS*LPFLRV
Trigger: CACCCGGAGGAACGGAAGGCAGGATTGCAGCTTCCT...TCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000612647.3
CDS-3UTR CCA 90 bp CCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGAAAGCTCTGAAGGCTCAGGCTCACTGCTaGCCAGGCAGATCCCTGCGG +
Preference number: 4 (lower is better)
Translates to: PPTLGHVFILVFGEKALKAQAHC*PGRSLR
Trigger: CCGCAGGGATCTGCCTGGCCAGCAGTGAGCCTGAGC...CTTCAGAGCTTTCTCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315988.8
ENST00000629617.2
CDS-3UTR CCA 90 bp CCAGGTCCCCTTGGAGTTGGGAACACCGACGTCCTGAGACTTAGTAAGAAGAGTCTGGTCGATGGTCCCTaGGTACGCTCGCTGCAGGAC +
Preference number: 4 (lower is better)
Translates to: PGPLGVGNTDVLRLSKKSLVDGP*VRSLQD
Trigger: GTCCTGCAGCGAGCGTACCCAGGGACCATCGACCAG...ACTCTTCTTACTAAGTCTCAGGACGTCGGTGTTCCCAACTCCAAGGGGACCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CCA 90 bp CCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGAAAGCTCTGAAGGGGTGCGCTGGTCGATaGTCCCTGGGTACGCTCGCT +
Preference number: 4 (lower is better)
Translates to: PPTLGHVFILVFGEKALKGCAGR*SLGTLA
Trigger: AGCGAGCGTACCCAGGGACCATCGACCAGCGCACCC...CTTCAGAGCTTTCTCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CCA 90 bp CCCAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGATCTCTCGGGATTTGTTaGAGATGTCCGGCTCTGCCC +
Preference number: 4 (lower is better)
Translates to: PRLPLPPTLGHVFILVFGSLGIC*RCPALP
Trigger: GGGCAGAGCCGGACATCTCCAACAAATCCCGAGAGA...TCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CCA 90 bp CCCAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGATGCCGTAGGCGTTCTTaGATTCCACCTTGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: PRLPLPPTLGHVFILVFGCRRRS*IPPWLL
Trigger: GAGGAGCCAAGGTGGAATCCAAGAACGCCTACGGCA...TCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CCA 90 bp CCCAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGACCTTGTTGGTCTTGTTaGCGTCGGCACCCTGTGACA +
Preference number: 4 (lower is better)
Translates to: PRLPLPPTLGHVFILVFGPCWSC*RRHPVT
Trigger: TGTCACAGGGTGCCGACGCCAACAAGACCAACAAGG...TCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CCA 90 bp CAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGCAAGCCGTCCTTGTTaGTCTTGTTGGCGTCGGCAC +
Preference number: 4 (lower is better)
Translates to: QAPPTPYLGPRLHLSLWRASRPC*SCWRRH
Trigger: GTGCCGACGCCAACAAGACCAACAAGGACGGCTTGC...TCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CCA 90 bp CCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGAAAGCTCTGAAGTGGCGGGGAAGGCGGTaGGGTGCGTGGCGATATAGG +
Preference number: 4 (lower is better)
Translates to: PPTLGHVFILVFGEKALKWRGRR*GAWRYR
Trigger: CCTATATCGCCACGCACCCCACCGCCTTCCCCGCCA...CTTCAGAGCTTTCTCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CCA 90 bp AACACCGACGTCCTGAGACTTAGTAAGAAGAGTCTGAGGGGCTACTCCTCTCTCTGGCGGGGAAGGCGGTaGGGTGCGTGGCGATATAGG +
Preference number: 4 (lower is better)
Translates to: NTDVLRLSKKSLRGYSSLWRGRR*GAWRYR
Trigger: CCTATATCGCCACGCACCCCACCGCCTTCCCCGCCA...GAGAGAGGAGTAGCCCCTCAGACTCTTCTTACTAAGTCTCAGGACGTCGGTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CCA 90 bp CCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGAAAGCTCTGAAGAGAACTGCACCACGCTaGGCTCCTTGTCGGCCGCGG +
Preference number: 4 (lower is better)
Translates to: PPTLGHVFILVFGEKALKRTAPR*APCRPR
Trigger: CCGCGGCCGACAAGGAGCCCAGCGTGGTGCAGTTCT...CTTCAGAGCTTTCTCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CCA 90 bp AACACCGACGTCCTGAGACTTAGTAAGAAGAGTCTGAGGGGCTACTCCTCTCTCAGAACTGCACCACGCTaGGCTCCTTGTCGGCCGCGG +
Preference number: 4 (lower is better)
Translates to: NTDVLRLSKKSLRGYSSLRTAPR*APCRPR
Trigger: CCGCGGCCGACAAGGAGCCCAGCGTGGTGCAGTTCT...GAGAGAGGAGTAGCCCCTCAGACTCTTCTTACTAAGTCTCAGGACGTCGGTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CCA 90 bp CGTCTGTCACCAGGTCCCCTTGGAGTTGGGAACACCGACGTCCTGAGACTTAGTCCAGCGGCTCACCTCTaGGGCAGATACGAACTCACA +
Preference number: 4 (lower is better)
Translates to: RLSPGPLGVGNTDVLRLSPAAHL*GRYELT
Trigger: TGTGAGTTCGTATCTGCCCCAGAGGTGAGCCGCTGG...ACTAAGTCTCAGGACGTCGGTGTTCCCAACTCCAAGGGGACCTGGTGACAGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CCA 90 bp CAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGAAGGTCCCCTTGGAGTTaGGAACACCGACGTCCTGAG +
Preference number: 4 (lower is better)
Translates to: QAPPTPYLGPRLHLSLWRRSPWS*EHRRPE
Trigger: CTCAGGACGTCGGTGTTCCCAACTCCAAGGGGACCT...TCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CCA 90 bp CGTCTGTCACCAGGTCCCCTTGGAGTTGGGAACACCGACGTCCTGAGACTTAGTGTCACCAGGTCCCCTTaGAGTTGGGAACACCGACGT +
Preference number: 4 (lower is better)
Translates to: RLSPGPLGVGNTDVLRLSVTRSP*SWEHRR
Trigger: ACGTCGGTGTTCCCAACTCCAAGGGGACCTGGTGAC...ACTAAGTCTCAGGACGTCGGTGTTCCCAACTCCAAGGGGACCTGGTGACAGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CCA 90 bp CGTCTGTCACCAGGTCCCCTTGGAGTTGGGAACACCGACGTCCTGAGACTTAGTTGCCCAATGGTACACTaGCTGCCCCGAGTGCTGATC +
Preference number: 4 (lower is better)
Translates to: RLSPGPLGVGNTDVLRLSCPMVH*LPRVLI
Trigger: GATCAGCACTCGGGGCAGCCAGTGTACCATTGGGCA...ACTAAGTCTCAGGACGTCGGTGTTCCCAACTCCAAGGGGACCTGGTGACAGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555019.6
ENST00000612647.3
CDS-3UTR CCA 90 bp CCAGGTCCCCTTGGAGTTGGGAACACCGACGTCCTGAGACTTAGTAAGAAGAGTGGGCAGGTTGGCGGTTaGTACATGCAGACGCGGTGG +
Preference number: 4 (lower is better)
Translates to: PGPLGVGNTDVLRLSKKSGQVGG*YMQTRW
Trigger: CCACCGCGTCTGCATGTACCAACCGCCAACCTGCCC...ACTCTTCTTACTAAGTCTCAGGACGTCGGTGTTCCCAACTCCAAGGGGACCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555019.6
ENST00000612647.3
CDS-3UTR TCA 90 bp CGTCTGTCACCAGGTCCCCTTGGAGTTGGGAACACCGACGTCCTGAGACTTAGTCAGGGAGAGACTGACTaGCAGACACAGGGCTCTGAA +
Preference number: 4 (lower is better)
Translates to: RLSPGPLGVGNTDVLRLSQGETD*QTQGSE
Trigger: TTCAGAGCCCTGTGTCTGTCAGTCAGTCTCTCCCTG...ACTAAGTCTCAGGACGTCGGTGTTCCCAACTCCAAGGGGACCTGGTGACAGACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315988.8
ENST00000629617.2
CDS-3UTR TCA 90 bp CAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGATCACCAGGATCTGCATaGCCTCCAGGTCATTGCGAG +
Preference number: 4 (lower is better)
Translates to: QAPPTPYLGPRLHLSLWRSPGSA*PPGHCE
Trigger: CTCGCAATGACCTGGAGGTCATGCAGATCCTGGTGA...TCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR TCA 90 bp CGTCTGTCACCAGGTCCCCTTGGAGTTGGGAACACCGACGTCCTGAGACTTAGTCGTACACGTTGTTGTTaGCCACCGCGAAGTACAGCG +
Preference number: 4 (lower is better)
Translates to: RLSPGPLGVGNTDVLRLSRTRCC*PPRSTA
Trigger: CGCTGTACTTCGCGGTGGTCAACAACAACGTGTACG...ACTAAGTCTCAGGACGTCGGTGTTCCCAACTCCAAGGGGACCTGGTGACAGACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR TCA 90 bp AACACCGACGTCCTGAGACTTAGTAAGAAGAGTCTGAGGGGCTACTCCTCTCTCGTTGCCGTAGAGGCATaGGAAGCAGGGCTCGCCGTC +
Preference number: 4 (lower is better)
Translates to: NTDVLRLSKKSLRGYSSLVAVEA*EAGLAV
Trigger: GACGGCGAGCCCTGCTTCTCATGCCTCTACGGCAAC...GAGAGAGGAGTAGCCCCTCAGACTCTTCTTACTAAGTCTCAGGACGTCGGTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR TCA 90 bp TTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGAAAGCTCTGAAGTCAAGTGGTCCAGGAGGACATCGATaGTGGGCCCCGCCCAGCGGC +
Preference number: 4 (lower is better)
Translates to: LGHVFILVFGEKALKSSGPGGHR*WAPPSG
Trigger: GCCGCTGGGCGGGGCCCATCATCGATGTCCTCCTGG...ACCACTTGACTTCAGAGCTTTCTCTCCAAAGACTAAGATGAAGACGTGGCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR TCA 90 bp CCAGGTCCCCTTGGAGTTGGGAACACCGACGTCCTGAGACTTAGTAAGAAGAGTGGCCCTGAGACCCAGTaGGATCCTGGTAGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: PGPLGVGNTDVLRLSKKSGPETQ*DPGSCP
Trigger: TGGACAGCTACCAGGATCTCACTGGGTCTCAGGGCC...ACTCTTCTTACTAAGTCTCAGGACGTCGGTGTTCCCAACTCCAAGGGGACCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR TCA 90 bp CAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGATTTGGGGCCACCGCATaGCCAACGTTGACAAGCCAA +
Preference number: 4 (lower is better)
Translates to: QAPPTPYLGPRLHLSLWRFGATA*PTLTSQ
Trigger: TTGGCTTGTCAACGTTGGTCATGCGGTGGCCCCAAA...TCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000612647.3
CDS-3UTR GCA 90 bp CCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGAAAGCTCTGAAGCACCTGGCCATAGTATaGGGCCTCGTGCAGCGGCAG +
Preference number: 4 (lower is better)
Translates to: PPTLGHVFILVFGEKALKHLAIV*GLVQRQ
Trigger: CTGCCGCTGCACGAGGCCGCATACTATGGCCAGGTG...CTTCAGAGCTTTCTCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR GCA 90 bp CCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGAAAGCTCTGAAGCCTGGGTACGCTCGCTaGAGGACTTTCAGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: PPTLGHVFILVFGEKALKPGYAR*RTFRQP
Trigger: GGGCTGCCTGAAAGTCCTGCAGCGAGCGTACCCAGG...CTTCAGAGCTTTCTCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR GCA 90 bp AACACCGACGTCCTGAGACTTAGTAAGAAGAGTCTGAGGGGCTACTCCTCTCTCCCTGGGTACGCTCGCTaGAGGACTTTCAGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: NTDVLRLSKKSLRGYSSLPGYAR*RTFRQP
Trigger: GGGCTGCCTGAAAGTCCTGCAGCGAGCGTACCCAGG...GAGAGAGGAGTAGCCCCTCAGACTCTTCTTACTAAGTCTCAGGACGTCGGTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR GCA 90 bp CCAGGTCCCCTTGGAGTTGGGAACACCGACGTCCTGAGACTTAGTAAGAAGAGTTTTCCTCCTGCAGGGTaGGCTGGTCGATGGTCCCTG +
Preference number: 4 (lower is better)
Translates to: PGPLGVGNTDVLRLSKKSFPPAG*AGRWSL
Trigger: CAGGGACCATCGACCAGCGCACCCTGCAGGAGGAAA...ACTCTTCTTACTAAGTCTCAGGACGTCGGTGTTCCCAACTCCAAGGGGACCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR GCA 90 bp CCAGGTCCCCTTGGAGTTGGGAACACCGACGTCCTGAGACTTAGTAAGAAGAGTCGGCCTCCGCGTTCTTaGGCTCGCAGGCTTTGTAGA +
Preference number: 4 (lower is better)
Translates to: PGPLGVGNTDVLRLSKKSRPPRS*ARRLCR
Trigger: TCTACAAAGCCTGCGAGCGCAAGAACGCGGAGGCCG...ACTCTTCTTACTAAGTCTCAGGACGTCGGTGTTCCCAACTCCAAGGGGACCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR GCA 90 bp CGTCTGTCACCAGGTCCCCTTGGAGTTGGGAACACCGACGTCCTGAGACTTAGTCCGCTCACCAGGATCTaGATGACCTCCAGGTCATTG +
Preference number: 4 (lower is better)
Translates to: RLSPGPLGVGNTDVLRLSPLTRI*MTSRSL
Trigger: CAATGACCTGGAGGTCATGCAGATCCTGGTGAGCGG...ACTAAGTCTCAGGACGTCGGTGTTCCCAACTCCAAGGGGACCTGGTGACAGACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR GCA 90 bp CGTCTGTCACCAGGTCCCCTTGGAGTTGGGAACACCGACGTCCTGAGACTTAGTTCCACCACCTCCTCATaGTCATTCTTGCAGGCCTCG +
Preference number: 4 (lower is better)
Translates to: RLSPGPLGVGNTDVLRLSSTTSS*SFLQAS
Trigger: CGAGGCCTGCAAGAATGAGCATGAGGAGGTGGTGGA...ACTAAGTCTCAGGACGTCGGTGTTCCCAACTCCAAGGGGACCTGGTGACAGACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR GCA 90 bp CCCAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGCACGATCCTGTAGTTaGCCTTCTTGGAGGCGATGT +
Preference number: 4 (lower is better)
Translates to: PRLPLPPTLGHVFILVFGARSCS*PSWRRC
Trigger: ACATCGCCTCCAAGAAGGGCAACTACAGGATCGTGC...TCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR GCA 90 bp AGGTTTCTGCCATTCCTGAAGGTAGAGAAGGTCTGGGATCTGCTCATCAGTTTGGCACCTCGTCGTGGTTaGGCTCGGCCGCCAGGTGCA +
Preference number: 4 (lower is better)
Translates to: RFLPFLKVEKVWDLLISLAPRRG*ARPPGA
Trigger: TGCACCTGGCGGCCGAGCGCAACCACGACGAGGTGC...CAAACTGATGAGCAGATCCCAGACCTTCTCTACCTTCAGGAATGGCAGAAACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR GCA 90 bp CCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGAAAGCTCTGAAGAGTACAGCGCGGAGCTaGGCCGGTCTTCGTAGAGGC +
Preference number: 4 (lower is better)
Translates to: PPTLGHVFILVFGEKALKSTARS*AGLRRG
Trigger: GCCTCTACGAAGACCGGCGCAGCTCCGCGCTGTACT...CTTCAGAGCTTTCTCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR GCA 90 bp TTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGAAAGCTCTGAAGTCAAGTGGTGGGTCGGCGCCGTGTTaGAGCAGCAGCTCGGTGGCG +
Preference number: 4 (lower is better)
Translates to: LGHVFILVFGEKALKSSGGSAPC*SSSSVA
Trigger: CGCCACCGAGCTGCTGCTGCAACACGGCGCCGACCC...ACCACTTGACTTCAGAGCTTTCTCTCCAAAGACTAAGATGAAGACGTGGCCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR GCA 90 bp CGTCTGTCACCAGGTCCCCTTGGAGTTGGGAACACCGACGTCCTGAGACTTAGTACGAACTCACAGAACTaGACCACGCTGGGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: RLSPGPLGVGNTDVLRLSTNSQN*TTLGSL
Trigger: CAAGGAGCCCAGCGTGGTGCAGTTCTGTGAGTTCGT...ACTAAGTCTCAGGACGTCGGTGTTCCCAACTCCAAGGGGACCTGGTGACAGACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CCA 90 bp CCCAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAAGATCCCTGCGGGGCTaGATGAGAGATTCATGGCAA +
Preference number: 4 (lower is better)
Translates to: PRLPLPPTLGHVFILVFGRSLRG*MRDSWQ
Trigger: TTGCCATGAATCTCTCATCCAGCCCCGCAGGGATCT...TCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000315988.8
ENST00000629617.2
CDS-3UTR CCA 90 bp AACACCGACGTCCTGAGACTTAGTAAGAAGAGTCTGAGGGGCTACTCCTCTCTCTTGGAACAAGCCCATTaGGGCCCGGGCCGGCGAACT +
Preference number: 4 (lower is better)
Translates to: NTDVLRLSKKSLRGYSSLLEQAH*GPGRRT
Trigger: AGTTCGCCGGCCCGGGCCCCAATGGGCTTGTTCCAA...GAGAGAGGAGTAGCCCCTCAGACTCTTCTTACTAAGTCTCAGGACGTCGGTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CCA 90 bp CGTCTGTCACCAGGTCCCCTTGGAGTTGGGAACACCGACGTCCTGAGACTTAGTTTCTGCATGACCCCTTaGAACAAGCCCATTGGGGCC +
Preference number: 4 (lower is better)
Translates to: RLSPGPLGVGNTDVLRLSFCMTP*NKPIGA
Trigger: GGCCCCAATGGGCTTGTTCCAAGGGGTCATGCAGAA...ACTAAGTCTCAGGACGTCGGTGTTCCCAACTCCAAGGGGACCTGGTGACAGACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CCA 90 bp CCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGAAAGCTCTGAAGCTGGTCGATGGTCCCTaGGTACGCTCGCTGCAGGAC +
Preference number: 4 (lower is better)
Translates to: PPTLGHVFILVFGEKALKLVDGP*VRSLQD
Trigger: GTCCTGCAGCGAGCGTACCCAGGGACCATCGACCAG...CTTCAGAGCTTTCTCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CCA 90 bp AACACCGACGTCCTGAGACTTAGTAAGAAGAGTCTGAGGGGCTACTCCTCTCTCCTGGTCGATGGTCCCTaGGTACGCTCGCTGCAGGAC +
Preference number: 4 (lower is better)
Translates to: NTDVLRLSKKSLRGYSSLLVDGP*VRSLQD
Trigger: GTCCTGCAGCGAGCGTACCCAGGGACCATCGACCAG...GAGAGAGGAGTAGCCCCTCAGACTCTTCTTACTAAGTCTCAGGACGTCGGTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CCA 90 bp CCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGAAAGCTCTGAAGTCCTGCAGGGTGCGCTaGTCGATGGTCCCTGGGTAC +
Preference number: 4 (lower is better)
Translates to: PPTLGHVFILVFGEKALKSCRVR*SMVPGY
Trigger: GTACCCAGGGACCATCGACCAGCGCACCCTGCAGGA...CTTCAGAGCTTTCTCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CCA 90 bp CCAGGTCCCCTTGGAGTTGGGAACACCGACGTCCTGAGACTTAGTAAGAAGAGTAGGAGACAGTCCAGGTaGCCCCTGCACGTTGCCAAG +
Preference number: 4 (lower is better)
Translates to: PGPLGVGNTDVLRLSKKSRRQSR*PLHVAK
Trigger: CTTGGCAACGTGCAGGGGCCACCTGGACTGTCTCCT...ACTCTTCTTACTAAGTCTCAGGACGTCGGTGTTCCCAACTCCAAGGGGACCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CCA 90 bp CCAGGTCCCCTTGGAGTTGGGAACACCGACGTCCTGAGACTTAGTAAGAAGAGTCCGCGGTTGCAGCGGTaGTTGGTGTCTGCATTGTGC +
Preference number: 4 (lower is better)
Translates to: PGPLGVGNTDVLRLSKKSPRLQR*LVSALC
Trigger: GCACAATGCAGACACCAACCACCGCTGCAACCGCGG...ACTCTTCTTACTAAGTCTCAGGACGTCGGTGTTCCCAACTCCAAGGGGACCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CCA 90 bp CGTCTGTCACCAGGTCCCCTTGGAGTTGGGAACACCGACGTCCTGAGACTTAGTTCTTGGATTCCACCTTaGCTCCTCCGCTCACCAGGA +
Preference number: 4 (lower is better)
Translates to: RLSPGPLGVGNTDVLRLSSWIPP*LLRSPG
Trigger: TCCTGGTGAGCGGAGGAGCCAAGGTGGAATCCAAGA...ACTAAGTCTCAGGACGTCGGTGTTCCCAACTCCAAGGGGACCTGGTGACAGACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CCA 90 bp CAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGATGCCGTAGGCGTTCTTaGATTCCACCTTGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: QAPPTPYLGPRLHLSLWRCRRRS*IPPWLL
Trigger: GAGGAGCCAAGGTGGAATCCAAGAACGCCTACGGCA...TCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CCA 90 bp CCCAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGTGAGCCAGAGGTCTTaGAGGTTCTGCCTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: PRLPLPPTLGHVFILVFGVSQRS*RFCLLL
Trigger: AAGGAGAAGGCAGAACCTCCAAGACCTCTGGCTCAC...TCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CCA 90 bp CCCAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGACGTGGCCCCAGTTACTaGGTGTTCTCGTATTTCAGG +
Preference number: 4 (lower is better)
Translates to: PRLPLPPTLGHVFILVFGRGPSY*VFSYFR
Trigger: CCTGAAATACGAGAACACCCAGTAACTGGGGCCACG...TCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CCA 90 bp CGTCTGTCACCAGGTCCCCTTGGAGTTGGGAACACCGACGTCCTGAGACTTAGTGAGGTGCAGTGGACCTaGTCCATGGGTAGAAATGGG +
Preference number: 4 (lower is better)
Translates to: RLSPGPLGVGNTDVLRLSEVQWT*SMGRNG
Trigger: CCCATTTCTACCCATGGACCAGGTCCACTGCACCTC...ACTAAGTCTCAGGACGTCGGTGTTCCCAACTCCAAGGGGACCTGGTGACAGACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555019.6
ENST00000612647.3
CDS-3UTR TCA 90 bp CCCAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGATGCTGTATTTCTGCATaGCCCCTTGGAACAAGCCCA +
Preference number: 4 (lower is better)
Translates to: PRLPLPPTLGHVFILVFGCCISA*PLGTSP
Trigger: TGGGCTTGTTCCAAGGGGTCATGCAGAAATACAGCA...TCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR TCA 90 bp CAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGACCAGCTGGGAGGTCTTaGACAAGCTGCTGCTGTATT +
Preference number: 4 (lower is better)
Translates to: QAPPTPYLGPRLHLSLWRPAGRS*TSCCCI
Trigger: AATACAGCAGCAGCTTGTTCAAGACCTCCCAGCTGG...TCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR TCA 90 bp CCCAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGACTTCATCGCCATCCTTaGTGGCCTTTATCAAGGGGT +
Preference number: 4 (lower is better)
Translates to: PRLPLPPTLGHVFILVFGLHRHP*WPLSRG
Trigger: ACCCCTTGATAAAGGCCATCAAGGATGGCGATGAAG...TCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR TCA 90 bp AACACCGACGTCCTGAGACTTAGTAAGAAGAGTCTGAGGGGCTACTCCTCTCTCCCACGAACAAGGGGGTaGTGCCGTAGGCGTTCTTGG +
Preference number: 4 (lower is better)
Translates to: NTDVLRLSKKSLRGYSSLPRTRG*CRRRSW
Trigger: CCAAGAACGCCTACGGCATCACCCCCTTGTTCGTGG...GAGAGAGGAGTAGCCCCTCAGACTCTTCTTACTAAGTCTCAGGACGTCGGTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR TCA 90 bp TTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGAAAGCTCTGAAGTCAAGTGGTCCAGGTGCAGCGGACTaGCGCCGCTACGGCGTATGC +
Preference number: 4 (lower is better)
Translates to: LGHVFILVFGEKALKSSGPGAAD*RRYGVC
Trigger: GCATACGCCGTAGCGGCGTCAGTCCGCTGCACCTGG...ACCACTTGACTTCAGAGCTTTCTCTCCAAAGACTAAGATGAAGACGTGGCCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR TCA 90 bp AACACCGACGTCCTGAGACTTAGTAAGAAGAGTCTGAGGGGCTACTCCTCTCTCACTTCATGGCGAACATaGTGGTGGCGGGGAAGGCGG +
Preference number: 4 (lower is better)
Translates to: NTDVLRLSKKSLRGYSSLTSWRT*WWRGRR
Trigger: CCGCCTTCCCCGCCACCATCATGTTCGCCATGAAGT...GAGAGAGGAGTAGCCCCTCAGACTCTTCTTACTAAGTCTCAGGACGTCGGTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR TCA 90 bp TTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGAAAGCTCTGAAGTCAAGTGGTGGCTGCCCCGAGTGCTaGTCTGCGTGGCCATCCTCC +
Preference number: 4 (lower is better)
Translates to: LGHVFILVFGEKALKSSGGCPEC*SAWPSS
Trigger: GGAGGATGGCCACGCAGATCAGCACTCGGGGCAGCC...ACCACTTGACTTCAGAGCTTTCTCTCCAAAGACTAAGATGAAGACGTGGCCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555019.6
ENST00000612647.3
CDS-3UTR GCA 90 bp AACACCGACGTCCTGAGACTTAGTAAGAAGAGTCTGAGGGGCTACTCCTCTCTCGCCGGGTCCTCTGTGTaGTGGACACAGCTGCTGTGT +
Preference number: 4 (lower is better)
Translates to: NTDVLRLSKKSLRGYSSLAGSSV*WTQLLC
Trigger: ACACAGCAGCTGTGTCCAGCACACAGAGGACCCGGC...GAGAGAGGAGTAGCCCCTCAGACTCTTCTTACTAAGTCTCAGGACGTCGGTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315988.8
ENST00000629617.2
CDS-3UTR GCA 90 bp AACACCGACGTCCTGAGACTTAGTAAGAAGAGTCTGAGGGGCTACTCCTCTCTCTTTCCTCCTGCAGGGTaGGCTGGTCGATGGTCCCTG +
Preference number: 4 (lower is better)
Translates to: NTDVLRLSKKSLRGYSSLFPPAG*AGRWSL
Trigger: CAGGGACCATCGACCAGCGCACCCTGCAGGAGGAAA...GAGAGAGGAGTAGCCCCTCAGACTCTTCTTACTAAGTCTCAGGACGTCGGTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR GCA 90 bp CCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGAAAGCTCTGAAGACGGCTGTTTCCTCCTaGAGGGTGCGCTGGTCGATG +
Preference number: 4 (lower is better)
Translates to: PPTLGHVFILVFGEKALKTAVSS*RVRWSM
Trigger: CATCGACCAGCGCACCCTGCAGGAGGAAACAGCCGT...CTTCAGAGCTTTCTCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR GCA 90 bp CCAGGTCCCCTTGGAGTTGGGAACACCGACGTCCTGAGACTTAGTAAGAAGAGTAGTCCAGGTGGCCCCTaGACGTTGCCAAGTAAACGG +
Preference number: 4 (lower is better)
Translates to: PGPLGVGNTDVLRLSKKSSPGGP*TLPSKR
Trigger: CCGTTTACTTGGCAACGTGCAGGGGCCACCTGGACT...ACTCTTCTTACTAAGTCTCAGGACGTCGGTGTTCCCAACTCCAAGGGGACCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR GCA 90 bp CGTCTGTCACCAGGTCCCCTTGGAGTTGGGAACACCGACGTCCTGAGACTTAGTGCGGTGGTTGGTGTCTaGATTGTGCTGCACCAGAAT +
Preference number: 4 (lower is better)
Translates to: RLSPGPLGVGNTDVLRLSAVVGV*IVLHQN
Trigger: ATTCTGGTGCAGCACAATGCAGACACCAACCACCGC...ACTAAGTCTCAGGACGTCGGTGTTCCCAACTCCAAGGGGACCTGGTGACAGACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR GCA 90 bp CCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGAAAGCTCTGAAGGCGTTGTCGCTGGCCTaGGTGTTGATGTCAGCACCG +
Preference number: 4 (lower is better)
Translates to: PPTLGHVFILVFGEKALKALSLA*VLMSAP
Trigger: CGGTGCTGACATCAACACGCAGGCCAGCGACAACGC...CTTCAGAGCTTTCTCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR GCA 90 bp AACACCGACGTCCTGAGACTTAGTAAGAAGAGTCTGAGGGGCTACTCCTCTCTCGCGTTGTCGCTGGCCTaGGTGTTGATGTCAGCACCG +
Preference number: 4 (lower is better)
Translates to: NTDVLRLSKKSLRGYSSLALSLA*VLMSAP
Trigger: CGGTGCTGACATCAACACGCAGGCCAGCGACAACGC...GAGAGAGGAGTAGCCCCTCAGACTCTTCTTACTAAGTCTCAGGACGTCGGTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR GCA 90 bp AGGTTTCTGCCATTCCTGAAGGTAGAGAAGGTCTGGGATCTGCTCATCAGTTTGTACGGCGTATGCGCGTaGGGCTGGTCACCGGCAGCA +
Preference number: 4 (lower is better)
Translates to: RFLPFLKVEKVWDLLISLYGVCA*GWSPAA
Trigger: TGCTGCCGGTGACCAGCCGCACGCGCATACGCCGTA...CAAACTGATGAGCAGATCCCAGACCTTCTCTACCTTCAGGAATGGCAGAAACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR GCA 90 bp CCCAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAACACATTCTGTTCTCTaGTCTGGCCAAAGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: PRLPLPPTLGHVFILVFGTHSVL*SGQSSG
Trigger: CCCAGAGCTTTGGCCAGAGCAGAGAACAGAATGTGT...TCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR GCA 90 bp CCAGGTCCCCTTGGAGTTGGGAACACCGACGTCCTGAGACTTAGTAAGAAGAGTCGAACTCTCAGGAGGTaGAGTGGACCTGGTCCATGG +
Preference number: 4 (lower is better)
Translates to: PGPLGVGNTDVLRLSKKSRTLRR*SGPGPW
Trigger: CCATGGACCAGGTCCACTGCACCTCCTGAGAGTTCG...ACTCTTCTTACTAAGTCTCAGGACGTCGGTGTTCCCAACTCCAAGGGGACCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555019.6
ENST00000612647.3
CDS-3UTR CCA 90 bp CAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGAAGATCCCTGCGGGGCTaGATGAGAGATTCATGGCAA +
Preference number: 4 (lower is better)
Translates to: QAPPTPYLGPRLHLSLWRRSLRG*MRDSWQ
Trigger: TTGCCATGAATCTCTCATCCAGCCCCGCAGGGATCT...TCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000315988.8
ENST00000629617.2
CDS-3UTR CCA 90 bp AACACCGACGTCCTGAGACTTAGTAAGAAGAGTCTGAGGGGCTACTCCTCTCTCTCCGCAGGCGCCAGCTaGGAGGTCTTGAACAAGCTG +
Preference number: 4 (lower is better)
Translates to: NTDVLRLSKKSLRGYSSLSAGAS*EVLNKL
Trigger: CAGCTTGTTCAAGACCTCCCAGCTGGCGCCTGCGGA...GAGAGAGGAGTAGCCCCTCAGACTCTTCTTACTAAGTCTCAGGACGTCGGTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CCA 90 bp AGGTTTCTGCCATTCCTGAAGGTAGAGAAGGTCTGGGATCTGCTCATCAGTTTGGGGTGCGCTGGTCGATaGTCCCTGGGTACGCTCGCT +
Preference number: 4 (lower is better)
Translates to: RFLPFLKVEKVWDLLISLGCAGR*SLGTLA
Trigger: AGCGAGCGTACCCAGGGACCATCGACCAGCGCACCC...CAAACTGATGAGCAGATCCCAGACCTTCTCTACCTTCAGGAATGGCAGAAACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CCA 90 bp CCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGAAAGCTCTGAAGTCCAACTGTCCACTCTaGGCGGCCACGAACAAGGGG +
Preference number: 4 (lower is better)
Translates to: PPTLGHVFILVFGEKALKSNCPL*AATNKG
Trigger: CCCCTTGTTCGTGGCCGCCCAGAGTGGACAGTTGGA...CTTCAGAGCTTTCTCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CCA 90 bp CCAGGTCCCCTTGGAGTTGGGAACACCGACGTCCTGAGACTTAGTAAGAAGAGTGCAAGCCGTCCTTGTTaGTCTTGTTGGCGTCGGCAC +
Preference number: 4 (lower is better)
Translates to: PGPLGVGNTDVLRLSKKSASRPC*SCWRRH
Trigger: GTGCCGACGCCAACAAGACCAACAAGGACGGCTTGC...ACTCTTCTTACTAAGTCTCAGGACGTCGGTGTTCCCAACTCCAAGGGGACCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CCA 90 bp CCAGGTCCCCTTGGAGTTGGGAACACCGACGTCCTGAGACTTAGTAAGAAGAGTTCGATGTTCGCGCCGTaGTCCAGCAGCAGCTGCATT +
Preference number: 4 (lower is better)
Translates to: PGPLGVGNTDVLRLSKKSSMFAP*SSSSCI
Trigger: AATGCAGCTGCTGCTGGACCACGGCGCGAACATCGA...ACTCTTCTTACTAAGTCTCAGGACGTCGGTGTTCCCAACTCCAAGGGGACCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CCA 90 bp AACACCGACGTCCTGAGACTTAGTAAGAAGAGTCTGAGGGGCTACTCCTCTCTCAGGCGGTGGGGTGCGTaGCGATATAGGCGTCGATGT +
Preference number: 4 (lower is better)
Translates to: NTDVLRLSKKSLRGYSSLRRWGA*RYRRRC
Trigger: ACATCGACGCCTATATCGCCACGCACCCCACCGCCT...GAGAGAGGAGTAGCCCCTCAGACTCTTCTTACTAAGTCTCAGGACGTCGGTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CCA 90 bp AGGTTTCTGCCATTCCTGAAGGTAGAGAAGGTCTGGGATCTGCTCATCAGTTTGTGGCGGGGAAGGCGGTaGGGTGCGTGGCGATATAGG +
Preference number: 4 (lower is better)
Translates to: RFLPFLKVEKVWDLLISLWRGRR*GAWRYR
Trigger: CCTATATCGCCACGCACCCCACCGCCTTCCCCGCCA...CAAACTGATGAGCAGATCCCAGACCTTCTCTACCTTCAGGAATGGCAGAAACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CCA 90 bp AGGTTTCTGCCATTCCTGAAGGTAGAGAAGGTCTGGGATCTGCTCATCAGTTTGAGAACTGCACCACGCTaGGCTCCTTGTCGGCCGCGG +
Preference number: 4 (lower is better)
Translates to: RFLPFLKVEKVWDLLISLRTAPR*APCRPR
Trigger: CCGCGGCCGACAAGGAGCCCAGCGTGGTGCAGTTCT...CAAACTGATGAGCAGATCCCAGACCTTCTCTACCTTCAGGAATGGCAGAAACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CCA 90 bp CCCAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGATACGGTATTTCCCAATaGCCTTTCGAACCCGCAGTC +
