RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ASAP2 (Homo sapiens)

Ensembl gene IDs: ENSG00000151693

Ensembl transcript IDs: ENST00000281419.8, ENST00000315273.4, ENST00000471687.1, ENST00000484590.1, ENST00000491413.1, ENST00000641030.1

Found 433 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GTTAATACAGCATGGTCTGCGCCACAGAATTCTACTGTGTACAGTTaGTTTCTGTGTGACTCAGGAAGTTCAAGAAGGCAAATTCCAAAA +
Preference number: 1 (lower is better)
Translates to: VNTAWSAPQNSTVYS*FLCDSGSSRRQIPK
Trigger: TTTTGGAATTTGCCTTCTTGAACTTCCTGAGTCACACAGAAAGCAACTGTACACAGTAGAATTCTGTGGCGCAGACCATGCTGTATTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
3UTR-3UTR CCA 90 bp ACAGCATGGTCTGCGCCACAGAATTCTACTGTGTACAGTTGCTTTCTGTGTGACCACCAACTCCAGAACTaGGCCAAGGAATGCAGGAAG +
Preference number: 2 (lower is better)
Translates to: TAWSAPQNSTVYSCFLCDHQLQN*AKECRK
Trigger: CTTCCTGCATTCCTTGGCCCAGTTCTGGAGTTGGTG...GTCACACAGAAAGCAACTGTACACAGTAGAATTCTGTGGCGCAGACCATGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
3UTR-3UTR CCA 90 bp ACAGCATGGTCTGCGCCACAGAATTCTACTGTGTACAGTTGCTTTCTGTGTGACGAAGCAGCAGTTCACTaGCCGCCTAAAATAATAATT +
Preference number: 2 (lower is better)
Translates to: TAWSAPQNSTVYSCFLCDEAAVH*PPKIII
Trigger: AATTATTATTTTAGGCGGCCAGTGAACTGCTGCTTC...GTCACACAGAAAGCAACTGTACACAGTAGAATTCTGTGGCGCAGACCATGCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
3UTR-3UTR CCA 90 bp CTACTGTGTACAGTTGCTTTCTGTGTGACTCAGGAAGTTCAAGAAGGCAAATTCTTCAGAGCTGGGCTATaGACTTCTGAAGCAGCAGTT +
Preference number: 2 (lower is better)
Translates to: LLCTVAFCVTQEVQEGKFFRAGL*TSEAAV
Trigger: AACTGCTGCTTCAGAAGTCCATAGCCCAGCTCTGAA...GAATTTGCCTTCTTGAACTTCCTGAGTCACACAGAAAGCAACTGTACACAGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
3UTR-3UTR TCA 90 bp GCTGGGCTATGGACTTCTGAAGCAGCAGTTCACTGGCCGCCTAAAATAATAATTCATACAAACAGTTCATaGAACTGGTTATCTGGCAAG +
Preference number: 2 (lower is better)
Translates to: AGLWTSEAAVHWPPKIIIHTNSS*NWLSGK
Trigger: CTTGCCAGATAACCAGTTTCATGAACTGTTTGTATG...AATTATTATTTTAGGCGGCCAGTGAACTGCTGCTTCAGAAGTCCATAGCCCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
3UTR-3UTR TCA 90 bp CGCCACAGAATTCTACTGTGTACAGTTGCTTTCTGTGTGACTCAGGAAGTTCAACATACAAACAGTTCATaGAACTGGTTATCTGGCAAG +
Preference number: 2 (lower is better)
Translates to: RHRILLCTVAFCVTQEVQHTNSS*NWLSGK
Trigger: CTTGCCAGATAACCAGTTTCATGAACTGTTTGTATG...TTGAACTTCCTGAGTCACACAGAAAGCAACTGTACACAGTAGAATTCTGTGGCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
3UTR-3UTR GCA 90 bp ACAGCATGGTCTGCGCCACAGAATTCTACTGTGTACAGTTGCTTTCTGTGTGACTGTAAATTTCCAAGTTaGTTTTTAAACACTGGGTGG +
Preference number: 2 (lower is better)
Translates to: TAWSAPQNSTVYSCFLCDCKFPS*FLNTGW
Trigger: CCACCCAGTGTTTAAAAAGCAACTTGGAAATTTACA...GTCACACAGAAAGCAACTGTACACAGTAGAATTCTGTGGCGCAGACCATGCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
3UTR-3UTR CCA 90 bp AACACATTTTTACCCGGAACTTTGAAAGGTAAAAAGCGATTGCTATACAACATCCACCAACTCCAGAACTaGGCCAAGGAATGCAGGAAG +
Preference number: 2 (lower is better)
Translates to: NTFLPGTLKGKKRLLYNIHQLQN*AKECRK
Trigger: CTTCCTGCATTCCTTGGCCCAGTTCTGGAGTTGGTG...GATGTTGTATAGCAATCGCTTTTTACCTTTCAAAGTTCCGGGTAAAAATGTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
3UTR-3UTR GCA 90 bp GATGTGTTAATACAGCATGGTCTGCGCCACAGAATTCTACTGTGTACAGTTGCTTGTAAATTTCCAAGTTaGTTTTTAAACACTGGGTGG +
Preference number: 2 (lower is better)
Translates to: DVLIQHGLRHRILLCTVACKFPS*FLNTGW
Trigger: CCACCCAGTGTTTAAAAAGCAACTTGGAAATTTACA...AGCAACTGTACACAGTAGAATTCTGTGGCGCAGACCATGCTGTATTAACACATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
3UTR-3UTR CCA 90 bp CTACTGTGTACAGTTGCTTTCTGTGTGACTCAGGAAGTTCAAGAAGGCAAATTCATGAAACTGGTTATCTaGCAAGAGTTTTGGTACCAA +
Preference number: 2 (lower is better)
Translates to: LLCTVAFCVTQEVQEGKFMKLVI*QEFWYQ
Trigger: TTGGTACCAAAACTCTTGCCAGATAACCAGTTTCAT...GAATTTGCCTTCTTGAACTTCCTGAGTCACACAGAAAGCAACTGTACACAGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
3UTR-3UTR TCA 90 bp AACACATTTTTACCCGGAACTTTGAAAGGTAAAAAGCGATTGCTATACAACATCAATTTCAAGACAGTGTaGCTACCATTCCTGTTGGAG +
Preference number: 2 (lower is better)
Translates to: NTFLPGTLKGKKRLLYNINFKTV*LPFLLE
Trigger: CTCCAACAGGAATGGTAGTCACACTGTCTTGAAATT...GATGTTGTATAGCAATCGCTTTTTACCTTTCAAAGTTCCGGGTAAAAATGTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
3UTR-3UTR TCA 90 bp GAACCTGACAGATTAGTTTGGGACTGGAGTTCTAATGTTGATATGAATCAACTTTTTTACCCGGAACTTTaGAAGGTAAAAAGCGATTGC +
Preference number: 2 (lower is better)
Translates to: EPDRLVWDWSSNVDMNQLFYPEL*KVKSDC
Trigger: GCAATCGCTTTTTACCTTTCAAAGTTCCGGGTAAAA...AAGTTGATTCATATCAACATTAGAACTCCAGTCCCAAACTAATCTGTCAGGTTC
38% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
3UTR-3UTR TCA 90 bp ACTTTTGTTAAAAGTCCAAGTGGGTATCATATGCCTATTTATTCTCAGAGTGCCCCAATATTCCTACTATaGATCTTACCCTCGCAATTA +
Preference number: 2 (lower is better)
Translates to: TFVKSPSGYHMPIYSQSAPIFLL*ILPSQL
Trigger: TAATTGCGAGGGTAAGATTCATAGTAGGAATATTGG...GGCACTCTGAGAATAAATAGGCATATGATACCCACTTGGACTTTTAACAAAAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
3UTR-3UTR CCA 90 bp ACTTTTGTTAAAAGTCCAAGTGGGTATCATATGCCTATTTATTCTCAGAGTGCCATGAAACTGGTTATCTaGCAAGAGTTTTGGTACCAA +
Preference number: 2 (lower is better)
Translates to: TFVKSPSGYHMPIYSQSAMKLVI*QEFWYQ
Trigger: TTGGTACCAAAACTCTTGCCAGATAACCAGTTTCAT...GGCACTCTGAGAATAAATAGGCATATGATACCCACTTGGACTTTTAACAAAAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
3UTR-3UTR TCA 90 bp AACACATTTTTACCCGGAACTTTGAAAGGTAAAAAGCGATTGCTATACAACATCAATGATATGATGGCCTaGAACAGTAAAAAGTGGGAT +
Preference number: 2 (lower is better)
Translates to: NTFLPGTLKGKKRLLYNINDMMA*NSKKWD
Trigger: ATCCCACTTTTTACTGTTTCAGGCCATCATATCATT...GATGTTGTATAGCAATCGCTTTTTACCTTTCAAAGTTCCGGGTAAAAATGTGTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
3UTR CCA 72 bp GATGGCATTTTATCGAGAAAGTTCAGAGCTGGGCTATaGACTTCTGAAGCAGCAGTTCACTGGCCGCCTAAA +
Preference number: 3 (lower is better)
Translates to: DGILSRKFRAGL*TSEAAVHWPPK
Trigger: TTTAGGCGGCCAGTGAACTGCTGCTTCAGAAGTCCATAGCCCAGCTCTGAACTTTCTCGATAAAATGCCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
3UTR CCA 72 bp CATGTTCTGAGCCATCATCCCAGATCTGATGGAGAATaGCATGCAAAATGCCAGAATCCTGCAGCTGCAGTT +
Preference number: 3 (lower is better)
Translates to: HVLSHHPRSDGE*HAKCQNPAAAV
Trigger: AACTGCAGCTGCAGGATTCTGGCATTTTGCATGCCATTCTCCATCAGATCTGGGATGATGGCTCAGAACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
3UTR CCA 72 bp AGAGCTGGGCTATGGACTTCTGAAGCAGCAGTTCACTaGCCGCCTAAAATAATAATTGTGATAAAGGTCACC +
Preference number: 3 (lower is better)
Translates to: RAGLWTSEAAVH*PPKIIIVIKVT
Trigger: GGTGACCTTTATCACAATTATTATTTTAGGCGGCCAGTGAACTGCTGCTTCAGAAGTCCATAGCCCAGCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
3UTR-3UTR CAA 90 bp GCTGGGCTATGGACTTCTGAAGCAGCAGTTCACTGGCCGCCTAAAATAATAATTTATCTGGCAAGAGTTTaGGTACCAATAACGAAACAG +
Preference number: 3 (lower is better)
Translates to: AGLWTSEAAVHWPPKIIIYLARV*VPITKQ
Trigger: CTGTTTCGTTATTGGTACCAAAACTCTTGCCAGATA...AATTATTATTTTAGGCGGCCAGTGAACTGCTGCTTCAGAAGTCCATAGCCCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
3UTR TCA 72 bp TCCTCTACTACCACCCCAAGTAGCTTAAGAATGATATaGTGGCCTGAAACAGTAAAAAGTGGGATGTTTGGG +
Preference number: 3 (lower is better)
Translates to: SSTTTPSSLRMI*WPETVKSGMFG
Trigger: CCCAAACATCCCACTTTTTACTGTTTCAGGCCATCATATCATTCTTAAGCTACTTGGGGTGGTAGTAGAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
3UTR-3UTR CAA 90 bp AACACATTTTTACCCGGAACTTTGAAAGGTAAAAAGCGATTGCTATACAACATCTTTTCAGTTCACCTGTaGGGAAATTCAGTTTTTCCT +
Preference number: 3 (lower is better)
Translates to: NTFLPGTLKGKKRLLYNIFSVHL*GNSVFP
Trigger: AGGAAAAACTGAATTTCCCAACAGGTGAACTGAAAA...GATGTTGTATAGCAATCGCTTTTTACCTTTCAAAGTTCCGGGTAAAAATGTGTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
3UTR GCA 72 bp AAAAACTCTACACAGTCTTGCATAATAAAGACAAGCTaGTTCAATCAAATGCACCATCACAACAAATGCAGT +
Preference number: 3 (lower is better)
Translates to: KNSTQSCIIKTS*FNQMHHHNKCS
Trigger: ACTGCATTTGTTGTGATGGTGCATTTGATTGAAGCAGCTTGTCTTTATTATGCAAGACTGTGTAGAGTTTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
3UTR CCA 72 bp AGGTATTTATGTACCAGTGAACCTGACAGATTAGTTTaGGACTGGAGTTCTAATGTTGATATGAATCAACTT +
Preference number: 3 (lower is better)
Translates to: RYLCTSEPDRLV*DWSSNVDMNQL
Trigger: AAGTTGATTCATATCAACATTAGAACTCCAGTCCCAAACTAATCTGTCAGGTTCACTGGTACATAAATACCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
3UTR CCA 72 bp GATTCAATTTCAAGACAGTGTGACTACCATTCCTGTTaGAGTATTATAGAAATACAAGACACTAAACTGAGT +
Preference number: 3 (lower is better)
Translates to: DSISRQCDYHSC*SIIEIQDTKLS
Trigger: ACTCAGTTTAGTGTCTTGTATTTCTATAATACTCCAACAGGAATGGTAGTCACACTGTCTTGAAATTGAATC
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR GCA 90 bp AGAAAGTTCAGAGCTGGGCTATGGACTTCTGAAGCAGCAGTTCACTGGCCGCCTGGTGGTGCTGGGGGCTaGAGGCTGGGCGGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: RKFRAGLWTSEAAVHWPPGGAGG*RLGGRW
Trigger: CCACCTCCCGCCCAGCCTGCAGCCCCCAGCACCACC...AGGCGGCCAGTGAACTGCTGCTTCAGAAGTCCATAGCCCAGCTCTGAACTTTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR GCA 90 bp AGAAAGTTCAGAGCTGGGCTATGGACTTCTGAAGCAGCAGTTCACTGGCCGCCTGGGCTCCGAGTCCGCTaGCGCCGCGTCCTCTCAGAG +
Preference number: 4 (lower is better)
Translates to: RKFRAGLWTSEAAVHWPPGLRVR*RRVLSE
Trigger: CTCTGAGAGGACGCGGCGGCAGCGGACTCGGAGCCC...AGGCGGCCAGTGAACTGCTGCTTCAGAAGTCCATAGCCCAGCTCTGAACTTTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR TCA 90 bp ACAGCATGGTCTGCGCCACAGAATTCTACTGTGTACAGTTGCTTTCTGTGTGACGCGCCGTGCGGGTGGTaGAGCTGGAGGCCGTGGGCG +
Preference number: 4 (lower is better)
Translates to: TAWSAPQNSTVYSCFLCDAPCGW*SWRPWA
Trigger: CGCCCACGGCCTCCAGCTTCACCACCCGCACGGCGC...GTCACACAGAAAGCAACTGTACACAGTAGAATTCTGTGGCGCAGACCATGCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CCA 90 bp AGAAAGTTCAGAGCTGGGCTATGGACTTCTGAAGCAGCAGTTCACTGGCCGCCTTTACGCTGGGCGTCTTaGCAACGGGTGGGGGCGGCG +
Preference number: 4 (lower is better)
Translates to: RKFRAGLWTSEAAVHWPPLRWAS*QRVGAA
Trigger: CGCCGCCCCCACCCGTTGCCAAGACGCCCAGCGTAA...AGGCGGCCAGTGAACTGCTGCTTCAGAAGTCCATAGCCCAGCTCTGAACTTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CCA 90 bp AGAAAGTTCAGAGCTGGGCTATGGACTTCTGAAGCAGCAGTTCACTGGCCGCCTGGGGGCAGCGGTGGATaGACAGCTGGCGGATCTGAC +
Preference number: 4 (lower is better)
Translates to: RKFRAGLWTSEAAVHWPPGGSGG*TAGGSD
Trigger: GTCAGATCCGCCAGCTGTCCATCCACCGCTGCCCCC...AGGCGGCCAGTGAACTGCTGCTTCAGAAGTCCATAGCCCAGCTCTGAACTTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281419.8
CDS-3UTR TCA 90 bp CGCCACAGAATTCTACTGTGTACAGTTGCTTTCTGTGTGACTCAGGAAGTTCAAGCGCCGTGCGGGTGGTaGAGCTGGAGGCCGTGGGCG +
Preference number: 4 (lower is better)
Translates to: RHRILLCTVAFCVTQEVQAPCGW*SWRPWA
Trigger: CGCCCACGGCCTCCAGCTTCACCACCCGCACGGCGC...TTGAACTTCCTGAGTCACACAGAAAGCAACTGTACACAGTAGAATTCTGTGGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR TCA 90 bp AGAAAGTTCAGAGCTGGGCTATGGACTTCTGAAGCAGCAGTTCACTGGCCGCCTCCCCCTCGGAGAAGGTaGGCTCATCGGGGTTGTCAG +
Preference number: 4 (lower is better)
Translates to: RKFRAGLWTSEAAVHWPPPPRRR*AHRGCQ
Trigger: CTGACAACCCCGATGAGCTCACCTTCTCCGAGGGGG...AGGCGGCCAGTGAACTGCTGCTTCAGAAGTCCATAGCCCAGCTCTGAACTTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR TCA 90 bp AGAAAGTTCAGAGCTGGGCTATGGACTTCTGAAGCAGCAGTTCACTGGCCGCCTCCTCCCCGTCCACGATaGTCACATCCCCCTCGGAGA +
Preference number: 4 (lower is better)
Translates to: RKFRAGLWTSEAAVHWPPPPRPR*SHPPRR
Trigger: TCTCCGAGGGGGATGTGATCATCGTGGACGGGGAGG...AGGCGGCCAGTGAACTGCTGCTTCAGAAGTCCATAGCCCAGCTCTGAACTTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR TCA 90 bp AGAAAGTTCAGAGCTGGGCTATGGACTTCTGAAGCAGCAGTTCACTGGCCGCCTGGCAGGTTAGCAGGTTaGGCTTTGCAGGAGGCCGGT +
Preference number: 4 (lower is better)
Translates to: RKFRAGLWTSEAAVHWPPGRLAG*ALQEAG
Trigger: ACCGGCCTCCTGCAAAGCTCAACCTGCTAACCTGCC...AGGCGGCCAGTGAACTGCTGCTTCAGAAGTCCATAGCCCAGCTCTGAACTTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR GCA 90 bp GATGTGTTAATACAGCATGGTCTGCGCCACAGAATTCTACTGTGTACAGTTGCTCGCCGCCGCCTCAACTaGCGCAGCAGGCTCCGACCG +
Preference number: 4 (lower is better)
Translates to: DVLIQHGLRHRILLCTVARRRLN*RSRLRP
Trigger: CGGTCGGAGCCTGCTGCGGCAGTTGAGGCGGCGGCG...AGCAACTGTACACAGTAGAATTCTGTGGCGCAGACCATGCTGTATTAACACATC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR GCA 90 bp GGCATTAGAGAACATGGGCTGCCATACAAACAGTTCATGAAACTGGTTATCTGGGGCGCAGGCTTCTTCTaGGGGAGGCGGCTGGGCGGC +
Preference number: 4 (lower is better)
Translates to: GIREHGLPYKQFMKLVIWGAGFF*GRRLGG
Trigger: GCCGCCCAGCCGCCTCCCGCAGAAGAAGCCTGCGCC...CCAGATAACCAGTTTCATGAACTGTTTGTATGGCAGCCCATGTTCTCTAATGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CCA 90 bp GCTGGGCTATGGACTTCTGAAGCAGCAGTTCACTGGCCGCCTAAAATAATAATTAGGCTGGGCGGGAGGTaGGCTGCCACTCAGGAGGGC +
Preference number: 4 (lower is better)
Translates to: AGLWTSEAAVHWPPKIIIRLGGR*AATQEG
Trigger: GCCCTCCTGAGTGGCAGCCCACCTCCCGCCCAGCCT...AATTATTATTTTAGGCGGCCAGTGAACTGCTGCTTCAGAAGTCCATAGCCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CCA 90 bp GGCATTAGAGAACATGGGCTGCCATACAAACAGTTCATGAAACTGGTTATCTGGCTGGGGGCTGCAGGCTaGGCGGGAGGTGGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: GIREHGLPYKQFMKLVIWLGAAG*AGGGLP
Trigger: TGGCAGCCCACCTCCCGCCCAGCCTGCAGCCCCCAG...CCAGATAACCAGTTTCATGAACTGTTTGTATGGCAGCCCATGTTCTCTAATGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CCA 90 bp GGCATTAGAGAACATGGGCTGCCATACAAACAGTTCATGAAACTGGTTATCTGGTCTGCGGGAGGCGGCTaGGCGGCTGTGGGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: GIREHGLPYKQFMKLVIWSAGGG*AAVGAE
Trigger: CTCTGCCCCCACAGCCGCCCAGCCGCCTCCCGCAGA...CCAGATAACCAGTTTCATGAACTGTTTGTATGGCAGCCCATGTTCTCTAATGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CCA 90 bp GATGTGTTAATACAGCATGGTCTGCGCCACAGAATTCTACTGTGTACAGTTGCTAGGCTGGGCGGGAGGTaGGCTGCCACTCAGGAGGGC +
Preference number: 4 (lower is better)
Translates to: DVLIQHGLRHRILLCTVARLGGR*AATQEG
Trigger: GCCCTCCTGAGTGGCAGCCCACCTCCCGCCCAGCCT...AGCAACTGTACACAGTAGAATTCTGTGGCGCAGACCATGCTGTATTAACACATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CCA 90 bp AGAAAGTTCAGAGCTGGGCTATGGACTTCTGAAGCAGCAGTTCACTGGCCGCCTAGGCTTCCATTACGCTaGGCGTCTTGGCAACGGGTG +
Preference number: 4 (lower is better)
Translates to: RKFRAGLWTSEAAVHWPPRLPLR*ASWQRV
Trigger: CACCCGTTGCCAAGACGCCCAGCGTAATGGAAGCCT...AGGCGGCCAGTGAACTGCTGCTTCAGAAGTCCATAGCCCAGCTCTGAACTTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR GCA 90 bp GCTGGGCTATGGACTTCTGAAGCAGCAGTTCACTGGCCGCCTAAAATAATAATTCAGGCGGGGCAGGCTTaGTCGGCTGGCTCAAGGCTT +
Preference number: 4 (lower is better)
Translates to: AGLWTSEAAVHWPPKIIIQAGQA*SAGSRL
Trigger: AAGCCTTGAGCCAGCCGAGCAAGCCTGCCCCGCCTG...AATTATTATTTTAGGCGGCCAGTGAACTGCTGCTTCAGAAGTCCATAGCCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR GCA 90 bp AGAAAGTTCAGAGCTGGGCTATGGACTTCTGAAGCAGCAGTTCACTGGCCGCCTCCGGGAATGCGCCTTTaGGACCAGGATCTCCATCAA +
Preference number: 4 (lower is better)
Translates to: RKFRAGLWTSEAAVHWPPPGMRL*DQDLHQ
Trigger: TTGATGGAGATCCTGGTCGCAAAGGCGCATTCCCGG...AGGCGGCCAGTGAACTGCTGCTTCAGAAGTCCATAGCCCAGCTCTGAACTTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CCA 90 bp GCTGGGCTATGGACTTCTGAAGCAGCAGTTCACTGGCCGCCTAAAATAATAATTTCCGACACGGAGATCTaGTCCGGCATCGCCTCGGCG +
Preference number: 4 (lower is better)
Translates to: AGLWTSEAAVHWPPKIIISDTEI*SGIASA
Trigger: CGCCGAGGCGATGCCGGACCAGATCTCCGTGTCGGA...AATTATTATTTTAGGCGGCCAGTGAACTGCTGCTTCAGAAGTCCATAGCCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CCA 90 bp ACAGCATGGTCTGCGCCACAGAATTCTACTGTGTACAGTTGCTTTCTGTGTGACCCAAAGCCTCCTCGATaGCCGCCACAGTGTTCCGGC +
Preference number: 4 (lower is better)
Translates to: TAWSAPQNSTVYSCFLCDPKPPR*PPQCSG
Trigger: GCCGGAACACTGTGGCGGCCATCGAGGAGGCTTTGG...GTCACACAGAAAGCAACTGTACACAGTAGAATTCTGTGGCGCAGACCATGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CCA 90 bp CTACTGTGTACAGTTGCTTTCTGTGTGACTCAGGAAGTTCAAGAAGGCAAATTCCGTCTTGGCAACGGGTaGGGGCGGCGTGGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: LLCTVAFCVTQEVQEGKFRLGNG*GRRGGQ
Trigger: CTGACCCCCACGCCGCCCCCACCCGTTGCCAAGACG...GAATTTGCCTTCTTGAACTTCCTGAGTCACACAGAAAGCAACTGTACACAGTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR TCA 90 bp ACAGCATGGTCTGCGCCACAGAATTCTACTGTGTACAGTTGCTTTCTGTGTGACGGCAGGTTAGCAGGTTaGGCTTTGCAGGAGGCCGGT +
Preference number: 4 (lower is better)
Translates to: TAWSAPQNSTVYSCFLCDGRLAG*ALQEAG
Trigger: ACCGGCCTCCTGCAAAGCTCAACCTGCTAACCTGCC...GTCACACAGAAAGCAACTGTACACAGTAGAATTCTGTGGCGCAGACCATGCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR TCA 90 bp GCTGGGCTATGGACTTCTGAAGCAGCAGTTCACTGGCCGCCTAAAATAATAATTCCCGCAGGAGCAACTTaGGGCACTCGGCATTGTCGG +
Preference number: 4 (lower is better)
Translates to: AGLWTSEAAVHWPPKIIIPAGAT*GTRHCR
Trigger: CCGACAATGCCGAGTGCCTCAAGTTGCTCCTGCGGG...AATTATTATTTTAGGCGGCCAGTGAACTGCTGCTTCAGAAGTCCATAGCCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR TCA 90 bp CGCCACAGAATTCTACTGTGTACAGTTGCTTTCTGTGTGACTCAGGAAGTTCAACCAGCTGGTAGAAGCTaGTGGGCCGGTCTTCCCGCC +
Preference number: 4 (lower is better)
Translates to: RHRILLCTVAFCVTQEVQPAGRS*WAGLPA
Trigger: GGCGGGAAGACCGGCCCATCAGCTTCTACCAGCTGG...TTGAACTTCCTGAGTCACACAGAAAGCAACTGTACACAGTAGAATTCTGTGGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CCA 90 bp GCTGGGCTATGGACTTCTGAAGCAGCAGTTCACTGGCCGCCTAAAATAATAATTCCAAAGCCTCCTCGATaGCCGCCACAGTGTTCCGGC +
Preference number: 4 (lower is better)
Translates to: AGLWTSEAAVHWPPKIIIPKPPR*PPQCSG
Trigger: GCCGGAACACTGTGGCGGCCATCGAGGAGGCTTTGG...AATTATTATTTTAGGCGGCCAGTGAACTGCTGCTTCAGAAGTCCATAGCCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR TCA 90 bp CGCCACAGAATTCTACTGTGTACAGTTGCTTTCTGTGTGACTCAGGAAGTTCAACCCCCTCGGAGAAGGTaGGCTCATCGGGGTTGTCAG +
Preference number: 4 (lower is better)
Translates to: RHRILLCTVAFCVTQEVQPPRRR*AHRGCQ
