RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ASB11 (Homo sapiens)

Ensembl gene IDs: ENSG00000165192

Ensembl transcript IDs: ENST00000344384.8, ENST00000380470.7, ENST00000480796.6, ENST00000485437.2

Found 316 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTTAGCAGGTGGATGACCTCCACATTGGACTGCCTCGCTGCAGCATaGAGTGGGGTGTCCAGCCACTGGCCATGGTCGACACTGGCTCCT +
Preference number: 1 (lower is better)
Translates to: VSRWMTSTLDCLAAA*SGVSSHWPWSTLAP
Trigger: AGGAGCCAGTGTCGACCATGGCCAGTGGCTGGACACCCCACTCCATGCTGCAGCGAGGCAGTCCAATGTGGAGGTCATCCACCTGCTAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485437.2
3UTR GCA 90 bp AAAGAGCAGGTGGGCCTTCACGGAGCAAGAGTGCCTGCTCCACGCTaGTTTTTGGAGCCGCCAGATCAAGCGCACTTTTGCCCTGAGCAT +
Preference number: 1 (lower is better)
Translates to: KEQVGLHGARVPAPR*FLEPPDQAHFCPEH
Trigger: ATGCTCAGGGCAAAAGTGCGCTTGATCTGGCGGCTCCAAAAAGCAGCGTGGAGCAGGCACTCTTGCTCCGTGAAGGCCCACCTGCTCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485437.2
3UTR CCA 90 bp AGGTGGGCCTTCACGGAGCAAGAGTGCCTGCTCCACGCTGCTTTTTaGAGCCGCCAGATCAAGCGCACTTTTGCCCTGAGCATTTCTACG +
Preference number: 1 (lower is better)
Translates to: RWAFTEQECLLHAAF*SRQIKRTFALSIST
Trigger: CGTAGAAATGCTCAGGGCAAAAGTGCGCTTGATCTGGCGGCTCCAAAAAGCAGCGTGGAGCAGGCACTCTTGCTCCGTGAAGGCCCACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485437.2
3UTR CCA 90 bp ATAGGAGGAATCGTTCGAGTGGCTCTGGCAGATGTAGCTTGTGGATaGCTTGATGACATGCTCGACCGAGACACTTCCGGACACACAGGC +
Preference number: 1 (lower is better)
Translates to: IGGIVRVALADVACG*LDDMLDRDTSGHTG
Trigger: GCCTGTGTGTCCGGAAGTGTCTCGGTCGAGCATGTCATCAAGCCATCCACAAGCTACATCTGCCAGAGCCACTCGAACGATTCCTCCTAT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485437.2
3UTR GCA 90 bp CTCCTAATTCTAGAAGTTTCTTCACACAGTCTACCCTCTGGTAGGTaGAGGCCACATATAGGGGAGTTCCGAGCTGAGGCACCTCATGGT +
Preference number: 1 (lower is better)
Translates to: LLILEVSSHSLPSGR*RPHIGEFRAEAPHG
Trigger: ACCATGAGGTGCCTCAGCTCGGAACTCCCCTATATGTGGCCTGCACCTACCAGAGGGTAGACTGTGTGAAGAAACTTCTAGAATTAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485437.2
3UTR CCA 90 bp TTGGGTTGCAACATGCCTCAGACAATGCCTGTGGGTTCAGGTTGTTaGGGACACCCAGTGTTCTCAATCCTAGAACTGCTTACTTCAAAT +
Preference number: 1 (lower is better)
Translates to: LGCNMPQTMPVGSGC*GHPVFSILELLTSN
Trigger: ATTTGAAGTAAGCAGTTCTAGGATTGAGAACACTGGGTGTCCCCAACAACCTGAACCCACAGGCATTGTCTGAGGCATGTTGCAACCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
3UTR CCA 90 bp CTGATCTCTTCCAAAGTCTCTCTTATCAACCAGGACCGCAGTAACTaGAAGCCTCAGTTAACTACAATGTTTCTGAAGTCCTTAACTTTA +
Preference number: 1 (lower is better)
Translates to: LISSKVSLINQDRSN*KPQLTTMFLKSLTL
Trigger: TAAAGTTAAGGACTTCAGAAACATTGTAGTTAACTGAGGCTTCCAGTTACTGCGGTCCTGGTTGATAAGAGAGACTTTGGAAGAGATCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
3UTR TCA 90 bp TTACTTCGACTGAGCTCATTTAAAGATACTAGGAGTCTAAGCTGTTaGGCTTCTACATTAGGTACTCTAGGTACAGCAGACAACAATCTG +
Preference number: 1 (lower is better)
Translates to: LLRLSSFKDTRSLSC*ASTLGTLGTADNNL
Trigger: CAGATTGTTGTCTGCTGTACCTAGAGTACCTAATGTAGAAGCTCAACAGCTTAGACTCCTAGTATCTTTAAATGAGCTCAGTCGAAGTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
3UTR-3UTR TCA 90 bp GGTGGGCCTTCACGGAGCAAGAGTGCCTGCTCCACGCTGCTTTTTGGAGCCGCCAGGGGAGTTCCGAGCTaGGGCACCTCATGGTCAATG +
Preference number: 2 (lower is better)
Translates to: GGPSRSKSACSTLLFGAARGVPS*GTSWSM
Trigger: CATTGACCATGAGGTGCCTCAGCTCGGAACTCCCCT...GGCGGCTCCAAAAAGCAGCGTGGAGCAGGCACTCTTGCTCCGTGAAGGCCCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485437.2
3UTR-3UTR GCA 90 bp GGTGGGCCTTCACGGAGCAAGAGTGCCTGCTCCACGCTGCTTTTTGGAGCCGCCACCTCCACATTGGACTaGCTCGCTGCAGCATGGAGT +
Preference number: 2 (lower is better)
Translates to: GGPSRSKSACSTLLFGAATSTLD*LAAAWS
Trigger: ACTCCATGCTGCAGCGAGGCAGTCCAATGTGGAGGT...GGCGGCTCCAAAAAGCAGCGTGGAGCAGGCACTCTTGCTCCGTGAAGGCCCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485437.2
3UTR-3UTR CCA 90 bp GGTGGGCCTTCACGGAGCAAGAGTGCCTGCTCCACGCTGCTTTTTGGAGCCGCCTCCAGCCACTGGCCATaGTCGACACTGGCTCCTAAT +
Preference number: 2 (lower is better)
Translates to: GGPSRSKSACSTLLFGAASSHWP*STLAPN
Trigger: ATTAGGAGCCAGTGTCGACCATGGCCAGTGGCTGGA...GGCGGCTCCAAAAAGCAGCGTGGAGCAGGCACTCTTGCTCCGTGAAGGCCCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485437.2
3UTR-3UTR CCA 90 bp AAAGAGCAGGTGGGCCTTCACGGAGCAAGAGTGCCTGCTCCACGCTGCTTTTTGGGGGTGTCCAGCCACTaGCCATGGTCGACACTGGCT +
Preference number: 2 (lower is better)
Translates to: KEQVGLHGARVPAPRCFLGVSSH*PWSTLA
Trigger: AGCCAGTGTCGACCATGGCCAGTGGCTGGACACCCC...CAAAAAGCAGCGTGGAGCAGGCACTCTTGCTCCGTGAAGGCCCACCTGCTCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000485437.2
3UTR CAA 90 bp CAGGTGGGCCTTCACGGAGCAAGAGTGCCTGCTCCACGCTGCTTTTaGGAGCCGCCAGATCAAGCGCACTTTTGCCCTGAGCATTTCTAC +
Preference number: 2 (lower is better)
Translates to: QVGLHGARVPAPRCF*EPPDQAHFCPEHFY
Trigger: GTAGAAATGCTCAGGGCAAAAGTGCGCTTGATCTGGCGGCTCCAAAAAGCAGCGTGGAGCAGGCACTCTTGCTCCGTGAAGGCCCACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485437.2
3UTR-3UTR GCA 90 bp AAAGAGCAGGTGGGCCTTCACGGAGCAAGAGTGCCTGCTCCACGCTGCTTTTTGATTGGACTGCCTCGCTaGAGCATGGAGTGGGGTGTC +
Preference number: 2 (lower is better)
Translates to: KEQVGLHGARVPAPRCFLIGLPR*SMEWGV
Trigger: GACACCCCACTCCATGCTGCAGCGAGGCAGTCCAAT...CAAAAAGCAGCGTGGAGCAGGCACTCTTGCTCCGTGAAGGCCCACCTGCTCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485437.2
3UTR-3UTR GCA 90 bp GCTGGGAAAGAGCAGGTGGGCCTTCACGGAGCAAGAGTGCCTGCTCCACGCTGCGATCAAGCGCACTTTTaGCCTGAGCATTTCTACGCT +
Preference number: 2 (lower is better)
Translates to: AGKEQVGLHGARVPAPRCDQAHF*PEHFYA
Trigger: AGCGTAGAAATGCTCAGGGCAAAAGTGCGCTTGATC...GCAGCGTGGAGCAGGCACTCTTGCTCCGTGAAGGCCCACCTGCTCTTTCCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485437.2
3UTR-3UTR TCA 90 bp TTGCTGGCTCCTGTGCACTGTAGGGTGATTAGCTGCATCCCTGATCTCCACCGTATATTGACCCAGCATTaGGCCCACTTTGGTGGCTGG +
Preference number: 2 (lower is better)
Translates to: LLAPVHCRVISCIPDLHRILTQH*AHFGGW
Trigger: CCAGCCACCAAAGTGGGCTCAATGCTGGGTCAATAT...ACGGTGGAGATCAGGGATGCAGCTAATCACCCTACAGTGCACAGGAGCCAGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380470.7
ENST00000480796.6
3UTR-3UTR CCA 90 bp TTGCTGGCTCCTGTGCACTGTAGGGTGATTAGCTGCATCCCTGATCTCCACCGTCTCAGACAATGCCTGTaGGTTCAGGTTGTTGGGGAC +
Preference number: 2 (lower is better)
Translates to: LLAPVHCRVISCIPDLHRLRQCL*VQVVGD
Trigger: GTCCCCAACAACCTGAACCCACAGGCATTGTCTGAG...ACGGTGGAGATCAGGGATGCAGCTAATCACCCTACAGTGCACAGGAGCCAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380470.7
ENST00000480796.6
3UTR-3UTR CCA 90 bp ATCAAGCGCACTTTTGCCCTGAGCATTTCTACGCTTCAGGTTAGCTCCATAGTCTGCCTCGCTGCAGCATaGAGTGGGGTGTCCAGCCAC +
Preference number: 2 (lower is better)
Translates to: IKRTFALSISTLQVSSIVCLAAA*SGVSSH
Trigger: GTGGCTGGACACCCCACTCCATGCTGCAGCGAGGCA...GACTATGGAGCTAACCTGAAGCGTAGAAATGCTCAGGGCAAAAGTGCGCTTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485437.2
3UTR-3UTR TCA 90 bp TGCCTCAGACAATGCCTGTGGGTTCAGGTTGTTGGGGACACCCAGTGTTCTCAAAACCTCTGGGTGCACTaGTCTCTTCCAAAGTCTCTC +
Preference number: 2 (lower is better)
Translates to: CLRQCLWVQVVGDTQCSQNLWVH*SLPKSL
Trigger: GAGAGACTTTGGAAGAGATCAGTGCACCCAGAGGTT...TTGAGAACACTGGGTGTCCCCAACAACCTGAACCCACAGGCATTGTCTGAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
3UTR-3UTR CCA 90 bp CCACGCTGCTTTTTGGAGCCGCCAGATCAAGCGCACTTTTGCCCTGAGCATTTCGGCCATGGTCGACACTaGCTCCTAATTCTAGAAGTT +
Preference number: 2 (lower is better)
Translates to: PRCFLEPPDQAHFCPEHFGHGRH*LLILEV
Trigger: AACTTCTAGAATTAGGAGCCAGTGTCGACCATGGCC...GAAATGCTCAGGGCAAAAGTGCGCTTGATCTGGCGGCTCCAAAAAGCAGCGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485437.2
3UTR CAA 90 bp GTGCTTGGGTTGCAACATGCCTCAGACAATGCCTGTGGGTTCAGGTaGTTGGGGACACCCAGTGTTCTCAATCCTAGAACTGCTTACTTC +
Preference number: 2 (lower is better)
Translates to: VLGLQHASDNACGFR*LGTPSVLNPRTAYF
Trigger: GAAGTAAGCAGTTCTAGGATTGAGAACACTGGGTGTCCCCAACAACCTGAACCCACAGGCATTGTCTGAGGCATGTTGCAACCCAAGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
3UTR-3UTR GCA 90 bp CAGTGCTTGGGTTGCAACATGCCTCAGACAATGCCTGTGGGTTCAGGTTGTTGGGCAATAAGCAATAGATaGCAACCTCTGGGTGCACTG +
Preference number: 2 (lower is better)
Translates to: QCLGCNMPQTMPVGSGCWAISNR*QPLGAL
Trigger: CAGTGCACCCAGAGGTTGGCATCTATTGCTTATTGC...CCAACAACCTGAACCCACAGGCATTGTCTGAGGCATGTTGCAACCCAAGCACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
3UTR-3UTR GCA 90 bp TGCCTCAGACAATGCCTGTGGGTTCAGGTTGTTGGGGACACCCAGTGTTCTCAAGCAATAAGCAATAGATaGCAACCTCTGGGTGCACTG +
Preference number: 2 (lower is better)
Translates to: CLRQCLWVQVVGDTQCSQAISNR*QPLGAL
Trigger: CAGTGCACCCAGAGGTTGGCATCTATTGCTTATTGC...TTGAGAACACTGGGTGTCCCCAACAACCTGAACCCACAGGCATTGTCTGAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
3UTR-3UTR CCA 90 bp CAGTGCTTGGGTTGCAACATGCCTCAGACAATGCCTGTGGGTTCAGGTTGTTGGCAGGACCGCAGTAACTaGAAGCCTCAGTTAACTACA +
Preference number: 2 (lower is better)
Translates to: QCLGCNMPQTMPVGSGCWQDRSN*KPQLTT
Trigger: TGTAGTTAACTGAGGCTTCCAGTTACTGCGGTCCTG...CCAACAACCTGAACCCACAGGCATTGTCTGAGGCATGTTGCAACCCAAGCACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
3UTR-3UTR CCA 90 bp GTGATTAGCTGCATCCCTGATCTCCACCGTCTAGATGATAGTAGCAATTCTCCCGTGGGTTCAGGTTGTTaGGGACACCCAGTGTTCTCA +
Preference number: 2 (lower is better)
Translates to: VISCIPDLHRLDDSSNSPVGSGC*GHPVFS
Trigger: TGAGAACACTGGGTGTCCCCAACAACCTGAACCCAC...GGGAGAATTGCTACTATCATCTAGACGGTGGAGATCAGGGATGCAGCTAATCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380470.7
ENST00000480796.6
3UTR CAA 90 bp CTTGGGTTGCAACATGCCTCAGACAATGCCTGTGGGTTCAGGTTGTaGGGGACACCCAGTGTTCTCAATCCTAGAACTGCTTACTTCAAA +
Preference number: 2 (lower is better)
Translates to: LGLQHASDNACGFRL*GTPSVLNPRTAYFK
Trigger: TTTGAAGTAAGCAGTTCTAGGATTGAGAACACTGGGTGTCCCCAACAACCTGAACCCACAGGCATTGTCTGAGGCATGTTGCAACCCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
3UTR-3UTR TCA 90 bp TCTGCAGACATTGACAAATGTCTCAGTGGGAGTGGGGCAAAATTGTCTCCAGTTATATTGACCCAGCATTaGGCCCACTTTGGTGGCTGG +
Preference number: 2 (lower is better)
Translates to: SADIDKCLSGSGAKLSPVILTQH*AHFGGW
Trigger: CCAGCCACCAAAGTGGGCTCAATGCTGGGTCAATAT...AACTGGAGACAATTTTGCCCCACTCCCACTGAGACATTTGTCAATGTCTGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380470.7
ENST00000480796.6
3UTR-3UTR CCA 90 bp GTGATTAGCTGCATCCCTGATCTCCACCGTCTAGATGATAGTAGCAATTCTCCCGCATTGAGCCCACTTTaGTGGCTGGCATCAGTATGT +
Preference number: 2 (lower is better)
Translates to: VISCIPDLHRLDDSSNSPALSPL*WLASVC
Trigger: ACATACTGATGCCAGCCACCAAAGTGGGCTCAATGC...GGGAGAATTGCTACTATCATCTAGACGGTGGAGATCAGGGATGCAGCTAATCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380470.7
ENST00000480796.6
3UTR CAA 90 bp AAAAACCCTGAGCATCTTGACTTTGAAAATAAGCCAGTGCTTGGGTaGCAACATGCCTCAGACAATGCCTGTGGGTTCAGGTTGTTGGGG +
Preference number: 2 (lower is better)
Translates to: KNPEHLDFENKPVLG*QHASDNACGFRLLG
Trigger: CCCCAACAACCTGAACCCACAGGCATTGTCTGAGGCATGTTGCAACCCAAGCACTGGCTTATTTTCAAAGTCAAGATGCTCAGGGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
3UTR-3UTR TCA 90 bp GTGATTAGCTGCATCCCTGATCTCCACCGTCTAGATGATAGTAGCAATTCTCCCAGGAGTCTAAGCTGTTaGGCTTCTACATTAGGTACT +
Preference number: 2 (lower is better)
Translates to: VISCIPDLHRLDDSSNSPRSLSC*ASTLGT
Trigger: AGTACCTAATGTAGAAGCTCAACAGCTTAGACTCCT...GGGAGAATTGCTACTATCATCTAGACGGTGGAGATCAGGGATGCAGCTAATCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380470.7
ENST00000480796.6
3UTR-3UTR TCA 90 bp GACAATGCCTGTGGGTTCAGGTTGTTGGGGACACCCAGTGTTCTCAATCCTAGAGGGATTTACTTCGACTaGGCTCATTTAAAGATACTA +
Preference number: 2 (lower is better)
Translates to: DNACGFRLLGTPSVLNPRGIYFD*AHLKIL
Trigger: TAGTATCTTTAAATGAGCTCAGTCGAAGTAAATCCC...TCTAGGATTGAGAACACTGGGTGTCCCCAACAACCTGAACCCACAGGCATTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
3UTR CAA 90 bp ATTTCAAAAACCCTGAGCATCTTGACTTTGAAAATAAGCCAGTGCTaGGGTTGCAACATGCCTCAGACAATGCCTGTGGGTTCAGGTTGT +
Preference number: 2 (lower is better)
Translates to: ISKTLSILTLKISQC*GCNMPQTMPVGSGC
Trigger: ACAACCTGAACCCACAGGCATTGTCTGAGGCATGTTGCAACCCAAGCACTGGCTTATTTTCAAAGTCAAGATGCTCAGGGTTTTTGAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
3UTR-3UTR CCA 90 bp TCTGCAGACATTGACAAATGTCTCAGTGGGAGTGGGGCAAAATTGTCTCCAGTTCCTTTGTGCTTATTTTaGGCCCCTATCCACAGAAAA +
Preference number: 2 (lower is better)
Translates to: SADIDKCLSGSGAKLSPVPLCLF*APIHRK
Trigger: TTTTCTGTGGATAGGGGCCCAAAATAAGCACAAAGG...AACTGGAGACAATTTTGCCCCACTCCCACTGAGACATTTGTCAATGTCTGCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000380470.7
ENST00000480796.6
3UTR-3UTR CCA 90 bp GGCTGGCATCAGTATGTAATTATTTCAAAAACCCTGAGCATCTTGACTTTGAAAGTGGGTTCAGGTTGTTaGGGACACCCAGTGTTCTCA +
Preference number: 2 (lower is better)
Translates to: GWHQYVIISKTLSILTLKVGSGC*GHPVFS
Trigger: TGAGAACACTGGGTGTCCCCAACAACCTGAACCCAC...TTTCAAAGTCAAGATGCTCAGGGTTTTTGAAATAATTACATACTGATGCCAGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
3UTR-3UTR TCA 90 bp TCTGCAGACATTGACAAATGTCTCAGTGGGAGTGGGGCAAAATTGTCTCCAGTTGGGATTTACTTCGACTaGGCTCATTTAAAGATACTA +
Preference number: 2 (lower is better)
Translates to: SADIDKCLSGSGAKLSPVGIYFD*AHLKIL
Trigger: TAGTATCTTTAAATGAGCTCAGTCGAAGTAAATCCC...AACTGGAGACAATTTTGCCCCACTCCCACTGAGACATTTGTCAATGTCTGCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380470.7
ENST00000480796.6
3UTR-3UTR GCA 90 bp GGCTGGCATCAGTATGTAATTATTTCAAAAACCCTGAGCATCTTGACTTTGAAAACATGCCTCAGACAATaGCTGTGGGTTCAGGTTGTT +
Preference number: 2 (lower is better)
Translates to: GWHQYVIISKTLSILTLKTCLRQ*LWVQVV
Trigger: AACAACCTGAACCCACAGGCATTGTCTGAGGCATGT...TTTCAAAGTCAAGATGCTCAGGGTTTTTGAAATAATTACATACTGATGCCAGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
3UTR-3UTR CCA 90 bp GGCTGGCATCAGTATGTAATTATTTCAAAAACCCTGAGCATCTTGACTTTGAAACAGGACCGCAGTAACTaGAAGCCTCAGTTAACTACA +
Preference number: 2 (lower is better)
Translates to: GWHQYVIISKTLSILTLKQDRSN*KPQLTT
Trigger: TGTAGTTAACTGAGGCTTCCAGTTACTGCGGTCCTG...TTTCAAAGTCAAGATGCTCAGGGTTTTTGAAATAATTACATACTGATGCCAGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
3UTR CAA 90 bp TGGCATCAGTATGTAATTATTTCAAAAACCCTGAGCATCTTGACTTaGAAAATAAGCCAGTGCTTGGGTTGCAACATGCCTCAGACAATG +
Preference number: 2 (lower is better)
Translates to: WHQYVIISKTLSILT*KISQCLGCNMPQTM
Trigger: CATTGTCTGAGGCATGTTGCAACCCAAGCACTGGCTTATTTTCAAAGTCAAGATGCTCAGGGTTTTTGAAATAATTACATACTGATGCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
3UTR-3UTR TCA 90 bp GGCTGGCATCAGTATGTAATTATTTCAAAAACCCTGAGCATCTTGACTTTGAAAAGGAGTCTAAGCTGTTaGGCTTCTACATTAGGTACT +