Preference number: 4 (lower is better)
Translates to: PRLPLPPTLGHVFILVFGYGISQ*PFEPAV
Trigger: GACTGCGGGTTCGAAAGGCCATTGGGAAATACCGTA...TCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CCA 90 bp CAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGACGTGGCCCCAGTTACTaGGTGTTCTCGTATTTCAGG +
Preference number: 4 (lower is better)
Translates to: QAPPTPYLGPRLHLSLWRRGPSY*VFSYFR
Trigger: CCTGAAATACGAGAACACCCAGTAACTGGGGCCACG...TCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CCA 90 bp CCAGGTCCCCTTGGAGTTGGGAACACCGACGTCCTGAGACTTAGTAAGAAGAGTAGGTCCCCTTGGAGTTaGGAACACCGACGTCCTGAG +
Preference number: 4 (lower is better)
Translates to: PGPLGVGNTDVLRLSKKSRSPWS*EHRRPE
Trigger: CTCAGGACGTCGGTGTTCCCAACTCCAAGGGGACCT...ACTCTTCTTACTAAGTCTCAGGACGTCGGTGTTCCCAACTCCAAGGGGACCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CCA 90 bp CCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGAAAGCTCTGAAGACTCCTCCTGCCCAATaGTACACTGGCTGCCCCGAG +
Preference number: 4 (lower is better)
Translates to: PPTLGHVFILVFGEKALKTPPAQ*YTGCPE
Trigger: CTCGGGGCAGCCAGTGTACCATTGGGCAGGAGGAGT...CTTCAGAGCTTTCTCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000555019.6
ENST00000612647.3
CDS-3UTR CCA 90 bp AACACCGACGTCCTGAGACTTAGTAAGAAGAGTCTGAGGGGCTACTCCTCTCTCCGGTGGCCTCAGCAGTaGTTGGGCCCCTTGTCTTGT +
Preference number: 4 (lower is better)
Translates to: NTDVLRLSKKSLRGYSSLRWPQQ*LGPLSC
Trigger: ACAAGACAAGGGGCCCAACCACTGCTGAGGCCACCG...GAGAGAGGAGTAGCCCCTCAGACTCTTCTTACTAAGTCTCAGGACGTCGGTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555019.6
ENST00000612647.3
CDS-3UTR CCA 90 bp AACACCGACGTCCTGAGACTTAGTAAGAAGAGTCTGAGGGGCTACTCCTCTCTCTACATGCAGACGCGGTaGCCTCAGCAGTGGTTGGGC +
Preference number: 4 (lower is better)
Translates to: NTDVLRLSKKSLRGYSSLYMQTR*PQQWLG
Trigger: GCCCAACCACTGCTGAGGCCACCGCGTCTGCATGTA...GAGAGAGGAGTAGCCCCTCAGACTCTTCTTACTAAGTCTCAGGACGTCGGTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555019.6
ENST00000612647.3
CDS-3UTR CCA 90 bp CGTCTGTCACCAGGTCCCCTTGGAGTTGGGAACACCGACGTCCTGAGACTTAGTGCAGGGAGTTTATTTTaGGGCCACCGCATGACCAAC +
Preference number: 4 (lower is better)
Translates to: RLSPGPLGVGNTDVLRLSAGSLF*GHRMTN
Trigger: GTTGGTCATGCGGTGGCCCCAAAATAAACTCCCTGC...ACTAAGTCTCAGGACGTCGGTGTTCCCAACTCCAAGGGGACCTGGTGACAGACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612647.3
CDS-3UTR TCA 90 bp AGGTTTCTGCCATTCCTGAAGGTAGAGAAGGTCTGGGATCTGCTCATCAGTTTGCGGCAGGTCCCAGGATaGAAGGGGCTCAGGCTCACT +
Preference number: 4 (lower is better)
Translates to: RFLPFLKVEKVWDLLISLRQVPG*KGLRLT
Trigger: AGTGAGCCTGAGCCCCTTTCATCCTGGGACCTGCCG...CAAACTGATGAGCAGATCCCAGACCTTCTCTACCTTCAGGAATGGCAGAAACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315988.8
ENST00000629617.2
CDS-3UTR TCA 90 bp CGTCTGTCACCAGGTCCCCTTGGAGTTGGGAACACCGACGTCCTGAGACTTAGTTGCTGTATTTCTGCATaGCCCCTTGGAACAAGCCCA +
Preference number: 4 (lower is better)
Translates to: RLSPGPLGVGNTDVLRLSCCISA*PLGTSP
Trigger: TGGGCTTGTTCCAAGGGGTCATGCAGAAATACAGCA...ACTAAGTCTCAGGACGTCGGTGTTCCCAACTCCAAGGGGACCTGGTGACAGACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR TCA 90 bp CAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGACTTCATCGCCATCCTTaGTGGCCTTTATCAAGGGGT +
Preference number: 4 (lower is better)
Translates to: QAPPTPYLGPRLHLSLWRLHRHP*WPLSRG
Trigger: ACCCCTTGATAAAGGCCATCAAGGATGGCGATGAAG...TCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR TCA 90 bp CAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGGAACACCGACGTCCTaGGACTTAGTAAGAAGAGTC +
Preference number: 4 (lower is better)
Translates to: QAPPTPYLGPRLHLSLWRGTPTS*DLVRRV
Trigger: GACTCTTCTTACTAAGTCTCAGGACGTCGGTGTTCC...TCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR GCA 90 bp CCCAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGGGAAAAGTACTCTaGATAGGAGAAGCGGGTCAT +
Preference number: 4 (lower is better)
Translates to: PRLPLPPTLGHVFILVFGEGKVL*IGEAGH
Trigger: ATGACCCGCTTCTCCTATGCAGAGTACTTTTCCCTC...TCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000315988.8
ENST00000629617.2
CDS-3UTR GCA 90 bp CAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGACTCCTTGTTGGGCTCTaGGAGATTCTTCCCTTCCTT +
Preference number: 4 (lower is better)
Translates to: QAPPTPYLGPRLHLSLWRLLVGL*EILPFL
Trigger: AAGGAAGGGAAGAATCTCGCAGAGCCCAACAAGGAG...TCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR GCA 90 bp AGGTTTCTGCCATTCCTGAAGGTAGAGAAGGTCTGGGATCTGCTCATCAGTTTGCCTGGGTACGCTCGCTaGAGGACTTTCAGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: RFLPFLKVEKVWDLLISLPGYAR*RTFRQP
Trigger: GGGCTGCCTGAAAGTCCTGCAGCGAGCGTACCCAGG...CAAACTGATGAGCAGATCCCAGACCTTCTCTACCTTCAGGAATGGCAGAAACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR GCA 90 bp CCAGGTCCCCTTGGAGTTGGGAACACCGACGTCCTGAGACTTAGTAAGAAGAGTGTGGCCCCTGCACGTTaGCAAGTAAACGGCTGTTTC +
Preference number: 4 (lower is better)
Translates to: PGPLGVGNTDVLRLSKKSVAPAR*QVNGCF
Trigger: GAAACAGCCGTTTACTTGGCAACGTGCAGGGGCCAC...ACTCTTCTTACTAAGTCTCAGGACGTCGGTGTTCCCAACTCCAAGGGGACCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR GCA 90 bp AACACCGACGTCCTGAGACTTAGTAAGAAGAGTCTGAGGGGCTACTCCTCTCTCAGTCCAGGTGGCCCCTaGACGTTGCCAAGTAAACGG +
Preference number: 4 (lower is better)
Translates to: NTDVLRLSKKSLRGYSSLSPGGP*TLPSKR
Trigger: CCGTTTACTTGGCAACGTGCAGGGGCCACCTGGACT...GAGAGAGGAGTAGCCCCTCAGACTCTTCTTACTAAGTCTCAGGACGTCGGTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR GCA 90 bp CCCAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGATTGGTGTCTGCATTGTaGTGCACCAGAATCTTCACG +
Preference number: 4 (lower is better)
Translates to: PRLPLPPTLGHVFILVFGLVSAL*CTRIFT
Trigger: CGTGAAGATTCTGGTGCAGCACAATGCAGACACCAA...TCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR GCA 90 bp TTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGAAAGCTCTGAAGTCAAGTGGTCGGTCCAGCCGCGGTTaGAGCGGTGGTTGGTGTCTG +
Preference number: 4 (lower is better)
Translates to: LGHVFILVFGEKALKSSGRSSRG*SGGWCL
Trigger: CAGACACCAACCACCGCTGCAACCGCGGCTGGACCG...ACCACTTGACTTCAGAGCTTTCTCTCCAAAGACTAAGATGAAGACGTGGCCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR GCA 90 bp CCAGGTCCCCTTGGAGTTGGGAACACCGACGTCCTGAGACTTAGTAAGAAGAGTCCGCTCACCAGGATCTaGATGACCTCCAGGTCATTG +
Preference number: 4 (lower is better)
Translates to: PGPLGVGNTDVLRLSKKSPLTRI*MTSRSL
Trigger: CAATGACCTGGAGGTCATGCAGATCCTGGTGAGCGG...ACTCTTCTTACTAAGTCTCAGGACGTCGGTGTTCCCAACTCCAAGGGGACCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR GCA 90 bp CCAGGTCCCCTTGGAGTTGGGAACACCGACGTCCTGAGACTTAGTAAGAAGAGTCCTCATGCTCATTCTTaGAGGCCTCGTAGAGGGCAG +
Preference number: 4 (lower is better)
Translates to: PGPLGVGNTDVLRLSKKSPHAHS*RPRRGQ
Trigger: CTGCCCTCTACGAGGCCTGCAAGAATGAGCATGAGG...ACTCTTCTTACTAAGTCTCAGGACGTCGGTGTTCCCAACTCCAAGGGGACCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR GCA 90 bp AGGTTTCTGCCATTCCTGAAGGTAGAGAAGGTCTGGGATCTGCTCATCAGTTTGAGTACAGCGCGGAGCTaGGCCGGTCTTCGTAGAGGC +
Preference number: 4 (lower is better)
Translates to: RFLPFLKVEKVWDLLISLSTARS*AGLRRG
Trigger: GCCTCTACGAAGACCGGCGCAGCTCCGCGCTGTACT...CAAACTGATGAGCAGATCCCAGACCTTCTCTACCTTCAGGAATGGCAGAAACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR GCA 90 bp TTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGAAAGCTCTGAAGTCAAGTGGTGCAGCAGCTGCATTGTaGGCAGGCAGCCGTGGCGGA +
Preference number: 4 (lower is better)
Translates to: LGHVFILVFGEKALKSSGAAAAL*AGSRGG
Trigger: TCCGCCACGGCTGCCTGCGCACAATGCAGCTGCTGC...ACCACTTGACTTCAGAGCTTTCTCTCCAAAGACTAAGATGAAGACGTGGCCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR GCA 90 bp AGGTTTCTGCCATTCCTGAAGGTAGAGAAGGTCTGGGATCTGCTCATCAGTTTGTGGTCCAGCAGCAGCTaGATTGTGCGCAGGCAGCCG +
Preference number: 4 (lower is better)
Translates to: RFLPFLKVEKVWDLLISLWSSSS*IVRRQP
Trigger: CGGCTGCCTGCGCACAATGCAGCTGCTGCTGGACCA...CAAACTGATGAGCAGATCCCAGACCTTCTCTACCTTCAGGAATGGCAGAAACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CCA 90 bp CAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGATCTCCGGATTATTTTTaGCCCTTGGAGGAAGCCCTG +
Preference number: 4 (lower is better)
Translates to: QAPPTPYLGPRLHLSLWRSPDYF*PLEEAL
Trigger: CAGGGCTTCCTCCAAGGGCCAAAAATAATCCGGAGA...TCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000315988.8
ENST00000629617.2
CDS-3UTR CCA 90 bp CCAGGTCCCCTTGGAGTTGGGAACACCGACGTCCTGAGACTTAGTAAGAAGAGTAGGAGAAGCGGGTCATaGCTTCAGGCAGGAATGAGG +
Preference number: 4 (lower is better)
Translates to: PGPLGVGNTDVLRLSKKSRRSGS*LQAGMR
Trigger: CCTCATTCCTGCCTGAAGCCATGACCCGCTTCTCCT...ACTCTTCTTACTAAGTCTCAGGACGTCGGTGTTCCCAACTCCAAGGGGACCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315988.8
ENST00000629617.2
CDS-3UTR CCA 90 bp AGGTTTCTGCCATTCCTGAAGGTAGAGAAGGTCTGGGATCTGCTCATCAGTTTGTTGGAACAAGCCCATTaGGGCCCGGGCCGGCGAACT +
Preference number: 4 (lower is better)
Translates to: RFLPFLKVEKVWDLLISLLEQAH*GPGRRT
Trigger: AGTTCGCCGGCCCGGGCCCCAATGGGCTTGTTCCAA...CAAACTGATGAGCAGATCCCAGACCTTCTCTACCTTCAGGAATGGCAGAAACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CCA 90 bp CCAGGTCCCCTTGGAGTTGGGAACACCGACGTCCTGAGACTTAGTAAGAAGAGTTTCTGCATGACCCCTTaGAACAAGCCCATTGGGGCC +
Preference number: 4 (lower is better)
Translates to: PGPLGVGNTDVLRLSKKSFCMTP*NKPIGA
Trigger: GGCCCCAATGGGCTTGTTCCAAGGGGTCATGCAGAA...ACTCTTCTTACTAAGTCTCAGGACGTCGGTGTTCCCAACTCCAAGGGGACCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CCA 90 bp AGGTTTCTGCCATTCCTGAAGGTAGAGAAGGTCTGGGATCTGCTCATCAGTTTGTCCTGCAGGGTGCGCTaGTCGATGGTCCCTGGGTAC +
Preference number: 4 (lower is better)
Translates to: RFLPFLKVEKVWDLLISLSCRVR*SMVPGY
Trigger: GTACCCAGGGACCATCGACCAGCGCACCCTGCAGGA...CAAACTGATGAGCAGATCCCAGACCTTCTCTACCTTCAGGAATGGCAGAAACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CCA 90 bp CCAGGTCCCCTTGGAGTTGGGAACACCGACGTCCTGAGACTTAGTAAGAAGAGTTCTTGGATTCCACCTTaGCTCCTCCGCTCACCAGGA +
Preference number: 4 (lower is better)
Translates to: PGPLGVGNTDVLRLSKKSSWIPP*LLRSPG
Trigger: TCCTGGTGAGCGGAGGAGCCAAGGTGGAATCCAAGA...ACTCTTCTTACTAAGTCTCAGGACGTCGGTGTTCCCAACTCCAAGGGGACCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CCA 90 bp CCAGGTCCCCTTGGAGTTGGGAACACCGACGTCCTGAGACTTAGTAAGAAGAGTCCTTGTTGGTCTTGTTaGCGTCGGCACCCTGTGACA +
Preference number: 4 (lower is better)
Translates to: PGPLGVGNTDVLRLSKKSPCWSC*RRHPVT
Trigger: TGTCACAGGGTGCCGACGCCAACAAGACCAACAAGG...ACTCTTCTTACTAAGTCTCAGGACGTCGGTGTTCCCAACTCCAAGGGGACCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CCA 90 bp AACACCGACGTCCTGAGACTTAGTAAGAAGAGTCTGAGGGGCTACTCCTCTCTCGCAAGCCGTCCTTGTTaGTCTTGTTGGCGTCGGCAC +
Preference number: 4 (lower is better)
Translates to: NTDVLRLSKKSLRGYSSLASRPC*SCWRRH
Trigger: GTGCCGACGCCAACAAGACCAACAAGGACGGCTTGC...GAGAGAGGAGTAGCCCCTCAGACTCTTCTTACTAAGTCTCAGGACGTCGGTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CCA 90 bp CCAGGTCCCCTTGGAGTTGGGAACACCGACGTCCTGAGACTTAGTAAGAAGAGTTGTAGTTGCCCTTCTTaGAGGCGATGTGCAGCGGGA +
Preference number: 4 (lower is better)
Translates to: PGPLGVGNTDVLRLSKKSCSCPS*RRCAAG
Trigger: TCCCGCTGCACATCGCCTCCAAGAAGGGCAACTACA...ACTCTTCTTACTAAGTCTCAGGACGTCGGTGTTCCCAACTCCAAGGGGACCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CCA 90 bp AGGTTTCTGCCATTCCTGAAGGTAGAGAAGGTCTGGGATCTGCTCATCAGTTTGGTATGCGCGTGCGGCTaGTCACCGGCAGCAGCATCT +
Preference number: 4 (lower is better)
Translates to: RFLPFLKVEKVWDLLISLVCACG*SPAAAS
Trigger: AGATGCTGCTGCCGGTGACCAGCCGCACGCGCATAC...CAAACTGATGAGCAGATCCCAGACCTTCTCTACCTTCAGGAATGGCAGAAACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CCA 90 bp CCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGAAAGCTCTGAAGTCGATGTTCGCGCCGTaGTCCAGCAGCAGCTGCATT +
Preference number: 4 (lower is better)
Translates to: PPTLGHVFILVFGEKALKSMFAP*SSSSCI
Trigger: AATGCAGCTGCTGCTGGACCACGGCGCGAACATCGA...CTTCAGAGCTTTCTCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CCA 90 bp CCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGAAAGCTCTGAAGCCAGCGGCTCACCTCTaGGGCAGATACGAACTCACA +
Preference number: 4 (lower is better)
Translates to: PPTLGHVFILVFGEKALKPAAHL*GRYELT
Trigger: TGTGAGTTCGTATCTGCCCCAGAGGTGAGCCGCTGG...CTTCAGAGCTTTCTCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CCA 90 bp AACACCGACGTCCTGAGACTTAGTAAGAAGAGTCTGAGGGGCTACTCCTCTCTCACTCCTCTCTCCCCGTaGCCCCAGTTACTGGGTGTT +
Preference number: 4 (lower is better)
Translates to: NTDVLRLSKKSLRGYSSLTPLSP*PQLLGV
Trigger: AACACCCAGTAACTGGGGCCACGGGGAGAGAGGAGT...GAGAGAGGAGTAGCCCCTCAGACTCTTCTTACTAAGTCTCAGGACGTCGGTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CCA 90 bp AACACCGACGTCCTGAGACTTAGTAAGAAGAGTCTGAGGGGCTACTCCTCTCTCAGGTCCCCTTGGAGTTaGGAACACCGACGTCCTGAG +
Preference number: 4 (lower is better)
Translates to: NTDVLRLSKKSLRGYSSLRSPWS*EHRRPE
Trigger: CTCAGGACGTCGGTGTTCCCAACTCCAAGGGGACCT...GAGAGAGGAGTAGCCCCTCAGACTCTTCTTACTAAGTCTCAGGACGTCGGTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CCA 90 bp CCAGGTCCCCTTGGAGTTGGGAACACCGACGTCCTGAGACTTAGTAAGAAGAGTTCTCAGGAGGTGCAGTaGACCTGGTCCATGGGTAGA +
Preference number: 4 (lower is better)
Translates to: PGPLGVGNTDVLRLSKKSSQEVQ*TWSMGR
Trigger: TCTACCCATGGACCAGGTCCACTGCACCTCCTGAGA...ACTCTTCTTACTAAGTCTCAGGACGTCGGTGTTCCCAACTCCAAGGGGACCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555019.6
ENST00000612647.3
CDS-3UTR TCA 90 bp CCAGGTCCCCTTGGAGTTGGGAACACCGACGTCCTGAGACTTAGTAAGAAGAGTATAGGGGAGCAAAGCTaGGAAGCCAAGCTGTACCTG +
Preference number: 4 (lower is better)
Translates to: PGPLGVGNTDVLRLSKKSIGEQS*EAKLYL
Trigger: CAGGTACAGCTTGGCTTCTCAGCTTTGCTCCCCTAT...ACTCTTCTTACTAAGTCTCAGGACGTCGGTGTTCCCAACTCCAAGGGGACCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315988.8
ENST00000629617.2
CDS-3UTR TCA 90 bp CCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGAAAGCTCTGAAGTCACCAGGATCTGCATaGCCTCCAGGTCATTGCGAG +
Preference number: 4 (lower is better)
Translates to: PPTLGHVFILVFGEKALKSPGSA*PPGHCE
Trigger: CTCGCAATGACCTGGAGGTCATGCAGATCCTGGTGA...CTTCAGAGCTTTCTCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR TCA 90 bp CCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGAAAGCTCTGAAGCGTACACGTTGTTGTTaGCCACCGCGAAGTACAGCG +
Preference number: 4 (lower is better)
Translates to: PPTLGHVFILVFGEKALKRTRCC*PPRSTA
Trigger: CGCTGTACTTCGCGGTGGTCAACAACAACGTGTACG...CTTCAGAGCTTTCTCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR TCA 90 bp AGGTCTGGGATCTGCTCATCAGTTTGTAAACAAATGATTCTTCTCCTTGACACACCAGGAGGACATCGATaGTGGGCCCCGCCCAGCGGC +
Preference number: 4 (lower is better)
Translates to: RSGICSSVCKQMILLLDTPGGHR*WAPPSG
Trigger: GCCGCTGGGCGGGGCCCATCATCGATGTCCTCCTGG...TGTGTCAAGGAGAAGAATCATTTGTTTACAAACTGATGAGCAGATCCCAGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR TCA 90 bp CCCAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGATCTGAAGTCAAGTGGTaGGTTTTCCAGAACAAGTGG +
Preference number: 4 (lower is better)
Translates to: PRLPLPPTLGHVFILVFGSEVKW*VFQNKW
Trigger: CCACTTGTTCTGGAAAACTCACCACTTGACTTCAGA...TCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR TCA 90 bp AACACCGACGTCCTGAGACTTAGTAAGAAGAGTCTGAGGGGCTACTCCTCTCTCGTTTGGAGGTTGCACTaGGGAAGCTGCAATCCTGCC +
Preference number: 4 (lower is better)
Translates to: NTDVLRLSKKSLRGYSSLVWRLH*GSCNPA
Trigger: GGCAGGATTGCAGCTTCCTCAGTGCAACCTCCAAAC...GAGAGAGGAGTAGCCCCTCAGACTCTTCTTACTAAGTCTCAGGACGTCGGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612647.3
CDS-3UTR GCA 90 bp AGGTTTCTGCCATTCCTGAAGGTAGAGAAGGTCTGGGATCTGCTCATCAGTTTGGCCGGGTCCTCTGTGTaGTGGACACAGCTGCTGTGT +
Preference number: 4 (lower is better)
Translates to: RFLPFLKVEKVWDLLISLAGSSV*WTQLLC
Trigger: ACACAGCAGCTGTGTCCAGCACACAGAGGACCCGGC...CAAACTGATGAGCAGATCCCAGACCTTCTCTACCTTCAGGAATGGCAGAAACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315988.8
ENST00000629617.2
CDS-3UTR GCA 90 bp CAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGAGGGAAAAGTACTCTaGATAGGAGAAGCGGGTCAT +
Preference number: 4 (lower is better)
Translates to: QAPPTPYLGPRLHLSLWREGKVL*IGEAGH
Trigger: ATGACCCGCTTCTCCTATGCAGAGTACTTTTCCCTC...TCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000315988.8
ENST00000629617.2
CDS-3UTR GCA 90 bp AGGTTTCTGCCATTCCTGAAGGTAGAGAAGGTCTGGGATCTGCTCATCAGTTTGCGAACTCTCAGGAGGTaGAGTGGACCTGGAGGGTGC +
Preference number: 4 (lower is better)
Translates to: RFLPFLKVEKVWDLLISLRTLRR*SGPGGC
Trigger: GCACCCTCCAGGTCCACTGCACCTCCTGAGAGTTCG...CAAACTGATGAGCAGATCCCAGACCTTCTCTACCTTCAGGAATGGCAGAAACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315988.8
ENST00000629617.2
CDS-3UTR GCA 90 bp CCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGAAAGCTCTGAAGGTGGCCCCTGCACGTTaGCAAGTAAACGGCTGTTTC +
Preference number: 4 (lower is better)
Translates to: PPTLGHVFILVFGEKALKVAPAR*QVNGCF
Trigger: GAAACAGCCGTTTACTTGGCAACGTGCAGGGGCCAC...CTTCAGAGCTTTCTCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR GCA 90 bp AACACCGACGTCCTGAGACTTAGTAAGAAGAGTCTGAGGGGCTACTCCTCTCTCGTGGCCCCTGCACGTTaGCAAGTAAACGGCTGTTTC +
Preference number: 4 (lower is better)
Translates to: NTDVLRLSKKSLRGYSSLVAPAR*QVNGCF
Trigger: GAAACAGCCGTTTACTTGGCAACGTGCAGGGGCCAC...GAGAGAGGAGTAGCCCCTCAGACTCTTCTTACTAAGTCTCAGGACGTCGGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR GCA 90 bp CAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGATTGGTGTCTGCATTGTaGTGCACCAGAATCTTCACG +
Preference number: 4 (lower is better)
Translates to: QAPPTPYLGPRLHLSLWRLVSAL*CTRIFT
Trigger: CGTGAAGATTCTGGTGCAGCACAATGCAGACACCAA...TCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR GCA 90 bp CGTCTGTCACCAGGTCCCCTTGGAGTTGGGAACACCGACGTCCTGAGACTTAGTTTGGTGTCTGCATTGTaGTGCACCAGAATCTTCACG +
Preference number: 4 (lower is better)
Translates to: RLSPGPLGVGNTDVLRLSLVSAL*CTRIFT
Trigger: CGTGAAGATTCTGGTGCAGCACAATGCAGACACCAA...ACTAAGTCTCAGGACGTCGGTGTTCCCAACTCCAAGGGGACCTGGTGACAGACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR GCA 90 bp CCAGGTCCCCTTGGAGTTGGGAACACCGACGTCCTGAGACTTAGTAAGAAGAGTGCGGTGGTTGGTGTCTaGATTGTGCTGCACCAGAAT +
Preference number: 4 (lower is better)
Translates to: PGPLGVGNTDVLRLSKKSAVVGV*IVLHQN
Trigger: ATTCTGGTGCAGCACAATGCAGACACCAACCACCGC...ACTCTTCTTACTAAGTCTCAGGACGTCGGTGTTCCCAACTCCAAGGGGACCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR GCA 90 bp AACACCGACGTCCTGAGACTTAGTAAGAAGAGTCTGAGGGGCTACTCCTCTCTCCCGCTCACCAGGATCTaGATGACCTCCAGGTCATTG +
Preference number: 4 (lower is better)
Translates to: NTDVLRLSKKSLRGYSSLPLTRI*MTSRSL
Trigger: CAATGACCTGGAGGTCATGCAGATCCTGGTGAGCGG...GAGAGAGGAGTAGCCCCTCAGACTCTTCTTACTAAGTCTCAGGACGTCGGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR GCA 90 bp CCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGAAAGCTCTGAAGCCTCATGCTCATTCTTaGAGGCCTCGTAGAGGGCAG +
Preference number: 4 (lower is better)
Translates to: PPTLGHVFILVFGEKALKPHAHS*RPRRGQ
Trigger: CTGCCCTCTACGAGGCCTGCAAGAATGAGCATGAGG...CTTCAGAGCTTTCTCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR GCA 90 bp AGGTTTCTGCCATTCCTGAAGGTAGAGAAGGTCTGGGATCTGCTCATCAGTTTGTTCTTGGAGGCGATGTaGAGCGGGAGCAAGCCGTCC +
Preference number: 4 (lower is better)
Translates to: RFLPFLKVEKVWDLLISLFLEAM*SGSKPS
Trigger: GGACGGCTTGCTCCCGCTGCACATCGCCTCCAAGAA...CAAACTGATGAGCAGATCCCAGACCTTCTCTACCTTCAGGAATGGCAGAAACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR GCA 90 bp AGGTCTGGGATCTGCTCATCAGTTTGTAAACAAATGATTCTTCTCCTTGACACACGCCGCTACGGCGTATaGGCGTGCGGCTGGTCACCG +
Preference number: 4 (lower is better)
Translates to: RSGICSSVCKQMILLLDTRRYGV*ACGWSP
Trigger: CGGTGACCAGCCGCACGCGCATACGCCGTAGCGGCG...TGTGTCAAGGAGAAGAATCATTTGTTTACAAACTGATGAGCAGATCCCAGACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR GCA 90 bp TTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGAAAGCTCTGAAGTCAAGTGGTAGTACAGCGCGGAGCTaGGCCGGTCTTCGTAGAGGC +
Preference number: 4 (lower is better)
Translates to: LGHVFILVFGEKALKSSGSTARS*AGLRRG
Trigger: GCCTCTACGAAGACCGGCGCAGCTCCGCGCTGTACT...ACCACTTGACTTCAGAGCTTTCTCTCCAAAGACTAAGATGAAGACGTGGCCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR GCA 90 bp CCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGAAAGCTCTGAAGACGAACTCACAGAACTaGACCACGCTGGGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: PPTLGHVFILVFGEKALKTNSQN*TTLGSL
Trigger: CAAGGAGCCCAGCGTGGTGCAGTTCTGTGAGTTCGT...CTTCAGAGCTTTCTCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR GCA 90 bp TTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGAAAGCTCTGAAGTCAAGTGGTGAGAGGGAGGCAGCCTaGAGCCTCGTCTGTCACCAG +
Preference number: 4 (lower is better)
Translates to: LGHVFILVFGEKALKSSGEREAA*SLVCHQ
Trigger: CTGGTGACAGACGAGGCTGCAGGCTGCCTCCCTCTC...ACCACTTGACTTCAGAGCTTTCTCTCCAAAGACTAAGATGAAGACGTGGCCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR GCA 90 bp CCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGAAAGCTCTGAAGGAACACCTCAAGCTCTaGCCTGGCCCCAGGAATAGA +
Preference number: 4 (lower is better)
Translates to: PPTLGHVFILVFGEKALKEHLKL*PGPRNR
Trigger: TCTATTCCTGGGGCCAGGGCAGAGCTTGAGGTGTTC...CTTCAGAGCTTTCTCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR GCA 90 bp AACACCGACGTCCTGAGACTTAGTAAGAAGAGTCTGAGGGGCTACTCCTCTCTCAGGCTGTACTCCTCCTaGCCAATGGTACACTGGCTG +
Preference number: 4 (lower is better)
Translates to: NTDVLRLSKKSLRGYSSLRLYSS*PMVHWL
Trigger: CAGCCAGTGTACCATTGGGCAGGAGGAGTACAGCCT...GAGAGAGGAGTAGCCCCTCAGACTCTTCTTACTAAGTCTCAGGACGTCGGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555019.6
ENST00000612647.3
CDS-3UTR GCA 90 bp AGGTTTCTGCCATTCCTGAAGGTAGAGAAGGTCTGGGATCTGCTCATCAGTTTGTTGGCGGTTGGTACATaGAGACGCGGTGGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: RFLPFLKVEKVWDLLISLLAVGT*RRGGLS
Trigger: GCTGAGGCCACCGCGTCTGCATGTACCAACCGCCAA...CAAACTGATGAGCAGATCCCAGACCTTCTCTACCTTCAGGAATGGCAGAAACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555019.6
ENST00000612647.3
CDS-3UTR GCA 90 bp CCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGAAAGCTCTGAAGAGCTTCTGGCTGCTCTaGCAGGCAGTTCTGAAACGC +
Preference number: 4 (lower is better)
Translates to: PPTLGHVFILVFGEKALKSFWLL*QAVLKR
Trigger: GCGTTTCAGAACTGCCTGGCAGAGCAGCCAGAAGCT...CTTCAGAGCTTTCTCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612647.3
CDS-3UTR CCA 90 bp TTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGAAAGCTCTGAAGTCAAGTGGTGGAGGATGTGAGCCGTaGTCGGCAGGTCCCAGGATG +
Preference number: 4 (lower is better)
Translates to: LGHVFILVFGEKALKSSGGGCEP*SAGPRM
Trigger: CATCCTGGGACCTGCCGACCACGGCTCACATCCTCC...ACCACTTGACTTCAGAGCTTTCTCTCCAAAGACTAAGATGAAGACGTGGCCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315988.8
ENST00000629617.2
CDS-3UTR CCA 90 bp CCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGAAAGCTCTGAAGTTCTGCATGACCCCTTaGAACAAGCCCATTGGGGCC +
Preference number: 4 (lower is better)
Translates to: PPTLGHVFILVFGEKALKFCMTP*NKPIGA
Trigger: GGCCCCAATGGGCTTGTTCCAAGGGGTCATGCAGAA...CTTCAGAGCTTTCTCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CCA 90 bp AGGTTTCTGCCATTCCTGAAGGTAGAGAAGGTCTGGGATCTGCTCATCAGTTTGTCCGCAGGCGCCAGCTaGGAGGTCTTGAACAAGCTG +
Preference number: 4 (lower is better)
Translates to: RFLPFLKVEKVWDLLISLSAGAS*EVLNKL
Trigger: CAGCTTGTTCAAGACCTCCCAGCTGGCGCCTGCGGA...CAAACTGATGAGCAGATCCCAGACCTTCTCTACCTTCAGGAATGGCAGAAACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CCA 90 bp AGGTTTCTGCCATTCCTGAAGGTAGAGAAGGTCTGGGATCTGCTCATCAGTTTGAGGAGACAGTCCAGGTaGCCCCTGCACGTTGCCAAG +
Preference number: 4 (lower is better)
Translates to: RFLPFLKVEKVWDLLISLRRQSR*PLHVAK
Trigger: CTTGGCAACGTGCAGGGGCCACCTGGACTGTCTCCT...CAAACTGATGAGCAGATCCCAGACCTTCTCTACCTTCAGGAATGGCAGAAACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CCA 90 bp AGGTTTCTGCCATTCCTGAAGGTAGAGAAGGTCTGGGATCTGCTCATCAGTTTGGGCTCTGCCCCTGCTTaGAGCAGTGACAGGAGACAG +
Preference number: 4 (lower is better)
Translates to: RFLPFLKVEKVWDLLISLGSAPA*SSDRRQ
Trigger: CTGTCTCCTGTCACTGCTCCAAGCAGGGGCAGAGCC...CAAACTGATGAGCAGATCCCAGACCTTCTCTACCTTCAGGAATGGCAGAAACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CCA 90 bp CCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGAAAGCTCTGAAGGGTTGCAGCGGTGGTTaGTGTCTGCATTGTGCTGCA +
Preference number: 4 (lower is better)
Translates to: PPTLGHVFILVFGEKALKGCSGG*CLHCAA
Trigger: TGCAGCACAATGCAGACACCAACCACCGCTGCAACC...CTTCAGAGCTTTCTCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CCA 90 bp AACACCGACGTCCTGAGACTTAGTAAGAAGAGTCTGAGGGGCTACTCCTCTCTCGGTTGCAGCGGTGGTTaGTGTCTGCATTGTGCTGCA +
Preference number: 4 (lower is better)
Translates to: NTDVLRLSKKSLRGYSSLGCSGG*CLHCAA
Trigger: TGCAGCACAATGCAGACACCAACCACCGCTGCAACC...GAGAGAGGAGTAGCCCCTCAGACTCTTCTTACTAAGTCTCAGGACGTCGGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CCA 90 bp AGGTTTCTGCCATTCCTGAAGGTAGAGAAGGTCTGGGATCTGCTCATCAGTTTGCCGCGGTTGCAGCGGTaGTTGGTGTCTGCATTGTGC +
Preference number: 4 (lower is better)
Translates to: RFLPFLKVEKVWDLLISLPRLQR*LVSALC
Trigger: GCACAATGCAGACACCAACCACCGCTGCAACCGCGG...CAAACTGATGAGCAGATCCCAGACCTTCTCTACCTTCAGGAATGGCAGAAACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CCA 90 bp CCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGAAAGCTCTGAAGTCTTGGATTCCACCTTaGCTCCTCCGCTCACCAGGA +
Preference number: 4 (lower is better)
Translates to: PPTLGHVFILVFGEKALKSWIPP*LLRSPG
Trigger: TCCTGGTGAGCGGAGGAGCCAAGGTGGAATCCAAGA...CTTCAGAGCTTTCTCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CCA 90 bp AACACCGACGTCCTGAGACTTAGTAAGAAGAGTCTGAGGGGCTACTCCTCTCTCTGCCGTAGGCGTTCTTaGATTCCACCTTGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: NTDVLRLSKKSLRGYSSLCRRRS*IPPWLL