Trigger: CTGACAACCCCGATGAGCTCACCTTCTCCGAGGGGG...TTGAACTTCCTGAGTCACACAGAAAGCAACTGTACACAGTAGAATTCTGTGGCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR GCA 90 bp ACTTTTGTTAAAAGTCCAAGTGGGTATCATATGCCTATTTATTCTCAGAGTGCCCGCCGCCGCCTCAACTaGCGCAGCAGGCTCCGACCG +
Preference number: 4 (lower is better)
Translates to: TFVKSPSGYHMPIYSQSARRRLN*RSRLRP
Trigger: CGGTCGGAGCCTGCTGCGGCAGTTGAGGCGGCGGCG...GGCACTCTGAGAATAAATAGGCATATGATACCCACTTGGACTTTTAACAAAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR GCA 90 bp GATGTGTTAATACAGCATGGTCTGCGCCACAGAATTCTACTGTGTACAGTTGCTACAGTGTTCCGGCACTaGGCCGTGCGGGTGGTGAAG +
Preference number: 4 (lower is better)
Translates to: DVLIQHGLRHRILLCTVATVFRH*AVRVVK
Trigger: CTTCACCACCCGCACGGCGCAGTGCCGGAACACTGT...AGCAACTGTACACAGTAGAATTCTGTGGCGCAGACCATGCTGTATTAACACATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR GCA 90 bp AGAAAGTTCAGAGCTGGGCTATGGACTTCTGAAGCAGCAGTTCACTGGCCGCCTTTGCCCGTCATCCTCTaGACTTCTGAGATGATCTCC +
Preference number: 4 (lower is better)
Translates to: RKFRAGLWTSEAAVHWPPLPVIL*TSEMIS
Trigger: GGAGATCATCTCAGAAGTGCAGAGGATGACGGGCAA...AGGCGGCCAGTGAACTGCTGCTTCAGAAGTCCATAGCCCAGCTCTGAACTTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR GCA 90 bp ACTTTTGTTAAAAGTCCAAGTGGGTATCATATGCCTATTTATTCTCAGAGTGCCGGCGCAGGCTTCTTCTaGGGGAGGCGGCTGGGCGGC +
Preference number: 4 (lower is better)
Translates to: TFVKSPSGYHMPIYSQSAGAGFF*GRRLGG
Trigger: GCCGCCCAGCCGCCTCCCGCAGAAGAAGCCTGCGCC...GGCACTCTGAGAATAAATAGGCATATGATACCCACTTGGACTTTTAACAAAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CCA 90 bp AGAAAGTTCAGAGCTGGGCTATGGACTTCTGAAGCAGCAGTTCACTGGCCGCCTTCAGGGACTGCATCCTaGAATAATGAACCCCCAGCT +
Preference number: 4 (lower is better)
Translates to: RKFRAGLWTSEAAVHWPPSGTAS*NNEPPA
Trigger: AGCTGGGGGTTCATTATTCCAGGATGCAGTCCCTGA...AGGCGGCCAGTGAACTGCTGCTTCAGAAGTCCATAGCCCAGCTCTGAACTTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CCA 90 bp ACAGCATGGTCTGCGCCACAGAATTCTACTGTGTACAGTTGCTTTCTGTGTGACCGTTTGCTATCTCGATaGAGGCCTTCCCCCGCAGGA +
Preference number: 4 (lower is better)
Translates to: TAWSAPQNSTVYSCFLCDRLLSR*RPSPAG
Trigger: TCCTGCGGGGGAAGGCCTCCATCGAGATAGCAAACG...GTCACACAGAAAGCAACTGTACACAGTAGAATTCTGTGGCGCAGACCATGCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CCA 90 bp ACTTTTGTTAAAAGTCCAAGTGGGTATCATATGCCTATTTATTCTCAGAGTGCCCTGGGGGCTGCAGGCTaGGCGGGAGGTGGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: TFVKSPSGYHMPIYSQSALGAAG*AGGGLP
Trigger: TGGCAGCCCACCTCCCGCCCAGCCTGCAGCCCCCAG...GGCACTCTGAGAATAAATAGGCATATGATACCCACTTGGACTTTTAACAAAAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CCA 90 bp GGCATTAGAGAACATGGGCTGCCATACAAACAGTTCATGAAACTGGTTATCTGGTGTTGGTCAGTGGGGTaGACTTGTCAGCCCCCGGCG +
Preference number: 4 (lower is better)
Translates to: GIREHGLPYKQFMKLVIWCWSVG*TCQPPA
Trigger: CGCCGGGGGCTGACAAGTCCACCCCACTGACCAACA...CCAGATAACCAGTTTCATGAACTGTTTGTATGGCAGCCCATGTTCTCTAATGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CCA 90 bp GATGTGTTAATACAGCATGGTCTGCGCCACAGAATTCTACTGTGTACAGTTGCTTGTTGGTCAGTGGGGTaGACTTGTCAGCCCCCGGCG +
Preference number: 4 (lower is better)
Translates to: DVLIQHGLRHRILLCTVACWSVG*TCQPPA
Trigger: CGCCGGGGGCTGACAAGTCCACCCCACTGACCAACA...AGCAACTGTACACAGTAGAATTCTGTGGCGCAGACCATGCTGTATTAACACATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR TCA 90 bp GGCATTAGAGAACATGGGCTGCCATACAAACAGTTCATGAAACTGGTTATCTGGTTCGATCCACGGATCTaGCTGCAAGGTGGAGGGCCG +
Preference number: 4 (lower is better)
Translates to: GIREHGLPYKQFMKLVIWFDPRI*LQGGGP
Trigger: CGGCCCTCCACCTTGCAGTCAGATCCGTGGATCGAA...CCAGATAACCAGTTTCATGAACTGTTTGTATGGCAGCCCATGTTCTCTAATGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR TCA 90 bp AGAAAGTTCAGAGCTGGGCTATGGACTTCTGAAGCAGCAGTTCACTGGCCGCCTGATAAAGTGCACAAATaGCACCGGGAATGCGCCTTT +
Preference number: 4 (lower is better)
Translates to: RKFRAGLWTSEAAVHWPPDKVHK*HRECAF
Trigger: AAAGGCGCATTCCCGGTGTCATTTGTGCACTTTATC...AGGCGGCCAGTGAACTGCTGCTTCAGAAGTCCATAGCCCAGCTCTGAACTTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR GCA 90 bp GAACCTGACAGATTAGTTTGGGACTGGAGTTCTAATGTTGATATGAATCAACTTGGGCTCCGAGTCCGCTaGCGCCGCGTCCTCTCAGAG +
Preference number: 4 (lower is better)
Translates to: EPDRLVWDWSSNVDMNQLGLRVR*RRVLSE
Trigger: CTCTGAGAGGACGCGGCGGCAGCGGACTCGGAGCCC...AAGTTGATTCATATCAACATTAGAACTCCAGTCCCAAACTAATCTGTCAGGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR GCA 90 bp GCTGGGCTATGGACTTCTGAAGCAGCAGTTCACTGGCCGCCTAAAATAATAATTCGATGCAGGTCAGGATaGCCAGGTTGGTGGAAAGCC +
Preference number: 4 (lower is better)
Translates to: AGLWTSEAAVHWPPKIIIRCRSG*PGWWKA
Trigger: GGCTTTCCACCAACCTGGGCATCCTGACCTGCATCG...AATTATTATTTTAGGCGGCCAGTGAACTGCTGCTTCAGAAGTCCATAGCCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR GCA 90 bp AGAAAGTTCAGAGCTGGGCTATGGACTTCTGAAGCAGCAGTTCACTGGCCGCCTGATGTAGTCCTTTCTTaGATTCATGTCGCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: RKFRAGLWTSEAAVHWPPDVVLS*IHVAAW
Trigger: CCAGGCAGCGACATGAATGCAAGAAAGGACTACATC...AGGCGGCCAGTGAACTGCTGCTTCAGAAGTCCATAGCCCAGCTCTGAACTTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR GCA 90 bp ACAGCATGGTCTGCGCCACAGAATTCTACTGTGTACAGTTGCTTTCTGTGTGACATCCACGGATCTGACTaGAAGGTGGAGGGCCGTTTC +
Preference number: 4 (lower is better)
Translates to: TAWSAPQNSTVYSCFLCDIHGSD*KVEGRF
Trigger: GAAACGGCCCTCCACCTTGCAGTCAGATCCGTGGAT...GTCACACAGAAAGCAACTGTACACAGTAGAATTCTGTGGCGCAGACCATGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR GCA 90 bp AACACATTTTTACCCGGAACTTTGAAAGGTAAAAAGCGATTGCTATACAACATCGGTGGTGCTGGGGGCTaGAGGCTGGGCGGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: NTFLPGTLKGKKRLLYNIGGAGG*RLGGRW
Trigger: CCACCTCCCGCCCAGCCTGCAGCCCCCAGCACCACC...GATGTTGTATAGCAATCGCTTTTTACCTTTCAAAGTTCCGGGTAAAAATGTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR GCA 90 bp ACAGCATGGTCTGCGCCACAGAATTCTACTGTGTACAGTTGCTTTCTGTGTGACACCCAGAGCTTCCGTTaGAGAGAGATCCACAGGTCC +
Preference number: 4 (lower is better)
Translates to: TAWSAPQNSTVYSCFLCDTQSFR*REIHRS
Trigger: GGACCTGTGGATCTCTCTGCAACGGAAGCTCTGGGT...GTCACACAGAAAGCAACTGTACACAGTAGAATTCTGTGGCGCAGACCATGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CCA 90 bp GCTGGGCTATGGACTTCTGAAGCAGCAGTTCACTGGCCGCCTAAAATAATAATTGGTCTTCCCGCCGGTTaGGACTGGGCTGCAATTTCT +
Preference number: 4 (lower is better)
Translates to: AGLWTSEAAVHWPPKIIIGLPAG*DWAAIS
Trigger: AGAAATTGCAGCCCAGTCCCAACCGGCGGGAAGACC...AATTATTATTTTAGGCGGCCAGTGAACTGCTGCTTCAGAAGTCCATAGCCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CCA 90 bp GAACCTGACAGATTAGTTTGGGACTGGAGTTCTAATGTTGATATGAATCAACTTCGTCTTGGCAACGGGTaGGGGCGGCGTGGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: EPDRLVWDWSSNVDMNQLRLGNG*GRRGGQ
Trigger: CTGACCCCCACGCCGCCCCCACCCGTTGCCAAGACG...AAGTTGATTCATATCAACATTAGAACTCCAGTCCCAAACTAATCTGTCAGGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CCA 90 bp AACACATTTTTACCCGGAACTTTGAAAGGTAAAAAGCGATTGCTATACAACATCTCTGCGGGAGGCGGCTaGGCGGCTGTGGGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: NTFLPGTLKGKKRLLYNISAGGG*AAVGAE
Trigger: CTCTGCCCCCACAGCCGCCCAGCCGCCTCCCGCAGA...GATGTTGTATAGCAATCGCTTTTTACCTTTCAAAGTTCCGGGTAAAAATGTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR TCA 90 bp AGAAAGTTCAGAGCTGGGCTATGGACTTCTGAAGCAGCAGTTCACTGGCCGCCTCTCCTTTGTAAACACTaGGAACTTCAGGAACGCACT +
Preference number: 4 (lower is better)
Translates to: RKFRAGLWTSEAAVHWPPLLCKH*ELQERT
Trigger: AGTGCGTTCCTGAAGTTCTCAGTGTTTACAAAGGAG...AGGCGGCCAGTGAACTGCTGCTTCAGAAGTCCATAGCCCAGCTCTGAACTTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR TCA 90 bp GATGTGTTAATACAGCATGGTCTGCGCCACAGAATTCTACTGTGTACAGTTGCTGCCTCGCAAAGACTGTaGAGCTTCGCCGCGTTATCC +
Preference number: 4 (lower is better)
Translates to: DVLIQHGLRHRILLCTVAASQRL*SFAALS
Trigger: GGATAACGCGGCGAAGCTTCACAGTCTTTGCGAGGC...AGCAACTGTACACAGTAGAATTCTGTGGCGCAGACCATGCTGTATTAACACATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR TCA 90 bp CGCCACAGAATTCTACTGTGTACAGTTGCTTTCTGTGTGACTCAGGAAGTTCAAGCCTCGCAAAGACTGTaGAGCTTCGCCGCGTTATCC +
Preference number: 4 (lower is better)
Translates to: RHRILLCTVAFCVTQEVQASQRL*SFAALS
Trigger: GGATAACGCGGCGAAGCTTCACAGTCTTTGCGAGGC...TTGAACTTCCTGAGTCACACAGAAAGCAACTGTACACAGTAGAATTCTGTGGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR TCA 90 bp ACAGCATGGTCTGCGCCACAGAATTCTACTGTGTACAGTTGCTTTCTGTGTGACCAGCGGAGTCTCTCCTaGCTCGTTTGCTATCTCGAT +
Preference number: 4 (lower is better)
Translates to: TAWSAPQNSTVYSCFLCDQRSLS*LVCYLD
Trigger: ATCGAGATAGCAAACGAGTCAGGAGAGACTCCGCTG...GTCACACAGAAAGCAACTGTACACAGTAGAATTCTGTGGCGCAGACCATGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR GCA 90 bp AGAAAGTTCAGAGCTGGGCTATGGACTTCTGAAGCAGCAGTTCACTGGCCGCCTGAACATTTCCTTTTCTaGCACACTTTTCGGATCCCG +
Preference number: 4 (lower is better)
Translates to: RKFRAGLWTSEAAVHWPPEHFLF*HTFRIP
Trigger: CGGGATCCGAAAAGTGTGGCAGAAAAGGAAATGTTC...AGGCGGCCAGTGAACTGCTGCTTCAGAAGTCCATAGCCCAGCTCTGAACTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR GCA 90 bp ACAGCATGGTCTGCGCCACAGAATTCTACTGTGTACAGTTGCTTTCTGTGTGACCACAGCAGACGTCATTaGCCGTCATCCTCTGCACTT +
Preference number: 4 (lower is better)
Translates to: TAWSAPQNSTVYSCFLCDHSRRH*PSSSAL
Trigger: AAGTGCAGAGGATGACGGGCAATGACGTCTGCTGTG...GTCACACAGAAAGCAACTGTACACAGTAGAATTCTGTGGCGCAGACCATGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR GCA 90 bp GCTGGGCTATGGACTTCTGAAGCAGCAGTTCACTGGCCGCCTAAAATAATAATTTTCCGGAACACTCGATaGAGGTCAGGATGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: AGLWTSEAAVHWPPKIIIFRNTR*RSGCPG
Trigger: ACCTGGGCATCCTGACCTGCATCGAGTGTTCCGGAA...AATTATTATTTTAGGCGGCCAGTGAACTGCTGCTTCAGAAGTCCATAGCCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR GCA 90 bp GCTGGGCTATGGACTTCTGAAGCAGCAGTTCACTGGCCGCCTAAAATAATAATTTCCTCACAGTGCTCGTaGTTGAGGCGCTTGGCAATG +
Preference number: 4 (lower is better)
Translates to: AGLWTSEAAVHWPPKIIISSQCS*LRRLAM
Trigger: CATTGCCAAGCGCCTCAAGCACGAGCACTGTGAGGA...AATTATTATTTTAGGCGGCCAGTGAACTGCTGCTTCAGAAGTCCATAGCCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR GCA 90 bp ACAGCATGGTCTGCGCCACAGAATTCTACTGTGTACAGTTGCTTTCTGTGTGACGGGTCAGGGGATCTTTaGCAACATTCCGTGGAGGAA +
Preference number: 4 (lower is better)
Translates to: TAWSAPQNSTVYSCFLCDGSGDL*QHSVEE
Trigger: TTCCTCCACGGAATGTTGGCAAAGATCCCCTGACCC...GTCACACAGAAAGCAACTGTACACAGTAGAATTCTGTGGCGCAGACCATGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315273.4
CDS-3UTR GCA 90 bp AGAAAGTTCAGAGCTGGGCTATGGACTTCTGAAGCAGCAGTTCACTGGCCGCCTCAGTCAGCGATAAAGTaGACAAATGACACCGGGAAT +
Preference number: 4 (lower is better)
Translates to: RKFRAGLWTSEAAVHWPPQSAIK*TNDTGN
Trigger: ATTCCCGGTGTCATTTGTGCACTTTATCGCTGACTG...AGGCGGCCAGTGAACTGCTGCTTCAGAAGTCCATAGCCCAGCTCTGAACTTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CCA 90 bp AGAAAGTTCAGAGCTGGGCTATGGACTTCTGAAGCAGCAGTTCACTGGCCGCCTAACTTCTCCAGAGCCTaGGTGTACTGCTCTTCATTT +
Preference number: 4 (lower is better)
Translates to: RKFRAGLWTSEAAVHWPPNFSRA*VYCSSF
Trigger: AAATGAAGAGCAGTACACCCAGGCTCTGGAGAAGTT...AGGCGGCCAGTGAACTGCTGCTTCAGAAGTCCATAGCCCAGCTCTGAACTTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CCA 90 bp CGCCACAGAATTCTACTGTGTACAGTTGCTTTCTGTGTGACTCAGGAAGTTCAAACCCCCAGCTCTCGGTaGATTCCGGAACACTCGATG +
Preference number: 4 (lower is better)
Translates to: RHRILLCTVAFCVTQEVQTPSSR*IPEHSM
Trigger: CATCGAGTGTTCCGGAATCCACCGAGAGCTGGGGGT...TTGAACTTCCTGAGTCACACAGAAAGCAACTGTACACAGTAGAATTCTGTGGCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CCA 90 bp GGCATTAGAGAACATGGGCTGCCATACAAACAGTTCATGAAACTGGTTATCTGGGATCTGACTGCAAGGTaGAGGGCCGTTTCATCCGGC +
Preference number: 4 (lower is better)
Translates to: GIREHGLPYKQFMKLVIWDLTAR*RAVSSG
Trigger: GCCGGATGAAACGGCCCTCCACCTTGCAGTCAGATC...CCAGATAACCAGTTTCATGAACTGTTTGTATGGCAGCCCATGTTCTCTAATGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CCA 90 bp GATGTGTTAATACAGCATGGTCTGCGCCACAGAATTCTACTGTGTACAGTTGCTCGTTTGCTATCTCGATaGAGGCCTTCCCCCGCAGGA +
Preference number: 4 (lower is better)
Translates to: DVLIQHGLRHRILLCTVARLLSR*RPSPAG
Trigger: TCCTGCGGGGGAAGGCCTCCATCGAGATAGCAAACG...AGCAACTGTACACAGTAGAATTCTGTGGCGCAGACCATGCTGTATTAACACATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CCA 90 bp GGCATTAGAGAACATGGGCTGCCATACAAACAGTTCATGAAACTGGTTATCTGGCCCGCCGGTTGGGACTaGGCTGCAATTTCTCATCCA +
Preference number: 4 (lower is better)
Translates to: GIREHGLPYKQFMKLVIWPAGWD*AAISHP
Trigger: TGGATGAGAAATTGCAGCCCAGTCCCAACCGGCGGG...CCAGATAACCAGTTTCATGAACTGTTTGTATGGCAGCCCATGTTCTCTAATGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CCA 90 bp GATGTGTTAATACAGCATGGTCTGCGCCACAGAATTCTACTGTGTACAGTTGCTCCCGCCGGTTGGGACTaGGCTGCAATTTCTCATCCA +
Preference number: 4 (lower is better)
Translates to: DVLIQHGLRHRILLCTVAPAGWD*AAISHP
Trigger: TGGATGAGAAATTGCAGCCCAGTCCCAACCGGCGGG...AGCAACTGTACACAGTAGAATTCTGTGGCGCAGACCATGCTGTATTAACACATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CCA 90 bp GATGTGTTAATACAGCATGGTCTGCGCCACAGAATTCTACTGTGTACAGTTGCTGGTCTTCCCGCCGGTTaGGACTGGGCTGCAATTTCT +
Preference number: 4 (lower is better)
Translates to: DVLIQHGLRHRILLCTVAGLPAG*DWAAIS
Trigger: AGAAATTGCAGCCCAGTCCCAACCGGCGGGAAGACC...AGCAACTGTACACAGTAGAATTCTGTGGCGCAGACCATGCTGTATTAACACATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CCA 90 bp ACTTTTGTTAAAAGTCCAAGTGGGTATCATATGCCTATTTATTCTCAGAGTGCCTTACGCTGGGCGTCTTaGCAACGGGTGGGGGCGGCG +
Preference number: 4 (lower is better)
Translates to: TFVKSPSGYHMPIYSQSALRWAS*QRVGAA
Trigger: CGCCGCCCCCACCCGTTGCCAAGACGCCCAGCGTAA...GGCACTCTGAGAATAAATAGGCATATGATACCCACTTGGACTTTTAACAAAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CCA 90 bp GATGTGTTAATACAGCATGGTCTGCGCCACAGAATTCTACTGTGTACAGTTGCTGCAGGCTTGCTCGGCTaGCTCAAGGCTTCCATTACG +
Preference number: 4 (lower is better)
Translates to: DVLIQHGLRHRILLCTVAAGLLG*LKASIT
Trigger: CGTAATGGAAGCCTTGAGCCAGCCGAGCAAGCCTGC...AGCAACTGTACACAGTAGAATTCTGTGGCGCAGACCATGCTGTATTAACACATC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CCA 90 bp ACAGCATGGTCTGCGCCACAGAATTCTACTGTGTACAGTTGCTTTCTGTGTGACGGATCTCCATCAATGTaGCCAATCCACCACTCCTGG +
Preference number: 4 (lower is better)
Translates to: TAWSAPQNSTVYSCFLCDGSPSM*PIHHSW
Trigger: CCAGGAGTGGTGGATTGGCCACATTGATGGAGATCC...GTCACACAGAAAGCAACTGTACACAGTAGAATTCTGTGGCGCAGACCATGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR TCA 90 bp CGCCACAGAATTCTACTGTGTACAGTTGCTTTCTGTGTGACTCAGGAAGTTCAATGCCTGGGTTGGGTTTaGCTGAGTCCTCAGCTGGTA +
Preference number: 4 (lower is better)
Translates to: RHRILLCTVAFCVTQEVQCLGWV*LSPQLV
Trigger: TACCAGCTGAGGACTCAGTCAAACCCAACCCAGGCA...TTGAACTTCCTGAGTCACACAGAAAGCAACTGTACACAGTAGAATTCTGTGGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR TCA 90 bp AGAAAGTTCAGAGCTGGGCTATGGACTTCTGAAGCAGCAGTTCACTGGCCGCCTAAAAAGTCTACAATGTaGAGAGAGGTTCGATCCACG +
Preference number: 4 (lower is better)
Translates to: RKFRAGLWTSEAAVHWPPKKSTM*REVRST
Trigger: CGTGGATCGAACCTCTCTTCACATTGTAGACTTTTT...AGGCGGCCAGTGAACTGCTGCTTCAGAAGTCCATAGCCCAGCTCTGAACTTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR TCA 90 bp GGCATTAGAGAACATGGGCTGCCATACAAACAGTTCATGAAACTGGTTATCTGGGCAAGATGCTGGGCATaGAAGCCCTCTGCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: GIREHGLPYKQFMKLVIWARCWA*KPSASP
Trigger: AGGAGAAGCAGAGGGCTTTCATGCCCAGCATCTTGC...CCAGATAACCAGTTTCATGAACTGTTTGTATGGCAGCCCATGTTCTCTAATGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR TCA 90 bp GCTGGGCTATGGACTTCTGAAGCAGCAGTTCACTGGCCGCCTAAAATAATAATTGCAGAGGAGGCTGTCTaGACTTTGCCAACATTCCGT +
Preference number: 4 (lower is better)
Translates to: AGLWTSEAAVHWPPKIIIAEEAV*TLPTFR
Trigger: ACGGAATGTTGGCAAAGTTCAGACAGCCTCCTCTGC...AATTATTATTTTAGGCGGCCAGTGAACTGCTGCTTCAGAAGTCCATAGCCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281419.8
CDS-3UTR GCA 90 bp AGAAAGTTCAGAGCTGGGCTATGGACTTCTGAAGCAGCAGTTCACTGGCCGCCTCCCAGAGCTGTTGATTaGTTTCACGGATTTCTTCAT +
Preference number: 4 (lower is better)
Translates to: RKFRAGLWTSEAAVHWPPPRAVD*FHGFLH
Trigger: ATGAAGAAATCCGTGAAAGCAATCAACAGCTCTGGG...AGGCGGCCAGTGAACTGCTGCTTCAGAAGTCCATAGCCCAGCTCTGAACTTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR GCA 90 bp GGCATTAGAGAACATGGGCTGCCATACAAACAGTTCATGAAACTGGTTATCTGGTCTTCTTGTAGAGGCTaGCGTTCCGCTCGGTCCCAT +
Preference number: 4 (lower is better)
Translates to: GIREHGLPYKQFMKLVIWSSCRG*RSARSH
Trigger: ATGGGACCGAGCGGAACGGCAGCCTCTACAAGAAGA...CCAGATAACCAGTTTCATGAACTGTTTGTATGGCAGCCCATGTTCTCTAATGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR GCA 90 bp GCTGGGCTATGGACTTCTGAAGCAGCAGTTCACTGGCCGCCTAAAATAATAATTCACAGCAGACGTCATTaGCCGTCATCCTCTGCACTT +
Preference number: 4 (lower is better)
Translates to: AGLWTSEAAVHWPPKIIIHSRRH*PSSSAL
Trigger: AAGTGCAGAGGATGACGGGCAATGACGTCTGCTGTG...AATTATTATTTTAGGCGGCCAGTGAACTGCTGCTTCAGAAGTCCATAGCCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR GCA 90 bp GGCATTAGAGAACATGGGCTGCCATACAAACAGTTCATGAAACTGGTTATCTGGTTCCGGAACACTCGATaGAGGTCAGGATGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: GIREHGLPYKQFMKLVIWFRNTR*RSGCPG
Trigger: ACCTGGGCATCCTGACCTGCATCGAGTGTTCCGGAA...CCAGATAACCAGTTTCATGAACTGTTTGTATGGCAGCCCATGTTCTCTAATGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR GCA 90 bp ACAGCATGGTCTGCGCCACAGAATTCTACTGTGTACAGTTGCTTTCTGTGTGACCGCGTGCTTCTTCCTTaGGTATCTCCTCTCGATGTA +
Preference number: 4 (lower is better)
Translates to: TAWSAPQNSTVYSCFLCDRVLLP*VSPLDV
Trigger: TACATCGAGAGGAGATACGCAAGGAAGAAGCACGCG...GTCACACAGAAAGCAACTGTACACAGTAGAATTCTGTGGCGCAGACCATGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR GCA 90 bp GATGTGTTAATACAGCATGGTCTGCGCCACAGAATTCTACTGTGTACAGTTGCTGCCGCGTTATCCGCGTaGTTCTTCCTTGCGTATCTC +
Preference number: 4 (lower is better)
Translates to: DVLIQHGLRHRILLCTVAAALSA*FFLAYL
Trigger: GAGATACGCAAGGAAGAAGCACGCGGATAACGCGGC...AGCAACTGTACACAGTAGAATTCTGTGGCGCAGACCATGCTGTATTAACACATC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR GCA 90 bp GGCATTAGAGAACATGGGCTGCCATACAAACAGTTCATGAAACTGGTTATCTGGATCCACGGATCTGACTaGAAGGTGGAGGGCCGTTTC +