Preference number: 2 (lower is better)
Translates to: GWHQYVIISKTLSILTLKRSLSC*ASTLGT
Trigger: AGTACCTAATGTAGAAGCTCAACAGCTTAGACTCCT...TTTCAAAGTCAAGATGCTCAGGGTTTTTGAAATAATTACATACTGATGCCAGCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
3UTR GCA 72 bp GTGGGCCTTCACGGAGCAAGAGTGCCTGCTCCACGCTaGTTTTTGGAGCCGCCAGATCAAGCGCACTTTTGC +
Preference number: 3 (lower is better)
Translates to: VGLHGARVPAPR*FLEPPDQAHFC
Trigger: GCAAAAGTGCGCTTGATCTGGCGGCTCCAAAAAGCAGCGTGGAGCAGGCACTCTTGCTCCGTGAAGGCCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485437.2
3UTR GCA 72 bp GAAAGAGCAGGTGGGCCTTCACGGAGCAAGAGTGCCTaGTCCACGCTGCTTTTTGGAGCCGCCAGATCAAGC +
Preference number: 3 (lower is better)
Translates to: ERAGGPSRSKSA*STLLFGAARSS
Trigger: GCTTGATCTGGCGGCTCCAAAAAGCAGCGTGGAGCAGGCACTCTTGCTCCGTGAAGGCCCACCTGCTCTTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485437.2
3UTR-3UTR CAA 90 bp AAAGAGCAGGTGGGCCTTCACGGAGCAAGAGTGCCTGCTCCACGCTGCTTTTTGTGGATGACCTCCACATaGGACTGCCTCGCTGCAGCA +
Preference number: 3 (lower is better)
Translates to: KEQVGLHGARVPAPRCFLWMTST*DCLAAA
Trigger: TGCTGCAGCGAGGCAGTCCAATGTGGAGGTCATCCA...CAAAAAGCAGCGTGGAGCAGGCACTCTTGCTCCGTGAAGGCCCACCTGCTCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485437.2
3UTR CCA 72 bp TTCACGGAGCAAGAGTGCCTGCTCCACGCTGCTTTTTaGAGCCGCCAGATCAAGCGCACTTTTGCCCTGAGC +
Preference number: 3 (lower is better)
Translates to: FTEQECLLHAAF*SRQIKRTFALS
Trigger: GCTCAGGGCAAAAGTGCGCTTGATCTGGCGGCTCCAAAAAGCAGCGTGGAGCAGGCACTCTTGCTCCGTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485437.2
3UTR CCA 72 bp ATCGTTCGAGTGGCTCTGGCAGATGTAGCTTGTGGATaGCTTGATGACATGCTCGACCGAGACACTTCCGGA +
Preference number: 3 (lower is better)
Translates to: IVRVALADVACG*LDDMLDRDTSG
Trigger: TCCGGAAGTGTCTCGGTCGAGCATGTCATCAAGCCATCCACAAGCTACATCTGCCAGAGCCACTCGAACGAT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485437.2
3UTR-3UTR CAA 90 bp GTGATTAGCTGCATCCCTGATCTCCACCGTCTAGATGATAGTAGCAATTCTCCCTGTGGGTTCAGGTTGTaGGGGACACCCAGTGTTCTC +
Preference number: 3 (lower is better)
Translates to: VISCIPDLHRLDDSSNSPCGFRL*GTPSVL
Trigger: GAGAACACTGGGTGTCCCCAACAACCTGAACCCACA...GGGAGAATTGCTACTATCATCTAGACGGTGGAGATCAGGGATGCAGCTAATCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380470.7
ENST00000480796.6
3UTR-3UTR CAA 90 bp TTGCTGGCTCCTGTGCACTGTAGGGTGATTAGCTGCATCCCTGATCTCCACCGTCTGAGCATCTTGACTTaGAAAATAAGCCAGTGCTTG +
Preference number: 3 (lower is better)
Translates to: LLAPVHCRVISCIPDLHRLSILT*KISQCL
Trigger: CAAGCACTGGCTTATTTTCAAAGTCAAGATGCTCAG...ACGGTGGAGATCAGGGATGCAGCTAATCACCCTACAGTGCACAGGAGCCAGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380470.7
ENST00000480796.6
3UTR CCA 72 bp AACATGCCTCAGACAATGCCTGTGGGTTCAGGTTGTTaGGGACACCCAGTGTTCTCAATCCTAGAACTGCTT +
Preference number: 3 (lower is better)
Translates to: NMPQTMPVGSGC*GHPVFSILELL
Trigger: AAGCAGTTCTAGGATTGAGAACACTGGGTGTCCCCAACAACCTGAACCCACAGGCATTGTCTGAGGCATGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
3UTR-3UTR CAA 90 bp GTGATTAGCTGCATCCCTGATCTCCACCGTCTAGATGATAGTAGCAATTCTCCCAAGCCAGTGCTTGGGTaGCAACATGCCTCAGACAAT +
Preference number: 3 (lower is better)
Translates to: VISCIPDLHRLDDSSNSPKPVLG*QHASDN
Trigger: ATTGTCTGAGGCATGTTGCAACCCAAGCACTGGCTT...GGGAGAATTGCTACTATCATCTAGACGGTGGAGATCAGGGATGCAGCTAATCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380470.7
ENST00000480796.6
3UTR-3UTR CAA 90 bp GTGATTAGCTGCATCCCTGATCTCCACCGTCTAGATGATAGTAGCAATTCTCCCAATATTGACCCAGCATaGAGCCCACTTTGGTGGCTG +
Preference number: 3 (lower is better)
Translates to: VISCIPDLHRLDDSSNSPNIDPA*SPLWWL
Trigger: CAGCCACCAAAGTGGGCTCAATGCTGGGTCAATATT...GGGAGAATTGCTACTATCATCTAGACGGTGGAGATCAGGGATGCAGCTAATCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380470.7
ENST00000480796.6
3UTR-3UTR CAA 90 bp GTGATTAGCTGCATCCCTGATCTCCACCGTCTAGATGATAGTAGCAATTCTCCCAAAATAAGCCAGTGCTaGGGTTGCAACATGCCTCAG +
Preference number: 3 (lower is better)
Translates to: VISCIPDLHRLDDSSNSPKISQC*GCNMPQ
Trigger: CTGAGGCATGTTGCAACCCAAGCACTGGCTTATTTT...GGGAGAATTGCTACTATCATCTAGACGGTGGAGATCAGGGATGCAGCTAATCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380470.7
ENST00000480796.6
3UTR-3UTR CAA 90 bp CAGTGCTTGGGTTGCAACATGCCTCAGACAATGCCTGTGGGTTCAGGTTGTTGGGTTTCTACTTGCCCCTaGGTTAATGAGAACATTAAA +
Preference number: 3 (lower is better)
Translates to: QCLGCNMPQTMPVGSGCWVSTCP*VNENIK
Trigger: TTTAATGTTCTCATTAACCAAGGGGCAAGTAGAAAC...CCAACAACCTGAACCCACAGGCATTGTCTGAGGCATGTTGCAACCCAAGCACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
3UTR CCA 72 bp TCCAAAGTCTCTCTTATCAACCAGGACCGCAGTAACTaGAAGCCTCAGTTAACTACAATGTTTCTGAAGTCC +
Preference number: 3 (lower is better)
Translates to: SKVSLINQDRSN*KPQLTTMFLKS
Trigger: GGACTTCAGAAACATTGTAGTTAACTGAGGCTTCCAGTTACTGCGGTCCTGGTTGATAAGAGAGACTTTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
3UTR-3UTR CAA 90 bp GGCTGGCATCAGTATGTAATTATTTCAAAAACCCTGAGCATCTTGACTTTGAAAAAGCCAGTGCTTGGGTaGCAACATGCCTCAGACAAT +
Preference number: 3 (lower is better)
Translates to: GWHQYVIISKTLSILTLKKPVLG*QHASDN
Trigger: ATTGTCTGAGGCATGTTGCAACCCAAGCACTGGCTT...TTTCAAAGTCAAGATGCTCAGGGTTTTTGAAATAATTACATACTGATGCCAGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
3UTR TCA 72 bp CTGAGCTCATTTAAAGATACTAGGAGTCTAAGCTGTTaGGCTTCTACATTAGGTACTCTAGGTACAGCAGAC +
Preference number: 3 (lower is better)
Translates to: LSSFKDTRSLSC*ASTLGTLGTAD
Trigger: GTCTGCTGTACCTAGAGTACCTAATGTAGAAGCTCAACAGCTTAGACTCCTAGTATCTTTAAATGAGCTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
3UTR-3UTR CAA 90 bp GGCTGGCATCAGTATGTAATTATTTCAAAAACCCTGAGCATCTTGACTTTGAAAGTTTCTACTTGCCCCTaGGTTAATGAGAACATTAAA +
Preference number: 3 (lower is better)
Translates to: GWHQYVIISKTLSILTLKVSTCP*VNENIK
Trigger: TTTAATGTTCTCATTAACCAAGGGGCAAGTAGAAAC...TTTCAAAGTCAAGATGCTCAGGGTTTTTGAAATAATTACATACTGATGCCAGCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR CCA 90 bp GCTGGGAAAGAGCAGGTGGGCCTTCACGGAGCAAGAGTGCCTGCTCCACGCTGCGGGGTGTCCAGCCACTaGCCATGGTCGACACTGGCT +
Preference number: 4 (lower is better)
Translates to: AGKEQVGLHGARVPAPRCGVSSH*PWSTLA
Trigger: AGCCAGTGTCGACCATGGCCAGTGGCTGGACACCCC...GCAGCGTGGAGCAGGCACTCTTGCTCCGTGAAGGCCCACCTGCTCTTTCCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485437.2
CDS-3UTR CCA 90 bp GGTGGGCCTTCACGGAGCAAGAGTGCCTGCTCCACGCTGCTTTTTGGAGCCGCCCTCTTCACTGCCTCATaGATGGGCGAGGCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: GGPSRSKSACSTLLFGAALFTAS*MGEARC
Trigger: GCACCTGGCCTCGCCCATCCATGAGGCAGTGAAGAG...GGCGGCTCCAAAAAGCAGCGTGGAGCAGGCACTCTTGCTCCGTGAAGGCCCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485437.2
CDS-3UTR CCA 90 bp TGGGCCTTCACGGAGCAAGAGTGCCTGCTCCACGCTGCTTTTTGGAGCCGCCAGAGGTGCACCTCCAACTaGGCCTTGGCTCCGAACTCC +
Preference number: 4 (lower is better)
Translates to: WAFTEQECLLHAAFWSRQRCTSN*ALAPNS
Trigger: GGAGTTCGGAGCCAAGGCCCAGTTGGAGGTGCACCT...CTGGCGGCTCCAAAAAGCAGCGTGGAGCAGGCACTCTTGCTCCGTGAAGGCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485437.2
CDS-3UTR GCA 90 bp AAAGAGCAGGTGGGCCTTCACGGAGCAAGAGTGCCTGCTCCACGCTGCTTTTTGATGGGCGAGGCCAGGTaGACCTCCAACTGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: KEQVGLHGARVPAPRCFLMGEAR*TSNWAL
Trigger: CAAGGCCCAGTTGGAGGTGCACCTGGCCTCGCCCAT...CAAAAAGCAGCGTGGAGCAGGCACTCTTGCTCCGTGAAGGCCCACCTGCTCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485437.2
CDS-3UTR CCA 90 bp GTGGATGGCTTGATGACATGCTCGACCGAGACACTTCCGGACACACAGGCGGCATCACTGCCTCATGGATaGGCGAGGCCAGGTGCACCT +
Preference number: 4 (lower is better)
Translates to: VDGLMTCSTETLPDTQAASLPHG*ARPGAP
Trigger: AGGTGCACCTGGCCTCGCCCATCCATGAGGCAGTGA...TGCCGCCTGTGTGTCCGGAAGTGTCTCGGTCGAGCATGTCATCAAGCCATCCAC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485437.2
CDS-3UTR CCA 90 bp AAAGAGCAGGTGGGCCTTCACGGAGCAAGAGTGCCTGCTCCACGCTGCTTTTTGTGCCTCGCTGCAGCATaGAGTGGGGTGTCCAGCCAC +
Preference number: 4 (lower is better)
Translates to: KEQVGLHGARVPAPRCFLCLAAA*SGVSSH
Trigger: GTGGCTGGACACCCCACTCCATGCTGCAGCGAGGCA...CAAAAAGCAGCGTGGAGCAGGCACTCTTGCTCCGTGAAGGCCCACCTGCTCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485437.2
CDS-3UTR TCA 90 bp TGGCTTGATGACATGCTCGACCGAGACACTTCCGGACACACAGGCGGCAGAGCTACTCCAGCAGCACATTaGCACATGCAGCACTGCCGC +
Preference number: 4 (lower is better)
Translates to: WLDDMLDRDTSGHTGGRATPAAH*HMQHCR
Trigger: GCGGCAGTGCTGCATGTGTCAATGTGCTGCTGGAGT...AGCTCTGCCGCCTGTGTGTCCGGAAGTGTCTCGGTCGAGCATGTCATCAAGCCA
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485437.2
CDS-3UTR TCA 90 bp GGTGGGCCTTCACGGAGCAAGAGTGCCTGCTCCACGCTGCTTTTTGGAGCCGCCAGCCAGAGGTTGCAATaGGCAGAAATCATGCCACTG +
Preference number: 4 (lower is better)
Translates to: GGPSRSKSACSTLLFGAASQRLQ*AEIMPL
Trigger: CAGTGGCATGATTTCTGCTCATTGCAACCTCTGGCT...GGCGGCTCCAAAAAGCAGCGTGGAGCAGGCACTCTTGCTCCGTGAAGGCCCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485437.2
CDS-3UTR CCA 90 bp GAAAGAGCAGGTGGGCCTTCACGGAGCAAGAGTGCCTGCTCCACGCTGCTTTTTCCTCCAACTGGGCCTTaGCTCCGAACTCCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: ERAGGPSRSKSACSTLLFPPTGP*LRTPAA
Trigger: TGCTGCTGGAGTTCGGAGCCAAGGCCCAGTTGGAGG...AAAAAGCAGCGTGGAGCAGGCACTCTTGCTCCGTGAAGGCCCACCTGCTCTTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485437.2
CDS-3UTR CCA 90 bp GTGGATGGCTTGATGACATGCTCGACCGAGACACTTCCGGACACACAGGCGGCACTCCACGCTGCTTTTTaGAGCCGCCAGATCAAGCGC +
Preference number: 4 (lower is better)
Translates to: VDGLMTCSTETLPDTQAALHAAF*SRQIKR
Trigger: GCGCTTGATCTGGCGGCTCCAAAAAGCAGCGTGGAG...TGCCGCCTGTGTGTCCGGAAGTGTCTCGGTCGAGCATGTCATCAAGCCATCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485437.2
CDS-3UTR CCA 90 bp CTGCTCCACGCTGCTTTTTGGAGCCGCCAGATCAAGCGCACTTTTGCCCTGAGCCTGGGAAAGAGCAGGTaGGCCTTCACGGAGCAAGAG +
Preference number: 4 (lower is better)
Translates to: LLHAAFWSRQIKRTFALSLGKSR*AFTEQE
Trigger: CTCTTGCTCCGTGAAGGCCCACCTGCTCTTTCCCAG...GCTCAGGGCAAAAGTGCGCTTGATCTGGCGGCTCCAAAAAGCAGCGTGGAGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485437.2
CDS-3UTR TCA 90 bp CCACGCTGCTTTTTGGAGCCGCCAGATCAAGCGCACTTTTGCCCTGAGCATTTCCGCTGCAGCAAGCATTaGAGAGGGGTGTGGCTCCGT +
Preference number: 4 (lower is better)
Translates to: PRCFLEPPDQAHFCPEHFRCSKH*RGVWLR
Trigger: ACGGAGCCACACCCCTCTTCAATGCTTGCTGCAGCG...GAAATGCTCAGGGCAAAAGTGCGCTTGATCTGGCGGCTCCAAAAAGCAGCGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000485437.2
CDS-3UTR TCA 90 bp CTTCACGGAGCAAGAGTGCCTGCTCCACGCTGCTTTTTGGAGCCGCCAGATCAACGGTTAGCAGGTGGATaGCCTCCACATTGGACTGCC +
Preference number: 4 (lower is better)
Translates to: LHGARVPAPRCFLEPPDQRLAGG*PPHWTA
Trigger: GGCAGTCCAATGTGGAGGTCATCCACCTGCTAACCG...TTGATCTGGCGGCTCCAAAAAGCAGCGTGGAGCAGGCACTCTTGCTCCGTGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485437.2
CDS-3UTR GCA 90 bp TGGCTTGATGACATGCTCGACCGAGACACTTCCGGACACACAGGCGGCAGAGCTGTGACCTCCAAGGCATaGCTCGTGGAGAGAAGACAC +
Preference number: 4 (lower is better)
Translates to: WLDDMLDRDTSGHTGGRAVTSKA*LVERRH
Trigger: GTGTCTTCTCTCCACGAGGCATGCCTTGGAGGTCAC...AGCTCTGCCGCCTGTGTGTCCGGAAGTGTCTCGGTCGAGCATGTCATCAAGCCA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485437.2
CDS-3UTR GCA 90 bp AGTCTACCCTCTGGTAGGTGCAGGCCACATATAGGGGAGTTCCGAGCTGAGGCAGTGCCTGCTCCACGCTaGTTTTTGGAGCCGCCAGAT +
Preference number: 4 (lower is better)
Translates to: SLPSGRCRPHIGEFRAEAVPAPR*FLEPPD
Trigger: ATCTGGCGGCTCCAAAAAGCAGCGTGGAGCAGGCAC...TGCCTCAGCTCGGAACTCCCCTATATGTGGCCTGCACCTACCAGAGGGTAGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485437.2
CDS-3UTR CCA 90 bp CAGTGCTTGGGTTGCAACATGCCTCAGACAATGCCTGTGGGTTCAGGTTGTTGGGGGGTGTCCAGCCACTaGCCATGGTCGACACTGGCT +
Preference number: 4 (lower is better)
Translates to: QCLGCNMPQTMPVGSGCWGVSSH*PWSTLA
Trigger: AGCCAGTGTCGACCATGGCCAGTGGCTGGACACCCC...CCAACAACCTGAACCCACAGGCATTGTCTGAGGCATGTTGCAACCCAAGCACTG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR CCA 90 bp GCTGGGAAAGAGCAGGTGGGCCTTCACGGAGCAAGAGTGCCTGCTCCACGCTGCGATGTAGCTTGTGGATaGCTTGATGACATGCTCGAC +
Preference number: 4 (lower is better)
Translates to: AGKEQVGLHGARVPAPRCDVACG*LDDMLD
Trigger: GTCGAGCATGTCATCAAGCCATCCACAAGCTACATC...GCAGCGTGGAGCAGGCACTCTTGCTCCGTGAAGGCCCACCTGCTCTTTCCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485437.2
3UTR CAA 72 bp CTTCACGGAGCAAGAGTGCCTGCTCCACGCTGCTTTTaGGAGCCGCCAGATCAAGCGCACTTTTGCCCTGAG +
Preference number: 4 (lower is better)
Translates to: LHGARVPAPRCF*EPPDQAHFCPE
Trigger: CTCAGGGCAAAAGTGCGCTTGATCTGGCGGCTCCAAAAAGCAGCGTGGAGCAGGCACTCTTGCTCCGTGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485437.2
CDS-3UTR TCA 90 bp CAGTGCTTGGGTTGCAACATGCCTCAGACAATGCCTGTGGGTTCAGGTTGTTGGCGCTGCAGCAAGCATTaGAGAGGGGTGTGGCTCCGT +
Preference number: 4 (lower is better)
Translates to: QCLGCNMPQTMPVGSGCWRCSKH*RGVWLR
Trigger: ACGGAGCCACACCCCTCTTCAATGCTTGCTGCAGCG...CCAACAACCTGAACCCACAGGCATTGTCTGAGGCATGTTGCAACCCAAGCACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR TCA 90 bp CCACGCTGCTTTTTGGAGCCGCCAGATCAAGCGCACTTTTGCCCTGAGCATTTCAGGGGAGTTCCGAGCTaGGGCACCTCATGGTCAATG +
Preference number: 4 (lower is better)
Translates to: PRCFLEPPDQAHFCPEHFRGVPS*GTSWSM
Trigger: CATTGACCATGAGGTGCCTCAGCTCGGAACTCCCCT...GAAATGCTCAGGGCAAAAGTGCGCTTGATCTGGCGGCTCCAAAAAGCAGCGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000485437.2
CDS-3UTR GCA 90 bp GACAATGCCTGTGGGTTCAGGTTGTTGGGGACACCCAGTGTTCTCAATCCTAGAATGGGCGAGGCCAGGTaGACCTCCAACTGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: DNACGFRLLGTPSVLNPRMGEAR*TSNWAL
Trigger: CAAGGCCCAGTTGGAGGTGCACCTGGCCTCGCCCAT...TCTAGGATTGAGAACACTGGGTGTCCCCAACAACCTGAACCCACAGGCATTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR GCA 90 bp GTGGATGGCTTGATGACATGCTCGACCGAGACACTTCCGGACACACAGGCGGCATTCACGGAGCAAGAGTaGCTGCTCCACGCTGCTTTT +
Preference number: 4 (lower is better)
Translates to: VDGLMTCSTETLPDTQAAFTEQE*LLHAAF
Trigger: AAAAGCAGCGTGGAGCAGGCACTCTTGCTCCGTGAA...TGCCGCCTGTGTGTCCGGAAGTGTCTCGGTCGAGCATGTCATCAAGCCATCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485437.2
CDS-3UTR GCA 90 bp TGCCTCAGACAATGCCTGTGGGTTCAGGTTGTTGGGGACACCCAGTGTTCTCAACCTGACAGTGCGATCTaGCTGCCTCGGCCTCCCAAA +
Preference number: 4 (lower is better)
Translates to: CLRQCLWVQVVGDTQCSQPDSAI*LPRPPK
Trigger: TTTGGGAGGCCGAGGCAGGCAGATCGCACTGTCAGG...TTGAGAACACTGGGTGTCCCCAACAACCTGAACCCACAGGCATTGTCTGAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380470.7
ENST00000480796.6
CDS-3UTR GCA 90 bp GAAAGAGCAGGTGGGCCTTCACGGAGCAAGAGTGCCTGCTCCACGCTGCTTTTTAGACTCTCTCTTCACTaGCTCATGGATGGGCGAGGC +
