RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ASB10 (Homo sapiens)

Ensembl gene IDs: ENSG00000146926

Ensembl transcript IDs: ENST00000275838.5, ENST00000377867.7, ENST00000415615.1, ENST00000420175.3

Found 339 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCCACACCTGCCTGCGGAGCTGGGCCTCCTGCTGCCAGGGCTACCTaGCCTGAGTTAGTGCAGAGGCGCGCCCTCTGCAGGCTGGGGCAT +
Preference number: 1 (lower is better)
Translates to: STPACGAGPPAARAT*PELVQRRALCRLGH
Trigger: ATGCCCCAGCCTGCAGAGGGCGCGCCTCTGCACTAACTCAGGCCAGGTAGCCCTGGCAGCAGGAGGCCCAGCTCCGCAGGCAGGTGTGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
3UTR GCA 90 bp CATCACCCGGCTGCCGCTGTCGGTCCGCTTCTCTGCATTGGGAATTaGAGCATCCACACCTGCCTGCGGAGCTGGGCCTCCTGCTGCCAG +
Preference number: 1 (lower is better)
Translates to: HHPAAAVGPLLCIGN*SIHTCLRSWASCCQ
Trigger: CTGGCAGCAGGAGGCCCAGCTCCGCAGGCAGGTGTGGATGCTGCAATTCCCAATGCAGAGAAGCGGACCGACAGCGGCAGCCGGGTGATG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
3UTR GCA 90 bp GCTGCCAGGGCTACCTGGCCTGAGTTAGTGCAGAGGCGCGCCCTCTaGAGGCTGGGGCATCTGCTTTCAGGCCCTCTCAAAAGGCCATGG +
Preference number: 1 (lower is better)
Translates to: AARATWPELVQRRAL*RLGHLLSGPLKRPW
Trigger: CCATGGCCTTTTGAGAGGGCCTGAAAGCAGATGCCCCAGCCTGCAGAGGGCGCGCCTCTGCACTAACTCAGGCCAGGTAGCCCTGGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
3UTR CCA 90 bp CTGGGTCGCTGGTATCAAAGACGGAATCAGGAGCCAGGCCAGTACTaGAGTCCGCGAGGATGCGGGAGACACAGCCCACGTCCCCAGCCA +
Preference number: 1 (lower is better)
Translates to: LGRWYQRRNQEPGQY*SPRGCGRHSPRPQP
Trigger: TGGCTGGGGACGTGGGCTGTGTCTCCCGCATCCTCGCGGACTCCAGTACTGGCCTGGCTCCTGATTCCGTCTTTGATACCAGCGACCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415615.1
3UTR GCA 90 bp AGGAGAGCCCCAGTAGGAGTGTGTCTTCATCAGACATCACCCGGCTaGCGCTGTCGGTCCGCTTCTCTGCATTGGGAATTGCAGCATCCA +
Preference number: 1 (lower is better)
Translates to: RRAPVGVCLHQTSPG*RCRSASLHWELQHP
Trigger: TGGATGCTGCAATTCCCAATGCAGAGAAGCGGACCGACAGCGGCAGCCGGGTGATGTCTGATGAAGACACACTCCTACTGGGGCTCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
3UTR CCA 90 bp TCTGGGCTCCACATGACTGTGTTCTTGGGCCAAGGTGTAGGCTATTaGGCAAGCTTTGAGGTCGGGGAGAAACAGCCGGGGGCTTCTCCT +
Preference number: 1 (lower is better)
Translates to: SGLHMTVFLGQGVGY*ASFEVGEKQPGASP
Trigger: AGGAGAAGCCCCCGGCTGTTTCTCCCCGACCTCAAAGCTTGCCCAATAGCCTACACCTTGGCCCAAGAACACAGTCATGTGGAGCCCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000415615.1
3UTR CCA 90 bp TGGGCTTCTCCACCAGCCTGGCCACGCATCCAGCAGGAGCTATTCTaGGCTCCACATGACTGTGTTCTTGGGCCAAGGTGTAGGCTATTG +
Preference number: 1 (lower is better)
Translates to: WASPPAWPRIQQELF*APHDCVLGPRCRLL
Trigger: CAATAGCCTACACCTTGGCCCAAGAACACAGTCATGTGGAGCCCAGAATAGCTCCTGCTGGATGCGTGGCCAGGCTGGTGGAGAAGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415615.1
3UTR CCA 90 bp GAGTCTCAGAGCACGGATGTTGAAGCGGAAATCCCTCCATCGCTCTaGGTCGCTGGTATCAAAGACGGAATCAGGAGCCAGGCCAGTACT +
Preference number: 1 (lower is better)
Translates to: ESQSTDVEAEIPPSL*VAGIKDGIRSQAST
Trigger: AGTACTGGCCTGGCTCCTGATTCCGTCTTTGATACCAGCGACCCAGAGCGATGGAGGGATTTCCGCTTCAACATCCGTGCTCTGAGACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415615.1
3UTR CAA 90 bp GCAGGTCCTGAGGCTGTGCGGGTGACGATGGGTCCCGGGCCAGACTaGAGGTGCTCCTCAGACCCTCTGCTGGGCTTCTCCACCAGCCTG +
Preference number: 2 (lower is better)
Translates to: AGPEAVRVTMGPGPD*RCSSDPLLGFSTSL
Trigger: CAGGCTGGTGGAGAAGCCCAGCAGAGGGTCTGAGGAGCACCTCAAGTCTGGCCCGGGACCCATCGTCACCCGCACAGCCTCAGGACCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415615.1
3UTR-3UTR CCA 90 bp GTCTTCATCAGACATCACCCGGCTGCCGCTGTCGGTCCGCTTCTCTGCATTGGGACCTGCCTGCGGAGCTaGGCCTCCTGCTGCCAGGGC +
Preference number: 2 (lower is better)
Translates to: VFIRHHPAAAVGPLLCIGTCLRS*ASCCQG
Trigger: GCCCTGGCAGCAGGAGGCCCAGCTCCGCAGGCAGGT...CCCAATGCAGAGAAGCGGACCGACAGCGGCAGCCGGGTGATGTCTGATGAAGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
3UTR-3UTR GCA 90 bp AGCCCCAGTAGGAGTGTGTCTTCATCAGACATCACCCGGCTGCCGCTGTCGGTCCAGAGGCGCGCCCTCTaGAGGCTGGGGCATCTGCTT +
Preference number: 2 (lower is better)
Translates to: SPSRSVSSSDITRLPLSVQRRAL*RLGHLL
Trigger: AAGCAGATGCCCCAGCCTGCAGAGGGCGCGCCTCTG...GACCGACAGCGGCAGCCGGGTGATGTCTGATGAAGACACACTCCTACTGGGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
3UTR-3UTR GCA 90 bp CGGTCCGCTTCTCTGCATTGGGAATTGCAGCATCCACACCTGCCTGCGGAGCTGCAGAGGCGCGCCCTCTaGAGGCTGGGGCATCTGCTT +
Preference number: 2 (lower is better)
Translates to: RSASLHWELQHPHLPAELQRRAL*RLGHLL
Trigger: AAGCAGATGCCCCAGCCTGCAGAGGGCGCGCCTCTG...CAGCTCCGCAGGCAGGTGTGGATGCTGCAATTCCCAATGCAGAGAAGCGGACCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
3UTR-3UTR CCA 90 bp GTCCGCTTCTCTGCATTGGGAATTGCAGCATCCACACCTGCCTGCGGAGCTGGGGCGCCCTCTGCAGGCTaGGGCATCTGCTTTCAGGCC +
Preference number: 2 (lower is better)
Translates to: VRFSALGIAASTPACGAGAPSAG*GICFQA
Trigger: GGCCTGAAAGCAGATGCCCCAGCCTGCAGAGGGCGC...CCCAGCTCCGCAGGCAGGTGTGGATGCTGCAATTCCCAATGCAGAGAAGCGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
3UTR-3UTR CCA 90 bp GTCTTCATCAGACATCACCCGGCTGCCGCTGTCGGTCCGCTTCTCTGCATTGGGGCGCCCTCTGCAGGCTaGGGCATCTGCTTTCAGGCC +
Preference number: 2 (lower is better)
Translates to: VFIRHHPAAAVGPLLCIGAPSAG*GICFQA
Trigger: GGCCTGAAAGCAGATGCCCCAGCCTGCAGAGGGCGC...CCCAATGCAGAGAAGCGGACCGACAGCGGCAGCCGGGTGATGTCTGATGAAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
3UTR-3UTR CCA 90 bp TCATCAGACATCACCCGGCTGCCGCTGTCGGTCCGCTTCTCTGCATTGGGAATTACCTGCCTGCGGAGCTaGGCCTCCTGCTGCCAGGGC +
Preference number: 2 (lower is better)
Translates to: SSDITRLPLSVRFSALGITCLRS*ASCCQG
Trigger: GCCCTGGCAGCAGGAGGCCCAGCTCCGCAGGCAGGT...AATTCCCAATGCAGAGAAGCGGACCGACAGCGGCAGCCGGGTGATGTCTGATGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
3UTR-3UTR TCA 90 bp TCAGGAGCCAGGCCAGTACTGGAGTCCGCGAGGATGCGGGAGACACAGCCCACGCTATTGGGCAAGCTTTaGGGTCGGGGAGAAACAGCC +
Preference number: 2 (lower is better)
Translates to: SGARPVLESARMRETQPTLLGKL*GRGETA
Trigger: GGCTGTTTCTCCCCGACCTCAAAGCTTGCCCAATAG...CGTGGGCTGTGTCTCCCGCATCCTCGCGGACTCCAGTACTGGCCTGGCTCCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415615.1
3UTR-3UTR CCA 90 bp CAGAAGGCAAGGGCAGGTCCTGAGGCTGTGCGGGTGACGATGGGTCCCGGGCCACAAGGTGTAGGCTATTaGGCAAGCTTTGAGGTCGGG +
Preference number: 2 (lower is better)
Translates to: QKARAGPEAVRVTMGPGPQGVGY*ASFEVG
Trigger: CCCGACCTCAAAGCTTGCCCAATAGCCTACACCTTG...TGGCCCGGGACCCATCGTCACCCGCACAGCCTCAGGACCTGCCCTTGCCTTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415615.1
3UTR-3UTR TCA 90 bp TCTCAGAGCACGGATGTTGAAGCGGAAATCCCTCCATCGCTCTGGGTCGCTGGTGTCCCGGGCCAGACTTaGGGTGCTCCTCAGACCCTC +
Preference number: 2 (lower is better)
Translates to: SQSTDVEAEIPPSLWVAGVPGQT*GAPQTL
Trigger: GAGGGTCTGAGGAGCACCTCAAGTCTGGCCCGGGAC...ACCAGCGACCCAGAGCGATGGAGGGATTTCCGCTTCAACATCCGTGCTCTGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415615.1
3UTR-3UTR TCA 90 bp AGAGACCAGAGTCTCAGAGCACGGATGTTGAAGCGGAAATCCCTCCATCGCTCTCTGAGGCTGTGCGGGTaGCGATGGGTCCCGGGCCAG +
Preference number: 2 (lower is better)
Translates to: RDQSLRARMLKRKSLHRSLRLCG*RWVPGQ
Trigger: CTGGCCCGGGACCCATCGTCACCCGCACAGCCTCAG...AGAGCGATGGAGGGATTTCCGCTTCAACATCCGTGCTCTGAGACTCTGGTCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415615.1
3UTR-3UTR GCA 90 bp TCATCAGACATCACCCGGCTGCCGCTGTCGGTCCGCTTCTCTGCATTGGGAATTCAGAGGCGCGCCCTCTaGAGGCTGGGGCATCTGCTT +
Preference number: 2 (lower is better)
Translates to: SSDITRLPLSVRFSALGIQRRAL*RLGHLL
Trigger: AAGCAGATGCCCCAGCCTGCAGAGGGCGCGCCTCTG...AATTCCCAATGCAGAGAAGCGGACCGACAGCGGCAGCCGGGTGATGTCTGATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
3UTR-3UTR CCA 90 bp ATCACCCGGCTGCCGCTGTCGGTCCGCTTCTCTGCATTGGGAATTGCAGCATCCGCTGCCAGGGCTACCTaGCCTGAGTTAGTGCAGAGG +
Preference number: 2 (lower is better)
Translates to: ITRLPLSVRFSALGIAASAARAT*PELVQR
Trigger: CCTCTGCACTAACTCAGGCCAGGTAGCCCTGGCAGC...GGATGCTGCAATTCCCAATGCAGAGAAGCGGACCGACAGCGGCAGCCGGGTGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
3UTR-3UTR GCA 90 bp GTTGAAGCGGAAATCCCTCCATCGCTCTGGGTCGCTGGTATCAAAGACGGAATCTGGAGTCCGCGAGGATaGGGGAGACACAGCCCACGT +
Preference number: 2 (lower is better)
Translates to: VEAEIPPSLWVAGIKDGIWSPRG*GRHSPR
Trigger: ACGTGGGCTGTGTCTCCCGCATCCTCGCGGACTCCA...GATTCCGTCTTTGATACCAGCGACCCAGAGCGATGGAGGGATTTCCGCTTCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415615.1
3UTR CAA 90 bp CACGCATCCAGCAGGAGCTATTCTGGGCTCCACATGACTGTGTTCTaGGGCCAAGGTGTAGGCTATTGGGCAAGCTTTGAGGTCGGGGAG +
Preference number: 2 (lower is better)
Translates to: HASSRSYSGLHMTVF*GQGVGYWASFEVGE
Trigger: CTCCCCGACCTCAAAGCTTGCCCAATAGCCTACACCTTGGCCCAAGAACACAGTCATGTGGAGCCCAGAATAGCTCCTGCTGGATGCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415615.1
3UTR-3UTR TCA 90 bp TGGAGATTTTTAATGCACATACAGGGTTTGCACAGGCTAGAAGGGGGCCTCAGGCAGGGCTACCTGGCCTaGGTTAGTGCAGAGGCGCGC +
Preference number: 2 (lower is better)
Translates to: WRFLMHIQGLHRLEGGLRQGYLA*VSAEAR
Trigger: GCGCGCCTCTGCACTAACTCAGGCCAGGTAGCCCTG...CCTGAGGCCCCCTTCTAGCCTGTGCAAACCCTGTATGTGCATTAAAAATCTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
3UTR-3UTR CCA 90 bp AAAGACGGAATCAGGAGCCAGGCCAGTACTGGAGTCCGCGAGGATGCGGGAGACCAGCAGGAGCTATTCTaGGCTCCACATGACTGTGTT +
Preference number: 2 (lower is better)
Translates to: KDGIRSQASTGVREDAGDQQELF*APHDCV
Trigger: AACACAGTCATGTGGAGCCCAGAATAGCTCCTGCTG...GTCTCCCGCATCCTCGCGGACTCCAGTACTGGCCTGGCTCCTGATTCCGTCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415615.1
3UTR-3UTR TCA 90 bp GTTGAAGCGGAAATCCCTCCATCGCTCTGGGTCGCTGGTATCAAAGACGGAATCATTCTGGGCTCCACATaGCTGTGTTCTTGGGCCAAG +
Preference number: 2 (lower is better)
Translates to: VEAEIPPSLWVAGIKDGIILGST*LCSWAK
Trigger: CTTGGCCCAAGAACACAGTCATGTGGAGCCCAGAAT...GATTCCGTCTTTGATACCAGCGACCCAGAGCGATGGAGGGATTTCCGCTTCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415615.1
3UTR CCA 72 bp GCCTGCGGAGCTGGGCCTCCTGCTGCCAGGGCTACCTaGCCTGAGTTAGTGCAGAGGCGCGCCCTCTGCAGG +
Preference number: 3 (lower is better)
Translates to: ACGAGPPAARAT*PELVQRRALCR
Trigger: CCTGCAGAGGGCGCGCCTCTGCACTAACTCAGGCCAGGTAGCCCTGGCAGCAGGAGGCCCAGCTCCGCAGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
3UTR TCA 72 bp AGCCAGCACTGCCTGCCAGAAGGCAAGGGCAGGTCCTaGGGCTGTGCGGGTGACGATGGGTCCCGGGCCAGA +
Preference number: 3 (lower is better)
Translates to: SQHCLPEGKGRS*GCAGDDGSRAR
Trigger: TCTGGCCCGGGACCCATCGTCACCCGCACAGCCTCAGGACCTGCCCTTGCCTTCTGGCAGGCAGTGCTGGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415615.1
3UTR GCA 72 bp AATCAGGAGCCAGGCCAGTACTGGAGTCCGCGAGGATaGGGGAGACACAGCCCACGTCCCCAGCCAGCACTG +
Preference number: 3 (lower is better)
Translates to: NQEPGQYWSPRG*GRHSPRPQPAL
Trigger: CAGTGCTGGCTGGGGACGTGGGCTGTGTCTCCCGCATCCTCGCGGACTCCAGTACTGGCCTGGCTCCTGATT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415615.1
3UTR GCA 72 bp GCTACCTGGCCTGAGTTAGTGCAGAGGCGCGCCCTCTaGAGGCTGGGGCATCTGCTTTCAGGCCCTCTCAAA +
Preference number: 3 (lower is better)
Translates to: ATWPELVQRRAL*RLGHLLSGPLK
Trigger: TTTGAGAGGGCCTGAAAGCAGATGCCCCAGCCTGCAGAGGGCGCGCCTCTGCACTAACTCAGGCCAGGTAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
3UTR-3UTR CAA 90 bp AGCCAGGCCAGTACTGGAGTCCGCGAGGATGCGGGAGACACAGCCCACGTCCCCCACATGACTGTGTTCTaGGGCCAAGGTGTAGGCTAT +
Preference number: 3 (lower is better)
Translates to: SQASTGVREDAGDTAHVPHMTVF*GQGVGY
Trigger: ATAGCCTACACCTTGGCCCAAGAACACAGTCATGTG...GGGGACGTGGGCTGTGTCTCCCGCATCCTCGCGGACTCCAGTACTGGCCTGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415615.1
3UTR TCA 72 bp GTTCTTGGGCCAAGGTGTAGGCTATTGGGCAAGCTTTaGGGTCGGGGAGAAACAGCCGGGGGCTTCTCCTTT +
Preference number: 3 (lower is better)
Translates to: VLGPRCRLLGKL*GRGETAGGFSF
Trigger: AAAGGAGAAGCCCCCGGCTGTTTCTCCCCGACCTCAAAGCTTGCCCAATAGCCTACACCTTGGCCCAAGAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000415615.1
3UTR GCA 72 bp CCAGTAGGAGTGTGTCTTCATCAGACATCACCCGGCTaGCGCTGTCGGTCCGCTTCTCTGCATTGGGAATTG +
Preference number: 3 (lower is better)
Translates to: PVGVCLHQTSPG*RCRSASLHWEL
Trigger: CAATTCCCAATGCAGAGAAGCGGACCGACAGCGGCAGCCGGGTGATGTCTGATGAAGACACACTCCTACTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
3UTR CCA 72 bp CACATGACTGTGTTCTTGGGCCAAGGTGTAGGCTATTaGGCAAGCTTTGAGGTCGGGGAGAAACAGCCGGGG +
Preference number: 3 (lower is better)
Translates to: HMTVFLGQGVGY*ASFEVGEKQPG
Trigger: CCCCGGCTGTTTCTCCCCGACCTCAAAGCTTGCCCAATAGCCTACACCTTGGCCCAAGAACACAGTCATGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415615.1
3UTR CCA 72 bp AGCACGGATGTTGAAGCGGAAATCCCTCCATCGCTCTaGGTCGCTGGTATCAAAGACGGAATCAGGAGCCAG +
Preference number: 3 (lower is better)
Translates to: STDVEAEIPPSL*VAGIKDGIRSQ
Trigger: CTGGCTCCTGATTCCGTCTTTGATACCAGCGACCCAGAGCGATGGAGGGATTTCCGCTTCAACATCCGTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415615.1
3UTR-3UTR CAA 90 bp TGGAGATTTTTAATGCACATACAGGGTTTGCACAGGCTAGAAGGGGGCCTCAGGTCTCTGCATTGGGAATaGCAGCATCCACACCTGCCT +
Preference number: 3 (lower is better)
Translates to: WRFLMHIQGLHRLEGGLRSLHWE*QHPHLP
Trigger: AGGCAGGTGTGGATGCTGCAATTCCCAATGCAGAGA...CCTGAGGCCCCCTTCTAGCCTGTGCAAACCCTGTATGTGCATTAAAAATCTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
3UTR-3UTR CAA 90 bp ACAGACCTGGAGATTTTTAATGCACATACAGGGTTTGCACAGGCTAGAAGGGGGGTCCGCTTCTCTGCATaGGGAATTGCAGCATCCACA +
Preference number: 3 (lower is better)
Translates to: TDLEIFNAHTGFAQARRGVRFSA*GIAAST
Trigger: TGTGGATGCTGCAATTCCCAATGCAGAGAAGCGGAC...CCCCCTTCTAGCCTGTGCAAACCCTGTATGTGCATTAAAAATCTCCAGGTCTGT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR CCA 90 bp GCTGCCAGGGCTACCTGGCCTGAGTTAGTGCAGAGGCGCGCCCTCTGCAGGCTGCTTGGGGAGGGCCCCTaGCCAGACACGGACGGCGCC +
Preference number: 4 (lower is better)
Translates to: AARATWPELVQRRALCRLLGEGP*PDTDGA
Trigger: GGCGCCGTCCGTGTCTGGCCAGGGGCCCTCCCCAAG...CAGCCTGCAGAGGGCGCGCCTCTGCACTAACTCAGGCCAGGTAGCCCTGGCAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR TCA 90 bp GCTGCCAGGGCTACCTGGCCTGAGTTAGTGCAGAGGCGCGCCCTCTGCAGGCTGCTGAGGCTGTGCGGGTaGCGATGGGTCCCGGGCCAG +
Preference number: 4 (lower is better)
Translates to: AARATWPELVQRRALCRLLRLCG*RWVPGQ
Trigger: CTGGCCCGGGACCCATCGTCACCCGCACAGCCTCAG...CAGCCTGCAGAGGGCGCGCCTCTGCACTAACTCAGGCCAGGTAGCCCTGGCAGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275838.5
ENST00000420175.3
CDS-3UTR GCA 90 bp GAGGCGCGCCCTCTGCAGGCTGGGGCATCTGCTTTCAGGCCCTCTCAAAAGGCCGCAGCACAGGCCTCGTaGAGGGCGGTGCGGCCCCCA +
Preference number: 4 (lower is better)
Translates to: EARPLQAGASAFRPSQKAAAQAS*RAVRPP
Trigger: TGGGGGCCGCACCGCCCTGCACGAGGCCTGTGCTGC...GGCCTTTTGAGAGGGCCTGAAAGCAGATGCCCCAGCCTGCAGAGGGCGCGCCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR GCA 90 bp AGTGCAGAGGCGCGCCCTCTGCAGGCTGGGGCATCTGCTTTCAGGCCCTCTCAACCTCGTGCAGGGCGGTaGGGCCCCCAGGGGCACTGT +
Preference number: 4 (lower is better)
Translates to: SAEARPLQAGASAFRPSQPRAGR*GPQGHC
Trigger: ACAGTGCCCCTGGGGGCCGCACCGCCCTGCACGAGG...TTGAGAGGGCCTGAAAGCAGATGCCCCAGCCTGCAGAGGGCGCGCCTCTGCACT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR GCA 90 bp AGGGCTACCTGGCCTGAGTTAGTGCAGAGGCGCGCCCTCTGCAGGCTGGGGCATCGGCGGCAGGCCAGGTaGAGGGGTCGCTGCTTGTCC +
Preference number: 4 (lower is better)
Translates to: RATWPELVQRRALCRLGHRRQAR*RGRCLS