Preference number: 4 (lower is better)
Translates to: GIREHGLPYKQFMKLVIWIHGSD*KVEGRF
Trigger: GAAACGGCCCTCCACCTTGCAGTCAGATCCGTGGAT...CCAGATAACCAGTTTCATGAACTGTTTGTATGGCAGCCCATGTTCTCTAATGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR GCA 90 bp ACAGCATGGTCTGCGCCACAGAATTCTACTGTGTACAGTTGCTTTCTGTGTGACAGTGCAGGGCTGTGCTaGCTTTCCCTGTCTGTTTAT +
Preference number: 4 (lower is better)
Translates to: TAWSAPQNSTVYSCFLCDSAGLC*LSLSVY
Trigger: ATAAACAGACAGGGAAAGGCAGCACAGCCCTGCACT...GTCACACAGAAAGCAACTGTACACAGTAGAATTCTGTGGCGCAGACCATGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR GCA 90 bp GCTGGGCTATGGACTTCTGAAGCAGCAGTTCACTGGCCGCCTAAAATAATAATTAGTAGTGCAGGGCTGTaGTGCCTTTCCCTGTCTGTT +
Preference number: 4 (lower is better)
Translates to: AGLWTSEAAVHWPPKIIISSAGL*CLSLSV
Trigger: AACAGACAGGGAAAGGCAGCACAGCCCTGCACTACT...AATTATTATTTTAGGCGGCCAGTGAACTGCTGCTTCAGAAGTCCATAGCCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR GCA 90 bp GATGTGTTAATACAGCATGGTCTGCGCCACAGAATTCTACTGTGTACAGTTGCTTCCTCACAGTGCTCGTaGTTGAGGCGCTTGGCAATG +
Preference number: 4 (lower is better)
Translates to: DVLIQHGLRHRILLCTVASSQCS*LRRLAM
Trigger: CATTGCCAAGCGCCTCAAGCACGAGCACTGTGAGGA...AGCAACTGTACACAGTAGAATTCTGTGGCGCAGACCATGCTGTATTAACACATC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR GCA 90 bp CTACTGTGTACAGTTGCTTTCTGTGTGACTCAGGAAGTTCAAGAAGGCAAATTCAGCAGCTCCTCACAGTaGTCGTGCTTGAGGCGCTTG +
Preference number: 4 (lower is better)
Translates to: LLCTVAFCVTQEVQEGKFSSSSQ*SCLRRL
Trigger: CAAGCGCCTCAAGCACGAGCACTGTGAGGAGCTGCT...GAATTTGCCTTCTTGAACTTCCTGAGTCACACAGAAAGCAACTGTACACAGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR GCA 90 bp GGCATTAGAGAACATGGGCTGCCATACAAACAGTTCATGAAACTGGTTATCTGGACCCAGAGCTTCCGTTaGAGAGAGATCCACAGGTCC +
Preference number: 4 (lower is better)
Translates to: GIREHGLPYKQFMKLVIWTQSFR*REIHRS
Trigger: GGACCTGTGGATCTCTCTGCAACGGAAGCTCTGGGT...CCAGATAACCAGTTTCATGAACTGTTTGTATGGCAGCCCATGTTCTCTAATGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR GCA 90 bp GGCATTAGAGAACATGGGCTGCCATACAAACAGTTCATGAAACTGGTTATCTGGCCGGGAATGCGCCTTTaGGACCAGGATCTCCATCAA +
Preference number: 4 (lower is better)
Translates to: GIREHGLPYKQFMKLVIWPGMRL*DQDLHQ
Trigger: TTGATGGAGATCCTGGTCGCAAAGGCGCATTCCCGG...CCAGATAACCAGTTTCATGAACTGTTTGTATGGCAGCCCATGTTCTCTAATGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR GCA 90 bp CTACTGTGTACAGTTGCTTTCTGTGTGACTCAGGAAGTTCAAGAAGGCAAATTCTCTGACGAAGATCGCTaGCGGCTTCCACCGTCCACA +
Preference number: 4 (lower is better)
Translates to: LLCTVAFCVTQEVQEGKFSDEDR*RLPPST
Trigger: TGTGGACGGTGGAAGCCGGCAGCGATCTTCGTCAGA...GAATTTGCCTTCTTGAACTTCCTGAGTCACACAGAAAGCAACTGTACACAGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281419.8
CDS-3UTR CCA 90 bp GATGTGTTAATACAGCATGGTCTGCGCCACAGAATTCTACTGTGTACAGTTGCTAAGCCATGTAGGATCTaGCGCCCCACAGTCACAGCA +
Preference number: 4 (lower is better)
Translates to: DVLIQHGLRHRILLCTVAKPCRI*RPTVTA
Trigger: TGCTGTGACTGTGGGGCGCCAGATCCTACATGGCTT...AGCAACTGTACACAGTAGAATTCTGTGGCGCAGACCATGCTGTATTAACACATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CCA 90 bp CTACTGTGTACAGTTGCTTTCTGTGTGACTCAGGAAGTTCAAGAAGGCAAATTCGATCTGACTGCAAGGTaGAGGGCCGTTTCATCCGGC +
Preference number: 4 (lower is better)
Translates to: LLCTVAFCVTQEVQEGKFDLTAR*RAVSSG
Trigger: GCCGGATGAAACGGCCCTCCACCTTGCAGTCAGATC...GAATTTGCCTTCTTGAACTTCCTGAGTCACACAGAAAGCAACTGTACACAGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CCA 90 bp CTACTGTGTACAGTTGCTTTCTGTGTGACTCAGGAAGTTCAAGAAGGCAAATTCGCCTTTGTTGGTCAGTaGGGTGGACTTGTCAGCCCC +
Preference number: 4 (lower is better)
Translates to: LLCTVAFCVTQEVQEGKFAFVGQ*GGLVSP
Trigger: GGGGCTGACAAGTCCACCCCACTGACCAACAAAGGC...GAATTTGCCTTCTTGAACTTCCTGAGTCACACAGAAAGCAACTGTACACAGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR TCA 90 bp AGAAAGTTCAGAGCTGGGCTATGGACTTCTGAAGCAGCAGTTCACTGGCCGCCTTCTGAATCAGGTTTTTaGAAAGTGCTGTCAACTCCT +
Preference number: 4 (lower is better)
Translates to: RKFRAGLWTSEAAVHWPPSESGF*KVLSTP
Trigger: AGGAGTTGACAGCACTTTTCAAAAACCTGATTCAGA...AGGCGGCCAGTGAACTGCTGCTTCAGAAGTCCATAGCCCAGCTCTGAACTTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR TCA 90 bp GATGTGTTAATACAGCATGGTCTGCGCCACAGAATTCTACTGTGTACAGTTGCTCAGCGGAGTCTCTCCTaGCTCGTTTGCTATCTCGAT +
Preference number: 4 (lower is better)
Translates to: DVLIQHGLRHRILLCTVAQRSLS*LVCYLD
Trigger: ATCGAGATAGCAAACGAGTCAGGAGAGACTCCGCTG...AGCAACTGTACACAGTAGAATTCTGTGGCGCAGACCATGCTGTATTAACACATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR TCA 90 bp AACACATTTTTACCCGGAACTTTGAAAGGTAAAAAGCGATTGCTATACAACATCCCAGCTGGTAGAAGCTaGTGGGCCGGTCTTCCCGCC +
Preference number: 4 (lower is better)
Translates to: NTFLPGTLKGKKRLLYNIPAGRS*WAGLPA
Trigger: GGCGGGAAGACCGGCCCATCAGCTTCTACCAGCTGG...GATGTTGTATAGCAATCGCTTTTTACCTTTCAAAGTTCCGGGTAAAAATGTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR TCA 90 bp GAACCTGACAGATTAGTTTGGGACTGGAGTTCTAATGTTGATATGAATCAACTTCCTCCCCGTCCACGATaGTCACATCCCCCTCGGAGA +
Preference number: 4 (lower is better)
Translates to: EPDRLVWDWSSNVDMNQLPPRPR*SHPPRR
Trigger: TCTCCGAGGGGGATGTGATCATCGTGGACGGGGAGG...AAGTTGATTCATATCAACATTAGAACTCCAGTCCCAAACTAATCTGTCAGGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR TCA 90 bp AGAAAGTTCAGAGCTGGGCTATGGACTTCTGAAGCAGCAGTTCACTGGCCGCCTCATACAAACAGTTCATaGAACTGGTTATCTGGCAAG +
Preference number: 4 (lower is better)
Translates to: RKFRAGLWTSEAAVHWPPHTNSS*NWLSGK
Trigger: CTTGCCAGATAACCAGTTTCATGAACTGTTTGTATG...AGGCGGCCAGTGAACTGCTGCTTCAGAAGTCCATAGCCCAGCTCTGAACTTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR TCA 90 bp AGAAAGTTCAGAGCTGGGCTATGGACTTCTGAAGCAGCAGTTCACTGGCCGCCTTTTTACCCGGAACTTTaGAAGGTAAAAAGCGATTGC +
Preference number: 4 (lower is better)
Translates to: RKFRAGLWTSEAAVHWPPFYPEL*KVKSDC
Trigger: GCAATCGCTTTTTACCTTTCAAAGTTCCGGGTAAAA...AGGCGGCCAGTGAACTGCTGCTTCAGAAGTCCATAGCCCAGCTCTGAACTTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR TCA 90 bp ACAGCATGGTCTGCGCCACAGAATTCTACTGTGTACAGTTGCTTTCTGTGTGACCCATCATCCCAGATCTaGTGGAGAATGGCATGCAAA +
Preference number: 4 (lower is better)
Translates to: TAWSAPQNSTVYSCFLCDPSSQI*WRMACK
Trigger: TTTGCATGCCATTCTCCATCAGATCTGGGATGATGG...GTCACACAGAAAGCAACTGTACACAGTAGAATTCTGTGGCGCAGACCATGCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR GCA 90 bp GCTGGGCTATGGACTTCTGAAGCAGCAGTTCACTGGCCGCCTAAAATAATAATTGGCATGAAAGCCCTCTaGTTCTCCTTGGCAAGGTTT +
Preference number: 4 (lower is better)
Translates to: AGLWTSEAAVHWPPKIIIGMKAL*FSLARF
Trigger: AAACCTTGCCAAGGAGAAGCAGAGGGCTTTCATGCC...AATTATTATTTTAGGCGGCCAGTGAACTGCTGCTTCAGAAGTCCATAGCCCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR GCA 90 bp AGAAAGTTCAGAGCTGGGCTATGGACTTCTGAAGCAGCAGTTCACTGGCCGCCTGCTGCTTCAATCAAATaGACCATCACAACAAATGCA +
Preference number: 4 (lower is better)
Translates to: RKFRAGLWTSEAAVHWPPAASIK*TITTNA
Trigger: TGCATTTGTTGTGATGGTGCATTTGATTGAAGCAGC...AGGCGGCCAGTGAACTGCTGCTTCAGAAGTCCATAGCCCAGCTCTGAACTTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CCA 90 bp AACACATTTTTACCCGGAACTTTGAAAGGTAAAAAGCGATTGCTATACAACATCTCCGACACGGAGATCTaGTCCGGCATCGCCTCGGCG +
Preference number: 4 (lower is better)
Translates to: NTFLPGTLKGKKRLLYNISDTEI*SGIASA
Trigger: CGCCGAGGCGATGCCGGACCAGATCTCCGTGTCGGA...GATGTTGTATAGCAATCGCTTTTTACCTTTCAAAGTTCCGGGTAAAAATGTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CCA 90 bp CGCCACAGAATTCTACTGTGTACAGTTGCTTTCTGTGTGACTCAGGAAGTTCAACTTCCAGATAAGGCTTaGGTCAGCAGCTCCTCACAG +
Preference number: 4 (lower is better)
Translates to: RHRILLCTVAFCVTQEVQLPDKA*VSSSSQ
Trigger: CTGTGAGGAGCTGCTGACCCAAGCCTTATCTGGAAG...TTGAACTTCCTGAGTCACACAGAAAGCAACTGTACACAGTAGAATTCTGTGGCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CCA 90 bp GATGTGTTAATACAGCATGGTCTGCGCCACAGAATTCTACTGTGTACAGTTGCTCCCTCTGCTTCTCCTTaGCAAGGTTTGCAGCATCTC +
Preference number: 4 (lower is better)
Translates to: DVLIQHGLRHRILLCTVAPSASP*QGLQHL
Trigger: GAGATGCTGCAAACCTTGCCAAGGAGAAGCAGAGGG...AGCAACTGTACACAGTAGAATTCTGTGGCGCAGACCATGCTGTATTAACACATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CCA 90 bp GAACCTGACAGATTAGTTTGGGACTGGAGTTCTAATGTTGATATGAATCAACTTCCAATCCACCACTCCTaGTCCTCCTCCCCGTCCACG +
Preference number: 4 (lower is better)
Translates to: EPDRLVWDWSSNVDMNQLPIHHS*SSSPST
Trigger: CGTGGACGGGGAGGAGGACCAGGAGTGGTGGATTGG...AAGTTGATTCATATCAACATTAGAACTCCAGTCCCAAACTAATCTGTCAGGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CCA 90 bp GATGTGTTAATACAGCATGGTCTGCGCCACAGAATTCTACTGTGTACAGTTGCTCACCAACTCCAGAACTaGGCCAAGGAATGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: DVLIQHGLRHRILLCTVAHQLQN*AKECRK
Trigger: CTTCCTGCATTCCTTGGCCCAGTTCTGGAGTTGGTG...AGCAACTGTACACAGTAGAATTCTGTGGCGCAGACCATGCTGTATTAACACATC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CCA 90 bp GGCATTAGAGAACATGGGCTGCCATACAAACAGTTCATGAAACTGGTTATCTGGCACCAACTCCAGAACTaGGCCAAGGAATGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: GIREHGLPYKQFMKLVIWHQLQN*AKECRK
Trigger: CTTCCTGCATTCCTTGGCCCAGTTCTGGAGTTGGTG...CCAGATAACCAGTTTCATGAACTGTTTGTATGGCAGCCCATGTTCTCTAATGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR TCA 90 bp GGCATTAGAGAACATGGGCTGCCATACAAACAGTTCATGAAACTGGTTATCTGGCCAGCCCAGAGCTGTTaGTTGCTTTCACGGATTTCT +
Preference number: 4 (lower is better)
Translates to: GIREHGLPYKQFMKLVIWPAQSC*LLSRIS
Trigger: AGAAATCCGTGAAAGCAATCAACAGCTCTGGGCTGG...CCAGATAACCAGTTTCATGAACTGTTTGTATGGCAGCCCATGTTCTCTAATGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR TCA 90 bp CGCCACAGAATTCTACTGTGTACAGTTGCTTTCTGTGTGACTCAGGAAGTTCAAGCCTGTTTGATCGTGTaGAGATCCGTAGACAGCGTT +
Preference number: 4 (lower is better)
Translates to: RHRILLCTVAFCVTQEVQACLIV*RSVDSV
Trigger: AACGCTGTCTACGGATCTTCACACGATCAAACAGGC...TTGAACTTCCTGAGTCACACAGAAAGCAACTGTACACAGTAGAATTCTGTGGCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR TCA 90 bp GCTGGGCTATGGACTTCTGAAGCAGCAGTTCACTGGCCGCCTAAAATAATAATTCATCCTCTGCACTTCTaGGATGATCTCCTTTGTCAG +
Preference number: 4 (lower is better)
Translates to: AGLWTSEAAVHWPPKIIIHPLHF*DDLLCQ
Trigger: CTGACAAAGGAGATCATCTCAGAAGTGCAGAGGATG...AATTATTATTTTAGGCGGCCAGTGAACTGCTGCTTCAGAAGTCCATAGCCCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR TCA 90 bp ACAGCATGGTCTGCGCCACAGAATTCTACTGTGTACAGTTGCTTTCTGTGTGACAAATATCTCTCGTTTTaGCGGCCTCGCAAAGACTGT +
Preference number: 4 (lower is better)
Translates to: TAWSAPQNSTVYSCFLCDKYLSF*RPRKDC
Trigger: ACAGTCTTTGCGAGGCCGTCAAAACGAGAGATATTT...GTCACACAGAAAGCAACTGTACACAGTAGAATTCTGTGGCGCAGACCATGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR TCA 90 bp GAACCTGACAGATTAGTTTGGGACTGGAGTTCTAATGTTGATATGAATCAACTTTTCGATCCACGGATCTaGCTGCAAGGTGGAGGGCCG +
Preference number: 4 (lower is better)
Translates to: EPDRLVWDWSSNVDMNQLFDPRI*LQGGGP
Trigger: CGGCCCTCCACCTTGCAGTCAGATCCGTGGATCGAA...AAGTTGATTCATATCAACATTAGAACTCCAGTCCCAAACTAATCTGTCAGGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR TCA 90 bp AACACATTTTTACCCGGAACTTTGAAAGGTAAAAAGCGATTGCTATACAACATCGACAGCTGGCGGATCTaGCGAAGATCGCTGCCGGCT +
Preference number: 4 (lower is better)
Translates to: NTFLPGTLKGKKRLLYNIDSWRI*RRSLPA
Trigger: AGCCGGCAGCGATCTTCGTCAGATCCGCCAGCTGTC...GATGTTGTATAGCAATCGCTTTTTACCTTTCAAAGTTCCGGGTAAAAATGTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000281419.8
CDS-3UTR GCA 90 bp CGCCACAGAATTCTACTGTGTACAGTTGCTTTCTGTGTGACTCAGGAAGTTCAACTCTGCATACACAGTTaGCGCCAAACTTCTCCAGAG +
Preference number: 4 (lower is better)
Translates to: RHRILLCTVAFCVTQEVQLCIHS*RQTSPE
Trigger: CTCTGGAGAAGTTTGGCGGCAACTGTGTATGCAGAG...TTGAACTTCCTGAGTCACACAGAAAGCAACTGTACACAGTAGAATTCTGTGGCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR GCA 90 bp GCTGGGCTATGGACTTCTGAAGCAGCAGTTCACTGGCCGCCTAAAATAATAATTAATCTGGGTCATCTCTaGATACACAGTTGCCGCCAA +
Preference number: 4 (lower is better)
Translates to: AGLWTSEAAVHWPPKIIINLGHL*IHSCRQ
Trigger: TTGGCGGCAACTGTGTATGCAGAGATGACCCAGATT...AATTATTATTTTAGGCGGCCAGTGAACTGCTGCTTCAGAAGTCCATAGCCCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR GCA 90 bp GCTGGGCTATGGACTTCTGAAGCAGCAGTTCACTGGCCGCCTAAAATAATAATTGATGTAGTCCTTTCTTaGATTCATGTCGCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: AGLWTSEAAVHWPPKIIIDVVLS*IHVAAW
Trigger: CCAGGCAGCGACATGAATGCAAGAAAGGACTACATC...AATTATTATTTTAGGCGGCCAGTGAACTGCTGCTTCAGAAGTCCATAGCCCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR GCA 90 bp GGCATTAGAGAACATGGGCTGCCATACAAACAGTTCATGAAACTGGTTATCTGGCTCCTTGGCAAGGTTTaGAGCATCTCTGGCCAAAGA +
Preference number: 4 (lower is better)
Translates to: GIREHGLPYKQFMKLVIWLLGKV*SISGQR
Trigger: TCTTTGGCCAGAGATGCTGCAAACCTTGCCAAGGAG...CCAGATAACCAGTTTCATGAACTGTTTGTATGGCAGCCCATGTTCTCTAATGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CCA 90 bp GGCATTAGAGAACATGGGCTGCCATACAAACAGTTCATGAAACTGGTTATCTGGGTCCGAATCATCCCATaGAGCTTGGCGTGTTCCTTT +
Preference number: 4 (lower is better)
Translates to: GIREHGLPYKQFMKLVIWVRIIP*SLACSF
Trigger: AAAGGAACACGCCAAGCTCCATGGGATGATTCGGAC...CCAGATAACCAGTTTCATGAACTGTTTGTATGGCAGCCCATGTTCTCTAATGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CCA 90 bp CTACTGTGTACAGTTGCTTTCTGTGTGACTCAGGAAGTTCAAGAAGGCAAATTCCTTCCAGATAAGGCTTaGGTCAGCAGCTCCTCACAG +
Preference number: 4 (lower is better)
Translates to: LLCTVAFCVTQEVQEGKFLPDKA*VSSSSQ
Trigger: CTGTGAGGAGCTGCTGACCCAAGCCTTATCTGGAAG...GAATTTGCCTTCTTGAACTTCCTGAGTCACACAGAAAGCAACTGTACACAGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CCA 90 bp AACACATTTTTACCCGGAACTTTGAAAGGTAAAAAGCGATTGCTATACAACATCCCAATCCACCACTCCTaGTCCTCCTCCCCGTCCACG +
Preference number: 4 (lower is better)
Translates to: NTFLPGTLKGKKRLLYNIPIHHS*SSSPST
Trigger: CGTGGACGGGGAGGAGGACCAGGAGTGGTGGATTGG...GATGTTGTATAGCAATCGCTTTTTACCTTTCAAAGTTCCGGGTAAAAATGTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR TCA 90 bp CTACTGTGTACAGTTGCTTTCTGTGTGACTCAGGAAGTTCAAGAAGGCAAATTCCCAGCCCAGAGCTGTTaGTTGCTTTCACGGATTTCT +
Preference number: 4 (lower is better)
Translates to: LLCTVAFCVTQEVQEGKFPAQSC*LLSRIS
Trigger: AGAAATCCGTGAAAGCAATCAACAGCTCTGGGCTGG...GAATTTGCCTTCTTGAACTTCCTGAGTCACACAGAAAGCAACTGTACACAGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR TCA 90 bp CGCCACAGAATTCTACTGTGTACAGTTGCTTTCTGTGTGACTCAGGAAGTTCAACATCCTCTGCACTTCTaGGATGATCTCCTTTGTCAG +
Preference number: 4 (lower is better)
Translates to: RHRILLCTVAFCVTQEVQHPLHF*DDLLCQ
Trigger: CTGACAAAGGAGATCATCTCAGAAGTGCAGAGGATG...TTGAACTTCCTGAGTCACACAGAAAGCAACTGTACACAGTAGAATTCTGTGGCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR TCA 90 bp ACTTTTGTTAAAAGTCCAAGTGGGTATCATATGCCTATTTATTCTCAGAGTGCCCACAGTGCTCGTGCTTaGGGCGCTTGGCAATGTCCA +
Preference number: 4 (lower is better)
Translates to: TFVKSPSGYHMPIYSQSAHSARA*GAWQCP
Trigger: TGGACATTGCCAAGCGCCTCAAGCACGAGCACTGTG...GGCACTCTGAGAATAAATAGGCATATGATACCCACTTGGACTTTTAACAAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR TCA 90 bp ACAGCATGGTCTGCGCCACAGAATTCTACTGTGTACAGTTGCTTTCTGTGTGACGTAGGAAACAGCAAGTaGTGTGTTAATACAGCATGG +
Preference number: 4 (lower is better)
Translates to: TAWSAPQNSTVYSCFLCDVGNSK*CVNTAW
Trigger: CCATGCTGTATTAACACATCACTTGCTGTTTCCTAC...GTCACACAGAAAGCAACTGTACACAGTAGAATTCTGTGGCGCAGACCATGCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR TCA 90 bp GGCATTAGAGAACATGGGCTGCCATACAAACAGTTCATGAAACTGGTTATCTGGCCATCATCCCAGATCTaGTGGAGAATGGCATGCAAA +
Preference number: 4 (lower is better)
Translates to: GIREHGLPYKQFMKLVIWPSSQI*WRMACK
Trigger: TTTGCATGCCATTCTCCATCAGATCTGGGATGATGG...CCAGATAACCAGTTTCATGAACTGTTTGTATGGCAGCCCATGTTCTCTAATGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR TCA 90 bp GGCATTAGAGAACATGGGCTGCCATACAAACAGTTCATGAAACTGGTTATCTGGTCTGTGTACATGTTCTaGGCCATCATCCCAGATCTG +
Preference number: 4 (lower is better)
Translates to: GIREHGLPYKQFMKLVIWSVYMF*AIIPDL
Trigger: CAGATCTGGGATGATGGCTCAGAACATGTACACAGA...CCAGATAACCAGTTTCATGAACTGTTTGTATGGCAGCCCATGTTCTCTAATGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR GCA 90 bp GATGTGTTAATACAGCATGGTCTGCGCCACAGAATTCTACTGTGTACAGTTGCTAATCTGGGTCATCTCTaGATACACAGTTGCCGCCAA +
Preference number: 4 (lower is better)
Translates to: DVLIQHGLRHRILLCTVANLGHL*IHSCRQ
Trigger: TTGGCGGCAACTGTGTATGCAGAGATGACCCAGATT...AGCAACTGTACACAGTAGAATTCTGTGGCGCAGACCATGCTGTATTAACACATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR GCA 90 bp CTACTGTGTACAGTTGCTTTCTGTGTGACTCAGGAAGTTCAAGAAGGCAAATTCTTGCCCGTCATCCTCTaGACTTCTGAGATGATCTCC +
Preference number: 4 (lower is better)
Translates to: LLCTVAFCVTQEVQEGKFLPVIL*TSEMIS
Trigger: GGAGATCATCTCAGAAGTGCAGAGGATGACGGGCAA...GAATTTGCCTTCTTGAACTTCCTGAGTCACACAGAAAGCAACTGTACACAGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR GCA 90 bp ACTTTTGTTAAAAGTCCAAGTGGGTATCATATGCCTATTTATTCTCAGAGTGCCCGATGCAGGTCAGGATaGCCAGGTTGGTGGAAAGCC +
Preference number: 4 (lower is better)
Translates to: TFVKSPSGYHMPIYSQSARCRSG*PGWWKA
Trigger: GGCTTTCCACCAACCTGGGCATCCTGACCTGCATCG...GGCACTCTGAGAATAAATAGGCATATGATACCCACTTGGACTTTTAACAAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR GCA 90 bp ACTTTTGTTAAAAGTCCAAGTGGGTATCATATGCCTATTTATTCTCAGAGTGCCAGCAGCTCCTCACAGTaGTCGTGCTTGAGGCGCTTG +
Preference number: 4 (lower is better)
Translates to: TFVKSPSGYHMPIYSQSASSSSQ*SCLRRL
Trigger: CAAGCGCCTCAAGCACGAGCACTGTGAGGAGCTGCT...GGCACTCTGAGAATAAATAGGCATATGATACCCACTTGGACTTTTAACAAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR GCA 90 bp GAACCTGACAGATTAGTTTGGGACTGGAGTTCTAATGTTGATATGAATCAACTTATGGGTGCAGGGGGCTaGAGGACCATAGCATTGGAC +
Preference number: 4 (lower is better)
Translates to: EPDRLVWDWSSNVDMNQLMGAGG*RTIALD
Trigger: GTCCAATGCTATGGTCCTGCAGCCCCCTGCACCCAT...AAGTTGATTCATATCAACATTAGAACTCCAGTCCCAAACTAATCTGTCAGGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR GCA 90 bp CTACTGTGTACAGTTGCTTTCTGTGTGACTCAGGAAGTTCAAGAAGGCAAATTCTTCAACTTGGTTGCCTaGGACTTCCTAGGCATGGGT +
