RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ASAP3 (Homo sapiens)

Ensembl gene IDs: ENSG00000088280

Ensembl transcript IDs: ENST00000336689.8, ENST00000437606.6, ENST00000449467.2, ENST00000465372.5, ENST00000475814.5, ENST00000478858.5, ENST00000484418.1, ENST00000492982.6, ENST00000495646.5, ENST00000530874.1, ENST00000608765.1, ENST00000618240.4, ENST00000634459.1, ENST00000634513.1, ENST00000634548.1, ENST00000634561.2, ENST00000634705.1, ENST00000634883.1, ENST00000635167.1, ENST00000635198.1, ENST00000635351.1, ENST00000635442.1, ENST00000635461.1, ENST00000635693.1

Found 1571 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCCAGCAACAACTCGGAGGGGCCCAGCAGGTCCAAGGTGAGTGACTaGATGCGCGAAAAGCGCACGCCCAGTTCGCGGTGGACGCCCGAG +
Preference number: 1 (lower is better)
Translates to: ASNNSEGPSRSKVSD*MREKRTPSSRWTPE
Trigger: CTCGGGCGTCCACCGCGAACTGGGCGTGCGCTTTTCGCGCATGCAGTCACTCACCTTGGACCTGCTGGGCCCCTCCGAGTTGTTGCTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR TCA 90 bp GGGTGGCTGCTCCCAGGCTGGCGACAGTCTCATAGGTCTTGTTGCTaGTGTCCAGCCTCCCACTGGCCCAGTGAGCCTGGGCCGGGAGCT +
Preference number: 1 (lower is better)
Translates to: GWLLPGWRQSHRSCC*CPASHWPSEPGPGA
Trigger: AGCTCCCGGCCCAGGCTCACTGGGCCAGTGGGAGGCTGGACATCAGCAACAAGACCTATGAGACTGTCGCCAGCCTGGGAGCAGCCACCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR CCA 90 bp GGAGGTACATCTCCGAAGGGGTGGTCCCGGATGTCAGGCTGGGTCTaGAGGTGCCTGGGGGCTCTCGGAGGCCCTCTTCAGAGTTGGGTG +
Preference number: 1 (lower is better)
Translates to: GGTSPKGWSRMSGWV*RCLGALGGPLQSWV
Trigger: CACCCAACTCTGAAGAGGGCCTCCGAGAGCCCCCAGGCACCTCCAGACCCAGCCTGACATCCGGGACCACCCCTTCGGAGATGTACCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR GCA 90 bp CCAGCCAGGCAGCTGTGTTGGCCATTGGTGCTCTCTAGTCTCCCCTaGTTGGCTTGGCCCATTCCTGCCAGGGCCCAGCACCCAGCAACT +
Preference number: 1 (lower is better)
Translates to: PARQLCWPLVLSSLP*LAWPIPARAQHPAT
Trigger: AGTTGCTGGGTGCTGGGCCCTGGCAGGAATGGGCCAAGCCAAGCAGGGGAGACTAGAGAGCACCAATGGCCAACACAGCTGCCTGGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR GCA 90 bp TGGCAAGGGCGGGGGACAGTCCTCACTCTCGCCCTGAGGGGTGGCTaGTCCCAGGCTGGCGACAGTCTCATAGGTCTTGTTGCTGATGTC +
Preference number: 1 (lower is better)
Translates to: WQGRGTVLTLALRGG*SQAGDSLIGLVADV
Trigger: GACATCAGCAACAAGACCTATGAGACTGTCGCCAGCCTGGGAGCAGCCACCCCTCAGGGCGAGAGTGAGGACTGTCCCCCGCCCTTGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR GCA 90 bp CCTGCCCATTGGCAAAGGCCTCCAGTACCGACAGGAGGTCCCTGTTaGAAATGGCTGTCCAGAGTCGCTGAGGCTCAGGTGTGCACCGGC +
Preference number: 1 (lower is better)
Translates to: PAHWQRPPVPTGGPC*KWLSRVAEAQVCTG
Trigger: GCCGGTGCACACCTGAGCCTCAGCGACTCTGGACAGCCATTTGCAACAGGGACCTCCTGTCGGTACTGGAGGCCTTTGCCAATGGGCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR GCA 90 bp TCAGGTGCCTGTGCATCAGGCCCTGGCAGCGGCTGTCCAAAGTCCTaGCCATTGGCAAAGGCCTCCAGTACCGACAGGAGGTCCCTGTTG +
Preference number: 1 (lower is better)
Translates to: SGACASGPGSGCPKS*PLAKASSTDRRSLL
Trigger: CAACAGGGACCTCCTGTCGGTACTGGAGGCCTTTGCCAATGGGCAGGACTTTGGACAGCCGCTGCCAGGGCCTGATGCACAGGCACCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR GCA 90 bp TCTCCCCTTCAGCAGCAGCTTGAGGCAGTCGGGCTGGTTGTAGAGTaGTGCGTAGTGCAGAGCCGTGTTCCCGTCAGCAGCCTTGGCATC +
Preference number: 1 (lower is better)
Translates to: SPLQQQLEAVGLVVE*CVVQSRVPVSSLGI
Trigger: GATGCCAAGGCTGCTGACGGGAACACGGCTCTGCACTACGCAGCACTCTACAACCAGCCCGACTGCCTCAAGCTGCTGCTGAAGGGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
3UTR CCA 90 bp CAGCTGTGTTGGCCATTGGTGCTCTCTAGTCTCCCCTGCTTGGCTTaGCCCATTCCTGCCAGGGCCCAGCACCCAGCAACTGGCAAGTTG +
Preference number: 1 (lower is better)
Translates to: QLCWPLVLSSLPCLA*PIPARAQHPATGKL
Trigger: CAACTTGCCAGTTGCTGGGTGCTGGGCCCTGGCAGGAATGGGCCAAGCCAAGCAGGGGAGACTAGAGAGCACCAATGGCCAACACAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR CCA 90 bp CCTGTGCATCAGGCCCTGGCAGCGGCTGTCCAAAGTCCTGCCCATTaGCAAAGGCCTCCAGTACCGACAGGAGGTCCCTGTTGCAAATGG +
Preference number: 1 (lower is better)
Translates to: PVHQALAAAVQSPAH*QRPPVPTGGPCCKW
Trigger: CCATTTGCAACAGGGACCTCCTGTCGGTACTGGAGGCCTTTGCCAATGGGCAGGACTTTGGACAGCCGCTGCCAGGGCCTGATGCACAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR TCA 90 bp CCTGGGCCTGATGGAGTGCATGTACTGAGGCCGCCAGCTTCTCGATaGAGGGGAACAGGCTCTGGGCAGCCTTCCAGCCATCTTGGAAAA +
Preference number: 1 (lower is better)
Translates to: PGPDGVHVLRPPASR*RGTGSGQPSSHLGK
Trigger: TTTTCCAAGATGGCTGGAAGGCTGCCCAGAGCCTGTTCCCCTTCATCGAGAAGCTGGCGGCCTCAGTACATGCACTCCATCAGGCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR TCA 90 bp TGGCATGTCTTGCACACCCTTGGACCAAAGTCCGAGAAGAGTTTTTaGCTGGCAAGGGCGGGGGACAGTCCTCACTCTCGCCCTGAGGGG +
Preference number: 1 (lower is better)
Translates to: WHVLHTLGPKSEKSF*LARAGDSPHSRPEG
Trigger: CCCCTCAGGGCGAGAGTGAGGACTGTCCCCCGCCCTTGCCAGTCAAAAACTCTTCTCGGACTTTGGTCCAAGGGTGTGCAAGACATGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR GCA 90 bp CTTGGCAGGGTCCCTGATCTGGAAGTCAGTGATGGAGGGCTCTCCTaGCCTTGTGAAGCCCCCAGACTGACGGGGGAAATAGAGTCTCGA +
Preference number: 1 (lower is better)
Translates to: LGRVPDLEVSDGGLS*PCEAPRLTGEIESR
Trigger: TCGAGACTCTATTTCCCCCGTCAGTCTGGGGGCTTCACAAGGGCAGGAGAGCCCTCCATCACTGACTTCCAGATCAGGGACCCTGCCAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR GCA 90 bp TCCACCAGAGGCAGGGAAGCCTGGTTGGCGACTTTGACAGCCAAATaGAAGACGAGTTCTTCAGGTGCCTGTGCATCAGGCCCTGGCAGC +
Preference number: 1 (lower is better)
Translates to: STRGREAWLATLTAK*KTSSSGACASGPGS
Trigger: GCTGCCAGGGCCTGATGCACAGGCACCTGAAGAACTCGTCTTGCATTTGGCTGTCAAAGTCGCCAACCAGGCTTCCCTGCCTCTGGTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR CCA 90 bp TCGCGGGTGAACACGGCCAAGTTTAGGAAGCCTGTGGACAGCTCATaGCTGTTCTGGGACAGGTGGCTGTTGCCTAAGGATTCCACGGCC +
Preference number: 1 (lower is better)
Translates to: SRVNTAKFRKPVDSS*LFWDRWLLPKDSTA
Trigger: GGCCGTGGAATCCTTAGGCAACAGCCACCTGTCCCAGAACAGCCATGAGCTGTCCACAGGCTTCCTAAACTTGGCCGTGTTCACCCGCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR CCA 90 bp GCATGTACTGAGGCCGCCAGCTTCTCGATGAAGGGGAACAGGCTCTaGGCAGCCTTCCAGCCATCTTGGAAAAAGTTGTGCTGGGCGTGG +
Preference number: 1 (lower is better)
Translates to: ACTEAASFSMKGNRL*AAFQPSWKKLCWAW
Trigger: CCACGCCCAGCACAACTTTTTCCAAGATGGCTGGAAGGCTGCCCAGAGCCTGTTCCCCTTCATCGAGAAGCTGGCGGCCTCAGTACATGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR TCA 90 bp TGCAACACTGACACCCACGCCTCACACTCGTGCTCGTCCTCTGCCTaGAAGTGGTACGTCCGGTTGTGGGTCACCAGGTCGAAGCACTTT +
Preference number: 1 (lower is better)
Translates to: CNTDTHASHSCSSSA*KWYVRLWVTRSKHF
Trigger: AAAGTGCTTCGACCTGGTGACCCACAACCGGACGTACCACTTTCAGGCAGAGGACGAGCACGAGTGTGAGGCGTGGGTGTCAGTGTTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
3UTR GCA 90 bp TGGGACAGGTGGCTGTTGCCTAAGGATTCCACGGCCTCTCGGTACTaGTCTTCATTCTCCACATGGCCAAGGCCGGAGCTATGGATTGCC +
Preference number: 1 (lower is better)
Translates to: WDRWLLPKDSTASRY*SSFSTWPRPELWIA
Trigger: GGCAATCCATAGCTCCGGCCTTGGCCATGTGGAGAATGAAGAGCAGTACCGAGAGGCCGTGGAATCCTTAGGCAACAGCCACCTGTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR TCA 90 bp CTTCATTTACTGTGCCAACCAAAGCTCTCCCCTTCAGCAGCAGCTTaGGGCAGTCGGGCTGGTTGTAGAGTGCTGCGTAGTGCAGAGCCG +
Preference number: 1 (lower is better)
Translates to: LHLLCQPKLSPSAAA*GSRAGCRVLRSAEP
Trigger: CGGCTCTGCACTACGCAGCACTCTACAACCAGCCCGACTGCCTCAAGCTGCTGCTGAAGGGGAGAGCTTTGGTTGGCACAGTAAATGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
3UTR GCA 90 bp GGAAGCCTGTGGACAGCTCATGGCTGTTCTGGGACAGGTGGCTGTTaGCTAAGGATTCCACGGCCTCTCGGTACTGCTCTTCATTCTCCA +
Preference number: 1 (lower is better)
Translates to: GSLWTAHGCSGTGGC*LRIPRPLGTALHSP
Trigger: TGGAGAATGAAGAGCAGTACCGAGAGGCCGTGGAATCCTTAGGCAACAGCCACCTGTCCCAGAACAGCCATGAGCTGTCCACAGGCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR GCA 90 bp GCAAATGGCTGTCCAGAGTCGCTGAGGCTCAGGTGTGCACCGGCGTaGAAACCTATGCTCCACATACTTGGCCATAATGTAGTCCCTGCG +
Preference number: 1 (lower is better)
Translates to: ANGCPESLRLRCAPA*KPMLHILGHNVVPA
Trigger: CGCAGGGACTACATTATGGCCAAGTATGTGGAGCATAGGTTTGCACGCCGGTGCACACCTGAGCCTCAGCGACTCTGGACAGCCATTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR CCA 90 bp AACACGGCCAAGTTTAGGAAGCCTGTGGACAGCTCATGGCTGTTCTaGGACAGGTGGCTGTTGCCTAAGGATTCCACGGCCTCTCGGTAC +
Preference number: 1 (lower is better)
Translates to: NTAKFRKPVDSSWLF*DRWLLPKDSTASRY
Trigger: GTACCGAGAGGCCGTGGAATCCTTAGGCAACAGCCACCTGTCCCAGAACAGCCATGAGCTGTCCACAGGCTTCCTAAACTTGGCCGTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR CCA 90 bp GGGCCTGCTCCAGCAGCTCCTCACACTCCTTGTGGTGCTTCTTCCTaGCTATGTCCAGAGCTGTCTCGCCTGCTTCATTTACTGTGCCAA +
Preference number: 1 (lower is better)
Translates to: GPAPAAPHTPCGASS*LCPELSRLLHLLCQ
Trigger: TTGGCACAGTAAATGAAGCAGGCGAGACAGCTCTGGACATAGCCAGGAAGAAGCACCACAAGGAGTGTGAGGAGCTGCTGGAGCAGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
3UTR CCA 90 bp ATGTCACTCTCAGCTGAGGGTTTAGGGCCGCCGTGTGAGGGTAGCTaGGCCTCCATGACCTCATTGAAGCTCGTGTTTCCCATGTTCAAG +
Preference number: 1 (lower is better)
Translates to: MSLSAEGLGPPCEGS*ASMTSLKLVFPMFK
Trigger: CTTGAACATGGGAAACACGAGCTTCAATGAGGTCATGGAGGCCCAGCTACCCTCACACGGCGGCCCTAAACCCTCAGCTGAGAGTGACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR TCA 90 bp GTCTTGCAAAAGTTGCACAGAACTTGCTGGGAGACTCCCAGTCCTTaGGCCATCTCCTTCAGTGATGCCAACCGGCACGTTCCTTCTGGG +
Preference number: 1 (lower is better)
Translates to: VLQKLHRTCWETPSP*AISFSDANRHVPSG
Trigger: CCCAGAAGGAACGTGCCGGTTGGCATCACTGAAGGAGATGGCTCAAGGACTGGGAGTCTCCCAGCAAGTTCTGTGCAACTTTTGCAAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000492982.6
ENST00000618240.4
ENST00000634705.1
ENST00000635693.1
3UTR GCA 90 bp CCAAGCCCAACCCTTAAGACCAGCTTTCCACCAAAGGACCACCCCTaGAGGGCCCTTGTCTTACTCGTGTGGTATCTGAAGTGCCTAACA +
Preference number: 1 (lower is better)
Translates to: PSPTLKTSFPPKDHP*RALVLLVWYLKCLT
Trigger: TGTTAGGCACTTCAGATACCACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGCTGGTCTTAAGGGTTGGGCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR GCA 90 bp CCACTTTCTCCGTCCCAAACTGCTTGTTGCCTTGGTGCTGGTGGATaGTATAGCCACATCCTGAGTTCTTCCGGCTCAGGTGTTCCTCTC +
Preference number: 1 (lower is better)
Translates to: PLSPSQTACCLGAGG*YSHILSSSGSGVPL
Trigger: GAGAGGAACACCTGAGCCGGAAGAACTCAGGATGTGGCTATAGCATCCACCAGCACCAAGGCAACAAGCAGTTTGGGACGGAGAAAGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR CCA 90 bp AAGTTTAGGAAGCCTGTGGACAGCTCATGGCTGTTCTGGGACAGGTaGCTGTTGCCTAAGGATTCCACGGCCTCTCGGTACTGCTCTTCA +
Preference number: 1 (lower is better)
Translates to: KFRKPVDSSWLFWDR*LLPKDSTASRYCSS
Trigger: TGAAGAGCAGTACCGAGAGGCCGTGGAATCCTTAGGCAACAGCCACCTGTCCCAGAACAGCCATGAGCTGTCCACAGGCTTCCTAAACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR CCA 90 bp CTGGAGACTTCAGAACGATCTCCACTGGCATGTCTTGCACACCCTTaGACCAAAGTCCGAGAAGAGTTTTTGACTGGCAAGGGCGGGGGA +
Preference number: 1 (lower is better)
Translates to: LETSERSPLACLAHP*TKVREEFLTGKGGG
Trigger: TCCCCCGCCCTTGCCAGTCAAAAACTCTTCTCGGACTTTGGTCCAAGGGTGTGCAAGACATGCCAGTGGAGATCGTTCTGAAGTCTCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR TCA 90 bp AAACTGCTTGTTGCCTTGGTGCTGGTGGATGCTATAGCCACATCCTaGGTTCTTCCGGCTCAGGTGTTCCTCTCTGCTCTCAAGCTGCAG +
Preference number: 1 (lower is better)
Translates to: KLLVALVLVDAIATS*VLPAQVFLSALKLQ
Trigger: CTGCAGCTTGAGAGCAGAGAGGAACACCTGAGCCGGAAGAACTCAGGATGTGGCTATAGCATCCACCAGCACCAAGGCAACAAGCAGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR CCA 90 bp AGCGCTTCTCTTCCTCATCCTCCTCACTGTCAGAGCCAGGCTCTGTaGAAATTACCCAGGAGTAGTCCACATGTAGAGGGAAGGCAAAGG +
Preference number: 1 (lower is better)
Translates to: SASLPHPPHCQSQAL*KLPRSSPHVEGRQR
Trigger: CCTTTGCCTTCCCTCTACATGTGGACTACTCCTGGGTAATTTCCACAGAGCCTGGCTCTGACAGTGAGGAGGATGAGGAAGAGAAGCGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484418.1
ENST00000635167.1
3UTR TCA 90 bp TCTTGGAAAAAGTTGTGCTGGGCGTGGAAGAACTTGATGAGGCTCTaGAGGAAGTCAGGACCTTGCTTCATCTGGCTCTCCCCGGCTTTG +
Preference number: 1 (lower is better)
Translates to: SWKKLCWAWKNLMRL*RKSGPCFIWLSPAL
Trigger: CAAAGCCGGGGAGAGCCAGATGAAGCAAGGTCCTGACTTCCTTCAGAGCCTCATCAAGTTCTTCCACGCCCAGCACAACTTTTTCCAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR TCA 90 bp CATATAGGTATAAACCAGCTGAGTCCAGAGCCATGCCCTGGAATCTaGCCCTGCCTATTCCCAAGCCCAACCCTTAAGACCAGCTTTCCA +
Preference number: 1 (lower is better)
Translates to: HIGINQLSPEPCPGI*PCLFPSPTLKTSFP
Trigger: TGGAAAGCTGGTCTTAAGGGTTGGGCTTGGGAATAGGCAGGGTCAGATTCCAGGGCATGGCTCTGGACTCAGCTGGTTTATACCTATATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR GCA 90 bp GTGGGTGCATCTGACTCTACAATTTGGCTGGGGAATATAGGAGAATaGCTAGGGAAGGCTGTGCTGTCCCTCAAAAGGAGTGACATTCAG +
Preference number: 1 (lower is better)
Translates to: VGASDSTIWLGNIGE*LGKAVLSLKRSDIQ
Trigger: CTGAATGTCACTCCTTTTGAGGGACAGCACAGCCTTCCCTAGGCATTCTCCTATATTCCCCAGCCAAATTGTAGAGTCAGATGCACCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR GCA 90 bp TTTTCTTGTATAGAAAGCCCACTTTCTCCGTCCCAAACTGCTTGTTaGCTTGGTGCTGGTGGATGCTATAGCCACATCCTGAGTTCTTCC +
Preference number: 1 (lower is better)
Translates to: FSCIESPLSPSQTAC*LGAGGCYSHILSSS
Trigger: GGAAGAACTCAGGATGTGGCTATAGCATCCACCAGCACCAAGGCAACAAGCAGTTTGGGACGGAGAAAGTGGGCTTTCTATACAAGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR CCA 90 bp CACCTCCGCGATGAGCAGCTTTGTGAGGTCGTGCGGCTCCCCATCATGGCCGGCTGCGGCTCCCCATCATaGCCGGCGGACCCCCAGGAC +
Preference number: 2 (lower is better)
Translates to: HLRDEQLCEVVRLPIMAGCGSPS*PADPQD
Trigger: GTCCTGGGGGTCCGCCGGCCATGATGGGGAGCCGCA...GCCGGCCATGATGGGGAGCCGCACGACCTCACAAAGCTGCTCATCGCGGAGGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
3UTR-3UTR CCA 90 bp GGTCTGCAGCCCCGCAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCACCTTGCGGCTCCCCATCATaGCCGGCGGACCCCCAGGAC +
Preference number: 2 (lower is better)
Translates to: GLQPRSRSTGYSQACSSPCGSPS*PADPQD
Trigger: GTCCTGGGGGTCCGCCGGCCATGATGGGGAGCCGCA...AGGTGAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGGGGCTGCAGACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
3UTR-3UTR GCA 90 bp GCGCACGCCCAGTTCGCGGTGGACGCCCGAGCACTGGATGCAGGTGAGCACGCCGGGACAGGTGGCTGTTaGCTAAGGATTCCACGGCCT +
Preference number: 2 (lower is better)
Translates to: AHAQFAVDARALDAGEHAGTGGC*LRIPRP
Trigger: AGGCCGTGGAATCCTTAGGCAACAGCCACCTGTCCC...GGCGTGCTCACCTGCATCCAGTGCTCGGGCGTCCACCGCGAACTGGGCGTGCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR CCA 90 bp CACCTCCGCGATGAGCAGCTTTGTGAGGTCGTGCGGCTCCCCATCATGGCCGGCTGGACGCCCGAGCACTaGATGCAGGTGAGCACGCCC +
Preference number: 2 (lower is better)
Translates to: HLRDEQLCEVVRLPIMAGWTPEH*MQVSTP
Trigger: GGGCGTGCTCACCTGCATCCAGTGCTCGGGCGTCCA...GCCGGCCATGATGGGGAGCCGCACGACCTCACAAAGCTGCTCATCGCGGAGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
3UTR CAA 90 bp CCAGCGCTGGGCTCCCCGAGGAAGGCGCTGCTCAGGGCTTCGTCCTaGCTGTTCTGCAACACTGACACCCACGCCTCACACTCGTGCTCG +
Preference number: 2 (lower is better)
Translates to: PALGSPRKALLRASS*LFCNTDTHASHSCS
Trigger: CGAGCACGAGTGTGAGGCGTGGGTGTCAGTGTTGCAGAACAGCAAGGACGAAGCCCTGAGCAGCGCCTTCCTCGGGGAGCCCAGCGCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
3UTR-3UTR GCA 90 bp GTGGGGTCTGCAGCCCCGCAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCATGCGCCGCTCTCTCTaGATGTCCTGGGCCACCTCC +
Preference number: 2 (lower is better)
Translates to: VGSAAPQSQHWLFPGLLFMRRSL*MSWATS
Trigger: GGAGGTGGCCCAGGACATGCAGAGAGAGCGGCGCAT...GAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGGGGCTGCAGACCCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR CCA 90 bp TCTTTCCTTCTGCCATCCAGAGGCCTGAGGGACAGGGCTGGGACCCACCTTCTCTGCGGCTCCCCATCATaGCCGGCGGACCCCCAGGAC +
Preference number: 2 (lower is better)
Translates to: SFLLPSRGLRDRAGTHLLCGSPS*PADPQD
Trigger: GTCCTGGGGGTCCGCCGGCCATGATGGGGAGCCGCA...GAGAAGGTGGGTCCCAGCCCTGTCCCTCAGGCCTCTGGATGGCAGAAGGAAAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR CCA 90 bp CGTGGGGTCTGCAGCCCCGCAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCCGCAGTCGCAGCACTaGCTATTCCCAGGCCTGCTC +
Preference number: 2 (lower is better)
Translates to: RGVCSPAVAALAIPRPALPQSQH*LFPGLL
Trigger: GAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGG...AAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGGGGCTGCAGACCCCACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
3UTR CAA 90 bp GCCAGGCAGCTGTGTTGGCCATTGGTGCTCTCTAGTCTCCCCTGCTaGGCTTGGCCCATTCCTGCCAGGGCCCAGCACCCAGCAACTGGC +
Preference number: 2 (lower is better)
Translates to: ARQLCWPLVLSSLPC*AWPIPARAQHPATG
Trigger: GCCAGTTGCTGGGTGCTGGGCCCTGGCAGGAATGGGCCAAGCCAAGCAGGGGAGACTAGAGAGCACCAATGGCCAACACAGCTGCCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR TCA 90 bp GCGATGAGCAGCTTTGTGAGGTCGTGCGGCTCCCCATCATGGCCGGCGGACCCCTGCTCGTCCTCTGCCTaGAAGTGGTACGTCCGGTTG +
Preference number: 2 (lower is better)
Translates to: AMSSFVRSCGSPSWPADPCSSSA*KWYVRL
Trigger: CAACCGGACGTACCACTTTCAGGCAGAGGACGAGCA...GGGGTCCGCCGGCCATGATGGGGAGCCGCACGACCTCACAAAGCTGCTCATCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
3UTR-3UTR GCA 90 bp CCAGCGCTGGGCTCCCCGAGGAAGGCGCTGCTCAGGGCTTCGTCCTTGCTGTTCCTCGTGCTCGTCCTCTaGCTGAAAGTGGTACGTCCG +
Preference number: 2 (lower is better)
Translates to: PALGSPRKALLRASSLLFLVLVL*LKVVRP
Trigger: CGGACGTACCACTTTCAGGCAGAGGACGAGCACGAG...GAACAGCAAGGACGAAGCCCTGAGCAGCGCCTTCCTCGGGGAGCCCAGCGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
3UTR-3UTR GCA 90 bp TTCCCAGGCCTGCTCTTCACCTCCGCGATGAGCAGCTTTGTGAGGTCGTGCGGCCCCCGAGGAAGGCGCTaGTCAGGGCTTCGTCCTTGC +
Preference number: 2 (lower is better)
Translates to: FPGLLFTSAMSSFVRSCGPRGRR*SGLRPC
Trigger: GCAAGGACGAAGCCCTGAGCAGCGCCTTCCTCGGGG...GCCGCACGACCTCACAAAGCTGCTCATCGCGGAGGTGAAGAGCAGGCCTGGGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
3UTR-3UTR CCA 90 bp GCGCACGCCCAGTTCGCGGTGGACGCCCGAGCACTGGATGCAGGTGAGCACGCCTTTCTCCTCAGGGTTTaGCCTCACTTGGCACGTCAG +
Preference number: 2 (lower is better)
Translates to: AHAQFAVDARALDAGEHAFLLRV*PHLARQ
Trigger: CTGACGTGCCAAGTGAGGCCAAACCCTGAGGAGAAA...GGCGTGCTCACCTGCATCCAGTGCTCGGGCGTCCACCGCGAACTGGGCGTGCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
3UTR-3UTR TCA 90 bp GTGGGGTCTGCAGCCCCGCAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCCAGGTCCAAGGTGAGTaGCTGCATGCGCGAAAAGCG +
Preference number: 2 (lower is better)
Translates to: VGSAAPQSQHWLFPGLLFQVQGE*LHARKA
Trigger: CGCTTTTCGCGCATGCAGTCACTCACCTTGGACCTG...GAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGGGGCTGCAGACCCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
3UTR-3UTR TCA 90 bp CGTGGGGTCTGCAGCCCCGCAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTTCGTCCTCCTGGGCCTaGTGGAGTGCATGTACTGAG +
Preference number: 2 (lower is better)
Translates to: RGVCSPAVAALAIPRPALSSSWA*WSACTE
Trigger: CTCAGTACATGCACTCCATCAGGCCCAGGAGGACGA...AAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGGGGCTGCAGACCCCACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR GCA 90 bp GTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCACCTCCGCGATGAGCAGCTTCCCCGAGGAAGGCGCTaGTCAGGGCTTCGTCCTTGC +
Preference number: 2 (lower is better)
Translates to: VAALAIPRPALHLRDEQLPRGRR*SGLRPC
Trigger: GCAAGGACGAAGCCCTGAGCAGCGCCTTCCTCGGGG...AAGCTGCTCATCGCGGAGGTGAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
3UTR-3UTR GCA 90 bp CCCGCAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCACCTCCGCGATGAGAGCTTTGTGAGGTCGTaGGGCTCCCCATCATGGCCG +
Preference number: 2 (lower is better)
Translates to: PAVAALAIPRPALHLRDESFVRS*GSPSWP
Trigger: CGGCCATGATGGGGAGCCGCACGACCTCACAAAGCT...CTCATCGCGGAGGTGAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
3UTR-3UTR GCA 90 bp TGGGGTCTGCAGCCCCGCAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCAAGCTTTGTGAGGTCGTaGGGCTCCCCATCATGGCCG +
Preference number: 2 (lower is better)
Translates to: WGLQPRSRSTGYSQACSSSFVRS*GSPSWP
Trigger: CGGCCATGATGGGGAGCCGCACGACCTCACAAAGCT...TGAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGGGGCTGCAGACCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
3UTR-3UTR CCA 90 bp CCTCCCACTGGCCCAGTGAGCCTGGGCCGGGAGCTTCAGCAAGCAGCGCTTCTCGAGGGGAGTAACAGCTaGTCCTGGAGAAGAACTGGG +
Preference number: 2 (lower is better)
Translates to: PPTGPVSLGRELQQAALLEGSNS*SWRRTG
Trigger: CCCAGTTCTTCTCCAGGACCAGCTGTTACTCCCCTC...GAGAAGCGCTGCTTGCTGAAGCTCCCGGCCCAGGCTCACTGGGCCAGTGGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484418.1
ENST00000635167.1
3UTR-3UTR TCA 90 bp CAGTCCCTACTTGGCAGGGTCCCTGATCTGGAAGTCAGTGATGGAGGGCTCTCCGCTCTCCTGCCCTTGTaGAGCCCCCAGACTGACGGG +
Preference number: 2 (lower is better)
Translates to: QSLLGRVPDLEVSDGGLSALLPL*SPQTDG
Trigger: CCCGTCAGTCTGGGGGCTTCACAAGGGCAGGAGAGC...GGAGAGCCCTCCATCACTGACTTCCAGATCAGGGACCCTGCCAAGTAGGGACTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR TCA 90 bp GGCCTGCTCTTCACCTCCGCGATGAGCAGCTTTGTGAGGTCGTGCGGCTCCCCAGCTGTTCTGCAACACTaGCACCCACGCCTCACACTC +
Preference number: 2 (lower is better)
Translates to: GLLFTSAMSSFVRSCGSPAVLQH*HPRLTL
Trigger: GAGTGTGAGGCGTGGGTGTCAGTGTTGCAGAACAGC...TGGGGAGCCGCACGACCTCACAAAGCTGCTCATCGCGGAGGTGAAGAGCAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
3UTR-3UTR GCA 90 bp ACAACCCTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCGGCTTGGCCCATTCCTaGCAGGGCCCAGCACCCAGC +
Preference number: 2 (lower is better)
Translates to: TTLFLWEPQTSQVSRGNSGLAHS*QGPAPS
Trigger: GCTGGGTGCTGGGCCCTGGCAGGAATGGGCCAAGCC...GCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAGGGTTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR GCA 90 bp AGGCCTGCTCTTCACCTCCGCGATGAGCAGCTTTGTGAGGTCGTGCGGCTCCCCCTCGTGCTCGTCCTCTaGCTGAAAGTGGTACGTCCG +
Preference number: 2 (lower is better)
Translates to: RPALHLRDEQLCEVVRLPLVLVL*LKVVRP
Trigger: CGGACGTACCACTTTCAGGCAGAGGACGAGCACGAG...GGGGAGCCGCACGACCTCACAAAGCTGCTCATCGCGGAGGTGAAGAGCAGGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
3UTR-3UTR GCA 90 bp TGCAGCCCCGCAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCACCTCCGCTCGTCCTTGCTGTTCTaGAACACTGACACCCACGCC +
Preference number: 2 (lower is better)
Translates to: CSPAVAALAIPRPALHLRSSLLF*NTDTHA
Trigger: GGCGTGGGTGTCAGTGTTGCAGAACAGCAAGGACGA...GCGGAGGTGAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGGGGCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
3UTR-3UTR GCA 90 bp GTCGACCGTCCCTCAGCTGCCCCTTCATCAGACTGTCCAGGGGGAAAGAGACAACCCCGAGGAAGGCGCTaGTCAGGGCTTCGTCCTTGC +
Preference number: 2 (lower is better)
Translates to: VDRPSAAPSSDCPGGKRQPRGRR*SGLRPC
Trigger: GCAAGGACGAAGCCCTGAGCAGCGCCTTCCTCGGGG...TTGTCTCTTTCCCCCTGGACAGTCTGATGAAGGGGCAGCTGAGGGACGGTCGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR CCA 90 bp GGTCTGCAGCCCCGCAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCACCTTGGTACGTCCGGTTGTaGGTCACCAGGTCGAAGCAC +
Preference number: 2 (lower is better)
Translates to: GLQPRSRSTGYSQACSSPWYVRL*VTRSKH
Trigger: GTGCTTCGACCTGGTGACCCACAACCGGACGTACCA...AGGTGAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGGGGCTGCAGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
3UTR-3UTR CCA 90 bp GGCCTGCTCTTCACCTCCGCGATGAGCAGCTTTGTGAGGTCGTGCGGCTCCCCATGGTACGTCCGGTTGTaGGTCACCAGGTCGAAGCAC +
Preference number: 2 (lower is better)
Translates to: GLLFTSAMSSFVRSCGSPWYVRL*VTRSKH
Trigger: GTGCTTCGACCTGGTGACCCACAACCGGACGTACCA...TGGGGAGCCGCACGACCTCACAAAGCTGCTCATCGCGGAGGTGAAGAGCAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
3UTR CAA 90 bp GCCTGTGCATCAGGCCCTGGCAGCGGCTGTCCAAAGTCCTGCCCATaGGCAAAGGCCTCCAGTACCGACAGGAGGTCCCTGTTGCAAATG +
Preference number: 2 (lower is better)
Translates to: ACASGPGSGCPKSCP*AKASSTDRRSLLQM
Trigger: CATTTGCAACAGGGACCTCCTGTCGGTACTGGAGGCCTTTGCCAATGGGCAGGACTTTGGACAGCCGCTGCCAGGGCCTGATGCACAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR TCA 90 bp GGCCTGCTCTTCACCTCCGCGATGAGCAGCTTTGTGAGGTCGTGCGGCTCCCCACTCAAGTCCCAGCTCTaGACATTGGGGCCTAGCATG +
Preference number: 2 (lower is better)
Translates to: GLLFTSAMSSFVRSCGSPLKSQL*TLGPSM
Trigger: CATGCTAGGCCCCAATGTTCAGAGCTGGGACTTGAG...TGGGGAGCCGCACGACCTCACAAAGCTGCTCATCGCGGAGGTGAAGAGCAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR TCA 90 bp CAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCACCTCCGCGATGAGCAGCTGCTCGTCCTCTGCCTaGAAGTGGTACGTCCGGTTG +
Preference number: 2 (lower is better)
Translates to: QSQHWLFPGLLFTSAMSSCSSSA*KWYVRL
Trigger: CAACCGGACGTACCACTTTCAGGCAGAGGACGAGCA...GCTGCTCATCGCGGAGGTGAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
3UTR-3UTR TCA 90 bp AGCAGGTCCAAGGTGAGTGACTGCATGCGCGAAAAGCGCACGCCCAGTTCGCGGGCTGTTCTGCAACACTaGCACCCACGCCTCACACTC +
Preference number: 2 (lower is better)
Translates to: SRSKVSDCMREKRTPSSRAVLQH*HPRLTL
Trigger: GAGTGTGAGGCGTGGGTGTCAGTGTTGCAGAACAGC...CCGCGAACTGGGCGTGCGCTTTTCGCGCATGCAGTCACTCACCTTGGACCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
3UTR-3UTR TCA 90 bp CGTGGGGTCTGCAGCCCCGCAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTTCTGAATCAGGTTCTTaGAGAGCGCAGCAACCTCGC +
Preference number: 2 (lower is better)
Translates to: RGVCSPAVAALAIPRPALSESGS*RAQQPR
Trigger: GCGAGGTTGCTGCGCTCTTCAAGAACCTGATTCAGA...AAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGGGGCTGCAGACCCCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR TCA 90 bp TCTTTCCTTCTGCCATCCAGAGGCCTGAGGGACAGGGCTGGGACCCACCTTCTCCATGTCACTCTCAGCTaGGGGTTTAGGGCCGCCGTG +
Preference number: 2 (lower is better)
Translates to: SFLLPSRGLRDRAGTHLLHVTLS*GFRAAV
Trigger: CACGGCGGCCCTAAACCCTCAGCTGAGAGTGACATG...GAGAAGGTGGGTCCCAGCCCTGTCCCTCAGGCCTCTGGATGGCAGAAGGAAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR CCA 90 bp GGTCTGCAGCCCCGCAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCACCTTCCTTGGTAGAGGCATaGCCTGTGGCAGGAAGAAGG +
Preference number: 2 (lower is better)
Translates to: GLQPRSRSTGYSQACSSPSLVEA*PVAGRR
Trigger: CCTTCTTCCTGCCACAGGCCATGCCTCTACCAAGGA...AGGTGAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGGGGCTGCAGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR CCA 90 bp AGGCCTGCTCTTCACCTCCGCGATGAGCAGCTTTGTGAGGTCGTGCGGCTCCCCTCCTTGGTAGAGGCATaGCCTGTGGCAGGAAGAAGG +
Preference number: 2 (lower is better)
Translates to: RPALHLRDEQLCEVVRLPSLVEA*PVAGRR
Trigger: CCTTCTTCCTGCCACAGGCCATGCCTCTACCAAGGA...GGGGAGCCGCACGACCTCACAAAGCTGCTCATCGCGGAGGTGAAGAGCAGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR CCA 90 bp ACCCTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCACACTCCCCTGCTTGGCTTaGCCCATTCCTGCCAGGGCC +
Preference number: 2 (lower is better)
Translates to: TLFLWEPQTSQVSRGNSTLPCLA*PIPARA
Trigger: GGCCCTGGCAGGAATGGGCCAAGCCAAGCAGGGGAG...TGTGCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR CCA 90 bp TGCAGCCCCGCAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCACCTCCGCCTGTTCTGGGACAGGTaGCTGTTGCCTAAGGATTCC +
Preference number: 2 (lower is better)
Translates to: CSPAVAALAIPRPALHLRLFWDR*LLPKDS
Trigger: GGAATCCTTAGGCAACAGCCACCTGTCCCAGAACAG...GCGGAGGTGAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGGGGCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR CCA 90 bp CATGTAGAGGGAAGGCAAAGGTCCCCGCCTGGGCCTGCTCCAGCAGCTCCTCACGAGGGGAGTAACAGCTaGTCCTGGAGAAGAACTGGG +
Preference number: 2 (lower is better)
Translates to: HVEGRQRSPPGPAPAAPHEGSNS*SWRRTG
Trigger: CCCAGTTCTTCTCCAGGACCAGCTGTTACTCCCCTC...GTGAGGAGCTGCTGGAGCAGGCCCAGGCGGGGACCTTTGCCTTCCCTCTACATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484418.1
ENST00000635167.1
3UTR-3UTR TCA 90 bp TGCCCTTGTGAAGCCCCCAGACTGACGGGGGAAATAGAGTCTCGATCTGATGAGGCTCTCCTGCCCTTGTaGAGCCCCCAGACTGACGGG +
Preference number: 2 (lower is better)
Translates to: CPCEAPRLTGEIESRSDEALLPL*SPQTDG
Trigger: CCCGTCAGTCTGGGGGCTTCACAAGGGCAGGAGAGC...CTCATCAGATCGAGACTCTATTTCCCCCGTCAGTCTGGGGGCTTCACAAGGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR GCA 90 bp GTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCACCTCCGCGATGAGCAGCTTCTCGTGCTCGTCCTCTaGCTGAAAGTGGTACGTCCG +
Preference number: 2 (lower is better)
Translates to: VAALAIPRPALHLRDEQLLVLVL*LKVVRP
Trigger: CGGACGTACCACTTTCAGGCAGAGGACGAGCACGAG...AAGCTGCTCATCGCGGAGGTGAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
3UTR-3UTR CCA 90 bp ACCCTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCACACATTGGGGCCTAGCATaGGGCATGTGGGGGCCAGCA +
Preference number: 2 (lower is better)
Translates to: TLFLWEPQTSQVSRGNSTHWGLA*GMWGPA
Trigger: TGCTGGCCCCCACATGCCCCATGCTAGGCCCCAATG...TGTGCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR CCA 90 bp CTCGTGCTCGTCCTCTGCCTGAAAGTGGTACGTCCGGTTGTGGGTCACCAGGTCCCCAGCTCTGAACATTaGGGCCTAGCATGGGGCATG +
Preference number: 2 (lower is better)
Translates to: LVLVLCLKVVRPVVGHQVPSSEH*GLAWGM
Trigger: CATGCCCCATGCTAGGCCCCAATGTTCAGAGCTGGG...GACCTGGTGACCCACAACCGGACGTACCACTTTCAGGCAGAGGACGAGCACGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR CCA 90 bp AGGCCTGCTCTTCACCTCCGCGATGAGCAGCTTTGTGAGGTCGTGCGGCTCCCCTTTCTCCTCAGGGTTTaGCCTCACTTGGCACGTCAG +
Preference number: 2 (lower is better)
Translates to: RPALHLRDEQLCEVVRLPFLLRV*PHLARQ
Trigger: CTGACGTGCCAAGTGAGGCCAAACCCTGAGGAGAAA...GGGGAGCCGCACGACCTCACAAAGCTGCTCATCGCGGAGGTGAAGAGCAGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
3UTR-3UTR CCA 90 bp TCTTCCTGGCTATGTCCAGAGCTGTCTCGCCTGCTTCATTTACTGTGCCAACCATGCGGCTCCCCATCATaGCCGGCGGACCCCCAGGAC +
Preference number: 2 (lower is better)
Translates to: SSWLCPELSRLLHLLCQPCGSPS*PADPQD
Trigger: GTCCTGGGGGTCCGCCGGCCATGATGGGGAGCCGCA...TGGTTGGCACAGTAAATGAAGCAGGCGAGACAGCTCTGGACATAGCCAGGAAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR TCA 90 bp TCCAGCCACAGGGCTCCCAGGCCCCTAGCGGGTAATGAGATAGGAAAGAACCGCCTCAAGTCCCAGCTCTaGACATTGGGGCCTAGCATG +
Preference number: 2 (lower is better)
Translates to: SSHRAPRPLAGNEIGKNRLKSQL*TLGPSM
Trigger: CATGCTAGGCCCCAATGTTCAGAGCTGGGACTTGAG...GCGGTTCTTTCCTATCTCATTACCCGCTAGGGGCCTGGGAGCCCTGTGGCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635461.1
ENST00000635693.1
3UTR-3UTR TCA 90 bp GGCCAGCAAGGAGCTAGTCTTGCAAAAGTTGCACAGAACTTGCTGGGAGACTCCGCTCTCCTGCCCTTGTaGAGCCCCCAGACTGACGGG +
Preference number: 2 (lower is better)
Translates to: GQQGASLAKVAQNLLGDSALLPL*SPQTDG
Trigger: CCCGTCAGTCTGGGGGCTTCACAAGGGCAGGAGAGC...GGAGTCTCCCAGCAAGTTCTGTGCAACTTTTGCAAGACTAGCTCCTTGCTGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618240.4
ENST00000635693.1
3UTR-3UTR GCA 90 bp ACAACCCTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCGATGGAGGGCTCTCCTaGCCTTGTGAAGCCCCCAGA +
Preference number: 2 (lower is better)
Translates to: TTLFLWEPQTSQVSRGNSDGGLS*PCEAPR
Trigger: TCTGGGGGCTTCACAAGGGCAGGAGAGCCCTCCATC...GCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAGGGTTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR GCA 90 bp GTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCACCTCCGCGATGAGCAGCTTTCGTCCTTGCTGTTCTaGAACACTGACACCCACGCC +
Preference number: 2 (lower is better)
Translates to: VAALAIPRPALHLRDEQLSSLLF*NTDTHA
Trigger: GGCGTGGGTGTCAGTGTTGCAGAACAGCAAGGACGA...AAGCTGCTCATCGCGGAGGTGAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
3UTR-3UTR GCA 90 bp AGGGAAGCCTGGTTGGCGACTTTGACAGCCAAATGCAAGACGAGTTCTTCAGGTGAGCCACGTGGGGTCTaGAGCCCCGCAGTCGCAGCA +
Preference number: 2 (lower is better)
Translates to: REAWLATLTAKCKTSSSGEPRGV*SPAVAA
Trigger: TGCTGCGACTGCGGGGCTGCAGACCCCACGTGGCTC...ACCTGAAGAACTCGTCTTGCATTTGGCTGTCAAAGTCGCCAACCAGGCTTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR GCA 90 bp TCCTGCCCATTGGCAAAGGCCTCCAGTACCGACAGGAGGTCCCTGTTGCAAATGCGACCGTCCCTCAGCTaGCCCTTCATCAGACTGTCC +
Preference number: 2 (lower is better)
Translates to: SCPLAKASSTDRRSLLQMRPSLS*PFIRLS
Trigger: GGACAGTCTGATGAAGGGGCAGCTGAGGGACGGTCG...CATTTGCAACAGGGACCTCCTGTCGGTACTGGAGGCCTTTGCCAATGGGCAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR CCA 90 bp GAGGGACTGAGAGTTCTGCAGCTGAAGCCAGCTCAGGAGCACTCAGATCCAGCCCCCAGCTCTGAACATTaGGGCCTAGCATGGGGCATG +
Preference number: 2 (lower is better)
Translates to: EGLRVLQLKPAQEHSDPAPSSEH*GLAWGM
Trigger: CATGCCCCATGCTAGGCCCCAATGTTCAGAGCTGGG...GGCTGGATCTGAGTGCTCCTGAGCTGGCTTCAGCTGCAGAACTCTCAGTCCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635461.1
ENST00000635693.1
3UTR-3UTR CCA 90 bp CTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCACAGCCCCCAGCTCTGAACATTaGGGCCTAGCATGGGGCATG +
Preference number: 2 (lower is better)
Translates to: LFLWEPQTSQVSRGNSTAPSSEH*GLAWGM
Trigger: CATGCCCCATGCTAGGCCCCAATGTTCAGAGCTGGG...GGCTGTGCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR CCA 90 bp CTTGGCAGGGTCCCTGATCTGGAAGTCAGTGATGGAGGGCTCTCCTGCCCTTGTCCCAGCTCTGAACATTaGGGCCTAGCATGGGGCATG +
Preference number: 2 (lower is better)
Translates to: LGRVPDLEVSDGGLSCPCPSSEH*GLAWGM
Trigger: CATGCCCCATGCTAGGCCCCAATGTTCAGAGCTGGG...ACAAGGGCAGGAGAGCCCTCCATCACTGACTTCCAGATCAGGGACCCTGCCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR CCA 90 bp TCCAGCCACAGGGCTCCCAGGCCCCTAGCGGGTAATGAGATAGGAAAGAACCGCTCCTTGGTAGAGGCATaGCCTGTGGCAGGAAGAAGG +
Preference number: 2 (lower is better)
Translates to: SSHRAPRPLAGNEIGKNRSLVEA*PVAGRR
Trigger: CCTTCTTCCTGCCACAGGCCATGCCTCTACCAAGGA...GCGGTTCTTTCCTATCTCATTACCCGCTAGGGGCCTGGGAGCCCTGTGGCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635461.1
ENST00000635693.1
3UTR-3UTR CCA 90 bp CCAGCTTTCCACCAAAGGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGGTGCAGGGTCCCTGATCTaGAAGTCAGTGATGGAGGGC +
Preference number: 2 (lower is better)
Translates to: PAFHQRTTPAGPLSYSCGAGSLI*KSVMEG
Trigger: GCCCTCCATCACTGACTTCCAGATCAGGGACCCTGC...ACCACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR CCA 90 bp GGCCAGCAAGGAGCTAGTCTTGCAAAAGTTGCACAGAACTTGCTGGGAGACTCCCTCCCCTGCTTGGCTTaGCCCATTCCTGCCAGGGCC +
Preference number: 2 (lower is better)
Translates to: GQQGASLAKVAQNLLGDSLPCLA*PIPARA
Trigger: GGCCCTGGCAGGAATGGGCCAAGCCAAGCAGGGGAG...GGAGTCTCCCAGCAAGTTCTGTGCAACTTTTGCAAGACTAGCTCCTTGCTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618240.4
ENST00000635693.1
3UTR-3UTR CCA 90 bp TCTGCAACACTGACACCCACGCCTCACACTCGTGCTCGTCCTCTGCCTGAAAGTCCAAGGCCGGAGCTATaGATTGCCCGCACAGCCTTC +
Preference number: 2 (lower is better)
Translates to: SATLTPTPHTRARPLPESPRPEL*IARTAF
Trigger: GAAGGCTGTGCGGGCAATCCATAGCTCCGGCCTTGG...ACTTTCAGGCAGAGGACGAGCACGAGTGTGAGGCGTGGGTGTCAGTGTTGCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR CCA 90 bp CAAAGTCCTGCCCATTGGCAAAGGCCTCCAGTACCGACAGGAGGTCCCTGTTGCAAGGGGAACAGGCTCTaGGCAGCCTTCCAGCCATCT +
Preference number: 2 (lower is better)
Translates to: QSPAHWQRPPVPTGGPCCKGNRL*AAFQPS
Trigger: AGATGGCTGGAAGGCTGCCCAGAGCCTGTTCCCCTT...GCAACAGGGACCTCCTGTCGGTACTGGAGGCCTTTGCCAATGGGCAGGACTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR CAA 90 bp GGTTTAGGGCCGCCGTGTGAGGGTAGCTGGGCCTCCATGACCTCATaGAAGCTCGTGTTTCCCATGTTCAAGGCCAGCAACAACTCGGAG +
Preference number: 2 (lower is better)
Translates to: GLGPPCEGSWASMTS*KLVFPMFKASNNSE
Trigger: CTCCGAGTTGTTGCTGGCCTTGAACATGGGAAACACGAGCTTCAATGAGGTCATGGAGGCCCAGCTACCCTCACACGGCGGCCCTAAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR TCA 90 bp CTGATCTGGAAGTCAGTGATGGAGGGCTCTCCTGCCCTTGTGAAGCCCCCAGACCTCAAGTCCCAGCTCTaGACATTGGGGCCTAGCATG +
