RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ASB13 (Homo sapiens)

Ensembl gene IDs: ENSG00000196372

Ensembl transcript IDs: ENST00000357700.11, ENST00000459912.5, ENST00000479033.1, ENST00000482921.1, ENST00000493897.1

Found 367 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGGCCACATCCCAGGCCGACCTTCCGTGGGCCCAGCCATTCCCTATaGGCACCGAGGGCAGTCCTGGTGCCGACCCGGAGGTGGTGGCCT +
Preference number: 1 (lower is better)
Translates to: RPHPRPTFRGPSHSL*APRAVLVPTRRWWP
Trigger: AGGCCACCACCTCCGGGTCGGCACCAGGACTGCCCTCGGTGCTCATAGGGAATGGCTGGGCCCACGGAAGGTCGGCCTGGGATGTGGCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
3UTR GCA 90 bp TCCGTGGGCCCAGCCATTCCCTATGAGCACCGAGGGCAGTCCTGGTaGCGACCCGGAGGTGGTGGCCTGCACCTGGGGCCTGTGCATCTG +
Preference number: 1 (lower is better)
Translates to: SVGPAIPYEHRGQSW*RPGGGGLHLGPVHL
Trigger: CAGATGCACAGGCCCCAGGTGCAGGCCACCACCTCCGGGTCGGCACCAGGACTGCCCTCGGTGCTCATAGGGAATGGCTGGGCCCACGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
3UTR CCA 90 bp CCTTCCGTGGGCCCAGCCATTCCCTATGAGCACCGAGGGCAGTCCTaGTGCCGACCCGGAGGTGGTGGCCTGCACCTGGGGCCTGTGCAT +
Preference number: 1 (lower is better)
Translates to: PSVGPAIPYEHRGQS*CRPGGGGLHLGPVH
Trigger: ATGCACAGGCCCCAGGTGCAGGCCACCACCTCCGGGTCGGCACCAGGACTGCCCTCGGTGCTCATAGGGAATGGCTGGGCCCACGGAAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
3UTR GCA 90 bp GGGCATCGCCTTGGGCAGCTCAGGCTCACTCTGTTCCACACTGTCTaGGGTGGGAGGCTCGGGCCGGCCTGGGTGCATCCAGTGAGTACC +
Preference number: 1 (lower is better)
Translates to: GHRLGQLRLTLFHTV*GGRLGPAWVHPVST
Trigger: GGTACTCACTGGATGCACCCAGGCCGGCCCGAGCCTCCCACCGCAGACAGTGTGGAACAGAGTGAGCCTGAGCTGCCCAAGGCGATGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
3UTR CCA 90 bp CACGCTGCTTCAGAGGAACAGGCAGAGCCCTCACCCGGGCAATGCTaGGCACAACGGGGGCAGCCACGGTCCGGACCCCACCTGCAATTC +
Preference number: 1 (lower is better)
Translates to: HAASEEQAEPSPGQC*AQRGQPRSGPHLQF
Trigger: GAATTGCAGGTGGGGTCCGGACCGTGGCTGCCCCCGTTGTGCCCAGCATTGCCCGGGTGAGGGCTCTGCCTGTTCCTCTGAAGCAGCGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000459912.5
3UTR GCA 90 bp AATCACGCTGCTTCAGAGGAACAGGCAGAGCCCTCACCCGGGCAATaGTGGGCACAACGGGGGCAGCCACGGTCCGGACCCCACCTGCAA +
Preference number: 1 (lower is better)
Translates to: NHAASEEQAEPSPGQ*WAQRGQPRSGPHLQ
Trigger: TTGCAGGTGGGGTCCGGACCGTGGCTGCCCCCGTTGTGCCCAGCATTGCCCGGGTGAGGGCTCTGCCTGTTCCTCTGAAGCAGCGTGATT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
3UTR TCA 90 bp ACACTGTCTGCGGTGGGAGGCTCGGGCCGGCCTGGGTGCATCCAGTaGGTACCACGTTCCCTTTTCCCGGCACACTGTCTCCAGGACAGG +
Preference number: 1 (lower is better)
Translates to: TLSAVGGSGRPGCIQ*VPRSLFPAHCLQDR
Trigger: CCTGTCCTGGAGACAGTGTGCCGGGAAAAGGGAACGTGGTACTCACTGGATGCACCCAGGCCGGCCCGAGCCTCCCACCGCAGACAGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
3UTR CCA 90 bp TCGCCTTGGGCAGCTCAGGCTCACTCTGTTCCACACTGTCTGCGGTaGGAGGCTCGGGCCGGCCTGGGTGCATCCAGTGAGTACCACGTT +
Preference number: 1 (lower is better)
Translates to: SPWAAQAHSVPHCLR*EARAGLGASSEYHV
Trigger: AACGTGGTACTCACTGGATGCACCCAGGCCGGCCCGAGCCTCCCACCGCAGACAGTGTGGAACAGAGTGAGCCTGAGCTGCCCAAGGCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
3UTR CCA 90 bp CTCACTCTGTTCCACACTGTCTGCGGTGGGAGGCTCGGGCCGGCCTaGGTGCATCCAGTGAGTACCACGTTCCCTTTTCCCGGCACACTG +
Preference number: 1 (lower is better)
Translates to: LTLFHTVCGGRLGPA*VHPVSTTFPFPGTL
Trigger: CAGTGTGCCGGGAAAAGGGAACGTGGTACTCACTGGATGCACCCAGGCCGGCCCGAGCCTCCCACCGCAGACAGTGTGGAACAGAGTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
3UTR CCA 90 bp CCACGCGGAGAGGCCTCCAGTCATACAGCACAAAGGGCATCGCCTTaGGCAGCTCAGGCTCACTCTGTTCCACACTGTCTGCGGTGGGAG +
Preference number: 1 (lower is better)
Translates to: PRGEASSHTAQRASP*AAQAHSVPHCLRWE
Trigger: CTCCCACCGCAGACAGTGTGGAACAGAGTGAGCCTGAGCTGCCCAAGGCGATGCCCTTTGTGCTGTATGACTGGAGGCCTCTCCGCGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
3UTR GCA 90 bp GAGGTGTCTTTTCGTAGTACTCGAAGCACTTGGCGGGAGCGCTGCTaGTCCACGTGTAGTCAGACGGCTTCTTCCCGCGGTTGTCCCGGG +
Preference number: 1 (lower is better)
Translates to: EVSFRSTRSTWRERC*STCSQTASSRGCPG
Trigger: CCCGGGACAACCGCGGGAAGAAGCCGTCTGACTACACGTGGAGCAGCAGCGCTCCCGCCAAGTGCTTCGAGTACTACGAAAAGACACCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459912.5
3UTR GCA 90 bp TCAGAGGTGTCTTTTCGTAGTACTCGAAGCACTTGGCGGGAGCGCTaGTGCTCCACGTGTAGTCAGACGGCTTCTTCCCGCGGTTGTCCC +
Preference number: 1 (lower is better)
Translates to: SEVSFRSTRSTWRER*CSTCSQTASSRGCP
Trigger: GGGACAACCGCGGGAAGAAGCCGTCTGACTACACGTGGAGCAGCAGCGCTCCCGCCAAGTGCTTCGAGTACTACGAAAAGACACCTCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459912.5
3UTR GCA 90 bp AGGAAGGGACTCGAAGGAGCGTTGTTCTATCTACAGCAATCACGCTaGTTCAGAGGAACAGGCAGAGCCCTCACCCGGGCAATGCTGGGC +
Preference number: 1 (lower is better)
Translates to: RKGLEGALFYLQQSR*FRGTGRALTRAMLG
Trigger: GCCCAGCATTGCCCGGGTGAGGGCTCTGCCTGTTCCTCTGAAGCAGCGTGATTGCTGTAGATAGAACAACGCTCCTTCGAGTCCCTTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
3UTR CCA 90 bp GCTGTGACAGAGTCAGAGGTGTCTTTTCGTAGTACTCGAAGCACTTaGCGGGAGCGCTGCTGCTCCACGTGTAGTCAGACGGCTTCTTCC +
Preference number: 1 (lower is better)
Translates to: AVTESEVSFRSTRST*RERCCSTCSQTASS
Trigger: GGAAGAAGCCGTCTGACTACACGTGGAGCAGCAGCGCTCCCGCCAAGTGCTTCGAGTACTACGAAAAGACACCTCTGACTCTGTCACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459912.5
3UTR CCA 90 bp GCGGGATGTTTAACTTGGCAATCTTCTCCAGCCCTCGGACGCCAGTaGCCTTCCTCAAGTTCACCCTGCAGAGCTGTGACAGAGTCAGAG +
Preference number: 1 (lower is better)
Translates to: AGCLTWQSSPALGRQ*PSSSSPCRAVTESE
Trigger: CTCTGACTCTGTCACAGCTCTGCAGGGTGAACTTGAGGAAGGCCACTGGCGTCCGAGGGCTGGAGAAGATTGCCAAGTTAAACATCCCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459912.5
3UTR TCA 90 bp GTAGGTTCTGTAGAACAGCGCAGGGCCACACCCACAACTGTGACCTaGGACGCAGGCCTTCCCAACACCCTGGAAACATTATCCAGGATC +
Preference number: 1 (lower is better)
Translates to: VGSVEQRRATPTTVT*DAGLPNTLETLSRI
Trigger: GATCCTGGATAATGTTTCCAGGGTGTTGGGAAGGCCTGCGTCTCAGGTCACAGTTGTGGGTGTGGCCCTGCGCTGTTCTACAGAACCTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
3UTR TCA 90 bp CGGTCCGGACCCCACCTGCAATTCAGTTGTAGGAGAGGTAATCAATaGGCCGGGGCGGGATGTTTAACTTGGCAATCTTCTCCAGCCCTC +
Preference number: 1 (lower is better)
Translates to: RSGPHLQFSCRRGNQ*AGAGCLTWQSSPAL
Trigger: GAGGGCTGGAGAAGATTGCCAAGTTAAACATCCCGCCCCGGCTCATTGATTACCTCTCCTACAACTGAATTGCAGGTGGGGTCCGGACCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000459912.5
3UTR GCA 90 bp TCTTCTCCAGCCCTCGGACGCCAGTGGCCTTCCTCAAGTTCACCCTaGAGAGCTGTGACAGAGTCAGAGGTGTCTTTTCGTAGTACTCGA +
Preference number: 1 (lower is better)
Translates to: SSPALGRQWPSSSSP*RAVTESEVSFRSTR
Trigger: TCGAGTACTACGAAAAGACACCTCTGACTCTGTCACAGCTCTGCAGGGTGAACTTGAGGAAGGCCACTGGCGTCCGAGGGCTGGAGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459912.5
3UTR CCA 90 bp CGTGACCTGTTCTCCAGAATGGGTAGAGATGGGGTTTCATCAAGTTaGCCAGGCTGGTTTCAAACTCCTGACCTCAGATGCCCCAGAAAC +
Preference number: 1 (lower is better)
Translates to: RDLFSRMGRDGVSSS*PGWFQTPDLRCPRN
Trigger: GTTTCTGGGGCATCTGAGGTCAGGAGTTTGAAACCAGCCTGGCCAACTTGATGAAACCCCATCTCTACCCATTCTGGAGAACAGGTCACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
3UTR GCA 90 bp ATCACTGCAGGACGGGATTGCAAGATTTTCTTATCCTGCCTTGGCTaGAGAGTCCCATTCCCGTCCAACTCAAAGCACTGGGACAATGCT +
Preference number: 1 (lower is better)
Translates to: ITAGRDCKIFLSCLG*RVPFPSNSKHWDNA
Trigger: AGCATTGTCCCAGTGCTTTGAGTTGGACGGGAATGGGACTCTGCAGCCAAGGCAGGATAAGAAAATCTTGCAATCCCGTCCTGCAGTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
3UTR GCA 90 bp CCTGTTTCTATCACTGCAGGACGGGATTGCAAGATTTTCTTATCCTaGCTTGGCTGCAGAGTCCCATTCCCGTCCAACTCAAAGCACTGG +
Preference number: 1 (lower is better)
Translates to: PVSITAGRDCKIFLS*LGCRVPFPSNSKHW
Trigger: CCAGTGCTTTGAGTTGGACGGGAATGGGACTCTGCAGCCAAGGCAGGATAAGAAAATCTTGCAATCCCGTCCTGCAGTGATAGAAACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
3UTR CCA 90 bp TTCTATCACTGCAGGACGGGATTGCAAGATTTTCTTATCCTGCCTTaGCTGCAGAGTCCCATTCCCGTCCAACTCAAAGCACTGGGACAA +
Preference number: 1 (lower is better)
Translates to: FYHCRTGLQDFLILP*LQSPIPVQLKALGQ
Trigger: TTGTCCCAGTGCTTTGAGTTGGACGGGAATGGGACTCTGCAGCCAAGGCAGGATAAGAAAATCTTGCAATCCCGTCCTGCAGTGATAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
3UTR TCA 90 bp GGTTTCAAACTCCTGACCTCAGATGCCCCAGAAACCACTCATCCCTaGACTAATCATGCAAAGTCCTCCAGTTTAACTCCCTGTTGTGGG +
Preference number: 1 (lower is better)
Translates to: GFKLLTSDAPETTHP*TNHAKSSSLTPCCG
Trigger: CCCACAACAGGGAGTTAAACTGGAGGACTTTGCATGATTAGTTCAGGGATGAGTGGTTTCTGGGGCATCTGAGGTCAGGAGTTTGAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
3UTR GCA 90 bp GCTTATAATGCAGAACGACCTGTTTCTATCACTGCAGGACGGGATTaGAAGATTTTCTTATCCTGCCTTGGCTGCAGAGTCCCATTCCCG +
Preference number: 1 (lower is better)
Translates to: AYNAERPVSITAGRD*KIFLSCLGCRVPFP
Trigger: CGGGAATGGGACTCTGCAGCCAAGGCAGGATAAGAAAATCTTGCAATCCCGTCCTGCAGTGATAGAAACAGGTCGTTCTGCATTATAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
3UTR GCA 90 bp AGAATGCCGAGCCACGAGAATATACACCTTGACACACCTTCACACTaGTGTCGGTTTGAATGGCTCATTACCAAAACCTTAGTGGTACCG +
Preference number: 1 (lower is better)
Translates to: RMPSHENIHLDTPSH*CRFEWLITKTLVVP
Trigger: CGGTACCACTAAGGTTTTGGTAATGAGCCATTCAAACCGACAGCAGTGTGAAGGTGTGTCAAGGTGTATATTCTCGTGGCTCGGCATTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
3UTR GCA 90 bp CTGACTGATCCAGAACTGGTAACTAAGGCGGTGATCAAACAGGAATaGTTTTCTTCTCAGTTTAGGACGAAGACCCGCCATGACAATGGC +
Preference number: 1 (lower is better)
Translates to: LTDPELVTKAVIKQE*FSSQFRTKTRHDNG
Trigger: GCCATTGTCATGGCGGGTCTTCGTCCTAAACTGAGAAGAAAAGCATTCCTGTTTGATCACCGCCTTAGTTACCAGTTCTGGATCAGTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
3UTR CCA 90 bp GAGAATATACACCTTGACACACCTTCACACTGCTGTCGGTTTGAATaGCTCATTACCAAAACCTTAGTGGTACCGCCTACGTGTCCTCTA +
Preference number: 1 (lower is better)
Translates to: ENIHLDTPSHCCRFE*LITKTLVVPPTCPL
Trigger: TAGAGGACACGTAGGCGGTACCACTAAGGTTTTGGTAATGAGCCATTCAAACCGACAGCAGTGTGAAGGTGTGTCAAGGTGTATATTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
3UTR TCA 90 bp TTAAAATTTATGAAGGCAAAGACTCCTAGGCCGGCCCATGCAGTCTaGATACGCTACCGAATGCTCCACCTATGGCTTATAATGCAGAAC +
Preference number: 1 (lower is better)
Translates to: LKFMKAKTPRPAHAV*IRYRMLHLWLIMQN
Trigger: GTTCTGCATTATAAGCCATAGGTGGAGCATTCGGTAGCGTATTCAGACTGCATGGGCCGGCCTAGGAGTCTTTGCCTTCATAAATTTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
3UTR-3UTR GCA 90 bp TGTCTGCGGTGGGAGGCTCGGGCCGGCCTGGGTGCATCCAGTGAGTACCACGTTCGAGGGCAGTCCTGGTaGCGACCCGGAGGTGGTGGC +
Preference number: 2 (lower is better)
Translates to: CLRWEARAGLGASSEYHVRGQSW*RPGGGG
Trigger: GCCACCACCTCCGGGTCGGCACCAGGACTGCCCTCG...AACGTGGTACTCACTGGATGCACCCAGGCCGGCCCGAGCCTCCCACCGCAGACA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
3UTR-3UTR TCA 90 bp TCCCAGGCCACATCCCAGGCCGACCTTCCGTGGGCCCAGCCATTCCCTATGAGCCCCACAACTGTGACCTaGGACGCAGGCCTTCCCAAC +
Preference number: 2 (lower is better)
Translates to: SQATSQADLPWAQPFPMSPTTVT*DAGLPN
Trigger: GTTGGGAAGGCCTGCGTCTCAGGTCACAGTTGTGGG...GCTCATAGGGAATGGCTGGGCCCACGGAAGGTCGGCCTGGGATGTGGCCTGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
3UTR-3UTR TCA 90 bp TATGAGCACCGAGGGCAGTCCTGGTGCCGACCCGGAGGTGGTGGCCTGCACCTGGGCAGGCTGCCCCGGTaGGTGAGAATCAGCAACAAT +
Preference number: 2 (lower is better)
Translates to: YEHRGQSWCRPGGGGLHLGRLPR*VRISNN
Trigger: ATTGTTGCTGATTCTCACTCACCGGGGCAGCCTGCC...CAGGTGCAGGCCACCACCTCCGGGTCGGCACCAGGACTGCCCTCGGTGCTCATA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
3UTR-3UTR GCA 90 bp CGGTGGGAGGCTCGGGCCGGCCTGGGTGCATCCAGTGAGTACCACGTTCCCTTTACTTGGCGGGAGCGCTaGTGCTCCACGTGTAGTCAG +
Preference number: 2 (lower is better)
Translates to: RWEARAGLGASSEYHVPFTWRER*CSTCSQ
Trigger: CTGACTACACGTGGAGCAGCAGCGCTCCCGCCAAGT...AAAGGGAACGTGGTACTCACTGGATGCACCCAGGCCGGCCCGAGCCTCCCACCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459912.5
3UTR-3UTR CCA 90 bp CCCACCCCCAAGTACCCACGCGGAGAGGCCTCCAGTCATACAGCACAAAGGGCACAGGCCGACCTTCCGTaGGCCCAGCCATTCCCTATG +
Preference number: 2 (lower is better)
Translates to: PTPKYPRGEASSHTAQRAQADLP*AQPFPM
Trigger: CATAGGGAATGGCTGGGCCCACGGAAGGTCGGCCTG...TGCCCTTTGTGCTGTATGACTGGAGGCCTCTCCGCGTGGGTACTTGGGGGTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
3UTR CAA 90 bp CCCACGCGGAGAGGCCTCCAGTCATACAGCACAAAGGGCATCGCCTaGGGCAGCTCAGGCTCACTCTGTTCCACACTGTCTGCGGTGGGA +
Preference number: 2 (lower is better)
Translates to: PTRRGLQSYSTKGIA*GSSGSLCSTLSAVG
Trigger: TCCCACCGCAGACAGTGTGGAACAGAGTGAGCCTGAGCTGCCCAAGGCGATGCCCTTTGTGCTGTATGACTGGAGGCCTCTCCGCGTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
3UTR-3UTR TCA 90 bp TGTCTGCGGTGGGAGGCTCGGGCCGGCCTGGGTGCATCCAGTGAGTACCACGTTTGGGCCCATGCCCATTaGGAGGGTAGGTTCTGTAGA +
Preference number: 2 (lower is better)
Translates to: CLRWEARAGLGASSEYHVWAHAH*EGRFCR
Trigger: TCTACAGAACCTACCCTCTCAATGGGCATGGGCCCA...AACGTGGTACTCACTGGATGCACCCAGGCCGGCCCGAGCCTCCCACCGCAGACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
3UTR-3UTR TCA 90 bp TGTCTGCGGTGGGAGGCTCGGGCCGGCCTGGGTGCATCCAGTGAGTACCACGTTCACCCTGCAGAGCTGTaGCAGAGTCAGAGGTGTCTT +
Preference number: 2 (lower is better)
Translates to: CLRWEARAGLGASSEYHVHPAEL*QSQRCL
Trigger: AAGACACCTCTGACTCTGTCACAGCTCTGCAGGGTG...AACGTGGTACTCACTGGATGCACCCAGGCCGGCCCGAGCCTCCCACCGCAGACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459912.5
3UTR-3UTR GCA 90 bp GCAATGCTGGGCACAACGGGGGCAGCCACGGTCCGGACCCCACCTGCAATTCAGAGTCTCATGAAGCTTTaGCGCATTCACGTTGGCCCC +
Preference number: 2 (lower is better)
Translates to: AMLGTTGAATVRTPPAIQSLMKL*RIHVGP
Trigger: GGGGCCAACGTGAATGCGGCAAAGCTTCATGAGACT...CTGAATTGCAGGTGGGGTCCGGACCGTGGCTGCCCCCGTTGTGCCCAGCATTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000459912.5
3UTR-3UTR CCA 90 bp AAACTCAGTGCTACTTGTGGGGAATACAAAGCCAGGGCCTTCCCCCACAAAGACGTGCCGACCCGGAGGTaGTGGCCTGCACCTGGGGCC +
Preference number: 2 (lower is better)
Translates to: KLSATCGEYKARAFPHKDVPTRR*WPAPGA
Trigger: GGCCCCAGGTGCAGGCCACCACCTCCGGGTCGGCAC...GTCTTTGTGGGGGAAGGCCCTGGCTTTGTATTCCCCACAAGTAGCACTGAGTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
3UTR-3UTR GCA 90 bp TGTCTGCGGTGGGAGGCTCGGGCCGGCCTGGGTGCATCCAGTGAGTACCACGTTCTACAGCAATCACGCTaGTTCAGAGGAACAGGCAGA +
Preference number: 2 (lower is better)
Translates to: CLRWEARAGLGASSEYHVLQQSR*FRGTGR
Trigger: TCTGCCTGTTCCTCTGAAGCAGCGTGATTGCTGTAG...AACGTGGTACTCACTGGATGCACCCAGGCCGGCCCGAGCCTCCCACCGCAGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
3UTR-3UTR GCA 90 bp GTCTCCAGGACAGGCGTGACCTGTTCTCCAGAATGGGTAGAGATGGGGTTTCATCCGGAGGTGGTGGCCTaGACCTGGGGCCTGTGCATC +
Preference number: 2 (lower is better)
Translates to: VSRTGVTCSPEWVEMGFHPEVVA*TWGLCI
Trigger: GATGCACAGGCCCCAGGTGCAGGCCACCACCTCCGG...ATGAAACCCCATCTCTACCCATTCTGGAGAACAGGTCACGCCTGTCCTGGAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
3UTR-3UTR GCA 90 bp CCTGCCTTGGCTGCAGAGTCCCATTCCCGTCCAACTCAAAGCACTGGGACAATGTCCCTGAGTGACAGATaGGCGCAGGCTTGGGGCTGG +
Preference number: 2 (lower is better)
Translates to: PALAAESHSRPTQSTGTMSLSDR*AQAWGW
Trigger: CCAGCCCCAAGCCTGCGCGCATCTGTCACTCAGGGA...CATTGTCCCAGTGCTTTGAGTTGGACGGGAATGGGACTCTGCAGCCAAGGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
3UTR-3UTR CCA 90 bp AAACTCAGTGCTACTTGTGGGGAATACAAAGCCAGGGCCTTCCCCCACAAAGACCCGACCCGGAGGTGGTaGCCTGCACCTGGGGCCTGT +
Preference number: 2 (lower is better)
Translates to: KLSATCGEYKARAFPHKDPTRRW*PAPGAC
Trigger: ACAGGCCCCAGGTGCAGGCCACCACCTCCGGGTCGG...GTCTTTGTGGGGGAAGGCCCTGGCTTTGTATTCCCCACAAGTAGCACTGAGTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
3UTR-3UTR CCA 90 bp GTCTCCAGGACAGGCGTGACCTGTTCTCCAGAATGGGTAGAGATGGGGTTTCATCACCGAGGGCAGTCCTaGTGCCGACCCGGAGGTGGT +
Preference number: 2 (lower is better)
Translates to: VSRTGVTCSPEWVEMGFHHRGQS*CRPGGG
Trigger: ACCACCTCCGGGTCGGCACCAGGACTGCCCTCGGTG...ATGAAACCCCATCTCTACCCATTCTGGAGAACAGGTCACGCCTGTCCTGGAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
3UTR-3UTR GCA 90 bp GACAGGCGTGACCTGTTCTCCAGAATGGGTAGAGATGGGGTTTCATCAAGTTGGCCCTCACCCGGGCAATaGTGGGCACAACGGGGGCAG +
Preference number: 2 (lower is better)
Translates to: DRRDLFSRMGRDGVSSSWPSPGQ*WAQRGQ
Trigger: CTGCCCCCGTTGTGCCCAGCATTGCCCGGGTGAGGG...CCAACTTGATGAAACCCCATCTCTACCCATTCTGGAGAACAGGTCACGCCTGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
3UTR-3UTR GCA 90 bp AAGTCCCTGAGTGACAGATGCGCGCAGGCTTGGGGCTGGGGGATGCCTTGGAAAGGTCCGGACCCCACCTaGAATTCAGTTGTAGGAGAG +