Preference number: 4 (lower is better)
Translates to: ERAGGPSRSKSACSTLLFRLSLH*LMDGRG
Trigger: GCCTCGCCCATCCATGAGGCAGTGAAGAGAGAGTCT...AAAAAGCAGCGTGGAGCAGGCACTCTTGCTCCGTGAAGGCCCACCTGCTCTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485437.2
CDS-3UTR CCA 90 bp CAGTGCTTGGGTTGCAACATGCCTCAGACAATGCCTGTGGGTTCAGGTTGTTGGCTCTTCACTGCCTCATaGATGGGCGAGGCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: QCLGCNMPQTMPVGSGCWLFTAS*MGEARC
Trigger: GCACCTGGCCTCGCCCATCCATGAGGCAGTGAAGAG...CCAACAACCTGAACCCACAGGCATTGTCTGAGGCATGTTGCAACCCAAGCACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR CCA 90 bp AAAGAGCAGGTGGGCCTTCACGGAGCAAGAGTGCCTGCTCCACGCTGCTTTTTGTCCAGCCACTGGCCATaGTCGACACTGGCTCCTAAT +
Preference number: 4 (lower is better)
Translates to: KEQVGLHGARVPAPRCFLSSHWP*STLAPN
Trigger: ATTAGGAGCCAGTGTCGACCATGGCCAGTGGCTGGA...CAAAAAGCAGCGTGGAGCAGGCACTCTTGCTCCGTGAAGGCCCACCTGCTCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485437.2
CDS-3UTR CCA 90 bp GACAATGCCTGTGGGTTCAGGTTGTTGGGGACACCCAGTGTTCTCAATCCTAGATGCCTCGCTGCAGCATaGAGTGGGGTGTCCAGCCAC +
Preference number: 4 (lower is better)
Translates to: DNACGFRLLGTPSVLNPRCLAAA*SGVSSH
Trigger: GTGGCTGGACACCCCACTCCATGCTGCAGCGAGGCA...TCTAGGATTGAGAACACTGGGTGTCCCCAACAACCTGAACCCACAGGCATTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR CCA 90 bp TTGCTGGCTCCTGTGCACTGTAGGGTGATTAGCTGCATCCCTGATCTCCACCGTCTGGGAAAGAGCAGGTaGGCCTTCACGGAGCAAGAG +
Preference number: 4 (lower is better)
Translates to: LLAPVHCRVISCIPDLHRLGKSR*AFTEQE
Trigger: CTCTTGCTCCGTGAAGGCCCACCTGCTCTTTCCCAG...ACGGTGGAGATCAGGGATGCAGCTAATCACCCTACAGTGCACAGGAGCCAGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380470.7
ENST00000480796.6
CDS-3UTR CCA 90 bp CCACGCTGCTTTTTGGAGCCGCCAGATCAAGCGCACTTTTGCCCTGAGCATTTCCACTGCACTGCAGCCTaGGCAACAGCACGAGACTCT +
Preference number: 4 (lower is better)
Translates to: PRCFLEPPDQAHFCPEHFHCTAA*ATARDS
Trigger: AGAGTCTCGTGCTGTTGCCCAGGCTGCAGTGCAGTG...GAAATGCTCAGGGCAAAAGTGCGCTTGATCTGGCGGCTCCAAAAAGCAGCGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485437.2
CDS-3UTR TCA 90 bp CAGTGCTTGGGTTGCAACATGCCTCAGACAATGCCTGTGGGTTCAGGTTGTTGGAGGGGTGTGGCTCCGTaGACTGTCACTCCATTGACG +
Preference number: 4 (lower is better)
Translates to: QCLGCNMPQTMPVGSGCWRGVAP*TVTPLT
Trigger: CGTCAATGGAGTGACAGTTCACGGAGCCACACCCCT...CCAACAACCTGAACCCACAGGCATTGTCTGAGGCATGTTGCAACCCAAGCACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR TCA 90 bp CAACCTCTGGGTGCACTGATCTCTTCCAAAGTCTCTCTTATCAACCAGGACCGCCGCTGCAGCAAGCATTaGAGAGGGGTGTGGCTCCGT +
Preference number: 4 (lower is better)
Translates to: QPLGALISSKVSLINQDRRCSKH*RGVWLR
Trigger: ACGGAGCCACACCCCTCTTCAATGCTTGCTGCAGCG...GCGGTCCTGGTTGATAAGAGAGACTTTGGAAGAGATCAGTGCACCCAGAGGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR TCA 90 bp CAGTGCTTGGGTTGCAACATGCCTCAGACAATGCCTGTGGGTTCAGGTTGTTGGCGGTTAGCAGGTGGATaGCCTCCACATTGGACTGCC +
Preference number: 4 (lower is better)
Translates to: QCLGCNMPQTMPVGSGCWRLAGG*PPHWTA
Trigger: GGCAGTCCAATGTGGAGGTCATCCACCTGCTAACCG...CCAACAACCTGAACCCACAGGCATTGTCTGAGGCATGTTGCAACCCAAGCACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR TCA 90 bp GTGGATGGCTTGATGACATGCTCGACCGAGACACTTCCGGACACACAGGCGGCATCCATGCACTCTCTGTaGCCTGTAATCCCAGCTACT +
Preference number: 4 (lower is better)
Translates to: VDGLMTCSTETLPDTQAASMHSL*PVIPAT
Trigger: AGTAGCTGGGATTACAGGTCACAGAGAGTGCATGGA...TGCCGCCTGTGTGTCCGGAAGTGTCTCGGTCGAGCATGTCATCAAGCCATCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485437.2
CDS-3UTR GCA 90 bp TGCCTCAGACAATGCCTGTGGGTTCAGGTTGTTGGGGACACCCAGTGTTCTCAAGTGACCTCTCTTCACTaGCTCATGGATGGGCGAGGC +
Preference number: 4 (lower is better)
Translates to: CLRQCLWVQVVGDTQCSQVTSLH*LMDGRG
Trigger: GCCTCGCCCATCCATGAGGCAGTGAAGAGAGGTCAC...TTGAGAACACTGGGTGTCCCCAACAACCTGAACCCACAGGCATTGTCTGAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR GCA 90 bp CAGTGCTTGGGTTGCAACATGCCTCAGACAATGCCTGTGGGTTCAGGTTGTTGGGTGACCTCTCTTCACTaGCTCATGGATGGGCGAGGC +
Preference number: 4 (lower is better)
Translates to: QCLGCNMPQTMPVGSGCWVTSLH*LMDGRG
Trigger: GCCTCGCCCATCCATGAGGCAGTGAAGAGAGGTCAC...CCAACAACCTGAACCCACAGGCATTGTCTGAGGCATGTTGCAACCCAAGCACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR GCA 90 bp CTCCACGCTGCTTTTTGGAGCCGCCAGATCAAGCGCACTTTTGCCCTGAGCATTCGGAGCAAGAGTGCCTaGTCCACGCTGCTTTTTGGA +
Preference number: 4 (lower is better)
Translates to: LHAAFWSRQIKRTFALSIRSKSA*STLLFG
Trigger: TCCAAAAAGCAGCGTGGAGCAGGCACTCTTGCTCCG...AATGCTCAGGGCAAAAGTGCGCTTGATCTGGCGGCTCCAAAAAGCAGCGTGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000485437.2
CDS-3UTR GCA 90 bp GAAAGAGCAGGTGGGCCTTCACGGAGCAAGAGTGCCTGCTCCACGCTGCTTTTTGATGGCTTGATGACATaGTCGACCGAGACACTTCCG +
Preference number: 4 (lower is better)
Translates to: ERAGGPSRSKSACSTLLFDGLMT*STETLP
Trigger: CGGAAGTGTCTCGGTCGAGCATGTCATCAAGCCATC...AAAAAGCAGCGTGGAGCAGGCACTCTTGCTCCGTGAAGGCCCACCTGCTCTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485437.2
CDS-3UTR CCA 90 bp TGGCTTGATGACATGCTCGACCGAGACACTTCCGGACACACAGGCGGCAGAGCTTTTCCAATAAGGCTTTaGCACAGGCCACGTGACCTC +
Preference number: 4 (lower is better)
Translates to: WLDDMLDRDTSGHTGGRAFPIRL*HRPRDL
Trigger: GAGGTCACGTGGCCTGTGCCAAAGCCTTATTGGAAA...AGCTCTGCCGCCTGTGTGTCCGGAAGTGTCTCGGTCGAGCATGTCATCAAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485437.2
CDS-3UTR CCA 90 bp TTGCTGGCTCCTGTGCACTGTAGGGTGATTAGCTGCATCCCTGATCTCCACCGTTCCAGCCACTGGCCATaGTCGACACTGGCTCCTAAT +
Preference number: 4 (lower is better)
Translates to: LLAPVHCRVISCIPDLHRSSHWP*STLAPN
Trigger: ATTAGGAGCCAGTGTCGACCATGGCCAGTGGCTGGA...ACGGTGGAGATCAGGGATGCAGCTAATCACCCTACAGTGCACAGGAGCCAGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380470.7
ENST00000480796.6
CDS-3UTR CCA 90 bp TGCCTCAGACAATGCCTGTGGGTTCAGGTTGTTGGGGACACCCAGTGTTCTCAACTCCACGCTGCTTTTTaGAGCCGCCAGATCAAGCGC +
Preference number: 4 (lower is better)
Translates to: CLRQCLWVQVVGDTQCSQLHAAF*SRQIKR
Trigger: GCGCTTGATCTGGCGGCTCCAAAAAGCAGCGTGGAG...TTGAGAACACTGGGTGTCCCCAACAACCTGAACCCACAGGCATTGTCTGAGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR TCA 90 bp ATCGTTCGAGTGGCTCTGGCAGATGTAGCTTGTGGATGGCTTGATGACATGCTCAGGGGTGTGGCTCCGTaGACTGTCACTCCATTGACG +
Preference number: 4 (lower is better)
Translates to: IVRVALADVACGWLDDMLRGVAP*TVTPLT
Trigger: CGTCAATGGAGTGACAGTTCACGGAGCCACACCCCT...GAGCATGTCATCAAGCCATCCACAAGCTACATCTGCCAGAGCCACTCGAACGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485437.2
CDS-3UTR TCA 90 bp CAACCTCTGGGTGCACTGATCTCTTCCAAAGTCTCTCTTATCAACCAGGACCGCAGGGGAGTTCCGAGCTaGGGCACCTCATGGTCAATG +
Preference number: 4 (lower is better)
Translates to: QPLGALISSKVSLINQDRRGVPS*GTSWSM
Trigger: CATTGACCATGAGGTGCCTCAGCTCGGAACTCCCCT...GCGGTCCTGGTTGATAAGAGAGACTTTGGAAGAGATCAGTGCACCCAGAGGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR TCA 90 bp GACAATGCCTGTGGGTTCAGGTTGTTGGGGACACCCAGTGTTCTCAATCCTAGATTGGCACAGGCCACGTaGCCTCCAAGGCATGCTTGT +
Preference number: 4 (lower is better)
Translates to: DNACGFRLLGTPSVLNPRLAQAT*PPRHAC
Trigger: ACAAGCATGCCTTGGAGGTCACGTGGCCTGTGCCAA...TCTAGGATTGAGAACACTGGGTGTCCCCAACAACCTGAACCCACAGGCATTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380470.7
CDS-3UTR GCA 90 bp TGCCTCAGACAATGCCTGTGGGTTCAGGTTGTTGGGGACACCCAGTGTTCTCAAGTGACCTCCAAGGCATaGCTCGTGGAGAGAAGACAC +
Preference number: 4 (lower is better)
Translates to: CLRQCLWVQVVGDTQCSQVTSKA*LVERRH
Trigger: GTGTCTTCTCTCCACGAGGCATGCCTTGGAGGTCAC...TTGAGAACACTGGGTGTCCCCAACAACCTGAACCCACAGGCATTGTCTGAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344384.8
ENST00000480796.6
CDS-3UTR GCA 90 bp CAGTGCTTGGGTTGCAACATGCCTCAGACAATGCCTGTGGGTTCAGGTTGTTGGACCTCCACATTGGACTaGCTCGCTGCAGCATGGAGT +
Preference number: 4 (lower is better)
Translates to: QCLGCNMPQTMPVGSGCWTSTLD*LAAAWS
Trigger: ACTCCATGCTGCAGCGAGGCAGTCCAATGTGGAGGT...CCAACAACCTGAACCCACAGGCATTGTCTGAGGCATGTTGCAACCCAAGCACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR CCA 90 bp TGCCTCAGACAATGCCTGTGGGTTCAGGTTGTTGGGGACACCCAGTGTTCTCAATCCAGCCACTGGCCATaGTCGACACTGGCTCCTAAT +
Preference number: 4 (lower is better)
Translates to: CLRQCLWVQVVGDTQCSQSSHWP*STLAPN
Trigger: ATTAGGAGCCAGTGTCGACCATGGCCAGTGGCTGGA...TTGAGAACACTGGGTGTCCCCAACAACCTGAACCCACAGGCATTGTCTGAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR CCA 90 bp GTGATTAGCTGCATCCCTGATCTCCACCGTCTAGATGATAGTAGCAATTCTCCCGGGGTGTCCAGCCACTaGCCATGGTCGACACTGGCT +
Preference number: 4 (lower is better)
Translates to: VISCIPDLHRLDDSSNSPGVSSH*PWSTLA
Trigger: AGCCAGTGTCGACCATGGCCAGTGGCTGGACACCCC...GGGAGAATTGCTACTATCATCTAGACGGTGGAGATCAGGGATGCAGCTAATCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380470.7
ENST00000480796.6
CDS-3UTR CCA 90 bp GACAATGCCTGTGGGTTCAGGTTGTTGGGGACACCCAGTGTTCTCAATCCTAGACTCCACGCTGCTTTTTaGAGCCGCCAGATCAAGCGC +
Preference number: 4 (lower is better)
Translates to: DNACGFRLLGTPSVLNPRLHAAF*SRQIKR
Trigger: GCGCTTGATCTGGCGGCTCCAAAAAGCAGCGTGGAG...TCTAGGATTGAGAACACTGGGTGTCCCCAACAACCTGAACCCACAGGCATTGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR CCA 90 bp CAACCTCTGGGTGCACTGATCTCTTCCAAAGTCTCTCTTATCAACCAGGACCGCCTGGGAAAGAGCAGGTaGGCCTTCACGGAGCAAGAG +
Preference number: 4 (lower is better)
Translates to: QPLGALISSKVSLINQDRLGKSR*AFTEQE
Trigger: CTCTTGCTCCGTGAAGGCCCACCTGCTCTTTCCCAG...GCGGTCCTGGTTGATAAGAGAGACTTTGGAAGAGATCAGTGCACCCAGAGGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR TCA 90 bp TGCCTCAGACAATGCCTGTGGGTTCAGGTTGTTGGGGACACCCAGTGTTCTCAATCCATGCACTCTCTGTaGCCTCTCTTCACTGCCTCA +
Preference number: 4 (lower is better)
Translates to: CLRQCLWVQVVGDTQCSQSMHSL*PLFTAS
Trigger: TGAGGCAGTGAAGAGAGGTCACAGAGAGTGCATGGA...TTGAGAACACTGGGTGTCCCCAACAACCTGAACCCACAGGCATTGTCTGAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR TCA 90 bp CAGTGCTTGGGTTGCAACATGCCTCAGACAATGCCTGTGGGTTCAGGTTGTTGGTCCATGCACTCTCTGTaGCCTCTCTTCACTGCCTCA +
Preference number: 4 (lower is better)
Translates to: QCLGCNMPQTMPVGSGCWSMHSL*PLFTAS
Trigger: TGAGGCAGTGAAGAGAGGTCACAGAGAGTGCATGGA...CCAACAACCTGAACCCACAGGCATTGTCTGAGGCATGTTGCAACCCAAGCACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR TCA 90 bp CAGTGCTTGGGTTGCAACATGCCTCAGACAATGCCTGTGGGTTCAGGTTGTTGGATATTGACCCAGCATTaGGCCCACTTTGGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: QCLGCNMPQTMPVGSGCWILTQH*AHFGGW
Trigger: CCAGCCACCAAAGTGGGCTCAATGCTGGGTCAATAT...CCAACAACCTGAACCCACAGGCATTGTCTGAGGCATGTTGCAACCCAAGCACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR TCA 90 bp CAGTGCTTGGGTTGCAACATGCCTCAGACAATGCCTGTGGGTTCAGGTTGTTGGTGGAGTGCAGTGGCGTaGTCTTGGCTTACTGCAATC +
Preference number: 4 (lower is better)
Translates to: QCLGCNMPQTMPVGSGCWWSAVA*SWLTAI
Trigger: GATTGCAGTAAGCCAAGATCACGCCACTGCACTCCA...CCAACAACCTGAACCCACAGGCATTGTCTGAGGCATGTTGCAACCCAAGCACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380470.7
ENST00000480796.6
CDS-3UTR GCA 90 bp CAACCTCTGGGTGCACTGATCTCTTCCAAAGTCTCTCTTATCAACCAGGACCGCGTGACCTCCAAGGCATaGCTCGTGGAGAGAAGACAC +
Preference number: 4 (lower is better)
Translates to: QPLGALISSKVSLINQDRVTSKA*LVERRH
Trigger: GTGTCTTCTCTCCACGAGGCATGCCTTGGAGGTCAC...GCGGTCCTGGTTGATAAGAGAGACTTTGGAAGAGATCAGTGCACCCAGAGGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344384.8
ENST00000480796.6
CDS-3UTR GCA 90 bp TCTGCAGACATTGACAAATGTCTCAGTGGGAGTGGGGCAAAATTGTCTCCAGTTATGGGCGAGGCCAGGTaGACCTCCAACTGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: SADIDKCLSGSGAKLSPVMGEAR*TSNWAL
Trigger: CAAGGCCCAGTTGGAGGTGCACCTGGCCTCGCCCAT...AACTGGAGACAATTTTGCCCCACTCCCACTGAGACATTTGTCAATGTCTGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380470.7
ENST00000480796.6
CDS-3UTR GCA 90 bp ATTGGTATAGGAGGAATCGTTCGAGTGGCTCTGGCAGATGTAGCTTGTGGATGGATTGGACTGCCTCGCTaGAGCATGGAGTGGGGTGTC +
Preference number: 4 (lower is better)
Translates to: IGIGGIVRVALADVACGWIGLPR*SMEWGV
Trigger: GACACCCCACTCCATGCTGCAGCGAGGCAGTCCAAT...CCATCCACAAGCTACATCTGCCAGAGCCACTCGAACGATTCCTCCTATACCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485437.2
CDS-3UTR GCA 90 bp CAGTGCTTGGGTTGCAACATGCCTCAGACAATGCCTGTGGGTTCAGGTTGTTGGTTCACGGAGCAAGAGTaGCTGCTCCACGCTGCTTTT +
Preference number: 4 (lower is better)
Translates to: QCLGCNMPQTMPVGSGCWFTEQE*LLHAAF
Trigger: AAAAGCAGCGTGGAGCAGGCACTCTTGCTCCGTGAA...CCAACAACCTGAACCCACAGGCATTGTCTGAGGCATGTTGCAACCCAAGCACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR GCA 90 bp TGCCTCAGACAATGCCTGTGGGTTCAGGTTGTTGGGGACACCCAGTGTTCTCAAGATGGCTTGATGACATaGTCGACCGAGACACTTCCG +
Preference number: 4 (lower is better)
Translates to: CLRQCLWVQVVGDTQCSQDGLMT*STETLP
Trigger: CGGAAGTGTCTCGGTCGAGCATGTCATCAAGCCATC...TTGAGAACACTGGGTGTCCCCAACAACCTGAACCCACAGGCATTGTCTGAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR GCA 90 bp CAGTGCTTGGGTTGCAACATGCCTCAGACAATGCCTGTGGGTTCAGGTTGTTGGGATGGCTTGATGACATaGTCGACCGAGACACTTCCG +
Preference number: 4 (lower is better)
Translates to: QCLGCNMPQTMPVGSGCWDGLMT*STETLP
Trigger: CGGAAGTGTCTCGGTCGAGCATGTCATCAAGCCATC...CCAACAACCTGAACCCACAGGCATTGTCTGAGGCATGTTGCAACCCAAGCACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR GCA 90 bp TTGCTGGCTCCTGTGCACTGTAGGGTGATTAGCTGCATCCCTGATCTCCACCGTAGCCAGTGCTTGGGTTaGAACATGCCTCAGACAATG +
Preference number: 4 (lower is better)
Translates to: LLAPVHCRVISCIPDLHRSQCLG*NMPQTM
Trigger: CATTGTCTGAGGCATGTTGCAACCCAAGCACTGGCT...ACGGTGGAGATCAGGGATGCAGCTAATCACCCTACAGTGCACAGGAGCCAGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380470.7
ENST00000480796.6
CDS-3UTR CCA 90 bp GTGATTAGCTGCATCCCTGATCTCCACCGTCTAGATGATAGTAGCAATTCTCCCTCACTGCCTCATGGATaGGCGAGGCCAGGTGCACCT +
Preference number: 4 (lower is better)
Translates to: VISCIPDLHRLDDSSNSPSLPHG*ARPGAP
Trigger: AGGTGCACCTGGCCTCGCCCATCCATGAGGCAGTGA...GGGAGAATTGCTACTATCATCTAGACGGTGGAGATCAGGGATGCAGCTAATCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380470.7
ENST00000480796.6
CDS-3UTR CCA 90 bp TGCCTCAGACAATGCCTGTGGGTTCAGGTTGTTGGGGACACCCAGTGTTCTCAAGTGGGTTCAGGTTGTTaGGGACACCCAGTGTTCTCA +
Preference number: 4 (lower is better)
Translates to: CLRQCLWVQVVGDTQCSQVGSGC*GHPVFS
Trigger: TGAGAACACTGGGTGTCCCCAACAACCTGAACCCAC...TTGAGAACACTGGGTGTCCCCAACAACCTGAACCCACAGGCATTGTCTGAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR TCA 90 bp TTCAGGTTGTTGGGGACACCCAGTGTTCTCAATCCTAGAACTGCTTACTTCAAATTGGCACAGGCCACGTaGCCTCCAAGGCATGCCTCG +
Preference number: 4 (lower is better)
Translates to: FRLLGTPSVLNPRTAYFKLAQAT*PPRHAS