Preference number: 2 (lower is better)
Translates to: LIWKSVMEGSPALVKPPDLKSQL*TLGPSM
Trigger: CATGCTAGGCCCCAATGTTCAGAGCTGGGACTTGAG...GTCTGGGGGCTTCACAAGGGCAGGAGAGCCCTCCATCACTGACTTCCAGATCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR TCA 90 bp GGCATCCAGGTGACCACCGTTCTGGATGATGAAATCCACCAGAGGCAGGGAAGCTGCTCGTCCTCTGCCTaGAAGTGGTACGTCCGGTTG +
Preference number: 2 (lower is better)
Translates to: GIQVTTVLDDEIHQRQGSCSSSA*KWYVRL
Trigger: CAACCGGACGTACCACTTTCAGGCAGAGGACGAGCA...GCTTCCCTGCCTCTGGTGGATTTCATCATCCAGAACGGTGGTCACCTGGATGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR GCA 90 bp CCTGCCTATTCCCAAGCCCAACCCTTAAGACCAGCTTTCCACCAAAGGACCACCGATGGAGGGCTCTCCTaGCCTTGTGAAGCCCCCAGA +
Preference number: 2 (lower is better)
Translates to: PAYSQAQPLRPAFHQRTTDGGLS*PCEAPR
Trigger: TCTGGGGGCTTCACAAGGGCAGGAGAGCCCTCCATC...GGTGGTCCTTTGGTGGAAAGCTGGTCTTAAGGGTTGGGCTTGGGAATAGGCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR GCA 90 bp AGCAGGTCCAAGGTGAGTGACTGCATGCGCGAAAAGCGCACGCCCAGTTCGCGGTCAGGGCTTCGTCCTTaGTGTTCTGCAACACTGACA +
Preference number: 2 (lower is better)
Translates to: SRSKVSDCMREKRTPSSRSGLRP*CSATLT
Trigger: TGTCAGTGTTGCAGAACAGCAAGGACGAAGCCCTGA...CCGCGAACTGGGCGTGCGCTTTTCGCGCATGCAGTCACTCACCTTGGACCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
3UTR-3UTR GCA 90 bp CAGGCTCTGTGGAAATTACCCAGGAGTAGTCCACATGTAGAGGGAAGGCAAAGGCCCCGAGGAAGGCGCTaGTCAGGGCTTCGTCCTTGC +
Preference number: 2 (lower is better)
Translates to: QALWKLPRSSPHVEGRQRPRGRR*SGLRPC
Trigger: GCAAGGACGAAGCCCTGAGCAGCGCCTTCCTCGGGG...CCTTTGCCTTCCCTCTACATGTGGACTACTCCTGGGTAATTTCCACAGAGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR GCA 90 bp CAGAGCCGTGTTCCCGTCAGCAGCCTTGGCATCCAGGTGACCACCGTTCTGGATACGGCCTCTCGGTACTaGTCTTCATTCTCCACATGG +
Preference number: 2 (lower is better)
Translates to: QSRVPVSSLGIQVTTVLDTASRY*SSFSTW
Trigger: CCATGTGGAGAATGAAGAGCAGTACCGAGAGGCCGT...ATCCAGAACGGTGGTCACCTGGATGCCAAGGCTGCTGACGGGAACACGGCTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR CCA 90 bp AGGGCTCCCAGGCCCCTAGCGGGTAATGAGATAGGAAAGAACCGCCATCAGTCCTCCTTGGTAGAGGCATaGCCTGTGGCAGGAAGAAGG +
Preference number: 2 (lower is better)
Translates to: RAPRPLAGNEIGKNRHQSSLVEA*PVAGRR
Trigger: CCTTCTTCCTGCCACAGGCCATGCCTCTACCAAGGA...GGACTGATGGCGGTTCTTTCCTATCTCATTACCCGCTAGGGGCCTGGGAGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635461.1
ENST00000635693.1
3UTR-3UTR CCA 90 bp CTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCACAGCCTCCTTGGTAGAGGCATaGCCTGTGGCAGGAAGAAGG +
Preference number: 2 (lower is better)
Translates to: LFLWEPQTSQVSRGNSTASLVEA*PVAGRR
Trigger: CCTTCTTCCTGCCACAGGCCATGCCTCTACCAAGGA...GGCTGTGCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR CCA 90 bp CAGCTGTGTTGGCCATTGGTGCTCTCTAGTCTCCCCTGCTTGGCTTGGCCCATTCTAGTCTCCCCTGCTTaGCTTGGCCCATTCCTGCCA +
Preference number: 2 (lower is better)
Translates to: QLCWPLVLSSLPCLAWPILVSPA*LGPFLP
Trigger: TGGCAGGAATGGGCCAAGCCAAGCAGGGGAGACTAG...AATGGGCCAAGCCAAGCAGGGGAGACTAGAGAGCACCAATGGCCAACACAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR CCA 90 bp CCTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCACAGCGCCAGGCAGCTGTGTTaGCCATTGGTGCTCTCTAGT +
Preference number: 2 (lower is better)
Translates to: PVPVGTTDQSGLQGKQHSARQLC*PLVLSS
Trigger: ACTAGAGAGCACCAATGGCCAACACAGCTGCCTGGC...GCTGTGCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR CCA 90 bp CCTCATCCTCCTCACTGTCAGAGCCAGGCTCTGTGGAAATTACCCAGGAGTAGTTCCCTCCTGTCACCCTaGCCCGATCGCGCTCCTTCT +
Preference number: 2 (lower is better)
Translates to: PHPPHCQSQALWKLPRSSSLLSP*PDRAPS
Trigger: AGAAGGAGCGCGATCGGGCCAGGGTGACAGGAGGGA...ACTACTCCTGGGTAATTTCCACAGAGCCTGGCTCTGACAGTGAGGAGGATGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR CCA 90 bp TCCTGCCCATTGGCAAAGGCCTCCAGTACCGACAGGAGGTCCCTGTTGCAAATGAAGGGGAACAGGCTCTaGGCAGCCTTCCAGCCATCT +
Preference number: 2 (lower is better)
Translates to: SCPLAKASSTDRRSLLQMKGNRL*AAFQPS
Trigger: AGATGGCTGGAAGGCTGCCCAGAGCCTGTTCCCCTT...CATTTGCAACAGGGACCTCCTGTCGGTACTGGAGGCCTTTGCCAATGGGCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR CAA 90 bp AGGAAGCCTGTGGACAGCTCATGGCTGTTCTGGGACAGGTGGCTGTaGCCTAAGGATTCCACGGCCTCTCGGTACTGCTCTTCATTCTCC +
Preference number: 2 (lower is better)
Translates to: RKPVDSSWLFWDRWL*PKDSTASRYCSSFS
Trigger: GGAGAATGAAGAGCAGTACCGAGAGGCCGTGGAATCCTTAGGCAACAGCCACCTGTCCCAGAACAGCCATGAGCTGTCCACAGGCTTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR TCA 90 bp TCCTGCCCATTGGCAAAGGCCTCCAGTACCGACAGGAGGTCCCTGTTGCAAATGATGGAGTGCATGTACTaGGGCCGCCAGCTTCTCGAT +
Preference number: 2 (lower is better)
Translates to: SCPLAKASSTDRRSLLQMMECMY*GRQLLD
Trigger: ATCGAGAAGCTGGCGGCCTCAGTACATGCACTCCAT...CATTTGCAACAGGGACCTCCTGTCGGTACTGGAGGCCTTTGCCAATGGGCAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR GCA 90 bp CAAAGTCCTGCCCATTGGCAAAGGCCTCCAGTACCGACAGGAGGTCCCTGTTGCACGGCCTCTCGGTACTaGTCTTCATTCTCCACATGG +
Preference number: 2 (lower is better)
Translates to: QSPAHWQRPPVPTGGPCCTASRY*SSFSTW
Trigger: CCATGTGGAGAATGAAGAGCAGTACCGAGAGGCCGT...GCAACAGGGACCTCCTGTCGGTACTGGAGGCCTTTGCCAATGGGCAGGACTTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR GCA 90 bp AAAGTTGTGCTGGGCGTGGAAGAACTTGATGAGGCTCTGAAGGAAGTCAGGACCATGCGCCGCTCTCTCTaGATGTCCTGGGCCACCTCC +
Preference number: 2 (lower is better)
Translates to: KVVLGVEELDEALKEVRTMRRSL*MSWATS
Trigger: GGAGGTGGCCCAGGACATGCAGAGAGAGCGGCGCAT...GGTCCTGACTTCCTTCAGAGCCTCATCAAGTTCTTCCACGCCCAGCACAACTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR GCA 90 bp CAGGGGTCTCAGGGGCCTCTGAACTCAGGCTGGAGACTTCAGAACGATCTCCACTTCTCCGTCCCAAACTaGTTGTTGCCTTGGTGCTGG +
Preference number: 2 (lower is better)
Translates to: QGSQGPLNSGWRLQNDLHFSVPN*LLPWCW
Trigger: CCAGCACCAAGGCAACAAGCAGTTTGGGACGGAGAA...GTGGAGATCGTTCTGAAGTCTCCAGCCTGAGTTCAGAGGCCCCTGAGACCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR CCA 90 bp AAAGAACCGCCATCAGTCCTAACAGGGAAAGGCCATGTGTCCTTGGTAGAGGCACATTGGGGCCTAGCATaGGGCATGTGGGGGCCAGCA +
Preference number: 2 (lower is better)
Translates to: KEPPSVLTGKGHVSLVEAHWGLA*GMWGPA
Trigger: TGCTGGCCCCCACATGCCCCATGCTAGGCCCCAATG...TGCCTCTACCAAGGACACATGGCCTTTCCCTGTTAGGACTGATGGCGGTTCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000492982.6
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635461.1
ENST00000635693.1
3UTR-3UTR CCA 90 bp TCTCGATCTGATGAGGGACTGAGAGTTCTGCAGCTGAAGCCAGCTCAGGAGCACCCCAGCTCTGAACATTaGGGCCTAGCATGGGGCATG +
Preference number: 2 (lower is better)
Translates to: SRSDEGLRVLQLKPAQEHPSSEH*GLAWGM
Trigger: CATGCCCCATGCTAGGCCCCAATGTTCAGAGCTGGG...GTGCTCCTGAGCTGGCTTCAGCTGCAGAACTCTCAGTCCCTCATCAGATCGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635461.1
ENST00000635693.1
3UTR-3UTR CCA 90 bp TGCCCTTGTGAAGCCCCCAGACTGACGGGGGAAATAGAGTCTCGATCTGATGAGGCAGGGTCCCTGATCTaGAAGTCAGTGATGGAGGGC +
Preference number: 2 (lower is better)
Translates to: CPCEAPRLTGEIESRSDEAGSLI*KSVMEG
Trigger: GCCCTCCATCACTGACTTCCAGATCAGGGACCCTGC...CTCATCAGATCGAGACTCTATTTCCCCCGTCAGTCTGGGGGCTTCACAAGGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR CCA 90 bp GGCAGGGAAGCCTGGTTGGCGACTTTGACAGCCAAATGCAAGACGAGTTCTTCACCAAGGCCGGAGCTATaGATTGCCCGCACAGCCTTC +
Preference number: 2 (lower is better)
Translates to: GREAWLATLTAKCKTSSSPRPEL*IARTAF
Trigger: GAAGGCTGTGCGGGCAATCCATAGCTCCGGCCTTGG...TGAAGAACTCGTCTTGCATTTGGCTGTCAAAGTCGCCAACCAGGCTTCCCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR CCA 90 bp TCTTTCCTTCTGCCATCCAGAGGCCTGAGGGACAGGGCTGGGACCCACCTTCTCCAGAGCCAGGCTCTGTaGAAATTACCCAGGAGTAGT +
Preference number: 2 (lower is better)
Translates to: SFLLPSRGLRDRAGTHLLQSQAL*KLPRSS
Trigger: ACTACTCCTGGGTAATTTCCACAGAGCCTGGCTCTG...GAGAAGGTGGGTCCCAGCCCTGTCCCTCAGGCCTCTGGATGGCAGAAGGAAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR CCA 90 bp GCTAGTCTTGCAAAAGTTGCACAGAACTTGCTGGGAGACTCCCAGTCCTTGAGCATGTCAGGCTGGGTCTaGAGGTGCCTGGGGGCTCTC +
Preference number: 2 (lower is better)
Translates to: ASLAKVAQNLLGDSQSLSMSGWV*RCLGAL
Trigger: GAGAGCCCCCAGGCACCTCCAGACCCAGCCTGACAT...GCTCAAGGACTGGGAGTCTCCCAGCAAGTTCTGTGCAACTTTTGCAAGACTAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR CAA 90 bp GCTGGAGACTTCAGAACGATCTCCACTGGCATGTCTTGCACACCCTaGGACCAAAGTCCGAGAAGAGTTTTTGACTGGCAAGGGCGGGGG +
Preference number: 2 (lower is better)
Translates to: AGDFRTISTGMSCTP*DQSPRRVFDWQGRG
Trigger: CCCCCGCCCTTGCCAGTCAAAAACTCTTCTCGGACTTTGGTCCAAGGGTGTGCAAGACATGCCAGTGGAGATCGTTCTGAAGTCTCCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR TCA 90 bp TCTCGATCTGATGAGGGACTGAGAGTTCTGCAGCTGAAGCCAGCTCAGGAGCACCTCAAGTCCCAGCTCTaGACATTGGGGCCTAGCATG +
Preference number: 2 (lower is better)
Translates to: SRSDEGLRVLQLKPAQEHLKSQL*TLGPSM
Trigger: CATGCTAGGCCCCAATGTTCAGAGCTGGGACTTGAG...GTGCTCCTGAGCTGGCTTCAGCTGCAGAACTCTCAGTCCCTCATCAGATCGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635461.1
ENST00000635693.1
3UTR-3UTR TCA 90 bp CCTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCACAGCGTACAGCATGCATGTTaGCCAGCCAGAATGGATGTG +
Preference number: 2 (lower is better)
Translates to: PVPVGTTDQSGLQGKQHSVQHAC*PARMDV
Trigger: CACATCCATTCTGGCTGGTCAACATGCATGCTGTAC...GCTGTGCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR GCA 90 bp TCTTCCTGGCTATGTCCAGAGCTGTCTCGCCTGCTTCATTTACTGTGCCAACCAAGCTTTGTGAGGTCGTaGGGCTCCCCATCATGGCCG +
Preference number: 2 (lower is better)
Translates to: SSWLCPELSRLLHLLCQPSFVRS*GSPSWP
Trigger: CGGCCATGATGGGGAGCCGCACGACCTCACAAAGCT...TGGTTGGCACAGTAAATGAAGCAGGCGAGACAGCTCTGGACATAGCCAGGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR GCA 90 bp TCCTGCCCATTGGCAAAGGCCTCCAGTACCGACAGGAGGTCCCTGTTGCAAATGTCCCAAACTGCTTGTTaGCTTGGTGCTGGTGGATGC +
Preference number: 2 (lower is better)
Translates to: SCPLAKASSTDRRSLLQMSQTAC*LGAGGC
Trigger: GCATCCACCAGCACCAAGGCAACAAGCAGTTTGGGA...CATTTGCAACAGGGACCTCCTGTCGGTACTGGAGGCCTTTGCCAATGGGCAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR GCA 90 bp TCTTTCCTTCTGCCATCCAGAGGCCTGAGGGACAGGGCTGGGACCCACCTTCTCCCACACTTCCTTTTCTaGCAGACTCTTCGAATTCCG +
Preference number: 2 (lower is better)
Translates to: SFLLPSRGLRDRAGTHLLPHFLF*QTLRIP
Trigger: CGGAATTCGAAGAGTCTGGCAGAAAAGGAAGTGTGG...GAGAAGGTGGGTCCCAGCCCTGTCCCTCAGGCCTCTGGATGGCAGAAGGAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR CCA 90 bp CCTGAAAGTGGTACGTCCGGTTGTGGGTCACCAGGTCGAAGCACTTTTTCTCCTCCCAGCTCTGAACATTaGGGCCTAGCATGGGGCATG +
Preference number: 2 (lower is better)
Translates to: PESGTSGCGSPGRSTFSPPSSEH*GLAWGM
Trigger: CATGCCCCATGCTAGGCCCCAATGTTCAGAGCTGGG...AGGAGAAAAAGTGCTTCGACCTGGTGACCCACAACCGGACGTACCACTTTCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR CCA 90 bp GAGTCTCGATCTGATGAGGGACTGAGAGTTCTGCAGCTGAAGCCAGCTCAGGAGTCCTTGGTAGAGGCATaGCCTGTGGCAGGAAGAAGG +
Preference number: 2 (lower is better)
Translates to: ESRSDEGLRVLQLKPAQESLVEA*PVAGRR
Trigger: CCTTCTTCCTGCCACAGGCCATGCCTCTACCAAGGA...CTCCTGAGCTGGCTTCAGCTGCAGAACTCTCAGTCCCTCATCAGATCGAGACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635461.1
ENST00000635693.1
3UTR-3UTR CCA 90 bp GCCTATTCCCAAGCCCAACCCTTAAGACCAGCTTTCCACCAAAGGACCACCCCTTCCTTGGTAGAGGCATaGCCTGTGGCAGGAAGAAGG +
Preference number: 2 (lower is better)
Translates to: AYSQAQPLRPAFHQRTTPSLVEA*PVAGRR
Trigger: CCTTCTTCCTGCCACAGGCCATGCCTCTACCAAGGA...AGGGGTGGTCCTTTGGTGGAAAGCTGGTCTTAAGGGTTGGGCTTGGGAATAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR CCA 90 bp TCTCGATCTGATGAGGGACTGAGAGTTCTGCAGCTGAAGCCAGCTCAGGAGCACTCCTTGGTAGAGGCATaGCCTGTGGCAGGAAGAAGG +
Preference number: 2 (lower is better)
Translates to: SRSDEGLRVLQLKPAQEHSLVEA*PVAGRR
Trigger: CCTTCTTCCTGCCACAGGCCATGCCTCTACCAAGGA...GTGCTCCTGAGCTGGCTTCAGCTGCAGAACTCTCAGTCCCTCATCAGATCGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635461.1
ENST00000635693.1
3UTR-3UTR CCA 90 bp TCTGCAACACTGACACCCACGCCTCACACTCGTGCTCGTCCTCTGCCTGAAAGTTTTCTCCTCAGGGTTTaGCCTCACTTGGCACGTCAG +
Preference number: 2 (lower is better)
Translates to: SATLTPTPHTRARPLPESFLLRV*PHLARQ
Trigger: CTGACGTGCCAAGTGAGGCCAAACCCTGAGGAGAAA...ACTTTCAGGCAGAGGACGAGCACGAGTGTGAGGCGTGGGTGTCAGTGTTGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
3UTR-3UTR CCA 90 bp CAGGGGTCTCAGGGGCCTCTGAACTCAGGCTGGAGACTTCAGAACGATCTCCACAAGTTGTGCTGGGCGTaGAAGAACTTGATGAGGCTC +
Preference number: 2 (lower is better)
Translates to: QGSQGPLNSGWRLQNDLHKLCWA*KNLMRL
Trigger: GAGCCTCATCAAGTTCTTCCACGCCCAGCACAACTT...GTGGAGATCGTTCTGAAGTCTCCAGCCTGAGTTCAGAGGCCCCTGAGACCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR CCA 90 bp GCTAGTCTTGCAAAAGTTGCACAGAACTTGCTGGGAGACTCCCAGTCCTTGAGCTGGGCAGAGGCTGCCTaGCTGAGGGACCATCTTCAG +
Preference number: 2 (lower is better)
Translates to: ASLAKVAQNLLGDSQSLSWAEAA*LRDHLQ
Trigger: CTGAAGATGGTCCCTCAGCCAGGCAGCCTCTGCCCA...GCTCAAGGACTGGGAGTCTCCCAGCAAGTTCTGTGCAACTTTTGCAAGACTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000492982.6
ENST00000618240.4
ENST00000634705.1
ENST00000635693.1
3UTR-3UTR CCA 90 bp AAGCAGCGCTTCTCTTCCTCATCCTCCTCACTGTCAGAGCCAGGCTCTGTGGAAATGTCAGAGGTGGGGTaGAGGGGAGTAACAGCTGGT +
Preference number: 2 (lower is better)
Translates to: KQRFSSSSSSLSEPGSVEMSEVG*RGVTAG
Trigger: ACCAGCTGTTACTCCCCTCCACCCCACCTCTGACAT...TTCCACAGAGCCTGGCTCTGACAGTGAGGAGGATGAGGAAGAGAAGCGCTGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484418.1
ENST00000635167.1
3UTR CAA 90 bp CCACCGTTCTGGATGATGAAATCCACCAGAGGCAGGGAAGCCTGGTaGGCGACTTTGACAGCCAAATGCAAGACGAGTTCTTCAGGTGCC +
Preference number: 2 (lower is better)
Translates to: PPFWMMKSTRGREAW*ATLTAKCKTSSSGA
Trigger: GGCACCTGAAGAACTCGTCTTGCATTTGGCTGTCAAAGTCGCCAACCAGGCTTCCCTGCCTCTGGTGGATTTCATCATCCAGAACGGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
3UTR-3UTR TCA 90 bp ACAACCCTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCGTACAGCATGCATGTTaGCCAGCCAGAATGGATGTG +
Preference number: 2 (lower is better)
Translates to: TTLFLWEPQTSQVSRGNSVQHAC*PARMDV
Trigger: CACATCCATTCTGGCTGGTCAACATGCATGCTGTAC...GCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAGGGTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR TCA 90 bp CCTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCACAGCAAATGTGGGTGCATCTaGCTCTACAATTTGGCTGGG +
Preference number: 2 (lower is better)
Translates to: PVPVGTTDQSGLQGKQHSKCGCI*LYNLAG
Trigger: CCCAGCCAAATTGTAGAGTCAGATGCACCCACATTT...GCTGTGCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR TCA 90 bp AAAGTTGTGCTGGGCGTGGAAGAACTTGATGAGGCTCTGAAGGAAGTCAGGACCCAGCAACCTCGCGGGTaGACACGGCCAAGTTTAGGA +
Preference number: 2 (lower is better)
Translates to: KVVLGVEELDEALKEVRTQQPRG*TRPSLG
Trigger: TCCTAAACTTGGCCGTGTTCACCCGCGAGGTTGCTG...GGTCCTGACTTCCTTCAGAGCCTCATCAAGTTCTTCCACGCCCAGCACAACTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR TCA 90 bp CCTCATCCTCCTCACTGTCAGAGCCAGGCTCTGTGGAAATTACCCAGGAGTAGTATGGAGTGCATGTACTaGGGCCGCCAGCTTCTCGAT +
Preference number: 2 (lower is better)
Translates to: PHPPHCQSQALWKLPRSSMECMY*GRQLLD
Trigger: ATCGAGAAGCTGGCGGCCTCAGTACATGCACTCCAT...ACTACTCCTGGGTAATTTCCACAGAGCCTGGCTCTGACAGTGAGGAGGATGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR CCA 90 bp TGGCTATGTCCAGAGCTGTCTCGCCTGCTTCATTTACTGTGCCAACCAAAGCTCTGGTACGTCCGGTTGTaGGTCACCAGGTCGAAGCAC +
Preference number: 2 (lower is better)
Translates to: WLCPELSRLLHLLCQPKLWYVRL*VTRSKH
Trigger: GTGCTTCGACCTGGTGACCCACAACCGGACGTACCA...GAGCTTTGGTTGGCACAGTAAATGAAGCAGGCGAGACAGCTCTGGACATAGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR CCA 90 bp AAATTACCCAGGAGTAGTCCACATGTAGAGGGAAGGCAAAGGTCCCCGCCTGGGCTGTTCTGGGACAGGTaGCTGTTGCCTAAGGATTCC +
Preference number: 2 (lower is better)
Translates to: KLPRSSPHVEGRQRSPPGLFWDR*LLPKDS
Trigger: GGAATCCTTAGGCAACAGCCACCTGTCCCAGAACAG...CCCAGGCGGGGACCTTTGCCTTCCCTCTACATGTGGACTACTCCTGGGTAATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR CCA 90 bp CAAAGTCCTGCCCATTGGCAAAGGCCTCCAGTACCGACAGGAGGTCCCTGTTGCGCTCCTTCTCCAGCTTaGCCATTTTGGCTTCATAGT +
Preference number: 2 (lower is better)
Translates to: QSPAHWQRPPVPTGGPCCAPSPA*PFWLHS
Trigger: ACTATGAAGCCAAAATGGCCAAGCTGGAGAAGGAGC...GCAACAGGGACCTCCTGTCGGTACTGGAGGCCTTTGCCAATGGGCAGGACTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR TCA 90 bp AAAGAACCGCCATCAGTCCTAACAGGGAAAGGCCATGTGTCCTTGGTAGAGGCACTCAAGTCCCAGCTCTaGACATTGGGGCCTAGCATG +
Preference number: 2 (lower is better)
Translates to: KEPPSVLTGKGHVSLVEALKSQL*TLGPSM
Trigger: CATGCTAGGCCCCAATGTTCAGAGCTGGGACTTGAG...TGCCTCTACCAAGGACACATGGCCTTTCCCTGTTAGGACTGATGGCGGTTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000492982.6
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635461.1
ENST00000635693.1
3UTR-3UTR TCA 90 bp CCTCATCCTCCTCACTGTCAGAGCCAGGCTCTGTGGAAATTACCCAGGAGTAGTTCTGAATCAGGTTCTTaGAGAGCGCAGCAACCTCGC +
Preference number: 2 (lower is better)
Translates to: PHPPHCQSQALWKLPRSSSESGS*RAQQPR
Trigger: GCGAGGTTGCTGCGCTCTTCAAGAACCTGATTCAGA...ACTACTCCTGGGTAATTTCCACAGAGCCTGGCTCTGACAGTGAGGAGGATGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR TCA 90 bp GGCAGGGAAGCCTGGTTGGCGACTTTGACAGCCAAATGCAAGACGAGTTCTTCATGCCACTCTGATGGGTaGGATCTGAGCAGATGTCAG +
Preference number: 2 (lower is better)
Translates to: GREAWLATLTAKCKTSSSCHSDG*DLSRCQ
Trigger: CTGACATCTGCTCAGATCTCACCCATCAGAGTGGCA...TGAAGAACTCGTCTTGCATTTGGCTGTCAAAGTCGCCAACCAGGCTTCCCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484418.1
ENST00000635167.1
3UTR-3UTR GCA 90 bp GCTAGTCTTGCAAAAGTTGCACAGAACTTGCTGGGAGACTCCCAGTCCTTGAGCTCGTCCTTGCTGTTCTaGAACACTGACACCCACGCC +
Preference number: 2 (lower is better)
Translates to: ASLAKVAQNLLGDSQSLSSSLLF*NTDTHA
Trigger: GGCGTGGGTGTCAGTGTTGCAGAACAGCAAGGACGA...GCTCAAGGACTGGGAGTCTCCCAGCAAGTTCTGTGCAACTTTTGCAAGACTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR GCA 90 bp CCTCATCCTCCTCACTGTCAGAGCCAGGCTCTGTGGAAATTACCCAGGAGTAGTAGGTGTGCACCGGCGTaGAAACCTATGCTCCACATA +
Preference number: 2 (lower is better)
Translates to: PHPPHCQSQALWKLPRSSRCAPA*KPMLHI
Trigger: TATGTGGAGCATAGGTTTGCACGCCGGTGCACACCT...ACTACTCCTGGGTAATTTCCACAGAGCCTGGCTCTGACAGTGAGGAGGATGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR CCA 90 bp CAGGCAAATGTGGGTGCATCTGACTCTACAATTTGGCTGGGGAATATAGGAGAACATTGGGGCCTAGCATaGGGCATGTGGGGGCCAGCA +
Preference number: 2 (lower is better)
Translates to: QANVGASDSTIWLGNIGEHWGLA*GMWGPA
Trigger: TGCTGGCCCCCACATGCCCCATGCTAGGCCCCAATG...TTCTCCTATATTCCCCAGCCAAATTGTAGAGTCAGATGCACCCACATTTGCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR CCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGCATTGGGGCCTAGCATaGGGCATGTGGGGGCCAGCA +
Preference number: 2 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKHWGLA*GMWGPA
Trigger: TGCTGGCCCCCACATGCCCCATGCTAGGCCCCAATG...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 12 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000465372.5
ENST00000492982.6
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
ENST00000635461.1
ENST00000635693.1
3UTR-3UTR CCA 90 bp GATAGGAAAGAACCGCCATCAGTCCTAACAGGGAAAGGCCATGTGTCCTTGGTACCCAGCTCTGAACATTaGGGCCTAGCATGGGGCATG +
Preference number: 2 (lower is better)
Translates to: DRKEPPSVLTGKGHVSLVPSSEH*GLAWGM
Trigger: CATGCCCCATGCTAGGCCCCAATGTTCAGAGCTGGG...TACCAAGGACACATGGCCTTTCCCTGTTAGGACTGATGGCGGTTCTTTCCTATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000492982.6
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635461.1
ENST00000635693.1
3UTR-3UTR CCA 90 bp GGCCAGCAAGGAGCTAGTCTTGCAAAAGTTGCACAGAACTTGCTGGGAGACTCCTCCAGAGCCATGCCCTaGAATCTGACCCTGCCTATT +
Preference number: 2 (lower is better)
Translates to: GQQGASLAKVAQNLLGDSSRAMP*NLTLPI
Trigger: AATAGGCAGGGTCAGATTCCAGGGCATGGCTCTGGA...GGAGTCTCCCAGCAAGTTCTGTGCAACTTTTGCAAGACTAGCTCCTTGCTGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618240.4
ENST00000635693.1
3UTR-3UTR CCA 90 bp ACAACCCTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCAATGAAACCAGACACTaGGGGCTCAAAAGACAACCC +
Preference number: 2 (lower is better)
Translates to: TTLFLWEPQTSQVSRGNSNETRH*GLKRQP
Trigger: GGGTTGTCTTTTGAGCCCCCAGTGTCTGGTTTCATT...GCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAGGGTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR CCA 90 bp CTGTGGAAATTACCCAGGAGTAGTCCACATGTAGAGGGAAGGCAAAGGTCCCCGTTTCTCCTCAGGGTTTaGCCTCACTTGGCACGTCAG +
Preference number: 2 (lower is better)
Translates to: LWKLPRSSPHVEGRQRSPFLLRV*PHLARQ
Trigger: CTGACGTGCCAAGTGAGGCCAAACCCTGAGGAGAAA...CGGGGACCTTTGCCTTCCCTCTACATGTGGACTACTCCTGGGTAATTTCCACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR CCA 90 bp TCTTCCTCATCCTCCTCACTGTCAGAGCCAGGCTCTGTGGAAATTACCCAGGAGTCTTCATTCTCCACATaGCCAAGGCCGGAGCTATGG +
Preference number: 2 (lower is better)
Translates to: SSSSSSLSEPGSVEITQESSFST*PRPELW
Trigger: CCATAGCTCCGGCCTTGGCCATGTGGAGAATGAAGA...CTCCTGGGTAATTTCCACAGAGCCTGGCTCTGACAGTGAGGAGGATGAGGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR CCA 90 bp CCTCATCCTCCTCACTGTCAGAGCCAGGCTCTGTGGAAATTACCCAGGAGTAGTTCTTCATTCTCCACATaGCCAAGGCCGGAGCTATGG +
Preference number: 2 (lower is better)
Translates to: PHPPHCQSQALWKLPRSSSSFST*PRPELW
Trigger: CCATAGCTCCGGCCTTGGCCATGTGGAGAATGAAGA...ACTACTCCTGGGTAATTTCCACAGAGCCTGGCTCTGACAGTGAGGAGGATGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR CCA 90 bp TGTCAGAGCCAGGCTCTGTGGAAATTACCCAGGAGTAGTCCACATGTAGAGGGAATGTCAGAGGTGGGGTaGAGGGGAGTAACAGCTGGT +
Preference number: 2 (lower is better)
Translates to: CQSQALWKLPRSSPHVEGMSEVG*RGVTAG
Trigger: ACCAGCTGTTACTCCCCTCCACCCCACCTCTGACAT...TCCCTCTACATGTGGACTACTCCTGGGTAATTTCCACAGAGCCTGGCTCTGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484418.1
ENST00000635167.1
3UTR CAA 90 bp TGGATGATGAAATCCACCAGAGGCAGGGAAGCCTGGTTGGCGACTTaGACAGCCAAATGCAAGACGAGTTCTTCAGGTGCCTGTGCATCA +
Preference number: 2 (lower is better)
Translates to: WMMKSTRGREAWLAT*TAKCKTSSSGACAS
Trigger: TGATGCACAGGCACCTGAAGAACTCGTCTTGCATTTGGCTGTCAAAGTCGCCAACCAGGCTTCCCTGCCTCTGGTGGATTTCATCATCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR CAA 90 bp TGGATGATGAAATCCACCAGAGGCAGGGAAGCCTGGTTGGCGACTTaGACAGCCAAATGCAAGACGAGTTCTTCAGGTGCCACTCTGATG +
Preference number: 2 (lower is better)
Translates to: WMMKSTRGREAWLAT*TAKCKTSSSGATLM
Trigger: CATCAGAGTGGCACCTGAAGAACTCGTCTTGCATTTGGCTGTCAAAGTCGCCAACCAGGCTTCCCTGCCTCTGGTGGATTTCATCATCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484418.1
ENST00000635167.1
3UTR-3UTR GCA 90 bp CAGGCAAATGTGGGTGCATCTGACTCTACAATTTGGCTGGGGAATATAGGAGAAGATGGAGGGCTCTCCTaGCCTTGTGAAGCCCCCAGA +
Preference number: 2 (lower is better)
Translates to: QANVGASDSTIWLGNIGEDGGLS*PCEAPR
Trigger: TCTGGGGGCTTCACAAGGGCAGGAGAGCCCTCCATC...TTCTCCTATATTCCCCAGCCAAATTGTAGAGTCAGATGCACCCACATTTGCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR GCA 90 bp AGCCCACTTTCTCCGTCCCAAACTGCTTGTTGCCTTGGTGCTGGTGGATGCTATTCAGGGCTTCGTCCTTaGTGTTCTGCAACACTGACA +
Preference number: 2 (lower is better)
Translates to: SPLSPSQTACCLGAGGCYSGLRP*CSATLT
Trigger: TGTCAGTGTTGCAGAACAGCAAGGACGAAGCCCTGA...ATAGCATCCACCAGCACCAAGGCAACAAGCAGTTTGGGACGGAGAAAGTGGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR GCA 90 bp GCTAGTCTTGCAAAAGTTGCACAGAACTTGCTGGGAGACTCCCAGTCCTTGAGCACAGGAGGTCCCTGTTaGAAATGGCTGTCCAGAGTC +
Preference number: 2 (lower is better)
Translates to: ASLAKVAQNLLGDSQSLSTGGPC*KWLSRV
Trigger: GACTCTGGACAGCCATTTGCAACAGGGACCTCCTGT...GCTCAAGGACTGGGAGTCTCCCAGCAAGTTCTGTGCAACTTTTGCAAGACTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR GCA 90 bp GGCCAGCAAGGAGCTAGTCTTGCAAAAGTTGCACAGAACTTGCTGGGAGACTCCTCCACTGGCATGTCTTaGACACCCTTGGACCAAAGT +
Preference number: 2 (lower is better)
Translates to: GQQGASLAKVAQNLLGDSSTGMS*TPLDQS
Trigger: ACTTTGGTCCAAGGGTGTGCAAGACATGCCAGTGGA...GGAGTCTCCCAGCAAGTTCTGTGCAACTTTTGCAAGACTAGCTCCTTGCTGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR CCA 90 bp TCTGACTCTACAATTTGGCTGGGGAATATAGGAGAATGCCTAGGGAAGGCTGTGGCAGGGTCCCTGATCTaGAAGTCAGTGATGGAGGGC +
Preference number: 2 (lower is better)
Translates to: SDSTIWLGNIGECLGKAVAGSLI*KSVMEG
Trigger: GCCCTCCATCACTGACTTCCAGATCAGGGACCCTGC...CACAGCCTTCCCTAGGCATTCTCCTATATTCCCCAGCCAAATTGTAGAGTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR CCA 90 bp CCAGCTTTCCACCAAAGGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGGTAGACTAATAAATGGCTaGCTGAGAAGACAGTCCCTA +
Preference number: 2 (lower is better)
Translates to: PAFHQRTTPAGPLSYSCGRLING*LRRQSL
Trigger: TAGGGACTGTCTTCTCAGCCAGCCATTTATTAGTCT...ACCACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR GCA 90 bp CAGGCAAATGTGGGTGCATCTGACTCTACAATTTGGCTGGGGAATATAGGAGAACCAAAGGACCACCCCTaGAGGGCCCTTGTCTTACTC +
Preference number: 2 (lower is better)
Translates to: QANVGASDSTIWLGNIGEPKDHP*RALVLL
Trigger: GAGTAAGACAAGGGCCCTGCAGGGGTGGTCCTTTGG...TTCTCCTATATTCCCCAGCCAAATTGTAGAGTCAGATGCACCCACATTTGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR CCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGCCCAGCTCTGAACATTaGGGCCTAGCATGGGGCATG +
Preference number: 2 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKPSSEH*GLAWGM
Trigger: CATGCCCCATGCTAGGCCCCAATGTTCAGAGCTGGG...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000465372.5
ENST00000492982.6
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
ENST00000635461.1
ENST00000635693.1
3UTR-3UTR CCA 90 bp AACAAGTCTGAGATGAATGAAACCAGACACTGGGGGCTCAAAAGACAACCCTGTCCCAGCTCTGAACATTaGGGCCTAGCATGGGGCATG +
Preference number: 2 (lower is better)
Translates to: NKSEMNETRHWGLKRQPCPSSEH*GLAWGM
Trigger: CATGCCCCATGCTAGGCCCCAATGTTCAGAGCTGGG...ACAGGGTTGTCTTTTGAGCCCCCAGTGTCTGGTTTCATTCATCTCAGACTTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR CCA 90 bp CAGGCAAATGTGGGTGCATCTGACTCTACAATTTGGCTGGGGAATATAGGAGAACCCAGCTCTGAACATTaGGGCCTAGCATGGGGCATG +
Preference number: 2 (lower is better)
Translates to: QANVGASDSTIWLGNIGEPSSEH*GLAWGM
Trigger: CATGCCCCATGCTAGGCCCCAATGTTCAGAGCTGGG...TTCTCCTATATTCCCCAGCCAAATTGTAGAGTCAGATGCACCCACATTTGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR CCA 90 bp CAGGCAAATGTGGGTGCATCTGACTCTACAATTTGGCTGGGGAATATAGGAGAAGCAGGGTCCCTGATCTaGAAGTCAGTGATGGAGGGC +
Preference number: 2 (lower is better)
Translates to: QANVGASDSTIWLGNIGEAGSLI*KSVMEG
Trigger: GCCCTCCATCACTGACTTCCAGATCAGGGACCCTGC...TTCTCCTATATTCCCCAGCCAAATTGTAGAGTCAGATGCACCCACATTTGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR CCA 90 bp CAGCTGTGTTGGCCATTGGTGCTCTCTAGTCTCCCCTGCTTGGCTTGGCCCATTAGACTAATAAATGGCTaGCTGAGAAGACAGTCCCTA +
Preference number: 2 (lower is better)
Translates to: QLCWPLVLSSLPCLAWPIRLING*LRRQSL
Trigger: TAGGGACTGTCTTCTCAGCCAGCCATTTATTAGTCT...AATGGGCCAAGCCAAGCAGGGGAGACTAGAGAGCACCAATGGCCAACACAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR CCA 90 bp GGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGGTATCTGAAGTGCCTAACAGACTAATAAATGGCTaGCTGAGAAGACAGTCCCTA +
Preference number: 2 (lower is better)
Translates to: GPPLQGPCLTRVVSEVPNRLING*LRRQSL
Trigger: TAGGGACTGTCTTCTCAGCCAGCCATTTATTAGTCT...GTTAGGCACTTCAGATACCACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR CCA 90 bp GCTTTCCACCAAAGGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGGTATCCTTGTCTTACTCGTGTaGTATCTGAAGTGCCTAACA +
Preference number: 2 (lower is better)
Translates to: AFHQRTTPAGPLSYSCGILVLLV*YLKCLT
Trigger: TGTTAGGCACTTCAGATACCACACGAGTAAGACAAG...GATACCACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR CCA 90 bp AACAAGTCTGAGATGAATGAAACCAGACACTGGGGGCTCAAAAGACAACCCTGTCTAGTCTCCCCTGCTTaGCTTGGCCCATTCCTGCCA +
Preference number: 2 (lower is better)
Translates to: NKSEMNETRHWGLKRQPCLVSPA*LGPFLP
Trigger: TGGCAGGAATGGGCCAAGCCAAGCAGGGGAGACTAG...ACAGGGTTGTCTTTTGAGCCCCCAGTGTCTGGTTTCATTCATCTCAGACTTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR TCA 90 bp GGAAGGCTGTGCTGTCCCTCAAAAGGAGTGACATTCAGAATATTTTTATTTAACGCTCTCCTGCCCTTGTaGAGCCCCCAGACTGACGGG +
Preference number: 2 (lower is better)
Translates to: GRLCCPSKGVTFRIFLFNALLPL*SPQTDG
Trigger: CCCGTCAGTCTGGGGGCTTCACAAGGGCAGGAGAGC...GTTAAATAAAAATATTCTGAATGTCACTCCTTTTGAGGGACAGCACAGCCTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR TCA 90 bp ATGACCTCATTGAAGCTCGTGTTTCCCATGTTCAAGGCCAGCAACAACTCGGAGGTTTATCGTGCTGTGTaGGATGGTCAGGCAGCCATA +
Preference number: 2 (lower is better)
Translates to: MTSLKLVFPMFKASNNSEVYRAV*DGQAAI
Trigger: TATGGCTGCCTGACCATCTCACACAGCACGATAAAC...CTCCGAGTTGTTGCTGGCCTTGAACATGGGAAACACGAGCTTCAATGAGGTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR GCA 90 bp AACAAGTCTGAGATGAATGAAACCAGACACTGGGGGCTCAAAAGACAACCCTGTCTCTCTAGTCTCCCCTaGTTGGCTTGGCCCATTCCT +
Preference number: 2 (lower is better)
Translates to: NKSEMNETRHWGLKRQPCLSSLP*LAWPIP
Trigger: AGGAATGGGCCAAGCCAAGCAGGGGAGACTAGAGAG...ACAGGGTTGTCTTTTGAGCCCCCAGTGTCTGGTTTCATTCATCTCAGACTTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR GCA 90 bp ACCTCATTGAAGCTCGTGTTTCCCATGTTCAAGGCCAGCAACAACTCGGAGGGGTCTTGGAAAAAGTTGTaGTGGGCGTGGAAGAACTTG +
Preference number: 2 (lower is better)
Translates to: TSLKLVFPMFKASNNSEGSWKKL*WAWKNL
Trigger: CAAGTTCTTCCACGCCCAGCACAACTTTTTCCAAGA...CCCCTCCGAGTTGTTGCTGGCCTTGAACATGGGAAACACGAGCTTCAATGAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR CCA 90 bp GCCTATTCCCAAGCCCAACCCTTAAGACCAGCTTTCCACCAAAGGACCACCCCTAGACTAATAAATGGCTaGCTGAGAAGACAGTCCCTA +
Preference number: 2 (lower is better)
Translates to: AYSQAQPLRPAFHQRTTPRLING*LRRQSL
Trigger: TAGGGACTGTCTTCTCAGCCAGCCATTTATTAGTCT...AGGGGTGGTCCTTTGGTGGAAAGCTGGTCTTAAGGGTTGGGCTTGGGAATAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR CCA 90 bp ACAACCCTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCTCTGACTCTACAATTTaGCTGGGGAATATAGGAGAA +
Preference number: 2 (lower is better)
Translates to: TTLFLWEPQTSQVSRGNSSDSTI*LGNIGE
Trigger: TTCTCCTATATTCCCCAGCCAAATTGTAGAGTCAGA...GCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAGGGTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR TCA 90 bp GCACCCAGCAACTGGCAAGTTGAGATGTTAGTGGTTGATGATGGCTTAGGTGTAGGCATCCATCAACCCTaGCTATTCCTTTCCTTCCTG +
Preference number: 2 (lower is better)
Translates to: APSNWQVEMLVVDDGLGVGIHQP*LFLSFL
Trigger: CAGGAAGGAAAGGAATAGTCAGGGTTGATGGATGCC...TACACCTAAGCCATCATCAACCACTAACATCTCAACTTGCCAGTTGCTGGGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR CCA 90 bp TATTTTTATTTAACAGCCAGTACAGCATGCATGTTGACCAGCCAGAATGGATGTCATTGGGGCCTAGCATaGGGCATGTGGGGGCCAGCA +
Preference number: 2 (lower is better)
Translates to: YFYLTASTACMLTSQNGCHWGLA*GMWGPA
Trigger: TGCTGGCCCCCACATGCCCCATGCTAGGCCCCAATG...ACATCCATTCTGGCTGGTCAACATGCATGCTGTACTGGCTGTTAAATAAAAATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR CCA 90 bp AACAAGTCTGAGATGAATGAAACCAGACACTGGGGGCTCAAAAGACAACCCTGTTCCAGAGCCATGCCCTaGAATCTGACCCTGCCTATT +
Preference number: 2 (lower is better)
Translates to: NKSEMNETRHWGLKRQPCSRAMP*NLTLPI
Trigger: AATAGGCAGGGTCAGATTCCAGGGCATGGCTCTGGA...ACAGGGTTGTCTTTTGAGCCCCCAGTGTCTGGTTTCATTCATCTCAGACTTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR CCA 90 bp AACAAGTCTGAGATGAATGAAACCAGACACTGGGGGCTCAAAAGACAACCCTGTACAACCCTGTTCCTGTaGGAACCACAGACCAGTCAG +
Preference number: 2 (lower is better)
Translates to: NKSEMNETRHWGLKRQPCTTLFL*EPQTSQ
Trigger: CTGACTGGTCTGTGGTTCCCACAGGAACAGGGTTGT...ACAGGGTTGTCTTTTGAGCCCCCAGTGTCTGGTTTCATTCATCTCAGACTTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR CCA 90 bp CAGGCTCTGTGGAAATTACCCAGGAGTAGTCCACATGTAGAGGGAAGGCAAAGGAGTAACAGCTGGTCCTaGAGAAGAACTGGGGAATAT +
Preference number: 2 (lower is better)
Translates to: QALWKLPRSSPHVEGRQRSNSWS*RRTGEY
Trigger: ATATTCCCCAGTTCTTCTCCAGGACCAGCTGTTACT...CCTTTGCCTTCCCTCTACATGTGGACTACTCCTGGGTAATTTCCACAGAGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484418.1
ENST00000635167.1
3UTR-3UTR TCA 90 bp TTTTCTGCCAGACTCTTCGAATTCCGTCACTTTTCTTGTATAGAAAGCCCACTTTGCTCGTCCTCTGCCTaGAAGTGGTACGTCCGGTTG +
Preference number: 2 (lower is better)
Translates to: FSARLFEFRHFSCIESPLCSSSA*KWYVRL
Trigger: CAACCGGACGTACCACTTTCAGGCAGAGGACGAGCA...AAGTGGGCTTTCTATACAAGAAAAGTGACGGAATTCGAAGAGTCTGGCAGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR TCA 90 bp TCTTCCTGGCTATGTCCAGAGCTGTCTCGCCTGCTTCATTTACTGTGCCAACCAATGTTGTTCAAGTTCTaGATCAGGTTCTTGAAGAGC +
Preference number: 2 (lower is better)
Translates to: SSWLCPELSRLLHLLCQPMLFKF*IRFLKS
Trigger: GCTCTTCAAGAACCTGATTCAGAACTTGAACAACAT...TGGTTGGCACAGTAAATGAAGCAGGCGAGACAGCTCTGGACATAGCCAGGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR GCA 90 bp GGAAGGCTGTGCTGTCCCTCAAAAGGAGTGACATTCAGAATATTTTTATTTAACCCAAAGGACCACCCCTaGAGGGCCCTTGTCTTACTC +
Preference number: 2 (lower is better)
Translates to: GRLCCPSKGVTFRIFLFNPKDHP*RALVLL
Trigger: GAGTAAGACAAGGGCCCTGCAGGGGTGGTCCTTTGG...GTTAAATAAAAATATTCTGAATGTCACTCCTTTTGAGGGACAGCACAGCCTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR GCA 90 bp AACAAGTCTGAGATGAATGAAACCAGACACTGGGGGCTCAAAAGACAACCCTGTTGGCTTAGGTGTATCTaGTTTCTCATTGGGGCTGAG +
Preference number: 2 (lower is better)
Translates to: NKSEMNETRHWGLKRQPCWLRCI*FLIGAE
Trigger: CTCAGCCCCAATGAGAAAGCAGATACACCTAAGCCA...ACAGGGTTGTCTTTTGAGCCCCCAGTGTCTGGTTTCATTCATCTCAGACTTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR CAA 90 bp GAGATGTTAGTGGTTGATGATGGCTTAGGTGTATCTGCTTTCTCATaGGGGCTGAGCAATGATAGAATTTCTAGGGCTGGGAAGCAGAAC +
Preference number: 2 (lower is better)
Translates to: EMLVVDDGLGVSAFS*GLSNDRISRAGKQN
Trigger: GTTCTGCTTCCCAGCCCTAGAAATTCTATCATTGCTCAGCCCCAATGAGAAAGCAGATACACCTAAGCCATCATCAACCACTAACATCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR CCA 90 bp GTGACATTCAGAATATTTTTATTTAACAGCCAGTACAGCATGCATGTTGACCAGCCCAGCTCTGAACATTaGGGCCTAGCATGGGGCATG +
Preference number: 2 (lower is better)
Translates to: VTFRIFLFNSQYSMHVDQPSSEH*GLAWGM
Trigger: CATGCCCCATGCTAGGCCCCAATGTTCAGAGCTGGG...CTGGTCAACATGCATGCTGTACTGGCTGTTAAATAAAAATATTCTGAATGTCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR CCA 90 bp GTGACATTCAGAATATTTTTATTTAACAGCCAGTACAGCATGCATGTTGACCAGTCCTTGGTAGAGGCATaGCCTGTGGCAGGAAGAAGG +
Preference number: 2 (lower is better)
Translates to: VTFRIFLFNSQYSMHVDQSLVEA*PVAGRR
Trigger: CCTTCTTCCTGCCACAGGCCATGCCTCTACCAAGGA...CTGGTCAACATGCATGCTGTACTGGCTGTTAAATAAAAATATTCTGAATGTCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR CCA 90 bp AACAAGTCTGAGATGAATGAAACCAGACACTGGGGGCTCAAAAGACAACCCTGTCTTGTCTTACTCGTGTaGTATCTGAAGTGCCTAACA +
Preference number: 2 (lower is better)
Translates to: NKSEMNETRHWGLKRQPCLVLLV*YLKCLT
Trigger: TGTTAGGCACTTCAGATACCACACGAGTAAGACAAG...ACAGGGTTGTCTTTTGAGCCCCCAGTGTCTGGTTTCATTCATCTCAGACTTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR CCA 90 bp ATATTTTTATTTAACAGCCAGTACAGCATGCATGTTGACCAGCCAGAATGGATGTCCAGAGCCATGCCCTaGAATCTGACCCTGCCTATT +
Preference number: 2 (lower is better)
Translates to: IFLFNSQYSMHVDQPEWMSRAMP*NLTLPI