Preference number: 2 (lower is better)
Translates to: KSLSDRCAQAWGWGMPWKGPDPT*NSVVGE
Trigger: CTCTCCTACAACTGAATTGCAGGTGGGGTCCGGACC...TTTCCAAGGCATCCCCCAGCCCCAAGCCTGCGCGCATCTGTCACTCAGGGACTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000459912.5
3UTR-3UTR GCA 90 bp AACAATTCCCACAGAGTCTCCAAACAGGCCTTTGCACTGAGAATGCCGAGCCACTGCCAGCCTCCTCTGTaGTCCCCACGCCGTCTGTCC +
Preference number: 2 (lower is better)
Translates to: NNSHRVSKQAFALRMPSHCQPPL*SPRRLS
Trigger: GGACAGACGGCGTGGGGAGCACAGAGGAGGCTGGCA...GTGGCTCGGCATTCTCAGTGCAAAGGCCTGTTTGGAGACTCTGTGGGAATTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
3UTR-3UTR GCA 90 bp TGTCTGCGGTGGGAGGCTCGGGCCGGCCTGGGTGCATCCAGTGAGTACCACGTTACTGCAGGACGGGATTaGAAGATTTTCTTATCCTGC +
Preference number: 2 (lower is better)
Translates to: CLRWEARAGLGASSEYHVTAGRD*KIFLSC
Trigger: GCAGGATAAGAAAATCTTGCAATCCCGTCCTGCAGT...AACGTGGTACTCACTGGATGCACCCAGGCCGGCCCGAGCCTCCCACCGCAGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
3UTR-3UTR CCA 90 bp GACAGGCGTGACCTGTTCTCCAGAATGGGTAGAGATGGGGTTTCATCAAGTTGGTCACCCGGGCAATGCTaGGCACAACGGGGGCAGCCA +
Preference number: 2 (lower is better)
Translates to: DRRDLFSRMGRDGVSSSWSPGQC*AQRGQP
Trigger: TGGCTGCCCCCGTTGTGCCCAGCATTGCCCGGGTGA...CCAACTTGATGAAACCCCATCTCTACCCATTCTGGAGAACAGGTCACGCCTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
3UTR-3UTR CCA 90 bp CTGCAGGACGGGATTGCAAGATTTTCTTATCCTGCCTTGGCTGCAGAGTCCCATAGATGCGCGCAGGCTTaGGGCTGGGGGATGCCTTGG +
Preference number: 2 (lower is better)
Translates to: LQDGIARFSYPALAAESHRCAQA*GWGMPW
Trigger: CCAAGGCATCCCCCAGCCCCAAGCCTGCGCGCATCT...ATGGGACTCTGCAGCCAAGGCAGGATAAGAAAATCTTGCAATCCCGTCCTGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
3UTR-3UTR TCA 90 bp TCCAGGACAGGCGTGACCTGTTCTCCAGAATGGGTAGAGATGGGGTTTCATCAACCCAGCCATTCCCTATaGGCACCGAGGGCAGTCCTG +
Preference number: 2 (lower is better)
Translates to: SRTGVTCSPEWVEMGFHQPSHSL*APRAVL
Trigger: CAGGACTGCCCTCGGTGCTCATAGGGAATGGCTGGG...TTGATGAAACCCCATCTCTACCCATTCTGGAGAACAGGTCACGCCTGTCCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
3UTR-3UTR TCA 90 bp AAACTCAGTGCTACTTGTGGGGAATACAAAGCCAGGGCCTTCCCCCACAAAGACCCCAGCCATTCCCTATaGGCACCGAGGGCAGTCCTG +
Preference number: 2 (lower is better)
Translates to: KLSATCGEYKARAFPHKDPSHSL*APRAVL
Trigger: CAGGACTGCCCTCGGTGCTCATAGGGAATGGCTGGG...GTCTTTGTGGGGGAAGGCCCTGGCTTTGTATTCCCCACAAGTAGCACTGAGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
3UTR-3UTR GCA 90 bp AGGGACTCGAAGGAGCGTTGTTCTATCTACAGCAATCACGCTGCTTCAGAGGAATGCCAGCCTCCTCTGTaGTCCCCACGCCGTCTGTCC +
Preference number: 2 (lower is better)
Translates to: RDSKERCSIYSNHAASEECQPPL*SPRRLS
Trigger: GGACAGACGGCGTGGGGAGCACAGAGGAGGCTGGCA...TTCCTCTGAAGCAGCGTGATTGCTGTAGATAGAACAACGCTCCTTCGAGTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
3UTR-3UTR GCA 90 bp ACCTTGACACACCTTCACACTGCTGTCGGTTTGAATGGCTCATTACCAAAACCTCGAGGGCAGTCCTGGTaGCGACCCGGAGGTGGTGGC +
Preference number: 2 (lower is better)
Translates to: TLTHLHTAVGLNGSLPKPRGQSW*RPGGGG
Trigger: GCCACCACCTCCGGGTCGGCACCAGGACTGCCCTCG...AGGTTTTGGTAATGAGCCATTCAAACCGACAGCAGTGTGAAGGTGTGTCAAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
3UTR-3UTR GCA 90 bp AAACTCAGTGCTACTTGTGGGGAATACAAAGCCAGGGCCTTCCCCCACAAAGACTCCCTGAGTGACAGATaGGCGCAGGCTTGGGGCTGG +
Preference number: 2 (lower is better)
Translates to: KLSATCGEYKARAFPHKDSLSDR*AQAWGW
Trigger: CCAGCCCCAAGCCTGCGCGCATCTGTCACTCAGGGA...GTCTTTGTGGGGGAAGGCCCTGGCTTTGTATTCCCCACAAGTAGCACTGAGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
3UTR-3UTR GCA 90 bp CGAAGGAGCGTTGTTCTATCTACAGCAATCACGCTGCTTCAGAGGAACAGGCAGTGGCGGGAGCGCTGCTaGTCCACGTGTAGTCAGACG +
Preference number: 2 (lower is better)
Translates to: RRSVVLSTAITLLQRNRQWRERC*STCSQT
Trigger: CGTCTGACTACACGTGGAGCAGCAGCGCTCCCGCCA...CTGCCTGTTCCTCTGAAGCAGCGTGATTGCTGTAGATAGAACAACGCTCCTTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459912.5
3UTR-3UTR CCA 90 bp CCGTCTGTCCTGAGAGTGCCTTTGAGGATGGTCCGTAAAAGAGGAAAACTGGATTCACCCGGGCAATGCTaGGCACAACGGGGGCAGCCA +
Preference number: 2 (lower is better)
Translates to: PSVLRVPLRMVRKRGKLDSPGQC*AQRGQP
Trigger: TGGCTGCCCCCGTTGTGCCCAGCATTGCCCGGGTGA...ATCCAGTTTTCCTCTTTTACGGACCATCCTCAAAGGCACTCTCAGGACAGACGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
3UTR-3UTR CCA 90 bp GAGAGGCCTCCAGTCATACAGCACAAAGGGCATCGCCTTGGGCAGCTCAGGCTCAAGAGGAAAACTGGATaGTTGGGCCCATGCCCATTG +
Preference number: 2 (lower is better)
Translates to: ERPPVIQHKGHRLGQLRLKRKTG*LGPCPL
Trigger: CAATGGGCATGGGCCCAACCATCCAGTTTTCCTCTT...GAGCCTGAGCTGCCCAAGGCGATGCCCTTTGTGCTGTATGACTGGAGGCCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
3UTR-3UTR TCA 90 bp AGGACGGGATTGCAAGATTTTCTTATCCTGCCTTGGCTGCAGAGTCCCATTCCCCCCACAACTGTGACCTaGGACGCAGGCCTTCCCAAC +
Preference number: 2 (lower is better)
Translates to: RTGLQDFLILPWLQSPIPPTTVT*DAGLPN
Trigger: GTTGGGAAGGCCTGCGTCTCAGGTCACAGTTGTGGG...GGGAATGGGACTCTGCAGCCAAGGCAGGATAAGAAAATCTTGCAATCCCGTCCT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
3UTR-3UTR TCA 90 bp AGGATCCAGGAGAGAAGCCTAAACAGGATCGCAGGAAGGGACTCGAAGGAGCGTTGGGCCCATGCCCATTaGGAGGGTAGGTTCTGTAGA +
Preference number: 2 (lower is better)
Translates to: RIQERSLNRIAGRDSKERWAHAH*EGRFCR
Trigger: TCTACAGAACCTACCCTCTCAATGGGCATGGGCCCA...ACGCTCCTTCGAGTCCCTTCCTGCGATCCTGTTTAGGCTTCTCTCCTGGATCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
3UTR-3UTR GCA 90 bp CAAGTACCCACGCGGAGAGGCCTCCAGTCATACAGCACAAAGGGCATCGCCTTGGGATGCCTTGGAAAGTaGTCCAGGAAAAGCATCCAC +
Preference number: 2 (lower is better)
Translates to: QVPTRRGLQSYSTKGIALGCLGK*SRKSIH
Trigger: GTGGATGCTTTTCCTGGAGCACTTTCCAAGGCATCC...CAAGGCGATGCCCTTTGTGCTGTATGACTGGAGGCCTCTCCGCGTGGGTACTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
3UTR-3UTR CCA 90 bp TTTGAATGGCTCATTACCAAAACCTTAGTGGTACCGCCTACGTGTCCTCTAAAAGTGCCGACCCGGAGGTaGTGGCCTGCACCTGGGGCC +
Preference number: 2 (lower is better)
Translates to: FEWLITKTLVVPPTCPLKVPTRR*WPAPGA
Trigger: GGCCCCAGGTGCAGGCCACCACCTCCGGGTCGGCAC...TTTTAGAGGACACGTAGGCGGTACCACTAAGGTTTTGGTAATGAGCCATTCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
3UTR-3UTR CCA 90 bp CTGAATACGCTACCGAATGCTCCACCTATGGCTTATAATGCAGAACGACCTGTTCACCGAGGGCAGTCCTaGTGCCGACCCGGAGGTGGT +
Preference number: 2 (lower is better)
Translates to: LNTLPNAPPMAYNAERPVHRGQS*CRPGGG
Trigger: ACCACCTCCGGGTCGGCACCAGGACTGCCCTCGGTG...AACAGGTCGTTCTGCATTATAAGCCATAGGTGGAGCATTCGGTAGCGTATTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
3UTR-3UTR CCA 90 bp CAAGTACCCACGCGGAGAGGCCTCCAGTCATACAGCACAAAGGGCATCGCCTTGACTCAGTGCTACTTGTaGGGAATACAAAGCCAGGGC +
Preference number: 2 (lower is better)
Translates to: QVPTRRGLQSYSTKGIALTQCYL*GIQSQG
Trigger: GCCCTGGCTTTGTATTCCCCACAAGTAGCACTGAGT...CAAGGCGATGCCCTTTGTGCTGTATGACTGGAGGCCTCTCCGCGTGGGTACTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
3UTR-3UTR CCA 90 bp TCCAGGACAGGCGTGACCTGTTCTCCAGAATGGGTAGAGATGGGGTTTCATCAAAGTACTCGAAGCACTTaGCGGGAGCGCTGCTGCTCC +
Preference number: 2 (lower is better)
Translates to: SRTGVTCSPEWVEMGFHQSTRST*RERCCS
Trigger: GGAGCAGCAGCGCTCCCGCCAAGTGCTTCGAGTACT...TTGATGAAACCCCATCTCTACCCATTCTGGAGAACAGGTCACGCCTGTCCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459912.5
3UTR-3UTR TCA 90 bp AGGGACTCGAAGGAGCGTTGTTCTATCTACAGCAATCACGCTGCTTCAGAGGAAGGCTGCCCCGGTGAGTaGGAATCAGCAACAATGCCC +
Preference number: 2 (lower is better)
Translates to: RDSKERCSIYSNHAASEEGCPGE*ESATMP
Trigger: GGGCATTGTTGCTGATTCTCACTCACCGGGGCAGCC...TTCCTCTGAAGCAGCGTGATTGCTGTAGATAGAACAACGCTCCTTCGAGTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
3UTR-3UTR TCA 90 bp TCCAGGACAGGCGTGACCTGTTCTCCAGAATGGGTAGAGATGGGGTTTCATCAACCCATAGAAAGTCCCTaGGTGACAGATGCGCGCAGG +
Preference number: 2 (lower is better)
Translates to: SRTGVTCSPEWVEMGFHQPIESP*VTDARR
Trigger: CCTGCGCGCATCTGTCACTCAGGGACTTTCTATGGG...TTGATGAAACCCCATCTCTACCCATTCTGGAGAACAGGTCACGCCTGTCCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
3UTR-3UTR GCA 90 bp CTGCCTTGGCTGCAGAGTCCCATTCCCGTCCAACTCAAAGCACTGGGACAATGCGACACACCTTCACACTaGTGTCGGTTTGAATGGCTC +
Preference number: 2 (lower is better)
Translates to: LPWLQSPIPVQLKALGQCDTPSH*CRFEWL
Trigger: GAGCCATTCAAACCGACAGCAGTGTGAAGGTGTGTC...GCATTGTCCCAGTGCTTTGAGTTGGACGGGAATGGGACTCTGCAGCCAAGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
3UTR-3UTR GCA 90 bp CAGTGCTACTTGTGGGGAATACAAAGCCAGGGCCTTCCCCCACAAAGACCCATAGAGAATCAGCAACAATaGCCTCAGTCCCCAGCTCTG +
Preference number: 2 (lower is better)
Translates to: QCYLWGIQSQGLPPQRPIENQQQ*PQSPAL
Trigger: CAGAGCTGGGGACTGAGGGCATTGTTGCTGATTCTC...TATGGGTCTTTGTGGGGGAAGGCCCTGGCTTTGTATTCCCCACAAGTAGCACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
3UTR-3UTR CCA 90 bp AGGATCCAGGAGAGAAGCCTAAACAGGATCGCAGGAAGGGACTCGAAGGAGCGTGCCTTCCCAACACCCTaGAAACATTATCCAGGATCC +
Preference number: 2 (lower is better)
Translates to: RIQERSLNRIAGRDSKERAFPTP*KHYPGS
Trigger: GGATCCTGGATAATGTTTCCAGGGTGTTGGGAAGGC...ACGCTCCTTCGAGTCCCTTCCTGCGATCCTGTTTAGGCTTCTCTCCTGGATCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
3UTR-3UTR CCA 90 bp CCAGGCCACATCCCAGGCCGACCTTCCGTGGGCCCAGCCATTCCCTATGAGCACACTTTTTACAAGAGTTaGAGACCTAATACTGAAGAC +
Preference number: 2 (lower is better)
Translates to: PGHIPGRPSVGPAIPYEHTFYKS*RPNTED
Trigger: GTCTTCAGTATTAGGTCTCCAACTCTTGTAAAAAGT...GTGCTCATAGGGAATGGCTGGGCCCACGGAAGGTCGGCCTGGGATGTGGCCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
3UTR CAA 90 bp GGAGAGAAGCCTAAACAGGATCGCAGGAAGGGACTCGAAGGAGCGTaGTTCTATCTACAGCAATCACGCTGCTTCAGAGGAACAGGCAGA +
Preference number: 2 (lower is better)
Translates to: GEKPKQDRRKGLEGA*FYLQQSRCFRGTGR
Trigger: TCTGCCTGTTCCTCTGAAGCAGCGTGATTGCTGTAGATAGAACAACGCTCCTTCGAGTCCCTTCCTGCGATCCTGTTTAGGCTTCTCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
3UTR-3UTR TCA 90 bp TCCCGTCCAACTCAAAGCACTGGGACAATGCTGGATGTGATAGATGGTCTTACTCCGGCCCATGCAGTCTaGATACGCTACCGAATGCTC +
Preference number: 2 (lower is better)
Translates to: SRPTQSTGTMLDVIDGLTPAHAV*IRYRML
Trigger: GAGCATTCGGTAGCGTATTCAGACTGCATGGGCCGG...AGTAAGACCATCTATCACATCCAGCATTGTCCCAGTGCTTTGAGTTGGACGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
3UTR-3UTR TCA 90 bp GACAGGCGTGACCTGTTCTCCAGAATGGGTAGAGATGGGGTTTCATCAAGTTGGTCACGGCGGCCAGCATaGAGTTTTTCGCCAGATTTG +
Preference number: 2 (lower is better)
Translates to: DRRDLFSRMGRDGVSSSWSRRPA*SFSPDL
Trigger: CAAATCTGGCGAAAAACTTCATGCTGGCCGCCGTGA...CCAACTTGATGAAACCCCATCTCTACCCATTCTGGAGAACAGGTCACGCCTGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
3UTR-3UTR TCA 90 bp AAACTCAGTGCTACTTGTGGGGAATACAAAGCCAGGGCCTTCCCCCACAAAGACAGGAGAGGTAATCAATaGGCCGGGGCGGGATGTTTA +
Preference number: 2 (lower is better)
Translates to: KLSATCGEYKARAFPHKDRRGNQ*AGAGCL
Trigger: TAAACATCCCGCCCCGGCTCATTGATTACCTCTCCT...GTCTTTGTGGGGGAAGGCCCTGGCTTTGTATTCCCCACAAGTAGCACTGAGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000459912.5
3UTR-3UTR TCA 90 bp ACGAGAATATACACCTTGACACACCTTCACACTGCTGTCGGTTTGAATGGCTCAGGCAGGCTGCCCCGGTaGGTGAGAATCAGCAACAAT +
Preference number: 2 (lower is better)
Translates to: TRIYTLTHLHTAVGLNGSGRLPR*VRISNN
Trigger: ATTGTTGCTGATTCTCACTCACCGGGGCAGCCTGCC...TGAGCCATTCAAACCGACAGCAGTGTGAAGGTGTGTCAAGGTGTATATTCTCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
3UTR-3UTR TCA 90 bp GAACGACCTGTTTCTATCACTGCAGGACGGGATTGCAAGATTTTCTTATCCTGCCCCATAGAAAGTCCCTaGGTGACAGATGCGCGCAGG +
Preference number: 2 (lower is better)
Translates to: ERPVSITAGRDCKIFLSCPIESP*VTDARR
Trigger: CCTGCGCGCATCTGTCACTCAGGGACTTTCTATGGG...GCAGGATAAGAAAATCTTGCAATCCCGTCCTGCAGTGATAGAAACAGGTCGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
3UTR-3UTR GCA 90 bp TCCCGTCCAACTCAAAGCACTGGGACAATGCTGGATGTGATAGATGGTCTTACTTTATCCTGCCTTGGCTaGAGAGTCCCATTCCCGTCC +
Preference number: 2 (lower is better)
Translates to: SRPTQSTGTMLDVIDGLTLSCLG*RVPFPS
Trigger: GGACGGGAATGGGACTCTGCAGCCAAGGCAGGATAA...AGTAAGACCATCTATCACATCCAGCATTGTCCCAGTGCTTTGAGTTGGACGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
3UTR-3UTR CCA 90 bp CTGCAGGACGGGATTGCAAGATTTTCTTATCCTGCCTTGGCTGCAGAGTCCCATACTCAGTGCTACTTGTaGGGAATACAAAGCCAGGGC +
Preference number: 2 (lower is better)
Translates to: LQDGIARFSYPALAAESHTQCYL*GIQSQG
Trigger: GCCCTGGCTTTGTATTCCCCACAAGTAGCACTGAGT...ATGGGACTCTGCAGCCAAGGCAGGATAAGAAAATCTTGCAATCCCGTCCTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
3UTR CAA 90 bp TTTCTATCACTGCAGGACGGGATTGCAAGATTTTCTTATCCTGCCTaGGCTGCAGAGTCCCATTCCCGTCCAACTCAAAGCACTGGGACA +
Preference number: 2 (lower is better)
Translates to: FLSLQDGIARFSYPA*AAESHSRPTQSTGT
Trigger: TGTCCCAGTGCTTTGAGTTGGACGGGAATGGGACTCTGCAGCCAAGGCAGGATAAGAAAATCTTGCAATCCCGTCCTGCAGTGATAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
3UTR-3UTR TCA 90 bp CTGAATACGCTACCGAATGCTCCACCTATGGCTTATAATGCAGAACGACCTGTTCCTGGGTGCATCCAGTaGGTACCACGTTCCCTTTTC +
Preference number: 2 (lower is better)
Translates to: LNTLPNAPPMAYNAERPVPGCIQ*VPRSLF
Trigger: GAAAAGGGAACGTGGTACTCACTGGATGCACCCAGG...AACAGGTCGTTCTGCATTATAAGCCATAGGTGGAGCATTCGGTAGCGTATTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
3UTR-3UTR GCA 90 bp CACAGAGTCTCCAAACAGGCCTTTGCACTGAGAATGCCGAGCCACGAGAATATAGGATGCCTTGGAAAGTaGTCCAGGAAAAGCATCCAC +
Preference number: 2 (lower is better)
Translates to: HRVSKQAFALRMPSHENIGCLGK*SRKSIH
Trigger: GTGGATGCTTTTCCTGGAGCACTTTCCAAGGCATCC...TATATTCTCGTGGCTCGGCATTCTCAGTGCAAAGGCCTGTTTGGAGACTCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
3UTR-3UTR GCA 90 bp CAGTGCTACTTGTGGGGAATACAAAGCCAGGGCCTTCCCCCACAAAGACCCATAGAAGAGAGTAAGCTCTaGACTCCTCAACTTTCTCAC +
Preference number: 2 (lower is better)
Translates to: QCYLWGIQSQGLPPQRPIEESKL*TPQLSH
Trigger: GTGAGAAAGTTGAGGAGTGCAGAGCTTACTCTCTTC...TATGGGTCTTTGTGGGGGAAGGCCCTGGCTTTGTATTCCCCACAAGTAGCACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000459912.5
3UTR-3UTR CCA 90 bp CTGAATACGCTACCGAATGCTCCACCTATGGCTTATAATGCAGAACGACCTGTTTTTCTTATCCTGCCTTaGCTGCAGAGTCCCATTCCC +
Preference number: 2 (lower is better)
Translates to: LNTLPNAPPMAYNAERPVFLILP*LQSPIP
Trigger: GGGAATGGGACTCTGCAGCCAAGGCAGGATAAGAAA...AACAGGTCGTTCTGCATTATAAGCCATAGGTGGAGCATTCGGTAGCGTATTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
3UTR-3UTR GCA 90 bp AAACAGGCCTTTGCACTGAGAATGCCGAGCCACGAGAATATACACCTTGACACAAAGATTTTCTTATCCTaGCTTGGCTGCAGAGTCCCA +
Preference number: 2 (lower is better)
Translates to: KQAFALRMPSHENIHLDTKIFLS*LGCRVP
Trigger: TGGGACTCTGCAGCCAAGGCAGGATAAGAAAATCTT...TGTGTCAAGGTGTATATTCTCGTGGCTCGGCATTCTCAGTGCAAAGGCCTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
3UTR-3UTR CCA 90 bp TCCCGTCCAACTCAAAGCACTGGGACAATGCTGGATGTGATAGATGGTCTTACTTCCAACTCAAAGCACTaGGACAATGCTGGATGTGAT +
Preference number: 2 (lower is better)
Translates to: SRPTQSTGTMLDVIDGLTSNSKH*DNAGCD
Trigger: ATCACATCCAGCATTGTCCCAGTGCTTTGAGTTGGA...AGTAAGACCATCTATCACATCCAGCATTGTCCCAGTGCTTTGAGTTGGACGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
3UTR-3UTR CCA 90 bp ATACGCTACCGAATGCTCCACCTATGGCTTATAATGCAGAACGACCTGTTTCTAGCGGGATGTTTAACTTaGCAATCTTCTCCAGCCCTC +
Preference number: 2 (lower is better)
Translates to: IRYRMLHLWLIMQNDLFLAGCLT*QSSPAL
Trigger: GAGGGCTGGAGAAGATTGCCAAGTTAAACATCCCGC...TAGAAACAGGTCGTTCTGCATTATAAGCCATAGGTGGAGCATTCGGTAGCGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459912.5
3UTR-3UTR TCA 90 bp CTGAATACGCTACCGAATGCTCCACCTATGGCTTATAATGCAGAACGACCTGTTGAAACCACTCATCCCTaGACTAATCATGCAAAGTCC +
Preference number: 2 (lower is better)
Translates to: LNTLPNAPPMAYNAERPVETTHP*TNHAKS
Trigger: GGACTTTGCATGATTAGTTCAGGGATGAGTGGTTTC...AACAGGTCGTTCTGCATTATAAGCCATAGGTGGAGCATTCGGTAGCGTATTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
3UTR-3UTR TCA 90 bp TTGCTAGAGGCAAGAATCTCTTACAAAGATGAAAGGGCAGAACCCAGTGCTTTTCTGGTTTCAAACTCCTaGCCTCAGATGCCCCAGAAA +
Preference number: 2 (lower is better)
Translates to: LLEARISYKDERAEPSAFLVSNS*PQMPQK
Trigger: TTTCTGGGGCATCTGAGGTCAGGAGTTTGAAACCAG...AAAAGCACTGGGTTCTGCCCTTTCATCTTTGTAAGAGATTCTTGCCTCTAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
3UTR-3UTR CCA 90 bp TTTGAATGGCTCATTACCAAAACCTTAGTGGTACCGCCTACGTGTCCTCTAAAAGCCTTCCCAACACCCTaGAAACATTATCCAGGATCC +
Preference number: 2 (lower is better)
Translates to: FEWLITKTLVVPPTCPLKAFPTP*KHYPGS
Trigger: GGATCCTGGATAATGTTTCCAGGGTGTTGGGAAGGC...TTTTAGAGGACACGTAGGCGGTACCACTAAGGTTTTGGTAATGAGCCATTCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