Preference number: 4 (lower is better)
Translates to: LLCTVAFCVTQEVQEGKFFNLVA*DFLGMG
Trigger: ACCCATGCCTAGGAAGTCGCAGGCAACCAAGTTGAA...GAATTTGCCTTCTTGAACTTCCTGAGTCACACAGAAAGCAACTGTACACAGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR GCA 90 bp AGAAAGTTCAGAGCTGGGCTATGGACTTCTGAAGCAGCAGTTCACTGGCCGCCTTGTAAATTTCCAAGTTaGTTTTTAAACACTGGGTGG +
Preference number: 4 (lower is better)
Translates to: RKFRAGLWTSEAAVHWPPCKFPS*FLNTGW
Trigger: CCACCCAGTGTTTAAAAAGCAACTTGGAAATTTACA...AGGCGGCCAGTGAACTGCTGCTTCAGAAGTCCATAGCCCAGCTCTGAACTTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR GCA 90 bp GATGTGTTAATACAGCATGGTCTGCGCCACAGAATTCTACTGTGTACAGTTGCTGAATGGCATGCAAAATaGCAGAATCCTGCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: DVLIQHGLRHRILLCTVAEWHAK*QNPAAA
Trigger: TGCAGCTGCAGGATTCTGGCATTTTGCATGCCATTC...AGCAACTGTACACAGTAGAATTCTGTGGCGCAGACCATGCTGTATTAACACATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR GCA 90 bp AGAAAGTTCAGAGCTGGGCTATGGACTTCTGAAGCAGCAGTTCACTGGCCGCCTCAATATATACAGTTGTaGTGCAACCAAAGTAATCAG +
Preference number: 4 (lower is better)
Translates to: RKFRAGLWTSEAAVHWPPQYIQL*CNQSNQ
Trigger: CTGATTACTTTGGTTGCAGCACAACTGTATATATTG...AGGCGGCCAGTGAACTGCTGCTTCAGAAGTCCATAGCCCAGCTCTGAACTTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CCA 90 bp GATGTGTTAATACAGCATGGTCTGCGCCACAGAATTCTACTGTGTACAGTTGCTCGGTTAGCGGTACCATaGGATATGGTCAGAAAACCA +
Preference number: 4 (lower is better)
Translates to: DVLIQHGLRHRILLCTVARLAVP*DMVRKP
Trigger: TGGTTTTCTGACCATATCCCATGGTACCGCTAACCG...AGCAACTGTACACAGTAGAATTCTGTGGCGCAGACCATGCTGTATTAACACATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CCA 90 bp GGCATTAGAGAACATGGGCTGCCATACAAACAGTTCATGAAACTGGTTATCTGGCGGTTAGCGGTACCATaGGATATGGTCAGAAAACCA +
Preference number: 4 (lower is better)
Translates to: GIREHGLPYKQFMKLVIWRLAVP*DMVRKP
Trigger: TGGTTTTCTGACCATATCCCATGGTACCGCTAACCG...CCAGATAACCAGTTTCATGAACTGTTTGTATGGCAGCCCATGTTCTCTAATGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CCA 90 bp GGCATTAGAGAACATGGGCTGCCATACAAACAGTTCATGAAACTGGTTATCTGGCATTCCCAATATTCTTaGCGAGCAGCAGCTCAGATG +
Preference number: 4 (lower is better)
Translates to: GIREHGLPYKQFMKLVIWHSQYS*RAAAQM
Trigger: CATCTGAGCTGCTGCTCGCCAAGAATATTGGGAATG...CCAGATAACCAGTTTCATGAACTGTTTGTATGGCAGCCCATGTTCTCTAATGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CCA 90 bp GCTGGGCTATGGACTTCTGAAGCAGCAGTTCACTGGCCGCCTAAAATAATAATTTCATCCAGGTCTTCGTaGAGTAGTCGCCATTCATAT +
Preference number: 4 (lower is better)
Translates to: AGLWTSEAAVHWPPKIIISSRSS*SSRHSY
Trigger: ATATGAATGGCGACTACTCCACGAAGACCTGGATGA...AATTATTATTTTAGGCGGCCAGTGAACTGCTGCTTCAGAAGTCCATAGCCCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CCA 90 bp GAACCTGACAGATTAGTTTGGGACTGGAGTTCTAATGTTGATATGAATCAACTTAGGCTTCCATTACGCTaGGCGTCTTGGCAACGGGTG +
Preference number: 4 (lower is better)
Translates to: EPDRLVWDWSSNVDMNQLRLPLR*ASWQRV
Trigger: CACCCGTTGCCAAGACGCCCAGCGTAATGGAAGCCT...AAGTTGATTCATATCAACATTAGAACTCCAGTCCCAAACTAATCTGTCAGGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CCA 90 bp ACTTTTGTTAAAAGTCCAAGTGGGTATCATATGCCTATTTATTCTCAGAGTGCCGCAGGCTTGCTCGGCTaGCTCAAGGCTTCCATTACG +
Preference number: 4 (lower is better)
Translates to: TFVKSPSGYHMPIYSQSAAGLLG*LKASIT
Trigger: CGTAATGGAAGCCTTGAGCCAGCCGAGCAAGCCTGC...GGCACTCTGAGAATAAATAGGCATATGATACCCACTTGGACTTTTAACAAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CCA 90 bp ACTTTTGTTAAAAGTCCAAGTGGGTATCATATGCCTATTTATTCTCAGAGTGCCGCCTTTGTTGGTCAGTaGGGTGGACTTGTCAGCCCC +
Preference number: 4 (lower is better)
Translates to: TFVKSPSGYHMPIYSQSAAFVGQ*GGLVSP
Trigger: GGGGCTGACAAGTCCACCCCACTGACCAACAAAGGC...GGCACTCTGAGAATAAATAGGCATATGATACCCACTTGGACTTTTAACAAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CCA 90 bp AGAAAGTTCAGAGCTGGGCTATGGACTTCTGAAGCAGCAGTTCACTGGCCGCCTAGATTAGTTTGGGACTaGAGTTCTAATGTTGATATG +
Preference number: 4 (lower is better)
Translates to: RKFRAGLWTSEAAVHWPPRLVWD*SSNVDM
Trigger: CATATCAACATTAGAACTCCAGTCCCAAACTAATCT...AGGCGGCCAGTGAACTGCTGCTTCAGAAGTCCATAGCCCAGCTCTGAACTTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR TCA 90 bp ACAGCATGGTCTGCGCCACAGAATTCTACTGTGTACAGTTGCTTTCTGTGTGACGTAAGTTCTGTCATGTaGAATGAGGTCAAAGCACTT +
Preference number: 4 (lower is better)
Translates to: TAWSAPQNSTVYSCFLCDVSSVM*NEVKAL
Trigger: AAGTGCTTTGACCTCATTTCACATGACAGAACTTAC...GTCACACAGAAAGCAACTGTACACAGTAGAATTCTGTGGCGCAGACCATGCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR TCA 90 bp GAACCTGACAGATTAGTTTGGGACTGGAGTTCTAATGTTGATATGAATCAACTTTGCCTGGGTTGGGTTTaGCTGAGTCCTCAGCTGGTA +
Preference number: 4 (lower is better)
Translates to: EPDRLVWDWSSNVDMNQLCLGWV*LSPQLV
Trigger: TACCAGCTGAGGACTCAGTCAAACCCAACCCAGGCA...AAGTTGATTCATATCAACATTAGAACTCCAGTCCCAAACTAATCTGTCAGGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR TCA 90 bp AACACATTTTTACCCGGAACTTTGAAAGGTAAAAAGCGATTGCTATACAACATCCACAGTGCTCGTGCTTaGGGCGCTTGGCAATGTCCA +
Preference number: 4 (lower is better)
Translates to: NTFLPGTLKGKKRLLYNIHSARA*GAWQCP
Trigger: TGGACATTGCCAAGCGCCTCAAGCACGAGCACTGTG...GATGTTGTATAGCAATCGCTTTTTACCTTTCAAAGTTCCGGGTAAAAATGTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR TCA 90 bp ACTTTTGTTAAAAGTCCAAGTGGGTATCATATGCCTATTTATTCTCAGAGTGCCGATACAGCGTTAGACTaGAGCTGGTTGGAGCCCAGC +
Preference number: 4 (lower is better)
Translates to: TFVKSPSGYHMPIYSQSADTALD*SWLEPS
Trigger: GCTGGGCTCCAACCAGCTTCAGTCTAACGCTGTATC...GGCACTCTGAGAATAAATAGGCATATGATACCCACTTGGACTTTTAACAAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR TCA 90 bp ACAGCATGGTCTGCGCCACAGAATTCTACTGTGTACAGTTGCTTTCTGTGTGACCATACAAACAGTTCATaGAACTGGTTATCTGGCAAG +
Preference number: 4 (lower is better)
Translates to: TAWSAPQNSTVYSCFLCDHTNSS*NWLSGK
Trigger: CTTGCCAGATAACCAGTTTCATGAACTGTTTGTATG...GTCACACAGAAAGCAACTGTACACAGTAGAATTCTGTGGCGCAGACCATGCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR TCA 90 bp GCTGGGCTATGGACTTCTGAAGCAGCAGTTCACTGGCCGCCTAAAATAATAATTTACAAGACACTAAACTaGGTAAACATTCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: AGLWTSEAAVHWPPKIIIYKTLN*VNILLG
Trigger: GCCCAGGAGAATGTTTACTCAGTTTAGTGTCTTGTA...AATTATTATTTTAGGCGGCCAGTGAACTGCTGCTTCAGAAGTCCATAGCCCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR GCA 90 bp GATGTGTTAATACAGCATGGTCTGCGCCACAGAATTCTACTGTGTACAGTTGCTCGAAGCTGTATCAACTaGCTTCTTTCTTCATCCTGG +
Preference number: 4 (lower is better)
Translates to: DVLIQHGLRHRILLCTVARSCIN*LLSSSW
Trigger: CCAGGATGAAGAAAGAAGGCAGTTGATACAGCTTCG...AGCAACTGTACACAGTAGAATTCTGTGGCGCAGACCATGCTGTATTAACACATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR GCA 90 bp GGCATTAGAGAACATGGGCTGCCATACAAACAGTTCATGAAACTGGTTATCTGGCGAAGCTGTATCAACTaGCTTCTTTCTTCATCCTGG +
Preference number: 4 (lower is better)
Translates to: GIREHGLPYKQFMKLVIWRSCIN*LLSSSW
Trigger: CCAGGATGAAGAAAGAAGGCAGTTGATACAGCTTCG...CCAGATAACCAGTTTCATGAACTGTTTGTATGGCAGCCCATGTTCTCTAATGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR GCA 90 bp GAACCTGACAGATTAGTTTGGGACTGGAGTTCTAATGTTGATATGAATCAACTTGCCGCGTTATCCGCGTaGTTCTTCCTTGCGTATCTC +
Preference number: 4 (lower is better)
Translates to: EPDRLVWDWSSNVDMNQLAALSA*FFLAYL
Trigger: GAGATACGCAAGGAAGAAGCACGCGGATAACGCGGC...AAGTTGATTCATATCAACATTAGAACTCCAGTCCCAAACTAATCTGTCAGGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR GCA 90 bp AACACATTTTTACCCGGAACTTTGAAAGGTAAAAAGCGATTGCTATACAACATCATGGGTGCAGGGGGCTaGAGGACCATAGCATTGGAC +
Preference number: 4 (lower is better)
Translates to: NTFLPGTLKGKKRLLYNIMGAGG*RTIALD
Trigger: GTCCAATGCTATGGTCCTGCAGCCCCCTGCACCCAT...GATGTTGTATAGCAATCGCTTTTTACCTTTCAAAGTTCCGGGTAAAAATGTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CCA 90 bp GAACCTGACAGATTAGTTTGGGACTGGAGTTCTAATGTTGATATGAATCAACTTAAGCCATGTAGGATCTaGCGCCCCACAGTCACAGCA +
Preference number: 4 (lower is better)
Translates to: EPDRLVWDWSSNVDMNQLKPCRI*RPTVTA
Trigger: TGCTGTGACTGTGGGGCGCCAGATCCTACATGGCTT...AAGTTGATTCATATCAACATTAGAACTCCAGTCCCAAACTAATCTGTCAGGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CCA 90 bp GAACCTGACAGATTAGTTTGGGACTGGAGTTCTAATGTTGATATGAATCAACTTACAGGTCCTCTCGGTTaGCCTTTGTTGGTCAGTGGG +
Preference number: 4 (lower is better)
Translates to: EPDRLVWDWSSNVDMNQLTGPLG*PLLVSG
Trigger: CCCACTGACCAACAAAGGCCAACCGAGAGGACCTGT...AAGTTGATTCATATCAACATTAGAACTCCAGTCCCAAACTAATCTGTCAGGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR TCA 90 bp GCTGGGCTATGGACTTCTGAAGCAGCAGTTCACTGGCCGCCTAAAATAATAATTTTCTGTCATGTGAAATaGGGTCAAAGCACTTCTTCT +
Preference number: 4 (lower is better)
Translates to: AGLWTSEAAVHWPPKIIIFCHVK*GQSTSS
Trigger: AGAAGAAGTGCTTTGACCTCATTTCACATGACAGAA...AATTATTATTTTAGGCGGCCAGTGAACTGCTGCTTCAGAAGTCCATAGCCCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR TCA 90 bp ACAGCATGGTCTGCGCCACAGAATTCTACTGTGTACAGTTGCTTTCTGTGTGACACAGACATCCATATTTaGCATTCCTGTTCATCTTCA +
Preference number: 4 (lower is better)
Translates to: TAWSAPQNSTVYSCFLCDTDIHI*HSCSSS
Trigger: TGAAGATGAACAGGAATGTCAAATATGGATGTCTGT...GTCACACAGAAAGCAACTGTACACAGTAGAATTCTGTGGCGCAGACCATGCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR TCA 90 bp AACACATTTTTACCCGGAACTTTGAAAGGTAAAAAGCGATTGCTATACAACATCGCAAGATGCTGGGCATaGAAGCCCTCTGCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: NTFLPGTLKGKKRLLYNIARCWA*KPSASP
Trigger: AGGAGAAGCAGAGGGCTTTCATGCCCAGCATCTTGC...GATGTTGTATAGCAATCGCTTTTTACCTTTCAAAGTTCCGGGTAAAAATGTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR TCA 90 bp GGCATTAGAGAACATGGGCTGCCATACAAACAGTTCATGAAACTGGTTATCTGGAATTTCAAGACAGTGTaGCTACCATTCCTGTTGGAG +
Preference number: 4 (lower is better)
Translates to: GIREHGLPYKQFMKLVIWNFKTV*LPFLLE
Trigger: CTCCAACAGGAATGGTAGTCACACTGTCTTGAAATT...CCAGATAACCAGTTTCATGAACTGTTTGTATGGCAGCCCATGTTCTCTAATGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR TCA 90 bp GATGTGTTAATACAGCATGGTCTGCGCCACAGAATTCTACTGTGTACAGTTGCTAATTTCAAGACAGTGTaGCTACCATTCCTGTTGGAG +
Preference number: 4 (lower is better)
Translates to: DVLIQHGLRHRILLCTVANFKTV*LPFLLE
Trigger: CTCCAACAGGAATGGTAGTCACACTGTCTTGAAATT...AGCAACTGTACACAGTAGAATTCTGTGGCGCAGACCATGCTGTATTAACACATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR TCA 90 bp ACAGCATGGTCTGCGCCACAGAATTCTACTGTGTACAGTTGCTTTCTGTGTGACAATGATATGATGGCCTaGAACAGTAAAAAGTGGGAT +
Preference number: 4 (lower is better)
Translates to: TAWSAPQNSTVYSCFLCDNDMMA*NSKKWD
Trigger: ATCCCACTTTTTACTGTTTCAGGCCATCATATCATT...GTCACACAGAAAGCAACTGTACACAGTAGAATTCTGTGGCGCAGACCATGCTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR GCA 90 bp AACACATTTTTACCCGGAACTTTGAAAGGTAAAAAGCGATTGCTATACAACATCTCTTCTTGTAGAGGCTaGCGTTCCGCTCGGTCCCAT +
Preference number: 4 (lower is better)
Translates to: NTFLPGTLKGKKRLLYNISSCRG*RSARSH
Trigger: ATGGGACCGAGCGGAACGGCAGCCTCTACAAGAAGA...GATGTTGTATAGCAATCGCTTTTTACCTTTCAAAGTTCCGGGTAAAAATGTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR GCA 90 bp GAACCTGACAGATTAGTTTGGGACTGGAGTTCTAATGTTGATATGAATCAACTTAGTAGTGCAGGGCTGTaGTGCCTTTCCCTGTCTGTT +
Preference number: 4 (lower is better)
Translates to: EPDRLVWDWSSNVDMNQLSSAGL*CLSLSV
Trigger: AACAGACAGGGAAAGGCAGCACAGCCCTGCACTACT...AAGTTGATTCATATCAACATTAGAACTCCAGTCCCAAACTAATCTGTCAGGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR GCA 90 bp ACAGCATGGTCTGCGCCACAGAATTCTACTGTGTACAGTTGCTTTCTGTGTGACAACTCTACACAGTCTTaGATAATAAAGACAAGCTGC +
Preference number: 4 (lower is better)
Translates to: TAWSAPQNSTVYSCFLCDNSTQS*IIKTSC
Trigger: GCAGCTTGTCTTTATTATGCAAGACTGTGTAGAGTT...GTCACACAGAAAGCAACTGTACACAGTAGAATTCTGTGGCGCAGACCATGCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR GCA 90 bp ACAGCATGGTCTGCGCCACAGAATTCTACTGTGTACAGTTGCTTTCTGTGTGACTATATACAGTTGTGCTaGAACCAAAGTAATCAGGTG +
Preference number: 4 (lower is better)
Translates to: TAWSAPQNSTVYSCFLCDYIQLC*NQSNQV
Trigger: CACCTGATTACTTTGGTTGCAGCACAACTGTATATA...GTCACACAGAAAGCAACTGTACACAGTAGAATTCTGTGGCGCAGACCATGCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CCA 90 bp CTACTGTGTACAGTTGCTTTCTGTGTGACTCAGGAAGTTCAAGAAGGCAAATTCTCATCCAGGTCTTCGTaGAGTAGTCGCCATTCATAT +
Preference number: 4 (lower is better)
Translates to: LLCTVAFCVTQEVQEGKFSSRSS*SSRHSY
Trigger: ATATGAATGGCGACTACTCCACGAAGACCTGGATGA...GAATTTGCCTTCTTGAACTTCCTGAGTCACACAGAAAGCAACTGTACACAGTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CCA 90 bp GAACCTGACAGATTAGTTTGGGACTGGAGTTCTAATGTTGATATGAATCAACTTCCCTCTGCTTCTCCTTaGCAAGGTTTGCAGCATCTC +
Preference number: 4 (lower is better)
Translates to: EPDRLVWDWSSNVDMNQLPSASP*QGLQHL
Trigger: GAGATGCTGCAAACCTTGCCAAGGAGAAGCAGAGGG...AAGTTGATTCATATCAACATTAGAACTCCAGTCCCAAACTAATCTGTCAGGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CCA 90 bp GAACCTGACAGATTAGTTTGGGACTGGAGTTCTAATGTTGATATGAATCAACTTTCGGTTGGCCTTTGTTaGTCAGTGGGGTGGACTTGT +
Preference number: 4 (lower is better)
Translates to: EPDRLVWDWSSNVDMNQLSVGLC*SVGWTC
Trigger: ACAAGTCCACCCCACTGACCAACAAAGGCCAACCGA...AAGTTGATTCATATCAACATTAGAACTCCAGTCCCAAACTAATCTGTCAGGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CCA 90 bp AACACATTTTTACCCGGAACTTTGAAAGGTAAAAAGCGATTGCTATACAACATCACAGGTCCTCTCGGTTaGCCTTTGTTGGTCAGTGGG +
Preference number: 4 (lower is better)
Translates to: NTFLPGTLKGKKRLLYNITGPLG*PLLVSG
Trigger: CCCACTGACCAACAAAGGCCAACCGAGAGGACCTGT...GATGTTGTATAGCAATCGCTTTTTACCTTTCAAAGTTCCGGGTAAAAATGTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CCA 90 bp GGCATTAGAGAACATGGGCTGCCATACAAACAGTTCATGAAACTGGTTATCTGGTGTGTTAATACAGCATaGTCTGCGCCACAGAATTCT +
Preference number: 4 (lower is better)
Translates to: GIREHGLPYKQFMKLVIWCVNTA*SAPQNS
Trigger: AGAATTCTGTGGCGCAGACCATGCTGTATTAACACA...CCAGATAACCAGTTTCATGAACTGTTTGTATGGCAGCCCATGTTCTCTAATGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CCA 90 bp GATGTGTTAATACAGCATGGTCTGCGCCACAGAATTCTACTGTGTACAGTTGCTTGTGTTAATACAGCATaGTCTGCGCCACAGAATTCT +
Preference number: 4 (lower is better)
Translates to: DVLIQHGLRHRILLCTVACVNTA*SAPQNS
Trigger: AGAATTCTGTGGCGCAGACCATGCTGTATTAACACA...AGCAACTGTACACAGTAGAATTCTGTGGCGCAGACCATGCTGTATTAACACATC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CCA 90 bp GATGTGTTAATACAGCATGGTCTGCGCCACAGAATTCTACTGTGTACAGTTGCTTATTCCTTATATAGCTaGCACCAGGTGGTCAAAAGG +
Preference number: 4 (lower is better)
Translates to: DVLIQHGLRHRILLCTVAYSLYS*HQVVKR
Trigger: CCTTTTGACCACCTGGTGCCAGCTATATAAGGAATA...AGCAACTGTACACAGTAGAATTCTGTGGCGCAGACCATGCTGTATTAACACATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR TCA 90 bp GGCATTAGAGAACATGGGCTGCCATACAAACAGTTCATGAAACTGGTTATCTGGTCTGAATCAGGTTTTTaGAAAGTGCTGTCAACTCCT +
Preference number: 4 (lower is better)
Translates to: GIREHGLPYKQFMKLVIWSESGF*KVLSTP
Trigger: AGGAGTTGACAGCACTTTTCAAAAACCTGATTCAGA...CCAGATAACCAGTTTCATGAACTGTTTGTATGGCAGCCCATGTTCTCTAATGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR TCA 90 bp CTACTGTGTACAGTTGCTTTCTGTGTGACTCAGGAAGTTCAAGAAGGCAAATTCTCTGCACTTCTGAGATaGTCTCCTTTGTCAGTTCTT +
Preference number: 4 (lower is better)
Translates to: LLCTVAFCVTQEVQEGKFSALLR*SPLSVL
Trigger: AAGAACTGACAAAGGAGATCATCTCAGAAGTGCAGA...GAATTTGCCTTCTTGAACTTCCTGAGTCACACAGAAAGCAACTGTACACAGTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR TCA 90 bp CTACTGTGTACAGTTGCTTTCTGTGTGACTCAGGAAGTTCAAGAAGGCAAATTCAAAAAGTCTACAATGTaGAGAGAGGTTCGATCCACG +
Preference number: 4 (lower is better)
Translates to: LLCTVAFCVTQEVQEGKFKKSTM*REVRST
Trigger: CGTGGATCGAACCTCTCTTCACATTGTAGACTTTTT...GAATTTGCCTTCTTGAACTTCCTGAGTCACACAGAAAGCAACTGTACACAGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR GCA 90 bp ACTTTTGTTAAAAGTCCAAGTGGGTATCATATGCCTATTTATTCTCAGAGTGCCCTCCTTGGCAAGGTTTaGAGCATCTCTGGCCAAAGA +
Preference number: 4 (lower is better)
Translates to: TFVKSPSGYHMPIYSQSALLGKV*SISGQR
Trigger: TCTTTGGCCAGAGATGCTGCAAACCTTGCCAAGGAG...GGCACTCTGAGAATAAATAGGCATATGATACCCACTTGGACTTTTAACAAAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR GCA 90 bp GAACCTGACAGATTAGTTTGGGACTGGAGTTCTAATGTTGATATGAATCAACTTGGCATGAAAGCCCTCTaGTTCTCCTTGGCAAGGTTT +
Preference number: 4 (lower is better)
Translates to: EPDRLVWDWSSNVDMNQLGMKAL*FSLARF
Trigger: AAACCTTGCCAAGGAGAAGCAGAGGGCTTTCATGCC...AAGTTGATTCATATCAACATTAGAACTCCAGTCCCAAACTAATCTGTCAGGTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR GCA 90 bp GAACCTGACAGATTAGTTTGGGACTGGAGTTCTAATGTTGATATGAATCAACTTTTCAACTTGGTTGCCTaGGACTTCCTAGGCATGGGT +
Preference number: 4 (lower is better)
Translates to: EPDRLVWDWSSNVDMNQLFNLVA*DFLGMG
Trigger: ACCCATGCCTAGGAAGTCGCAGGCAACCAAGTTGAA...AAGTTGATTCATATCAACATTAGAACTCCAGTCCCAAACTAATCTGTCAGGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR GCA 90 bp GCTGGGCTATGGACTTCTGAAGCAGCAGTTCACTGGCCGCCTAAAATAATAATTAACTCTACACAGTCTTaGATAATAAAGACAAGCTGC +
Preference number: 4 (lower is better)
Translates to: AGLWTSEAAVHWPPKIIINSTQS*IIKTSC
Trigger: GCAGCTTGTCTTTATTATGCAAGACTGTGTAGAGTT...AATTATTATTTTAGGCGGCCAGTGAACTGCTGCTTCAGAAGTCCATAGCCCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR GCA 90 bp GCTGGGCTATGGACTTCTGAAGCAGCAGTTCACTGGCCGCCTAAAATAATAATTAATAGCATCCTAAGCTaGATATTATGTTATCCACCC +
Preference number: 4 (lower is better)
Translates to: AGLWTSEAAVHWPPKIIINSILS*ILCYPP
Trigger: GGGTGGATAACATAATATGCAGCTTAGGATGCTATT...AATTATTATTTTAGGCGGCCAGTGAACTGCTGCTTCAGAAGTCCATAGCCCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR GCA 90 bp ACAGCATGGTCTGCGCCACAGAATTCTACTGTGTACAGTTGCTTTCTGTGTGACCAATATATACAGTTGTaGTGCAACCAAAGTAATCAG +
Preference number: 4 (lower is better)
Translates to: TAWSAPQNSTVYSCFLCDQYIQL*CNQSNQ
Trigger: CTGATTACTTTGGTTGCAGCACAACTGTATATATTG...GTCACACAGAAAGCAACTGTACACAGTAGAATTCTGTGGCGCAGACCATGCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CCA 90 bp AACACATTTTTACCCGGAACTTTGAAAGGTAAAAAGCGATTGCTATACAACATCGGATCTCCATCAATGTaGCCAATCCACCACTCCTGG +
Preference number: 4 (lower is better)
Translates to: NTFLPGTLKGKKRLLYNIGSPSM*PIHHSW