Trigger: AATAGGCAGGGTCAGATTCCAGGGCATGGCTCTGGA...CATCCATTCTGGCTGGTCAACATGCATGCTGTACTGGCTGTTAAATAAAAATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR CCA 90 bp GCACCCAGCAACTGGCAAGTTGAGATGTTAGTGGTTGATGATGGCTTAGGTGTATCTGACTCTACAATTTaGCTGGGGAATATAGGAGAA +
Preference number: 2 (lower is better)
Translates to: APSNWQVEMLVVDDGLGVSDSTI*LGNIGE
Trigger: TTCTCCTATATTCCCCAGCCAAATTGTAGAGTCAGA...TACACCTAAGCCATCATCAACCACTAACATCTCAACTTGCCAGTTGCTGGGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR TCA 90 bp GTGACATTCAGAATATTTTTATTTAACAGCCAGTACAGCATGCATGTTGACCAGAAATGTGGGTGCATCTaGCTCTACAATTTGGCTGGG +
Preference number: 2 (lower is better)
Translates to: VTFRIFLFNSQYSMHVDQKCGCI*LYNLAG
Trigger: CCCAGCCAAATTGTAGAGTCAGATGCACCCACATTT...CTGGTCAACATGCATGCTGTACTGGCTGTTAAATAAAAATATTCTGAATGTCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR CCA 90 bp TATTTTTATTTAACAGCCAGTACAGCATGCATGTTGACCAGCCAGAATGGATGTCTTGTCTTACTCGTGTaGTATCTGAAGTGCCTAACA +
Preference number: 2 (lower is better)
Translates to: YFYLTASTACMLTSQNGCLVLLV*YLKCLT
Trigger: TGTTAGGCACTTCAGATACCACACGAGTAAGACAAG...ACATCCATTCTGGCTGGTCAACATGCATGCTGTACTGGCTGTTAAATAAAAATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR CCA 72 bp GACTGCATGCGCGAAAAGCGCACGCCCAGTTCGCGGTaGACGCCCGAGCACTGGATGCAGGTGAGCACGCCC +
Preference number: 3 (lower is better)
Translates to: DCMREKRTPSSR*TPEHWMQVSTP
Trigger: GGGCGTGCTCACCTGCATCCAGTGCTCGGGCGTCCACCGCGAACTGGGCGTGCGCTTTTCGCGCATGCAGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
3UTR CCA 72 bp GGTGGTCCCGGATGTCAGGCTGGGTCTGGAGGTGCCTaGGGGCTCTCGGAGGCCCTCTTCAGAGTTGGGTGG +
Preference number: 3 (lower is better)
Translates to: GGPGCQAGSGGA*GLSEALFRVGW
Trigger: CCACCCAACTCTGAAGAGGGCCTCCGAGAGCCCCCAGGCACCTCCAGACCCAGCCTGACATCCGGGACCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR GCA 72 bp CTCTTCACCTCCGCGATGAGCAGCTTTGTGAGGTCGTaGGGCTCCCCATCATGGCCGGCGGACCCCCAGGAC +
Preference number: 3 (lower is better)
Translates to: LFTSAMSSFVRS*GSPSWPADPQD
Trigger: GTCCTGGGGGTCCGCCGGCCATGATGGGGAGCCGCACGACCTCACAAAGCTGCTCATCGCGGAGGTGAAGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
3UTR CCA 72 bp AGCCACGTGGGGTCTGCAGCCCCGCAGTCGCAGCACTaGCTATTCCCAGGCCTGCTCTTCACCTCCGCGATG +
Preference number: 3 (lower is better)
Translates to: SHVGSAAPQSQH*LFPGLLFTSAM
Trigger: CATCGCGGAGGTGAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGGGGCTGCAGACCCCACGTGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
3UTR-3UTR CAA 90 bp CCAGCGCTGGGCTCCCCGAGGAAGGCGCTGCTCAGGGCTTCGTCCTTGCTGTTCAGGGTTTGGCCTCACTaGGCACGTCAGCAGGGTCAG +
Preference number: 3 (lower is better)
Translates to: PALGSPRKALLRASSLLFRVWPH*ARQQGQ
Trigger: CTGACCCTGCTGACGTGCCAAGTGAGGCCAAACCCT...GAACAGCAAGGACGAAGCCCTGAGCAGCGCCTTCCTCGGGGAGCCCAGCGCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
3UTR GCA 72 bp AACTCGGAGGGGCCCAGCAGGTCCAAGGTGAGTGACTaGATGCGCGAAAAGCGCACGCCCAGTTCGCGGTGG +
Preference number: 3 (lower is better)
Translates to: NSEGPSRSKVSD*MREKRTPSSRW
Trigger: CCACCGCGAACTGGGCGTGCGCTTTTCGCGCATGCAGTCACTCACCTTGGACCTGCTGGGCCCCTCCGAGTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR CAA 90 bp CGTGGGGTCTGCAGCCCCGCAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTAGGGTTTGGCCTCACTaGGCACGTCAGCAGGGTCAG +
Preference number: 3 (lower is better)
Translates to: RGVCSPAVAALAIPRPALRVWPH*ARQQGQ
Trigger: CTGACCCTGCTGACGTGCCAAGTGAGGCCAAACCCT...AAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGGGGCTGCAGACCCCACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
3UTR-3UTR CAA 90 bp GCTCTTCACCTCCGCGATGAGCAGCTTTGTGAGGTCGTGCGGCTCCCCATCATGGTGAGCACGCCCAGGTaGGTGCTGAGCCACGTGGGG +
Preference number: 3 (lower is better)
Translates to: ALHLRDEQLCEVVRLPIMVSTPR*VLSHVG
Trigger: CCCCACGTGGCTCAGCACCAACCTGGGCGTGCTCAC...CATGATGGGGAGCCGCACGACCTCACAAAGCTGCTCATCGCGGAGGTGAAGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
3UTR TCA 72 bp CAACAACTCGGAGGGGCCCAGCAGGTCCAAGGTGAGTaGCTGCATGCGCGAAAAGCGCACGCCCAGTTCGCG +
Preference number: 3 (lower is better)
Translates to: QQLGGAQQVQGE*LHARKAHAQFA
Trigger: CGCGAACTGGGCGTGCGCTTTTCGCGCATGCAGTCACTCACCTTGGACCTGCTGGGCCCCTCCGAGTTGTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR CCA 72 bp CAGGCCCTGGCAGCGGCTGTCCAAAGTCCTGCCCATTaGCAAAGGCCTCCAGTACCGACAGGAGGTCCCTGT +
Preference number: 3 (lower is better)
Translates to: QALAAAVQSPAH*QRPPVPTGGPC
Trigger: ACAGGGACCTCCTGTCGGTACTGGAGGCCTTTGCCAATGGGCAGGACTTTGGACAGCCGCTGCCAGGGCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR CAA 90 bp AGCAGGTCCAAGGTGAGTGACTGCATGCGCGAAAAGCGCACGCCCAGTTCGCGGAGGGTTTGGCCTCACTaGGCACGTCAGCAGGGTCAG +
Preference number: 3 (lower is better)
Translates to: SRSKVSDCMREKRTPSSRRVWPH*ARQQGQ
Trigger: CTGACCCTGCTGACGTGCCAAGTGAGGCCAAACCCT...CCGCGAACTGGGCGTGCGCTTTTCGCGCATGCAGTCACTCACCTTGGACCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
3UTR TCA 72 bp GACACCCACGCCTCACACTCGTGCTCGTCCTCTGCCTaGAAGTGGTACGTCCGGTTGTGGGTCACCAGGTCG +
Preference number: 3 (lower is better)
Translates to: DTHASHSCSSSA*KWYVRLWVTRS
Trigger: CGACCTGGTGACCCACAACCGGACGTACCACTTTCAGGCAGAGGACGAGCACGAGTGTGAGGCGTGGGTGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
3UTR TCA 72 bp CCAGCAACAACTCGGAGGGGCCCAGCAGGTCCAAGGTaGGTGACTGCATGCGCGAAAAGCGCACGCCCAGTT +
Preference number: 3 (lower is better)
Translates to: PATTRRGPAGPR*VTACAKSARPV
Trigger: AACTGGGCGTGCGCTTTTCGCGCATGCAGTCACTCACCTTGGACCTGCTGGGCCCCTCCGAGTTGTTGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR TCA 72 bp CTCCCAGGCTGGCGACAGTCTCATAGGTCTTGTTGCTaGTGTCCAGCCTCCCACTGGCCCAGTGAGCCTGGG +
Preference number: 3 (lower is better)
Translates to: LPGWRQSHRSCC*CPASHWPSEPG
Trigger: CCCAGGCTCACTGGGCCAGTGGGAGGCTGGACATCAGCAACAAGACCTATGAGACTGTCGCCAGCCTGGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR GCA 72 bp GCTCCCCGAGGAAGGCGCTGCTCAGGGCTTCGTCCTTaGTGTTCTGCAACACTGACACCCACGCCTCACACT +
Preference number: 3 (lower is better)
Translates to: APRGRRCSGLRP*CSATLTPTPHT
Trigger: AGTGTGAGGCGTGGGTGTCAGTGTTGCAGAACAGCAAGGACGAAGCCCTGAGCAGCGCCTTCCTCGGGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
3UTR GCA 72 bp TTCTTCCGGCTCAGGTGTTCCTCTCTGCTCTCAAGCTaGAGTGTCCCTCGGAGGGAGTCCCGGAGCTGGGTC +
Preference number: 3 (lower is better)
Translates to: FFRLRCSSLLSS*SVPRRESRSWV
Trigger: GACCCAGCTCCGGGACTCCCTCCGAGGGACACTGCAGCTTGAGAGCAGAGAGGAACACCTGAGCCGGAAGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR GCA 72 bp TGTGCATCAGGCCCTGGCAGCGGCTGTCCAAAGTCCTaGCCATTGGCAAAGGCCTCCAGTACCGACAGGAGG +
Preference number: 3 (lower is better)
Translates to: CASGPGSGCPKS*PLAKASSTDRR
Trigger: CCTCCTGTCGGTACTGGAGGCCTTTGCCAATGGGCAGGACTTTGGACAGCCGCTGCCAGGGCCTGATGCACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR GCA 72 bp CAGCAGCAGCTTGAGGCAGTCGGGCTGGTTGTAGAGTaGTGCGTAGTGCAGAGCCGTGTTCCCGTCAGCAGC +
Preference number: 3 (lower is better)
Translates to: QQQLEAVGLVVE*CVVQSRVPVSS
Trigger: GCTGCTGACGGGAACACGGCTCTGCACTACGCAGCACTCTACAACCAGCCCGACTGCCTCAAGCTGCTGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
3UTR CCA 72 bp TGGCCATTGGTGCTCTCTAGTCTCCCCTGCTTGGCTTaGCCCATTCCTGCCAGGGCCCAGCACCCAGCAACT +
Preference number: 3 (lower is better)
Translates to: WPLVLSSLPCLA*PIPARAQHPAT
Trigger: AGTTGCTGGGTGCTGGGCCCTGGCAGGAATGGGCCAAGCCAAGCAGGGGAGACTAGAGAGCACCAATGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR CAA 90 bp ACCCTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCACATCTCCCCTGCTTGGCTaGGCCCATTCCTGCCAGGGC +
Preference number: 3 (lower is better)
Translates to: TLFLWEPQTSQVSRGNSTSPLLG*AHSCQG
Trigger: GCCCTGGCAGGAATGGGCCAAGCCAAGCAGGGGAGA...TGTGCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR CAA 90 bp CAAGCCCAACCCTTAAGACCAGCTTTCCACCAAAGGACCACCCCTGCAGGGCCCGAAGACAGTCCCTACTaGGCAGGGTCCCTGATCTGG +
Preference number: 3 (lower is better)
Translates to: QAQPLRPAFHQRTTPAGPEDSPY*AGSLIW
Trigger: CCAGATCAGGGACCCTGCCAAGTAGGGACTGTCTTC...GGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGCTGGTCTTAAGGGTTGGGCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR TCA 72 bp GATGGAGTGCATGTACTGAGGCCGCCAGCTTCTCGATaGAGGGGAACAGGCTCTGGGCAGCCTTCCAGCCAT +
Preference number: 3 (lower is better)
Translates to: DGVHVLRPPASR*RGTGSGQPSSH
Trigger: ATGGCTGGAAGGCTGCCCAGAGCCTGTTCCCCTTCATCGAGAAGCTGGCGGCCTCAGTACATGCACTCCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR CCA 72 bp TCCCCGGCTTTGAGCAGATACTCACACATGTGCAGCTaGAAGATGCGCCGCTCTCTCTGCATGTCCTGGGCC +
Preference number: 3 (lower is better)
Translates to: SPALSRYSHMCS*KMRRSLCMSWA
Trigger: GGCCCAGGACATGCAGAGAGAGCGGCGCATCTTCCAGCTGCACATGTGTGAGTATCTGCTCAAAGCCGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR CAA 90 bp CAGTCCCTACTTGGCAGGGTCCCTGATCTGGAAGTCAGTGATGGAGGGCTCTCCGAAGACAGTCCCTACTaGGCAGGGTCCCTGATCTGG +
Preference number: 3 (lower is better)
Translates to: QSLLGRVPDLEVSDGGLSEDSPY*AGSLIW
Trigger: CCAGATCAGGGACCCTGCCAAGTAGGGACTGTCTTC...GGAGAGCCCTCCATCACTGACTTCCAGATCAGGGACCCTGCCAAGTAGGGACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR CAA 90 bp ACAACCCTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCCAGCTGTGTTGGCCATaGGTGCTCTCTAGTCTCCCC +
Preference number: 3 (lower is better)
Translates to: TTLFLWEPQTSQVSRGNSQLCWP*VLSSLP
Trigger: GGGGAGACTAGAGAGCACCAATGGCCAACACAGCTG...GCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAGGGTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR TCA 72 bp CTGTGCCAACCAAAGCTCTCCCCTTCAGCAGCAGCTTaGGGCAGTCGGGCTGGTTGTAGAGTGCTGCGTAGT +
Preference number: 3 (lower is better)
Translates to: LCQPKLSPSAAA*GSRAGCRVLRS
Trigger: ACTACGCAGCACTCTACAACCAGCCCGACTGCCTCAAGCTGCTGCTGAAGGGGAGAGCTTTGGTTGGCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
3UTR CCA 72 bp AAGCCTGTGGACAGCTCATGGCTGTTCTGGGACAGGTaGCTGTTGCCTAAGGATTCCACGGCCTCTCGGTAC +
Preference number: 3 (lower is better)
Translates to: KPVDSSWLFWDR*LLPKDSTASRY
Trigger: GTACCGAGAGGCCGTGGAATCCTTAGGCAACAGCCACCTGTCCCAGAACAGCCATGAGCTGTCCACAGGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR CCA 72 bp GAGGCCGCCAGCTTCTCGATGAAGGGGAACAGGCTCTaGGCAGCCTTCCAGCCATCTTGGAAAAAGTTGTGC +
Preference number: 3 (lower is better)
Translates to: EAASFSMKGNRL*AAFQPSWKKLC
Trigger: GCACAACTTTTTCCAAGATGGCTGGAAGGCTGCCCAGAGCCTGTTCCCCTTCATCGAGAAGCTGGCGGCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR CCA 72 bp ACACCCTTGGACCAAAGTCCGAGAAGAGTTTTTGACTaGCAAGGGCGGGGGACAGTCCTCACTCTCGCCCTG +
Preference number: 3 (lower is better)
Translates to: TPLDQSPRRVFD*QGRGTVLTLAL
Trigger: CAGGGCGAGAGTGAGGACTGTCCCCCGCCCTTGCCAGTCAAAAACTCTTCTCGGACTTTGGTCCAAGGGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR GCA 72 bp TGGCTGTTGCCTAAGGATTCCACGGCCTCTCGGTACTaGTCTTCATTCTCCACATGGCCAAGGCCGGAGCTA +
Preference number: 3 (lower is better)
Translates to: WLLPKDSTASRY*SSFSTWPRPEL
Trigger: TAGCTCCGGCCTTGGCCATGTGGAGAATGAAGAGCAGTACCGAGAGGCCGTGGAATCCTTAGGCAACAGCCA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR GCA 72 bp TGGACAGCTCATGGCTGTTCTGGGACAGGTGGCTGTTaGCTAAGGATTCCACGGCCTCTCGGTACTGCTCTT +
Preference number: 3 (lower is better)
Translates to: WTAHGCSGTGGC*LRIPRPLGTAL
Trigger: AAGAGCAGTACCGAGAGGCCGTGGAATCCTTAGGCAACAGCCACCTGTCCCAGAACAGCCATGAGCTGTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR CAA 90 bp TGGCTATGTCCAGAGCTGTCTCGCCTGCTTCATTTACTGTGCCAACCAAAGCTCAGGGTTTGGCCTCACTaGGCACGTCAGCAGGGTCAG +
Preference number: 3 (lower is better)
Translates to: WLCPELSRLLHLLCQPKLRVWPH*ARQQGQ
Trigger: CTGACCCTGCTGACGTGCCAAGTGAGGCCAAACCCT...GAGCTTTGGTTGGCACAGTAAATGAAGCAGGCGAGACAGCTCTGGACATAGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR CAA 90 bp GCTAGTCTTGCAAAAGTTGCACAGAACTTGCTGGGAGACTCCCAGTCCTTGAGCTGGGACAGGTGGCTGTaGCCTAAGGATTCCACGGCC +
Preference number: 3 (lower is better)
Translates to: ASLAKVAQNLLGDSQSLSWDRWL*PKDSTA
Trigger: GGCCGTGGAATCCTTAGGCAACAGCCACCTGTCCCA...GCTCAAGGACTGGGAGTCTCCCAGCAAGTTCTGTGCAACTTTTGCAAGACTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR TCA 72 bp GTTGCCTTGGTGCTGGTGGATGCTATAGCCACATCCTaGGTTCTTCCGGCTCAGGTGTTCCTCTCTGCTCTC +
Preference number: 3 (lower is better)
Translates to: VALVLVDAIATS*VLPAQVFLSAL
Trigger: GAGAGCAGAGAGGAACACCTGAGCCGGAAGAACTCAGGATGTGGCTATAGCATCCACCAGCACCAAGGCAAC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR GCA 72 bp GGCAGGGAAGCCTGGTTGGCGACTTTGACAGCCAAATaGAAGACGAGTTCTTCAGGTGCCACTCTGATGGGT +
Preference number: 3 (lower is better)
Translates to: GREAWLATLTAK*KTSSSGATLMG
Trigger: ACCCATCAGAGTGGCACCTGAAGAACTCGTCTTGCATTTGGCTGTCAAAGTCGCCAACCAGGCTTCCCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484418.1
ENST00000635167.1
3UTR CCA 72 bp AAGTTTAGGAAGCCTGTGGACAGCTCATGGCTGTTCTaGGACAGGTGGCTGTTGCCTAAGGATTCCACGGCC +
Preference number: 3 (lower is better)
Translates to: KFRKPVDSSWLF*DRWLLPKDSTA
Trigger: GGCCGTGGAATCCTTAGGCAACAGCCACCTGTCCCAGAACAGCCATGAGCTGTCCACAGGCTTCCTAAACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR CAA 90 bp AGGTATAAACCAGCTGAGTCCAGAGCCATGCCCTGGAATCTGACCCTGCCTATTACCCCTGCAGGGCCCTaGTCTTACTCGTGTGGTATC +
Preference number: 3 (lower is better)
Translates to: RYKPAESRAMPWNLTLPITPAGP*SYSCGI
Trigger: GATACCACACGAGTAAGACAAGGGCCCTGCAGGGGT...AATAGGCAGGGTCAGATTCCAGGGCATGGCTCTGGACTCAGCTGGTTTATACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR CAA 90 bp CTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCACAGCCAGTACAGCATGCATGTaGACCAGCCAGAATGGATGT +
Preference number: 3 (lower is better)
Translates to: LFLWEPQTSQVSRGNSTASTACM*TSQNGC
Trigger: ACATCCATTCTGGCTGGTCAACATGCATGCTGTACT...GGCTGTGCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR CAA 90 bp TCCTGCCCATTGGCAAAGGCCTCCAGTACCGACAGGAGGTCCCTGTTGCAAATGCCATCTTGGAAAAAGTaGTGCTGGGCGTGGAAGAAC +
Preference number: 3 (lower is better)
Translates to: SCPLAKASSTDRRSLLQMPSWKK*CWAWKN
Trigger: GTTCTTCCACGCCCAGCACAACTTTTTCCAAGATGG...CATTTGCAACAGGGACCTCCTGTCGGTACTGGAGGCCTTTGCCAATGGGCAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR TCA 72 bp AATCCACCAGAGGCAGGGAAGCCTGGTTGGCGACTTTaGCAGCCAAATGCAAGACGAGTTCTTCAGGTGCCT +
Preference number: 3 (lower is better)
Translates to: NPPEAGKPGWRL*QPNARRVLQVP
Trigger: AGGCACCTGAAGAACTCGTCTTGCATTTGGCTGTCAAAGTCGCCAACCAGGCTTCCCTGCCTCTGGTGGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR TCA 72 bp AAGTTGCACAGAACTTGCTGGGAGACTCCCAGTCCTTaGGCCATCTCCTTCAGTGATGCCAACCGGCACGTT +
Preference number: 3 (lower is better)
Translates to: KLHRTCWETPSP*AISFSDANRHV
Trigger: AACGTGCCGGTTGGCATCACTGAAGGAGATGGCTCAAGGACTGGGAGTCTCCCAGCAAGTTCTGTGCAACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000492982.6
ENST00000618240.4
ENST00000634705.1
ENST00000635693.1
3UTR TCA 72 bp AATCCACCAGAGGCAGGGAAGCCTGGTTGGCGACTTTaGCAGCCAAATGCAAGACGAGTTCTTCAGGTGCCA +
Preference number: 3 (lower is better)
Translates to: NPPEAGKPGWRL*QPNARRVLQVP
Trigger: TGGCACCTGAAGAACTCGTCTTGCATTTGGCTGTCAAAGTCGCCAACCAGGCTTCCCTGCCTCTGGTGGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484418.1
ENST00000635167.1
3UTR GCA 72 bp ACCCTTAAGACCAGCTTTCCACCAAAGGACCACCCCTaGAGGGCCCTTGTCTTACTCGTGTGGTATCTGAAG +
Preference number: 3 (lower is better)
Translates to: TLKTSFPPKDHP*RALVLLVWYLK
Trigger: CTTCAGATACCACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGCTGGTCTTAAGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR GCA 72 bp TGTCCAGAGTCGCTGAGGCTCAGGTGTGCACCGGCGTaGAAACCTATGCTCCACATACTTGGCCATAATGTA +
Preference number: 3 (lower is better)
Translates to: CPESLRLRCAPA*KPMLHILGHNV
Trigger: TACATTATGGCCAAGTATGTGGAGCATAGGTTTGCACGCCGGTGCACACCTGAGCCTCAGCGACTCTGGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR CCA 72 bp TTGGCCCATTCCTGCCAGGGCCCAGCACCCAGCAACTaGCAAGTTGAGATGTTAGTGGTTGATGATGGCTTA +
Preference number: 3 (lower is better)
Translates to: LAHSCQGPAPSN*QVEMLVVDDGL
Trigger: TAAGCCATCATCAACCACTAACATCTCAACTTGCCAGTTGCTGGGTGCTGGGCCCTGGCAGGAATGGGCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR CAA 90 bp ACAACCCTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCAGTACAGCATGCATGTaGACCAGCCAGAATGGATGT +
Preference number: 3 (lower is better)
Translates to: TTLFLWEPQTSQVSRGNSSTACM*TSQNGC
Trigger: ACATCCATTCTGGCTGGTCAACATGCATGCTGTACT...GCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAGGGTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR CAA 90 bp ATGACCTCATTGAAGCTCGTGTTTCCCATGTTCAAGGCCAGCAACAACTCGGAGTCCGTCCCAAACTGCTaGTTGCCTTGGTGCTGGTGG +
Preference number: 3 (lower is better)
Translates to: MTSLKLVFPMFKASNNSESVPNC*LPWCWW
Trigger: CCACCAGCACCAAGGCAACAAGCAGTTTGGGACGGA...CTCCGAGTTGTTGCTGGCCTTGAACATGGGAAACACGAGCTTCAATGAGGTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR TCA 72 bp AAGTTGTGCTGGGCGTGGAAGAACTTGATGAGGCTCTaGAGGAAGTCAGGACCTTGCTTCATCTGGCTCTCC +
Preference number: 3 (lower is better)
Translates to: KLCWAWKNLMRL*RKSGPCFIWLS
Trigger: GGAGAGCCAGATGAAGCAAGGTCCTGACTTCCTTCAGAGCCTCATCAAGTTCTTCCACGCCCAGCACAACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR CCA 72 bp TATAGGTATAAACCAGCTGAGTCCAGAGCCATGCCCTaGAATCTGACCCTGCCTATTCCCAAGCCCAACCCT +
Preference number: 3 (lower is better)
Translates to: YRYKPAESRAMP*NLTLPIPKPNP
Trigger: AGGGTTGGGCTTGGGAATAGGCAGGGTCAGATTCCAGGGCATGGCTCTGGACTCAGCTGGTTTATACCTATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR CCA 72 bp CTTCCTCATCCTCCTCACTGTCAGAGCCAGGCTCTGTaGAAATTACCCAGGAGTAGTCCACATGTAGAGGGA +
Preference number: 3 (lower is better)
Translates to: LPHPPHCQSQAL*KLPRSSPHVEG
Trigger: TCCCTCTACATGTGGACTACTCCTGGGTAATTTCCACAGAGCCTGGCTCTGACAGTGAGGAGGATGAGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
3UTR-3UTR CAA 90 bp TCTGACTCTACAATTTGGCTGGGGAATATAGGAGAATGCCTAGGGAAGGCTGTGACCCCTGCAGGGCCCTaGTCTTACTCGTGTGGTATC +
Preference number: 3 (lower is better)
Translates to: SDSTIWLGNIGECLGKAVTPAGP*SYSCGI
Trigger: GATACCACACGAGTAAGACAAGGGCCCTGCAGGGGT...CACAGCCTTCCCTAGGCATTCTCCTATATTCCCCAGCCAAATTGTAGAGTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR CAA 90 bp TCTTTCCTTCTGCCATCCAGAGGCCTGAGGGACAGGGCTGGGACCCACCTTCTCATTCCGTCACTTTTCTaGTATAGAAAGCCCACTTTC +
Preference number: 3 (lower is better)
Translates to: SFLLPSRGLRDRAGTHLLIPSLF*YRKPTF
Trigger: GAAAGTGGGCTTTCTATACAAGAAAAGTGACGGAAT...GAGAAGGTGGGTCCCAGCCCTGTCCCTCAGGCCTCTGGATGGCAGAAGGAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR CAA 90 bp AACAAGTCTGAGATGAATGAAACCAGACACTGGGGGCTCAAAAGACAACCCTGTCAGCTGTGTTGGCCATaGGTGCTCTCTAGTCTCCCC +
Preference number: 3 (lower is better)
Translates to: NKSEMNETRHWGLKRQPCQLCWP*VLSSLP
Trigger: GGGGAGACTAGAGAGCACCAATGGCCAACACAGCTG...ACAGGGTTGTCTTTTGAGCCCCCAGTGTCTGGTTTCATTCATCTCAGACTTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR GCA 72 bp ATAGAAAGCCCACTTTCTCCGTCCCAAACTGCTTGTTaGCTTGGTGCTGGTGGATGCTATAGCCACATCCTG +
Preference number: 3 (lower is better)
Translates to: IESPLSPSQTAC*LGAGGCYSHIL
Trigger: CAGGATGTGGCTATAGCATCCACCAGCACCAAGGCAACAAGCAGTTTGGGACGGAGAAAGTGGGCTTTCTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR CCA 72 bp TTCTGGATGATGAAATCCACCAGAGGCAGGGAAGCCTaGTTGGCGACTTTGACAGCCAAATGCAAGACGAGT +
Preference number: 3 (lower is better)
Translates to: FWMMKSTRGREA*LATLTAKCKTS
Trigger: ACTCGTCTTGCATTTGGCTGTCAAAGTCGCCAACCAGGCTTCCCTGCCTCTGGTGGATTTCATCATCCAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
3UTR GCA 72 bp GCTGGAGACTTCAGAACGATCTCCACTGGCATGTCTTaGACACCCTTGGACCAAAGTCCGAGAAGAGTTTTT +
Preference number: 3 (lower is better)
Translates to: AGDFRTISTGMS*TPLDQSPRRVF
Trigger: AAAAACTCTTCTCGGACTTTGGTCCAAGGGTGTGCAAGACATGCCAGTGGAGATCGTTCTGAAGTCTCCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR GCA 72 bp TCTGACTCTACAATTTGGCTGGGGAATATAGGAGAATaGCTAGGGAAGGCTGTGCTGTCCCTCAAAAGGAGT +
Preference number: 3 (lower is better)
Translates to: SDSTIWLGNIGE*LGKAVLSLKRS
Trigger: ACTCCTTTTGAGGGACAGCACAGCCTTCCCTAGGCATTCTCCTATATTCCCCAGCCAAATTGTAGAGTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR CCA 72 bp ACACAGGCAAATGTGGGTGCATCTGACTCTACAATTTaGCTGGGGAATATAGGAGAATGCCTAGGGAAGGCT +
Preference number: 3 (lower is better)
Translates to: TQANVGASDSTI*LGNIGECLGKA
Trigger: AGCCTTCCCTAGGCATTCTCCTATATTCCCCAGCCAAATTGTAGAGTCAGATGCACCCACATTTGCCTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR CAA 90 bp GGAAGGCTGTGCTGTCCCTCAAAAGGAGTGACATTCAGAATATTTTTATTTAACACCCCTGCAGGGCCCTaGTCTTACTCGTGTGGTATC +
Preference number: 3 (lower is better)
Translates to: GRLCCPSKGVTFRIFLFNTPAGP*SYSCGI
Trigger: GATACCACACGAGTAAGACAAGGGCCCTGCAGGGGT...GTTAAATAAAAATATTCTGAATGTCACTCCTTTTGAGGGACAGCACAGCCTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR CAA 90 bp CAGGCAAATGTGGGTGCATCTGACTCTACAATTTGGCTGGGGAATATAGGAGAAAGTACAGCATGCATGTaGACCAGCCAGAATGGATGT +
Preference number: 3 (lower is better)
Translates to: QANVGASDSTIWLGNIGESTACM*TSQNGC
Trigger: ACATCCATTCTGGCTGGTCAACATGCATGCTGTACT...TTCTCCTATATTCCCCAGCCAAATTGTAGAGTCAGATGCACCCACATTTGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR GCA 72 bp GTCAGGCAGCCATACTTGACTCCACACTTCCTTTTCTaGCAGACTCTTCGAATTCCGTCACTTTTCTTGTAT +
Preference number: 3 (lower is better)
Translates to: VRQPYLTPHFLF*QTLRIPSLFLY
Trigger: ATACAAGAAAAGTGACGGAATTCGAAGAGTCTGGCAGAAAAGGAAGTGTGGAGTCAAGTATGGCTGCCTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR TCA 72 bp CAGTACAGCATGCATGTTGACCAGCCAGAATGGATGTaGTCTGTAGACAATTGTAATGGTCATATAGGTATA +
Preference number: 3 (lower is better)
Translates to: QYSMHVDQPEWM*SVDNCNGHIGI
Trigger: TATACCTATATGACCATTACAATTGTCTACAGATCACATCCATTCTGGCTGGTCAACATGCATGCTGTACTG
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp GCGCACGCCCAGTTCGCGGTGGACGCCCGAGCACTGGATGCAGGTGAGCACGCCTGGACGCCCGAGCACTaGATGCAGGTGAGCACGCCC +
Preference number: 4 (lower is better)
Translates to: AHAQFAVDARALDAGEHAWTPEH*MQVSTP
Trigger: GGGCGTGCTCACCTGCATCCAGTGCTCGGGCGTCCA...GGCGTGCTCACCTGCATCCAGTGCTCGGGCGTCCACCGCGAACTGGGCGTGCGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR TCA 90 bp GCGCACGCCCAGTTCGCGGTGGACGCCCGAGCACTGGATGCAGGTGAGCACGCCCCGCCAGCTTCTCGATaGAGGGGAACAGGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: AHAQFAVDARALDAGEHAPPASR*RGTGSG
Trigger: CCCAGAGCCTGTTCCCCTTCATCGAGAAGCTGGCGG...GGCGTGCTCACCTGCATCCAGTGCTCGGGCGTCCACCGCGAACTGGGCGTGCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR CCA 90 bp CGTGGGGTCTGCAGCCCCGCAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTTGCGGCTCCCCATCATaGCCGGCGGACCCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: RGVCSPAVAALAIPRPALCGSPS*PADPQD
Trigger: GTCCTGGGGGTCCGCCGGCCATGATGGGGAGCCGCA...AAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGGGGCTGCAGACCCCACG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR CCA 90 bp GCCTCCCACTGGCCCAGTGAGCCTGGGCCGGGAGCTTCAGCAAGCAGCGCTTCTGCAAAGGTCCCCGCCTaGGCCTGCTCCAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: ASHWPSEPGPGASASSASAKVPA*ACSSSS
Trigger: GGAGCTGCTGGAGCAGGCCCAGGCGGGGACCTTTGC...AGAAGCGCTGCTTGCTGAAGCTCCCGGCCCAGGCTCACTGGGCCAGTGGGAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484418.1
ENST00000635167.1
CDS-3UTR TCA 90 bp ATGAGCAGCTTTGTGAGGTCGTGCGGCTCCCCATCATGGCCGGCGGACCCCCAGGGAACTCGGCGACGCTaGACTGCTCCGGCATGGCGG +
Preference number: 4 (lower is better)
Translates to: MSSFVRSCGSPSWPADPQGTRRR*TAPAWR
Trigger: CCGCCATGCCGGAGCAGTTCAGCGTCGCCGAGTTCC...CTGGGGGTCCGCCGGCCATGATGGGGAGCCGCACGACCTCACAAAGCTGCTCAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR GCA 90 bp AGGCCTGCTCTTCACCTCCGCGATGAGCAGCTTTGTGAGGTCGTGCGGCTCCCCTCGGCGACGCTGAACTaGTCCGGCATGGCGGGCGCG +
Preference number: 4 (lower is better)
Translates to: RPALHLRDEQLCEVVRLPSATLN*SGMAGA
Trigger: CGCGCCCGCCATGCCGGAGCAGTTCAGCGTCGCCGA...GGGGAGCCGCACGACCTCACAAAGCTGCTCATCGCGGAGGTGAAGAGCAGGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR GCA 90 bp GCGATGAGCAGCTTTGTGAGGTCGTGCGGCTCCCCATCATGGCCGGCGGACCCCCCCCGAGGAAGGCGCTaGTCAGGGCTTCGTCCTTGC +
Preference number: 4 (lower is better)
Translates to: AMSSFVRSCGSPSWPADPPRGRR*SGLRPC
Trigger: GCAAGGACGAAGCCCTGAGCAGCGCCTTCCTCGGGG...GGGGTCCGCCGGCCATGATGGGGAGCCGCACGACCTCACAAAGCTGCTCATCGC
68% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR GCA 90 bp CGTGGGGTCTGCAGCCCCGCAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTGAGCCACGTGGGGTCTaGAGCCCCGCAGTCGCAGCA +
Preference number: 4 (lower is better)
Translates to: RGVCSPAVAALAIPRPALEPRGV*SPAVAA
Trigger: TGCTGCGACTGCGGGGCTGCAGACCCCACGTGGCTC...AAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGGGGCTGCAGACCCCACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR GCA 90 bp TGCAGCCCCGCAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCACCTCCGCGCCCTGAGGGGTGGCTaGTCCCAGGCTGGCGACAGT +
Preference number: 4 (lower is better)
Translates to: CSPAVAALAIPRPALHLRALRGG*SQAGDS
Trigger: ACTGTCGCCAGCCTGGGAGCAGCCACCCCTCAGGGC...GCGGAGGTGAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGGGGCTGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR GCA 90 bp AGGCCTGCTCTTCACCTCCGCGATGAGCAGCTTTGTGAGGTCGTGCGGCTCCCCGGCTGGGTCTGGAGGTaGCTGGGGGCTCTCGGAGGC +
Preference number: 4 (lower is better)
Translates to: RPALHLRDEQLCEVVRLPGWVWR*LGALGG
Trigger: GCCTCCGAGAGCCCCCAGGCACCTCCAGACCCAGCC...GGGGAGCCGCACGACCTCACAAAGCTGCTCATCGCGGAGGTGAAGAGCAGGCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR GCA 90 bp CCCGCAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCACCTCCGCGATGAGGGCTGGGTCTGGAGGTaGCTGGGGGCTCTCGGAGGC +
Preference number: 4 (lower is better)
Translates to: PAVAALAIPRPALHLRDEGWVWR*LGALGG
Trigger: GCCTCCGAGAGCCCCCAGGCACCTCCAGACCCAGCC...CTCATCGCGGAGGTGAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp GAGCAGCTTTGTGAGGTCGTGCGGCTCCCCATCATGGCCGGCGGACCCCCAGGAACGCCCAGTTCGCGGTaGACGCCCGAGCACTGGATG +
Preference number: 4 (lower is better)
Translates to: EQLCEVVRLPIMAGGPPGTPSSR*TPEHWM
Trigger: CATCCAGTGCTCGGGCGTCCACCGCGAACTGGGCGT...TCCTGGGGGTCCGCCGGCCATGATGGGGAGCCGCACGACCTCACAAAGCTGCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR CCA 90 bp CGTGGGGTCTGCAGCCCCGCAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTTGTCCAGCCTCCCACTaGCCCAGTGAGCCTGGGCCG +
Preference number: 4 (lower is better)
Translates to: RGVCSPAVAALAIPRPALCPASH*PSEPGP
Trigger: CGGCCCAGGCTCACTGGGCCAGTGGGAGGCTGGACA...AAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGGGGCTGCAGACCCCACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp TGCAGCCCCGCAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCACCTCCGCTGTCCAGCCTCCCACTaGCCCAGTGAGCCTGGGCCG +
Preference number: 4 (lower is better)
Translates to: CSPAVAALAIPRPALHLRCPASH*PSEPGP
Trigger: CGGCCCAGGCTCACTGGGCCAGTGGGAGGCTGGACA...GCGGAGGTGAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGGGGCTGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR TCA 90 bp CGTGGGGTCTGCAGCCCCGCAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTGCTGTCCAGAGTCGCTaGGGCTCAGGTGTGCACCGG +
Preference number: 4 (lower is better)
Translates to: RGVCSPAVAALAIPRPALAVQSR*GSGVHR
Trigger: CCGGTGCACACCTGAGCCTCAGCGACTCTGGACAGC...AAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGGGGCTGCAGACCCCACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR GCA 90 bp GCGCGAAAAGCGCACGCCCAGTTCGCGGTGGACGCCCGAGCACTGGATGCAGGTATGCGCCGCTCTCTCTaGATGTCCTGGGCCACCTCC +
Preference number: 4 (lower is better)
Translates to: ARKAHAQFAVDARALDAGMRRSL*MSWATS
Trigger: GGAGGTGGCCCAGGACATGCAGAGAGAGCGGCGCAT...ACCTGCATCCAGTGCTCGGGCGTCCACCGCGAACTGGGCGTGCGCTTTTCGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR GCA 90 bp CACCTCCGCGATGAGCAGCTTTGTGAGGTCGTGCGGCTCCCCATCATGGCCGGCCCCCGAGGAAGGCGCTaGTCAGGGCTTCGTCCTTGC +
Preference number: 4 (lower is better)
Translates to: HLRDEQLCEVVRLPIMAGPRGRR*SGLRPC
Trigger: GCAAGGACGAAGCCCTGAGCAGCGCCTTCCTCGGGG...GCCGGCCATGATGGGGAGCCGCACGACCTCACAAAGCTGCTCATCGCGGAGGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR GCA 90 bp TGGGGTCTGCAGCCCCGCAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCAGAGCCACGTGGGGTCTaGAGCCCCGCAGTCGCAGCA +
Preference number: 4 (lower is better)
Translates to: WGLQPRSRSTGYSQACSSEPRGV*SPAVAA
Trigger: TGCTGCGACTGCGGGGCTGCAGACCCCACGTGGCTC...TGAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGGGGCTGCAGACCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR GCA 90 bp GGCCTGCTCTTCACCTCCGCGATGAGCAGCTTTGTGAGGTCGTGCGGCTCCCCAGTCCCCGCCTGGGCCTaGTCCAGCAGCTCCTCACAC +
Preference number: 4 (lower is better)
Translates to: GLLFTSAMSSFVRSCGSPVPAWA*SSSSSH
Trigger: GTGTGAGGAGCTGCTGGAGCAGGCCCAGGCGGGGAC...TGGGGAGCCGCACGACCTCACAAAGCTGCTCATCGCGGAGGTGAAGAGCAGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp GCGATGAGCAGCTTTGTGAGGTCGTGCGGCTCCCCATCATGGCCGGCGGACCCCCCGCAGTCGCAGCACTaGCTATTCCCAGGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: AMSSFVRSCGSPSWPADPPQSQH*LFPGLL
Trigger: GAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGG...GGGGTCCGCCGGCCATGATGGGGAGCCGCACGACCTCACAAAGCTGCTCATCGC
67% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR CCA 90 bp ATGAGCAGCTTTGTGAGGTCGTGCGGCTCCCCATCATGGCCGGCGGACCCCCAGTGGACGCCCGAGCACTaGATGCAGGTGAGCACGCCC +
Preference number: 4 (lower is better)
Translates to: MSSFVRSCGSPSWPADPQWTPEH*MQVSTP
Trigger: GGGCGTGCTCACCTGCATCCAGTGCTCGGGCGTCCA...CTGGGGGTCCGCCGGCCATGATGGGGAGCCGCACGACCTCACAAAGCTGCTCAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR CCA 90 bp GTGGGGTCTGCAGCCCCGCAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCTGGACGCCCGAGCACTaGATGCAGGTGAGCACGCCC +
Preference number: 4 (lower is better)
Translates to: VGSAAPQSQHWLFPGLLFWTPEH*MQVSTP
Trigger: GGGCGTGCTCACCTGCATCCAGTGCTCGGGCGTCCA...GAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGGGGCTGCAGACCCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR TCA 90 bp CTGCAGCCCCGCAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCACCTCCGCCGCCAGCTTCTCGATaGAGGGGAACAGGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: LQPRSRSTGYSQACSSPPPPASR*RGTGSG
Trigger: CCCAGAGCCTGTTCCCCTTCATCGAGAAGCTGGCGG...CGGAGGTGAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGGGGCTGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR TCA 90 bp CATGTAGAGGGAAGGCAAAGGTCCCCGCCTGGGCCTGCTCCAGCAGCTCCTCACGCTGTCCAGAGTCGCTaGGGCTCAGGTGTGCACCGG +
Preference number: 4 (lower is better)
Translates to: HVEGRQRSPPGPAPAAPHAVQSR*GSGVHR
Trigger: CCGGTGCACACCTGAGCCTCAGCGACTCTGGACAGC...GTGAGGAGCTGCTGGAGCAGGCCCAGGCGGGGACCTTTGCCTTCCCTCTACATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
CDS-3UTR TCA 90 bp TCCAGCCACAGGGCTCCCAGGCCCCTAGCGGGTAATGAGATAGGAAAGAACCGCCTCCCACTGGCCCAGTaGGCCTGGGCCGGGAGCTTC +
Preference number: 4 (lower is better)
Translates to: SSHRAPRPLAGNEIGKNRLPLAQ*AWAGSF
Trigger: GAAGCTCCCGGCCCAGGCTCACTGGGCCAGTGGGAG...GCGGTTCTTTCCTATCTCATTACCCGCTAGGGGCCTGGGAGCCCTGTGGCTGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
ENST00000635461.1
CDS-3UTR TCA 90 bp GCTCTTCACCTCCGCGATGAGCAGCTTTGTGAGGTCGTGCGGCTCCCCATCATGCTCCCACTGGCCCAGTaGGCCTGGGCCGGGAGCTTC +
Preference number: 4 (lower is better)
Translates to: ALHLRDEQLCEVVRLPIMLPLAQ*AWAGSF
Trigger: GAAGCTCCCGGCCCAGGCTCACTGGGCCAGTGGGAG...CATGATGGGGAGCCGCACGACCTCACAAAGCTGCTCATCGCGGAGGTGAAGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR TCA 90 bp CACCTCCGCGATGAGCAGCTTTGTGAGGTCGTGCGGCTCCCCATCATGGCCGGCCAGAGGCTGCCTGGCTaGGGGACCATCTTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: HLRDEQLCEVVRLPIMAGQRLPG*GTIFRA
Trigger: AGCCCTGAAGATGGTCCCTCAGCCAGGCAGCCTCTG...GCCGGCCATGATGGGGAGCCGCACGACCTCACAAAGCTGCTCATCGCGGAGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR GCA 90 bp GCGCACGCCCAGTTCGCGGTGGACGCCCGAGCACTGGATGCAGGTGAGCACGCCAGGAAGTCAGGACCTTaGTTCATCTGGCTCTCCCCG +
Preference number: 4 (lower is better)
Translates to: AHAQFAVDARALDAGEHARKSGP*FIWLSP
Trigger: CGGGGAGAGCCAGATGAAGCAAGGTCCTGACTTCCT...GGCGTGCTCACCTGCATCCAGTGCTCGGGCGTCCACCGCGAACTGGGCGTGCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR GCA 90 bp GCGCACGCCCAGTTCGCGGTGGACGCCCGAGCACTGGATGCAGGTGAGCACGCCTCGTCCTTGCTGTTCTaGAACACTGACACCCACGCC +
Preference number: 4 (lower is better)
Translates to: AHAQFAVDARALDAGEHASSLLF*NTDTHA
Trigger: GGCGTGGGTGTCAGTGTTGCAGAACAGCAAGGACGA...GGCGTGCTCACCTGCATCCAGTGCTCGGGCGTCCACCGCGAACTGGGCGTGCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR GCA 90 bp TTCCCAGGCCTGCTCTTCACCTCCGCGATGAGCAGCTTTGTGAGGTCGTGCGGCGAGCCACGTGGGGTCTaGAGCCCCGCAGTCGCAGCA +
Preference number: 4 (lower is better)
Translates to: FPGLLFTSAMSSFVRSCGEPRGV*SPAVAA
Trigger: TGCTGCGACTGCGGGGCTGCAGACCCCACGTGGCTC...GCCGCACGACCTCACAAAGCTGCTCATCGCGGAGGTGAAGAGCAGGCCTGGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR GCA 90 bp CAAGCCCAACCCTTAAGACCAGCTTTCCACCAAAGGACCACCCCTGCAGGGCCCGGCTGGGTCTGGAGGTaGCTGGGGGCTCTCGGAGGC +
Preference number: 4 (lower is better)
Translates to: QAQPLRPAFHQRTTPAGPGWVWR*LGALGG
Trigger: GCCTCCGAGAGCCCCCAGGCACCTCCAGACCCAGCC...GGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGCTGGTCTTAAGGGTTGGGCTTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp AGGGTCCCTGATCTGGAAGTCAGTGATGGAGGGCTCTCCTGCCCTTGTGAAGCCGGTACCGGGGCATCTTaGCGGCGAAGGCGGCGGCCC +
Preference number: 4 (lower is better)
Translates to: RVPDLEVSDGGLSCPCEAGTGAS*RRRRRP
Trigger: GGGCCGCCGCCTTCGCCGCCAAGATGCCCCGGTACC...GGCTTCACAAGGGCAGGAGAGCCCTCCATCACTGACTTCCAGATCAGGGACCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000618240.4
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp GCTCTTCACCTCCGCGATGAGCAGCTTTGTGAGGTCGTGCGGCTCCCCATCATGTGCGGCTCCCCATCATaGCCGGCGGACCCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: ALHLRDEQLCEVVRLPIMCGSPS*PADPQD
Trigger: GTCCTGGGGGTCCGCCGGCCATGATGGGGAGCCGCA...CATGATGGGGAGCCGCACGACCTCACAAAGCTGCTCATCGCGGAGGTGAAGAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR CCA 90 bp TGGGGTCTGCAGCCCCGCAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCAACGCCCAGTTCGCGGTaGACGCCCGAGCACTGGATG +
Preference number: 4 (lower is better)
Translates to: WGLQPRSRSTGYSQACSSTPSSR*TPEHWM
Trigger: CATCCAGTGCTCGGGCGTCCACCGCGAACTGGGCGT...TGAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGGGGCTGCAGACCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR CCA 90 bp GCGCGAAAAGCGCACGCCCAGTTCGCGGTGGACGCCCGAGCACTGGATGCAGGTGGCCCTCTTCAGAGTTaGGTGGGGCTTGGCTGGGAT +
Preference number: 4 (lower is better)
Translates to: ARKAHAQFAVDARALDAGGPLQS*VGLGWD
Trigger: ATCCCAGCCAAGCCCCACCCAACTCTGAAGAGGGCC...ACCTGCATCCAGTGCTCGGGCGTCCACCGCGAACTGGGCGTGCGCTTTTCGCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR TCA 90 bp CCCGCAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCACCTCCGCGATGAGCCGCCAGCTTCTCGATaGAGGGGAACAGGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: PAVAALAIPRPALHLRDEPPASR*RGTGSG
Trigger: CCCAGAGCCTGTTCCCCTTCATCGAGAAGCTGGCGG...CTCATCGCGGAGGTGAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR TCA 90 bp GCGCGAAAAGCGCACGCCCAGTTCGCGGTGGACGCCCGAGCACTGGATGCAGGTTGCTCGTCCTCTGCCTaGAAGTGGTACGTCCGGTTG +