Trigger: GGACAAGCAGCGACCCCTGCACCTGGCCTGCCGCCG...ATGCCCCAGCCTGCAGAGGGCGCGCCTCTGCACTAACTCAGGCCAGGTAGCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR GCA 90 bp AGCCAGGCCAGTACTGGAGTCCGCGAGGATGCGGGAGACACAGCCCACGTCCCCCACCCCTCTGGTGGCTaGTCCAGCGAGGCTCTGCGG +
Preference number: 4 (lower is better)
Translates to: SQASTGVREDAGDTAHVPHPSGG*SSEALR
Trigger: CCGCAGAGCCTCGCTGGAGCAGCCACCAGAGGGGTG...GGGGACGTGGGCTGTGTCTCCCGCATCCTCGCGGACTCCAGTACTGGCCTGGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000415615.1
CDS-3UTR CCA 90 bp AGGGCTACCTGGCCTGAGTTAGTGCAGAGGCGCGCCCTCTGCAGGCTGGGGCATCAGGCTGGGCGGGAGTaGGGCCTCCAGATCCGGCAG +
Preference number: 4 (lower is better)
Translates to: RATWPELVQRRALCRLGHQAGRE*GLQIRQ
Trigger: CTGCCGGATCTGGAGGCCCCACTCCCGCCCAGCCTG...ATGCCCCAGCCTGCAGAGGGCGCGCCTCTGCACTAACTCAGGCCAGGTAGCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377867.7
CDS-3UTR TCA 90 bp GCTGCCAGGGCTACCTGGCCTGAGTTAGTGCAGAGGCGCGCCCTCTGCAGGCTGGGACGGCGCCATGGTTaGGCAGAGCCCGAACCACGT +
Preference number: 4 (lower is better)
Translates to: AARATWPELVQRRALCRLGRRHG*AEPEPR
Trigger: ACGTGGTTCGGGCTCTGCTCAACCATGGCGCCGTCC...CAGCCTGCAGAGGGCGCGCCTCTGCACTAACTCAGGCCAGGTAGCCCTGGCAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR GCA 90 bp GCTGCCAGGGCTACCTGGCCTGAGTTAGTGCAGAGGCGCGCCCTCTGCAGGCTGCGGCTGGCTGCCACATaGAGTGGGGTGGTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: AARATWPELVQRRALCRLRLAAT*SGVVSS
Trigger: GGAGCTGACCACCCCACTGCATGTGGCAGCCAGCCG...CAGCCTGCAGAGGGCGCGCCTCTGCACTAACTCAGGCCAGGTAGCCCTGGCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR GCA 90 bp GAGGCGCGCCCTCTGCAGGCTGGGGCATCTGCTTTCAGGCCCTCTCAAAAGGCCCAGCTCCACGACAGCTaGATGGCCACGGCGGCAGGC +
Preference number: 4 (lower is better)
Translates to: EARPLQAGASAFRPSQKAQLHDS*MATAAG
Trigger: GCCTGCCGCCGTGGCCATGCAGCTGTCGTGGAGCTG...GGCCTTTTGAGAGGGCCTGAAAGCAGATGCCCCAGCCTGCAGAGGGCGCGCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR GCA 90 bp CCTGCTGCCAGGGCTACCTGGCCTGAGTTAGTGCAGAGGCGCGCCCTCTGCAGGCAGAGGCGCGCCCTCTaGAGGCTGGGGCATCTGCTT +
Preference number: 4 (lower is better)
Translates to: PAARATWPELVQRRALCRQRRAL*RLGHLL
Trigger: AAGCAGATGCCCCAGCCTGCAGAGGGCGCGCCTCTG...CCTGCAGAGGGCGCGCCTCTGCACTAACTCAGGCCAGGTAGCCCTGGCAGCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR GCA 90 bp CGCGCCCTCTGCAGGCTGGGGCATCTGCTTTCAGGCCCTCTCAAAAGGCCATGGGCTCCAGCGAGGCTCTaGGGCCCGGCTCTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: RALCRLGHLLSGPLKRPWAPARL*GPALQQ
Trigger: CTGCTGGAGAGCCGGGCCGCAGAGCCTCGCTGGAGC...CCATGGCCTTTTGAGAGGGCCTGAAAGCAGATGCCCCAGCCTGCAGAGGGCGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377867.7
CDS-3UTR CCA 90 bp GGTCCTGAGGCTGTGCGGGTGACGATGGGTCCCGGGCCAGACTTGAGGTGCTCCCCCTCACCCCTCTGGTaGCTGCTCCAGCGAGGCTCT +
Preference number: 4 (lower is better)
Translates to: GPEAVRVTMGPGPDLRCSPSPLW*LLQRGS
Trigger: AGAGCCTCGCTGGAGCAGCCACCAGAGGGGTGAGGG...GGAGCACCTCAAGTCTGGCCCGGGACCCATCGTCACCCGCACAGCCTCAGGACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000415615.1
CDS-3UTR TCA 90 bp AGGGCTACCTGGCCTGAGTTAGTGCAGAGGCGCGCCCTCTGCAGGCTGGGGCATGTCCCGGGCCAGACTTaGGGTGCTCCTCAGACCCTC +
Preference number: 4 (lower is better)
Translates to: RATWPELVQRRALCRLGHVPGQT*GAPQTL
Trigger: GAGGGTCTGAGGAGCACCTCAAGTCTGGCCCGGGAC...ATGCCCCAGCCTGCAGAGGGCGCGCCTCTGCACTAACTCAGGCCAGGTAGCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275838.5
ENST00000420175.3
CDS-3UTR TCA 90 bp AGGGCTACCTGGCCTGAGTTAGTGCAGAGGCGCGCCCTCTGCAGGCTGGGGCATTGGCCTCGGCATCGGTaGTGGACTGGCAGCGGACGT +
Preference number: 4 (lower is better)
Translates to: RATWPELVQRRALCRLGHWPRHR*WTGSGR
Trigger: ACGTCCGCTGCCAGTCCATCACCGATGCCGAGGCCA...ATGCCCCAGCCTGCAGAGGGCGCGCCTCTGCACTAACTCAGGCCAGGTAGCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR TCA 90 bp AGGGCTACCTGGCCTGAGTTAGTGCAGAGGCGCGCCCTCTGCAGGCTGGGGCATCAGGGCTACCTGGCCTaGGTTAGTGCAGAGGCGCGC +
Preference number: 4 (lower is better)
Translates to: RATWPELVQRRALCRLGHQGYLA*VSAEAR
Trigger: GCGCGCCTCTGCACTAACTCAGGCCAGGTAGCCCTG...ATGCCCCAGCCTGCAGAGGGCGCGCCTCTGCACTAACTCAGGCCAGGTAGCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR GCA 90 bp CAGAAGGCAAGGGCAGGTCCTGAGGCTGTGCGGGTGACGATGGGTCCCGGGCCATGGAGTCCGCGAGGATaGGGGAGACACAGCCCACGT +
Preference number: 4 (lower is better)
Translates to: QKARAGPEAVRVTMGPGPWSPRG*GRHSPR
Trigger: ACGTGGGCTGTGTCTCCCGCATCCTCGCGGACTCCA...TGGCCCGGGACCCATCGTCACCCGCACAGCCTCAGGACCTGCCCTTGCCTTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415615.1
CDS-3UTR GCA 90 bp CGGTCCGCTTCTCTGCATTGGGAATTGCAGCATCCACACCTGCCTGCGGAGCTGCCTCGTGCAGGGCGGTaGGGCCCCCAGGGGCACTGT +
Preference number: 4 (lower is better)
Translates to: RSASLHWELQHPHLPAELPRAGR*GPQGHC
Trigger: ACAGTGCCCCTGGGGGCCGCACCGCCCTGCACGAGG...CAGCTCCGCAGGCAGGTGTGGATGCTGCAATTCCCAATGCAGAGAAGCGGACCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR GCA 90 bp CGGTCCGCTTCTCTGCATTGGGAATTGCAGCATCCACACCTGCCTGCGGAGCTGGCAGCACAGGCCTCGTaGAGGGCGGTGCGGCCCCCA +
Preference number: 4 (lower is better)
Translates to: RSASLHWELQHPHLPAELAAQAS*RAVRPP
Trigger: TGGGGGCCGCACCGCCCTGCACGAGGCCTGTGCTGC...CAGCTCCGCAGGCAGGTGTGGATGCTGCAATTCCCAATGCAGAGAAGCGGACCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR GCA 90 bp CGCGCCCTCTGCAGGCTGGGGCATCTGCTTTCAGGCCCTCTCAAAAGGCCATGGAGAGCCCGAACCACGTaGTCGGGGCTCTGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: RALCRLGHLLSGPLKRPWRARTT*SGLWAR
Trigger: CCTGGCCCAGAGCCCCGAGCACGTGGTTCGGGCTCT...CCATGGCCTTTTGAGAGGGCCTGAAAGCAGATGCCCCAGCCTGCAGAGGGCGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR GCA 90 bp CCTGCTGCCAGGGCTACCTGGCCTGAGTTAGTGCAGAGGCGCGCCCTCTGCAGGTGCAGCGACCTGGGCTaGCTCACCAAGGCGAAGAGG +
Preference number: 4 (lower is better)
Translates to: PAARATWPELVQRRALCRCSDLG*LTKAKR
Trigger: CCTCTTCGCCTTGGTGAGGCAGCCCAGGTCGCTGCA...CCTGCAGAGGGCGCGCCTCTGCACTAACTCAGGCCAGGTAGCCCTGGCAGCAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR GCA 90 bp CCTGCTGCCAGGGCTACCTGGCCTGAGTTAGTGCAGAGGCGCGCCCTCTGCAGGGCACAGCGGCTCAAATaGTGCAGCGACCTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: PAARATWPELVQRRALCRAQRLK*CSDLGC
Trigger: GCAGCCCAGGTCGCTGCAGCATTTGAGCCGCTGTGC...CCTGCAGAGGGCGCGCCTCTGCACTAACTCAGGCCAGGTAGCCCTGGCAGCAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR GCA 90 bp AATCAGGAGCCAGGCCAGTACTGGAGTCCGCGAGGATGCGGGAGACACAGCCCAGCTCCAGCGAGGCTCTaGGGCCCGGCTCTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: NQEPGQYWSPRGCGRHSPAPARL*GPALQQ
Trigger: CTGCTGGAGAGCCGGGCCGCAGAGCCTCGCTGGAGC...TGGGCTGTGTCTCCCGCATCCTCGCGGACTCCAGTACTGGCCTGGCTCCTGATT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415615.1
CDS-3UTR CCA 90 bp GAGGCGCGCCCTCTGCAGGCTGGGGCATCTGCTTTCAGGCCCTCTCAAAAGGCCCGCAGGACTTCCGTGTaGCCACGGCTGGCTGCCACA +
Preference number: 4 (lower is better)
Translates to: EARPLQAGASAFRPSQKARRTSV*PRLAAT
Trigger: TGTGGCAGCCAGCCGTGGCCACACGGAAGTCCTGCG...GGCCTTTTGAGAGGGCCTGAAAGCAGATGCCCCAGCCTGCAGAGGGCGCGCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR CCA 90 bp GTGCAGAGGCGCGCCCTCTGCAGGCTGGGGCATCTGCTTTCAGGCCCTCTCAAACCCAGGGGCACTGTCTaGCCTTGCTCGCCGCCTCAG +
Preference number: 4 (lower is better)
Translates to: VQRRALCRLGHLLSGPLKPRGTV*PCSPPQ
Trigger: CTGAGGCGGCGAGCAAGGCCAGACAGTGCCCCTGGG...TTTGAGAGGGCCTGAAAGCAGATGCCCCAGCCTGCAGAGGGCGCGCCTCTGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
3UTR CAA 72 bp GAGGCTGTGCGGGTGACGATGGGTCCCGGGCCAGACTaGAGGTGCTCCTCAGACCCTCTGCTGGGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: EAVRVTMGPGPD*RCSSDPLLGFS
Trigger: GGAGAAGCCCAGCAGAGGGTCTGAGGAGCACCTCAAGTCTGGCCCGGGACCCATCGTCACCCGCACAGCCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415615.1
CDS-3UTR TCA 90 bp GTGCAGAGGCGCGCCCTCTGCAGGCTGGGGCATCTGCTTTCAGGCCCTCTCAAAGTCCCGGGCCAGACTTaGGGTGCTCCTCAGACCCTC +
Preference number: 4 (lower is better)
Translates to: VQRRALCRLGHLLSGPLKVPGQT*GAPQTL
Trigger: GAGGGTCTGAGGAGCACCTCAAGTCTGGCCCGGGAC...TTTGAGAGGGCCTGAAAGCAGATGCCCCAGCCTGCAGAGGGCGCGCCTCTGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275838.5
ENST00000420175.3
CDS-3UTR TCA 90 bp GCTGCCAGGGCTACCTGGCCTGAGTTAGTGCAGAGGCGCGCCCTCTGCAGGCTGCTCTCGCTCCAAACCTaGGGAGCAGCTCCGCACACT +
Preference number: 4 (lower is better)
Translates to: AARATWPELVQRRALCRLLSLQT*GAAPHT
Trigger: AGTGTGCGGAGCTGCTCCTCAGGTTTGGAGCGAGAG...CAGCCTGCAGAGGGCGCGCCTCTGCACTAACTCAGGCCAGGTAGCCCTGGCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR TCA 90 bp CGCGCCCTCTGCAGGCTGGGGCATCTGCTTTCAGGCCCTCTCAAAAGGCCATGGTGGCCTCGGCATCGGTaGTGGACTGGCAGCGGACGT +
Preference number: 4 (lower is better)
Translates to: RALCRLGHLLSGPLKRPWWPRHR*WTGSGR
Trigger: ACGTCCGCTGCCAGTCCATCACCGATGCCGAGGCCA...CCATGGCCTTTTGAGAGGGCCTGAAAGCAGATGCCCCAGCCTGCAGAGGGCGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR TCA 90 bp CGCGCCCTCTGCAGGCTGGGGCATCTGCTTTCAGGCCCTCTCAAAAGGCCATGGCAGGGCTACCTGGCCTaGGTTAGTGCAGAGGCGCGC +
Preference number: 4 (lower is better)
Translates to: RALCRLGHLLSGPLKRPWQGYLA*VSAEAR
Trigger: GCGCGCCTCTGCACTAACTCAGGCCAGGTAGCCCTG...CCATGGCCTTTTGAGAGGGCCTGAAAGCAGATGCCCCAGCCTGCAGAGGGCGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR GCA 90 bp CGCGCCCTCTGCAGGCTGGGGCATCTGCTTTCAGGCCCTCTCAAAAGGCCATGGCGGCTGGCTGCCACATaGAGTGGGGTGGTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: RALCRLGHLLSGPLKRPWRLAAT*SGVVSS
Trigger: GGAGCTGACCACCCCACTGCATGTGGCAGCCAGCCG...CCATGGCCTTTTGAGAGGGCCTGAAAGCAGATGCCCCAGCCTGCAGAGGGCGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR GCA 90 bp CTGTCGGTCCGCTTCTCTGCATTGGGAATTGCAGCATCCACACCTGCCTGCGGACCTCGTGCAGGGCGGTaGGGCCCCCAGGGGCACTGT +
Preference number: 4 (lower is better)
Translates to: LSVRFSALGIAASTPACGPRAGR*GPQGHC
Trigger: ACAGTGCCCCTGGGGGCCGCACCGCCCTGCACGAGG...TCCGCAGGCAGGTGTGGATGCTGCAATTCCCAATGCAGAGAAGCGGACCGACAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR GCA 90 bp GTGTGTCTTCATCAGACATCACCCGGCTGCCGCTGTCGGTCCGCTTCTCTGCATGCAGCACAGGCCTCGTaGAGGGCGGTGCGGCCCCCA +
Preference number: 4 (lower is better)
Translates to: VCLHQTSPGCRCRSASLHAAQAS*RAVRPP
Trigger: TGGGGGCCGCACCGCCCTGCACGAGGCCTGTGCTGC...ATGCAGAGAAGCGGACCGACAGCGGCAGCCGGGTGATGTCTGATGAAGACACAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR GCA 90 bp AGGGCTACCTGGCCTGAGTTAGTGCAGAGGCGCGCCCTCTGCAGGCTGGGGCATACAGGCAGTGTGGCCTaGAGCACAGGCCTCGTGCAG +
Preference number: 4 (lower is better)
Translates to: RATWPELVQRRALCRLGHTGSVA*STGLVQ
Trigger: CTGCACGAGGCCTGTGCTGCAGGCCACACTGCCTGT...ATGCCCCAGCCTGCAGAGGGCGCGCCTCTGCACTAACTCAGGCCAGGTAGCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR GCA 90 bp GCCCTCTGCAGGCTGGGGCATCTGCTTTCAGGCCCTCTCAAAAGGCCATGGACAGACTGGGCAGGTGGGTaGTGGGCCCGAGCTGGGTGG +
Preference number: 4 (lower is better)
Translates to: ALCRLGHLLSGPLKRPWTDWAGG*WARAGW
Trigger: CCACCCAGCTCGGGCCCAGCACCCACCTGCCCAGTC...TGTCCATGGCCTTTTGAGAGGGCCTGAAAGCAGATGCCCCAGCCTGCAGAGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377867.7
CDS-3UTR CCA 90 bp AGTGCAGAGGCGCGCCCTCTGCAGGCTGGGGCATCTGCTTTCAGGCCCTCTCAAGAGCCAGGCCAGTACTaGAGTCCGCGAGGATGCGGG +
Preference number: 4 (lower is better)
Translates to: SAEARPLQAGASAFRPSQEPGQY*SPRGCG
Trigger: CCCGCATCCTCGCGGACTCCAGTACTGGCCTGGCTC...TTGAGAGGGCCTGAAAGCAGATGCCCCAGCCTGCAGAGGGCGCGCCTCTGCACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275838.5
ENST00000420175.3
CDS-3UTR CCA 90 bp AGTGCAGAGGCGCGCCCTCTGCAGGCTGGGGCATCTGCTTTCAGGCCCTCTCAACGCAGGACTTCCGTGTaGCCACGGCTGGCTGCCACA +
Preference number: 4 (lower is better)
Translates to: SAEARPLQAGASAFRPSQRRTSV*PRLAAT
Trigger: TGTGGCAGCCAGCCGTGGCCACACGGAAGTCCTGCG...TTGAGAGGGCCTGAAAGCAGATGCCCCAGCCTGCAGAGGGCGCGCCTCTGCACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR CCA 90 bp CCTGCTGCCAGGGCTACCTGGCCTGAGTTAGTGCAGAGGCGCGCCCTCTGCAGGGCATCGGTGATGGACTaGCAGCGGACGTCACAGGCA +
Preference number: 4 (lower is better)
Translates to: PAARATWPELVQRRALCRASVMD*QRTSQA
Trigger: TGCCTGTGACGTCCGCTGCCAGTCCATCACCGATGC...CCTGCAGAGGGCGCGCCTCTGCACTAACTCAGGCCAGGTAGCCCTGGCAGCAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR CCA 90 bp GAGGCGCGCCCTCTGCAGGCTGGGGCATCTGCTTTCAGGCCCTCTCAAAAGGCCACACGGACGGCGCCATaGTTGAGCAGAGCCCGAACC +
Preference number: 4 (lower is better)
Translates to: EARPLQAGASAFRPSQKATRTAP*LSRART
Trigger: GGTTCGGGCTCTGCTCAACCATGGCGCCGTCCGTGT...GGCCTTTTGAGAGGGCCTGAAAGCAGATGCCCCAGCCTGCAGAGGGCGCGCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR CCA 90 bp AGGAGAGCCCCAGTAGGAGTGTGTCTTCATCAGACATCACCCGGCTGCCGCTGTCTTGGGGAGGGCCCCTaGCCAGACACGGACGGCGCC +
Preference number: 4 (lower is better)
Translates to: RRAPVGVCLHQTSPGCRCLGEGP*PDTDGA
Trigger: GGCGCCGTCCGTGTCTGGCCAGGGGCCCTCCCCAAG...ACAGCGGCAGCCGGGTGATGTCTGATGAAGACACACTCCTACTGGGGCTCTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR CCA 90 bp GCTGCCAGGGCTACCTGGCCTGAGTTAGTGCAGAGGCGCGCCCTCTGCAGGCTGAATGCTGCAGCGACCTaGGCTGCCTCACCAAGGCGA +
Preference number: 4 (lower is better)
Translates to: AARATWPELVQRRALCRLNAAAT*AASPRR
Trigger: TCGCCTTGGTGAGGCAGCCCAGGTCGCTGCAGCATT...CAGCCTGCAGAGGGCGCGCCTCTGCACTAACTCAGGCCAGGTAGCCCTGGCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR CCA 90 bp AGCCCCAGTAGGAGTGTGTCTTCATCAGACATCACCCGGCTGCCGCTGTCGGTCAGGCTGCCCTCCAGGTaGGAGCGGAGCGCACAGCGG +
Preference number: 4 (lower is better)
Translates to: SPSRSVSSSDITRLPLSVRLPSR*ERSAQR
Trigger: CCGCTGTGCGCTCCGCTCCCACCTGGAGGGCAGCCT...GACCGACAGCGGCAGCCGGGTGATGTCTGATGAAGACACACTCCTACTGGGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR CCA 90 bp AGGAGAGCCCCAGTAGGAGTGTGTCTTCATCAGACATCACCCGGCTGCCGCTGTAGGCGGGGCAGCGCTTaGGGCAGGCTGCCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: RRAPVGVCLHQTSPGCRCRRGSA*GRLPSR
Trigger: CCTGGAGGGCAGCCTGCCCCAAGCGCTGCCCCGCCT...ACAGCGGCAGCCGGGTGATGTCTGATGAAGACACACTCCTACTGGGGCTCTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR CCA 90 bp GTGCAGAGGCGCGCCCTCTGCAGGCTGGGGCATCTGCTTTCAGGCCCTCTCAAAGCGCCCTCTGCAGGCTaGGGCATCTGCTTTCAGGCC +
Preference number: 4 (lower is better)
Translates to: VQRRALCRLGHLLSGPLKAPSAG*GICFQA
Trigger: GGCCTGAAAGCAGATGCCCCAGCCTGCAGAGGGCGC...TTTGAGAGGGCCTGAAAGCAGATGCCCCAGCCTGCAGAGGGCGCGCCTCTGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR CCA 90 bp TGTCTTCATCAGACATCACCCGGCTGCCGCTGTCGGTCCGCTTCTCTGCATTGGTGGGCCCGAGCTGGGTaGGGCCCAGCATGGGAGGCG +
Preference number: 4 (lower is better)
Translates to: CLHQTSPGCRCRSASLHWWARAG*GPAWEA
Trigger: CGCCTCCCATGCTGGGCCCCACCCAGCTCGGGCCCA...CCAATGCAGAGAAGCGGACCGACAGCGGCAGCCGGGTGATGTCTGATGAAGACA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377867.7
CDS-3UTR CCA 90 bp GGCCAAGGTGTAGGCTATTGGGCAAGCTTTGAGGTCGGGGAGAAACAGCCGGGGCAGGCTGGGCGGGAGTaGGGCCTCCAGATCCGGCAG +
Preference number: 4 (lower is better)
Translates to: GQGVGYWASFEVGEKQPGQAGRE*GLQIRQ
Trigger: CTGCCGGATCTGGAGGCCCCACTCCCGCCCAGCCTG...CCCCGGCTGTTTCTCCCCGACCTCAAAGCTTGCCCAATAGCCTACACCTTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415615.1
CDS-3UTR TCA 90 bp CAGCCTGGCCACGCATCCAGCAGGAGCTATTCTGGGCTCCACATGACTGTGTTCCTGAGGCTGTGCGGGTaGCGATGGGTCCCGGGCCAG +
Preference number: 4 (lower is better)
Translates to: QPGHASSRSYSGLHMTVFLRLCG*RWVPGQ
Trigger: CTGGCCCGGGACCCATCGTCACCCGCACAGCCTCAG...GAACACAGTCATGTGGAGCCCAGAATAGCTCCTGCTGGATGCGTGGCCAGGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415615.1