Trigger: CCAGGAGTGGTGGATTGGCCACATTGATGGAGATCC...GATGTTGTATAGCAATCGCTTTTTACCTTTCAAAGTTCCGGGTAAAAATGTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CCA 90 bp CGCCACAGAATTCTACTGTGTACAGTTGCTTTCTGTGTGACTCAGGAAGTTCAACCTGACAGATTAGTTTaGGACTGGAGTTCTAATGTT +
Preference number: 4 (lower is better)
Translates to: RHRILLCTVAFCVTQEVQPDRLV*DWSSNV
Trigger: AACATTAGAACTCCAGTCCCAAACTAATCTGTCAGG...TTGAACTTCCTGAGTCACACAGAAAGCAACTGTACACAGTAGAATTCTGTGGCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR TCA 90 bp CGCCACAGAATTCTACTGTGTACAGTTGCTTTCTGTGTGACTCAGGAAGTTCAAACAGACATCCATATTTaGCATTCCTGTTCATCTTCA +
Preference number: 4 (lower is better)
Translates to: RHRILLCTVAFCVTQEVQTDIHI*HSCSSS
Trigger: TGAAGATGAACAGGAATGTCAAATATGGATGTCTGT...TTGAACTTCCTGAGTCACACAGAAAGCAACTGTACACAGTAGAATTCTGTGGCG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR TCA 90 bp GAACCTGACAGATTAGTTTGGGACTGGAGTTCTAATGTTGATATGAATCAACTTGATAAAGTGCACAAATaGCACCGGGAATGCGCCTTT +
Preference number: 4 (lower is better)
Translates to: EPDRLVWDWSSNVDMNQLDKVHK*HRECAF
Trigger: AAAGGCGCATTCCCGGTGTCATTTGTGCACTTTATC...AAGTTGATTCATATCAACATTAGAACTCCAGTCCCAAACTAATCTGTCAGGTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR TCA 90 bp GATGTGTTAATACAGCATGGTCTGCGCCACAGAATTCTACTGTGTACAGTTGCTAATGATATGATGGCCTaGAACAGTAAAAAGTGGGAT +
Preference number: 4 (lower is better)
Translates to: DVLIQHGLRHRILLCTVANDMMA*NSKKWD
Trigger: ATCCCACTTTTTACTGTTTCAGGCCATCATATCATT...AGCAACTGTACACAGTAGAATTCTGTGGCGCAGACCATGCTGTATTAACACATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR TCA 90 bp ACTTTTGTTAAAAGTCCAAGTGGGTATCATATGCCTATTTATTCTCAGAGTGCCTCTGTGTACATGTTCTaGGCCATCATCCCAGATCTG +
Preference number: 4 (lower is better)
Translates to: TFVKSPSGYHMPIYSQSASVYMF*AIIPDL
Trigger: CAGATCTGGGATGATGGCTCAGAACATGTACACAGA...GGCACTCTGAGAATAAATAGGCATATGATACCCACTTGGACTTTTAACAAAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR GCA 90 bp AACACATTTTTACCCGGAACTTTGAAAGGTAAAAAGCGATTGCTATACAACATCAGTGCAGGGCTGTGCTaGCTTTCCCTGTCTGTTTAT +
Preference number: 4 (lower is better)
Translates to: NTFLPGTLKGKKRLLYNISAGLC*LSLSVY
Trigger: ATAAACAGACAGGGAAAGGCAGCACAGCCCTGCACT...GATGTTGTATAGCAATCGCTTTTTACCTTTCAAAGTTCCGGGTAAAAATGTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR GCA 90 bp GAACCTGACAGATTAGTTTGGGACTGGAGTTCTAATGTTGATATGAATCAACTTGAATGGCATGCAAAATaGCAGAATCCTGCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: EPDRLVWDWSSNVDMNQLEWHAK*QNPAAA
Trigger: TGCAGCTGCAGGATTCTGGCATTTTGCATGCCATTC...AAGTTGATTCATATCAACATTAGAACTCCAGTCCCAAACTAATCTGTCAGGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR GCA 90 bp GGCATTAGAGAACATGGGCTGCCATACAAACAGTTCATGAAACTGGTTATCTGGAATAGCATCCTAAGCTaGATATTATGTTATCCACCC +
Preference number: 4 (lower is better)
Translates to: GIREHGLPYKQFMKLVIWNSILS*ILCYPP
Trigger: GGGTGGATAACATAATATGCAGCTTAGGATGCTATT...CCAGATAACCAGTTTCATGAACTGTTTGTATGGCAGCCCATGTTCTCTAATGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CCA 90 bp AACACATTTTTACCCGGAACTTTGAAAGGTAAAAAGCGATTGCTATACAACATCGTCCGAATCATCCCATaGAGCTTGGCGTGTTCCTTT +
Preference number: 4 (lower is better)
Translates to: NTFLPGTLKGKKRLLYNIVRIIP*SLACSF
Trigger: AAAGGAACACGCCAAGCTCCATGGGATGATTCGGAC...GATGTTGTATAGCAATCGCTTTTTACCTTTCAAAGTTCCGGGTAAAAATGTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CCA 90 bp CGCCACAGAATTCTACTGTGTACAGTTGCTTTCTGTGTGACTCAGGAAGTTCAATCCTTTGTCAGTTCTTaGACGATGTTATTTTCTCCA +
Preference number: 4 (lower is better)
Translates to: RHRILLCTVAFCVTQEVQSFVSS*TMLFSP
Trigger: TGGAGAAAATAACATCGTCCAAGAACTGACAAAGGA...TTGAACTTCCTGAGTCACACAGAAAGCAACTGTACACAGTAGAATTCTGTGGCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CCA 90 bp ACTTTTGTTAAAAGTCCAAGTGGGTATCATATGCCTATTTATTCTCAGAGTGCCCATTCCCAATATTCTTaGCGAGCAGCAGCTCAGATG +
Preference number: 4 (lower is better)
Translates to: TFVKSPSGYHMPIYSQSAHSQYS*RAAAQM
Trigger: CATCTGAGCTGCTGCTCGCCAAGAATATTGGGAATG...GGCACTCTGAGAATAAATAGGCATATGATACCCACTTGGACTTTTAACAAAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CCA 90 bp CGCCACAGAATTCTACTGTGTACAGTTGCTTTCTGTGTGACTCAGGAAGTTCAAATGAAACTGGTTATCTaGCAAGAGTTTTGGTACCAA +
Preference number: 4 (lower is better)
Translates to: RHRILLCTVAFCVTQEVQMKLVI*QEFWYQ
Trigger: TTGGTACCAAAACTCTTGCCAGATAACCAGTTTCAT...TTGAACTTCCTGAGTCACACAGAAAGCAACTGTACACAGTAGAATTCTGTGGCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CCA 90 bp CTACTGTGTACAGTTGCTTTCTGTGTGACTCAGGAAGTTCAAGAAGGCAAATTCGAAGCAGCAGTTCACTaGCCGCCTAAAATAATAATT +
Preference number: 4 (lower is better)
Translates to: LLCTVAFCVTQEVQEGKFEAAVH*PPKIII
Trigger: AATTATTATTTTAGGCGGCCAGTGAACTGCTGCTTC...GAATTTGCCTTCTTGAACTTCCTGAGTCACACAGAAAGCAACTGTACACAGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CCA 90 bp ACTTTTGTTAAAAGTCCAAGTGGGTATCATATGCCTATTTATTCTCAGAGTGCCTTCAGAGCTGGGCTATaGACTTCTGAAGCAGCAGTT +
Preference number: 4 (lower is better)
Translates to: TFVKSPSGYHMPIYSQSAFRAGL*TSEAAV
Trigger: AACTGCTGCTTCAGAAGTCCATAGCCCAGCTCTGAA...GGCACTCTGAGAATAAATAGGCATATGATACCCACTTGGACTTTTAACAAAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR TCA 90 bp GAACCTGACAGATTAGTTTGGGACTGGAGTTCTAATGTTGATATGAATCAACTTAAATATCTCTCGTTTTaGCGGCCTCGCAAAGACTGT +
Preference number: 4 (lower is better)
Translates to: EPDRLVWDWSSNVDMNQLKYLSF*RPRKDC
Trigger: ACAGTCTTTGCGAGGCCGTCAAAACGAGAGATATTT...AAGTTGATTCATATCAACATTAGAACTCCAGTCCCAAACTAATCTGTCAGGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR TCA 90 bp CTACTGTGTACAGTTGCTTTCTGTGTGACTCAGGAAGTTCAAGAAGGCAAATTCCCAATATTCCTACTATaGATCTTACCCTCGCAATTA +
Preference number: 4 (lower is better)
Translates to: LLCTVAFCVTQEVQEGKFPIFLL*ILPSQL
Trigger: TAATTGCGAGGGTAAGATTCATAGTAGGAATATTGG...GAATTTGCCTTCTTGAACTTCCTGAGTCACACAGAAAGCAACTGTACACAGTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR GCA 90 bp GAACCTGACAGATTAGTTTGGGACTGGAGTTCTAATGTTGATATGAATCAACTTGAACATTTCCTTTTCTaGCACACTTTTCGGATCCCG +
Preference number: 4 (lower is better)
Translates to: EPDRLVWDWSSNVDMNQLEHFLF*HTFRIP
Trigger: CGGGATCCGAAAAGTGTGGCAGAAAAGGAAATGTTC...AAGTTGATTCATATCAACATTAGAACTCCAGTCCCAAACTAATCTGTCAGGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR GCA 90 bp GAACCTGACAGATTAGTTTGGGACTGGAGTTCTAATGTTGATATGAATCAACTTCAGTCAGCGATAAAGTaGACAAATGACACCGGGAAT +
Preference number: 4 (lower is better)
Translates to: EPDRLVWDWSSNVDMNQLQSAIK*TNDTGN
Trigger: ATTCCCGGTGTCATTTGTGCACTTTATCGCTGACTG...AAGTTGATTCATATCAACATTAGAACTCCAGTCCCAAACTAATCTGTCAGGTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR GCA 90 bp CGCCACAGAATTCTACTGTGTACAGTTGCTTTCTGTGTGACTCAGGAAGTTCAATGTAAATTTCCAAGTTaGTTTTTAAACACTGGGTGG +
Preference number: 4 (lower is better)
Translates to: RHRILLCTVAFCVTQEVQCKFPS*FLNTGW
Trigger: CCACCCAGTGTTTAAAAAGCAACTTGGAAATTTACA...TTGAACTTCCTGAGTCACACAGAAAGCAACTGTACACAGTAGAATTCTGTGGCG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR GCA 90 bp GATGTGTTAATACAGCATGGTCTGCGCCACAGAATTCTACTGTGTACAGTTGCTGACATAAGTGCACTGTaGAAAATACATCTGTTTACT +
Preference number: 4 (lower is better)
Translates to: DVLIQHGLRHRILLCTVADISAL*KIHLFT
Trigger: AGTAAACAGATGTATTTTGCACAGTGCACTTATGTC...AGCAACTGTACACAGTAGAATTCTGTGGCGCAGACCATGCTGTATTAACACATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR GCA 90 bp CTACTGTGTACAGTTGCTTTCTGTGTGACTCAGGAAGTTCAAGAAGGCAAATTCTATATACAGTTGTGCTaGAACCAAAGTAATCAGGTG +
Preference number: 4 (lower is better)
Translates to: LLCTVAFCVTQEVQEGKFYIQLC*NQSNQV
Trigger: CACCTGATTACTTTGGTTGCAGCACAACTGTATATA...GAATTTGCCTTCTTGAACTTCCTGAGTCACACAGAAAGCAACTGTACACAGTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR GCA 90 bp AACACATTTTTACCCGGAACTTTGAAAGGTAAAAAGCGATTGCTATACAACATCAGGCTGTCTGAACTTTaGCAACATTCCGTGGAGGAA +
Preference number: 4 (lower is better)
Translates to: NTFLPGTLKGKKRLLYNIRLSEL*QHSVEE
Trigger: TTCCTCCACGGAATGTTGGCAAAGTTCAGACAGCCT...GATGTTGTATAGCAATCGCTTTTTACCTTTCAAAGTTCCGGGTAAAAATGTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000281419.8
CDS-3UTR CCA 90 bp GGCATTAGAGAACATGGGCTGCCATACAAACAGTTCATGAAACTGGTTATCTGGAGATTAGTTTGGGACTaGAGTTCTAATGTTGATATG +
Preference number: 4 (lower is better)
Translates to: GIREHGLPYKQFMKLVIWRLVWD*SSNVDM
Trigger: CATATCAACATTAGAACTCCAGTCCCAAACTAATCT...CCAGATAACCAGTTTCATGAACTGTTTGTATGGCAGCCCATGTTCTCTAATGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR TCA 90 bp ACTTTTGTTAAAAGTCCAAGTGGGTATCATATGCCTATTTATTCTCAGAGTGCCGTAGGAAACAGCAAGTaGTGTGTTAATACAGCATGG +
Preference number: 4 (lower is better)
Translates to: TFVKSPSGYHMPIYSQSAVGNSK*CVNTAW
Trigger: CCATGCTGTATTAACACATCACTTGCTGTTTCCTAC...GGCACTCTGAGAATAAATAGGCATATGATACCCACTTGGACTTTTAACAAAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR TCA 90 bp ACTTTTGTTAAAAGTCCAAGTGGGTATCATATGCCTATTTATTCTCAGAGTGCCTACAAGACACTAAACTaGGTAAACATTCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: TFVKSPSGYHMPIYSQSAYKTLN*VNILLG
Trigger: GCCCAGGAGAATGTTTACTCAGTTTAGTGTCTTGTA...GGCACTCTGAGAATAAATAGGCATATGATACCCACTTGGACTTTTAACAAAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR GCA 90 bp GAACCTGACAGATTAGTTTGGGACTGGAGTTCTAATGTTGATATGAATCAACTTCCCAGAGCTGTTGATTaGTTTCACGGATTTCTTCAT +
Preference number: 4 (lower is better)
Translates to: EPDRLVWDWSSNVDMNQLPRAVD*FHGFLH
Trigger: ATGAAGAAATCCGTGAAAGCAATCAACAGCTCTGGG...AAGTTGATTCATATCAACATTAGAACTCCAGTCCCAAACTAATCTGTCAGGTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR GCA 90 bp GAACCTGACAGATTAGTTTGGGACTGGAGTTCTAATGTTGATATGAATCAACTTGTAAGCTATAAGCTGTaGTCTGACGAATTTGGGAGT +
Preference number: 4 (lower is better)
Translates to: EPDRLVWDWSSNVDMNQLVSYKL*SDEFGS
Trigger: ACTCCCAAATTCGTCAGAGCACAGCTTATAGCTTAC...AAGTTGATTCATATCAACATTAGAACTCCAGTCCCAAACTAATCTGTCAGGTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR TCA 90 bp ACTTTTGTTAAAAGTCCAAGTGGGTATCATATGCCTATTTATTCTCAGAGTGCCTTTTACCCGGAACTTTaGAAGGTAAAAAGCGATTGC +
Preference number: 4 (lower is better)
Translates to: TFVKSPSGYHMPIYSQSAFYPEL*KVKSDC
Trigger: GCAATCGCTTTTTACCTTTCAAAGTTCCGGGTAAAA...GGCACTCTGAGAATAAATAGGCATATGATACCCACTTGGACTTTTAACAAAAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR GCA 90 bp GAACCTGACAGATTAGTTTGGGACTGGAGTTCTAATGTTGATATGAATCAACTTCTGTTCAACCTGCAATaGGGATTTCAAAATATCTCG +
Preference number: 4 (lower is better)
Translates to: EPDRLVWDWSSNVDMNQLLFNLQ*GFQNIS
Trigger: CGAGATATTTTGAAATCCGCATTGCAGGTTGAACAG...AAGTTGATTCATATCAACATTAGAACTCCAGTCCCAAACTAATCTGTCAGGTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR GCA 90 bp AACACATTTTTACCCGGAACTTTGAAAGGTAAAAAGCGATTGCTATACAACATCGTAAGCTATAAGCTGTaGTCTGACGAATTTGGGAGT +
Preference number: 4 (lower is better)
Translates to: NTFLPGTLKGKKRLLYNIVSYKL*SDEFGS
Trigger: ACTCCCAAATTCGTCAGAGCACAGCTTATAGCTTAC...GATGTTGTATAGCAATCGCTTTTTACCTTTCAAAGTTCCGGGTAAAAATGTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CCA 90 bp GAACCTGACAGATTAGTTTGGGACTGGAGTTCTAATGTTGATATGAATCAACTTGAAGCAGCAGTTCACTaGCCGCCTAAAATAATAATT +
Preference number: 4 (lower is better)
Translates to: EPDRLVWDWSSNVDMNQLEAAVH*PPKIII
Trigger: AATTATTATTTTAGGCGGCCAGTGAACTGCTGCTTC...AAGTTGATTCATATCAACATTAGAACTCCAGTCCCAAACTAATCTGTCAGGTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CCA 90 bp GAACCTGACAGATTAGTTTGGGACTGGAGTTCTAATGTTGATATGAATCAACTTCCTGACAGATTAGTTTaGGACTGGAGTTCTAATGTT +
Preference number: 4 (lower is better)
Translates to: EPDRLVWDWSSNVDMNQLPDRLV*DWSSNV
Trigger: AACATTAGAACTCCAGTCCCAAACTAATCTGTCAGG...AAGTTGATTCATATCAACATTAGAACTCCAGTCCCAAACTAATCTGTCAGGTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR TCA 90 bp AACACATTTTTACCCGGAACTTTGAAAGGTAAAAAGCGATTGCTATACAACATCGTAAGTTCTGTCATGTaGAATGAGGTCAAAGCACTT +
Preference number: 4 (lower is better)
Translates to: NTFLPGTLKGKKRLLYNIVSSVM*NEVKAL
Trigger: AAGTGCTTTGACCTCATTTCACATGACAGAACTTAC...GATGTTGTATAGCAATCGCTTTTTACCTTTCAAAGTTCCGGGTAAAAATGTGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR GCA 90 bp AACACATTTTTACCCGGAACTTTGAAAGGTAAAAAGCGATTGCTATACAACATCCTGTTCAACCTGCAATaGGGATTTCAAAATATCTCG +
Preference number: 4 (lower is better)
Translates to: NTFLPGTLKGKKRLLYNILFNLQ*GFQNIS
Trigger: CGAGATATTTTGAAATCCGCATTGCAGGTTGAACAG...GATGTTGTATAGCAATCGCTTTTTACCTTTCAAAGTTCCGGGTAAAAATGTGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR TCA 90 bp AACACATTTTTACCCGGAACTTTGAAAGGTAAAAAGCGATTGCTATACAACATCCCAATATTCCTACTATaGATCTTACCCTCGCAATTA +
Preference number: 4 (lower is better)
Translates to: NTFLPGTLKGKKRLLYNIPIFLL*ILPSQL
Trigger: TAATTGCGAGGGTAAGATTCATAGTAGGAATATTGG...GATGTTGTATAGCAATCGCTTTTTACCTTTCAAAGTTCCGGGTAAAAATGTGTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR GCA 90 bp GAACCTGACAGATTAGTTTGGGACTGGAGTTCTAATGTTGATATGAATCAACTTTCTTTCTGTTCAACCTaGAATGCGGATTTCAAAATA +
Preference number: 4 (lower is better)
Translates to: EPDRLVWDWSSNVDMNQLSFCST*NADFKI
Trigger: TATTTTGAAATCCGCATTGCAGGTTGAACAGAAAGA...AAGTTGATTCATATCAACATTAGAACTCCAGTCCCAAACTAATCTGTCAGGTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR GCA 90 bp AACACATTTTTACCCGGAACTTTGAAAGGTAAAAAGCGATTGCTATACAACATCCAAGTGGGTATCATATaGCTATTTATTCTCAGAGTG +
Preference number: 4 (lower is better)
Translates to: NTFLPGTLKGKKRLLYNIQVGII*LFILRV
Trigger: CACTCTGAGAATAAATAGGCATATGATACCCACTTG...GATGTTGTATAGCAATCGCTTTTTACCTTTCAAAGTTCCGGGTAAAAATGTGTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CCA 90 bp AACACATTTTTACCCGGAACTTTGAAAGGTAAAAAGCGATTGCTATACAACATCTCCTTTGTCAGTTCTTaGACGATGTTATTTTCTCCA +
Preference number: 4 (lower is better)
Translates to: NTFLPGTLKGKKRLLYNISFVSS*TMLFSP
Trigger: TGGAGAAAATAACATCGTCCAAGAACTGACAAAGGA...GATGTTGTATAGCAATCGCTTTTTACCTTTCAAAGTTCCGGGTAAAAATGTGTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CCA 90 bp AACACATTTTTACCCGGAACTTTGAAAGGTAAAAAGCGATTGCTATACAACATCATGAAACTGGTTATCTaGCAAGAGTTTTGGTACCAA +
Preference number: 4 (lower is better)
Translates to: NTFLPGTLKGKKRLLYNIMKLVI*QEFWYQ
Trigger: TTGGTACCAAAACTCTTGCCAGATAACCAGTTTCAT...GATGTTGTATAGCAATCGCTTTTTACCTTTCAAAGTTCCGGGTAAAAATGTGTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR GCA 90 bp AACACATTTTTACCCGGAACTTTGAAAGGTAAAAAGCGATTGCTATACAACATCGACATAAGTGCACTGTaGAAAATACATCTGTTTACT +
Preference number: 4 (lower is better)
Translates to: NTFLPGTLKGKKRLLYNIDISAL*KIHLFT
Trigger: AGTAAACAGATGTATTTTGCACAGTGCACTTATGTC...GATGTTGTATAGCAATCGCTTTTTACCTTTCAAAGTTCCGGGTAAAAATGTGTT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS CCA 90 bp CCAGAGCACTCTGTCCACGTGAGCCTGCCACCGATGGCCAGGGTCTaGAGTGATGCTGGGCACTGGCCACTGGCCCCGCCCCGAGTCTGC +
Preference number: 5 (lower is better)
Translates to: PEHSVHVSLPPMARV*SDAGHWPLAPPRVC
Trigger: GCAGACTCGGGGCGGGGCCAGTGGCCAGTGCCCAGCATCACTCCAGACCCTGGCCATCGGTGGCAGGCTCACGTGGACAGAGTGCTCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484590.1
CDS CCA 90 bp GGGGGCCTGATCTGTGAGATCCCAGGCGGGGCAGGCTTGCTCGGCTaGCTCAAGGCTTCCATTACGCTGGGCGTCTTGGCAACGGGTGGG +
Preference number: 5 (lower is better)
Translates to: GGLICEIPGGAGLLG*LKASITLGVLATGG
Trigger: CCCACCCGTTGCCAAGACGCCCAGCGTAATGGAAGCCTTGAGCCAGCCGAGCAAGCCTGCCCCGCCTGGGATCTCACAGATCAGGCCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000281419.8
ENST00000315273.4
ENST00000491413.1
CDS GCA 90 bp GCCAGGACGGGTCCGAGCACTCTGGGTCAGCGCTGTCCATGCCTCTaGCGTCCCTGCTTCTGGGAACCAATGTGGCTGACCACGGGCTCA +
Preference number: 5 (lower is better)
Translates to: ARTGPSTLGQRCPCL*RPCFWEPMWLTTGS
Trigger: TGAGCCCGTGGTCAGCCACATTGGTTCCCAGAAGCAGGGACGGCAGAGGCATGGACAGCGCTGACCCAGAGTGCTCGGACCCGTCCTGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484590.1
CDS GCA 90 bp GGTCCGAGCACTCTGGGTCAGCGCTGTCCATGCCTCTGCCGTCCCTaGTTCTGGGAACCAATGTGGCTGACCACGGGCTCAAGCCCCATC +
Preference number: 5 (lower is better)
Translates to: GPSTLGQRCPCLCRP*FWEPMWLTTGSSPI
Trigger: GATGGGGCTTGAGCCCGTGGTCAGCCACATTGGTTCCCAGAAGCAGGGACGGCAGAGGCATGGACAGCGCTGACCCAGAGTGCTCGGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484590.1
CDS GCA 90 bp GGCTTTGCCAGGACGGGTCCGAGCACTCTGGGTCAGCGCTGTCCATaGCTCTGCCGTCCCTGCTTCTGGGAACCAATGTGGCTGACCACG +
Preference number: 5 (lower is better)
Translates to: GFARTGPSTLGQRCP*LCRPCFWEPMWLTT
Trigger: CGTGGTCAGCCACATTGGTTCCCAGAAGCAGGGACGGCAGAGGCATGGACAGCGCTGACCCAGAGTGCTCGGACCCGTCCTGGCAAAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484590.1
CDS CCA 90 bp GTCAGGGGATTGGTAGATGTCACGCGAAGAGGGGGCAGCGGTGGATaGACAGCTGGCGGATCTGACGAAGATCGCTGCCGGCTTCCACCG +
Preference number: 5 (lower is better)
Translates to: VRGLVDVTRRGGSGG*TAGGSDEDRCRLPP
Trigger: CGGTGGAAGCCGGCAGCGATCTTCGTCAGATCCGCCAGCTGTCCATCCACCGCTGCCCCCTCTTCGCGTGACATCTACCAATCCCCTGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000281419.8
CDS CCA 90 bp CAGCGCTGTCCATGCCTCTGCCGTCCCTGCTTCTGGGAACCAATGTaGCTGACCACGGGCTCAAGCCCCATCCATGAACCTCTGGGCCAG +
Preference number: 5 (lower is better)
Translates to: QRCPCLCRPCFWEPM*LTTGSSPIHEPLGQ
Trigger: CTGGCCCAGAGGTTCATGGATGGGGCTTGAGCCCGTGGTCAGCCACATTGGTTCCCAGAAGCAGGGACGGCAGAGGCATGGACAGCGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484590.1
CDS TCA 90 bp GCTGTCCATGCCTCTGCCGTCCCTGCTTCTGGGAACCAATGTGGCTaGCCACGGGCTCAAGCCCCATCCATGAACCTCTGGGCCAGCACA +
Preference number: 5 (lower is better)
Translates to: AVHASAVPASGNQCG*PRAQAPSMNLWAST
Trigger: TGTGCTGGCCCAGAGGTTCATGGATGGGGCTTGAGCCCGTGGTCAGCCACATTGGTTCCCAGAAGCAGGGACGGCAGAGGCATGGACAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484590.1
CDS TCA 90 bp TGTCACGCGAAGAGGGGGCAGCGGTGGATGGACAGCTGGCGGATCTaGCGAAGATCGCTGCCGGCTTCCACCGTCCACACTTACAGAGTT +
Preference number: 5 (lower is better)
Translates to: CHAKRGQRWMDSWRI*RRSLPASTVHTYRV
Trigger: AACTCTGTAAGTGTGGACGGTGGAAGCCGGCAGCGATCTTCGTCAGATCCGCCAGCTGTCCATCCACCGCTGCCCCCTCTTCGCGTGACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281419.8
CDS GCA 90 bp GGGGGCAGCGGTGGATGGACAGCTGGCGGATCTGACGAAGATCGCTaGCGGCTTCCACCGTCCACACTTACAGAGTTTGTCTTCCACAGG +
Preference number: 5 (lower is better)