Preference number: 4 (lower is better)
Translates to: ARKAHAQFAVDARALDAGCSSSA*KWYVRL
Trigger: CAACCGGACGTACCACTTTCAGGCAGAGGACGAGCA...ACCTGCATCCAGTGCTCGGGCGTCCACCGCGAACTGGGCGTGCGCTTTTCGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR TCA 90 bp GCCTCCCACTGGCCCAGTGAGCCTGGGCCGGGAGCTTCAGCAAGCAGCGCTTCTCAGGTCCAAGGTGAGTaGCTGCATGCGCGAAAAGCG +
Preference number: 4 (lower is better)
Translates to: ASHWPSEPGPGASASSASQVQGE*LHARKA
Trigger: CGCTTTTCGCGCATGCAGTCACTCACCTTGGACCTG...AGAAGCGCTGCTTGCTGAAGCTCCCGGCCCAGGCTCACTGGGCCAGTGGGAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484418.1
ENST00000635167.1
CDS-3UTR TCA 90 bp CCAGCGCTGGGCTCCCCGAGGAAGGCGCTGCTCAGGGCTTCGTCCTTGCTGTTCCAGGTCCAAGGTGAGTaGCTGCATGCGCGAAAAGCG +
Preference number: 4 (lower is better)
Translates to: PALGSPRKALLRASSLLFQVQGE*LHARKA
Trigger: CGCTTTTCGCGCATGCAGTCACTCACCTTGGACCTG...GAACAGCAAGGACGAAGCCCTGAGCAGCGCCTTCCTCGGGGAGCCCAGCGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR TCA 90 bp CCTCCCACTGGCCCAGTGAGCCTGGGCCGGGAGCTTCAGCAAGCAGCGCTTCTCCCAGCAGGTCCAAGGTaGGTGACTGCATGCGCGAAA +
Preference number: 4 (lower is better)
Translates to: PPTGPVSLGRELQQAALLPAGPR*VTACAK
Trigger: TTTCGCGCATGCAGTCACTCACCTTGGACCTGCTGG...GAGAAGCGCTGCTTGCTGAAGCTCCCGGCCCAGGCTCACTGGGCCAGTGGGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484418.1
ENST00000635167.1
CDS-3UTR GCA 90 bp GAGGGACTGAGAGTTCTGCAGCTGAAGCCAGCTCAGGAGCACTCAGATCCAGCCTCGGCGACGCTGAACTaGTCCGGCATGGCGGGCGCG +
Preference number: 4 (lower is better)
Translates to: EGLRVLQLKPAQEHSDPASATLN*SGMAGA
Trigger: CGCGCCCGCCATGCCGGAGCAGTTCAGCGTCGCCGA...GGCTGGATCTGAGTGCTCCTGAGCTGGCTTCAGCTGCAGAACTCTCAGTCCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000618240.4
ENST00000634561.2
ENST00000635693.1
CDS-3UTR GCA 90 bp GCGCGAAAAGCGCACGCCCAGTTCGCGGTGGACGCCCGAGCACTGGATGCAGGTCTCGTGCTCGTCCTCTaGCTGAAAGTGGTACGTCCG +
Preference number: 4 (lower is better)
Translates to: ARKAHAQFAVDARALDAGLVLVL*LKVVRP
Trigger: CGGACGTACCACTTTCAGGCAGAGGACGAGCACGAG...ACCTGCATCCAGTGCTCGGGCGTCCACCGCGAACTGGGCGTGCGCTTTTCGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR GCA 90 bp GTGGGGTCTGCAGCCCCGCAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCAGCTTTGTGAGGTCGTaGGGCTCCCCATCATGGCCG +
Preference number: 4 (lower is better)
Translates to: VGSAAPQSQHWLFPGLLFSFVRS*GSPSWP
Trigger: CGGCCATGATGGGGAGCCGCACGACCTCACAAAGCT...GAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGGGGCTGCAGACCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR GCA 90 bp CCTCCCACTGGCCCAGTGAGCCTGGGCCGGGAGCTTCAGCAAGCAGCGCTTCTCTGTAGTCCCTGCGGGTaGCCATGTCACTCTCAGCTG +
Preference number: 4 (lower is better)
Translates to: PPTGPVSLGRELQQAALLCSPCG*PCHSQL
Trigger: CAGCTGAGAGTGACATGGGCACCCGCAGGGACTACA...GAGAAGCGCTGCTTGCTGAAGCTCCCGGCCCAGGCTCACTGGGCCAGTGGGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484418.1
ENST00000635167.1
CDS-3UTR GCA 90 bp GCGCGAAAAGCGCACGCCCAGTTCGCGGTGGACGCCCGAGCACTGGATGCAGGTGGGCTGGTTGTAGAGTaGTGCGTAGTGCAGAGCCGT +
Preference number: 4 (lower is better)
Translates to: ARKAHAQFAVDARALDAGGLVVE*CVVQSR
Trigger: ACGGCTCTGCACTACGCAGCACTCTACAACCAGCCC...ACCTGCATCCAGTGCTCGGGCGTCCACCGCGAACTGGGCGTGCGCTTTTCGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR GCA 90 bp GAGGGACTGAGAGTTCTGCAGCTGAAGCCAGCTCAGGAGCACTCAGATCCAGCCGGCTGGGTCTGGAGGTaGCTGGGGGCTCTCGGAGGC +
Preference number: 4 (lower is better)
Translates to: EGLRVLQLKPAQEHSDPAGWVWR*LGALGG
Trigger: GCCTCCGAGAGCCCCCAGGCACCTCCAGACCCAGCC...GGCTGGATCTGAGTGCTCCTGAGCTGGCTTCAGCTGCAGAACTCTCAGTCCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635461.1
ENST00000635693.1
CDS-3UTR GCA 90 bp CCAGCTTTCCACCAAAGGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGGTGGCTGGGTCTGGAGGTaGCTGGGGGCTCTCGGAGGC +
Preference number: 4 (lower is better)
Translates to: PAFHQRTTPAGPLSYSCGGWVWR*LGALGG
Trigger: GCCTCCGAGAGCCCCCAGGCACCTCCAGACCCAGCC...ACCACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR GCA 90 bp CATGTAGAGGGAAGGCAAAGGTCCCCGCCTGGGCCTGCTCCAGCAGCTCCTCACAGGGGTTCTCACCTGTaGATCAGGCCCTGGCAGCGG +
Preference number: 4 (lower is better)
Translates to: HVEGRQRSPPGPAPAAPHRGSHL*IRPWQR
Trigger: CCGCTGCCAGGGCCTGATGCACAGGTGAGAACCCCT...GTGAGGAGCTGCTGGAGCAGGCCCAGGCGGGGACCTTTGCCTTCCCTCTACATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484418.1
ENST00000635167.1
CDS-3UTR CCA 90 bp ACCGCCATCAGTCCTAACAGGGAAAGGCCATGTGTCCTTGGTAGAGGCATGGCCGGTACCGGGGCATCTTaGCGGCGAAGGCGGCGGCCC +
Preference number: 4 (lower is better)
Translates to: TAISPNRERPCVLGRGMAGTGAS*RRRRRP
Trigger: GGGCCGCCGCCTTCGCCGCCAAGATGCCCCGGTACC...GGCCATGCCTCTACCAAGGACACATGGCCTTTCCCTGTTAGGACTGATGGCGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000618240.4
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp GGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGGTATCTGAAGTGCCTAACGGTACCGGGGCATCTTaGCGGCGAAGGCGGCGGCCC +
Preference number: 4 (lower is better)
Translates to: GPPLQGPCLTRVVSEVPNGTGAS*RRRRRP
Trigger: GGGCCGCCGCCTTCGCCGCCAAGATGCCCCGGTACC...GTTAGGCACTTCAGATACCACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000618240.4
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp GGTCTGCAGCCCCGCAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCACCTTCCCTCCTGTCACCCTaGCCCGATCGCGCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: GLQPRSRSTGYSQACSSPSLLSP*PDRAPS
Trigger: AGAAGGAGCGCGATCGGGCCAGGGTGACAGGAGGGA...AGGTGAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGGGGCTGCAGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp GCGATGAGCAGCTTTGTGAGGTCGTGCGGCTCCCCATCATGGCCGGCGGACCCCAAGGGGAACAGGCTCTaGGCAGCCTTCCAGCCATCT +
Preference number: 4 (lower is better)
Translates to: AMSSFVRSCGSPSWPADPKGNRL*AAFQPS
Trigger: AGATGGCTGGAAGGCTGCCCAGAGCCTGTTCCCCTT...GGGGTCCGCCGGCCATGATGGGGAGCCGCACGACCTCACAAAGCTGCTCATCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR CCA 90 bp GTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCACCTCCGCGATGAGCAGCTTGCAAAGGTCCCCGCCTaGGCCTGCTCCAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: VAALAIPRPALHLRDEQLAKVPA*ACSSSS
Trigger: GGAGCTGCTGGAGCAGGCCCAGGCGGGGACCTTTGC...AAGCTGCTCATCGCGGAGGTGAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp AGCGCTGGGCTCCCCGAGGAAGGCGCTGCTCAGGGCTTCGTCCTTGCTGTTCTGCTCTTCAGAGTTGGGTaGGGCTTGGCTGGGATCCCC +
Preference number: 4 (lower is better)
Translates to: SAGLPEEGAAQGFVLAVLLFRVG*GLAGIP
Trigger: GGGGATCCCAGCCAAGCCCCACCCAACTCTGAAGAG...CAGAACAGCAAGGACGAAGCCCTGAGCAGCGCCTTCCTCGGGGAGCCCAGCGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp GTCGACCGTCCCTCAGCTGCCCCTTCATCAGACTGTCCAGGGGGAAAGAGACAAGGGTCTGGAGGTGCCTaGGGGCTCTCGGAGGCCCTC +
Preference number: 4 (lower is better)
Translates to: VDRPSAAPSSDCPGGKRQGSGGA*GLSEAL
Trigger: GAGGGCCTCCGAGAGCCCCCAGGCACCTCCAGACCC...TTGTCTCTTTCCCCCTGGACAGTCTGATGAAGGGGCAGCTGAGGGACGGTCGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp CCACGGCCTCTCGGTACTGCTCTTCATTCTCCACATGGCCAAGGCCGGAGCTATGGGTCTGGAGGTGCCTaGGGGCTCTCGGAGGCCCTC +
Preference number: 4 (lower is better)
Translates to: PRPLGTALHSPHGQGRSYGSGGA*GLSEAL
Trigger: GAGGGCCTCCGAGAGCCCCCAGGCACCTCCAGACCC...ATAGCTCCGGCCTTGGCCATGTGGAGAATGAAGAGCAGTACCGAGAGGCCGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp AGGGCTCCCAGGCCCCTAGCGGGTAATGAGATAGGAAAGAACCGCCATCAGTCCGGGTCTGGAGGTGCCTaGGGGCTCTCGGAGGCCCTC +
Preference number: 4 (lower is better)
Translates to: RAPRPLAGNEIGKNRHQSGSGGA*GLSEAL
Trigger: GAGGGCCTCCGAGAGCCCCCAGGCACCTCCAGACCC...GGACTGATGGCGGTTCTTTCCTATCTCATTACCCGCTAGGGGCCTGGGAGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635461.1
ENST00000635693.1
CDS-3UTR CCA 90 bp TGGGGTCTGCAGCCCCGCAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCAATGTCAGGCTGGGTCTaGAGGTGCCTGGGGGCTCTC +
Preference number: 4 (lower is better)
Translates to: WGLQPRSRSTGYSQACSSMSGWV*RCLGAL
Trigger: GAGAGCCCCCAGGCACCTCCAGACCCAGCCTGACAT...TGAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGGGGCTGCAGACCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp CAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCACCTCCGCGATGAGCAGCCCGGCACGTTCCTTCTaGGCAGAGGCTGCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: QSQHWLFPGLLFTSAMSSPARSF*AEAAWL
Trigger: CAGCCAGGCAGCCTCTGCCCAGAAGGAACGTGCCGG...GCTGCTCATCGCGGAGGTGAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp GAGCAGCTTTGTGAGGTCGTGCGGCTCCCCATCATGGCCGGCGGACCCCCAGGACCCAGCTCTGAACATTaGGGCCTAGCATGGGGCATG +
Preference number: 4 (lower is better)
Translates to: EQLCEVVRLPIMAGGPPGPSSEH*GLAWGM
Trigger: CATGCCCCATGCTAGGCCCCAATGTTCAGAGCTGGG...TCCTGGGGGTCCGCCGGCCATGATGGGGAGCCGCACGACCTCACAAAGCTGCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR CAA 72 bp GGCTCCCCGAGGAAGGCGCTGCTCAGGGCTTCGTCCTaGCTGTTCTGCAACACTGACACCCACGCCTCACAC +
Preference number: 4 (lower is better)
Translates to: GSPRKALLRASS*LFCNTDTHASH
Trigger: GTGTGAGGCGTGGGTGTCAGTGTTGCAGAACAGCAAGGACGAAGCCCTGAGCAGCGCCTTCCTCGGGGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR TCA 90 bp CCAGCTTTCCACCAAAGGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGGTGGAACTCGGCGACGCTaGACTGCTCCGGCATGGCGG +
Preference number: 4 (lower is better)
Translates to: PAFHQRTTPAGPLSYSCGGTRRR*TAPAWR
Trigger: CCGCCATGCCGGAGCAGTTCAGCGTCGCCGAGTTCC...ACCACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000618240.4
ENST00000634561.2
ENST00000635693.1
CDS-3UTR TCA 90 bp CTGCAGCCCCGCAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCACCTCCGCAGCAACCTCGCGGGTaGACACGGCCAAGTTTAGGA +
Preference number: 4 (lower is better)
Translates to: LQPRSRSTGYSQACSSPPQQPRG*TRPSLG
Trigger: TCCTAAACTTGGCCGTGTTCACCCGCGAGGTTGCTG...CGGAGGTGAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGGGGCTGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR TCA 90 bp GCGCGAAAAGCGCACGCCCAGTTCGCGGTGGACGCCCGAGCACTGGATGCAGGTGGCTCTCCCCGGCTTTaGGCAGATACTCACACATGT +
Preference number: 4 (lower is better)
Translates to: ARKAHAQFAVDARALDAGGSPRL*ADTHTC
Trigger: ACATGTGTGAGTATCTGCTCAAAGCCGGGGAGAGCC...ACCTGCATCCAGTGCTCGGGCGTCCACCGCGAACTGGGCGTGCGCTTTTCGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR TCA 90 bp GCGCGAAAAGCGCACGCCCAGTTCGCGGTGGACGCCCGAGCACTGGATGCAGGTATGGAGTGCATGTACTaGGGCCGCCAGCTTCTCGAT +
Preference number: 4 (lower is better)
Translates to: ARKAHAQFAVDARALDAGMECMY*GRQLLD
Trigger: ATCGAGAAGCTGGCGGCCTCAGTACATGCACTCCAT...ACCTGCATCCAGTGCTCGGGCGTCCACCGCGAACTGGGCGTGCGCTTTTCGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR TCA 90 bp GCGCACGCCCAGTTCGCGGTGGACGCCCGAGCACTGGATGCAGGTGAGCACGCCGTTTATCGTGCTGTGTaGGATGGTCAGGCAGCCATA +
Preference number: 4 (lower is better)
Translates to: AHAQFAVDARALDAGEHAVYRAV*DGQAAI
Trigger: TATGGCTGCCTGACCATCTCACACAGCACGATAAAC...GGCGTGCTCACCTGCATCCAGTGCTCGGGCGTCCACCGCGAACTGGGCGTGCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR TCA 90 bp CACCTCCGCGATGAGCAGCTTTGTGAGGTCGTGCGGCTCCCCATCATGGCCGGCGCTGTTCTGCAACACTaGCACCCACGCCTCACACTC +
Preference number: 4 (lower is better)
Translates to: HLRDEQLCEVVRLPIMAGAVLQH*HPRLTL
Trigger: GAGTGTGAGGCGTGGGTGTCAGTGTTGCAGAACAGC...GCCGGCCATGATGGGGAGCCGCACGACCTCACAAAGCTGCTCATCGCGGAGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR TCA 90 bp TGCAGCCCCGCAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCACCTCCGCGCTGTTCTGCAACACTaGCACCCACGCCTCACACTC +
Preference number: 4 (lower is better)
Translates to: CSPAVAALAIPRPALHLRAVLQH*HPRLTL
Trigger: GAGTGTGAGGCGTGGGTGTCAGTGTTGCAGAACAGC...GCGGAGGTGAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGGGGCTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR TCA 90 bp CACCTCCGCGATGAGCAGCTTTGTGAGGTCGTGCGGCTCCCCATCATGGCCGGCCAGGTCCAAGGTGAGTaGCTGCATGCGCGAAAAGCG +
Preference number: 4 (lower is better)
Translates to: HLRDEQLCEVVRLPIMAGQVQGE*LHARKA
Trigger: CGCTTTTCGCGCATGCAGTCACTCACCTTGGACCTG...GCCGGCCATGATGGGGAGCCGCACGACCTCACAAAGCTGCTCATCGCGGAGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR TCA 90 bp ATGAGCAGCTTTGTGAGGTCGTGCGGCTCCCCATCATGGCCGGCGGACCCCCAGCCAGCAGGTCCAAGGTaGGTGACTGCATGCGCGAAA +
Preference number: 4 (lower is better)
Translates to: MSSFVRSCGSPSWPADPQPAGPR*VTACAK
Trigger: TTTCGCGCATGCAGTCACTCACCTTGGACCTGCTGG...CTGGGGGTCCGCCGGCCATGATGGGGAGCCGCACGACCTCACAAAGCTGCTCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR TCA 90 bp CAAGCCCAACCCTTAAGACCAGCTTTCCACCAAAGGACCACCCCTGCAGGGCCCGCTGTCCAGAGTCGCTaGGGCTCAGGTGTGCACCGG +
Preference number: 4 (lower is better)
Translates to: QAQPLRPAFHQRTTPAGPAVQSR*GSGVHR
Trigger: CCGGTGCACACCTGAGCCTCAGCGACTCTGGACAGC...GGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGCTGGTCTTAAGGGTTGGGCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR TCA 90 bp GCTTTCCACCAAAGGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGGTATCCTCCCACTGGCCCAGTaGGCCTGGGCCGGGAGCTTC +
Preference number: 4 (lower is better)
Translates to: AFHQRTTPAGPLSYSCGILPLAQ*AWAGSF
Trigger: GAAGCTCCCGGCCCAGGCTCACTGGGCCAGTGGGAG...GATACCACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR TCA 90 bp CCAGCTTTCCACCAAAGGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGGTTCCTCACTCTCGCCCTaGGGGGTGGCTGCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: PAFHQRTTPAGPLSYSCGSSLSP*GVAAPR
Trigger: CCTGGGAGCAGCCACCCCTCAGGGCGAGAGTGAGGA...ACCACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR TCA 90 bp CAGTCCCTACTTGGCAGGGTCCCTGATCTGGAAGTCAGTGATGGAGGGCTCTCCTCCTCACTCTCGCCCTaGGGGGTGGCTGCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: QSLLGRVPDLEVSDGGLSSSLSP*GVAAPR
Trigger: CCTGGGAGCAGCCACCCCTCAGGGCGAGAGTGAGGA...GGAGAGCCCTCCATCACTGACTTCCAGATCAGGGACCCTGCCAAGTAGGGACTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR TCA 90 bp TCCAGCCACAGGGCTCCCAGGCCCCTAGCGGGTAATGAGATAGGAAAGAACCGCGAACGATTCTCGCCCTaGGGGGTGGCTGCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: SSHRAPRPLAGNEIGKNRERFSP*GVAAPR
Trigger: CCTGGGAGCAGCCACCCCTCAGGGCGAGAATCGTTC...GCGGTTCTTTCCTATCTCATTACCCGCTAGGGGCCTGGGAGCCCTGTGGCTGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000465372.5
ENST00000635461.1
CDS-3UTR GCA 90 bp GCTTTCCACCAAAGGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGGTATCTCGGCGACGCTGAACTaGTCCGGCATGGCGGGCGCG +
Preference number: 4 (lower is better)
Translates to: AFHQRTTPAGPLSYSCGISATLN*SGMAGA
Trigger: CGCGCCCGCCATGCCGGAGCAGTTCAGCGTCGCCGA...GATACCACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000618240.4
ENST00000634561.2
ENST00000635693.1
CDS-3UTR GCA 90 bp ACCCTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCACATCGGCGACGCTGAACTaGTCCGGCATGGCGGGCGCG +
Preference number: 4 (lower is better)
Translates to: TLFLWEPQTSQVSRGNSTSATLN*SGMAGA
Trigger: CGCGCCCGCCATGCCGGAGCAGTTCAGCGTCGCCGA...TGTGCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000618240.4
ENST00000634561.2
ENST00000635693.1
CDS-3UTR GCA 90 bp AGCGCTGGGCTCCCCGAGGAAGGCGCTGCTCAGGGCTTCGTCCTTGCTGTTCTGTCTCTGCTCTCAAGCTaGAGTGTCCCTCGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: SAGLPEEGAAQGFVLAVLSLLSS*SVPRRE
Trigger: CTCCCTCCGAGGGACACTGCAGCTTGAGAGCAGAGA...CAGAACAGCAAGGACGAAGCCCTGAGCAGCGCCTTCCTCGGGGAGCCCAGCGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR GCA 90 bp CCAGCTTTCCACCAAAGGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGGTGAGCCACGTGGGGTCTaGAGCCCCGCAGTCGCAGCA +
Preference number: 4 (lower is better)
Translates to: PAFHQRTTPAGPLSYSCGEPRGV*SPAVAA
Trigger: TGCTGCGACTGCGGGGCTGCAGACCCCACGTGGCTC...ACCACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR GCA 90 bp CAAAGTCCTGCCCATTGGCAAAGGCCTCCAGTACCGACAGGAGGTCCCTGTTGCGAGCCACGTGGGGTCTaGAGCCCCGCAGTCGCAGCA +
Preference number: 4 (lower is better)
Translates to: QSPAHWQRPPVPTGGPCCEPRGV*SPAVAA
Trigger: TGCTGCGACTGCGGGGCTGCAGACCCCACGTGGCTC...GCAACAGGGACCTCCTGTCGGTACTGGAGGCCTTTGCCAATGGGCAGGACTTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR GCA 90 bp AGCGCTGGGCTCCCCGAGGAAGGCGCTGCTCAGGGCTTCGTCCTTGCTGTTCTGGGCTGTCCAAAGTCCTaGCCATTGGCAAAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: SAGLPEEGAAQGFVLAVLGCPKS*PLAKAS
Trigger: GGAGGCCTTTGCCAATGGGCAGGACTTTGGACAGCC...CAGAACAGCAAGGACGAAGCCCTGAGCAGCGCCTTCCTCGGGGAGCCCAGCGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR GCA 90 bp GGCCTGCTCTTCACCTCCGCGATGAGCAGCTTTGTGAGGTCGTGCGGCTCCCCATTCTTCAGGTGCCTGTaGATCAGGCCCTGGCAGCGG +
Preference number: 4 (lower is better)
Translates to: GLLFTSAMSSFVRSCGSPFFRCL*IRPWQR
Trigger: CCGCTGCCAGGGCCTGATGCACAGGCACCTGAAGAA...TGGGGAGCCGCACGACCTCACAAAGCTGCTCATCGCGGAGGTGAAGAGCAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR GCA 90 bp GCGCACGCCCAGTTCGCGGTGGACGCCCGAGCACTGGATGCAGGTGAGCACGCCTCACACTCCTTGTGGTaGTTCTTCCTGGCTATGTCC +
Preference number: 4 (lower is better)
Translates to: AHAQFAVDARALDAGEHASHSLW*FFLAMS
Trigger: GGACATAGCCAGGAAGAAGCACCACAAGGAGTGTGA...GGCGTGCTCACCTGCATCCAGTGCTCGGGCGTCCACCGCGAACTGGGCGTGCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR GCA 90 bp CTTGGCAGGGTCCCTGATCTGGAAGTCAGTGATGGAGGGCTCTCCTGCCCTTGTGTCCCCGCCTGGGCCTaGTCCAGCAGCTCCTCACAC +
Preference number: 4 (lower is better)
Translates to: LGRVPDLEVSDGGLSCPCVPAWA*SSSSSH
Trigger: GTGTGAGGAGCTGCTGGAGCAGGCCCAGGCGGGGAC...ACAAGGGCAGGAGAGCCCTCCATCACTGACTTCCAGATCAGGGACCCTGCCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR GCA 90 bp CTGATCTGGAAGTCAGTGATGGAGGGCTCTCCTGCCCTTGTGAAGCCCCCAGACGCCCTGAGGGGTGGCTaGTCCCAGGCTGGCGACAGT +
Preference number: 4 (lower is better)
Translates to: LIWKSVMEGSPALVKPPDALRGG*SQAGDS
Trigger: ACTGTCGCCAGCCTGGGAGCAGCCACCCCTCAGGGC...GTCTGGGGGCTTCACAAGGGCAGGAGAGCCCTCCATCACTGACTTCCAGATCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR GCA 90 bp AGGGCTCCCAGGCCCCTAGCGGGTAATGAGATAGGAAAGAACCGCCATCAGTCCGCCCTGAGGGGTGGCTaGTCCCAGGCTGGCGACAGT +
Preference number: 4 (lower is better)
Translates to: RAPRPLAGNEIGKNRHQSALRGG*SQAGDS
Trigger: ACTGTCGCCAGCCTGGGAGCAGCCACCCCTCAGGGC...GGACTGATGGCGGTTCTTTCCTATCTCATTACCCGCTAGGGGCCTGGGAGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
ENST00000635461.1
CDS-3UTR GCA 90 bp CAGGGGTCTCAGGGGCCTCTGAACTCAGGCTGGAGACTTCAGAACGATCTCCACGCCCTGAGGGGTGGCTaGTCCCAGGCTGGCGACAGT +
Preference number: 4 (lower is better)
Translates to: QGSQGPLNSGWRLQNDLHALRGG*SQAGDS
Trigger: ACTGTCGCCAGCCTGGGAGCAGCCACCCCTCAGGGC...GTGGAGATCGTTCTGAAGTCTCCAGCCTGAGTTCAGAGGCCCCTGAGACCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR GCA 90 bp GGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGGTATCTGAAGTGCCTAACGGCTGGGTCTGGAGGTaGCTGGGGGCTCTCGGAGGC +
Preference number: 4 (lower is better)
Translates to: GPPLQGPCLTRVVSEVPNGWVWR*LGALGG
Trigger: GCCTCCGAGAGCCCCCAGGCACCTCCAGACCCAGCC...GTTAGGCACTTCAGATACCACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR GCA 90 bp GCTTTCCACCAAAGGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGGTATCGGCTGGGTCTGGAGGTaGCTGGGGGCTCTCGGAGGC +
Preference number: 4 (lower is better)
Translates to: AFHQRTTPAGPLSYSCGIGWVWR*LGALGG
Trigger: GCCTCCGAGAGCCCCCAGGCACCTCCAGACCCAGCC...GATACCACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR GCA 90 bp CCAGCTTTCCACCAAAGGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGGTGGCTTGGCCCATTCCTaGCAGGGCCCAGCACCCAGC +
Preference number: 4 (lower is better)
Translates to: PAFHQRTTPAGPLSYSCGGLAHS*QGPAPS
Trigger: GCTGGGTGCTGGGCCCTGGCAGGAATGGGCCAAGCC...ACCACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR GCA 90 bp CAGTCCCTACTTGGCAGGGTCCCTGATCTGGAAGTCAGTGATGGAGGGCTCTCCGGCTTGGCCCATTCCTaGCAGGGCCCAGCACCCAGC +
Preference number: 4 (lower is better)
Translates to: QSLLGRVPDLEVSDGGLSGLAHS*QGPAPS
Trigger: GCTGGGTGCTGGGCCCTGGCAGGAATGGGCCAAGCC...GGAGAGCCCTCCATCACTGACTTCCAGATCAGGGACCCTGCCAAGTAGGGACTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR GCA 90 bp CTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCACAGCCGGCTTGGCCCATTCCTaGCAGGGCCCAGCACCCAGC +
Preference number: 4 (lower is better)
Translates to: LFLWEPQTSQVSRGNSTAGLAHS*QGPAPS
Trigger: GCTGGGTGCTGGGCCCTGGCAGGAATGGGCCAAGCC...GGCTGTGCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp TTCCCAGGCCTGCTCTTCACCTCCGCGATGAGCAGCTTTGTGAGGTCGTGCGGCTCCCTCCTGTCACCCTaGCCCGATCGCGCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: FPGLLFTSAMSSFVRSCGSLLSP*PDRAPS
Trigger: AGAAGGAGCGCGATCGGGCCAGGGTGACAGGAGGGA...GCCGCACGACCTCACAAAGCTGCTCATCGCGGAGGTGAAGAGCAGGCCTGGGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp AGGCCTGCTCTTCACCTCCGCGATGAGCAGCTTTGTGAGGTCGTGCGGCTCCCCAGGGAGTCCCGGAGCTaGGTCAGCTTCTGTAGCTCG +
Preference number: 4 (lower is better)
Translates to: RPALHLRDEQLCEVVRLPRESRS*VSFCSS
Trigger: CGAGCTACAGAAGCTGACCCAGCTCCGGGACTCCCT...GGGGAGCCGCACGACCTCACAAAGCTGCTCATCGCGGAGGTGAAGAGCAGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR CCA 90 bp GTGGGGTCTGCAGCCCCGCAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCTGGTACGTCCGGTTGTaGGTCACCAGGTCGAAGCAC +
Preference number: 4 (lower is better)
Translates to: VGSAAPQSQHWLFPGLLFWYVRL*VTRSKH
Trigger: GTGCTTCGACCTGGTGACCCACAACCGGACGTACCA...GAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGGGGCTGCAGACCCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR CCA 90 bp CACCAGAGGCAGGGAAGCCTGGTTGGCGACTTTGACAGCCAAATGCAAGACGAGTGCGGCTCCCCATCATaGCCGGCGGACCCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: HQRQGSLVGDFDSQMQDECGSPS*PADPQD
Trigger: GTCCTGGGGGTCCGCCGGCCATGATGGGGAGCCGCA...CTCGTCTTGCATTTGGCTGTCAAAGTCGCCAACCAGGCTTCCCTGCCTCTGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp ACCGCCATCAGTCCTAACAGGGAAAGGCCATGTGTCCTTGGTAGAGGCATGGCCTGCGGCTCCCCATCATaGCCGGCGGACCCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: TAISPNRERPCVLGRGMACGSPS*PADPQD
Trigger: GTCCTGGGGGTCCGCCGGCCATGATGGGGAGCCGCA...GGCCATGCCTCTACCAAGGACACATGGCCTTTCCCTGTTAGGACTGATGGCGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000492982.6
ENST00000634561.2
ENST00000634705.1
CDS-3UTR CCA 90 bp AGCAGGTCCAAGGTGAGTGACTGCATGCGCGAAAAGCGCACGCCCAGTTCGCGGCCGCAGTCGCAGCACTaGCTATTCCCAGGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: SRSKVSDCMREKRTPSSRPQSQH*LFPGLL
Trigger: GAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGG...CCGCGAACTGGGCGTGCGCTTTTCGCGCATGCAGTCACTCACCTTGGACCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR CCA 90 bp TCCAGCCACAGGGCTCCCAGGCCCCTAGCGGGTAATGAGATAGGAAAGAACCGCTGGACGCCCGAGCACTaGATGCAGGTGAGCACGCCC +
Preference number: 4 (lower is better)
Translates to: SSHRAPRPLAGNEIGKNRWTPEH*MQVSTP
Trigger: GGGCGTGCTCACCTGCATCCAGTGCTCGGGCGTCCA...GCGGTTCTTTCCTATCTCATTACCCGCTAGGGGCCTGGGAGCCCTGTGGCTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR CCA 90 bp CAGCCTCCCACTGGCCCAGTGAGCCTGGGCCGGGAGCTTCAGCAAGCAGCGCTTGGTCCCTGTTGCAAATaGCTGTCCAGAGTCGCTGAG +
Preference number: 4 (lower is better)
Translates to: QPPTGPVSLGRELQQAALGPCCK*LSRVAE
Trigger: CTCAGCGACTCTGGACAGCCATTTGCAACAGGGACC...AAGCGCTGCTTGCTGAAGCTCCCGGCCCAGGCTCACTGGGCCAGTGGGAGGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484418.1
ENST00000635167.1
CDS-3UTR CCA 90 bp CATGTAGAGGGAAGGCAAAGGTCCCCGCCTGGGCCTGCTCCAGCAGCTCCTCACTCCCGTCAGCAGCCTTaGCATCCAGGTGACCACCGT +
Preference number: 4 (lower is better)
Translates to: HVEGRQRSPPGPAPAAPHSRQQP*HPGDHR
Trigger: ACGGTGGTCACCTGGATGCCAAGGCTGCTGACGGGA...GTGAGGAGCTGCTGGAGCAGGCCCAGGCGGGGACCTTTGCCTTCCCTCTACATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
CDS-3UTR CCA 90 bp ACCGCCATCAGTCCTAACAGGGAAAGGCCATGTGTCCTTGGTAGAGGCATGGCCGGGTCTGGAGGTGCCTaGGGGCTCTCGGAGGCCCTC +
Preference number: 4 (lower is better)
Translates to: TAISPNRERPCVLGRGMAGSGGA*GLSEAL
Trigger: GAGGGCCTCCGAGAGCCCCCAGGCACCTCCAGACCC...GGCCATGCCTCTACCAAGGACACATGGCCTTTCCCTGTTAGGACTGATGGCGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000492982.6
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635461.1
ENST00000635693.1
CDS-3UTR CCA 90 bp ACAACCCTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCGGGTCTGGAGGTGCCTaGGGGCTCTCGGAGGCCCTC +
Preference number: 4 (lower is better)
Translates to: TTLFLWEPQTSQVSRGNSGSGGA*GLSEAL
Trigger: GAGGGCCTCCGAGAGCCCCCAGGCACCTCCAGACCC...GCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAGGGTTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp TCAGGGTTTGGCCTCACTTGGCACGTCAGCAGGGTCAGCTTCACCGGGGGCCGGCCCAGCTCTGAACATTaGGGCCTAGCATGGGGCATG +
Preference number: 4 (lower is better)
Translates to: SGFGLTWHVSRVSFTGGRPSSEH*GLAWGM
Trigger: CATGCCCCATGCTAGGCCCCAATGTTCAGAGCTGGG...CCGGCCCCCGGTGAAGCTGACCCTGCTGACGTGCCAAGTGAGGCCAAACCCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR TCA 90 bp ACCGCCATCAGTCCTAACAGGGAAAGGCCATGTGTCCTTGGTAGAGGCATGGCCGGAACTCGGCGACGCTaGACTGCTCCGGCATGGCGG +
Preference number: 4 (lower is better)
Translates to: TAISPNRERPCVLGRGMAGTRRR*TAPAWR
Trigger: CCGCCATGCCGGAGCAGTTCAGCGTCGCCGAGTTCC...GGCCATGCCTCTACCAAGGACACATGGCCTTTCCCTGTTAGGACTGATGGCGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000492982.6
ENST00000618240.4
ENST00000634561.2
ENST00000634705.1
ENST00000635693.1
CDS-3UTR TCA 90 bp AGCGCTGGGCTCCCCGAGGAAGGCGCTGCTCAGGGCTTCGTCCTTGCTGTTCTGGGCTCTCCCCGGCTTTaGGCAGATACTCACACATGT +
Preference number: 4 (lower is better)
Translates to: SAGLPEEGAAQGFVLAVLGSPRL*ADTHTC
Trigger: ACATGTGTGAGTATCTGCTCAAAGCCGGGGAGAGCC...CAGAACAGCAAGGACGAAGCCCTGAGCAGCGCCTTCCTCGGGGAGCCCAGCGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR TCA 90 bp CAAGCCCAACCCTTAAGACCAGCTTTCCACCAAAGGACCACCCCTGCAGGGCCCCCGCCAGCTTCTCGATaGAGGGGAACAGGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: QAQPLRPAFHQRTTPAGPPPASR*RGTGSG
Trigger: CCCAGAGCCTGTTCCCCTTCATCGAGAAGCTGGCGG...GGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGCTGGTCTTAAGGGTTGGGCTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR TCA 90 bp TGCAGCCCCGCAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCACCTCCGCATGGAGTGCATGTACTaGGGCCGCCAGCTTCTCGAT +
Preference number: 4 (lower is better)
Translates to: CSPAVAALAIPRPALHLRMECMY*GRQLLD
Trigger: ATCGAGAAGCTGGCGGCCTCAGTACATGCACTCCAT...GCGGAGGTGAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGGGGCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR TCA 90 bp ATGAGCAGCTTTGTGAGGTCGTGCGGCTCCCCATCATGGCCGGCGGACCCCCAGGCTATAGCCACATCCTaGGTTCTTCCGGCTCAGGTG +
Preference number: 4 (lower is better)
Translates to: MSSFVRSCGSPSWPADPQAIATS*VLPAQV
Trigger: CACCTGAGCCGGAAGAACTCAGGATGTGGCTATAGC...CTGGGGGTCCGCCGGCCATGATGGGGAGCCGCACGACCTCACAAAGCTGCTCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR TCA 90 bp CTGCAGCCCCGCAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCACCTCCGGCTATAGCCACATCCTaGGTTCTTCCGGCTCAGGTG +
Preference number: 4 (lower is better)
Translates to: LQPRSRSTGYSQACSSPPAIATS*VLPAQV
Trigger: CACCTGAGCCGGAAGAACTCAGGATGTGGCTATAGC...CGGAGGTGAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGGGGCTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR TCA 90 bp TGGGGTCTGCAGCCCCGCAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCATGCTCGTCCTCTGCCTaGAAGTGGTACGTCCGGTTG +
Preference number: 4 (lower is better)
Translates to: WGLQPRSRSTGYSQACSSCSSSA*KWYVRL
Trigger: CAACCGGACGTACCACTTTCAGGCAGAGGACGAGCA...TGAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGGGGCTGCAGACCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR TCA 90 bp CAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCACCTCCGCGATGAGCAGCCATGTCACTCTCAGCTaGGGGTTTAGGGCCGCCGTG +
Preference number: 4 (lower is better)
Translates to: QSQHWLFPGLLFTSAMSSHVTLS*GFRAAV
Trigger: CACGGCGGCCCTAAACCCTCAGCTGAGAGTGACATG...GCTGCTCATCGCGGAGGTGAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR TCA 90 bp GCCAACCAAAGCTCTCCCCTTCAGCAGCAGCTTGAGGCAGTCGGGCTGGTTGTAGCTGTCCAGAGTCGCTaGGGCTCAGGTGTGCACCGG +
Preference number: 4 (lower is better)
Translates to: ANQSSPLQQQLEAVGLVVAVQSR*GSGVHR
Trigger: CCGGTGCACACCTGAGCCTCAGCGACTCTGGACAGC...TACAACCAGCCCGACTGCCTCAAGCTGCTGCTGAAGGGGAGAGCTTTGGTTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
CDS-3UTR TCA 90 bp GAGTCTCGATCTGATGAGGGACTGAGAGTTCTGCAGCTGAAGCCAGCTCAGGAGCTCCCACTGGCCCAGTaGGCCTGGGCCGGGAGCTTC +
Preference number: 4 (lower is better)
Translates to: ESRSDEGLRVLQLKPAQELPLAQ*AWAGSF
Trigger: GAAGCTCCCGGCCCAGGCTCACTGGGCCAGTGGGAG...CTCCTGAGCTGGCTTCAGCTGCAGAACTCTCAGTCCCTCATCAGATCGAGACTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
ENST00000635461.1
CDS-3UTR TCA 90 bp GGCATCCAGGTGACCACCGTTCTGGATGATGAAATCCACCAGAGGCAGGGAAGCTCCTCACTCTCGCCCTaGGGGGTGGCTGCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: GIQVTTVLDDEIHQRQGSSSLSP*GVAAPR
Trigger: CCTGGGAGCAGCCACCCCTCAGGGCGAGAGTGAGGA...GCTTCCCTGCCTCTGGTGGATTTCATCATCCAGAACGGTGGTCACCTGGATGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR TCA 90 bp AGGCCTGCTCTTCACCTCCGCGATGAGCAGCTTTGTGAGGTCGTGCGGCTCCCCAGCCATCTCCTTCAGTaGTGCCAACCGGCACGTTCC +
Preference number: 4 (lower is better)
Translates to: RPALHLRDEQLCEVVRLPSHLLQ*CQPARS
Trigger: GGAACGTGCCGGTTGGCATCACTGAAGGAGATGGCT...GGGGAGCCGCACGACCTCACAAAGCTGCTCATCGCGGAGGTGAAGAGCAGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR TCA 90 bp AGGGTCCCTGATCTGGAAGTCAGTGATGGAGGGCTCTCCTGCCCTTGTGAAGCCGCTCTCCTGCCCTTGTaGAGCCCCCAGACTGACGGG +
Preference number: 4 (lower is better)
Translates to: RVPDLEVSDGGLSCPCEAALLPL*SPQTDG
Trigger: CCCGTCAGTCTGGGGGCTTCACAAGGGCAGGAGAGC...GGCTTCACAAGGGCAGGAGAGCCCTCCATCACTGACTTCCAGATCAGGGACCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR TCA 90 bp AGGGCTCCCAGGCCCCTAGCGGGTAATGAGATAGGAAAGAACCGCCATCAGTCCGAACGATTCTCGCCCTaGGGGGTGGCTGCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: RAPRPLAGNEIGKNRHQSERFSP*GVAAPR
Trigger: CCTGGGAGCAGCCACCCCTCAGGGCGAGAATCGTTC...GGACTGATGGCGGTTCTTTCCTATCTCATTACCCGCTAGGGGCCTGGGAGCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000465372.5
ENST00000635461.1
CDS-3UTR GCA 90 bp TCCAGCCACAGGGCTCCCAGGCCCCTAGCGGGTAATGAGATAGGAAAGAACCGCATGCGCCGCTCTCTCTaGATGTCCTGGGCCACCTCC +
Preference number: 4 (lower is better)
Translates to: SSHRAPRPLAGNEIGKNRMRRSL*MSWATS
Trigger: GGAGGTGGCCCAGGACATGCAGAGAGAGCGGCGCAT...GCGGTTCTTTCCTATCTCATTACCCGCTAGGGGCCTGGGAGCCCTGTGGCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR GCA 90 bp GCGCGAAAAGCGCACGCCCAGTTCGCGGTGGACGCCCGAGCACTGGATGCAGGTTCAGGTGTTCCTCTCTaGTCTCAAGCTGCAGTGTCC +
Preference number: 4 (lower is better)
Translates to: ARKAHAQFAVDARALDAGSGVPL*SQAAVS
Trigger: GGACACTGCAGCTTGAGAGCAGAGAGGAACACCTGA...ACCTGCATCCAGTGCTCGGGCGTCCACCGCGAACTGGGCGTGCGCTTTTCGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR GCA 90 bp TCAGGGTTTGGCCTCACTTGGCACGTCAGCAGGGTCAGCTTCACCGGGGGCCGGTCGTCCTTGCTGTTCTaGAACACTGACACCCACGCC +
Preference number: 4 (lower is better)
Translates to: SGFGLTWHVSRVSFTGGRSSLLF*NTDTHA
Trigger: GGCGTGGGTGTCAGTGTTGCAGAACAGCAAGGACGA...CCGGCCCCCGGTGAAGCTGACCCTGCTGACGTGCCAAGTGAGGCCAAACCCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR GCA 90 bp GCCTCCCACTGGCCCAGTGAGCCTGGGCCGGGAGCTTCAGCAAGCAGCGCTTCTCTGGTTGTAGAGTGCTaGGTAGTGCAGAGCCGTGTT +
Preference number: 4 (lower is better)
Translates to: ASHWPSEPGPGASASSASLVVEC*VVQSRV
Trigger: AACACGGCTCTGCACTACGCAGCACTCTACAACCAG...AGAAGCGCTGCTTGCTGAAGCTCCCGGCCCAGGCTCACTGGGCCAGTGGGAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484418.1
ENST00000635167.1
CDS-3UTR GCA 90 bp AGCTTCAGCAAGCAGCGCTTCTCTTCCTCATCCTCCTCACTGTCAGAGCCAGGCGTCCCCGCCTGGGCCTaGTCCAGCAGCTCCTCACAC +
Preference number: 4 (lower is better)
Translates to: SFSKQRFSSSSSSLSEPGVPAWA*SSSSSH
Trigger: GTGTGAGGAGCTGCTGGAGCAGGCCCAGGCGGGGAC...GCCTGGCTCTGACAGTGAGGAGGATGAGGAAGAGAAGCGCTGCTTGCTGAAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484418.1
ENST00000635167.1
CDS-3UTR GCA 90 bp TGCCCTTGTGAAGCCCCCAGACTGACGGGGGAAATAGAGTCTCGATCTGATGAGGGCTGGGTCTGGAGGTaGCTGGGGGCTCTCGGAGGC +
Preference number: 4 (lower is better)
Translates to: CPCEAPRLTGEIESRSDEGWVWR*LGALGG
Trigger: GCCTCCGAGAGCCCCCAGGCACCTCCAGACCCAGCC...CTCATCAGATCGAGACTCTATTTCCCCCGTCAGTCTGGGGGCTTCACAAGGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR GCA 90 bp GAGTCTCGATCTGATGAGGGACTGAGAGTTCTGCAGCTGAAGCCAGCTCAGGAGGGCTGGGTCTGGAGGTaGCTGGGGGCTCTCGGAGGC +
Preference number: 4 (lower is better)
Translates to: ESRSDEGLRVLQLKPAQEGWVWR*LGALGG
Trigger: GCCTCCGAGAGCCCCCAGGCACCTCCAGACCCAGCC...CTCCTGAGCTGGCTTCAGCTGCAGAACTCTCAGTCCCTCATCAGATCGAGACTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635461.1
ENST00000635693.1
CDS-3UTR GCA 90 bp GGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGGTATCTGAAGTGCCTAACGGCTTGGCCCATTCCTaGCAGGGCCCAGCACCCAGC +
Preference number: 4 (lower is better)
Translates to: GPPLQGPCLTRVVSEVPNGLAHS*QGPAPS
Trigger: GCTGGGTGCTGGGCCCTGGCAGGAATGGGCCAAGCC...GTTAGGCACTTCAGATACCACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp GCGATGAGCAGCTTTGTGAGGTCGTGCGGCTCCCCATCATGGCCGGCGGACCCCCTGTTCTGGGACAGGTaGCTGTTGCCTAAGGATTCC +
Preference number: 4 (lower is better)
Translates to: AMSSFVRSCGSPSWPADPLFWDR*LLPKDS
Trigger: GGAATCCTTAGGCAACAGCCACCTGTCCCAGAACAG...GGGGTCCGCCGGCCATGATGGGGAGCCGCACGACCTCACAAAGCTGCTCATCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp GCGCACGCCCAGTTCGCGGTGGACGCCCGAGCACTGGATGCAGGTGAGCACGCCGCTCCTTCTCCAGCTTaGCCATTTTGGCTTCATAGT +
Preference number: 4 (lower is better)
Translates to: AHAQFAVDARALDAGEHAAPSPA*PFWLHS
Trigger: ACTATGAAGCCAAAATGGCCAAGCTGGAGAAGGAGC...GGCGTGCTCACCTGCATCCAGTGCTCGGGCGTCCACCGCGAACTGGGCGTGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp GGCCTGCTCTTCACCTCCGCGATGAGCAGCTTTGTGAGGTCGTGCGGCTCCCCAAAGGGGAACAGGCTCTaGGCAGCCTTCCAGCCATCT +
Preference number: 4 (lower is better)
Translates to: GLLFTSAMSSFVRSCGSPKGNRL*AAFQPS
Trigger: AGATGGCTGGAAGGCTGCCCAGAGCCTGTTCCCCTT...TGGGGAGCCGCACGACCTCACAAAGCTGCTCATCGCGGAGGTGAAGAGCAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR CCA 90 bp GAGCAGCTTTGTGAGGTCGTGCGGCTCCCCATCATGGCCGGCGGACCCCCAGGATTTCTCCTCAGGGTTTaGCCTCACTTGGCACGTCAG +
Preference number: 4 (lower is better)
Translates to: EQLCEVVRLPIMAGGPPGFLLRV*PHLARQ
Trigger: CTGACGTGCCAAGTGAGGCCAAACCCTGAGGAGAAA...TCCTGGGGGTCCGCCGGCCATGATGGGGAGCCGCACGACCTCACAAAGCTGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR CCA 90 bp GAGTCTCGATCTGATGAGGGACTGAGAGTTCTGCAGCTGAAGCCAGCTCAGGAGTGCGGCTCCCCATCATaGCCGGCGGACCCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: ESRSDEGLRVLQLKPAQECGSPS*PADPQD
Trigger: GTCCTGGGGGTCCGCCGGCCATGATGGGGAGCCGCA...CTCCTGAGCTGGCTTCAGCTGCAGAACTCTCAGTCCCTCATCAGATCGAGACTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR CCA 90 bp AGGGCTCCCAGGCCCCTAGCGGGTAATGAGATAGGAAAGAACCGCCATCAGTCCACGCCCAGTTCGCGGTaGACGCCCGAGCACTGGATG +
Preference number: 4 (lower is better)
Translates to: RAPRPLAGNEIGKNRHQSTPSSR*TPEHWM