Trigger: GAGGAGCCAAGGTGGAATCCAAGAACGCCTACGGCA...GAGAGAGGAGTAGCCCCTCAGACTCTTCTTACTAAGTCTCAGGACGTCGGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CCA 90 bp AGGTTTCTGCCATTCCTGAAGGTAGAGAAGGTCTGGGATCTGCTCATCAGTTTGTCCAACTGTCCACTCTaGGCGGCCACGAACAAGGGG +
Preference number: 4 (lower is better)
Translates to: RFLPFLKVEKVWDLLISLSNCPL*AATNKG
Trigger: CCCCTTGTTCGTGGCCGCCCAGAGTGGACAGTTGGA...CAAACTGATGAGCAGATCCCAGACCTTCTCTACCTTCAGGAATGGCAGAAACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CCA 90 bp AACACCGACGTCCTGAGACTTAGTAAGAAGAGTCTGAGGGGCTACTCCTCTCTCTGTAGTTGCCCTTCTTaGAGGCGATGTGCAGCGGGA +
Preference number: 4 (lower is better)
Translates to: NTDVLRLSKKSLRGYSSLCSCPS*RRCAAG
Trigger: TCCCGCTGCACATCGCCTCCAAGAAGGGCAACTACA...GAGAGAGGAGTAGCCCCTCAGACTCTTCTTACTAAGTCTCAGGACGTCGGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CCA 90 bp TTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGAAAGCTCTGAAGTCAAGTGGTGTATGCGCGTGCGGCTaGTCACCGGCAGCAGCATCT +
Preference number: 4 (lower is better)
Translates to: LGHVFILVFGEKALKSSGVCACG*SPAAAS
Trigger: AGATGCTGCTGCCGGTGACCAGCCGCACGCGCATAC...ACCACTTGACTTCAGAGCTTTCTCTCCAAAGACTAAGATGAAGACGTGGCCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CCA 90 bp AGGTTTCTGCCATTCCTGAAGGTAGAGAAGGTCTGGGATCTGCTCATCAGTTTGAGGCGGTGGGGTGCGTaGCGATATAGGCGTCGATGT +
Preference number: 4 (lower is better)
Translates to: RFLPFLKVEKVWDLLISLRRWGA*RYRRRC
Trigger: ACATCGACGCCTATATCGCCACGCACCCCACCGCCT...CAAACTGATGAGCAGATCCCAGACCTTCTCTACCTTCAGGAATGGCAGAAACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CCA 90 bp CCAGGTCCCCTTGGAGTTGGGAACACCGACGTCCTGAGACTTAGTAAGAAGAGTAGAACAGACACCCAGTaGGGAGGAGGGAACAGCAAA +
Preference number: 4 (lower is better)
Translates to: PGPLGVGNTDVLRLSKKSRTDTQ*GGGNSK
Trigger: TTTGCTGTTCCCTCCTCCCCACTGGGTGTCTGTTCT...ACTCTTCTTACTAAGTCTCAGGACGTCGGTGTTCCCAACTCCAAGGGGACCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555019.6
ENST00000612647.3
CDS-3UTR CCA 90 bp CCAGGTCCCCTTGGAGTTGGGAACACCGACGTCCTGAGACTTAGTAAGAAGAGTAGTGGACCTGGTCCATaGGTAGAAATGGGCAGGTTG +
Preference number: 4 (lower is better)
Translates to: PGPLGVGNTDVLRLSKKSSGPGP*VEMGRL
Trigger: CAACCTGCCCATTTCTACCCATGGACCAGGTCCACT...ACTCTTCTTACTAAGTCTCAGGACGTCGGTGTTCCCAACTCCAAGGGGACCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555019.6
ENST00000612647.3
CDS-3UTR TCA 90 bp AGGTTTCTGCCATTCCTGAAGGTAGAGAAGGTCTGGGATCTGCTCATCAGTTTGCCCTGCGGGGCTGGATaGGAGATTCATGGCAAAGCA +
Preference number: 4 (lower is better)
Translates to: RFLPFLKVEKVWDLLISLPCGAG*EIHGKA
Trigger: TGCTTTGCCATGAATCTCTCATCCAGCCCCGCAGGG...CAAACTGATGAGCAGATCCCAGACCTTCTCTACCTTCAGGAATGGCAGAAACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315988.8
ENST00000629617.2
CDS-3UTR TCA 90 bp CCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGAAAGCTCTGAAGCCAGCTGGGAGGTCTTaGACAAGCTGCTGCTGTATT +
Preference number: 4 (lower is better)
Translates to: PPTLGHVFILVFGEKALKPAGRS*TSCCCI
Trigger: AATACAGCAGCAGCTTGTTCAAGACCTCCCAGCTGG...CTTCAGAGCTTTCTCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR TCA 90 bp TTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGAAAGCTCTGAAGTCAAGTGGTCCACGAACAAGGGGGTaGTGCCGTAGGCGTTCTTGG +
Preference number: 4 (lower is better)
Translates to: LGHVFILVFGEKALKSSGPRTRG*CRRRSW
Trigger: CCAAGAACGCCTACGGCATCACCCCCTTGTTCGTGG...ACCACTTGACTTCAGAGCTTTCTCTCCAAAGACTAAGATGAAGACGTGGCCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR TCA 90 bp TTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGAAAGCTCTGAAGTCAAGTGGTCGCTGGCCTGCGTGTTaGTGTCAGCACCGTACTTGG +
Preference number: 4 (lower is better)
Translates to: LGHVFILVFGEKALKSSGRWPAC*CQHRTW
Trigger: CCAAGTACGGTGCTGACATCAACACGCAGGCCAGCG...ACCACTTGACTTCAGAGCTTTCTCTCCAAAGACTAAGATGAAGACGTGGCCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR GCA 90 bp TTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGAAAGCTCTGAAGTCAAGTGGTACGGCTGTTTCCTCCTaGAGGGTGCGCTGGTCGATG +
Preference number: 4 (lower is better)
Translates to: LGHVFILVFGEKALKSSGTAVSS*RVRWSM
Trigger: CATCGACCAGCGCACCCTGCAGGAGGAAACAGCCGT...ACCACTTGACTTCAGAGCTTTCTCTCCAAAGACTAAGATGAAGACGTGGCCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR GCA 90 bp TTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGAAAGCTCTGAAGTCAAGTGGTCGGCCTCCGCGTTCTTaGGCTCGCAGGCTTTGTAGA +
Preference number: 4 (lower is better)
Translates to: LGHVFILVFGEKALKSSGRPPRS*ARRLCR
Trigger: TCTACAAAGCCTGCGAGCGCAAGAACGCGGAGGCCG...ACCACTTGACTTCAGAGCTTTCTCTCCAAAGACTAAGATGAAGACGTGGCCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR GCA 90 bp AACACCGACGTCCTGAGACTTAGTAAGAAGAGTCTGAGGGGCTACTCCTCTCTCGCACGATCCTGTAGTTaGCCTTCTTGGAGGCGATGT +
Preference number: 4 (lower is better)
Translates to: NTDVLRLSKKSLRGYSSLARSCS*PSWRRC
Trigger: ACATCGCCTCCAAGAAGGGCAACTACAGGATCGTGC...GAGAGAGGAGTAGCCCCTCAGACTCTTCTTACTAAGTCTCAGGACGTCGGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR GCA 90 bp AGGTTTCTGCCATTCCTGAAGGTAGAGAAGGTCTGGGATCTGCTCATCAGTTTGTTGTCCGCTAGGCTCTaGTCGATGGCCATCTGCACC +
Preference number: 4 (lower is better)
Translates to: RFLPFLKVEKVWDLLISLLSARL*SMAICT
Trigger: GGTGCAGATGGCCATCGAGCAGAGCCTAGCGGACAA...CAAACTGATGAGCAGATCCCAGACCTTCTCTACCTTCAGGAATGGCAGAAACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555019.6
ENST00000612647.3
CDS-3UTR GCA 90 bp AGGTTTCTGCCATTCCTGAAGGTAGAGAAGGTCTGGGATCTGCTCATCAGTTTGCGAACTCTCAGGAGGTaGAGTGGACCTGGTCCATGG +
Preference number: 4 (lower is better)
Translates to: RFLPFLKVEKVWDLLISLRTLRR*SGPGPW
Trigger: CCATGGACCAGGTCCACTGCACCTCCTGAGAGTTCG...CAAACTGATGAGCAGATCCCAGACCTTCTCTACCTTCAGGAATGGCAGAAACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555019.6
ENST00000612647.3
CDS-3UTR CCA 90 bp CAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGAATTATTTTTGGCCCTTaGAGGAAGCCCTGGGAGATT +
Preference number: 4 (lower is better)
Translates to: QAPPTPYLGPRLHLSLWRIIFGP*RKPWEI
Trigger: AATCTCCCAGGGCTTCCTCCAAGGGCCAAAAATAAT...TCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000315988.8
ENST00000629617.2
CDS-3UTR CCA 90 bp TTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGAAAGCTCTGAAGTCAAGTGGTGAGGTGCAGTGGACCTaGAGGGTGCAGAGCAGGAGT +
Preference number: 4 (lower is better)
Translates to: LGHVFILVFGEKALKSSGEVQWT*RVQSRS
Trigger: ACTCCTGCTCTGCACCCTCCAGGTCCACTGCACCTC...ACCACTTGACTTCAGAGCTTTCTCTCCAAAGACTAAGATGAAGACGTGGCCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315988.8
ENST00000629617.2
CDS-3UTR CCA 90 bp AGGTTTCTGCCATTCCTGAAGGTAGAGAAGGTCTGGGATCTGCTCATCAGTTTGGCCAGCCCTCCTTGTTaGGCTCTGCGAGATTCTTCC +
Preference number: 4 (lower is better)
Translates to: RFLPFLKVEKVWDLLISLASPPC*ALRDSS
Trigger: GGAAGAATCTCGCAGAGCCCAACAAGGAGGGCTGGC...CAAACTGATGAGCAGATCCCAGACCTTCTCTACCTTCAGGAATGGCAGAAACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CCA 90 bp TTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGAAAGCTCTGAAGTCAAGTGGTGGCTCTGCCCCTGCTTaGAGCAGTGACAGGAGACAG +
Preference number: 4 (lower is better)
Translates to: LGHVFILVFGEKALKSSGGSAPA*SSDRRQ
Trigger: CTGTCTCCTGTCACTGCTCCAAGCAGGGGCAGAGCC...ACCACTTGACTTCAGAGCTTTCTCTCCAAAGACTAAGATGAAGACGTGGCCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CCA 90 bp CCAGGTCCCCTTGGAGTTGGGAACACCGACGTCCTGAGACTTAGTAAGAAGAGTTGTCAGCACCGTACTTaGCTAAGAACCTCAAGGCCT +
Preference number: 4 (lower is better)
Translates to: PGPLGVGNTDVLRLSKKSCQHRT*LRTSRP
Trigger: AGGCCTTGAGGTTCTTAGCCAAGTACGGTGCTGACA...ACTCTTCTTACTAAGTCTCAGGACGTCGGTGTTCCCAACTCCAAGGGGACCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CCA 90 bp AGGTCTGGGATCTGCTCATCAGTTTGTAAACAAATGATTCTTCTCCTTGACACATCCAGCACCTCGTCGTaGTTGCGCTCGGCCGCCAGG +
Preference number: 4 (lower is better)
Translates to: RSGICSSVCKQMILLLDTSSTSS*LRSAAR
Trigger: CCTGGCGGCCGAGCGCAACCACGACGAGGTGCTGGA...TGTGTCAAGGAGAAGAATCATTTGTTTACAAACTGATGAGCAGATCCCAGACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CCA 90 bp AGGTCTGGGATCTGCTCATCAGTTTGTAAACAAATGATTCTTCTCCTTGACACAGTGCGCAGGCAGCCGTaGCGGATGGCCACGAGCAAG +
Preference number: 4 (lower is better)
Translates to: RSGICSSVCKQMILLLDTVRRQP*RMATSK
Trigger: CTTGCTCGTGGCCATCCGCCACGGCTGCCTGCGCAC...TGTGTCAAGGAGAAGAATCATTTGTTTACAAACTGATGAGCAGATCCCAGACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CCA 90 bp AGGTTTCTGCCATTCCTGAAGGTAGAGAAGGTCTGGGATCTGCTCATCAGTTTGTCGATGTTCGCGCCGTaGTCCAGCAGCAGCTGCATT +
Preference number: 4 (lower is better)
Translates to: RFLPFLKVEKVWDLLISLSMFAP*SSSSCI
Trigger: AATGCAGCTGCTGCTGGACCACGGCGCGAACATCGA...CAAACTGATGAGCAGATCCCAGACCTTCTCTACCTTCAGGAATGGCAGAAACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CCA 90 bp TTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGAAAGCTCTGAAGTCAAGTGGTAGGCGGTGGGGTGCGTaGCGATATAGGCGTCGATGT +
Preference number: 4 (lower is better)
Translates to: LGHVFILVFGEKALKSSGRRWGA*RYRRRC
Trigger: ACATCGACGCCTATATCGCCACGCACCCCACCGCCT...ACCACTTGACTTCAGAGCTTTCTCTCCAAAGACTAAGATGAAGACGTGGCCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CCA 90 bp AGGTTTCTGCCATTCCTGAAGGTAGAGAAGGTCTGGGATCTGCTCATCAGTTTGCCAGCGGCTCACCTCTaGGGCAGATACGAACTCACA +
Preference number: 4 (lower is better)
Translates to: RFLPFLKVEKVWDLLISLPAAHL*GRYELT
Trigger: TGTGAGTTCGTATCTGCCCCAGAGGTGAGCCGCTGG...CAAACTGATGAGCAGATCCCAGACCTTCTCTACCTTCAGGAATGGCAGAAACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CCA 90 bp AACACCGACGTCCTGAGACTTAGTAAGAAGAGTCTGAGGGGCTACTCCTCTCTCGTGAGCCAGAGGTCTTaGAGGTTCTGCCTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: NTDVLRLSKKSLRGYSSLVSQRS*RFCLLL
Trigger: AAGGAGAAGGCAGAACCTCCAAGACCTCTGGCTCAC...GAGAGAGGAGTAGCCCCTCAGACTCTTCTTACTAAGTCTCAGGACGTCGGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CCA 90 bp CCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGAAAGCTCTGAAGGTGAGCCAGAGGTCTTaGAGGTTCTGCCTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: PPTLGHVFILVFGEKALKVSQRS*RFCLLL
Trigger: AAGGAGAAGGCAGAACCTCCAAGACCTCTGGCTCAC...CTTCAGAGCTTTCTCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CCA 90 bp CCAGGTCCCCTTGGAGTTGGGAACACCGACGTCCTGAGACTTAGTAAGAAGAGTTACGGTATTTCCCAATaGCCTTTCGAACCCGCAGTC +
Preference number: 4 (lower is better)
Translates to: PGPLGVGNTDVLRLSKKSYGISQ*PFEPAV
Trigger: GACTGCGGGTTCGAAAGGCCATTGGGAAATACCGTA...ACTCTTCTTACTAAGTCTCAGGACGTCGGTGTTCCCAACTCCAAGGGGACCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CCA 90 bp AGGTTTCTGCCATTCCTGAAGGTAGAGAAGGTCTGGGATCTGCTCATCAGTTTGAGGTCCCCTTGGAGTTaGGAACACCGACGTCCTGAG +
Preference number: 4 (lower is better)
Translates to: RFLPFLKVEKVWDLLISLRSPWS*EHRRPE
Trigger: CTCAGGACGTCGGTGTTCCCAACTCCAAGGGGACCT...CAAACTGATGAGCAGATCCCAGACCTTCTCTACCTTCAGGAATGGCAGAAACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CCA 90 bp TTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGAAAGCTCTGAAGTCAAGTGGTCTCTGGCCAAAGCTCTaGGCCCTGAGACCCAGTGAG +
Preference number: 4 (lower is better)
Translates to: LGHVFILVFGEKALKSSGLWPKL*ALRPSE
Trigger: CTCACTGGGTCTCAGGGCCCAGAGCTTTGGCCAGAG...ACCACTTGACTTCAGAGCTTTCTCTCCAAAGACTAAGATGAAGACGTGGCCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CCA 90 bp AGGTTTCTGCCATTCCTGAAGGTAGAGAAGGTCTGGGATCTGCTCATCAGTTTGTGCCCAATGGTACACTaGCTGCCCCGAGTGCTGATC +
Preference number: 4 (lower is better)
Translates to: RFLPFLKVEKVWDLLISLCPMVH*LPRVLI
Trigger: GATCAGCACTCGGGGCAGCCAGTGTACCATTGGGCA...CAAACTGATGAGCAGATCCCAGACCTTCTCTACCTTCAGGAATGGCAGAAACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555019.6
ENST00000612647.3
CDS-3UTR CCA 90 bp CCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGAAAGCTCTGAAGCTAGGCTCTGCTCGATaGCCATCTGCACCAGTTCAT +
Preference number: 4 (lower is better)
Translates to: PPTLGHVFILVFGEKALKLGSAR*PSAPVH
Trigger: ATGAACTGGTGCAGATGGCCATCGAGCAGAGCCTAG...CTTCAGAGCTTTCTCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000555019.6
ENST00000612647.3
CDS-3UTR CCA 90 bp TTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGAAAGCTCTGAAGTCAAGTGGTTACATGCAGACGCGGTaGCCTCAGCAGTGGTTGGGC +
Preference number: 4 (lower is better)
Translates to: LGHVFILVFGEKALKSSGYMQTR*PQQWLG
Trigger: GCCCAACCACTGCTGAGGCCACCGCGTCTGCATGTA...ACCACTTGACTTCAGAGCTTTCTCTCCAAAGACTAAGATGAAGACGTGGCCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555019.6
ENST00000612647.3
CDS-3UTR TCA 90 bp AGGTCTGGGATCTGCTCATCAGTTTGTAAACAAATGATTCTTCTCCTTGACACATCACCCAGGAGGATGTaGGCCGTGGTCGGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: RSGICSSVCKQMILLLDTSPRRM*AVVGRS
Trigger: GGACCTGCCGACCACGGCTCACATCCTCCTGGGTGA...TGTGTCAAGGAGAAGAATCATTTGTTTACAAACTGATGAGCAGATCCCAGACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315988.8
ENST00000629617.2
CDS-3UTR TCA 90 bp AACACCGACGTCCTGAGACTTAGTAAGAAGAGTCTGAGGGGCTACTCCTCTCTCGGTGCAGAGCAGGAGTaGAAGAGGGAAAAGTACTCT +
Preference number: 4 (lower is better)
Translates to: NTDVLRLSKKSLRGYSSLGAEQE*KREKYS
Trigger: AGAGTACTTTTCCCTCTTTCACTCCTGCTCTGCACC...GAGAGAGGAGTAGCCCCTCAGACTCTTCTTACTAAGTCTCAGGACGTCGGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315988.8
ENST00000629617.2
CDS-3UTR TCA 90 bp AACACCGACGTCCTGAGACTTAGTAAGAAGAGTCTGAGGGGCTACTCCTCTCTCTGCTGTATTTCTGCATaGCCCCTTGGAACAAGCCCA +
Preference number: 4 (lower is better)
Translates to: NTDVLRLSKKSLRGYSSLCCISA*PLGTSP
Trigger: TGGGCTTGTTCCAAGGGGTCATGCAGAAATACAGCA...GAGAGAGGAGTAGCCCCTCAGACTCTTCTTACTAAGTCTCAGGACGTCGGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR TCA 90 bp CCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGAAAGCTCTGAAGCTTCATCGCCATCCTTaGTGGCCTTTATCAAGGGGT +
Preference number: 4 (lower is better)
Translates to: PPTLGHVFILVFGEKALKLHRHP*WPLSRG
Trigger: ACCCCTTGATAAAGGCCATCAAGGATGGCGATGAAG...CTTCAGAGCTTTCTCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR TCA 90 bp CCAGGTCCCCTTGGAGTTGGGAACACCGACGTCCTGAGACTTAGTAAGAAGAGTGATTCTTCCCTTCCTTaGTCATGGTCTTCAAGGCCT +
Preference number: 4 (lower is better)
Translates to: PGPLGVGNTDVLRLSKKSDSSLP*SWSSRP
Trigger: AGGCCTTGAAGACCATGATCAAGGAAGGGAAGAATC...ACTCTTCTTACTAAGTCTCAGGACGTCGGTGTTCCCAACTCCAAGGGGACCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR TCA 90 bp AACACCGACGTCCTGAGACTTAGTAAGAAGAGTCTGAGGGGCTACTCCTCTCTCGGAACACCGACGTCCTaGGACTTAGTAAGAAGAGTC +
Preference number: 4 (lower is better)
Translates to: NTDVLRLSKKSLRGYSSLGTPTS*DLVRRV
Trigger: GACTCTTCTTACTAAGTCTCAGGACGTCGGTGTTCC...GAGAGAGGAGTAGCCCCTCAGACTCTTCTTACTAAGTCTCAGGACGTCGGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR GCA 90 bp TTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGAAAGCTCTGAAGTCAAGTGGTAGTCCAGGTGGCCCCTaGACGTTGCCAAGTAAACGG +
Preference number: 4 (lower is better)
Translates to: LGHVFILVFGEKALKSSGSPGGP*TLPSKR
Trigger: CCGTTTACTTGGCAACGTGCAGGGGCCACCTGGACT...ACCACTTGACTTCAGAGCTTTCTCTCCAAAGACTAAGATGAAGACGTGGCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR GCA 90 bp AGGTTTCTGCCATTCCTGAAGGTAGAGAAGGTCTGGGATCTGCTCATCAGTTTGTCCACCACCTCCTCATaGTCATTCTTGCAGGCCTCG +
Preference number: 4 (lower is better)
Translates to: RFLPFLKVEKVWDLLISLSTTSS*SFLQAS
Trigger: CGAGGCCTGCAAGAATGAGCATGAGGAGGTGGTGGA...CAAACTGATGAGCAGATCCCAGACCTTCTCTACCTTCAGGAATGGCAGAAACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR GCA 90 bp AGGTCTGGGATCTGCTCATCAGTTTGTAAACAAATGATTCTTCTCCTTGACACATACGGCGTATGCGCGTaGGGCTGGTCACCGGCAGCA +
Preference number: 4 (lower is better)
Translates to: RSGICSSVCKQMILLLDTYGVCA*GWSPAA
Trigger: TGCTGCCGGTGACCAGCCGCACGCGCATACGCCGTA...TGTGTCAAGGAGAAGAATCATTTGTTTACAAACTGATGAGCAGATCCCAGACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR GCA 90 bp AACACCGACGTCCTGAGACTTAGTAAGAAGAGTCTGAGGGGCTACTCCTCTCTCACACATTCTGTTCTCTaGTCTGGCCAAAGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: NTDVLRLSKKSLRGYSSLTHSVL*SGQSSG
Trigger: CCCAGAGCTTTGGCCAGAGCAGAGAACAGAATGTGT...GAGAGAGGAGTAGCCCCTCAGACTCTTCTTACTAAGTCTCAGGACGTCGGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CCA 90 bp AGGTCTGGGATCTGCTCATCAGTTTGTAAACAAATGATTCTTCTCCTTGACACAGCTCAGGCTCACTGCTaGCCAGGCAGATCCCTGCGG +
Preference number: 4 (lower is better)
Translates to: RSGICSSVCKQMILLLDTAQAHC*PGRSLR
Trigger: CCGCAGGGATCTGCCTGGCCAGCAGTGAGCCTGAGC...TGTGTCAAGGAGAAGAATCATTTGTTTACAAACTGATGAGCAGATCCCAGACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315988.8
ENST00000629617.2
CDS-3UTR CCA 90 bp AACACCGACGTCCTGAGACTTAGTAAGAAGAGTCTGAGGGGCTACTCCTCTCTCTCTCCGGATTATTTTTaGCCCTTGGAGGAAGCCCTG +
Preference number: 4 (lower is better)
Translates to: NTDVLRLSKKSLRGYSSLSPDYF*PLEEAL
Trigger: CAGGGCTTCCTCCAAGGGCCAAAAATAATCCGGAGA...GAGAGAGGAGTAGCCCCTCAGACTCTTCTTACTAAGTCTCAGGACGTCGGTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315988.8
ENST00000629617.2
CDS-3UTR CCA 90 bp AGGTCTGGGATCTGCTCATCAGTTTGTAAACAAATGATTCTTCTCCTTGACACAGGGTGCGCTGGTCGATaGTCCCTGGGTACGCTCGCT +
Preference number: 4 (lower is better)
Translates to: RSGICSSVCKQMILLLDTGCAGR*SLGTLA
Trigger: AGCGAGCGTACCCAGGGACCATCGACCAGCGCACCC...TGTGTCAAGGAGAAGAATCATTTGTTTACAAACTGATGAGCAGATCCCAGACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CCA 90 bp AGGTTTCTGCCATTCCTGAAGGTAGAGAAGGTCTGGGATCTGCTCATCAGTTTGTCTCTCGGGATTTGTTaGAGATGTCCGGCTCTGCCC +
Preference number: 4 (lower is better)
Translates to: RFLPFLKVEKVWDLLISLSLGIC*RCPALP
Trigger: GGGCAGAGCCGGACATCTCCAACAAATCCCGAGAGA...CAAACTGATGAGCAGATCCCAGACCTTCTCTACCTTCAGGAATGGCAGAAACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CCA 90 bp AGGTTTCTGCCATTCCTGAAGGTAGAGAAGGTCTGGGATCTGCTCATCAGTTTGCCTTGTTGGTCTTGTTaGCGTCGGCACCCTGTGACA +
Preference number: 4 (lower is better)
Translates to: RFLPFLKVEKVWDLLISLPCWSC*RRHPVT
Trigger: TGTCACAGGGTGCCGACGCCAACAAGACCAACAAGG...CAAACTGATGAGCAGATCCCAGACCTTCTCTACCTTCAGGAATGGCAGAAACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CCA 90 bp TTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGAAAGCTCTGAAGTCAAGTGGTGCAAGCCGTCCTTGTTaGTCTTGTTGGCGTCGGCAC +
Preference number: 4 (lower is better)
Translates to: LGHVFILVFGEKALKSSGASRPC*SCWRRH
Trigger: GTGCCGACGCCAACAAGACCAACAAGGACGGCTTGC...ACCACTTGACTTCAGAGCTTTCTCTCCAAAGACTAAGATGAAGACGTGGCCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CCA 90 bp TTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGAAAGCTCTGAAGTCAAGTGGTACTCCTCTCTCCCCGTaGCCCCAGTTACTGGGTGTT +
Preference number: 4 (lower is better)
Translates to: LGHVFILVFGEKALKSSGTPLSP*PQLLGV
Trigger: AACACCCAGTAACTGGGGCCACGGGGAGAGAGGAGT...ACCACTTGACTTCAGAGCTTTCTCTCCAAAGACTAAGATGAAGACGTGGCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR TCA 90 bp AACACCGACGTCCTGAGACTTAGTAAGAAGAGTCTGAGGGGCTACTCCTCTCTCGATTCTTCCCTTCCTTaGTCATGGTCTTCAAGGCCT +
Preference number: 4 (lower is better)
Translates to: NTDVLRLSKKSLRGYSSLDSSLP*SWSSRP
Trigger: AGGCCTTGAAGACCATGATCAAGGAAGGGAAGAATC...GAGAGAGGAGTAGCCCCTCAGACTCTTCTTACTAAGTCTCAGGACGTCGGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR TCA 90 bp CCAGGTCCCCTTGGAGTTGGGAACACCGACGTCCTGAGACTTAGTAAGAAGAGTAACCCTGTTAGGCTCTaGAACAAGGGTACAATTCAG +
Preference number: 4 (lower is better)
Translates to: PGPLGVGNTDVLRLSKKSNPVRL*NKGTIQ
Trigger: CTGAATTGTACCCTTGTTTCAGAGCCTAACAGGGTT...ACTCTTCTTACTAAGTCTCAGGACGTCGGTGTTCCCAACTCCAAGGGGACCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555019.6
ENST00000612647.3
CDS-3UTR GCA 90 bp AACACCGACGTCCTGAGACTTAGTAAGAAGAGTCTGAGGGGCTACTCCTCTCTCTGTGCTGGACACAGCTaGTGTGTCTCCGGATTATTT +
Preference number: 4 (lower is better)
Translates to: NTDVLRLSKKSLRGYSSLCAGHS*CVSGLF
Trigger: AAATAATCCGGAGACACAGCAGCTGTGTCCAGCACA...GAGAGAGGAGTAGCCCCTCAGACTCTTCTTACTAAGTCTCAGGACGTCGGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315988.8
ENST00000629617.2
CDS-3UTR GCA 90 bp AACACCGACGTCCTGAGACTTAGTAAGAAGAGTCTGAGGGGCTACTCCTCTCTCTTGGTGTCTGCATTGTaGTGCACCAGAATCTTCACG +
Preference number: 4 (lower is better)
Translates to: NTDVLRLSKKSLRGYSSLLVSAL*CTRIFT
Trigger: CGTGAAGATTCTGGTGCAGCACAATGCAGACACCAA...GAGAGAGGAGTAGCCCCTCAGACTCTTCTTACTAAGTCTCAGGACGTCGGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR GCA 90 bp AGGTTTCTGCCATTCCTGAAGGTAGAGAAGGTCTGGGATCTGCTCATCAGTTTGGCGGTGGTTGGTGTCTaGATTGTGCTGCACCAGAAT +
Preference number: 4 (lower is better)
Translates to: RFLPFLKVEKVWDLLISLAVVGV*IVLHQN
Trigger: ATTCTGGTGCAGCACAATGCAGACACCAACCACCGC...CAAACTGATGAGCAGATCCCAGACCTTCTCTACCTTCAGGAATGGCAGAAACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR GCA 90 bp TTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGAAAGCTCTGAAGTCAAGTGGTCCTCATGCTCATTCTTaGAGGCCTCGTAGAGGGCAG +
Preference number: 4 (lower is better)
Translates to: LGHVFILVFGEKALKSSGPHAHS*RPRRGQ
Trigger: CTGCCCTCTACGAGGCCTGCAAGAATGAGCATGAGG...ACCACTTGACTTCAGAGCTTTCTCTCCAAAGACTAAGATGAAGACGTGGCCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR GCA 90 bp TTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGAAAGCTCTGAAGTCAAGTGGTTCCACCACCTCCTCATaGTCATTCTTGCAGGCCTCG +
Preference number: 4 (lower is better)
Translates to: LGHVFILVFGEKALKSSGSTTSS*SFLQAS
Trigger: CGAGGCCTGCAAGAATGAGCATGAGGAGGTGGTGGA...ACCACTTGACTTCAGAGCTTTCTCTCCAAAGACTAAGATGAAGACGTGGCCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR GCA 90 bp AGGTTTCTGCCATTCCTGAAGGTAGAGAAGGTCTGGGATCTGCTCATCAGTTTGGCACGATCCTGTAGTTaGCCTTCTTGGAGGCGATGT +
Preference number: 4 (lower is better)
Translates to: RFLPFLKVEKVWDLLISLARSCS*PSWRRC
Trigger: ACATCGCCTCCAAGAAGGGCAACTACAGGATCGTGC...CAAACTGATGAGCAGATCCCAGACCTTCTCTACCTTCAGGAATGGCAGAAACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR GCA 90 bp TTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGAAAGCTCTGAAGTCAAGTGGTACGAACTCACAGAACTaGACCACGCTGGGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: LGHVFILVFGEKALKSSGTNSQN*TTLGSL
Trigger: CAAGGAGCCCAGCGTGGTGCAGTTCTGTGAGTTCGT...ACCACTTGACTTCAGAGCTTTCTCTCCAAAGACTAAGATGAAGACGTGGCCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR GCA 90 bp TTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGAAAGCTCTGAAGTCAAGTGGTGAACACCTCAAGCTCTaGCCTGGCCCCAGGAATAGA +
Preference number: 4 (lower is better)
Translates to: LGHVFILVFGEKALKSSGEHLKL*PGPRNR
Trigger: TCTATTCCTGGGGCCAGGGCAGAGCTTGAGGTGTTC...ACCACTTGACTTCAGAGCTTTCTCTCCAAAGACTAAGATGAAGACGTGGCCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR GCA 90 bp CCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGAAAGCTCTGAAGTTCCTGTTTGGAGGTTaGACTGAGGAAGCTGCAATC +
Preference number: 4 (lower is better)
Translates to: PPTLGHVFILVFGEKALKFLFGG*TEEAAI
Trigger: GATTGCAGCTTCCTCAGTGCAACCTCCAAACAGGAA...CTTCAGAGCTTTCTCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612647.3
CDS-3UTR CCA 90 bp TTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGAAAGCTCTGAAGTCAAGTGGTTTCTGCATGACCCCTTaGAACAAGCCCATTGGGGCC +
Preference number: 4 (lower is better)
Translates to: LGHVFILVFGEKALKSSGFCMTP*NKPIGA
Trigger: GGCCCCAATGGGCTTGTTCCAAGGGGTCATGCAGAA...ACCACTTGACTTCAGAGCTTTCTCTCCAAAGACTAAGATGAAGACGTGGCCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CCA 90 bp TTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGAAAGCTCTGAAGTCAAGTGGTCCTTGTTGGTCTTGTTaGCGTCGGCACCCTGTGACA +
Preference number: 4 (lower is better)
Translates to: LGHVFILVFGEKALKSSGPCWSC*RRHPVT
Trigger: TGTCACAGGGTGCCGACGCCAACAAGACCAACAAGG...ACCACTTGACTTCAGAGCTTTCTCTCCAAAGACTAAGATGAAGACGTGGCCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CCA 90 bp AGGTCTGGGATCTGCTCATCAGTTTGTAAACAAATGATTCTTCTCCTTGACACAGTATGCGCGTGCGGCTaGTCACCGGCAGCAGCATCT +
Preference number: 4 (lower is better)
Translates to: RSGICSSVCKQMILLLDTVCACG*SPAAAS
Trigger: AGATGCTGCTGCCGGTGACCAGCCGCACGCGCATAC...TGTGTCAAGGAGAAGAATCATTTGTTTACAAACTGATGAGCAGATCCCAGACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CCA 90 bp AGGTTTCTGCCATTCCTGAAGGTAGAGAAGGTCTGGGATCTGCTCATCAGTTTGCGTGGCCCCAGTTACTaGGTGTTCTCGTATTTCAGG +
Preference number: 4 (lower is better)
Translates to: RFLPFLKVEKVWDLLISLRGPSY*VFSYFR
Trigger: CCTGAAATACGAGAACACCCAGTAACTGGGGCCACG...CAAACTGATGAGCAGATCCCAGACCTTCTCTACCTTCAGGAATGGCAGAAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CCA 90 bp AGGTCTGGGATCTGCTCATCAGTTTGTAAACAAATGATTCTTCTCCTTGACACAGGCCTCAGCAGTGGTTaGGCCCCTTGTCTTGTCCGC +
Preference number: 4 (lower is better)
Translates to: RSGICSSVCKQMILLLDTGLSSG*APCLVR
Trigger: GCGGACAAGACAAGGGGCCCAACCACTGCTGAGGCC...TGTGTCAAGGAGAAGAATCATTTGTTTACAAACTGATGAGCAGATCCCAGACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555019.6
ENST00000612647.3
CDS-3UTR TCA 90 bp TTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGAAAGCTCTGAAGTCAAGTGGTCCAGCTGGGAGGTCTTaGACAAGCTGCTGCTGTATT +
Preference number: 4 (lower is better)
Translates to: LGHVFILVFGEKALKSSGPAGRS*TSCCCI
Trigger: AATACAGCAGCAGCTTGTTCAAGACCTCCCAGCTGG...ACCACTTGACTTCAGAGCTTTCTCTCCAAAGACTAAGATGAAGACGTGGCCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR TCA 90 bp AGGTCTGGGATCTGCTCATCAGTTTGTAAACAAATGATTCTTCTCCTTGACACACGCTGGCCTGCGTGTTaGTGTCAGCACCGTACTTGG +
Preference number: 4 (lower is better)
Translates to: RSGICSSVCKQMILLLDTRWPAC*CQHRTW
Trigger: CCAAGTACGGTGCTGACATCAACACGCAGGCCAGCG...TGTGTCAAGGAGAAGAATCATTTGTTTACAAACTGATGAGCAGATCCCAGACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR TCA 90 bp AGGTCTGGGATCTGCTCATCAGTTTGTAAACAAATGATTCTTCTCCTTGACACAACTTCATGGCGAACATaGTGGTGGCGGGGAAGGCGG +
Preference number: 4 (lower is better)
Translates to: RSGICSSVCKQMILLLDTTSWRT*WWRGRR
Trigger: CCGCCTTCCCCGCCACCATCATGTTCGCCATGAAGT...TGTGTCAAGGAGAAGAATCATTTGTTTACAAACTGATGAGCAGATCCCAGACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR TCA 90 bp AGGTCTGGGATCTGCTCATCAGTTTGTAAACAAATGATTCTTCTCCTTGACACACGCAGTCGGCAAAGGTaGGCCAGAGGTCTTGGAGGT +
Preference number: 4 (lower is better)
Translates to: RSGICSSVCKQMILLLDTRSRQR*ARGLGG