Trigger: CGAGGCATGCCTTGGAGGTCACGTGGCCTGTGCCAA...TTTGAAGTAAGCAGTTCTAGGATTGAGAACACTGGGTGTCCCCAACAACCTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344384.8
ENST00000480796.6
CDS-3UTR TCA 90 bp GTGATTAGCTGCATCCCTGATCTCCACCGTCTAGATGATAGTAGCAATTCTCCCAGGGGTGTGGCTCCGTaGACTGTCACTCCATTGACG +
Preference number: 4 (lower is better)
Translates to: VISCIPDLHRLDDSSNSPRGVAP*TVTPLT
Trigger: CGTCAATGGAGTGACAGTTCACGGAGCCACACCCCT...GGGAGAATTGCTACTATCATCTAGACGGTGGAGATCAGGGATGCAGCTAATCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380470.7
ENST00000480796.6
CDS-3UTR TCA 90 bp GTGATTAGCTGCATCCCTGATCTCCACCGTCTAGATGATAGTAGCAATTCTCCCACTCCAGCAGCACATTaGCACATGCAGCACTGCCGC +
Preference number: 4 (lower is better)
Translates to: VISCIPDLHRLDDSSNSPTPAAH*HMQHCR
Trigger: GCGGCAGTGCTGCATGTGTCAATGTGCTGCTGGAGT...GGGAGAATTGCTACTATCATCTAGACGGTGGAGATCAGGGATGCAGCTAATCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380470.7
ENST00000480796.6
CDS-3UTR TCA 90 bp GTGATTAGCTGCATCCCTGATCTCCACCGTCTAGATGATAGTAGCAATTCTCCCCGGTTAGCAGGTGGATaGCCTCCACATTGGACTGCC +
Preference number: 4 (lower is better)
Translates to: VISCIPDLHRLDDSSNSPRLAGG*PPHWTA
Trigger: GGCAGTCCAATGTGGAGGTCATCCACCTGCTAACCG...GGGAGAATTGCTACTATCATCTAGACGGTGGAGATCAGGGATGCAGCTAATCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380470.7
ENST00000480796.6
CDS-3UTR GCA 90 bp CAACCTCTGGGTGCACTGATCTCTTCCAAAGTCTCTCTTATCAACCAGGACCGCCCAGCAGGATCTCCATaGACTCTCTGTGACCTCTCT +
Preference number: 4 (lower is better)
Translates to: QPLGALISSKVSLINQDRPAGSP*TLCDLS
Trigger: AGAGAGGTCACAGAGAGTGCATGGAGATCCTGCTGG...GCGGTCCTGGTTGATAAGAGAGACTTTGGAAGAGATCAGTGCACCCAGAGGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR GCA 90 bp ATTGGTATAGGAGGAATCGTTCGAGTGGCTCTGGCAGATGTAGCTTGTGGATGGACCTCCACATTGGACTaGCTCGCTGCAGCATGGAGT +
Preference number: 4 (lower is better)
Translates to: IGIGGIVRVALADVACGWTSTLD*LAAAWS
Trigger: ACTCCATGCTGCAGCGAGGCAGTCCAATGTGGAGGT...CCATCCACAAGCTACATCTGCCAGAGCCACTCGAACGATTCCTCCTATACCAAT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485437.2
CDS-3UTR GCA 90 bp GTGATTAGCTGCATCCCTGATCTCCACCGTCTAGATGATAGTAGCAATTCTCCCGTGCCTGCTCCACGCTaGTTTTTGGAGCCGCCAGAT +
Preference number: 4 (lower is better)
Translates to: VISCIPDLHRLDDSSNSPVPAPR*FLEPPD
Trigger: ATCTGGCGGCTCCAAAAAGCAGCGTGGAGCAGGCAC...GGGAGAATTGCTACTATCATCTAGACGGTGGAGATCAGGGATGCAGCTAATCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380470.7
ENST00000480796.6
CDS-3UTR GCA 90 bp GACAATGCCTGTGGGTTCAGGTTGTTGGGGACACCCAGTGTTCTCAATCCTAGAGCTTGGGTTGCAACATaGCTCAGACAATGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: DNACGFRLLGTPSVLNPRAWVAT*LRQCLW
Trigger: CCACAGGCATTGTCTGAGGCATGTTGCAACCCAAGC...TCTAGGATTGAGAACACTGGGTGTCCCCAACAACCTGAACCCACAGGCATTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR GCA 90 bp TCTGCAGACATTGACAAATGTCTCAGTGGGAGTGGGGCAAAATTGTCTCCAGTTCCTGACAGTGCGATCTaGCTGCCTCGGCCTCCCAAA +
Preference number: 4 (lower is better)
Translates to: SADIDKCLSGSGAKLSPVPDSAI*LPRPPK
Trigger: TTTGGGAGGCCGAGGCAGGCAGATCGCACTGTCAGG...AACTGGAGACAATTTTGCCCCACTCCCACTGAGACATTTGTCAATGTCTGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380470.7
ENST00000480796.6
CDS-3UTR GCA 90 bp GGAGGAATCGTTCGAGTGGCTCTGGCAGATGTAGCTTGTGGATGGCTTGATGACCCAGGAGCCAGAGGTTaGAATGAGCAGAAATCATGC +
Preference number: 4 (lower is better)
Translates to: GGIVRVALADVACGWLDDPGARG*NEQKSC
Trigger: GCATGATTTCTGCTCATTGCAACCTCTGGCTCCTGG...GTCATCAAGCCATCCACAAGCTACATCTGCCAGAGCCACTCGAACGATTCCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485437.2
CDS-3UTR CCA 90 bp TGCCTCAGACAATGCCTGTGGGTTCAGGTTGTTGGGGACACCCAGTGTTCTCAATTTCCAATAAGGCTTTaGCACAGGCCACGTGACCTC +
Preference number: 4 (lower is better)
Translates to: CLRQCLWVQVVGDTQCSQFPIRL*HRPRDL
Trigger: GAGGTCACGTGGCCTGTGCCAAAGCCTTATTGGAAA...TTGAGAACACTGGGTGTCCCCAACAACCTGAACCCACAGGCATTGTCTGAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR CCA 90 bp TCTGCAGACATTGACAAATGTCTCAGTGGGAGTGGGGCAAAATTGTCTCCAGTTCCTCCAACTGGGCCTTaGCTCCGAACTCCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: SADIDKCLSGSGAKLSPVPPTGP*LRTPAA
Trigger: TGCTGCTGGAGTTCGGAGCCAAGGCCCAGTTGGAGG...AACTGGAGACAATTTTGCCCCACTCCCACTGAGACATTTGTCAATGTCTGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380470.7
ENST00000480796.6
CDS-3UTR CCA 90 bp TCTGCAGACATTGACAAATGTCTCAGTGGGAGTGGGGCAAAATTGTCTCCAGTTAGGTGCACCTCCAACTaGGCCTTGGCTCCGAACTCC +
Preference number: 4 (lower is better)
Translates to: SADIDKCLSGSGAKLSPVRCTSN*ALAPNS
Trigger: GGAGTTCGGAGCCAAGGCCCAGTTGGAGGTGCACCT...AACTGGAGACAATTTTGCCCCACTCCCACTGAGACATTTGTCAATGTCTGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380470.7
ENST00000480796.6
CDS-3UTR CCA 90 bp TTGCTGGCTCCTGTGCACTGTAGGGTGATTAGCTGCATCCCTGATCTCCACCGTGGCCATGGTCGACACTaGCTCCTAATTCTAGAAGTT +
Preference number: 4 (lower is better)
Translates to: LLAPVHCRVISCIPDLHRGHGRH*LLILEV
Trigger: AACTTCTAGAATTAGGAGCCAGTGTCGACCATGGCC...ACGGTGGAGATCAGGGATGCAGCTAATCACCCTACAGTGCACAGGAGCCAGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380470.7
ENST00000480796.6
CDS-3UTR CCA 90 bp CAACCTCTGGGTGCACTGATCTCTTCCAAAGTCTCTCTTATCAACCAGGACCGCCTCAGACAATGCCTGTaGGTTCAGGTTGTTGGGGAC +
Preference number: 4 (lower is better)
Translates to: QPLGALISSKVSLINQDRLRQCL*VQVVGD
Trigger: GTCCCCAACAACCTGAACCCACAGGCATTGTCTGAG...GCGGTCCTGGTTGATAAGAGAGACTTTGGAAGAGATCAGTGCACCCAGAGGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR TCA 90 bp TCTGCAGACATTGACAAATGTCTCAGTGGGAGTGGGGCAAAATTGTCTCCAGTTAGGGGTGTGGCTCCGTaGACTGTCACTCCATTGACG +
Preference number: 4 (lower is better)
Translates to: SADIDKCLSGSGAKLSPVRGVAP*TVTPLT
Trigger: CGTCAATGGAGTGACAGTTCACGGAGCCACACCCCT...AACTGGAGACAATTTTGCCCCACTCCCACTGAGACATTTGTCAATGTCTGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000380470.7
ENST00000480796.6
CDS-3UTR TCA 90 bp TTCAGGTTGTTGGGGACACCCAGTGTTCTCAATCCTAGAACTGCTTACTTCAAACGCTGCAGCAAGCATTaGAGAGGGGTGTGGCTCCGT +
Preference number: 4 (lower is better)
Translates to: FRLLGTPSVLNPRTAYFKRCSKH*RGVWLR
Trigger: ACGGAGCCACACCCCTCTTCAATGCTTGCTGCAGCG...TTTGAAGTAAGCAGTTCTAGGATTGAGAACACTGGGTGTCCCCAACAACCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR GCA 90 bp GTGATTAGCTGCATCCCTGATCTCCACCGTCTAGATGATAGTAGCAATTCTCCCCGGAGCAAGAGTGCCTaGTCCACGCTGCTTTTTGGA +
Preference number: 4 (lower is better)
Translates to: VISCIPDLHRLDDSSNSPRSKSA*STLLFG
Trigger: TCCAAAAAGCAGCGTGGAGCAGGCACTCTTGCTCCG...GGGAGAATTGCTACTATCATCTAGACGGTGGAGATCAGGGATGCAGCTAATCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380470.7
ENST00000480796.6
CDS-3UTR GCA 90 bp GACAATGCCTGTGGGTTCAGGTTGTTGGGGACACCCAGTGTTCTCAATCCTAGAAGCCAGTGCTTGGGTTaGAACATGCCTCAGACAATG +
Preference number: 4 (lower is better)
Translates to: DNACGFRLLGTPSVLNPRSQCLG*NMPQTM
Trigger: CATTGTCTGAGGCATGTTGCAACCCAAGCACTGGCT...TCTAGGATTGAGAACACTGGGTGTCCCCAACAACCTGAACCCACAGGCATTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR GCA 90 bp ATCGTTCGAGTGGCTCTGGCAGATGTAGCTTGTGGATGGCTTGATGACATGCTCAATGAGCAGAAATCATaGCACTGCACTGCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: IVRVALADVACGWLDDMLNEQKS*HCTAAW
Trigger: CCAGGCTGCAGTGCAGTGGCATGATTTCTGCTCATT...GAGCATGTCATCAAGCCATCCACAAGCTACATCTGCCAGAGCCACTCGAACGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485437.2
CDS-3UTR CCA 90 bp TGGCTCCTAATTCTAGAAGTTTCTTCACACAGTCTACCCTCTGGTAGGTGCAGGCCAAGGCATGCCTCGTaGAGAGAAGACACCCGGTTA +
Preference number: 4 (lower is better)
Translates to: WLLILEVSSHSLPSGRCRPRHAS*REDTRL
Trigger: TAACCGGGTGTCTTCTCTCCACGAGGCATGCCTTGG...CCTGCACCTACCAGAGGGTAGACTGTGTGAAGAAACTTCTAGAATTAGGAGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485437.2
CDS-3UTR CCA 90 bp GACAATGCCTGTGGGTTCAGGTTGTTGGGGACACCCAGTGTTCTCAATCCTAGATTTCCAATAAGGCTTTaGCACAGGCCACGTGACCTC +
Preference number: 4 (lower is better)
Translates to: DNACGFRLLGTPSVLNPRFPIRL*HRPRDL
Trigger: GAGGTCACGTGGCCTGTGCCAAAGCCTTATTGGAAA...TCTAGGATTGAGAACACTGGGTGTCCCCAACAACCTGAACCCACAGGCATTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR CCA 90 bp TTCAGGTTGTTGGGGACACCCAGTGTTCTCAATCCTAGAACTGCTTACTTCAAACCTCCAACTGGGCCTTaGCTCCGAACTCCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: FRLLGTPSVLNPRTAYFKPPTGP*LRTPAA
Trigger: TGCTGCTGGAGTTCGGAGCCAAGGCCCAGTTGGAGG...TTTGAAGTAAGCAGTTCTAGGATTGAGAACACTGGGTGTCCCCAACAACCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR CCA 90 bp TTCAGGTTGTTGGGGACACCCAGTGTTCTCAATCCTAGAACTGCTTACTTCAAATCACTGCCTCATGGATaGGCGAGGCCAGGTGCACCT +
Preference number: 4 (lower is better)
Translates to: FRLLGTPSVLNPRTAYFKSLPHG*ARPGAP
Trigger: AGGTGCACCTGGCCTCGCCCATCCATGAGGCAGTGA...TTTGAAGTAAGCAGTTCTAGGATTGAGAACACTGGGTGTCCCCAACAACCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR CCA 90 bp CAGTGCTTGGGTTGCAACATGCCTCAGACAATGCCTGTGGGTTCAGGTTGTTGGGGCCATGGTCGACACTaGCTCCTAATTCTAGAAGTT +
Preference number: 4 (lower is better)
Translates to: QCLGCNMPQTMPVGSGCWGHGRH*LLILEV
Trigger: AACTTCTAGAATTAGGAGCCAGTGTCGACCATGGCC...CCAACAACCTGAACCCACAGGCATTGTCTGAGGCATGTTGCAACCCAAGCACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR CCA 90 bp TTAGGTACTCTAGGTACAGCAGACAACAATCTGTGTCATTCCAAGTATCTTCCCTGCCTCGCTGCAGCATaGAGTGGGGTGTCCAGCCAC +
Preference number: 4 (lower is better)
Translates to: LGTLGTADNNLCHSKYLPCLAAA*SGVSSH
Trigger: GTGGCTGGACACCCCACTCCATGCTGCAGCGAGGCA...GGGAAGATACTTGGAATGACACAGATTGTTGTCTGCTGTACCTAGAGTACCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR CCA 90 bp TGCCTCAGACAATGCCTGTGGGTTCAGGTTGTTGGGGACACCCAGTGTTCTCAAGATGTAGCTTGTGGATaGCTTGATGACATGCTCGAC +
Preference number: 4 (lower is better)
Translates to: CLRQCLWVQVVGDTQCSQDVACG*LDDMLD
Trigger: GTCGAGCATGTCATCAAGCCATCCACAAGCTACATC...TTGAGAACACTGGGTGTCCCCAACAACCTGAACCCACAGGCATTGTCTGAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR CCA 90 bp TTGCTGGCTCCTGTGCACTGTAGGGTGATTAGCTGCATCCCTGATCTCCACCGTTTGAGCCCACTTTGGTaGCTGGCATCAGTATGTAAT +
Preference number: 4 (lower is better)
Translates to: LLAPVHCRVISCIPDLHRLSPLW*LASVCN
Trigger: ATTACATACTGATGCCAGCCACCAAAGTGGGCTCAA...ACGGTGGAGATCAGGGATGCAGCTAATCACCCTACAGTGCACAGGAGCCAGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380470.7
ENST00000480796.6
CDS-3UTR CCA 90 bp GACAATGCCTGTGGGTTCAGGTTGTTGGGGACACCCAGTGTTCTCAATCCTAGAGCATTGAGCCCACTTTaGTGGCTGGCATCAGTATGT +
Preference number: 4 (lower is better)
Translates to: DNACGFRLLGTPSVLNPRALSPL*WLASVC
Trigger: ACATACTGATGCCAGCCACCAAAGTGGGCTCAATGC...TCTAGGATTGAGAACACTGGGTGTCCCCAACAACCTGAACCCACAGGCATTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
3UTR CAA 72 bp CAACATGCCTCAGACAATGCCTGTGGGTTCAGGTTGTaGGGGACACCCAGTGTTCTCAATCCTAGAACTGCT +
Preference number: 4 (lower is better)
Translates to: QHASDNACGFRL*GTPSVLNPRTA
Trigger: AGCAGTTCTAGGATTGAGAACACTGGGTGTCCCCAACAACCTGAACCCACAGGCATTGTCTGAGGCATGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR TCA 90 bp CAACCTCTGGGTGCACTGATCTCTTCCAAAGTCTCTCTTATCAACCAGGACCGCATGGTCCGGACCTTCTaGTACGTTCTGAAACTTCAC +
Preference number: 4 (lower is better)
Translates to: QPLGALISSKVSLINQDRMVRTF*YVLKLH
Trigger: GTGAAGTTTCAGAACGTATCAGAAGGTCCGGACCAT...GCGGTCCTGGTTGATAAGAGAGACTTTGGAAGAGATCAGTGCACCCAGAGGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344384.8
CDS-3UTR TCA 90 bp TTCAGGTTGTTGGGGACACCCAGTGTTCTCAATCCTAGAACTGCTTACTTCAAAAGGGGAGTTCCGAGCTaGGGCACCTCATGGTCAATG +
Preference number: 4 (lower is better)
Translates to: FRLLGTPSVLNPRTAYFKRGVPS*GTSWSM
Trigger: CATTGACCATGAGGTGCCTCAGCTCGGAACTCCCCT...TTTGAAGTAAGCAGTTCTAGGATTGAGAACACTGGGTGTCCCCAACAACCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR TCA 90 bp GTGATTAGCTGCATCCCTGATCTCCACCGTCTAGATGATAGTAGCAATTCTCCCATATTGACCCAGCATTaGGCCCACTTTGGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: VISCIPDLHRLDDSSNSPILTQH*AHFGGW
Trigger: CCAGCCACCAAAGTGGGCTCAATGCTGGGTCAATAT...GGGAGAATTGCTACTATCATCTAGACGGTGGAGATCAGGGATGCAGCTAATCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380470.7
ENST00000480796.6
CDS-3UTR TCA 90 bp GTGATTAGCTGCATCCCTGATCTCCACCGTCTAGATGATAGTAGCAATTCTCCCCTGTGCACTGTAGGGTaGTTAGCTGCATCCCTGATC +
Preference number: 4 (lower is better)
Translates to: VISCIPDLHRLDDSSNSPLCTVG*LAASLI
Trigger: GATCAGGGATGCAGCTAATCACCCTACAGTGCACAG...GGGAGAATTGCTACTATCATCTAGACGGTGGAGATCAGGGATGCAGCTAATCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380470.7
ENST00000480796.6
CDS-3UTR GCA 90 bp TTCAGGTTGTTGGGGACACCCAGTGTTCTCAATCCTAGAACTGCTTACTTCAAAATTGGACTGCCTCGCTaGAGCATGGAGTGGGGTGTC +
Preference number: 4 (lower is better)
Translates to: FRLLGTPSVLNPRTAYFKIGLPR*SMEWGV
Trigger: GACACCCCACTCCATGCTGCAGCGAGGCAGTCCAAT...TTTGAAGTAAGCAGTTCTAGGATTGAGAACACTGGGTGTCCCCAACAACCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR GCA 90 bp GTGATTAGCTGCATCCCTGATCTCCACCGTCTAGATGATAGTAGCAATTCTCCCTTCACGGAGCAAGAGTaGCTGCTCCACGCTGCTTTT +
Preference number: 4 (lower is better)
Translates to: VISCIPDLHRLDDSSNSPFTEQE*LLHAAF
Trigger: AAAAGCAGCGTGGAGCAGGCACTCTTGCTCCGTGAA...GGGAGAATTGCTACTATCATCTAGACGGTGGAGATCAGGGATGCAGCTAATCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380470.7
ENST00000480796.6
CDS-3UTR GCA 90 bp CAACCTCTGGGTGCACTGATCTCTTCCAAAGTCTCTCTTATCAACCAGGACCGCACATGCCTCAGACAATaGCTGTGGGTTCAGGTTGTT +
Preference number: 4 (lower is better)
Translates to: QPLGALISSKVSLINQDRTCLRQ*LWVQVV
Trigger: AACAACCTGAACCCACAGGCATTGTCTGAGGCATGT...GCGGTCCTGGTTGATAAGAGAGACTTTGGAAGAGATCAGTGCACCCAGAGGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR GCA 90 bp GACAATGCCTGTGGGTTCAGGTTGTTGGGGACACCCAGTGTTCTCAATCCTAGAACATGCCTCAGACAATaGCTGTGGGTTCAGGTTGTT +
Preference number: 4 (lower is better)
Translates to: DNACGFRLLGTPSVLNPRTCLRQ*LWVQVV
Trigger: AACAACCTGAACCCACAGGCATTGTCTGAGGCATGT...TCTAGGATTGAGAACACTGGGTGTCCCCAACAACCTGAACCCACAGGCATTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR CCA 90 bp TTAGGTACTCTAGGTACAGCAGACAACAATCTGTGTCATTCCAAGTATCTTCCCCCTCCAACTGGGCCTTaGCTCCGAACTCCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: LGTLGTADNNLCHSKYLPPPTGP*LRTPAA
Trigger: TGCTGCTGGAGTTCGGAGCCAAGGCCCAGTTGGAGG...GGGAAGATACTTGGAATGACACAGATTGTTGTCTGCTGTACCTAGAGTACCTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR CCA 90 bp TTAGGTACTCTAGGTACAGCAGACAACAATCTGTGTCATTCCAAGTATCTTCCCTCACTGCCTCATGGATaGGCGAGGCCAGGTGCACCT +
Preference number: 4 (lower is better)
Translates to: LGTLGTADNNLCHSKYLPSLPHG*ARPGAP