Trigger: CATCCAGTGCTCGGGCGTCCACCGCGAACTGGGCGT...GGACTGATGGCGGTTCTTTCCTATCTCATTACCCGCTAGGGGCCTGGGAGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR CCA 90 bp CATGTAGAGGGAAGGCAAAGGTCCCCGCCTGGGCCTGCTCCAGCAGCTCCTCACCCGTGTGAGGGTAGCTaGGCCTCCATGACCTCATTG +
Preference number: 4 (lower is better)
Translates to: HVEGRQRSPPGPAPAAPHPCEGS*ASMTSL
Trigger: CAATGAGGTCATGGAGGCCCAGCTACCCTCACACGG...GTGAGGAGCTGCTGGAGCAGGCCCAGGCGGGGACCTTTGCCTTCCCTCTACATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
CDS-3UTR CCA 90 bp GTGGGGTCTGCAGCCCCGCAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCGGTCCCTGTTGCAAATaGCTGTCCAGAGTCGCTGAG +
Preference number: 4 (lower is better)
Translates to: VGSAAPQSQHWLFPGLLFGPCCK*LSRVAE
Trigger: CTCAGCGACTCTGGACAGCCATTTGCAACAGGGACC...GAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGGGGCTGCAGACCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp ACCGCCATCAGTCCTAACAGGGAAAGGCCATGTGTCCTTGGTAGAGGCATGGCCGCAAAGGTCCCCGCCTaGGCCTGCTCCAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: TAISPNRERPCVLGRGMAAKVPA*ACSSSS
Trigger: GGAGCTGCTGGAGCAGGCCCAGGCGGGGACCTTTGC...GGCCATGCCTCTACCAAGGACACATGGCCTTTCCCTGTTAGGACTGATGGCGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000492982.6
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
CDS-3UTR CCA 90 bp CCACCGTTCTGGATGATGAAATCCACCAGAGGCAGGGAAGCCTGGTTGGCGACTGCAAAGGTCCCCGCCTaGGCCTGCTCCAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: PPFWMMKSTRGREAWLATAKVPA*ACSSSS
Trigger: GGAGCTGCTGGAGCAGGCCCAGGCGGGGACCTTTGC...AGTCGCCAACCAGGCTTCCCTGCCTCTGGTGGATTTCATCATCCAGAACGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
CDS-3UTR CCA 90 bp GGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGGTATCTGAAGTGCCTAACGCAAAGGTCCCCGCCTaGGCCTGCTCCAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: GPPLQGPCLTRVVSEVPNAKVPA*ACSSSS
Trigger: GGAGCTGCTGGAGCAGGCCCAGGCGGGGACCTTTGC...GTTAGGCACTTCAGATACCACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CCA 90 bp CCACCGTTCTGGATGATGAAATCCACCAGAGGCAGGGAAGCCTGGTTGGCGACTTGTCCAGCCTCCCACTaGCCCAGTGAGCCTGGGCCG +
Preference number: 4 (lower is better)
Translates to: PPFWMMKSTRGREAWLATCPASH*PSEPGP
Trigger: CGGCCCAGGCTCACTGGGCCAGTGGGAGGCTGGACA...AGTCGCCAACCAGGCTTCCCTGCCTCTGGTGGATTTCATCATCCAGAACGGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
CDS-3UTR CCA 90 bp GGCCTGCTCTTCACCTCCGCGATGAGCAGCTTTGTGAGGTCGTGCGGCTCCCCATGGCTGCTCCCAGGCTaGCGACAGTCTCATAGGTCT +
Preference number: 4 (lower is better)
Translates to: GLLFTSAMSSFVRSCGSPWLLPG*RQSHRS
Trigger: AGACCTATGAGACTGTCGCCAGCCTGGGAGCAGCCA...TGGGGAGCCGCACGACCTCACAAAGCTGCTCATCGCGGAGGTGAAGAGCAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp CTCGTGCTCGTCCTCTGCCTGAAAGTGGTACGTCCGGTTGTGGGTCACCAGGTCTGGGTGGGGCTTGGCTaGGATCCCCAGGTTCCAAGG +
Preference number: 4 (lower is better)
Translates to: LVLVLCLKVVRPVVGHQVWVGLG*DPQVPR
Trigger: CCTTGGAACCTGGGGATCCCAGCCAAGCCCCACCCA...GACCTGGTGACCCACAACCGGACGTACCACTTTCAGGCAGAGGACGAGCACGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp TGCCCTTGTGAAGCCCCCAGACTGACGGGGGAAATAGAGTCTCGATCTGATGAGGGGTCTGGAGGTGCCTaGGGGCTCTCGGAGGCCCTC +
Preference number: 4 (lower is better)
Translates to: CPCEAPRLTGEIESRSDEGSGGA*GLSEAL
Trigger: GAGGGCCTCCGAGAGCCCCCAGGCACCTCCAGACCC...CTCATCAGATCGAGACTCTATTTCCCCCGTCAGTCTGGGGGCTTCACAAGGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp GAGTCTCGATCTGATGAGGGACTGAGAGTTCTGCAGCTGAAGCCAGCTCAGGAGGGGTCTGGAGGTGCCTaGGGGCTCTCGGAGGCCCTC +
Preference number: 4 (lower is better)
Translates to: ESRSDEGLRVLQLKPAQEGSGGA*GLSEAL
Trigger: GAGGGCCTCCGAGAGCCCCCAGGCACCTCCAGACCC...CTCCTGAGCTGGCTTCAGCTGCAGAACTCTCAGTCCCTCATCAGATCGAGACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635461.1
ENST00000635693.1
CDS-3UTR CCA 90 bp CAGTCCCTACTTGGCAGGGTCCCTGATCTGGAAGTCAGTGATGGAGGGCTCTCCCTCCCCTGCTTGGCTTaGCCCATTCCTGCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: QSLLGRVPDLEVSDGGLSLPCLA*PIPARA
Trigger: GGCCCTGGCAGGAATGGGCCAAGCCAAGCAGGGGAG...GGAGAGCCCTCCATCACTGACTTCCAGATCAGGGACCCTGCCAAGTAGGGACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp CTGATCTGGAAGTCAGTGATGGAGGGCTCTCCTGCCCTTGTGAAGCCCCCAGACCTCCCCTGCTTGGCTTaGCCCATTCCTGCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: LIWKSVMEGSPALVKPPDLPCLA*PIPARA
Trigger: GGCCCTGGCAGGAATGGGCCAAGCCAAGCAGGGGAG...GTCTGGGGGCTTCACAAGGGCAGGAGAGCCCTCCATCACTGACTTCCAGATCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR CAA 72 bp CTGTGTTGGCCATTGGTGCTCTCTAGTCTCCCCTGCTaGGCTTGGCCCATTCCTGCCAGGGCCCAGCACCCA +
Preference number: 4 (lower is better)
Translates to: LCWPLVLSSLPC*AWPIPARAQHP
Trigger: TGGGTGCTGGGCCCTGGCAGGAATGGGCCAAGCCAAGCAGGGGAGACTAGAGAGCACCAATGGCCAACACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR TCA 90 bp TGCCCTTGTGAAGCCCCCAGACTGACGGGGGAAATAGAGTCTCGATCTGATGAGGGAACTCGGCGACGCTaGACTGCTCCGGCATGGCGG +
Preference number: 4 (lower is better)
Translates to: CPCEAPRLTGEIESRSDEGTRRR*TAPAWR
Trigger: CCGCCATGCCGGAGCAGTTCAGCGTCGCCGAGTTCC...CTCATCAGATCGAGACTCTATTTCCCCCGTCAGTCTGGGGGCTTCACAAGGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000618240.4
ENST00000634561.2
ENST00000635693.1
CDS-3UTR TCA 90 bp CCACGGCCTCTCGGTACTGCTCTTCATTCTCCACATGGCCAAGGCCGGAGCTATCCGCCAGCTTCTCGATaGAGGGGAACAGGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: PRPLGTALHSPHGQGRSYPPASR*RGTGSG
Trigger: CCCAGAGCCTGTTCCCCTTCATCGAGAAGCTGGCGG...ATAGCTCCGGCCTTGGCCATGTGGAGAATGAAGAGCAGTACCGAGAGGCCGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR TCA 90 bp AGGCCTGCTCTTCACCTCCGCGATGAGCAGCTTTGTGAGGTCGTGCGGCTCCCCATGGAGTGCATGTACTaGGGCCGCCAGCTTCTCGAT +
Preference number: 4 (lower is better)
Translates to: RPALHLRDEQLCEVVRLPMECMY*GRQLLD
Trigger: ATCGAGAAGCTGGCGGCCTCAGTACATGCACTCCAT...GGGGAGCCGCACGACCTCACAAAGCTGCTCATCGCGGAGGTGAAGAGCAGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR TCA 90 bp AGCAGGTCCAAGGTGAGTGACTGCATGCGCGAAAAGCGCACGCCCAGTTCGCGGCAGGTCCAAGGTGAGTaGCTGCATGCGCGAAAAGCG +
Preference number: 4 (lower is better)
Translates to: SRSKVSDCMREKRTPSSRQVQGE*LHARKA
Trigger: CGCTTTTCGCGCATGCAGTCACTCACCTTGGACCTG...CCGCGAACTGGGCGTGCGCTTTTCGCGCATGCAGTCACTCACCTTGGACCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR TCA 90 bp TCTGCAACACTGACACCCACGCCTCACACTCGTGCTCGTCCTCTGCCTGAAAGTGCTGTCCAGAGTCGCTaGGGCTCAGGTGTGCACCGG +
Preference number: 4 (lower is better)
Translates to: SATLTPTPHTRARPLPESAVQSR*GSGVHR
Trigger: CCGGTGCACACCTGAGCCTCAGCGACTCTGGACAGC...ACTTTCAGGCAGAGGACGAGCACGAGTGTGAGGCGTGGGTGTCAGTGTTGCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR TCA 90 bp TGCAGCCCCGCAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCACCTCCGCCCTGGTTGGCGACTTTaGCAGCCAAATGCAAGACGA +
Preference number: 4 (lower is better)
Translates to: CSPAVAALAIPRPALHLRPGWRL*QPNARR
Trigger: TCGTCTTGCATTTGGCTGTCAAAGTCGCCAACCAGG...GCGGAGGTGAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGGGGCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR TCA 90 bp GCTCTTCACCTCCGCGATGAGCAGCTTTGTGAGGTCGTGCGGCTCCCCATCATGCCTTCAGCAGCAGCTTaGGGCAGTCGGGCTGGTTGT +
Preference number: 4 (lower is better)
Translates to: ALHLRDEQLCEVVRLPIMPSAAA*GSRAGC
Trigger: ACAACCAGCCCGACTGCCTCAAGCTGCTGCTGAAGG...CATGATGGGGAGCCGCACGACCTCACAAAGCTGCTCATCGCGGAGGTGAAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR TCA 90 bp CCAGCTTTCCACCAAAGGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGGTCAGAGGCTGCCTGGCTaGGGGACCATCTTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: PAFHQRTTPAGPLSYSCGQRLPG*GTIFRA
Trigger: AGCCCTGAAGATGGTCCCTCAGCCAGGCAGCCTCTG...ACCACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR TCA 90 bp CTGATCTGGAAGTCAGTGATGGAGGGCTCTCCTGCCCTTGTGAAGCCCCCAGACCAGAGGCTGCCTGGCTaGGGGACCATCTTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: LIWKSVMEGSPALVKPPDQRLPG*GTIFRA
Trigger: AGCCCTGAAGATGGTCCCTCAGCCAGGCAGCCTCTG...GTCTGGGGGCTTCACAAGGGCAGGAGAGCCCTCCATCACTGACTTCCAGATCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR TCA 90 bp CTTGGCAGGGTCCCTGATCTGGAAGTCAGTGATGGAGGGCTCTCCTGCCCTTGTCAGAGGCTGCCTGGCTaGGGGACCATCTTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: LGRVPDLEVSDGGLSCPCQRLPG*GTIFRA
Trigger: AGCCCTGAAGATGGTCCCTCAGCCAGGCAGCCTCTG...ACAAGGGCAGGAGAGCCCTCCATCACTGACTTCCAGATCAGGGACCCTGCCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR TCA 90 bp AGGCCTGCTCTTCACCTCCGCGATGAGCAGCTTTGTGAGGTCGTGCGGCTCCCCCTCAAGTCCCAGCTCTaGACATTGGGGCCTAGCATG +
Preference number: 4 (lower is better)
Translates to: RPALHLRDEQLCEVVRLPLKSQL*TLGPSM
Trigger: CATGCTAGGCCCCAATGTTCAGAGCTGGGACTTGAG...GGGGAGCCGCACGACCTCACAAAGCTGCTCATCGCGGAGGTGAAGAGCAGGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR TCA 90 bp CAGCTGTGTTGGCCATTGGTGCTCTCTAGTCTCCCCTGCTTGGCTTGGCCCATTGCTCTCCTGCCCTTGTaGAGCCCCCAGACTGACGGG +
Preference number: 4 (lower is better)
Translates to: QLCWPLVLSSLPCLAWPIALLPL*SPQTDG
Trigger: CCCGTCAGTCTGGGGGCTTCACAAGGGCAGGAGAGC...AATGGGCCAAGCCAAGCAGGGGAGACTAGAGAGCACCAATGGCCAACACAGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR GCA 90 bp GCGCACGCCCAGTTCGCGGTGGACGCCCGAGCACTGGATGCAGGTGAGCACGCCTCTTGGAAAAAGTTGTaGTGGGCGTGGAAGAACTTG +
Preference number: 4 (lower is better)
Translates to: AHAQFAVDARALDAGEHASWKKL*WAWKNL
Trigger: CAAGTTCTTCCACGCCCAGCACAACTTTTTCCAAGA...GGCGTGCTCACCTGCATCCAGTGCTCGGGCGTCCACCGCGAACTGGGCGTGCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR GCA 90 bp CAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCACCTCCGCGATGAGCAGCCTCGTGCTCGTCCTCTaGCTGAAAGTGGTACGTCCG +
Preference number: 4 (lower is better)
Translates to: QSQHWLFPGLLFTSAMSSLVLVL*LKVVRP
Trigger: CGGACGTACCACTTTCAGGCAGAGGACGAGCACGAG...GCTGCTCATCGCGGAGGTGAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR GCA 90 bp GCTCTTCACCTCCGCGATGAGCAGCTTTGTGAGGTCGTGCGGCTCCCCATCATGAGCTTTGTGAGGTCGTaGGGCTCCCCATCATGGCCG +
Preference number: 4 (lower is better)
Translates to: ALHLRDEQLCEVVRLPIMSFVRS*GSPSWP
Trigger: CGGCCATGATGGGGAGCCGCACGACCTCACAAAGCT...CATGATGGGGAGCCGCACGACCTCACAAAGCTGCTCATCGCGGAGGTGAAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR GCA 90 bp GTGGGGTCTGCAGCCCCGCAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCAGGTGTGCACCGGCGTaGAAACCTATGCTCCACATA +
Preference number: 4 (lower is better)
Translates to: VGSAAPQSQHWLFPGLLFRCAPA*KPMLHI
Trigger: TATGTGGAGCATAGGTTTGCACGCCGGTGCACACCT...GAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGGGGCTGCAGACCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR GCA 90 bp GTGGGGTCTGCAGCCCCGCAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCACAGGAGGTCCCTGTTaGAAATGGCTGTCCAGAGTC +
Preference number: 4 (lower is better)
Translates to: VGSAAPQSQHWLFPGLLFTGGPC*KWLSRV
Trigger: GACTCTGGACAGCCATTTGCAACAGGGACCTCCTGT...GAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGGGGCTGCAGACCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR GCA 90 bp TCTTTCCTTCTGCCATCCAGAGGCCTGAGGGACAGGGCTGGGACCCACCTTCTCCTTCTGGGCAGAGGCTaGCTGGCTGAGGGACCATCT +
Preference number: 4 (lower is better)
Translates to: SFLLPSRGLRDRAGTHLLLLGRG*LAEGPS
Trigger: AGATGGTCCCTCAGCCAGGCAGCCTCTGCCCAGAAG...GAGAAGGTGGGTCCCAGCCCTGTCCCTCAGGCCTCTGGATGGCAGAAGGAAAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp GTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCACCTCCGCGATGAGCAGCTTCCAAGGCCGGAGCTATaGATTGCCCGCACAGCCTTC +
Preference number: 4 (lower is better)
Translates to: VAALAIPRPALHLRDEQLPRPEL*IARTAF
Trigger: GAAGGCTGTGCGGGCAATCCATAGCTCCGGCCTTGG...AAGCTGCTCATCGCGGAGGTGAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp GACCAGCTTTCCACCAAAGGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGTCCCTCCTGTCACCCTaGCCCGATCGCGCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: DQLSTKGPPLQGPCLTRVSLLSP*PDRAPS
Trigger: AGAAGGAGCGCGATCGGGCCAGGGTGACAGGAGGGA...CACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGCTGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000618240.4
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp GCTCTTCACCTCCGCGATGAGCAGCTTTGTGAGGTCGTGCGGCTCCCCATCATGTCTCTCTGCATGTCCTaGGCCACCTCCCCAGGGATC +
Preference number: 4 (lower is better)
Translates to: ALHLRDEQLCEVVRLPIMSLCMS*ATSPGI
Trigger: GATCCCTGGGGAGGTGGCCCAGGACATGCAGAGAGA...CATGATGGGGAGCCGCACGACCTCACAAAGCTGCTCATCGCGGAGGTGAAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp AGCGCTGGGCTCCCCGAGGAAGGCGCTGCTCAGGGCTTCGTCCTTGCTGTTCTGGCCTTCCAGCCATCTTaGAAAAAGTTGTGCTGGGCG +
Preference number: 4 (lower is better)
Translates to: SAGLPEEGAAQGFVLAVLAFQPS*KKLCWA
Trigger: CGCCCAGCACAACTTTTTCCAAGATGGCTGGAAGGC...CAGAACAGCAAGGACGAAGCCCTGAGCAGCGCCTTCCTCGGGGAGCCCAGCGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR CCA 90 bp CGTGGGGTCTGCAGCCCCGCAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTTTTCTCCTCAGGGTTTaGCCTCACTTGGCACGTCAG +
Preference number: 4 (lower is better)
Translates to: RGVCSPAVAALAIPRPALFLLRV*PHLARQ
Trigger: CTGACGTGCCAAGTGAGGCCAAACCCTGAGGAGAAA...AAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGGGGCTGCAGACCCCACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR CCA 90 bp CAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCACCTCCGCGATGAGCAGCTGGTACGTCCGGTTGTaGGTCACCAGGTCGAAGCAC +
Preference number: 4 (lower is better)
Translates to: QSQHWLFPGLLFTSAMSSWYVRL*VTRSKH
Trigger: GTGCTTCGACCTGGTGACCCACAACCGGACGTACCA...GCTGCTCATCGCGGAGGTGAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR CCA 90 bp TTCCCAGGCCTGCTCTTCACCTCCGCGATGAGCAGCTTTGTGAGGTCGTGCGGCTGGTACGTCCGGTTGTaGGTCACCAGGTCGAAGCAC +
Preference number: 4 (lower is better)
Translates to: FPGLLFTSAMSSFVRSCGWYVRL*VTRSKH
Trigger: GTGCTTCGACCTGGTGACCCACAACCGGACGTACCA...GCCGCACGACCTCACAAAGCTGCTCATCGCGGAGGTGAAGAGCAGGCCTGGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR CCA 90 bp CCTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCACAGCCCGCAGTCGCAGCACTaGCTATTCCCAGGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: PVPVGTTDQSGLQGKQHSPQSQH*LFPGLL
Trigger: GAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGG...GCTGTGCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR CCA 90 bp CAAAGTCCTGCCCATTGGCAAAGGCCTCCAGTACCGACAGGAGGTCCCTGTTGCCCGCAGTCGCAGCACTaGCTATTCCCAGGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: QSPAHWQRPPVPTGGPCCPQSQH*LFPGLL
Trigger: GAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGG...GCAACAGGGACCTCCTGTCGGTACTGGAGGCCTTTGCCAATGGGCAGGACTTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp GCTTTCCACCAAAGGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGGTATCACGCCCAGTTCGCGGTaGACGCCCGAGCACTGGATG +
Preference number: 4 (lower is better)
Translates to: AFHQRTTPAGPLSYSCGITPSSR*TPEHWM
Trigger: CATCCAGTGCTCGGGCGTCCACCGCGAACTGGGCGT...GATACCACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR CCA 90 bp CAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCACCTCCGCGATGAGCAGCCCGTGTGAGGGTAGCTaGGCCTCCATGACCTCATTG +
Preference number: 4 (lower is better)
Translates to: QSQHWLFPGLLFTSAMSSPCEGS*ASMTSL
Trigger: CAATGAGGTCATGGAGGCCCAGCTACCCTCACACGG...GCTGCTCATCGCGGAGGTGAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp TCTCGATCTGATGAGGGACTGAGAGTTCTGCAGCTGAAGCCAGCTCAGGAGCACTGTCCAGCCTCCCACTaGCCCAGTGAGCCTGGGCCG +
Preference number: 4 (lower is better)
Translates to: SRSDEGLRVLQLKPAQEHCPASH*PSEPGP
Trigger: CGGCCCAGGCTCACTGGGCCAGTGGGAGGCTGGACA...GTGCTCCTGAGCTGGCTTCAGCTGCAGAACTCTCAGTCCCTCATCAGATCGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
ENST00000635461.1
CDS-3UTR CCA 90 bp CCAGCGCTGGGCTCCCCGAGGAAGGCGCTGCTCAGGGCTTCGTCCTTGCTGTTCCAGAACGATCTCCACTaGCATGTCTTGCACACCCTT +
Preference number: 4 (lower is better)
Translates to: PALGSPRKALLRASSLLFQNDLH*HVLHTL
Trigger: AAGGGTGTGCAAGACATGCCAGTGGAGATCGTTCTG...GAACAGCAAGGACGAAGCCCTGAGCAGCGCCTTCCTCGGGGAGCCCAGCGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp AGGGCTCCCAGGCCCCTAGCGGGTAATGAGATAGGAAAGAACCGCCATCAGTCCTGGGTGGGGCTTGGCTaGGATCCCCAGGTTCCAAGG +
Preference number: 4 (lower is better)
Translates to: RAPRPLAGNEIGKNRHQSWVGLG*DPQVPR
Trigger: CCTTGGAACCTGGGGATCCCAGCCAAGCCCCACCCA...GGACTGATGGCGGTTCTTTCCTATCTCATTACCCGCTAGGGGCCTGGGAGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
ENST00000635461.1
CDS-3UTR CCA 90 bp TCCAGCCACAGGGCTCCCAGGCCCCTAGCGGGTAATGAGATAGGAAAGAACCGCCTCTTCAGAGTTGGGTaGGGCTTGGCTGGGATCCCC +
Preference number: 4 (lower is better)
Translates to: SSHRAPRPLAGNEIGKNRLFRVG*GLAGIP
Trigger: GGGGATCCCAGCCAAGCCCCACCCAACTCTGAAGAG...GCGGTTCTTTCCTATCTCATTACCCGCTAGGGGCCTGGGAGCCCTGTGGCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635461.1
ENST00000635693.1
CDS-3UTR CCA 90 bp TCCAGCCACAGGGCTCCCAGGCCCCTAGCGGGTAATGAGATAGGAAAGAACCGCGGCCCTCTTCAGAGTTaGGTGGGGCTTGGCTGGGAT +
Preference number: 4 (lower is better)
Translates to: SSHRAPRPLAGNEIGKNRGPLQS*VGLGWD
Trigger: ATCCCAGCCAAGCCCCACCCAACTCTGAAGAGGGCC...GCGGTTCTTTCCTATCTCATTACCCGCTAGGGGCCTGGGAGCCCTGTGGCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635461.1
ENST00000635693.1
CDS-3UTR CCA 90 bp AGGGCTCCCAGGCCCCTAGCGGGTAATGAGATAGGAAAGAACCGCCATCAGTCCATGTCAGGCTGGGTCTaGAGGTGCCTGGGGGCTCTC +
Preference number: 4 (lower is better)
Translates to: RAPRPLAGNEIGKNRHQSMSGWV*RCLGAL
Trigger: GAGAGCCCCCAGGCACCTCCAGACCCAGCCTGACAT...GGACTGATGGCGGTTCTTTCCTATCTCATTACCCGCTAGGGGCCTGGGAGCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635461.1
ENST00000635693.1
CDS-3UTR CCA 90 bp GACCAGCTTTCCACCAAAGGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGATGTCAGGCTGGGTCTaGAGGTGCCTGGGGGCTCTC +
Preference number: 4 (lower is better)
Translates to: DQLSTKGPPLQGPCLTRVMSGWV*RCLGAL
Trigger: GAGAGCCCCCAGGCACCTCCAGACCCAGCCTGACAT...CACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGCTGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp TCCAGCCACAGGGCTCCCAGGCCCCTAGCGGGTAATGAGATAGGAAAGAACCGCACATCTCCGAAGGGGTaGTCCCGGATGTCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: SSHRAPRPLAGNEIGKNRTSPKG*SRMSGW
Trigger: CCAGCCTGACATCCGGGACCACCCCTTCGGAGATGT...GCGGTTCTTTCCTATCTCATTACCCGCTAGGGGCCTGGGAGCCCTGTGGCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635461.1
ENST00000635693.1
CDS-3UTR CCA 90 bp TCCAGCCACAGGGCTCCCAGGCCCCTAGCGGGTAATGAGATAGGAAAGAACCGCTGGGCAGAGGCTGCCTaGCTGAGGGACCATCTTCAG +
Preference number: 4 (lower is better)
Translates to: SSHRAPRPLAGNEIGKNRWAEAA*LRDHLQ
Trigger: CTGAAGATGGTCCCTCAGCCAGGCAGCCTCTGCCCA...GCGGTTCTTTCCTATCTCATTACCCGCTAGGGGCCTGGGAGCCCTGTGGCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635461.1
ENST00000635693.1
CDS-3UTR CCA 90 bp ACCGCCATCAGTCCTAACAGGGAAAGGCCATGTGTCCTTGGTAGAGGCATGGCCCCGGCACGTTCCTTCTaGGCAGAGGCTGCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: TAISPNRERPCVLGRGMAPARSF*AEAAWL
Trigger: CAGCCAGGCAGCCTCTGCCCAGAAGGAACGTGCCGG...GGCCATGCCTCTACCAAGGACACATGGCCTTTCCCTGTTAGGACTGATGGCGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000492982.6
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635461.1
ENST00000635693.1
CDS-3UTR CCA 90 bp CTCCCAGTCCTTGAGCCATCTCCTTCAGTGATGCCAACCGGCACGTTCCTTCTGCCGGCACGTTCCTTCTaGGCAGAGGCTGCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: LPVLEPSPSVMPTGTFLLPARSF*AEAAWL
Trigger: CAGCCAGGCAGCCTCTGCCCAGAAGGAACGTGCCGG...CAGAAGGAACGTGCCGGTTGGCATCACTGAAGGAGATGGCTCAAGGACTGGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000492982.6
ENST00000618240.4
ENST00000634705.1
ENST00000635693.1
CDS-3UTR CCA 90 bp GAGGGACTGAGAGTTCTGCAGCTGAAGCCAGCTCAGGAGCACTCAGATCCAGCCCATTGGGGCCTAGCATaGGGCATGTGGGGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: EGLRVLQLKPAQEHSDPAHWGLA*GMWGPA
Trigger: TGCTGGCCCCCACATGCCCCATGCTAGGCCCCAATG...GGCTGGATCTGAGTGCTCCTGAGCTGGCTTCAGCTGCAGAACTCTCAGTCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635461.1
ENST00000635693.1
CDS-3UTR CCA 90 bp CTTGGCAGGGTCCCTGATCTGGAAGTCAGTGATGGAGGGCTCTCCTGCCCTTGTCATTGGGGCCTAGCATaGGGCATGTGGGGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: LGRVPDLEVSDGGLSCPCHWGLA*GMWGPA
Trigger: TGCTGGCCCCCACATGCCCCATGCTAGGCCCCAATG...ACAAGGGCAGGAGAGCCCTCCATCACTGACTTCCAGATCAGGGACCCTGCCAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp GCCAACCAAAGCTCTCCCCTTCAGCAGCAGCTTGAGGCAGTCGGGCTGGTTGTACATTGGGGCCTAGCATaGGGCATGTGGGGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: ANQSSPLQQQLEAVGLVVHWGLA*GMWGPA
Trigger: TGCTGGCCCCCACATGCCCCATGCTAGGCCCCAATG...TACAACCAGCCCGACTGCCTCAAGCTGCTGCTGAAGGGGAGAGCTTTGGTTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp GGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGGTATCTGAAGTGCCTAACCTCCCCTGCTTGGCTTaGCCCATTCCTGCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: GPPLQGPCLTRVVSEVPNLPCLA*PIPARA
Trigger: GGCCCTGGCAGGAATGGGCCAAGCCAAGCAGGGGAG...GTTAGGCACTTCAGATACCACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp GGTCTGCAGCCCCGCAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCACCTCTCTGCAGGATGGCTTaGTCTCCTTCCAAGATCGGG +
Preference number: 4 (lower is better)
Translates to: GLQPRSRSTGYSQACSSPLCRMA*SPSKIG
Trigger: CCCGATCTTGGAAGGAGACCAAGCCATCCTGCAGAG...AGGTGAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGGGGCTGCAGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp CCCACTGGCCCAGTGAGCCTGGGCCGGGAGCTTCAGCAAGCAGCGCTTCTCTTCCAGGTGGGTTATAAGTaGCCCTTGGAGGGGTTCTCA +
Preference number: 4 (lower is better)
Translates to: PTGPVSLGRELQQAALLFQVGYK*PLEGFS
Trigger: TGAGAACCCCTCCAAGGGCCACTTATAACCCACCTG...GAAGAGAAGCGCTGCTTGCTGAAGCTCCCGGCCCAGGCTCACTGGGCCAGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484418.1
ENST00000635167.1
CDS-3UTR TCA 90 bp AGCAGGTCCAAGGTGAGTGACTGCATGCGCGAAAAGCGCACGCCCAGTTCGCGGGCTATAGCCACATCCTaGGTTCTTCCGGCTCAGGTG +
Preference number: 4 (lower is better)
Translates to: SRSKVSDCMREKRTPSSRAIATS*VLPAQV
Trigger: CACCTGAGCCGGAAGAACTCAGGATGTGGCTATAGC...CCGCGAACTGGGCGTGCGCTTTTCGCGCATGCAGTCACTCACCTTGGACCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR TCA 90 bp GCGCGAAAAGCGCACGCCCAGTTCGCGGTGGACGCCCGAGCACTGGATGCAGGTTCAGGCAGCCATACTTaGCTCCACACTTCCTTTTCT +
Preference number: 4 (lower is better)
Translates to: ARKAHAQFAVDARALDAGSGSHT*LHTSFS
Trigger: AGAAAAGGAAGTGTGGAGTCAAGTATGGCTGCCTGA...ACCTGCATCCAGTGCTCGGGCGTCCACCGCGAACTGGGCGTGCGCTTTTCGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR TCA 90 bp CGCCTCACACTCGTGCTCGTCCTCTGCCTGAAAGTGGTACGTCCGGTTGTGGGTGCTGTTCTGCAACACTaGCACCCACGCCTCACACTC +
Preference number: 4 (lower is better)
Translates to: RLTLVLVLCLKVVRPVVGAVLQH*HPRLTL
Trigger: GAGTGTGAGGCGTGGGTGTCAGTGTTGCAGAACAGC...ACCCACAACCGGACGTACCACTTTCAGGCAGAGGACGAGCACGAGTGTGAGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR TCA 90 bp CAGAGCCGTGTTCCCGTCAGCAGCCTTGGCATCCAGGTGACCACCGTTCTGGATCAGGTCCAAGGTGAGTaGCTGCATGCGCGAAAAGCG +
Preference number: 4 (lower is better)
Translates to: QSRVPVSSLGIQVTTVLDQVQGE*LHARKA
Trigger: CGCTTTTCGCGCATGCAGTCACTCACCTTGGACCTG...ATCCAGAACGGTGGTCACCTGGATGCCAAGGCTGCTGACGGGAACACGGCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
CDS-3UTR TCA 90 bp CTCGTGCTCGTCCTCTGCCTGAAAGTGGTACGTCCGGTTGTGGGTCACCAGGTCCCAGCAGGTCCAAGGTaGGTGACTGCATGCGCGAAA +
Preference number: 4 (lower is better)
Translates to: LVLVLCLKVVRPVVGHQVPAGPR*VTACAK
Trigger: TTTCGCGCATGCAGTCACTCACCTTGGACCTGCTGG...GACCTGGTGACCCACAACCGGACGTACCACTTTCAGGCAGAGGACGAGCACGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR TCA 90 bp AGGGTCCCTGATCTGGAAGTCAGTGATGGAGGGCTCTCCTGCCCTTGTGAAGCCCATGTCACTCTCAGCTaGGGGTTTAGGGCCGCCGTG +
Preference number: 4 (lower is better)
Translates to: RVPDLEVSDGGLSCPCEAHVTLS*GFRAAV
Trigger: CACGGCGGCCCTAAACCCTCAGCTGAGAGTGACATG...GGCTTCACAAGGGCAGGAGAGCCCTCCATCACTGACTTCCAGATCAGGGACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR TCA 90 bp TGCCCTTGTGAAGCCCCCAGACTGACGGGGGAAATAGAGTCTCGATCTGATGAGGCTGTCCAGAGTCGCTaGGGCTCAGGTGTGCACCGG +
Preference number: 4 (lower is better)
Translates to: CPCEAPRLTGEIESRSDEAVQSR*GSGVHR
Trigger: CCGGTGCACACCTGAGCCTCAGCGACTCTGGACAGC...CTCATCAGATCGAGACTCTATTTCCCCCGTCAGTCTGGGGGCTTCACAAGGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR TCA 90 bp TCTTCCTGGCTATGTCCAGAGCTGTCTCGCCTGCTTCATTTACTGTGCCAACCACTCCCACTGGCCCAGTaGGCCTGGGCCGGGAGCTTC +
Preference number: 4 (lower is better)
Translates to: SSWLCPELSRLLHLLCQPLPLAQ*AWAGSF
Trigger: GAAGCTCCCGGCCCAGGCTCACTGGGCCAGTGGGAG...TGGTTGGCACAGTAAATGAAGCAGGCGAGACAGCTCTGGACATAGCCAGGAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
CDS-3UTR TCA 90 bp CAGGCTCTGTGGAAATTACCCAGGAGTAGTCCACATGTAGAGGGAAGGCAAAGGCTCCCACTGGCCCAGTaGGCCTGGGCCGGGAGCTTC +
Preference number: 4 (lower is better)
Translates to: QALWKLPRSSPHVEGRQRLPLAQ*AWAGSF
Trigger: GAAGCTCCCGGCCCAGGCTCACTGGGCCAGTGGGAG...CCTTTGCCTTCCCTCTACATGTGGACTACTCCTGGGTAATTTCCACAGAGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
CDS-3UTR TCA 90 bp GGCTATGTCCAGAGCTGTCTCGCCTGCTTCATTTACTGTGCCAACCAAAGCTCTCTCCCACTGGCCCAGTaGGCCTGGGCCGGGAGCTTC +
Preference number: 4 (lower is better)
Translates to: GYVQSCLACFIYCANQSSLPLAQ*AWAGSF
Trigger: GAAGCTCCCGGCCCAGGCTCACTGGGCCAGTGGGAG...AGAGCTTTGGTTGGCACAGTAAATGAAGCAGGCGAGACAGCTCTGGACATAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
CDS-3UTR TCA 90 bp AAAGAACCGCCATCAGTCCTAACAGGGAAAGGCCATGTGTCCTTGGTAGAGGCACTCCCACTGGCCCAGTaGGCCTGGGCCGGGAGCTTC +
Preference number: 4 (lower is better)
Translates to: KEPPSVLTGKGHVSLVEALPLAQ*AWAGSF
Trigger: GAAGCTCCCGGCCCAGGCTCACTGGGCCAGTGGGAG...TGCCTCTACCAAGGACACATGGCCTTTCCCTGTTAGGACTGATGGCGGTTCTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000492982.6
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635461.1
CDS-3UTR TCA 90 bp TCCAGCCACAGGGCTCCCAGGCCCCTAGCGGGTAATGAGATAGGAAAGAACCGCTCCGAGAAGAGTTTTTaGCTGGCAAGGGCGGGGGAC +
Preference number: 4 (lower is better)
Translates to: SSHRAPRPLAGNEIGKNRSEKSF*LARAGD
Trigger: GTCCCCCGCCCTTGCCAGTCAAAAACTCTTCTCGGA...GCGGTTCTTTCCTATCTCATTACCCGCTAGGGGCCTGGGAGCCCTGTGGCTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR TCA 90 bp CAAAGTCCTGCCCATTGGCAAAGGCCTCCAGTACCGACAGGAGGTCCCTGTTGCGGTCTCAGGGGCCTCTaGACTCAGGCTGGAGACTTC +
Preference number: 4 (lower is better)
Translates to: QSPAHWQRPPVPTGGPCCGLRGL*TQAGDF
Trigger: GAAGTCTCCAGCCTGAGTTCAGAGGCCCCTGAGACC...GCAACAGGGACCTCCTGTCGGTACTGGAGGCCTTTGCCAATGGGCAGGACTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR TCA 90 bp CCACGGCCTCTCGGTACTGCTCTTCATTCTCCACATGGCCAAGGCCGGAGCTATGGTCTCAGGGGCCTCTaGACTCAGGCTGGAGACTTC +
Preference number: 4 (lower is better)
Translates to: PRPLGTALHSPHGQGRSYGLRGL*TQAGDF
Trigger: GAAGTCTCCAGCCTGAGTTCAGAGGCCCCTGAGACC...ATAGCTCCGGCCTTGGCCATGTGGAGAATGAAGAGCAGTACCGAGAGGCCGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR TCA 90 bp ACCGCCATCAGTCCTAACAGGGAAAGGCCATGTGTCCTTGGTAGAGGCATGGCCCAGAGGCTGCCTGGCTaGGGGACCATCTTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: TAISPNRERPCVLGRGMAQRLPG*GTIFRA
Trigger: AGCCCTGAAGATGGTCCCTCAGCCAGGCAGCCTCTG...GGCCATGCCTCTACCAAGGACACATGGCCTTTCCCTGTTAGGACTGATGGCGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000492982.6
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635461.1
ENST00000635693.1
CDS-3UTR TCA 90 bp GCTTTCCACCAAAGGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGGTATCCAGAGGCTGCCTGGCTaGGGGACCATCTTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: AFHQRTTPAGPLSYSCGIQRLPG*GTIFRA
Trigger: AGCCCTGAAGATGGTCCCTCAGCCAGGCAGCCTCTG...GATACCACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR TCA 90 bp CATGTAGAGGGAAGGCAAAGGTCCCCGCCTGGGCCTGCTCCAGCAGCTCCTCACTGCCACTCTGATGGGTaGGATCTGAGCAGATGTCAG +
Preference number: 4 (lower is better)
Translates to: HVEGRQRSPPGPAPAAPHCHSDG*DLSRCQ
Trigger: CTGACATCTGCTCAGATCTCACCCATCAGAGTGGCA...GTGAGGAGCTGCTGGAGCAGGCCCAGGCGGGGACCTTTGCCTTCCCTCTACATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484418.1
ENST00000635167.1
CDS-3UTR GCA 90 bp GGCCTGCTCTTCACCTCCGCGATGAGCAGCTTTGTGAGGTCGTGCGGCTCCCCAGCCGGAGCTATGGATTaGCCGCACAGCCTTCTTTAT +
Preference number: 4 (lower is better)
Translates to: GLLFTSAMSSFVRSCGSPAGAMD*PHSLLY
Trigger: ATAAAGAAGGCTGTGCGGGCAATCCATAGCTCCGGC...TGGGGAGCCGCACGACCTCACAAAGCTGCTCATCGCGGAGGTGAAGAGCAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR GCA 90 bp AGGGTCCCTGATCTGGAAGTCAGTGATGGAGGGCTCTCCTGCCCTTGTGAAGCCCGACCGTCCCTCAGCTaGCCCTTCATCAGACTGTCC +
Preference number: 4 (lower is better)
Translates to: RVPDLEVSDGGLSCPCEARPSLS*PFIRLS
Trigger: GGACAGTCTGATGAAGGGGCAGCTGAGGGACGGTCG...GGCTTCACAAGGGCAGGAGAGCCCTCCATCACTGACTTCCAGATCAGGGACCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000618240.4
ENST00000634561.2
ENST00000635693.1
CDS-3UTR GCA 90 bp GTGGGGTCTGCAGCCCCGCAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCCTTGGTGCTGGTGGATaGTATAGCCACATCCTGAGT +
Preference number: 4 (lower is better)
Translates to: VGSAAPQSQHWLFPGLLFLGAGG*YSHILS
Trigger: ACTCAGGATGTGGCTATAGCATCCACCAGCACCAAG...GAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGGGGCTGCAGACCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR GCA 90 bp GGTCTGCAGCCCCGCAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCACCTTCCCAAACTGCTTGTTaGCTTGGTGCTGGTGGATGC +
Preference number: 4 (lower is better)
Translates to: GLQPRSRSTGYSQACSSPSQTAC*LGAGGC
Trigger: GCATCCACCAGCACCAAGGCAACAAGCAGTTTGGGA...AGGTGAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGGGGCTGCAGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR GCA 90 bp CAAGCCCAACCCTTAAGACCAGCTTTCCACCAAAGGACCACCCCTGCAGGGCCCCTCGTGCTCGTCCTCTaGCTGAAAGTGGTACGTCCG +
Preference number: 4 (lower is better)
Translates to: QAQPLRPAFHQRTTPAGPLVLVL*LKVVRP
Trigger: CGGACGTACCACTTTCAGGCAGAGGACGAGCACGAG...GGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGCTGGTCTTAAGGGTTGGGCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR GCA 90 bp TCTTTCCTTCTGCCATCCAGAGGCCTGAGGGACAGGGCTGGGACCCACCTTCTCCTCGTGCTCGTCCTCTaGCTGAAAGTGGTACGTCCG +
Preference number: 4 (lower is better)
Translates to: SFLLPSRGLRDRAGTHLLLVLVL*LKVVRP
Trigger: CGGACGTACCACTTTCAGGCAGAGGACGAGCACGAG...GAGAAGGTGGGTCCCAGCCCTGTCCCTCAGGCCTCTGGATGGCAGAAGGAAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR GCA 90 bp CGCCTCACACTCGTGCTCGTCCTCTGCCTGAAAGTGGTACGTCCGGTTGTGGGTCTCGTGCTCGTCCTCTaGCTGAAAGTGGTACGTCCG +
Preference number: 4 (lower is better)
Translates to: RLTLVLVLCLKVVRPVVGLVLVL*LKVVRP
Trigger: CGGACGTACCACTTTCAGGCAGAGGACGAGCACGAG...ACCCACAACCGGACGTACCACTTTCAGGCAGAGGACGAGCACGAGTGTGAGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR GCA 90 bp CAGAGCCGTGTTCCCGTCAGCAGCCTTGGCATCCAGGTGACCACCGTTCTGGATTGTAGTCCCTGCGGGTaGCCATGTCACTCTCAGCTG +
Preference number: 4 (lower is better)
Translates to: QSRVPVSSLGIQVTTVLDCSPCG*PCHSQL
Trigger: CAGCTGAGAGTGACATGGGCACCCGCAGGGACTACA...ATCCAGAACGGTGGTCACCTGGATGCCAAGGCTGCTGACGGGAACACGGCTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
CDS-3UTR GCA 90 bp CAAGCCCAACCCTTAAGACCAGCTTTCCACCAAAGGACCACCCCTGCAGGGCCCTGTAGTCCCTGCGGGTaGCCATGTCACTCTCAGCTG +
Preference number: 4 (lower is better)
Translates to: QAQPLRPAFHQRTTPAGPCSPCG*PCHSQL
Trigger: CAGCTGAGAGTGACATGGGCACCCGCAGGGACTACA...GGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGCTGGTCTTAAGGGTTGGGCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR GCA 90 bp TGCAGCCCCGCAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCACCTCCGCCGGCGTGCAAACCTATaGTCCACATACTTGGCCATA +
Preference number: 4 (lower is better)
Translates to: CSPAVAALAIPRPALHLRRRANL*STYLAI
Trigger: TATGGCCAAGTATGTGGAGCATAGGTTTGCACGCCG...GCGGAGGTGAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGGGGCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR GCA 90 bp CAAGCCCAACCCTTAAGACCAGCTTTCCACCAAAGGACCACCCCTGCAGGGCCCGGCTGTCCAAAGTCCTaGCCATTGGCAAAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: QAQPLRPAFHQRTTPAGPGCPKS*PLAKAS
Trigger: GGAGGCCTTTGCCAATGGGCAGGACTTTGGACAGCC...GGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGCTGGTCTTAAGGGTTGGGCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR GCA 90 bp AGGGTCCCTGATCTGGAAGTCAGTGATGGAGGGCTCTCCTGCCCTTGTGAAGCCTTCTTCAGGTGCCTGTaGATCAGGCCCTGGCAGCGG +
Preference number: 4 (lower is better)
Translates to: RVPDLEVSDGGLSCPCEAFFRCL*IRPWQR
Trigger: CCGCTGCCAGGGCCTGATGCACAGGCACCTGAAGAA...GGCTTCACAAGGGCAGGAGAGCCCTCCATCACTGACTTCCAGATCAGGGACCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR GCA 90 bp GAGGGACTGAGAGTTCTGCAGCTGAAGCCAGCTCAGGAGCACTCAGATCCAGCCTTCTTCAGGTGCCTGTaGATCAGGCCCTGGCAGCGG +
Preference number: 4 (lower is better)
Translates to: EGLRVLQLKPAQEHSDPAFFRCL*IRPWQR
Trigger: CCGCTGCCAGGGCCTGATGCACAGGCACCTGAAGAA...GGCTGGATCTGAGTGCTCCTGAGCTGGCTTCAGCTGCAGAACTCTCAGTCCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR GCA 90 bp GCACTGGCTATTCCCAGGCCTGCTCTTCACCTCCGCGATGAGCAGCTTTGTGAGTTCTTCAGGTGCCTGTaGATCAGGCCCTGGCAGCGG +
Preference number: 4 (lower is better)
Translates to: ALAIPRPALHLRDEQLCEFFRCL*IRPWQR
Trigger: CCGCTGCCAGGGCCTGATGCACAGGCACCTGAAGAA...CTCACAAAGCTGCTCATCGCGGAGGTGAAGAGCAGGCCTGGGAATAGCCAGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR GCA 90 bp TCAGGGTTTGGCCTCACTTGGCACGTCAGCAGGGTCAGCTTCACCGGGGGCCGGCAGAGCTGTCTCGCCTaGTTCATTTACTGTGCCAAC +
Preference number: 4 (lower is better)
Translates to: SGFGLTWHVSRVSFTGGRQSCLA*FIYCAN
Trigger: GTTGGCACAGTAAATGAAGCAGGCGAGACAGCTCTG...CCGGCCCCCGGTGAAGCTGACCCTGCTGACGTGCCAAGTGAGGCCAAACCCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR GCA 90 bp AGCCCACTTTCTCCGTCCCAAACTGCTTGTTGCCTTGGTGCTGGTGGATGCTATGTCCCCGCCTGGGCCTaGTCCAGCAGCTCCTCACAC +
Preference number: 4 (lower is better)
Translates to: SPLSPSQTACCLGAGGCYVPAWA*SSSSSH
Trigger: GTGTGAGGAGCTGCTGGAGCAGGCCCAGGCGGGGAC...ATAGCATCCACCAGCACCAAGGCAACAAGCAGTTTGGGACGGAGAAAGTGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR GCA 90 bp CCTCATCCTCCTCACTGTCAGAGCCAGGCTCTGTGGAAATTACCCAGGAGTAGTGTCCCCGCCTGGGCCTaGTCCAGCAGCTCCTCACAC +
Preference number: 4 (lower is better)
Translates to: PHPPHCQSQALWKLPRSSVPAWA*SSSSSH
Trigger: GTGTGAGGAGCTGCTGGAGCAGGCCCAGGCGGGGAC...ACTACTCCTGGGTAATTTCCACAGAGCCTGGCTCTGACAGTGAGGAGGATGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
CDS-3UTR GCA 90 bp CACCTCCGCGATGAGCAGCTTTGTGAGGTCGTGCGGCTCCCCATCATGGCCGGCTCCACTGGCATGTCTTaGACACCCTTGGACCAAAGT +
Preference number: 4 (lower is better)
Translates to: HLRDEQLCEVVRLPIMAGSTGMS*TPLDQS
Trigger: ACTTTGGTCCAAGGGTGTGCAAGACATGCCAGTGGA...GCCGGCCATGATGGGGAGCCGCACGACCTCACAAAGCTGCTCATCGCGGAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR GCA 90 bp AGGTATAAACCAGCTGAGTCCAGAGCCATGCCCTGGAATCTGACCCTGCCTATTGGCTGGGTCTGGAGGTaGCTGGGGGCTCTCGGAGGC +
Preference number: 4 (lower is better)
Translates to: RYKPAESRAMPWNLTLPIGWVWR*LGALGG
Trigger: GCCTCCGAGAGCCCCCAGGCACCTCCAGACCCAGCC...AATAGGCAGGGTCAGATTCCAGGGCATGGCTCTGGACTCAGCTGGTTTATACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR GCA 90 bp CAGTCCCTACTTGGCAGGGTCCCTGATCTGGAAGTCAGTGATGGAGGGCTCTCCCTTCTGGGCAGAGGCTaGCTGGCTGAGGGACCATCT +