3UTR-3UTR CCA 90 bp ACGAGAATATACACCTTGACACACCTTCACACTGCTGTCGGTTTGAATGGCTCACGAATGCTCCACCTATaGCTTATAATGCAGAACGAC +
Preference number: 2 (lower is better)
Translates to: TRIYTLTHLHTAVGLNGSRMLHL*LIMQND
Trigger: GTCGTTCTGCATTATAAGCCATAGGTGGAGCATTCG...TGAGCCATTCAAACCGACAGCAGTGTGAAGGTGTGTCAAGGTGTATATTCTCGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
3UTR-3UTR CCA 90 bp TCCCGTCCAACTCAAAGCACTGGGACAATGCTGGATGTGATAGATGGTCTTACTTGCTGTCGGTTTGAATaGCTCATTACCAAAACCTTA +
Preference number: 2 (lower is better)
Translates to: SRPTQSTGTMLDVIDGLTCCRFE*LITKTL
Trigger: TAAGGTTTTGGTAATGAGCCATTCAAACCGACAGCA...AGTAAGACCATCTATCACATCCAGCATTGTCCCAGTGCTTTGAGTTGGACGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
3UTR-3UTR TCA 90 bp TTGCTAGAGGCAAGAATCTCTTACAAAGATGAAAGGGCAGAACCCAGTGCTTTTAATCTCTTACAAAGATaGAAGGGCAGAACCCAGTGC +
Preference number: 2 (lower is better)
Translates to: LLEARISYKDERAEPSAFNLLQR*KGRTQC
Trigger: GCACTGGGTTCTGCCCTTTCATCTTTGTAAGAGATT...AAAAGCACTGGGTTCTGCCCTTTCATCTTTGTAAGAGATTCTTGCCTCTAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
3UTR-3UTR CCA 90 bp CTGAATACGCTACCGAATGCTCCACCTATGGCTTATAATGCAGAACGACCTGTTACTTTTTACAAGAGTTaGAGACCTAATACTGAAGAC +
Preference number: 2 (lower is better)
Translates to: LNTLPNAPPMAYNAERPVTFYKS*RPNTED
Trigger: GTCTTCAGTATTAGGTCTCCAACTCTTGTAAAAAGT...AACAGGTCGTTCTGCATTATAAGCCATAGGTGGAGCATTCGGTAGCGTATTCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
3UTR-3UTR CCA 90 bp TTGCTAGAGGCAAGAATCTCTTACAAAGATGAAAGGGCAGAACCCAGTGCTTTTTGCTGTCGGTTTGAATaGCTCATTACCAAAACCTTA +
Preference number: 2 (lower is better)
Translates to: LLEARISYKDERAEPSAFCCRFE*LITKTL
Trigger: TAAGGTTTTGGTAATGAGCCATTCAAACCGACAGCA...AAAAGCACTGGGTTCTGCCCTTTCATCTTTGTAAGAGATTCTTGCCTCTAGCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
3UTR GCA 72 bp GAGGGCAGTCCTGGTGCCGACCCGGAGGTGGTGGCCTaGACCTGGGGCCTGTGCATCTGCGGCAGGCTGCCC +
Preference number: 3 (lower is better)
Translates to: EGSPGADPEVVA*TWGLCICGRLP
Trigger: GGGCAGCCTGCCGCAGATGCACAGGCCCCAGGTGCAGGCCACCACCTCCGGGTCGGCACCAGGACTGCCCTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
3UTR CCA 72 bp GCACCGAGGGCAGTCCTGGTGCCGACCCGGAGGTGGTaGCCTGCACCTGGGGCCTGTGCATCTGCGGCAGGC +
Preference number: 3 (lower is better)
Translates to: APRAVLVPTRRW*PAPGACASAAG
Trigger: GCCTGCCGCAGATGCACAGGCCCCAGGTGCAGGCCACCACCTCCGGGTCGGCACCAGGACTGCCCTCGGTGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
3UTR TCA 72 bp CCCAGGCCGACCTTCCGTGGGCCCAGCCATTCCCTATaGGCACCGAGGGCAGTCCTGGTGCCGACCCGGAGG +
Preference number: 3 (lower is better)
Translates to: PRPTFRGPSHSL*APRAVLVPTRR
Trigger: CCTCCGGGTCGGCACCAGGACTGCCCTCGGTGCTCATAGGGAATGGCTGGGCCCACGGAAGGTCGGCCTGGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
3UTR GCA 72 bp GCTTCAGAGGAACAGGCAGAGCCCTCACCCGGGCAATaGTGGGCACAACGGGGGCAGCCACGGTCCGGACCC +
Preference number: 3 (lower is better)
Translates to: ASEEQAEPSPGQ*WAQRGQPRSGP
Trigger: GGGTCCGGACCGTGGCTGCCCCCGTTGTGCCCAGCATTGCCCGGGTGAGGGCTCTGCCTGTTCCTCTGAAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
3UTR CCA 72 bp TCAGAGGAACAGGCAGAGCCCTCACCCGGGCAATGCTaGGCACAACGGGGGCAGCCACGGTCCGGACCCCAC +
Preference number: 3 (lower is better)
Translates to: SEEQAEPSPGQC*AQRGQPRSGPH
Trigger: GTGGGGTCCGGACCGTGGCTGCCCCCGTTGTGCCCAGCATTGCCCGGGTGAGGGCTCTGCCTGTTCCTCTGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
3UTR TCA 72 bp GCGGTGGGAGGCTCGGGCCGGCCTGGGTGCATCCAGTaGGTACCACGTTCCCTTTTCCCGGCACACTGTCTC +
Preference number: 3 (lower is better)
Translates to: AVGGSGRPGCIQ*VPRSLFPAHCL
Trigger: GAGACAGTGTGCCGGGAAAAGGGAACGTGGTACTCACTGGATGCACCCAGGCCGGCCCGAGCCTCCCACCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
3UTR CCA 72 bp CAGCAGTCCCAGGCCACATCCCAGGCCGACCTTCCGTaGGCCCAGCCATTCCCTATGAGCACCGAGGGCAGT +
Preference number: 3 (lower is better)
Translates to: QQSQATSQADLP*AQPFPMSTEGS
Trigger: ACTGCCCTCGGTGCTCATAGGGAATGGCTGGGCCCACGGAAGGTCGGCCTGGGATGTGGCCTGGGACTGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
3UTR-3UTR CAA 90 bp AGCAGCAGTCCCAGGCCACATCCCAGGCCGACCTTCCGTGGGCCCAGCCATTCCCAGTCTCATGAAGCTTaGCCGCATTCACGTTGGCCC +
Preference number: 3 (lower is better)
Translates to: SSSPRPHPRPTFRGPSHSQSHEA*PHSRWP
Trigger: GGGCCAACGTGAATGCGGCAAAGCTTCATGAGACTG...GGAATGGCTGGGCCCACGGAAGGTCGGCCTGGGATGTGGCCTGGGACTGCTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459912.5
3UTR GCA 72 bp GGGCACAACGGGGGCAGCCACGGTCCGGACCCCACCTaGAATTCAGTTGTAGGAGAGGTAATCAATGAGCCG +
Preference number: 3 (lower is better)
Translates to: GHNGGSHGPDPT*NSVVGEVINEP
Trigger: CGGCTCATTGATTACCTCTCCTACAACTGAATTGCAGGTGGGGTCCGGACCGTGGCTGCCCCCGTTGTGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000459912.5
3UTR GCA 72 bp TTTCGTAGTACTCGAAGCACTTGGCGGGAGCGCTGCTaGTCCACGTGTAGTCAGACGGCTTCTTCCCGCGGT +
Preference number: 3 (lower is better)
Translates to: FRSTRSTWRERC*STCSQTASSRG
Trigger: ACCGCGGGAAGAAGCCGTCTGACTACACGTGGAGCAGCAGCGCTCCCGCCAAGTGCTTCGAGTACTACGAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459912.5
3UTR-3UTR CAA 90 bp CGGTGGGAGGCTCGGGCCGGCCTGGGTGCATCCAGTGAGTACCACGTTCCCTTTGAAACTCAGTGCTACTaGTGGGGAATACAAAGCCAG +
Preference number: 3 (lower is better)
Translates to: RWEARAGLGASSEYHVPFETQCY*WGIQSQ
Trigger: CTGGCTTTGTATTCCCCACAAGTAGCACTGAGTTTC...AAAGGGAACGTGGTACTCACTGGATGCACCCAGGCCGGCCCGAGCCTCCCACCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
3UTR GCA 72 bp TCTTTTCGTAGTACTCGAAGCACTTGGCGGGAGCGCTaGTGCTCCACGTGTAGTCAGACGGCTTCTTCCCGC +
Preference number: 3 (lower is better)
Translates to: SFRSTRSTWRER*CSTCSQTASSR
Trigger: GCGGGAAGAAGCCGTCTGACTACACGTGGAGCAGCAGCGCTCCCGCCAAGTGCTTCGAGTACTACGAAAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459912.5
3UTR TCA 72 bp GTAGAACAGCGCAGGGCCACACCCACAACTGTGACCTaGGACGCAGGCCTTCCCAACACCCTGGAAACATTA +
Preference number: 3 (lower is better)
Translates to: VEQRRATPTTVT*DAGLPNTLETL
Trigger: TAATGTTTCCAGGGTGTTGGGAAGGCCTGCGTCTCAGGTCACAGTTGTGGGTGTGGCCCTGCGCTGTTCTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
3UTR GCA 72 bp CTCGAAGGAGCGTTGTTCTATCTACAGCAATCACGCTaGTTCAGAGGAACAGGCAGAGCCCTCACCCGGGCA +
Preference number: 3 (lower is better)
Translates to: LEGALFYLQQSR*FRGTGRALTRA
Trigger: TGCCCGGGTGAGGGCTCTGCCTGTTCCTCTGAAGCAGCGTGATTGCTGTAGATAGAACAACGCTCCTTCGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
3UTR GCA 72 bp CTTGGCCGCGTGGTGAAGGGCAGTCTCATGAAGCTTTaGCGCATTCACGTTGGCCCCCAAAACAGTAGGCAA +
Preference number: 3 (lower is better)
Translates to: LGRVVKGSLMKL*RIHVGPQNSRQ
Trigger: TTGCCTACTGTTTTGGGGGCCAACGTGAATGCGGCAAAGCTTCATGAGACTGCCCTTCACCACGCGGCCAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000459912.5
3UTR CCA 72 bp GAGTCAGAGGTGTCTTTTCGTAGTACTCGAAGCACTTaGCGGGAGCGCTGCTGCTCCACGTGTAGTCAGACG +
Preference number: 3 (lower is better)
Translates to: ESEVSFRSTRST*RERCCSTCSQT
Trigger: CGTCTGACTACACGTGGAGCAGCAGCGCTCCCGCCAAGTGCTTCGAGTACTACGAAAAGACACCTCTGACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459912.5
3UTR-3UTR CAA 90 bp AAGTCCCTGAGTGACAGATGCGCGCAGGCTTGGGGCTGGGGGATGCCTTGGAAAGGACTCGAAGGAGCGTaGTTCTATCTACAGCAATCA +
Preference number: 3 (lower is better)
Translates to: KSLSDRCAQAWGWGMPWKGLEGA*FYLQQS
Trigger: TGATTGCTGTAGATAGAACAACGCTCCTTCGAGTCC...TTTCCAAGGCATCCCCCAGCCCCAAGCCTGCGCGCATCTGTCACTCAGGGACTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
3UTR CCA 72 bp TTAACTTGGCAATCTTCTCCAGCCCTCGGACGCCAGTaGCCTTCCTCAAGTTCACCCTGCAGAGCTGTGACA +
Preference number: 3 (lower is better)
Translates to: LTWQSSPALGRQ*PSSSSPCRAVT
Trigger: TGTCACAGCTCTGCAGGGTGAACTTGAGGAAGGCCACTGGCGTCCGAGGGCTGGAGAAGATTGCCAAGTTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459912.5
3UTR-3UTR CAA 90 bp CAAGTACCCACGCGGAGAGGCCTCCAGTCATACAGCACAAAGGGCATCGCCTTGCAGTTTAACTCCCTGTaGTGGGCGGGGTTCTTAAAA +
Preference number: 3 (lower is better)
Translates to: QVPTRRGLQSYSTKGIALQFNSL*WAGFLK
Trigger: TTTTAAGAACCCCGCCCACAACAGGGAGTTAAACTG...CAAGGCGATGCCCTTTGTGCTGTATGACTGGAGGCCTCTCCGCGTGGGTACTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
3UTR TCA 72 bp AAAAGAGGAAAACTGGATGGTTGGGCCCATGCCCATTaGGAGGGTAGGTTCTGTAGAACAGCGCAGGGCCAC +
Preference number: 3 (lower is better)
Translates to: KRGKLDGWAHAH*EGRFCRTAQGH
Trigger: GTGGCCCTGCGCTGTTCTACAGAACCTACCCTCTCAATGGGCATGGGCCCAACCATCCAGTTTTCCTCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
3UTR-3UTR CAA 90 bp TTGCTAGAGGCAAGAATCTCTTACAAAGATGAAAGGGCAGAACCCAGTGCTTTTCAGATGCGCGCAGGCTaGGGGCTGGGGGATGCCTTG +
Preference number: 3 (lower is better)
Translates to: LLEARISYKDERAEPSAFQMRAG*GLGDAL
Trigger: CAAGGCATCCCCCAGCCCCAAGCCTGCGCGCATCTG...AAAAGCACTGGGTTCTGCCCTTTCATCTTTGTAAGAGATTCTTGCCTCTAGCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
3UTR GCA 72 bp GGACGGGATTGCAAGATTTTCTTATCCTGCCTTGGCTaGAGAGTCCCATTCCCGTCCAACTCAAAGCACTGG +
Preference number: 3 (lower is better)
Translates to: GRDCKIFLSCLG*RVPFPSNSKHW
Trigger: CCAGTGCTTTGAGTTGGACGGGAATGGGACTCTGCAGCCAAGGCAGGATAAGAAAATCTTGCAATCCCGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
3UTR-3UTR CAA 90 bp TGCTGTCGGTTTGAATGGCTCATTACCAAAACCTTAGTGGTACCGCCTACGTGTTTTGCCGCATTCACGTaGGCCCCCAAAACAGTAGGC +
Preference number: 3 (lower is better)
Translates to: CCRFEWLITKTLVVPPTCFAAFT*APKTVG
Trigger: GCCTACTGTTTTGGGGGCCAACGTGAATGCGGCAAA...ACACGTAGGCGGTACCACTAAGGTTTTGGTAATGAGCCATTCAAACCGACAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000459912.5
3UTR TCA 72 bp ATGAAGGCAAAGACTCCTAGGCCGGCCCATGCAGTCTaGATACGCTACCGAATGCTCCACCTATGGCTTATA +
Preference number: 3 (lower is better)
Translates to: MKAKTPRPAHAV*IRYRMLHLWLI
Trigger: TATAAGCCATAGGTGGAGCATTCGGTAGCGTATTCAGACTGCATGGGCCGGCCTAGGAGTCTTTGCCTTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
3UTR GCA 72 bp ATCACTGCAGGACGGGATTGCAAGATTTTCTTATCCTaGCTTGGCTGCAGAGTCCCATTCCCGTCCAACTCA +
Preference number: 3 (lower is better)
Translates to: ITAGRDCKIFLS*LGCRVPFPSNS
Trigger: TGAGTTGGACGGGAATGGGACTCTGCAGCCAAGGCAGGATAAGAAAATCTTGCAATCCCGTCCTGCAGTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
3UTR CCA 72 bp TGCAGGACGGGATTGCAAGATTTTCTTATCCTGCCTTaGCTGCAGAGTCCCATTCCCGTCCAACTCAAAGCA +
Preference number: 3 (lower is better)
Translates to: CRTGLQDFLILP*LQSPIPVQLKA
Trigger: TGCTTTGAGTTGGACGGGAATGGGACTCTGCAGCCAAGGCAGGATAAGAAAATCTTGCAATCCCGTCCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
3UTR-3UTR CAA 90 bp TCGCAGGAAGGGACTCGAAGGAGCGTTGTTCTATCTACAGCAATCACGCTGCTTGGACTCGAAGGAGCGTaGTTCTATCTACAGCAATCA +
Preference number: 3 (lower is better)
Translates to: SQEGTRRSVVLSTAITLLGLEGA*FYLQQS
Trigger: TGATTGCTGTAGATAGAACAACGCTCCTTCGAGTCC...AAGCAGCGTGATTGCTGTAGATAGAACAACGCTCCTTCGAGTCCCTTCCTGCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
3UTR TCA 72 bp CTCCTGACCTCAGATGCCCCAGAAACCACTCATCCCTaGACTAATCATGCAAAGTCCTCCAGTTTAACTCCC +
Preference number: 3 (lower is better)
Translates to: LLTSDAPETTHP*TNHAKSSSLTP
Trigger: GGGAGTTAAACTGGAGGACTTTGCATGATTAGTTCAGGGATGAGTGGTTTCTGGGGCATCTGAGGTCAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
3UTR TCA 72 bp CCCCACCTGCAATTCAGTTGTAGGAGAGGTAATCAATaGGCCGGGGCGGGATGTTTAACTTGGCAATCTTCT +
Preference number: 3 (lower is better)
Translates to: PHLQFSCRRGNQ*AGAGCLTWQSS
Trigger: AGAAGATTGCCAAGTTAAACATCCCGCCCCGGCTCATTGATTACCTCTCCTACAACTGAATTGCAGGTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000459912.5
3UTR GCA 72 bp GCAGAACGACCTGTTTCTATCACTGCAGGACGGGATTaGAAGATTTTCTTATCCTGCCTTGGCTGCAGAGTC +
Preference number: 3 (lower is better)
Translates to: AERPVSITAGRD*KIFLSCLGCRV
Trigger: GACTCTGCAGCCAAGGCAGGATAAGAAAATCTTGCAATCCCGTCCTGCAGTGATAGAAACAGGTCGTTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
3UTR TCA 72 bp ACAATTCCCACAGAGTCTCCAAACAGGCCTTTGCACTaGGAATGCCGAGCCACGAGAATATACACCTTGACA +
Preference number: 3 (lower is better)
Translates to: TIPTESPNRPLH*ECRATRIYTLT
Trigger: TGTCAAGGTGTATATTCTCGTGGCTCGGCATTCTCAGTGCAAAGGCCTGTTTGGAGACTCTGTGGGAATTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
3UTR-3UTR CAA 90 bp AACTCCCTGTTGTGGGCGGGGTTCTTAAAATTTATGAAGGCAAAGACTCCTAGGGTCCTGAGAGTGCCTTaGAGGATGGTCCGTAAAAGA +
Preference number: 3 (lower is better)
Translates to: NSLLWAGFLKFMKAKTPRVLRVP*RMVRKR
Trigger: TCTTTTACGGACCATCCTCAAAGGCACTCTCAGGAC...CCTAGGAGTCTTTGCCTTCATAAATTTTAAGAACCCCGCCCACAACAGGGAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
3UTR-3UTR CAA 90 bp AACTCCCTGTTGTGGGCGGGGTTCTTAAAATTTATGAAGGCAAAGACTCCTAGGGAAACTCAGTGCTACTaGTGGGGAATACAAAGCCAG +
Preference number: 3 (lower is better)
Translates to: NSLLWAGFLKFMKAKTPRETQCY*WGIQSQ
Trigger: CTGGCTTTGTATTCCCCACAAGTAGCACTGAGTTTC...CCTAGGAGTCTTTGCCTTCATAAATTTTAAGAACCCCGCCCACAACAGGGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
3UTR GCA 72 bp GAAAAACAATTCCCACAGAGTCTCCAAACAGGCCTTTaGACTGAGAATGCCGAGCCACGAGAATATACACCT +
Preference number: 3 (lower is better)
Translates to: EKQFPQSLQTGL*TENAEPREYTP
Trigger: AGGTGTATATTCTCGTGGCTCGGCATTCTCAGTGCAAAGGCCTGTTTGGAGACTCTGTGGGAATTGTTTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
3UTR GCA 72 bp CCAGAACTGGTAACTAAGGCGGTGATCAAACAGGAATaGTTTTCTTCTCAGTTTAGGACGAAGACCCGCCAT +
Preference number: 3 (lower is better)
Translates to: PELVTKAVIKQE*FSSQFRTKTRH
Trigger: ATGGCGGGTCTTCGTCCTAAACTGAGAAGAAAAGCATTCCTGTTTGATCACCGCCTTAGTTACCAGTTCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
3UTR-3UTR CAA 90 bp TTGCTAGAGGCAAGAATCTCTTACAAAGATGAAAGGGCAGAACCCAGTGCTTTTGTCCTGAGAGTGCCTTaGAGGATGGTCCGTAAAAGA +
Preference number: 3 (lower is better)
Translates to: LLEARISYKDERAEPSAFVLRVP*RMVRKR
Trigger: TCTTTTACGGACCATCCTCAAAGGCACTCTCAGGAC...AAAAGCACTGGGTTCTGCCCTTTCATCTTTGTAAGAGATTCTTGCCTCTAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
3UTR GCA 72 bp AGCCACGAGAATATACACCTTGACACACCTTCACACTaGTGTCGGTTTGAATGGCTCATTACCAAAACCTTA +
Preference number: 3 (lower is better)
Translates to: SHENIHLDTPSH*CRFEWLITKTL
Trigger: TAAGGTTTTGGTAATGAGCCATTCAAACCGACAGCAGTGTGAAGGTGTGTCAAGGTGTATATTCTCGTGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
3UTR GCA 72 bp CAAAACAGTAGGCAATTCAGAGAAGAGAGTAAGCTCTaGACTCCTCAACTTTCTCACGATAAGAGCAGACAT +
Preference number: 3 (lower is better)
Translates to: QNSRQFREESKL*TPQLSHDKSRH
Trigger: ATGTCTGCTCTTATCGTGAGAAAGTTGAGGAGTGCAGAGCTTACTCTCTTCTCTGAATTGCCTACTGTTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459912.5
CDS-3UTR CCA 90 bp GCAGAGCCCTCACCCGGGCAATGCTGGGCACAACGGGGGCAGCCACGGTCCGGAGTGCCGACCCGGAGGTaGTGGCCTGCACCTGGGGCC +
Preference number: 4 (lower is better)
Translates to: AEPSPGQCWAQRGQPRSGVPTRR*WPAPGA
Trigger: GGCCCCAGGTGCAGGCCACCACCTCCGGGTCGGCAC...TCCGGACCGTGGCTGCCCCCGTTGTGCCCAGCATTGCCCGGGTGAGGGCTCTGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR CCA 90 bp TCCCAGGCCACATCCCAGGCCGACCTTCCGTGGGCCCAGCCATTCCCTATGAGCGTGCCGACCCGGAGGTaGTGGCCTGCACCTGGGGCC +
Preference number: 4 (lower is better)
Translates to: SQATSQADLPWAQPFPMSVPTRR*WPAPGA
Trigger: GGCCCCAGGTGCAGGCCACCACCTCCGGGTCGGCAC...GCTCATAGGGAATGGCTGGGCCCACGGAAGGTCGGCCTGGGATGTGGCCTGGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR GCA 90 bp GGGAGCGCTGCTGCTCCACGTGTAGTCAGACGGCTTCTTCCCGCGGTTGTCCCGCTCACCCCGCTGGGCTaGCTCGTGCACAGGGGTCCG +
Preference number: 4 (lower is better)
Translates to: GSAAAPRVVRRLLPAVVPLTPLG*LVHRGP
Trigger: CGGACCCCTGTGCACGAGGCAGCCCAGCGGGGTGAG...CGGGACAACCGCGGGAAGAAGCCGTCTGACTACACGTGGAGCAGCAGCGCTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000459912.5
CDS-3UTR TCA 90 bp CCCGGGCAATGCTGGGCACAACGGGGGCAGCCACGGTCCGGACCCCACCTGCAATGTACAGGGGAGGGTTaGCCTTGGCCCCGTAGGACA +
Preference number: 4 (lower is better)
Translates to: PGQCWAQRGQPRSGPHLQCTGEG*PWPRRT
Trigger: TGTCCTACGGGGCCAAGGTCAACCCTCCCCTGTACA...TTGCAGGTGGGGTCCGGACCGTGGCTGCCCCCGTTGTGCCCAGCATTGCCCGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR GCA 90 bp CAATGCTGGGCACAACGGGGGCAGCCACGGTCCGGACCCCACCTGCAATTCAGTCACCGCGCCTGGCCCTaGAGACTGGCTGCGTGCAGG +
Preference number: 4 (lower is better)
Translates to: QCWAQRGQPRSGPHLQFSHRAWP*RLAACR
Trigger: CCTGCACGCAGCCAGTCTGCAGGGCCAGGCGCGGTG...ACTGAATTGCAGGTGGGGTCCGGACCGTGGCTGCCCCCGTTGTGCCCAGCATTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000459912.5
CDS-3UTR GCA 90 bp TGTCTGCGGTGGGAGGCTCGGGCCGGCCTGGGTGCATCCAGTGAGTACCACGTTCCCTCACCCGGGCAATaGTGGGCACAACGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: CLRWEARAGLGASSEYHVPSPGQ*WAQRGQ