Trigger: AGGTGCACCTGGCCTCGCCCATCCATGAGGCAGTGA...GGGAAGATACTTGGAATGACACAGATTGTTGTCTGCTGTACCTAGAGTACCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR CCA 90 bp GCTTTTTGGAGCCGCCAGATCAAGCGCACTTTTGCCCTGAGCATTTCTACGCTTGGCCATGGTCGACACTaGCTCCTAATTCTAGAAGTT +
Preference number: 4 (lower is better)
Translates to: AFWSRQIKRTFALSISTLGHGRH*LLILEV
Trigger: AACTTCTAGAATTAGGAGCCAGTGTCGACCATGGCC...AAGCGTAGAAATGCTCAGGGCAAAAGTGCGCTTGATCTGGCGGCTCCAAAAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485437.2
CDS-3UTR CCA 90 bp TCTGCAGACATTGACAAATGTCTCAGTGGGAGTGGGGCAAAATTGTCTCCAGTTTCCAGCCACTGGCCATaGTCGACACTGGCTCCTAAT +
Preference number: 4 (lower is better)
Translates to: SADIDKCLSGSGAKLSPVSSHWP*STLAPN
Trigger: ATTAGGAGCCAGTGTCGACCATGGCCAGTGGCTGGA...AACTGGAGACAATTTTGCCCCACTCCCACTGAGACATTTGTCAATGTCTGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380470.7
ENST00000480796.6
CDS-3UTR CCA 90 bp TTCAGGTTGTTGGGGACACCCAGTGTTCTCAATCCTAGAACTGCTTACTTCAAACTCCACGCTGCTTTTTaGAGCCGCCAGATCAAGCGC +
Preference number: 4 (lower is better)
Translates to: FRLLGTPSVLNPRTAYFKLHAAF*SRQIKR
Trigger: GCGCTTGATCTGGCGGCTCCAAAAAGCAGCGTGGAG...TTTGAAGTAAGCAGTTCTAGGATTGAGAACACTGGGTGTCCCCAACAACCTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR CCA 90 bp GACAATGCCTGTGGGTTCAGGTTGTTGGGGACACCCAGTGTTCTCAATCCTAGAATGTCTCAGTGGGAGTaGGGCAAAATTGTCTCCAGT +
Preference number: 4 (lower is better)
Translates to: DNACGFRLLGTPSVLNPRMSQWE*GKIVSS
Trigger: ACTGGAGACAATTTTGCCCCACTCCCACTGAGACAT...TCTAGGATTGAGAACACTGGGTGTCCCCAACAACCTGAACCCACAGGCATTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380470.7
ENST00000480796.6
CDS-3UTR TCA 90 bp TGCCTCAGACAATGCCTGTGGGTTCAGGTTGTTGGGGACACCCAGTGTTCTCAATTAATTGAAGCATTCTaGTGCTTCGTCCTTGGAGGT +
Preference number: 4 (lower is better)
Translates to: CLRQCLWVQVVGDTQCSQLIEAF*CFVLGG
Trigger: ACCTCCAAGGACGAAGCATCAGAATGCTTCAATTAA...TTGAGAACACTGGGTGTCCCCAACAACCTGAACCCACAGGCATTGTCTGAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344384.8
CDS-3UTR TCA 90 bp TTAGGTACTCTAGGTACAGCAGACAACAATCTGTGTCATTCCAAGTATCTTCCCAGGGGAGTTCCGAGCTaGGGCACCTCATGGTCAATG +
Preference number: 4 (lower is better)
Translates to: LGTLGTADNNLCHSKYLPRGVPS*GTSWSM
Trigger: CATTGACCATGAGGTGCCTCAGCTCGGAACTCCCCT...GGGAAGATACTTGGAATGACACAGATTGTTGTCTGCTGTACCTAGAGTACCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR TCA 90 bp TTAGGTACTCTAGGTACAGCAGACAACAATCTGTGTCATTCCAAGTATCTTCCCCGGTTAGCAGGTGGATaGCCTCCACATTGGACTGCC +
Preference number: 4 (lower is better)
Translates to: LGTLGTADNNLCHSKYLPRLAGG*PPHWTA
Trigger: GGCAGTCCAATGTGGAGGTCATCCACCTGCTAACCG...GGGAAGATACTTGGAATGACACAGATTGTTGTCTGCTGTACCTAGAGTACCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR TCA 90 bp TGCCTCAGACAATGCCTGTGGGTTCAGGTTGTTGGGGACACCCAGTGTTCTCAAAGGAGTCTAAGCTGTTaGGCTTCTACATTAGGTACT +
Preference number: 4 (lower is better)
Translates to: CLRQCLWVQVVGDTQCSQRSLSC*ASTLGT
Trigger: AGTACCTAATGTAGAAGCTCAACAGCTTAGACTCCT...TTGAGAACACTGGGTGTCCCCAACAACCTGAACCCACAGGCATTGTCTGAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR TCA 90 bp TCTGCAGACATTGACAAATGTCTCAGTGGGAGTGGGGCAAAATTGTCTCCAGTTCTGTGCACTGTAGGGTaGTTAGCTGCATCCCTGATC +
Preference number: 4 (lower is better)
Translates to: SADIDKCLSGSGAKLSPVLCTVG*LAASLI
Trigger: GATCAGGGATGCAGCTAATCACCCTACAGTGCACAG...AACTGGAGACAATTTTGCCCCACTCCCACTGAGACATTTGTCAATGTCTGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380470.7
ENST00000480796.6
CDS-3UTR GCA 90 bp TTCTACATTAGGTACTCTAGGTACAGCAGACAACAATCTGTGTCATTCCAAGTAATGGGCGAGGCCAGGTaGACCTCCAACTGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: FYIRYSRYSRQQSVSFQVMGEAR*TSNWAL
Trigger: CAAGGCCCAGTTGGAGGTGCACCTGGCCTCGCCCAT...TACTTGGAATGACACAGATTGTTGTCTGCTGTACCTAGAGTACCTAATGTAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR GCA 90 bp TTAGGTACTCTAGGTACAGCAGACAACAATCTGTGTCATTCCAAGTATCTTCCCGTGACCTCTCTTCACTaGCTCATGGATGGGCGAGGC +
Preference number: 4 (lower is better)
Translates to: LGTLGTADNNLCHSKYLPVTSLH*LMDGRG
Trigger: GCCTCGCCCATCCATGAGGCAGTGAAGAGAGGTCAC...GGGAAGATACTTGGAATGACACAGATTGTTGTCTGCTGTACCTAGAGTACCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR GCA 90 bp CAGTGCTTGGGTTGCAACATGCCTCAGACAATGCCTGTGGGTTCAGGTTGTTGGTTGAAAATAAGCCAGTaGTTGGGTTGCAACATGCCT +
Preference number: 4 (lower is better)
Translates to: QCLGCNMPQTMPVGSGCWLKISQ*LGCNMP
Trigger: AGGCATGTTGCAACCCAAGCACTGGCTTATTTTCAA...CCAACAACCTGAACCCACAGGCATTGTCTGAGGCATGTTGCAACCCAAGCACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR GCA 90 bp GGAGGAATCGTTCGAGTGGCTCTGGCAGATGTAGCTTGTGGATGGCTTGATGACACCATAGATCTCTTCTaGTATCCTAGCCGCTTCTTT +
Preference number: 4 (lower is better)
Translates to: GGIVRVALADVACGWLDDTIDLF*YPSRFF
Trigger: AAAGAAGCGGCTAGGATAGCAGAAGAGATCTATGGT...GTCATCAAGCCATCCACAAGCTACATCTGCCAGAGCCACTCGAACGATTCCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485437.2
CDS-3UTR CCA 90 bp TCTGCAGACATTGACAAATGTCTCAGTGGGAGTGGGGCAAAATTGTCTCCAGTTTGCAGCTTCATGAAGTaGGGATCGATCAGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: SADIDKCLSGSGAKLSPVCSFMK*GSISPA
Trigger: TGCTGGGCTGATCGATCCCCACTTCATGAAGCTGCA...AACTGGAGACAATTTTGCCCCACTCCCACTGAGACATTTGTCAATGTCTGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380470.7
ENST00000480796.6
CDS-3UTR CCA 90 bp TTCAGGTTGTTGGGGACACCCAGTGTTCTCAATCCTAGAACTGCTTACTTCAAACCAAGGCATGCCTCGTaGAGAGAAGACACCCGGTTA +
Preference number: 4 (lower is better)
Translates to: FRLLGTPSVLNPRTAYFKPRHAS*REDTRL
Trigger: TAACCGGGTGTCTTCTCTCCACGAGGCATGCCTTGG...TTTGAAGTAAGCAGTTCTAGGATTGAGAACACTGGGTGTCCCCAACAACCTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344384.8
ENST00000480796.6
CDS-3UTR CCA 90 bp TCTACATTAGGTACTCTAGGTACAGCAGACAACAATCTGTGTCATTCCAAGTATGGGGTGTCCAGCCACTaGCCATGGTCGACACTGGCT +
Preference number: 4 (lower is better)
Translates to: STLGTLGTADNNLCHSKYGVSSH*PWSTLA
Trigger: AGCCAGTGTCGACCATGGCCAGTGGCTGGACACCCC...ATACTTGGAATGACACAGATTGTTGTCTGCTGTACCTAGAGTACCTAATGTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR CCA 90 bp TGCCTCAGACAATGCCTGTGGGTTCAGGTTGTTGGGGACACCCAGTGTTCTCAAGCCCACTTTGGTGGCTaGCATCAGTATGTAATTATT +
Preference number: 4 (lower is better)
Translates to: CLRQCLWVQVVGDTQCSQAHFGG*HQYVII
Trigger: AATAATTACATACTGATGCCAGCCACCAAAGTGGGC...TTGAGAACACTGGGTGTCCCCAACAACCTGAACCCACAGGCATTGTCTGAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR TCA 90 bp TTGCTGGCTCCTGTGCACTGTAGGGTGATTAGCTGCATCCCTGATCTCCACCGTGGGATTTACTTCGACTaGGCTCATTTAAAGATACTA +
Preference number: 4 (lower is better)
Translates to: LLAPVHCRVISCIPDLHRGIYFD*AHLKIL
Trigger: TAGTATCTTTAAATGAGCTCAGTCGAAGTAAATCCC...ACGGTGGAGATCAGGGATGCAGCTAATCACCCTACAGTGCACAGGAGCCAGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380470.7
ENST00000480796.6
CDS-3UTR GCA 90 bp TTAGGTACTCTAGGTACAGCAGACAACAATCTGTGTCATTCCAAGTATCTTCCCCAGCACATTGACACATaGAGCACTGCCGCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: LGTLGTADNNLCHSKYLPQHIDT*STAAAA
Trigger: TGCTGCAGCGGCAGTGCTGCATGTGTCAATGTGCTG...GGGAAGATACTTGGAATGACACAGATTGTTGTCTGCTGTACCTAGAGTACCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR GCA 90 bp TTCAGGTTGTTGGGGACACCCAGTGTTCTCAATCCTAGAACTGCTTACTTCAAACCAGCAGGATCTCCATaGACTCTCTGTGACCTCTCT +
Preference number: 4 (lower is better)
Translates to: FRLLGTPSVLNPRTAYFKPAGSP*TLCDLS
Trigger: AGAGAGGTCACAGAGAGTGCATGGAGATCCTGCTGG...TTTGAAGTAAGCAGTTCTAGGATTGAGAACACTGGGTGTCCCCAACAACCTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR GCA 90 bp GACAATGCCTGTGGGTTCAGGTTGTTGGGGACACCCAGTGTTCTCAATCCTAGACTGATAATTCTTTGTTaGTGGCTCCTGTGCACTGTA +
Preference number: 4 (lower is better)
Translates to: DNACGFRLLGTPSVLNPRLIILC*WLLCTV
Trigger: TACAGTGCACAGGAGCCAGCAACAAAGAATTATCAG...TCTAGGATTGAGAACACTGGGTGTCCCCAACAACCTGAACCCACAGGCATTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380470.7
ENST00000480796.6
CDS-3UTR CCA 90 bp TTCAGGTTGTTGGGGACACCCAGTGTTCTCAATCCTAGAACTGCTTACTTCAAATGCAGCTTCATGAAGTaGGGATCGATCAGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: FRLLGTPSVLNPRTAYFKCSFMK*GSISPA
Trigger: TGCTGGGCTGATCGATCCCCACTTCATGAAGCTGCA...TTTGAAGTAAGCAGTTCTAGGATTGAGAACACTGGGTGTCCCCAACAACCTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR CCA 90 bp TTCTACATTAGGTACTCTAGGTACAGCAGACAACAATCTGTGTCATTCCAAGTAAGGTGCACCTCCAACTaGGCCTTGGCTCCGAACTCC +
Preference number: 4 (lower is better)
Translates to: FYIRYSRYSRQQSVSFQVRCTSN*ALAPNS
Trigger: GGAGTTCGGAGCCAAGGCCCAGTTGGAGGTGCACCT...TACTTGGAATGACACAGATTGTTGTCTGCTGTACCTAGAGTACCTAATGTAGAA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR CCA 90 bp GGCTGGCATCAGTATGTAATTATTTCAAAAACCCTGAGCATCTTGACTTTGAAATGCCTCGCTGCAGCATaGAGTGGGGTGTCCAGCCAC +
Preference number: 4 (lower is better)
Translates to: GWHQYVIISKTLSILTLKCLAAA*SGVSSH
Trigger: GTGGCTGGACACCCCACTCCATGCTGCAGCGAGGCA...TTTCAAAGTCAAGATGCTCAGGGTTTTTGAAATAATTACATACTGATGCCAGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR CCA 90 bp GACAATGCCTGTGGGTTCAGGTTGTTGGGGACACCCAGTGTTCTCAATCCTAGACCTTTGTGCTTATTTTaGGCCCCTATCCACAGAAAA +
Preference number: 4 (lower is better)
Translates to: DNACGFRLLGTPSVLNPRPLCLF*APIHRK
Trigger: TTTTCTGTGGATAGGGGCCCAAAATAAGCACAAAGG...TCTAGGATTGAGAACACTGGGTGTCCCCAACAACCTGAACCCACAGGCATTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR TCA 90 bp TCTACATTAGGTACTCTAGGTACAGCAGACAACAATCTGTGTCATTCCAAGTATACTCCAGCAGCACATTaGCACATGCAGCACTGCCGC +
Preference number: 4 (lower is better)
Translates to: STLGTLGTADNNLCHSKYTPAAH*HMQHCR
Trigger: GCGGCAGTGCTGCATGTGTCAATGTGCTGCTGGAGT...ATACTTGGAATGACACAGATTGTTGTCTGCTGTACCTAGAGTACCTAATGTAGA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR TCA 90 bp TTAGGTACTCTAGGTACAGCAGACAACAATCTGTGTCATTCCAAGTATCTTCCCTCCATGCACTCTCTGTaGCCTCTCTTCACTGCCTCA +
Preference number: 4 (lower is better)
Translates to: LGTLGTADNNLCHSKYLPSMHSL*PLFTAS
Trigger: TGAGGCAGTGAAGAGAGGTCACAGAGAGTGCATGGA...GGGAAGATACTTGGAATGACACAGATTGTTGTCTGCTGTACCTAGAGTACCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR GCA 90 bp TTCTACATTAGGTACTCTAGGTACAGCAGACAACAATCTGTGTCATTCCAAGTAATTGGACTGCCTCGCTaGAGCATGGAGTGGGGTGTC +
Preference number: 4 (lower is better)
Translates to: FYIRYSRYSRQQSVSFQVIGLPR*SMEWGV
Trigger: GACACCCCACTCCATGCTGCAGCGAGGCAGTCCAAT...TACTTGGAATGACACAGATTGTTGTCTGCTGTACCTAGAGTACCTAATGTAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR GCA 90 bp TTCTACATTAGGTACTCTAGGTACAGCAGACAACAATCTGTGTCATTCCAAGTAGTGCCTGCTCCACGCTaGTTTTTGGAGCCGCCAGAT +
Preference number: 4 (lower is better)
Translates to: FYIRYSRYSRQQSVSFQVVPAPR*FLEPPD
Trigger: ATCTGGCGGCTCCAAAAAGCAGCGTGGAGCAGGCAC...TACTTGGAATGACACAGATTGTTGTCTGCTGTACCTAGAGTACCTAATGTAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR GCA 90 bp TCTACATTAGGTACTCTAGGTACAGCAGACAACAATCTGTGTCATTCCAAGTATGTGCCTGCTCCACGCTaGTTTTTGGAGCCGCCAGAT +
Preference number: 4 (lower is better)
Translates to: STLGTLGTADNNLCHSKYVPAPR*FLEPPD
Trigger: ATCTGGCGGCTCCAAAAAGCAGCGTGGAGCAGGCAC...ATACTTGGAATGACACAGATTGTTGTCTGCTGTACCTAGAGTACCTAATGTAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR GCA 90 bp TTAGGTACTCTAGGTACAGCAGACAACAATCTGTGTCATTCCAAGTATCTTCCCTTCACGGAGCAAGAGTaGCTGCTCCACGCTGCTTTT +
Preference number: 4 (lower is better)
Translates to: LGTLGTADNNLCHSKYLPFTEQE*LLHAAF
Trigger: AAAAGCAGCGTGGAGCAGGCACTCTTGCTCCGTGAA...GGGAAGATACTTGGAATGACACAGATTGTTGTCTGCTGTACCTAGAGTACCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR CCA 90 bp GACAATGCCTGTGGGTTCAGGTTGTTGGGGACACCCAGTGTTCTCAATCCTAGACTGATGCTTCGTCCTTaGAGGTCTTATTTCTTTAGA +
Preference number: 4 (lower is better)
Translates to: DNACGFRLLGTPSVLNPRLMLRP*RSYFFR
Trigger: TCTAAAGAAATAAGACCTCCAAGGACGAAGCATCAG...TCTAGGATTGAGAACACTGGGTGTCCCCAACAACCTGAACCCACAGGCATTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344384.8
CDS-3UTR CCA 90 bp GGCTGGCATCAGTATGTAATTATTTCAAAAACCCTGAGCATCTTGACTTTGAAAAGGTGCACCTCCAACTaGGCCTTGGCTCCGAACTCC +
Preference number: 4 (lower is better)
Translates to: GWHQYVIISKTLSILTLKRCTSN*ALAPNS
Trigger: GGAGTTCGGAGCCAAGGCCCAGTTGGAGGTGCACCT...TTTCAAAGTCAAGATGCTCAGGGTTTTTGAAATAATTACATACTGATGCCAGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR CCA 90 bp GGCTGGCATCAGTATGTAATTATTTCAAAAACCCTGAGCATCTTGACTTTGAAACTCTTCACTGCCTCATaGATGGGCGAGGCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: GWHQYVIISKTLSILTLKLFTAS*MGEARC
Trigger: GCACCTGGCCTCGCCCATCCATGAGGCAGTGAAGAG...TTTCAAAGTCAAGATGCTCAGGGTTTTTGAAATAATTACATACTGATGCCAGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR CCA 90 bp TCTACATTAGGTACTCTAGGTACAGCAGACAACAATCTGTGTCATTCCAAGTATCTGGGAAAGAGCAGGTaGGCCTTCACGGAGCAAGAG +
Preference number: 4 (lower is better)
Translates to: STLGTLGTADNNLCHSKYLGKSR*AFTEQE
Trigger: CTCTTGCTCCGTGAAGGCCCACCTGCTCTTTCCCAG...ATACTTGGAATGACACAGATTGTTGTCTGCTGTACCTAGAGTACCTAATGTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR CCA 90 bp TCTGCAGACATTGACAAATGTCTCAGTGGGAGTGGGGCAAAATTGTCTCCAGTTGATGTAGCTTGTGGATaGCTTGATGACATGCTCGAC +
Preference number: 4 (lower is better)
Translates to: SADIDKCLSGSGAKLSPVDVACG*LDDMLD
Trigger: GTCGAGCATGTCATCAAGCCATCCACAAGCTACATC...AACTGGAGACAATTTTGCCCCACTCCCACTGAGACATTTGTCAATGTCTGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380470.7
ENST00000480796.6
CDS-3UTR CCA 90 bp TTAGGTACTCTAGGTACAGCAGACAACAATCTGTGTCATTCCAAGTATCTTCCCGTGGGTTCAGGTTGTTaGGGACACCCAGTGTTCTCA +
Preference number: 4 (lower is better)
Translates to: LGTLGTADNNLCHSKYLPVGSGC*GHPVFS
Trigger: TGAGAACACTGGGTGTCCCCAACAACCTGAACCCAC...GGGAAGATACTTGGAATGACACAGATTGTTGTCTGCTGTACCTAGAGTACCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR CCA 90 bp TTAGGTACTCTAGGTACAGCAGACAACAATCTGTGTCATTCCAAGTATCTTCCCCTCAGACAATGCCTGTaGGTTCAGGTTGTTGGGGAC +
Preference number: 4 (lower is better)
Translates to: LGTLGTADNNLCHSKYLPLRQCL*VQVVGD
Trigger: GTCCCCAACAACCTGAACCCACAGGCATTGTCTGAG...GGGAAGATACTTGGAATGACACAGATTGTTGTCTGCTGTACCTAGAGTACCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR CCA 90 bp TTCAGGTTGTTGGGGACACCCAGTGTTCTCAATCCTAGAACTGCTTACTTCAAAGCATTGAGCCCACTTTaGTGGCTGGCATCAGTATGT +
Preference number: 4 (lower is better)
Translates to: FRLLGTPSVLNPRTAYFKALSPL*WLASVC
Trigger: ACATACTGATGCCAGCCACCAAAGTGGGCTCAATGC...TTTGAAGTAAGCAGTTCTAGGATTGAGAACACTGGGTGTCCCCAACAACCTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR GCA 90 bp TTCTACATTAGGTACTCTAGGTACAGCAGACAACAATCTGTGTCATTCCAAGTACAGCACATTGACACATaGAGCACTGCCGCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: FYIRYSRYSRQQSVSFQVQHIDT*STAAAA