Preference number: 4 (lower is better)
Translates to: QSLLGRVPDLEVSDGGLSLLGRG*LAEGPS
Trigger: AGATGGTCCCTCAGCCAGGCAGCCTCTGCCCAGAAG...GGAGAGCCCTCCATCACTGACTTCCAGATCAGGGACCCTGCCAAGTAGGGACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR GCA 90 bp CTTGGCAGGGTCCCTGATCTGGAAGTCAGTGATGGAGGGCTCTCCTGCCCTTGTGATGGAGGGCTCTCCTaGCCTTGTGAAGCCCCCAGA +
Preference number: 4 (lower is better)
Translates to: LGRVPDLEVSDGGLSCPCDGGLS*PCEAPR
Trigger: TCTGGGGGCTTCACAAGGGCAGGAGAGCCCTCCATC...ACAAGGGCAGGAGAGCCCTCCATCACTGACTTCCAGATCAGGGACCCTGCCAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR GCA 90 bp GAGGGACTGAGAGTTCTGCAGCTGAAGCCAGCTCAGGAGCACTCAGATCCAGCCGATGGAGGGCTCTCCTaGCCTTGTGAAGCCCCCAGA +
Preference number: 4 (lower is better)
Translates to: EGLRVLQLKPAQEHSDPADGGLS*PCEAPR
Trigger: TCTGGGGGCTTCACAAGGGCAGGAGAGCCCTCCATC...GGCTGGATCTGAGTGCTCCTGAGCTGGCTTCAGCTGCAGAACTCTCAGTCCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp GACCAGCTTTCCACCAAAGGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGCCAAGGCCGGAGCTATaGATTGCCCGCACAGCCTTC +
Preference number: 4 (lower is better)
Translates to: DQLSTKGPPLQGPCLTRVPRPEL*IARTAF
Trigger: GAAGGCTGTGCGGGCAATCCATAGCTCCGGCCTTGG...CACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGCTGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000618240.4
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp CAGCTGTGTTGGCCATTGGTGCTCTCTAGTCTCCCCTGCTTGGCTTGGCCCATTTCCCTCCTGTCACCCTaGCCCGATCGCGCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: QLCWPLVLSSLPCLAWPISLLSP*PDRAPS
Trigger: AGAAGGAGCGCGATCGGGCCAGGGTGACAGGAGGGA...AATGGGCCAAGCCAAGCAGGGGAGACTAGAGAGCACCAATGGCCAACACAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000618240.4
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp ACAACCCTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCTCCCTCCTGTCACCCTaGCCCGATCGCGCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: TTLFLWEPQTSQVSRGNSSLLSP*PDRAPS
Trigger: AGAAGGAGCGCGATCGGGCCAGGGTGACAGGAGGGA...GCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAGGGTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000618240.4
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp CCAGCTTTCCACCAAAGGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGGTTCTCTCTGCATGTCCTaGGCCACCTCCCCAGGGATC +
Preference number: 4 (lower is better)
Translates to: PAFHQRTTPAGPLSYSCGSLCMS*ATSPGI
Trigger: GATCCCTGGGGAGGTGGCCCAGGACATGCAGAGAGA...ACCACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR CCA 90 bp CTGCAGCCCCGCAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCACCTCCGAAGTTGTGCTGGGCGTaGAAGAACTTGATGAGGCTC +
Preference number: 4 (lower is better)
Translates to: LQPRSRSTGYSQACSSPPKLCWA*KNLMRL
Trigger: GAGCCTCATCAAGTTCTTCCACGCCCAGCACAACTT...CGGAGGTGAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGGGGCTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR CCA 90 bp GGTCTGCAGCCCCGCAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCACCTGCCTTCCAGCCATCTTaGAAAAAGTTGTGCTGGGCG +
Preference number: 4 (lower is better)
Translates to: GLQPRSRSTGYSQACSSPAFQPS*KKLCWA
Trigger: CGCCCAGCACAACTTTTTCCAAGATGGCTGGAAGGC...AGGTGAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGGGGCTGCAGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR CCA 90 bp GCACTGGCTATTCCCAGGCCTGCTCTTCACCTCCGCGATGAGCAGCTTTGTGAGAGGGAGTCCCGGAGCTaGGTCAGCTTCTGTAGCTCG +
Preference number: 4 (lower is better)
Translates to: ALAIPRPALHLRDEQLCERESRS*VSFCSS
Trigger: CGAGCTACAGAAGCTGACCCAGCTCCGGGACTCCCT...CTCACAAAGCTGCTCATCGCGGAGGTGAAGAGCAGGCCTGGGAATAGCCAGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR CCA 90 bp CCAGCTTTCCACCAAAGGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGGTAGGGAGTCCCGGAGCTaGGTCAGCTTCTGTAGCTCG +
Preference number: 4 (lower is better)
Translates to: PAFHQRTTPAGPLSYSCGRESRS*VSFCSS
Trigger: CGAGCTACAGAAGCTGACCCAGCTCCGGGACTCCCT...ACCACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR CCA 90 bp TGTTCTGCAACACTGACACCCACGCCTCACACTCGTGCTCGTCCTCTGCCTGAACCGCAGTCGCAGCACTaGCTATTCCCAGGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: CSATLTPTPHTRARPLPEPQSQH*LFPGLL
Trigger: GAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGG...TTCAGGCAGAGGACGAGCACGAGTGTGAGGCGTGGGTGTCAGTGTTGCAGAACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR CCA 90 bp CTTGGCAGGGTCCCTGATCTGGAAGTCAGTGATGGAGGGCTCTCCTGCCCTTGTCTGTGCATCAGGCCCTaGCAGCGGCTGTCCAAAGTC +
Preference number: 4 (lower is better)
Translates to: LGRVPDLEVSDGGLSCPCLCIRP*QRLSKV
Trigger: GACTTTGGACAGCCGCTGCCAGGGCCTGATGCACAG...ACAAGGGCAGGAGAGCCCTCCATCACTGACTTCCAGATCAGGGACCCTGCCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CCA 90 bp GACCAGCTTTCCACCAAAGGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGCTGTGCATCAGGCCCTaGCAGCGGCTGTCCAAAGTC +
Preference number: 4 (lower is better)
Translates to: DQLSTKGPPLQGPCLTRVLCIRP*QRLSKV
Trigger: GACTTTGGACAGCCGCTGCCAGGGCCTGATGCACAG...CACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGCTGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CCA 90 bp CAAAGTCCTGCCCATTGGCAAAGGCCTCCAGTACCGACAGGAGGTCCCTGTTGCTCCCGTCAGCAGCCTTaGCATCCAGGTGACCACCGT +
Preference number: 4 (lower is better)
Translates to: QSPAHWQRPPVPTGGPCCSRQQP*HPGDHR
Trigger: ACGGTGGTCACCTGGATGCCAAGGCTGCTGACGGGA...GCAACAGGGACCTCCTGTCGGTACTGGAGGCCTTTGCCAATGGGCAGGACTTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp CCAGCTTTCCACCAAAGGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGGTTCCCGTCAGCAGCCTTaGCATCCAGGTGACCACCGT +
Preference number: 4 (lower is better)
Translates to: PAFHQRTTPAGPLSYSCGSRQQP*HPGDHR
Trigger: ACGGTGGTCACCTGGATGCCAAGGCTGCTGACGGGA...ACCACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CCA 90 bp AGGCCTGCTCTTCACCTCCGCGATGAGCAGCTTTGTGAGGTCGTGCGGCTCCCCAGAAGAGTTTTTGACTaGCAAGGGCGGGGGACAGTC +
Preference number: 4 (lower is better)
Translates to: RPALHLRDEQLCEVVRLPRRVFD*QGRGTV
Trigger: GACTGTCCCCCGCCCTTGCCAGTCAAAAACTCTTCT...GGGGAGCCGCACGACCTCACAAAGCTGCTCATCGCGGAGGTGAAGAGCAGGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp AGGGTCCCTGATCTGGAAGTCAGTGATGGAGGGCTCTCCTGCCCTTGTGAAGCCAGGGGCTCATCAGACTaGAGGAGGAGGCTGGACTGC +
Preference number: 4 (lower is better)
Translates to: RVPDLEVSDGGLSCPCEARGSSD*RRRLDC
Trigger: GCAGTCCAGCCTCCTCCTCCAGTCTGATGAGCCCCT...GGCTTCACAAGGGCAGGAGAGCCCTCCATCACTGACTTCCAGATCAGGGACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CCA 90 bp ACCCTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCACATGGGTGGGGCTTGGCTaGGATCCCCAGGTTCCAAGG +
Preference number: 4 (lower is better)
Translates to: TLFLWEPQTSQVSRGNSTWVGLG*DPQVPR
Trigger: CCTTGGAACCTGGGGATCCCAGCCAAGCCCCACCCA...TGTGCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CCA 90 bp CCTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCACAGCCTCTTCAGAGTTGGGTaGGGCTTGGCTGGGATCCCC +
Preference number: 4 (lower is better)
Translates to: PVPVGTTDQSGLQGKQHSLFRVG*GLAGIP
Trigger: GGGGATCCCAGCCAAGCCCCACCCAACTCTGAAGAG...GCTGTGCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp GAGGGACTGAGAGTTCTGCAGCTGAAGCCAGCTCAGGAGCACTCAGATCCAGCCCTCTTCAGAGTTGGGTaGGGCTTGGCTGGGATCCCC +
Preference number: 4 (lower is better)
Translates to: EGLRVLQLKPAQEHSDPALFRVG*GLAGIP
Trigger: GGGGATCCCAGCCAAGCCCCACCCAACTCTGAAGAG...GGCTGGATCTGAGTGCTCCTGAGCTGGCTTCAGCTGCAGAACTCTCAGTCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635461.1
ENST00000635693.1
CDS-3UTR CCA 90 bp AGGGCTCCCAGGCCCCTAGCGGGTAATGAGATAGGAAAGAACCGCCATCAGTCCGGCCCTCTTCAGAGTTaGGTGGGGCTTGGCTGGGAT +
Preference number: 4 (lower is better)
Translates to: RAPRPLAGNEIGKNRHQSGPLQS*VGLGWD
Trigger: ATCCCAGCCAAGCCCCACCCAACTCTGAAGAGGGCC...GGACTGATGGCGGTTCTTTCCTATCTCATTACCCGCTAGGGGCCTGGGAGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635461.1
ENST00000635693.1
CDS-3UTR CCA 90 bp GAGGGACTGAGAGTTCTGCAGCTGAAGCCAGCTCAGGAGCACTCAGATCCAGCCGGCCCTCTTCAGAGTTaGGTGGGGCTTGGCTGGGAT +
Preference number: 4 (lower is better)
Translates to: EGLRVLQLKPAQEHSDPAGPLQS*VGLGWD
Trigger: ATCCCAGCCAAGCCCCACCCAACTCTGAAGAGGGCC...GGCTGGATCTGAGTGCTCCTGAGCTGGCTTCAGCTGCAGAACTCTCAGTCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635461.1
ENST00000635693.1
CDS-3UTR CCA 90 bp CCTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCACAGCGGCCCTCTTCAGAGTTaGGTGGGGCTTGGCTGGGAT +
Preference number: 4 (lower is better)
Translates to: PVPVGTTDQSGLQGKQHSGPLQS*VGLGWD
Trigger: ATCCCAGCCAAGCCCCACCCAACTCTGAAGAGGGCC...GCTGTGCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp AGGTATAAACCAGCTGAGTCCAGAGCCATGCCCTGGAATCTGACCCTGCCTATTGGGTCTGGAGGTGCCTaGGGGCTCTCGGAGGCCCTC +
Preference number: 4 (lower is better)
Translates to: RYKPAESRAMPWNLTLPIGSGGA*GLSEAL
Trigger: GAGGGCCTCCGAGAGCCCCCAGGCACCTCCAGACCC...AATAGGCAGGGTCAGATTCCAGGGCATGGCTCTGGACTCAGCTGGTTTATACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp GGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGGTATCTGAAGTGCCTAACATGTCAGGCTGGGTCTaGAGGTGCCTGGGGGCTCTC +
Preference number: 4 (lower is better)
Translates to: GPPLQGPCLTRVVSEVPNMSGWV*RCLGAL
Trigger: GAGAGCCCCCAGGCACCTCCAGACCCAGCCTGACAT...GTTAGGCACTTCAGATACCACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp ACCGCCATCAGTCCTAACAGGGAAAGGCCATGTGTCCTTGGTAGAGGCATGGCCATGTCAGGCTGGGTCTaGAGGTGCCTGGGGGCTCTC +
Preference number: 4 (lower is better)
Translates to: TAISPNRERPCVLGRGMAMSGWV*RCLGAL
Trigger: GAGAGCCCCCAGGCACCTCCAGACCCAGCCTGACAT...GGCCATGCCTCTACCAAGGACACATGGCCTTTCCCTGTTAGGACTGATGGCGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000492982.6
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635461.1
ENST00000635693.1
CDS-3UTR CCA 90 bp CTGATCTGGAAGTCAGTGATGGAGGGCTCTCCTGCCCTTGTGAAGCCCCCAGACACATCTCCGAAGGGGTaGTCCCGGATGTCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: LIWKSVMEGSPALVKPPDTSPKG*SRMSGW
Trigger: CCAGCCTGACATCCGGGACCACCCCTTCGGAGATGT...GTCTGGGGGCTTCACAAGGGCAGGAGAGCCCTCCATCACTGACTTCCAGATCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp CCAGCTTTCCACCAAAGGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGGTACATCTCCGAAGGGGTaGTCCCGGATGTCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: PAFHQRTTPAGPLSYSCGTSPKG*SRMSGW
Trigger: CCAGCCTGACATCCGGGACCACCCCTTCGGAGATGT...ACCACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp AGGGCTCCCAGGCCCCTAGCGGGTAATGAGATAGGAAAGAACCGCCATCAGTCCACATCTCCGAAGGGGTaGTCCCGGATGTCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: RAPRPLAGNEIGKNRHQSTSPKG*SRMSGW
Trigger: CCAGCCTGACATCCGGGACCACCCCTTCGGAGATGT...GGACTGATGGCGGTTCTTTCCTATCTCATTACCCGCTAGGGGCCTGGGAGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635461.1
ENST00000635693.1
CDS-3UTR CCA 90 bp GAGTCTCGATCTGATGAGGGACTGAGAGTTCTGCAGCTGAAGCCAGCTCAGGAGCCGGCACGTTCCTTCTaGGCAGAGGCTGCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: ESRSDEGLRVLQLKPAQEPARSF*AEAAWL
Trigger: CAGCCAGGCAGCCTCTGCCCAGAAGGAACGTGCCGG...CTCCTGAGCTGGCTTCAGCTGCAGAACTCTCAGTCCCTCATCAGATCGAGACTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635461.1
ENST00000635693.1
CDS-3UTR CCA 90 bp TCTCGATCTGATGAGGGACTGAGAGTTCTGCAGCTGAAGCCAGCTCAGGAGCACCCGGCACGTTCCTTCTaGGCAGAGGCTGCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: SRSDEGLRVLQLKPAQEHPARSF*AEAAWL
Trigger: CAGCCAGGCAGCCTCTGCCCAGAAGGAACGTGCCGG...GTGCTCCTGAGCTGGCTTCAGCTGCAGAACTCTCAGTCCCTCATCAGATCGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635461.1
ENST00000635693.1
CDS-3UTR CCA 90 bp TCCTGCCCATTGGCAAAGGCCTCCAGTACCGACAGGAGGTCCCTGTTGCAAATGCATTGGGGCCTAGCATaGGGCATGTGGGGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: SCPLAKASSTDRRSLLQMHWGLA*GMWGPA
Trigger: TGCTGGCCCCCACATGCCCCATGCTAGGCCCCAATG...CATTTGCAACAGGGACCTCCTGTCGGTACTGGAGGCCTTTGCCAATGGGCAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR TCA 90 bp CAGTCCCTACTTGGCAGGGTCCCTGATCTGGAAGTCAGTGATGGAGGGCTCTCCCAGCAACCTCGCGGGTaGACACGGCCAAGTTTAGGA +
Preference number: 4 (lower is better)
Translates to: QSLLGRVPDLEVSDGGLSQQPRG*TRPSLG
Trigger: TCCTAAACTTGGCCGTGTTCACCCGCGAGGTTGCTG...GGAGAGCCCTCCATCACTGACTTCCAGATCAGGGACCCTGCCAAGTAGGGACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000618240.4
ENST00000634561.2
ENST00000635693.1
CDS-3UTR TCA 90 bp CCTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCACAGCCAGCAACCTCGCGGGTaGACACGGCCAAGTTTAGGA +
Preference number: 4 (lower is better)
Translates to: PVPVGTTDQSGLQGKQHSQQPRG*TRPSLG
Trigger: TCCTAAACTTGGCCGTGTTCACCCGCGAGGTTGCTG...GCTGTGCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000618240.4
ENST00000634561.2
ENST00000635693.1
CDS-3UTR TCA 90 bp CCTGCCTATTCCCAAGCCCAACCCTTAAGACCAGCTTTCCACCAAAGGACCACCCCGCCAGCTTCTCGATaGAGGGGAACAGGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: PAYSQAQPLRPAFHQRTTPPASR*RGTGSG
Trigger: CCCAGAGCCTGTTCCCCTTCATCGAGAAGCTGGCGG...GGTGGTCCTTTGGTGGAAAGCTGGTCTTAAGGGTTGGGCTTGGGAATAGGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR TCA 90 bp GTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCACCTCCGCGATGAGCAGCTTATGGAGTGCATGTACTaGGGCCGCCAGCTTCTCGAT +
Preference number: 4 (lower is better)
Translates to: VAALAIPRPALHLRDEQLMECMY*GRQLLD
Trigger: ATCGAGAAGCTGGCGGCCTCAGTACATGCACTCCAT...AAGCTGCTCATCGCGGAGGTGAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR TCA 90 bp CTTGGCAGGGTCCCTGATCTGGAAGTCAGTGATGGAGGGCTCTCCTGCCCTTGTTCGTCCTCCTGGGCCTaGTGGAGTGCATGTACTGAG +
Preference number: 4 (lower is better)
Translates to: LGRVPDLEVSDGGLSCPCSSSWA*WSACTE
Trigger: CTCAGTACATGCACTCCATCAGGCCCAGGAGGACGA...ACAAGGGCAGGAGAGCCCTCCATCACTGACTTCCAGATCAGGGACCCTGCCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR TCA 90 bp GTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCACCTCCGCGATGAGCAGCTTGCTATAGCCACATCCTaGGTTCTTCCGGCTCAGGTG +
Preference number: 4 (lower is better)
Translates to: VAALAIPRPALHLRDEQLAIATS*VLPAQV
Trigger: CACCTGAGCCGGAAGAACTCAGGATGTGGCTATAGC...AAGCTGCTCATCGCGGAGGTGAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR TCA 90 bp CTGATCTGGAAGTCAGTGATGGAGGGCTCTCCTGCCCTTGTGAAGCCCCCAGACTGCTCGTCCTCTGCCTaGAAGTGGTACGTCCGGTTG +
Preference number: 4 (lower is better)
Translates to: LIWKSVMEGSPALVKPPDCSSSA*KWYVRL
Trigger: CAACCGGACGTACCACTTTCAGGCAGAGGACGAGCA...GTCTGGGGGCTTCACAAGGGCAGGAGAGCCCTCCATCACTGACTTCCAGATCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR TCA 90 bp CCTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCACAGCCAGGTCCAAGGTGAGTaGCTGCATGCGCGAAAAGCG +
Preference number: 4 (lower is better)
Translates to: PVPVGTTDQSGLQGKQHSQVQGE*LHARKA
Trigger: CGCTTTTCGCGCATGCAGTCACTCACCTTGGACCTG...GCTGTGCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR TCA 90 bp AGCTTCAGCAAGCAGCGCTTCTCTTCCTCATCCTCCTCACTGTCAGAGCCAGGCCATGTCACTCTCAGCTaGGGGTTTAGGGCCGCCGTG +
Preference number: 4 (lower is better)
Translates to: SFSKQRFSSSSSSLSEPGHVTLS*GFRAAV
Trigger: CACGGCGGCCCTAAACCCTCAGCTGAGAGTGACATG...GCCTGGCTCTGACAGTGAGGAGGATGAGGAAGAGAAGCGCTGCTTGCTGAAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484418.1
ENST00000635167.1
CDS-3UTR TCA 90 bp CACCAGAGGCAGGGAAGCCTGGTTGGCGACTTTGACAGCCAAATGCAAGACGAGCATGTCACTCTCAGCTaGGGGTTTAGGGCCGCCGTG +
Preference number: 4 (lower is better)
Translates to: HQRQGSLVGDFDSQMQDEHVTLS*GFRAAV
Trigger: CACGGCGGCCCTAAACCCTCAGCTGAGAGTGACATG...CTCGTCTTGCATTTGGCTGTCAAAGTCGCCAACCAGGCTTCCCTGCCTCTGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
CDS-3UTR TCA 90 bp CAGCTGTGTTGGCCATTGGTGCTCTCTAGTCTCCCCTGCTTGGCTTGGCCCATTCATGTCACTCTCAGCTaGGGGTTTAGGGCCGCCGTG +
Preference number: 4 (lower is better)
Translates to: QLCWPLVLSSLPCLAWPIHVTLS*GFRAAV
Trigger: CACGGCGGCCCTAAACCCTCAGCTGAGAGTGACATG...AATGGGCCAAGCCAAGCAGGGGAGACTAGAGAGCACCAATGGCCAACACAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR TCA 90 bp CAGCTGTGTTGGCCATTGGTGCTCTCTAGTCTCCCCTGCTTGGCTTGGCCCATTCCTTCAGCAGCAGCTTaGGGCAGTCGGGCTGGTTGT +
Preference number: 4 (lower is better)
Translates to: QLCWPLVLSSLPCLAWPIPSAAA*GSRAGC
Trigger: ACAACCAGCCCGACTGCCTCAAGCTGCTGCTGAAGG...AATGGGCCAAGCCAAGCAGGGGAGACTAGAGAGCACCAATGGCCAACACAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR TCA 90 bp GGCCCTTGTCTTACTCGTGTGGTATCTGAAGTGCCTAACACAGGTCCAGACATACTCCCACTGGCCCAGTaGGCCTGGGCCGGGAGCTTC +
Preference number: 4 (lower is better)
Translates to: GPCLTRVVSEVPNTGPDILPLAQ*AWAGSF
Trigger: GAAGCTCCCGGCCCAGGCTCACTGGGCCAGTGGGAG...TATGTCTGGACCTGTGTTAGGCACTTCAGATACCACACGAGTAAGACAAGGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR TCA 90 bp CAAGCCCAACCCTTAAGACCAGCTTTCCACCAAAGGACCACCCCTGCAGGGCCCCATAGGTCTTGTTGCTaGTGTCCAGCCTCCCACTGG +
Preference number: 4 (lower is better)
Translates to: QAQPLRPAFHQRTTPAGPHRSCC*CPASHW
Trigger: CCAGTGGGAGGCTGGACATCAGCAACAAGACCTATG...GGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGCTGGTCTTAAGGGTTGGGCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR TCA 90 bp CTCGTGCTCGTCCTCTGCCTGAAAGTGGTACGTCCGGTTGTGGGTCACCAGGTCCATAGGTCTTGTTGCTaGTGTCCAGCCTCCCACTGG +
Preference number: 4 (lower is better)
Translates to: LVLVLCLKVVRPVVGHQVHRSCC*CPASHW
Trigger: CCAGTGGGAGGCTGGACATCAGCAACAAGACCTATG...GACCTGGTGACCCACAACCGGACGTACCACTTTCAGGCAGAGGACGAGCACGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR TCA 90 bp TGTCAGAGCCAGGCTCTGTGGAAATTACCCAGGAGTAGTCCACATGTAGAGGGATCCTCACTCTCGCCCTaGGGGGTGGCTGCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: CQSQALWKLPRSSPHVEGSSLSP*GVAAPR
Trigger: CCTGGGAGCAGCCACCCCTCAGGGCGAGAGTGAGGA...TCCCTCTACATGTGGACTACTCCTGGGTAATTTCCACAGAGCCTGGCTCTGACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR TCA 90 bp GACCAGCTTTCCACCAAAGGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGTCCGAGAAGAGTTTTTaGCTGGCAAGGGCGGGGGAC +
Preference number: 4 (lower is better)
Translates to: DQLSTKGPPLQGPCLTRVSEKSF*LARAGD
Trigger: GTCCCCCGCCCTTGCCAGTCAAAAACTCTTCTCGGA...CACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGCTGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR TCA 90 bp AAATTACCCAGGAGTAGTCCACATGTAGAGGGAAGGCAAAGGTCCCCGCCTGGGCAGAGGCTGCCTGGCTaGGGGACCATCTTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: KLPRSSPHVEGRQRSPPGQRLPG*GTIFRA
Trigger: AGCCCTGAAGATGGTCCCTCAGCCAGGCAGCCTCTG...CCCAGGCGGGGACCTTTGCCTTCCCTCTACATGTGGACTACTCCTGGGTAATTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR TCA 90 bp AGGGCTCCCAGGCCCCTAGCGGGTAATGAGATAGGAAAGAACCGCCATCAGTCCAGCCATCTCCTTCAGTaGTGCCAACCGGCACGTTCC +
Preference number: 4 (lower is better)
Translates to: RAPRPLAGNEIGKNRHQSSHLLQ*CQPARS
Trigger: GGAACGTGCCGGTTGGCATCACTGAAGGAGATGGCT...GGACTGATGGCGGTTCTTTCCTATCTCATTACCCGCTAGGGGCCTGGGAGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635461.1
ENST00000635693.1
CDS-3UTR TCA 90 bp GACCAGCTTTCCACCAAAGGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGAGCCATCTCCTTCAGTaGTGCCAACCGGCACGTTCC +
Preference number: 4 (lower is better)
Translates to: DQLSTKGPPLQGPCLTRVSHLLQ*CQPARS
Trigger: GGAACGTGCCGGTTGGCATCACTGAAGGAGATGGCT...CACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGCTGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR TCA 90 bp TCTTTCCTTCTGCCATCCAGAGGCCTGAGGGACAGGGCTGGGACCCACCTTCTCCTCAAGTCCCAGCTCTaGACATTGGGGCCTAGCATG +
Preference number: 4 (lower is better)
Translates to: SFLLPSRGLRDRAGTHLLLKSQL*TLGPSM
Trigger: CATGCTAGGCCCCAATGTTCAGAGCTGGGACTTGAG...GAGAAGGTGGGTCCCAGCCCTGTCCCTCAGGCCTCTGGATGGCAGAAGGAAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR GCA 90 bp CCTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCACAGCGGGACAGGTGGCTGTTaGCTAAGGATTCCACGGCCT +
Preference number: 4 (lower is better)
Translates to: PVPVGTTDQSGLQGKQHSGTGGC*LRIPRP
Trigger: AGGCCGTGGAATCCTTAGGCAACAGCCACCTGTCCC...GCTGTGCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000618240.4
ENST00000634561.2
ENST00000635693.1
CDS-3UTR GCA 90 bp AGGGCTCCCAGGCCCCTAGCGGGTAATGAGATAGGAAAGAACCGCCATCAGTCCGGGACAGGTGGCTGTTaGCTAAGGATTCCACGGCCT +
Preference number: 4 (lower is better)
Translates to: RAPRPLAGNEIGKNRHQSGTGGC*LRIPRP
Trigger: AGGCCGTGGAATCCTTAGGCAACAGCCACCTGTCCC...GGACTGATGGCGGTTCTTTCCTATCTCATTACCCGCTAGGGGCCTGGGAGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000618240.4
ENST00000634561.2
ENST00000635693.1
CDS-3UTR GCA 90 bp CCAGCGCTGGGCTCCCCGAGGAAGGCGCTGCTCAGGGCTTCGTCCTTGCTGTTCTCTTGGAAAAAGTTGTaGTGGGCGTGGAAGAACTTG +
Preference number: 4 (lower is better)
Translates to: PALGSPRKALLRASSLLFSWKKL*WAWKNL
Trigger: CAAGTTCTTCCACGCCCAGCACAACTTTTTCCAAGA...GAACAGCAAGGACGAAGCCCTGAGCAGCGCCTTCCTCGGGGAGCCCAGCGCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR GCA 90 bp GCACTGGCTATTCCCAGGCCTGCTCTTCACCTCCGCGATGAGCAGCTTTGTGAGTCTCTGCTCTCAAGCTaGAGTGTCCCTCGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: ALAIPRPALHLRDEQLCESLLSS*SVPRRE
Trigger: CTCCCTCCGAGGGACACTGCAGCTTGAGAGCAGAGA...CTCACAAAGCTGCTCATCGCGGAGGTGAAGAGCAGGCCTGGGAATAGCCAGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR GCA 90 bp CAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCACCTCCGCGATGAGCAGCTCAGGTGTTCCTCTCTaGTCTCAAGCTGCAGTGTCC +
Preference number: 4 (lower is better)
Translates to: QSQHWLFPGLLFTSAMSSSGVPL*SQAAVS
Trigger: GGACACTGCAGCTTGAGAGCAGAGAGGAACACCTGA...GCTGCTCATCGCGGAGGTGAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR GCA 90 bp CATGTAGAGGGAAGGCAAAGGTCCCCGCCTGGGCCTGCTCCAGCAGCTCCTCACCTTGGTGCTGGTGGATaGTATAGCCACATCCTGAGT +
Preference number: 4 (lower is better)
Translates to: HVEGRQRSPPGPAPAAPHLGAGG*YSHILS
Trigger: ACTCAGGATGTGGCTATAGCATCCACCAGCACCAAG...GTGAGGAGCTGCTGGAGCAGGCCCAGGCGGGGACCTTTGCCTTCCCTCTACATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR GCA 90 bp CCTCATCCTCCTCACTGTCAGAGCCAGGCTCTGTGGAAATTACCCAGGAGTAGTCCCCGAGGAAGGCGCTaGTCAGGGCTTCGTCCTTGC +
Preference number: 4 (lower is better)
Translates to: PHPPHCQSQALWKLPRSSPRGRR*SGLRPC
Trigger: GCAAGGACGAAGCCCTGAGCAGCGCCTTCCTCGGGG...ACTACTCCTGGGTAATTTCCACAGAGCCTGGCTCTGACAGTGAGGAGGATGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR GCA 90 bp CACCAGAGGCAGGGAAGCCTGGTTGGCGACTTTGACAGCCAAATGCAAGACGAGAGCTTTGTGAGGTCGTaGGGCTCCCCATCATGGCCG +
Preference number: 4 (lower is better)
Translates to: HQRQGSLVGDFDSQMQDESFVRS*GSPSWP
Trigger: CGGCCATGATGGGGAGCCGCACGACCTCACAAAGCT...CTCGTCTTGCATTTGGCTGTCAAAGTCGCCAACCAGGCTTCCCTGCCTCTGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR GCA 90 bp GCCAACCAAAGCTCTCCCCTTCAGCAGCAGCTTGAGGCAGTCGGGCTGGTTGTATGTAGTCCCTGCGGGTaGCCATGTCACTCTCAGCTG +
Preference number: 4 (lower is better)
Translates to: ANQSSPLQQQLEAVGLVVCSPCG*PCHSQL
Trigger: CAGCTGAGAGTGACATGGGCACCCGCAGGGACTACA...TACAACCAGCCCGACTGCCTCAAGCTGCTGCTGAAGGGGAGAGCTTTGGTTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
CDS-3UTR GCA 90 bp CTGATCTGGAAGTCAGTGATGGAGGGCTCTCCTGCCCTTGTGAAGCCCCCAGACTGTAGTCCCTGCGGGTaGCCATGTCACTCTCAGCTG +
Preference number: 4 (lower is better)
Translates to: LIWKSVMEGSPALVKPPDCSPCG*PCHSQL
Trigger: CAGCTGAGAGTGACATGGGCACCCGCAGGGACTACA...GTCTGGGGGCTTCACAAGGGCAGGAGAGCCCTCCATCACTGACTTCCAGATCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR GCA 90 bp AGCAGGTCCAAGGTGAGTGACTGCATGCGCGAAAAGCGCACGCCCAGTTCGCGGAGGTGTGCACCGGCGTaGAAACCTATGCTCCACATA +
Preference number: 4 (lower is better)
Translates to: SRSKVSDCMREKRTPSSRRCAPA*KPMLHI
Trigger: TATGTGGAGCATAGGTTTGCACGCCGGTGCACACCT...CCGCGAACTGGGCGTGCGCTTTTCGCGCATGCAGTCACTCACCTTGGACCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR GCA 90 bp CCAGCTTTCCACCAAAGGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGGTGGCTGTCCAAAGTCCTaGCCATTGGCAAAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: PAFHQRTTPAGPLSYSCGGCPKS*PLAKAS
Trigger: GGAGGCCTTTGCCAATGGGCAGGACTTTGGACAGCC...ACCACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR GCA 90 bp AGGGCTCCCAGGCCCCTAGCGGGTAATGAGATAGGAAAGAACCGCCATCAGTCCGACGAGTTCTTCAGGTaGCTGTGCATCAGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: RAPRPLAGNEIGKNRHQSDEFFR*LCIRPW
Trigger: CCAGGGCCTGATGCACAGGCACCTGAAGAACTCGTC...GGACTGATGGCGGTTCTTTCCTATCTCATTACCCGCTAGGGGCCTGGGAGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR GCA 90 bp AGGGTCCCTGATCTGGAAGTCAGTGATGGAGGGCTCTCCTGCCCTTGTGAAGCCGGGCTGGTTGTAGAGTaGTGCGTAGTGCAGAGCCGT +
Preference number: 4 (lower is better)
Translates to: RVPDLEVSDGGLSCPCEAGLVVE*CVVQSR
Trigger: ACGGCTCTGCACTACGCAGCACTCTACAACCAGCCC...GGCTTCACAAGGGCAGGAGAGCCCTCCATCACTGACTTCCAGATCAGGGACCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR GCA 90 bp AGGTATAAACCAGCTGAGTCCAGAGCCATGCCCTGGAATCTGACCCTGCCTATTGTCCCCGCCTGGGCCTaGTCCAGCAGCTCCTCACAC +
Preference number: 4 (lower is better)
Translates to: RYKPAESRAMPWNLTLPIVPAWA*SSSSSH
Trigger: GTGTGAGGAGCTGCTGGAGCAGGCCCAGGCGGGGAC...AATAGGCAGGGTCAGATTCCAGGGCATGGCTCTGGACTCAGCTGGTTTATACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR GCA 90 bp CTCCCAGTCCTTGAGCCATCTCCTTCAGTGATGCCAACCGGCACGTTCCTTCTGCTTCTGGGCAGAGGCTaGCTGGCTGAGGGACCATCT +
Preference number: 4 (lower is better)
Translates to: LPVLEPSPSVMPTGTFLLLLGRG*LAEGPS
Trigger: AGATGGTCCCTCAGCCAGGCAGCCTCTGCCCAGAAG...CAGAAGGAACGTGCCGGTTGGCATCACTGAAGGAGATGGCTCAAGGACTGGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000492982.6
ENST00000618240.4
ENST00000634705.1
ENST00000635693.1
CDS-3UTR GCA 90 bp GGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGGTATCTGAAGTGCCTAACCTTCTGGGCAGAGGCTaGCTGGCTGAGGGACCATCT +
Preference number: 4 (lower is better)
Translates to: GPPLQGPCLTRVVSEVPNLLGRG*LAEGPS
Trigger: AGATGGTCCCTCAGCCAGGCAGCCTCTGCCCAGAAG...GTTAGGCACTTCAGATACCACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR GCA 90 bp ACCCTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCACAGATGGAGGGCTCTCCTaGCCTTGTGAAGCCCCCAGA +
Preference number: 4 (lower is better)
Translates to: TLFLWEPQTSQVSRGNSTDGGLS*PCEAPR
Trigger: TCTGGGGGCTTCACAAGGGCAGGAGAGCCCTCCATC...TGTGCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR GCA 90 bp ACCGCCATCAGTCCTAACAGGGAAAGGCCATGTGTCCTTGGTAGAGGCATGGCCGATGGAGGGCTCTCCTaGCCTTGTGAAGCCCCCAGA +
Preference number: 4 (lower is better)
Translates to: TAISPNRERPCVLGRGMADGGLS*PCEAPR
Trigger: TCTGGGGGCTTCACAAGGGCAGGAGAGCCCTCCATC...GGCCATGCCTCTACCAAGGACACATGGCCTTTCCCTGTTAGGACTGATGGCGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR GCA 90 bp AGGGTCCCTGATCTGGAAGTCAGTGATGGAGGGCTCTCCTGCCCTTGTGAAGCCCCAAAGGACCACCCCTaGAGGGCCCTTGTCTTACTC +
Preference number: 4 (lower is better)
Translates to: RVPDLEVSDGGLSCPCEAPKDHP*RALVLL
Trigger: GAGTAAGACAAGGGCCCTGCAGGGGTGGTCCTTTGG...GGCTTCACAAGGGCAGGAGAGCCCTCCATCACTGACTTCCAGATCAGGGACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp ACAACCCTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCCCAAGGCCGGAGCTATaGATTGCCCGCACAGCCTTC +
Preference number: 4 (lower is better)
Translates to: TTLFLWEPQTSQVSRGNSPRPEL*IARTAF
Trigger: GAAGGCTGTGCGGGCAATCCATAGCTCCGGCCTTGG...GCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAGGGTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000618240.4
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp CACCTCCGCGATGAGCAGCTTTGTGAGGTCGTGCGGCTCCCCATCATGGCCGGCCCAGCTTGGCCATTTTaGCTTCATAGTCCTTCCATG +
Preference number: 4 (lower is better)
Translates to: HLRDEQLCEVVRLPIMAGPAWPF*LHSPSM
Trigger: CATGGAAGGACTATGAAGCCAAAATGGCCAAGCTGG...GCCGGCCATGATGGGGAGCCGCACGACCTCACAAAGCTGCTCATCGCGGAGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp TCTCGATCTGATGAGGGACTGAGAGTTCTGCAGCTGAAGCCAGCTCAGGAGCACTCCCTCCTGTCACCCTaGCCCGATCGCGCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: SRSDEGLRVLQLKPAQEHSLLSP*PDRAPS
Trigger: AGAAGGAGCGCGATCGGGCCAGGGTGACAGGAGGGA...GTGCTCCTGAGCTGGCTTCAGCTGCAGAACTCTCAGTCCCTCATCAGATCGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000618240.4
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp CTGATCTGGAAGTCAGTGATGGAGGGCTCTCCTGCCCTTGTGAAGCCCCCAGACAAGGGGAACAGGCTCTaGGCAGCCTTCCAGCCATCT +
Preference number: 4 (lower is better)
Translates to: LIWKSVMEGSPALVKPPDKGNRL*AAFQPS
Trigger: AGATGGCTGGAAGGCTGCCCAGAGCCTGTTCCCCTT...GTCTGGGGGCTTCACAAGGGCAGGAGAGCCCTCCATCACTGACTTCCAGATCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR CCA 90 bp GAGGGACTGAGAGTTCTGCAGCTGAAGCCAGCTCAGGAGCACTCAGATCCAGCCAAGGGGAACAGGCTCTaGGCAGCCTTCCAGCCATCT +
Preference number: 4 (lower is better)
Translates to: EGLRVLQLKPAQEHSDPAKGNRL*AAFQPS
Trigger: AGATGGCTGGAAGGCTGCCCAGAGCCTGTTCCCCTT...GGCTGGATCTGAGTGCTCCTGAGCTGGCTTCAGCTGCAGAACTCTCAGTCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR CCA 90 bp ACCCTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCACAAGGGAGTCCCGGAGCTaGGTCAGCTTCTGTAGCTCG +
Preference number: 4 (lower is better)
Translates to: TLFLWEPQTSQVSRGNSTRESRS*VSFCSS
Trigger: CGAGCTACAGAAGCTGACCCAGCTCCGGGACTCCCT...TGTGCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR CCA 90 bp TGTTCTGCAACACTGACACCCACGCCTCACACTCGTGCTCGTCCTCTGCCTGAAAGGGAGTCCCGGAGCTaGGTCAGCTTCTGTAGCTCG +
Preference number: 4 (lower is better)
Translates to: CSATLTPTPHTRARPLPERESRS*VSFCSS
Trigger: CGAGCTACAGAAGCTGACCCAGCTCCGGGACTCCCT...TTCAGGCAGAGGACGAGCACGAGTGTGAGGCGTGGGTGTCAGTGTTGCAGAACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR CCA 90 bp CTGATCTGGAAGTCAGTGATGGAGGGCTCTCCTGCCCTTGTGAAGCCCCCAGACTGGTACGTCCGGTTGTaGGTCACCAGGTCGAAGCAC +
Preference number: 4 (lower is better)
Translates to: LIWKSVMEGSPALVKPPDWYVRL*VTRSKH
Trigger: GTGCTTCGACCTGGTGACCCACAACCGGACGTACCA...GTCTGGGGGCTTCACAAGGGCAGGAGAGCCCTCCATCACTGACTTCCAGATCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR CCA 90 bp AAAGTGGTACGTCCGGTTGTGGGTCACCAGGTCGAAGCACTTTTTCTCCTCAGGACGCCCAGTTCGCGGTaGACGCCCGAGCACTGGATG +
Preference number: 4 (lower is better)
Translates to: KVVRPVVGHQVEALFLLRTPSSR*TPEHWM
Trigger: CATCCAGTGCTCGGGCGTCCACCGCGAACTGGGCGT...CCTGAGGAGAAAAAGTGCTTCGACCTGGTGACCCACAACCGGACGTACCACTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR CCA 90 bp CTCATCCTCCTCACTGTCAGAGCCAGGCTCTGTGGAAATTACCCAGGAGTAGTCACGCCCAGTTCGCGGTaGACGCCCGAGCACTGGATG +
Preference number: 4 (lower is better)
Translates to: LILLTVRARLCGNYPGVVTPSSR*TPEHWM
Trigger: CATCCAGTGCTCGGGCGTCCACCGCGAACTGGGCGT...GACTACTCCTGGGTAATTTCCACAGAGCCTGGCTCTGACAGTGAGGAGGATGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp CTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCACAGCCCCGTGTGAGGGTAGCTaGGCCTCCATGACCTCATTG +
Preference number: 4 (lower is better)
Translates to: LFLWEPQTSQVSRGNSTAPCEGS*ASMTSL
Trigger: CAATGAGGTCATGGAGGCCCAGCTACCCTCACACGG...GGCTGTGCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CCA 90 bp CCACGGCCTCTCGGTACTGCTCTTCATTCTCCACATGGCCAAGGCCGGAGCTATCCGTGTGAGGGTAGCTaGGCCTCCATGACCTCATTG +
Preference number: 4 (lower is better)
Translates to: PRPLGTALHSPHGQGRSYPCEGS*ASMTSL
Trigger: CAATGAGGTCATGGAGGCCCAGCTACCCTCACACGG...ATAGCTCCGGCCTTGGCCATGTGGAGAATGAAGAGCAGTACCGAGAGGCCGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp ACCCTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCACACTGTGCATCAGGCCCTaGCAGCGGCTGTCCAAAGTC +
Preference number: 4 (lower is better)
Translates to: TLFLWEPQTSQVSRGNSTLCIRP*QRLSKV
Trigger: GACTTTGGACAGCCGCTGCCAGGGCCTGATGCACAG...TGTGCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CCA 90 bp TCTGCAACACTGACACCCACGCCTCACACTCGTGCTCGTCCTCTGCCTGAAAGTCTGTGCATCAGGCCCTaGCAGCGGCTGTCCAAAGTC +
Preference number: 4 (lower is better)
Translates to: SATLTPTPHTRARPLPESLCIRP*QRLSKV
Trigger: GACTTTGGACAGCCGCTGCCAGGGCCTGATGCACAG...ACTTTCAGGCAGAGGACGAGCACGAGTGTGAGGCGTGGGTGTCAGTGTTGCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp AGGGCTCCCAGGCCCCTAGCGGGTAATGAGATAGGAAAGAACCGCCATCAGTCCAGAGGCAGGGAAGCCTaGTTGGCGACTTTGACAGCC +
Preference number: 4 (lower is better)
Translates to: RAPRPLAGNEIGKNRHQSRGREA*LATLTA
Trigger: GGCTGTCAAAGTCGCCAACCAGGCTTCCCTGCCTCT...GGACTGATGGCGGTTCTTTCCTATCTCATTACCCGCTAGGGGCCTGGGAGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CCA 90 bp GGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGGTATCTGAAGTGCCTAACTCCCGTCAGCAGCCTTaGCATCCAGGTGACCACCGT +
Preference number: 4 (lower is better)
Translates to: GPPLQGPCLTRVVSEVPNSRQQP*HPGDHR
Trigger: ACGGTGGTCACCTGGATGCCAAGGCTGCTGACGGGA...GTTAGGCACTTCAGATACCACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CCA 90 bp CATGTAGAGGGAAGGCAAAGGTCCCCGCCTGGGCCTGCTCCAGCAGCTCCTCACTGTGGTGCTTCTTCCTaGCTATGTCCAGAGCTGTCT +
Preference number: 4 (lower is better)
Translates to: HVEGRQRSPPGPAPAAPHCGASS*LCPELS
Trigger: AGACAGCTCTGGACATAGCCAGGAAGAAGCACCACA...GTGAGGAGCTGCTGGAGCAGGCCCAGGCGGGGACCTTTGCCTTCCCTCTACATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
CDS-3UTR CCA 90 bp CCCGCAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCACCTCCGCGATGAGTGTGGTGCTTCTTCCTaGCTATGTCCAGAGCTGTCT +
Preference number: 4 (lower is better)
Translates to: PAVAALAIPRPALHLRDECGASS*LCPELS
Trigger: AGACAGCTCTGGACATAGCCAGGAAGAAGCACCACA...CTCATCGCGGAGGTGAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp AGGTATAAACCAGCTGAGTCCAGAGCCATGCCCTGGAATCTGACCCTGCCTATTTGTCCAGCCTCCCACTaGCCCAGTGAGCCTGGGCCG +
Preference number: 4 (lower is better)
Translates to: RYKPAESRAMPWNLTLPICPASH*PSEPGP
Trigger: CGGCCCAGGCTCACTGGGCCAGTGGGAGGCTGGACA...AATAGGCAGGGTCAGATTCCAGGGCATGGCTCTGGACTCAGCTGGTTTATACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CCA 90 bp TGGCTATGTCCAGAGCTGTCTCGCCTGCTTCATTTACTGTGCCAACCAAAGCTCTGTCCAGCCTCCCACTaGCCCAGTGAGCCTGGGCCG +
Preference number: 4 (lower is better)
Translates to: WLCPELSRLLHLLCQPKLCPASH*PSEPGP
Trigger: CGGCCCAGGCTCACTGGGCCAGTGGGAGGCTGGACA...GAGCTTTGGTTGGCACAGTAAATGAAGCAGGCGAGACAGCTCTGGACATAGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
CDS-3UTR CCA 90 bp AAAGAACCGCCATCAGTCCTAACAGGGAAAGGCCATGTGTCCTTGGTAGAGGCATGTCCAGCCTCCCACTaGCCCAGTGAGCCTGGGCCG +
Preference number: 4 (lower is better)
Translates to: KEPPSVLTGKGHVSLVEACPASH*PSEPGP
Trigger: CGGCCCAGGCTCACTGGGCCAGTGGGAGGCTGGACA...TGCCTCTACCAAGGACACATGGCCTTTCCCTGTTAGGACTGATGGCGGTTCTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000492982.6
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635461.1
CDS-3UTR CCA 90 bp AGGGTCCCTGATCTGGAAGTCAGTGATGGAGGGCTCTCCTGCCCTTGTGAAGCCTGGCTGCTCCCAGGCTaGCGACAGTCTCATAGGTCT +
Preference number: 4 (lower is better)
Translates to: RVPDLEVSDGGLSCPCEAWLLPG*RQSHRS
Trigger: AGACCTATGAGACTGTCGCCAGCCTGGGAGCAGCCA...GGCTTCACAAGGGCAGGAGAGCCCTCCATCACTGACTTCCAGATCAGGGACCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CCA 90 bp GAGGGACTGAGAGTTCTGCAGCTGAAGCCAGCTCAGGAGCACTCAGATCCAGCCTGGCTGCTCCCAGGCTaGCGACAGTCTCATAGGTCT +
Preference number: 4 (lower is better)
Translates to: EGLRVLQLKPAQEHSDPAWLLPG*RQSHRS
Trigger: AGACCTATGAGACTGTCGCCAGCCTGGGAGCAGCCA...GGCTGGATCTGAGTGCTCCTGAGCTGGCTTCAGCTGCAGAACTCTCAGTCCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