CDS-3UTR TCA 90 bp AGGGCTACCTGGCCTGAGTTAGTGCAGAGGCGCGCCCTCTGCAGGCTGGGGCATCTCTCGCTCCAAACCTaGGGAGCAGCTCCGCACACT +
Preference number: 4 (lower is better)
Translates to: RATWPELVQRRALCRLGHLSLQT*GAAPHT
Trigger: AGTGTGCGGAGCTGCTCCTCAGGTTTGGAGCGAGAG...ATGCCCCAGCCTGCAGAGGGCGCGCCTCTGCACTAACTCAGGCCAGGTAGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR TCA 90 bp GAGGCGCGCCCTCTGCAGGCTGGGGCATCTGCTTTCAGGCCCTCTCAAAAGGCCCCATGGTGTTGGCGCTaGCACCACAGGACAGGAGCA +
Preference number: 4 (lower is better)
Translates to: EARPLQAGASAFRPSQKAPWCWR*HHRTGA
Trigger: TGCTCCTGTCCTGTGGTGTCAGCGCCAACACCATGG...GGCCTTTTGAGAGGGCCTGAAAGCAGATGCCCCAGCCTGCAGAGGGCGCGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR GCA 90 bp GTCTTCATCAGACATCACCCGGCTGCCGCTGTCGGTCCGCTTCTCTGCATTGGGGGCCCCCGGCAGAGATaGAGGGGGCGTTTCCCATCC +
Preference number: 4 (lower is better)
Translates to: VFIRHHPAAAVGPLLCIGGPRQR*RGRFPS
Trigger: GGATGGGAAACGCCCCCTGCATCTCTGCCGGGGGCC...CCCAATGCAGAGAAGCGGACCGACAGCGGCAGCCGGGTGATGTCTGATGAAGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR GCA 90 bp GAGGCGCGCCCTCTGCAGGCTGGGGCATCTGCTTTCAGGCCCTCTCAAAAGGCCAGCCGGGCGGCCACATaGAAAGGGGTCTCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: EARPLQAGASAFRPSQKASRAAT*KGVSSS
Trigger: AGAAGAGGAGACCCCTTTGCATGTGGCCGCCCGGCT...GGCCTTTTGAGAGGGCCTGAAAGCAGATGCCCCAGCCTGCAGAGGGCGCGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR GCA 90 bp AGTGCAGAGGCGCGCCCTCTGCAGGCTGGGGCATCTGCTTTCAGGCCCTCTCAACAGCGGCTCAAATGCTaGAGCGACCTGGGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: SAEARPLQAGASAFRPSQQRLKC*SDLGCL
Trigger: GAGGCAGCCCAGGTCGCTGCAGCATTTGAGCCGCTG...TTGAGAGGGCCTGAAAGCAGATGCCCCAGCCTGCAGAGGGCGCGCCTCTGCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR GCA 90 bp CCCGGGCCAGACTTGAGGTGCTCCTCAGACCCTCTGCTGGGCTTCTCCACCAGCCAGCTCCTGCAACCTTaGCAGGTCCCCGGTGTAGAG +
Preference number: 4 (lower is better)
Translates to: PGPDLRCSSDPLLGFSTSQLLQP*QVPGVE
Trigger: CTCTACACCGGGGACCTGGCAAGGTTGCAGGAGCTG...GCTGGTGGAGAAGCCCAGCAGAGGGTCTGAGGAGCACCTCAAGTCTGGCCCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415615.1
CDS-3UTR CCA 90 bp AGGGCTACCTGGCCTGAGTTAGTGCAGAGGCGCGCCCTCTGCAGGCTGGGGCATGGCTGCCACATGCAGTaGGGTGGTCAGCTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: RATWPELVQRRALCRLGHGCHMQ*GGQLLF
Trigger: GAAGAGGAGCTGACCACCCCACTGCATGTGGCAGCC...ATGCCCCAGCCTGCAGAGGGCGCGCCTCTGCACTAACTCAGGCCAGGTAGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR CCA 90 bp CGGTCCGCTTCTCTGCATTGGGAATTGCAGCATCCACACCTGCCTGCGGAGCTGCCGTGTGGCCACGGCTaGCTGCCACATGCAGTGGGG +
Preference number: 4 (lower is better)
Translates to: RSASLHWELQHPHLPAELPCGHG*LPHAVG
Trigger: CCCCACTGCATGTGGCAGCCAGCCGTGGCCACACGG...CAGCTCCGCAGGCAGGTGTGGATGCTGCAATTCCCAATGCAGAGAAGCGGACCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR CCA 90 bp ATCACCCGGCTGCCGCTGTCGGTCCGCTTCTCTGCATTGGGAATTGCAGCATCCCCGTGTGGCCACGGCTaGCTGCCACATGCAGTGGGG +
Preference number: 4 (lower is better)
Translates to: ITRLPLSVRFSALGIAASPCGHG*LPHAVG
Trigger: CCCCACTGCATGTGGCAGCCAGCCGTGGCCACACGG...GGATGCTGCAATTCCCAATGCAGAGAAGCGGACCGACAGCGGCAGCCGGGTGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR CCA 90 bp CGCGCCCTCTGCAGGCTGGGGCATCTGCTTTCAGGCCCTCTCAAAAGGCCATGGCCTGGTCAGCGATGTTaGGGTCGGCTCCTGCCACCA +
Preference number: 4 (lower is better)
Translates to: RALCRLGHLLSGPLKRPWPGQRC*GRLLPP
Trigger: TGGTGGCAGGAGCCGACCCCAACATCGCTGACCAGG...CCATGGCCTTTTGAGAGGGCCTGAAAGCAGATGCCCCAGCCTGCAGAGGGCGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR CCA 90 bp ATCAGACATCACCCGGCTGCCGCTGTCGGTCCGCTTCTCTGCATTGGGAATTGCACGTGCTCGGGGCTCTaGGCCAGGGCTGCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: IRHHPAAAVGPLLCIGNCTCSGL*ARAAAG
Trigger: CCCAGCTGCAGCCCTGGCCCAGAGCCCCGAGCACGT...GCAATTCCCAATGCAGAGAAGCGGACCGACAGCGGCAGCCGGGTGATGTCTGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR CCA 90 bp GTGCAGAGGCGCGCCCTCTGCAGGCTGGGGCATCTGCTTTCAGGCCCTCTCAAAACACGGACGGCGCCATaGTTGAGCAGAGCCCGAACC +
Preference number: 4 (lower is better)
Translates to: VQRRALCRLGHLLSGPLKTRTAP*LSRART
Trigger: GGTTCGGGCTCTGCTCAACCATGGCGCCGTCCGTGT...TTTGAGAGGGCCTGAAAGCAGATGCCCCAGCCTGCAGAGGGCGCGCCTCTGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR CCA 90 bp AGGGCTACCTGGCCTGAGTTAGTGCAGAGGCGCGCCCTCTGCAGGCTGGGGCATAATGCTGCAGCGACCTaGGCTGCCTCACCAAGGCGA +
Preference number: 4 (lower is better)
Translates to: RATWPELVQRRALCRLGHNAAAT*AASPRR
Trigger: TCGCCTTGGTGAGGCAGCCCAGGTCGCTGCAGCATT...ATGCCCCAGCCTGCAGAGGGCGCGCCTCTGCACTAACTCAGGCCAGGTAGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR CCA 90 bp TCATCAGACATCACCCGGCTGCCGCTGTCGGTCCGCTTCTCTGCATTGGGAATTAGGCGGGGCAGCGCTTaGGGCAGGCTGCCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: SSDITRLPLSVRFSALGIRRGSA*GRLPSR
Trigger: CCTGGAGGGCAGCCTGCCCCAAGCGCTGCCCCGCCT...AATTCCCAATGCAGAGAAGCGGACCGACAGCGGCAGCCGGGTGATGTCTGATGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR CCA 90 bp TGTCTTCATCAGACATCACCCGGCTGCCGCTGTCGGTCCGCTTCTCTGCATTGGACCTGCCTGCGGAGCTaGGCCTCCTGCTGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: CLHQTSPGCRCRSASLHWTCLRS*ASCCQG
Trigger: GCCCTGGCAGCAGGAGGCCCAGCTCCGCAGGCAGGT...CCAATGCAGAGAAGCGGACCGACAGCGGCAGCCGGGTGATGTCTGATGAAGACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR CCA 90 bp CTGTCGGTCCGCTTCTCTGCATTGGGAATTGCAGCATCCACACCTGCCTGCGGAACCTGCCTGCGGAGCTaGGCCTCCTGCTGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: LSVRFSALGIAASTPACGTCLRS*ASCCQG
Trigger: GCCCTGGCAGCAGGAGGCCCAGCTCCGCAGGCAGGT...TCCGCAGGCAGGTGTGGATGCTGCAATTCCCAATGCAGAGAAGCGGACCGACAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR CCA 90 bp TGTCGGTCCGCTTCTCTGCATTGGGAATTGCAGCATCCACACCTGCCTGCGGAGACCTGCCTGCGGAGCTaGGCCTCCTGCTGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: CRSASLHWELQHPHLPAETCLRS*ASCCQG
Trigger: GCCCTGGCAGCAGGAGGCCCAGCTCCGCAGGCAGGT...CTCCGCAGGCAGGTGTGGATGCTGCAATTCCCAATGCAGAGAAGCGGACCGACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR TCA 90 bp TCCGCTTCTCTGCATTGGGAATTGCAGCATCCACACCTGCCTGCGGAGCTGGGCGGACGGCGCCATGGTTaGGCAGAGCCCGAACCACGT +
Preference number: 4 (lower is better)
Translates to: SASLHWELQHPHLPAELGGRRHG*AEPEPR
Trigger: ACGTGGTTCGGGCTCTGCTCAACCATGGCGCCGTCC...GCCCAGCTCCGCAGGCAGGTGTGGATGCTGCAATTCCCAATGCAGAGAAGCGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR GCA 90 bp AGGGCTACCTGGCCTGAGTTAGTGCAGAGGCGCGCCCTCTGCAGGCTGGGGCATGCTCTCCCTGCCCCTTaGACTCTTCTGGAGACCAAC +
Preference number: 4 (lower is better)
Translates to: RATWPELVQRRALCRLGHALPAP*TLLETN
Trigger: GTTGGTCTCCAGAAGAGTGCAAGGGGCAGGGAGAGC...ATGCCCCAGCCTGCAGAGGGCGCGCCTCTGCACTAACTCAGGCCAGGTAGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275838.5
ENST00000420175.3
CDS-3UTR GCA 90 bp ATCACCCGGCTGCCGCTGTCGGTCCGCTTCTCTGCATTGGGAATTGCAGCATCCGTGGCCACGGCTGGCTaGCACATGCAGTGGGGTGGT +
Preference number: 4 (lower is better)
Translates to: ITRLPLSVRFSALGIAASVATAG*HMQWGG
Trigger: ACCACCCCACTGCATGTGGCAGCCAGCCGTGGCCAC...GGATGCTGCAATTCCCAATGCAGAGAAGCGGACCGACAGCGGCAGCCGGGTGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR GCA 90 bp ATCACCCGGCTGCCGCTGTCGGTCCGCTTCTCTGCATTGGGAATTGCAGCATCCCCGCACACTCAAGGGTaGCAGGCCCCCGGCAGAGAT +
Preference number: 4 (lower is better)
Translates to: ITRLPLSVRFSALGIAASPHTQG*QAPGRD
Trigger: ATCTCTGCCGGGGGCCTGGCACCCTTGAGTGTGCGG...GGATGCTGCAATTCCCAATGCAGAGAAGCGGACCGACAGCGGCAGCCGGGTGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR GCA 90 bp GTCTTCATCAGACATCACCCGGCTGCCGCTGTCGGTCCGCTTCTCTGCATTGGGCCCTGCAGAGCACAGTaGAGGGGCGTGTGTCCCCCA +
Preference number: 4 (lower is better)
Translates to: VFIRHHPAAAVGPLLCIGPCRAQ*RGVCPP
Trigger: TGGGGGACACACGCCCCTGCACTGTGCTCTGCAGGG...CCCAATGCAGAGAAGCGGACCGACAGCGGCAGCCGGGTGATGTCTGATGAAGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR GCA 90 bp TGTCGGTCCGCTTCTCTGCATTGGGAATTGCAGCATCCACACCTGCCTGCGGAGAGAGCCCGAACCACGTaGTCGGGGCTCTGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: CRSASLHWELQHPHLPAERARTT*SGLWAR
Trigger: CCTGGCCCAGAGCCCCGAGCACGTGGTTCGGGCTCT...CTCCGCAGGCAGGTGTGGATGCTGCAATTCCCAATGCAGAGAAGCGGACCGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR GCA 90 bp CGCGCCCTCTGCAGGCTGGGGCATCTGCTTTCAGGCCCTCTCAAAAGGCCATGGGACTCCCAGCGATGTTaGTGGTGGACTGGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: RALCRLGHLLSGPLKRPWDSQRC*WWTGQV
Trigger: CACCTGCCCAGTCCACCAGCAACATCGCTGGGAGTC...CCATGGCCTTTTGAGAGGGCCTGAAAGCAGATGCCCCAGCCTGCAGAGGGCGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377867.7
CDS-3UTR CCA 90 bp AGCCCCAGTAGGAGTGTGTCTTCATCAGACATCACCCGGCTGCCGCTGTCGGTCGAGCCAGGCCAGTACTaGAGTCCGCGAGGATGCGGG +
Preference number: 4 (lower is better)
Translates to: SPSRSVSSSDITRLPLSVEPGQY*SPRGCG
Trigger: CCCGCATCCTCGCGGACTCCAGTACTGGCCTGGCTC...GACCGACAGCGGCAGCCGGGTGATGTCTGATGAAGACACACTCCTACTGGGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275838.5
ENST00000420175.3
CDS-3UTR CCA 90 bp AGGAGAGCCCCAGTAGGAGTGTGTCTTCATCAGACATCACCCGGCTGCCGCTGTCCCAGGGGCACTGTCTaGCCTTGCTCGCCGCCTCAG +
Preference number: 4 (lower is better)
Translates to: RRAPVGVCLHQTSPGCRCPRGTV*PCSPPQ
Trigger: CTGAGGCGGCGAGCAAGGCCAGACAGTGCCCCTGGG...ACAGCGGCAGCCGGGTGATGTCTGATGAAGACACACTCCTACTGGGGCTCTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR CCA 90 bp TGTCGGTCCGCTTCTCTGCATTGGGAATTGCAGCATCCACACCTGCCTGCGGAGCCCAGGGGCACTGTCTaGCCTTGCTCGCCGCCTCAG +
Preference number: 4 (lower is better)
Translates to: CRSASLHWELQHPHLPAEPRGTV*PCSPPQ
Trigger: CTGAGGCGGCGAGCAAGGCCAGACAGTGCCCCTGGG...CTCCGCAGGCAGGTGTGGATGCTGCAATTCCCAATGCAGAGAAGCGGACCGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR CCA 90 bp ATCACCCGGCTGCCGCTGTCGGTCCGCTTCTCTGCATTGGGAATTGCAGCATCCTCTGCCAGCTCCACATaGCCAAGCCGGGCGGCCACA +
Preference number: 4 (lower is better)
Translates to: ITRLPLSVRFSALGIAASSASST*PSRAAT
Trigger: TGTGGCCGCCCGGCTTGGCCATGTGGAGCTGGCAGA...GGATGCTGCAATTCCCAATGCAGAGAAGCGGACCGACAGCGGCAGCCGGGTGAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR CCA 90 bp AGTGCAGAGGCGCGCCCTCTGCAGGCTGGGGCATCTGCTTTCAGGCCCTCTCAAGCATCGGTGATGGACTaGCAGCGGACGTCACAGGCA +
Preference number: 4 (lower is better)
Translates to: SAEARPLQAGASAFRPSQASVMD*QRTSQA
Trigger: TGCCTGTGACGTCCGCTGCCAGTCCATCACCGATGC...TTGAGAGGGCCTGAAAGCAGATGCCCCAGCCTGCAGAGGGCGCGCCTCTGCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR CCA 90 bp TCATCAGACATCACCCGGCTGCCGCTGTCGGTCCGCTTCTCTGCATTGGGAATTACGTGCTCGGGGCTCTaGGCCAGGGCTGCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: SSDITRLPLSVRFSALGITCSGL*ARAAAG
Trigger: CCCAGCTGCAGCCCTGGCCCAGAGCCCCGAGCACGT...AATTCCCAATGCAGAGAAGCGGACCGACAGCGGCAGCCGGGTGATGTCTGATGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR CCA 90 bp CGCGCCCTCTGCAGGCTGGGGCATCTGCTTTCAGGCCCTCTCAAAAGGCCATGGGCTGCCAGGGCTACCTaGCCTGAGTTAGTGCAGAGG +
Preference number: 4 (lower is better)
Translates to: RALCRLGHLLSGPLKRPWAARAT*PELVQR
Trigger: CCTCTGCACTAACTCAGGCCAGGTAGCCCTGGCAGC...CCATGGCCTTTTGAGAGGGCCTGAAAGCAGATGCCCCAGCCTGCAGAGGGCGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR CCA 90 bp AGGGCTACCTGGCCTGAGTTAGTGCAGAGGCGCGCCCTCTGCAGGCTGGGGCATGGGCATGGCTTGTTCTaGGAGAGCCAAAGCAGCACG +
Preference number: 4 (lower is better)
Translates to: RATWPELVQRRALCRLGHGHGLF*ESQSST
Trigger: CGTGCTGCTTTGGCTCTCCCAGAACAAGCCATGCCC...ATGCCCCAGCCTGCAGAGGGCGCGCCTCTGCACTAACTCAGGCCAGGTAGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377867.7
CDS-3UTR CCA 90 bp CGCGCCCTCTGCAGGCTGGGGCATCTGCTTTCAGGCCCTCTCAAAAGGCCATGGTCATCAGGACCTCGATaGTCCGAGGGCACGTGCTCC +
Preference number: 4 (lower is better)
Translates to: RALCRLGHLLSGPLKRPWSSGPR*SEGTCS
Trigger: GGAGCACGTGCCCTCGGACCATCGAGGTCCTGATGA...CCATGGCCTTTTGAGAGGGCCTGAAAGCAGATGCCCCAGCCTGCAGAGGGCGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377867.7
ENST00000420175.3
CDS-3UTR GCA 90 bp ATCACCCGGCTGCCGCTGTCGGTCCGCTTCTCTGCATTGGGAATTGCAGCATCCTGGAGTCCGCGAGGATaGGGGAGACACAGCCCACGT +
Preference number: 4 (lower is better)
Translates to: ITRLPLSVRFSALGIAASWSPRG*GRHSPR
Trigger: ACGTGGGCTGTGTCTCCCGCATCCTCGCGGACTCCA...GGATGCTGCAATTCCCAATGCAGAGAAGCGGACCGACAGCGGCAGCCGGGTGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275838.5
ENST00000420175.3
CDS-3UTR GCA 90 bp GTCCGCTTCTCTGCATTGGGAATTGCAGCATCCACACCTGCCTGCGGAGCTGGGTGGAGTCCGCGAGGATaGGGGAGACACAGCCCACGT +
Preference number: 4 (lower is better)
Translates to: VRFSALGIAASTPACGAGWSPRG*GRHSPR
Trigger: ACGTGGGCTGTGTCTCCCGCATCCTCGCGGACTCCA...CCCAGCTCCGCAGGCAGGTGTGGATGCTGCAATTCCCAATGCAGAGAAGCGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275838.5
ENST00000420175.3
CDS-3UTR GCA 90 bp AGGAGAGCCCCAGTAGGAGTGTGTCTTCATCAGACATCACCCGGCTGCCGCTGTGTGGCCACGGCTGGCTaGCACATGCAGTGGGGTGGT +
Preference number: 4 (lower is better)
Translates to: RRAPVGVCLHQTSPGCRCVATAG*HMQWGG
Trigger: ACCACCCCACTGCATGTGGCAGCCAGCCGTGGCCAC...ACAGCGGCAGCCGGGTGATGTCTGATGAAGACACACTCCTACTGGGGCTCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR GCA 90 bp GTCCGCTTCTCTGCATTGGGAATTGCAGCATCCACACCTGCCTGCGGAGCTGGGACAGGCAGTGTGGCCTaGAGCACAGGCCTCGTGCAG +
Preference number: 4 (lower is better)
Translates to: VRFSALGIAASTPACGAGTGSVA*STGLVQ
Trigger: CTGCACGAGGCCTGTGCTGCAGGCCACACTGCCTGT...CCCAGCTCCGCAGGCAGGTGTGGATGCTGCAATTCCCAATGCAGAGAAGCGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR GCA 90 bp TCATCAGACATCACCCGGCTGCCGCTGTCGGTCCGCTTCTCTGCATTGGGAATTGGCCCCCGGCAGAGATaGAGGGGGCGTTTCCCATCC +
Preference number: 4 (lower is better)
Translates to: SSDITRLPLSVRFSALGIGPRQR*RGRFPS
Trigger: GGATGGGAAACGCCCCCTGCATCTCTGCCGGGGGCC...AATTCCCAATGCAGAGAAGCGGACCGACAGCGGCAGCCGGGTGATGTCTGATGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR GCA 90 bp CTGTCGGTCCGCTTCTCTGCATTGGGAATTGCAGCATCCACACCTGCCTGCGGACCGCACACTCAAGGGTaGCAGGCCCCCGGCAGAGAT +
Preference number: 4 (lower is better)
Translates to: LSVRFSALGIAASTPACGPHTQG*QAPGRD
Trigger: ATCTCTGCCGGGGGCCTGGCACCCTTGAGTGTGCGG...TCCGCAGGCAGGTGTGGATGCTGCAATTCCCAATGCAGAGAAGCGGACCGACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR GCA 90 bp TGTCGGTCCGCTTCTCTGCATTGGGAATTGCAGCATCCACACCTGCCTGCGGAGCCGCACACTCAAGGGTaGCAGGCCCCCGGCAGAGAT +
Preference number: 4 (lower is better)
Translates to: CRSASLHWELQHPHLPAEPHTQG*QAPGRD
Trigger: ATCTCTGCCGGGGGCCTGGCACCCTTGAGTGTGCGG...CTCCGCAGGCAGGTGTGGATGCTGCAATTCCCAATGCAGAGAAGCGGACCGACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR GCA 90 bp AGCCCCAGTAGGAGTGTGTCTTCATCAGACATCACCCGGCTGCCGCTGTCGGTCAGGTGCAGGGGTCGCTaGTTGTCCTGGTCCGCAGCA +
Preference number: 4 (lower is better)
Translates to: SPSRSVSSSDITRLPLSVRCRGR*LSWSAA
Trigger: TGCTGCGGACCAGGACAAGCAGCGACCCCTGCACCT...GACCGACAGCGGCAGCCGGGTGATGTCTGATGAAGACACACTCCTACTGGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR GCA 90 bp GTGTGTCTTCATCAGACATCACCCGGCTGCCGCTGTCGGTCCGCTTCTCTGCATCCCTGCAGAGCACAGTaGAGGGGCGTGTGTCCCCCA +
Preference number: 4 (lower is better)
Translates to: VCLHQTSPGCRCRSASLHPCRAQ*RGVCPP
Trigger: TGGGGGACACACGCCCCTGCACTGTGCTCTGCAGGG...ATGCAGAGAAGCGGACCGACAGCGGCAGCCGGGTGATGTCTGATGAAGACACAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR GCA 90 bp ATCACCCGGCTGCCGCTGTCGGTCCGCTTCTCTGCATTGGGAATTGCAGCATCCTGCAGCGACCTGGGCTaGCTCACCAAGGCGAAGAGG +