Translates to: GGSGGWTAGGSDEDR*RLPPSTLTEFVFHR
Trigger: CCTGTGGAAGACAAACTCTGTAAGTGTGGACGGTGGAAGCCGGCAGCGATCTTCGTCAGATCCGCCAGCTGTCCATCCACCGCTGCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281419.8
CDS GCA 90 bp CATGAAAGGGCAGGGCTGAACCTTAACCTCAGGCCCAGATGGCTTTaGCAGGACGGGTCCGAGCACTCTGGGTCAGCGCTGTCCATGCCT +
Preference number: 5 (lower is better)
Translates to: HERAGLNLNLRPRWL*QDGSEHSGSALSMP
Trigger: AGGCATGGACAGCGCTGACCCAGAGTGCTCGGACCCGTCCTGGCAAAGCCATCTGGGCCTGAGGTTAAGGTTCAGCCCTGCCCTTTCATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484590.1
CDS CCA 90 bp AGCACTCTGGGTCAGCGCTGTCCATGCCTCTGCCGTCCCTGCTTCTaGGAACCAATGTGGCTGACCACGGGCTCAAGCCCCATCCATGAA +
Preference number: 5 (lower is better)
Translates to: STLGQRCPCLCRPCF*EPMWLTTGSSPIHE
Trigger: TTCATGGATGGGGCTTGAGCCCGTGGTCAGCCACATTGGTTCCCAGAAGCAGGGACGGCAGAGGCATGGACAGCGCTGACCCAGAGTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484590.1
CDS CCA 90 bp CCATCACATGAAAGGGCAGGGCTGAACCTTAACCTCAGGCCCAGATaGCTTTGCCAGGACGGGTCCGAGCACTCTGGGTCAGCGCTGTCC +
Preference number: 5 (lower is better)
Translates to: PSHERAGLNLNLRPR*LCQDGSEHSGSALS
Trigger: GGACAGCGCTGACCCAGAGTGCTCGGACCCGTCCTGGCAAAGCCATCTGGGCCTGAGGTTAAGGTTCAGCCCTGCCCTTTCATGTGATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484590.1
CDS TCA 90 bp ACTCGTTTGCTATCTCGATGGAGGCCTTCCCCCGCAGGAGCAACTTaGGGCACTCGGCATTGTCGGTCAGGCAGCAGTAGTGCAGGGCTG +
Preference number: 5 (lower is better)
Translates to: TRLLSRWRPSPAGAT*GTRHCRSGSSSAGL
Trigger: CAGCCCTGCACTACTGCTGCCTGACCGACAATGCCGAGTGCCTCAAGTTGCTCCTGCGGGGGAAGGCCTCCATCGAGATAGCAAACGAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CAA 90 bp AGAAAGTTCAGAGCTGGGCTATGGACTTCTGAAGCAGCAGTTCACTGGCCGCCTATTACGCTGGGCGTCTaGGCAACGGGTGGGGGCGGC +
Preference number: 5 (lower is better)
Translates to: RKFRAGLWTSEAAVHWPPITLGV*ATGGGG
Trigger: GCCGCCCCCACCCGTTGCCAAGACGCCCAGCGTAAT...AGGCGGCCAGTGAACTGCTGCTTCAGAAGTCCATAGCCCAGCTCTGAACTTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS CCA 90 bp ACTGCCTCCCTGCAAGGGCACCTTGGTGGTCTACACAAACCCACCTaGACAAGAGGACAAGCGATGCCAGCTTTGAGGCTGCTGGCAGTG +
Preference number: 5 (lower is better)
Translates to: TASLQGHLGGLHKPT*TRGQAMPALRLLAV
Trigger: CACTGCCAGCAGCCTCAAAGCTGGCATCGCTTGTCCTCTTGTCCAGGTGGGTTTGTGTAGACCACCAAGGTGCCCTTGCAGGGAGGCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471687.1
CDS TCA 90 bp CCACTGTACGCTCCCGTCTGTCGACACTCCCTTCGCTGCTCGGAATaGACCCTGTCTGGCCTCAATGCTTGCAGTCCCAGAATGAAGGGA +
Preference number: 5 (lower is better)
Translates to: PLYAPVCRHSLRCSE*TLSGLNACSPRMKG
Trigger: TCCCTTCATTCTGGGACTGCAAGCATTGAGGCCAGACAGGGTTCATTCCGAGCAGCGAAGGGAGTGTCGACAGACGGGAGCGTACAGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484590.1
CDS GCA 90 bp TTCAACTTGGTTGCCTGCGACTTCCTAGGCATGGGTGCAGGGGGCTaGAGGACCATAGCATTGGACAGAGGACCCAGAGCTTCCGTTGCA +
Preference number: 5 (lower is better)
Translates to: FNLVACDFLGMGAGG*RTIALDRGPRASVA
Trigger: TGCAACGGAAGCTCTGGGTCCTCTGTCCAATGCTATGGTCCTGCAGCCCCCTGCACCCATGCCTAGGAAGTCGCAGGCAACCAAGTTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281419.8
ENST00000315273.4
ENST00000484590.1
CDS CCA 90 bp TTCATCTCCACAGAGGGCAACTGCCTCCCTGCAAGGGCACCTTGGTaGTCTACACAAACCCACCTGGACAAGAGGACAAGCGATGCCAGC +
Preference number: 5 (lower is better)
Translates to: FISTEGNCLPARAPW*STQTHLDKRTSDAS
Trigger: GCTGGCATCGCTTGTCCTCTTGTCCAGGTGGGTTTGTGTAGACCACCAAGGTGCCCTTGCAGGGAGGCAGTTGCCCTCTGTGGAGATGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471687.1
CDS TCA 90 bp TTCCAGATAAGGCTTGGGTCAGCAGCTCCTCACAGTGCTCGTGCTTaGGGCGCTTGGCAATGTCCAGCGGAGTCTCTCCTGACTCGTTTG +
Preference number: 5 (lower is better)
Translates to: FQIRLGSAAPHSARA*GAWQCPAESLLTRL
Trigger: CAAACGAGTCAGGAGAGACTCCGCTGGACATTGCCAAGCGCCTCAAGCACGAGCACTGTGAGGAGCTGCTGACCCAAGCCTTATCTGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS TCA 90 bp CTCTGGGCCAGCACACCCCAAAGCCACAAGGTAGAAACACATGAGTaGGGAAGTAGTTCTCAGGGCTGGCAGAGAGGGGTCCCTCATCTC +
Preference number: 5 (lower is better)
Translates to: LWASTPQSHKVETHE*GSSSQGWQRGVPHL
Trigger: GAGATGAGGGACCCCTCTCTGCCAGCCCTGAGAACTACTTCCTCACTCATGTGTTTCTACCTTGTGGCTTTGGGGTGTGCTGGCCCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484590.1
CDS TCA 90 bp TTTCTGATCCTAAAACCAGGGCTTTTCCAGAGCACTCTGTCCACGTaGGCCTGCCACCGATGGCCAGGGTCTGGAGTGATGCTGGGCACT +
Preference number: 5 (lower is better)
Translates to: FLILKPGLFQSTLST*ACHRWPGSGVMLGT
Trigger: AGTGCCCAGCATCACTCCAGACCCTGGCCATCGGTGGCAGGCTCACGTGGACAGAGTGCTCTGGAAAAGCCCTGGTTTTAGGATCAGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484590.1
CDS CCA 90 bp AACTTCATCTCCACAGAGGGCAACTGCCTCCCTGCAAGGGCACCTTaGTGGTCTACACAAACCCACCTGGACAAGAGGACAAGCGATGCC +
Preference number: 5 (lower is better)
Translates to: NFISTEGNCLPARAP*WSTQTHLDKRTSDA
Trigger: GGCATCGCTTGTCCTCTTGTCCAGGTGGGTTTGTGTAGACCACCAAGGTGCCCTTGCAGGGAGGCAGTTGCCCTCTGTGGAGATGAAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471687.1
CDS CCA 90 bp GTAAATGTCTCTGCAGACATCACTACACTGACCTGGCTGACCCCCTaGCCGGCAGTCATCCCTAACTACAGAACACTCGCAGGGAAGGCC +
Preference number: 5 (lower is better)
Translates to: VNVSADITTLTWLTP*PAVIPNYRTLAGKA
Trigger: GGCCTTCCCTGCGAGTGTTCTGTAGTTAGGGATGACTGCCGGCCAGGGGGTCAGCCAGGTCAGTGTAGTGATGTCTGCAGAGACATTTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484590.1
CDS-3UTR CAA 90 bp AGAAAGTTCAGAGCTGGGCTATGGACTTCTGAAGCAGCAGTTCACTGGCCGCCTTGGCAGGTTAGCAGGTaGAGCTTTGCAGGAGGCCGG +
Preference number: 5 (lower is better)
Translates to: RKFRAGLWTSEAAVHWPPWQVSR*SFAGGR
Trigger: CCGGCCTCCTGCAAAGCTCAACCTGCTAACCTGCCA...AGGCGGCCAGTGAACTGCTGCTTCAGAAGTCCATAGCCCAGCTCTGAACTTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CAA 90 bp GCTGGGCTATGGACTTCTGAAGCAGCAGTTCACTGGCCGCCTAAAATAATAATTGTCAGTGGGGTGGACTaGTCAGCCCCCGGCGCAGGC +
Preference number: 5 (lower is better)
Translates to: AGLWTSEAAVHWPPKIIIVSGVD*SAPGAG
Trigger: GCCTGCGCCGGGGGCTGACAAGTCCACCCCACTGAC...AATTATTATTTTAGGCGGCCAGTGAACTGCTGCTTCAGAAGTCCATAGCCCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS GCA 90 bp GGCACTCGGCATTGTCGGTCAGGCAGCAGTAGTGCAGGGCTGTGCTaGCTTTCCCTGTCTGTTTATCCAGGTTCCCACTGTTCTGAACTA +
Preference number: 5 (lower is better)
Translates to: GTRHCRSGSSSAGLC*LSLSVYPGSHCSEL
Trigger: TAGTTCAGAACAGTGGGAACCTGGATAAACAGACAGGGAAAGGCAGCACAGCCCTGCACTACTGCTGCCTGACCGACAATGCCGAGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS GCA 90 bp ACAGAGGCCTTTGAACTTCATCTCCACAGAGGGCAACTGCCTCCCTaGAAGGGCACCTTGGTGGTCTACACAAACCCACCTGGACAAGAG +
Preference number: 5 (lower is better)
Translates to: TEAFELHLHRGQLPP*KGTLVVYTNPPGQE
Trigger: CTCTTGTCCAGGTGGGTTTGTGTAGACCACCAAGGTGCCCTTGCAGGGAGGCAGTTGCCCTCTGTGGAGATGAAGTTCAAAGGCCTCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471687.1
CDS CCA 90 bp TGTGACACAAGATCCGTCAACTCCAGAGCTAAGGACCAGTGCCAGTaGCTTCAGCTCCCCGGTGGATCTCCTGGACCTAGCATAAAGCCA +
Preference number: 5 (lower is better)
Translates to: CDTRSVNSRAKDQCQ*LQLPGGSPGPSIKP
Trigger: TGGCTTTATGCTAGGTCCAGGAGATCCACCGGGGAGCTGAAGCCACTGGCACTGGTCCTTAGCTCTGGAGTTGACGGATCTTGTGTCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484590.1
CDS-3UTR CAA 90 bp AGAAAGTTCAGAGCTGGGCTATGGACTTCTGAAGCAGCAGTTCACTGGCCGCCTGTGGGGGTCAGGGGATaGGTAGATGTCACGCGAAGA +
Preference number: 5 (lower is better)
Translates to: RKFRAGLWTSEAAVHWPPVGVRG*VDVTRR
Trigger: TCTTCGCGTGACATCTACCAATCCCCTGACCCCCAC...AGGCGGCCAGTGAACTGCTGCTTCAGAAGTCCATAGCCCAGCTCTGAACTTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000281419.8
CDS TCA 90 bp GACTTGACAGAGGAAGGCTTGACTGGGACAAGTTACAGAGGCCTTTaGACTTCATCTCCACAGAGGGCAACTGCCTCCCTGCAAGGGCAC +
Preference number: 5 (lower is better)
Translates to: DLTEEGLTGTSYRGL*TSSPQRATASLQGH
Trigger: GTGCCCTTGCAGGGAGGCAGTTGCCCTCTGTGGAGATGAAGTTCAAAGGCCTCTGTAACTTGTCCCAGTCAAGCCTTCCTCTGTCAAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471687.1
CDS GCA 90 bp GACAAGTTACAGAGGCCTTTGAACTTCATCTCCACAGAGGGCAACTaGCTCCCTGCAAGGGCACCTTGGTGGTCTACACAAACCCACCTG +
Preference number: 5 (lower is better)
Translates to: DKLQRPLNFISTEGN*LPARAPWWSTQTHL
Trigger: CAGGTGGGTTTGTGTAGACCACCAAGGTGCCCTTGCAGGGAGGCAGTTGCCCTCTGTGGAGATGAAGTTCAAAGGCCTCTGTAACTTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471687.1
CDS GCA 90 bp AAAAGGTGTGACACAAGATCCGTCAACTCCAGAGCTAAGGACCAGTaGCAGTGGCTTCAGCTCCCCGGTGGATCTCCTGGACCTAGCATA +
Preference number: 5 (lower is better)
Translates to: KRCDTRSVNSRAKDQ*QWLQLPGGSPGPSI
Trigger: TATGCTAGGTCCAGGAGATCCACCGGGGAGCTGAAGCCACTGGCACTGGTCCTTAGCTCTGGAGTTGACGGATCTTGTGTCACACCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484590.1
CDS CCA 90 bp TCCCGTCTGTCGACACTCCCTTCGCTGCTCGGAATGAACCCTGTCTaGCCTCAATGCTTGCAGTCCCAGAATGAAGGGAGAGAAAACATC +
Preference number: 5 (lower is better)
Translates to: SRLSTLPSLLGMNPV*PQCLQSQNEGRENI
Trigger: GATGTTTTCTCTCCCTTCATTCTGGGACTGCAAGCATTGAGGCCAGACAGGGTTCATTCCGAGCAGCGAAGGGAGTGTCGACAGACGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484590.1
CDS-3UTR CAA 90 bp AGAAAGTTCAGAGCTGGGCTATGGACTTCTGAAGCAGCAGTTCACTGGCCGCCTATGTCGCTGCCTGGGTaGGGTTTGACTGAGTCCTCA +
Preference number: 5 (lower is better)
Translates to: RKFRAGLWTSEAAVHWPPMSLPG*GLTESS
Trigger: TGAGGACTCAGTCAAACCCAACCCAGGCAGCGACAT...AGGCGGCCAGTGAACTGCTGCTTCAGAAGTCCATAGCCCAGCTCTGAACTTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CAA 90 bp AGAAAGTTCAGAGCTGGGCTATGGACTTCTGAAGCAGCAGTTCACTGGCCGCCTCCGCGTGCTTCTTCCTaGCGTATCTCCTCTCGATGT +
Preference number: 5 (lower is better)
Translates to: RKFRAGLWTSEAAVHWPPPRASS*RISSRC
Trigger: ACATCGAGAGGAGATACGCAAGGAAGAAGCACGCGG...AGGCGGCCAGTGAACTGCTGCTTCAGAAGTCCATAGCCCAGCTCTGAACTTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CAA 90 bp ACAGCATGGTCTGCGCCACAGAATTCTACTGTGTACAGTTGCTTTCTGTGTGACCCCCGCAGGAGCAACTaGAGGCACTCGGCATTGTCG +
Preference number: 5 (lower is better)
Translates to: TAWSAPQNSTVYSCFLCDPRRSN*RHSALS
Trigger: CGACAATGCCGAGTGCCTCAAGTTGCTCCTGCGGGG...GTCACACAGAAAGCAACTGTACACAGTAGAATTCTGTGGCGCAGACCATGCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS TCA 90 bp GTCTACACAAACCCACCTGGACAAGAGGACAAGCGATGCCAGCTTTaGGGCTGCTGGCAGTGGGTGCCTTCAGATCAAGATATTGCATGG +
Preference number: 5 (lower is better)
Translates to: VYTNPPGQEDKRCQL*GCWQWVPSDQDIAW
Trigger: CCATGCAATATCTTGATCTGAAGGCACCCACTGCCAGCAGCCTCAAAGCTGGCATCGCTTGTCCTCTTGTCCAGGTGGGTTTGTGTAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471687.1
CDS GCA 90 bp TTTTCTGCCACACTTTTCGGATCCCGTCACTCTTCTTGTAGAGGCTaGCGTTCCGCTCGGTCCCATGTTCCTTGTTTCCCTGAGGCTGAT +
Preference number: 5 (lower is better)
Translates to: FSATLFGSRHSSCRG*RSARSHVPCFPEAD
Trigger: ATCAGCCTCAGGGAAACAAGGAACATGGGACCGAGCGGAACGGCAGCCTCTACAAGAAGAGTGACGGGATCCGAAAAGTGTGGCAGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281419.8
ENST00000315273.4
ENST00000641030.1
CDS TCA 90 bp CCGCGTGCTTCTTCCTTGCGTATCTCCTCTCGATGTACTTGGCTGTaGTGTAGTCCTTTCTTGCATTCATGTCGCTGCCTGGGTTGGGTT +
Preference number: 5 (lower is better)
Translates to: PRASSLRISSRCTWL*CSPFLHSCRCLGWV
Trigger: AACCCAACCCAGGCAGCGACATGAATGCAAGAAAGGACTACATCACAGCCAAGTACATCGAGAGGAGATACGCAAGGAAGAAGCACGCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS GCA 90 bp TCTGGCGCCCCACAGTCACAGCAGACGTCATTGCCCGTCATCCTCTaGACTTCTGAGATGATCTCCTTTGTCAGTTCTTGGACGATGTTA +
Preference number: 5 (lower is better)
Translates to: SGAPQSQQTSLPVIL*TSEMISFVSSWTML
Trigger: TAACATCGTCCAAGAACTGACAAAGGAGATCATCTCAGAAGTGCAGAGGATGACGGGCAATGACGTCTGCTGTGACTGTGGGGCGCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281419.8
ENST00000315273.4
ENST00000641030.1
CDS-3UTR CAA 90 bp AGAAAGTTCAGAGCTGGGCTATGGACTTCTGAAGCAGCAGTTCACTGGCCGCCTTCTCTGCATACACAGTaGCCGCCAAACTTCTCCAGA +
Preference number: 5 (lower is better)
Translates to: RKFRAGLWTSEAAVHWPPSLHTQ*PPNFSR
Trigger: TCTGGAGAAGTTTGGCGGCAACTGTGTATGCAGAGA...AGGCGGCCAGTGAACTGCTGCTTCAGAAGTCCATAGCCCAGCTCTGAACTTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CAA 90 bp CGCCACAGAATTCTACTGTGTACAGTTGCTTTCTGTGTGACTCAGGAAGTTCAACCCCGCAGGAGCAACTaGAGGCACTCGGCATTGTCG +
Preference number: 5 (lower is better)
Translates to: RHRILLCTVAFCVTQEVQPRRSN*RHSALS
Trigger: CGACAATGCCGAGTGCCTCAAGTTGCTCCTGCGGGG...TTGAACTTCCTGAGTCACACAGAAAGCAACTGTACACAGTAGAATTCTGTGGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CAA 90 bp GCTGGGCTATGGACTTCTGAAGCAGCAGTTCACTGGCCGCCTAAAATAATAATTTCGTGCTTGAGGCGCTaGGCAATGTCCAGCGGAGTC +
Preference number: 5 (lower is better)
Translates to: AGLWTSEAAVHWPPKIIISCLRR*AMSSGV
Trigger: GACTCCGCTGGACATTGCCAAGCGCCTCAAGCACGA...AATTATTATTTTAGGCGGCCAGTGAACTGCTGCTTCAGAAGTCCATAGCCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CAA 90 bp ACAGCATGGTCTGCGCCACAGAATTCTACTGTGTACAGTTGCTTTCTGTGTGACTCACAGTGCTCGTGCTaGAGGCGCTTGGCAATGTCC +
Preference number: 5 (lower is better)
Translates to: TAWSAPQNSTVYSCFLCDSQCSC*RRLAMS
Trigger: GGACATTGCCAAGCGCCTCAAGCACGAGCACTGTGA...GTCACACAGAAAGCAACTGTACACAGTAGAATTCTGTGGCGCAGACCATGCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CAA 90 bp GATGTGTTAATACAGCATGGTCTGCGCCACAGAATTCTACTGTGTACAGTTGCTCGGTCTTCCCGCCGGTaGGGACTGGGCTGCAATTTC +
Preference number: 5 (lower is better)
Translates to: DVLIQHGLRHRILLCTVARSSRR*GLGCNF
Trigger: GAAATTGCAGCCCAGTCCCAACCGGCGGGAAGACCG...AGCAACTGTACACAGTAGAATTCTGTGGCGCAGACCATGCTGTATTAACACATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CAA 90 bp CGCCACAGAATTCTACTGTGTACAGTTGCTTTCTGTGTGACTCAGGAAGTTCAACGGTCTTCCCGCCGGTaGGGACTGGGCTGCAATTTC +
Preference number: 5 (lower is better)
Translates to: RHRILLCTVAFCVTQEVQRSSRR*GLGCNF
Trigger: GAAATTGCAGCCCAGTCCCAACCGGCGGGAAGACCG...TTGAACTTCCTGAGTCACACAGAAAGCAACTGTACACAGTAGAATTCTGTGGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CAA 90 bp ACAGCATGGTCTGCGCCACAGAATTCTACTGTGTACAGTTGCTTTCTGTGTGACCACAGGTCCTCTCGGTaGGCCTTTGTTGGTCAGTGG +
Preference number: 5 (lower is better)
Translates to: TAWSAPQNSTVYSCFLCDHRSSR*AFVGQW
Trigger: CCACTGACCAACAAAGGCCAACCGAGAGGACCTGTG...GTCACACAGAAAGCAACTGTACACAGTAGAATTCTGTGGCGCAGACCATGCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS TCA 90 bp GAACTAAAAAGTCTACAATGTGAAGAGAGGTTCGATCCACGGATCTaGCTGCAAGGTGGAGGGCCGTTTCATCCGGCTCATGTCCGTTGG +
Preference number: 5 (lower is better)
Translates to: ELKSLQCEERFDPRI*LQGGGPFHPAHVRW
Trigger: CCAACGGACATGAGCCGGATGAAACGGCCCTCCACCTTGCAGTCAGATCCGTGGATCGAACCTCTCTTCACATTGTAGACTTTTTAGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS GCA 90 bp GCAAAGACTGTGAAGCTTCGCCGCGTTATCCGCGTGCTTCTTCCTTaGGTATCTCCTCTCGATGTACTTGGCTGTGATGTAGTCCTTTCT +
Preference number: 5 (lower is better)
Translates to: AKTVKLRRVIRVLLP*VSPLDVLGCDVVLS
Trigger: AGAAAGGACTACATCACAGCCAAGTACATCGAGAGGAGATACGCAAGGAAGAAGCACGCGGATAACGCGGCGAAGCTTCACAGTCTTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS CCA 90 bp CCTCATCTCGAACCTGCCACCTGGCAGCCCTGGATAAATGGGTTCTaGAGAGTCAGCATTTTCATCTGCAAAAGGTGTGACACAAGATCC +
Preference number: 5 (lower is better)
Translates to: PHLEPATWQPWINGF*RVSIFICKRCDTRS
Trigger: GGATCTTGTGTCACACCTTTTGCAGATGAAAATGCTGACTCTCCAGAACCCATTTATCCAGGGCTGCCAGGTGGCAGGTTCGAGATGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484590.1
CDS-3UTR CAA 90 bp GCTGGGCTATGGACTTCTGAAGCAGCAGTTCACTGGCCGCCTAAAATAATAATTCTGCCTGGGTTGGGTTaGACTGAGTCCTCAGCTGGT +
Preference number: 5 (lower is better)
Translates to: AGLWTSEAAVHWPPKIIILPGLG*TESSAG
Trigger: ACCAGCTGAGGACTCAGTCAAACCCAACCCAGGCAG...AATTATTATTTTAGGCGGCCAGTGAACTGCTGCTTCAGAAGTCCATAGCCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CAA 90 bp GGCATTAGAGAACATGGGCTGCCATACAAACAGTTCATGAAACTGGTTATCTGGTCGTGCTTGAGGCGCTaGGCAATGTCCAGCGGAGTC +
Preference number: 5 (lower is better)
Translates to: GIREHGLPYKQFMKLVIWSCLRR*AMSSGV
Trigger: GACTCCGCTGGACATTGCCAAGCGCCTCAAGCACGA...CCAGATAACCAGTTTCATGAACTGTTTGTATGGCAGCCCATGTTCTCTAATGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CAA 90 bp GGCATTAGAGAACATGGGCTGCCATACAAACAGTTCATGAAACTGGTTATCTGGCCTCTCGGTTGGCCTTaGTTGGTCAGTGGGGTGGAC +
Preference number: 5 (lower is better)
Translates to: GIREHGLPYKQFMKLVIWPLGWP*LVSGVD
Trigger: GTCCACCCCACTGACCAACAAAGGCCAACCGAGAGG...CCAGATAACCAGTTTCATGAACTGTTTGTATGGCAGCCCATGTTCTCTAATGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CAA 90 bp GCTGGGCTATGGACTTCTGAAGCAGCAGTTCACTGGCCGCCTAAAATAATAATTACCGGGAATGCGCCTTaGCGACCAGGATCTCCATCA +
Preference number: 5 (lower is better)
Translates to: AGLWTSEAAVHWPPKIIITGNAP*RPGSPS
Trigger: TGATGGAGATCCTGGTCGCAAAGGCGCATTCCCGGT...AATTATTATTTTAGGCGGCCAGTGAACTGCTGCTTCAGAAGTCCATAGCCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS TCA 90 bp AGCAATCCAAAAATATCTCTCGTTTTGACGGCCTCGCAAAGACTGTaGAGCTTCGCCGCGTTATCCGCGTGCTTCTTCCTTGCGTATCTC +
Preference number: 5 (lower is better)
Translates to: SNPKISLVLTASQRL*SFAALSACFFLAYL
Trigger: GAGATACGCAAGGAAGAAGCACGCGGATAACGCGGCGAAGCTTCACAGTCTTTGCGAGGCCGTCAAAACGAGAGATATTTTTGGATTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS TCA 90 bp CACCATCAGCATAAGCTTGGAGCAATCCAAAAATATCTCTCGTTTTaGCGGCCTCGCAAAGACTGTGAAGCTTCGCCGCGTTATCCGCGT +
Preference number: 5 (lower is better)
Translates to: HHQHKLGAIQKYLSF*RPRKDCEASPRYPR
Trigger: ACGCGGATAACGCGGCGAAGCTTCACAGTCTTTGCGAGGCCGTCAAAACGAGAGATATTTTTGGATTGCTCCAAGCTTATGCTGATGGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS GCA 90 bp ACACTGAGAACTTCAGGAACGCACTTCCTAAATCTGGGTCATCTCTaGATACACAGTTGCCGCCAAACTTCTCCAGAGCCTGGGTGTACT +
Preference number: 5 (lower is better)
Translates to: TLRTSGTHFLNLGHL*IHSCRQTSPEPGCT
Trigger: AGTACACCCAGGCTCTGGAGAAGTTTGGCGGCAACTGTGTATGCAGAGATGACCCAGATTTAGGAAGTGCGTTCCTGAAGTTCTCAGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CAA 90 bp ACAGCATGGTCTGCGCCACAGAATTCTACTGTGTACAGTTGCTTTCTGTGTGACGCCAGCCCAGAGCTGTaGATTGCTTTCACGGATTTC +
Preference number: 5 (lower is better)
Translates to: TAWSAPQNSTVYSCFLCDASPEL*IAFTDF