Trigger: TGCTGCAGCGGCAGTGCTGCATGTGTCAATGTGCTG...TACTTGGAATGACACAGATTGTTGTCTGCTGTACCTAGAGTACCTAATGTAGAA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR GCA 90 bp GGCTGGCATCAGTATGTAATTATTTCAAAAACCCTGAGCATCTTGACTTTGAAAATTGGACTGCCTCGCTaGAGCATGGAGTGGGGTGTC +
Preference number: 4 (lower is better)
Translates to: GWHQYVIISKTLSILTLKIGLPR*SMEWGV
Trigger: GACACCCCACTCCATGCTGCAGCGAGGCAGTCCAAT...TTTCAAAGTCAAGATGCTCAGGGTTTTTGAAATAATTACATACTGATGCCAGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR GCA 90 bp TTCTACATTAGGTACTCTAGGTACAGCAGACAACAATCTGTGTCATTCCAAGTAACCTCCACATTGGACTaGCTCGCTGCAGCATGGAGT +
Preference number: 4 (lower is better)
Translates to: FYIRYSRYSRQQSVSFQVTSTLD*LAAAWS
Trigger: ACTCCATGCTGCAGCGAGGCAGTCCAATGTGGAGGT...TACTTGGAATGACACAGATTGTTGTCTGCTGTACCTAGAGTACCTAATGTAGAA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR GCA 90 bp TTCAGGTTGTTGGGGACACCCAGTGTTCTCAATCCTAGAACTGCTTACTTCAAAGATCAAGCGCACTTTTaGCCTGAGCATTTCTACGCT +
Preference number: 4 (lower is better)
Translates to: FRLLGTPSVLNPRTAYFKDQAHF*PEHFYA
Trigger: AGCGTAGAAATGCTCAGGGCAAAAGTGCGCTTGATC...TTTGAAGTAAGCAGTTCTAGGATTGAGAACACTGGGTGTCCCCAACAACCTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR CCA 90 bp TCTACATTAGGTACTCTAGGTACAGCAGACAACAATCTGTGTCATTCCAAGTATCCAAGGCATGCCTCGTaGAGAGAAGACACCCGGTTA +
Preference number: 4 (lower is better)
Translates to: STLGTLGTADNNLCHSKYPRHAS*REDTRL
Trigger: TAACCGGGTGTCTTCTCTCCACGAGGCATGCCTTGG...ATACTTGGAATGACACAGATTGTTGTCTGCTGTACCTAGAGTACCTAATGTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344384.8
ENST00000480796.6
CDS-3UTR CCA 90 bp TTAGGTACTCTAGGTACAGCAGACAACAATCTGTGTCATTCCAAGTATCTTCCCTTTCCAATAAGGCTTTaGCACAGGCCACGTGACCTC +
Preference number: 4 (lower is better)
Translates to: LGTLGTADNNLCHSKYLPFPIRL*HRPRDL
Trigger: GAGGTCACGTGGCCTGTGCCAAAGCCTTATTGGAAA...GGGAAGATACTTGGAATGACACAGATTGTTGTCTGCTGTACCTAGAGTACCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR CCA 90 bp TTCAGGTTGTTGGGGACACCCAGTGTTCTCAATCCTAGAACTGCTTACTTCAAAGGCCATGGTCGACACTaGCTCCTAATTCTAGAAGTT +
Preference number: 4 (lower is better)
Translates to: FRLLGTPSVLNPRTAYFKGHGRH*LLILEV
Trigger: AACTTCTAGAATTAGGAGCCAGTGTCGACCATGGCC...TTTGAAGTAAGCAGTTCTAGGATTGAGAACACTGGGTGTCCCCAACAACCTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR CCA 90 bp TCTGCAGACATTGACAAATGTCTCAGTGGGAGTGGGGCAAAATTGTCTCCAGTTTTGAGCCCACTTTGGTaGCTGGCATCAGTATGTAAT +
Preference number: 4 (lower is better)
Translates to: SADIDKCLSGSGAKLSPVLSPLW*LASVCN
Trigger: ATTACATACTGATGCCAGCCACCAAAGTGGGCTCAA...AACTGGAGACAATTTTGCCCCACTCCCACTGAGACATTTGTCAATGTCTGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000380470.7
ENST00000480796.6
CDS-3UTR TCA 90 bp TCTACATTAGGTACTCTAGGTACAGCAGACAACAATCTGTGTCATTCCAAGTATATATTGACCCAGCATTaGGCCCACTTTGGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: STLGTLGTADNNLCHSKYILTQH*AHFGGW
Trigger: CCAGCCACCAAAGTGGGCTCAATGCTGGGTCAATAT...ATACTTGGAATGACACAGATTGTTGTCTGCTGTACCTAGAGTACCTAATGTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR TCA 90 bp TTCTACATTAGGTACTCTAGGTACAGCAGACAACAATCTGTGTCATTCCAAGTATGGAGTGCAGTGGCGTaGTCTTGGCTTACTGCAATC +
Preference number: 4 (lower is better)
Translates to: FYIRYSRYSRQQSVSFQVWSAVA*SWLTAI
Trigger: GATTGCAGTAAGCCAAGATCACGCCACTGCACTCCA...TACTTGGAATGACACAGATTGTTGTCTGCTGTACCTAGAGTACCTAATGTAGAA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380470.7
ENST00000480796.6
CDS-3UTR GCA 90 bp GGCTGGCATCAGTATGTAATTATTTCAAAAACCCTGAGCATCTTGACTTTGAAAACCTCCACATTGGACTaGCTCGCTGCAGCATGGAGT +
Preference number: 4 (lower is better)
Translates to: GWHQYVIISKTLSILTLKTSTLD*LAAAWS
Trigger: ACTCCATGCTGCAGCGAGGCAGTCCAATGTGGAGGT...TTTCAAAGTCAAGATGCTCAGGGTTTTTGAAATAATTACATACTGATGCCAGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR GCA 90 bp TTAGGTACTCTAGGTACAGCAGACAACAATCTGTGTCATTCCAAGTATCTTCCCGATCAAGCGCACTTTTaGCCTGAGCATTTCTACGCT +
Preference number: 4 (lower is better)
Translates to: LGTLGTADNNLCHSKYLPDQAHF*PEHFYA
Trigger: AGCGTAGAAATGCTCAGGGCAAAAGTGCGCTTGATC...GGGAAGATACTTGGAATGACACAGATTGTTGTCTGCTGTACCTAGAGTACCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR GCA 90 bp GGCTGGCATCAGTATGTAATTATTTCAAAAACCCTGAGCATCTTGACTTTGAAACGGAGCAAGAGTGCCTaGTCCACGCTGCTTTTTGGA +
Preference number: 4 (lower is better)
Translates to: GWHQYVIISKTLSILTLKRSKSA*STLLFG
Trigger: TCCAAAAAGCAGCGTGGAGCAGGCACTCTTGCTCCG...TTTCAAAGTCAAGATGCTCAGGGTTTTTGAAATAATTACATACTGATGCCAGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR GCA 90 bp TTCTACATTAGGTACTCTAGGTACAGCAGACAACAATCTGTGTCATTCCAAGTAGATGGCTTGATGACATaGTCGACCGAGACACTTCCG +
Preference number: 4 (lower is better)
Translates to: FYIRYSRYSRQQSVSFQVDGLMT*STETLP
Trigger: CGGAAGTGTCTCGGTCGAGCATGTCATCAAGCCATC...TACTTGGAATGACACAGATTGTTGTCTGCTGTACCTAGAGTACCTAATGTAGAA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR GCA 90 bp TTAGGTACTCTAGGTACAGCAGACAACAATCTGTGTCATTCCAAGTATCTTCCCGCAATAAGCAATAGATaGCAACCTCTGGGTGCACTG +
Preference number: 4 (lower is better)
Translates to: LGTLGTADNNLCHSKYLPAISNR*QPLGAL
Trigger: CAGTGCACCCAGAGGTTGGCATCTATTGCTTATTGC...GGGAAGATACTTGGAATGACACAGATTGTTGTCTGCTGTACCTAGAGTACCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR GCA 90 bp TTCTACATTAGGTACTCTAGGTACAGCAGACAACAATCTGTGTCATTCCAAGTAGCTTGGGTTGCAACATaGCTCAGACAATGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: FYIRYSRYSRQQSVSFQVAWVAT*LRQCLW
Trigger: CCACAGGCATTGTCTGAGGCATGTTGCAACCCAAGC...TACTTGGAATGACACAGATTGTTGTCTGCTGTACCTAGAGTACCTAATGTAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR GCA 90 bp TCTACATTAGGTACTCTAGGTACAGCAGACAACAATCTGTGTCATTCCAAGTATGCTTGGGTTGCAACATaGCTCAGACAATGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: STLGTLGTADNNLCHSKYAWVAT*LRQCLW
Trigger: CCACAGGCATTGTCTGAGGCATGTTGCAACCCAAGC...ATACTTGGAATGACACAGATTGTTGTCTGCTGTACCTAGAGTACCTAATGTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR GCA 90 bp TCTGCAGACATTGACAAATGTCTCAGTGGGAGTGGGGCAAAATTGTCTCCAGTTCTGATAATTCTTTGTTaGTGGCTCCTGTGCACTGTA +
Preference number: 4 (lower is better)
Translates to: SADIDKCLSGSGAKLSPVLIILC*WLLCTV
Trigger: TACAGTGCACAGGAGCCAGCAACAAAGAATTATCAG...AACTGGAGACAATTTTGCCCCACTCCCACTGAGACATTTGTCAATGTCTGCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380470.7
ENST00000480796.6
CDS-3UTR CCA 90 bp TTCAGGTTGTTGGGGACACCCAGTGTTCTCAATCCTAGAACTGCTTACTTCAAAAGAAATCTCTTTCCATaGTCCGGACCTTCTGATACG +
Preference number: 4 (lower is better)
Translates to: FRLLGTPSVLNPRTAYFKRNLFP*SGPSDT
Trigger: CGTATCAGAAGGTCCGGACCATGGAAAGAGATTTCT...TTTGAAGTAAGCAGTTCTAGGATTGAGAACACTGGGTGTCCCCAACAACCTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344384.8
CDS-3UTR CCA 90 bp TTCTACATTAGGTACTCTAGGTACAGCAGACAACAATCTGTGTCATTCCAAGTATGCAGCTTCATGAAGTaGGGATCGATCAGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: FYIRYSRYSRQQSVSFQVCSFMK*GSISPA
Trigger: TGCTGGGCTGATCGATCCCCACTTCATGAAGCTGCA...TACTTGGAATGACACAGATTGTTGTCTGCTGTACCTAGAGTACCTAATGTAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR CCA 90 bp TTAGGTACTCTAGGTACAGCAGACAACAATCTGTGTCATTCCAAGTATCTTCCCCAGGACCGCAGTAACTaGAAGCCTCAGTTAACTACA +
Preference number: 4 (lower is better)
Translates to: LGTLGTADNNLCHSKYLPQDRSN*KPQLTT
Trigger: TGTAGTTAACTGAGGCTTCCAGTTACTGCGGTCCTG...GGGAAGATACTTGGAATGACACAGATTGTTGTCTGCTGTACCTAGAGTACCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR CCA 90 bp TTCTACATTAGGTACTCTAGGTACAGCAGACAACAATCTGTGTCATTCCAAGTAGTGGGTTCAGGTTGTTaGGGACACCCAGTGTTCTCA +
Preference number: 4 (lower is better)
Translates to: FYIRYSRYSRQQSVSFQVVGSGC*GHPVFS
Trigger: TGAGAACACTGGGTGTCCCCAACAACCTGAACCCAC...TACTTGGAATGACACAGATTGTTGTCTGCTGTACCTAGAGTACCTAATGTAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR CCA 90 bp TTCTACATTAGGTACTCTAGGTACAGCAGACAACAATCTGTGTCATTCCAAGTACTCAGACAATGCCTGTaGGTTCAGGTTGTTGGGGAC +
Preference number: 4 (lower is better)
Translates to: FYIRYSRYSRQQSVSFQVLRQCL*VQVVGD
Trigger: GTCCCCAACAACCTGAACCCACAGGCATTGTCTGAG...TACTTGGAATGACACAGATTGTTGTCTGCTGTACCTAGAGTACCTAATGTAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR CCA 90 bp TCTGCAGACATTGACAAATGTCTCAGTGGGAGTGGGGCAAAATTGTCTCCAGTTGACCATCTTCCATTTTaGCTTATGCTCTGTATAGGG +
Preference number: 4 (lower is better)
Translates to: SADIDKCLSGSGAKLSPVDHLPF*LMLCIG
Trigger: CCCTATACAGAGCATAAGCCAAAATGGAAGATGGTC...AACTGGAGACAATTTTGCCCCACTCCCACTGAGACATTTGTCAATGTCTGCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000480796.6
CDS-3UTR TCA 90 bp TTCTACATTAGGTACTCTAGGTACAGCAGACAACAATCTGTGTCATTCCAAGTAAACCTCTGGGTGCACTaGTCTCTTCCAAAGTCTCTC +
Preference number: 4 (lower is better)
Translates to: FYIRYSRYSRQQSVSFQVNLWVH*SLPKSL
Trigger: GAGAGACTTTGGAAGAGATCAGTGCACCCAGAGGTT...TACTTGGAATGACACAGATTGTTGTCTGCTGTACCTAGAGTACCTAATGTAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR GCA 90 bp TCTACATTAGGTACTCTAGGTACAGCAGACAACAATCTGTGTCATTCCAAGTATAGCCAGTGCTTGGGTTaGAACATGCCTCAGACAATG +
Preference number: 4 (lower is better)
Translates to: STLGTLGTADNNLCHSKYSQCLG*NMPQTM
Trigger: CATTGTCTGAGGCATGTTGCAACCCAAGCACTGGCT...ATACTTGGAATGACACAGATTGTTGTCTGCTGTACCTAGAGTACCTAATGTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR GCA 90 bp TTCAGGTTGTTGGGGACACCCAGTGTTCTCAATCCTAGAACTGCTTACTTCAAATTGAAAATAAGCCAGTaGTTGGGTTGCAACATGCCT +
Preference number: 4 (lower is better)
Translates to: FRLLGTPSVLNPRTAYFKLKISQ*LGCNMP
Trigger: AGGCATGTTGCAACCCAAGCACTGGCTTATTTTCAA...TTTGAAGTAAGCAGTTCTAGGATTGAGAACACTGGGTGTCCCCAACAACCTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR TCA 90 bp GGCTGGCATCAGTATGTAATTATTTCAAAAACCCTGAGCATCTTGACTTTGAAAAACCTCTGGGTGCACTaGTCTCTTCCAAAGTCTCTC +
Preference number: 4 (lower is better)
Translates to: GWHQYVIISKTLSILTLKNLWVH*SLPKSL
Trigger: GAGAGACTTTGGAAGAGATCAGTGCACCCAGAGGTT...TTTCAAAGTCAAGATGCTCAGGGTTTTTGAAATAATTACATACTGATGCCAGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR GCA 90 bp TTCTACATTAGGTACTCTAGGTACAGCAGACAACAATCTGTGTCATTCCAAGTAGATCAAGCGCACTTTTaGCCTGAGCATTTCTACGCT +
Preference number: 4 (lower is better)
Translates to: FYIRYSRYSRQQSVSFQVDQAHF*PEHFYA
Trigger: AGCGTAGAAATGCTCAGGGCAAAAGTGCGCTTGATC...TACTTGGAATGACACAGATTGTTGTCTGCTGTACCTAGAGTACCTAATGTAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR GCA 90 bp TTCTACATTAGGTACTCTAGGTACAGCAGACAACAATCTGTGTCATTCCAAGTAGCAATAAGCAATAGATaGCAACCTCTGGGTGCACTG +
Preference number: 4 (lower is better)
Translates to: FYIRYSRYSRQQSVSFQVAISNR*QPLGAL
Trigger: CAGTGCACCCAGAGGTTGGCATCTATTGCTTATTGC...TACTTGGAATGACACAGATTGTTGTCTGCTGTACCTAGAGTACCTAATGTAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR GCA 90 bp TCTACATTAGGTACTCTAGGTACAGCAGACAACAATCTGTGTCATTCCAAGTATGCAATAAGCAATAGATaGCAACCTCTGGGTGCACTG +
Preference number: 4 (lower is better)
Translates to: STLGTLGTADNNLCHSKYAISNR*QPLGAL
Trigger: CAGTGCACCCAGAGGTTGGCATCTATTGCTTATTGC...ATACTTGGAATGACACAGATTGTTGTCTGCTGTACCTAGAGTACCTAATGTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR GCA 90 bp TCTACATTAGGTACTCTAGGTACAGCAGACAACAATCTGTGTCATTCCAAGTATACATGCCTCAGACAATaGCTGTGGGTTCAGGTTGTT +
Preference number: 4 (lower is better)
Translates to: STLGTLGTADNNLCHSKYTCLRQ*LWVQVV
Trigger: AACAACCTGAACCCACAGGCATTGTCTGAGGCATGT...ATACTTGGAATGACACAGATTGTTGTCTGCTGTACCTAGAGTACCTAATGTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR GCA 90 bp TTAGGTACTCTAGGTACAGCAGACAACAATCTGTGTCATTCCAAGTATCTTCCCACCATAGATCTCTTCTaGTATCCTAGCCGCTTCTTT +
Preference number: 4 (lower is better)
Translates to: LGTLGTADNNLCHSKYLPTIDLF*YPSRFF
Trigger: AAAGAAGCGGCTAGGATAGCAGAAGAGATCTATGGT...GGGAAGATACTTGGAATGACACAGATTGTTGTCTGCTGTACCTAGAGTACCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380470.7
ENST00000480796.6
CDS-3UTR CCA 90 bp TCTACATTAGGTACTCTAGGTACAGCAGACAACAATCTGTGTCATTCCAAGTATCAGGACCGCAGTAACTaGAAGCCTCAGTTAACTACA +
Preference number: 4 (lower is better)
Translates to: STLGTLGTADNNLCHSKYQDRSN*KPQLTT
Trigger: TGTAGTTAACTGAGGCTTCCAGTTACTGCGGTCCTG...ATACTTGGAATGACACAGATTGTTGTCTGCTGTACCTAGAGTACCTAATGTAGA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR CCA 90 bp TTAGGTACTCTAGGTACAGCAGACAACAATCTGTGTCATTCCAAGTATCTTCCCGCCCACTTTGGTGGCTaGCATCAGTATGTAATTATT +
Preference number: 4 (lower is better)
Translates to: LGTLGTADNNLCHSKYLPAHFGG*HQYVII
Trigger: AATAATTACATACTGATGCCAGCCACCAAAGTGGGC...GGGAAGATACTTGGAATGACACAGATTGTTGTCTGCTGTACCTAGAGTACCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR TCA 90 bp TTCAGGTTGTTGGGGACACCCAGTGTTCTCAATCCTAGAACTGCTTACTTCAAAGGGATTTACTTCGACTaGGCTCATTTAAAGATACTA +
Preference number: 4 (lower is better)
Translates to: FRLLGTPSVLNPRTAYFKGIYFD*AHLKIL
Trigger: TAGTATCTTTAAATGAGCTCAGTCGAAGTAAATCCC...TTTGAAGTAAGCAGTTCTAGGATTGAGAACACTGGGTGTCCCCAACAACCTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR CCA 90 bp GGCTGGCATCAGTATGTAATTATTTCAAAAACCCTGAGCATCTTGACTTTGAAAATGTCTCAGTGGGAGTaGGGCAAAATTGTCTCCAGT +
Preference number: 4 (lower is better)
Translates to: GWHQYVIISKTLSILTLKMSQWE*GKIVSS
Trigger: ACTGGAGACAATTTTGCCCCACTCCCACTGAGACAT...TTTCAAAGTCAAGATGCTCAGGGTTTTTGAAATAATTACATACTGATGCCAGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000380470.7
ENST00000480796.6
CDS-3UTR TCA 90 bp TCTACATTAGGTACTCTAGGTACAGCAGACAACAATCTGTGTCATTCCAAGTATAGGAGTCTAAGCTGTTaGGCTTCTACATTAGGTACT +
Preference number: 4 (lower is better)
Translates to: STLGTLGTADNNLCHSKYRSLSC*ASTLGT
Trigger: AGTACCTAATGTAGAAGCTCAACAGCTTAGACTCCT...ATACTTGGAATGACACAGATTGTTGTCTGCTGTACCTAGAGTACCTAATGTAGA
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR GCA 90 bp TCTACATTAGGTACTCTAGGTACAGCAGACAACAATCTGTGTCATTCCAAGTATTTGAAAATAAGCCAGTaGTTGGGTTGCAACATGCCT +
Preference number: 4 (lower is better)
Translates to: STLGTLGTADNNLCHSKYLKISQ*LGCNMP
Trigger: AGGCATGTTGCAACCCAAGCACTGGCTTATTTTCAA...ATACTTGGAATGACACAGATTGTTGTCTGCTGTACCTAGAGTACCTAATGTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR GCA 90 bp TTCTACATTAGGTACTCTAGGTACAGCAGACAACAATCTGTGTCATTCCAAGTAACCATAGATCTCTTCTaGTATCCTAGCCGCTTCTTT +
Preference number: 4 (lower is better)
Translates to: FYIRYSRYSRQQSVSFQVTIDLF*YPSRFF
Trigger: AAAGAAGCGGCTAGGATAGCAGAAGAGATCTATGGT...TACTTGGAATGACACAGATTGTTGTCTGCTGTACCTAGAGTACCTAATGTAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380470.7
ENST00000480796.6
CDS-3UTR CCA 90 bp TTCTACATTAGGTACTCTAGGTACAGCAGACAACAATCTGTGTCATTCCAAGTAGCCCACTTTGGTGGCTaGCATCAGTATGTAATTATT +
Preference number: 4 (lower is better)
Translates to: FYIRYSRYSRQQSVSFQVAHFGG*HQYVII