Trigger: CTGCCCCCGTTGTGCCCAGCATTGCCCGGGTGAGGG...AACGTGGTACTCACTGGATGCACCCAGGCCGGCCCGAGCCTCCCACCGCAGACA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR CCA 90 bp GCAATGCTGGGCACAACGGGGGCAGCCACGGTCCGGACCCCACCTGCAATTCAGTTGCGAGCATCCACCTaGGCCCCAGCCGCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: AMLGTTGAATVRTPPAIQLRAST*APAASS
Trigger: GCTGCTGGCGGCTGGGGCCCAGGTGGATGCTCGCAA...CTGAATTGCAGGTGGGGTCCGGACCGTGGCTGCCCCCGTTGTGCCCAGCATTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000459912.5
CDS-3UTR TCA 90 bp GCAGAGCCCTCACCCGGGCAATGCTGGGCACAACGGGGGCAGCCACGGTCCGGACCGGCCCATGCAGTCTaGATACGCTACCGAATGCTC +
Preference number: 4 (lower is better)
Translates to: AEPSPGQCWAQRGQPRSGPAHAV*IRYRML
Trigger: GAGCATTCGGTAGCGTATTCAGACTGCATGGGCCGG...TCCGGACCGTGGCTGCCCCCGTTGTGCCCAGCATTGCCCGGGTGAGGGCTCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR GCA 90 bp CACGCTGCTTCAGAGGAACAGGCAGAGCCCTCACCCGGGCAATGCTGGGCACAACGAGGGCAGTCCTGGTaGCGACCCGGAGGTGGTGGC +
Preference number: 4 (lower is better)
Translates to: HAASEEQAEPSPGQCWAQRGQSW*RPGGGG
Trigger: GCCACCACCTCCGGGTCGGCACCAGGACTGCCCTCG...TTGTGCCCAGCATTGCCCGGGTGAGGGCTCTGCCTGTTCCTCTGAAGCAGCGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR CCA 90 bp CCAGGCCACATCCCAGGCCGACCTTCCGTGGGCCCAGCCATTCCCTATGAGCACGAGTCCACGGTGACCTaGTTCACGCAGGCGCCGCTC +
Preference number: 4 (lower is better)
Translates to: PGHIPGRPSVGPAIPYEHESTVT*FTQAPL
Trigger: GAGCGGCGCCTGCGTGAACCAGGTCACCGTGGACTC...GTGCTCATAGGGAATGGCTGGGCCCACGGAAGGTCGGCCTGGGATGTGGCCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR CCA 90 bp TGTCTGCGGTGGGAGGCTCGGGCCGGCCTGGGTGCATCCAGTGAGTACCACGTTTCACCCGGGCAATGCTaGGCACAACGGGGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: CLRWEARAGLGASSEYHVSPGQC*AQRGQP
Trigger: TGGCTGCCCCCGTTGTGCCCAGCATTGCCCGGGTGA...AACGTGGTACTCACTGGATGCACCCAGGCCGGCCCGAGCCTCCCACCGCAGACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR CCA 90 bp CGGTGGGAGGCTCGGGCCGGCCTGGGTGCATCCAGTGAGTACCACGTTCCCTTTTCACCCGGGCAATGCTaGGCACAACGGGGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: RWEARAGLGASSEYHVPFSPGQC*AQRGQP
Trigger: TGGCTGCCCCCGTTGTGCCCAGCATTGCCCGGGTGA...AAAGGGAACGTGGTACTCACTGGATGCACCCAGGCCGGCCCGAGCCTCCCACCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR CCA 90 bp GAAGCACTTGGCGGGAGCGCTGCTGCTCCACGTGTAGTCAGACGGCTTCTTCCCCCACACTGTCTGCGGTaGGAGGCTCGGGCCGGCCTG +
Preference number: 4 (lower is better)
Translates to: EALGGSAAAPRVVRRLLPPHCLR*EARAGL
Trigger: CAGGCCGGCCCGAGCCTCCCACCGCAGACAGTGTGG...GGGAAGAAGCCGTCTGACTACACGTGGAGCAGCAGCGCTCCCGCCAAGTGCTTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000459912.5
CDS-3UTR CCA 90 bp CCCGGGCAATGCTGGGCACAACGGGGGCAGCCACGGTCCGGACCCCACCTGCAACAATGGCGGGAACGCTaGAGTAAAACCTCACGGCGG +
Preference number: 4 (lower is better)
Translates to: PGQCWAQRGQPRSGPHLQQWRER*SKTSRR
Trigger: CCGCCGTGAGGTTTTACTCCAGCGTTCCCGCCATTG...TTGCAGGTGGGGTCCGGACCGTGGCTGCCCCCGTTGTGCCCAGCATTGCCCGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR GCA 90 bp TATGAGCACCGAGGGCAGTCCTGGTGCCGACCCGGAGGTGGTGGCCTGCACCTGATCAGCTGTTGCAGCTaGAGGCTCTCACCCCGCTGG +
Preference number: 4 (lower is better)
Translates to: YEHRGQSWCRPGGGGLHLISCCS*RLSPRW
Trigger: CCAGCGGGGTGAGAGCCTGCAGCTGCAACAGCTGAT...CAGGTGCAGGCCACCACCTCCGGGTCGGCACCAGGACTGCCCTCGGTGCTCATA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR GCA 90 bp TCCCAGGCCACATCCCAGGCCGACCTTCCGTGGGCCCAGCCATTCCCTATGAGCCGCAGAGCGGGGTGCTaGCGTCGATGTTGCGAGCAT +
Preference number: 4 (lower is better)
Translates to: SQATSQADLPWAQPFPMSRRAGC*RRCCEH
Trigger: ATGCTCGCAACATCGACGGCAGCACCCCGCTCTGCG...GCTCATAGGGAATGGCTGGGCCCACGGAAGGTCGGCCTGGGATGTGGCCTGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR GCA 90 bp TGTCTGCGGTGGGAGGCTCGGGCCGGCCTGGGTGCATCCAGTGAGTACCACGTTTCACACACTCGATGCTaGCCGAGGCGCAGGCATCGC +
Preference number: 4 (lower is better)
Translates to: CLRWEARAGLGASSEYHVSHTRC*PRRRHR
Trigger: GCGATGCCTGCGCCTCGGGCAGCATCGAGTGTGTGA...AACGTGGTACTCACTGGATGCACCCAGGCCGGCCCGAGCCTCCCACCGCAGACA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR CCA 90 bp TCCCAGGCCACATCCCAGGCCGACCTTCCGTGGGCCCAGCCATTCCCTATGAGCGCCCTCGGACGCCAGTaGCCTTCCTCAAGTTCACCC +
Preference number: 4 (lower is better)
Translates to: SQATSQADLPWAQPFPMSALGRQ*PSSSSP
Trigger: GGGTGAACTTGAGGAAGGCCACTGGCGTCCGAGGGC...GCTCATAGGGAATGGCTGGGCCCACGGAAGGTCGGCCTGGGATGTGGCCTGGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR TCA 90 bp GGGAGCGCTGCTGCTCCACGTGTAGTCAGACGGCTTCTTCCCGCGGTTGTCCCGCCCACAACTGTGACCTaGGACGCAGGCCTTCCCAAC +
Preference number: 4 (lower is better)
Translates to: GSAAAPRVVRRLLPAVVPPTTVT*DAGLPN
Trigger: GTTGGGAAGGCCTGCGTCTCAGGTCACAGTTGTGGG...CGGGACAACCGCGGGAAGAAGCCGTCTGACTACACGTGGAGCAGCAGCGCTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459912.5
CDS-3UTR GCA 90 bp CACGCTGCTTCAGAGGAACAGGCAGAGCCCTCACCCGGGCAATGCTGGGCACAAGCCCTGCAGACTGGCTaGGTGCAGGGGCGTGATGGA +
Preference number: 4 (lower is better)
Translates to: HAASEEQAEPSPGQCWAQALQTG*VQGRDG
Trigger: TCCATCACGCCCCTGCACGCAGCCAGTCTGCAGGGC...TTGTGCCCAGCATTGCCCGGGTGAGGGCTCTGCCTGTTCCTCTGAAGCAGCGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR GCA 90 bp CAATGCTGGGCACAACGGGGGCAGCCACGGTCCGGACCCCACCTGCAATTCAGTCATCGCAGAGCGGGGTaGTGCCGTCGATGTTGCGAG +
Preference number: 4 (lower is better)
Translates to: QCWAQRGQPRSGPHLQFSHRRAG*CRRCCE
Trigger: CTCGCAACATCGACGGCAGCACCCCGCTCTGCGATG...ACTGAATTGCAGGTGGGGTCCGGACCGTGGCTGCCCCCGTTGTGCCCAGCATTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000459912.5
CDS-3UTR GCA 90 bp CCAGGCCACATCCCAGGCCGACCTTCCGTGGGCCCAGCCATTCCCTATGAGCACGCTTCACACACTCGATaGTGCCCGAGGCGCAGGCAT +
Preference number: 4 (lower is better)
Translates to: PGHIPGRPSVGPAIPYEHASHTR*CPRRRH
Trigger: ATGCCTGCGCCTCGGGCAGCATCGAGTGTGTGAAGC...GTGCTCATAGGGAATGGCTGGGCCCACGGAAGGTCGGCCTGGGATGTGGCCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR GCA 90 bp GAGAGGCCTCCAGTCATACAGCACAAAGGGCATCGCCTTGGGCAGCTCAGGCTCCCGGAGGTGGTGGCCTaGACCTGGGGCCTGTGCATC +
Preference number: 4 (lower is better)
Translates to: ERPPVIQHKGHRLGQLRLPEVVA*TWGLCI
Trigger: GATGCACAGGCCCCAGGTGCAGGCCACCACCTCCGG...GAGCCTGAGCTGCCCAAGGCGATGCCCTTTGTGCTGTATGACTGGAGGCCTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR CCA 90 bp CAATGCTGGGCACAACGGGGGCAGCCACGGTCCGGACCCCACCTGCAATTCAGTCAGGCCGACCTTCCGTaGGCCCAGCCATTCCCTATG +
Preference number: 4 (lower is better)
Translates to: QCWAQRGQPRSGPHLQFSQADLP*AQPFPM
Trigger: CATAGGGAATGGCTGGGCCCACGGAAGGTCGGCCTG...ACTGAATTGCAGGTGGGGTCCGGACCGTGGCTGCCCCCGTTGTGCCCAGCATTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000459912.5
CDS-3UTR TCA 90 bp GCAATGCTGGGCACAACGGGGGCAGCCACGGTCCGGACCCCACCTGCAATTCAGCCGGCCCATGCAGTCTaGATACGCTACCGAATGCTC +
Preference number: 4 (lower is better)
Translates to: AMLGTTGAATVRTPPAIQPAHAV*IRYRML
Trigger: GAGCATTCGGTAGCGTATTCAGACTGCATGGGCCGG...CTGAATTGCAGGTGGGGTCCGGACCGTGGCTGCCCCCGTTGTGCCCAGCATTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000459912.5
CDS-3UTR TCA 90 bp AGCAGCAGTCCCAGGCCACATCCCAGGCCGACCTTCCGTGGGCCCAGCCATTCCCCTGGGTGCATCCAGTaGGTACCACGTTCCCTTTTC +
Preference number: 4 (lower is better)
Translates to: SSSPRPHPRPTFRGPSHSPGCIQ*VPRSLF
Trigger: GAAAAGGGAACGTGGTACTCACTGGATGCACCCAGG...GGAATGGCTGGGCCCACGGAAGGTCGGCCTGGGATGTGGCCTGGGACTGCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR TCA 90 bp CCAGGCCACATCCCAGGCCGACCTTCCGTGGGCCCAGCCATTCCCTATGAGCACACAGCCGTGGGGACCTaGTTCTGCGCTAAGTGCTCT +
Preference number: 4 (lower is better)
Translates to: PGHIPGRPSVGPAIPYEHTAVGT*FCAKCS
Trigger: AGAGCACTTAGCGCAGAATCAGGTCCCCACGGCTGT...GTGCTCATAGGGAATGGCTGGGCCCACGGAAGGTCGGCCTGGGATGTGGCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR GCA 90 bp CAACGGGGGCAGCCACGGTCCGGACCCCACCTGCAATTCAGTTGTAGGAGAGGTTCCCTGAGTGACAGATaGGCGCAGGCTTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: QRGQPRSGPHLQFSCRRGSLSDR*AQAWGW
Trigger: CCAGCCCCAAGCCTGCGCGCATCTGTCACTCAGGGA...ACCTCTCCTACAACTGAATTGCAGGTGGGGTCCGGACCGTGGCTGCCCCCGTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000459912.5
CDS-3UTR GCA 90 bp AAGTCCCTGAGTGACAGATGCGCGCAGGCTTGGGGCTGGGGGATGCCTTGGAAATGGCGGGAGCGCTGCTaGTCCACGTGTAGTCAGACG +
Preference number: 4 (lower is better)
Translates to: KSLSDRCAQAWGWGMPWKWRERC*STCSQT
Trigger: CGTCTGACTACACGTGGAGCAGCAGCGCTCCCGCCA...TTTCCAAGGCATCCCCCAGCCCCAAGCCTGCGCGCATCTGTCACTCAGGGACTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR GCA 90 bp TATGAGCACCGAGGGCAGTCCTGGTGCCGACCCGGAGGTGGTGGCCTGCACCTGGAGAATCAGCAACAATaGCCTCAGTCCCCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: YEHRGQSWCRPGGGGLHLENQQQ*PQSPAL
Trigger: CAGAGCTGGGGACTGAGGGCATTGTTGCTGATTCTC...CAGGTGCAGGCCACCACCTCCGGGTCGGCACCAGGACTGCCCTCGGTGCTCATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR TCA 90 bp CCCGGGCAATGCTGGGCACAACGGGGGCAGCCACGGTCCGGACCCCACCTGCAAAATCTCTTACAAAGATaGAAGGGCAGAACCCAGTGC +
Preference number: 4 (lower is better)
Translates to: PGQCWAQRGQPRSGPHLQNLLQR*KGRTQC
Trigger: GCACTGGGTTCTGCCCTTTCATCTTTGTAAGAGATT...TTGCAGGTGGGGTCCGGACCGTGGCTGCCCCCGTTGTGCCCAGCATTGCCCGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR GCA 90 bp ACCCACAACTGTGACCTGAGACGCAGGCCTTCCCAACACCCTGGAAACATTATCCGCTGGGCTGCCTCGTaGACAGGGGTCCGCTCCACC +
Preference number: 4 (lower is better)
Translates to: THNCDLRRRPSQHPGNIIRWAAS*TGVRST
Trigger: GGTGGAGCGGACCCCTGTGCACGAGGCAGCCCAGCG...GATAATGTTTCCAGGGTGTTGGGAAGGCCTGCGTCTCAGGTCACAGTTGTGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR CCA 90 bp AAGTCCCTGAGTGACAGATGCGCGCAGGCTTGGGGCTGGGGGATGCCTTGGAAAAGTACTCGAAGCACTTaGCGGGAGCGCTGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: KSLSDRCAQAWGWGMPWKSTRST*RERCCS
Trigger: GGAGCAGCAGCGCTCCCGCCAAGTGCTTCGAGTACT...TTTCCAAGGCATCCCCCAGCCCCAAGCCTGCGCGCATCTGTCACTCAGGGACTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR CCA 90 bp CAGTGCTACTTGTGGGGAATACAAAGCCAGGGCCTTCCCCCACAAAGACCCATACCGACCCGGAGGTGGTaGCCTGCACCTGGGGCCTGT +
Preference number: 4 (lower is better)
Translates to: QCYLWGIQSQGLPPQRPIPTRRW*PAPGAC
Trigger: ACAGGCCCCAGGTGCAGGCCACCACCTCCGGGTCGG...TATGGGTCTTTGTGGGGGAAGGCCCTGGCTTTGTATTCCCCACAAGTAGCACTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR TCA 90 bp GAGAGGCCTCCAGTCATACAGCACAAAGGGCATCGCCTTGGGCAGCTCAGGCTCCCCATAGAAAGTCCCTaGGTGACAGATGCGCGCAGG +
Preference number: 4 (lower is better)
Translates to: ERPPVIQHKGHRLGQLRLPIESP*VTDARR
Trigger: CCTGCGCGCATCTGTCACTCAGGGACTTTCTATGGG...GAGCCTGAGCTGCCCAAGGCGATGCCCTTTGTGCTGTATGACTGGAGGCCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR TCA 90 bp GAGAGGCCTCCAGTCATACAGCACAAAGGGCATCGCCTTGGGCAGCTCAGGCTCACAGCCGTGGGGACCTaGTTCTGCGCTAAGTGCTCT +
Preference number: 4 (lower is better)
Translates to: ERPPVIQHKGHRLGQLRLTAVGT*FCAKCS
Trigger: AGAGCACTTAGCGCAGAATCAGGTCCCCACGGCTGT...GAGCCTGAGCTGCCCAAGGCGATGCCCTTTGTGCTGTATGACTGGAGGCCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR GCA 90 bp CGAAGGAGCGTTGTTCTATCTACAGCAATCACGCTGCTTCAGAGGAACAGGCAGCGCTGGGCTGCCTCGTaGACAGGGGTCCGCTCCACC +
Preference number: 4 (lower is better)
Translates to: RRSVVLSTAITLLQRNRQRWAAS*TGVRST
Trigger: GGTGGAGCGGACCCCTGTGCACGAGGCAGCCCAGCG...CTGCCTGTTCCTCTGAAGCAGCGTGATTGCTGTAGATAGAACAACGCTCCTTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR GCA 90 bp TGGTCCGTAAAAGAGGAAAACTGGATGGTTGGGCCCATGCCCATTGAGAGGGTACTCACCCCGCTGGGCTaGCTCGTGCACAGGGGTCCG +
Preference number: 4 (lower is better)
Translates to: WSVKEENWMVGPMPIERVLTPLG*LVHRGP
Trigger: CGGACCCCTGTGCACGAGGCAGCCCAGCGGGGTGAG...TACCCTCTCAATGGGCATGGGCCCAACCATCCAGTTTTCCTCTTTTACGGACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR GCA 90 bp CACAGAGTCTCCAAACAGGCCTTTGCACTGAGAATGCCGAGCCACGAGAATATAGCCGCCAGCAGCAGCTaGACACACCGCGCCTGGCCC +
Preference number: 4 (lower is better)
Translates to: HRVSKQAFALRMPSHENIAASSS*THRAWP
Trigger: GGGCCAGGCGCGGTGTGTGCAGCTGCTGCTGGCGGC...TATATTCTCGTGGCTCGGCATTCTCAGTGCAAAGGCCTGTTTGGAGACTCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR GCA 90 bp CAGTGCTACTTGTGGGGAATACAAAGCCAGGGCCTTCCCCCACAAAGACCCATACCCTCACCCGGGCAATaGTGGGCACAACGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: QCYLWGIQSQGLPPQRPIPSPGQ*WAQRGQ
Trigger: CTGCCCCCGTTGTGCCCAGCATTGCCCGGGTGAGGG...TATGGGTCTTTGTGGGGGAAGGCCCTGGCTTTGTATTCCCCACAAGTAGCACTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR GCA 90 bp TCCCAGGCCACATCCCAGGCCGACCTTCCGTGGGCCCAGCCATTCCCTATGAGCGGATGCCTTGGAAAGTaGTCCAGGAAAAGCATCCAC +
Preference number: 4 (lower is better)
Translates to: SQATSQADLPWAQPFPMSGCLGK*SRKSIH
Trigger: GTGGATGCTTTTCCTGGAGCACTTTCCAAGGCATCC...GCTCATAGGGAATGGCTGGGCCCACGGAAGGTCGGCCTGGGATGTGGCCTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR GCA 90 bp ACAAAGACCCATAGAAAGTCCCTGAGTGACAGATGCGCGCAGGCTTGGGGCTGGTCCCTGAGTGACAGATaGGCGCAGGCTTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: TKTHRKSLSDRCAQAWGWSLSDR*AQAWGW
Trigger: CCAGCCCCAAGCCTGCGCGCATCTGTCACTCAGGGA...CCAGCCCCAAGCCTGCGCGCATCTGTCACTCAGGGACTTTCTATGGGTCTTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR CCA 90 bp ACAAAGCCAGGGCCTTCCCCCACAAAGACCCATAGAAAGTCCCTGAGTGACAGACACCGAGGGCAGTCCTaGTGCCGACCCGGAGGTGGT +
Preference number: 4 (lower is better)
Translates to: TKPGPSPTKTHRKSLSDRHRGQS*CRPGGG
Trigger: ACCACCTCCGGGTCGGCACCAGGACTGCCCTCGGTG...TCTGTCACTCAGGGACTTTCTATGGGTCTTTGTGGGGGAAGGCCCTGGCTTTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR CCA 90 bp ACCCACAACTGTGACCTGAGACGCAGGCCTTCCCAACACCCTGGAAACATTATCCACCGAGGGCAGTCCTaGTGCCGACCCGGAGGTGGT +
Preference number: 4 (lower is better)
Translates to: THNCDLRRRPSQHPGNIIHRGQS*CRPGGG
Trigger: ACCACCTCCGGGTCGGCACCAGGACTGCCCTCGGTG...GATAATGTTTCCAGGGTGTTGGGAAGGCCTGCGTCTCAGGTCACAGTTGTGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR CCA 90 bp GGGAGCGCTGCTGCTCCACGTGTAGTCAGACGGCTTCTTCCCGCGGTTGTCCCGTTTCTTATCCTGCCTTaGCTGCAGAGTCCCATTCCC +
Preference number: 4 (lower is better)
Translates to: GSAAAPRVVRRLLPAVVPFLILP*LQSPIP
Trigger: GGGAATGGGACTCTGCAGCCAAGGCAGGATAAGAAA...CGGGACAACCGCGGGAAGAAGCCGTCTGACTACACGTGGAGCAGCAGCGCTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459912.5
CDS-3UTR TCA 90 bp CCAGGCCACATCCCAGGCCGACCTTCCGTGGGCCCAGCCATTCCCTATGAGCACCGAGAATATACACCTTaGCACACCTTCACACTGCTG +
Preference number: 4 (lower is better)
Translates to: PGHIPGRPSVGPAIPYEHREYTP*HTFTLL
Trigger: CAGCAGTGTGAAGGTGTGTCAAGGTGTATATTCTCG...GTGCTCATAGGGAATGGCTGGGCCCACGGAAGGTCGGCCTGGGATGTGGCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR TCA 90 bp CAATGCTGGGCACAACGGGGGCAGCCACGGTCCGGACCCCACCTGCAATTCAGTCTGGTTTCAAACTCCTaGCCTCAGATGCCCCAGAAA +
Preference number: 4 (lower is better)
Translates to: QCWAQRGQPRSGPHLQFSLVSNS*PQMPQK
Trigger: TTTCTGGGGCATCTGAGGTCAGGAGTTTGAAACCAG...ACTGAATTGCAGGTGGGGTCCGGACCGTGGCTGCCCCCGTTGTGCCCAGCATTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000459912.5
CDS-3UTR TCA 90 bp CAAGTACCCACGCGGAGAGGCCTCCAGTCATACAGCACAAAGGGCATCGCCTTGTCTCCAGGACAGGCGTaGCCTGTTCTCCAGAATGGG +
Preference number: 4 (lower is better)
Translates to: QVPTRRGLQSYSTKGIALSPGQA*PVLQNG
Trigger: CCCATTCTGGAGAACAGGTCACGCCTGTCCTGGAGA...CAAGGCGATGCCCTTTGTGCTGTATGACTGGAGGCCTCTCCGCGTGGGTACTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR TCA 90 bp CACGCTGCTTCAGAGGAACAGGCAGAGCCCTCACCCGGGCAATGCTGGGCACAATCACGGCGGCCAGCATaGAGTTTTTCGCCAGATTTG +
Preference number: 4 (lower is better)
Translates to: HAASEEQAEPSPGQCWAQSRRPA*SFSPDL
Trigger: CAAATCTGGCGAAAAACTTCATGCTGGCCGCCGTGA...TTGTGCCCAGCATTGCCCGGGTGAGGGCTCTGCCTGTTCCTCTGAAGCAGCGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR GCA 90 bp CTGCCTTGGCTGCAGAGTCCCATTCCCGTCCAACTCAAAGCACTGGGACAATGCACTTGGCGGGAGCGCTaGTGCTCCACGTGTAGTCAG +
Preference number: 4 (lower is better)
Translates to: LPWLQSPIPVQLKALGQCTWRER*CSTCSQ
Trigger: CTGACTACACGTGGAGCAGCAGCGCTCCCGCCAAGT...GCATTGTCCCAGTGCTTTGAGTTGGACGGGAATGGGACTCTGCAGCCAAGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR GCA 90 bp GTCTCCAGGACAGGCGTGACCTGTTCTCCAGAATGGGTAGAGATGGGGTTTCATTGCCAGCCTCCTCTGTaGTCCCCACGCCGTCTGTCC +
Preference number: 4 (lower is better)
Translates to: VSRTGVTCSPEWVEMGFHCQPPL*SPRRLS
Trigger: GGACAGACGGCGTGGGGAGCACAGAGGAGGCTGGCA...ATGAAACCCCATCTCTACCCATTCTGGAGAACAGGTCACGCCTGTCCTGGAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR GCA 90 bp CGAAGGAGCGTTGTTCTATCTACAGCAATCACGCTGCTTCAGAGGAACAGGCAGCCGGAGGTGGTGGCCTaGACCTGGGGCCTGTGCATC +