ENST00000635461.1
CDS-3UTR CCA 90 bp AGGGCTCCCAGGCCCCTAGCGGGTAATGAGATAGGAAAGAACCGCCATCAGTCCTGGCTGCTCCCAGGCTaGCGACAGTCTCATAGGTCT +
Preference number: 4 (lower is better)
Translates to: RAPRPLAGNEIGKNRHQSWLLPG*RQSHRS
Trigger: AGACCTATGAGACTGTCGCCAGCCTGGGAGCAGCCA...GGACTGATGGCGGTTCTTTCCTATCTCATTACCCGCTAGGGGCCTGGGAGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
ENST00000635461.1
CDS-3UTR CCA 90 bp GGCCTGCTCTTCACCTCCGCGATGAGCAGCTTTGTGAGGTCGTGCGGCTCCCCACCTCTGAACTCAGGCTaGAGACTTCAGAACGATCTC +
Preference number: 4 (lower is better)
Translates to: GLLFTSAMSSFVRSCGSPPLNSG*RLQNDL
Trigger: GAGATCGTTCTGAAGTCTCCAGCCTGAGTTCAGAGG...TGGGGAGCCGCACGACCTCACAAAGCTGCTCATCGCGGAGGTGAAGAGCAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp CCACCGTTCTGGATGATGAAATCCACCAGAGGCAGGGAAGCCTGGTTGGCGACTAGGGGCTCATCAGACTaGAGGAGGAGGCTGGACTGC +
Preference number: 4 (lower is better)
Translates to: PPFWMMKSTRGREAWLATRGSSD*RRRLDC
Trigger: GCAGTCCAGCCTCCTCCTCCAGTCTGATGAGCCCCT...AGTCGCCAACCAGGCTTCCCTGCCTCTGGTGGATTTCATCATCCAGAACGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp ACCGCCATCAGTCCTAACAGGGAAAGGCCATGTGTCCTTGGTAGAGGCATGGCCAGGGGCTCATCAGACTaGAGGAGGAGGCTGGACTGC +
Preference number: 4 (lower is better)
Translates to: TAISPNRERPCVLGRGMARGSSD*RRRLDC
Trigger: GCAGTCCAGCCTCCTCCTCCAGTCTGATGAGCCCCT...GGCCATGCCTCTACCAAGGACACATGGCCTTTCCCTGTTAGGACTGATGGCGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000492982.6
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635461.1
CDS-3UTR CCA 90 bp ACCCTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCACACTCTTCAGAGTTGGGTaGGGCTTGGCTGGGATCCCC +
Preference number: 4 (lower is better)
Translates to: TLFLWEPQTSQVSRGNSTLFRVG*GLAGIP
Trigger: GGGGATCCCAGCCAAGCCCCACCCAACTCTGAAGAG...TGTGCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp GCTTTCCACCAAAGGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGGTATCGGCCCTCTTCAGAGTTaGGTGGGGCTTGGCTGGGAT +
Preference number: 4 (lower is better)
Translates to: AFHQRTTPAGPLSYSCGIGPLQS*VGLGWD
Trigger: ATCCCAGCCAAGCCCCACCCAACTCTGAAGAGGGCC...GATACCACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp GAGTCTCGATCTGATGAGGGACTGAGAGTTCTGCAGCTGAAGCCAGCTCAGGAGATGTCAGGCTGGGTCTaGAGGTGCCTGGGGGCTCTC +
Preference number: 4 (lower is better)
Translates to: ESRSDEGLRVLQLKPAQEMSGWV*RCLGAL
Trigger: GAGAGCCCCCAGGCACCTCCAGACCCAGCCTGACAT...CTCCTGAGCTGGCTTCAGCTGCAGAACTCTCAGTCCCTCATCAGATCGAGACTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635461.1
ENST00000635693.1
CDS-3UTR CCA 90 bp CTCCCAGTCCTTGAGCCATCTCCTTCAGTGATGCCAACCGGCACGTTCCTTCTGACATCTCCGAAGGGGTaGTCCCGGATGTCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: LPVLEPSPSVMPTGTFLLTSPKG*SRMSGW
Trigger: CCAGCCTGACATCCGGGACCACCCCTTCGGAGATGT...CAGAAGGAACGTGCCGGTTGGCATCACTGAAGGAGATGGCTCAAGGACTGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000492982.6
ENST00000618240.4
ENST00000634705.1
ENST00000635693.1
CDS-3UTR CCA 90 bp GGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGGTATCTGAAGTGCCTAACACATCTCCGAAGGGGTaGTCCCGGATGTCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: GPPLQGPCLTRVVSEVPNTSPKG*SRMSGW
Trigger: CCAGCCTGACATCCGGGACCACCCCTTCGGAGATGT...GTTAGGCACTTCAGATACCACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp ACAACCCTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCTGGGCAGAGGCTGCCTaGCTGAGGGACCATCTTCAG +
Preference number: 4 (lower is better)
Translates to: TTLFLWEPQTSQVSRGNSWAEAA*LRDHLQ
Trigger: CTGAAGATGGTCCCTCAGCCAGGCAGCCTCTGCCCA...GCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAGGGTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp TCTGCAACACTGACACCCACGCCTCACACTCGTGCTCGTCCTCTGCCTGAAAGTTGGGCAGAGGCTGCCTaGCTGAGGGACCATCTTCAG +
Preference number: 4 (lower is better)
Translates to: SATLTPTPHTRARPLPESWAEAA*LRDHLQ
Trigger: CTGAAGATGGTCCCTCAGCCAGGCAGCCTCTGCCCA...ACTTTCAGGCAGAGGACGAGCACGAGTGTGAGGCGTGGGTGTCAGTGTTGCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp CTCCCAGTCCTTGAGCCATCTCCTTCAGTGATGCCAACCGGCACGTTCCTTCTGTGGGCAGAGGCTGCCTaGCTGAGGGACCATCTTCAG +
Preference number: 4 (lower is better)
Translates to: LPVLEPSPSVMPTGTFLLWAEAA*LRDHLQ
Trigger: CTGAAGATGGTCCCTCAGCCAGGCAGCCTCTGCCCA...CAGAAGGAACGTGCCGGTTGGCATCACTGAAGGAGATGGCTCAAGGACTGGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000492982.6
ENST00000618240.4
ENST00000634705.1
ENST00000635693.1
CDS-3UTR CCA 90 bp CCTTGTGAAGCCCCCAGACTGACGGGGGAAATAGAGTCTCGATCTGATGAGGGACATTGGGGCCTAGCATaGGGCATGTGGGGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: PCEAPRLTGEIESRSDEGHWGLA*GMWGPA
Trigger: TGCTGGCCCCCACATGCCCCATGCTAGGCCCCAATG...TCCCTCATCAGATCGAGACTCTATTTCCCCCGTCAGTCTGGGGGCTTCACAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp TGCCCTTGTGAAGCCCCCAGACTGACGGGGGAAATAGAGTCTCGATCTGATGAGCATTGGGGCCTAGCATaGGGCATGTGGGGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: CPCEAPRLTGEIESRSDEHWGLA*GMWGPA
Trigger: TGCTGGCCCCCACATGCCCCATGCTAGGCCCCAATG...CTCATCAGATCGAGACTCTATTTCCCCCGTCAGTCTGGGGGCTTCACAAGGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp GAGTCTCGATCTGATGAGGGACTGAGAGTTCTGCAGCTGAAGCCAGCTCAGGAGCATTGGGGCCTAGCATaGGGCATGTGGGGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: ESRSDEGLRVLQLKPAQEHWGLA*GMWGPA
Trigger: TGCTGGCCCCCACATGCCCCATGCTAGGCCCCAATG...CTCCTGAGCTGGCTTCAGCTGCAGAACTCTCAGTCCCTCATCAGATCGAGACTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635461.1
ENST00000635693.1
CDS-3UTR CCA 90 bp AGGGCTCCCAGGCCCCTAGCGGGTAATGAGATAGGAAAGAACCGCCATCAGTCCCCCAGCTCTGAACATTaGGGCCTAGCATGGGGCATG +
Preference number: 4 (lower is better)
Translates to: RAPRPLAGNEIGKNRHQSPSSEH*GLAWGM
Trigger: CATGCCCCATGCTAGGCCCCAATGTTCAGAGCTGGG...GGACTGATGGCGGTTCTTTCCTATCTCATTACCCGCTAGGGGCCTGGGAGCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635461.1
ENST00000635693.1
CDS-3UTR CCA 90 bp CAGTCCCTACTTGGCAGGGTCCCTGATCTGGAAGTCAGTGATGGAGGGCTCTCCGCAGGGTCCCTGATCTaGAAGTCAGTGATGGAGGGC +
Preference number: 4 (lower is better)
Translates to: QSLLGRVPDLEVSDGGLSAGSLI*KSVMEG
Trigger: GCCCTCCATCACTGACTTCCAGATCAGGGACCCTGC...GGAGAGCCCTCCATCACTGACTTCCAGATCAGGGACCCTGCCAAGTAGGGACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp CTTGGCAGGGTCCCTGATCTGGAAGTCAGTGATGGAGGGCTCTCCTGCCCTTGTGCAGGGTCCCTGATCTaGAAGTCAGTGATGGAGGGC +
Preference number: 4 (lower is better)
Translates to: LGRVPDLEVSDGGLSCPCAGSLI*KSVMEG
Trigger: GCCCTCCATCACTGACTTCCAGATCAGGGACCCTGC...ACAAGGGCAGGAGAGCCCTCCATCACTGACTTCCAGATCAGGGACCCTGCCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp AGGGTCCCTGATCTGGAAGTCAGTGATGGAGGGCTCTCCTGCCCTTGTGAAGCCCTAGTCTCCCCTGCTTaGCTTGGCCCATTCCTGCCA +
Preference number: 4 (lower is better)
Translates to: RVPDLEVSDGGLSCPCEALVSPA*LGPFLP
Trigger: TGGCAGGAATGGGCCAAGCCAAGCAGGGGAGACTAG...GGCTTCACAAGGGCAGGAGAGCCCTCCATCACTGACTTCCAGATCAGGGACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp GCTAGTCTTGCAAAAGTTGCACAGAACTTGCTGGGAGACTCCCAGTCCTTGAGCAAGATCGGGGCATCTTaGCGGCGAAGGCGGCGGCCC +
Preference number: 4 (lower is better)
Translates to: ASLAKVAQNLLGDSQSLSKIGAS*RRRRRP
Trigger: GGGCCGCCGCCTTCGCCGCCAAGATGCCCCGATCTT...GCTCAAGGACTGGGAGTCTCCCAGCAAGTTCTGTGCAACTTTTGCAAGACTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp CCTCCCACTGGCCCAGTGAGCCTGGGCCGGGAGCTTCAGCAAGCAGCGCTTCTCAGTAACAGCTGGTCCTaGAGAAGAACTGGGGAATAT +
Preference number: 4 (lower is better)
Translates to: PPTGPVSLGRELQQAALLSNSWS*RRTGEY
Trigger: ATATTCCCCAGTTCTTCTCCAGGACCAGCTGTTACT...GAGAAGCGCTGCTTGCTGAAGCTCCCGGCCCAGGCTCACTGGGCCAGTGGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484418.1
ENST00000635167.1
CDS-3UTR CCA 90 bp GCTCTTCACCTCCGCGATGAGCAGCTTTGTGAGGTCGTGCGGCTCCCCATCATGAGCGCAGGCCCAATCTaGCTCTTTCCTTCTGCCATC +
Preference number: 4 (lower is better)
Translates to: ALHLRDEQLCEVVRLPIMSAGPI*LFPSAI
Trigger: GATGGCAGAAGGAAAGAGCCAGATTGGGCCTGCGCT...CATGATGGGGAGCCGCACGACCTCACAAAGCTGCTCATCGCGGAGGTGAAGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR TCA 90 bp CAGCTGTGTTGGCCATTGGTGCTCTCTAGTCTCCCCTGCTTGGCTTGGCCCATTCAGCAACCTCGCGGGTaGACACGGCCAAGTTTAGGA +
Preference number: 4 (lower is better)
Translates to: QLCWPLVLSSLPCLAWPIQQPRG*TRPSLG
Trigger: TCCTAAACTTGGCCGTGTTCACCCGCGAGGTTGCTG...AATGGGCCAAGCCAAGCAGGGGAGACTAGAGAGCACCAATGGCCAACACAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000618240.4
ENST00000634561.2
ENST00000635693.1
CDS-3UTR TCA 90 bp TCCAGCCACAGGGCTCCCAGGCCCCTAGCGGGTAATGAGATAGGAAAGAACCGCTCTGAATCAGGTTCTTaGAGAGCGCAGCAACCTCGC +
Preference number: 4 (lower is better)
Translates to: SSHRAPRPLAGNEIGKNRSESGS*RAQQPR
Trigger: GCGAGGTTGCTGCGCTCTTCAAGAACCTGATTCAGA...GCGGTTCTTTCCTATCTCATTACCCGCTAGGGGCCTGGGAGCCCTGTGGCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000618240.4
ENST00000634561.2
ENST00000635693.1
CDS-3UTR TCA 90 bp TGTTCTGCAACACTGACACCCACGCCTCACACTCGTGCTCGTCCTCTGCCTGAATCGTCCTCCTGGGCCTaGTGGAGTGCATGTACTGAG +
Preference number: 4 (lower is better)
Translates to: CSATLTPTPHTRARPLPESSSWA*WSACTE
Trigger: CTCAGTACATGCACTCCATCAGGCCCAGGAGGACGA...TTCAGGCAGAGGACGAGCACGAGTGTGAGGCGTGGGTGTCAGTGTTGCAGAACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR TCA 90 bp ACCGCCATCAGTCCTAACAGGGAAAGGCCATGTGTCCTTGGTAGAGGCATGGCCTCGTCCTCCTGGGCCTaGTGGAGTGCATGTACTGAG +
Preference number: 4 (lower is better)
Translates to: TAISPNRERPCVLGRGMASSSWA*WSACTE
Trigger: CTCAGTACATGCACTCCATCAGGCCCAGGAGGACGA...GGCCATGCCTCTACCAAGGACACATGGCCTTTCCCTGTTAGGACTGATGGCGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000492982.6
ENST00000634561.2
ENST00000634705.1
CDS-3UTR TCA 90 bp CAGCTGTGTTGGCCATTGGTGCTCTCTAGTCTCCCCTGCTTGGCTTGGCCCATTTGCTCGTCCTCTGCCTaGAAGTGGTACGTCCGGTTG +
Preference number: 4 (lower is better)
Translates to: QLCWPLVLSSLPCLAWPICSSSA*KWYVRL
Trigger: CAACCGGACGTACCACTTTCAGGCAGAGGACGAGCA...AATGGGCCAAGCCAAGCAGGGGAGACTAGAGAGCACCAATGGCCAACACAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR TCA 90 bp TGTTCTGCAACACTGACACCCACGCCTCACACTCGTGCTCGTCCTCTGCCTGAAGCTGTTCTGCAACACTaGCACCCACGCCTCACACTC +
Preference number: 4 (lower is better)
Translates to: CSATLTPTPHTRARPLPEAVLQH*HPRLTL
Trigger: GAGTGTGAGGCGTGGGTGTCAGTGTTGCAGAACAGC...TTCAGGCAGAGGACGAGCACGAGTGTGAGGCGTGGGTGTCAGTGTTGCAGAACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR TCA 90 bp ACAACCCTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCGCTGTTCTGCAACACTaGCACCCACGCCTCACACTC +
Preference number: 4 (lower is better)
Translates to: TTLFLWEPQTSQVSRGNSAVLQH*HPRLTL
Trigger: GAGTGTGAGGCGTGGGTGTCAGTGTTGCAGAACAGC...GCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAGGGTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR TCA 90 bp GGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGGTATCTGAAGTGCCTAACCAGGTCCAAGGTGAGTaGCTGCATGCGCGAAAAGCG +
Preference number: 4 (lower is better)
Translates to: GPPLQGPCLTRVVSEVPNQVQGE*LHARKA
Trigger: CGCTTTTCGCGCATGCAGTCACTCACCTTGGACCTG...GTTAGGCACTTCAGATACCACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR TCA 90 bp CCTTGTGAAGCCCCCAGACTGACGGGGGAAATAGAGTCTCGATCTGATGAGGGACATGTCACTCTCAGCTaGGGGTTTAGGGCCGCCGTG +
Preference number: 4 (lower is better)
Translates to: PCEAPRLTGEIESRSDEGHVTLS*GFRAAV
Trigger: CACGGCGGCCCTAAACCCTCAGCTGAGAGTGACATG...TCCCTCATCAGATCGAGACTCTATTTCCCCCGTCAGTCTGGGGGCTTCACAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR TCA 90 bp TCTCGATCTGATGAGGGACTGAGAGTTCTGCAGCTGAAGCCAGCTCAGGAGCACCCTTCAGCAGCAGCTTaGGGCAGTCGGGCTGGTTGT +
Preference number: 4 (lower is better)
Translates to: SRSDEGLRVLQLKPAQEHPSAAA*GSRAGC
Trigger: ACAACCAGCCCGACTGCCTCAAGCTGCTGCTGAAGG...GTGCTCCTGAGCTGGCTTCAGCTGCAGAACTCTCAGTCCCTCATCAGATCGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR TCA 90 bp CCTGCCTATTCCCAAGCCCAACCCTTAAGACCAGCTTTCCACCAAAGGACCACCCCTTCAGCAGCAGCTTaGGGCAGTCGGGCTGGTTGT +
Preference number: 4 (lower is better)
Translates to: PAYSQAQPLRPAFHQRTTPSAAA*GSRAGC
Trigger: ACAACCAGCCCGACTGCCTCAAGCTGCTGCTGAAGG...GGTGGTCCTTTGGTGGAAAGCTGGTCTTAAGGGTTGGGCTTGGGAATAGGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR TCA 90 bp GACCAGCTTTCCACCAAAGGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGCATAGGTCTTGTTGCTaGTGTCCAGCCTCCCACTGG +
Preference number: 4 (lower is better)
Translates to: DQLSTKGPPLQGPCLTRVHRSCC*CPASHW
Trigger: CCAGTGGGAGGCTGGACATCAGCAACAAGACCTATG...CACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGCTGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR TCA 90 bp AGGGCTCCCAGGCCCCTAGCGGGTAATGAGATAGGAAAGAACCGCCATCAGTCCCATAGGTCTTGTTGCTaGTGTCCAGCCTCCCACTGG +
Preference number: 4 (lower is better)
Translates to: RAPRPLAGNEIGKNRHQSHRSCC*CPASHW
Trigger: CCAGTGGGAGGCTGGACATCAGCAACAAGACCTATG...GGACTGATGGCGGTTCTTTCCTATCTCATTACCCGCTAGGGGCCTGGGAGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
ENST00000635461.1
CDS-3UTR TCA 90 bp GGCCCTTGTCTTACTCGTGTGGTATCTGAAGTGCCTAACACAGGTCCAGACATATCCTCACTCTCGCCCTaGGGGGTGGCTGCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: GPCLTRVVSEVPNTGPDISSLSP*GVAAPR
Trigger: CCTGGGAGCAGCCACCCCTCAGGGCGAGAGTGAGGA...TATGTCTGGACCTGTGTTAGGCACTTCAGATACCACACGAGTAAGACAAGGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR TCA 90 bp CAGCTGTGTTGGCCATTGGTGCTCTCTAGTCTCCCCTGCTTGGCTTGGCCCATTTCCGAGAAGAGTTTTTaGCTGGCAAGGGCGGGGGAC +
Preference number: 4 (lower is better)
Translates to: QLCWPLVLSSLPCLAWPISEKSF*LARAGD
Trigger: GTCCCCCGCCCTTGCCAGTCAAAAACTCTTCTCGGA...AATGGGCCAAGCCAAGCAGGGGAGACTAGAGAGCACCAATGGCCAACACAGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR TCA 90 bp CCACCGTTCTGGATGATGAAATCCACCAGAGGCAGGGAAGCCTGGTTGGCGACTTCCGAGAAGAGTTTTTaGCTGGCAAGGGCGGGGGAC +
Preference number: 4 (lower is better)
Translates to: PPFWMMKSTRGREAWLATSEKSF*LARAGD
Trigger: GTCCCCCGCCCTTGCCAGTCAAAAACTCTTCTCGGA...AGTCGCCAACCAGGCTTCCCTGCCTCTGGTGGATTTCATCATCCAGAACGGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR TCA 90 bp TGCCCTTGTGAAGCCCCCAGACTGACGGGGGAAATAGAGTCTCGATCTGATGAGGGTCTCAGGGGCCTCTaGACTCAGGCTGGAGACTTC +
Preference number: 4 (lower is better)
Translates to: CPCEAPRLTGEIESRSDEGLRGL*TQAGDF
Trigger: GAAGTCTCCAGCCTGAGTTCAGAGGCCCCTGAGACC...CTCATCAGATCGAGACTCTATTTCCCCCGTCAGTCTGGGGGCTTCACAAGGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR TCA 90 bp TCTCGATCTGATGAGGGACTGAGAGTTCTGCAGCTGAAGCCAGCTCAGGAGCACGGTCTCAGGGGCCTCTaGACTCAGGCTGGAGACTTC +
Preference number: 4 (lower is better)
Translates to: SRSDEGLRVLQLKPAQEHGLRGL*TQAGDF
Trigger: GAAGTCTCCAGCCTGAGTTCAGAGGCCCCTGAGACC...GTGCTCCTGAGCTGGCTTCAGCTGCAGAACTCTCAGTCCCTCATCAGATCGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
ENST00000635461.1
CDS-3UTR TCA 90 bp ACCCTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCACAAGCCATCTCCTTCAGTaGTGCCAACCGGCACGTTCC +
Preference number: 4 (lower is better)
Translates to: TLFLWEPQTSQVSRGNSTSHLLQ*CQPARS
Trigger: GGAACGTGCCGGTTGGCATCACTGAAGGAGATGGCT...TGTGCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR TCA 90 bp ACCGCCATCAGTCCTAACAGGGAAAGGCCATGTGTCCTTGGTAGAGGCATGGCCAGCCATCTCCTTCAGTaGTGCCAACCGGCACGTTCC +
Preference number: 4 (lower is better)
Translates to: TAISPNRERPCVLGRGMASHLLQ*CQPARS
Trigger: GGAACGTGCCGGTTGGCATCACTGAAGGAGATGGCT...GGCCATGCCTCTACCAAGGACACATGGCCTTTCCCTGTTAGGACTGATGGCGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000492982.6
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635461.1
ENST00000635693.1
CDS-3UTR TCA 90 bp GCTCTTCACCTCCGCGATGAGCAGCTTTGTGAGGTCGTGCGGCTCCCCATCATGGAGACTCCCAGTCCTTaGGCCATCTCCTTCAGTGAT +
Preference number: 4 (lower is better)
Translates to: ALHLRDEQLCEVVRLPIMETPSP*AISFSD
Trigger: ATCACTGAAGGAGATGGCTCAAGGACTGGGAGTCTC...CATGATGGGGAGCCGCACGACCTCACAAAGCTGCTCATCGCGGAGGTGAAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR TCA 90 bp AGGGTCCCTGATCTGGAAGTCAGTGATGGAGGGCTCTCCTGCCCTTGTGAAGCCCTCAAGTCCCAGCTCTaGACATTGGGGCCTAGCATG +
Preference number: 4 (lower is better)
Translates to: RVPDLEVSDGGLSCPCEALKSQL*TLGPSM
Trigger: CATGCTAGGCCCCAATGTTCAGAGCTGGGACTTGAG...GGCTTCACAAGGGCAGGAGAGCCCTCCATCACTGACTTCCAGATCAGGGACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR TCA 90 bp AGGTATAAACCAGCTGAGTCCAGAGCCATGCCCTGGAATCTGACCCTGCCTATTGCTCTCCTGCCCTTGTaGAGCCCCCAGACTGACGGG +
Preference number: 4 (lower is better)
Translates to: RYKPAESRAMPWNLTLPIALLPL*SPQTDG
Trigger: CCCGTCAGTCTGGGGGCTTCACAAGGGCAGGAGAGC...AATAGGCAGGGTCAGATTCCAGGGCATGGCTCTGGACTCAGCTGGTTTATACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR GCA 90 bp ACCCTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCACAGGGACAGGTGGCTGTTaGCTAAGGATTCCACGGCCT +
Preference number: 4 (lower is better)
Translates to: TLFLWEPQTSQVSRGNSTGTGGC*LRIPRP
Trigger: AGGCCGTGGAATCCTTAGGCAACAGCCACCTGTCCC...TGTGCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000618240.4
ENST00000634561.2
ENST00000635693.1
CDS-3UTR GCA 90 bp GAGGGACTGAGAGTTCTGCAGCTGAAGCCAGCTCAGGAGCACTCAGATCCAGCCAGGAAGTCAGGACCTTaGTTCATCTGGCTCTCCCCG +
Preference number: 4 (lower is better)
Translates to: EGLRVLQLKPAQEHSDPARKSGP*FIWLSP
Trigger: CGGGGAGAGCCAGATGAAGCAAGGTCCTGACTTCCT...GGCTGGATCTGAGTGCTCCTGAGCTGGCTTCAGCTGCAGAACTCTCAGTCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR GCA 90 bp CAAGCCCAACCCTTAAGACCAGCTTTCCACCAAAGGACCACCCCTGCAGGGCCCTCCCAAACTGCTTGTTaGCTTGGTGCTGGTGGATGC +
Preference number: 4 (lower is better)
Translates to: QAQPLRPAFHQRTTPAGPSQTAC*LGAGGC
Trigger: GCATCCACCAGCACCAAGGCAACAAGCAGTTTGGGA...GGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGCTGGTCTTAAGGGTTGGGCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR GCA 90 bp CGCCTCACACTCGTGCTCGTCCTCTGCCTGAAAGTGGTACGTCCGGTTGTGGGTTTCTCCGTCCCAAACTaGTTGTTGCCTTGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: RLTLVLVLCLKVVRPVVGFSVPN*LLPWCW
Trigger: CCAGCACCAAGGCAACAAGCAGTTTGGGACGGAGAA...ACCCACAACCGGACGTACCACTTTCAGGCAGAGGACGAGCACGAGTGTGAGGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR GCA 90 bp CTCGTGCTCGTCCTCTGCCTGAAAGTGGTACGTCCGGTTGTGGGTCACCAGGTCTTCTCCGTCCCAAACTaGTTGTTGCCTTGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: LVLVLCLKVVRPVVGHQVFSVPN*LLPWCW
Trigger: CCAGCACCAAGGCAACAAGCAGTTTGGGACGGAGAA...GACCTGGTGACCCACAACCGGACGTACCACTTTCAGGCAGAGGACGAGCACGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR GCA 90 bp ACAACCCTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCCTCGTGCTCGTCCTCTaGCTGAAAGTGGTACGTCCG +
Preference number: 4 (lower is better)
Translates to: TTLFLWEPQTSQVSRGNSLVLVL*LKVVRP
Trigger: CGGACGTACCACTTTCAGGCAGAGGACGAGCACGAG...GCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAGGGTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR GCA 90 bp GTCGACCGTCCCTCAGCTGCCCCTTCATCAGACTGTCCAGGGGGAAAGAGACAATCGTCCTTGCTGTTCTaGAACACTGACACCCACGCC +
Preference number: 4 (lower is better)
Translates to: VDRPSAAPSSDCPGGKRQSSLLF*NTDTHA
Trigger: GGCGTGGGTGTCAGTGTTGCAGAACAGCAAGGACGA...TTGTCTCTTTCCCCCTGGACAGTCTGATGAAGGGGCAGCTGAGGGACGGTCGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR GCA 90 bp CACCAGAGGCAGGGAAGCCTGGTTGGCGACTTTGACAGCCAAATGCAAGACGAGTGTAGTCCCTGCGGGTaGCCATGTCACTCTCAGCTG +
Preference number: 4 (lower is better)
Translates to: HQRQGSLVGDFDSQMQDECSPCG*PCHSQL
Trigger: CAGCTGAGAGTGACATGGGCACCCGCAGGGACTACA...CTCGTCTTGCATTTGGCTGTCAAAGTCGCCAACCAGGCTTCCCTGCCTCTGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
CDS-3UTR GCA 90 bp TTCCCAGGCCTGCTCTTCACCTCCGCGATGAGCAGCTTTGTGAGGTCGTGCGGCCGGCGTGCAAACCTATaGTCCACATACTTGGCCATA +
Preference number: 4 (lower is better)
Translates to: FPGLLFTSAMSSFVRSCGRRANL*STYLAI
Trigger: TATGGCCAAGTATGTGGAGCATAGGTTTGCACGCCG...GCCGCACGACCTCACAAAGCTGCTCATCGCGGAGGTGAAGAGCAGGCCTGGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR GCA 90 bp CAGCTGTGTTGGCCATTGGTGCTCTCTAGTCTCCCCTGCTTGGCTTGGCCCATTGGCTGTCCAAAGTCCTaGCCATTGGCAAAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: QLCWPLVLSSLPCLAWPIGCPKS*PLAKAS
Trigger: GGAGGCCTTTGCCAATGGGCAGGACTTTGGACAGCC...AATGGGCCAAGCCAAGCAGGGGAGACTAGAGAGCACCAATGGCCAACACAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR GCA 90 bp TCTCGATCTGATGAGGGACTGAGAGTTCTGCAGCTGAAGCCAGCTCAGGAGCACTTCTTCAGGTGCCTGTaGATCAGGCCCTGGCAGCGG +
Preference number: 4 (lower is better)
Translates to: SRSDEGLRVLQLKPAQEHFFRCL*IRPWQR
Trigger: CCGCTGCCAGGGCCTGATGCACAGGCACCTGAAGAA...GTGCTCCTGAGCTGGCTTCAGCTGCAGAACTCTCAGTCCCTCATCAGATCGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR GCA 90 bp ACAACCCTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCGGGCTGGTTGTAGAGTaGTGCGTAGTGCAGAGCCGT +
Preference number: 4 (lower is better)
Translates to: TTLFLWEPQTSQVSRGNSGLVVE*CVVQSR
Trigger: ACGGCTCTGCACTACGCAGCACTCTACAACCAGCCC...GCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAGGGTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR GCA 90 bp AGCAGGTCCAAGGTGAGTGACTGCATGCGCGAAAAGCGCACGCCCAGTTCGCGGTCACACTCCTTGTGGTaGTTCTTCCTGGCTATGTCC +
Preference number: 4 (lower is better)
Translates to: SRSKVSDCMREKRTPSSRSHSLW*FFLAMS
Trigger: GGACATAGCCAGGAAGAAGCACCACAAGGAGTGTGA...CCGCGAACTGGGCGTGCGCTTTTCGCGCATGCAGTCACTCACCTTGGACCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR GCA 90 bp GGCCCTTGTCTTACTCGTGTGGTATCTGAAGTGCCTAACACAGGTCCAGACATAGTCCCCGCCTGGGCCTaGTCCAGCAGCTCCTCACAC +
Preference number: 4 (lower is better)
Translates to: GPCLTRVVSEVPNTGPDIVPAWA*SSSSSH
Trigger: GTGTGAGGAGCTGCTGGAGCAGGCCCAGGCGGGGAC...TATGTCTGGACCTGTGTTAGGCACTTCAGATACCACACGAGTAAGACAAGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR GCA 90 bp GAGTCTCGATCTGATGAGGGACTGAGAGTTCTGCAGCTGAAGCCAGCTCAGGAGCTTCTGGGCAGAGGCTaGCTGGCTGAGGGACCATCT +
Preference number: 4 (lower is better)
Translates to: ESRSDEGLRVLQLKPAQELLGRG*LAEGPS
Trigger: AGATGGTCCCTCAGCCAGGCAGCCTCTGCCCAGAAG...CTCCTGAGCTGGCTTCAGCTGCAGAACTCTCAGTCCCTCATCAGATCGAGACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635461.1
ENST00000635693.1
CDS-3UTR GCA 90 bp ACAACCCTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCCCAAAGGACCACCCCTaGAGGGCCCTTGTCTTACTC +
Preference number: 4 (lower is better)
Translates to: TTLFLWEPQTSQVSRGNSPKDHP*RALVLL
Trigger: GAGTAAGACAAGGGCCCTGCAGGGGTGGTCCTTTGG...GCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAGGGTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR GCA 90 bp CAGCTGTGTTGGCCATTGGTGCTCTCTAGTCTCCCCTGCTTGGCTTGGCCCATTCCAAAGGACCACCCCTaGAGGGCCCTTGTCTTACTC +
Preference number: 4 (lower is better)
Translates to: QLCWPLVLSSLPCLAWPIPKDHP*RALVLL
Trigger: GAGTAAGACAAGGGCCCTGCAGGGGTGGTCCTTTGG...AATGGGCCAAGCCAAGCAGGGGAGACTAGAGAGCACCAATGGCCAACACAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR GCA 90 bp CTGTGGAAATTACCCAGGAGTAGTCCACATGTAGAGGGAAGGCAAAGGTCCCCGAGGGGTTCTCACCTGTaGATCAGGCCCTGGCAGCGG +
Preference number: 4 (lower is better)
Translates to: LWKLPRSSPHVEGRQRSPRGSHL*IRPWQR
Trigger: CCGCTGCCAGGGCCTGATGCACAGGTGAGAACCCCT...CGGGGACCTTTGCCTTCCCTCTACATGTGGACTACTCCTGGGTAATTTCCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484418.1
ENST00000635167.1
CDS-3UTR CCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGGGTACCGGGGCATCTTaGCGGCGAAGGCGGCGGCCC +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKGTGAS*RRRRRP
Trigger: GGGCCGCCGCCTTCGCCGCCAAGATGCCCCGGTACC...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000618240.4
ENST00000634561.2
ENST00000635198.1
ENST00000635693.1
CDS-3UTR CCA 90 bp AAATTACCCAGGAGTAGTCCACATGTAGAGGGAAGGCAAAGGTCCCCGCCTGGGCCAAGGCCGGAGCTATaGATTGCCCGCACAGCCTTC +
Preference number: 4 (lower is better)
Translates to: KLPRSSPHVEGRQRSPPGPRPEL*IARTAF
Trigger: GAAGGCTGTGCGGGCAATCCATAGCTCCGGCCTTGG...CCCAGGCGGGGACCTTTGCCTTCCCTCTACATGTGGACTACTCCTGGGTAATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp GAGTCTCGATCTGATGAGGGACTGAGAGTTCTGCAGCTGAAGCCAGCTCAGGAGCCAAGGCCGGAGCTATaGATTGCCCGCACAGCCTTC +
Preference number: 4 (lower is better)
Translates to: ESRSDEGLRVLQLKPAQEPRPEL*IARTAF
Trigger: GAAGGCTGTGCGGGCAATCCATAGCTCCGGCCTTGG...CTCCTGAGCTGGCTTCAGCTGCAGAACTCTCAGTCCCTCATCAGATCGAGACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000618240.4
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp CCTGCCTATTCCCAAGCCCAACCCTTAAGACCAGCTTTCCACCAAAGGACCACCCCAAGGCCGGAGCTATaGATTGCCCGCACAGCCTTC +
Preference number: 4 (lower is better)
Translates to: PAYSQAQPLRPAFHQRTTPRPEL*IARTAF
Trigger: GAAGGCTGTGCGGGCAATCCATAGCTCCGGCCTTGG...GGTGGTCCTTTGGTGGAAAGCTGGTCTTAAGGGTTGGGCTTGGGAATAGGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000618240.4
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp GCTTTGAGCAGATACTCACACATGTGCAGCTGGAAGATGCGCCGCTCTCTCTGCTCTCTCTGCATGTCCTaGGCCACCTCCCCAGGGATC +
Preference number: 4 (lower is better)
Translates to: ALSRYSHMCSWKMRRSLCSLCMS*ATSPGI
Trigger: GATCCCTGGGGAGGTGGCCCAGGACATGCAGAGAGA...GCAGAGAGAGCGGCGCATCTTCCAGCTGCACATGTGTGAGTATCTGCTCAAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp CCACGGCCTCTCGGTACTGCTCTTCATTCTCCACATGGCCAAGGCCGGAGCTATTCACACATGTGCAGCTaGAAGATGCGCCGCTCTCTC +
Preference number: 4 (lower is better)
Translates to: PRPLGTALHSPHGQGRSYSHMCS*KMRRSL
Trigger: GAGAGAGCGGCGCATCTTCCAGCTGCACATGTGTGA...ATAGCTCCGGCCTTGGCCATGTGGAGAATGAAGAGCAGTACCGAGAGGCCGTGG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp ATCAGGTTCTTGAAGAGCGCAGCAACCTCGCGGGTGAACACGGCCAAGTTTAGGAGGGAGTCCCGGAGCTaGGTCAGCTTCTGTAGCTCG +
Preference number: 4 (lower is better)
Translates to: IRFLKSAATSRVNTAKFRRESRS*VSFCSS
Trigger: CGAGCTACAGAAGCTGACCCAGCTCCGGGACTCCCT...CCTAAACTTGGCCGTGTTCACCCGCGAGGTTGCTGCGCTCTTCAAGAACCTGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp TGTTCTGCAACACTGACACCCACGCCTCACACTCGTGCTCGTCCTCTGCCTGAATGGTACGTCCGGTTGTaGGTCACCAGGTCGAAGCAC +
Preference number: 4 (lower is better)
Translates to: CSATLTPTPHTRARPLPEWYVRL*VTRSKH
Trigger: GTGCTTCGACCTGGTGACCCACAACCGGACGTACCA...TTCAGGCAGAGGACGAGCACGAGTGTGAGGCGTGGGTGTCAGTGTTGCAGAACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR CCA 90 bp GCACCCAGCAACTGGCAAGTTGAGATGTTAGTGGTTGATGATGGCTTAGGTGTATGCGGCTCCCCATCATaGCCGGCGGACCCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: APSNWQVEMLVVDDGLGVCGSPS*PADPQD
Trigger: GTCCTGGGGGTCCGCCGGCCATGATGGGGAGCCGCA...TACACCTAAGCCATCATCAACCACTAACATCTCAACTTGCCAGTTGCTGGGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR CCA 90 bp AAAGAACCGCCATCAGTCCTAACAGGGAAAGGCCATGTGTCCTTGGTAGAGGCATGGACGCCCGAGCACTaGATGCAGGTGAGCACGCCC +
Preference number: 4 (lower is better)
Translates to: KEPPSVLTGKGHVSLVEAWTPEH*MQVSTP
Trigger: GGGCGTGCTCACCTGCATCCAGTGCTCGGGCGTCCA...TGCCTCTACCAAGGACACATGGCCTTTCCCTGTTAGGACTGATGGCGGTTCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000492982.6
ENST00000634561.2
ENST00000634705.1
CDS-3UTR CCA 90 bp AGGGCTCCCAGGCCCCTAGCGGGTAATGAGATAGGAAAGAACCGCCATCAGTCCGGTCCCTGTTGCAAATaGCTGTCCAGAGTCGCTGAG +
Preference number: 4 (lower is better)
Translates to: RAPRPLAGNEIGKNRHQSGPCCK*LSRVAE
Trigger: CTCAGCGACTCTGGACAGCCATTTGCAACAGGGACC...GGACTGATGGCGGTTCTTTCCTATCTCATTACCCGCTAGGGGCCTGGGAGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CCA 90 bp CTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCACAGCCCAAAGTCCTGCCCATTaGCAAAGGCCTCCAGTACCG +
Preference number: 4 (lower is better)
Translates to: LFLWEPQTSQVSRGNSTAQSPAH*QRPPVP
Trigger: CGGTACTGGAGGCCTTTGCCAATGGGCAGGACTTTG...GGCTGTGCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CCA 90 bp GGCATCCAGGTGACCACCGTTCTGGATGATGAAATCCACCAGAGGCAGGGAAGCAGAGGCAGGGAAGCCTaGTTGGCGACTTTGACAGCC +
Preference number: 4 (lower is better)
Translates to: GIQVTTVLDDEIHQRQGSRGREA*LATLTA
Trigger: GGCTGTCAAAGTCGCCAACCAGGCTTCCCTGCCTCT...GCTTCCCTGCCTCTGGTGGATTTCATCATCCAGAACGGTGGTCACCTGGATGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
CDS-3UTR CCA 90 bp TCTCGATCTGATGAGGGACTGAGAGTTCTGCAGCTGAAGCCAGCTCAGGAGCACTCCCGTCAGCAGCCTTaGCATCCAGGTGACCACCGT +
Preference number: 4 (lower is better)
Translates to: SRSDEGLRVLQLKPAQEHSRQQP*HPGDHR
Trigger: ACGGTGGTCACCTGGATGCCAAGGCTGCTGACGGGA...GTGCTCCTGAGCTGGCTTCAGCTGCAGAACTCTCAGTCCCTCATCAGATCGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CCA 90 bp GGCCCTTGTCTTACTCGTGTGGTATCTGAAGTGCCTAACACAGGTCCAGACATAGCAAAGGTCCCCGCCTaGGCCTGCTCCAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: GPCLTRVVSEVPNTGPDIAKVPA*ACSSSS
Trigger: GGAGCTGCTGGAGCAGGCCCAGGCGGGGACCTTTGC...TATGTCTGGACCTGTGTTAGGCACTTCAGATACCACACGAGTAAGACAAGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CCA 90 bp GGCCCTTGTCTTACTCGTGTGGTATCTGAAGTGCCTAACACAGGTCCAGACATATGTCCAGCCTCCCACTaGCCCAGTGAGCCTGGGCCG +
Preference number: 4 (lower is better)
Translates to: GPCLTRVVSEVPNTGPDICPASH*PSEPGP
Trigger: CGGCCCAGGCTCACTGGGCCAGTGGGAGGCTGGACA...TATGTCTGGACCTGTGTTAGGCACTTCAGATACCACACGAGTAAGACAAGGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CCA 90 bp GATAGGAAAGAACCGCCATCAGTCCTAACAGGGAAAGGCCATGTGTCCTTGGTATGTCCAGCCTCCCACTaGCCCAGTGAGCCTGGGCCG +
Preference number: 4 (lower is better)
Translates to: DRKEPPSVLTGKGHVSLVCPASH*PSEPGP
Trigger: CGGCCCAGGCTCACTGGGCCAGTGGGAGGCTGGACA...TACCAAGGACACATGGCCTTTCCCTGTTAGGACTGATGGCGGTTCTTTCCTATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000492982.6
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635461.1
CDS-3UTR CCA 90 bp TCTGCAACACTGACACCCACGCCTCACACTCGTGCTCGTCCTCTGCCTGAAAGTTGGCTGCTCCCAGGCTaGCGACAGTCTCATAGGTCT +
Preference number: 4 (lower is better)
Translates to: SATLTPTPHTRARPLPESWLLPG*RQSHRS
Trigger: AGACCTATGAGACTGTCGCCAGCCTGGGAGCAGCCA...ACTTTCAGGCAGAGGACGAGCACGAGTGTGAGGCGTGGGTGTCAGTGTTGCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp TCCAGCCACAGGGCTCCCAGGCCCCTAGCGGGTAATGAGATAGGAAAGAACCGCAGAAGAGTTTTTGACTaGCAAGGGCGGGGGACAGTC +
Preference number: 4 (lower is better)
Translates to: SSHRAPRPLAGNEIGKNRRRVFD*QGRGTV
Trigger: GACTGTCCCCCGCCCTTGCCAGTCAAAAACTCTTCT...GCGGTTCTTTCCTATCTCATTACCCGCTAGGGGCCTGGGAGCCCTGTGGCTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CCA 90 bp AGCCCACTTTCTCCGTCCCAAACTGCTTGTTGCCTTGGTGCTGGTGGATGCTATTGGGTGGGGCTTGGCTaGGATCCCCAGGTTCCAAGG +
Preference number: 4 (lower is better)
Translates to: SPLSPSQTACCLGAGGCYWVGLG*DPQVPR
Trigger: CCTTGGAACCTGGGGATCCCAGCCAAGCCCCACCCA...ATAGCATCCACCAGCACCAAGGCAACAAGCAGTTTGGGACGGAGAAAGTGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp TCTCGATCTGATGAGGGACTGAGAGTTCTGCAGCTGAAGCCAGCTCAGGAGCACCTCTTCAGAGTTGGGTaGGGCTTGGCTGGGATCCCC +
Preference number: 4 (lower is better)
Translates to: SRSDEGLRVLQLKPAQEHLFRVG*GLAGIP
Trigger: GGGGATCCCAGCCAAGCCCCACCCAACTCTGAAGAG...GTGCTCCTGAGCTGGCTTCAGCTGCAGAACTCTCAGTCCCTCATCAGATCGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635461.1
ENST00000635693.1
CDS-3UTR CCA 90 bp CCACATCCTGAGTTCTTCCGGCTCAGGTGTTCCTCTCTGCTCTCAAGCTGCAGTCTCTTCAGAGTTGGGTaGGGCTTGGCTGGGATCCCC +
Preference number: 4 (lower is better)
Translates to: PHPEFFRLRCSSLLSSCSLFRVG*GLAGIP
Trigger: GGGGATCCCAGCCAAGCCCCACCCAACTCTGAAGAG...ACTGCAGCTTGAGAGCAGAGAGGAACACCTGAGCCGGAAGAACTCAGGATGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp AAAGTGGTACGTCCGGTTGTGGGTCACCAGGTCGAAGCACTTTTTCTCCTCAGGATGTCAGGCTGGGTCTaGAGGTGCCTGGGGGCTCTC +
Preference number: 4 (lower is better)
Translates to: KVVRPVVGHQVEALFLLRMSGWV*RCLGAL
Trigger: GAGAGCCCCCAGGCACCTCCAGACCCAGCCTGACAT...CCTGAGGAGAAAAAGTGCTTCGACCTGGTGACCCACAACCGGACGTACCACTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp TCTCGATCTGATGAGGGACTGAGAGTTCTGCAGCTGAAGCCAGCTCAGGAGCACACATCTCCGAAGGGGTaGTCCCGGATGTCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: SRSDEGLRVLQLKPAQEHTSPKG*SRMSGW
Trigger: CCAGCCTGACATCCGGGACCACCCCTTCGGAGATGT...GTGCTCCTGAGCTGGCTTCAGCTGCAGAACTCTCAGTCCCTCATCAGATCGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635461.1
ENST00000635693.1
CDS-3UTR CCA 90 bp AAATTACCCAGGAGTAGTCCACATGTAGAGGGAAGGCAAAGGTCCCCGCCTGGGACATCTCCGAAGGGGTaGTCCCGGATGTCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: KLPRSSPHVEGRQRSPPGTSPKG*SRMSGW
Trigger: CCAGCCTGACATCCGGGACCACCCCTTCGGAGATGT...CCCAGGCGGGGACCTTTGCCTTCCCTCTACATGTGGACTACTCCTGGGTAATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp CCTGCCTATTCCCAAGCCCAACCCTTAAGACCAGCTTTCCACCAAAGGACCACCTGGGCAGAGGCTGCCTaGCTGAGGGACCATCTTCAG +
Preference number: 4 (lower is better)
Translates to: PAYSQAQPLRPAFHQRTTWAEAA*LRDHLQ
Trigger: CTGAAGATGGTCCCTCAGCCAGGCAGCCTCTGCCCA...GGTGGTCCTTTGGTGGAAAGCTGGTCTTAAGGGTTGGGCTTGGGAATAGGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp TGCCCTTGTGAAGCCCCCAGACTGACGGGGGAAATAGAGTCTCGATCTGATGAGTGGGCAGAGGCTGCCTaGCTGAGGGACCATCTTCAG +
Preference number: 4 (lower is better)
Translates to: CPCEAPRLTGEIESRSDEWAEAA*LRDHLQ
Trigger: CTGAAGATGGTCCCTCAGCCAGGCAGCCTCTGCCCA...CTCATCAGATCGAGACTCTATTTCCCCCGTCAGTCTGGGGGCTTCACAAGGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp GAGTCTCGATCTGATGAGGGACTGAGAGTTCTGCAGCTGAAGCCAGCTCAGGAGTGGGCAGAGGCTGCCTaGCTGAGGGACCATCTTCAG +
Preference number: 4 (lower is better)
Translates to: ESRSDEGLRVLQLKPAQEWAEAA*LRDHLQ
Trigger: CTGAAGATGGTCCCTCAGCCAGGCAGCCTCTGCCCA...CTCCTGAGCTGGCTTCAGCTGCAGAACTCTCAGTCCCTCATCAGATCGAGACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635461.1
ENST00000635693.1
CDS-3UTR CCA 90 bp ACAACCCTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCCCCAGCTCTGAACATTaGGGCCTAGCATGGGGCATG +
Preference number: 4 (lower is better)
Translates to: TTLFLWEPQTSQVSRGNSPSSEH*GLAWGM
Trigger: CATGCCCCATGCTAGGCCCCAATGTTCAGAGCTGGG...GCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAGGGTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp GCTTTCCACCAAAGGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGGTATCCCCAGCTCTGAACATTaGGGCCTAGCATGGGGCATG +
Preference number: 4 (lower is better)
Translates to: AFHQRTTPAGPLSYSCGIPSSEH*GLAWGM
Trigger: CATGCCCCATGCTAGGCCCCAATGTTCAGAGCTGGG...GATACCACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp GACCAGCTTTCCACCAAAGGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGTCCTTGGTAGAGGCATaGCCTGTGGCAGGAAGAAGG +
Preference number: 4 (lower is better)
Translates to: DQLSTKGPPLQGPCLTRVSLVEA*PVAGRR
Trigger: CCTTCTTCCTGCCACAGGCCATGCCTCTACCAAGGA...CACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGCTGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp AGGGTCCCTGATCTGGAAGTCAGTGATGGAGGGCTCTCCTGCCCTTGTGAAGCCTCCTTGGTAGAGGCATaGCCTGTGGCAGGAAGAAGG +
Preference number: 4 (lower is better)
Translates to: RVPDLEVSDGGLSCPCEASLVEA*PVAGRR
Trigger: CCTTCTTCCTGCCACAGGCCATGCCTCTACCAAGGA...GGCTTCACAAGGGCAGGAGAGCCCTCCATCACTGACTTCCAGATCAGGGACCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp CCTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCACAGCTCCTTGGTAGAGGCATaGCCTGTGGCAGGAAGAAGG +
Preference number: 4 (lower is better)
Translates to: PVPVGTTDQSGLQGKQHSSLVEA*PVAGRR