Trigger: AATAATTACATACTGATGCCAGCCACCAAAGTGGGC...TACTTGGAATGACACAGATTGTTGTCTGCTGTACCTAGAGTACCTAATGTAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR CCA 90 bp GGCTGGCATCAGTATGTAATTATTTCAAAAACCCTGAGCATCTTGACTTTGAAATTGAGCCCACTTTGGTaGCTGGCATCAGTATGTAAT +
Preference number: 4 (lower is better)
Translates to: GWHQYVIISKTLSILTLKLSPLW*LASVCN
Trigger: ATTACATACTGATGCCAGCCACCAAAGTGGGCTCAA...TTTCAAAGTCAAGATGCTCAGGGTTTTTGAAATAATTACATACTGATGCCAGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR CCA 90 bp TTCTACATTAGGTACTCTAGGTACAGCAGACAACAATCTGTGTCATTCCAAGTACCTTTGTGCTTATTTTaGGCCCCTATCCACAGAAAA +
Preference number: 4 (lower is better)
Translates to: FYIRYSRYSRQQSVSFQVPLCLF*APIHRK
Trigger: TTTTCTGTGGATAGGGGCCCAAAATAAGCACAAAGG...TACTTGGAATGACACAGATTGTTGTCTGCTGTACCTAGAGTACCTAATGTAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR TCA 90 bp TCTACATTAGGTACTCTAGGTACAGCAGACAACAATCTGTGTCATTCCAAGTATTTTTCCCCAGTTAATTaGAGCATTCTGATGCTTCGT +
Preference number: 4 (lower is better)
Translates to: STLGTLGTADNNLCHSKYFSPVN*SILMLR
Trigger: ACGAAGCATCAGAATGCTTCAATTAACTGGGGAAAA...ATACTTGGAATGACACAGATTGTTGTCTGCTGTACCTAGAGTACCTAATGTAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344384.8
CDS-3UTR TCA 90 bp TCTACATTAGGTACTCTAGGTACAGCAGACAACAATCTGTGTCATTCCAAGTATCCTTCTGATACGTTCTaGAACTTCACAATTCTTCTC +
Preference number: 4 (lower is better)
Translates to: STLGTLGTADNNLCHSKYPSDTF*NFTILL
Trigger: GAGAAGAATTGTGAAGTTTCAGAACGTATCAGAAGG...ATACTTGGAATGACACAGATTGTTGTCTGCTGTACCTAGAGTACCTAATGTAGA
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344384.8
3UTR CAA 72 bp TATGTAATTATTTCAAAAACCCTGAGCATCTTGACTTaGAAAATAAGCCAGTGCTTGGGTTGCAACATGCCT +
Preference number: 4 (lower is better)
Translates to: YVIISKTLSILT*KISQCLGCNMP
Trigger: AGGCATGTTGCAACCCAAGCACTGGCTTATTTTCAAAGTCAAGATGCTCAGGGTTTTTGAAATAATTACATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR TCA 90 bp GGCTGGCATCAGTATGTAATTATTTCAAAAACCCTGAGCATCTTGACTTTGAAAGGGATTTACTTCGACTaGGCTCATTTAAAGATACTA +
Preference number: 4 (lower is better)
Translates to: GWHQYVIISKTLSILTLKGIYFD*AHLKIL
Trigger: TAGTATCTTTAAATGAGCTCAGTCGAAGTAAATCCC...TTTCAAAGTCAAGATGCTCAGGGTTTTTGAAATAATTACATACTGATGCCAGCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS CCA 90 bp ACTGCAGCCTGGGCAACAGCACGAGACTCTCTCTTCACTGCCTCATaGATGGGCGAGGCCAGGTGCACCTCCAACTGGGCCTTGGCTCCG +
Preference number: 5 (lower is better)
Translates to: TAAWATARDSLFTAS*MGEARCTSNWALAP
Trigger: CGGAGCCAAGGCCCAGTTGGAGGTGCACCTGGCCTCGCCCATCCATGAGGCAGTGAAGAGAGAGTCTCGTGCTGTTGCCCAGGCTGCAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485437.2
CDS CCA 90 bp CAGCCTGGGCAACAGCACGAGACTCTCTCTTCACTGCCTCATGGATaGGCGAGGCCAGGTGCACCTCCAACTGGGCCTTGGCTCCGAACT +
Preference number: 5 (lower is better)
Translates to: QPGQQHETLSSLPHG*ARPGAPPTGPWLRT
Trigger: AGTTCGGAGCCAAGGCCCAGTTGGAGGTGCACCTGGCCTCGCCCATCCATGAGGCAGTGAAGAGAGAGTCTCGTGCTGTTGCCCAGGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485437.2
CDS-3UTR CAA 90 bp GTGGATGGCTTGATGACATGCTCGACCGAGACACTTCCGGACACACAGGCGGCAACCTCCAACTGGGCCTaGGCTCCGAACTCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: VDGLMTCSTETLPDTQAATSNWA*APNSSS
Trigger: GCTGCTGGAGTTCGGAGCCAAGGCCCAGTTGGAGGT...TGCCGCCTGTGTGTCCGGAAGTGTCTCGGTCGAGCATGTCATCAAGCCATCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485437.2
CDS GCA 90 bp CTCCAACTGGGCCTTGGCTCCGAACTCCAGCAGCACATTGACACATaGAGCACTGCCGCTGCAGCAAGCATTGAAGAGGGGTGTGGCTCC +
Preference number: 5 (lower is better)
Translates to: LQLGLGSELQQHIDT*STAAAASIEEGCGS
Trigger: GGAGCCACACCCCTCTTCAATGCTTGCTGCAGCGGCAGTGCTGCATGTGTCAATGTGCTGCTGGAGTTCGGAGCCAAGGCCCAGTTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
ENST00000485437.2
CDS CCA 90 bp CTCTTCACTGCCTCATGGATGGGCGAGGCCAGGTGCACCTCCAACTaGGCCTTGGCTCCGAACTCCAGCAGCACATTGACACATGCAGCA +
Preference number: 5 (lower is better)
Translates to: LFTASWMGEARCTSN*ALAPNSSSTLTHAA
Trigger: TGCTGCATGTGTCAATGTGCTGCTGGAGTTCGGAGCCAAGGCCCAGTTGGAGGTGCACCTGGCCTCGCCCATCCATGAGGCAGTGAAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
ENST00000485437.2
CDS-3UTR CAA 90 bp TGGCTTGATGACATGCTCGACCGAGACACTTCCGGACACACAGGCGGCAGAGCTTGGATGACCTCCACATaGGACTGCCTCGCTGCAGCA +
Preference number: 5 (lower is better)
Translates to: WLDDMLDRDTSGHTGGRAWMTST*DCLAAA
Trigger: TGCTGCAGCGAGGCAGTCCAATGTGGAGGTCATCCA...AGCTCTGCCGCCTGTGTGTCCGGAAGTGTCTCGGTCGAGCATGTCATCAAGCCA
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485437.2
CDS-3UTR CAA 90 bp CTGCTCCACGCTGCTTTTTGGAGCCGCCAGATCAAGCGCACTTTTGCCCTGAGCAACTCCAGCAGCACATaGACACATGCAGCACTGCCG +
Preference number: 5 (lower is better)
Translates to: LLHAAFWSRQIKRTFALSNSSST*THAALP
Trigger: CGGCAGTGCTGCATGTGTCAATGTGCTGCTGGAGTT...GCTCAGGGCAAAAGTGCGCTTGATCTGGCGGCTCCAAAAAGCAGCGTGGAGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485437.2
CDS-3UTR CAA 90 bp CAACCTCTGGGTGCACTGATCTCTTCCAAAGTCTCTCTTATCAACCAGGACCGCCCGCTGCAGCAAGCATaGAAGAGGGGTGTGGCTCCG +
Preference number: 5 (lower is better)
Translates to: QPLGALISSKVSLINQDRPLQQA*KRGVAP
Trigger: CGGAGCCACACCCCTCTTCAATGCTTGCTGCAGCGG...GCGGTCCTGGTTGATAAGAGAGACTTTGGAAGAGATCAGTGCACCCAGAGGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR CAA 90 bp GACAATGCCTGTGGGTTCAGGTTGTTGGGGACACCCAGTGTTCTCAATCCTAGAACCTCCAACTGGGCCTaGGCTCCGAACTCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: DNACGFRLLGTPSVLNPRTSNWA*APNSSS
Trigger: GCTGCTGGAGTTCGGAGCCAAGGCCCAGTTGGAGGT...TCTAGGATTGAGAACACTGGGTGTCCCCAACAACCTGAACCCACAGGCATTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR CAA 90 bp TGCCTCAGACAATGCCTGTGGGTTCAGGTTGTTGGGGACACCCAGTGTTCTCAAGCTCCACGCTGCTTTTaGGAGCCGCCAGATCAAGCG +
Preference number: 5 (lower is better)
Translates to: CLRQCLWVQVVGDTQCSQAPRCF*EPPDQA
Trigger: CGCTTGATCTGGCGGCTCCAAAAAGCAGCGTGGAGC...TTGAGAACACTGGGTGTCCCCAACAACCTGAACCCACAGGCATTGTCTGAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR CAA 90 bp TTGCTGGCTCCTGTGCACTGTAGGGTGATTAGCTGCATCCCTGATCTCCACCGTTGTGGGTTCAGGTTGTaGGGGACACCCAGTGTTCTC +
Preference number: 5 (lower is better)
Translates to: LLAPVHCRVISCIPDLHRCGFRL*GTPSVL
Trigger: GAGAACACTGGGTGTCCCCAACAACCTGAACCCACA...ACGGTGGAGATCAGGGATGCAGCTAATCACCCTACAGTGCACAGGAGCCAGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380470.7
ENST00000480796.6
CDS-3UTR CAA 90 bp GACAATGCCTGTGGGTTCAGGTTGTTGGGGACACCCAGTGTTCTCAATCCTAGATGGATGACCTCCACATaGGACTGCCTCGCTGCAGCA +
Preference number: 5 (lower is better)
Translates to: DNACGFRLLGTPSVLNPRWMTST*DCLAAA
Trigger: TGCTGCAGCGAGGCAGTCCAATGTGGAGGTCATCCA...TCTAGGATTGAGAACACTGGGTGTCCCCAACAACCTGAACCCACAGGCATTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR CAA 90 bp TTGCTGGCTCCTGTGCACTGTAGGGTGATTAGCTGCATCCCTGATCTCCACCGTAGCATTGAGCCCACTTaGGTGGCTGGCATCAGTATG +
Preference number: 5 (lower is better)
Translates to: LLAPVHCRVISCIPDLHRSIEPT*VAGISM
Trigger: CATACTGATGCCAGCCACCAAAGTGGGCTCAATGCT...ACGGTGGAGATCAGGGATGCAGCTAATCACCCTACAGTGCACAGGAGCCAGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380470.7
ENST00000480796.6
CDS-3UTR CAA 90 bp CAACCTCTGGGTGCACTGATCTCTTCCAAAGTCTCTCTTATCAACCAGGACCGCAACTCCAGCAGCACATaGACACATGCAGCACTGCCG +
Preference number: 5 (lower is better)
Translates to: QPLGALISSKVSLINQDRNSSST*THAALP
Trigger: CGGCAGTGCTGCATGTGTCAATGTGCTGCTGGAGTT...GCGGTCCTGGTTGATAAGAGAGACTTTGGAAGAGATCAGTGCACCCAGAGGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR CAA 90 bp ATCAAGCGCACTTTTGCCCTGAGCATTTCTACGCTTCAGGTTAGCTCCATAGTCGCTCCACGCTGCTTTTaGGAGCCGCCAGATCAAGCG +
Preference number: 5 (lower is better)
Translates to: IKRTFALSISTLQVSSIVAPRCF*EPPDQA
Trigger: CGCTTGATCTGGCGGCTCCAAAAAGCAGCGTGGAGC...GACTATGGAGCTAACCTGAAGCGTAGAAATGCTCAGGGCAAAAGTGCGCTTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485437.2
CDS-3UTR CAA 90 bp GACAATGCCTGTGGGTTCAGGTTGTTGGGGACACCCAGTGTTCTCAATCCTAGATGTGGGTTCAGGTTGTaGGGGACACCCAGTGTTCTC +
Preference number: 5 (lower is better)
Translates to: DNACGFRLLGTPSVLNPRCGFRL*GTPSVL
Trigger: GAGAACACTGGGTGTCCCCAACAACCTGAACCCACA...TCTAGGATTGAGAACACTGGGTGTCCCCAACAACCTGAACCCACAGGCATTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR CAA 90 bp TGCCTCAGACAATGCCTGTGGGTTCAGGTTGTTGGGGACACCCAGTGTTCTCAAAGCATTGAGCCCACTTaGGTGGCTGGCATCAGTATG +
Preference number: 5 (lower is better)
Translates to: CLRQCLWVQVVGDTQCSQSIEPT*VAGISM
Trigger: CATACTGATGCCAGCCACCAAAGTGGGCTCAATGCT...TTGAGAACACTGGGTGTCCCCAACAACCTGAACCCACAGGCATTGTCTGAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR CAA 90 bp GACAATGCCTGTGGGTTCAGGTTGTTGGGGACACCCAGTGTTCTCAATCCTAGATGCAGTGGCGTGATCTaGGCTTACTGCAATCTCCGC +
Preference number: 5 (lower is better)
Translates to: DNACGFRLLGTPSVLNPRCSGVI*AYCNLR
Trigger: GCGGAGATTGCAGTAAGCCAAGATCACGCCACTGCA...TCTAGGATTGAGAACACTGGGTGTCCCCAACAACCTGAACCCACAGGCATTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380470.7
ENST00000480796.6
CDS-3UTR CAA 90 bp TTCAGGTTGTTGGGGACACCCAGTGTTCTCAATCCTAGAACTGCTTACTTCAAAACCTCCAACTGGGCCTaGGCTCCGAACTCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: FRLLGTPSVLNPRTAYFKTSNWA*APNSSS
Trigger: GCTGCTGGAGTTCGGAGCCAAGGCCCAGTTGGAGGT...TTTGAAGTAAGCAGTTCTAGGATTGAGAACACTGGGTGTCCCCAACAACCTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR CAA 90 bp TCTGCAGACATTGACAAATGTCTCAGTGGGAGTGGGGCAAAATTGTCTCCAGTTGCTCCACGCTGCTTTTaGGAGCCGCCAGATCAAGCG +
Preference number: 5 (lower is better)
Translates to: SADIDKCLSGSGAKLSPVAPRCF*EPPDQA
Trigger: CGCTTGATCTGGCGGCTCCAAAAAGCAGCGTGGAGC...AACTGGAGACAATTTTGCCCCACTCCCACTGAGACATTTGTCAATGTCTGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000380470.7
ENST00000480796.6
CDS-3UTR CAA 90 bp CAACCTCTGGGTGCACTGATCTCTTCCAAAGTCTCTCTTATCAACCAGGACCGCAGCATTGAGCCCACTTaGGTGGCTGGCATCAGTATG +
Preference number: 5 (lower is better)
Translates to: QPLGALISSKVSLINQDRSIEPT*VAGISM
Trigger: CATACTGATGCCAGCCACCAAAGTGGGCTCAATGCT...GCGGTCCTGGTTGATAAGAGAGACTTTGGAAGAGATCAGTGCACCCAGAGGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR CAA 90 bp TGCCTCAGACAATGCCTGTGGGTTCAGGTTGTTGGGGACACCCAGTGTTCTCAAAATATTGACCCAGCATaGAGCCCACTTTGGTGGCTG +
Preference number: 5 (lower is better)
Translates to: CLRQCLWVQVVGDTQCSQNIDPA*SPLWWL
Trigger: CAGCCACCAAAGTGGGCTCAATGCTGGGTCAATATT...TTGAGAACACTGGGTGTCCCCAACAACCTGAACCCACAGGCATTGTCTGAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR CAA 90 bp TGCCTCAGACAATGCCTGTGGGTTCAGGTTGTTGGGGACACCCAGTGTTCTCAAAAAATAAGCCAGTGCTaGGGTTGCAACATGCCTCAG +
Preference number: 5 (lower is better)
Translates to: CLRQCLWVQVVGDTQCSQKISQC*GCNMPQ
Trigger: CTGAGGCATGTTGCAACCCAAGCACTGGCTTATTTT...TTGAGAACACTGGGTGTCCCCAACAACCTGAACCCACAGGCATTGTCTGAGGCA
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR CAA 90 bp CAACCTCTGGGTGCACTGATCTCTTCCAAAGTCTCTCTTATCAACCAGGACCGCAATATTGACCCAGCATaGAGCCCACTTTGGTGGCTG +
Preference number: 5 (lower is better)
Translates to: QPLGALISSKVSLINQDRNIDPA*SPLWWL
Trigger: CAGCCACCAAAGTGGGCTCAATGCTGGGTCAATATT...GCGGTCCTGGTTGATAAGAGAGACTTTGGAAGAGATCAGTGCACCCAGAGGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR CAA 90 bp TTGCTGGCTCCTGTGCACTGTAGGGTGATTAGCTGCATCCCTGATCTCCACCGTGCAATTCTCCCCCAGTaGTTGCAACTAAACATGTCT +
Preference number: 5 (lower is better)
Translates to: LLAPVHCRVISCIPDLHRAILPQ*LQLNMS
Trigger: AGACATGTTTAGTTGCAACAACTGGGGGAGAATTGC...ACGGTGGAGATCAGGGATGCAGCTAATCACCCTACAGTGCACAGGAGCCAGCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380470.7
ENST00000480796.6
CDS-3UTR CAA 90 bp TTGCTGGCTCCTGTGCACTGTAGGGTGATTAGCTGCATCCCTGATCTCCACCGTTCTGATAATTCTTTGTaGCTGGCTCCTGTGCACTGT +
Preference number: 5 (lower is better)
Translates to: LLAPVHCRVISCIPDLHRSDNSL*LAPVHC
Trigger: ACAGTGCACAGGAGCCAGCAACAAAGAATTATCAGA...ACGGTGGAGATCAGGGATGCAGCTAATCACCCTACAGTGCACAGGAGCCAGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380470.7
ENST00000480796.6
CDS-3UTR CAA 90 bp AGTCTACCCTCTGGTAGGTGCAGGCCACATATAGGGGAGTTCCGAGCTGAGGCAGTCACAAGGTTCACATaGACACCTTGTGCAATTAAA +
Preference number: 5 (lower is better)
Translates to: SLPSGRCRPHIGEFRAEAVTRFT*TPCAIK
Trigger: TTTAATTGCACAAGGTGTCAATGTGAACCTTGTGAC...TGCCTCAGCTCGGAACTCCCCTATATGTGGCCTGCACCTACCAGAGGGTAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485437.2
CDS-3UTR CAA 90 bp CAGTGCTTGGGTTGCAACATGCCTCAGACAATGCCTGTGGGTTCAGGTTGTTGGACCTTTGTGCTTATTTaGGGCCCCTATCCACAGAAA +
Preference number: 5 (lower is better)
Translates to: QCLGCNMPQTMPVGSGCWTFVLI*GPYPQK
Trigger: TTTCTGTGGATAGGGGCCCAAAATAAGCACAAAGGT...CCAACAACCTGAACCCACAGGCATTGTCTGAGGCATGTTGCAACCCAAGCACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR CAA 90 bp CAGTGCTTGGGTTGCAACATGCCTCAGACAATGCCTGTGGGTTCAGGTTGTTGGGCAATTCTCCCCCAGTaGTTGCAACTAAACATGTCT +
Preference number: 5 (lower is better)
Translates to: QCLGCNMPQTMPVGSGCWAILPQ*LQLNMS
Trigger: AGACATGTTTAGTTGCAACAACTGGGGGAGAATTGC...CCAACAACCTGAACCCACAGGCATTGTCTGAGGCATGTTGCAACCCAAGCACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380470.7
ENST00000480796.6
CDS-3UTR CAA 90 bp CAGTGCTTGGGTTGCAACATGCCTCAGACAATGCCTGTGGGTTCAGGTTGTTGGTCTGATAATTCTTTGTaGCTGGCTCCTGTGCACTGT +
Preference number: 5 (lower is better)
Translates to: QCLGCNMPQTMPVGSGCWSDNSL*LAPVHC
Trigger: ACAGTGCACAGGAGCCAGCAACAAAGAATTATCAGA...CCAACAACCTGAACCCACAGGCATTGTCTGAGGCATGTTGCAACCCAAGCACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380470.7
ENST00000480796.6
CDS-3UTR CAA 90 bp CAGTGCTTGGGTTGCAACATGCCTCAGACAATGCCTGTGGGTTCAGGTTGTTGGGGACCATCTTCCATTTaGGCTTATGCTCTGTATAGG +
Preference number: 5 (lower is better)
Translates to: QCLGCNMPQTMPVGSGCWGPSSI*AYALYR
Trigger: CCTATACAGAGCATAAGCCAAAATGGAAGATGGTCC...CCAACAACCTGAACCCACAGGCATTGTCTGAGGCATGTTGCAACCCAAGCACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480796.6
CDS-3UTR CAA 90 bp TTCTACATTAGGTACTCTAGGTACAGCAGACAACAATCTGTGTCATTCCAAGTACCGCTGCAGCAAGCATaGAAGAGGGGTGTGGCTCCG +
Preference number: 5 (lower is better)
Translates to: FYIRYSRYSRQQSVSFQVPLQQA*KRGVAP
Trigger: CGGAGCCACACCCCTCTTCAATGCTTGCTGCAGCGG...TACTTGGAATGACACAGATTGTTGTCTGCTGTACCTAGAGTACCTAATGTAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR CAA 90 bp TTAGGTACTCTAGGTACAGCAGACAACAATCTGTGTCATTCCAAGTATCTTCCCTGGATGACCTCCACATaGGACTGCCTCGCTGCAGCA +
Preference number: 5 (lower is better)
Translates to: LGTLGTADNNLCHSKYLPWMTST*DCLAAA
Trigger: TGCTGCAGCGAGGCAGTCCAATGTGGAGGTCATCCA...GGGAAGATACTTGGAATGACACAGATTGTTGTCTGCTGTACCTAGAGTACCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR CAA 90 bp GACAATGCCTGTGGGTTCAGGTTGTTGGGGACACCCAGTGTTCTCAATCCTAGAACCTTTGTGCTTATTTaGGGCCCCTATCCACAGAAA +