Preference number: 4 (lower is better)
Translates to: RRSVVLSTAITLLQRNRQPEVVA*TWGLCI
Trigger: GATGCACAGGCCCCAGGTGCAGGCCACCACCTCCGG...CTGCCTGTTCCTCTGAAGCAGCGTGATTGCTGTAGATAGAACAACGCTCCTTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR GCA 90 bp CTGGAAACATTATCCAGGATCCAGGAGAGAAGCCTAAACAGGATCGCAGGAAGGCGAGGGCAGTCCTGGTaGCGACCCGGAGGTGGTGGC +
Preference number: 4 (lower is better)
Translates to: LETLSRIQERSLNRIAGRRGQSW*RPGGGG
Trigger: GCCACCACCTCCGGGTCGGCACCAGGACTGCCCTCG...CCTTCCTGCGATCCTGTTTAGGCTTCTCTCCTGGATCCTGGATAATGTTTCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR GCA 90 bp CCCACCCCCAAGTACCCACGCGGAGAGGCCTCCAGTCATACAGCACAAAGGGCACTCCAAACAGGCCTTTaGACTGAGAATGCCGAGCCA +
Preference number: 4 (lower is better)
Translates to: PTPKYPRGEASSHTAQRALQTGL*TENAEP
Trigger: TGGCTCGGCATTCTCAGTGCAAAGGCCTGTTTGGAG...TGCCCTTTGTGCTGTATGACTGGAGGCCTCTCCGCGTGGGTACTTGGGGGTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR CCA 90 bp CCAGGCCACATCCCAGGCCGACCTTCCGTGGGCCCAGCCATTCCCTATGAGCACGGGGTTTCATCAAGTTaGCCAGGCTGGTTTCAAACT +
Preference number: 4 (lower is better)
Translates to: PGHIPGRPSVGPAIPYEHGVSSS*PGWFQT
Trigger: AGTTTGAAACCAGCCTGGCCAACTTGATGAAACCCC...GTGCTCATAGGGAATGGCTGGGCCCACGGAAGGTCGGCCTGGGATGTGGCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR TCA 90 bp AGGATCCAGGAGAGAAGCCTAAACAGGATCGCAGGAAGGGACTCGAAGGAGCGTTGTACAGGGGAGGGTTaGCCTTGGCCCCGTAGGACA +
Preference number: 4 (lower is better)
Translates to: RIQERSLNRIAGRDSKERCTGEG*PWPRRT
Trigger: TGTCCTACGGGGCCAAGGTCAACCCTCCCCTGTACA...ACGCTCCTTCGAGTCCCTTCCTGCGATCCTGTTTAGGCTTCTCTCCTGGATCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR TCA 90 bp GAGAGGCCTCCAGTCATACAGCACAAAGGGCATCGCCTTGGGCAGCTCAGGCTCTCACGGCGGCCAGCATaGAGTTTTTCGCCAGATTTG +
Preference number: 4 (lower is better)
Translates to: ERPPVIQHKGHRLGQLRLSRRPA*SFSPDL
Trigger: CAAATCTGGCGAAAAACTTCATGCTGGCCGCCGTGA...GAGCCTGAGCTGCCCAAGGCGATGCCCTTTGTGCTGTATGACTGGAGGCCTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR GCA 90 bp CTGCAGGACGGGATTGCAAGATTTTCTTATCCTGCCTTGGCTGCAGAGTCCCATGCCCTGCAGACTGGCTaGGTGCAGGGGCGTGATGGA +
Preference number: 4 (lower is better)
Translates to: LQDGIARFSYPALAAESHALQTG*VQGRDG
Trigger: TCCATCACGCCCCTGCACGCAGCCAGTCTGCAGGGC...ATGGGACTCTGCAGCCAAGGCAGGATAAGAAAATCTTGCAATCCCGTCCTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR GCA 90 bp ACAAAGCCAGGGCCTTCCCCCACAAAGACCCATAGAAAGTCCCTGAGTGACAGATCACACACTCGATGCTaGCCGAGGCGCAGGCATCGC +
Preference number: 4 (lower is better)
Translates to: TKPGPSPTKTHRKSLSDRSHTRC*PRRRHR
Trigger: GCGATGCCTGCGCCTCGGGCAGCATCGAGTGTGTGA...TCTGTCACTCAGGGACTTTCTATGGGTCTTTGTGGGGGAAGGCCCTGGCTTTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR GCA 90 bp TCGCAGGAAGGGACTCGAAGGAGCGTTGTTCTATCTACAGCAATCACGCTGCTTTGCCAGCCTCCTCTGTaGTCCCCACGCCGTCTGTCC +
Preference number: 4 (lower is better)
Translates to: SQEGTRRSVVLSTAITLLCQPPL*SPRRLS
Trigger: GGACAGACGGCGTGGGGAGCACAGAGGAGGCTGGCA...AAGCAGCGTGATTGCTGTAGATAGAACAACGCTCCTTCGAGTCCCTTCCTGCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR GCA 90 bp CAACGGGGGCAGCCACGGTCCGGACCCCACCTGCAATTCAGTTGTAGGAGAGGTGACACACCTTCACACTaGTGTCGGTTTGAATGGCTC +
Preference number: 4 (lower is better)
Translates to: QRGQPRSGPHLQFSCRRGDTPSH*CRFEWL
Trigger: GAGCCATTCAAACCGACAGCAGTGTGAAGGTGTGTC...ACCTCTCCTACAACTGAATTGCAGGTGGGGTCCGGACCGTGGCTGCCCCCGTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000459912.5
CDS-3UTR CCA 90 bp TCCAGGACAGGCGTGACCTGTTCTCCAGAATGGGTAGAGATGGGGTTTCATCAAGAGTCCACGGTGACCTaGTTCACGCAGGCGCCGCTC +
Preference number: 4 (lower is better)
Translates to: SRTGVTCSPEWVEMGFHQESTVT*FTQAPL
Trigger: GAGCGGCGCCTGCGTGAACCAGGTCACCGTGGACTC...TTGATGAAACCCCATCTCTACCCATTCTGGAGAACAGGTCACGCCTGTCCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR CCA 90 bp GAAGCACTTGGCGGGAGCGCTGCTGCTCCACGTGTAGTCAGACGGCTTCTTCCCGCGGGATGTTTAACTTaGCAATCTTCTCCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: EALGGSAAAPRVVRRLLPAGCLT*QSSPAL
Trigger: GAGGGCTGGAGAAGATTGCCAAGTTAAACATCCCGC...GGGAAGAAGCCGTCTGACTACACGTGGAGCAGCAGCGCTCCCGCCAAGTGCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459912.5
CDS-3UTR CCA 90 bp CGGTGGGAGGCTCGGGCCGGCCTGGGTGCATCCAGTGAGTACCACGTTCCCTTTTCCAACTCAAAGCACTaGGACAATGCTGGATGTGAT +
Preference number: 4 (lower is better)
Translates to: RWEARAGLGASSEYHVPFSNSKH*DNAGCD
Trigger: ATCACATCCAGCATTGTCCCAGTGCTTTGAGTTGGA...AAAGGGAACGTGGTACTCACTGGATGCACCCAGGCCGGCCCGAGCCTCCCACCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR CCA 90 bp TGGTCCGTAAAAGAGGAAAACTGGATGGTTGGGCCCATGCCCATTGAGAGGGTAAGGCTCGGGCCGGCCTaGGTGCATCCAGTGAGTACC +
Preference number: 4 (lower is better)
Translates to: WSVKEENWMVGPMPIERVRLGPA*VHPVST
Trigger: GGTACTCACTGGATGCACCCAGGCCGGCCCGAGCCT...TACCCTCTCAATGGGCATGGGCCCAACCATCCAGTTTTCCTCTTTTACGGACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR CCA 90 bp AACAATTCCCACAGAGTCTCCAAACAGGCCTTTGCACTGAGAATGCCGAGCCACAGGCTCGGGCCGGCCTaGGTGCATCCAGTGAGTACC +
Preference number: 4 (lower is better)
Translates to: NNSHRVSKQAFALRMPSHRLGPA*VHPVST
Trigger: GGTACTCACTGGATGCACCCAGGCCGGCCCGAGCCT...GTGGCTCGGCATTCTCAGTGCAAAGGCCTGTTTGGAGACTCTGTGGGAATTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR GCA 90 bp TGGTCCGTAAAAGAGGAAAACTGGATGGTTGGGCCCATGCCCATTGAGAGGGTATGCAGACTGGCTGCGTaGAGGGGCGTGATGGAGTCC +
Preference number: 4 (lower is better)
Translates to: WSVKEENWMVGPMPIERVCRLAA*RGVMES
Trigger: GGACTCCATCACGCCCCTGCACGCAGCCAGTCTGCA...TACCCTCTCAATGGGCATGGGCCCAACCATCCAGTTTTCCTCTTTTACGGACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR GCA 90 bp ACGAGAATATACACCTTGACACACCTTCACACTGCTGTCGGTTTGAATGGCTCACACCGCGCCTGGCCCTaGAGACTGGCTGCGTGCAGG +
Preference number: 4 (lower is better)
Translates to: TRIYTLTHLHTAVGLNGSHRAWP*RLAACR
Trigger: CCTGCACGCAGCCAGTCTGCAGGGCCAGGCGCGGTG...TGAGCCATTCAAACCGACAGCAGTGTGAAGGTGTGTCAAGGTGTATATTCTCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR GCA 90 bp ATACGCTACCGAATGCTCCACCTATGGCTTATAATGCAGAACGACCTGTTTCTAGCCGCCAGCAGCAGCTaGACACACCGCGCCTGGCCC +
Preference number: 4 (lower is better)
Translates to: IRYRMLHLWLIMQNDLFLAASSS*THRAWP
Trigger: GGGCCAGGCGCGGTGTGTGCAGCTGCTGCTGGCGGC...TAGAAACAGGTCGTTCTGCATTATAAGCCATAGGTGGAGCATTCGGTAGCGTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR GCA 90 bp TCGCAGGAAGGGACTCGAAGGAGCGTTGTTCTATCTACAGCAATCACGCTGCTTCGCAGAGCGGGGTGCTaGCGTCGATGTTGCGAGCAT +
Preference number: 4 (lower is better)
Translates to: SQEGTRRSVVLSTAITLLRRAGC*RRCCEH
Trigger: ATGCTCGCAACATCGACGGCAGCACCCCGCTCTGCG...AAGCAGCGTGATTGCTGTAGATAGAACAACGCTCCTTCGAGTCCCTTCCTGCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR GCA 90 bp TCGCAGGAAGGGACTCGAAGGAGCGTTGTTCTATCTACAGCAATCACGCTGCTTCATCGCAGAGCGGGGTaGTGCCGTCGATGTTGCGAG +
Preference number: 4 (lower is better)
Translates to: SQEGTRRSVVLSTAITLLHRRAG*CRRCCE
Trigger: CTCGCAACATCGACGGCAGCACCCCGCTCTGCGATG...AAGCAGCGTGATTGCTGTAGATAGAACAACGCTCCTTCGAGTCCCTTCCTGCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR GCA 90 bp CAAGTACCCACGCGGAGAGGCCTCCAGTCATACAGCACAAAGGGCATCGCCTTGAGTCTCATGAAGCTTTaGCGCATTCACGTTGGCCCC +
Preference number: 4 (lower is better)
Translates to: QVPTRRGLQSYSTKGIALSLMKL*RIHVGP
Trigger: GGGGCCAACGTGAATGCGGCAAAGCTTCATGAGACT...CAAGGCGATGCCCTTTGTGCTGTATGACTGGAGGCCTCTCCGCGTGGGTACTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR GCA 90 bp ACCCACAACTGTGACCTGAGACGCAGGCCTTCCCAACACCCTGGAAACATTATCACTTGGCGGGAGCGCTaGTGCTCCACGTGTAGTCAG +
Preference number: 4 (lower is better)
Translates to: THNCDLRRRPSQHPGNIITWRER*CSTCSQ
Trigger: CTGACTACACGTGGAGCAGCAGCGCTCCCGCCAAGT...GATAATGTTTCCAGGGTGTTGGGAAGGCCTGCGTCTCAGGTCACAGTTGTGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR CCA 90 bp AAACAGGCCTTTGCACTGAGAATGCCGAGCCACGAGAATATACACCTTGACACATTGCGAGCATCCACCTaGGCCCCAGCCGCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: KQAFALRMPSHENIHLDTLRAST*APAASS
Trigger: GCTGCTGGCGGCTGGGGCCCAGGTGGATGCTCGCAA...TGTGTCAAGGTGTATATTCTCGTGGCTCGGCATTCTCAGTGCAAAGGCCTGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR CCA 90 bp TCCAGGACAGGCGTGACCTGTTCTCCAGAATGGGTAGAGATGGGGTTTCATCAAGCCCTCGGACGCCAGTaGCCTTCCTCAAGTTCACCC +
Preference number: 4 (lower is better)
Translates to: SRTGVTCSPEWVEMGFHQALGRQ*PSSSSP
Trigger: GGGTGAACTTGAGGAAGGCCACTGGCGTCCGAGGGC...TTGATGAAACCCCATCTCTACCCATTCTGGAGAACAGGTCACGCCTGTCCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR CCA 90 bp CTGGAAACATTATCCAGGATCCAGGAGAGAAGCCTAAACAGGATCGCAGGAAGGAGATGCGCGCAGGCTTaGGGCTGGGGGATGCCTTGG +
Preference number: 4 (lower is better)
Translates to: LETLSRIQERSLNRIAGRRCAQA*GWGMPW
Trigger: CCAAGGCATCCCCCAGCCCCAAGCCTGCGCGCATCT...CCTTCCTGCGATCCTGTTTAGGCTTCTCTCCTGGATCCTGGATAATGTTTCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR CCA 90 bp GCAGAGCCCTCACCCGGGCAATGCTGGGCACAACGGGGGCAGCCACGGTCCGGAACTTTTTACAAGAGTTaGAGACCTAATACTGAAGAC +
Preference number: 4 (lower is better)
Translates to: AEPSPGQCWAQRGQPRSGTFYKS*RPNTED
Trigger: GTCTTCAGTATTAGGTCTCCAACTCTTGTAAAAAGT...TCCGGACCGTGGCTGCCCCCGTTGTGCCCAGCATTGCCCGGGTGAGGGCTCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR CCA 90 bp AACTCCCTGTTGTGGGCGGGGTTCTTAAAATTTATGAAGGCAAAGACTCCTAGGCCACACTGTCTGCGGTaGGAGGCTCGGGCCGGCCTG +
Preference number: 4 (lower is better)
Translates to: NSLLWAGFLKFMKAKTPRPHCLR*EARAGL
Trigger: CAGGCCGGCCCGAGCCTCCCACCGCAGACAGTGTGG...CCTAGGAGTCTTTGCCTTCATAAATTTTAAGAACCCCGCCCACAACAGGGAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR TCA 90 bp CGAAGGAGCGTTGTTCTATCTACAGCAATCACGCTGCTTCAGAGGAACAGGCAGCCCACAACTGTGACCTaGGACGCAGGCCTTCCCAAC +
Preference number: 4 (lower is better)
Translates to: RRSVVLSTAITLLQRNRQPTTVT*DAGLPN
Trigger: GTTGGGAAGGCCTGCGTCTCAGGTCACAGTTGTGGG...CTGCCTGTTCCTCTGAAGCAGCGTGATTGCTGTAGATAGAACAACGCTCCTTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR TCA 90 bp AGCCTAAACAGGATCGCAGGAAGGGACTCGAAGGAGCGTTGTTCTATCTACAGCGGCTGCCCCGGTGAGTaGGAATCAGCAACAATGCCC +
Preference number: 4 (lower is better)
Translates to: SLNRIAGRDSKERCSIYSGCPGE*ESATMP
Trigger: GGGCATTGTTGCTGATTCTCACTCACCGGGGCAGCC...GCTGTAGATAGAACAACGCTCCTTCGAGTCCCTTCCTGCGATCCTGTTTAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR TCA 90 bp ATGCCCATTGAGAGGGTAGGTTCTGTAGAACAGCGCAGGGCCACACCCACAACTAACAGGCCTTTGCACTaGGAATGCCGAGCCACGAGA +
Preference number: 4 (lower is better)
Translates to: MPIERVGSVEQRRATPTTNRPLH*ECRATR
Trigger: TCTCGTGGCTCGGCATTCTCAGTGCAAAGGCCTGTT...AGTTGTGGGTGTGGCCCTGCGCTGTTCTACAGAACCTACCCTCTCAATGGGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR TCA 90 bp CCCACCCCCAAGTACCCACGCGGAGAGGCCTCCAGTCATACAGCACAAAGGGCAGAAACCACTCATCCCTaGACTAATCATGCAAAGTCC +
Preference number: 4 (lower is better)
Translates to: PTPKYPRGEASSHTAQRAETTHP*TNHAKS
Trigger: GGACTTTGCATGATTAGTTCAGGGATGAGTGGTTTC...TGCCCTTTGTGCTGTATGACTGGAGGCCTCTCCGCGTGGGTACTTGGGGGTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR GCA 90 bp CCCACCCCCAAGTACCCACGCGGAGAGGCCTCCAGTCATACAGCACAAAGGGCAACTGCAGGACGGGATTaGAAGATTTTCTTATCCTGC +
Preference number: 4 (lower is better)
Translates to: PTPKYPRGEASSHTAQRATAGRD*KIFLSC
Trigger: GCAGGATAAGAAAATCTTGCAATCCCGTCCTGCAGT...TGCCCTTTGTGCTGTATGACTGGAGGCCTCTCCGCGTGGGTACTTGGGGGTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR CCA 90 bp CCCAACACCCTGGAAACATTATCCAGGATCCAGGAGAGAAGCCTAAACAGGATCCAGGCCGACCTTCCGTaGGCCCAGCCATTCCCTATG +
Preference number: 4 (lower is better)
Translates to: PNTLETLSRIQERSLNRIQADLP*AQPFPM
Trigger: CATAGGGAATGGCTGGGCCCACGGAAGGTCGGCCTG...GATCCTGTTTAGGCTTCTCTCCTGGATCCTGGATAATGTTTCCAGGGTGTTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR TCA 90 bp ACAAAGCCAGGGCCTTCCCCCACAAAGACCCATAGAAAGTCCCTGAGTGACAGATGGGCCCATGCCCATTaGGAGGGTAGGTTCTGTAGA +
Preference number: 4 (lower is better)
Translates to: TKPGPSPTKTHRKSLSDRWAHAH*EGRFCR
Trigger: TCTACAGAACCTACCCTCTCAATGGGCATGGGCCCA...TCTGTCACTCAGGGACTTTCTATGGGTCTTTGTGGGGGAAGGCCCTGGCTTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR TCA 90 bp CACAGAGTCTCCAAACAGGCCTTTGCACTGAGAATGCCGAGCCACGAGAATATAGGCTGCCCCGGTGAGTaGGAATCAGCAACAATGCCC +
Preference number: 4 (lower is better)
Translates to: HRVSKQAFALRMPSHENIGCPGE*ESATMP
Trigger: GGGCATTGTTGCTGATTCTCACTCACCGGGGCAGCC...TATATTCTCGTGGCTCGGCATTCTCAGTGCAAAGGCCTGTTTGGAGACTCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR TCA 90 bp AGGACGGGATTGCAAGATTTTCTTATCCTGCCTTGGCTGCAGAGTCCCATTCCCGGCAGGCTGCCCCGGTaGGTGAGAATCAGCAACAAT +
Preference number: 4 (lower is better)
Translates to: RTGLQDFLILPWLQSPIPGRLPR*VRISNN
Trigger: ATTGTTGCTGATTCTCACTCACCGGGGCAGCCTGCC...GGGAATGGGACTCTGCAGCCAAGGCAGGATAAGAAAATCTTGCAATCCCGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR TCA 90 bp TCCCGTCCAACTCAAAGCACTGGGACAATGCTGGATGTGATAGATGGTCTTACTCCCAGCCATTCCCTATaGGCACCGAGGGCAGTCCTG +
Preference number: 4 (lower is better)
Translates to: SRPTQSTGTMLDVIDGLTPSHSL*APRAVL
Trigger: CAGGACTGCCCTCGGTGCTCATAGGGAATGGCTGGG...AGTAAGACCATCTATCACATCCAGCATTGTCCCAGTGCTTTGAGTTGGACGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR TCA 90 bp AACAATTCCCACAGAGTCTCCAAACAGGCCTTTGCACTGAGAATGCCGAGCCACTCTCCAGGACAGGCGTaGCCTGTTCTCCAGAATGGG +
Preference number: 4 (lower is better)
Translates to: NNSHRVSKQAFALRMPSHSPGQA*PVLQNG
Trigger: CCCATTCTGGAGAACAGGTCACGCCTGTCCTGGAGA...GTGGCTCGGCATTCTCAGTGCAAAGGCCTGTTTGGAGACTCTGTGGGAATTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR GCA 90 bp AAACAGGCCTTTGCACTGAGAATGCCGAGCCACGAGAATATACACCTTGACACATGCTGCCGTCGATGTTaGGAGCATCCACCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: KQAFALRMPSHENIHLDTCCRRC*EHPPGP
Trigger: GGGCCCAGGTGGATGCTCGCAACATCGACGGCAGCA...TGTGTCAAGGTGTATATTCTCGTGGCTCGGCATTCTCAGTGCAAAGGCCTGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR GCA 90 bp CCATTCCCGTCCAACTCAAAGCACTGGGACAATGCTGGATGTGATAGATGGTCTGCTTCACACACTCGATaGTGCCCGAGGCGCAGGCAT +
Preference number: 4 (lower is better)
Translates to: PFPSNSKHWDNAGCDRWSASHTR*CPRRRH
Trigger: ATGCCTGCGCCTCGGGCAGCATCGAGTGTGTGAAGC...AGACCATCTATCACATCCAGCATTGTCCCAGTGCTTTGAGTTGGACGGGAATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR GCA 90 bp GGAGCGTTGTTCTATCTACAGCAATCACGCTGCTTCAGAGGAACAGGCAGAGCCCCAAAATGGCAATCGTaGGCTTCCAGATTGGCCCCG +
Preference number: 4 (lower is better)
Translates to: GALFYLQQSRCFRGTGRAPKWQS*ASRLAP
Trigger: CGGGGCCAATCTGGAAGCGCACGATTGCCATTTTGG...GGCTCTGCCTGTTCCTCTGAAGCAGCGTGATTGCTGTAGATAGAACAACGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR GCA 90 bp ACCCACAACTGTGACCTGAGACGCAGGCCTTCCCAACACCCTGGAAACATTATCTTATCCTGCCTTGGCTaGAGAGTCCCATTCCCGTCC +
Preference number: 4 (lower is better)
Translates to: THNCDLRRRPSQHPGNIILSCLG*RVPFPS
Trigger: GGACGGGAATGGGACTCTGCAGCCAAGGCAGGATAA...GATAATGTTTCCAGGGTGTTGGGAAGGCCTGCGTCTCAGGTCACAGTTGTGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR GCA 90 bp AAGTCCCTGAGTGACAGATGCGCGCAGGCTTGGGGCTGGGGGATGCCTTGGAAAACTGCAGGACGGGATTaGAAGATTTTCTTATCCTGC +
Preference number: 4 (lower is better)
Translates to: KSLSDRCAQAWGWGMPWKTAGRD*KIFLSC
Trigger: GCAGGATAAGAAAATCTTGCAATCCCGTCCTGCAGT...TTTCCAAGGCATCCCCCAGCCCCAAGCCTGCGCGCATCTGTCACTCAGGGACTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR GCA 90 bp AGGATCCAGGAGAGAAGCCTAAACAGGATCGCAGGAAGGGACTCGAAGGAGCGTACTCCTGACCTCAGATaGCCCAGAAACCACTCATCC +
Preference number: 4 (lower is better)
Translates to: RIQERSLNRIAGRDSKERTPDLR*PRNHSS
Trigger: GGATGAGTGGTTTCTGGGGCATCTGAGGTCAGGAGT...ACGCTCCTTCGAGTCCCTTCCTGCGATCCTGTTTAGGCTTCTCTCCTGGATCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR CCA 90 bp CTGCCTTGGCTGCAGAGTCCCATTCCCGTCCAACTCAAAGCACTGGGACAATGCAAGAGGAAAACTGGATaGTTGGGCCCATGCCCATTG +
Preference number: 4 (lower is better)
Translates to: LPWLQSPIPVQLKALGQCKRKTG*LGPCPL
Trigger: CAATGGGCATGGGCCCAACCATCCAGTTTTCCTCTT...GCATTGTCCCAGTGCTTTGAGTTGGACGGGAATGGGACTCTGCAGCCAAGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR CCA 90 bp TTTGAATGGCTCATTACCAAAACCTTAGTGGTACCGCCTACGTGTCCTCTAAAACCGACCCGGAGGTGGTaGCCTGCACCTGGGGCCTGT +
Preference number: 4 (lower is better)
Translates to: FEWLITKTLVVPPTCPLKPTRRW*PAPGAC