Trigger: GAAATCCGTGAAAGCAATCAACAGCTCTGGGCTGGC...GTCACACAGAAAGCAACTGTACACAGTAGAATTCTGTGGCGCAGACCATGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CAA 90 bp CTACTGTGTACAGTTGCTTTCTGTGTGACTCAGGAAGTTCAAGAAGGCAAATTCTGGCAGGTTAGCAGGTaGAGCTTTGCAGGAGGCCGG +
Preference number: 5 (lower is better)
Translates to: LLCTVAFCVTQEVQEGKFWQVSR*SFAGGR
Trigger: CCGGCCTCCTGCAAAGCTCAACCTGCTAACCTGCCA...GAATTTGCCTTCTTGAACTTCCTGAGTCACACAGAAAGCAACTGTACACAGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CAA 90 bp GCTGGGCTATGGACTTCTGAAGCAGCAGTTCACTGGCCGCCTAAAATAATAATTGTCAGGATGCCCAGGTaGGTGGAAAGCCATGTAGGA +
Preference number: 5 (lower is better)
Translates to: AGLWTSEAAVHWPPKIIIVRMPR*VESHVG
Trigger: TCCTACATGGCTTTCCACCAACCTGGGCATCCTGAC...AATTATTATTTTAGGCGGCCAGTGAACTGCTGCTTCAGAAGTCCATAGCCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CAA 90 bp CGCCACAGAATTCTACTGTGTACAGTTGCTTTCTGTGTGACTCAGGAAGTTCAACTGCCTGGGTTGGGTTaGACTGAGTCCTCAGCTGGT +
Preference number: 5 (lower is better)
Translates to: RHRILLCTVAFCVTQEVQLPGLG*TESSAG
Trigger: ACCAGCTGAGGACTCAGTCAAACCCAACCCAGGCAG...TTGAACTTCCTGAGTCACACAGAAAGCAACTGTACACAGTAGAATTCTGTGGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CAA 90 bp CGCCACAGAATTCTACTGTGTACAGTTGCTTTCTGTGTGACTCAGGAAGTTCAACTCGGTTGGCCTTTGTaGGTCAGTGGGGTGGACTTG +
Preference number: 5 (lower is better)
Translates to: RHRILLCTVAFCVTQEVQLGWPL*VSGVDL
Trigger: CAAGTCCACCCCACTGACCAACAAAGGCCAACCGAG...TTGAACTTCCTGAGTCACACAGAAAGCAACTGTACACAGTAGAATTCTGTGGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CAA 90 bp GGCATTAGAGAACATGGGCTGCCATACAAACAGTTCATGAAACTGGTTATCTGGCTCGGTTGGCCTTTGTaGGTCAGTGGGGTGGACTTG +
Preference number: 5 (lower is better)
Translates to: GIREHGLPYKQFMKLVIWLGWPL*VSGVDL
Trigger: CAAGTCCACCCCACTGACCAACAAAGGCCAACCGAG...CCAGATAACCAGTTTCATGAACTGTTTGTATGGCAGCCCATGTTCTCTAATGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CAA 90 bp CGCCACAGAATTCTACTGTGTACAGTTGCTTTCTGTGTGACTCAGGAAGTTCAACACAGGTCCTCTCGGTaGGCCTTTGTTGGTCAGTGG +
Preference number: 5 (lower is better)
Translates to: RHRILLCTVAFCVTQEVQHRSSR*AFVGQW
Trigger: CCACTGACCAACAAAGGCCAACCGAGAGGACCTGTG...TTGAACTTCCTGAGTCACACAGAAAGCAACTGTACACAGTAGAATTCTGTGGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CAA 90 bp GGCATTAGAGAACATGGGCTGCCATACAAACAGTTCATGAAACTGGTTATCTGGGACCCAGAGCTTCCGTaGCAGAGAGATCCACAGGTC +
Preference number: 5 (lower is better)
Translates to: GIREHGLPYKQFMKLVIWDPELP*QRDPQV
Trigger: GACCTGTGGATCTCTCTGCAACGGAAGCTCTGGGTC...CCAGATAACCAGTTTCATGAACTGTTTGTATGGCAGCCCATGTTCTCTAATGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CAA 90 bp GATGTGTTAATACAGCATGGTCTGCGCCACAGAATTCTACTGTGTACAGTTGCTACCGGGAATGCGCCTTaGCGACCAGGATCTCCATCA +
Preference number: 5 (lower is better)
Translates to: DVLIQHGLRHRILLCTVATGNAP*RPGSPS
Trigger: TGATGGAGATCCTGGTCGCAAAGGCGCATTCCCGGT...AGCAACTGTACACAGTAGAATTCTGTGGCGCAGACCATGCTGTATTAACACATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS GCA 90 bp TCAGGAACGCACTTCCTAAATCTGGGTCATCTCTGCATACACAGTTaGCGCCAAACTTCTCCAGAGCCTGGGTGTACTGCTCTTCATTTT +
Preference number: 5 (lower is better)
Translates to: SGTHFLNLGHLCIHS*RQTSPEPGCTALHF
Trigger: AAAATGAAGAGCAGTACACCCAGGCTCTGGAGAAGTTTGGCGGCAACTGTGTATGCAGAGATGACCCAGATTTAGGAAGTGCGTTCCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS GCA 90 bp TGGCAGCCCTGGATAAATGGGTTCTGGAGAGTCAGCATTTTCATCTaGAAAAGGTGTGACACAAGATCCGTCAACTCCAGAGCTAAGGAC +
Preference number: 5 (lower is better)
Translates to: WQPWINGFWRVSIFI*KRCDTRSVNSRAKD
Trigger: GTCCTTAGCTCTGGAGTTGACGGATCTTGTGTCACACCTTTTGCAGATGAAAATGCTGACTCTCCAGAACCCATTTATCCAGGGCTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484590.1
CDS-3UTR CAA 90 bp AGAAAGTTCAGAGCTGGGCTATGGACTTCTGAAGCAGCAGTTCACTGGCCGCCTCTCCTTTGTCAGTTCTaGGACGATGTTATTTTCTCC +
Preference number: 5 (lower is better)
Translates to: RKFRAGLWTSEAAVHWPPLLCQF*DDVIFS
Trigger: GGAGAAAATAACATCGTCCAAGAACTGACAAAGGAG...AGGCGGCCAGTGAACTGCTGCTTCAGAAGTCCATAGCCCAGCTCTGAACTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CAA 90 bp GGCATTAGAGAACATGGGCTGCCATACAAACAGTTCATGAAACTGGTTATCTGGTCACAGCAGACGTCATaGCCCGTCATCCTCTGCACT +
Preference number: 5 (lower is better)
Translates to: GIREHGLPYKQFMKLVIWSQQTS*PVILCT
Trigger: AGTGCAGAGGATGACGGGCAATGACGTCTGCTGTGA...CCAGATAACCAGTTTCATGAACTGTTTGTATGGCAGCCCATGTTCTCTAATGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CAA 90 bp GATGTGTTAATACAGCATGGTCTGCGCCACAGAATTCTACTGTGTACAGTTGCTATGTCGCTGCCTGGGTaGGGTTTGACTGAGTCCTCA +
Preference number: 5 (lower is better)
Translates to: DVLIQHGLRHRILLCTVAMSLPG*GLTESS
Trigger: TGAGGACTCAGTCAAACCCAACCCAGGCAGCGACAT...AGCAACTGTACACAGTAGAATTCTGTGGCGCAGACCATGCTGTATTAACACATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CAA 90 bp GATGTGTTAATACAGCATGGTCTGCGCCACAGAATTCTACTGTGTACAGTTGCTCCGCGTGCTTCTTCCTaGCGTATCTCCTCTCGATGT +
Preference number: 5 (lower is better)
Translates to: DVLIQHGLRHRILLCTVAPRASS*RISSRC
Trigger: ACATCGAGAGGAGATACGCAAGGAAGAAGCACGCGG...AGCAACTGTACACAGTAGAATTCTGTGGCGCAGACCATGCTGTATTAACACATC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CAA 90 bp AACACATTTTTACCCGGAACTTTGAAAGGTAAAAAGCGATTGCTATACAACATCATTACGCTGGGCGTCTaGGCAACGGGTGGGGGCGGC +
Preference number: 5 (lower is better)
Translates to: NTFLPGTLKGKKRLLYNIITLGV*ATGGGG
Trigger: GCCGCCCCCACCCGTTGCCAAGACGCCCAGCGTAAT...GATGTTGTATAGCAATCGCTTTTTACCTTTCAAAGTTCCGGGTAAAAATGTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CAA 90 bp ACAGCATGGTCTGCGCCACAGAATTCTACTGTGTACAGTTGCTTTCTGTGTGACTGTGCTCTGACGAATTaGGGAGTCCTCTTTCTGTTC +
Preference number: 5 (lower is better)
Translates to: TAWSAPQNSTVYSCFLCDCALTN*GVLFLF
Trigger: GAACAGAAAGAGGACTCCCAAATTCGTCAGAGCACA...GTCACACAGAAAGCAACTGTACACAGTAGAATTCTGTGGCGCAGACCATGCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CAA 90 bp CTACTGTGTACAGTTGCTTTCTGTGTGACTCAGGAAGTTCAAGAAGGCAAATTCGTCAGGATGCCCAGGTaGGTGGAAAGCCATGTAGGA +
Preference number: 5 (lower is better)
Translates to: LLCTVAFCVTQEVQEGKFVRMPR*VESHVG
Trigger: TCCTACATGGCTTTCCACCAACCTGGGCATCCTGAC...GAATTTGCCTTCTTGAACTTCCTGAGTCACACAGAAAGCAACTGTACACAGTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CAA 90 bp ACAGCATGGTCTGCGCCACAGAATTCTACTGTGTACAGTTGCTTTCTGTGTGACATGCAGTTAACAGCATaGCTGCCTCACTTTCCAAGC +
Preference number: 5 (lower is better)
Translates to: TAWSAPQNSTVYSCFLCDMQLTA*LPHFPS
Trigger: GCTTGGAAAGTGAGGCAGCAATGCTGTTAACTGCAT...GTCACACAGAAAGCAACTGTACACAGTAGAATTCTGTGGCGCAGACCATGCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CAA 90 bp GGCATTAGAGAACATGGGCTGCCATACAAACAGTTCATGAAACTGGTTATCTGGTCTCTGCATACACAGTaGCCGCCAAACTTCTCCAGA +
Preference number: 5 (lower is better)
Translates to: GIREHGLPYKQFMKLVIWSLHTQ*PPNFSR
Trigger: TCTGGAGAAGTTTGGCGGCAACTGTGTATGCAGAGA...CCAGATAACCAGTTTCATGAACTGTTTGTATGGCAGCCCATGTTCTCTAATGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CAA 90 bp ACAGCATGGTCTGCGCCACAGAATTCTACTGTGTACAGTTGCTTTCTGTGTGACAAAATATCTCTCGTTTaGACGGCCTCGCAAAGACTG +
Preference number: 5 (lower is better)
Translates to: TAWSAPQNSTVYSCFLCDKISLV*TASQRL
Trigger: CAGTCTTTGCGAGGCCGTCAAAACGAGAGATATTTT...GTCACACAGAAAGCAACTGTACACAGTAGAATTCTGTGGCGCAGACCATGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CAA 90 bp GAACCTGACAGATTAGTTTGGGACTGGAGTTCTAATGTTGATATGAATCAACTTCCTCTCGGTTGGCCTTaGTTGGTCAGTGGGGTGGAC +
Preference number: 5 (lower is better)
Translates to: EPDRLVWDWSSNVDMNQLPLGWP*LVSGVD
Trigger: GTCCACCCCACTGACCAACAAAGGCCAACCGAGAGG...AAGTTGATTCATATCAACATTAGAACTCCAGTCCCAAACTAATCTGTCAGGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS TCA 90 bp AGTCACAGCAGACGTCATTGCCCGTCATCCTCTGCACTTCTGAGATaGTCTCCTTTGTCAGTTCTTGGACGATGTTATTTTCTCCAGTAT +
Preference number: 5 (lower is better)
Translates to: SHSRRHCPSSSALLR*SPLSVLGRCYFLQY
Trigger: ATACTGGAGAAAATAACATCGTCCAAGAACTGACAAAGGAGATCATCTCAGAAGTGCAGAGGATGACGGGCAATGACGTCTGCTGTGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281419.8
ENST00000315273.4
ENST00000641030.1
CDS-3UTR CAA 90 bp GATGTGTTAATACAGCATGGTCTGCGCCACAGAATTCTACTGTGTACAGTTGCTTGTGCTCTGACGAATTaGGGAGTCCTCTTTCTGTTC +
Preference number: 5 (lower is better)
Translates to: DVLIQHGLRHRILLCTVACALTN*GVLFLF
Trigger: GAACAGAAAGAGGACTCCCAAATTCGTCAGAGCACA...AGCAACTGTACACAGTAGAATTCTGTGGCGCAGACCATGCTGTATTAACACATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CAA 90 bp GAACCTGACAGATTAGTTTGGGACTGGAGTTCTAATGTTGATATGAATCAACTTTCACAGTGCTCGTGCTaGAGGCGCTTGGCAATGTCC +
Preference number: 5 (lower is better)
Translates to: EPDRLVWDWSSNVDMNQLSQCSC*RRLAMS
Trigger: GGACATTGCCAAGCGCCTCAAGCACGAGCACTGTGA...AAGTTGATTCATATCAACATTAGAACTCCAGTCCCAAACTAATCTGTCAGGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CAA 90 bp ACTTTTGTTAAAAGTCCAAGTGGGTATCATATGCCTATTTATTCTCAGAGTGCCGGGGTCAGGGGATCTTaGCCAACATTCCGTGGAGGA +
Preference number: 5 (lower is better)
Translates to: TFVKSPSGYHMPIYSQSAGVRGS*PTFRGG
Trigger: TCCTCCACGGAATGTTGGCAAAGATCCCCTGACCCC...GGCACTCTGAGAATAAATAGGCATATGATACCCACTTGGACTTTTAACAAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000315273.4
CDS-3UTR CAA 90 bp GAACCTGACAGATTAGTTTGGGACTGGAGTTCTAATGTTGATATGAATCAACTTGACCCAGAGCTTCCGTaGCAGAGAGATCCACAGGTC +
Preference number: 5 (lower is better)
Translates to: EPDRLVWDWSSNVDMNQLDPELP*QRDPQV
Trigger: GACCTGTGGATCTCTCTGCAACGGAAGCTCTGGGTC...AAGTTGATTCATATCAACATTAGAACTCCAGTCCCAAACTAATCTGTCAGGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CAA 90 bp ACTTTTGTTAAAAGTCCAAGTGGGTATCATATGCCTATTTATTCTCAGAGTGCCTCACAGCAGACGTCATaGCCCGTCATCCTCTGCACT +
Preference number: 5 (lower is better)
Translates to: TFVKSPSGYHMPIYSQSASQQTS*PVILCT
Trigger: AGTGCAGAGGATGACGGGCAATGACGTCTGCTGTGA...GGCACTCTGAGAATAAATAGGCATATGATACCCACTTGGACTTTTAACAAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CAA 90 bp GAACCTGACAGATTAGTTTGGGACTGGAGTTCTAATGTTGATATGAATCAACTTTGCAGGACCATAGCATaGGACAGAGGACCCAGAGCT +
Preference number: 5 (lower is better)
Translates to: EPDRLVWDWSSNVDMNQLCRTIA*DRGPRA
Trigger: AGCTCTGGGTCCTCTGTCCAATGCTATGGTCCTGCA...AAGTTGATTCATATCAACATTAGAACTCCAGTCCCAAACTAATCTGTCAGGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CAA 90 bp CTACTGTGTACAGTTGCTTTCTGTGTGACTCAGGAAGTTCAAGAAGGCAAATTCATGCAGTTAACAGCATaGCTGCCTCACTTTCCAAGC +
Preference number: 5 (lower is better)
Translates to: LLCTVAFCVTQEVQEGKFMQLTA*LPHFPS
Trigger: GCTTGGAAAGTGAGGCAGCAATGCTGTTAACTGCAT...GAATTTGCCTTCTTGAACTTCCTGAGTCACACAGAAAGCAACTGTACACAGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CAA 90 bp GCTGGGCTATGGACTTCTGAAGCAGCAGTTCACTGGCCGCCTAAAATAATAATTTTAATCTTGATTTCGTaGACCTTCAGCAGATACTCG +
Preference number: 5 (lower is better)
Translates to: AGLWTSEAAVHWPPKIIILILIS*TFSRYS
Trigger: CGAGTATCTGCTGAAGGTCAACGAAATCAAGATTAA...AATTATTATTTTAGGCGGCCAGTGAACTGCTGCTTCAGAAGTCCATAGCCCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CAA 90 bp CTACTGTGTACAGTTGCTTTCTGTGTGACTCAGGAAGTTCAAGAAGGCAAATTCAAAATATCTCTCGTTTaGACGGCCTCGCAAAGACTG +
Preference number: 5 (lower is better)
Translates to: LLCTVAFCVTQEVQEGKFKISLV*TASQRL
Trigger: CAGTCTTTGCGAGGCCGTCAAAACGAGAGATATTTT...GAATTTGCCTTCTTGAACTTCCTGAGTCACACAGAAAGCAACTGTACACAGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CAA 90 bp GCTGGGCTATGGACTTCTGAAGCAGCAGTTCACTGGCCGCCTAAAATAATAATTACCATCAGCATAAGCTaGGAGCAATCCAAAAATATC +
Preference number: 5 (lower is better)
Translates to: AGLWTSEAAVHWPPKIIITISIS*EQSKNI
Trigger: GATATTTTTGGATTGCTCCAAGCTTATGCTGATGGT...AATTATTATTTTAGGCGGCCAGTGAACTGCTGCTTCAGAAGTCCATAGCCCAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CAA 90 bp GAACCTGACAGATTAGTTTGGGACTGGAGTTCTAATGTTGATATGAATCAACTTTCTCCTTGGCAAGGTTaGCAGCATCTCTGGCCAAAG +
Preference number: 5 (lower is better)
Translates to: EPDRLVWDWSSNVDMNQLSPWQG*QHLWPK
Trigger: CTTTGGCCAGAGATGCTGCAAACCTTGCCAAGGAGA...AAGTTGATTCATATCAACATTAGAACTCCAGTCCCAAACTAATCTGTCAGGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CAA 90 bp AACACATTTTTACCCGGAACTTTGAAAGGTAAAAAGCGATTGCTATACAACATCTGCAGGACCATAGCATaGGACAGAGGACCCAGAGCT +
Preference number: 5 (lower is better)
Translates to: NTFLPGTLKGKKRLLYNICRTIA*DRGPRA
Trigger: AGCTCTGGGTCCTCTGTCCAATGCTATGGTCCTGCA...GATGTTGTATAGCAATCGCTTTTTACCTTTCAAAGTTCCGGGTAAAAATGTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS GCA 90 bp ACGAATTTGGGAGTCTCTCCTAGACTCTTTCTGTTCAACCTGCAATaGGGATTTCAAAATATCTCGAAGCTGTATCAACTGCCTTCTTTC +
Preference number: 5 (lower is better)
Translates to: TNLGVSPRLFLFNLQ*GFQNISKLYQLPSF
Trigger: GAAAGAAGGCAGTTGATACAGCTTCGAGATATTTTGAAATCCGCATTGCAGGTTGAACAGAAAGAGTCTAGGAGAGACTCCCAAATTCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641030.1
CDS-3UTR CAA 90 bp CGCCACAGAATTCTACTGTGTACAGTTGCTTTCTGTGTGACTCAGGAAGTTCAATTAATCTTGATTTCGTaGACCTTCAGCAGATACTCG +
Preference number: 5 (lower is better)
Translates to: RHRILLCTVAFCVTQEVQLILIS*TFSRYS
Trigger: CGAGTATCTGCTGAAGGTCAACGAAATCAAGATTAA...TTGAACTTCCTGAGTCACACAGAAAGCAACTGTACACAGTAGAATTCTGTGGCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CAA 90 bp CGCCACAGAATTCTACTGTGTACAGTTGCTTTCTGTGTGACTCAGGAAGTTCAAACTCCCTTTTTAATCTaGATTTCGTTGACCTTCAGC +
Preference number: 5 (lower is better)
Translates to: RHRILLCTVAFCVTQEVQTPFLI*ISLTFS
Trigger: GCTGAAGGTCAACGAAATCAAGATTAAAAAGGGAGT...TTGAACTTCCTGAGTCACACAGAAAGCAACTGTACACAGTAGAATTCTGTGGCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CAA 90 bp GATGTGTTAATACAGCATGGTCTGCGCCACAGAATTCTACTGTGTACAGTTGCTACTCCCTTTTTAATCTaGATTTCGTTGACCTTCAGC +
Preference number: 5 (lower is better)
Translates to: DVLIQHGLRHRILLCTVATPFLI*ISLTFS
Trigger: GCTGAAGGTCAACGAAATCAAGATTAAAAAGGGAGT...AGCAACTGTACACAGTAGAATTCTGTGGCGCAGACCATGCTGTATTAACACATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CAA 90 bp GGCATTAGAGAACATGGGCTGCCATACAAACAGTTCATGAAACTGGTTATCTGGCACAGACATCCATATTaGACATTCCTGTTCATCTTC +
Preference number: 5 (lower is better)
Translates to: GIREHGLPYKQFMKLVIWHRHPY*TFLFIF
Trigger: GAAGATGAACAGGAATGTCAAATATGGATGTCTGTG...CCAGATAACCAGTTTCATGAACTGTTTGTATGGCAGCCCATGTTCTCTAATGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CAA 90 bp CTACTGTGTACAGTTGCTTTCTGTGTGACTCAGGAAGTTCAAGAAGGCAAATTCCTCCTTTGTCAGTTCTaGGACGATGTTATTTTCTCC +
Preference number: 5 (lower is better)
Translates to: LLCTVAFCVTQEVQEGKFLLCQF*DDVIFS
Trigger: GGAGAAAATAACATCGTCCAAGAACTGACAAAGGAG...GAATTTGCCTTCTTGAACTTCCTGAGTCACACAGAAAGCAACTGTACACAGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CAA 90 bp GAACCTGACAGATTAGTTTGGGACTGGAGTTCTAATGTTGATATGAATCAACTTGCATTCCCAATATTCTaGGCGAGCAGCAGCTCAGAT +
Preference number: 5 (lower is better)
Translates to: EPDRLVWDWSSNVDMNQLAFPIF*ASSSSD
Trigger: ATCTGAGCTGCTGCTCGCCAAGAATATTGGGAATGC...AAGTTGATTCATATCAACATTAGAACTCCAGTCCCAAACTAATCTGTCAGGTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CAA 90 bp AACACATTTTTACCCGGAACTTTGAAAGGTAAAAAGCGATTGCTATACAACATCTCTCCTTGGCAAGGTTaGCAGCATCTCTGGCCAAAG +
Preference number: 5 (lower is better)
Translates to: NTFLPGTLKGKKRLLYNISPWQG*QHLWPK
Trigger: CTTTGGCCAGAGATGCTGCAAACCTTGCCAAGGAGA...GATGTTGTATAGCAATCGCTTTTTACCTTTCAAAGTTCCGGGTAAAAATGTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CAA 90 bp GGCATTAGAGAACATGGGCTGCCATACAAACAGTTCATGAAACTGGTTATCTGGTATCTGGCAAGAGTTTaGGTACCAATAACGAAACAG +
Preference number: 5 (lower is better)
Translates to: GIREHGLPYKQFMKLVIWYLARV*VPITKQ
Trigger: CTGTTTCGTTATTGGTACCAAAACTCTTGCCAGATA...CCAGATAACCAGTTTCATGAACTGTTTGTATGGCAGCCCATGTTCTCTAATGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CAA 90 bp GCTGGGCTATGGACTTCTGAAGCAGCAGTTCACTGGCCGCCTAAAATAATAATTTTTTCAGTTCACCTGTaGGGAAATTCAGTTTTTCCT +
Preference number: 5 (lower is better)
Translates to: AGLWTSEAAVHWPPKIIIFSVHL*GNSVFP
Trigger: AGGAAAAACTGAATTTCCCAACAGGTGAACTGAAAA...AATTATTATTTTAGGCGGCCAGTGAACTGCTGCTTCAGAAGTCCATAGCCCAGC
42% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CAA 90 bp GCTGGGCTATGGACTTCTGAAGCAGCAGTTCACTGGCCGCCTAAAATAATAATTAAACTCTACACAGTCTaGCATAATAAAGACAAGCTG +
Preference number: 5 (lower is better)
Translates to: AGLWTSEAAVHWPPKIIIKLYTV*HNKDKL
Trigger: CAGCTTGTCTTTATTATGCAAGACTGTGTAGAGTTT...AATTATTATTTTAGGCGGCCAGTGAACTGCTGCTTCAGAAGTCCATAGCCCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CAA 90 bp GAACCTGACAGATTAGTTTGGGACTGGAGTTCTAATGTTGATATGAATCAACTTGTTTCAATGGAAGGTTaGAGGCTTTCCACGGCTTTG +
Preference number: 5 (lower is better)
Translates to: EPDRLVWDWSSNVDMNQLVSMEG*RLSTAL
Trigger: CAAAGCCGTGGAAAGCCTCAAACCTTCCATTGAAAC...AAGTTGATTCATATCAACATTAGAACTCCAGTCCCAAACTAATCTGTCAGGTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CAA 90 bp GGCATTAGAGAACATGGGCTGCCATACAAACAGTTCATGAAACTGGTTATCTGGTTTTCAGTTCACCTGTaGGGAAATTCAGTTTTTCCT +
Preference number: 5 (lower is better)
Translates to: GIREHGLPYKQFMKLVIWFSVHL*GNSVFP
Trigger: AGGAAAAACTGAATTTCCCAACAGGTGAACTGAAAA...CCAGATAACCAGTTTCATGAACTGTTTGTATGGCAGCCCATGTTCTCTAATGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CAA 90 bp CGCCACAGAATTCTACTGTGTACAGTTGCTTTCTGTGTGACTCAGGAAGTTCAAAAACTCTACACAGTCTaGCATAATAAAGACAAGCTG +
Preference number: 5 (lower is better)
Translates to: RHRILLCTVAFCVTQEVQKLYTV*HNKDKL
Trigger: CAGCTTGTCTTTATTATGCAAGACTGTGTAGAGTTT...TTGAACTTCCTGAGTCACACAGAAAGCAACTGTACACAGTAGAATTCTGTGGCG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CAA 90 bp GGCATTAGAGAACATGGGCTGCCATACAAACAGTTCATGAAACTGGTTATCTGGTTTTTACCCGGAACTTaGAAAGGTAAAAAGCGATTG +
Preference number: 5 (lower is better)
Translates to: GIREHGLPYKQFMKLVIWFLPGT*KGKKRL
Trigger: CAATCGCTTTTTACCTTTCAAAGTTCCGGGTAAAAA...CCAGATAACCAGTTTCATGAACTGTTTGTATGGCAGCCCATGTTCTCTAATGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CAA 90 bp CTACTGTGTACAGTTGCTTTCTGTGTGACTCAGGAAGTTCAAGAAGGCAAATTCTTATTTTCTCCAGTATaGTCATCCCCCTTAAATGCA +
Preference number: 5 (lower is better)
Translates to: LLCTVAFCVTQEVQEGKFLFSPV*SSPLNA