Preference number: 4 (lower is better)
Translates to: ITRLPLSVRFSALGIAASCSDLG*LTKAKR
Trigger: CCTCTTCGCCTTGGTGAGGCAGCCCAGGTCGCTGCA...GGATGCTGCAATTCCCAATGCAGAGAAGCGGACCGACAGCGGCAGCCGGGTGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR GCA 90 bp GTGTGTCTTCATCAGACATCACCCGGCTGCCGCTGTCGGTCCGCTTCTCTGCATCAGAGGCGCGCCCTCTaGAGGCTGGGGCATCTGCTT +
Preference number: 4 (lower is better)
Translates to: VCLHQTSPGCRCRSASLHQRRAL*RLGHLL
Trigger: AAGCAGATGCCCCAGCCTGCAGAGGGCGCGCCTCTG...ATGCAGAGAAGCGGACCGACAGCGGCAGCCGGGTGATGTCTGATGAAGACACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR GCA 90 bp CCTGCTGCCAGGGCTACCTGGCCTGAGTTAGTGCAGAGGCGCGCCCTCTGCAGGGTCGGTCCGCTTCTCTaGATTGGGAATTGCAGCATC +
Preference number: 4 (lower is better)
Translates to: PAARATWPELVQRRALCRVGPLL*IGNCSI
Trigger: GATGCTGCAATTCCCAATGCAGAGAAGCGGACCGAC...CCTGCAGAGGGCGCGCCTCTGCACTAACTCAGGCCAGGTAGCCCTGGCAGCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR GCA 90 bp AGGAGAGCCCCAGTAGGAGTGTGTCTTCATCAGACATCACCCGGCTGCCGCTGTTGGTCCGAGGGCACGTaGTCCAGCGCTCCAGCACCT +
Preference number: 4 (lower is better)
Translates to: RRAPVGVCLHQTSPGCRCWSEGT*SSAPAP
Trigger: AGGTGCTGGAGCGCTGGAGCACGTGCCCTCGGACCA...ACAGCGGCAGCCGGGTGATGTCTGATGAAGACACACTCCTACTGGGGCTCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377867.7
ENST00000420175.3
CDS-3UTR CCA 90 bp TGTCTTCATCAGACATCACCCGGCTGCCGCTGTCGGTCCGCTTCTCTGCATTGGGCTCCGAGGCTGACCTaGCCACGCATCCAGCAGGAG +
Preference number: 4 (lower is better)
Translates to: CLHQTSPGCRCRSASLHWAPRLT*PRIQQE
Trigger: CTCCTGCTGGATGCGTGGCCAGGTCAGCCTCGGAGC...CCAATGCAGAGAAGCGGACCGACAGCGGCAGCCGGGTGATGTCTGATGAAGACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275838.5
CDS-3UTR CCA 90 bp AGGAGAGCCCCAGTAGGAGTGTGTCTTCATCAGACATCACCCGGCTGCCGCTGTGCGCCCTCTGCAGGCTaGGGCATCTGCTTTCAGGCC +
Preference number: 4 (lower is better)
Translates to: RRAPVGVCLHQTSPGCRCAPSAG*GICFQA
Trigger: GGCCTGAAAGCAGATGCCCCAGCCTGCAGAGGGCGC...ACAGCGGCAGCCGGGTGATGTCTGATGAAGACACACTCCTACTGGGGCTCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR CCA 90 bp CCCGGGCCAGACTTGAGGTGCTCCTCAGACCCTCTGCTGGGCTTCTCCACCAGCAGATGGTGTCCCCAGTaGGGAGAGGAGTTCTTTCCC +
Preference number: 4 (lower is better)
Translates to: PGPDLRCSSDPLLGFSTSRWCPQ*GEEFFP
Trigger: GGGAAAGAACTCCTCTCCCCACTGGGGACACCATCT...GCTGGTGGAGAAGCCCAGCAGAGGGTCTGAGGAGCACCTCAAGTCTGGCCCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415615.1
CDS-3UTR CCA 90 bp AGCCCCAGTAGGAGTGTGTCTTCATCAGACATCACCCGGCTGCCGCTGTCGGTCCAGAGTCCCCTCTGGTaGCTGCTCCAGCGAGGCTCT +
Preference number: 4 (lower is better)
Translates to: SPSRSVSSSDITRLPLSVQSPLW*LLQRGS
Trigger: AGAGCCTCGCTGGAGCAGCCACCAGAGGGGACTCTG...GACCGACAGCGGCAGCCGGGTGATGTCTGATGAAGACACACTCCTACTGGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377867.7
CDS-3UTR CCA 90 bp CTGTCGGTCCGCTTCTCTGCATTGGGAATTGCAGCATCCACACCTGCCTGCGGAGACCAGAGTCCCCTCTaGTGGCTGCTCCAGCGAGGC +
Preference number: 4 (lower is better)
Translates to: LSVRFSALGIAASTPACGDQSPL*WLLQRG
Trigger: GCCTCGCTGGAGCAGCCACCAGAGGGGACTCTGGTC...TCCGCAGGCAGGTGTGGATGCTGCAATTCCCAATGCAGAGAAGCGGACCGACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377867.7
CDS-3UTR TCA 90 bp TCAGGAGCCAGGCCAGTACTGGAGTCCGCGAGGATGCGGGAGACACAGCCCACGTCAGAGCACGGATGTTaGAGCGGAAATCCCTCCATC +
Preference number: 4 (lower is better)
Translates to: SGARPVLESARMRETQPTSEHGC*SGNPSI
Trigger: GATGGAGGGATTTCCGCTTCAACATCCGTGCTCTGA...CGTGGGCTGTGTCTCCCGCATCCTCGCGGACTCCAGTACTGGCCTGGCTCCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415615.1
CDS-3UTR TCA 90 bp ATCACCCGGCTGCCGCTGTCGGTCCGCTTCTCTGCATTGGGAATTGCAGCATCCCCATGGTGTTGGCGCTaGCACCACAGGACAGGAGCA +
Preference number: 4 (lower is better)
Translates to: ITRLPLSVRFSALGIAASPWCWR*HHRTGA
Trigger: TGCTCCTGTCCTGTGGTGTCAGCGCCAACACCATGG...GGATGCTGCAATTCCCAATGCAGAGAAGCGGACCGACAGCGGCAGCCGGGTGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR TCA 90 bp TCCGCTTCTCTGCATTGGGAATTGCAGCATCCACACCTGCCTGCGGAGCTGGGCCCATGGTGTTGGCGCTaGCACCACAGGACAGGAGCA +
Preference number: 4 (lower is better)
Translates to: SASLHWELQHPHLPAELGPWCWR*HHRTGA
Trigger: TGCTCCTGTCCTGTGGTGTCAGCGCCAACACCATGG...GCCCAGCTCCGCAGGCAGGTGTGGATGCTGCAATTCCCAATGCAGAGAAGCGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR GCA 90 bp TGTCTTCATCAGACATCACCCGGCTGCCGCTGTCGGTCCGCTTCTCTGCATTGGCCAGCCAGCACTGCCTaGCAGAAGGCAAGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: CLHQTSPGCRCRSASLHWPASTA*QKARAG
Trigger: ACCTGCCCTTGCCTTCTGGCAGGCAGTGCTGGCTGG...CCAATGCAGAGAAGCGGACCGACAGCGGCAGCCGGGTGATGTCTGATGAAGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275838.5
ENST00000420175.3
CDS-3UTR GCA 90 bp CTGTCGGTCCGCTTCTCTGCATTGGGAATTGCAGCATCCACACCTGCCTGCGGACCAGCCAGCACTGCCTaGCAGAAGGCAAGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: LSVRFSALGIAASTPACGPASTA*QKARAG
Trigger: ACCTGCCCTTGCCTTCTGGCAGGCAGTGCTGGCTGG...TCCGCAGGCAGGTGTGGATGCTGCAATTCCCAATGCAGAGAAGCGGACCGACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275838.5
ENST00000420175.3
CDS-3UTR GCA 90 bp TGTCTTCATCAGACATCACCCGGCTGCCGCTGTCGGTCCGCTTCTCTGCATTGGACAGGCAGTGTGGCCTaGAGCACAGGCCTCGTGCAG +
Preference number: 4 (lower is better)
Translates to: CLHQTSPGCRCRSASLHWTGSVA*STGLVQ
Trigger: CTGCACGAGGCCTGTGCTGCAGGCCACACTGCCTGT...CCAATGCAGAGAAGCGGACCGACAGCGGCAGCCGGGTGATGTCTGATGAAGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR GCA 90 bp AGCCCCAGTAGGAGTGTGTCTTCATCAGACATCACCCGGCTGCCGCTGTCGGTCCTGAAAGCAGCAAGCTaGACAGCTGCAGGCAGCGGG +
Preference number: 4 (lower is better)
Translates to: SPSRSVSSSDITRLPLSVLKAAS*TAAGSG
Trigger: CCCGCTGCCTGCAGCTGTGCAGCTTGCTGCTTTCAG...GACCGACAGCGGCAGCCGGGTGATGTCTGATGAAGACACACTCCTACTGGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR GCA 90 bp GTGTGTCTTCATCAGACATCACCCGGCTGCCGCTGTCGGTCCGCTTCTCTGCATAGGTGCAGGGGTCGCTaGTTGTCCTGGTCCGCAGCA +
Preference number: 4 (lower is better)
Translates to: VCLHQTSPGCRCRSASLHRCRGR*LSWSAA
Trigger: TGCTGCGGACCAGGACAAGCAGCGACCCCTGCACCT...ATGCAGAGAAGCGGACCGACAGCGGCAGCCGGGTGATGTCTGATGAAGACACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR GCA 90 bp ATCAGACATCACCCGGCTGCCGCTGTCGGTCCGCTTCTCTGCATTGGGAATTGCAGGTGCAGGGGTCGCTaGTTGTCCTGGTCCGCAGCA +
Preference number: 4 (lower is better)
Translates to: IRHHPAAAVGPLLCIGNCRCRGR*LSWSAA
Trigger: TGCTGCGGACCAGGACAAGCAGCGACCCCTGCACCT...GCAATTCCCAATGCAGAGAAGCGGACCGACAGCGGCAGCCGGGTGATGTCTGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR GCA 90 bp TGTCTTCATCAGACATCACCCGGCTGCCGCTGTCGGTCCGCTTCTCTGCATTGGCAGCGGCTCAAATGCTaGAGCGACCTGGGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: CLHQTSPGCRCRSASLHWQRLKC*SDLGCL
Trigger: GAGGCAGCCCAGGTCGCTGCAGCATTTGAGCCGCTG...CCAATGCAGAGAAGCGGACCGACAGCGGCAGCCGGGTGATGTCTGATGAAGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR GCA 90 bp GTGTGTCTTCATCAGACATCACCCGGCTGCCGCTGTCGGTCCGCTTCTCTGCATGCACAGCGGCTCAAATaGTGCAGCGACCTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: VCLHQTSPGCRCRSASLHAQRLK*CSDLGC
Trigger: GCAGCCCAGGTCGCTGCAGCATTTGAGCCGCTGTGC...ATGCAGAGAAGCGGACCGACAGCGGCAGCCGGGTGATGTCTGATGAAGACACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR GCA 90 bp GTGTGTCTTCATCAGACATCACCCGGCTGCCGCTGTCGGTCCGCTTCTCTGCATCAGACATCACCCGGCTaGCGCTGTCGGTCCGCTTCT +
Preference number: 4 (lower is better)
Translates to: VCLHQTSPGCRCRSASLHQTSPG*RCRSAS
Trigger: AGAAGCGGACCGACAGCGGCAGCCGGGTGATGTCTG...ATGCAGAGAAGCGGACCGACAGCGGCAGCCGGGTGATGTCTGATGAAGACACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR CCA 90 bp CCTGCTGCCAGGGCTACCTGGCCTGAGTTAGTGCAGAGGCGCGCCCTCTGCAGGCCCCTTGCACTCTTCTaGAGACCAACTCATGAGCAT +
Preference number: 4 (lower is better)
Translates to: PAARATWPELVQRRALCRPLALF*RPTHEH
Trigger: ATGCTCATGAGTTGGTCTCCAGAAGAGTGCAAGGGG...CCTGCAGAGGGCGCGCCTCTGCACTAACTCAGGCCAGGTAGCCCTGGCAGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275838.5
ENST00000420175.3
CDS-3UTR CCA 90 bp CAGAGTCTCAGAGCACGGATGTTGAAGCGGAAATCCCTCCATCGCTCTGGGTCGGAGCCAGGCCAGTACTaGAGTCCGCGAGGATGCGGG +
Preference number: 4 (lower is better)
Translates to: QSLRARMLKRKSLHRSGSEPGQY*SPRGCG
Trigger: CCCGCATCCTCGCGGACTCCAGTACTGGCCTGGCTC...CGACCCAGAGCGATGGAGGGATTTCCGCTTCAACATCCGTGCTCTGAGACTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415615.1
CDS-3UTR CCA 90 bp GTCCGCTTCTCTGCATTGGGAATTGCAGCATCCACACCTGCCTGCGGAGCTGGGACAGGCAGCCAGCAGTaGGGTCCAGCCTTCGGCATT +
Preference number: 4 (lower is better)
Translates to: VRFSALGIAASTPACGAGTGSQQ*GPAFGI
Trigger: AATGCCGAAGGCTGGACCCCACTGCTGGCTGCCTGT...CCCAGCTCCGCAGGCAGGTGTGGATGCTGCAATTCCCAATGCAGAGAAGCGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR CCA 90 bp TTTTTAATGCACATACAGGGTTTGCACAGGCTAGAAGGGGGCCTCAGGAGAGCCAGGCGGGGCAGCGCTTaGGGCAGGCTGCCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: FLMHIQGLHRLEGGLRRARRGSA*GRLPSR
Trigger: CCTGGAGGGCAGCCTGCCCCAAGCGCTGCCCCGCCT...GGCTCTCCTGAGGCCCCCTTCTAGCCTGTGCAAACCCTGTATGTGCATTAAAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR CCA 90 bp GTCTTCATCAGACATCACCCGGCTGCCGCTGTCGGTCCGCTTCTCTGCATTGGGCAGCGATGTTGCTGGTaGACTGGGCAGGTGGGTGCT +
Preference number: 4 (lower is better)
Translates to: VFIRHHPAAAVGPLLCIGQRCCW*TGQVGA
Trigger: AGCACCCACCTGCCCAGTCCACCAGCAACATCGCTG...CCCAATGCAGAGAAGCGGACCGACAGCGGCAGCCGGGTGATGTCTGATGAAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377867.7
CDS-3UTR CCA 90 bp GTCTTCATCAGACATCACCCGGCTGCCGCTGTCGGTCCGCTTCTCTGCATTGGGTCATCAGGACCTCGATaGTCCGAGGGCACGTGCTCC +
Preference number: 4 (lower is better)
Translates to: VFIRHHPAAAVGPLLCIGSSGPR*SEGTCS
Trigger: GGAGCACGTGCCCTCGGACCATCGAGGTCCTGATGA...CCCAATGCAGAGAAGCGGACCGACAGCGGCAGCCGGGTGATGTCTGATGAAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377867.7
ENST00000420175.3
CDS-3UTR TCA 90 bp TTTTTAATGCACATACAGGGTTTGCACAGGCTAGAAGGGGGCCTCAGGAGAGCCCCCACGCTCCGAGGCTaGCCTGGCCACGCATCCAGC +
Preference number: 4 (lower is better)
Translates to: FLMHIQGLHRLEGGLRRAPTLRG*PGHASS
Trigger: GCTGGATGCGTGGCCAGGTCAGCCTCGGAGCGTGGG...GGCTCTCCTGAGGCCCCCTTCTAGCCTGTGCAAACCCTGTATGTGCATTAAAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000275838.5
CDS-3UTR TCA 90 bp TTTTTAATGCACATACAGGGTTTGCACAGGCTAGAAGGGGGCCTCAGGAGAGCCCTGAGGCTGTGCGGGTaGCGATGGGTCCCGGGCCAG +
Preference number: 4 (lower is better)
Translates to: FLMHIQGLHRLEGGLRRALRLCG*RWVPGQ
Trigger: CTGGCCCGGGACCCATCGTCACCCGCACAGCCTCAG...GGCTCTCCTGAGGCCCCCTTCTAGCCTGTGCAAACCCTGTATGTGCATTAAAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000275838.5
ENST00000420175.3
CDS-3UTR TCA 90 bp CGGTCCGCTTCTCTGCATTGGGAATTGCAGCATCCACACCTGCCTGCGGAGCTGAGCGTCTGCTCCAGCTaGAAGCAGCAAGCTGCACAG +
Preference number: 4 (lower is better)
Translates to: RSASLHWELQHPHLPAELSVCSS*KQQAAQ
Trigger: CTGTGCAGCTTGCTGCTTTCAGCTGGAGCAGACGCT...CAGCTCCGCAGGCAGGTGTGGATGCTGCAATTCCCAATGCAGAGAAGCGGACCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR GCA 90 bp AGGAGAGCCCCAGTAGGAGTGTGTCTTCATCAGACATCACCCGGCTGCCGCTGTAGCCGGGCGGCCACATaGAAAGGGGTCTCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: RRAPVGVCLHQTSPGCRCSRAAT*KGVSSS
Trigger: AGAAGAGGAGACCCCTTTGCATGTGGCCGCCCGGCT...ACAGCGGCAGCCGGGTGATGTCTGATGAAGACACACTCCTACTGGGGCTCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR GCA 90 bp AGGAGAGCCCCAGTAGGAGTGTGTCTTCATCAGACATCACCCGGCTGCCGCTGTCTGAAAGCAGCAAGCTaGACAGCTGCAGGCAGCGGG +
Preference number: 4 (lower is better)
Translates to: RRAPVGVCLHQTSPGCRCLKAAS*TAAGSG
Trigger: CCCGCTGCCTGCAGCTGTGCAGCTTGCTGCTTTCAG...ACAGCGGCAGCCGGGTGATGTCTGATGAAGACACACTCCTACTGGGGCTCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR GCA 90 bp TTTTTAATGCACATACAGGGTTTGCACAGGCTAGAAGGGGGCCTCAGGAGAGCCCGGCGGCAGGCCAGGTaGAGGGGTCGCTGCTTGTCC +
Preference number: 4 (lower is better)
Translates to: FLMHIQGLHRLEGGLRRARRQAR*RGRCLS
Trigger: GGACAAGCAGCGACCCCTGCACCTGGCCTGCCGCCG...GGCTCTCCTGAGGCCCCCTTCTAGCCTGTGCAAACCCTGTATGTGCATTAAAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR CCA 90 bp TCAGGAGCCAGGCCAGTACTGGAGTCCGCGAGGATGCGGGAGACACAGCCCACGATCGCTCTGGGTCGCTaGTATCAAAGACGGAATCAG +
Preference number: 4 (lower is better)
Translates to: SGARPVLESARMRETQPTIALGR*YQRRNQ
Trigger: CTGATTCCGTCTTTGATACCAGCGACCCAGAGCGAT...CGTGGGCTGTGTCTCCCGCATCCTCGCGGACTCCAGTACTGGCCTGGCTCCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415615.1
CDS-3UTR CCA 90 bp AGGAGAGCCCCAGTAGGAGTGTGTCTTCATCAGACATCACCCGGCTGCCGCTGTGGCTGCCACATGCAGTaGGGTGGTCAGCTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: RRAPVGVCLHQTSPGCRCGCHMQ*GGQLLF
Trigger: GAAGAGGAGCTGACCACCCCACTGCATGTGGCAGCC...ACAGCGGCAGCCGGGTGATGTCTGATGAAGACACACTCCTACTGGGGCTCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR CCA 90 bp TCATCAGACATCACCCGGCTGCCGCTGTCGGTCCGCTTCTCTGCATTGGGAATTCCTGGTCAGCGATGTTaGGGTCGGCTCCTGCCACCA +
Preference number: 4 (lower is better)
Translates to: SSDITRLPLSVRFSALGIPGQRC*GRLLPP
Trigger: TGGTGGCAGGAGCCGACCCCAACATCGCTGACCAGG...AATTCCCAATGCAGAGAAGCGGACCGACAGCGGCAGCCGGGTGATGTCTGATGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR CCA 90 bp TGTCGGTCCGCTTCTCTGCATTGGGAATTGCAGCATCCACACCTGCCTGCGGAGGCATCGGTGATGGACTaGCAGCGGACGTCACAGGCA +
Preference number: 4 (lower is better)
Translates to: CRSASLHWELQHPHLPAEASVMD*QRTSQA
Trigger: TGCCTGTGACGTCCGCTGCCAGTCCATCACCGATGC...CTCCGCAGGCAGGTGTGGATGCTGCAATTCCCAATGCAGAGAAGCGGACCGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR CCA 90 bp TCATCAGACATCACCCGGCTGCCGCTGTCGGTCCGCTTCTCTGCATTGGGAATTACACGGACGGCGCCATaGTTGAGCAGAGCCCGAACC +
Preference number: 4 (lower is better)
Translates to: SSDITRLPLSVRFSALGITRTAP*LSRART
Trigger: GGTTCGGGCTCTGCTCAACCATGGCGCCGTCCGTGT...AATTCCCAATGCAGAGAAGCGGACCGACAGCGGCAGCCGGGTGATGTCTGATGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR CCA 90 bp TGGAGATTTTTAATGCACATACAGGGTTTGCACAGGCTAGAAGGGGGCCTCAGGCTTGGGGAGGGCCCCTaGCCAGACACGGACGGCGCC +
Preference number: 4 (lower is better)
Translates to: WRFLMHIQGLHRLEGGLRLGEGP*PDTDGA
Trigger: GGCGCCGTCCGTGTCTGGCCAGGGGCCCTCCCCAAG...CCTGAGGCCCCCTTCTAGCCTGTGCAAACCCTGTATGTGCATTAAAAATCTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR CCA 90 bp TGTCTTCATCAGACATCACCCGGCTGCCGCTGTCGGTCCGCTTCTCTGCATTGGAATGCTGCAGCGACCTaGGCTGCCTCACCAAGGCGA +
Preference number: 4 (lower is better)
Translates to: CLHQTSPGCRCRSASLHWNAAAT*AASPRR
Trigger: TCGCCTTGGTGAGGCAGCCCAGGTCGCTGCAGCATT...CCAATGCAGAGAAGCGGACCGACAGCGGCAGCCGGGTGATGTCTGATGAAGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR CCA 90 bp TTTTTAATGCACATACAGGGTTTGCACAGGCTAGAAGGGGGCCTCAGGAGAGCCAGGCTGCCCTCCAGGTaGGAGCGGAGCGCACAGCGG +
Preference number: 4 (lower is better)
Translates to: FLMHIQGLHRLEGGLRRARLPSR*ERSAQR
Trigger: CCGCTGTGCGCTCCGCTCCCACCTGGAGGGCAGCCT...GGCTCTCCTGAGGCCCCCTTCTAGCCTGTGCAAACCCTGTATGTGCATTAAAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR CCA 90 bp AAAGACGGAATCAGGAGCCAGGCCAGTACTGGAGTCCGCGAGGATGCGGGAGACGGGCATGGCTTGTTCTaGGAGAGCCAAAGCAGCACG +
Preference number: 4 (lower is better)
Translates to: KDGIRSQASTGVREDAGDGHGLF*ESQSST
Trigger: CGTGCTGCTTTGGCTCTCCCAGAACAAGCCATGCCC...GTCTCCCGCATCCTCGCGGACTCCAGTACTGGCCTGGCTCCTGATTCCGTCTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415615.1