Trigger: ACAGGCCCCAGGTGCAGGCCACCACCTCCGGGTCGG...TTTTAGAGGACACGTAGGCGGTACCACTAAGGTTTTGGTAATGAGCCATTCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR CCA 90 bp CTGCAGGACGGGATTGCAAGATTTTCTTATCCTGCCTTGGCTGCAGAGTCCCATCAAAGGGCATCGCCTTaGGCAGCTCAGGCTCACTCT +
Preference number: 4 (lower is better)
Translates to: LQDGIARFSYPALAAESHQRASP*AAQAHS
Trigger: AGAGTGAGCCTGAGCTGCCCAAGGCGATGCCCTTTG...ATGGGACTCTGCAGCCAAGGCAGGATAAGAAAATCTTGCAATCCCGTCCTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR TCA 90 bp CCCAACACCCTGGAAACATTATCCAGGATCCAGGAGAGAAGCCTAAACAGGATCCCCATAGAAAGTCCCTaGGTGACAGATGCGCGCAGG +
Preference number: 4 (lower is better)
Translates to: PNTLETLSRIQERSLNRIPIESP*VTDARR
Trigger: CCTGCGCGCATCTGTCACTCAGGGACTTTCTATGGG...GATCCTGTTTAGGCTTCTCTCCTGGATCCTGGATAATGTTTCCAGGGTGTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR TCA 90 bp ACCTTGACACACCTTCACACTGCTGTCGGTTTGAATGGCTCATTACCAAAACCTGACGAAGACCCGCCATaGCAATGGCGGGAACGCTGG +
Preference number: 4 (lower is better)
Translates to: TLTHLHTAVGLNGSLPKPDEDPP*QWRERW
Trigger: CCAGCGTTCCCGCCATTGTCATGGCGGGTCTTCGTC...AGGTTTTGGTAATGAGCCATTCAAACCGACAGCAGTGTGAAGGTGTGTCAAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR TCA 90 bp AACTCCCTGTTGTGGGCGGGGTTCTTAAAATTTATGAAGGCAAAGACTCCTAGGGACGAAGACCCGCCATaGCAATGGCGGGAACGCTGG +
Preference number: 4 (lower is better)
Translates to: NSLLWAGFLKFMKAKTPRDEDPP*QWRERW
Trigger: CCAGCGTTCCCGCCATTGTCATGGCGGGTCTTCGTC...CCTAGGAGTCTTTGCCTTCATAAATTTTAAGAACCCCGCCCACAACAGGGAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR TCA 90 bp AACAATTCCCACAGAGTCTCCAAACAGGCCTTTGCACTGAGAATGCCGAGCCACTTCCGCCACTTTTATTaGGCAACAGCCGTGGGGACC +
Preference number: 4 (lower is better)
Translates to: NNSHRVSKQAFALRMPSHFRHFY*ATAVGT
Trigger: GGTCCCCACGGCTGTTGCTCAATAAAAGTGGCGGAA...GTGGCTCGGCATTCTCAGTGCAAAGGCCTGTTTGGAGACTCTGTGGGAATTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR GCA 90 bp CCGTCTGTCCTGAGAGTGCCTTTGAGGATGGTCCGTAAAAGAGGAAAACTGGATCTCTCGATCAGCTGTTaGAGCTGCAGGCTCTCACCC +
Preference number: 4 (lower is better)
Translates to: PSVLRVPLRMVRKRGKLDLSISC*SCRLSP
Trigger: GGGTGAGAGCCTGCAGCTGCAACAGCTGATCGAGAG...ATCCAGTTTTCCTCTTTTACGGACCATCCTCAAAGGCACTCTCAGGACAGACGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR GCA 90 bp CTGAATACGCTACCGAATGCTCCACCTATGGCTTATAATGCAGAACGACCTGTTTGCAGACTGGCTGCGTaGAGGGGCGTGATGGAGTCC +
Preference number: 4 (lower is better)
Translates to: LNTLPNAPPMAYNAERPVCRLAA*RGVMES
Trigger: GGACTCCATCACGCCCCTGCACGCAGCCAGTCTGCA...AACAGGTCGTTCTGCATTATAAGCCATAGGTGGAGCATTCGGTAGCGTATTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR GCA 90 bp AGTCTGAATACGCTACCGAATGCTCCACCTATGGCTTATAATGCAGAACGACCTTGCTGCCGTCGATGTTaGGAGCATCCACCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: SLNTLPNAPPMAYNAERPCCRRC*EHPPGP
Trigger: GGGCCCAGGTGGATGCTCGCAACATCGACGGCAGCA...AGGTCGTTCTGCATTATAAGCCATAGGTGGAGCATTCGGTAGCGTATTCAGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR GCA 90 bp ACGAGAATATACACCTTGACACACCTTCACACTGCTGTCGGTTTGAATGGCTCATGGCGGGAGCGCTGCTaGTCCACGTGTAGTCAGACG +
Preference number: 4 (lower is better)
Translates to: TRIYTLTHLHTAVGLNGSWRERC*STCSQT
Trigger: CGTCTGACTACACGTGGAGCAGCAGCGCTCCCGCCA...TGAGCCATTCAAACCGACAGCAGTGTGAAGGTGTGTCAAGGTGTATATTCTCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR CCA 90 bp ATACGCTACCGAATGCTCCACCTATGGCTTATAATGCAGAACGACCTGTTTCTAAGATGCGCGCAGGCTTaGGGCTGGGGGATGCCTTGG +
Preference number: 4 (lower is better)
Translates to: IRYRMLHLWLIMQNDLFLRCAQA*GWGMPW
Trigger: CCAAGGCATCCCCCAGCCCCAAGCCTGCGCGCATCT...TAGAAACAGGTCGTTCTGCATTATAAGCCATAGGTGGAGCATTCGGTAGCGTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR CCA 90 bp CACGCTGCTTCAGAGGAACAGGCAGAGCCCTCACCCGGGCAATGCTGGGCACAATTTAACTCCCTGTTGTaGGCGGGGTTCTTAAAATTT +
Preference number: 4 (lower is better)
Translates to: HAASEEQAEPSPGQCWAQFNSLL*AGFLKF
Trigger: AAATTTTAAGAACCCCGCCCACAACAGGGAGTTAAA...TTGTGCCCAGCATTGCCCGGGTGAGGGCTCTGCCTGTTCCTCTGAAGCAGCGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR CCA 90 bp CACAGAGTCTCCAAACAGGCCTTTGCACTGAGAATGCCGAGCCACGAGAATATACAATGGCGGGAACGCTaGAGTAAAACCTCACGGCGG +
Preference number: 4 (lower is better)
Translates to: HRVSKQAFALRMPSHENIQWRER*SKTSRR
Trigger: CCGCCGTGAGGTTTTACTCCAGCGTTCCCGCCATTG...TATATTCTCGTGGCTCGGCATTCTCAGTGCAAAGGCCTGTTTGGAGACTCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR TCA 90 bp CTGGAAACATTATCCAGGATCCAGGAGAGAAGCCTAAACAGGATCGCAGGAAGGCACCCTGCAGAGCTGTaGCAGAGTCAGAGGTGTCTT +
Preference number: 4 (lower is better)
Translates to: LETLSRIQERSLNRIAGRHPAEL*QSQRCL
Trigger: AAGACACCTCTGACTCTGTCACAGCTCTGCAGGGTG...CCTTCCTGCGATCCTGTTTAGGCTTCTCTCCTGGATCCTGGATAATGTTTCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR TCA 90 bp TCGCAGGAAGGGACTCGAAGGAGCGTTGTTCTATCTACAGCAATCACGCTGCTTAGGAGAGGTAATCAATaGGCCGGGGCGGGATGTTTA +
Preference number: 4 (lower is better)
Translates to: SQEGTRRSVVLSTAITLLRRGNQ*AGAGCL
Trigger: TAAACATCCCGCCCCGGCTCATTGATTACCTCTCCT...AAGCAGCGTGATTGCTGTAGATAGAACAACGCTCCTTCGAGTCCCTTCCTGCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR TCA 90 bp CCGTCTGTCCTGAGAGTGCCTTTGAGGATGGTCCGTAAAAGAGGAAAACTGGATAACAGGCCTTTGCACTaGGAATGCCGAGCCACGAGA +
Preference number: 4 (lower is better)
Translates to: PSVLRVPLRMVRKRGKLDNRPLH*ECRATR
Trigger: TCTCGTGGCTCGGCATTCTCAGTGCAAAGGCCTGTT...ATCCAGTTTTCCTCTTTTACGGACCATCCTCAAAGGCACTCTCAGGACAGACGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR GCA 90 bp CCCAACACCCTGGAAACATTATCCAGGATCCAGGAGAGAAGCCTAAACAGGATCTTATCCTGCCTTGGCTaGAGAGTCCCATTCCCGTCC +
Preference number: 4 (lower is better)
Translates to: PNTLETLSRIQERSLNRILSCLG*RVPFPS
Trigger: GGACGGGAATGGGACTCTGCAGCCAAGGCAGGATAA...GATCCTGTTTAGGCTTCTCTCCTGGATCCTGGATAATGTTTCCAGGGTGTTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR GCA 90 bp CTGCCTTGGCTGCAGAGTCCCATTCCCGTCCAACTCAAAGCACTGGGACAATGCGAAGAGAGTAAGCTCTaGACTCCTCAACTTTCTCAC +
Preference number: 4 (lower is better)
Translates to: LPWLQSPIPVQLKALGQCEESKL*TPQLSH
Trigger: GTGAGAAAGTTGAGGAGTGCAGAGCTTACTCTCTTC...GCATTGTCCCAGTGCTTTGAGTTGGACGGGAATGGGACTCTGCAGCCAAGGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459912.5
CDS-3UTR CCA 90 bp CAGTGCTACTTGTGGGGAATACAAAGCCAGGGCCTTCCCCCACAAAGACCCATAGCCTTCCCAACACCCTaGAAACATTATCCAGGATCC +
Preference number: 4 (lower is better)
Translates to: QCYLWGIQSQGLPPQRPIAFPTP*KHYPGS
Trigger: GGATCCTGGATAATGTTTCCAGGGTGTTGGGAAGGC...TATGGGTCTTTGTGGGGGAAGGCCCTGGCTTTGTATTCCCCACAAGTAGCACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR CCA 90 bp TGCTGTCGGTTTGAATGGCTCATTACCAAAACCTTAGTGGTACCGCCTACGTGTCAAAGGGCATCGCCTTaGGCAGCTCAGGCTCACTCT +
Preference number: 4 (lower is better)
Translates to: CCRFEWLITKTLVVPPTCQRASP*AAQAHS
Trigger: AGAGTGAGCCTGAGCTGCCCAAGGCGATGCCCTTTG...ACACGTAGGCGGTACCACTAAGGTTTTGGTAATGAGCCATTCAAACCGACAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR TCA 90 bp GAACGACCTGTTTCTATCACTGCAGGACGGGATTGCAAGATTTTCTTATCCTGCGGCAGGCTGCCCCGGTaGGTGAGAATCAGCAACAAT +
Preference number: 4 (lower is better)
Translates to: ERPVSITAGRDCKIFLSCGRLPR*VRISNN
Trigger: ATTGTTGCTGATTCTCACTCACCGGGGCAGCCTGCC...GCAGGATAAGAAAATCTTGCAATCCCGTCCTGCAGTGATAGAAACAGGTCGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR TCA 90 bp TTTGAATGGCTCATTACCAAAACCTTAGTGGTACCGCCTACGTGTCCTCTAAAACCCAGCCATTCCCTATaGGCACCGAGGGCAGTCCTG +
Preference number: 4 (lower is better)
Translates to: FEWLITKTLVVPPTCPLKPSHSL*APRAVL
Trigger: CAGGACTGCCCTCGGTGCTCATAGGGAATGGCTGGG...TTTTAGAGGACACGTAGGCGGTACCACTAAGGTTTTGGTAATGAGCCATTCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR TCA 90 bp AGCCTAAACAGGATCGCAGGAAGGGACTCGAAGGAGCGTTGTTCTATCTACAGCCTGGTTTCAAACTCCTaGCCTCAGATGCCCCAGAAA +
Preference number: 4 (lower is better)
Translates to: SLNRIAGRDSKERCSIYSLVSNS*PQMPQK
Trigger: TTTCTGGGGCATCTGAGGTCAGGAGTTTGAAACCAG...GCTGTAGATAGAACAACGCTCCTTCGAGTCCCTTCCTGCGATCCTGTTTAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR TCA 90 bp AGGATCCAGGAGAGAAGCCTAAACAGGATCGCAGGAAGGGACTCGAAGGAGCGTAATCTCTTACAAAGATaGAAGGGCAGAACCCAGTGC +
Preference number: 4 (lower is better)
Translates to: RIQERSLNRIAGRDSKERNLLQR*KGRTQC
Trigger: GCACTGGGTTCTGCCCTTTCATCTTTGTAAGAGATT...ACGCTCCTTCGAGTCCCTTCCTGCGATCCTGTTTAGGCTTCTCTCCTGGATCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR GCA 90 bp TGGTCCGTAAAAGAGGAAAACTGGATGGTTGGGCCCATGCCCATTGAGAGGGTACTACAGCAATCACGCTaGTTCAGAGGAACAGGCAGA +
Preference number: 4 (lower is better)
Translates to: WSVKEENWMVGPMPIERVLQQSR*FRGTGR
Trigger: TCTGCCTGTTCCTCTGAAGCAGCGTGATTGCTGTAG...TACCCTCTCAATGGGCATGGGCCCAACCATCCAGTTTTCCTCTTTTACGGACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR GCA 90 bp ATGCCCATTGAGAGGGTAGGTTCTGTAGAACAGCGCAGGGCCACACCCACAACTACCTGTTTCTATCACTaGAGGACGGGATTGCAAGAT +
Preference number: 4 (lower is better)
Translates to: MPIERVGSVEQRRATPTTTCFYH*RTGLQD
Trigger: ATCTTGCAATCCCGTCCTGCAGTGATAGAAACAGGT...AGTTGTGGGTGTGGCCCTGCGCTGTTCTACAGAACCTACCCTCTCAATGGGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR GCA 90 bp CCTGCCTTGGCTGCAGAGTCCCATTCCCGTCCAACTCAAAGCACTGGGACAATGAGACATTCATCAAGCTaGATTGAGCAGCACTTTGAC +
Preference number: 4 (lower is better)
Translates to: PALAAESHSRPTQSTGTMRHSSS*IEQHFD
Trigger: GTCAAAGTGCTGCTCAATGCAGCTTGATGAATGTCT...CATTGTCCCAGTGCTTTGAGTTGGACGGGAATGGGACTCTGCAGCCAAGGCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459912.5
CDS-3UTR CCA 90 bp GACAGGCGTGACCTGTTCTCCAGAATGGGTAGAGATGGGGTTTCATCAAGTTGGGCGGGATGTTTAACTTaGCAATCTTCTCCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: DRRDLFSRMGRDGVSSSWAGCLT*QSSPAL
Trigger: GAGGGCTGGAGAAGATTGCCAAGTTAAACATCCCGC...CCAACTTGATGAAACCCCATCTCTACCCATTCTGGAGAACAGGTCACGCCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR CCA 90 bp TGGTCCGTAAAAGAGGAAAACTGGATGGTTGGGCCCATGCCCATTGAGAGGGTAGCCTTCCCAACACCCTaGAAACATTATCCAGGATCC +
Preference number: 4 (lower is better)
Translates to: WSVKEENWMVGPMPIERVAFPTP*KHYPGS
Trigger: GGATCCTGGATAATGTTTCCAGGGTGTTGGGAAGGC...TACCCTCTCAATGGGCATGGGCCCAACCATCCAGTTTTCCTCTTTTACGGACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR CCA 90 bp TCGCAGGAAGGGACTCGAAGGAGCGTTGTTCTATCTACAGCAATCACGCTGCTTACTCAGTGCTACTTGTaGGGAATACAAAGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: SQEGTRRSVVLSTAITLLTQCYL*GIQSQG
Trigger: GCCCTGGCTTTGTATTCCCCACAAGTAGCACTGAGT...AAGCAGCGTGATTGCTGTAGATAGAACAACGCTCCTTCGAGTCCCTTCCTGCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR CCA 90 bp CAAGTACCCACGCGGAGAGGCCTCCAGTCATACAGCACAAAGGGCATCGCCTTGTGCTGTCGGTTTGAATaGCTCATTACCAAAACCTTA +
Preference number: 4 (lower is better)
Translates to: QVPTRRGLQSYSTKGIALCCRFE*LITKTL
Trigger: TAAGGTTTTGGTAATGAGCCATTCAAACCGACAGCA...CAAGGCGATGCCCTTTGTGCTGTATGACTGGAGGCCTCTCCGCGTGGGTACTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR CCA 90 bp CTGCAGGACGGGATTGCAAGATTTTCTTATCCTGCCTTGGCTGCAGAGTCCCATTTTCTTATCCTGCCTTaGCTGCAGAGTCCCATTCCC +
Preference number: 4 (lower is better)
Translates to: LQDGIARFSYPALAAESHFLILP*LQSPIP
Trigger: GGGAATGGGACTCTGCAGCCAAGGCAGGATAAGAAA...ATGGGACTCTGCAGCCAAGGCAGGATAAGAAAATCTTGCAATCCCGTCCTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR CCA 90 bp AAACTCAGTGCTACTTGTGGGGAATACAAAGCCAGGGCCTTCCCCCACAAAGACTCAAGTTGGCCAGGCTaGTTTCAAACTCCTGACCTC +
Preference number: 4 (lower is better)
Translates to: KLSATCGEYKARAFPHKDSSWPG*FQTPDL
Trigger: GAGGTCAGGAGTTTGAAACCAGCCTGGCCAACTTGA...GTCTTTGTGGGGGAAGGCCCTGGCTTTGTATTCCCCACAAGTAGCACTGAGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
3UTR CAA 72 bp CCTAAACAGGATCGCAGGAAGGGACTCGAAGGAGCGTaGTTCTATCTACAGCAATCACGCTGCTTCAGAGGA +
Preference number: 4 (lower is better)
Translates to: PKQDRRKGLEGA*FYLQQSRCFRG
Trigger: TCCTCTGAAGCAGCGTGATTGCTGTAGATAGAACAACGCTCCTTCGAGTCCCTTCCTGCGATCCTGTTTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR TCA 90 bp AACTCCCTGTTGTGGGCGGGGTTCTTAAAATTTATGAAGGCAAAGACTCCTAGGCACCCTGCAGAGCTGTaGCAGAGTCAGAGGTGTCTT +
Preference number: 4 (lower is better)
Translates to: NSLLWAGFLKFMKAKTPRHPAEL*QSQRCL
Trigger: AAGACACCTCTGACTCTGTCACAGCTCTGCAGGGTG...CCTAGGAGTCTTTGCCTTCATAAATTTTAAGAACCCCGCCCACAACAGGGAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR TCA 90 bp AGTCTGAATACGCTACCGAATGCTCCACCTATGGCTTATAATGCAGAACGACCTTGGGCCCATGCCCATTaGGAGGGTAGGTTCTGTAGA +
Preference number: 4 (lower is better)
Translates to: SLNTLPNAPPMAYNAERPWAHAH*EGRFCR
Trigger: TCTACAGAACCTACCCTCTCAATGGGCATGGGCCCA...AGGTCGTTCTGCATTATAAGCCATAGGTGGAGCATTCGGTAGCGTATTCAGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR TCA 90 bp AAACTCAGTGCTACTTGTGGGGAATACAAAGCCAGGGCCTTCCCCCACAAAGACCGAGAATATACACCTTaGCACACCTTCACACTGCTG +
Preference number: 4 (lower is better)
Translates to: KLSATCGEYKARAFPHKDREYTP*HTFTLL
Trigger: CAGCAGTGTGAAGGTGTGTCAAGGTGTATATTCTCG...GTCTTTGTGGGGGAAGGCCCTGGCTTTGTATTCCCCACAAGTAGCACTGAGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR TCA 90 bp GAACGACCTGTTTCTATCACTGCAGGACGGGATTGCAAGATTTTCTTATCCTGCCCTGGGTGCATCCAGTaGGTACCACGTTCCCTTTTC +
Preference number: 4 (lower is better)
Translates to: ERPVSITAGRDCKIFLSCPGCIQ*VPRSLF
Trigger: GAAAAGGGAACGTGGTACTCACTGGATGCACCCAGG...GCAGGATAAGAAAATCTTGCAATCCCGTCCTGCAGTGATAGAAACAGGTCGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR TCA 90 bp CCATGCAGTCTGAATACGCTACCGAATGCTCCACCTATGGCTTATAATGCAGAATTCCGCCACTTTTATTaGGCAACAGCCGTGGGGACC +
Preference number: 4 (lower is better)
Translates to: PCSLNTLPNAPPMAYNAEFRHFY*ATAVGT
Trigger: GGTCCCCACGGCTGTTGCTCAATAAAAGTGGCGGAA...TTCTGCATTATAAGCCATAGGTGGAGCATTCGGTAGCGTATTCAGACTGCATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR GCA 90 bp CCATGCAGTCTGAATACGCTACCGAATGCTCCACCTATGGCTTATAATGCAGAAGGTCCGGACCCCACCTaGAATTCAGTTGTAGGAGAG +
Preference number: 4 (lower is better)
Translates to: PCSLNTLPNAPPMAYNAEGPDPT*NSVVGE
Trigger: CTCTCCTACAACTGAATTGCAGGTGGGGTCCGGACC...TTCTGCATTATAAGCCATAGGTGGAGCATTCGGTAGCGTATTCAGACTGCATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR CCA 90 bp CACAGAGTCTCCAAACAGGCCTTTGCACTGAGAATGCCGAGCCACGAGAATATAAAGAGGAAAACTGGATaGTTGGGCCCATGCCCATTG +
Preference number: 4 (lower is better)
Translates to: HRVSKQAFALRMPSHENIKRKTG*LGPCPL
Trigger: CAATGGGCATGGGCCCAACCATCCAGTTTTCCTCTT...TATATTCTCGTGGCTCGGCATTCTCAGTGCAAAGGCCTGTTTGGAGACTCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR CCA 90 bp CACAGAGTCTCCAAACAGGCCTTTGCACTGAGAATGCCGAGCCACGAGAATATAACTCAGTGCTACTTGTaGGGAATACAAAGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: HRVSKQAFALRMPSHENITQCYL*GIQSQG
Trigger: GCCCTGGCTTTGTATTCCCCACAAGTAGCACTGAGT...TATATTCTCGTGGCTCGGCATTCTCAGTGCAAAGGCCTGTTTGGAGACTCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR CCA 90 bp GTCTCCAGGACAGGCGTGACCTGTTCTCCAGAATGGGTAGAGATGGGGTTTCATCGAATGCTCCACCTATaGCTTATAATGCAGAACGAC +
Preference number: 4 (lower is better)
Translates to: VSRTGVTCSPEWVEMGFHRMLHL*LIMQND
Trigger: GTCGTTCTGCATTATAAGCCATAGGTGGAGCATTCG...ATGAAACCCCATCTCTACCCATTCTGGAGAACAGGTCACGCCTGTCCTGGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR CCA 90 bp CCTGCCTTGGCTGCAGAGTCCCATTCCCGTCCAACTCAAAGCACTGGGACAATGTTTAACTCCCTGTTGTaGGCGGGGTTCTTAAAATTT +
Preference number: 4 (lower is better)
Translates to: PALAAESHSRPTQSTGTMFNSLL*AGFLKF
Trigger: AAATTTTAAGAACCCCGCCCACAACAGGGAGTTAAA...CATTGTCCCAGTGCTTTGAGTTGGACGGGAATGGGACTCTGCAGCCAAGGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR CCA 90 bp AGGGACTCGAAGGAGCGTTGTTCTATCTACAGCAATCACGCTGCTTCAGAGGAATCAAGTTGGCCAGGCTaGTTTCAAACTCCTGACCTC +
Preference number: 4 (lower is better)
Translates to: RDSKERCSIYSNHAASEESSWPG*FQTPDL
Trigger: GAGGTCAGGAGTTTGAAACCAGCCTGGCCAACTTGA...TTCCTCTGAAGCAGCGTGATTGCTGTAGATAGAACAACGCTCCTTCGAGTCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR CCA 90 bp TCCCGTCCAACTCAAAGCACTGGGACAATGCTGGATGTGATAGATGGTCTTACTATTGAGCAACAGCCGTaGGGACCTGATTCTGCGCTA +
Preference number: 4 (lower is better)
Translates to: SRPTQSTGTMLDVIDGLTIEQQP*GPDSAL
Trigger: TAGCGCAGAATCAGGTCCCCACGGCTGTTGCTCAAT...AGTAAGACCATCTATCACATCCAGCATTGTCCCAGTGCTTTGAGTTGGACGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR TCA 90 bp AGCCTAAACAGGATCGCAGGAAGGGACTCGAAGGAGCGTTGTTCTATCTACAGCGAAACCACTCATCCCTaGACTAATCATGCAAAGTCC +
Preference number: 4 (lower is better)
Translates to: SLNRIAGRDSKERCSIYSETTHP*TNHAKS