Trigger: ACCTCCAAGACCTCTGGCTCACCTTTGCCGACTGCG...TGTGTCAAGGAGAAGAATCATTTGTTTACAAACTGATGAGCAGATCCCAGACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR TCA 90 bp AGGTTTCTGCCATTCCTGAAGGTAGAGAAGGTCTGGGATCTGCTCATCAGTTTGGGAACACCGACGTCCTaGGACTTAGTAAGAAGAGTC +
Preference number: 4 (lower is better)
Translates to: RFLPFLKVEKVWDLLISLGTPTS*DLVRRV
Trigger: GACTCTTCTTACTAAGTCTCAGGACGTCGGTGTTCC...CAAACTGATGAGCAGATCCCAGACCTTCTCTACCTTCAGGAATGGCAGAAACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR TCA 90 bp AGGTCTGGGATCTGCTCATCAGTTTGTAAACAAATGATTCTTCTCCTTGACACAGGCCCTGAGACCCAGTaGGATCCTGGTAGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: RSGICSSVCKQMILLLDTGPETQ*DPGSCP
Trigger: TGGACAGCTACCAGGATCTCACTGGGTCTCAGGGCC...TGTGTCAAGGAGAAGAATCATTTGTTTACAAACTGATGAGCAGATCCCAGACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR TCA 90 bp AACACCGACGTCCTGAGACTTAGTAAGAAGAGTCTGAGGGGCTACTCCTCTCTCTCTGAAGTCAAGTGGTaGGTTTTCCAGAACAAGTGG +
Preference number: 4 (lower is better)
Translates to: NTDVLRLSKKSLRGYSSLSEVKW*VFQNKW
Trigger: CCACTTGTTCTGGAAAACTCACCACTTGACTTCAGA...GAGAGAGGAGTAGCCCCTCAGACTCTTCTTACTAAGTCTCAGGACGTCGGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR TCA 90 bp CCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGAAAGCTCTGAAGAACCCTGTTAGGCTCTaGAACAAGGGTACAATTCAG +
Preference number: 4 (lower is better)
Translates to: PPTLGHVFILVFGEKALKNPVRL*NKGTIQ
Trigger: CTGAATTGTACCCTTGTTTCAGAGCCTAACAGGGTT...CTTCAGAGCTTTCTCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000555019.6
ENST00000612647.3
CDS-3UTR GCA 90 bp AGGTTTCTGCCATTCCTGAAGGTAGAGAAGGTCTGGGATCTGCTCATCAGTTTGCTCCTTGTTGGGCTCTaGGAGATTCTTCCCTTCCTT +
Preference number: 4 (lower is better)
Translates to: RFLPFLKVEKVWDLLISLLLVGL*EILPFL
Trigger: AAGGAAGGGAAGAATCTCGCAGAGCCCAACAAGGAG...CAAACTGATGAGCAGATCCCAGACCTTCTCTACCTTCAGGAATGGCAGAAACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR GCA 90 bp AGGTCTGGGATCTGCTCATCAGTTTGTAAACAAATGATTCTTCTCCTTGACACAACGGCTGTTTCCTCCTaGAGGGTGCGCTGGTCGATG +
Preference number: 4 (lower is better)
Translates to: RSGICSSVCKQMILLLDTTAVSS*RVRWSM
Trigger: CATCGACCAGCGCACCCTGCAGGAGGAAACAGCCGT...TGTGTCAAGGAGAAGAATCATTTGTTTACAAACTGATGAGCAGATCCCAGACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR GCA 90 bp AGGTCTGGGATCTGCTCATCAGTTTGTAAACAAATGATTCTTCTCCTTGACACACGGCCTCCGCGTTCTTaGGCTCGCAGGCTTTGTAGA +
Preference number: 4 (lower is better)
Translates to: RSGICSSVCKQMILLLDTRPPRS*ARRLCR
Trigger: TCTACAAAGCCTGCGAGCGCAAGAACGCGGAGGCCG...TGTGTCAAGGAGAAGAATCATTTGTTTACAAACTGATGAGCAGATCCCAGACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR GCA 90 bp AGGTTTCTGCCATTCCTGAAGGTAGAGAAGGTCTGGGATCTGCTCATCAGTTTGTTCCGTTCCTCCGGGTaGATCGAATACAGACTCTCA +
Preference number: 4 (lower is better)
Translates to: RFLPFLKVEKVWDLLISLFRSSG*IEYRLS
Trigger: TGAGAGTCTGTATTCGATGCACCCGGAGGAACGGAA...CAAACTGATGAGCAGATCCCAGACCTTCTCTACCTTCAGGAATGGCAGAAACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612647.3
CDS-3UTR CCA 90 bp AACACCGACGTCCTGAGACTTAGTAAGAAGAGTCTGAGGGGCTACTCCTCTCTCAAGGTAGAGAAGGTCTaGGATCTGCTCATCAGTTTG +
Preference number: 4 (lower is better)
Translates to: NTDVLRLSKKSLRGYSSLKVEKV*DLLISL
Trigger: CAAACTGATGAGCAGATCCCAGACCTTCTCTACCTT...GAGAGAGGAGTAGCCCCTCAGACTCTTCTTACTAAGTCTCAGGACGTCGGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CCA 90 bp TTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGAAAGCTCTGAAGTCAAGTGGTAGAACAGACACCCAGTaGGGAGGAGGGAACAGCAAA +
Preference number: 4 (lower is better)
Translates to: LGHVFILVFGEKALKSSGRTDTQ*GGGNSK
Trigger: TTTGCTGTTCCCTCCTCCCCACTGGGTGTCTGTTCT...ACCACTTGACTTCAGAGCTTTCTCTCCAAAGACTAAGATGAAGACGTGGCCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555019.6
ENST00000612647.3
CDS-3UTR TCA 90 bp TTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGAAAGCTCTGAAGTCAAGTGGTTGCTGTATTTCTGCATaGCCCCTTGGAACAAGCCCA +
Preference number: 4 (lower is better)
Translates to: LGHVFILVFGEKALKSSGCCISA*PLGTSP
Trigger: TGGGCTTGTTCCAAGGGGTCATGCAGAAATACAGCA...ACCACTTGACTTCAGAGCTTTCTCTCCAAAGACTAAGATGAAGACGTGGCCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR GCA 90 bp TTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGAAAGCTCTGAAGTCAAGTGGTCTCCTTGTTGGGCTCTaGGAGATTCTTCCCTTCCTT +
Preference number: 4 (lower is better)
Translates to: LGHVFILVFGEKALKSSGLLVGL*EILPFL
Trigger: AAGGAAGGGAAGAATCTCGCAGAGCCCAACAAGGAG...ACCACTTGACTTCAGAGCTTTCTCTCCAAAGACTAAGATGAAGACGTGGCCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR GCA 90 bp TTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGAAAGCTCTGAAGTCAAGTGGTACACATTCTGTTCTCTaGTCTGGCCAAAGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: LGHVFILVFGEKALKSSGTHSVL*SGQSSG
Trigger: CCCAGAGCTTTGGCCAGAGCAGAGAACAGAATGTGT...ACCACTTGACTTCAGAGCTTTCTCTCCAAAGACTAAGATGAAGACGTGGCCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CCA 90 bp AGGTCTGGGATCTGCTCATCAGTTTGTAAACAAATGATTCTTCTCCTTGACACAGCCAGCCCTCCTTGTTaGGCTCTGCGAGATTCTTCC +
Preference number: 4 (lower is better)
Translates to: RSGICSSVCKQMILLLDTASPPC*ALRDSS
Trigger: GGAAGAATCTCGCAGAGCCCAACAAGGAGGGCTGGC...TGTGTCAAGGAGAAGAATCATTTGTTTACAAACTGATGAGCAGATCCCAGACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CCA 90 bp AGGTCTGGGATCTGCTCATCAGTTTGTAAACAAATGATTCTTCTCCTTGACACAGTCACCAGGTCCCCTTaGAGTTGGGAACACCGACGT +
Preference number: 4 (lower is better)
Translates to: RSGICSSVCKQMILLLDTVTRSP*SWEHRR
Trigger: ACGTCGGTGTTCCCAACTCCAAGGGGACCTGGTGAC...TGTGTCAAGGAGAAGAATCATTTGTTTACAAACTGATGAGCAGATCCCAGACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR TCA 90 bp TTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGAAAGCTCTGAAGTCAAGTGGTGATTCTTCCCTTCCTTaGTCATGGTCTTCAAGGCCT +
Preference number: 4 (lower is better)
Translates to: LGHVFILVFGEKALKSSGDSSLP*SWSSRP
Trigger: AGGCCTTGAAGACCATGATCAAGGAAGGGAAGAATC...ACCACTTGACTTCAGAGCTTTCTCTCCAAAGACTAAGATGAAGACGTGGCCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR TCA 90 bp AGGTCTGGGATCTGCTCATCAGTTTGTAAACAAATGATTCTTCTCCTTGACACATCACCAGGATCTGCATaGCCTCCAGGTCATTGCGAG +
Preference number: 4 (lower is better)
Translates to: RSGICSSVCKQMILLLDTSPGSA*PPGHCE
Trigger: CTCGCAATGACCTGGAGGTCATGCAGATCCTGGTGA...TGTGTCAAGGAGAAGAATCATTTGTTTACAAACTGATGAGCAGATCCCAGACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR TCA 90 bp AGGTTTCTGCCATTCCTGAAGGTAGAGAAGGTCTGGGATCTGCTCATCAGTTTGTCTGAAGTCAAGTGGTaGGTTTTCCAGAACAAGTGG +
Preference number: 4 (lower is better)
Translates to: RFLPFLKVEKVWDLLISLSEVKW*VFQNKW
Trigger: CCACTTGTTCTGGAAAACTCACCACTTGACTTCAGA...CAAACTGATGAGCAGATCCCAGACCTTCTCTACCTTCAGGAATGGCAGAAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR GCA 90 bp AGGTCTGGGATCTGCTCATCAGTTTGTAAACAAATGATTCTTCTCCTTGACACACCGCTCACCAGGATCTaGATGACCTCCAGGTCATTG +
Preference number: 4 (lower is better)
Translates to: RSGICSSVCKQMILLLDTPLTRI*MTSRSL
Trigger: CAATGACCTGGAGGTCATGCAGATCCTGGTGAGCGG...TGTGTCAAGGAGAAGAATCATTTGTTTACAAACTGATGAGCAGATCCCAGACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR GCA 90 bp AGGTCTGGGATCTGCTCATCAGTTTGTAAACAAATGATTCTTCTCCTTGACACAACGAACTCACAGAACTaGACCACGCTGGGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: RSGICSSVCKQMILLLDTTNSQN*TTLGSL
Trigger: CAAGGAGCCCAGCGTGGTGCAGTTCTGTGAGTTCGT...TGTGTCAAGGAGAAGAATCATTTGTTTACAAACTGATGAGCAGATCCCAGACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR GCA 90 bp AGGTCTGGGATCTGCTCATCAGTTTGTAAACAAATGATTCTTCTCCTTGACACAGAACACCTCAAGCTCTaGCCTGGCCCCAGGAATAGA +
Preference number: 4 (lower is better)
Translates to: RSGICSSVCKQMILLLDTEHLKL*PGPRNR
Trigger: TCTATTCCTGGGGCCAGGGCAGAGCTTGAGGTGTTC...TGTGTCAAGGAGAAGAATCATTTGTTTACAAACTGATGAGCAGATCCCAGACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR GCA 90 bp AGGTCTGGGATCTGCTCATCAGTTTGTAAACAAATGATTCTTCTCCTTGACACATGCTCGATGGCCATCTaGACCAGTTCATCCTCGCTC +
Preference number: 4 (lower is better)
Translates to: RSGICSSVCKQMILLLDTCSMAI*TSSSSL
Trigger: GAGCGAGGATGAACTGGTGCAGATGGCCATCGAGCA...TGTGTCAAGGAGAAGAATCATTTGTTTACAAACTGATGAGCAGATCCCAGACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555019.6
ENST00000612647.3
CDS-3UTR CCA 90 bp AGGTCTGGGATCTGCTCATCAGTTTGTAAACAAATGATTCTTCTCCTTGACACATCTCTCGGGATTTGTTaGAGATGTCCGGCTCTGCCC +
Preference number: 4 (lower is better)
Translates to: RSGICSSVCKQMILLLDTSLGIC*RCPALP
Trigger: GGGCAGAGCCGGACATCTCCAACAAATCCCGAGAGA...TGTGTCAAGGAGAAGAATCATTTGTTTACAAACTGATGAGCAGATCCCAGACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CCA 90 bp AGGTCTGGGATCTGCTCATCAGTTTGTAAACAAATGATTCTTCTCCTTGACACAGGTTGCAGCGGTGGTTaGTGTCTGCATTGTGCTGCA +
Preference number: 4 (lower is better)
Translates to: RSGICSSVCKQMILLLDTGCSGG*CLHCAA
Trigger: TGCAGCACAATGCAGACACCAACCACCGCTGCAACC...TGTGTCAAGGAGAAGAATCATTTGTTTACAAACTGATGAGCAGATCCCAGACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CCA 90 bp AGGTCTGGGATCTGCTCATCAGTTTGTAAACAAATGATTCTTCTCCTTGACACATGTAGTTGCCCTTCTTaGAGGCGATGTGCAGCGGGA +
Preference number: 4 (lower is better)
Translates to: RSGICSSVCKQMILLLDTCSCPS*RRCAAG
Trigger: TCCCGCTGCACATCGCCTCCAAGAAGGGCAACTACA...TGTGTCAAGGAGAAGAATCATTTGTTTACAAACTGATGAGCAGATCCCAGACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CCA 90 bp AGGTCTGGGATCTGCTCATCAGTTTGTAAACAAATGATTCTTCTCCTTGACACAGAGGTGCAGTGGACCTaGTCCATGGGTAGAAATGGG +
Preference number: 4 (lower is better)
Translates to: RSGICSSVCKQMILLLDTEVQWT*SMGRNG
Trigger: CCCATTTCTACCCATGGACCAGGTCCACTGCACCTC...TGTGTCAAGGAGAAGAATCATTTGTTTACAAACTGATGAGCAGATCCCAGACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555019.6
ENST00000612647.3
CDS-3UTR CCA 90 bp AGGTCTGGGATCTGCTCATCAGTTTGTAAACAAATGATTCTTCTCCTTGACACATCTCAGGAGGTGCAGTaGACCTGGTCCATGGGTAGA +
Preference number: 4 (lower is better)
Translates to: RSGICSSVCKQMILLLDTSQEVQ*TWSMGR
Trigger: TCTACCCATGGACCAGGTCCACTGCACCTCCTGAGA...TGTGTCAAGGAGAAGAATCATTTGTTTACAAACTGATGAGCAGATCCCAGACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555019.6
ENST00000612647.3
CDS-3UTR TCA 90 bp AGGTCTGGGATCTGCTCATCAGTTTGTAAACAAATGATTCTTCTCCTTGACACAATAGGGGAGCAAAGCTaGGAAGCCAAGCTGTACCTG +
Preference number: 4 (lower is better)
Translates to: RSGICSSVCKQMILLLDTIGEQS*EAKLYL
Trigger: CAGGTACAGCTTGGCTTCTCAGCTTTGCTCCCCTAT...TGTGTCAAGGAGAAGAATCATTTGTTTACAAACTGATGAGCAGATCCCAGACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315988.8
ENST00000629617.2
CDS-3UTR TCA 90 bp AGGTCTGGGATCTGCTCATCAGTTTGTAAACAAATGATTCTTCTCCTTGACACACCAGCTGGGAGGTCTTaGACAAGCTGCTGCTGTATT +
Preference number: 4 (lower is better)
Translates to: RSGICSSVCKQMILLLDTPAGRS*TSCCCI
Trigger: AATACAGCAGCAGCTTGTTCAAGACCTCCCAGCTGG...TGTGTCAAGGAGAAGAATCATTTGTTTACAAACTGATGAGCAGATCCCAGACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR GCA 90 bp AGGTCTGGGATCTGCTCATCAGTTTGTAAACAAATGATTCTTCTCCTTGACACAGCGGTGGTTGGTGTCTaGATTGTGCTGCACCAGAAT +
Preference number: 4 (lower is better)
Translates to: RSGICSSVCKQMILLLDTAVVGV*IVLHQN
Trigger: ATTCTGGTGCAGCACAATGCAGACACCAACCACCGC...TGTGTCAAGGAGAAGAATCATTTGTTTACAAACTGATGAGCAGATCCCAGACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CCA 90 bp TTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGAAAGCTCTGAAGTCAAGTGGTAAGGTAGAGAAGGTCTaGGATCTGCTCATCAGTTTG +
Preference number: 4 (lower is better)
Translates to: LGHVFILVFGEKALKSSGKVEKV*DLLISL
Trigger: CAAACTGATGAGCAGATCCCAGACCTTCTCTACCTT...ACCACTTGACTTCAGAGCTTTCTCTCCAAAGACTAAGATGAAGACGTGGCCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CCA 90 bp AGGTCTGGGATCTGCTCATCAGTTTGTAAACAAATGATTCTTCTCCTTGACACACTAGGCTCTGCTCGATaGCCATCTGCACCAGTTCAT +
Preference number: 4 (lower is better)
Translates to: RSGICSSVCKQMILLLDTLGSAR*PSAPVH
Trigger: ATGAACTGGTGCAGATGGCCATCGAGCAGAGCCTAG...TGTGTCAAGGAGAAGAATCATTTGTTTACAAACTGATGAGCAGATCCCAGACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555019.6
ENST00000612647.3
CDS-3UTR CCA 90 bp AGGTCTGGGATCTGCTCATCAGTTTGTAAACAAATGATTCTTCTCCTTGACACAAGTGGACCTGGTCCATaGGTAGAAATGGGCAGGTTG +
Preference number: 4 (lower is better)
Translates to: RSGICSSVCKQMILLLDTSGPGP*VEMGRL
Trigger: CAACCTGCCCATTTCTACCCATGGACCAGGTCCACT...TGTGTCAAGGAGAAGAATCATTTGTTTACAAACTGATGAGCAGATCCCAGACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555019.6
ENST00000612647.3
CDS-3UTR TCA 90 bp AGGTCTGGGATCTGCTCATCAGTTTGTAAACAAATGATTCTTCTCCTTGACACAGGTGCAGAGCAGGAGTaGAAGAGGGAAAAGTACTCT +
Preference number: 4 (lower is better)
Translates to: RSGICSSVCKQMILLLDTGAEQE*KREKYS
Trigger: AGAGTACTTTTCCCTCTTTCACTCCTGCTCTGCACC...TGTGTCAAGGAGAAGAATCATTTGTTTACAAACTGATGAGCAGATCCCAGACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315988.8
ENST00000629617.2
CDS-3UTR TCA 90 bp AGGTCTGGGATCTGCTCATCAGTTTGTAAACAAATGATTCTTCTCCTTGACACACTTCATCGCCATCCTTaGTGGCCTTTATCAAGGGGT +
Preference number: 4 (lower is better)
Translates to: RSGICSSVCKQMILLLDTLHRHP*WPLSRG
Trigger: ACCCCTTGATAAAGGCCATCAAGGATGGCGATGAAG...TGTGTCAAGGAGAAGAATCATTTGTTTACAAACTGATGAGCAGATCCCAGACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR TCA 90 bp AGGTCTGGGATCTGCTCATCAGTTTGTAAACAAATGATTCTTCTCCTTGACACAGGAACACCGACGTCCTaGGACTTAGTAAGAAGAGTC +
Preference number: 4 (lower is better)
Translates to: RSGICSSVCKQMILLLDTGTPTS*DLVRRV
Trigger: GACTCTTCTTACTAAGTCTCAGGACGTCGGTGTTCC...TGTGTCAAGGAGAAGAATCATTTGTTTACAAACTGATGAGCAGATCCCAGACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR GCA 90 bp AGGTCTGGGATCTGCTCATCAGTTTGTAAACAAATGATTCTTCTCCTTGACACACTCCTTGTTGGGCTCTaGGAGATTCTTCCCTTCCTT +
Preference number: 4 (lower is better)
Translates to: RSGICSSVCKQMILLLDTLLVGL*EILPFL
Trigger: AAGGAAGGGAAGAATCTCGCAGAGCCCAACAAGGAG...TGTGTCAAGGAGAAGAATCATTTGTTTACAAACTGATGAGCAGATCCCAGACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CCA 90 bp AGGTCTGGGATCTGCTCATCAGTTTGTAAACAAATGATTCTTCTCCTTGACACATGTCAGCACCGTACTTaGCTAAGAACCTCAAGGCCT +
Preference number: 4 (lower is better)
Translates to: RSGICSSVCKQMILLLDTCQHRT*LRTSRP
Trigger: AGGCCTTGAGGTTCTTAGCCAAGTACGGTGCTGACA...TGTGTCAAGGAGAAGAATCATTTGTTTACAAACTGATGAGCAGATCCCAGACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR GCA 90 bp TTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGAAAGCTCTGAAGTCAAGTGGTAGAAGGTCTGGGATCTaGTCATCAGTTTGTAAACAA +
Preference number: 4 (lower is better)
Translates to: LGHVFILVFGEKALKSSGRRSGI*SSVCKQ
Trigger: TTGTTTACAAACTGATGAGCAGATCCCAGACCTTCT...ACCACTTGACTTCAGAGCTTTCTCTCCAAAGACTAAGATGAAGACGTGGCCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CCA 90 bp AGGTCTGGGATCTGCTCATCAGTTTGTAAACAAATGATTCTTCTCCTTGACACAATTATTTTTGGCCCTTaGAGGAAGCCCTGGGAGATT +
Preference number: 4 (lower is better)
Translates to: RSGICSSVCKQMILLLDTIIFGP*RKPWEI
Trigger: AATCTCCCAGGGCTTCCTCCAAGGGCCAAAAATAAT...TGTGTCAAGGAGAAGAATCATTTGTTTACAAACTGATGAGCAGATCCCAGACCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315988.8
ENST00000629617.2
CDS-3UTR CCA 90 bp AGGTCTGGGATCTGCTCATCAGTTTGTAAACAAATGATTCTTCTCCTTGACACAAAGGTAGAGAAGGTCTaGGATCTGCTCATCAGTTTG +
Preference number: 4 (lower is better)
Translates to: RSGICSSVCKQMILLLDTKVEKV*DLLISL
Trigger: CAAACTGATGAGCAGATCCCAGACCTTCTCTACCTT...TGTGTCAAGGAGAAGAATCATTTGTTTACAAACTGATGAGCAGATCCCAGACCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR GCA 90 bp AGGTCTGGGATCTGCTCATCAGTTTGTAAACAAATGATTCTTCTCCTTGACACAAGAAGGTCTGGGATCTaGTCATCAGTTTGTAAACAA +
Preference number: 4 (lower is better)
Translates to: RSGICSSVCKQMILLLDTRRSGI*SSVCKQ
Trigger: TTGTTTACAAACTGATGAGCAGATCCCAGACCTTCT...TGTGTCAAGGAGAAGAATCATTTGTTTACAAACTGATGAGCAGATCCCAGACCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS GCA 90 bp CCGCTACGGCGTATGCGCGTGCGGCTGGTCACCGGCAGCAGCATCTaGACGATCCTGCCGGGTCGAGGGGCGGGCGCGGGTGAGGGGAGG +
Preference number: 5 (lower is better)
Translates to: PLRRMRVRLVTGSSI*TILPGRGAGAGEGR
Trigger: CCTCCCCTCACCCGCGCCCGCCCCTCGACCCGGCAGGATCGTGCAGATGCTGCTGCCGGTGACCAGCCGCACGCGCATACGCCGTAGCGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553883.1
ENST00000625368.1
CDS TCA 90 bp CCAGCACCTCGTCGTGGTTGCGCTCGGCCGCCAGGTGCAGCGGACTaGCGCCGCTACGGCGTATGCGCGTGCGGCTGGTCACCGGCAGCA +
Preference number: 5 (lower is better)
Translates to: PAPRRGCARPPGAAD*RRYGVCACGWSPAA
Trigger: TGCTGCCGGTGACCAGCCGCACGCGCATACGCCGTAGCGGCGTCAGTCCGCTGCACCTGGCGGCCGAGCGCAACCACGACGAGGTGCTGG
72% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000315988.8
ENST00000553883.1
ENST00000555019.6
ENST00000555507.5
ENST00000612647.3
ENST00000625368.1
ENST00000626296.2
ENST00000629617.2
CDS GCA 90 bp AGCAGCGCCTCCAGCACCTCGTCGTGGTTGCGCTCGGCCGCCAGGTaGAGCGGACTGACGCCGCTACGGCGTATGCGCGTGCGGCTGGTC +
Preference number: 5 (lower is better)
Translates to: SSASSTSSWLRSAAR*SGLTPLRRMRVRLV
Trigger: GACCAGCCGCACGCGCATACGCCGTAGCGGCGTCAGTCCGCTGCACCTGGCGGCCGAGCGCAACCACGACGAGGTGCTGGAGGCGCTGCT
72% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000315988.8
ENST00000553883.1
ENST00000555019.6
ENST00000555507.5
ENST00000612647.3
ENST00000625368.1
ENST00000626296.2
ENST00000629617.2
CDS CCA 90 bp TTCACGTCGAAGCGCGCGCTCAGCAGCGCCTCCAGCACCTCGTCGTaGTTGCGCTCGGCCGCCAGGTGCAGCGGACTGACGCCGCTACGG +
Preference number: 5 (lower is better)
Translates to: FTSKRALSSASSTSS*LRSAARCSGLTPLR
Trigger: CCGTAGCGGCGTCAGTCCGCTGCACCTGGCGGCCGAGCGCAACCACGACGAGGTGCTGGAGGCGCTGCTGAGCGCGCGCTTCGACGTGAA
71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000315988.8
ENST00000553883.1
ENST00000555019.6
ENST00000555507.5
ENST00000612647.3
ENST00000625368.1
ENST00000626296.2
ENST00000629617.2
CDS CCA 90 bp TTCGCGCCGTGGTCCAGCAGCAGCTGCATTGTGCGCAGGCAGCCGTaGCGGATGGCCACGAGCAAGGGGCTGATGACGTCGCGGTTGGGG +
Preference number: 5 (lower is better)
Translates to: FAPWSSSSCIVRRQP*RMATSKGLMTSRLG
Trigger: CCCCAACCGCGACGTCATCAGCCCCTTGCTCGTGGCCATCCGCCACGGCTGCCTGCGCACAATGCAGCTGCTGCTGGACCACGGCGCGAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000315988.8
ENST00000553883.1
ENST00000555019.6
ENST00000555507.5
ENST00000612647.3
ENST00000625368.1
ENST00000626296.2
ENST00000629617.2
CDS GCA 90 bp GCAGGCTCGCTGCAGGACTTTCAGGCAGCCCACCTGGCCATAGTATaGGGCCTCGTGCAGCGGCAGCCAGCCCTCCTTGTTGGGCTCTGC +
Preference number: 5 (lower is better)
Translates to: AGSLQDFQAAHLAIV*GLVQRQPALLVGLC
Trigger: GCAGAGCCCAACAAGGAGGGCTGGCTGCCGCTGCACGAGGCCGCATACTATGGCCAGGTGGGCTGCCTGAAAGTCCTGCAGCGAGCCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556062.5
ENST00000626017.2
CDS CCA 90 bp GTGAGGCTGGAGGCAGGCCTCATTCCCAGGACACCCACGCCATGTTaGGCTAGGATGGGCTCTGGGCGGTCTCTGCCACCAGCCCCTGCA +
Preference number: 5 (lower is better)
Translates to: VRLEAGLIPRTPTPC*ARMGSGRSLPPAPA
Trigger: TGCAGGGGCTGGTGGCAGAGACCGCCCAGAGCCCATCCTAGCCCAACATGGCGTGGGTGTCCTGGGAATGAGGCCTGCCTCCAGCCTCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555507.5
ENST00000626296.2
CDS-3UTR CAA 90 bp CCCAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAACCACGCTGGGCTCCTaGTCGGCCGCGGGCGCGTCG +
Preference number: 5 (lower is better)
Translates to: PRLPLPPTLGHVFILVFGTTLGS*SAAGAS
Trigger: CGACGCGCCCGCGGCCGACAAGGAGCCCAGCGTGGT...TCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS GCA 90 bp GTACGCTCGCTGCAGGACTTTCAGGCAGCCCACCTGGCCATAGTATaGGGCCTCGTGCAGCGGCAGCCAGCCCTCCTTGTTGGGCTCTGC +
Preference number: 5 (lower is better)
Translates to: VRSLQDFQAAHLAIV*GLVQRQPALLVGLC
Trigger: GCAGAGCCCAACAAGGAGGGCTGGCTGCCGCTGCACGAGGCCGCATACTATGGCCAGGTGGGCTGCCTGAAAGTCCTGCAGCGAGCGTAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000555287.1
ENST00000555507.5
ENST00000612647.3
ENST00000626296.2
ENST00000628500.1
ENST00000629617.2
CDS GCA 90 bp ACGAGCAAGGGGCTGATGACGTCGCGGTTGGGGTCGGCGCCGTGTTaGAGCAGCAGCTCGGTGGCGTACACGTTGTTGTTGACCACCGCG +
Preference number: 5 (lower is better)
Translates to: TSKGLMTSRLGSAPC*SSSSVAYTLLLTTA
Trigger: CGCGGTGGTCAACAACAACGTGTACGCCACCGAGCTGCTGCTGCAACACGGCGCCGACCCCAACCGCGACGTCATCAGCCCCTTGCTCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000315988.8
ENST00000553883.1
ENST00000555019.6
ENST00000555507.5
ENST00000556337.1
ENST00000612647.3
ENST00000625368.1
ENST00000626296.2
ENST00000626794.1
ENST00000629617.2
CDS GCA 90 bp CTCACCTCGCTGCAGGACTTTCAGGCAGCCCACCTGGCCATAGTATaGGGCCTCGTGCAGCGGCAGCCAGCCCTCCTTGTTGGGCTCTGC +
Preference number: 5 (lower is better)
Translates to: LTSLQDFQAAHLAIV*GLVQRQPALLVGLC
Trigger: GCAGAGCCCAACAAGGAGGGCTGGCTGCCGCTGCACGAGGCCGCATACTATGGCCAGGTGGGCTGCCTGAAAGTCCTGCAGCGAGGTGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556793.1
ENST00000628228.1
CDS CCA 90 bp ATCCCACCGGCAGGGGGCGCCGCGGGTCAACCATTCTCACCCCACTaGGCAGGGTGGGTCGGCTGCCGTCTCCGCTTTACAGATAAGGAA +
Preference number: 5 (lower is better)
Translates to: IPPAGGAAGQPFSPH*AGWVGCRLRFTDKE
Trigger: TTCCTTATCTGTAAAGCGGAGACGGCAGCCGACCCACCCTGCCCAGTGGGGTGAGAATGGTTGACCCGCGGCGCCCCCTGCCGGTGGGAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553883.1
ENST00000625368.1
CDS-3UTR CAA 90 bp CCCAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGCCGCGGGCGCGTCGTaGAACCTGCTGGAGGGCTGC +
Preference number: 5 (lower is better)
Translates to: PRLPLPPTLGHVFILVFGAAGAS*NLLEGC
Trigger: GCAGCCCTCCAGCAGGTTCAACGACGCGCCCGCGGC...TCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CAA 90 bp CAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGAACCACGCTGGGCTCCTaGTCGGCCGCGGGCGCGTCG +
Preference number: 5 (lower is better)
Translates to: QAPPTPYLGPRLHLSLWRTTLGS*SAAGAS
Trigger: CGACGCGCCCGCGGCCGACAAGGAGCCCAGCGTGGT...TCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS TCA 90 bp TTCTTCACCCAGGAGGATGTGAGCCGTGGTCGGCAGGTCCCAGGATaGAAGGGGCTCAGGCTCACTGCTGGCCAGGCAGATCCCTGCGGG +
Preference number: 5 (lower is better)
Translates to: FFTQEDVSRGRQVPG*KGLRLTAGQADPCG
Trigger: CCCGCAGGGATCTGCCTGGCCAGCAGTGAGCCTGAGCCCCTTTCATCCTGGGACCTGCCGACCACGGCTCACATCCTCCTGGGTGAAGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315988.8
ENST00000629617.2
CDS TCA 90 bp CGGCGCCGTGTTGCAGCAGCAGCTCGGTGGCGTACACGTTGTTGTTaGCCACCGCGAAGTACAGCGCGGAGCTGCGCCGGTCTTCGTAGA +
Preference number: 5 (lower is better)
Translates to: RRRVAAAARWRTRCC*PPRSTARSCAGLRR
Trigger: TCTACGAAGACCGGCGCAGCTCCGCGCTGTACTTCGCGGTGGTCAACAACAACGTGTACGCCACCGAGCTGCTGCTGCAACACGGCGCCG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000315988.8
ENST00000553883.1
ENST00000555019.6
ENST00000555507.5
ENST00000556337.1
ENST00000612647.3
ENST00000625368.1
ENST00000626296.2
ENST00000626794.1
ENST00000629617.2
CDS TCA 90 bp GCGAGCAGAGCTGCACGTTGCCCACGTAGTCCAGGAGGACATCGATaGTGGGCCCCGCCCAGCGGCTCACCTCTGGGGCAGATACGAACT +
Preference number: 5 (lower is better)
Translates to: ASRAARCPRSPGGHR*WAPPSGSPLGQIRT
Trigger: AGTTCGTATCTGCCCCAGAGGTGAGCCGCTGGGCGGGGCCCATCATCGATGTCCTCCTGGACTACGTGGGCAACGTGCAGCTCTGCTCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000315988.8
ENST00000553883.1
ENST00000555019.6
ENST00000555507.5
ENST00000612647.3
ENST00000625368.1
ENST00000626296.2
ENST00000629617.2
CDS TCA 90 bp GGCTGTACTCCTCCTGCCCAATGGTACACTGGCTGCCCCGAGTGCTaGTCTGCGTGGCCATCCTCCTCCACCTCTCACCCTGGCCTCCAG +
Preference number: 5 (lower is better)
Translates to: GCTPPAQWYTGCPEC*SAWPSSSTSHPGLQ
Trigger: CTGGAGGCCAGGGTGAGAGGTGGAGGAGGATGGCCACGCAGATCAGCACTCGGGGCAGCCAGTGTACCATTGGGCAGGAGGAGTACAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000555019.6
ENST00000557613.1
ENST00000612647.3
ENST00000625949.1
CDS GCA 90 bp GAGCCGTGGTCGGCAGGTCCCAGGATGAAAGGGGCTCAGGCTCACTaGTGGCCAGGCAGATCCCTGCGGGGCTGGATGAGAGATTCATGG +
Preference number: 5 (lower is better)
Translates to: EPWSAGPRMKGAQAH*WPGRSLRGWMRDSW
Trigger: CCATGAATCTCTCATCCAGCCCCGCAGGGATCTGCCTGGCCAGCAGTGAGCCTGAGCCCCTTTCATCCTGGGACCTGCCGACCACGGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315988.8
ENST00000629617.2
CDS CCA 90 bp GGGCAGGTTGGCGGTTGGTACATGCAGACGCGGTGGCCTCAGCAGTaGTTGGGCCCCTTGTCTTGTCCGCTAGGCTCTGCTCGATGGCCA +
Preference number: 5 (lower is better)
Translates to: GQVGGWYMQTRWPQQ*LGPLSCPLGSARWP
Trigger: TGGCCATCGAGCAGAGCCTAGCGGACAAGACAAGGGGCCCAACCACTGCTGAGGCCACCGCGTCTGCATGTACCAACCGCCAACCTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000555019.6
ENST00000557613.1
ENST00000612647.3
ENST00000625949.1
CDS CCA 90 bp GGTCCGCAGGCCTGGTCCATGGGTAGAAATGGGCAGGTTGGCGGTTaGTACATGCAGACGCGGTGGCCTCAGCAGTGGTTGGGCCCCTTG +
Preference number: 5 (lower is better)
Translates to: GPQAWSMGRNGQVGG*YMQTRWPQQWLGPL
Trigger: CAAGGGGCCCAACCACTGCTGAGGCCACCGCGTCTGCATGTACCAACCGCCAACCTGCCCATTTCTACCCATGGACCAGGCCTGCGGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557613.1
ENST00000625949.1
CDS-3UTR CAA 90 bp CCCAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAAGCACCTCGTCGTGGTaGCGCTCGGCCGCCAGGTGC +
Preference number: 5 (lower is better)
Translates to: PRLPLPPTLGHVFILVFGSTSSW*RSAARC
Trigger: GCACCTGGCGGCCGAGCGCAACCACGACGAGGTGCT...TCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CAA 90 bp CGTCTGTCACCAGGTCCCCTTGGAGTTGGGAACACCGACGTCCTGAGACTTAGTGCCGCGGGCGCGTCGTaGAACCTGCTGGAGGGCTGC +
Preference number: 5 (lower is better)
Translates to: RLSPGPLGVGNTDVLRLSAAGAS*NLLEGC
Trigger: GCAGCCCTCCAGCAGGTTCAACGACGCGCCCGCGGC...ACTAAGTCTCAGGACGTCGGTGTTCCCAACTCCAAGGGGACCTGGTGACAGACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS GCA 90 bp AGAGCGGTCCAGCCGCGGTTGCAGCGGTGGTTGGTGTCTGCATTGTaGTGCACCAGAATCTTCACGGCCTCCGCGTTCTTGCGCTCGCAG +
Preference number: 5 (lower is better)
Translates to: RAVQPRLQRWLVSAL*CTRIFTASAFLRSQ
Trigger: CTGCGAGCGCAAGAACGCGGAGGCCGTGAAGATTCTGGTGCAGCACAATGCAGACACCAACCACCGCTGCAACCGCGGCTGGACCGCTCT
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000555507.5
ENST00000556062.5
ENST00000612647.3
ENST00000626017.2
ENST00000626296.2
ENST00000629617.2
CDS GCA 90 bp CTCGTGCAGAGCGGTCCAGCCGCGGTTGCAGCGGTGGTTGGTGTCTaGATTGTGCTGCACCAGAATCTTCACGGCCTCCGCGTTCTTGCG +
Preference number: 5 (lower is better)