CDS-3UTR CCA 90 bp GTCCGCTTCTCTGCATTGGGAATTGCAGCATCCACACCTGCCTGCGGAGCTGGGTGCAGGGCCATGTCTTaGCAGAGCAGTGGTGATGGC +
Preference number: 4 (lower is better)
Translates to: VRFSALGIAASTPACGAGCRAMS*QSSGDG
Trigger: GCCATCACCACTGCTCTGCCAAGACATGGCCCTGCA...CCCAGCTCCGCAGGCAGGTGTGGATGCTGCAATTCCCAATGCAGAGAAGCGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377867.7
CDS-3UTR TCA 90 bp AGGAGAGCCCCAGTAGGAGTGTGTCTTCATCAGACATCACCCGGCTGCCGCTGTAGCGTCTGCTCCAGCTaGAAGCAGCAAGCTGCACAG +
Preference number: 4 (lower is better)
Translates to: RRAPVGVCLHQTSPGCRCSVCSS*KQQAAQ
Trigger: CTGTGCAGCTTGCTGCTTTCAGCTGGAGCAGACGCT...ACAGCGGCAGCCGGGTGATGTCTGATGAAGACACACTCCTACTGGGGCTCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR GCA 90 bp AGGAGAGCCCCAGTAGGAGTGTGTCTTCATCAGACATCACCCGGCTGCCGCTGTGCTCTCCCTGCCCCTTaGACTCTTCTGGAGACCAAC +
Preference number: 4 (lower is better)
Translates to: RRAPVGVCLHQTSPGCRCALPAP*TLLETN
Trigger: GTTGGTCTCCAGAAGAGTGCAAGGGGCAGGGAGAGC...ACAGCGGCAGCCGGGTGATGTCTGATGAAGACACACTCCTACTGGGGCTCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275838.5
ENST00000420175.3
CDS-3UTR GCA 90 bp TTTTTAATGCACATACAGGGTTTGCACAGGCTAGAAGGGGGCCTCAGGAGAGCCAGAGCCCGAACCACGTaGTCGGGGCTCTGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: FLMHIQGLHRLEGGLRRARARTT*SGLWAR
Trigger: CCTGGCCCAGAGCCCCGAGCACGTGGTTCGGGCTCT...GGCTCTCCTGAGGCCCCCTTCTAGCCTGTGCAAACCCTGTATGTGCATTAAAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR GCA 90 bp TTTTTAATGCACATACAGGGTTTGCACAGGCTAGAAGGGGGCCTCAGGAGAGCCGTCCCCTCTGGTGGCTaGTCCAGCGAGGCTCTGCGG +
Preference number: 4 (lower is better)
Translates to: FLMHIQGLHRLEGGLRRAVPSGG*SSEALR
Trigger: CCGCAGAGCCTCGCTGGAGCAGCCACCAGAGGGGAC...GGCTCTCCTGAGGCCCCCTTCTAGCCTGTGCAAACCCTGTATGTGCATTAAAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000377867.7
CDS-3UTR CCA 90 bp CGCGCCCTCTGCAGGCTGGGGCATCTGCTTTCAGGCCCTCTCAAAAGGCCATGGCAGCAGGAGCTATTCTaGGCTCCACATGACTGTGTT +
Preference number: 4 (lower is better)
Translates to: RALCRLGHLLSGPLKRPWQQELF*APHDCV
Trigger: AACACAGTCATGTGGAGCCCAGAATAGCTCCTGCTG...CCATGGCCTTTTGAGAGGGCCTGAAAGCAGATGCCCCAGCCTGCAGAGGGCGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275838.5
CDS-3UTR CCA 90 bp TCATCAGACATCACCCGGCTGCCGCTGTCGGTCCGCTTCTCTGCATTGGGAATTACAGGCAGCCAGCAGTaGGGTCCAGCCTTCGGCATT +
Preference number: 4 (lower is better)
Translates to: SSDITRLPLSVRFSALGITGSQQ*GPAFGI
Trigger: AATGCCGAAGGCTGGACCCCACTGCTGGCTGCCTGT...AATTCCCAATGCAGAGAAGCGGACCGACAGCGGCAGCCGGGTGATGTCTGATGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR CCA 90 bp TGGAGATTTTTAATGCACATACAGGGTTTGCACAGGCTAGAAGGGGGCCTCAGGACGTGCTCGGGGCTCTaGGCCAGGGCTGCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: WRFLMHIQGLHRLEGGLRTCSGL*ARAAAG
Trigger: CCCAGCTGCAGCCCTGGCCCAGAGCCCCGAGCACGT...CCTGAGGCCCCCTTCTAGCCTGTGCAAACCCTGTATGTGCATTAAAAATCTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR CCA 90 bp ATCACCCGGCTGCCGCTGTCGGTCCGCTTCTCTGCATTGGGAATTGCAGCATCCTCTTTCCCCAGGGCATaGCTTGTTCTGGGAGAGCCA +
Preference number: 4 (lower is better)
Translates to: ITRLPLSVRFSALGIAASSFPRA*LVLGEP
Trigger: TGGCTCTCCCAGAACAAGCCATGCCCTGGGGAAAGA...GGATGCTGCAATTCCCAATGCAGAGAAGCGGACCGACAGCGGCAGCCGGGTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377867.7
CDS-3UTR TCA 90 bp CTGTCGGTCCGCTTCTCTGCATTGGGAATTGCAGCATCCACACCTGCCTGCGGACTATTGGGCAAGCTTTaGGGTCGGGGAGAAACAGCC +
Preference number: 4 (lower is better)
Translates to: LSVRFSALGIAASTPACGLLGKL*GRGETA
Trigger: GGCTGTTTCTCCCCGACCTCAAAGCTTGCCCAATAG...TCCGCAGGCAGGTGTGGATGCTGCAATTCCCAATGCAGAGAAGCGGACCGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275838.5
CDS-3UTR TCA 90 bp TTTTTAATGCACATACAGGGTTTGCACAGGCTAGAAGGGGGCCTCAGGAGAGCCCAGGGCTACCTGGCCTaGGTTAGTGCAGAGGCGCGC +
Preference number: 4 (lower is better)
Translates to: FLMHIQGLHRLEGGLRRAQGYLA*VSAEAR
Trigger: GCGCGCCTCTGCACTAACTCAGGCCAGGTAGCCCTG...GGCTCTCCTGAGGCCCCCTTCTAGCCTGTGCAAACCCTGTATGTGCATTAAAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR GCA 90 bp TGGAGATTTTTAATGCACATACAGGGTTTGCACAGGCTAGAAGGGGGCCTCAGGGGCCCCCGGCAGAGATaGAGGGGGCGTTTCCCATCC +
Preference number: 4 (lower is better)
Translates to: WRFLMHIQGLHRLEGGLRGPRQR*RGRFPS
Trigger: GGATGGGAAACGCCCCCTGCATCTCTGCCGGGGGCC...CCTGAGGCCCCCTTCTAGCCTGTGCAAACCCTGTATGTGCATTAAAAATCTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 24 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR GCA 90 bp ACAGACCTGGAGATTTTTAATGCACATACAGGGTTTGCACAGGCTAGAAGGGGGCGGCGGCAGGCCAGGTaGAGGGGTCGCTGCTTGTCC +
Preference number: 4 (lower is better)
Translates to: TDLEIFNAHTGFAQARRGRRQAR*RGRCLS
Trigger: GGACAAGCAGCGACCCCTGCACCTGGCCTGCCGCCG...CCCCCTTCTAGCCTGTGCAAACCCTGTATGTGCATTAAAAATCTCCAGGTCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR GCA 90 bp TGGAGATTTTTAATGCACATACAGGGTTTGCACAGGCTAGAAGGGGGCCTCAGGCAGCTCCACGACAGCTaGATGGCCACGGCGGCAGGC +
Preference number: 4 (lower is better)
Translates to: WRFLMHIQGLHRLEGGLRQLHDS*MATAAG
Trigger: GCCTGCCGCCGTGGCCATGCAGCTGTCGTGGAGCTG...CCTGAGGCCCCCTTCTAGCCTGTGCAAACCCTGTATGTGCATTAAAAATCTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR CCA 90 bp AGCCCCAGTAGGAGTGTGTCTTCATCAGACATCACCCGGCTGCCGCTGTCGGTCCAAGGTGTAGGCTATTaGGCAAGCTTTGAGGTCGGG +
Preference number: 4 (lower is better)
Translates to: SPSRSVSSSDITRLPLSVQGVGY*ASFEVG
Trigger: CCCGACCTCAAAGCTTGCCCAATAGCCTACACCTTG...GACCGACAGCGGCAGCCGGGTGATGTCTGATGAAGACACACTCCTACTGGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275838.5
CDS-3UTR CCA 90 bp AATCAGGAGCCAGGCCAGTACTGGAGTCCGCGAGGATGCGGGAGACACAGCCCACAGCAGGAGCTATTCTaGGCTCCACATGACTGTGTT +
Preference number: 4 (lower is better)
Translates to: NQEPGQYWSPRGCGRHSPQQELF*APHDCV
Trigger: AACACAGTCATGTGGAGCCCAGAATAGCTCCTGCTG...TGGGCTGTGTCTCCCGCATCCTCGCGGACTCCAGTACTGGCCTGGCTCCTGATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415615.1
CDS-3UTR CCA 90 bp GTGTGTCTTCATCAGACATCACCCGGCTGCCGCTGTCGGTCCGCTTCTCTGCATCCACATGCAGTGGGGTaGTCAGCTCCTCTTCGTATG +
Preference number: 4 (lower is better)
Translates to: VCLHQTSPGCRCRSASLHPHAVG*SAPLRM
Trigger: CATACGAAGAGGAGCTGACCACCCCACTGCATGTGG...ATGCAGAGAAGCGGACCGACAGCGGCAGCCGGGTGATGTCTGATGAAGACACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR CCA 90 bp TGTCTTCATCAGACATCACCCGGCTGCCGCTGTCGGTCCGCTTCTCTGCATTGGCCACATGCAGTGGGGTaGTCAGCTCCTCTTCGTATG +
Preference number: 4 (lower is better)
Translates to: CLHQTSPGCRCRSASLHWPHAVG*SAPLRM
Trigger: CATACGAAGAGGAGCTGACCACCCCACTGCATGTGG...CCAATGCAGAGAAGCGGACCGACAGCGGCAGCCGGGTGATGTCTGATGAAGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR CCA 90 bp TTTTTAATGCACATACAGGGTTTGCACAGGCTAGAAGGGGGCCTCAGGAGAGCCCGCAGGACTTCCGTGTaGCCACGGCTGGCTGCCACA +
Preference number: 4 (lower is better)
Translates to: FLMHIQGLHRLEGGLRRARRTSV*PRLAAT
Trigger: TGTGGCAGCCAGCCGTGGCCACACGGAAGTCCTGCG...GGCTCTCCTGAGGCCCCCTTCTAGCCTGTGCAAACCCTGTATGTGCATTAAAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR CCA 90 bp AGGAGAGCCCCAGTAGGAGTGTGTCTTCATCAGACATCACCCGGCTGCCGCTGTAGATGGTGTCCCCAGTaGGGAGAGGAGTTCTTTCCC +
Preference number: 4 (lower is better)
Translates to: RRAPVGVCLHQTSPGCRCRWCPQ*GEEFFP
Trigger: GGGAAAGAACTCCTCTCCCCACTGGGGACACCATCT...ACAGCGGCAGCCGGGTGATGTCTGATGAAGACACACTCCTACTGGGGCTCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377867.7
CDS-3UTR CCA 90 bp CAGACCTGGAGATTTTTAATGCACATACAGGGTTTGCACAGGCTAGAAGGGGGCAGCGCTCCAGCACCTTaGGGAGGGCCCCTGGCCAGA +
Preference number: 4 (lower is better)
Translates to: QTWRFLMHIQGLHRLEGGSAPAP*GGPLAR
Trigger: TCTGGCCAGGGGCCCTCCCCAAGGTGCTGGAGCGCT...GCCCCCTTCTAGCCTGTGCAAACCCTGTATGTGCATTAAAAATCTCCAGGTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000377867.7
ENST00000420175.3
CDS-3UTR CCA 90 bp TTCTTGGGCCAAGGTGTAGGCTATTGGGCAAGCTTTGAGGTCGGGGAGAAACAGCCCTTAGGACCTCTGTaGCCGAGGCAGTCAGCCCAG +
Preference number: 4 (lower is better)
Translates to: FLGQGVGYWASFEVGEKQPLGPL*PRQSAQ
Trigger: CTGGGCTGACTGCCTCGGCCACAGAGGTCCTAAGGG...CTGTTTCTCCCCGACCTCAAAGCTTGCCCAATAGCCTACACCTTGGCCCAAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415615.1
CDS-3UTR CCA 90 bp TTCTTGGGCCAAGGTGTAGGCTATTGGGCAAGCTTTGAGGTCGGGGAGAAACAGGCTTCTCCACCAGCCTaGCCACGCATCCAGCAGGAG +
Preference number: 4 (lower is better)
Translates to: FLGQGVGYWASFEVGEKQASPPA*PRIQQE
Trigger: CTCCTGCTGGATGCGTGGCCAGGCTGGTGGAGAAGC...CTGTTTCTCCCCGACCTCAAAGCTTGCCCAATAGCCTACACCTTGGCCCAAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415615.1
CDS-3UTR TCA 90 bp ATCAGACATCACCCGGCTGCCGCTGTCGGTCCGCTTCTCTGCATTGGGAATTGCATTCTGGGCTCCACATaGCTGTGTTCTTGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: IRHHPAAAVGPLLCIGNCILGST*LCSWAK
Trigger: CTTGGCCCAAGAACACAGTCATGTGGAGCCCAGAAT...GCAATTCCCAATGCAGAGAAGCGGACCGACAGCGGCAGCCGGGTGATGTCTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275838.5
CDS-3UTR TCA 90 bp TGGAGATTTTTAATGCACATACAGGGTTTGCACAGGCTAGAAGGGGGCCTCAGGTGGCCTCGGCATCGGTaGTGGACTGGCAGCGGACGT +
Preference number: 4 (lower is better)
Translates to: WRFLMHIQGLHRLEGGLRWPRHR*WTGSGR
Trigger: ACGTCCGCTGCCAGTCCATCACCGATGCCGAGGCCA...CCTGAGGCCCCCTTCTAGCCTGTGCAAACCCTGTATGTGCATTAAAAATCTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR TCA 90 bp TGGAGATTTTTAATGCACATACAGGGTTTGCACAGGCTAGAAGGGGGCCTCAGGGGACGGCGCCATGGTTaGGCAGAGCCCGAACCACGT +
Preference number: 4 (lower is better)
Translates to: WRFLMHIQGLHRLEGGLRGRRHG*AEPEPR
Trigger: ACGTGGTTCGGGCTCTGCTCAACCATGGCGCCGTCC...CCTGAGGCCCCCTTCTAGCCTGTGCAAACCCTGTATGTGCATTAAAAATCTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR GCA 90 bp AGGAGCTATTCTGGGCTCCACATGACTGTGTTCTTGGGCCAAGGTGTAGGCTATCCAGCCAGCACTGCCTaGCAGAAGGCAAGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: RSYSGLHMTVFLGQGVGYPASTA*QKARAG
Trigger: ACCTGCCCTTGCCTTCTGGCAGGCAGTGCTGGCTGG...ATAGCCTACACCTTGGCCCAAGAACACAGTCATGTGGAGCCCAGAATAGCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415615.1
CDS-3UTR GCA 90 bp TGGAGATTTTTAATGCACATACAGGGTTTGCACAGGCTAGAAGGGGGCCTCAGGCGGCTGGCTGCCACATaGAGTGGGGTGGTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: WRFLMHIQGLHRLEGGLRRLAAT*SGVVSS
Trigger: GGAGCTGACCACCCCACTGCATGTGGCAGCCAGCCG...CCTGAGGCCCCCTTCTAGCCTGTGCAAACCCTGTATGTGCATTAAAAATCTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR GCA 90 bp CAGACCTGGAGATTTTTAATGCACATACAGGGTTTGCACAGGCTAGAAGGGGGCCAGAGGCGCGCCCTCTaGAGGCTGGGGCATCTGCTT +
Preference number: 4 (lower is better)
Translates to: QTWRFLMHIQGLHRLEGGQRRAL*RLGHLL
Trigger: AAGCAGATGCCCCAGCCTGCAGAGGGCGCGCCTCTG...GCCCCCTTCTAGCCTGTGCAAACCCTGTATGTGCATTAAAAATCTCCAGGTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR GCA 90 bp TGTCGGTCCGCTTCTCTGCATTGGGAATTGCAGCATCCACACCTGCCTGCGGAGGTCGGTCCGCTTCTCTaGATTGGGAATTGCAGCATC +
Preference number: 4 (lower is better)
Translates to: CRSASLHWELQHPHLPAEVGPLL*IGNCSI
Trigger: GATGCTGCAATTCCCAATGCAGAGAAGCGGACCGAC...CTCCGCAGGCAGGTGTGGATGCTGCAATTCCCAATGCAGAGAAGCGGACCGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR CCA 90 bp CTGTCGGTCCGCTTCTCTGCATTGGGAATTGCAGCATCCACACCTGCCTGCGGAATCCCTCCATCGCTCTaGGTCGCTGGTATCAAAGAC +
Preference number: 4 (lower is better)
Translates to: LSVRFSALGIAASTPACGIPPSL*VAGIKD
Trigger: GTCTTTGATACCAGCGACCCAGAGCGATGGAGGGAT...TCCGCAGGCAGGTGTGGATGCTGCAATTCCCAATGCAGAGAAGCGGACCGACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275838.5
ENST00000420175.3
CDS-3UTR CCA 90 bp GTGTGTCTTCATCAGACATCACCCGGCTGCCGCTGTCGGTCCGCTTCTCTGCATATCCCTCCATCGCTCTaGGTCGCTGGTATCAAAGAC +
Preference number: 4 (lower is better)
Translates to: VCLHQTSPGCRCRSASLHIPPSL*VAGIKD
Trigger: GTCTTTGATACCAGCGACCCAGAGCGATGGAGGGAT...ATGCAGAGAAGCGGACCGACAGCGGCAGCCGGGTGATGTCTGATGAAGACACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275838.5
ENST00000420175.3
CDS-3UTR CCA 90 bp ACAGACCTGGAGATTTTTAATGCACATACAGGGTTTGCACAGGCTAGAAGGGGGCCGTGTGGCCACGGCTaGCTGCCACATGCAGTGGGG +
Preference number: 4 (lower is better)
Translates to: TDLEIFNAHTGFAQARRGPCGHG*LPHAVG
Trigger: CCCCACTGCATGTGGCAGCCAGCCGTGGCCACACGG...CCCCCTTCTAGCCTGTGCAAACCCTGTATGTGCATTAAAAATCTCCAGGTCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR CCA 90 bp TGGAGATTTTTAATGCACATACAGGGTTTGCACAGGCTAGAAGGGGGCCTCAGGTCTGCCAGCTCCACATaGCCAAGCCGGGCGGCCACA +
Preference number: 4 (lower is better)
Translates to: WRFLMHIQGLHRLEGGLRSASST*PSRAAT
Trigger: TGTGGCCGCCCGGCTTGGCCATGTGGAGCTGGCAGA...CCTGAGGCCCCCTTCTAGCCTGTGCAAACCCTGTATGTGCATTAAAAATCTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR CCA 90 bp GAGATTTTTAATGCACATACAGGGTTTGCACAGGCTAGAAGGGGGCCTCAGGAGTCTGCCAGCTCCACATaGCCAAGCCGGGCGGCCACA +
Preference number: 4 (lower is better)
Translates to: EIFNAHTGFAQARRGPQESASST*PSRAAT
Trigger: TGTGGCCGCCCGGCTTGGCCATGTGGAGCTGGCAGA...CTCCTGAGGCCCCCTTCTAGCCTGTGCAAACCCTGTATGTGCATTAAAAATCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR CCA 90 bp CGGTCCGCTTCTCTGCATTGGGAATTGCAGCATCCACACCTGCCTGCGGAGCTGCCTCTCAAAAGGCCATaGACATCTAGTAGAGCACGC +
Preference number: 4 (lower is better)
Translates to: RSASLHWELQHPHLPAELPLKRP*TSSRAR
Trigger: GCGTGCTCTACTAGATGTCCATGGCCTTTTGAGAGG...CAGCTCCGCAGGCAGGTGTGGATGCTGCAATTCCCAATGCAGAGAAGCGGACCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR CCA 90 bp ACAGACCTGGAGATTTTTAATGCACATACAGGGTTTGCACAGGCTAGAAGGGGGAGCGCTCCAGCACCTTaGGGAGGGCCCCTGGCCAGA +
Preference number: 4 (lower is better)
Translates to: TDLEIFNAHTGFAQARRGSAPAP*GGPLAR
Trigger: TCTGGCCAGGGGCCCTCCCCAAGGTGCTGGAGCGCT...CCCCCTTCTAGCCTGTGCAAACCCTGTATGTGCATTAAAAATCTCCAGGTCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000377867.7
ENST00000420175.3
CDS-3UTR GCA 90 bp ACAGACCTGGAGATTTTTAATGCACATACAGGGTTTGCACAGGCTAGAAGGGGGGTGGCCACGGCTGGCTaGCACATGCAGTGGGGTGGT +
Preference number: 4 (lower is better)
Translates to: TDLEIFNAHTGFAQARRGVATAG*HMQWGG
Trigger: ACCACCCCACTGCATGTGGCAGCCAGCCGTGGCCAC...CCCCCTTCTAGCCTGTGCAAACCCTGTATGTGCATTAAAAATCTCCAGGTCTGT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR GCA 90 bp TTTTTAATGCACATACAGGGTTTGCACAGGCTAGAAGGGGGCCTCAGGAGAGCCAGCCGGGCGGCCACATaGAAAGGGGTCTCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: FLMHIQGLHRLEGGLRRASRAAT*KGVSSS
Trigger: AGAAGAGGAGACCCCTTTGCATGTGGCCGCCCGGCT...GGCTCTCCTGAGGCCCCCTTCTAGCCTGTGCAAACCCTGTATGTGCATTAAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR GCA 90 bp TTTTTAATGCACATACAGGGTTTGCACAGGCTAGAAGGGGGCCTCAGGAGAGCCCTGAAAGCAGCAAGCTaGACAGCTGCAGGCAGCGGG +
Preference number: 4 (lower is better)
Translates to: FLMHIQGLHRLEGGLRRALKAAS*TAAGSG
Trigger: CCCGCTGCCTGCAGCTGTGCAGCTTGCTGCTTTCAG...GGCTCTCCTGAGGCCCCCTTCTAGCCTGTGCAAACCCTGTATGTGCATTAAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR GCA 90 bp TGGAGATTTTTAATGCACATACAGGGTTTGCACAGGCTAGAAGGGGGCCTCAGGCAGCGGCTCAAATGCTaGAGCGACCTGGGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: WRFLMHIQGLHRLEGGLRQRLKC*SDLGCL
Trigger: GAGGCAGCCCAGGTCGCTGCAGCATTTGAGCCGCTG...CCTGAGGCCCCCTTCTAGCCTGTGCAAACCCTGTATGTGCATTAAAAATCTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR GCA 90 bp TGGAGATTTTTAATGCACATACAGGGTTTGCACAGGCTAGAAGGGGGCCTCAGGCAGACATCACCCGGCTaGCGCTGTCGGTCCGCTTCT +
Preference number: 4 (lower is better)
Translates to: WRFLMHIQGLHRLEGGLRQTSPG*RCRSAS