Trigger: CCTTCTTCCTGCCACAGGCCATGCCTCTACCAAGGA...GCTGTGCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp CAGGGGTCTCAGGGGCCTCTGAACTCAGGCTGGAGACTTCAGAACGATCTCCACTCCTTGGTAGAGGCATaGCCTGTGGCAGGAAGAAGG +
Preference number: 4 (lower is better)
Translates to: QGSQGPLNSGWRLQNDLHSLVEA*PVAGRR
Trigger: CCTTCTTCCTGCCACAGGCCATGCCTCTACCAAGGA...GTGGAGATCGTTCTGAAGTCTCCAGCCTGAGTTCAGAGGCCCCTGAGACCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp ACCGCCATCAGTCCTAACAGGGAAAGGCCATGTGTCCTTGGTAGAGGCATGGCCGCAGGGTCCCTGATCTaGAAGTCAGTGATGGAGGGC +
Preference number: 4 (lower is better)
Translates to: TAISPNRERPCVLGRGMAAGSLI*KSVMEG
Trigger: GCCCTCCATCACTGACTTCCAGATCAGGGACCCTGC...GGCCATGCCTCTACCAAGGACACATGGCCTTTCCCTGTTAGGACTGATGGCGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp AGGTATAAACCAGCTGAGTCCAGAGCCATGCCCTGGAATCTGACCCTGCCTATTCTCCCCTGCTTGGCTTaGCCCATTCCTGCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: RYKPAESRAMPWNLTLPILPCLA*PIPARA
Trigger: GGCCCTGGCAGGAATGGGCCAAGCCAAGCAGGGGAG...AATAGGCAGGGTCAGATTCCAGGGCATGGCTCTGGACTCAGCTGGTTTATACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp TCAGCTGCCCCTTCATCAGACTGTCCAGGGGGAAAGAGACAATGTTGTTCAAGTAAGATCGGGGCATCTTaGCGGCGAAGGCGGCGGCCC +
Preference number: 4 (lower is better)
Translates to: SAAPSSDCPGGKRQCCSSKIGAS*RRRRRP
Trigger: GGGCCGCCGCCTTCGCCGCCAAGATGCCCCGATCTT...ACTTGAACAACATTGTCTCTTTCCCCCTGGACAGTCTGATGAAGGGGCAGCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp CCTCCCACTGGCCCAGTGAGCCTGGGCCGGGAGCTTCAGCAAGCAGCGCTTCTCAATATGTTAGACAGGTaGGTTATAAGTGGCCCTTGG +
Preference number: 4 (lower is better)
Translates to: PPTGPVSLGRELQQAALLNMLDR*VISGPW
Trigger: CCAAGGGCCACTTATAACCCACCTGTCTAACATATT...GAGAAGCGCTGCTTGCTGAAGCTCCCGGCCCAGGCTCACTGGGCCAGTGGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484418.1
ENST00000635167.1
CDS-3UTR CCA 90 bp GCCAACCAAAGCTCTCCCCTTCAGCAGCAGCTTGAGGCAGTCGGGCTGGTTGTAATGTCAGAGGTGGGGTaGAGGGGAGTAACAGCTGGT +
Preference number: 4 (lower is better)
Translates to: ANQSSPLQQQLEAVGLVVMSEVG*RGVTAG
Trigger: ACCAGCTGTTACTCCCCTCCACCCCACCTCTGACAT...TACAACCAGCCCGACTGCCTCAAGCTGCTGCTGAAGGGGAGAGCTTTGGTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000484418.1
ENST00000635167.1
CDS-3UTR CCA 90 bp GCCAACCAAAGCTCTCCCCTTCAGCAGCAGCTTGAGGCAGTCGGGCTGGTTGTAAGCGCAGGCCCAATCTaGCTCTTTCCTTCTGCCATC +
Preference number: 4 (lower is better)
Translates to: ANQSSPLQQQLEAVGLVVSAGPI*LFPSAI
Trigger: GATGGCAGAAGGAAAGAGCCAGATTGGGCCTGCGCT...TACAACCAGCCCGACTGCCTCAAGCTGCTGCTGAAGGGGAGAGCTTTGGTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR TCA 90 bp CCTTGTGAAGCCCCCAGACTGACGGGGGAAATAGAGTCTCGATCTGATGAGGGACAGCAACCTCGCGGGTaGACACGGCCAAGTTTAGGA +
Preference number: 4 (lower is better)
Translates to: PCEAPRLTGEIESRSDEGQQPRG*TRPSLG
Trigger: TCCTAAACTTGGCCGTGTTCACCCGCGAGGTTGCTG...TCCCTCATCAGATCGAGACTCTATTTCCCCCGTCAGTCTGGGGGCTTCACAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000618240.4
ENST00000634561.2
ENST00000635693.1
CDS-3UTR TCA 90 bp ACCGCCATCAGTCCTAACAGGGAAAGGCCATGTGTCCTTGGTAGAGGCATGGCCATGGAGTGCATGTACTaGGGCCGCCAGCTTCTCGAT +
Preference number: 4 (lower is better)
Translates to: TAISPNRERPCVLGRGMAMECMY*GRQLLD
Trigger: ATCGAGAAGCTGGCGGCCTCAGTACATGCACTCCAT...GGCCATGCCTCTACCAAGGACACATGGCCTTTCCCTGTTAGGACTGATGGCGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000492982.6
ENST00000634561.2
ENST00000634705.1
CDS-3UTR TCA 90 bp AAGCAGCGCTTCTCTTCCTCATCCTCCTCACTGTCAGAGCCAGGCTCTGTGGAACCAGCAGGTCCAAGGTaGGTGACTGCATGCGCGAAA +
Preference number: 4 (lower is better)
Translates to: KQRFSSSSSSLSEPGSVEPAGPR*VTACAK
Trigger: TTTCGCGCATGCAGTCACTCACCTTGGACCTGCTGG...TTCCACAGAGCCTGGCTCTGACAGTGAGGAGGATGAGGAAGAGAAGCGCTGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484418.1
ENST00000635167.1
CDS-3UTR TCA 90 bp TCTCGATCTGATGAGGGACTGAGAGTTCTGCAGCTGAAGCCAGCTCAGGAGCACCCAGCAGGTCCAAGGTaGGTGACTGCATGCGCGAAA +
Preference number: 4 (lower is better)
Translates to: SRSDEGLRVLQLKPAQEHPAGPR*VTACAK
Trigger: TTTCGCGCATGCAGTCACTCACCTTGGACCTGCTGG...GTGCTCCTGAGCTGGCTTCAGCTGCAGAACTCTCAGTCCCTCATCAGATCGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR TCA 90 bp CAGTCCCTACTTGGCAGGGTCCCTGATCTGGAAGTCAGTGATGGAGGGCTCTCCCCTGGTTGGCGACTTTaGCAGCCAAATGCAAGACGA +
Preference number: 4 (lower is better)
Translates to: QSLLGRVPDLEVSDGGLSPGWRL*QPNARR
Trigger: TCGTCTTGCATTTGGCTGTCAAAGTCGCCAACCAGG...GGAGAGCCCTCCATCACTGACTTCCAGATCAGGGACCCTGCCAAGTAGGGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR TCA 90 bp AGGGTCCCTGATCTGGAAGTCAGTGATGGAGGGCTCTCCTGCCCTTGTGAAGCCCCTGGTTGGCGACTTTaGCAGCCAAATGCAAGACGA +
Preference number: 4 (lower is better)
Translates to: RVPDLEVSDGGLSCPCEAPGWRL*QPNARR
Trigger: TCGTCTTGCATTTGGCTGTCAAAGTCGCCAACCAGG...GGCTTCACAAGGGCAGGAGAGCCCTCCATCACTGACTTCCAGATCAGGGACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR TCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGCTCCCACTGGCCCAGTaGGCCTGGGCCGGGAGCTTC +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKLPLAQ*AWAGSF
Trigger: GAAGCTCCCGGCCCAGGCTCACTGGGCCAGTGGGAG...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000465372.5
ENST00000492982.6
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
ENST00000635461.1
CDS-3UTR TCA 90 bp GGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGGTATCTGAAGTGCCTAACCATAGGTCTTGTTGCTaGTGTCCAGCCTCCCACTGG +
Preference number: 4 (lower is better)
Translates to: GPPLQGPCLTRVVSEVPNHRSCC*CPASHW
Trigger: CCAGTGGGAGGCTGGACATCAGCAACAAGACCTATG...GTTAGGCACTTCAGATACCACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR TCA 90 bp GCACCCAGCAACTGGCAAGTTGAGATGTTAGTGGTTGATGATGGCTTAGGTGTATCCTCACTCTCGCCCTaGGGGGTGGCTGCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: APSNWQVEMLVVDDGLGVSSLSP*GVAAPR
Trigger: CCTGGGAGCAGCCACCCCTCAGGGCGAGAGTGAGGA...TACACCTAAGCCATCATCAACCACTAACATCTCAACTTGCCAGTTGCTGGGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR TCA 90 bp AAAGAACCGCCATCAGTCCTAACAGGGAAAGGCCATGTGTCCTTGGTAGAGGCACAGAGGCTGCCTGGCTaGGGGACCATCTTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: KEPPSVLTGKGHVSLVEAQRLPG*GTIFRA
Trigger: AGCCCTGAAGATGGTCCCTCAGCCAGGCAGCCTCTG...TGCCTCTACCAAGGACACATGGCCTTTCCCTGTTAGGACTGATGGCGGTTCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000492982.6
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635461.1
ENST00000635693.1
CDS-3UTR TCA 90 bp ACCGCCATCAGTCCTAACAGGGAAAGGCCATGTGTCCTTGGTAGAGGCATGGCCCTCAAGTCCCAGCTCTaGACATTGGGGCCTAGCATG +
Preference number: 4 (lower is better)
Translates to: TAISPNRERPCVLGRGMALKSQL*TLGPSM
Trigger: CATGCTAGGCCCCAATGTTCAGAGCTGGGACTTGAG...GGCCATGCCTCTACCAAGGACACATGGCCTTTCCCTGTTAGGACTGATGGCGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000492982.6
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635461.1
ENST00000635693.1
CDS-3UTR TCA 90 bp GCTTTCCACCAAAGGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGGTATCCTCAAGTCCCAGCTCTaGACATTGGGGCCTAGCATG +
Preference number: 4 (lower is better)
Translates to: AFHQRTTPAGPLSYSCGILKSQL*TLGPSM
Trigger: CATGCTAGGCCCCAATGTTCAGAGCTGGGACTTGAG...GATACCACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR TCA 90 bp CAGCTGTGTTGGCCATTGGTGCTCTCTAGTCTCCCCTGCTTGGCTTGGCCCATTCTCAAGTCCCAGCTCTaGACATTGGGGCCTAGCATG +
Preference number: 4 (lower is better)
Translates to: QLCWPLVLSSLPCLAWPILKSQL*TLGPSM
Trigger: CATGCTAGGCCCCAATGTTCAGAGCTGGGACTTGAG...AATGGGCCAAGCCAAGCAGGGGAGACTAGAGAGCACCAATGGCCAACACAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR TCA 90 bp GATAGGAAAGAACCGCCATCAGTCCTAACAGGGAAAGGCCATGTGTCCTTGGTAGCTCTCCTGCCCTTGTaGAGCCCCCAGACTGACGGG +
Preference number: 4 (lower is better)
Translates to: DRKEPPSVLTGKGHVSLVALLPL*SPQTDG
Trigger: CCCGTCAGTCTGGGGGCTTCACAAGGGCAGGAGAGC...TACCAAGGACACATGGCCTTTCCCTGTTAGGACTGATGGCGGTTCTTTCCTATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR GCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGTCGGCGACGCTGAACTaGTCCGGCATGGCGGGCGCG +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKSATLN*SGMAGA
Trigger: CGCGCCCGCCATGCCGGAGCAGTTCAGCGTCGCCGA...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000492982.6
ENST00000618240.4
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
ENST00000635693.1
CDS-3UTR GCA 90 bp CCAGCTTTCCACCAAAGGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGGTGCCGGAGCTATGGATTaGCCGCACAGCCTTCTTTAT +
Preference number: 4 (lower is better)
Translates to: PAFHQRTTPAGPLSYSCGAGAMD*PHSLLY
Trigger: ATAAAGAAGGCTGTGCGGGCAATCCATAGCTCCGGC...ACCACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000618240.4
ENST00000634561.2
ENST00000635693.1
CDS-3UTR GCA 90 bp CTGAAAGTGGTACGTCCGGTTGTGGGTCACCAGGTCGAAGCACTTTTTCTCCTCCGACCGTCCCTCAGCTaGCCCTTCATCAGACTGTCC +
Preference number: 4 (lower is better)
Translates to: LKVVRPVVGHQVEALFLLRPSLS*PFIRLS
Trigger: GGACAGTCTGATGAAGGGGCAGCTGAGGGACGGTCG...GAGGAGAAAAAGTGCTTCGACCTGGTGACCCACAACCGGACGTACCACTTTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR GCA 90 bp GCTAGTCTTGCAAAAGTTGCACAGAACTTGCTGGGAGACTCCCAGTCCTTGAGCATGCGCCGCTCTCTCTaGATGTCCTGGGCCACCTCC +
Preference number: 4 (lower is better)
Translates to: ASLAKVAQNLLGDSQSLSMRRSL*MSWATS
Trigger: GGAGGTGGCCCAGGACATGCAGAGAGAGCGGCGCAT...GCTCAAGGACTGGGAGTCTCCCAGCAAGTTCTGTGCAACTTTTGCAAGACTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR GCA 90 bp CCCGCAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCACCTCCGCGATGAGTCTTGGAAAAAGTTGTaGTGGGCGTGGAAGAACTTG +
Preference number: 4 (lower is better)
Translates to: PAVAALAIPRPALHLRDESWKKL*WAWKNL
Trigger: CAAGTTCTTCCACGCCCAGCACAACTTTTTCCAAGA...CTCATCGCGGAGGTGAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR GCA 90 bp GAGTCTCGATCTGATGAGGGACTGAGAGTTCTGCAGCTGAAGCCAGCTCAGGAGTCTCTGCTCTCAAGCTaGAGTGTCCCTCGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: ESRSDEGLRVLQLKPAQESLLSS*SVPRRE
Trigger: CTCCCTCCGAGGGACACTGCAGCTTGAGAGCAGAGA...CTCCTGAGCTGGCTTCAGCTGCAGAACTCTCAGTCCCTCATCAGATCGAGACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR GCA 90 bp CTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCACAGCCTCAGGTGTTCCTCTCTaGTCTCAAGCTGCAGTGTCC +
Preference number: 4 (lower is better)
Translates to: LFLWEPQTSQVSRGNSTASGVPL*SQAAVS
Trigger: GGACACTGCAGCTTGAGAGCAGAGAGGAACACCTGA...GGCTGTGCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR GCA 90 bp CGCCTCACACTCGTGCTCGTCCTCTGCCTGAAAGTGGTACGTCCGGTTGTGGGTCTTGGTGCTGGTGGATaGTATAGCCACATCCTGAGT +
Preference number: 4 (lower is better)
Translates to: RLTLVLVLCLKVVRPVVGLGAGG*YSHILS
Trigger: ACTCAGGATGTGGCTATAGCATCCACCAGCACCAAG...ACCCACAACCGGACGTACCACTTTCAGGCAGAGGACGAGCACGAGTGTGAGGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR GCA 90 bp AGGGTCCCTGATCTGGAAGTCAGTGATGGAGGGCTCTCCTGCCCTTGTGAAGCCTTCTCCGTCCCAAACTaGTTGTTGCCTTGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: RVPDLEVSDGGLSCPCEAFSVPN*LLPWCW
Trigger: CCAGCACCAAGGCAACAAGCAGTTTGGGACGGAGAA...GGCTTCACAAGGGCAGGAGAGCCCTCCATCACTGACTTCCAGATCAGGGACCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR GCA 90 bp CCACGGCCTCTCGGTACTGCTCTTCATTCTCCACATGGCCAAGGCCGGAGCTATTTCTCCGTCCCAAACTaGTTGTTGCCTTGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: PRPLGTALHSPHGQGRSYFSVPN*LLPWCW
Trigger: CCAGCACCAAGGCAACAAGCAGTTTGGGACGGAGAA...ATAGCTCCGGCCTTGGCCATGTGGAGAATGAAGAGCAGTACCGAGAGGCCGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR GCA 90 bp CAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCACCTCCGCGATGAGCAGCCCACACTTCCTTTTCTaGCAGACTCTTCGAATTCCG +
Preference number: 4 (lower is better)
Translates to: QSQHWLFPGLLFTSAMSSPHFLF*QTLRIP
Trigger: CGGAATTCGAAGAGTCTGGCAGAAAAGGAAGTGTGG...GCTGCTCATCGCGGAGGTGAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR GCA 90 bp GTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCACCTCCGCGATGAGCAGCTTTCAGGGCTTCGTCCTTaGTGTTCTGCAACACTGACA +
Preference number: 4 (lower is better)
Translates to: VAALAIPRPALHLRDEQLSGLRP*CSATLT
Trigger: TGTCAGTGTTGCAGAACAGCAAGGACGAAGCCCTGA...AAGCTGCTCATCGCGGAGGTGAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR GCA 90 bp GGCCCTTGTCTTACTCGTGTGGTATCTGAAGTGCCTAACACAGGTCCAGACATACCCCGAGGAAGGCGCTaGTCAGGGCTTCGTCCTTGC +
Preference number: 4 (lower is better)
Translates to: GPCLTRVVSEVPNTGPDIPRGRR*SGLRPC
Trigger: GCAAGGACGAAGCCCTGAGCAGCGCCTTCCTCGGGG...TATGTCTGGACCTGTGTTAGGCACTTCAGATACCACACGAGTAAGACAAGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR GCA 90 bp GCACCCAGCAACTGGCAAGTTGAGATGTTAGTGGTTGATGATGGCTTAGGTGTAGAGCCACGTGGGGTCTaGAGCCCCGCAGTCGCAGCA +
Preference number: 4 (lower is better)
Translates to: APSNWQVEMLVVDDGLGVEPRGV*SPAVAA
Trigger: TGCTGCGACTGCGGGGCTGCAGACCCCACGTGGCTC...TACACCTAAGCCATCATCAACCACTAACATCTCAACTTGCCAGTTGCTGGGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR GCA 90 bp CCTTGTGAAGCCCCCAGACTGACGGGGGAAATAGAGTCTCGATCTGATGAGGGATGTAGTCCCTGCGGGTaGCCATGTCACTCTCAGCTG +
Preference number: 4 (lower is better)
Translates to: PCEAPRLTGEIESRSDEGCSPCG*PCHSQL
Trigger: CAGCTGAGAGTGACATGGGCACCCGCAGGGACTACA...TCCCTCATCAGATCGAGACTCTATTTCCCCCGTCAGTCTGGGGGCTTCACAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR GCA 90 bp CAGAGCCGTGTTCCCGTCAGCAGCCTTGGCATCCAGGTGACCACCGTTCTGGATCGGCGTGCAAACCTATaGTCCACATACTTGGCCATA +
Preference number: 4 (lower is better)
Translates to: QSRVPVSSLGIQVTTVLDRRANL*STYLAI
Trigger: TATGGCCAAGTATGTGGAGCATAGGTTTGCACGCCG...ATCCAGAACGGTGGTCACCTGGATGCCAAGGCTGCTGACGGGAACACGGCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
CDS-3UTR GCA 90 bp AGGGCTCCCAGGCCCCTAGCGGGTAATGAGATAGGAAAGAACCGCCATCAGTCCAGGTGTGCACCGGCGTaGAAACCTATGCTCCACATA +
Preference number: 4 (lower is better)
Translates to: RAPRPLAGNEIGKNRHQSRCAPA*KPMLHI
Trigger: TATGTGGAGCATAGGTTTGCACGCCGGTGCACACCT...GGACTGATGGCGGTTCTTTCCTATCTCATTACCCGCTAGGGGCCTGGGAGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR GCA 90 bp CTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCACAGCCAGGTGTGCACCGGCGTaGAAACCTATGCTCCACATA +
Preference number: 4 (lower is better)
Translates to: LFLWEPQTSQVSRGNSTARCAPA*KPMLHI
Trigger: TATGTGGAGCATAGGTTTGCACGCCGGTGCACACCT...GGCTGTGCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR GCA 90 bp GAGGGACTGAGAGTTCTGCAGCTGAAGCCAGCTCAGGAGCACTCAGATCCAGCCACAGGAGGTCCCTGTTaGAAATGGCTGTCCAGAGTC +
Preference number: 4 (lower is better)
Translates to: EGLRVLQLKPAQEHSDPATGGPC*KWLSRV
Trigger: GACTCTGGACAGCCATTTGCAACAGGGACCTCCTGT...GGCTGGATCTGAGTGCTCCTGAGCTGGCTTCAGCTGCAGAACTCTCAGTCCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR GCA 90 bp GCCTATTCCCAAGCCCAACCCTTAAGACCAGCTTTCCACCAAAGGACCACCCCTGGCTGTCCAAAGTCCTaGCCATTGGCAAAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: AYSQAQPLRPAFHQRTTPGCPKS*PLAKAS
Trigger: GGAGGCCTTTGCCAATGGGCAGGACTTTGGACAGCC...AGGGGTGGTCCTTTGGTGGAAAGCTGGTCTTAAGGGTTGGGCTTGGGAATAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR GCA 90 bp CCTGCCTATTCCCAAGCCCAACCCTTAAGACCAGCTTTCCACCAAAGGACCACCGACGAGTTCTTCAGGTaGCTGTGCATCAGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: PAYSQAQPLRPAFHQRTTDEFFR*LCIRPW
Trigger: CCAGGGCCTGATGCACAGGCACCTGAAGAACTCGTC...GGTGGTCCTTTGGTGGAAAGCTGGTCTTAAGGGTTGGGCTTGGGAATAGGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR GCA 90 bp TGCCCTTGTGAAGCCCCCAGACTGACGGGGGAAATAGAGTCTCGATCTGATGAGGACGAGTTCTTCAGGTaGCTGTGCATCAGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: CPCEAPRLTGEIESRSDEDEFFR*LCIRPW
Trigger: CCAGGGCCTGATGCACAGGCACCTGAAGAACTCGTC...CTCATCAGATCGAGACTCTATTTCCCCCGTCAGTCTGGGGGCTTCACAAGGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR GCA 90 bp CAGGGGTCTCAGGGGCCTCTGAACTCAGGCTGGAGACTTCAGAACGATCTCCACCTGGTTGTAGAGTGCTaGGTAGTGCAGAGCCGTGTT +
Preference number: 4 (lower is better)
Translates to: QGSQGPLNSGWRLQNDLHLVVEC*VVQSRV
Trigger: AACACGGCTCTGCACTACGCAGCACTCTACAACCAG...GTGGAGATCGTTCTGAAGTCTCCAGCCTGAGTTCAGAGGCCCCTGAGACCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR GCA 90 bp CAGAGCCGTGTTCCCGTCAGCAGCCTTGGCATCCAGGTGACCACCGTTCTGGATTCACACTCCTTGTGGTaGTTCTTCCTGGCTATGTCC +
Preference number: 4 (lower is better)
Translates to: QSRVPVSSLGIQVTTVLDSHSLW*FFLAMS
Trigger: GGACATAGCCAGGAAGAAGCACCACAAGGAGTGTGA...ATCCAGAACGGTGGTCACCTGGATGCCAAGGCTGCTGACGGGAACACGGCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
CDS-3UTR GCA 90 bp GCACCCAGCAACTGGCAAGTTGAGATGTTAGTGGTTGATGATGGCTTAGGTGTAGCCCTGAGGGGTGGCTaGTCCCAGGCTGGCGACAGT +
Preference number: 4 (lower is better)
Translates to: APSNWQVEMLVVDDGLGVALRGG*SQAGDS
Trigger: ACTGTCGCCAGCCTGGGAGCAGCCACCCCTCAGGGC...TACACCTAAGCCATCATCAACCACTAACATCTCAACTTGCCAGTTGCTGGGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR GCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGGGCTGGGTCTGGAGGTaGCTGGGGGCTCTCGGAGGC +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKGWVWR*LGALGG
Trigger: GCCTCCGAGAGCCCCCAGGCACCTCCAGACCCAGCC...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000465372.5
ENST00000492982.6
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
ENST00000635461.1
ENST00000635693.1
CDS-3UTR GCA 90 bp CAAGCCCAACCCTTAAGACCAGCTTTCCACCAAAGGACCACCCCTGCAGGGCCCAAGTTGCACAGAACTTaGTGGGAGACTCCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: QAQPLRPAFHQRTTPAGPKLHRT*WETPSP
Trigger: AGGACTGGGAGTCTCCCAGCAAGTTCTGTGCAACTT...GGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGCTGGTCTTAAGGGTTGGGCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR GCA 90 bp TGCCCTTGTGAAGCCCCCAGACTGACGGGGGAAATAGAGTCTCGATCTGATGAGCCAAAGGACCACCCCTaGAGGGCCCTTGTCTTACTC +
Preference number: 4 (lower is better)
Translates to: CPCEAPRLTGEIESRSDEPKDHP*RALVLL
Trigger: GAGTAAGACAAGGGCCCTGCAGGGGTGGTCCTTTGG...CTCATCAGATCGAGACTCTATTTCCCCCGTCAGTCTGGGGGCTTCACAAGGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR GCA 90 bp GCCTATTCCCAAGCCCAACCCTTAAGACCAGCTTTCCACCAAAGGACCACCCCTCCAAAGGACCACCCCTaGAGGGCCCTTGTCTTACTC +
Preference number: 4 (lower is better)
Translates to: AYSQAQPLRPAFHQRTTPPKDHP*RALVLL
Trigger: GAGTAAGACAAGGGCCCTGCAGGGGTGGTCCTTTGG...AGGGGTGGTCCTTTGGTGGAAAGCTGGTCTTAAGGGTTGGGCTTGGGAATAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR GCA 90 bp GCTTTCCACCAAAGGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGGTATCCTCTCTAGTCTCCCCTaGTTGGCTTGGCCCATTCCT +
Preference number: 4 (lower is better)
Translates to: AFHQRTTPAGPLSYSCGILSSLP*LAWPIP
Trigger: AGGAATGGGCCAAGCCAAGCAGGGGAGACTAGAGAG...GATACCACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR GCA 90 bp ACCCTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCACACTCTCTAGTCTCCCCTaGTTGGCTTGGCCCATTCCT +
Preference number: 4 (lower is better)
Translates to: TLFLWEPQTSQVSRGNSTLSSLP*LAWPIP
Trigger: AGGAATGGGCCAAGCCAAGCAGGGGAGACTAGAGAG...TGTGCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR GCA 90 bp CCAGCTTTCCACCAAAGGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGGTTGTGTTGGCCATTGGTaGTCTCTAGTCTCCCCTGCT +
Preference number: 4 (lower is better)
Translates to: PAFHQRTTPAGPLSYSCGCVGHW*SLVSPA
Trigger: AGCAGGGGAGACTAGAGAGCACCAATGGCCAACACA...ACCACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR GCA 90 bp GACCAGCTTTCCACCAAAGGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGTGTGTTGGCCATTGGTaGTCTCTAGTCTCCCCTGCT +
Preference number: 4 (lower is better)
Translates to: DQLSTKGPPLQGPCLTRVCVGHW*SLVSPA
Trigger: AGCAGGGGAGACTAGAGAGCACCAATGGCCAACACA...CACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGCTGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp TCTTTCCTTCTGCCATCCAGAGGCCTGAGGGACAGGGCTGGGACCCACCTTCTCAAGTTGTGCTGGGCGTaGAAGAACTTGATGAGGCTC +
Preference number: 4 (lower is better)
Translates to: SFLLPSRGLRDRAGTHLLKLCWA*KNLMRL
Trigger: GAGCCTCATCAAGTTCTTCCACGCCCAGCACAACTT...GAGAAGGTGGGTCCCAGCCCTGTCCCTCAGGCCTCTGGATGGCAGAAGGAAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp CCCGCAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCACCTCCGCGATGAGTGGAAAAAGTTGTGCTaGGCGTGGAAGAACTTGATG +
Preference number: 4 (lower is better)
Translates to: PAVAALAIPRPALHLRDEWKKLC*AWKNLM
Trigger: CATCAAGTTCTTCCACGCCCAGCACAACTTTTTCCA...CTCATCGCGGAGGTGAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR CCA 90 bp GCCTATTCCCAAGCCCAACCCTTAAGACCAGCTTTCCACCAAAGGACCACCCCTTGGTACGTCCGGTTGTaGGTCACCAGGTCGAAGCAC +
Preference number: 4 (lower is better)
Translates to: AYSQAQPLRPAFHQRTTPWYVRL*VTRSKH
Trigger: GTGCTTCGACCTGGTGACCCACAACCGGACGTACCA...AGGGGTGGTCCTTTGGTGGAAAGCTGGTCTTAAGGGTTGGGCTTGGGAATAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR CCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGTGCGGCTCCCCATCATaGCCGGCGGACCCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKCGSPS*PADPQD
Trigger: GTCCTGGGGGTCCGCCGGCCATGATGGGGAGCCGCA...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000492982.6
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
CDS-3UTR CCA 90 bp GGCCCTTGTCTTACTCGTGTGGTATCTGAAGTGCCTAACACAGGTCCAGACATATGGACGCCCGAGCACTaGATGCAGGTGAGCACGCCC +
Preference number: 4 (lower is better)
Translates to: GPCLTRVVSEVPNTGPDIWTPEH*MQVSTP
Trigger: GGGCGTGCTCACCTGCATCCAGTGCTCGGGCGTCCA...TATGTCTGGACCTGTGTTAGGCACTTCAGATACCACACGAGTAAGACAAGGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR CCA 90 bp GAGTCTCGATCTGATGAGGGACTGAGAGTTCTGCAGCTGAAGCCAGCTCAGGAGCCGTGTGAGGGTAGCTaGGCCTCCATGACCTCATTG +
Preference number: 4 (lower is better)
Translates to: ESRSDEGLRVLQLKPAQEPCEGS*ASMTSL
Trigger: CAATGAGGTCATGGAGGCCCAGCTACCCTCACACGG...CTCCTGAGCTGGCTTCAGCTGCAGAACTCTCAGTCCCTCATCAGATCGAGACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CCA 90 bp ACCCTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCACACAAAGTCCTGCCCATTaGCAAAGGCCTCCAGTACCG +
Preference number: 4 (lower is better)
Translates to: TLFLWEPQTSQVSRGNSTQSPAH*QRPPVP
Trigger: CGGTACTGGAGGCCTTTGCCAATGGGCAGGACTTTG...TGTGCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CCA 90 bp CCACCGTTCTGGATGATGAAATCCACCAGAGGCAGGGAAGCCTGGTTGGCGACTCAAAGTCCTGCCCATTaGCAAAGGCCTCCAGTACCG +
Preference number: 4 (lower is better)
Translates to: PPFWMMKSTRGREAWLATQSPAH*QRPPVP
Trigger: CGGTACTGGAGGCCTTTGCCAATGGGCAGGACTTTG...AGTCGCCAACCAGGCTTCCCTGCCTCTGGTGGATTTCATCATCCAGAACGGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
CDS-3UTR CCA 90 bp ATGAAATCCACCAGAGGCAGGGAAGCCTGGTTGGCGACTTTGACAGCCAAATGCCTGTGCATCAGGCCCTaGCAGCGGCTGTCCAAAGTC +
Preference number: 4 (lower is better)
Translates to: MKSTRGREAWLATLTAKCLCIRP*QRLSKV
Trigger: GACTTTGGACAGCCGCTGCCAGGGCCTGATGCACAG...GCATTTGGCTGTCAAAGTCGCCAACCAGGCTTCCCTGCCTCTGGTGGATTTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
CDS-3UTR CCA 90 bp CTCATCCTCCTCACTGTCAGAGCCAGGCTCTGTGGAAATTACCCAGGAGTAGTCCTGTGCATCAGGCCCTaGCAGCGGCTGTCCAAAGTC +
Preference number: 4 (lower is better)
Translates to: LILLTVRARLCGNYPGVVLCIRP*QRLSKV
Trigger: GACTTTGGACAGCCGCTGCCAGGGCCTGATGCACAG...GACTACTCCTGGGTAATTTCCACAGAGCCTGGCTCTGACAGTGAGGAGGATGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
CDS-3UTR CCA 90 bp GCCTATTCCCAAGCCCAACCCTTAAGACCAGCTTTCCACCAAAGGACCACCCCTAGAGGCAGGGAAGCCTaGTTGGCGACTTTGACAGCC +
Preference number: 4 (lower is better)
Translates to: AYSQAQPLRPAFHQRTTPRGREA*LATLTA
Trigger: GGCTGTCAAAGTCGCCAACCAGGCTTCCCTGCCTCT...AGGGGTGGTCCTTTGGTGGAAAGCTGGTCTTAAGGGTTGGGCTTGGGAATAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CCA 90 bp AAAGTGGTACGTCCGGTTGTGGGTCACCAGGTCGAAGCACTTTTTCTCCTCAGGTCCCGTCAGCAGCCTTaGCATCCAGGTGACCACCGT +
Preference number: 4 (lower is better)
Translates to: KVVRPVVGHQVEALFLLRSRQQP*HPGDHR
Trigger: ACGGTGGTCACCTGGATGCCAAGGCTGCTGACGGGA...CCTGAGGAGAAAAAGTGCTTCGACCTGGTGACCCACAACCGGACGTACCACTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp GGCAGGGAAGCCTGGTTGGCGACTTTGACAGCCAAATGCAAGACGAGTTCTTCATCCCGTCAGCAGCCTTaGCATCCAGGTGACCACCGT +
Preference number: 4 (lower is better)
Translates to: GREAWLATLTAKCKTSSSSRQQP*HPGDHR
Trigger: ACGGTGGTCACCTGGATGCCAAGGCTGCTGACGGGA...TGAAGAACTCGTCTTGCATTTGGCTGTCAAAGTCGCCAACCAGGCTTCCCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
CDS-3UTR CCA 90 bp GTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCACCTCCGCGATGAGCAGCTTTGTGGTGCTTCTTCCTaGCTATGTCCAGAGCTGTCT +
Preference number: 4 (lower is better)
Translates to: VAALAIPRPALHLRDEQLCGASS*LCPELS
Trigger: AGACAGCTCTGGACATAGCCAGGAAGAAGCACCACA...AAGCTGCTCATCGCGGAGGTGAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp TCCAGCCACAGGGCTCCCAGGCCCCTAGCGGGTAATGAGATAGGAAAGAACCGCCAGAGCCAGGCTCTGTaGAAATTACCCAGGAGTAGT +
Preference number: 4 (lower is better)
Translates to: SSHRAPRPLAGNEIGKNRQSQAL*KLPRSS
Trigger: ACTACTCCTGGGTAATTTCCACAGAGCCTGGCTCTG...GCGGTTCTTTCCTATCTCATTACCCGCTAGGGGCCTGGGAGCCCTGTGGCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
ENST00000635461.1
CDS-3UTR CCA 90 bp CAAGCCCAACCCTTAAGACCAGCTTTCCACCAAAGGACCACCCCTGCAGGGCCCCAGAGCCAGGCTCTGTaGAAATTACCCAGGAGTAGT +
Preference number: 4 (lower is better)
Translates to: QAQPLRPAFHQRTTPAGPQSQAL*KLPRSS
Trigger: ACTACTCCTGGGTAATTTCCACAGAGCCTGGCTCTG...GGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGCTGGTCTTAAGGGTTGGGCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CCA 90 bp CCTTGTGAAGCCCCCAGACTGACGGGGGAAATAGAGTCTCGATCTGATGAGGGATGGCTGCTCCCAGGCTaGCGACAGTCTCATAGGTCT +
Preference number: 4 (lower is better)
Translates to: PCEAPRLTGEIESRSDEGWLLPG*RQSHRS
Trigger: AGACCTATGAGACTGTCGCCAGCCTGGGAGCAGCCA...TCCCTCATCAGATCGAGACTCTATTTCCCCCGTCAGTCTGGGGGCTTCACAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CCA 90 bp CCTGCCTATTCCCAAGCCCAACCCTTAAGACCAGCTTTCCACCAAAGGACCACCTGGCTGCTCCCAGGCTaGCGACAGTCTCATAGGTCT +
Preference number: 4 (lower is better)
Translates to: PAYSQAQPLRPAFHQRTTWLLPG*RQSHRS
Trigger: AGACCTATGAGACTGTCGCCAGCCTGGGAGCAGCCA...GGTGGTCCTTTGGTGGAAAGCTGGTCTTAAGGGTTGGGCTTGGGAATAGGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CCA 90 bp CTTGGCAGGGTCCCTGATCTGGAAGTCAGTGATGGAGGGCTCTCCTGCCCTTGTAGAAGAGTTTTTGACTaGCAAGGGCGGGGGACAGTC +
Preference number: 4 (lower is better)
Translates to: LGRVPDLEVSDGGLSCPCRRVFD*QGRGTV
Trigger: GACTGTCCCCCGCCCTTGCCAGTCAAAAACTCTTCT...ACAAGGGCAGGAGAGCCCTCCATCACTGACTTCCAGATCAGGGACCCTGCCAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGGGGTCTGGAGGTGCCTaGGGGCTCTCGGAGGCCCTC +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKGSGGA*GLSEAL
Trigger: GAGGGCCTCCGAGAGCCCCCAGGCACCTCCAGACCC...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 12 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000465372.5
ENST00000492982.6
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
ENST00000635461.1
ENST00000635693.1
CDS-3UTR CCA 90 bp GATAGGAAAGAACCGCCATCAGTCCTAACAGGGAAAGGCCATGTGTCCTTGGTACCGGCACGTTCCTTCTaGGCAGAGGCTGCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: DRKEPPSVLTGKGHVSLVPARSF*AEAAWL
Trigger: CAGCCAGGCAGCCTCTGCCCAGAAGGAACGTGCCGG...TACCAAGGACACATGGCCTTTCCCTGTTAGGACTGATGGCGGTTCTTTCCTATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000492982.6
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635461.1
ENST00000635693.1
CDS-3UTR CCA 90 bp GGCCCTTGTCTTACTCGTGTGGTATCTGAAGTGCCTAACACAGGTCCAGACATACCGGCACGTTCCTTCTaGGCAGAGGCTGCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: GPCLTRVVSEVPNTGPDIPARSF*AEAAWL
Trigger: CAGCCAGGCAGCCTCTGCCCAGAAGGAACGTGCCGG...TATGTCTGGACCTGTGTTAGGCACTTCAGATACCACACGAGTAAGACAAGGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp GCCTATTCCCAAGCCCAACCCTTAAGACCAGCTTTCCACCAAAGGACCACCCCTCCCAGCTCTGAACATTaGGGCCTAGCATGGGGCATG +
Preference number: 4 (lower is better)
Translates to: AYSQAQPLRPAFHQRTTPPSSEH*GLAWGM
Trigger: CATGCCCCATGCTAGGCCCCAATGTTCAGAGCTGGG...AGGGGTGGTCCTTTGGTGGAAAGCTGGTCTTAAGGGTTGGGCTTGGGAATAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp ACCGCCATCAGTCCTAACAGGGAAAGGCCATGTGTCCTTGGTAGAGGCATGGCCTCCTTGGTAGAGGCATaGCCTGTGGCAGGAAGAAGG +
Preference number: 4 (lower is better)
Translates to: TAISPNRERPCVLGRGMASLVEA*PVAGRR
Trigger: CCTTCTTCCTGCCACAGGCCATGCCTCTACCAAGGA...GGCCATGCCTCTACCAAGGACACATGGCCTTTCCCTGTTAGGACTGATGGCGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000492982.6
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635461.1
ENST00000635693.1
CDS-3UTR CCA 90 bp TCTCGATCTGATGAGGGACTGAGAGTTCTGCAGCTGAAGCCAGCTCAGGAGCACGCAGGGTCCCTGATCTaGAAGTCAGTGATGGAGGGC +
Preference number: 4 (lower is better)
Translates to: SRSDEGLRVLQLKPAQEHAGSLI*KSVMEG
Trigger: GCCCTCCATCACTGACTTCCAGATCAGGGACCCTGC...GTGCTCCTGAGCTGGCTTCAGCTGCAGAACTCTCAGTCCCTCATCAGATCGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp CAGTCCCTACTTGGCAGGGTCCCTGATCTGGAAGTCAGTGATGGAGGGCTCTCCTCCAGAGCCATGCCCTaGAATCTGACCCTGCCTATT +
Preference number: 4 (lower is better)
Translates to: QSLLGRVPDLEVSDGGLSSRAMP*NLTLPI
Trigger: AATAGGCAGGGTCAGATTCCAGGGCATGGCTCTGGA...GGAGAGCCCTCCATCACTGACTTCCAGATCAGGGACCCTGCCAAGTAGGGACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp GATAGGAAAGAACCGCCATCAGTCCTAACAGGGAAAGGCCATGTGTCCTTGGTACTCCCCTGCTTGGCTTaGCCCATTCCTGCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: DRKEPPSVLTGKGHVSLVLPCLA*PIPARA
Trigger: GGCCCTGGCAGGAATGGGCCAAGCCAAGCAGGGGAG...TACCAAGGACACATGGCCTTTCCCTGTTAGGACTGATGGCGGTTCTTTCCTATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp TCTCGATCTGATGAGGGACTGAGAGTTCTGCAGCTGAAGCCAGCTCAGGAGCACCTAGTCTCCCCTGCTTaGCTTGGCCCATTCCTGCCA +
Preference number: 4 (lower is better)
Translates to: SRSDEGLRVLQLKPAQEHLVSPA*LGPFLP
Trigger: TGGCAGGAATGGGCCAAGCCAAGCAGGGGAGACTAG...GTGCTCCTGAGCTGGCTTCAGCTGCAGAACTCTCAGTCCCTCATCAGATCGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp GACCAGCTTTCCACCAAAGGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGAGCTGTGTTGGCCATTaGTGCTCTCTAGTCTCCCCT +
Preference number: 4 (lower is better)
Translates to: DQLSTKGPPLQGPCLTRVSCVGH*CSLVSP
Trigger: AGGGGAGACTAGAGAGCACCAATGGCCAACACAGCT...CACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGCTGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp CTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCACAGCCAGCTGTGTTGGCCATTaGTGCTCTCTAGTCTCCCCT +
Preference number: 4 (lower is better)
Translates to: LFLWEPQTSQVSRGNSTASCVGH*CSLVSP
Trigger: AGGGGAGACTAGAGAGCACCAATGGCCAACACAGCT...GGCTGTGCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp ACCGCCATCAGTCCTAACAGGGAAAGGCCATGTGTCCTTGGTAGAGGCATGGCCGCCAGGCAGCTGTGTTaGCCATTGGTGCTCTCTAGT +
Preference number: 4 (lower is better)
Translates to: TAISPNRERPCVLGRGMAARQLC*PLVLSS
Trigger: ACTAGAGAGCACCAATGGCCAACACAGCTGCCTGGC...GGCCATGCCTCTACCAAGGACACATGGCCTTTCCCTGTTAGGACTGATGGCGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp CCTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCACAGCACAACCCTGTTCCTGTaGGAACCACAGACCAGTCAG +
Preference number: 4 (lower is better)
Translates to: PVPVGTTDQSGLQGKQHSTTLFL*EPQTSQ
Trigger: CTGACTGGTCTGTGGTTCCCACAGGAACAGGGTTGT...GCTGTGCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp GGCATCCAGGTGACCACCGTTCTGGATGATGAAATCCACCAGAGGCAGGGAAGCCTCTGCAGGATGGCTTaGTCTCCTTCCAAGATCGGG +
Preference number: 4 (lower is better)
Translates to: GIQVTTVLDDEIHQRQGSLCRMA*SPSKIG
Trigger: CCCGATCTTGGAAGGAGACCAAGCCATCCTGCAGAG...GCTTCCCTGCCTCTGGTGGATTTCATCATCCAGAACGGTGGTCACCTGGATGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp GCCAACCAAAGCTCTCCCCTTCAGCAGCAGCTTGAGGCAGTCGGGCTGGTTGTAGTTATAAGTGGCCCTTaGAGGGGTTCTCACCTGTGC +
Preference number: 4 (lower is better)
Translates to: ANQSSPLQQQLEAVGLVVVISGP*RGSHLC
Trigger: GCACAGGTGAGAACCCCTCCAAGGGCCACTTATAAC...TACAACCAGCCCGACTGCCTCAAGCTGCTGCTGAAGGGGAGAGCTTTGGTTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484418.1
ENST00000635167.1
CDS-3UTR CCA 90 bp GGCAGGGAAGCCTGGTTGGCGACTTTGACAGCCAAATGCAAGACGAGTTCTTCACCTGAGGGACAGGGCTaGGACCCACCTTCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: GREAWLATLTAKCKTSSSPEGQG*DPPSLP
Trigger: AGGAAGAGAAGGTGGGTCCCAGCCCTGTCCCTCAGG...TGAAGAACTCGTCTTGCATTTGGCTGTCAAAGTCGCCAACCAGGCTTCCCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR TCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGGGAACTCGGCGACGCTaGACTGCTCCGGCATGGCGG +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKGTRRR*TAPAWR
Trigger: CCGCCATGCCGGAGCAGTTCAGCGTCGCCGAGTTCC...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000492982.6
ENST00000618240.4
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
ENST00000635693.1
CDS-3UTR TCA 90 bp GGCAGGGAAGCCTGGTTGGCGACTTTGACAGCCAAATGCAAGACGAGTTCTTCACAGCAACCTCGCGGGTaGACACGGCCAAGTTTAGGA +
Preference number: 4 (lower is better)
Translates to: GREAWLATLTAKCKTSSSQQPRG*TRPSLG
Trigger: TCCTAAACTTGGCCGTGTTCACCCGCGAGGTTGCTG...TGAAGAACTCGTCTTGCATTTGGCTGTCAAAGTCGCCAACCAGGCTTCCCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR TCA 90 bp CACCAGAGGCAGGGAAGCCTGGTTGGCGACTTTGACAGCCAAATGCAAGACGAGTCTGAATCAGGTTCTTaGAGAGCGCAGCAACCTCGC +
Preference number: 4 (lower is better)
Translates to: HQRQGSLVGDFDSQMQDESESGS*RAQQPR
Trigger: GCGAGGTTGCTGCGCTCTTCAAGAACCTGATTCAGA...CTCGTCTTGCATTTGGCTGTCAAAGTCGCCAACCAGGCTTCCCTGCCTCTGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR TCA 90 bp CTCCCAGTCCTTGAGCCATCTCCTTCAGTGATGCCAACCGGCACGTTCCTTCTGTCTGAATCAGGTTCTTaGAGAGCGCAGCAACCTCGC +
Preference number: 4 (lower is better)
Translates to: LPVLEPSPSVMPTGTFLLSESGS*RAQQPR
Trigger: GCGAGGTTGCTGCGCTCTTCAAGAACCTGATTCAGA...CAGAAGGAACGTGCCGGTTGGCATCACTGAAGGAGATGGCTCAAGGACTGGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000492982.6
ENST00000618240.4
ENST00000634705.1
ENST00000635693.1
CDS-3UTR TCA 90 bp GCCTATTCCCAAGCCCAACCCTTAAGACCAGCTTTCCACCAAAGGACCACCCCTATGGAGTGCATGTACTaGGGCCGCCAGCTTCTCGAT +
Preference number: 4 (lower is better)
Translates to: AYSQAQPLRPAFHQRTTPMECMY*GRQLLD
Trigger: ATCGAGAAGCTGGCGGCCTCAGTACATGCACTCCAT...AGGGGTGGTCCTTTGGTGGAAAGCTGGTCTTAAGGGTTGGGCTTGGGAATAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR TCA 90 bp TCTTCCTCATCCTCCTCACTGTCAGAGCCAGGCTCTGTGGAAATTACCCAGGAGTCGTCCTCCTGGGCCTaGTGGAGTGCATGTACTGAG +
Preference number: 4 (lower is better)
Translates to: SSSSSSLSEPGSVEITQESSSWA*WSACTE
Trigger: CTCAGTACATGCACTCCATCAGGCCCAGGAGGACGA...CTCCTGGGTAATTTCCACAGAGCCTGGCTCTGACAGTGAGGAGGATGAGGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR TCA 90 bp AAAGTGGTACGTCCGGTTGTGGGTCACCAGGTCGAAGCACTTTTTCTCCTCAGGTCGTCCTCCTGGGCCTaGTGGAGTGCATGTACTGAG +
Preference number: 4 (lower is better)
Translates to: KVVRPVVGHQVEALFLLRSSSWA*WSACTE
Trigger: CTCAGTACATGCACTCCATCAGGCCCAGGAGGACGA...CCTGAGGAGAAAAAGTGCTTCGACCTGGTGACCCACAACCGGACGTACCACTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR TCA 90 bp CTGAAAGTGGTACGTCCGGTTGTGGGTCACCAGGTCGAAGCACTTTTTCTCCTCTGCTCGTCCTCTGCCTaGAAGTGGTACGTCCGGTTG +
Preference number: 4 (lower is better)
Translates to: LKVVRPVVGHQVEALFLLCSSSA*KWYVRL
Trigger: CAACCGGACGTACCA