Translates to: LVQSGPAAVAAVVGV*IVLHQNLHGLRVLA
Trigger: CGCAAGAACGCGGAGGCCGTGAAGATTCTGGTGCAGCACAATGCAGACACCAACCACCGCTGCAACCGCGGCTGGACCGCTCTGCACGAG
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000555507.5
ENST00000556062.5
ENST00000612647.3
ENST00000626017.2
ENST00000626296.2
ENST00000629617.2
CDS CCA 90 bp CCGTGGTCGGCAGGTCCCAGGATGAAAGGGGCTCAGGCTCACTGCTaGCCAGGCAGATCCCTGCGGGGCTGGATGAGAGATTCATGGCAA +
Preference number: 5 (lower is better)
Translates to: PWSAGPRMKGAQAHC*PGRSLRGWMRDSWQ
Trigger: TTGCCATGAATCTCTCATCCAGCCCCGCAGGGATCTGCCTGGCCAGCAGTGAGCCTGAGCCCCTTTCATCCTGGGACCTGCCGACCACGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315988.8
ENST00000629617.2
CDS CCA 90 bp GTCCAGGAGGACATCGATGATGGGCCCCGCCCAGCGGCTCACCTCTaGGGCAGATACGAACTCACAGAACTGCACCACGCTGGGCTCCTT +
Preference number: 5 (lower is better)
Translates to: VQEDIDDGPRPAAHL*GRYELTELHHAGLL
Trigger: AAGGAGCCCAGCGTGGTGCAGTTCTGTGAGTTCGTATCTGCCCCAGAGGTGAGCCGCTGGGCGGGGCCCATCATCGATGTCCTCCTGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000315988.8
ENST00000553883.1
ENST00000555019.6
ENST00000555507.5
ENST00000612647.3
ENST00000625368.1
ENST00000626296.2
ENST00000629617.2
CDS CCA 90 bp CCAACCTCCTCCCTGCAGGAGGCAGTAGAGCCTAGTGGCGAAGTTTaGAGCCAGACCCTGCTCTCTCTGGGGGAGGACGGACAGGGACAG +
Preference number: 5 (lower is better)
Translates to: PTSSLQEAVEPSGEV*SQTLLSLGEDGQGQ
Trigger: CTGTCCCTGTCCGTCCTCCCCCAGAGAGAGCAGGGTCTGGCTCCAAACTTCGCCACTAGGCTCTACTGCCTCCTGCAGGGAGGAGGTTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000553883.1
ENST00000625368.1
CDS CCA 90 bp GCAGGGGGCGCCGCGGGTCAACCATTCTCACCCCACTGGGCAGGGTaGGTCGGCTGCCGTCTCCGCTTTACAGATAAGGAAACTGAAGCT +
Preference number: 5 (lower is better)
Translates to: AGGAAGQPFSPHWAG*VGCRLRFTDKETEA
Trigger: AGCTTCAGTTTCCTTATCTGTAAAGCGGAGACGGCAGCCGACCCACCCTGCCCAGTGGGGTGAGAATGGTTGACCCGCGGCGCCCCCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553883.1
ENST00000625368.1
CDS-3UTR CAA 90 bp CCCAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGACTGATGACGTCGCGGTaGGGGTCGGCGCCGTGTTGC +
Preference number: 5 (lower is better)
Translates to: PRLPLPPTLGHVFILVFGLMTSR*GSAPCC
Trigger: GCAACACGGCGCCGACCCCAACCGCGACGTCATCAG...TCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS GCA 90 bp GCAGGCGCCAGCTGGGAGGTCTTGAACAAGCTGCTGCTGTATTTCTaGATGACCCCTTGGAACAAGCCCATTGGGGCCCGGGCCGGCGAA +
Preference number: 5 (lower is better)
Translates to: AGASWEVLNKLLLYF*MTPWNKPIGARAGE
Trigger: TTCGCCGGCCCGGGCCCCAATGGGCTTGTTCCAAGGGGTCATGCAGAAATACAGCAGCAGCTTGTTCAAGACCTCCCAGCTGGCGCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000555287.1
ENST00000556793.1
ENST00000612647.3
ENST00000628228.1
ENST00000628500.1
ENST00000629617.2
CDS GCA 90 bp GGCCCCTGCACGTTGCCAAGTAAACGGCTGTTTCCTCCTGCAGGGTaGGCTGGTCGATGGTCCCTGGGTACGCTCGCTGCAGGACTTTCA +
Preference number: 5 (lower is better)
Translates to: GPCTLPSKRLFPPAG*AGRWSLGTLAAGLS
Trigger: TGAAAGTCCTGCAGCGAGCGTACCCAGGGACCATCGACCAGCGCACCCTGCAGGAGGAAACAGCCGTTTACTTGGCAACGTGCAGGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000555287.1
ENST00000555507.5
ENST00000612647.3
ENST00000626296.2
ENST00000628500.1
ENST00000629617.2
CDS GCA 90 bp CTGCCCCTGCTTGGAGCAGTGACAGGAGACAGTCCAGGTGGCCCCTaGACGTTGCCAAGTAAACGGCTGTTTCCTCCTGCAGGGTGCGCT +
Preference number: 5 (lower is better)
Translates to: LPLLGAVTGDSPGGP*TLPSKRLFPPAGCA
Trigger: AGCGCACCCTGCAGGAGGAAACAGCCGTTTACTTGGCAACGTGCAGGGGCCACCTGGACTGTCTCCTGTCACTGCTCCAAGCAGGGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000555507.5
ENST00000612647.3
ENST00000626296.2
ENST00000629617.2
CDS GCA 90 bp TACTCCTCCTGCCCAATGGTACACTGGCTGCCCCGAGTGCTGATCTaGGTGGCCATCCTCCTCCACCTCTCACCCTGGCCTCCAGAACAG +
Preference number: 5 (lower is better)
Translates to: YSSCPMVHWLPRVLI*VAILLHLSPWPPEQ
Trigger: CTGTTCTGGAGGCCAGGGTGAGAGGTGGAGGAGGATGGCCACGCAGATCAGCACTCGGGGCAGCCAGTGTACCATTGGGCAGGAGGAGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000555019.6
ENST00000557613.1
ENST00000612647.3
ENST00000625949.1
CDS GCA 90 bp GTGGCCTCAGCAGTGGTTGGGCCCCTTGTCTTGTCCGCTAGGCTCTaGTCGATGGCCATCTGCACCAGTTCATCCTCGCTCAGGCTGCTG +
Preference number: 5 (lower is better)
Translates to: VASAVVGPLVLSARL*SMAICTSSSSLRLL
Trigger: CAGCAGCCTGAGCGAGGATGAACTGGTGCAGATGGCCATCGAGCAGAGCCTAGCGGACAAGACAAGGGGCCCAACCACTGCTGAGGCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000555019.6
ENST00000557613.1
ENST00000612647.3
ENST00000625949.1
CDS CCA 90 bp ACACAGACTCGTGCAGAGCGGTCCAGCCGCGGTTGCAGCGGTGGTTaGTGTCTGCATTGTGCTGCACCAGAATCTTCACGGCCTCCGCGT +
Preference number: 5 (lower is better)
Translates to: TQTRAERSSRGCSGG*CLHCAAPESSRPPR
Trigger: ACGCGGAGGCCGTGAAGATTCTGGTGCAGCACAATGCAGACACCAACCACCGCTGCAACCGCGGCTGGACCGCTCTGCACGAGTCTGTGT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000555507.5
ENST00000556062.5
ENST00000612647.3
ENST00000626017.2
ENST00000626296.2
ENST00000629617.2
CDS CCA 90 bp CGAGACACAGACTCGTGCAGAGCGGTCCAGCCGCGGTTGCAGCGGTaGTTGGTGTCTGCATTGTGCTGCACCAGAATCTTCACGGCCTCC +
Preference number: 5 (lower is better)
Translates to: RDTDSCRAVQPRLQR*LVSALCCTRIFTAS
Trigger: GGAGGCCGTGAAGATTCTGGTGCAGCACAATGCAGACACCAACCACCGCTGCAACCGCGGCTGGACCGCTCTGCACGAGTCTGTGTCTCG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000555507.5
ENST00000556062.5
ENST00000612647.3
ENST00000626017.2
ENST00000626296.2
ENST00000629617.2
CDS CCA 90 bp CCCCGAGTGCTGATCTGCGTGGCCATCCTCCTCCACCTCTCACCCTaGCCTCCAGAACAGACACCCAGTGGGGAGGAGGGAACAGCAAAT +
Preference number: 5 (lower is better)
Translates to: PRVLICVAILLHLSP*PPEQTPSGEEGTAN
Trigger: ATTTGCTGTTCCCTCCTCCCCACTGGGTGTCTGTTCTGGAGGCCAGGGTGAGAGGTGGAGGAGGATGGCCACGCAGATCAGCACTCGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000555019.6
ENST00000557613.1
ENST00000612647.3
ENST00000625949.1
CDS CCA 90 bp CTCAGGCTGCTGTACAGGCTGTACTCCTCCTGCCCAATGGTACACTaGCTGCCCCGAGTGCTGATCTGCGTGGCCATCCTCCTCCACCTC +
Preference number: 5 (lower is better)
Translates to: LRLLYRLYSSCPMVH*LPRVLICVAILLHL
Trigger: GAGGTGGAGGAGGATGGCCACGCAGATCAGCACTCGGGGCAGCCAGTGTACCATTGGGCAGGAGGAGTACAGCCTGTACAGCAGCCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000555019.6
ENST00000557613.1
ENST00000612647.3
ENST00000625949.1
CDS CCA 90 bp GTGCAGTGGACCTGGTCCATGGGTAGAAATGGGCAGGTTGGCGGTTaGTACATGCAGACGCGGTGGCCTCAGCAGTGGTTGGGCCCCTTG +
Preference number: 5 (lower is better)
Translates to: VQWTWSMGRNGQVGG*YMQTRWPQQWLGPL
Trigger: CAAGGGGCCCAACCACTGCTGAGGCCACCGCGTCTGCATGTACCAACCGCCAACCTGCCCATTTCTACCCATGGACCAGGTCCACTGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555019.6
ENST00000612647.3
CDS TCA 90 bp TCAAGGCCTCCAACTGTCCACTCTGGGCGGCCACGAACAAGGGGGTaGTGCCGTAGGCGTTCTTGGATTCCACCTTGGCTCCTCCGCTCA +
Preference number: 5 (lower is better)
Translates to: SRPPTVHSGRPRTRG*CRRRSWIPPWLLRS
Trigger: TGAGCGGAGGAGCCAAGGTGGAATCCAAGAACGCCTACGGCATCACCCCCTTGTTCGTGGCCGCCCAGAGTGGACAGTTGGAGGCCTTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000555507.5
ENST00000556062.5
ENST00000612647.3
ENST00000626017.2
ENST00000626296.2
ENST00000629617.2
CDS GCA 90 bp TTGGAACAAGCCCATTGGGGCCCGGGCCGGCGAACTCTCAGGAGGTaGAGTGGACCTGGAGGGTGCAGAGCAGGAGTGAAAGAGGGAAAA +
Preference number: 5 (lower is better)
Translates to: LEQAHWGPGRRTLRR*SGPGGCRAGVKEGK
Trigger: TTTTCCCTCTTTCACTCCTGCTCTGCACCCTCCAGGTCCACTGCACCTCCTGAGAGTTCGCCGGCCCGGGCCCCAATGGGCTTGTTCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000556793.1
ENST00000628228.1
ENST00000629617.2
CDS GCA 90 bp ACCAGGATCTGCATGACCTCCAGGTCATTGCGAGACACAGACTCGTaGAGAGCGGTCCAGCCGCGGTTGCAGCGGTGGTTGGTGTCTGCA +
Preference number: 5 (lower is better)
Translates to: TRICMTSRSLRDTDS*RAVQPRLQRWLVSA
Trigger: TGCAGACACCAACCACCGCTGCAACCGCGGCTGGACCGCTCTGCACGAGTCTGTGTCTCGCAATGACCTGGAGGTCATGCAGATCCTGGT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000555507.5
ENST00000556062.5
ENST00000612647.3
ENST00000626017.2
ENST00000626296.2
ENST00000629617.2
CDS GCA 90 bp ACCAGTTCATCCTCGCTCAGGCTGCTGTACAGGCTGTACTCCTCCTaGCCAATGGTACACTGGCTGCCCCGAGTGCTGATCTGCGTGGCC +
Preference number: 5 (lower is better)
Translates to: TSSSSLRLLYRLYSS*PMVHWLPRVLICVA
Trigger: GGCCACGCAGATCAGCACTCGGGGCAGCCAGTGTACCATTGGGCAGGAGGAGTACAGCCTGTACAGCAGCCTGAGCGAGGATGAACTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000555019.6
ENST00000557613.1
ENST00000612647.3
ENST00000625949.1
CDS GCA 90 bp AGGCCTGGTCCATGGGTAGAAATGGGCAGGTTGGCGGTTGGTACATaGAGACGCGGTGGCCTCAGCAGTGGTTGGGCCCCTTGTCTTGTC +
Preference number: 5 (lower is better)
Translates to: RPGPWVEMGRLAVGT*RRGGLSSGWAPCLV
Trigger: GACAAGACAAGGGGCCCAACCACTGCTGAGGCCACCGCGTCTGCATGTACCAACCGCCAACCTGCCCATTTCTACCCATGGACCAGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557613.1
ENST00000625949.1
CDS GCA 90 bp GGACCTGGTCCATGGGTAGAAATGGGCAGGTTGGCGGTTGGTACATaGAGACGCGGTGGCCTCAGCAGTGGTTGGGCCCCTTGTCTTGTC +
Preference number: 5 (lower is better)
Translates to: GPGPWVEMGRLAVGT*RRGGLSSGWAPCLV
Trigger: GACAAGACAAGGGGCCCAACCACTGCTGAGGCCACCGCGTCTGCATGTACCAACCGCCAACCTGCCCATTTCTACCCATGGACCAGGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555019.6
ENST00000612647.3
CDS CCA 90 bp CCATTGGGGCCCGGGCCGGCGAACTCTCAGGAGGTGCAGTGGACCTaGAGGGTGCAGAGCAGGAGTGAAAGAGGGAAAAGTACTCTGCAT +
Preference number: 5 (lower is better)
Translates to: PLGPGPANSQEVQWT*RVQSRSERGKSTLH
Trigger: ATGCAGAGTACTTTTCCCTCTTTCACTCCTGCTCTGCACCCTCCAGGTCCACTGCACCTCCTGAGAGTTCGCCGGCCCGGGCCCCAATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000556793.1
ENST00000628228.1
ENST00000629617.2
CDS CCA 90 bp CAAGCTGCTGCTGTATTTCTGCATGACCCCTTGGAACAAGCCCATTaGGGCCCGGGCCGGCGAACTCTCAGGAGGTGCAGTGGACCTGGA +
Preference number: 5 (lower is better)
Translates to: QAAAVFLHDPLEQAH*GPGRRTLRRCSGPG
Trigger: TCCAGGTCCACTGCACCTCCTGAGAGTTCGCCGGCCCGGGCCCCAATGGGCTTGTTCCAAGGGGTCATGCAGAAATACAGCAGCAGCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000556793.1
ENST00000628228.1
ENST00000629617.2
CDS CCA 90 bp CAGCAGTGGTTGGGCCCCTTGTCTTGTCCGCTAGGCTCTGCTCGATaGCCATCTGCACCAGTTCATCCTCGCTCAGGCTGCTGTACAGGC +
Preference number: 5 (lower is better)
Translates to: QQWLGPLSCPLGSAR*PSAPVHPRSGCCTG
Trigger: GCCTGTACAGCAGCCTGAGCGAGGATGAACTGGTGCAGATGGCCATCGAGCAGAGCCTAGCGGACAAGACAAGGGGCCCAACCACTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000555019.6
ENST00000557613.1
ENST00000612647.3
ENST00000625949.1
CDS CCA 90 bp CAAGCTGCTGCTGTATTTCTGCATGACCCCTTGGAACAAGCCCATTaGGGCCCGGGCCGGCGAACTCTCAGGAGGTGCAGTGGACCTGGT +
Preference number: 5 (lower is better)
Translates to: QAAAVFLHDPLEQAH*GPGRRTLRRCSGPG
Trigger: ACCAGGTCCACTGCACCTCCTGAGAGTTCGCCGGCCCGGGCCCCAATGGGCTTGTTCCAAGGGGTCATGCAGAAATACAGCAGCAGCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555019.6
ENST00000612647.3
CDS-3UTR CAA 90 bp CCCAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGGCAGCCAGCCCTCCTaGTTGGGCTCTGCGAGATTC +
Preference number: 5 (lower is better)
Translates to: PRLPLPPTLGHVFILVFGGSQPS*LGSARF
Trigger: GAATCTCGCAGAGCCCAACAAGGAGGGCTGGCTGCC...TCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CAA 90 bp CCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGAAAGCTCTGAAGGCCGCGGGCGCGTCGTaGAACCTGCTGGAGGGCTGC +
Preference number: 5 (lower is better)
Translates to: PPTLGHVFILVFGEKALKAAGAS*NLLEGC
Trigger: GCAGCCCTCCAGCAGGTTCAACGACGCGCCCGCGGC...CTTCAGAGCTTTCTCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CAA 90 bp AACACCGACGTCCTGAGACTTAGTAAGAAGAGTCTGAGGGGCTACTCCTCTCTCGCCGCGGGCGCGTCGTaGAACCTGCTGGAGGGCTGC +
Preference number: 5 (lower is better)
Translates to: NTDVLRLSKKSLRGYSSLAAGAS*NLLEGC
Trigger: GCAGCCCTCCAGCAGGTTCAACGACGCGCCCGCGGC...GAGAGAGGAGTAGCCCCTCAGACTCTTCTTACTAAGTCTCAGGACGTCGGTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS TCA 90 bp GGGCTCAGGCTCACTGCTGGCCAGGCAGATCCCTGCGGGGCTGGATaGGAGATTCATGGCAAAGCAGAGGATAGGGGAGCAAAGCTGAGA +
Preference number: 5 (lower is better)
Translates to: GLRLTAGQADPCGAG*EIHGKAEDRGAKLR
Trigger: TCTCAGCTTTGCTCCCCTATCCTCTGCTTTGCCATGAATCTCTCATCCAGCCCCGCAGGGATCTGCCTGGCCAGCAGTGAGCCTGAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315988.8
ENST00000629617.2
CDS GCA 90 bp GGCTCTGCTCGATGGCCATCTGCACCAGTTCATCCTCGCTCAGGCTaGTGTACAGGCTGTACTCCTCCTGCCCAATGGTACACTGGCTGC +
Preference number: 5 (lower is better)
Translates to: GSARWPSAPVHPRSG*CTGCTPPAQWYTGC
Trigger: GCAGCCAGTGTACCATTGGGCAGGAGGAGTACAGCCTGTACAGCAGCCTGAGCGAGGATGAACTGGTGCAGATGGCCATCGAGCAGAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000555019.6
ENST00000557613.1
ENST00000612647.3
ENST00000625949.1
CDS GCA 90 bp GTTGGGCCCCTTGTCTTGTCCGCTAGGCTCTGCTCGATGGCCATCTaGACCAGTTCATCCTCGCTCAGGCTGCTGTACAGGCTGTACTCC +
Preference number: 5 (lower is better)
Translates to: VGPLVLSARLCSMAI*TSSSSLRLLYRLYS
Trigger: GGAGTACAGCCTGTACAGCAGCCTGAGCGAGGATGAACTGGTGCAGATGGCCATCGAGCAGAGCCTAGCGGACAAGACAAGGGGCCCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000555019.6
ENST00000557613.1
ENST00000612647.3
ENST00000625949.1
CDS CCA 90 bp TGGAGGCGATGTGCAGCGGGAGCAAGCCGTCCTTGTTGGTCTTGTTaGCGTCGGCACCCTGTGACAGCAGAAACTCCACCACCTCCTCAT +
Preference number: 5 (lower is better)
Translates to: WRRCAAGASRPCWSC*RRHPVTAETPPPPH
Trigger: ATGAGGAGGTGGTGGAGTTTCTGCTGTCACAGGGTGCCGACGCCAACAAGACCAACAAGGACGGCTTGCTCCCGCTGCACATCGCCTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000555507.5
ENST00000612647.3
ENST00000626296.2
ENST00000629617.2
CDS CCA 90 bp TGCCCTTCTTGGAGGCGATGTGCAGCGGGAGCAAGCCGTCCTTGTTaGTCTTGTTGGCGTCGGCACCCTGTGACAGCAGAAACTCCACCA +
Preference number: 5 (lower is better)
Translates to: CPSWRRCAAGASRPC*SCWRRHPVTAETPP
Trigger: TGGTGGAGTTTCTGCTGTCACAGGGTGCCGACGCCAACAAGACCAACAAGGACGGCTTGCTCCCGCTGCACATCGCCTCCAAGAAGGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000555507.5
ENST00000612647.3
ENST00000626296.2
ENST00000629617.2
CDS CCA 90 bp ATGGGTAGAAATGGGCAGGTTGGCGGTTGGTACATGCAGACGCGGTaGCCTCAGCAGTGGTTGGGCCCCTTGTCTTGTCCGCTAGGCTCT +
Preference number: 5 (lower is better)
Translates to: MGRNGQVGGWYMQTR*PQQWLGPLSCPLGS
Trigger: AGAGCCTAGCGGACAAGACAAGGGGCCCAACCACTGCTGAGGCCACCGCGTCTGCATGTACCAACCGCCAACCTGCCCATTTCTACCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000555019.6
ENST00000557613.1
ENST00000612647.3
ENST00000625949.1
CDS CCA 90 bp CAAGCTGCTGCTGTATTTCTGCATGACCCCTTGGAACAAGCCCATTaGGGCCCGGGCCGGCGAACTCTCAGGAGGTGCAGTGGACCTGTT +
Preference number: 5 (lower is better)
Translates to: QAAAVFLHDPLEQAH*GPGRRTLRRCSGPV
Trigger: AACAGGTCCACTGCACCTCCTGAGAGTTCGCCGGCCCGGGCCCCAATGGGCTTGTTCCAAGGGGTCATGCAGAAATACAGCAGCAGCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555287.1
ENST00000628500.1
CDS-3UTR CAA 90 bp CCCAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGACGGTTGCAGCGGTGGTaGGTGTCTGCATTGTGCTGC +
Preference number: 5 (lower is better)
Translates to: PRLPLPPTLGHVFILVFGRLQRW*VSALCC
Trigger: GCAGCACAATGCAGACACCAACCACCGCTGCAACCG...TCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CAA 90 bp CCCAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGACCGTCCTTGTTGGTCTaGTTGGCGTCGGCACCCTGT +
Preference number: 5 (lower is better)
Translates to: PRLPLPPTLGHVFILVFGPSLLV*LASAPC
Trigger: ACAGGGTGCCGACGCCAACAAGACCAACAAGGACGG...TCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CAA 90 bp CAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGTTGGGCCCCTTGTCTaGTCCGCTAGGCTCTGCTCG +
Preference number: 5 (lower is better)
Translates to: QAPPTPYLGPRLHLSLWRVGPLV*SARLCS
Trigger: CGAGCAGAGCCTAGCGGACAAGACAAGGGGCCCAAC...TCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000555019.6
ENST00000612647.3
CDS-3UTR CAA 90 bp CAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGATGGCCTCAGCAGTGGTaGGGCCCCTTGTCTTGTCCG +
Preference number: 5 (lower is better)
Translates to: QAPPTPYLGPRLHLSLWRWPQQW*GPLSCP
Trigger: CGGACAAGACAAGGGGCCCAACCACTGCTGAGGCCA...TCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000555019.6
ENST00000612647.3
CDS TCA 90 bp TCGGGATTTGTTGGAGATGTCCGGCTCTGCCCCTGCTTGGAGCAGTaGCAGGAGACAGTCCAGGTGGCCCCTGCACGTTGCCAAGTAAAC +
Preference number: 5 (lower is better)
Translates to: SGFVGDVRLCPCLEQ*QETVQVAPARCQVN
Trigger: GTTTACTTGGCAACGTGCAGGGGCCACCTGGACTGTCTCCTGTCACTGCTCCAAGCAGGGGCAGAGCCGGACATCTCCAACAAATCCCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000555507.5
ENST00000612647.3
ENST00000626296.2
ENST00000629617.2
CDS TCA 90 bp CGTTCTTGGATTCCACCTTGGCTCCTCCGCTCACCAGGATCTGCATaGCCTCCAGGTCATTGCGAGACACAGACTCGTGCAGAGCGGTCC +
Preference number: 5 (lower is better)
Translates to: RSWIPPWLLRSPGSA*PPGHCETQTRAERS
Trigger: GGACCGCTCTGCACGAGTCTGTGTCTCGCAATGACCTGGAGGTCATGCAGATCCTGGTGAGCGGAGGAGCCAAGGTGGAATCCAAGAACG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000555507.5
ENST00000556062.5
ENST00000612647.3
ENST00000626017.2
ENST00000626296.2
ENST00000629617.2
CDS GCA 90 bp GGTCATTGCGAGACACAGACTCGTGCAGAGCGGTCCAGCCGCGGTTaGAGCGGTGGTTGGTGTCTGCATTGTGCTGCACCAGAATCTTCA +
Preference number: 5 (lower is better)
Translates to: GHCETQTRAERSSRG*SGGWCLHCAAPESS
Trigger: TGAAGATTCTGGTGCAGCACAATGCAGACACCAACCACCGCTGCAACCGCGGCTGGACCGCTCTGCACGAGTCTGTGTCTCGCAATGACC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000555507.5
ENST00000556062.5
ENST00000612647.3
ENST00000626017.2
ENST00000626296.2
ENST00000629617.2
CDS CCA 90 bp GATAGGAAGCAAGGTGACATTCTTCACCCAGGAGGATGTGAGCCGTaGTCGGCAGGTCCCAGGATGAAAGGGGCTCAGGCTCACTGCTGG +
Preference number: 5 (lower is better)
Translates to: DRKQGDILHPGGCEP*SAGPRMKGAQAHCW
Trigger: CCAGCAGTGAGCCTGAGCCCCTTTCATCCTGGGACCTGCCGACCACGGCTCACATCCTCCTGGGTGAAGAATGTCACCTTGCTTCCTATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315988.8
ENST00000629617.2
CDS CCA 90 bp TGGGAGGTCTTGAACAAGCTGCTGCTGTATTTCTGCATGACCCCTTaGAACAAGCCCATTGGGGCCCGGGCCGGCGAACTCTCAGGAGGT +
Preference number: 5 (lower is better)
Translates to: WEVLNKLLLYFCMTP*NKPIGARAGELSGG
Trigger: ACCTCCTGAGAGTTCGCCGGCCCGGGCCCCAATGGGCTTGTTCCAAGGGGTCATGCAGAAATACAGCAGCAGCTTGTTCAAGACCTCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000555287.1
ENST00000556793.1
ENST00000612647.3
ENST00000628228.1
ENST00000628500.1
ENST00000629617.2
CDS CCA 90 bp TCTTGCGCTCGCAGGCTTTGTAGAGCGGTGTCTCTCGGGATTTGTTaGAGATGTCCGGCTCTGCCCCTGCTTGGAGCAGTGACAGGAGAC +
Preference number: 5 (lower is better)
Translates to: SCARRLCRAVSLGIC*RCPALPLLGAVTGD
Trigger: GTCTCCTGTCACTGCTCCAAGCAGGGGCAGAGCCGGACATCTCCAACAAATCCCGAGAGACACCGCTCTACAAAGCCTGCGAGCGCAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000555507.5
ENST00000612647.3
ENST00000626296.2
ENST00000629617.2
CDS-3UTR CAA 90 bp CCCAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGGTGGCCCCTGCACGTaGCCAAGTAAACGGCTGTTT +
Preference number: 5 (lower is better)
Translates to: PRLPLPPTLGHVFILVFGGGPCT*PSKRLF
Trigger: AAACAGCCGTTTACTTGGCAACGTGCAGGGGCCACC...TCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CAA 90 bp CAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGACGGTTGCAGCGGTGGTaGGTGTCTGCATTGTGCTGC +
Preference number: 5 (lower is better)
Translates to: QAPPTPYLGPRLHLSLWRRLQRW*VSALCC
Trigger: GCAGCACAATGCAGACACCAACCACCGCTGCAACCG...TCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CAA 90 bp CCCAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGATCCTTGTTGGTCTTGTaGGCGTCGGCACCCTGTGAC +
Preference number: 5 (lower is better)
Translates to: PRLPLPPTLGHVFILVFGSLLVL*ASAPCD
Trigger: GTCACAGGGTGCCGACGCCAACAAGACCAACAAGGA...TCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CAA 90 bp AACACCGACGTCCTGAGACTTAGTAAGAAGAGTCTGAGGGGCTACTCCTCTCTCCTGATGACGTCGCGGTaGGGGTCGGCGCCGTGTTGC +
Preference number: 5 (lower is better)
Translates to: NTDVLRLSKKSLRGYSSLLMTSR*GSAPCC
Trigger: GCAACACGGCGCCGACCCCAACCGCGACGTCATCAG...GAGAGAGGAGTAGCCCCTCAGACTCTTCTTACTAAGTCTCAGGACGTCGGTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CAA 90 bp CCCAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGACCCCTACCCCCTACCTaGGGCCACGTCTTCATCTTA +
Preference number: 5 (lower is better)
Translates to: PRLPLPPTLGHVFILVFGPLPPT*GHVFIL
Trigger: TAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGG...TCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CAA 90 bp CAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGACAGTGGTTGGGCCCCTaGTCTTGTCCGCTAGGCTCT +
Preference number: 5 (lower is better)
Translates to: QAPPTPYLGPRLHLSLWRQWLGP*SCPLGS
Trigger: AGAGCCTAGCGGACAAGACAAGGGGCCCAACCACTG...TCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000555019.6
ENST00000612647.3
CDS-3UTR CAA 90 bp CAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGAAGCCAGCCCTCCTTGTaGGGCTCTGCGAGATTCTTC +
Preference number: 5 (lower is better)
Translates to: QAPPTPYLGPRLHLSLWRSQPSL*GSARFF
Trigger: GAAGAATCTCGCAGAGCCCAACAAGGAGGGCTGGCT...TCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CAA 90 bp CGTCTGTCACCAGGTCCCCTTGGAGTTGGGAACACCGACGTCCTGAGACTTAGTAGCCAGCCCTCCTTGTaGGGCTCTGCGAGATTCTTC +
Preference number: 5 (lower is better)
Translates to: RLSPGPLGVGNTDVLRLSSQPSL*GSARFF
Trigger: GAAGAATCTCGCAGAGCCCAACAAGGAGGGCTGGCT...ACTAAGTCTCAGGACGTCGGTGTTCCCAACTCCAAGGGGACCTGGTGACAGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CAA 90 bp CAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGTCTCTCGGGATTTGTaGGAGATGTCCGGCTCTGCC +
Preference number: 5 (lower is better)
Translates to: QAPPTPYLGPRLHLSLWRVSRDL*EMSGSA
Trigger: GGCAGAGCCGGACATCTCCAACAAATCCCGAGAGAC...TCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CAA 90 bp CCCAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAATGACCTCCAGGTCATaGCGAGACACAGACTCGTGC +
Preference number: 5 (lower is better)
Translates to: PRLPLPPTLGHVFILVFGMTSRS*RDTDSC
Trigger: GCACGAGTCTGTGTCTCGCAATGACCTGGAGGTCAT...TCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CAA 90 bp CAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGAAGCAAGCCGTCCTTGTaGGTCTTGTTGGCGTCGGCA +
Preference number: 5 (lower is better)
Translates to: QAPPTPYLGPRLHLSLWRSKPSL*VLLASA
Trigger: TGCCGACGCCAACAAGACCAACAAGGACGGCTTGCT...TCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CAA 90 bp CCCAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAAGGTCCATGAGGAACTaGAGCAGCGACAGGCACTTC +
Preference number: 5 (lower is better)
Translates to: PRLPLPPTLGHVFILVFGRSMRN*SSDRHF
Trigger: GAAGTGCCTGTCGCTGCTCAAGTTCCTCATGGACCT...TCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CAA 90 bp CGTCTGTCACCAGGTCCCCTTGGAGTTGGGAACACCGACGTCCTGAGACTTAGTGGTGAGCCAGAGGTCTaGGAGGTTCTGCCTTCTCCT +
Preference number: 5 (lower is better)
Translates to: RLSPGPLGVGNTDVLRLSGEPEV*EVLPSP
Trigger: AGGAGAAGGCAGAACCTCCAAGACCTCTGGCTCACC...ACTAAGTCTCAGGACGTCGGTGTTCCCAACTCCAAGGGGACCTGGTGACAGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CAA 90 bp CGTCTGTCACCAGGTCCCCTTGGAGTTGGGAACACCGACGTCCTGAGACTTAGTCCCCTACCCCCTACCTaGGGCCACGTCTTCATCTTA +
Preference number: 5 (lower is better)
Translates to: RLSPGPLGVGNTDVLRLSPLPPT*GHVFIL
Trigger: TAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGG...ACTAAGTCTCAGGACGTCGGTGTTCCCAACTCCAAGGGGACCTGGTGACAGACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS GCA 90 bp CAGACACAGGGCTCTGAACCAAAGCAGATGGCCGGGTCCTCTGTGTaGTGGACACAGCTGCTGTGTCTCCGGATTATTTTTGGCCCTTGG +
Preference number: 5 (lower is better)
Translates to: QTQGSEPKQMAGSSV*WTQLLCLRIIFGPW
Trigger: CCAAGGGCCAAAAATAATCCGGAGACACAGCAGCTGTGTCCAGCACACAGAGGACCCGGCCATCTGCTTTGGTTCAGAGCCCTGTGTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315988.8
ENST00000629617.2
CDS CCA 90 bp ACACAGGGCTCTGAACCAAAGCAGATGGCCGGGTCCTCTGTGTGCTaGACACAGCTGCTGTGTCTCCGGATTATTTTTGGCCCTTGGAGG +
Preference number: 5 (lower is better)
Translates to: TQGSEPKQMAGSSVC*TQLLCLRIIFGPWR
Trigger: CCTCCAAGGGCCAAAAATAATCCGGAGACACAGCAGCTGTGTCCAGCACACAGAGGACCCGGCCATCTGCTTTGGTTCAGAGCCCTGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315988.8
ENST00000629617.2
CDS-3UTR CAA 90 bp CCCAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGTCTCCGGATTATTTTaGGCCCTTGGAGGAAGCCCT +
Preference number: 5 (lower is better)
Translates to: PRLPLPPTLGHVFILVFGVSGLF*ALGGSP
Trigger: AGGGCTTCCTCCAAGGGCCAAAAATAATCCGGAGAC...TCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000315988.8
ENST00000629617.2
CDS-3UTR CAA 90 bp CAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGCCAGCTGGGAGGTCTaGAACAAGCTGCTGCTGTAT +
Preference number: 5 (lower is better)
Translates to: QAPPTPYLGPRLHLSLWRASWEV*NKLLLY
Trigger: ATACAGCAGCAGCTTGTTCAAGACCTCCCAGCTGGC...TCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CAA 90 bp AACACCGACGTCCTGAGACTTAGTAAGAAGAGTCTGAGGGGCTACTCCTCTCTCGGCAGCCAGCCCTCCTaGTTGGGCTCTGCGAGATTC +
Preference number: 5 (lower is better)
Translates to: NTDVLRLSKKSLRGYSSLGSQPS*LGSARF
Trigger: GAATCTCGCAGAGCCCAACAAGGAGGGCTGGCTGCC...GAGAGAGGAGTAGCCCCTCAGACTCTTCTTACTAAGTCTCAGGACGTCGGTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CAA 90 bp CAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGGTGTCTCTCGGGATTaGTTGGAGATGTCCGGCTCT +
Preference number: 5 (lower is better)
Translates to: QAPPTPYLGPRLHLSLWRGVSRD*LEMSGS
Trigger: AGAGCCGGACATCTCCAACAAATCCCGAGAGACACC...TCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CAA 90 bp CAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGAATGACCTCCAGGTCATaGCGAGACACAGACTCGTGC +
Preference number: 5 (lower is better)
Translates to: QAPPTPYLGPRLHLSLWRMTSRS*RDTDSC
Trigger: GCACGAGTCTGTGTCTCGCAATGACCTGGAGGTCAT...TCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CAA 90 bp CCCAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAATGTCAGCACCGTACTaGGCTAAGAACCTCAAGGCC +
Preference number: 5 (lower is better)
Translates to: PRLPLPPTLGHVFILVFGMSAPY*AKNLKA