Trigger: AGAAGCGGACCGACAGCGGCAGCCGGGTGATGTCTG...CCTGAGGCCCCCTTCTAGCCTGTGCAAACCCTGTATGTGCATTAAAAATCTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR GCA 90 bp ACAGACCTGGAGATTTTTAATGCACATACAGGGTTTGCACAGGCTAGAAGGGGGTGGTCCGAGGGCACGTaGTCCAGCGCTCCAGCACCT +
Preference number: 4 (lower is better)
Translates to: TDLEIFNAHTGFAQARRGWSEGT*SSAPAP
Trigger: AGGTGCTGGAGCGCTGGAGCACGTGCCCTCGGACCA...CCCCCTTCTAGCCTGTGCAAACCCTGTATGTGCATTAAAAATCTCCAGGTCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000377867.7
ENST00000420175.3
CDS-3UTR CCA 90 bp CTGTCGGTCCGCTTCTCTGCATTGGGAATTGCAGCATCCACACCTGCCTGCGGAATCGCTCTGGGTCGCTaGTATCAAAGACGGAATCAG +
Preference number: 4 (lower is better)
Translates to: LSVRFSALGIAASTPACGIALGR*YQRRNQ
Trigger: CTGATTCCGTCTTTGATACCAGCGACCCAGAGCGAT...TCCGCAGGCAGGTGTGGATGCTGCAATTCCCAATGCAGAGAAGCGGACCGACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275838.5
ENST00000420175.3
CDS-3UTR CCA 90 bp CAGAGTCTCAGAGCACGGATGTTGAAGCGGAAATCCCTCCATCGCTCTGGGTCGATCCCTCCATCGCTCTaGGTCGCTGGTATCAAAGAC +
Preference number: 4 (lower is better)
Translates to: QSLRARMLKRKSLHRSGSIPPSL*VAGIKD
Trigger: GTCTTTGATACCAGCGACCCAGAGCGATGGAGGGAT...CGACCCAGAGCGATGGAGGGATTTCCGCTTCAACATCCGTGCTCTGAGACTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415615.1
CDS-3UTR CCA 90 bp CTGTCGGTCCGCTTCTCTGCATTGGGAATTGCAGCATCCACACCTGCCTGCGGACCTCTCAAAAGGCCATaGACATCTAGTAGAGCACGC +
Preference number: 4 (lower is better)
Translates to: LSVRFSALGIAASTPACGPLKRP*TSSRAR
Trigger: GCGTGCTCTACTAGATGTCCATGGCCTTTTGAGAGG...TCCGCAGGCAGGTGTGGATGCTGCAATTCCCAATGCAGAGAAGCGGACCGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR CCA 90 bp ACAGACCTGGAGATTTTTAATGCACATACAGGGTTTGCACAGGCTAGAAGGGGGGCGCCCTCTGCAGGCTaGGGCATCTGCTTTCAGGCC +
Preference number: 4 (lower is better)
Translates to: TDLEIFNAHTGFAQARRGAPSAG*GICFQA
Trigger: GGCCTGAAAGCAGATGCCCCAGCCTGCAGAGGGCGC...CCCCCTTCTAGCCTGTGCAAACCCTGTATGTGCATTAAAAATCTCCAGGTCTGT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR CCA 90 bp CAGACCTGGAGATTTTTAATGCACATACAGGGTTTGCACAGGCTAGAAGGGGGCATGTTGCTGGTGGACTaGGCAGGTGGGTGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: QTWRFLMHIQGLHRLEGGMLLVD*AGGCWA
Trigger: GGCCCAGCACCCACCTGCCCAGTCCACCAGCAACAT...GCCCCCTTCTAGCCTGTGCAAACCCTGTATGTGCATTAAAAATCTCCAGGTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000377867.7
CDS-3UTR GCA 90 bp ACAGACCTGGAGATTTTTAATGCACATACAGGGTTTGCACAGGCTAGAAGGGGGTGCAGCGACCTGGGCTaGCTCACCAAGGCGAAGAGG +
Preference number: 4 (lower is better)
Translates to: TDLEIFNAHTGFAQARRGCSDLG*LTKAKR
Trigger: CCTCTTCGCCTTGGTGAGGCAGCCCAGGTCGCTGCA...CCCCCTTCTAGCCTGTGCAAACCCTGTATGTGCATTAAAAATCTCCAGGTCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR GCA 90 bp ACAGACCTGGAGATTTTTAATGCACATACAGGGTTTGCACAGGCTAGAAGGGGGGCACAGCGGCTCAAATaGTGCAGCGACCTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: TDLEIFNAHTGFAQARRGAQRLK*CSDLGC
Trigger: GCAGCCCAGGTCGCTGCAGCATTTGAGCCGCTGTGC...CCCCCTTCTAGCCTGTGCAAACCCTGTATGTGCATTAAAAATCTCCAGGTCTGT
54% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR GCA 90 bp ACAGACCTGGAGATTTTTAATGCACATACAGGGTTTGCACAGGCTAGAAGGGGGCAGACATCACCCGGCTaGCGCTGTCGGTCCGCTTCT +
Preference number: 4 (lower is better)
Translates to: TDLEIFNAHTGFAQARRGQTSPG*RCRSAS
Trigger: AGAAGCGGACCGACAGCGGCAGCCGGGTGATGTCTG...CCCCCTTCTAGCCTGTGCAAACCCTGTATGTGCATTAAAAATCTCCAGGTCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR GCA 90 bp TGGAGATTTTTAATGCACATACAGGGTTTGCACAGGCTAGAAGGGGGCCTCAGGCAGCTCCTGCAACCTTaGCAGGTCCCCGGTGTAGAG +
Preference number: 4 (lower is better)
Translates to: WRFLMHIQGLHRLEGGLRQLLQP*QVPGVE
Trigger: CTCTACACCGGGGACCTGGCAAGGTTGCAGGAGCTG...CCTGAGGCCCCCTTCTAGCCTGTGCAAACCCTGTATGTGCATTAAAAATCTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000377867.7
CDS-3UTR CCA 90 bp GAGATTTTTAATGCACATACAGGGTTTGCACAGGCTAGAAGGGGGCCTCAGGAGGGGCGTTTCCCATCCTaGTCAGCGATGTTGGGGTCG +
Preference number: 4 (lower is better)
Translates to: EIFNAHTGFAQARRGPQEGRFPS*SAMLGS
Trigger: CGACCCCAACATCGCTGACCAGGATGGGAAACGCCC...CTCCTGAGGCCCCCTTCTAGCCTGTGCAAACCCTGTATGTGCATTAAAAATCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR CCA 90 bp TGGAGATTTTTAATGCACATACAGGGTTTGCACAGGCTAGAAGGGGGCCTCAGGACAGGCAGCCAGCAGTaGGGTCCAGCCTTCGGCATT +
Preference number: 4 (lower is better)
Translates to: WRFLMHIQGLHRLEGGLRTGSQQ*GPAFGI
Trigger: AATGCCGAAGGCTGGACCCCACTGCTGGCTGCCTGT...CCTGAGGCCCCCTTCTAGCCTGTGCAAACCCTGTATGTGCATTAAAAATCTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR CCA 90 bp TTTTTAATGCACATACAGGGTTTGCACAGGCTAGAAGGGGGCCTCAGGAGAGCCAACGCTGATGTTTCTTaGGGAGGGCCCCTGGCCAGA +
Preference number: 4 (lower is better)
Translates to: FLMHIQGLHRLEGGLRRANADVS*GGPLAR
Trigger: TCTGGCCAGGGGCCCTCCCCAAGAAACATCAGCGTT...GGCTCTCCTGAGGCCCCCTTCTAGCCTGTGCAAACCCTGTATGTGCATTAAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000275838.5
CDS-3UTR CCA 90 bp CAGACCTGGAGATTTTTAATGCACATACAGGGTTTGCACAGGCTAGAAGGGGGCTCCCAGCGATGTTGCTaGTGGACTGGGCAGGTGGGT +
Preference number: 4 (lower is better)
Translates to: QTWRFLMHIQGLHRLEGGSQRCC*WTGQVG
Trigger: ACCCACCTGCCCAGTCCACCAGCAACATCGCTGGGA...GCCCCCTTCTAGCCTGTGCAAACCCTGTATGTGCATTAAAAATCTCCAGGTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000377867.7
CDS-3UTR CCA 90 bp AGAGACCAGAGTCTCAGAGCACGGATGTTGAAGCGGAAATCCCTCCATCGCTCTTCTTTCCCCAGGGCATaGCTTGTTCTGGGAGAGCCA +
Preference number: 4 (lower is better)
Translates to: RDQSLRARMLKRKSLHRSSFPRA*LVLGEP
Trigger: TGGCTCTCCCAGAACAAGCCATGCCCTGGGGAAAGA...AGAGCGATGGAGGGATTTCCGCTTCAACATCCGTGCTCTGAGACTCTGGTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415615.1
CDS-3UTR CCA 90 bp ATGTTGAAGCGGAAATCCCTCCATCGCTCTGGGTCGCTGGTATCAAAGACGGAATGCAGGGCCATGTCTTaGCAGAGCAGTGGTGATGGC +
Preference number: 4 (lower is better)
Translates to: MLKRKSLHRSGSLVSKTECRAMS*QSSGDG
Trigger: GCCATCACCACTGCTCTGCCAAGACATGGCCCTGCA...TTCCGTCTTTGATACCAGCGACCCAGAGCGATGGAGGGATTTCCGCTTCAACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415615.1
CDS-3UTR TCA 90 bp TTCTTGGGCCAAGGTGTAGGCTATTGGGCAAGCTTTGAGGTCGGGGAGAAACAGATTCTGGGCTCCACATaGCTGTGTTCTTGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: FLGQGVGYWASFEVGEKQILGST*LCSWAK
Trigger: CTTGGCCCAAGAACACAGTCATGTGGAGCCCAGAAT...CTGTTTCTCCCCGACCTCAAAGCTTGCCCAATAGCCTACACCTTGGCCCAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415615.1
CDS-3UTR TCA 90 bp ACAGACCTGGAGATTTTTAATGCACATACAGGGTTTGCACAGGCTAGAAGGGGGCTCTCGCTCCAAACCTaGGGAGCAGCTCCGCACACT +
Preference number: 4 (lower is better)
Translates to: TDLEIFNAHTGFAQARRGLSLQT*GAAPHT
Trigger: AGTGTGCGGAGCTGCTCCTCAGGTTTGGAGCGAGAG...CCCCCTTCTAGCCTGTGCAAACCCTGTATGTGCATTAAAAATCTCCAGGTCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR TCA 90 bp CAGACCTGGAGATTTTTAATGCACATACAGGGTTTGCACAGGCTAGAAGGGGGCAGCGTCTGCTCCAGCTaGAAGCAGCAAGCTGCACAG +
Preference number: 4 (lower is better)
Translates to: QTWRFLMHIQGLHRLEGGSVCSS*KQQAAQ
Trigger: CTGTGCAGCTTGCTGCTTTCAGCTGGAGCAGACGCT...GCCCCCTTCTAGCCTGTGCAAACCCTGTATGTGCATTAAAAATCTCCAGGTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR CCA 90 bp TTCTTGGGCCAAGGTGTAGGCTATTGGGCAAGCTTTGAGGTCGGGGAGAAACAGCAAGGTGTAGGCTATTaGGCAAGCTTTGAGGTCGGG +
Preference number: 4 (lower is better)
Translates to: FLGQGVGYWASFEVGEKQQGVGY*ASFEVG
Trigger: CCCGACCTCAAAGCTTGCCCAATAGCCTACACCTTG...CTGTTTCTCCCCGACCTCAAAGCTTGCCCAATAGCCTACACCTTGGCCCAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415615.1
CDS-3UTR CCA 90 bp ACAGACCTGGAGATTTTTAATGCACATACAGGGTTTGCACAGGCTAGAAGGGGGGGCTGCCACATGCAGTaGGGTGGTCAGCTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: TDLEIFNAHTGFAQARRGGCHMQ*GGQLLF
Trigger: GAAGAGGAGCTGACCACCCCACTGCATGTGGCAGCC...CCCCCTTCTAGCCTGTGCAAACCCTGTATGTGCATTAAAAATCTCCAGGTCTGT
53% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR CCA 90 bp ACAGACCTGGAGATTTTTAATGCACATACAGGGTTTGCACAGGCTAGAAGGGGGGGGCGTTTCCCATCCTaGTCAGCGATGTTGGGGTCG +
Preference number: 4 (lower is better)
Translates to: TDLEIFNAHTGFAQARRGGRFPS*SAMLGS
Trigger: CGACCCCAACATCGCTGACCAGGATGGGAAACGCCC...CCCCCTTCTAGCCTGTGCAAACCCTGTATGTGCATTAAAAATCTCCAGGTCTGT
53% GC, longest homopolymer 8 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
3UTR CAA 72 bp AGCAGGAGCTATTCTGGGCTCCACATGACTGTGTTCTaGGGCCAAGGTGTAGGCTATTGGGCAAGCTTTGAG +
Preference number: 4 (lower is better)
Translates to: SRSYSGLHMTVF*GQGVGYWASFE
Trigger: CTCAAAGCTTGCCCAATAGCCTACACCTTGGCCCAAGAACACAGTCATGTGGAGCCCAGAATAGCTCCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415615.1
CDS-3UTR TCA 90 bp TTTTTAATGCACATACAGGGTTTGCACAGGCTAGAAGGGGGCCTCAGGAGAGCCTCAGAGCACGGATGTTaGAGCGGAAATCCCTCCATC +
Preference number: 4 (lower is better)
Translates to: FLMHIQGLHRLEGGLRRASEHGC*SGNPSI
Trigger: GATGGAGGGATTTCCGCTTCAACATCCGTGCTCTGA...GGCTCTCCTGAGGCCCCCTTCTAGCCTGTGCAAACCCTGTATGTGCATTAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000275838.5
ENST00000420175.3
CDS-3UTR GCA 90 bp TTTTTAATGCACATACAGGGTTTGCACAGGCTAGAAGGGGGCCTCAGGAGAGCCGTCGGTCCGCTTCTCTaGATTGGGAATTGCAGCATC +
Preference number: 4 (lower is better)
Translates to: FLMHIQGLHRLEGGLRRAVGPLL*IGNCSI
Trigger: GATGCTGCAATTCCCAATGCAGAGAAGCGGACCGAC...GGCTCTCCTGAGGCCCCCTTCTAGCCTGTGCAAACCCTGTATGTGCATTAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR CCA 90 bp CAGACCTGGAGATTTTTAATGCACATACAGGGTTTGCACAGGCTAGAAGGGGGCCCACATGCAGTGGGGTaGTCAGCTCCTCTTCGTATG +
Preference number: 4 (lower is better)
Translates to: QTWRFLMHIQGLHRLEGGPHAVG*SAPLRM
Trigger: CATACGAAGAGGAGCTGACCACCCCACTGCATGTGG...GCCCCCTTCTAGCCTGTGCAAACCCTGTATGTGCATTAAAAATCTCCAGGTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR CCA 90 bp TTTTTAATGCACATACAGGGTTTGCACAGGCTAGAAGGGGGCCTCAGGAGAGCCCCCCTTGCACTCTTCTaGAGACCAACTCATGAGCAT +
Preference number: 4 (lower is better)
Translates to: FLMHIQGLHRLEGGLRRAPLALF*RPTHEH
Trigger: ATGCTCATGAGTTGGTCTCCAGAAGAGTGCAAGGGG...GGCTCTCCTGAGGCCCCCTTCTAGCCTGTGCAAACCCTGTATGTGCATTAAAAA
51% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000275838.5
ENST00000420175.3
CDS-3UTR TCA 90 bp ACAGACCTGGAGATTTTTAATGCACATACAGGGTTTGCACAGGCTAGAAGGGGGTCAGAGCACGGATGTTaGAGCGGAAATCCCTCCATC +
Preference number: 4 (lower is better)
Translates to: TDLEIFNAHTGFAQARRGSEHGC*SGNPSI
Trigger: GATGGAGGGATTTCCGCTTCAACATCCGTGCTCTGA...CCCCCTTCTAGCCTGTGCAAACCCTGTATGTGCATTAAAAATCTCCAGGTCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000275838.5
ENST00000420175.3
CDS-3UTR CCA 90 bp ACAGACCTGGAGATTTTTAATGCACATACAGGGTTTGCACAGGCTAGAAGGGGGATCGCTCTGGGTCGCTaGTATCAAAGACGGAATCAG +
Preference number: 4 (lower is better)
Translates to: TDLEIFNAHTGFAQARRGIALGR*YQRRNQ
Trigger: CTGATTCCGTCTTTGATACCAGCGACCCAGAGCGAT...CCCCCTTCTAGCCTGTGCAAACCCTGTATGTGCATTAAAAATCTCCAGGTCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000275838.5
ENST00000420175.3
CDS-3UTR CCA 90 bp ACAGACCTGGAGATTTTTAATGCACATACAGGGTTTGCACAGGCTAGAAGGGGGCCTCTCAAAAGGCCATaGACATCTAGTAGAGCACGC +
Preference number: 4 (lower is better)
Translates to: TDLEIFNAHTGFAQARRGPLKRP*TSSRAR
Trigger: GCGTGCTCTACTAGATGTCCATGGCCTTTTGAGAGG...CCCCCTTCTAGCCTGTGCAAACCCTGTATGTGCATTAAAAATCTCCAGGTCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS TCA 90 bp AGCTGCACAGCTGCAGGCAGCGGGCGGTGGTGGCCTCGGCATCGGTaGTGGACTGGCAGCGGACGTCACAGGCAGCCAGCAGTGGGGTCC +
Preference number: 5 (lower is better)
Translates to: SCTAAGSGRWWPRHR*WTGSGRHRQPAVGS
Trigger: GGACCCCACTGCTGGCTGCCTGTGACGTCCGCTGCCAGTCCATCACCGATGCCGAGGCCACCACCGCCCGCTGCCTGCAGCTGTGCAGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS CCA 90 bp AGCTGCAGGCAGCGGGCGGTGGTGGCCTCGGCATCGGTGATGGACTaGCAGCGGACGTCACAGGCAGCCAGCAGTGGGGTCCAGCCTTCG +
Preference number: 5 (lower is better)
Translates to: SCRQRAVVASASVMD*QRTSQAASSGVQPS
Trigger: CGAAGGCTGGACCCCACTGCTGGCTGCCTGTGACGTCCGCTGCCAGTCCATCACCGATGCCGAGGCCACCACCGCCCGCTGCCTGCAGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS CCA 90 bp CAAAGCAGCACGACTCCCAGCGATGTTGCTGGTGGACTGGGCAGGTaGGTGCTGGGCCCGAGCTGGGTGGGGCCCAGCATGGGAGGCGCA +
Preference number: 5 (lower is better)
Translates to: QSSTTPSDVAGGLGR*VLGPSWVGPSMGGA
Trigger: TGCGCCTCCCATGCTGGGCCCCACCCAGCTCGGGCCCAGCACCCACCTGCCCAGTCCACCAGCAACATCGCTGGGAGTCGTGCTGCTTTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377867.7
CDS GCA 90 bp AGGAGCAGCTCCACGACAGCTGCATGGCCACGGCGGCAGGCCAGGTaGAGGGGTCGCTGCTTGTCCTGGTCCGCAGCATCAGCGTCTGCT +
Preference number: 5 (lower is better)
Translates to: RSSSTTAAWPRRQAR*RGRCLSWSAASASA
Trigger: AGCAGACGCTGATGCTGCGGACCAGGACAAGCAGCGACCCCTGCACCTGGCCTGCCGCCGTGGCCATGCAGCTGTCGTGGAGCTGCTCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS GCA 90 bp GGTGTTGGCGCTGACACCACAGGACAGGAGCAGCTCCACGACAGCTaGATGGCCACGGCGGCAGGCCAGGTGCAGGGGTCGCTGCTTGTC +
Preference number: 5 (lower is better)
Translates to: GVGADTTGQEQLHDS*MATAAGQVQGSLLV
Trigger: GACAAGCAGCGACCCCTGCACCTGGCCTGCCGCCGTGGCCATGCAGCTGTCGTGGAGCTGCTCCTGTCCTGTGGTGTCAGCGCCAACACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS CCA 90 bp TCTGGCCTTGCTCGCCGCCTCAGCAGCAGCCGCAGGACTTCCGTGTaGCCACGGCTGGCTGCCACATGCAGTGGGGTGGTCAGCTCCTCT +
Preference number: 5 (lower is better)
Translates to: SGLARRLSSSRRTSV*PRLAATCSGVVSSS
Trigger: AGAGGAGCTGACCACCCCACTGCATGTGGCAGCCAGCCGTGGCCACACGGAAGTCCTGCGGCTGCTGCTGAGGCGGCGAGCAAGGCCAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR CAA 90 bp CCTGCTGCCAGGGCTACCTGGCCTGAGTTAGTGCAGAGGCGCGCCCTCTGCAGGTCCTGGTCAGCGATGTaGGGGTCGGCTCCTGCCACC +
Preference number: 5 (lower is better)
Translates to: PAARATWPELVQRRALCRSWSAM*GSAPAT
Trigger: GGTGGCAGGAGCCGACCCCAACATCGCTGACCAGGA...CCTGCAGAGGGCGCGCCTCTGCACTAACTCAGGCCAGGTAGCCCTGGCAGCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS TCA 90 bp GGGTCGCTGCTTGTCCTGGTCCGCAGCATCAGCGTCTGCTCCAGCTaGAAGCAGCAAGCTGCACAGCTGCAGGCAGCGGGCGGTGGTGGC +
Preference number: 5 (lower is better)
Translates to: GSLLVLVRSISVCSS*KQQAAQLQAAGGGG
Trigger: GCCACCACCGCCCGCTGCCTGCAGCTGTGCAGCTTGCTGCTTTCAGCTGGAGCAGACGCTGATGCTGCGGACCAGGACAAGCAGCGACCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS GCA 90 bp ACGACAGCTGCATGGCCACGGCGGCAGGCCAGGTGCAGGGGTCGCTaGTTGTCCTGGTCCGCAGCATCAGCGTCTGCTCCAGCTGAAAGC +
Preference number: 5 (lower is better)
Translates to: TTAAWPRRQARCRGR*LSWSAASASAPAES
Trigger: GCTTTCAGCTGGAGCAGACGCTGATGCTGCGGACCAGGACAAGCAGCGACCCCTGCACCTGGCCTGCCGCCGTGGCCATGCAGCTGTCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS CCA 90 bp GCATGGCCACGGCGGCAGGCCAGGTGCAGGGGTCGCTGCTTGTCCTaGTCCGCAGCATCAGCGTCTGCTCCAGCTGAAAGCAGCAAGCTG +
Preference number: 5 (lower is better)
Translates to: AWPRRQARCRGRCLS*SAASASAPAESSKL
Trigger: CAGCTTGCTGCTTTCAGCTGGAGCAGACGCTGATGCTGCGGACCAGGACAAGCAGCGACCCCTGCACCTGGCCTGCCGCCGTGGCCATGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR CAA 90 bp CGCGCCCTCTGCAGGCTGGGGCATCTGCTTTCAGGCCCTCTCAAAAGGCCATGGGGGCACTGTCTGGCCTaGCTCGCCGCCTCAGCAGCA +
Preference number: 5 (lower is better)
Translates to: RALCRLGHLLSGPLKRPWGHCLA*LAASAA
Trigger: TGCTGCTGAGGCGGCGAGCAAGGCCAGACAGTGCCC...CCATGGCCTTTTGAGAGGGCCTGAAAGCAGATGCCCCAGCCTGCAGAGGGCGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR CAA 90 bp AGGGCTACCTGGCCTGAGTTAGTGCAGAGGCGCGCCCTCTGCAGGCTGGGGCATTCCTGGTCAGCGATGTaGGGGTCGGCTCCTGCCACC +