Trigger: GGACTTTGCATGATTAGTTCAGGGATGAGTGGTTTC...GCTGTAGATAGAACAACGCTCCTTCGAGTCCCTTCCTGCGATCCTGTTTAGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR GCA 90 bp TTTGAATGGCTCATTACCAAAACCTTAGTGGTACCGCCTACGTGTCCTCTAAAACTCTCGATCAGCTGTTaGAGCTGCAGGCTCTCACCC +
Preference number: 4 (lower is better)
Translates to: FEWLITKTLVVPPTCPLKLSISC*SCRLSP
Trigger: GGGTGAGAGCCTGCAGCTGCAACAGCTGATCGAGAG...TTTTAGAGGACACGTAGGCGGTACCACTAAGGTTTTGGTAATGAGCCATTCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR GCA 90 bp ATACGCTACCGAATGCTCCACCTATGGCTTATAATGCAGAACGACCTGTTTCTAGGTCCGGACCCCACCTaGAATTCAGTTGTAGGAGAG +
Preference number: 4 (lower is better)
Translates to: IRYRMLHLWLIMQNDLFLGPDPT*NSVVGE
Trigger: CTCTCCTACAACTGAATTGCAGGTGGGGTCCGGACC...TAGAAACAGGTCGTTCTGCATTATAAGCCATAGGTGGAGCATTCGGTAGCGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR GCA 90 bp AACTCCCTGTTGTGGGCGGGGTTCTTAAAATTTATGAAGGCAAAGACTCCTAGGCTCCAAACAGGCCTTTaGACTGAGAATGCCGAGCCA +
Preference number: 4 (lower is better)
Translates to: NSLLWAGFLKFMKAKTPRLQTGL*TENAEP
Trigger: TGGCTCGGCATTCTCAGTGCAAAGGCCTGTTTGGAG...CCTAGGAGTCTTTGCCTTCATAAATTTTAAGAACCCCGCCCACAACAGGGAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR GCA 90 bp AAACTCAGTGCTACTTGTGGGGAATACAAAGCCAGGGCCTTCCCCCACAAAGACAAGATTTTCTTATCCTaGCTTGGCTGCAGAGTCCCA +
Preference number: 4 (lower is better)
Translates to: KLSATCGEYKARAFPHKDKIFLS*LGCRVP
Trigger: TGGGACTCTGCAGCCAAGGCAGGATAAGAAAATCTT...GTCTTTGTGGGGGAAGGCCCTGGCTTTGTATTCCCCACAAGTAGCACTGAGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR GCA 90 bp AGTCTGAATACGCTACCGAATGCTCCACCTATGGCTTATAATGCAGAACGACCTACTCCTGACCTCAGATaGCCCAGAAACCACTCATCC +
Preference number: 4 (lower is better)
Translates to: SLNTLPNAPPMAYNAERPTPDLR*PRNHSS
Trigger: GGATGAGTGGTTTCTGGGGCATCTGAGGTCAGGAGT...AGGTCGTTCTGCATTATAAGCCATAGGTGGAGCATTCGGTAGCGTATTCAGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR CCA 90 bp CTGGAAACATTATCCAGGATCCAGGAGAGAAGCCTAAACAGGATCGCAGGAAGGGGGGTTTCATCAAGTTaGCCAGGCTGGTTTCAAACT +
Preference number: 4 (lower is better)
Translates to: LETLSRIQERSLNRIAGRGVSSS*PGWFQT
Trigger: AGTTTGAAACCAGCCTGGCCAACTTGATGAAACCCC...CCTTCCTGCGATCCTGTTTAGGCTTCTCTCCTGGATCCTGGATAATGTTTCCAG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
3UTR CAA 72 bp TGCAGAACGACCTGTTTCTATCACTGCAGGACGGGATaGCAAGATTTTCTTATCCTGCCTTGGCTGCAGAGT +
Preference number: 4 (lower is better)
Translates to: CRTTCFYHCRTG*QDFLILPWLQS
Trigger: ACTCTGCAGCCAAGGCAGGATAAGAAAATCTTGCAATCCCGTCCTGCAGTGATAGAAACAGGTCGTTCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR GCA 90 bp TTGCTAGAGGCAAGAATCTCTTACAAAGATGAAAGGGCAGAACCCAGTGCTTTTCCAAAATGGCAATCGTaGGCTTCCAGATTGGCCCCG +
Preference number: 4 (lower is better)
Translates to: LLEARISYKDERAEPSAFPKWQS*ASRLAP
Trigger: CGGGGCCAATCTGGAAGCGCACGATTGCCATTTTGG...AAAAGCACTGGGTTCTGCCCTTTCATCTTTGTAAGAGATTCTTGCCTCTAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR GCA 90 bp ATACGCTACCGAATGCTCCACCTATGGCTTATAATGCAGAACGACCTGTTTCTAAGTCTCATGAAGCTTTaGCGCATTCACGTTGGCCCC +
Preference number: 4 (lower is better)
Translates to: IRYRMLHLWLIMQNDLFLSLMKL*RIHVGP
Trigger: GGGGCCAACGTGAATGCGGCAAAGCTTCATGAGACT...TAGAAACAGGTCGTTCTGCATTATAAGCCATAGGTGGAGCATTCGGTAGCGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR GCA 90 bp AGTCTGAATACGCTACCGAATGCTCCACCTATGGCTTATAATGCAGAACGACCTCTACAGCAATCACGCTaGTTCAGAGGAACAGGCAGA +
Preference number: 4 (lower is better)
Translates to: SLNTLPNAPPMAYNAERPLQQSR*FRGTGR
Trigger: TCTGCCTGTTCCTCTGAAGCAGCGTGATTGCTGTAG...AGGTCGTTCTGCATTATAAGCCATAGGTGGAGCATTCGGTAGCGTATTCAGACT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR GCA 90 bp ATACGCTACCGAATGCTCCACCTATGGCTTATAATGCAGAACGACCTGTTTCTAGAGAATCAGCAACAATaGCCTCAGTCCCCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: IRYRMLHLWLIMQNDLFLENQQQ*PQSPAL
Trigger: CAGAGCTGGGGACTGAGGGCATTGTTGCTGATTCTC...TAGAAACAGGTCGTTCTGCATTATAAGCCATAGGTGGAGCATTCGGTAGCGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR GCA 90 bp AGGGACTCGAAGGAGCGTTGTTCTATCTACAGCAATCACGCTGCTTCAGAGGAAAAGATTTTCTTATCCTaGCTTGGCTGCAGAGTCCCA +
Preference number: 4 (lower is better)
Translates to: RDSKERCSIYSNHAASEEKIFLS*LGCRVP
Trigger: TGGGACTCTGCAGCCAAGGCAGGATAAGAAAATCTT...TTCCTCTGAAGCAGCGTGATTGCTGTAGATAGAACAACGCTCCTTCGAGTCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR CCA 90 bp CTGGAAACATTATCCAGGATCCAGGAGAGAAGCCTAAACAGGATCGCAGGAAGGTCCAACTCAAAGCACTaGGACAATGCTGGATGTGAT +
Preference number: 4 (lower is better)
Translates to: LETLSRIQERSLNRIAGRSNSKH*DNAGCD
Trigger: ATCACATCCAGCATTGTCCCAGTGCTTTGAGTTGGA...CCTTCCTGCGATCCTGTTTAGGCTTCTCTCCTGGATCCTGGATAATGTTTCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR CCA 90 bp TTGCTAGAGGCAAGAATCTCTTACAAAGATGAAAGGGCAGAACCCAGTGCTTTTATTGAGCAACAGCCGTaGGGACCTGATTCTGCGCTA +
Preference number: 4 (lower is better)
Translates to: LLEARISYKDERAEPSAFIEQQP*GPDSAL
Trigger: TAGCGCAGAATCAGGTCCCCACGGCTGTTGCTCAAT...AAAAGCACTGGGTTCTGCCCTTTCATCTTTGTAAGAGATTCTTGCCTCTAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR GCA 90 bp TTGCTAGAGGCAAGAATCTCTTACAAAGATGAAAGGGCAGAACCCAGTGCTTTTGGATGCCTTGGAAAGTaGTCCAGGAAAAGCATCCAC +
Preference number: 4 (lower is better)
Translates to: LLEARISYKDERAEPSAFGCLGK*SRKSIH
Trigger: GTGGATGCTTTTCCTGGAGCACTTTCCAAGGCATCC...AAAAGCACTGGGTTCTGCCCTTTCATCTTTGTAAGAGATTCTTGCCTCTAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR GCA 90 bp TTTGAATGGCTCATTACCAAAACCTTAGTGGTACCGCCTACGTGTCCTCTAAAAGACACACCTTCACACTaGTGTCGGTTTGAATGGCTC +
Preference number: 4 (lower is better)
Translates to: FEWLITKTLVVPPTCPLKDTPSH*CRFEWL
Trigger: GAGCCATTCAAACCGACAGCAGTGTGAAGGTGTGTC...TTTTAGAGGACACGTAGGCGGTACCACTAAGGTTTTGGTAATGAGCCATTCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR GCA 90 bp CTGAATACGCTACCGAATGCTCCACCTATGGCTTATAATGCAGAACGACCTGTTACCTGTTTCTATCACTaGAGGACGGGATTGCAAGAT +
Preference number: 4 (lower is better)
Translates to: LNTLPNAPPMAYNAERPVTCFYH*RTGLQD
Trigger: ATCTTGCAATCCCGTCCTGCAGTGATAGAAACAGGT...AACAGGTCGTTCTGCATTATAAGCCATAGGTGGAGCATTCGGTAGCGTATTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR CCA 90 bp AACTCCCTGTTGTGGGCGGGGTTCTTAAAATTTATGAAGGCAAAGACTCCTAGGCGAATGCTCCACCTATaGCTTATAATGCAGAACGAC +
Preference number: 4 (lower is better)
Translates to: NSLLWAGFLKFMKAKTPRRMLHL*LIMQND
Trigger: GTCGTTCTGCATTATAAGCCATAGGTGGAGCATTCG...CCTAGGAGTCTTTGCCTTCATAAATTTTAAGAACCCCGCCCACAACAGGGAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR CCA 90 bp ACCTTGACACACCTTCACACTGCTGTCGGTTTGAATGGCTCATTACCAAAACCTTGCTGTCGGTTTGAATaGCTCATTACCAAAACCTTA +
Preference number: 4 (lower is better)
Translates to: TLTHLHTAVGLNGSLPKPCCRFE*LITKTL
Trigger: TAAGGTTTTGGTAATGAGCCATTCAAACCGACAGCA...AGGTTTTGGTAATGAGCCATTCAAACCGACAGCAGTGTGAAGGTGTGTCAAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR CCA 90 bp TGCTGTCGGTTTGAATGGCTCATTACCAAAACCTTAGTGGTACCGCCTACGTGTACTTTTTACAAGAGTTaGAGACCTAATACTGAAGAC +
Preference number: 4 (lower is better)
Translates to: CCRFEWLITKTLVVPPTCTFYKS*RPNTED
Trigger: GTCTTCAGTATTAGGTCTCCAACTCTTGTAAAAAGT...ACACGTAGGCGGTACCACTAAGGTTTTGGTAATGAGCCATTCAAACCGACAGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS GCA 90 bp AACCCACGTCGCCCAGGAAGCAGCCGTCCGCCGCCCGGGGCTCCATaGGGCTCACCGGCGGCCGCGCGGCGACTCTGGGCGCCGGGACCT +
Preference number: 5 (lower is better)
Translates to: NPRRPGSSRPPPGAP*GSPAAARRLWAPGP
Trigger: AGGTCCCGGCGCCCAGAGTCGCCGCGCGGCCGCCGGTGAGCCGCATGGAGCCCCGGGCGGCGGACGGCTGCTTCCTGGGCGACGTGGGTT
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000479033.1
CDS GCA 90 bp TGGGCCCCAGCCGCCAGCAGCAGCTGCACACACCGCGCCTGGCCCTaGAGACTGGCTGCGTGCAGGGGCGTGATGGAGTCCACGGTGACC +
Preference number: 5 (lower is better)
Translates to: WAPAASSSCTHRAWP*RLAACRGVMESTVT
Trigger: GGTCACCGTGGACTCCATCACGCCCCTGCACGCAGCCAGTCTGCAGGGCCAGGCGCGGTGTGTGCAGCTGCTGCTGGCGGCTGGGGCCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357700.11
ENST00000459912.5
ENST00000479033.1
CDS-3UTR CAA 90 bp GCAGAGCCCTCACCCGGGCAATGCTGGGCACAACGGGGGCAGCCACGGTCCGGACAGATGCGCGCAGGCTaGGGGCTGGGGGATGCCTTG +
Preference number: 5 (lower is better)
Translates to: AEPSPGQCWAQRGQPRSGQMRAG*GLGDAL
Trigger: CAAGGCATCCCCCAGCCCCAAGCCTGCGCGCATCTG...TCCGGACCGTGGCTGCCCCCGTTGTGCCCAGCATTGCCCGGGTGAGGGCTCTGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS GCA 90 bp CACACTCGATGCTGCCCGAGGCGCAGGCATCGCAGAGCGGGGTGCTaGCGTCGATGTTGCGAGCATCCACCTGGGCCCCAGCCGCCAGCA +
Preference number: 5 (lower is better)
Translates to: HTRCCPRRRHRRAGC*RRCCEHPPGPQPPA
Trigger: TGCTGGCGGCTGGGGCCCAGGTGGATGCTCGCAACATCGACGGCAGCACCCCGCTCTGCGATGCCTGCGCCTCGGGCAGCATCGAGTGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR CAA 90 bp GCAGAGCCCTCACCCGGGCAATGCTGGGCACAACGGGGGCAGCCACGGTCCGGAGTGCTGCCGTCGATGTaGCGAGCATCCACCTGGGCC +
Preference number: 5 (lower is better)
Translates to: AEPSPGQCWAQRGQPRSGVLPSM*RASTWA
Trigger: GGCCCAGGTGGATGCTCGCAACATCGACGGCAGCAC...TCCGGACCGTGGCTGCCCCCGTTGTGCCCAGCATTGCCCGGGTGAGGGCTCTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS GCA 90 bp TCACACACTCGATGCTGCCCGAGGCGCAGGCATCGCAGAGCGGGGTaGTGCCGTCGATGTTGCGAGCATCCACCTGGGCCCCAGCCGCCA +
Preference number: 5 (lower is better)
Translates to: SHTRCCPRRRHRRAG*CRRCCEHPPGPQPP
Trigger: TGGCGGCTGGGGCCCAGGTGGATGCTCGCAACATCGACGGCAGCACCCCGCTCTGCGATGCCTGCGCCTCGGGCAGCATCGAGTGTGTGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS GCA 90 bp GCTCTCGATCAGCTGTTGCAGCTGCAGGCTCTCACCCCGCTGGGCTaGCTCGTGCACAGGGGTCCGCTCCACCCAGAAACCCACGTCGCC +
Preference number: 5 (lower is better)
Translates to: ALDQLLQLQALTPLG*LVHRGPLHPETHVA
Trigger: GGCGACGTGGGTTTCTGGGTGGAGCGGACCCCTGTGCACGAGGCAGCCCAGCGGGGTGAGAGCCTGCAGCTGCAACAGCTGATCGAGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357700.11
ENST00000459912.5
ENST00000479033.1
CDS-3UTR CAA 90 bp GCAGAGCCCTCACCCGGGCAATGCTGGGCACAACGGGGGCAGCCACGGTCCGGAACAAAGGGCATCGCCTaGGGCAGCTCAGGCTCACTC +
Preference number: 5 (lower is better)
Translates to: AEPSPGQCWAQRGQPRSGTKGIA*GSSGSL
Trigger: GAGTGAGCCTGAGCTGCCCAAGGCGATGCCCTTTGT...TCCGGACCGTGGCTGCCCCCGTTGTGCCCAGCATTGCCCGGGTGAGGGCTCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS GCA 90 bp ATCAGCTGTTGCAGCTGCAGGCTCTCACCCCGCTGGGCTGCCTCGTaGACAGGGGTCCGCTCCACCCAGAAACCCACGTCGCCCAGGAAG +
Preference number: 5 (lower is better)
Translates to: ISCCSCRLSPRWAAS*TGVRSTQKPTSPRK
Trigger: CTTCCTGGGCGACGTGGGTTTCTGGGTGGAGCGGACCCCTGTGCACGAGGCAGCCCAGCGGGGTGAGAGCCTGCAGCTGCAACAGCTGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357700.11
ENST00000459912.5
ENST00000479033.1
CDS-3UTR CAA 90 bp AACGGGGGCAGCCACGGTCCGGACCCCACCTGCAATTCAGTTGTAGGAGAGGTACAGATGCGCGCAGGCTaGGGGCTGGGGGATGCCTTG +
Preference number: 5 (lower is better)
Translates to: NGGSHGPDPTCNSVVGEVQMRAG*GLGDAL
Trigger: CAAGGCATCCCCCAGCCCCAAGCCTGCGCGCATCTG...TACCTCTCCTACAACTGAATTGCAGGTGGGGTCCGGACCGTGGCTGCCCCCGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000459912.5
CDS GCA 90 bp TGCCCGAGGCGCAGGCATCGCAGAGCGGGGTGCTGCCGTCGATGTTaGGAGCATCCACCTCACGGGAGGAAGAAACAAGTGTCAAAGGGC +
Preference number: 5 (lower is better)
Translates to: CPRRRHRRAGCCRRC*EHPPHGRKKQVSKG
Trigger: GCCCTTTGACACTTGTTTCTTCCTCCCGTGAGGTGGATGCTCGCAACATCGACGGCAGCACCCCGCTCTGCGATGCCTGCGCCTCGGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482921.1
CDS GCA 90 bp CACACTCGATGCTGCCCGAGGCGCAGGCATCGCAGAGCGGGGTGCTaGCGTCGATGTTGCGAGCATCCACCTCACGGGAGGAAGAAACAA +
Preference number: 5 (lower is better)
Translates to: HTRCCPRRRHRRAGC*RRCCEHPPHGRKKQ
Trigger: TTGTTTCTTCCTCCCGTGAGGTGGATGCTCGCAACATCGACGGCAGCACCCCGCTCTGCGATGCCTGCGCCTCGGGCAGCATCGAGTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482921.1
CDS GCA 90 bp TCACACACTCGATGCTGCCCGAGGCGCAGGCATCGCAGAGCGGGGTaGTGCCGTCGATGTTGCGAGCATCCACCTCACGGGAGGAAGAAA +
Preference number: 5 (lower is better)
Translates to: SHTRCCPRRRHRRAG*CRRCCEHPPHGRKK
Trigger: TTTCTTCCTCCCGTGAGGTGGATGCTCGCAACATCGACGGCAGCACCCCGCTCTGCGATGCCTGCGCCTCGGGCAGCATCGAGTGTGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482921.1
CDS-3UTR CAA 90 bp GCAATGCTGGGCACAACGGGGGCAGCCACGGTCCGGACCCCACCTGCAATTCAGTTTGCCGCATTCACGTaGGCCCCCAAAACAGTAGGC +
Preference number: 5 (lower is better)
Translates to: AMLGTTGAATVRTPPAIQFAAFT*APKTVG
Trigger: GCCTACTGTTTTGGGGGCCAACGTGAATGCGGCAAA...CTGAATTGCAGGTGGGGTCCGGACCGTGGCTGCCCCCGTTGTGCCCAGCATTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000459912.5
CDS-3UTR CAA 90 bp CTGCCTTGGCTGCAGAGTCCCATTCCCGTCCAACTCAAAGCACTGGGACAATGCGTGCTGCCGTCGATGTaGCGAGCATCCACCTGGGCC +
Preference number: 5 (lower is better)
Translates to: LPWLQSPIPVQLKALGQCVLPSM*RASTWA
Trigger: GGCCCAGGTGGATGCTCGCAACATCGACGGCAGCAC...GCATTGTCCCAGTGCTTTGAGTTGGACGGGAATGGGACTCTGCAGCCAAGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR CAA 90 bp CACGCTGCTTCAGAGGAACAGGCAGAGCCCTCACCCGGGCAATGCTGGGCACAATCGTGCGCTTCCAGATaGGCCCCGACGTCAATAAGA +
Preference number: 5 (lower is better)
Translates to: HAASEEQAEPSPGQCWAQSCASR*APTSIR
Trigger: TCTTATTGACGTCGGGGCCAATCTGGAAGCGCACGA...TTGTGCCCAGCATTGCCCGGGTGAGGGCTCTGCCTGTTCCTCTGAAGCAGCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR CAA 90 bp AACGGGGGCAGCCACGGTCCGGACCCCACCTGCAATTCAGTTGTAGGAGAGGTAAGGAAAACTGGATGGTaGGGCCCATGCCCATTGAGA +
Preference number: 5 (lower is better)
Translates to: NGGSHGPDPTCNSVVGEVRKTGW*GPCPLR
Trigger: TCTCAATGGGCATGGGCCCAACCATCCAGTTTTCCT...TACCTCTCCTACAACTGAATTGCAGGTGGGGTCCGGACCGTGGCTGCCCCCGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000459912.5
CDS-3UTR CAA 90 bp GCAATGCTGGGCACAACGGGGGCAGCCACGGTCCGGACCCCACCTGCAATTCAGCACACTGCTGTCGGTTaGAATGGCTCATTACCAAAA +
Preference number: 5 (lower is better)
Translates to: AMLGTTGAATVRTPPAIQHTAVG*NGSLPK
Trigger: TTTTGGTAATGAGCCATTCAAACCGACAGCAGTGTG...CTGAATTGCAGGTGGGGTCCGGACCGTGGCTGCCCCCGTTGTGCCCAGCATTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000459912.5
CDS-3UTR CAA 90 bp AGGATCCAGGAGAGAAGCCTAAACAGGATCGCAGGAAGGGACTCGAAGGAGCGTTTTGCCGCATTCACGTaGGCCCCTGCATTGAGCAGC +
Preference number: 5 (lower is better)
Translates to: RIQERSLNRIAGRDSKERFAAFT*APALSS
Trigger: GCTGCTCAATGCAGGGGCCAACGTGAATGCGGCAAA...ACGCTCCTTCGAGTCCCTTCCTGCGATCCTGTTTAGGCTTCTCTCCTGGATCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357700.11
CDS-3UTR CAA 90 bp CCCACCCCCAAGTACCCACGCGGAGAGGCCTCCAGTCATACAGCACAAAGGGCACACACTGCTGTCGGTTaGAATGGCTCATTACCAAAA +
Preference number: 5 (lower is better)
Translates to: PTPKYPRGEASSHTAQRAHTAVG*NGSLPK
Trigger: TTTTGGTAATGAGCCATTCAAACCGACAGCAGTGTG...TGCCCTTTGTGCTGTATGACTGGAGGCCTCTCCGCGTGGGTACTTGGGGGTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR CAA 90 bp AAGTCCCTGAGTGACAGATGCGCGCAGGCTTGGGGCTGGGGGATGCCTTGGAAACAGTTTAACTCCCTGTaGTGGGCGGGGTTCTTAAAA +
Preference number: 5 (lower is better)
Translates to: KSLSDRCAQAWGWGMPWKQFNSL*WAGFLK
Trigger: TTTTAAGAACCCCGCCCACAACAGGGAGTTAAACTG...TTTCCAAGGCATCCCCCAGCCCCAAGCCTGCGCGCATCTGTCACTCAGGGACTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR CAA 90 bp ACCCACAACTGTGACCTGAGACGCAGGCCTTCCCAACACCCTGGAAACATTATCCAGTCTCATGAAGCTTaGCCGCATTCACGTTGGCCC +
Preference number: 5 (lower is better)
Translates to: THNCDLRRRPSQHPGNIIQSHEA*PHSRWP
Trigger: GGGCCAACGTGAATGCGGCAAAGCTTCATGAGACTG...GATAATGTTTCCAGGGTGTTGGGAAGGCCTGCGTCTCAGGTCACAGTTGTGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR CAA 90 bp CAAGTACCCACGCGGAGAGGCCTCCAGTCATACAGCACAAAGGGCATCGCCTTGGTGAGACATCACAGGTaGTCATTGCTAGAGGCAAGA +
Preference number: 5 (lower is better)
Translates to: QVPTRRGLQSYSTKGIALVRHHR*SLLEAR
Trigger: TCTTGCCTCTAGCAATGACAACCTGTGATGTCTCAC...CAAGGCGATGCCCTTTGTGCTGTATGACTGGAGGCCTCTCCGCGTGGGTACTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS TCA 90 bp CAGGACAGGCGTGACCTGCAATTCAGTTGTAGGAGAGGTAATCAATaGGCCGGGGCGGGATGTTTAACTTGGCAATCTTCTCCAGCCCTC +
Preference number: 5 (lower is better)
Translates to: QDRRDLQFSCRRGNQ*AGAGCLTWQSSPAL
Trigger: GAGGGCTGGAGAAGATTGCCAAGTTAAACATCCCGCCCCGGCTCATTGATTACCTCTCCTACAACTGAATTGCAGGTCACGCCTGTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493897.1
CDS CCA 90 bp CTTTGCTATTATGTGCTAGGCAACGACACTGAAAGAGATAGCACGTaGCTGCGGAGCACCGACGGCCTCCTGAGTAGAGAAGTCATCTCG +
Preference number: 5 (lower is better)
Translates to: LCYYVLGNDTERDST*LRSTDGLLSREVIS
Trigger: CGAGATGACTTCTCTACTCAGGAGGCCGTCGGTGCTCCGCAGCCACGTGCTATCTCTTTCAGTGTCGTTGCCTAGCACATAATAGCAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482921.1