Trigger: GGCCTTGAGGTTCTTAGCCAAGTACGGTGCTGACAT...TCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CAA 90 bp CCAGGTCCCCTTGGAGTTGGGAACACCGACGTCCTGAGACTTAGTAAGAAGAGTGGGAGCAAGCCGTCCTaGTTGGTCTTGTTGGCGTCG +
Preference number: 5 (lower is better)
Translates to: PGPLGVGNTDVLRLSKKSGSKPS*LVLLAS
Trigger: CGACGCCAACAAGACCAACAAGGACGGCTTGCTCCC...ACTCTTCTTACTAAGTCTCAGGACGTCGGTGTTCCCAACTCCAAGGGGACCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CAA 90 bp TTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGAAAGCTCTGAAGTCAAGTGGTAGCACCTCGTCGTGGTaGCGCTCGGCCGCCAGGTGC +
Preference number: 5 (lower is better)
Translates to: LGHVFILVFGEKALKSSGSTSSW*RSAARC
Trigger: GCACCTGGCGGCCGAGCGCAACCACGACGAGGTGCT...ACCACTTGACTTCAGAGCTTTCTCTCCAAAGACTAAGATGAAGACGTGGCCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CAA 90 bp CAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGCGTACACGTTGTTGTaGACCACCGCGAAGTACAGC +
Preference number: 5 (lower is better)
Translates to: QAPPTPYLGPRLHLSLWRAYTLL*TTAKYS
Trigger: GCTGTACTTCGCGGTGGTCAACAACAACGTGTACGC...TCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CAA 90 bp CGTCTGTCACCAGGTCCCCTTGGAGTTGGGAACACCGACGTCCTGAGACTTAGTGTGGCGTACACGTTGTaGTTGACCACCGCGAAGTAC +
Preference number: 5 (lower is better)
Translates to: RLSPGPLGVGNTDVLRLSVAYTL*LTTAKY
Trigger: GTACTTCGCGGTGGTCAACAACAACGTGTACGCCAC...ACTAAGTCTCAGGACGTCGGTGTTCCCAACTCCAAGGGGACCTGGTGACAGACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CAA 90 bp AGGTTTCTGCCATTCCTGAAGGTAGAGAAGGTCTGGGATCTGCTCATCAGTTTGCTGATGACGTCGCGGTaGGGGTCGGCGCCGTGTTGC +
Preference number: 5 (lower is better)
Translates to: RFLPFLKVEKVWDLLISLLMTSR*GSAPCC
Trigger: GCAACACGGCGCCGACCCCAACCGCGACGTCATCAG...CAAACTGATGAGCAGATCCCAGACCTTCTCTACCTTCAGGAATGGCAGAAACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CAA 90 bp CGTCTGTCACCAGGTCCCCTTGGAGTTGGGAACACCGACGTCCTGAGACTTAGTAGGTCCATGAGGAACTaGAGCAGCGACAGGCACTTC +
Preference number: 5 (lower is better)
Translates to: RLSPGPLGVGNTDVLRLSRSMRN*SSDRHF
Trigger: GAAGTGCCTGTCGCTGCTCAAGTTCCTCATGGACCT...ACTAAGTCTCAGGACGTCGGTGTTCCCAACTCCAAGGGGACCTGGTGACAGACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CAA 90 bp CCAGGTCCCCTTGGAGTTGGGAACACCGACGTCCTGAGACTTAGTAAGAAGAGTTGTCACCAGGTCCCCTaGGAGTTGGGAACACCGACG +
Preference number: 5 (lower is better)
Translates to: PGPLGVGNTDVLRLSKKSCHQVP*ELGTPT
Trigger: CGTCGGTGTTCCCAACTCCAAGGGGACCTGGTGACA...ACTCTTCTTACTAAGTCTCAGGACGTCGGTGTTCCCAACTCCAAGGGGACCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CAA 90 bp AACACCGACGTCCTGAGACTTAGTAAGAAGAGTCTGAGGGGCTACTCCTCTCTCTGGGCAGGTTGGCGGTaGGTACATGCAGACGCGGTG +
Preference number: 5 (lower is better)
Translates to: NTDVLRLSKKSLRGYSSLWAGWR*VHADAV
Trigger: CACCGCGTCTGCATGTACCAACCGCCAACCTGCCCA...GAGAGAGGAGTAGCCCCTCAGACTCTTCTTACTAAGTCTCAGGACGTCGGTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555019.6
ENST00000612647.3
CDS-3UTR CAA 90 bp CCCAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAAGCAGGGAGTTTATTTaGGGGCCACCGCATGACCAA +
Preference number: 5 (lower is better)
Translates to: PRLPLPPTLGHVFILVFGSREFI*GPPHDQ
Trigger: TTGGTCATGCGGTGGCCCCAAAATAAACTCCCTGCT...TCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000612647.3
CDS CCA 90 bp GTCAGAGCACAGATGCCGGTGAAGCAACAGACCCAGCAAGGACGATaGGAAACTGATCAGATAAGTCCTGAGGTCCCCATCAGCACCGTC +
Preference number: 5 (lower is better)
Translates to: VRAQMPVKQQTQQGR*ETDQISPEVPISTV
Trigger: GACGGTGCTGATGGGGACCTCAGGACTTATCTGATCAGTTTCCCATCGTCCTTGCTGGGTCTGTTGCTTCACCGGCATCTGTGCTCTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555507.5
ENST00000626296.2
CDS-3UTR CAA 90 bp CGTCTGTCACCAGGTCCCCTTGGAGTTGGGAACACCGACGTCCTGAGACTTAGTGTCTCCGGATTATTTTaGGCCCTTGGAGGAAGCCCT +
Preference number: 5 (lower is better)
Translates to: RLSPGPLGVGNTDVLRLSVSGLF*ALGGSP
Trigger: AGGGCTTCCTCCAAGGGCCAAAAATAATCCGGAGAC...ACTAAGTCTCAGGACGTCGGTGTTCCCAACTCCAAGGGGACCTGGTGACAGACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315988.8
ENST00000629617.2
CDS-3UTR CAA 90 bp CCAGGTCCCCTTGGAGTTGGGAACACCGACGTCCTGAGACTTAGTAAGAAGAGTGTCTCTCGGGATTTGTaGGAGATGTCCGGCTCTGCC +
Preference number: 5 (lower is better)
Translates to: PGPLGVGNTDVLRLSKKSVSRDL*EMSGSA
Trigger: GGCAGAGCCGGACATCTCCAACAAATCCCGAGAGAC...ACTCTTCTTACTAAGTCTCAGGACGTCGGTGTTCCCAACTCCAAGGGGACCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CAA 90 bp AACACCGACGTCCTGAGACTTAGTAAGAAGAGTCTGAGGGGCTACTCCTCTCTCCGGTTGCAGCGGTGGTaGGTGTCTGCATTGTGCTGC +
Preference number: 5 (lower is better)
Translates to: NTDVLRLSKKSLRGYSSLRLQRW*VSALCC
Trigger: GCAGCACAATGCAGACACCAACCACCGCTGCAACCG...GAGAGAGGAGTAGCCCCTCAGACTCTTCTTACTAAGTCTCAGGACGTCGGTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CAA 90 bp CAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGAATGTCAGCACCGTACTaGGCTAAGAACCTCAAGGCC +
Preference number: 5 (lower is better)
Translates to: QAPPTPYLGPRLHLSLWRMSAPY*AKNLKA
Trigger: GGCCTTGAGGTTCTTAGCCAAGTACGGTGCTGACAT...TCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CAA 90 bp AACACCGACGTCCTGAGACTTAGTAAGAAGAGTCTGAGGGGCTACTCCTCTCTCCCGTCCTTGTTGGTCTaGTTGGCGTCGGCACCCTGT +
Preference number: 5 (lower is better)
Translates to: NTDVLRLSKKSLRGYSSLPSLLV*LASAPC
Trigger: ACAGGGTGCCGACGCCAACAAGACCAACAAGGACGG...GAGAGAGGAGTAGCCCCTCAGACTCTTCTTACTAAGTCTCAGGACGTCGGTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CAA 90 bp CCAGGTCCCCTTGGAGTTGGGAACACCGACGTCCTGAGACTTAGTAAGAAGAGTAGCAAGCCGTCCTTGTaGGTCTTGTTGGCGTCGGCA +
Preference number: 5 (lower is better)
Translates to: PGPLGVGNTDVLRLSKKSSKPSL*VLLASA
Trigger: TGCCGACGCCAACAAGACCAACAAGGACGGCTTGCT...ACTCTTCTTACTAAGTCTCAGGACGTCGGTGTTCCCAACTCCAAGGGGACCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CAA 90 bp CCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGAAAGCTCTGAAGGGGAGCAAGCCGTCCTaGTTGGTCTTGTTGGCGTCG +
Preference number: 5 (lower is better)
Translates to: PPTLGHVFILVFGEKALKGSKPS*LVLLAS
Trigger: CGACGCCAACAAGACCAACAAGGACGGCTTGCTCCC...CTTCAGAGCTTTCTCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CAA 90 bp CCAGGTCCCCTTGGAGTTGGGAACACCGACGTCCTGAGACTTAGTAAGAAGAGTTCGGTGGCGTACACGTaGTTGTTGACCACCGCGAAG +
Preference number: 5 (lower is better)
Translates to: PGPLGVGNTDVLRLSKKSSVAYT*LLTTAK
Trigger: CTTCGCGGTGGTCAACAACAACGTGTACGCCACCGA...ACTCTTCTTACTAAGTCTCAGGACGTCGGTGTTCCCAACTCCAAGGGGACCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CAA 90 bp AGGTCTGGGATCTGCTCATCAGTTTGTAAACAAATGATTCTTCTCCTTGACACAACCACGCTGGGCTCCTaGTCGGCCGCGGGCGCGTCG +
Preference number: 5 (lower is better)
Translates to: RSGICSSVCKQMILLLDTTTLGS*SAAGAS
Trigger: CGACGCGCCCGCGGCCGACAAGGAGCCCAGCGTGGT...TGTGTCAAGGAGAAGAATCATTTGTTTACAAACTGATGAGCAGATCCCAGACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CAA 90 bp CCAGGTCCCCTTGGAGTTGGGAACACCGACGTCCTGAGACTTAGTAAGAAGAGTCCCCTACCCCCTACCTaGGGCCACGTCTTCATCTTA +
Preference number: 5 (lower is better)
Translates to: PGPLGVGNTDVLRLSKKSPLPPT*GHVFIL
Trigger: TAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGG...ACTCTTCTTACTAAGTCTCAGGACGTCGGTGTTCCCAACTCCAAGGGGACCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CAA 90 bp CAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGTAGAAATGGGCAGGTaGGCGGTTGGTACATGCAGA +
Preference number: 5 (lower is better)
Translates to: QAPPTPYLGPRLHLSLWRVEMGR*AVGTCR
Trigger: TCTGCATGTACCAACCGCCAACCTGCCCATTTCTAC...TCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000555019.6
ENST00000612647.3
CDS CCA 90 bp CTGGGAGCGGCAAGGTGTCTAGGAGTTTTATACGGTATTTCCCAATaGCCTTTCGAACCCGCAGTCGGCAAAGGTGAGCCAGAGGTCTTG +
Preference number: 5 (lower is better)
Translates to: LGAARCLGVLYGISQ*PFEPAVGKGEPEVL
Trigger: CAAGACCTCTGGCTCACCTTTGCCGACTGCGGGTTCGAAAGGCCATTGGGAAATACCGTATAAAACTCCTAGACACCTTGCCGCTCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315988.8
ENST00000553883.1
ENST00000555019.6
ENST00000612647.3
ENST00000625368.1
ENST00000629617.2
CDS-3UTR CAA 90 bp CAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGATTATTTTTGGCCCTaGGAGGAAGCCCTGGGAGAT +
Preference number: 5 (lower is better)
Translates to: QAPPTPYLGPRLHLSLWRDYFWP*EEALGD
Trigger: ATCTCCCAGGGCTTCCTCCAAGGGCCAAAAATAATC...TCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000315988.8
ENST00000629617.2
CDS-3UTR CAA 90 bp AGGTTTCTGCCATTCCTGAAGGTAGAGAAGGTCTGGGATCTGCTCATCAGTTTGGGCAGCCAGCCCTCCTaGTTGGGCTCTGCGAGATTC +
Preference number: 5 (lower is better)
Translates to: RFLPFLKVEKVWDLLISLGSQPS*LGSARF
Trigger: GAATCTCGCAGAGCCCAACAAGGAGGGCTGGCTGCC...CAAACTGATGAGCAGATCCCAGACCTTCTCTACCTTCAGGAATGGCAGAAACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CAA 90 bp AACACCGACGTCCTGAGACTTAGTAAGAAGAGTCTGAGGGGCTACTCCTCTCTCGGTGGCCCCTGCACGTaGCCAAGTAAACGGCTGTTT +
Preference number: 5 (lower is better)
Translates to: NTDVLRLSKKSLRGYSSLGGPCT*PSKRLF
Trigger: AAACAGCCGTTTACTTGGCAACGTGCAGGGGCCACC...GAGAGAGGAGTAGCCCCTCAGACTCTTCTTACTAAGTCTCAGGACGTCGGTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CAA 90 bp CCAGGTCCCCTTGGAGTTGGGAACACCGACGTCCTGAGACTTAGTAAGAAGAGTATGACCTCCAGGTCATaGCGAGACACAGACTCGTGC +
Preference number: 5 (lower is better)
Translates to: PGPLGVGNTDVLRLSKKSMTSRS*RDTDSC
Trigger: GCACGAGTCTGTGTCTCGCAATGACCTGGAGGTCAT...ACTCTTCTTACTAAGTCTCAGGACGTCGGTGTTCCCAACTCCAAGGGGACCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CAA 90 bp CCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGAAAGCTCTGAAGTTCTTGGATTCCACCTaGGCTCCTCCGCTCACCAGG +
Preference number: 5 (lower is better)
Translates to: PPTLGHVFILVFGEKALKFLDST*APPLTR
Trigger: CCTGGTGAGCGGAGGAGCCAAGGTGGAATCCAAGAA...CTTCAGAGCTTTCTCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CAA 90 bp CCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGAAAGCTCTGAAGTCGCTGGCCTGCGTGTaGATGTCAGCACCGTACTTG +
Preference number: 5 (lower is better)
Translates to: PPTLGHVFILVFGEKALKSLACV*MSAPYL
Trigger: CAAGTACGGTGCTGACATCAACACGCAGGCCAGCGA...CTTCAGAGCTTTCTCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CAA 90 bp CCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGAAAGCTCTGAAGTCCTTGTTGGTCTTGTaGGCGTCGGCACCCTGTGAC +
Preference number: 5 (lower is better)
Translates to: PPTLGHVFILVFGEKALKSLLVL*ASAPCD
Trigger: GTCACAGGGTGCCGACGCCAACAAGACCAACAAGGA...CTTCAGAGCTTTCTCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CAA 90 bp CCAGGTCCCCTTGGAGTTGGGAACACCGACGTCCTGAGACTTAGTAAGAAGAGTGTGGCGTACACGTTGTaGTTGACCACCGCGAAGTAC +
Preference number: 5 (lower is better)
Translates to: PGPLGVGNTDVLRLSKKSVAYTL*LTTAKY
Trigger: GTACTTCGCGGTGGTCAACAACAACGTGTACGCCAC...ACTCTTCTTACTAAGTCTCAGGACGTCGGTGTTCCCAACTCCAAGGGGACCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CAA 90 bp CCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGAAAGCTCTGAAGTCGGTGGCGTACACGTaGTTGTTGACCACCGCGAAG +
Preference number: 5 (lower is better)
Translates to: PPTLGHVFILVFGEKALKSVAYT*LLTTAK
Trigger: CTTCGCGGTGGTCAACAACAACGTGTACGCCACCGA...CTTCAGAGCTTTCTCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CAA 90 bp AACACCGACGTCCTGAGACTTAGTAAGAAGAGTCTGAGGGGCTACTCCTCTCTCTCGGTGGCGTACACGTaGTTGTTGACCACCGCGAAG +
Preference number: 5 (lower is better)
Translates to: NTDVLRLSKKSLRGYSSLSVAYT*LLTTAK
Trigger: CTTCGCGGTGGTCAACAACAACGTGTACGCCACCGA...GAGAGAGGAGTAGCCCCTCAGACTCTTCTTACTAAGTCTCAGGACGTCGGTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CAA 90 bp CCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGAAAGCTCTGAAGGGTTCTGCCTTCTCCTaGATGACGGCCCAGTCCTCA +
Preference number: 5 (lower is better)
Translates to: PPTLGHVFILVFGEKALKGSAFS*MTAQSS
Trigger: TGAGGACTGGGCCGTCATCAAGGAGAAGGCAGAACC...CTTCAGAGCTTTCTCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CAA 90 bp AACACCGACGTCCTGAGACTTAGTAAGAAGAGTCTGAGGGGCTACTCCTCTCTCGGTTCTGCCTTCTCCTaGATGACGGCCCAGTCCTCA +
Preference number: 5 (lower is better)
Translates to: NTDVLRLSKKSLRGYSSLGSAFS*MTAQSS
Trigger: TGAGGACTGGGCCGTCATCAAGGAGAAGGCAGAACC...GAGAGAGGAGTAGCCCCTCAGACTCTTCTTACTAAGTCTCAGGACGTCGGTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CAA 90 bp AACACCGACGTCCTGAGACTTAGTAAGAAGAGTCTGAGGGGCTACTCCTCTCTCGGTGAGCCAGAGGTCTaGGAGGTTCTGCCTTCTCCT +
Preference number: 5 (lower is better)
Translates to: NTDVLRLSKKSLRGYSSLGEPEV*EVLPSP
Trigger: AGGAGAAGGCAGAACCTCCAAGACCTCTGGCTCACC...GAGAGAGGAGTAGCCCCTCAGACTCTTCTTACTAAGTCTCAGGACGTCGGTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CAA 90 bp CCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGAAAGCTCTGAAGCCCCTACCCCCTACCTaGGGCCACGTCTTCATCTTA +
Preference number: 5 (lower is better)
Translates to: PPTLGHVFILVFGEKALKPLPPT*GHVFIL
Trigger: TAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGG...CTTCAGAGCTTTCTCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS TCA 90 bp TGCACTCTCCCAGCCACTTCCTCCAGCGTGAGCAGCACTTCCTCCTaGCTCTCAGACTCTGTGGTTATTAATGGTGTCAGAGCACAGATG +
Preference number: 5 (lower is better)
Translates to: CTLPATSSSVSSTSS*LSDSVVINGVRAQM
Trigger: CATCTGTGCTCTGACACCATTAATAACCACAGAGTCTGAGAGTCAGGAGGAAGTGCTGCTCACGCTGGAGGAAGTGGCTGGGAGAGTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555507.5
ENST00000626296.2
CDS-3UTR CAA 90 bp CCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGAAAGCTCTGAAGTTTCTGCATGACCCCTaGGAACAAGCCCATTGGGGC +
Preference number: 5 (lower is better)
Translates to: PPTLGHVFILVFGEKALKFLHDP*EQAHWG
Trigger: GCCCCAATGGGCTTGTTCCAAGGGGTCATGCAGAAA...CTTCAGAGCTTTCTCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CAA 90 bp AACACCGACGTCCTGAGACTTAGTAAGAAGAGTCTGAGGGGCTACTCCTCTCTCGCCAGCTGGGAGGTCTaGAACAAGCTGCTGCTGTAT +
Preference number: 5 (lower is better)
Translates to: NTDVLRLSKKSLRGYSSLASWEV*NKLLLY
Trigger: ATACAGCAGCAGCTTGTTCAAGACCTCCCAGCTGGC...GAGAGAGGAGTAGCCCCTCAGACTCTTCTTACTAAGTCTCAGGACGTCGGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CAA 90 bp CAGGCTCCCCCTACCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGAAGATTCTTCCCTTCCTaGATCATGGTCTTCAAGGCC +
Preference number: 5 (lower is better)
Translates to: QAPPTPYLGPRLHLSLWRRFFPS*IMVFKA
Trigger: GGCCTTGAAGACCATGATCAAGGAAGGGAAGAATCT...TCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGGTAGGGGGAGCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CAA 90 bp CCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGAAAGCTCTGAAGGGTGTCTCTCGGGATTaGTTGGAGATGTCCGGCTCT +
Preference number: 5 (lower is better)
Translates to: PPTLGHVFILVFGEKALKGVSRD*LEMSGS
Trigger: AGAGCCGGACATCTCCAACAAATCCCGAGAGACACC...CTTCAGAGCTTTCTCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CAA 90 bp AGGTTTCTGCCATTCCTGAAGGTAGAGAAGGTCTGGGATCTGCTCATCAGTTTGCGGTTGCAGCGGTGGTaGGTGTCTGCATTGTGCTGC +
Preference number: 5 (lower is better)
Translates to: RFLPFLKVEKVWDLLISLRLQRW*VSALCC
Trigger: GCAGCACAATGCAGACACCAACCACCGCTGCAACCG...CAAACTGATGAGCAGATCCCAGACCTTCTCTACCTTCAGGAATGGCAGAAACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CAA 90 bp CCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGAAAGCTCTGAAGATGACCTCCAGGTCATaGCGAGACACAGACTCGTGC +
Preference number: 5 (lower is better)
Translates to: PPTLGHVFILVFGEKALKMTSRS*RDTDSC
Trigger: GCACGAGTCTGTGTCTCGCAATGACCTGGAGGTCAT...CTTCAGAGCTTTCTCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CAA 90 bp CCAGGTCCCCTTGGAGTTGGGAACACCGACGTCCTGAGACTTAGTAAGAAGAGTATGTCAGCACCGTACTaGGCTAAGAACCTCAAGGCC +
Preference number: 5 (lower is better)
Translates to: PGPLGVGNTDVLRLSKKSMSAPY*AKNLKA
Trigger: GGCCTTGAGGTTCTTAGCCAAGTACGGTGCTGACAT...ACTCTTCTTACTAAGTCTCAGGACGTCGGTGTTCCCAACTCCAAGGGGACCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CAA 90 bp AGGTCTGGGATCTGCTCATCAGTTTGTAAACAAATGATTCTTCTCCTTGACACAAGCACCTCGTCGTGGTaGCGCTCGGCCGCCAGGTGC +
Preference number: 5 (lower is better)
Translates to: RSGICSSVCKQMILLLDTSTSSW*RSAARC
Trigger: GCACCTGGCGGCCGAGCGCAACCACGACGAGGTGCT...TGTGTCAAGGAGAAGAATCATTTGTTTACAAACTGATGAGCAGATCCCAGACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CAA 90 bp CCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGAAAGCTCTGAAGGCGTACACGTTGTTGTaGACCACCGCGAAGTACAGC +
Preference number: 5 (lower is better)
Translates to: PPTLGHVFILVFGEKALKAYTLL*TTAKYS
Trigger: GCTGTACTTCGCGGTGGTCAACAACAACGTGTACGC...CTTCAGAGCTTTCTCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CAA 90 bp AACACCGACGTCCTGAGACTTAGTAAGAAGAGTCTGAGGGGCTACTCCTCTCTCGCGTACACGTTGTTGTaGACCACCGCGAAGTACAGC +
Preference number: 5 (lower is better)
Translates to: NTDVLRLSKKSLRGYSSLAYTLL*TTAKYS
Trigger: GCTGTACTTCGCGGTGGTCAACAACAACGTGTACGC...GAGAGAGGAGTAGCCCCTCAGACTCTTCTTACTAAGTCTCAGGACGTCGGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CAA 90 bp AGGTTTCTGCCATTCCTGAAGGTAGAGAAGGTCTGGGATCTGCTCATCAGTTTGTGTCACCAGGTCCCCTaGGAGTTGGGAACACCGACG +
Preference number: 5 (lower is better)
Translates to: RFLPFLKVEKVWDLLISLCHQVP*ELGTPT
Trigger: CGTCGGTGTTCCCAACTCCAAGGGGACCTGGTGACA...CAAACTGATGAGCAGATCCCAGACCTTCTCTACCTTCAGGAATGGCAGAAACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CAA 90 bp AGGTTTCTGCCATTCCTGAAGGTAGAGAAGGTCTGGGATCTGCTCATCAGTTTGGTCTCTCGGGATTTGTaGGAGATGTCCGGCTCTGCC +
Preference number: 5 (lower is better)
Translates to: RFLPFLKVEKVWDLLISLVSRDL*EMSGSA
Trigger: GGCAGAGCCGGACATCTCCAACAAATCCCGAGAGAC...CAAACTGATGAGCAGATCCCAGACCTTCTCTACCTTCAGGAATGGCAGAAACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CAA 90 bp AGGTTTCTGCCATTCCTGAAGGTAGAGAAGGTCTGGGATCTGCTCATCAGTTTGTTCTTGGATTCCACCTaGGCTCCTCCGCTCACCAGG +
Preference number: 5 (lower is better)
Translates to: RFLPFLKVEKVWDLLISLFLDST*APPLTR
Trigger: CCTGGTGAGCGGAGGAGCCAAGGTGGAATCCAAGAA...CAAACTGATGAGCAGATCCCAGACCTTCTCTACCTTCAGGAATGGCAGAAACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CAA 90 bp TTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGAAAGCTCTGAAGTCAAGTGGTCCGTCCTTGTTGGTCTaGTTGGCGTCGGCACCCTGT +
Preference number: 5 (lower is better)
Translates to: LGHVFILVFGEKALKSSGPSLLV*LASAPC
Trigger: ACAGGGTGCCGACGCCAACAAGACCAACAAGGACGG...ACCACTTGACTTCAGAGCTTTCTCTCCAAAGACTAAGATGAAGACGTGGCCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CAA 90 bp AGGTTTCTGCCATTCCTGAAGGTAGAGAAGGTCTGGGATCTGCTCATCAGTTTGAGCAAGCCGTCCTTGTaGGTCTTGTTGGCGTCGGCA +
Preference number: 5 (lower is better)
Translates to: RFLPFLKVEKVWDLLISLSKPSL*VLLASA
Trigger: TGCCGACGCCAACAAGACCAACAAGGACGGCTTGCT...CAAACTGATGAGCAGATCCCAGACCTTCTCTACCTTCAGGAATGGCAGAAACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CAA 90 bp TTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGAAAGCTCTGAAGTCAAGTGGTGGGAGCAAGCCGTCCTaGTTGGTCTTGTTGGCGTCG +
Preference number: 5 (lower is better)
Translates to: LGHVFILVFGEKALKSSGGSKPS*LVLLAS
Trigger: CGACGCCAACAAGACCAACAAGGACGGCTTGCTCCC...ACCACTTGACTTCAGAGCTTTCTCTCCAAAGACTAAGATGAAGACGTGGCCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CAA 90 bp AGGTTTCTGCCATTCCTGAAGGTAGAGAAGGTCTGGGATCTGCTCATCAGTTTGTCGGTGGCGTACACGTaGTTGTTGACCACCGCGAAG +
Preference number: 5 (lower is better)
Translates to: RFLPFLKVEKVWDLLISLSVAYT*LLTTAK
Trigger: CTTCGCGGTGGTCAACAACAACGTGTACGCCACCGA...CAAACTGATGAGCAGATCCCAGACCTTCTCTACCTTCAGGAATGGCAGAAACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CAA 90 bp AGGTTTCTGCCATTCCTGAAGGTAGAGAAGGTCTGGGATCTGCTCATCAGTTTGGGTGAGCCAGAGGTCTaGGAGGTTCTGCCTTCTCCT +
Preference number: 5 (lower is better)
Translates to: RFLPFLKVEKVWDLLISLGEPEV*EVLPSP
Trigger: AGGAGAAGGCAGAACCTCCAAGACCTCTGGCTCACC...CAAACTGATGAGCAGATCCCAGACCTTCTCTACCTTCAGGAATGGCAGAAACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CAA 90 bp CCCCCTACCTTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGAAAGCTCTGAAGGTAGAAATGGGCAGGTaGGCGGTTGGTACATGCAGA +
Preference number: 5 (lower is better)
Translates to: PPTLGHVFILVFGEKALKVEMGR*AVGTCR
Trigger: TCTGCATGTACCAACCGCCAACCTGCCCATTTCTAC...CTTCAGAGCTTTCTCTCCAAAGACTAAGATGAAGACGTGGCCCAAGGTAGGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000555019.6
ENST00000612647.3
CDS GCA 90 bp TCTCAGATTTCCTGTTTGGAGGTTGCACTGAGGAAGCTGCAATCCTaGCTTCCGTTCCTCCGGGTGCATCGAATACAGACTCTCACTTCA +
Preference number: 5 (lower is better)
Translates to: SQISCLEVALRKLQS*LPFLRVHRIQTLTS
Trigger: TGAAGTGAGAGTCTGTATTCGATGCACCCGGAGGAACGGAAGGCAGGATTGCAGCTTCCTCAGTGCAACCTCCAAACAGGAAATCTGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612647.3
CDS-3UTR CAA 90 bp AACACCGACGTCCTGAGACTTAGTAAGAAGAGTCTGAGGGGCTACTCCTCTCTCTCTTCATCGCCATCCTaGATGGCCTTTATCAAGGGG +
Preference number: 5 (lower is better)
Translates to: NTDVLRLSKKSLRGYSSLSSSPS*MAFIKG
Trigger: CCCCTTGATAAAGGCCATCAAGGATGGCGATGAAGA...GAGAGAGGAGTAGCCCCTCAGACTCTTCTTACTAAGTCTCAGGACGTCGGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CAA 90 bp CCAGGTCCCCTTGGAGTTGGGAACACCGACGTCCTGAGACTTAGTAAGAAGAGTAGATTCTTCCCTTCCTaGATCATGGTCTTCAAGGCC +
Preference number: 5 (lower is better)
Translates to: PGPLGVGNTDVLRLSKKSRFFPS*IMVFKA
Trigger: GGCCTTGAAGACCATGATCAAGGAAGGGAAGAATCT...ACTCTTCTTACTAAGTCTCAGGACGTCGGTGTTCCCAACTCCAAGGGGACCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CAA 90 bp TTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGAAAGCTCTGAAGTCAAGTGGTAGCCAGCCCTCCTTGTaGGGCTCTGCGAGATTCTTC +
Preference number: 5 (lower is better)
Translates to: LGHVFILVFGEKALKSSGSQPSL*GSARFF
Trigger: GAAGAATCTCGCAGAGCCCAACAAGGAGGGCTGGCT...ACCACTTGACTTCAGAGCTTTCTCTCCAAAGACTAAGATGAAGACGTGGCCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CAA 90 bp TTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGAAAGCTCTGAAGTCAAGTGGTGGTGGCCCCTGCACGTaGCCAAGTAAACGGCTGTTT +
Preference number: 5 (lower is better)
Translates to: LGHVFILVFGEKALKSSGGGPCT*PSKRLF
Trigger: AAACAGCCGTTTACTTGGCAACGTGCAGGGGCCACC...ACCACTTGACTTCAGAGCTTTCTCTCCAAAGACTAAGATGAAGACGTGGCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CAA 90 bp TTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGAAAGCTCTGAAGTCAAGTGGTTCGCTGGCCTGCGTGTaGATGTCAGCACCGTACTTG +
Preference number: 5 (lower is better)
Translates to: LGHVFILVFGEKALKSSGSLACV*MSAPYL
Trigger: CAAGTACGGTGCTGACATCAACACGCAGGCCAGCGA...ACCACTTGACTTCAGAGCTTTCTCTCCAAAGACTAAGATGAAGACGTGGCCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CAA 90 bp TTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGAAAGCTCTGAAGTCAAGTGGTTCCTTGTTGGTCTTGTaGGCGTCGGCACCCTGTGAC +
Preference number: 5 (lower is better)
Translates to: LGHVFILVFGEKALKSSGSLLVL*ASAPCD
Trigger: GTCACAGGGTGCCGACGCCAACAAGACCAACAAGGA...ACCACTTGACTTCAGAGCTTTCTCTCCAAAGACTAAGATGAAGACGTGGCCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CAA 90 bp AGGTTTCTGCCATTCCTGAAGGTAGAGAAGGTCTGGGATCTGCTCATCAGTTTGGCGTACACGTTGTTGTaGACCACCGCGAAGTACAGC +
Preference number: 5 (lower is better)
Translates to: RFLPFLKVEKVWDLLISLAYTLL*TTAKYS
Trigger: GCTGTACTTCGCGGTGGTCAACAACAACGTGTACGC...CAAACTGATGAGCAGATCCCAGACCTTCTCTACCTTCAGGAATGGCAGAAACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CAA 90 bp AGGTTTCTGCCATTCCTGAAGGTAGAGAAGGTCTGGGATCTGCTCATCAGTTTGAGGTCCATGAGGAACTaGAGCAGCGACAGGCACTTC +
Preference number: 5 (lower is better)
Translates to: RFLPFLKVEKVWDLLISLRSMRN*SSDRHF
Trigger: GAAGTGCCTGTCGCTGCTCAAGTTCCTCATGGACCT...CAAACTGATGAGCAGATCCCAGACCTTCTCTACCTTCAGGAATGGCAGAAACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CAA 90 bp TTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGAAAGCTCTGAAGTCAAGTGGTGGTGAGCCAGAGGTCTaGGAGGTTCTGCCTTCTCCT +
Preference number: 5 (lower is better)
Translates to: LGHVFILVFGEKALKSSGGEPEV*EVLPSP
Trigger: AGGAGAAGGCAGAACCTCCAAGACCTCTGGCTCACC...ACCACTTGACTTCAGAGCTTTCTCTCCAAAGACTAAGATGAAGACGTGGCCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CAA 90 bp CCAGGTCCCCTTGGAGTTGGGAACACCGACGTCCTGAGACTTAGTAAGAAGAGTTCTCAGATTTCCTGTTaGGAGGTTGCACTGAGGAAG +
Preference number: 5 (lower is better)
Translates to: PGPLGVGNTDVLRLSKKSSQISC*EVALRK
Trigger: CTTCCTCAGTGCAACCTCCAAACAGGAAATCTGAGA...ACTCTTCTTACTAAGTCTCAGGACGTCGGTGTTCCCAACTCCAAGGGGACCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612647.3
CDS CCA 90 bp AGAGTCCGTGAGAACCACGATGTCTATGCCTCTCAGATCCACTTTTaGGGAGGCTTCTGCATCAATAGTCCCATTTCCCAGATGGAGAAG +
Preference number: 5 (lower is better)
Translates to: RVRENHDVYASQIHF*GGFCINSPISQMEK
Trigger: CTTCTCCATCTGGGAAATGGGACTATTGATGCAGAAGCCTCCCCAAAAGTGGATCTGAGAGGCATAGACATCGTGGTTCTCACGGACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000555507.5
ENST00000556062.5
ENST00000626017.2
ENST00000626296.2
CDS-3UTR CAA 90 bp AGGTCTGGGATCTGCTCATCAGTTTGTAAACAAATGATTCTTCTCCTTGACACAGGCAGCCAGCCCTCCTaGTTGGGCTCTGCGAGATTC +
Preference number: 5 (lower is better)
Translates to: RSGICSSVCKQMILLLDTGSQPS*LGSARF
Trigger: GAATCTCGCAGAGCCCAACAAGGAGGGCTGGCTGCC...TGTGTCAAGGAGAAGAATCATTTGTTTACAAACTGATGAGCAGATCCCAGACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CAA 90 bp TTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGAAAGCTCTGAAGTCAAGTGGTGTGGCGTACACGTTGTaGTTGACCACCGCGAAGTAC +
Preference number: 5 (lower is better)
Translates to: LGHVFILVFGEKALKSSGVAYTL*LTTAKY
Trigger: GTACTTCGCGGTGGTCAACAACAACGTGTACGCCAC...ACCACTTGACTTCAGAGCTTTCTCTCCAAAGACTAAGATGAAGACGTGGCCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CAA 90 bp TTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGAAAGCTCTGAAGTCAAGTGGTAGGTCCATGAGGAACTaGAGCAGCGACAGGCACTTC +
Preference number: 5 (lower is better)
Translates to: LGHVFILVFGEKALKSSGRSMRN*SSDRHF
Trigger: GAAGTGCCTGTCGCTGCTCAAGTTCCTCATGGACCT...ACCACTTGACTTCAGAGCTTTCTCTCCAAAGACTAAGATGAAGACGTGGCCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CAA 90 bp AGGTCTGGGATCTGCTCATCAGTTTGTAAACAAATGATTCTTCTCCTTGACACAGTTGGGCCCCTTGTCTaGTCCGCTAGGCTCTGCTCG +
Preference number: 5 (lower is better)
Translates to: RSGICSSVCKQMILLLDTVGPLV*SARLCS