Preference number: 5 (lower is better)
Translates to: RATWPELVQRRALCRLGHSWSAM*GSAPAT
Trigger: GGTGGCAGGAGCCGACCCCAACATCGCTGACCAGGA...ATGCCCCAGCCTGCAGAGGGCGCGCCTCTGCACTAACTCAGGCCAGGTAGCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR CAA 90 bp AGGAGAGCCCCAGTAGGAGTGTGTCTTCATCAGACATCACCCGGCTGCCGCTGTGAGGCGGGGCAGCGCTaGGGGCAGGCTGCCCTCCAG +
Preference number: 5 (lower is better)
Translates to: RRAPVGVCLHQTSPGCRCEAGQR*GQAALQ
Trigger: CTGGAGGGCAGCCTGCCCCAAGCGCTGCCCCGCCTC...ACAGCGGCAGCCGGGTGATGTCTGATGAAGACACACTCCTACTGGGGCTCTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR CAA 90 bp TGTCGGTCCGCTTCTCTGCATTGGGAATTGCAGCATCCACACCTGCCTGCGGAGGAGGCGGGGCAGCGCTaGGGGCAGGCTGCCCTCCAG +
Preference number: 5 (lower is better)
Translates to: CRSASLHWELQHPHLPAEEAGQR*GQAALQ
Trigger: CTGGAGGGCAGCCTGCCCCAAGCGCTGCCCCGCCTC...CTCCGCAGGCAGGTGTGGATGCTGCAATTCCCAATGCAGAGAAGCGGACCGACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR CAA 90 bp GCTGCCAGGGCTACCTGGCCTGAGTTAGTGCAGAGGCGCGCCCTCTGCAGGCTGCGACTCCCAGCGATGTaGCTGGTGGACTGGGCAGGT +
Preference number: 5 (lower is better)
Translates to: AARATWPELVQRRALCRLRLPAM*LVDWAG
Trigger: ACCTGCCCAGTCCACCAGCAACATCGCTGGGAGTCG...CAGCCTGCAGAGGGCGCGCCTCTGCACTAACTCAGGCCAGGTAGCCCTGGCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377867.7
CDS-3UTR CAA 90 bp TCCGCTTCTCTGCATTGGGAATTGCAGCATCCACACCTGCCTGCGGAGCTGGGCCAGCGCTCCAGCACCTaGGGGAGGGCCCCTGGCCAG +
Preference number: 5 (lower is better)
Translates to: SASLHWELQHPHLPAELGQRSST*GRAPGQ
Trigger: CTGGCCAGGGGCCCTCCCCAAGGTGCTGGAGCGCTG...GCCCAGCTCCGCAGGCAGGTGTGGATGCTGCAATTCCCAATGCAGAGAAGCGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377867.7
ENST00000420175.3
CDS GCA 90 bp GCAGCATCAGCGTCTGCTCCAGCTGAAAGCAGCAAGCTGCACAGCTaGAGGCAGCGGGCGGTGGTGGCCTCGGCATCGGTGATGGACTGG +
Preference number: 5 (lower is better)
Translates to: AASASAPAESSKLHS*RQRAVVASASVMDW
Trigger: CCAGTCCATCACCGATGCCGAGGCCACCACCGCCCGCTGCCTGCAGCTGTGCAGCTTGCTGCTTTCAGCTGGAGCAGACGCTGATGCTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS CCA 90 bp CTCGCCGCCTCAGCAGCAGCCGCAGGACTTCCGTGTGGCCACGGCTaGCTGCCACATGCAGTGGGGTGGTCAGCTCCTCTTCGTATGTCA +
Preference number: 5 (lower is better)
Translates to: LAASAAAAGLPCGHG*LPHAVGWSAPLRMS
Trigger: TGACATACGAAGAGGAGCTGACCACCCCACTGCATGTGGCAGCCAGCCGTGGCCACACGGAAGTCCTGCGGCTGCTGCTGAGGCGGCGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR CAA 90 bp CTGTCGGTCCGCTTCTCTGCATTGGGAATTGCAGCATCCACACCTGCCTGCGGACAGCGCTCCAGCACCTaGGGGAGGGCCCCTGGCCAG +
Preference number: 5 (lower is better)
Translates to: LSVRFSALGIAASTPACGQRSST*GRAPGQ
Trigger: CTGGCCAGGGGCCCTCCCCAAGGTGCTGGAGCGCTG...TCCGCAGGCAGGTGTGGATGCTGCAATTCCCAATGCAGAGAAGCGGACCGACAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377867.7
ENST00000420175.3
CDS-3UTR CAA 90 bp ATCACCCGGCTGCCGCTGTCGGTCCGCTTCTCTGCATTGGGAATTGCAGCATCCGGGCACTGTCTGGCCTaGCTCGCCGCCTCAGCAGCA +
Preference number: 5 (lower is better)
Translates to: ITRLPLSVRFSALGIAASGHCLA*LAASAA
Trigger: TGCTGCTGAGGCGGCGAGCAAGGCCAGACAGTGCCC...GGATGCTGCAATTCCCAATGCAGAGAAGCGGACCGACAGCGGCAGCCGGGTGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR CAA 90 bp GCCCTCTGCAGGCTGGGGCATCTGCTTTCAGGCCCTCTCAAAAGGCCATGGACACGGACGGCGCCATGGTaGAGCAGAGCCCGAACCACG +
Preference number: 5 (lower is better)
Translates to: ALCRLGHLLSGPLKRPWTRTAPW*SRARTT
Trigger: CGTGGTTCGGGCTCTGCTCAACCATGGCGCCGTCCG...TGTCCATGGCCTTTTGAGAGGGCCTGAAAGCAGATGCCCCAGCCTGCAGAGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR CAA 90 bp AGCCCCAGTAGGAGTGTGTCTTCATCAGACATCACCCGGCTGCCGCTGTCGGTCCGGACGGCGCCATGGTaGAGCAGAGCCCGAACCACG +
Preference number: 5 (lower is better)
Translates to: SPSRSVSSSDITRLPLSVRTAPW*SRARTT
Trigger: CGTGGTTCGGGCTCTGCTCAACCATGGCGCCGTCCG...GACCGACAGCGGCAGCCGGGTGATGTCTGATGAAGACACACTCCTACTGGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS TCA 90 bp CACAGTGCAGGGGCGTGTGTCCCCCATAGTCCATGGTGTTGGCGCTaGCACCACAGGACAGGAGCAGCTCCACGACAGCTGCATGGCCAC +
Preference number: 5 (lower is better)
Translates to: HSAGACVPHSPWCWR*HHRTGAAPRQLHGH
Trigger: GTGGCCATGCAGCTGTCGTGGAGCTGCTCCTGTCCTGTGGTGTCAGCGCCAACACCATGGACTATGGGGGACACACGCCCCTGCACTGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS GCA 90 bp CAGGGGGCGTTTCCCATCCTGGTCAGCGATGTTGGGGTCGGCTCCTaGCACCAGCAGCACATGAACACAGGCAGTGTGGCCTGCAGCACA +
Preference number: 5 (lower is better)
Translates to: QGAFPILVSDVGVGS*HQQHMNTGSVACST
Trigger: TGTGCTGCAGGCCACACTGCCTGTGTTCATGTGCTGCTGGTGGCAGGAGCCGACCCCAACATCGCTGACCAGGATGGGAAACGCCCCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS CCA 90 bp CCCGGCAGAGATGCAGGGGGCGTTTCCCATCCTGGTCAGCGATGTTaGGGTCGGCTCCTGCCACCAGCAGCACATGAACACAGGCAGTGT +
Preference number: 5 (lower is better)
Translates to: PGRDAGGVSHPGQRC*GRLLPPAAHEHRQC
Trigger: ACACTGCCTGTGTTCATGTGCTGCTGGTGGCAGGAGCCGACCCCAACATCGCTGACCAGGATGGGAAACGCCCCCTGCATCTCTGCCGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS CCA 90 bp CCAGGTGGGAGCGGAGCGCACAGCGGCTCAAATGCTGCAGCGACCTaGGCTGCCTCACCAAGGCGAAGAGGGAGGAGTAGAAACGCTGAT +
Preference number: 5 (lower is better)
Translates to: PGGSGAHSGSNAAAT*AASPRRRGRSRNAD
Trigger: ATCAGCGTTTCTACTCCTCCCTCTTCGCCTTGGTGAGGCAGCCCAGGTCGCTGCAGCATTTGAGCCGCTGTGCGCTCCGCTCCCACCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS CCA 90 bp CAGCCGCAGGACTTCCGTGTGGCCACGGCTGGCTGCCACATGCAGTaGGGTGGTCAGCTCCTCTTCGTATGTCAGAGACCAGAGTCCCCT +
Preference number: 5 (lower is better)
Translates to: QPQDFRVATAGCHMQ*GGQLLFVCQRPESP
Trigger: AGGGGACTCTGGTCTCTGACATACGAAGAGGAGCTGACCACCCCACTGCATGTGGCAGCCAGCCGTGGCCACACGGAAGTCCTGCGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377867.7
CDS CCA 90 bp CCTCGGGAAGCTGCACAACACTGTAGGTGTTCATCAGGACCTCGATaGTCCGAGGGCACGTGCTCCAGCGCTCCAGCACCTTGGGGAGGG +
Preference number: 5 (lower is better)
Translates to: PREAAQHCRCSSGPR*SEGTCSSAPAPWGG
Trigger: CCCTCCCCAAGGTGCTGGAGCGCTGGAGCACGTGCCCTCGGACCATCGAGGTCCTGATGAACACCTACAGTGTTGTGCAGCTTCCCGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377867.7
ENST00000420175.3
CDS-3UTR CAA 90 bp CGGTCCGCTTCTCTGCATTGGGAATTGCAGCATCCACACCTGCCTGCGGAGCTGGGTCCCGGGCCAGACTaGAGGTGCTCCTCAGACCCT +
Preference number: 5 (lower is better)
Translates to: RSASLHWELQHPHLPAELGPGPD*RCSSDP
Trigger: AGGGTCTGAGGAGCACCTCAAGTCTGGCCCGGGACC...CAGCTCCGCAGGCAGGTGTGGATGCTGCAATTCCCAATGCAGAGAAGCGGACCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275838.5
ENST00000420175.3
CDS-3UTR CAA 90 bp GTCTTCATCAGACATCACCCGGCTGCCGCTGTCGGTCCGCTTCTCTGCATTGGGTCCTGGTCAGCGATGTaGGGGTCGGCTCCTGCCACC +
Preference number: 5 (lower is better)
Translates to: VFIRHHPAAAVGPLLCIGSWSAM*GSAPAT
Trigger: GGTGGCAGGAGCCGACCCCAACATCGCTGACCAGGA...CCCAATGCAGAGAAGCGGACCGACAGCGGCAGCCGGGTGATGTCTGATGAAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR CAA 90 bp TGTCTTCATCAGACATCACCCGGCTGCCGCTGTCGGTCCGCTTCTCTGCATTGGCGGACGGCGCCATGGTaGAGCAGAGCCCGAACCACG +
Preference number: 5 (lower is better)
Translates to: CLHQTSPGCRCRSASLHWRTAPW*SRARTT
Trigger: CGTGGTTCGGGCTCTGCTCAACCATGGCGCCGTCCG...CCAATGCAGAGAAGCGGACCGACAGCGGCAGCCGGGTGATGTCTGATGAAGACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS GCA 90 bp AGCAGCAGCCGCAGGACTTCCGTGTGGCCACGGCTGGCTGCCACATaGAGTGGGGTGGTCAGCTCCTCTTCGTATGTCAGAGACCAGAGT +
Preference number: 5 (lower is better)
Translates to: SSSRRTSVWPRLAAT*SGVVSSSSYVRDQS
Trigger: ACTCTGGTCTCTGACATACGAAGAGGAGCTGACCACCCCACTGCATGTGGCAGCCAGCCGTGGCCACACGGAAGTCCTGCGGCTGCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS CCA 90 bp CAGCCGCAGGACTTCCGTGTGGCCACGGCTGGCTGCCACATGCAGTaGGGTGGTCAGCTCCTCTTCGTATGTCAGAGACCAGAGTCTCAG +
Preference number: 5 (lower is better)
Translates to: QPQDFRVATAGCHMQ*GGQLLFVCQRPESQ
Trigger: CTGAGACTCTGGTCTCTGACATACGAAGAGGAGCTGACCACCCCACTGCATGTGGCAGCCAGCCGTGGCCACACGGAAGTCCTGCGGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275838.5
ENST00000420175.3
CDS CCA 90 bp GCAGGACTTCCGTGTGGCCACGGCTGGCTGCCACATGCAGTGGGGTaGTCAGCTCCTCTTCGTATGTCAGAGACCAGAGTCCCCTCTGGT +
Preference number: 5 (lower is better)
Translates to: AGLPCGHGWLPHAVG*SAPLRMSETRVPSG
Trigger: ACCAGAGGGGACTCTGGTCTCTGACATACGAAGAGGAGCTGACCACCCCACTGCATGTGGCAGCCAGCCGTGGCCACACGGAAGTCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377867.7
CDS-3UTR CAA 90 bp TCCGCTTCTCTGCATTGGGAATTGCAGCATCCACACCTGCCTGCGGAGCTGGGCGTCCAGCCTTCGGCATaGCGGGCATCAGGACATGCC +
Preference number: 5 (lower is better)
Translates to: SASLHWELQHPHLPAELGVQPSA*RASGHA
Trigger: GGCATGTCCTGATGCCCGCAATGCCGAAGGCTGGAC...GCCCAGCTCCGCAGGCAGGTGTGGATGCTGCAATTCCCAATGCAGAGAAGCGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR CAA 90 bp GCCCTCTGCAGGCTGGGGCATCTGCTTTCAGGCCCTCTCAAAAGGCCATGGACAGTCCAGCCTTCGGCATaGCGGGCATCAGGACATGCC +
Preference number: 5 (lower is better)
Translates to: ALCRLGHLLSGPLKRPWTVQPSA*RASGHA
Trigger: GGCATGTCCTGATGCCCGCAATGCCGAAGGCTGGAC...TGTCCATGGCCTTTTGAGAGGGCCTGAAAGCAGATGCCCCAGCCTGCAGAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR CAA 90 bp TCCGCTTCTCTGCATTGGGAATTGCAGCATCCACACCTGCCTGCGGAGCTGGGCTGCAGGGGTCGCTGCTaGTCCTGGTCCGCAGCATCA +
Preference number: 5 (lower is better)
Translates to: SASLHWELQHPHLPAELGCRGRC*SWSAAS
Trigger: TGATGCTGCGGACCAGGACAAGCAGCGACCCCTGCA...GCCCAGCTCCGCAGGCAGGTGTGGATGCTGCAATTCCCAATGCAGAGAAGCGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR CAA 90 bp TTTTTAATGCACATACAGGGTTTGCACAGGCTAGAAGGGGGCCTCAGGAGAGCCGAGGCGGGGCAGCGCTaGGGGCAGGCTGCCCTCCAG +
Preference number: 5 (lower is better)
Translates to: FLMHIQGLHRLEGGLRRAEAGQR*GQAALQ
Trigger: CTGGAGGGCAGCCTGCCCCAAGCGCTGCCCCGCCTC...GGCTCTCCTGAGGCCCCCTTCTAGCCTGTGCAAACCCTGTATGTGCATTAAAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS GCA 90 bp ACCAGCCTGGCACAGAGGGGGTGTCTGTCATCGAGGGGCTCTCCCTaGCCCTTGCACTCTTCTGGAGACCAACTCATGAGCATGTGGGCA +
Preference number: 5 (lower is better)
Translates to: TSLAQRGCLSSRGSP*PLHSSGDQLMSMWA
Trigger: TGCCCACATGCTCATGAGTTGGTCTCCAGAAGAGTGCAAGGGGCAGGGAGAGCCCCTCGATGACAGACACCCCCTCTGTGCCAGGCTGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275838.5
ENST00000420175.3
CDS GCA 90 bp AGAAGCAGATCTGCCAGCTCCACATGGCCAAGCCGGGCGGCCACATaGAAAGGGGTCTCCTCTTCTTCCTCGGACCGACCATCCACTCTC +
Preference number: 5 (lower is better)
Translates to: RSRSASSTWPSRAAT*KGVSSSSSDRPSTL
Trigger: GAGAGTGGATGGTCGGTCCGAGGAAGAAGAGGAGACCCCTTTGCATGTGGCCGCCCGGCTTGGCCATGTGGAGCTGGCAGATCTGCTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS CCA 90 bp ACAGACAGACAGAAGGCCCCTGTGTCCCACGCTCCGAGGCTGACCTaGCCACGCATCCAGCAGGAGCTATTCTGGGCTCCACATGACTGT +
Preference number: 5 (lower is better)
Translates to: TDRQKAPVSHAPRLT*PRIQQELFWAPHDC
Trigger: ACAGTCATGTGGAGCCCAGAATAGCTCCTGCTGGATGCGTGGCCAGGTCAGCCTCGGAGCGTGGGACACAGGGGCCTTCTGTCTGTCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275838.5
CDS CCA 90 bp GCAGGACTTCCGTGTGGCCACGGCTGGCTGCCACATGCAGTGGGGTaGTCAGCTCCTCTTCGTATGTCAGAGACCAGAGTCTCAGAGCAC +
Preference number: 5 (lower is better)
Translates to: AGLPCGHGWLPHAVG*SAPLRMSETRVSEH
Trigger: GTGCTCTGAGACTCTGGTCTCTGACATACGAAGAGGAGCTGACCACCCCACTGCATGTGGCAGCCAGCCGTGGCCACACGGAAGTCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275838.5
ENST00000420175.3
CDS-3UTR CAA 90 bp GGTCCTGAGGCTGTGCGGGTGACGATGGGTCCCGGGCCAGACTTGAGGTGCTCCCACATGACTGTGTTCTaGGGCCAAGGTGTAGGCTAT +
Preference number: 5 (lower is better)
Translates to: GPEAVRVTMGPGPDLRCSHMTVF*GQGVGY
Trigger: ATAGCCTACACCTTGGCCCAAGAACACAGTCATGTG...GGAGCACCTCAAGTCTGGCCCGGGACCCATCGTCACCCGCACAGCCTCAGGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415615.1
CDS-3UTR CAA 90 bp GAGGCGCGCCCTCTGCAGGCTGGGGCATCTGCTTTCAGGCCCTCTCAAAAGGCCCTCAGAGCACGGATGTaGAAGCGGAAATCCCTCCAT +
Preference number: 5 (lower is better)
Translates to: EARPLQAGASAFRPSQKALRARM*KRKSLH
Trigger: ATGGAGGGATTTCCGCTTCAACATCCGTGCTCTGAG...GGCCTTTTGAGAGGGCCTGAAAGCAGATGCCCCAGCCTGCAGAGGGCGCGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275838.5
ENST00000420175.3
CDS-3UTR CAA 90 bp CCCGGGCCAGACTTGAGGTGCTCCTCAGACCCTCTGCTGGGCTTCTCCACCAGCCTCAGAGCACGGATGTaGAAGCGGAAATCCCTCCAT +
Preference number: 5 (lower is better)
Translates to: PGPDLRCSSDPLLGFSTSLRARM*KRKSLH
Trigger: ATGGAGGGATTTCCGCTTCAACATCCGTGCTCTGAG...GCTGGTGGAGAAGCCCAGCAGAGGGTCTGAGGAGCACCTCAAGTCTGGCCCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415615.1
CDS-3UTR CAA 90 bp CTGTCGGTCCGCTTCTCTGCATTGGGAATTGCAGCATCCACACCTGCCTGCGGAGTCCAGCCTTCGGCATaGCGGGCATCAGGACATGCC +
Preference number: 5 (lower is better)
Translates to: LSVRFSALGIAASTPACGVQPSA*RASGHA
Trigger: GGCATGTCCTGATGCCCGCAATGCCGAAGGCTGGAC...TCCGCAGGCAGGTGTGGATGCTGCAATTCCCAATGCAGAGAAGCGGACCGACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR CAA 90 bp ATCAGACATCACCCGGCTGCCGCTGTCGGTCCGCTTCTCTGCATTGGGAATTGCTGCAGGGGTCGCTGCTaGTCCTGGTCCGCAGCATCA +
Preference number: 5 (lower is better)
Translates to: IRHHPAAAVGPLLCIGNCCRGRC*SWSAAS
Trigger: TGATGCTGCGGACCAGGACAAGCAGCGACCCCTGCA...GCAATTCCCAATGCAGAGAAGCGGACCGACAGCGGCAGCCGGGTGATGTCTGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR CAA 90 bp TGTCGGTCCGCTTCTCTGCATTGGGAATTGCAGCATCCACACCTGCCTGCGGAGTGCAGGGGTCGCTGCTaGTCCTGGTCCGCAGCATCA +
Preference number: 5 (lower is better)
Translates to: CRSASLHWELQHPHLPAECRGRC*SWSAAS
Trigger: TGATGCTGCGGACCAGGACAAGCAGCGACCCCTGCA...CTCCGCAGGCAGGTGTGGATGCTGCAATTCCCAATGCAGAGAAGCGGACCGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR CAA 90 bp GAGGCGCGCCCTCTGCAGGCTGGGGCATCTGCTTTCAGGCCCTCTCAAAAGGCCTCTCTGCATTGGGAATaGCAGCATCCACACCTGCCT +
Preference number: 5 (lower is better)
Translates to: EARPLQAGASAFRPSQKASLHWE*QHPHLP
Trigger: AGGCAGGTGTGGATGCTGCAATTCCCAATGCAGAGA...GGCCTTTTGAGAGGGCCTGAAAGCAGATGCCCCAGCCTGCAGAGGGCGCGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR CAA 90 bp GAGGCGCGCCCTCTGCAGGCTGGGGCATCTGCTTTCAGGCCCTCTCAAAAGGCCGTCCGCTTCTCTGCATaGGGAATTGCAGCATCCACA +
Preference number: 5 (lower is better)
Translates to: EARPLQAGASAFRPSQKAVRFSA*GIAAST
Trigger: TGTGGATGCTGCAATTCCCAATGCAGAGAAGCGGAC...GGCCTTTTGAGAGGGCCTGAAAGCAGATGCCCCAGCCTGCAGAGGGCGCGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR CAA 90 bp CAAAGACGGAATCAGGAGCCAGGCCAGTACTGGAGTCCGCGAGGATGCGGGAGATCCCCAGGGCATGGCTaGTTCTGGGAGAGCCAAAGC +
Preference number: 5 (lower is better)
Translates to: QRRNQEPGQYWSPRGCGRSPGHG*FWESQS
Trigger: GCTTTGGCTCTCCCAGAACAAGCCATGCCCTGGGGA...TCTCCCGCATCCTCGCGGACTCCAGTACTGGCCTGGCTCCTGATTCCGTCTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415615.1
CDS TCA 90 bp GAAATACAGACAGACAGAAGGCCCCTGTGTCCCACGCTCCGAGGCTaGCCTGGCCACGCATCCAGCAGGAGCTATTCTGGGCTCCACATG +
Preference number: 5 (lower is better)
Translates to: EIQTDRRPLCPTLRG*PGHASSRSYSGLHM
Trigger: CATGTGGAGCCCAGAATAGCTCCTGCTGGATGCGTGGCCAGGTCAGCCTCGGAGCGTGGGACACAGGGGCCTTCTGTCTGTCTGTATTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275838.5
CDS-3UTR CAA 90 bp GTGTGTCTTCATCAGACATCACCCGGCTGCCGCTGTCGGTCCGCTTCTCTGCATTCCCCAGGGCATGGCTaGTTCTGGGAGAGCCAAAGC +
Preference number: 5 (lower is better)
Translates to: VCLHQTSPGCRCRSASLHSPGHG*FWESQS
Trigger: GCTTTGGCTCTCCCAGAACAAGCCATGCCCTGGGGA...ATGCAGAGAAGCGGACCGACAGCGGCAGCCGGGTGATGTCTGATGAAGACACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377867.7