Preference number: 5 (lower is better)
Translates to: DNACGFRLLGTPSVLNPRTFVLI*GPYPQK
Trigger: TTTCTGTGGATAGGGGCCCAAAATAAGCACAAAGGT...TCTAGGATTGAGAACACTGGGTGTCCCCAACAACCTGAACCCACAGGCATTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR CAA 90 bp GACAATGCCTGTGGGTTCAGGTTGTTGGGGACACCCAGTGTTCTCAATCCTAGAACATGTCTGCAGACATaGACAAATGTCTCAGTGGGA +
Preference number: 5 (lower is better)
Translates to: DNACGFRLLGTPSVLNPRTCLQT*TNVSVG
Trigger: TCCCACTGAGACATTTGTCAATGTCTGCAGACATGT...TCTAGGATTGAGAACACTGGGTGTCCCCAACAACCTGAACCCACAGGCATTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380470.7
ENST00000480796.6
CDS-3UTR CAA 90 bp GGCTGGCATCAGTATGTAATTATTTCAAAAACCCTGAGCATCTTGACTTTGAAAACCTCCAACTGGGCCTaGGCTCCGAACTCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: GWHQYVIISKTLSILTLKTSNWA*APNSSS
Trigger: GCTGCTGGAGTTCGGAGCCAAGGCCCAGTTGGAGGT...TTTCAAAGTCAAGATGCTCAGGGTTTTTGAAATAATTACATACTGATGCCAGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR CAA 90 bp TCTACATTAGGTACTCTAGGTACAGCAGACAACAATCTGTGTCATTCCAAGTATGCTCCACGCTGCTTTTaGGAGCCGCCAGATCAAGCG +
Preference number: 5 (lower is better)
Translates to: STLGTLGTADNNLCHSKYAPRCF*EPPDQA
Trigger: CGCTTGATCTGGCGGCTCCAAAAAGCAGCGTGGAGC...ATACTTGGAATGACACAGATTGTTGTCTGCTGTACCTAGAGTACCTAATGTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR CAA 90 bp CAACCTCTGGGTGCACTGATCTCTTCCAAAGTCTCTCTTATCAACCAGGACCGCGTCACAAGGTTCACATaGACACCTTGTGCAATTAAA +
Preference number: 5 (lower is better)
Translates to: QPLGALISSKVSLINQDRVTRFT*TPCAIK
Trigger: TTTAATTGCACAAGGTGTCAATGTGAACCTTGTGAC...GCGGTCCTGGTTGATAAGAGAGACTTTGGAAGAGATCAGTGCACCCAGAGGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344384.8
ENST00000480796.6
CDS-3UTR CAA 90 bp TCTACATTAGGTACTCTAGGTACAGCAGACAACAATCTGTGTCATTCCAAGTATTGGATGACCTCCACATaGGACTGCCTCGCTGCAGCA +
Preference number: 5 (lower is better)
Translates to: STLGTLGTADNNLCHSKYWMTST*DCLAAA
Trigger: TGCTGCAGCGAGGCAGTCCAATGTGGAGGTCATCCA...ATACTTGGAATGACACAGATTGTTGTCTGCTGTACCTAGAGTACCTAATGTAGA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR CAA 90 bp TGCCTCAGACAATGCCTGTGGGTTCAGGTTGTTGGGGACACCCAGTGTTCTCAAGTTTCTACTTGCCCCTaGGTTAATGAGAACATTAAA +
Preference number: 5 (lower is better)
Translates to: CLRQCLWVQVVGDTQCSQVSTCP*VNENIK
Trigger: TTTAATGTTCTCATTAACCAAGGGGCAAGTAGAAAC...TTGAGAACACTGGGTGTCCCCAACAACCTGAACCCACAGGCATTGTCTGAGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR CAA 90 bp TTCAGGTTGTTGGGGACACCCAGTGTTCTCAATCCTAGAACTGCTTACTTCAAAAAGCCAGTGCTTGGGTaGCAACATGCCTCAGACAAT +
Preference number: 5 (lower is better)
Translates to: FRLLGTPSVLNPRTAYFKKPVLG*QHASDN
Trigger: ATTGTCTGAGGCATGTTGCAACCCAAGCACTGGCTT...TTTGAAGTAAGCAGTTCTAGGATTGAGAACACTGGGTGTCCCCAACAACCTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR CAA 90 bp CAACCTCTGGGTGCACTGATCTCTTCCAAAGTCTCTCTTATCAACCAGGACCGCAAAACCCTGAGCATCTaGACTTTGAAAATAAGCCAG +
Preference number: 5 (lower is better)
Translates to: QPLGALISSKVSLINQDRKTLSI*TLKISQ
Trigger: CTGGCTTATTTTCAAAGTCAAGATGCTCAGGGTTTT...GCGGTCCTGGTTGATAAGAGAGACTTTGGAAGAGATCAGTGCACCCAGAGGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR CAA 90 bp TTAGGTACTCTAGGTACAGCAGACAACAATCTGTGTCATTCCAAGTATCTTCCCGGGAGTGGGGCAAAATaGTCTCCAGTTGAGAGCCAA +
Preference number: 5 (lower is better)
Translates to: LGTLGTADNNLCHSKYLPGSGAK*SPVESQ
Trigger: TTGGCTCTCAACTGGAGACAATTTTGCCCCACTCCC...GGGAAGATACTTGGAATGACACAGATTGTTGTCTGCTGTACCTAGAGTACCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380470.7
ENST00000480796.6
CDS-3UTR CAA 90 bp TTCTACATTAGGTACTCTAGGTACAGCAGACAACAATCTGTGTCATTCCAAGTAAACTCCAGCAGCACATaGACACATGCAGCACTGCCG +
Preference number: 5 (lower is better)
Translates to: FYIRYSRYSRQQSVSFQVNSSST*THAALP
Trigger: CGGCAGTGCTGCATGTGTCAATGTGCTGCTGGAGTT...TACTTGGAATGACACAGATTGTTGTCTGCTGTACCTAGAGTACCTAATGTAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR CAA 90 bp GTGATTAGCTGCATCCCTGATCTCCACCGTCTAGATGATAGTAGCAATTCTCCCCTGAGCATCTTGACTTaGAAAATAAGCCAGTGCTTG +
Preference number: 5 (lower is better)
Translates to: VISCIPDLHRLDDSSNSPLSILT*KISQCL
Trigger: CAAGCACTGGCTTATTTTCAAAGTCAAGATGCTCAG...GGGAGAATTGCTACTATCATCTAGACGGTGGAGATCAGGGATGCAGCTAATCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380470.7
ENST00000480796.6
CDS-3UTR CAA 90 bp TCTGCAGACATTGACAAATGTCTCAGTGGGAGTGGGGCAAAATTGTCTCCAGTTACCTTTGTGCTTATTTaGGGCCCCTATCCACAGAAA +
Preference number: 5 (lower is better)
Translates to: SADIDKCLSGSGAKLSPVTFVLI*GPYPQK
Trigger: TTTCTGTGGATAGGGGCCCAAAATAAGCACAAAGGT...AACTGGAGACAATTTTGCCCCACTCCCACTGAGACATTTGTCAATGTCTGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000380470.7
ENST00000480796.6
CDS-3UTR CAA 90 bp TCTACATTAGGTACTCTAGGTACAGCAGACAACAATCTGTGTCATTCCAAGTATTGCAGTGGCGTGATCTaGGCTTACTGCAATCTCCGC +
Preference number: 5 (lower is better)
Translates to: STLGTLGTADNNLCHSKYCSGVI*AYCNLR
Trigger: GCGGAGATTGCAGTAAGCCAAGATCACGCCACTGCA...ATACTTGGAATGACACAGATTGTTGTCTGCTGTACCTAGAGTACCTAATGTAGA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380470.7
ENST00000480796.6
CDS-3UTR CAA 90 bp GGCTGGCATCAGTATGTAATTATTTCAAAAACCCTGAGCATCTTGACTTTGAAAAACTCCAGCAGCACATaGACACATGCAGCACTGCCG +
Preference number: 5 (lower is better)
Translates to: GWHQYVIISKTLSILTLKNSSST*THAALP
Trigger: CGGCAGTGCTGCATGTGTCAATGTGCTGCTGGAGTT...TTTCAAAGTCAAGATGCTCAGGGTTTTTGAAATAATTACATACTGATGCCAGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR CAA 90 bp TCTGCAGACATTGACAAATGTCTCAGTGGGAGTGGGGCAAAATTGTCTCCAGTTCTGAGCATCTTGACTTaGAAAATAAGCCAGTGCTTG +
Preference number: 5 (lower is better)
Translates to: SADIDKCLSGSGAKLSPVLSILT*KISQCL
Trigger: CAAGCACTGGCTTATTTTCAAAGTCAAGATGCTCAG...AACTGGAGACAATTTTGCCCCACTCCCACTGAGACATTTGTCAATGTCTGCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000380470.7
ENST00000480796.6
CDS-3UTR CAA 90 bp GTGATTAGCTGCATCCCTGATCTCCACCGTCTAGATGATAGTAGCAATTCTCCCGTTTCTACTTGCCCCTaGGTTAATGAGAACATTAAA +
Preference number: 5 (lower is better)
Translates to: VISCIPDLHRLDDSSNSPVSTCP*VNENIK
Trigger: TTTAATGTTCTCATTAACCAAGGGGCAAGTAGAAAC...GGGAGAATTGCTACTATCATCTAGACGGTGGAGATCAGGGATGCAGCTAATCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380470.7
ENST00000480796.6
CDS-3UTR CAA 90 bp TTCTACATTAGGTACTCTAGGTACAGCAGACAACAATCTGTGTCATTCCAAGTAAAGCCAGTGCTTGGGTaGCAACATGCCTCAGACAAT +
Preference number: 5 (lower is better)
Translates to: FYIRYSRYSRQQSVSFQVKPVLG*QHASDN
Trigger: ATTGTCTGAGGCATGTTGCAACCCAAGCACTGGCTT...TACTTGGAATGACACAGATTGTTGTCTGCTGTACCTAGAGTACCTAATGTAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR CAA 90 bp TTCAGGTTGTTGGGGACACCCAGTGTTCTCAATCCTAGAACTGCTTACTTCAAACTGAGCATCTTGACTTaGAAAATAAGCCAGTGCTTG +
Preference number: 5 (lower is better)
Translates to: FRLLGTPSVLNPRTAYFKLSILT*KISQCL
Trigger: CAAGCACTGGCTTATTTTCAAAGTCAAGATGCTCAG...TTTGAAGTAAGCAGTTCTAGGATTGAGAACACTGGGTGTCCCCAACAACCTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR CAA 90 bp TCTACATTAGGTACTCTAGGTACAGCAGACAACAATCTGTGTCATTCCAAGTATAATATTGACCCAGCATaGAGCCCACTTTGGTGGCTG +
Preference number: 5 (lower is better)
Translates to: STLGTLGTADNNLCHSKYNIDPA*SPLWWL
Trigger: CAGCCACCAAAGTGGGCTCAATGCTGGGTCAATATT...ATACTTGGAATGACACAGATTGTTGTCTGCTGTACCTAGAGTACCTAATGTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR CAA 90 bp GGCTGGCATCAGTATGTAATTATTTCAAAAACCCTGAGCATCTTGACTTTGAAAGGGAGTGGGGCAAAATaGTCTCCAGTTGAGAGCCAA +
Preference number: 5 (lower is better)
Translates to: GWHQYVIISKTLSILTLKGSGAK*SPVESQ
Trigger: TTGGCTCTCAACTGGAGACAATTTTGCCCCACTCCC...TTTCAAAGTCAAGATGCTCAGGGTTTTTGAAATAATTACATACTGATGCCAGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000380470.7
ENST00000480796.6
CDS-3UTR CAA 90 bp TTAGGTACTCTAGGTACAGCAGACAACAATCTGTGTCATTCCAAGTATCTTCCCACATGTCTGCAGACATaGACAAATGTCTCAGTGGGA +
Preference number: 5 (lower is better)
Translates to: LGTLGTADNNLCHSKYLPTCLQT*TNVSVG
Trigger: TCCCACTGAGACATTTGTCAATGTCTGCAGACATGT...GGGAAGATACTTGGAATGACACAGATTGTTGTCTGCTGTACCTAGAGTACCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380470.7
ENST00000480796.6
CDS-3UTR CAA 90 bp TTCAGGTTGTTGGGGACACCCAGTGTTCTCAATCCTAGAACTGCTTACTTCAAAGTCACAAGGTTCACATaGACACCTTGTGCAATTAAA +
Preference number: 5 (lower is better)
Translates to: FRLLGTPSVLNPRTAYFKVTRFT*TPCAIK
Trigger: TTTAATTGCACAAGGTGTCAATGTGAACCTTGTGAC...TTTGAAGTAAGCAGTTCTAGGATTGAGAACACTGGGTGTCCCCAACAACCTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344384.8
ENST00000480796.6
CDS-3UTR CAA 90 bp TTCTACATTAGGTACTCTAGGTACAGCAGACAACAATCTGTGTCATTCCAAGTAAAAATAAGCCAGTGCTaGGGTTGCAACATGCCTCAG +
Preference number: 5 (lower is better)
Translates to: FYIRYSRYSRQQSVSFQVKISQC*GCNMPQ
Trigger: CTGAGGCATGTTGCAACCCAAGCACTGGCTTATTTT...TACTTGGAATGACACAGATTGTTGTCTGCTGTACCTAGAGTACCTAATGTAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR CAA 90 bp TCTACATTAGGTACTCTAGGTACAGCAGACAACAATCTGTGTCATTCCAAGTATAAAATAAGCCAGTGCTaGGGTTGCAACATGCCTCAG +
Preference number: 5 (lower is better)
Translates to: STLGTLGTADNNLCHSKYKISQC*GCNMPQ
Trigger: CTGAGGCATGTTGCAACCCAAGCACTGGCTTATTTT...ATACTTGGAATGACACAGATTGTTGTCTGCTGTACCTAGAGTACCTAATGTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR CAA 90 bp TTCAGGTTGTTGGGGACACCCAGTGTTCTCAATCCTAGAACTGCTTACTTCAAAGTTTCTACTTGCCCCTaGGTTAATGAGAACATTAAA +
Preference number: 5 (lower is better)
Translates to: FRLLGTPSVLNPRTAYFKVSTCP*VNENIK
Trigger: TTTAATGTTCTCATTAACCAAGGGGCAAGTAGAAAC...TTTGAAGTAAGCAGTTCTAGGATTGAGAACACTGGGTGTCCCCAACAACCTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR CAA 90 bp TCTACATTAGGTACTCTAGGTACAGCAGACAACAATCTGTGTCATTCCAAGTATAAAACCCTGAGCATCTaGACTTTGAAAATAAGCCAG +
Preference number: 5 (lower is better)
Translates to: STLGTLGTADNNLCHSKYKTLSI*TLKISQ
Trigger: CTGGCTTATTTTCAAAGTCAAGATGCTCAGGGTTTT...ATACTTGGAATGACACAGATTGTTGTCTGCTGTACCTAGAGTACCTAATGTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS-3UTR CAA 90 bp GGCTGGCATCAGTATGTAATTATTTCAAAAACCCTGAGCATCTTGACTTTGAAAAAAACCCTGAGCATCTaGACTTTGAAAATAAGCCAG +
Preference number: 5 (lower is better)
Translates to: GWHQYVIISKTLSILTLKKTLSI*TLKISQ
Trigger: CTGGCTTATTTTCAAAGTCAAGATGCTCAGGGTTTT...TTTCAAAGTCAAGATGCTCAGGGTTTTTGAAATAATTACATACTGATGCCAGCC
38% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
CDS TCA 90 bp AAACTTCACAATTCTTCTCATTTTCCCCAGTTAATTGAAGCATTCTaGTGCTTCGTCCTTGGAGGTCTTATTTCTTTAGATAAGACTGCT +
Preference number: 5 (lower is better)
Translates to: KLHNSSHFPQLIEAF*CFVLGGLISLDKTA
Trigger: AGCAGTCTTATCTAAAGAAATAAGACCTCCAAGGACGAAGCATCAGAATGCTTCAATTAACTGGGGAAAATGAGAAGAATTGTGAAGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344384.8
CDS CAA 90 bp ACTGCCTCATGGATGGGCGAGGCCAGGTGCACCTCCAACTGGGCCTaGGCTCCGAACTCCAGCAGCACATTGACACATGCAGCACTGCCG +
Preference number: 6 (lower is better)
Translates to: TASWMGEARCTSNWA*APNSSSTLTHAALP
Trigger: CGGCAGTGCTGCATGTGTCAATGTGCTGCTGGAGTTCGGAGCCAAGGCCCAGTTGGAGGTGCACCTGGCCTCGCCCATCCATGAGGCAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
ENST00000485437.2
CDS CCA 72 bp GCCTCATGGATGGGCGAGGCCAGGTGCACCTCCAACTaGGCCTTGGCTCCGAACTCCAGCAGCACATTGACA +
Preference number: 6 (lower is better)
Translates to: ASWMGEARCTSN*ALAPNSSSTLT
Trigger: TGTCAATGTGCTGCTGGAGTTCGGAGCCAAGGCCCAGTTGGAGGTGCACCTGGCCTCGCCCATCCATGAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
ENST00000485437.2
CDS CCA 72 bp TGGGCAACAGCACGAGACTCTCTCTTCACTGCCTCATaGATGGGCGAGGCCAGGTGCACCTCCAACTGGGCC +
Preference number: 6 (lower is better)
Translates to: WATARDSLFTAS*MGEARCTSNWA
Trigger: GGCCCAGTTGGAGGTGCACCTGGCCTCGCCCATCCATGAGGCAGTGAAGAGAGAGTCTCGTGCTGTTGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485437.2
CDS GCA 72 bp TGCAGCCTGGGCAACAGCACGAGACTCTCTCTTCACTaGCTCATGGATGGGCGAGGCCAGGTGCACCTCCAA +
Preference number: 6 (lower is better)
Translates to: CSLGNSTRLSLH*LMDGRGQVHLQ
Trigger: TTGGAGGTGCACCTGGCCTCGCCCATCCATGAGGCAGTGAAGAGAGAGTCTCGTGCTGTTGCCCAGGCTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485437.2
CDS CAA 72 bp TGGATGGGCGAGGCCAGGTGCACCTCCAACTGGGCCTaGGCTCCGAACTCCAGCAGCACATTGACACATGCA +
Preference number: 6 (lower is better)
Translates to: WMGEARCTSNWA*APNSSSTLTHA
Trigger: TGCATGTGTCAATGTGCTGCTGGAGTTCGGAGCCAAGGCCCAGTTGGAGGTGCACCTGGCCTCGCCCATCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
ENST00000485437.2
CDS GCA 72 bp GGCCTTGGCTCCGAACTCCAGCAGCACATTGACACATaGAGCACTGCCGCTGCAGCAAGCATTGAAGAGGGG +
Preference number: 6 (lower is better)
Translates to: GLGSELQQHIDT*STAAAASIEEG
Trigger: CCCCTCTTCAATGCTTGCTGCAGCGGCAGTGCTGCATGTGTCAATGTGCTGCTGGAGTTCGGAGCCAAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
ENST00000485437.2
CDS CAA 90 bp AGGTGCACCTCCAACTGGGCCTTGGCTCCGAACTCCAGCAGCACATaGACACATGCAGCACTGCCGCTGCAGCAAGCATTGAAGAGGGGT +
Preference number: 6 (lower is better)
Translates to: RCTSNWALAPNSSST*THAALPLQQALKRG
Trigger: ACCCCTCTTCAATGCTTGCTGCAGCGGCAGTGCTGCATGTGTCAATGTGCTGCTGGAGTTCGGAGCCAAGGCCCAGTTGGAGGTGCACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
ENST00000485437.2
CDS CAA 72 bp TCCAACTGGGCCTTGGCTCCGAACTCCAGCAGCACATaGACACATGCAGCACTGCCGCTGCAGCAAGCATTG +
Preference number: 6 (lower is better)
Translates to: SNWALAPNSSST*THAALPLQQAL
Trigger: CAATGCTTGCTGCAGCGGCAGTGCTGCATGTGTCAATGTGCTGCTGGAGTTCGGAGCCAAGGCCCAGTTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
ENST00000485437.2
CDS TCA 72 bp CCGCTGCAGCAAGCATTGAAGAGGGGTGTGGCTCCGTaGACTGTCACTCCATTGACGTGTGCACCATTTTCC +
Preference number: 6 (lower is better)
Translates to: PLQQALKRGVAP*TVTPLTCAPFS
Trigger: GGAAAATGGTGCACACGTCAATGGAGTGACAGTTCACGGAGCCACACCCCTCTTCAATGCTTGCTGCAGCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344384.8
ENST00000380470.7
ENST00000480796.6
ENST00000485437.2
CDS TCA 72 bp CCCCAAAAGAAATCTCTTTCCATGGTCCGGACCTTCTaGTACGTTCTGAAACTTCACAATTCTTCTCATTTT +
Preference number: 6 (lower is better)
Translates to: PQKKSLSMVRTF*YVLKLHNSSHF
Trigger: AAAATGAGAAGAATTGTGAAGTTTCAGAACGTATCAGAAGGTCCGGACCATGGAAAGAGATTTCTTTTGGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344384.8
CDS TCA 72 bp AATTCTTCTCATTTTCCCCAGTTAATTGAAGCATTCTaGTGCTTCGTCCTTGGAGGTCTTATTTCTTTAGAT +
Preference number: 6 (lower is better)
Translates to: NSSHFPQLIEAF*CFVLGGLISLD
Trigger: ATCTAAAGAAATAAGACCTCCAAGGACGAAGCATCAGAATGCTTCAATTAACTGGGGAAAATGAGAAGAATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344384.8