Trigger: CGAGCAGAGCCTAGCGGACAAGACAAGGGGCCCAAC...TGTGTCAAGGAGAAGAATCATTTGTTTACAAACTGATGAGCAGATCCCAGACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555019.6
ENST00000612647.3
CDS-3UTR CAA 90 bp AGGTCTGGGATCTGCTCATCAGTTTGTAAACAAATGATTCTTCTCCTTGACACATGGCCTCAGCAGTGGTaGGGCCCCTTGTCTTGTCCG +
Preference number: 5 (lower is better)
Translates to: RSGICSSVCKQMILLLDTWPQQW*GPLSCP
Trigger: CGGACAAGACAAGGGGCCCAACCACTGCTGAGGCCA...TGTGTCAAGGAGAAGAATCATTTGTTTACAAACTGATGAGCAGATCCCAGACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555019.6
ENST00000612647.3
CDS-3UTR CAA 90 bp AGGTCTGGGATCTGCTCATCAGTTTGTAAACAAATGATTCTTCTCCTTGACACATGGGCAGGTTGGCGGTaGGTACATGCAGACGCGGTG +
Preference number: 5 (lower is better)
Translates to: RSGICSSVCKQMILLLDTWAGWR*VHADAV
Trigger: CACCGCGTCTGCATGTACCAACCGCCAACCTGCCCA...TGTGTCAAGGAGAAGAATCATTTGTTTACAAACTGATGAGCAGATCCCAGACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555019.6
ENST00000612647.3
CDS CCA 90 bp CCAGGCAGTTCTGAAACGCTGTCCTTTGAAGCAGGGAGTTTATTTTaGGGCCACCGCATGACCAACGTTGACAAGCCAAACTATAAGATG +
Preference number: 5 (lower is better)
Translates to: PGSSETLSFEAGSLF*GHRMTNVDKPNYKM
Trigger: CATCTTATAGTTTGGCTTGTCAACGTTGGTCATGCGGTGGCCCCAAAATAAACTCCCTGCTTCAAAGGACAGCGTTTCAGAACTGCCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000555287.1
ENST00000555374.1
ENST00000556337.1
ENST00000612647.3
ENST00000626322.1
ENST00000626794.1
ENST00000628500.1
CDS-3UTR CAA 90 bp AGGTTTCTGCCATTCCTGAAGGTAGAGAAGGTCTGGGATCTGCTCATCAGTTTGTCTTCATCGCCATCCTaGATGGCCTTTATCAAGGGG +
Preference number: 5 (lower is better)
Translates to: RFLPFLKVEKVWDLLISLSSSPS*MAFIKG
Trigger: CCCCTTGATAAAGGCCATCAAGGATGGCGATGAAGA...CAAACTGATGAGCAGATCCCAGACCTTCTCTACCTTCAGGAATGGCAGAAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CAA 90 bp TTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGAAAGCTCTGAAGTCAAGTGGTATGTCAGCACCGTACTaGGCTAAGAACCTCAAGGCC +
Preference number: 5 (lower is better)
Translates to: LGHVFILVFGEKALKSSGMSAPY*AKNLKA
Trigger: GGCCTTGAGGTTCTTAGCCAAGTACGGTGCTGACAT...ACCACTTGACTTCAGAGCTTTCTCTCCAAAGACTAAGATGAAGACGTGGCCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CAA 90 bp AGGTCTGGGATCTGCTCATCAGTTTGTAAACAAATGATTCTTCTCCTTGACACACCGTCCTTGTTGGTCTaGTTGGCGTCGGCACCCTGT +
Preference number: 5 (lower is better)
Translates to: RSGICSSVCKQMILLLDTPSLLV*LASAPC
Trigger: ACAGGGTGCCGACGCCAACAAGACCAACAAGGACGG...TGTGTCAAGGAGAAGAATCATTTGTTTACAAACTGATGAGCAGATCCCAGACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CAA 90 bp AGGTCTGGGATCTGCTCATCAGTTTGTAAACAAATGATTCTTCTCCTTGACACACAGTGGTTGGGCCCCTaGTCTTGTCCGCTAGGCTCT +
Preference number: 5 (lower is better)
Translates to: RSGICSSVCKQMILLLDTQWLGP*SCPLGS
Trigger: AGAGCCTAGCGGACAAGACAAGGGGCCCAACCACTG...TGTGTCAAGGAGAAGAATCATTTGTTTACAAACTGATGAGCAGATCCCAGACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555019.6
ENST00000612647.3
CDS GCA 90 bp CCAAACTATAAGATGTTATACATCTCAGATTTCCTGTTTGGAGGTTaGACTGAGGAAGCTGCAATCCTGCCTTCCGTTCCTCCGGGTGCA +
Preference number: 5 (lower is better)
Translates to: PNYKMLYISDFLFGG*TEEAAILPSVPPGA
Trigger: TGCACCCGGAGGAACGGAAGGCAGGATTGCAGCTTCCTCAGTGCAACCTCCAAACAGGAAATCTGAGATGTATAACATCTTATAGTTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000555374.1
ENST00000556337.1
ENST00000612647.3
ENST00000626322.1
ENST00000626794.1
CDS-3UTR CAA 90 bp TTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGAAAGCTCTGAAGTCAAGTGGTGATTATTTTTGGCCCTaGGAGGAAGCCCTGGGAGAT +
Preference number: 5 (lower is better)
Translates to: LGHVFILVFGEKALKSSGDYFWP*EEALGD
Trigger: ATCTCCCAGGGCTTCCTCCAAGGGCCAAAAATAATC...ACCACTTGACTTCAGAGCTTTCTCTCCAAAGACTAAGATGAAGACGTGGCCCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315988.8
ENST00000629617.2
CDS-3UTR CAA 90 bp AGGTCTGGGATCTGCTCATCAGTTTGTAAACAAATGATTCTTCTCCTTGACACATTCTTGGATTCCACCTaGGCTCCTCCGCTCACCAGG +
Preference number: 5 (lower is better)
Translates to: RSGICSSVCKQMILLLDTFLDST*APPLTR
Trigger: CCTGGTGAGCGGAGGAGCCAAGGTGGAATCCAAGAA...TGTGTCAAGGAGAAGAATCATTTGTTTACAAACTGATGAGCAGATCCCAGACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CAA 90 bp AGGTCTGGGATCTGCTCATCAGTTTGTAAACAAATGATTCTTCTCCTTGACACATCGCTGGCCTGCGTGTaGATGTCAGCACCGTACTTG +
Preference number: 5 (lower is better)
Translates to: RSGICSSVCKQMILLLDTSLACV*MSAPYL
Trigger: CAAGTACGGTGCTGACATCAACACGCAGGCCAGCGA...TGTGTCAAGGAGAAGAATCATTTGTTTACAAACTGATGAGCAGATCCCAGACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CAA 90 bp AGGTCTGGGATCTGCTCATCAGTTTGTAAACAAATGATTCTTCTCCTTGACACATCCTTGTTGGTCTTGTaGGCGTCGGCACCCTGTGAC +
Preference number: 5 (lower is better)
Translates to: RSGICSSVCKQMILLLDTSLLVL*ASAPCD
Trigger: GTCACAGGGTGCCGACGCCAACAAGACCAACAAGGA...TGTGTCAAGGAGAAGAATCATTTGTTTACAAACTGATGAGCAGATCCCAGACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CAA 90 bp AGGTCTGGGATCTGCTCATCAGTTTGTAAACAAATGATTCTTCTCCTTGACACAAGCAAGCCGTCCTTGTaGGTCTTGTTGGCGTCGGCA +
Preference number: 5 (lower is better)
Translates to: RSGICSSVCKQMILLLDTSKPSL*VLLASA
Trigger: TGCCGACGCCAACAAGACCAACAAGGACGGCTTGCT...TGTGTCAAGGAGAAGAATCATTTGTTTACAAACTGATGAGCAGATCCCAGACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CAA 90 bp AGGTCTGGGATCTGCTCATCAGTTTGTAAACAAATGATTCTTCTCCTTGACACAGGTTCTGCCTTCTCCTaGATGACGGCCCAGTCCTCA +
Preference number: 5 (lower is better)
Translates to: RSGICSSVCKQMILLLDTGSAFS*MTAQSS
Trigger: TGAGGACTGGGCCGTCATCAAGGAGAAGGCAGAACC...TGTGTCAAGGAGAAGAATCATTTGTTTACAAACTGATGAGCAGATCCCAGACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CAA 90 bp AGGTCTGGGATCTGCTCATCAGTTTGTAAACAAATGATTCTTCTCCTTGACACAGCCAGCTGGGAGGTCTaGAACAAGCTGCTGCTGTAT +
Preference number: 5 (lower is better)
Translates to: RSGICSSVCKQMILLLDTASWEV*NKLLLY
Trigger: ATACAGCAGCAGCTTGTTCAAGACCTCCCAGCTGGC...TGTGTCAAGGAGAAGAATCATTTGTTTACAAACTGATGAGCAGATCCCAGACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CAA 90 bp TTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGAAAGCTCTGAAGTCAAGTGGTAGATTCTTCCCTTCCTaGATCATGGTCTTCAAGGCC +
Preference number: 5 (lower is better)
Translates to: LGHVFILVFGEKALKSSGRFFPS*IMVFKA
Trigger: GGCCTTGAAGACCATGATCAAGGAAGGGAAGAATCT...ACCACTTGACTTCAGAGCTTTCTCTCCAAAGACTAAGATGAAGACGTGGCCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS-3UTR CAA 90 bp AGGTCTGGGATCTGCTCATCAGTTTGTAAACAAATGATTCTTCTCCTTGACACAGGTGTCTCTCGGGATTaGTTGGAGATGTCCGGCTCT +
Preference number: 5 (lower is better)
Translates to: RSGICSSVCKQMILLLDTGVSRD*LEMSGS
Trigger: AGAGCCGGACATCTCCAACAAATCCCGAGAGACACC...TGTGTCAAGGAGAAGAATCATTTGTTTACAAACTGATGAGCAGATCCCAGACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS TCA 90 bp AAACGCTGTCCTTTGAAGCAGGGAGTTTATTTTGGGGCCACCGCATaGCCAACGTTGACAAGCCAAACTATAAGATGTTATACATCTCAG +
Preference number: 5 (lower is better)
Translates to: KRCPLKQGVYFGATA*PTLTSQTIRCYTSQ
Trigger: CTGAGATGTATAACATCTTATAGTTTGGCTTGTCAACGTTGGTCATGCGGTGGCCCCAAAATAAACTCCCTGCTTCAAAGGACAGCGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000555287.1
ENST00000555374.1
ENST00000556337.1
ENST00000612647.3
ENST00000626322.1
ENST00000626794.1
ENST00000628500.1
CDS-3UTR CAA 90 bp TTGGGCCACGTCTTCATCTTAGTCTTTGGAGAGAAAGCTCTGAAGTCAAGTGGTCTGAAACGCTGTCCTTaGAAGCAGGGAGTTTATTTT +
Preference number: 5 (lower is better)
Translates to: LGHVFILVFGEKALKSSGLKRCP*KQGVYF
Trigger: AAAATAAACTCCCTGCTTCAAAGGACAGCGTTTCAG...ACCACTTGACTTCAGAGCTTTCTCTCCAAAGACTAAGATGAAGACGTGGCCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612647.3
CDS-3UTR CAA 90 bp AGGTCTGGGATCTGCTCATCAGTTTGTAAACAAATGATTCTTCTCCTTGACACAAGATTCTTCCCTTCCTaGATCATGGTCTTCAAGGCC +
Preference number: 5 (lower is better)
Translates to: RSGICSSVCKQMILLLDTRFFPS*IMVFKA
Trigger: GGCCTTGAAGACCATGATCAAGGAAGGGAAGAATCT...TGTGTCAAGGAGAAGAATCATTTGTTTACAAACTGATGAGCAGATCCCAGACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000612647.3
ENST00000629617.2
CDS TCA 72 bp CAGGAGAGCTCGGGCGCCAGGCTCGGCTGGTCGCCCTaGCCGCGGGCTGCGACGCGGATCCCACCGGCAGGG +
Preference number: 6 (lower is better)
Translates to: QESSGARLGWSP*PRAATRIPPAG
Trigger: CCCTGCCGGTGGGATCCGCGTCGCAGCCCGCGGTCAGGGCGACCAGCCGAGCCTGGCGCCCGAGCTCTCCTG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553883.1
ENST00000625368.1
CDS GCA 72 bp CGTATGCGCGTGCGGCTGGTCACCGGCAGCAGCATCTaGACGATCCTGCCGGGTCGAGGGGCGGGCGCGGGT +
Preference number: 6 (lower is better)
Translates to: RMRVRLVTGSSI*TILPGRGAGAG
Trigger: ACCCGCGCCCGCCCCTCGACCCGGCAGGATCGTGCAGATGCTGCTGCCGGTGACCAGCCGCACGCGCATACG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553883.1
ENST00000625368.1
CDS CAA 90 bp ACGTCGAAGCGCGCGCTCAGCAGCGCCTCCAGCACCTCGTCGTGGTaGCGCTCGGCCGCCAGGTGCAGCGGACTGACGCCGCTACGGCGT +
Preference number: 6 (lower is better)
Translates to: TSKRALSSASSTSSW*RSAARCSGLTPLRR
Trigger: ACGCCGTAGCGGCGTCAGTCCGCTGCACCTGGCGGCCGAGCGCAACCACGACGAGGTGCTGGAGGCGCTGCTGAGCGCGCGCTTCGACGT
72% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000315988.8
ENST00000553883.1
ENST00000555019.6
ENST00000555507.5
ENST00000612647.3
ENST00000625368.1
ENST00000626296.2
ENST00000629617.2
CDS GCA 72 bp TCCAGCACCTCGTCGTGGTTGCGCTCGGCCGCCAGGTaGAGCGGACTGACGCCGCTACGGCGTATGCGCGTG +
Preference number: 6 (lower is better)
Translates to: SSTSSWLRSAAR*SGLTPLRRMRV
Trigger: CACGCGCATACGCCGTAGCGGCGTCAGTCCGCTGCACCTGGCGGCCGAGCGCAACCACGACGAGGTGCTGGA
71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000315988.8
ENST00000553883.1
ENST00000555019.6
ENST00000555507.5
ENST00000612647.3
ENST00000625368.1
ENST00000626296.2
ENST00000629617.2
CDS CCA 72 bp GCAGGGGGCGCCGCGGGTCAACCATTCTCACCCCACTaGGCAGGGTGGGTCGGCTGCCGTCTCCGCTTTACA +
Preference number: 6 (lower is better)
Translates to: AGGAAGQPFSPH*AGWVGCRLRFT
Trigger: TGTAAAGCGGAGACGGCAGCCGACCCACCCTGCCCAGTGGGGTGAGAATGGTTGACCCGCGGCGCCCCCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553883.1
ENST00000625368.1
CDS TCA 72 bp GCTGCACGTTGCCCACGTAGTCCAGGAGGACATCGATaGTGGGCCCCGCCCAGCGGCTCACCTCTGGGGCAG +
Preference number: 6 (lower is better)
Translates to: AARCPRSPGGHR*WAPPSGSPLGQ
Trigger: CTGCCCCAGAGGTGAGCCGCTGGGCGGGGCCCATCATCGATGTCCTCCTGGACTACGTGGGCAACGTGCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000315988.8
ENST00000553883.1
ENST00000555019.6
ENST00000555507.5
ENST00000612647.3
ENST00000625368.1
ENST00000626296.2
ENST00000629617.2
CDS CAA 90 bp GGGTCGGCGCCGTGTTGCAGCAGCAGCTCGGTGGCGTACACGTTGTaGTTGACCACCGCGAAGTACAGCGCGGAGCTGCGCCGGTCTTCG +
Preference number: 6 (lower is better)
Translates to: GSAPCCSSSSVAYTL*LTTAKYSAELRRSS
Trigger: CGAAGACCGGCGCAGCTCCGCGCTGTACTTCGCGGTGGTCAACAACAACGTGTACGCCACCGAGCTGCTGCTGCAACACGGCGCCGACCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000315988.8
ENST00000553883.1
ENST00000555019.6
ENST00000555507.5
ENST00000556337.1
ENST00000612647.3
ENST00000625368.1
ENST00000626296.2
ENST00000626794.1
ENST00000629617.2
CDS GCA 72 bp GCCCATTGGGGCCCGGGCCGGCGAACTCTCAGGAGGTaGAGTGGACCTGGAGGGTGCAGAGCAGGAGTGAAA +
Preference number: 6 (lower is better)
Translates to: AHWGPGRRTLRR*SGPGGCRAGVK
Trigger: TTTCACTCCTGCTCTGCACCCTCCAGGTCCACTGCACCTCCTGAGAGTTCGCCGGCCCGGGCCCCAATGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000556793.1
ENST00000628228.1
ENST00000629617.2
CDS CCA 72 bp TGGTCCAGCAGCAGCTGCATTGTGCGCAGGCAGCCGTaGCGGATGGCCACGAGCAAGGGGCTGATGACGTCG +
Preference number: 6 (lower is better)
Translates to: WSSSSCIVRRQP*RMATSKGLMTS
Trigger: CGACGTCATCAGCCCCTTGCTCGTGGCCATCCGCCACGGCTGCCTGCGCACAATGCAGCTGCTGCTGGACCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000315988.8
ENST00000553883.1
ENST00000555019.6
ENST00000555507.5
ENST00000556337.1
ENST00000612647.3
ENST00000625368.1
ENST00000626296.2
ENST00000626794.1
ENST00000629617.2
CDS CCA 72 bp TCATTCCCAGGACACCCACGCCATGTTGGGCTAGGATaGGCTCTGGGCGGTCTCTGCCACCAGCCCCTGCAC +
Preference number: 6 (lower is better)
Translates to: SFPGHPRHVGLG*ALGGLCHQPLH
Trigger: GTGCAGGGGCTGGTGGCAGAGACCGCCCAGAGCCCATCCTAGCCCAACATGGCGTGGGTGTCCTGGGAATGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555507.5
ENST00000626296.2
CDS CCA 72 bp GAGGCAGGCCTCATTCCCAGGACACCCACGCCATGTTaGGCTAGGATGGGCTCTGGGCGGTCTCTGCCACCA +
Preference number: 6 (lower is better)
Translates to: EAGLIPRTPTPC*ARMGSGRSLPP
Trigger: TGGTGGCAGAGACCGCCCAGAGCCCATCCTAGCCCAACATGGCGTGGGTGTCCTGGGAATGAGGCCTGCCTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555507.5
ENST00000626296.2
CDS CAA 72 bp GACGCGGTGGCCTCAGCAGTGGTTGGGCCCCTTGTCTaGTCCGCTAGGCTCTGCTCGATGGCCATCTGCACC +
Preference number: 6 (lower is better)
Translates to: DAVASAVVGPLV*SARLCSMAICT
Trigger: GGTGCAGATGGCCATCGAGCAGAGCCTAGCGGACAAGACAAGGGGCCCAACCACTGCTGAGGCCACCGCGTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000555019.6
ENST00000557613.1
ENST00000612647.3
ENST00000625949.1
CDS TCA 72 bp GTTGCAGCAGCAGCTCGGTGGCGTACACGTTGTTGTTaGCCACCGCGAAGTACAGCGCGGAGCTGCGCCGGT +
Preference number: 6 (lower is better)
Translates to: VAAAARWRTRCC*PPRSTARSCAG
Trigger: ACCGGCGCAGCTCCGCGCTGTACTTCGCGGTGGTCAACAACAACGTGTACGCCACCGAGCTGCTGCTGCAAC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000315988.8
ENST00000553883.1
ENST00000555019.6
ENST00000555507.5
ENST00000556337.1
ENST00000612647.3
ENST00000625368.1
ENST00000626296.2
ENST00000626794.1
ENST00000629617.2
CDS GCA 72 bp AGCGGTCCAGCCGCGGTTGCAGCGGTGGTTGGTGTCTaGATTGTGCTGCACCAGAATCTTCACGGCCTCCGC +
Preference number: 6 (lower is better)
Translates to: SGPAAVAAVVGV*IVLHQNLHGLR
Trigger: GCGGAGGCCGTGAAGATTCTGGTGCAGCACAATGCAGACACCAACCACCGCTGCAACCGCGGCTGGACCGCT
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000555507.5
ENST00000556062.5
ENST00000612647.3
ENST00000626017.2
ENST00000626296.2
ENST00000629617.2
CDS CCA 72 bp GCAGGTCCCAGGATGAAAGGGGCTCAGGCTCACTGCTaGCCAGGCAGATCCCTGCGGGGCTGGATGAGAGAT +
Preference number: 6 (lower is better)
Translates to: AGPRMKGAQAHC*PGRSLRGWMRD
Trigger: ATCTCTCATCCAGCCCCGCAGGGATCTGCCTGGCCAGCAGTGAGCCTGAGCCCCTTTCATCCTGGGACCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315988.8
ENST00000629617.2
CDS CAA 72 bp TGTTGCAGCAGCAGCTCGGTGGCGTACACGTTGTTGTaGACCACCGCGAAGTACAGCGCGGAGCTGCGCCGG +
Preference number: 6 (lower is better)
Translates to: CCSSSSVAYTLL*TTAKYSAELRR
Trigger: CCGGCGCAGCTCCGCGCTGTACTTCGCGGTGGTCAACAACAACGTGTACGCCACCGAGCTGCTGCTGCAACA
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000315988.8
ENST00000553883.1
ENST00000555019.6
ENST00000555507.5
ENST00000556337.1
ENST00000612647.3
ENST00000625368.1
ENST00000626296.2
ENST00000626794.1
ENST00000629617.2
CDS CAA 72 bp CCGTGTTGCAGCAGCAGCTCGGTGGCGTACACGTTGTaGTTGACCACCGCGAAGTACAGCGCGGAGCTGCGC +
Preference number: 6 (lower is better)
Translates to: PCCSSSSVAYTL*LTTAKYSAELR
Trigger: GCGCAGCTCCGCGCTGTACTTCGCGGTGGTCAACAACAACGTGTACGCCACCGAGCTGCTGCTGCAACACGG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000315988.8
ENST00000553883.1
ENST00000555019.6
ENST00000555507.5
ENST00000556337.1
ENST00000612647.3
ENST00000625368.1
ENST00000626296.2
ENST00000626794.1
ENST00000629617.2
CDS CAA 72 bp GCGCCGTGTTGCAGCAGCAGCTCGGTGGCGTACACGTaGTTGTTGACCACCGCGAAGTACAGCGCGGAGCTG +
Preference number: 6 (lower is better)
Translates to: APCCSSSSVAYT*LLTTAKYSAEL
Trigger: CAGCTCCGCGCTGTACTTCGCGGTGGTCAACAACAACGTGTACGCCACCGAGCTGCTGCTGCAACACGGCGC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000315988.8
ENST00000553883.1
ENST00000555019.6
ENST00000555507.5
ENST00000556337.1
ENST00000612647.3
ENST00000625368.1
ENST00000626296.2
ENST00000626794.1
ENST00000629617.2
CDS CAA 72 bp GATACGAACTCACAGAACTGCACCACGCTGGGCTCCTaGTCGGCCGCGGGCGCGTCGTTGAACCTGCTGGAG +
Preference number: 6 (lower is better)
Translates to: DTNSQNCTTLGS*SAAGASLNLLE
Trigger: CTCCAGCAGGTTCAACGACGCGCCCGCGGCCGACAAGGAGCCCAGCGTGGTGCAGTTCTGTGAGTTCGTATC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000315988.8
ENST00000553883.1
ENST00000555019.6
ENST00000555507.5
ENST00000612647.3
ENST00000625368.1
ENST00000626296.2
ENST00000629617.2
CDS CAA 72 bp GTCCGCAGGCCTGGTCCATGGGTAGAAATGGGCAGGTaGGCGGTTGGTACATGCAGACGCGGTGGCCTCAGC +
Preference number: 6 (lower is better)
Translates to: VRRPGPWVEMGR*AVGTCRRGGLS
Trigger: GCTGAGGCCACCGCGTCTGCATGTACCAACCGCCAACCTGCCCATTTCTACCCATGGACCAGGCCTGCGGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557613.1
ENST00000625949.1
CDS CAA 90 bp TGCAGAGCGGTCCAGCCGCGGTTGCAGCGGTGGTTGGTGTCTGCATaGTGCTGCACCAGAATCTTCACGGCCTCCGCGTTCTTGCGCTCG +
Preference number: 6 (lower is better)
Translates to: CRAVQPRLQRWLVSA*CCTRIFTASAFLRS
Trigger: CGAGCGCAAGAACGCGGAGGCCGTGAAGATTCTGGTGCAGCACAATGCAGACACCAACCACCGCTGCAACCGCGGCTGGACCGCTCTGCA
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000555507.5
ENST00000556062.5
ENST00000612647.3
ENST00000626017.2
ENST00000626296.2
ENST00000629617.2
CDS CAA 90 bp GACACAGACTCGTGCAGAGCGGTCCAGCCGCGGTTGCAGCGGTGGTaGGTGTCTGCATTGTGCTGCACCAGAATCTTCACGGCCTCCGCG +
Preference number: 6 (lower is better)
Translates to: DTDSCRAVQPRLQRW*VSALCCTRIFTASA
Trigger: CGCGGAGGCCGTGAAGATTCTGGTGCAGCACAATGCAGACACCAACCACCGCTGCAACCGCGGCTGGACCGCTCTGCACGAGTCTGTGTC
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000555507.5
ENST00000556062.5
ENST00000612647.3
ENST00000626017.2
ENST00000626296.2
ENST00000629617.2
CDS CAA 90 bp ACCTTGGCTCCTCCGCTCACCAGGATCTGCATGACCTCCAGGTCATaGCGAGACACAGACTCGTGCAGAGCGGTCCAGCCGCGGTTGCAG +
Preference number: 6 (lower is better)
Translates to: TLAPPLTRICMTSRS*RDTDSCRAVQPRLQ
Trigger: CTGCAACCGCGGCTGGACCGCTCTGCACGAGTCTGTGTCTCGCAATGACCTGGAGGTCATGCAGATCCTGGTGAGCGGAGGAGCCAAGGT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000555507.5
ENST00000556062.5
ENST00000612647.3
ENST00000626017.2
ENST00000626296.2
ENST00000629617.2
CDS CAA 90 bp CATGAGAAGCAGGGCTCGCCGTCGCAGCCCAGGTCCATGAGGAACTaGAGCAGCGACAGGCACTTCATGGCGAACATGATGGTGGCGGGG +
Preference number: 6 (lower is better)
Translates to: HEKQGSPSQPRSMRN*SSDRHFMANMMVAG
Trigger: CCCCGCCACCATCATGTTCGCCATGAAGTGCCTGTCGCTGCTCAAGTTCCTCATGGACCTGGGCTGCGACGGCGAGCCCTGCTTCTCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000315988.8
ENST00000553883.1
ENST00000555019.6
ENST00000555507.5
ENST00000612647.3
ENST00000625368.1
ENST00000626296.2
ENST00000629617.2
CDS CAA 90 bp CAGGTTGGCGGTTGGTACATGCAGACGCGGTGGCCTCAGCAGTGGTaGGGCCCCTTGTCTTGTCCGCTAGGCTCTGCTCGATGGCCATCT +
Preference number: 6 (lower is better)
Translates to: QVGGWYMQTRWPQQW*GPLSCPLGSARWPS
Trigger: AGATGGCCATCGAGCAGAGCCTAGCGGACAAGACAAGGGGCCCAACCACTGCTGAGGCCACCGCGTCTGCATGTACCAACCGCCAACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000555019.6
ENST00000557613.1
ENST00000612647.3
ENST00000625949.1
CDS GCA 72 bp GAGACACAGACTCGTGCAGAGCGGTCCAGCCGCGGTTaGAGCGGTGGTTGGTGTCTGCATTGTGCTGCACCA +
Preference number: 6 (lower is better)
Translates to: ETQTRAERSSRG*SGGWCLHCAAP
Trigger: TGGTGCAGCACAATGCAGACACCAACCACCGCTGCAACCGCGGCTGGACCGCTCTGCACGAGTCTGTGTCTC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000555507.5
ENST00000556062.5
ENST00000612647.3
ENST00000626017.2
ENST00000626296.2
ENST00000629617.2
CDS GCA 72 bp TGCATGACCTCCAGGTCATTGCGAGACACAGACTCGTaGAGAGCGGTCCAGCCGCGGTTGCAGCGGTGGTTG +
Preference number: 6 (lower is better)
Translates to: CMTSRSLRDTDS*RAVQPRLQRWL
Trigger: CAACCACCGCTGCAACCGCGGCTGGACCGCTCTGCACGAGTCTGTGTCTCGCAATGACCTGGAGGTCATGCA
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000555507.5
ENST00000556062.5
ENST00000612647.3
ENST00000626017.2
ENST00000626296.2
ENST00000629617.2
CDS GCA 72 bp TGTGCTGCACCAGAATCTTCACGGCCTCCGCGTTCTTaGGCTCGCAGGCTCGCTGCAGGACTTTCAGGCAGC +
Preference number: 6 (lower is better)
Translates to: CAAPESSRPPRS*ARRLAAGLSGS
Trigger: GCTGCCTGAAAGTCCTGCAGCGAGCCTGCGAGCGCAAGAACGCGGAGGCCGTGAAGATTCTGGTGCAGCACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556062.5
ENST00000626017.2
CDS GCA 72 bp CCATGGGTAGAAATGGGCAGGTTGGCGGTTGGTACATaGAGACGCGGTGGCCTCAGCAGTGGTTGGGCCCCT +
Preference number: 6 (lower is better)
Translates to: PWVEMGRLAVGT*RRGGLSSGWAP
Trigger: AGGGGCCCAACCACTGCTGAGGCCACCGCGTCTGCATGTACCAACCGCCAACCTGCCCATTTCTACCCATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000555019.6
ENST00000557613.1
ENST00000612647.3
ENST00000625949.1
CDS CCA 72 bp AAACGGCTGTTTCCTCCTGCAGGGTGCGCTGGTCGATaGTCCCTGGGTACGCTCGCTGCAGGACTTTCAGGC +
Preference number: 6 (lower is better)
Translates to: KRLFPPAGCAGR*SLGTLAAGLSG
Trigger: GCCTGAAAGTCCTGCAGCGAGCGTACCCAGGGACCATCGACCAGCGCACCCTGCAGGAGGAAACAGCCGTTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000555287.1
ENST00000555507.5
ENST00000612647.3
ENST00000626296.2
ENST00000628500.1
ENST00000629617.2
CDS CCA 72 bp CGTGCAGAGCGGTCCAGCCGCGGTTGCAGCGGTGGTTaGTGTCTGCATTGTGCTGCACCAGAATCTTCACGG +
Preference number: 6 (lower is better)
Translates to: RAERSSRGCSGG*CLHCAAPESSR
Trigger: CCGTGAAGATTCTGGTGCAGCACAATGCAGACACCAACCACCGCTGCAACCGCGGCTGGACCGCTCTGCACG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000555507.5
ENST00000556062.5
ENST00000612647.3
ENST00000626017.2
ENST00000626296.2
ENST00000629617.2
CDS CCA 72 bp GACATCGATGATGGGCCCCGCCCAGCGGCTCACCTCTaGGGCAGATACGAACTCACAGAACTGCACCACGCT +
Preference number: 6 (lower is better)
Translates to: DIDDGPRPAAHL*GRYELTELHHA
Trigger: AGCGTGGTGCAGTTCTGTGAGTTCGTATCTGCCCCAGAGGTGAGCCGCTGGGCGGGGCCCATCATCGATGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000315988.8
ENST00000553883.1
ENST00000555019.6
ENST00000555507.5
ENST00000612647.3
ENST00000625368.1
ENST00000626296.2
ENST00000629617.2
CDS CCA 72 bp AATGGGCAGGTTGGCGGTTGGTACATGCAGACGCGGTaGCCTCAGCAGTGGTTGGGCCCCTTGTCTTGTCCG +
Preference number: 6 (lower is better)
Translates to: NGQVGGWYMQTR*PQQWLGPLSCP
Trigger: CGGACAAGACAAGGGGCCCAACCACTGCTGAGGCCACCGCGTCTGCATGTACCAACCGCCAACCTGCCCATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000555019.6
ENST00000557613.1
ENST00000612647.3
ENST00000625949.1
CDS CCA 72 bp CTAGTGGCGAAGTTTGGAGCCAGACCCTGCTCTCTCTaGGGGAGGACGGACAGGGACAGCCAGATCCCAGAG +
Preference number: 6 (lower is better)
Translates to: LVAKFGARPCSL*GRTDRDSQIPE
Trigger: CTCTGGGATCTGGCTGTCCCTGTCCGTCCTCCCCCAGAGAGAGCAGGGTCTGGCTCCAAACTTCGCCACTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553883.1
ENST00000625368.1
CDS CCA 72 bp TCCCTGCAGGAGGCAGTAGAGCCTAGTGGCGAAGTTTaGAGCCAGACCCTGCTCTCTCTGGGGGAGGACGGA +
Preference number: 6 (lower is better)
Translates to: SLQEAVEPSGEV*SQTLLSLGEDG
Trigger: TCCGTCCTCCCCCAGAGAGAGCAGGGTCTGGCTCCAAACTTCGCCACTAGGCTCTACTGCCTCCTGCAGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000553883.1
ENST00000625368.1
CDS CCA 72 bp GCCGCGGGTCAACCATTCTCACCCCACTGGGCAGGGTaGGTCGGCTGCCGTCTCCGCTTTACAGATAAGGAA +
Preference number: 6 (lower is better)
Translates to: AAGQPFSPHWAG*VGCRLRFTDKE
Trigger: TTCCTTATCTGTAAAGCGGAGACGGCAGCCGACCCACCCTGCCCAGTGGGGTGAGAATGGTTGACCCGCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553883.1
ENST00000625368.1
CDS CAA 72 bp CCTCCGCTCACCAGGATCTGCATGACCTCCAGGTCATaGCGAGACACAGACTCGTGCAGAGCGGTCCAGCCG +
Preference number: 6 (lower is better)
Translates to: PPLTRICMTSRS*RDTDSCRAVQP
Trigger: CGGCTGGACCGCTCTGCACGAGTCTGTGTCTCGCAATGACCTGGAGGTCATGCAGATCCTGGTGAGCGGAGG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000555507.5
ENST00000556062.5
ENST00000612647.3
ENST00000626017.2
ENST00000626296.2
ENST00000629617.2
CDS CAA 72 bp ATGCAGACGCGGTGGCCTCAGCAGTGGTTGGGCCCCTaGTCTTGTCCGCTAGGCTCTGCTCGATGGCCATCT +
Preference number: 6 (lower is better)
Translates to: MQTRWPQQWLGP*SCPLGSARWPS
Trigger: AGATGGCCATCGAGCAGAGCCTAGCGGACAAGACAAGGGGCCCAACCACTGCTGAGGCCACCGCGTCTGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000555019.6
ENST00000557613.1
ENST00000612647.3
ENST00000625949.1
CDS CAA 72 bp GGTTGGTACATGCAGACGCGGTGGCCTCAGCAGTGGTaGGGCCCCTTGTCTTGTCCGCTAGGCTCTGCTCGA +
Preference number: 6 (lower is better)
Translates to: GWYMQTRWPQQW*GPLSCPLGSAR
Trigger: TCGAGCAGAGCCTAGCGGACAAGACAAGGGGCCCAACCACTGCTGAGGCCACCGCGTCTGCATGTACCAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000555019.6
ENST00000557613.1
ENST00000612647.3
ENST00000625949.1
CDS CAA 90 bp GTACATGCAGACGCGGTGGCCTCAGCAGTGGTTGGGCCCCTTGTCTaGTCCGCTAGGCTCTGCTCGATGGCCATCTGCACCAGTTCATCC +
Preference number: 6 (lower is better)
Translates to: VHADAVASAVVGPLV*SARLCSMAICTSSS
Trigger: GGATGAACTGGTGCAGATGGCCATCGAGCAGAGCCTAGCGGACAAGACAAGGGGCCCAACCACTGCTGAGGCCACCGCGTCTGCATGTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000555019.6
ENST00000557613.1
ENST00000612647.3
ENST00000625949.1
CDS CAA 90 bp GGTTGGTACATGCAGACGCGGTGGCCTCAGCAGTGGTTGGGCCCCTaGTCTTGTCCGCTAGGCTCTGCTCGATGGCCATCTGCACCAGTT +
Preference number: 6 (lower is better)
Translates to: GWYMQTRWPQQWLGP*SCPLGSARWPSAPV
Trigger: AACTGGTGCAGATGGCCATCGAGCAGAGCCTAGCGGACAAGACAAGGGGCCCAACCACTGCTGAGGCCACCGCGTCTGCATGTACCAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000555019.6
ENST00000557613.1
ENST00000612647.3
ENST00000625949.1
CDS CAA 90 bp TATCAAGGGGTCCGCAGGCCTGGTCCATGGGTAGAAATGGGCAGGTaGGCGGTTGGTACATGCAGACGCGGTGGCCTCAGCAGTGGTTGG +
Preference number: 6 (lower is better)
Translates to: YQGVRRPGPWVEMGR*AVGTCRRGGLSSGW
Trigger: CCAACCACTGCTGAGGCCACCGCGTCTGCATGTACCAACCGCCAACCTGCCCATTTCTACCCATGGACCAGGCCTGCGGACCCCTTGATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557613.1
ENST00000625949.1
CDS CAA 90 bp CTCAGGAGGTGCAGTGGACCTGGTCCATGGGTAGAAATGGGCAGGTaGGCGGTTGGTACATGCAGACGCGGTGGCCTCAGCAGTGGTTGG +
Preference number: 6 (lower is better)
Translates to: LRRCSGPGPWVEMGR*AVGTCRRGGLSSGW
Trigger: CCAACCACTGCTGAGGCCACCGCGTCTGCATGTACCAACCGCCAACCTGCCCATTTCTACCCATGGACCAGGTCCACTGCACCTCCTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555019.6
ENST00000612647.3