CDS CCA 90 bp CACGCTCCGAGGCTGACCTGGCCACGCATCCAGCAGGAGCTATTCTaGGCTCCACATGACTGTGTTCTTGGGCCAAGGTGTAGGCTATTG +
Preference number: 5 (lower is better)
Translates to: HAPRLTWPRIQQELF*APHDCVLGPRCRLL
Trigger: CAATAGCCTACACCTTGGCCCAAGAACACAGTCATGTGGAGCCCAGAATAGCTCCTGCTGGATGCGTGGCCAGGTCAGCCTCGGAGCGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275838.5
CDS-3UTR CAA 90 bp TCCGCTTCTCTGCATTGGGAATTGCAGCATCCACACCTGCCTGCGGAGCTGGGCGCTATTGGGCAAGCTTaGAGGTCGGGGAGAAACAGC +
Preference number: 5 (lower is better)
Translates to: SASLHWELQHPHLPAELGAIGQA*RSGRNS
Trigger: GCTGTTTCTCCCCGACCTCAAAGCTTGCCCAATAGC...GCCCAGCTCCGCAGGCAGGTGTGGATGCTGCAATTCCCAATGCAGAGAAGCGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275838.5
CDS-3UTR CAA 90 bp CAAAGACGGAATCAGGAGCCAGGCCAGTACTGGAGTCCGCGAGGATGCGGGAGAGCTATTGGGCAAGCTTaGAGGTCGGGGAGAAACAGC +
Preference number: 5 (lower is better)
Translates to: QRRNQEPGQYWSPRGCGRAIGQA*RSGRNS
Trigger: GCTGTTTCTCCCCGACCTCAAAGCTTGCCCAATAGC...TCTCCCGCATCCTCGCGGACTCCAGTACTGGCCTGGCTCCTGATTCCGTCTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415615.1
CDS-3UTR CAA 90 bp GCCCTCTGCAGGCTGGGGCATCTGCTTTCAGGCCCTCTCAAAAGGCCATGGACATCTCTGCATTGGGAATaGCAGCATCCACACCTGCCT +
Preference number: 5 (lower is better)
Translates to: ALCRLGHLLSGPLKRPWTSLHWE*QHPHLP
Trigger: AGGCAGGTGTGGATGCTGCAATTCCCAATGCAGAGA...TGTCCATGGCCTTTTGAGAGGGCCTGAAAGCAGATGCCCCAGCCTGCAGAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR CAA 90 bp TCCGCTTCTCTGCATTGGGAATTGCAGCATCCACACCTGCCTGCGGAGCTGGGCGTCCGCTTCTCTGCATaGGGAATTGCAGCATCCACA +
Preference number: 5 (lower is better)
Translates to: SASLHWELQHPHLPAELGVRFSA*GIAAST
Trigger: TGTGGATGCTGCAATTCCCAATGCAGAGAAGCGGAC...GCCCAGCTCCGCAGGCAGGTGTGGATGCTGCAATTCCCAATGCAGAGAAGCGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR CAA 90 bp GTGTGTCTTCATCAGACATCACCCGGCTGCCGCTGTCGGTCCGCTTCTCTGCATATGCACATACAGGGTTaGCACAGGCTAGAAGGGGGC +
Preference number: 5 (lower is better)
Translates to: VCLHQTSPGCRCRSASLHMHIQG*HRLEGG
Trigger: GCCCCCTTCTAGCCTGTGCAAACCCTGTATGTGCAT...ATGCAGAGAAGCGGACCGACAGCGGCAGCCGGGTGATGTCTGATGAAGACACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR CAA 90 bp GTGTGTCTTCATCAGACATCACCCGGCTGCCGCTGTCGGTCCGCTTCTCTGCATCTCAGAGCACGGATGTaGAAGCGGAAATCCCTCCAT +
Preference number: 5 (lower is better)
Translates to: VCLHQTSPGCRCRSASLHLRARM*KRKSLH
Trigger: ATGGAGGGATTTCCGCTTCAACATCCGTGCTCTGAG...ATGCAGAGAAGCGGACCGACAGCGGCAGCCGGGTGATGTCTGATGAAGACACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275838.5
ENST00000420175.3
CDS TCA 90 bp CATGACTGTGTTCTTGGGCCAAGGTGTAGGCTATTGGGCAAGCTTTaGGGTCGGGGAGAAACAGCCGGGGGCTTCTCCTTTCACTCAAGC +
Preference number: 5 (lower is better)
Translates to: HDCVLGPRCRLLGKL*GRGETAGGFSFHSS
Trigger: GCTTGAGTGAAAGGAGAAGCCCCCGGCTGTTTCTCCCCGACCTCAAAGCTTGCCCAATAGCCTACACCTTGGCCCAAGAACACAGTCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275838.5
ENST00000415615.1
CDS-3UTR CAA 90 bp TGTCTTCATCAGACATCACCCGGCTGCCGCTGTCGGTCCGCTTCTCTGCATTGGCACATGACTGTGTTCTaGGGCCAAGGTGTAGGCTAT +
Preference number: 5 (lower is better)
Translates to: CLHQTSPGCRCRSASLHWHMTVF*GQGVGY
Trigger: ATAGCCTACACCTTGGCCCAAGAACACAGTCATGTG...CCAATGCAGAGAAGCGGACCGACAGCGGCAGCCGGGTGATGTCTGATGAAGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275838.5
CDS-3UTR CAA 90 bp TTTTTAATGCACATACAGGGTTTGCACAGGCTAGAAGGGGGCCTCAGGAGAGCCTCTCTGCATTGGGAATaGCAGCATCCACACCTGCCT +
Preference number: 5 (lower is better)
Translates to: FLMHIQGLHRLEGGLRRASLHWE*QHPHLP
Trigger: AGGCAGGTGTGGATGCTGCAATTCCCAATGCAGAGA...GGCTCTCCTGAGGCCCCCTTCTAGCCTGTGCAAACCCTGTATGTGCATTAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR CAA 90 bp GAGATTTTTAATGCACATACAGGGTTTGCACAGGCTAGAAGGGGGCCTCAGGAGATGCACATACAGGGTTaGCACAGGCTAGAAGGGGGC +
Preference number: 5 (lower is better)
Translates to: EIFNAHTGFAQARRGPQEMHIQG*HRLEGG
Trigger: GCCCCCTTCTAGCCTGTGCAAACCCTGTATGTGCAT...CTCCTGAGGCCCCCTTCTAGCCTGTGCAAACCCTGTATGTGCATTAAAAATCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR CAA 90 bp CAGACCTGGAGATTTTTAATGCACATACAGGGTTTGCACAGGCTAGAAGGGGGCGTCCGCTTCTCTGCATaGGGAATTGCAGCATCCACA +
Preference number: 5 (lower is better)
Translates to: QTWRFLMHIQGLHRLEGGVRFSA*GIAAST
Trigger: TGTGGATGCTGCAATTCCCAATGCAGAGAAGCGGAC...GCCCCCTTCTAGCCTGTGCAAACCCTGTATGTGCATTAAAAATCTCCAGGTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS-3UTR CAA 90 bp ACAGACCTGGAGATTTTTAATGCACATACAGGGTTTGCACAGGCTAGAAGGGGGATGCACATACAGGGTTaGCACAGGCTAGAAGGGGGC +
Preference number: 5 (lower is better)
Translates to: TDLEIFNAHTGFAQARRGMHIQG*HRLEGG
Trigger: GCCCCCTTCTAGCCTGTGCAAACCCTGTATGTGCAT...CCCCCTTCTAGCCTGTGCAAACCCTGTATGTGCATTAAAAATCTCCAGGTCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS GCA 72 bp CAGGGCGGTGCGGCCCCCAGGGGCACTGTCTGGCCTTaGTCGCCGCCTCAGCAGCAGCCGCAGGACTTCCGT +
Preference number: 6 (lower is better)
Translates to: QGGAAPRGTVWP*SPPQQQPQDFR
Trigger: ACGGAAGTCCTGCGGCTGCTGCTGAGGCGGCGAGCAAGGCCAGACAGTGCCCCTGGGGGCCGCACCGCCCTG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS TCA 72 bp GGAGGGCCCCTGGCCAGACACGGACGGCGCCATGGTTaGGCAGAGCCCGAACCACGTGCTCGGGGCTCTGGG +
Preference number: 6 (lower is better)
Translates to: GGPLARHGRRHG*AEPEPRARGSG
Trigger: CCCAGAGCCCCGAGCACGTGGTTCGGGCTCTGCTCAACCATGGCGCCGTCCGTGTCTGGCCAGGGGCCCTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS GCA 72 bp CCCCTCACCCCTCTGGTGGCTGCTCCAGCGAGGCTCTaGGGCCCGGCTCTCCAGCAGCAGGTCGGCTGTGCT +
Preference number: 6 (lower is better)
Translates to: PLTPLVAAPARL*GPALQQQVGCA
Trigger: AGCACAGCCGACCTGCTGCTGGAGAGCCGGGCCGCAGAGCCTCGCTGGAGCAGCCACCAGAGGGGTGAGGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415615.1
CDS CAA 72 bp GGGAGGGCCCCTGGCCAGACACGGACGGCGCCATGGTaGAGCAGAGCCCGAACCACGTGCTCGGGGCTCTGG +
Preference number: 6 (lower is better)
Translates to: GRAPGQTRTAPW*SRARTTCSGLW
Trigger: CCAGAGCCCCGAGCACGTGGTTCGGGCTCTGCTCAACCATGGCGCCGTCCGTGTCTGGCCAGGGGCCCTCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS TCA 72 bp GCTGCAGGCAGCGGGCGGTGGTGGCCTCGGCATCGGTaGTGGACTGGCAGCGGACGTCACAGGCAGCCAGCA +
Preference number: 6 (lower is better)
Translates to: AAGSGRWWPRHR*WTGSGRHRQPA
Trigger: TGCTGGCTGCCTGTGACGTCCGCTGCCAGTCCATCACCGATGCCGAGGCCACCACCGCCCGCTGCCTGCAGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS GCA 72 bp CCAGAGTCCCCTCTGGTGGCTGCTCCAGCGAGGCTCTaGGGCCCGGCTCTCCAGCAGCAGGTCGGCTGTGCT +
Preference number: 6 (lower is better)
Translates to: PESPLVAAPARL*GPALQQQVGCA
Trigger: AGCACAGCCGACCTGCTGCTGGAGAGCCGGGCCGCAGAGCCTCGCTGGAGCAGCCACCAGAGGGGACTCTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377867.7
CDS CCA 72 bp GCTCGCCGCCTCAGCAGCAGCCGCAGGACTTCCGTGTaGCCACGGCTGGCTGCCACATGCAGTGGGGTGGTC +
Preference number: 6 (lower is better)
Translates to: ARRLSSSRRTSV*PRLAATCSGVV
Trigger: GACCACCCCACTGCATGTGGCAGCCAGCCGTGGCCACACGGAAGTCCTGCGGCTGCTGCTGAGGCGGCGAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS CCA 72 bp CAGCGGGCGGTGGTGGCCTCGGCATCGGTGATGGACTaGCAGCGGACGTCACAGGCAGCCAGCAGTGGGGTC +
Preference number: 6 (lower is better)
Translates to: QRAVVASASVMD*QRTSQAASSGV
Trigger: GACCCCACTGCTGGCTGCCTGTGACGTCCGCTGCCAGTCCATCACCGATGCCGAGGCCACCACCGCCCGCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS GCA 72 bp GCATGGCCACGGCGGCAGGCCAGGTGCAGGGGTCGCTaGTTGTCCTGGTCCGCAGCATCAGCGTCTGCTCCA +
Preference number: 6 (lower is better)
Translates to: AWPRRQARCRGR*LSWSAASASAP
Trigger: TGGAGCAGACGCTGATGCTGCGGACCAGGACAAGCAGCGACCCCTGCACCTGGCCTGCCGCCGTGGCCATGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS GCA 72 bp GCTGACACCACAGGACAGGAGCAGCTCCACGACAGCTaGATGGCCACGGCGGCAGGCCAGGTGCAGGGGTCG +
Preference number: 6 (lower is better)
Translates to: ADTTGQEQLHDS*MATAAGQVQGS
Trigger: CGACCCCTGCACCTGGCCTGCCGCCGTGGCCATGCAGCTGTCGTGGAGCTGCTCCTGTCCTGTGGTGTCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS CAA 72 bp TGGCCACGGCGGCAGGCCAGGTGCAGGGGTCGCTGCTaGTCCTGGTCCGCAGCATCAGCGTCTGCTCCAGCT +
Preference number: 6 (lower is better)
Translates to: WPRRQARCRGRC*SWSAASASAPA
Trigger: AGCTGGAGCAGACGCTGATGCTGCGGACCAGGACAAGCAGCGACCCCTGCACCTGGCCTGCCGCCGTGGCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS GCA 72 bp GCGTCTGCTCCAGCTGAAAGCAGCAAGCTGCACAGCTaGAGGCAGCGGGCGGTGGTGGCCTCGGCATCGGTG +
Preference number: 6 (lower is better)
Translates to: ASAPAESSKLHS*RQRAVVASASV
Trigger: CACCGATGCCGAGGCCACCACCGCCCGCTGCCTGCAGCTGTGCAGCTTGCTGCTTTCAGCTGGAGCAGACGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS GCA 72 bp TCCACGACAGCTGCATGGCCACGGCGGCAGGCCAGGTaGAGGGGTCGCTGCTTGTCCTGGTCCGCAGCATCA +
Preference number: 6 (lower is better)
Translates to: STTAAWPRRQAR*RGRCLSWSAAS
Trigger: TGATGCTGCGGACCAGGACAAGCAGCGACCCCTGCACCTGGCCTGCCGCCGTGGCCATGCAGCTGTCGTGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS GCA 72 bp CCCTCCAGGTGGGAGCGGAGCGCACAGCGGCTCAAATaGTGCAGCGACCTGGGCTGCCTCACCAAGGCGAAG +
Preference number: 6 (lower is better)
Translates to: PSRWERSAQRLK*CSDLGCLTKAK
Trigger: CTTCGCCTTGGTGAGGCAGCCCAGGTCGCTGCAGCATTTGAGCCGCTGTGCGCTCCGCTCCCACCTGGAGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS CAA 90 bp ACAGCTGCATGGCCACGGCGGCAGGCCAGGTGCAGGGGTCGCTGCTaGTCCTGGTCCGCAGCATCAGCGTCTGCTCCAGCTGAAAGCAGC +
Preference number: 6 (lower is better)
Translates to: TAAWPRRQARCRGRC*SWSAASASAPAESS
Trigger: GCTGCTTTCAGCTGGAGCAGACGCTGATGCTGCGGACCAGGACAAGCAGCGACCCCTGCACCTGGCCTGCCGCCGTGGCCATGCAGCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS GCA 72 bp CAGCATCAGCGTCTGCTCCAGCTGAAAGCAGCAAGCTaGACAGCTGCAGGCAGCGGGCGGTGGTGGCCTCGG +
Preference number: 6 (lower is better)
Translates to: QHQRLLQLKAAS*TAAGSGRWWPR
Trigger: CCGAGGCCACCACCGCCCGCTGCCTGCAGCTGTGCAGCTTGCTGCTTTCAGCTGGAGCAGACGCTGATGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS GCA 72 bp TCCAGGTGGGAGCGGAGCGCACAGCGGCTCAAATGCTaGAGCGACCTGGGCTGCCTCACCAAGGCGAAGAGG +
Preference number: 6 (lower is better)
Translates to: SRWERSAQRLKC*SDLGCLTKAKR
Trigger: CCTCTTCGCCTTGGTGAGGCAGCCCAGGTCGCTGCAGCATTTGAGCCGCTGTGCGCTCCGCTCCCACCTGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS GCA 72 bp TCCGCACACTCAAGGGTGCCAGGCCCCCGGCAGAGATaGAGGGGGCGTTTCCCATCCTGGTCAGCGATGTTG +
Preference number: 6 (lower is better)
Translates to: SAHSRVPGPRQR*RGRFPSWSAML
Trigger: CAACATCGCTGACCAGGATGGGAAACGCCCCCTGCATCTCTGCCGGGGGCCTGGCACCCTTGAGTGTGCGGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS CCA 72 bp TCAGCAGCAGCCGCAGGACTTCCGTGTGGCCACGGCTaGCTGCCACATGCAGTGGGGTGGTCAGCTCCTCTT +
Preference number: 6 (lower is better)
Translates to: SAAAAGLPCGHG*LPHAVGWSAPL
Trigger: AAGAGGAGCTGACCACCCCACTGCATGTGGCAGCCAGCCGTGGCCACACGGAAGTCCTGCGGCTGCTGCTGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS CCA 72 bp GATGGACTGGCAGCGGACGTCACAGGCAGCCAGCAGTaGGGTCCAGCCTTCGGCATTGCGGGCATCAGGACA +
Preference number: 6 (lower is better)
Translates to: DGLAADVTGSQQ*GPAFGIAGIRT
Trigger: TGTCCTGATGCCCGCAATGCCGAAGGCTGGACCCCACTGCTGGCTGCCTGTGACGTCCGCTGCCAGTCCATC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS TCA 72 bp ACAGACAGAAGGCCCCTGTGTCCCACGCTCCGAGGCTaGCCTGGCCACGCATCCAGCAGGAGCTATTCTGGG +
Preference number: 6 (lower is better)
Translates to: TDRRPLCPTLRG*PGHASSRSYSG
Trigger: CCCAGAATAGCTCCTGCTGGATGCGTGGCCAGGTCAGCCTCGGAGCGTGGGACACAGGGGCCTTCTGTCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275838.5
CDS TCA 72 bp CTTGTCCTGGTCCGCAGCATCAGCGTCTGCTCCAGCTaGAAGCAGCAAGCTGCACAGCTGCAGGCAGCGGGC +
Preference number: 6 (lower is better)
Translates to: LVLVRSISVCSS*KQQAAQLQAAG
Trigger: GCCCGCTGCCTGCAGCTGTGCAGCTTGCTGCTTTCAGCTGGAGCAGACGCTGATGCTGCGGACCAGGACAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS TCA 72 bp GGGGCGTGTGTCCCCCATAGTCCATGGTGTTGGCGCTaGCACCACAGGACAGGAGCAGCTCCACGACAGCTG +
Preference number: 6 (lower is better)
Translates to: GACVPHSPWCWR*HHRTGAAPRQL
Trigger: CAGCTGTCGTGGAGCTGCTCCTGTCCTGTGGTGTCAGCGCCAACACCATGGACTATGGGGGACACACGCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS GCA 72 bp TCTGCCAGCTCCACATGGCCAAGCCGGGCGGCCACATaGAAAGGGGTCTCCTCTTCTTCCTCGGACCGACCA +
Preference number: 6 (lower is better)
Translates to: SASSTWPSRAAT*KGVSSSSSDRP
Trigger: TGGTCGGTCCGAGGAAGAAGAGGAGACCCCTTTGCATGTGGCCGCCCGGCTTGGCCATGTGGAGCTGGCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS CCA 72 bp AGCGGAGCGCACAGCGGCTCAAATGCTGCAGCGACCTaGGCTGCCTCACCAAGGCGAAGAGGGAGGAGTAGA +
Preference number: 6 (lower is better)
Translates to: SGAHSGSNAAAT*AASPRRRGRSR
Trigger: TCTACTCCTCCCTCTTCGCCTTGGTGAGGCAGCCCAGGTCGCTGCAGCATTTGAGCCGCTGTGCGCTCCGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS GCA 72 bp CGCAGGACTTCCGTGTGGCCACGGCTGGCTGCCACATaGAGTGGGGTGGTCAGCTCCTCTTCGTATGTCAGA +
Preference number: 6 (lower is better)
Translates to: RRTSVWPRLAAT*SGVVSSSSYVR
Trigger: TCTGACATACGAAGAGGAGCTGACCACCCCACTGCATGTGGCAGCCAGCCGTGGCCACACGGAAGTCCTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS CCA 72 bp CCGTGTGGCCACGGCTGGCTGCCACATGCAGTGGGGTaGTCAGCTCCTCTTCGTATGTCAGAGACCAGAGTC +
Preference number: 6 (lower is better)
Translates to: PCGHGWLPHAVG*SAPLRMSETRV
Trigger: GACTCTGGTCTCTGACATACGAAGAGGAGCTGACCACCCCACTGCATGTGGCAGCCAGCCGTGGCCACACGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS CCA 72 bp GATGCAGGGGGCGTTTCCCATCCTGGTCAGCGATGTTaGGGTCGGCTCCTGCCACCAGCAGCACATGAACAC +
Preference number: 6 (lower is better)
Translates to: DAGGVSHPGQRC*GRLLPPAAHEH
Trigger: GTGTTCATGTGCTGCTGGTGGCAGGAGCCGACCCCAACATCGCTGACCAGGATGGGAAACGCCCCCTGCATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS CCA 72 bp GACTTCCGTGTGGCCACGGCTGGCTGCCACATGCAGTaGGGTGGTCAGCTCCTCTTCGTATGTCAGAGACCA +
Preference number: 6 (lower is better)
Translates to: DFRVATAGCHMQ*GGQLLFVCQRP
Trigger: TGGTCTCTGACATACGAAGAGGAGCTGACCACCCCACTGCATGTGGCAGCCAGCCGTGGCCACACGGAAGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275838.5
ENST00000377867.7
ENST00000420175.3
CDS CCA 72 bp GCTGCACAACACTGTAGGTGTTCATCAGGACCTCGATaGTCCGAGGGCACGTGCTCCAGCGCTCCAGCACCT +
Preference number: 6 (lower is better)
Translates to: AAQHCRCSSGPR*SEGTCSSAPAP
Trigger: AGGTGCTGGAGCGCTGGAGCACGTGCCCTCGGACCATCGAGGTCCTGATGAACACCTACAGTGTTGTGCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377867.7
ENST00000420175.3
CDS CAA 72 bp CCAGTGGGGAGAGGAGTTCTTTCCCCAGGGCATGGCTaGTTCTGGGAGAGCCAAAGCAGCACGACTCCCAGC +
Preference number: 6 (lower is better)
Translates to: PVGRGVLSPGHG*FWESQSSTTPS
Trigger: GCTGGGAGTCGTGCTGCTTTGGCTCTCCCAGAACAAGCCATGCCCTGGGGAAAGAACTCCTCTCCCCACTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377867.7
ENST00000415615.1
CDS CCA 72 bp GGGAGAGGAGTTCTTTCCCCAGGGCATGGCTTGTTCTaGGAGAGCCAAAGCAGCACGACTCCCAGCGATGTT +
Preference number: 6 (lower is better)
Translates to: GRGVLSPGHGLF*ESQSSTTPSDV
Trigger: AACATCGCTGGGAGTCGTGCTGCTTTGGCTCTCCCAGAACAAGCCATGCCCTGGGGAAAGAACTCCTCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377867.7
ENST00000415615.1
CDS CAA 72 bp TCGTATGTCAGAGACCAGAGTCTCAGAGCACGGATGTaGAAGCGGAAATCCCTCCATCGCTCTGGGTCGCTG +
Preference number: 6 (lower is better)
Translates to: SYVRDQSLRARM*KRKSLHRSGSL
Trigger: CAGCGACCCAGAGCGATGGAGGGATTTCCGCTTCAACATCCGTGCTCTGAGACTCTGGTCTCTGACATACGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275838.5
ENST00000420175.3