CDS-3UTR CAA 90 bp TCCAGGACAGGCGTGACCTGTTCTCCAGAATGGGTAGAGATGGGGTTTCATCAAACGTTGGCCCCTGCATaGAGCAGCACTTTGACACAG +
Preference number: 5 (lower is better)
Translates to: SRTGVTCSPEWVEMGFHQTLAPA*SSTLTQ
Trigger: CTGTGTCAAAGTGCTGCTCAATGCAGGGGCCAACGT...TTGATGAAACCCCATCTCTACCCATTCTGGAGAACAGGTCACGCCTGTCCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357700.11
CDS-3UTR CAA 90 bp GGAGCGTTGTTCTATCTACAGCAATCACGCTGCTTCAGAGGAACAGGCAGAGCCGGCGGGATGTTTAACTaGGCAATCTTCTCCAGCCCT +
Preference number: 5 (lower is better)
Translates to: GALFYLQQSRCFRGTGRAGGMFN*AIFSSP
Trigger: AGGGCTGGAGAAGATTGCCAAGTTAAACATCCCGCC...GGCTCTGCCTGTTCCTCTGAAGCAGCGTGATTGCTGTAGATAGAACAACGCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR CAA 90 bp CAGTGCTACTTGTGGGGAATACAAAGCCAGGGCCTTCCCCCACAAAGACCCATAAGGAAAACTGGATGGTaGGGCCCATGCCCATTGAGA +
Preference number: 5 (lower is better)
Translates to: QCYLWGIQSQGLPPQRPIRKTGW*GPCPLR
Trigger: TCTCAATGGGCATGGGCCCAACCATCCAGTTTTCCT...TATGGGTCTTTGTGGGGGAAGGCCCTGGCTTTGTATTCCCCACAAGTAGCACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR CAA 90 bp TGCTGTCGGTTTGAATGGCTCATTACCAAAACCTTAGTGGTACCGCCTACGTGTACAAAGGGCATCGCCTaGGGCAGCTCAGGCTCACTC +
Preference number: 5 (lower is better)
Translates to: CCRFEWLITKTLVVPPTCTKGIA*GSSGSL
Trigger: GAGTGAGCCTGAGCTGCCCAAGGCGATGCCCTTTGT...ACACGTAGGCGGTACCACTAAGGTTTTGGTAATGAGCCATTCAAACCGACAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR CAA 90 bp CAGTGCTACTTGTGGGGAATACAAAGCCAGGGCCTTCCCCCACAAAGACCCATAATTCCGCCACTTTTATaGAGCAACAGCCGTGGGGAC +
Preference number: 5 (lower is better)
Translates to: QCYLWGIQSQGLPPQRPIIPPLL*SNSRGD
Trigger: GTCCCCACGGCTGTTGCTCAATAAAAGTGGCGGAAT...TATGGGTCTTTGTGGGGGAAGGCCCTGGCTTTGTATTCCCCACAAGTAGCACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR CAA 90 bp AGTCTGAATACGCTACCGAATGCTCCACCTATGGCTTATAATGCAGAACGACCTGCTCTCGATCAGCTGTaGCAGCTGCAGGCTCTCACC +
Preference number: 5 (lower is better)
Translates to: SLNTLPNAPPMAYNAERPALDQL*QLQALT
Trigger: GGTGAGAGCCTGCAGCTGCAACAGCTGATCGAGAGC...AGGTCGTTCTGCATTATAAGCCATAGGTGGAGCATTCGGTAGCGTATTCAGACT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR CAA 90 bp CAGTGCTACTTGTGGGGAATACAAAGCCAGGGCCTTCCCCCACAAAGACCCATAGTCCTGAGAGTGCCTTaGAGGATGGTCCGTAAAAGA +
Preference number: 5 (lower is better)
Translates to: QCYLWGIQSQGLPPQRPIVLRVP*RMVRKR
Trigger: TCTTTTACGGACCATCCTCAAAGGCACTCTCAGGAC...TATGGGTCTTTGTGGGGGAAGGCCCTGGCTTTGTATTCCCCACAAGTAGCACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR CAA 90 bp ACAAAGCCAGGGCCTTCCCCCACAAAGACCCATAGAAAGTCCCTGAGTGACAGAGTCCTGAGAGTGCCTTaGAGGATGGTCCGTAAAAGA +
Preference number: 5 (lower is better)
Translates to: TKPGPSPTKTHRKSLSDRVLRVP*RMVRKR
Trigger: TCTTTTACGGACCATCCTCAAAGGCACTCTCAGGAC...TCTGTCACTCAGGGACTTTCTATGGGTCTTTGTGGGGGAAGGCCCTGGCTTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR CAA 90 bp AAACAGGCCTTTGCACTGAGAATGCCGAGCCACGAGAATATACACCTTGACACACAGTCTCATGAAGCTTaGCCGCATTCACGTTGGCCC +
Preference number: 5 (lower is better)
Translates to: KQAFALRMPSHENIHLDTQSHEA*PHSRWP
Trigger: GGGCCAACGTGAATGCGGCAAAGCTTCATGAGACTG...TGTGTCAAGGTGTATATTCTCGTGGCTCGGCATTCTCAGTGCAAAGGCCTGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR CAA 90 bp CACAGAGTCTCCAAACAGGCCTTTGCACTGAGAATGCCGAGCCACGAGAATATAATTCCGCCACTTTTATaGAGCAACAGCCGTGGGGAC +
Preference number: 5 (lower is better)
Translates to: HRVSKQAFALRMPSHENIIPPLL*SNSRGD
Trigger: GTCCCCACGGCTGTTGCTCAATAAAAGTGGCGGAAT...TATATTCTCGTGGCTCGGCATTCTCAGTGCAAAGGCCTGTTTGGAGACTCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS GCA 90 bp GTCAAAGGGCAGAGAAATGCCACGCAACCCACTTTCCCATCCTGCTaGAGGTTCATCTTTGCTAAGATGCTTCTTAGAAGCACCGGTTTG +
Preference number: 5 (lower is better)
Translates to: VKGQRNATQPTFPSC*RFIFAKMLLRSTGL
Trigger: CAAACCGGTGCTTCTAAGAAGCATCTTAGCAAAGATGAACCTGCAGCAGGATGGGAAAGTGGGTTGCGTGGCATTTCTCTGCCCTTTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482921.1
CDS GCA 90 bp AGTGTCAAAGGGCAGAGAAATGCCACGCAACCCACTTTCCCATCCTaGTGCAGGTTCATCTTTGCTAAGATGCTTCTTAGAAGCACCGGT +
Preference number: 5 (lower is better)
Translates to: SVKGQRNATQPTFPS*CRFIFAKMLLRSTG
Trigger: ACCGGTGCTTCTAAGAAGCATCTTAGCAAAGATGAACCTGCAGCAGGATGGGAAAGTGGGTTGCGTGGCATTTCTCTGCCCTTTGACACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482921.1
CDS-3UTR CAA 90 bp TTGCTAGAGGCAAGAATCTCTTACAAAGATGAAAGGGCAGAACCCAGTGCTTTTGCTCTCGATCAGCTGTaGCAGCTGCAGGCTCTCACC +
Preference number: 5 (lower is better)
Translates to: LLEARISYKDERAEPSAFALDQL*QLQALT
Trigger: GGTGAGAGCCTGCAGCTGCAACAGCTGATCGAGAGC...AAAAGCACTGGGTTCTGCCCTTTCATCTTTGTAAGAGATTCTTGCCTCTAGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR CAA 90 bp TGCTGTCGGTTTGAATGGCTCATTACCAAAACCTTAGTGGTACCGCCTACGTGTGGCGGGATGTTTAACTaGGCAATCTTCTCCAGCCCT +
Preference number: 5 (lower is better)
Translates to: CCRFEWLITKTLVVPPTCGGMFN*AIFSSP
Trigger: AGGGCTGGAGAAGATTGCCAAGTTAAACATCCCGCC...ACACGTAGGCGGTACCACTAAGGTTTTGGTAATGAGCCATTCAAACCGACAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR CAA 90 bp GACAGGCGTGACCTGTTCTCCAGAATGGGTAGAGATGGGGTTTCATCAAGTTGGGAAACTCAGTGCTACTaGTGGGGAATACAAAGCCAG +
Preference number: 5 (lower is better)
Translates to: DRRDLFSRMGRDGVSSSWETQCY*WGIQSQ
Trigger: CTGGCTTTGTATTCCCCACAAGTAGCACTGAGTTTC...CCAACTTGATGAAACCCCATCTCTACCCATTCTGGAGAACAGGTCACGCCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR CAA 90 bp ACCCACAACTGTGACCTGAGACGCAGGCCTTCCCAACACCCTGGAAACATTATCACGAGAATATACACCTaGACACACCTTCACACTGCT +
Preference number: 5 (lower is better)
Translates to: THNCDLRRRPSQHPGNIITRIYT*THLHTA
Trigger: AGCAGTGTGAAGGTGTGTCAAGGTGTATATTCTCGT...GATAATGTTTCCAGGGTGTTGGGAAGGCCTGCGTCTCAGGTCACAGTTGTGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR CAA 90 bp CTGGAAACATTATCCAGGATCCAGGAGAGAAGCCTAAACAGGATCGCAGGAAGGGGACTCGAAGGAGCGTaGTTCTATCTACAGCAATCA +
Preference number: 5 (lower is better)
Translates to: LETLSRIQERSLNRIAGRGLEGA*FYLQQS
Trigger: TGATTGCTGTAGATAGAACAACGCTCCTTCGAGTCC...CCTTCCTGCGATCCTGTTTAGGCTTCTCTCCTGGATCCTGGATAATGTTTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR CAA 90 bp AGGGACTCGAAGGAGCGTTGTTCTATCTACAGCAATCACGCTGCTTCAGAGGAACACTGCAGGACGGGATaGCAAGATTTTCTTATCCTG +
Preference number: 5 (lower is better)
Translates to: RDSKERCSIYSNHAASEEHCRTG*QDFLIL
Trigger: CAGGATAAGAAAATCTTGCAATCCCGTCCTGCAGTG...TTCCTCTGAAGCAGCGTGATTGCTGTAGATAGAACAACGCTCCTTCGAGTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR CAA 90 bp TCCAGGACAGGCGTGACCTGTTCTCCAGAATGGGTAGAGATGGGGTTTCATCAACATCACAGGTTGTCATaGCTAGAGGCAAGAATCTCT +
Preference number: 5 (lower is better)
Translates to: SRTGVTCSPEWVEMGFHQHHRLS*LEARIS
Trigger: AGAGATTCTTGCCTCTAGCAATGACAACCTGTGATG...TTGATGAAACCCCATCTCTACCCATTCTGGAGAACAGGTCACGCCTGTCCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR CAA 90 bp CCCAACACCCTGGAAACATTATCCAGGATCCAGGAGAGAAGCCTAAACAGGATCATTCATCAAGCTGCATaGAGCAGCACTTTGACACAG +
Preference number: 5 (lower is better)
Translates to: PNTLETLSRIQERSLNRIIHQAA*SSTLTQ
Trigger: CTGTGTCAAAGTGCTGCTCAATGCAGCTTGATGAAT...GATCCTGTTTAGGCTTCTCTCCTGGATCCTGGATAATGTTTCCAGGGTGTTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459912.5
CDS-3UTR CAA 90 bp GAACGACCTGTTTCTATCACTGCAGGACGGGATTGCAAGATTTTCTTATCCTGCGGACTCGAAGGAGCGTaGTTCTATCTACAGCAATCA +
Preference number: 5 (lower is better)
Translates to: ERPVSITAGRDCKIFLSCGLEGA*FYLQQS
Trigger: TGATTGCTGTAGATAGAACAACGCTCCTTCGAGTCC...GCAGGATAAGAAAATCTTGCAATCCCGTCCTGCAGTGATAGAAACAGGTCGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR CAA 90 bp ACCTTGACACACCTTCACACTGCTGTCGGTTTGAATGGCTCATTACCAAAACCTGAAACTCAGTGCTACTaGTGGGGAATACAAAGCCAG +
Preference number: 5 (lower is better)
Translates to: TLTHLHTAVGLNGSLPKPETQCY*WGIQSQ
Trigger: CTGGCTTTGTATTCCCCACAAGTAGCACTGAGTTTC...AGGTTTTGGTAATGAGCCATTCAAACCGACAGCAGTGTGAAGGTGTGTCAAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR CAA 90 bp AAACAGGCCTTTGCACTGAGAATGCCGAGCCACGAGAATATACACCTTGACACAACGAGAATATACACCTaGACACACCTTCACACTGCT +
Preference number: 5 (lower is better)
Translates to: KQAFALRMPSHENIHLDTTRIYT*THLHTA
Trigger: AGCAGTGTGAAGGTGTGTCAAGGTGTATATTCTCGT...TGTGTCAAGGTGTATATTCTCGTGGCTCGGCATTCTCAGTGCAAAGGCCTGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR CAA 90 bp AACTCCCTGTTGTGGGCGGGGTTCTTAAAATTTATGAAGGCAAAGACTCCTAGGCACTGCAGGACGGGATaGCAAGATTTTCTTATCCTG +
Preference number: 5 (lower is better)
Translates to: NSLLWAGFLKFMKAKTPRHCRTG*QDFLIL
Trigger: CAGGATAAGAAAATCTTGCAATCCCGTCCTGCAGTG...CCTAGGAGTCTTTGCCTTCATAAATTTTAAGAACCCCGCCCACAACAGGGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR CAA 90 bp AACTCCCTGTTGTGGGCGGGGTTCTTAAAATTTATGAAGGCAAAGACTCCTAGGCAGTTTAACTCCCTGTaGTGGGCGGGGTTCTTAAAA +
Preference number: 5 (lower is better)
Translates to: NSLLWAGFLKFMKAKTPRQFNSL*WAGFLK
Trigger: TTTTAAGAACCCCGCCCACAACAGGGAGTTAAACTG...CCTAGGAGTCTTTGCCTTCATAAATTTTAAGAACCCCGCCCACAACAGGGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR CAA 90 bp CCATGCAGTCTGAATACGCTACCGAATGCTCCACCTATGGCTTATAATGCAGAAGTGAGACATCACAGGTaGTCATTGCTAGAGGCAAGA +
Preference number: 5 (lower is better)
Translates to: PCSLNTLPNAPPMAYNAEVRHHR*SLLEAR
Trigger: TCTTGCCTCTAGCAATGACAACCTGTGATGTCTCAC...TTCTGCATTATAAGCCATAGGTGGAGCATTCGGTAGCGTATTCAGACTGCATGG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS-3UTR CAA 90 bp ACCTTGACACACCTTCACACTGCTGTCGGTTTGAATGGCTCATTACCAAAACCTCATCACAGGTTGTCATaGCTAGAGGCAAGAATCTCT +
Preference number: 5 (lower is better)
Translates to: TLTHLHTAVGLNGSLPKPHHRLS*LEARIS
Trigger: AGAGATTCTTGCCTCTAGCAATGACAACCTGTGATG...AGGTTTTGGTAATGAGCCATTCAAACCGACAGCAGTGTGAAGGTGTGTCAAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS GCA 90 bp AGGTTCATCTTTGCTAAGATGCTTCTTAGAAGCACCGGTTTGCTTTaGTATTATGTGCTAGGCAACGACACTGAAAGAGATAGCACGTGG +
Preference number: 5 (lower is better)
Translates to: RFIFAKMLLRSTGLL*YYVLGNDTERDSTW
Trigger: CCACGTGCTATCTCTTTCAGTGTCGTTGCCTAGCACATAATAGCAAAGCAAACCGGTGCTTCTAAGAAGCATCTTAGCAAAGATGAACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482921.1
CDS GCA 72 bp TGCTGCCCGAGGCGCAGGCATCGCAGAGCGGGGTGCTaGCGTCGATGTTGCGAGCATCCACCTGGGCCCCAG +
Preference number: 6 (lower is better)
Translates to: CCPRRRHRRAGC*RRCCEHPPGPQ
Trigger: CTGGGGCCCAGGTGGATGCTCGCAACATCGACGGCAGCACCCCGCTCTGCGATGCCTGCGCCTCGGGCAGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS GCA 72 bp CGATGCTGCCCGAGGCGCAGGCATCGCAGAGCGGGGTaGTGCCGTCGATGTTGCGAGCATCCACCTGGGCCC +
Preference number: 6 (lower is better)
Translates to: RCCPRRRHRRAG*CRRCCEHPPGP
Trigger: GGGCCCAGGTGGATGCTCGCAACATCGACGGCAGCACCCCGCTCTGCGATGCCTGCGCCTCGGGCAGCATCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000459912.5
CDS GCA 72 bp TGCAGCTGCAGGCTCTCACCCCGCTGGGCTGCCTCGTaGACAGGGGTCCGCTCCACCCAGAAACCCACGTCG +
Preference number: 6 (lower is better)
Translates to: CSCRLSPRWAAS*TGVRSTQKPTS
Trigger: CGACGTGGGTTTCTGGGTGGAGCGGACCCCTGTGCACGAGGCAGCCCAGCGGGGTGAGAGCCTGCAGCTGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357700.11
ENST00000459912.5
ENST00000479033.1
CDS GCA 72 bp TGCTGCCCGAGGCGCAGGCATCGCAGAGCGGGGTGCTaGCGTCGATGTTGCGAGCATCCACCTCACGGGAGG +
Preference number: 6 (lower is better)
Translates to: CCPRRRHRRAGC*RRCCEHPPHGR
Trigger: CCTCCCGTGAGGTGGATGCTCGCAACATCGACGGCAGCACCCCGCTCTGCGATGCCTGCGCCTCGGGCAGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482921.1
CDS GCA 72 bp CGATGCTGCCCGAGGCGCAGGCATCGCAGAGCGGGGTaGTGCCGTCGATGTTGCGAGCATCCACCTCACGGG +
Preference number: 6 (lower is better)
Translates to: RCCPRRRHRRAG*CRRCCEHPPHG
Trigger: CCCGTGAGGTGGATGCTCGCAACATCGACGGCAGCACCCCGCTCTGCGATGCCTGCGCCTCGGGCAGCATCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482921.1
CDS GCA 72 bp CAGCTGTTGCAGCTGCAGGCTCTCACCCCGCTGGGCTaGCTCGTGCACAGGGGTCCGCTCCACCCAGAAACC +
Preference number: 6 (lower is better)
Translates to: QLLQLQALTPLG*LVHRGPLHPET
Trigger: GGTTTCTGGGTGGAGCGGACCCCTGTGCACGAGGCAGCCCAGCGGGGTGAGAGCCTGCAGCTGCAACAGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357700.11
ENST00000459912.5
ENST00000479033.1
CDS GCA 72 bp CCCCGTAGGACAGCAAGAGCTTCACACACTCGATGCTaGCCGAGGCGCAGGCATCGCAGAGCGGGGTGCTGC +
Preference number: 6 (lower is better)
Translates to: PRRTARASHTRC*PRRRHRRAGCC
Trigger: GCAGCACCCCGCTCTGCGATGCCTGCGCCTCGGGCAGCATCGAGTGTGTGAAGCTCTTGCTGTCCTACGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357700.11
ENST00000459912.5
ENST00000482921.1
CDS GCA 72 bp TGGCCCCGTAGGACAGCAAGAGCTTCACACACTCGATaGTGCCCGAGGCGCAGGCATCGCAGAGCGGGGTGC +
Preference number: 6 (lower is better)
Translates to: WPRRTARASHTR*CPRRRHRRAGC
Trigger: GCACCCCGCTCTGCGATGCCTGCGCCTCGGGCAGCATCGAGTGTGTGAAGCTCTTGCTGTCCTACGGGGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357700.11
ENST00000459912.5
ENST00000482921.1
CDS CAA 90 bp CTGCCCGAGGCGCAGGCATCGCAGAGCGGGGTGCTGCCGTCGATGTaGCGAGCATCCACCTCACGGGAGGAAGAAACAAGTGTCAAAGGG +
Preference number: 6 (lower is better)
Translates to: LPEAQASQSGVLPSM*RASTSREEETSVKG
Trigger: CCCTTTGACACTTGTTTCTTCCTCCCGTGAGGTGGATGCTCGCAACATCGACGGCAGCACCCCGCTCTGCGATGCCTGCGCCTCGGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482921.1
CDS GCA 72 bp CGCAGGCATCGCAGAGCGGGGTGCTGCCGTCGATGTTaGGAGCATCCACCTCACGGGAGGAAGAAACAAGTG +
Preference number: 6 (lower is better)
Translates to: RRHRRAGCCRRC*EHPPHGRKKQV
Trigger: CACTTGTTTCTTCCTCCCGTGAGGTGGATGCTCGCAACATCGACGGCAGCACCCCGCTCTGCGATGCCTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482921.1
CDS CAA 72 bp GCGCAGGCATCGCAGAGCGGGGTGCTGCCGTCGATGTaGCGAGCATCCACCTCACGGGAGGAAGAAACAAGT +
Preference number: 6 (lower is better)
Translates to: AQASQSGVLPSM*RASTSREEETS
Trigger: ACTTGTTTCTTCCTCCCGTGAGGTGGATGCTCGCAACATCGACGGCAGCACCCCGCTCTGCGATGCCTGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482921.1
CDS GCA 72 bp CTTGGCCGCGTGGTGAAGGGCAGTCTCATGAAGCTTTaGCGCATTCACGTTGGCCCCTGCATTGAGCAGCAC +
Preference number: 6 (lower is better)
Translates to: LGRVVKGSLMKL*RIHVGPCIEQH
Trigger: GTGCTGCTCAATGCAGGGGCCAACGTGAATGCGGCAAAGCTTCATGAGACTGCCCTTCACCACGCGGCCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357700.11
ENST00000479033.1
CDS CCA 72 bp TATGTGCTAGGCAACGACACTGAAAGAGATAGCACGTaGCTGCGGAGCACCGACGGCCTCCTGAGTAGAGAA +
Preference number: 6 (lower is better)
Translates to: YVLGNDTERDST*LRSTDGLLSRE
Trigger: TTCTCTACTCAGGAGGCCGTCGGTGCTCCGCAGCCACGTGCTATCTCTTTCAGTGTCGTTGCCTAGCACATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482921.1
CDS GCA 72 bp GGGCAGAGAAATGCCACGCAACCCACTTTCCCATCCTaGTGCAGGTTCATCTTTGCTAAGATGCTTCTTAGA +
Preference number: 6 (lower is better)
Translates to: GQRNATQPTFPS*CRFIFAKMLLR
Trigger: TCTAAGAAGCATCTTAGCAAAGATGAACCTGCAGCAGGATGGGAAAGTGGGTTGCGTGGCATTTCTCTGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482921.1
CDS TCA 72 bp CGTGACCTGCAATTCAGTTGTAGGAGAGGTAATCAATaGGCCGGGGCGGGATGTTTAACTTGGCAATCTTCT +
Preference number: 6 (lower is better)
Translates to: RDLQFSCRRGNQ*AGAGCLTWQSS
Trigger: AGAAGATTGCCAAGTTAAACATCCCGCCCCGGCTCATTGATTACCTCTCCTACAACTGAATTGCAGGTCACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493897.1
CDS GCA 72 bp CAGAGAAATGCCACGCAACCCACTTTCCCATCCTGCTaGAGGTTCATCTTTGCTAAGATGCTTCTTAGAAGC +
Preference number: 6 (lower is better)
Translates to: QRNATQPTFPSC*RFIFAKMLLRS
Trigger: GCTTCTAAGAAGCATCTTAGCAAAGATGAACCTGCAGCAGGATGGGAAAGTGGGTTGCGTGGCATTTCTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482921.1
CDS CAA 90 bp TGCTGCAGGTTCATCTTTGCTAAGATGCTTCTTAGAAGCACCGGTTaGCTTTGCTATTATGTGCTAGGCAACGACACTGAAAGAGATAGC +
Preference number: 6 (lower is better)
Translates to: CCRFIFAKMLLRSTG*LCYYVLGNDTERDS
Trigger: GCTATCTCTTTCAGTGTCGTTGCCTAGCACATAATAGCAAAGCAAACCGGTGCTTCTAAGAAGCATCTTAGCAAAGATGAACCTGCAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482921.1
CDS GCA 72 bp CTTTCCCATCCTGCTGCAGGTTCATCTTTGCTAAGATaGTTCTTAGAAGCACCGGTTTGCTTTGCTATTATG +
Preference number: 6 (lower is better)
Translates to: LSHPAAGSSLLR*FLEAPVCFAIM
Trigger: CATAATAGCAAAGCAAACCGGTGCTTCTAAGAAGCATCTTAGCAAAGATGAACCTGCAGCAGGATGGGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482921.1
CDS CAA 72 bp TTCATCTTTGCTAAGATGCTTCTTAGAAGCACCGGTTaGCTTTGCTATTATGTGCTAGGCAACGACACTGAA +
Preference number: 6 (lower is better)
Translates to: FIFAKMLLRSTG*LCYYVLGNDTE
Trigger: TTCAGTGTCGTTGCCTAGCACATAATAGCAAAGCAAACCGGTGCTTCTAAGAAGCATCTTAGCAAAGATGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482921.1