CDS TCA 72 bp CCAACTGTCCACTCTGGGCGGCCACGAACAAGGGGGTaGTGCCGTAGGCGTTCTTGGATTCCACCTTGGCTC +
Preference number: 6 (lower is better)
Translates to: PTVHSGRPRTRG*CRRRSWIPPWL
Trigger: GAGCCAAGGTGGAATCCAAGAACGCCTACGGCATCACCCCCTTGTTCGTGGCCGCCCAGAGTGGACAGTTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000555507.5
ENST00000556062.5
ENST00000612647.3
ENST00000626017.2
ENST00000626296.2
ENST00000629617.2
CDS GCA 72 bp ACGTTGCCAAGTAAACGGCTGTTTCCTCCTGCAGGGTaGGCTGGTCGATGGTCCCTGGGTACGCTCGCTGCA +
Preference number: 6 (lower is better)
Translates to: TLPSKRLFPPAG*AGRWSLGTLAA
Trigger: TGCAGCGAGCGTACCCAGGGACCATCGACCAGCGCACCCTGCAGGAGGAAACAGCCGTTTACTTGGCAACGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000555287.1
ENST00000555507.5
ENST00000612647.3
ENST00000626296.2
ENST00000628500.1
ENST00000629617.2
CDS GCA 72 bp TGTGCTGCACCAGAATCTTCACGGCCTCCGCGTTCTTaGGCTCGCAGGCTTTGTAGAGCGGTGTCTCTCGGG +
Preference number: 6 (lower is better)
Translates to: CAAPESSRPPRS*ARRLCRAVSLG
Trigger: CCCGAGAGACACCGCTCTACAAAGCCTGCGAGCGCAAGAACGCGGAGGCCGTGAAGATTCTGGTGCAGCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000555507.5
ENST00000612647.3
ENST00000626296.2
ENST00000629617.2
CDS GCA 72 bp CAGCCGCGGTTGCAGCGGTGGTTGGTGTCTGCATTGTaGTGCACCAGAATCTTCACGGCCTCCGCGTTCTTG +
Preference number: 6 (lower is better)
Translates to: QPRLQRWLVSAL*CTRIFTASAFL
Trigger: CAAGAACGCGGAGGCCGTGAAGATTCTGGTGCAGCACAATGCAGACACCAACCACCGCTGCAACCGCGGCTG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000555507.5
ENST00000556062.5
ENST00000612647.3
ENST00000626017.2
ENST00000626296.2
ENST00000629617.2
CDS GCA 72 bp TCCTCGCTCAGGCTGCTGTACAGGCTGTACTCCTCCTaGCCAATGGTACACTGGCTGCCCCGAGTGCTGATC +
Preference number: 6 (lower is better)
Translates to: SSLRLLYRLYSS*PMVHWLPRVLI
Trigger: GATCAGCACTCGGGGCAGCCAGTGTACCATTGGGCAGGAGGAGTACAGCCTGTACAGCAGCCTGAGCGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000555019.6
ENST00000557613.1
ENST00000612647.3
ENST00000625949.1
CDS GCA 72 bp GCAGTGGTTGGGCCCCTTGTCTTGTCCGCTAGGCTCTaGTCGATGGCCATCTGCACCAGTTCATCCTCGCTC +
Preference number: 6 (lower is better)
Translates to: AVVGPLVLSARL*SMAICTSSSSL
Trigger: GAGCGAGGATGAACTGGTGCAGATGGCCATCGAGCAGAGCCTAGCGGACAAGACAAGGGGCCCAACCACTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000555019.6
ENST00000557613.1
ENST00000612647.3
ENST00000625949.1
CDS CCA 72 bp GCTGTATTTCTGCATGACCCCTTGGAACAAGCCCATTaGGGCCCGGGCCGGCGAACTCTCAGGAGGTGCAGT +
Preference number: 6 (lower is better)
Translates to: AVFLHDPLEQAH*GPGRRTLRRCS
Trigger: ACTGCACCTCCTGAGAGTTCGCCGGCCCGGGCCCCAATGGGCTTGTTCCAAGGGGTCATGCAGAAATACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000555287.1
ENST00000556793.1
ENST00000612647.3
ENST00000628228.1
ENST00000628500.1
ENST00000629617.2
CDS CCA 72 bp GACTCGTGCAGAGCGGTCCAGCCGCGGTTGCAGCGGTaGTTGGTGTCTGCATTGTGCTGCACCAGAATCTTC +
Preference number: 6 (lower is better)
Translates to: DSCRAVQPRLQR*LVSALCCTRIF
Trigger: GAAGATTCTGGTGCAGCACAATGCAGACACCAACCACCGCTGCAACCGCGGCTGGACCGCTCTGCACGAGTC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000555507.5
ENST00000556062.5
ENST00000612647.3
ENST00000626017.2
ENST00000626296.2
ENST00000629617.2
CDS CCA 72 bp TGGAGGCGATGTGCAGCGGGAGCAAGCCGTCCTTGTTaGTCTTGTTGGCGTCGGCACCCTGTGACAGCAGAA +
Preference number: 6 (lower is better)
Translates to: WRRCAAGASRPC*SCWRRHPVTAE
Trigger: TTCTGCTGTCACAGGGTGCCGACGCCAACAAGACCAACAAGGACGGCTTGCTCCCGCTGCACATCGCCTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000555507.5
ENST00000612647.3
ENST00000626296.2
ENST00000629617.2
CDS CCA 72 bp CTGTACAGGCTGTACTCCTCCTGCCCAATGGTACACTaGCTGCCCCGAGTGCTGATCTGCGTGGCCATCCTC +
Preference number: 6 (lower is better)
Translates to: LYRLYSSCPMVH*LPRVLICVAIL
Trigger: GAGGATGGCCACGCAGATCAGCACTCGGGGCAGCCAGTGTACCATTGGGCAGGAGGAGTACAGCCTGTACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000555019.6
ENST00000557613.1
ENST00000612647.3
ENST00000625949.1
CDS CCA 72 bp TTGGGCCCCTTGTCTTGTCCGCTAGGCTCTGCTCGATaGCCATCTGCACCAGTTCATCCTCGCTCAGGCTGC +
Preference number: 6 (lower is better)
Translates to: LGPLSCPLGSAR*PSAPVHPRSGC
Trigger: GCAGCCTGAGCGAGGATGAACTGGTGCAGATGGCCATCGAGCAGAGCCTAGCGGACAAGACAAGGGGCCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000555019.6
ENST00000557613.1
ENST00000612647.3
ENST00000625949.1
CDS CCA 72 bp GCCTGGTCCATGGGTAGAAATGGGCAGGTTGGCGGTTaGTACATGCAGACGCGGTGGCCTCAGCAGTGGTTG +
Preference number: 6 (lower is better)
Translates to: AWSMGRNGQVGG*YMQTRWPQQWL
Trigger: CAACCACTGCTGAGGCCACCGCGTCTGCATGTACCAACCGCCAACCTGCCCATTTCTACCCATGGACCAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557613.1
ENST00000625949.1
CDS CAA 72 bp TCGTGCAGAGCGGTCCAGCCGCGGTTGCAGCGGTGGTaGGTGTCTGCATTGTGCTGCACCAGAATCTTCACG +
Preference number: 6 (lower is better)
Translates to: SCRAVQPRLQRW*VSALCCTRIFT
Trigger: CGTGAAGATTCTGGTGCAGCACAATGCAGACACCAACCACCGCTGCAACCGCGGCTGGACCGCTCTGCACGA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000555507.5
ENST00000556062.5
ENST00000612647.3
ENST00000626017.2
ENST00000626296.2
ENST00000629617.2
CDS CAA 72 bp GCGATGTGCAGCGGGAGCAAGCCGTCCTTGTTGGTCTaGTTGGCGTCGGCACCCTGTGACAGCAGAAACTCC +
Preference number: 6 (lower is better)
Translates to: AMCSGSKPSLLV*LASAPCDSRNS
Trigger: GGAGTTTCTGCTGTCACAGGGTGCCGACGCCAACAAGACCAACAAGGACGGCTTGCTCCCGCTGCACATCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000555507.5
ENST00000612647.3
ENST00000626296.2
ENST00000629617.2
CDS CAA 72 bp TTGGAGGCGATGTGCAGCGGGAGCAAGCCGTCCTTGTaGGTCTTGTTGGCGTCGGCACCCTGTGACAGCAGA +
Preference number: 6 (lower is better)
Translates to: LEAMCSGSKPSL*VLLASAPCDSR
Trigger: TCTGCTGTCACAGGGTGCCGACGCCAACAAGACCAACAAGGACGGCTTGCTCCCGCTGCACATCGCCTCCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000555507.5
ENST00000612647.3
ENST00000626296.2
ENST00000629617.2
CDS CAA 72 bp TTCTTGGAGGCGATGTGCAGCGGGAGCAAGCCGTCCTaGTTGGTCTTGTTGGCGTCGGCACCCTGTGACAGC +
Preference number: 6 (lower is better)
Translates to: FLEAMCSGSKPS*LVLLASAPCDS
Trigger: GCTGTCACAGGGTGCCGACGCCAACAAGACCAACAAGGACGGCTTGCTCCCGCTGCACATCGCCTCCAAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000555507.5
ENST00000612647.3
ENST00000626296.2
ENST00000629617.2
CDS CAA 72 bp TTGTGCTGCACCAGAATCTTCACGGCCTCCGCGTTCTaGCGCTCGCAGGCTCGCTGCAGGACTTTCAGGCAG +
Preference number: 6 (lower is better)
Translates to: LCCTRIFTASAF*RSQARCRTFRQ
Trigger: CTGCCTGAAAGTCCTGCAGCGAGCCTGCGAGCGCAAGAACGCGGAGGCCGTGAAGATTCTGGTGCAGCACAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556062.5
ENST00000626017.2
CDS CAA 72 bp TGCAGTGGACCTGGTCCATGGGTAGAAATGGGCAGGTaGGCGGTTGGTACATGCAGACGCGGTGGCCTCAGC +
Preference number: 6 (lower is better)
Translates to: CSGPGPWVEMGR*AVGTCRRGGLS
Trigger: GCTGAGGCCACCGCGTCTGCATGTACCAACCGCCAACCTGCCCATTTCTACCCATGGACCAGGTCCACTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555019.6
ENST00000612647.3
CDS CAA 90 bp TTGGAGGCGATGTGCAGCGGGAGCAAGCCGTCCTTGTTGGTCTTGTaGGCGTCGGCACCCTGTGACAGCAGAAACTCCACCACCTCCTCA +
Preference number: 6 (lower is better)
Translates to: LEAMCSGSKPSLLVL*ASAPCDSRNSTTSS
Trigger: TGAGGAGGTGGTGGAGTTTCTGCTGTCACAGGGTGCCGACGCCAACAAGACCAACAAGGACGGCTTGCTCCCGCTGCACATCGCCTCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000555507.5
ENST00000612647.3
ENST00000626296.2
ENST00000629617.2
CDS CAA 90 bp TTCTTGGAGGCGATGTGCAGCGGGAGCAAGCCGTCCTTGTTGGTCTaGTTGGCGTCGGCACCCTGTGACAGCAGAAACTCCACCACCTCC +
Preference number: 6 (lower is better)
Translates to: FLEAMCSGSKPSLLV*LASAPCDSRNSTTS
Trigger: GGAGGTGGTGGAGTTTCTGCTGTCACAGGGTGCCGACGCCAACAAGACCAACAAGGACGGCTTGCTCCCGCTGCACATCGCCTCCAAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000555507.5
ENST00000612647.3
ENST00000626296.2
ENST00000629617.2
CDS CAA 90 bp TTGCCCTTCTTGGAGGCGATGTGCAGCGGGAGCAAGCCGTCCTTGTaGGTCTTGTTGGCGTCGGCACCCTGTGACAGCAGAAACTCCACC +
Preference number: 6 (lower is better)
Translates to: LPFLEAMCSGSKPSL*VLLASAPCDSRNST
Trigger: GGTGGAGTTTCTGCTGTCACAGGGTGCCGACGCCAACAAGACCAACAAGGACGGCTTGCTCCCGCTGCACATCGCCTCCAAGAAGGGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000555507.5
ENST00000612647.3
ENST00000626296.2
ENST00000629617.2
CDS CCA 72 bp CAAGGTGACATTCTTCACCCAGGAGGATGTGAGCCGTaGTCGGCAGGTCCCAGGATGAAAGGGGCTCAGGCT +
Preference number: 6 (lower is better)
Translates to: QGDILHPGGCEP*SAGPRMKGAQA
Trigger: AGCCTGAGCCCCTTTCATCCTGGGACCTGCCGACCACGGCTCACATCCTCCTGGGTGAAGAATGTCACCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315988.8
ENST00000629617.2
CDS CCA 72 bp TGTGCAGCGGGAGCAAGCCGTCCTTGTTGGTCTTGTTaGCGTCGGCACCCTGTGACAGCAGAAACTCCACCA +
Preference number: 6 (lower is better)
Translates to: CAAGASRPCWSC*RRHPVTAETPP
Trigger: TGGTGGAGTTTCTGCTGTCACAGGGTGCCGACGCCAACAAGACCAACAAGGACGGCTTGCTCCCGCTGCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000555507.5
ENST00000612647.3
ENST00000626296.2
ENST00000629617.2
CDS CCA 72 bp GCAGCAGCATCTGCACGATCCTGTAGTTGCCCTTCTTaGAGGCGATGTGCAGCGGGAGCAAGCCGTCCTTGT +
Preference number: 6 (lower is better)
Translates to: AAASARSCSCPS*RRCAAGASRPC
Trigger: ACAAGGACGGCTTGCTCCCGCTGCACATCGCCTCCAAGAAGGGCAACTACAGGATCGTGCAGATGCTGCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000555507.5
ENST00000612647.3
ENST00000626296.2
ENST00000629617.2
CDS CCA 72 bp ACCTGGTCCATGGGTAGAAATGGGCAGGTTGGCGGTTaGTACATGCAGACGCGGTGGCCTCAGCAGTGGTTG +
Preference number: 6 (lower is better)
Translates to: TWSMGRNGQVGG*YMQTRWPQQWL
Trigger: CAACCACTGCTGAGGCCACCGCGTCTGCATGTACCAACCGCCAACCTGCCCATTTCTACCCATGGACCAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555019.6
ENST00000612647.3
CDS CAA 72 bp TATGCGGCCTCGTGCAGCGGCAGCCAGCCCTCCTTGTaGGGCTCTGCGAGATTCTTCCCTTCCTTGATCATG +
Preference number: 6 (lower is better)
Translates to: YAASCSGSQPSL*GSARFFPSLIM
Trigger: CATGATCAAGGAAGGGAAGAATCTCGCAGAGCCCAACAAGGAGGGCTGGCTGCCGCTGCACGAGGCCGCATA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000555287.1
ENST00000555507.5
ENST00000556062.5
ENST00000556793.1
ENST00000557613.1
ENST00000612647.3
ENST00000625949.1
ENST00000626017.2
ENST00000626296.2
ENST00000628228.1
ENST00000628500.1
ENST00000629617.2
CDS CAA 72 bp ATGTGCAGCGGGAGCAAGCCGTCCTTGTTGGTCTTGTaGGCGTCGGCACCCTGTGACAGCAGAAACTCCACC +
Preference number: 6 (lower is better)
Translates to: MCSGSKPSLLVL*ASAPCDSRNST
Trigger: GGTGGAGTTTCTGCTGTCACAGGGTGCCGACGCCAACAAGACCAACAAGGACGGCTTGCTCCCGCTGCACAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000555507.5
ENST00000612647.3
ENST00000626296.2
ENST00000629617.2
CDS GCA 72 bp CGATGGCCATCTGCACCAGTTCATCCTCGCTCAGGCTaGTGTACAGGCTGTACTCCTCCTGCCCAATGGTAC +
Preference number: 6 (lower is better)
Translates to: RWPSAPVHPRSG*CTGCTPPAQWY
Trigger: GTACCATTGGGCAGGAGGAGTACAGCCTGTACAGCAGCCTGAGCGAGGATGAACTGGTGCAGATGGCCATCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000555019.6
ENST00000557613.1
ENST00000612647.3
ENST00000625949.1
CDS GCA 72 bp CTTGTCTTGTCCGCTAGGCTCTGCTCGATGGCCATCTaGACCAGTTCATCCTCGCTCAGGCTGCTGTACAGG +
Preference number: 6 (lower is better)
Translates to: LVLSARLCSMAI*TSSSSLRLLYR
Trigger: CCTGTACAGCAGCCTGAGCGAGGATGAACTGGTGCAGATGGCCATCGAGCAGAGCCTAGCGGACAAGACAAG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000555019.6
ENST00000557613.1
ENST00000612647.3
ENST00000625949.1
CDS GCA 72 bp ACGGACAGGGACAGCCAGATCCCAGAGCCCACCGTGTaGCAGGAGGCTCCTAAAGGCTTTACAAGTGCGATT +
Preference number: 6 (lower is better)
Translates to: TDRDSQIPEPTV*QEAPKGFTSAI
Trigger: AATCGCACTTGTAAAGCCTTTAGGAGCCTCCTGGCACACGGTGGGCTCTGGGATCTGGCTGTCCCTGTCCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553883.1
ENST00000625368.1
CDS CCA 72 bp TTGAACAAGCTGCTGCTGTATTTCTGCATGACCCCTTaGAACAAGCCCATTGGGGCCCGGGCCGGCGAACTC +
Preference number: 6 (lower is better)
Translates to: LNKLLLYFCMTP*NKPIGARAGEL
Trigger: GAGTTCGCCGGCCCGGGCCCCAATGGGCTTGTTCCAAGGGGTCATGCAGAAATACAGCAGCAGCTTGTTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000555287.1
ENST00000556793.1
ENST00000612647.3
ENST00000628228.1
ENST00000628500.1
ENST00000629617.2
CDS CAA 90 bp GGCAGCCAGCCCTCCTTGTTGGGCTCTGCGAGATTCTTCCCTTCCTaGATCATGGTCTTCAAGGCCTCTTCATCGCCATCCTTGATGGCC +
Preference number: 6 (lower is better)
Translates to: GSQPSLLGSARFFPS*IMVFKASSSPSLMA
Trigger: GGCCATCAAGGATGGCGATGAAGAGGCCTTGAAGACCATGATCAAGGAAGGGAAGAATCTCGCAGAGCCCAACAAGGAGGGCTGGCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000555287.1
ENST00000555507.5
ENST00000556062.5
ENST00000556793.1
ENST00000557613.1
ENST00000612647.3
ENST00000625949.1
ENST00000626017.2
ENST00000626296.2
ENST00000628228.1
ENST00000628500.1
ENST00000629617.2
CDS TCA 72 bp ATTCCACCTTGGCTCCTCCGCTCACCAGGATCTGCATaGCCTCCAGGTCATTGCGAGACACAGACTCGTGCA +
Preference number: 6 (lower is better)
Translates to: IPPWLLRSPGSA*PPGHCETQTRA
Trigger: TGCACGAGTCTGTGTCTCGCAATGACCTGGAGGTCATGCAGATCCTGGTGAGCGGAGGAGCCAAGGTGGAAT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000555507.5
ENST00000556062.5
ENST00000612647.3
ENST00000626017.2
ENST00000626296.2
ENST00000629617.2
CDS GCA 72 bp AGCTGGGAGGTCTTGAACAAGCTGCTGCTGTATTTCTaGATGACCCCTTGGAACAAGCCCATTGGGGCCCGG +
Preference number: 6 (lower is better)
Translates to: SWEVLNKLLLYF*MTPWNKPIGAR
Trigger: CCGGGCCCCAATGGGCTTGTTCCAAGGGGTCATGCAGAAATACAGCAGCAGCTTGTTCAAGACCTCCCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000555287.1
ENST00000556793.1
ENST00000612647.3
ENST00000628228.1
ENST00000628500.1
ENST00000629617.2
CDS GCA 72 bp CTCGTGCAGCGGCAGCCAGCCCTCCTTGTTGGGCTCTaGGAGATTCTTCCCTTCCTTGATCATGGTCTTCAA +
Preference number: 6 (lower is better)
Translates to: LVQRQPALLVGL*EILPFLDHGLQ
Trigger: TTGAAGACCATGATCAAGGAAGGGAAGAATCTCGCAGAGCCCAACAAGGAGGGCTGGCTGCCGCTGCACGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000555287.1
ENST00000555507.5
ENST00000556062.5
ENST00000556793.1
ENST00000557613.1
ENST00000612647.3
ENST00000625949.1
ENST00000626017.2
ENST00000626296.2
ENST00000628228.1
ENST00000628500.1
ENST00000629617.2
CDS GCA 72 bp TTGGATTCCACCTTGGCTCCTCCGCTCACCAGGATCTaGATGACCTCCAGGTCATTGCGAGACACAGACTCG +
Preference number: 6 (lower is better)
Translates to: LDSTLAPPLTRI*MTSRSLRDTDS
Trigger: CGAGTCTGTGTCTCGCAATGACCTGGAGGTCATGCAGATCCTGGTGAGCGGAGGAGCCAAGGTGGAATCCAA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000555507.5
ENST00000556062.5
ENST00000612647.3
ENST00000626017.2
ENST00000626296.2
ENST00000629617.2
CDS GCA 72 bp CAACCATTCTCACCCCACTGGGCAGGGTGGGTCGGCTaGCGTCTCCGCTTTACAGATAAGGAAACTGAAGCT +
Preference number: 6 (lower is better)
Translates to: QPFSPHWAGWVG*RLRFTDKETEA
Trigger: AGCTTCAGTTTCCTTATCTGTAAAGCGGAGACGGCAGCCGACCCACCCTGCCCAGTGGGGTGAGAATGGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553883.1
ENST00000625368.1
CDS CAA 72 bp TTTATCAAGGGGTCCGCAGGCGCCAGCTGGGAGGTCTaGAACAAGCTGCTGCTGTATTTCTGCATGACCCCT +
Preference number: 6 (lower is better)
Translates to: FIKGSAGASWEV*NKLLLYFCMTP
Trigger: AGGGGTCATGCAGAAATACAGCAGCAGCTTGTTCAAGACCTCCCAGCTGGCGCCTGCGGACCCCTTGATAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000555287.1
ENST00000556793.1
ENST00000612647.3
ENST00000628228.1
ENST00000628500.1
ENST00000629617.2
CDS CAA 72 bp TTGATCATGGTCTTCAAGGCCTCTTCATCGCCATCCTaGATGGCCTTTATCAAGGGGTCCGCAGGCGCCAGC +
Preference number: 6 (lower is better)
Translates to: LIMVFKASSSPS*MAFIKGSAGAS
Trigger: GCTGGCGCCTGCGGACCCCTTGATAAAGGCCATCAAGGATGGCGATGAAGAGGCCTTGAAGACCATGATCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000555287.1
ENST00000556793.1
ENST00000612647.3
ENST00000628228.1
ENST00000628500.1
ENST00000629617.2
CDS TCA 72 bp ATTTGGAGGAATTGCCTGGAAGGCCCCCAAACCCAATaGATGTCCAACCTCCTCCCTGCAGGAGGCAGTAGA +
Preference number: 6 (lower is better)
Translates to: IWRNCLEGPQTQ*MSNLLPAGGSR
Trigger: TCTACTGCCTCCTGCAGGGAGGAGGTTGGACATTCATTGGGTTTGGGGGCCTTCCAGGCAATTCCTCCAAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000553883.1
ENST00000625368.1
CDS TCA 72 bp TGGGCTTCAGACCCAGAACCCTTGGCCTCCGAAGTCTaGGTTCTTAAAAACCTCAGCCAGACTGCACTAGGG +
Preference number: 6 (lower is better)
Translates to: WASDPEPLASEV*VLKNLSQTALG
Trigger: CCCTAGTGCAGTCTGGCTGAGGTTTTTAAGAACTCAGACTTCGGAGGCCAAGGGTTCTGGGTCTGAAGCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000553883.1
ENST00000625368.1
CDS GCA 72 bp GGCTCTGAACCAAAGCAGATGGCCGGGTCCTCTGTGTaGTGGACACAGCTGCTGTGTCTCCGGATTATTTTT +
Preference number: 6 (lower is better)
Translates to: GSEPKQMAGSSV*WTQLLCLRIIF
Trigger: AAAAATAATCCGGAGACACAGCAGCTGTGTCCAGCACACAGAGGACCCGGCCATCTGCTTTGGTTCAGAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315988.8
ENST00000629617.2
CDS GCA 72 bp GGGTGCAGAGCAGGAGTGAAAGAGGGAAAAGTACTCTaGATAGGAGAAGCGGGTCATGGCTTCAGGCAGGAA +
Preference number: 6 (lower is better)
Translates to: GCRAGVKEGKVL*IGEAGHGFRQE
Trigger: TTCCTGCCTGAAGCCATGACCCGCTTCTCCTATGCAGAGTACTTTTCCCTCTTTCACTCCTGCTCTGCACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315988.8
ENST00000556793.1
ENST00000628228.1
ENST00000629617.2
CDS GCA 72 bp TCCTGTTTGGAGGTTGCACTGAGGAAGCTGCAATCCTaGCTTCCGTTCCTCCGGGTGCATCGAATACAGACT +
Preference number: 6 (lower is better)
Translates to: SCLEVALRKLQS*LPFLRVHRIQT
Trigger: AGTCTGTATTCGATGCACCCGGAGGAACGGAAGGCAGGATTGCAGCTTCCTCAGTGCAACCTCCAAACAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000555374.1
ENST00000612647.3
ENST00000626322.1
CDS CCA 72 bp CAGATGCCGGTGAAGCAACAGACCCAGCAAGGACGATaGGAAACTGATCAGATAAGTCCTGAGGTCCCCATC +
Preference number: 6 (lower is better)
Translates to: QMPVKQQTQQGR*ETDQISPEVPI
Trigger: GATGGGGACCTCAGGACTTATCTGATCAGTTTCCCATCGTCCTTGCTGGGTCTGTTGCTTCACCGGCATCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555507.5
ENST00000626296.2
CDS CAA 72 bp CCCTCCTTGTTGGGCTCTGCGAGATTCTTCCCTTCCTaGATCATGGTCTTCAAGGCCTCTTCATCGCCATCC +
Preference number: 6 (lower is better)
Translates to: PSLLGSARFFPS*IMVFKASSSPS
Trigger: GGATGGCGATGAAGAGGCCTTGAAGACCATGATCAAGGAAGGGAAGAATCTCGCAGAGCCCAACAAGGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000555287.1
ENST00000555507.5
ENST00000556062.5
ENST00000556793.1
ENST00000557613.1
ENST00000612647.3
ENST00000625949.1
ENST00000626017.2
ENST00000626296.2
ENST00000628228.1
ENST00000628500.1
ENST00000629617.2
CDS CAA 72 bp TTGATCATGGTCTTCAAGGCCTCTTCATCGCCATCCTaGATGGCCTTTATCAAGGGGTCCGCAGGCCTGGTC +
Preference number: 6 (lower is better)
Translates to: LIMVFKASSSPS*MAFIKGSAGLV
Trigger: GACCAGGCCTGCGGACCCCTTGATAAAGGCCATCAAGGATGGCGATGAAGAGGCCTTGAAGACCATGATCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557613.1
ENST00000625949.1
CDS CAA 72 bp AGGCTAAGCGCTGTTGCCCATTGCCAGCTCAGTTATTaGGAGGAATTGCCTGGAAGGCCCCCAAACCCAATG +
Preference number: 6 (lower is better)
Translates to: RLSAVAHCQLSY*EELPGRPPNPM
Trigger: CATTGGGTTTGGGGGCCTTCCAGGCAATTCCTCCAAATAACTGAGCTGGCAATGGGCAACAGCGCTTAGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000553883.1
ENST00000625368.1
CDS TCA 72 bp CCTCCTTGTTGGGCTCTGCGAGATTCTTCCCTTCCTTaGTCATGGTCTTCAAGGCCTCTTCATCGCCATCCT +
Preference number: 6 (lower is better)
Translates to: PPCWALRDSSLP*SWSSRPLHRHP
Trigger: AGGATGGCGATGAAGAGGCCTTGAAGACCATGATCAAGGAAGGGAAGAATCTCGCAGAGCCCAACAAGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000315988.8
ENST00000555019.6
ENST00000555287.1
ENST00000555507.5
ENST00000556062.5
ENST00000556793.1
ENST00000557613.1
ENST00000612647.3
ENST00000625949.1
ENST00000626017.2
ENST00000626296.2
ENST00000628228.1
ENST00000628500.1
ENST00000629617.2
CDS TCA 72 bp CCAGCCACTTCCTCCAGCGTGAGCAGCACTTCCTCCTaGCTCTCAGACTCTGTGGTTATTAATGGTGTCAGA +
Preference number: 6 (lower is better)
Translates to: PATSSSVSSTSS*LSDSVVINGVR
Trigger: TCTGACACCATTAATAACCACAGAGTCTGAGAGTCAGGAGGAAGTGCTGCTCACGCTGGAGGAAGTGGCTGG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555507.5
ENST00000626296.2
CDS CCA 72 bp TGCCCATTGCCAGCTCAGTTATTTGGAGGAATTGCCTaGAAGGCCCCCAAACCCAATGAATGTCCAACCTCC +
Preference number: 6 (lower is better)
Translates to: CPLPAQLFGGIA*KAPKPNECPTS
Trigger: GGAGGTTGGACATTCATTGGGTTTGGGGGCCTTCCAGGCAATTCCTCCAAATAACTGAGCTGGCAATGGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000553883.1
ENST00000625368.1
CDS CAA 72 bp TTGATCATGGTCTTCAAGGCCTCTTCATCGCCATCCTaGATGGCCTTTATCAAGGGGTCCGCAGGCCTCATC +
Preference number: 6 (lower is better)
Translates to: LIMVFKASSSPS*MAFIKGSAGLI
Trigger: GATGAGGCCTGCGGACCCCTTGATAAAGGCCATCAAGGATGGCGATGAAGAGGCCTTGAAGACCATGATCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000555507.5
ENST00000556062.5
ENST00000626017.2
ENST00000626296.2
CDS TCA 72 bp CTGTGGTTATTAATGGTGTCAGAGCACAGATGCCGGTaGAGCAACAGACCCAGCAAGGACGATGGGAAACTG +
Preference number: 6 (lower is better)
Translates to: LWLLMVSEHRCR*SNRPSKDDGKL
Trigger: CAGTTTCCCATCGTCCTTGCTGGGTCTGTTGCTTCACCGGCATCTGTGCTCTGACACCATTAATAACCACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555507.5
ENST00000626296.2
CDS TCA 72 bp GTTATACATCTCAGATTTCCTGTTTGGAGGTTGCACTaGGGAAGCTGCAATCCTGCCTTCCGTTCCTCCGGG +
Preference number: 6 (lower is better)
Translates to: VIHLRFPVWRLH*GSCNPAFRSSG
Trigger: CCCGGAGGAACGGAAGGCAGGATTGCAGCTTCCTCAGTGCAACCTCCAAACAGGAAATCTGAGATGTATAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000555374.1
ENST00000556337.1
ENST00000612647.3
ENST00000626322.1
ENST00000626794.1
CDS CCA 72 bp GCAAGGTGTCTAGGAGTTTTATACGGTATTTCCCAATaGCCTTTCGAACCCGCAGTCGGCAAAGGTGAGCCA +
Preference number: 6 (lower is better)
Translates to: ARCLGVLYGISQ*PFEPAVGKGEP
Trigger: TGGCTCACCTTTGCCGACTGCGGGTTCGAAAGGCCATTGGGAAATACCGTATAAAACTCCTAGACACCTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315988.8
ENST00000553883.1
ENST00000555019.6
ENST00000612647.3
ENST00000625368.1
ENST00000629617.2
CDS GCA 72 bp GTCTATGCCTCTCAGATCCACTTTTGGGGAGGCTTCTaGATCAATAGTCCCATTTCCCAGATGGAGAAGGTG +
Preference number: 6 (lower is better)
Translates to: VYASQIHFWGGF*INSPISQMEKV
Trigger: CACCTTCTCCATCTGGGAAATGGGACTATTGATGCAGAAGCCTCCCCAAAAGTGGATCTGAGAGGCATAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000555507.5
ENST00000556062.5
ENST00000626017.2
ENST00000626296.2
CDS CCA 72 bp GAGAACCACGATGTCTATGCCTCTCAGATCCACTTTTaGGGAGGCTTCTGCATCAATAGTCCCATTTCCCAG +
Preference number: 6 (lower is better)
Translates to: ENHDVYASQIHF*GGFCINSPISQ
Trigger: CTGGGAAATGGGACTATTGATGCAGAAGCCTCCCCAAAAGTGGATCTGAGAGGCATAGACATCGTGGTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000555507.5
ENST00000556062.5
ENST00000626017.2
ENST00000626296.2
CDS CCA 72 bp TCTGAAACGCTGTCCTTTGAAGCAGGGAGTTTATTTTaGGGCCACCGCATGACCAACGTTGACAAGCCAAAC +
Preference number: 6 (lower is better)
Translates to: SETLSFEAGSLF*GHRMTNVDKPN
Trigger: GTTTGGCTTGTCAACGTTGGTCATGCGGTGGCCCCAAAATAAACTCCCTGCTTCAAAGGACAGCGTTTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000555287.1
ENST00000555374.1
ENST00000556337.1
ENST00000612647.3
ENST00000626322.1
ENST00000626794.1
ENST00000628500.1
CDS CAA 72 bp GATGAGAAGAGTCAAGACTCTGAGAGATTAAGGGGCTaGCCCAGTCATACAGTCAGAATAGGGGAACCAGGG +
Preference number: 6 (lower is better)
Translates to: DEKSQDSERLRG*PSHTVRIGEPG
Trigger: CCCTGGTTCCCCTATTCTGACTGTATGACTGGGCAAGCCCCTTAATCTCTCAGAGTCTTGACTCTTCTCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553883.1
ENST00000625368.1
CDS CAA 90 bp CAAGAAGCTCCCACTAATTTATTTCAGGCTAAGCGCTGTTGCCCATaGCCAGCTCAGTTATTTGGAGGAATTGCCTGGAAGGCCCCCAAA +
Preference number: 6 (lower is better)
Translates to: QEAPTNLFQAKRCCP*PAQLFGGIAWKAPK
Trigger: TTTGGGGGCCTTCCAGGCAATTCCTCCAAATAACTGAGCTGGCAATGGGCAACAGCGCTTAGCCTGAAATAAATTAGTGGGAGCTTCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000553883.1
ENST00000625368.1
CDS CAA 90 bp ATTTATTTCAGGCTAAGCGCTGTTGCCCATTGCCAGCTCAGTTATTaGGAGGAATTGCCTGGAAGGCCCCCAAACCCAATGAATGTCCAA +
Preference number: 6 (lower is better)
Translates to: IYFRLSAVAHCQLSY*EELPGRPPNPMNVQ
Trigger: TTGGACATTCATTGGGTTTGGGGGCCTTCCAGGCAATTCCTCCAAATAACTGAGCTGGCAATGGGCAACAGCGCTTAGCCTGAAATAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000553883.1
ENST00000625368.1
CDS CAA 72 bp CCCACTAATTTATTTCAGGCTAAGCGCTGTTGCCCATaGCCAGCTCAGTTATTTGGAGGAATTGCCTGGAAG +
Preference number: 6 (lower is better)
Translates to: PTNLFQAKRCCP*PAQLFGGIAWK
Trigger: CTTCCAGGCAATTCCTCCAAATAACTGAGCTGGCAATGGGCAACAGCGCTTAGCCTGAAATAAATTAGTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553883.1
ENST00000625368.1
CDS GCA 72 bp AAGATGTTATACATCTCAGATTTCCTGTTTGGAGGTTaGACTGAGGAAGCTGCAATCCTGCCTTCCGTTCCT +
Preference number: 6 (lower is better)
Translates to: KMLYISDFLFGG*TEEAAILPSVP
Trigger: AGGAACGGAAGGCAGGATTGCAGCTTCCTCAGTGCAACCTCCAAACAGGAAATCTGAGATGTATAACATCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000555287.1
ENST00000555374.1
ENST00000556337.1
ENST00000612647.3
ENST00000626322.1
ENST00000626794.1
ENST00000628500.1
CDS CAA 90 bp TTGACAAGCCAAACTATAAGATGTTATACATCTCAGATTTCCTGTTaGGAGGTTGCACTGAGGAAGCTGCAATCCTGCCTTCCGTTCCTC +
Preference number: 6 (lower is better)
Translates to: LTSQTIRCYTSQISC*EVALRKLQSCLPFL
Trigger: GAGGAACGGAAGGCAGGATTGCAGCTTCCTCAGTGCAACCTCCAAACAGGAAATCTGAGATGTATAACATCTTATAGTTTGGCTTGTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000555287.1
ENST00000555374.1
ENST00000556337.1
ENST00000612647.3
ENST00000626322.1
ENST00000626794.1
ENST00000628500.1
CDS CAA 72 bp CAAACTATAAGATGTTATACATCTCAGATTTCCTGTTaGGAGGTTGCACTGAGGAAGCTGCAATCCTGCCTT +
Preference number: 6 (lower is better)
Translates to: QTIRCYTSQISC*EVALRKLQSCL
Trigger: AAGGCAGGATTGCAGCTTCCTCAGTGCAACCTCCAAACAGGAAATCTGAGATGTATAACATCTTATAGTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000555287.1
ENST00000555374.1
ENST00000556337.1
ENST00000612647.3
ENST00000626322.1
ENST00000626794.1
ENST00000628500.1