Trigger: TGCATTTAAGGGGGATGACAATACTGGAGAAAATAA...GAATTTGCCTTCTTGAACTTCCTGAGTCACACAGAAAGCAACTGTACACAGTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CAA 90 bp GAACCTGACAGATTAGTTTGGGACTGGAGTTCTAATGTTGATATGAATCAACTTCTGTTCATCTTCAGCTaGAAAGTGGTAAGTTCTGTC +
Preference number: 5 (lower is better)
Translates to: EPDRLVWDWSSNVDMNQLLFIFS*KVVSSV
Trigger: GACAGAACTTACCACTTTCAAGCTGAAGATGAACAG...AAGTTGATTCATATCAACATTAGAACTCCAGTCCCAAACTAATCTGTCAGGTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CAA 90 bp ACTTTTGTTAAAAGTCCAAGTGGGTATCATATGCCTATTTATTCTCAGAGTGCCCACAGACATCCATATTaGACATTCCTGTTCATCTTC +
Preference number: 5 (lower is better)
Translates to: TFVKSPSGYHMPIYSQSAHRHPY*TFLFIF
Trigger: GAAGATGAACAGGAATGTCAAATATGGATGTCTGTG...GGCACTCTGAGAATAAATAGGCATATGATACCCACTTGGACTTTTAACAAAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CAA 90 bp GAACCTGACAGATTAGTTTGGGACTGGAGTTCTAATGTTGATATGAATCAACTTTATCTGGCAAGAGTTTaGGTACCAATAACGAAACAG +
Preference number: 5 (lower is better)
Translates to: EPDRLVWDWSSNVDMNQLYLARV*VPITKQ
Trigger: CTGTTTCGTTATTGGTACCAAAACTCTTGCCAGATA...AAGTTGATTCATATCAACATTAGAACTCCAGTCCCAAACTAATCTGTCAGGTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CAA 90 bp AACACATTTTTACCCGGAACTTTGAAAGGTAAAAAGCGATTGCTATACAACATCACCATCAGCATAAGCTaGGAGCAATCCAAAAATATC +
Preference number: 5 (lower is better)
Translates to: NTFLPGTLKGKKRLLYNITISIS*EQSKNI
Trigger: GATATTTTTGGATTGCTCCAAGCTTATGCTGATGGT...GATGTTGTATAGCAATCGCTTTTTACCTTTCAAAGTTCCGGGTAAAAATGTGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CAA 90 bp AACACATTTTTACCCGGAACTTTGAAAGGTAAAAAGCGATTGCTATACAACATCTTATTTTCTCCAGTATaGTCATCCCCCTTAAATGCA +
Preference number: 5 (lower is better)
Translates to: NTFLPGTLKGKKRLLYNILFSPV*SSPLNA
Trigger: TGCATTTAAGGGGGATGACAATACTGGAGAAAATAA...GATGTTGTATAGCAATCGCTTTTTACCTTTCAAAGTTCCGGGTAAAAATGTGTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS-3UTR CAA 90 bp AACACATTTTTACCCGGAACTTTGAAAGGTAAAAAGCGATTGCTATACAACATCTTTTTACCCGGAACTTaGAAAGGTAAAAAGCGATTG +
Preference number: 5 (lower is better)
Translates to: NTFLPGTLKGKKRLLYNIFLPGT*KGKKRL
Trigger: CAATCGCTTTTTACCTTTCAAAGTTCCGGGTAAAAA...GATGTTGTATAGCAATCGCTTTTTACCTTTCAAAGTTCCGGGTAAAAATGTGTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS GCA 72 bp AAAGCCTCCTCGATGGCCGCCACAGTGTTCCGGCACTaGGCCGTGCGGGTGGTGAAGCTGGAGGCCGTGGGC +
Preference number: 6 (lower is better)
Translates to: KASSMAATVFRH*AVRVVKLEAVG
Trigger: GCCCACGGCCTCCAGCTTCACCACCCGCACGGCGCAGTGCCGGAACACTGTGGCGGCCATCGAGGAGGCTTT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS CCA 72 bp TCATGGGTCTCGGCCACGAATTCCGACACGGAGATCTaGTCCGGCATCGCCTCGGCGCGAGGGCGCTGGCGC +
Preference number: 6 (lower is better)
Translates to: SWVSATNSDTEI*SGIASARGRWR
Trigger: GCGCCAGCGCCCTCGCGCCGAGGCGATGCCGGACCAGATCTCCGTGTCGGAATTCGTGGCCGAGACCCATGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS CCA 72 bp CAGGCTTGCTCGGCTGGCTCAAGGCTTCCATTACGCTaGGCGTCTTGGCAACGGGTGGGGGCGGCGTGGGGG +
Preference number: 6 (lower is better)
Translates to: QACSAGSRLPLR*ASWQRVGAAWG
Trigger: CCCCCACGCCGCCCCCACCCGTTGCCAAGACGCCCAGCGTAATGGAAGCCTTGAGCCAGCCGAGCAAGCCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281419.8
ENST00000315273.4
ENST00000491413.1
CDS CCA 72 bp GCCCAGATGGCTTTGCCAGGACGGGTCCGAGCACTCTaGGTCAGCGCTGTCCATGCCTCTGCCGTCCCTGCT +
Preference number: 6 (lower is better)
Translates to: AQMALPGRVRAL*VSAVHASAVPA
Trigger: AGCAGGGACGGCAGAGGCATGGACAGCGCTGACCCAGAGTGCTCGGACCCGTCCTGGCAAAGCCATCTGGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484590.1
CDS CAA 72 bp GGGGGCCTGATCTGTGAGATCCCAGGCGGGGCAGGCTaGCTCGGCTGGCTCAAGGCTTCCATTACGCTGGGC +
Preference number: 6 (lower is better)
Translates to: GGLICEIPGGAG*LGWLKASITLG
Trigger: GCCCAGCGTAATGGAAGCCTTGAGCCAGCCGAGCAAGCCTGCCCCGCCTGGGATCTCACAGATCAGGCCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000281419.8
ENST00000315273.4
ENST00000491413.1
CDS CAA 90 bp GGCAGAGGTGGGGGCCTGATCTGTGAGATCCCAGGCGGGGCAGGCTaGCTCGGCTGGCTCAAGGCTTCCATTACGCTGGGCGTCTTGGCA +
Preference number: 6 (lower is better)
Translates to: GRGGGLICEIPGGAG*LGWLKASITLGVLA
Trigger: TGCCAAGACGCCCAGCGTAATGGAAGCCTTGAGCCAGCCGAGCAAGCCTGCCCCGCCTGGGATCTCACAGATCAGGCCCCCACCTCTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000281419.8
ENST00000315273.4
ENST00000491413.1
CDS CCA 72 bp GGTCAGCGCTGTCCATGCCTCTGCCGTCCCTGCTTCTaGGAACCAATGTGGCTGACCACGGGCTCAAGCCCC +
Preference number: 6 (lower is better)
Translates to: GQRCPCLCRPCF*EPMWLTTGSSP
Trigger: GGGGCTTGAGCCCGTGGTCAGCCACATTGGTTCCCAGAAGCAGGGACGGCAGAGGCATGGACAGCGCTGACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484590.1
CDS TCA 72 bp AAGAGGGGGCAGCGGTGGATGGACAGCTGGCGGATCTaGCGAAGATCGCTGCCGGCTTCCACCGTCCACACT +
Preference number: 6 (lower is better)
Translates to: KRGQRWMDSWRI*RRSLPASTVHT
Trigger: AGTGTGGACGGTGGAAGCCGGCAGCGATCTTCGTCAGATCCGCCAGCTGTCCATCCACCGCTGCCCCCTCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281419.8
CDS GCA 72 bp GGTCCGAGCACTCTGGGTCAGCGCTGTCCATGCCTCTaGCGTCCCTGCTTCTGGGAACCAATGTGGCTGACC +
Preference number: 6 (lower is better)
Translates to: GPSTLGQRCPCL*RPCFWEPMWLT
Trigger: GGTCAGCCACATTGGTTCCCAGAAGCAGGGACGGCAGAGGCATGGACAGCGCTGACCCAGAGTGCTCGGACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484590.1
CDS GCA 72 bp GCAGGGCTGAACCTTAACCTCAGGCCCAGATGGCTTTaGCAGGACGGGTCCGAGCACTCTGGGTCAGCGCTG +
Preference number: 6 (lower is better)
Translates to: AGLNLNLRPRWL*QDGSEHSGSAL
Trigger: CAGCGCTGACCCAGAGTGCTCGGACCCGTCCTGGCAAAGCCATCTGGGCCTGAGGTTAAGGTTCAGCCCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484590.1
CDS TCA 72 bp GCCTCTGCCGTCCCTGCTTCTGGGAACCAATGTGGCTaGCCACGGGCTCAAGCCCCATCCATGAACCTCTGG +
Preference number: 6 (lower is better)
Translates to: ASAVPASGNQCG*PRAQAPSMNLW
Trigger: CCAGAGGTTCATGGATGGGGCTTGAGCCCGTGGTCAGCCACATTGGTTCCCAGAAGCAGGGACGGCAGAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484590.1
CDS CCA 72 bp ATCTGTGAGATCCCAGGCGGGGCAGGCTTGCTCGGCTaGCTCAAGGCTTCCATTACGCTGGGCGTCTTGGCA +
Preference number: 6 (lower is better)
Translates to: ICEIPGGAGLLG*LKASITLGVLA
Trigger: TGCCAAGACGCCCAGCGTAATGGAAGCCTTGAGCCAGCCGAGCAAGCCTGCCCCGCCTGGGATCTCACAGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281419.8
ENST00000315273.4
ENST00000491413.1
CDS CCA 72 bp TTGGTAGATGTCACGCGAAGAGGGGGCAGCGGTGGATaGACAGCTGGCGGATCTGACGAAGATCGCTGCCGG +
Preference number: 6 (lower is better)
Translates to: LVDVTRRGGSGG*TAGGSDEDRCR
Trigger: CCGGCAGCGATCTTCGTCAGATCCGCCAGCTGTCCATCCACCGCTGCCCCCTCTTCGCGTGACATCTACCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281419.8
CDS CAA 72 bp GCAGAGAGATCCACAGGTCCTCTCGGTTGGCCTTTGTaGGTCAGTGGGGTGGACTTGTCAGCCCCCGGCGCA +
Preference number: 6 (lower is better)
Translates to: AERSTGPLGWPL*VSGVDLSAPGA
Trigger: TGCGCCGGGGGCTGACAAGTCCACCCCACTGACCAACAAAGGCCAACCGAGAGGACCTGTGGATCTCTCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000281419.8
ENST00000315273.4
ENST00000491413.1
CDS CAA 90 bp GCTTCCGTTGCAGAGAGATCCACAGGTCCTCTCGGTTGGCCTTTGTaGGTCAGTGGGGTGGACTTGTCAGCCCCCGGCGCAGGCTTCTTC +
Preference number: 6 (lower is better)
Translates to: ASVAERSTGPLGWPL*VSGVDLSAPGAGFF
Trigger: GAAGAAGCCTGCGCCGGGGGCTGACAAGTCCACCCCACTGACCAACAAAGGCCAACCGAGAGGACCTGTGGATCTCTCTGCAACGGAAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000281419.8
ENST00000315273.4
ENST00000491413.1
CDS TCA 72 bp AGGCTTGGGTCAGCAGCTCCTCACAGTGCTCGTGCTTaGGGCGCTTGGCAATGTCCAGCGGAGTCTCTCCTG +
Preference number: 6 (lower is better)
Translates to: RLGSAAPHSARA*GAWQCPAESLL
Trigger: CAGGAGAGACTCCGCTGGACATTGCCAAGCGCCTCAAGCACGAGCACTGTGAGGAGCTGCTGACCCAAGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS GCA 72 bp TCAGGGCTGGCAGAGAGGGGTCCCTCATCTCGAACCTaGCACCTGGCAGCCCTGGATAAATGGGTTCTGGAG +
Preference number: 6 (lower is better)
Translates to: SGLAERGPSSRT*HLAALDKWVLE
Trigger: CTCCAGAACCCATTTATCCAGGGCTGCCAGGTGGCAGGTTCGAGATGAGGGACCCCTCTCTGCCAGCCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484590.1
CDS CCA 72 bp ATCCACAGGTCCTCTCGGTTGGCCTTTGTTGGTCAGTaGGGTGGACTTGTCAGCCCCCGGCGCAGGCTTCTT +
Preference number: 6 (lower is better)
Translates to: IHRSSRLAFVGQ*GGLVSPRRRLL
Trigger: AAGAAGCCTGCGCCGGGGGCTGACAAGTCCACCCCACTGACCAACAAAGGCCAACCGAGAGGACCTGTGGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281419.8
ENST00000315273.4
ENST00000491413.1
CDS CCA 72 bp CCATGCCTCTGCCGTCCCTGCTTCTGGGAACCAATGTaGCTGACCACGGGCTCAAGCCCCATCCATGAACCT +
Preference number: 6 (lower is better)
Translates to: PCLCRPCFWEPM*LTTGSSPIHEP
Trigger: AGGTTCATGGATGGGGCTTGAGCCCGTGGTCAGCCACATTGGTTCCCAGAAGCAGGGACGGCAGAGGCATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484590.1
CDS CCA 72 bp GAAAGGGCAGGGCTGAACCTTAACCTCAGGCCCAGATaGCTTTGCCAGGACGGGTCCGAGCACTCTGGGTCA +
Preference number: 6 (lower is better)
Translates to: ERAGLNLNLRPR*LCQDGSEHSGS
Trigger: TGACCCAGAGTGCTCGGACCCGTCCTGGCAAAGCCATCTGGGCCTGAGGTTAAGGTTCAGCCCTGCCCTTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484590.1
CDS CAA 72 bp GTTGCAGAGAGATCCACAGGTCCTCTCGGTTGGCCTTaGTTGGTCAGTGGGGTGGACTTGTCAGCCCCCGGC +
Preference number: 6 (lower is better)
Translates to: VAERSTGPLGWP*LVSGVDLSAPG
Trigger: GCCGGGGGCTGACAAGTCCACCCCACTGACCAACAAAGGCCAACCGAGAGGACCTGTGGATCTCTCTGCAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000281419.8
ENST00000315273.4
ENST00000491413.1
CDS TCA 72 bp CTATCTCGATGGAGGCCTTCCCCCGCAGGAGCAACTTaGGGCACTCGGCATTGTCGGTCAGGCAGCAGTAGT +
Preference number: 6 (lower is better)
Translates to: LSRWRPSPAGAT*GTRHCRSGSSS
Trigger: ACTACTGCTGCCTGACCGACAATGCCGAGTGCCTCAAGTTGCTCCTGCGGGGGAAGGCCTCCATCGAGATAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS TCA 72 bp GCTCCCGTCTGTCGACACTCCCTTCGCTGCTCGGAATaGACCCTGTCTGGCCTCAATGCTTGCAGTCCCAGA +
Preference number: 6 (lower is better)
Translates to: APVCRHSLRCSE*TLSGLNACSPR
Trigger: TCTGGGACTGCAAGCATTGAGGCCAGACAGGGTTCATTCCGAGCAGCGAAGGGAGTGTCGACAGACGGGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484590.1
CDS CCA 72 bp AGATCCGTCAACTCCAGAGCTAAGGACCAGTGCCAGTaGCTTCAGCTCCCCGGTGGATCTCCTGGACCTAGC +
Preference number: 6 (lower is better)
Translates to: RSVNSRAKDQCQ*LQLPGGSPGPS
Trigger: GCTAGGTCCAGGAGATCCACCGGGGAGCTGAAGCCACTGGCACTGGTCCTTAGCTCTGGAGTTGACGGATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484590.1
CDS CAA 72 bp CTAGGCATGGGTGCAGGGGGCTGCAGGACCATAGCATaGGACAGAGGACCCAGAGCTTCCGTTGCAGAGAGA +
Preference number: 6 (lower is better)
Translates to: LGMGAGGCRTIA*DRGPRASVAER
Trigger: TCTCTCTGCAACGGAAGCTCTGGGTCCTCTGTCCAATGCTATGGTCCTGCAGCCCCCTGCACCCATGCCTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281419.8
ENST00000315273.4
ENST00000484590.1
CDS CAA 72 bp CTCCACAGAGGGCAACTGCCTCCCTGCAAGGGCACCTaGGTGGTCTACACAAACCCACCTGGACAAGAGGAC +
Preference number: 6 (lower is better)
Translates to: LHRGQLPPCKGT*VVYTNPPGQED
Trigger: GTCCTCTTGTCCAGGTGGGTTTGTGTAGACCACCAAGGTGCCCTTGCAGGGAGGCAGTTGCCCTCTGTGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471687.1
CDS CAA 90 bp TGCGACTTCCTAGGCATGGGTGCAGGGGGCTGCAGGACCATAGCATaGGACAGAGGACCCAGAGCTTCCGTTGCAGAGAGATCCACAGGT +
Preference number: 6 (lower is better)
Translates to: CDFLGMGAGGCRTIA*DRGPRASVAERSTG
Trigger: ACCTGTGGATCTCTCTGCAACGGAAGCTCTGGGTCCTCTGTCCAATGCTATGGTCCTGCAGCCCCCTGCACCCATGCCTAGGAAGTCGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281419.8
ENST00000315273.4
ENST00000484590.1
CDS CAA 90 bp AAGGCTTGGGTCAGCAGCTCCTCACAGTGCTCGTGCTTGAGGCGCTaGGCAATGTCCAGCGGAGTCTCTCCTGACTCGTTTGCTATCTCG +
Preference number: 6 (lower is better)
Translates to: KAWVSSSSQCSCLRR*AMSSGVSPDSFAIS
Trigger: CGAGATAGCAAACGAGTCAGGAGAGACTCCGCTGGACATTGCCAAGCGCCTCAAGCACGAGCACTGTGAGGAGCTGCTGACCCAAGCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS TCA 72 bp CTAAAACCAGGGCTTTTCCAGAGCACTCTGTCCACGTaGGCCTGCCACCGATGGCCAGGGTCTGGAGTGATG +
Preference number: 6 (lower is better)
Translates to: LKPGLFQSTLST*ACHRWPGSGVM
Trigger: CATCACTCCAGACCCTGGCCATCGGTGGCAGGCTCACGTGGACAGAGTGCTCTGGAAAAGCCCTGGTTTTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484590.1
CDS GCA 72 bp GATAAGGCTTGGGTCAGCAGCTCCTCACAGTGCTCGTaGTTGAGGCGCTTGGCAATGTCCAGCGGAGTCTCT +
Preference number: 6 (lower is better)
Translates to: DKAWVSSSSQCS*LRRLAMSSGVS
Trigger: AGAGACTCCGCTGGACATTGCCAAGCGCCTCAAGCACGAGCACTGTGAGGAGCTGCTGACCCAAGCCTTATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS GCA 72 bp CTTCCAGATAAGGCTTGGGTCAGCAGCTCCTCACAGTaGTCGTGCTTGAGGCGCTTGGCAATGTCCAGCGGA +
Preference number: 6 (lower is better)
Translates to: LPDKAWVSSSSQ*SCLRRLAMSSG
Trigger: TCCGCTGGACATTGCCAAGCGCCTCAAGCACGAGCACTGTGAGGAGCTGCTGACCCAAGCCTTATCTGGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS GCA 72 bp GGTGGATGGACAGCTGGCGGATCTGACGAAGATCGCTaGCGGCTTCCACCGTCCACACTTACAGAGTTTGTC +
Preference number: 6 (lower is better)
Translates to: GGWTAGGSDEDR*RLPPSTLTEFV
Trigger: GACAAACTCTGTAAGTGTGGACGGTGGAAGCCGGCAGCGATCTTCGTCAGATCCGCCAGCTGTCCATCCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281419.8
CDS GCA 72 bp GACACAAGATCCGTCAACTCCAGAGCTAAGGACCAGTaGCAGTGGCTTCAGCTCCCCGGTGGATCTCCTGGA +
Preference number: 6 (lower is better)
Translates to: DTRSVNSRAKDQ*QWLQLPGGSPG
Trigger: TCCAGGAGATCCACCGGGGAGCTGAAGCCACTGGCACTGGTCCTTAGCTCTGGAGTTGACGGATCTTGTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484590.1
CDS CAA 72 bp GTCAGCAGCTCCTCACAGTGCTCGTGCTTGAGGCGCTaGGCAATGTCCAGCGGAGTCTCTCCTGACTCGTTT +
Preference number: 6 (lower is better)
Translates to: VSSSSQCSCLRR*AMSSGVSPDSF
Trigger: AAACGAGTCAGGAGAGACTCCGCTGGACATTGCCAAGCGCCTCAAGCACGAGCACTGTGAGGAGCTGCTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS CAA 90 bp CTTCCAGATAAGGCTTGGGTCAGCAGCTCCTCACAGTGCTCGTGCTaGAGGCGCTTGGCAATGTCCAGCGGAGTCTCTCCTGACTCGTTT +
Preference number: 6 (lower is better)
Translates to: LPDKAWVSSSSQCSC*RRLAMSSGVSPDSF
Trigger: AAACGAGTCAGGAGAGACTCCGCTGGACATTGCCAAGCGCCTCAAGCACGAGCACTGTGAGGAGCTGCTGACCCAAGCCTTATCTGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS CAA 90 bp GAACTTCATCTCCACAGAGGGCAACTGCCTCCCTGCAAGGGCACCTaGGTGGTCTACACAAACCCACCTGGACAAGAGGACAAGCGATGC +
Preference number: 6 (lower is better)
Translates to: ELHLHRGQLPPCKGT*VVYTNPPGQEDKRC
Trigger: GCATCGCTTGTCCTCTTGTCCAGGTGGGTTTGTGTAGACCACCAAGGTGCCCTTGCAGGGAGGCAGTTGCCCTCTGTGGAGATGAAGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471687.1
CDS CCA 72 bp CTGCAAGGGCACCTTGGTGGTCTACACAAACCCACCTaGACAAGAGGACAAGCGATGCCAGCTTTGAGGCTG +
Preference number: 6 (lower is better)
Translates to: LQGHLGGLHKPT*TRGQAMPALRL
Trigger: CAGCCTCAAAGCTGGCATCGCTTGTCCTCTTGTCCAGGTGGGTTTGTGTAGACCACCAAGGTGCCCTTGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471687.1
CDS CCA 72 bp TCTGCAGACATCACTACACTGACCTGGCTGACCCCCTaGCCGGCAGTCATCCCTAACTACAGAACACTCGCA +
Preference number: 6 (lower is better)
Translates to: SADITTLTWLTP*PAVIPNYRTLA
Trigger: TGCGAGTGTTCTGTAGTTAGGGATGACTGCCGGCCAGGGGGTCAGCCAGGTCAGTGTAGTGATGTCTGCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484590.1
CDS CAA 72 bp GTAGGATCTGGCGCCCCACAGTCACAGCAGACGTCATaGCCCGTCATCCTCTGCACTTCTGAGATGATCTCC +
Preference number: 6 (lower is better)
Translates to: VGSGAPQSQQTS*PVILCTSEMIS
Trigger: GGAGATCATCTCAGAAGTGCAGAGGATGACGGGCAATGACGTCTGCTGTGACTGTGGGGCGCCAGATCCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281419.8
ENST00000315273.4
ENST00000641030.1
CDS GCA 72 bp GACCATAGCATTGGACAGAGGACCCAGAGCTTCCGTTaGAGAGAGATCCACAGGTCCTCTCGGTTGGCCTTT +
Preference number: 6 (lower is better)
Translates to: DHSIGQRTQSFR*REIHRSSRLAF
Trigger: AAAGGCCAACCGAGAGGACCTGTGGATCTCTCTGCAACGGAAGCTCTGGGTCCTCTGTCCAATGCTATGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281419.8
ENST00000315273.4
ENST00000484590.1
CDS GCA 72 bp CAGAGGCCTTTGAACTTCATCTCCACAGAGGGCAACTaGCTCCCTGCAAGGGCACCTTGGTGGTCTACACAA +
Preference number: 6 (lower is better)
Translates to: QRPLNFISTEGN*LPARAPWWSTQ
Trigger: TTGTGTAGACCACCAAGGTGCCCTTGCAGGGAGGCAGTTGCCCTCTGTGGAGATGAAGTTCAAAGGCCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471687.1
CDS CCA 72 bp TCGACACTCCCTTCGCTGCTCGGAATGAACCCTGTCTaGCCTCAATGCTTGCAGTCCCAGAATGAAGGGAGA +
Preference number: 6 (lower is better)
Translates to: STLPSLLGMNPV*PQCLQSQNEGR
Trigger: TCTCCCTTCATTCTGGGACTGCAAGCATTGAGGCCAGACAGGGTTCATTCCGAGCAGCGAAGGGAGTGTCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484590.1
CDS CCA 72 bp GGGGTCCCTCATCTCGAACCTGCCACCTGGCAGCCCTaGATAAATGGGTTCTGGAGAGTCAGCATTTTCATC +
Preference number: 6 (lower is better)
Translates to: GVPHLEPATWQP*INGFWRVSIFI
Trigger: GATGAAAATGCTGACTCTCCAGAACCCATTTATCCAGGGCTGCCAGGTGGCAGGTTCGAGATGAGGGACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484590.1
CDS CAA 72 bp AAACCCACCTGGACAAGAGGACAAGCGATGCCAGCTTaGAGGCTGCTGGCAGTGGGTGCCTTCAGATCAAGA +
Preference number: 6 (lower is better)
Translates to: KPTWTRGQAMPA*RLLAVGAFRSR
Trigger: TCTTGATCTGAAGGCACCCACTGCCAGCAGCCTCAAAGCTGGCATCGCTTGTCCTCTTGTCCAGGTGGGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471687.1
CDS CAA 72 bp GCAGAGAGATCCACAGGTCCTCTCGGTTGGCCTTTGTaGGTCAGTGGGGTGGACTTGTCAGCCCTACAAAGA +
Preference number: 6 (lower is better)
Translates to: AERSTGPLGWPL*VSGVDLSALQR
Trigger: TCTTTGTAGGGCTGACAAGTCCACCCCACTGACCAACAAAGGCCAACCGAGAGGACCTGTGGATCTCTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484590.1
CDS CAA 72 bp GTTGCAGAGAGATCCACAGGTCCTCTCGGTTGGCCTTaGTTGGTCAGTGGGGTGGACTTGTCAGCCCTACAA +
Preference number: 6 (lower is better)
Translates to: VAERSTGPLGWP*LVSGVDLSALQ
Trigger: TTGTAGGGCTGACAAGTCCACCCCACTGACCAACAAAGGCCAACCGAGAGGACCTGTGGATCTCTCTGCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484590.1
CDS CAA 90 bp GCTTCCGTTGCAGAGAGATCCACAGGTCCTCTCGGTTGGCCTTTGTaGGTCAGTGGGGTGGACTTGTCAGCCCTACAAAGACAGGGAAAA +
Preference number: 6 (lower is better)
Translates to: ASVAERSTGPLGWPL*VSGVDLSALQRQGK
Trigger: TTTTCCCTGTCTTTGTAGGGCTGACAAGTCCACCCCACTGACCAACAAAGGCCAACCGAGAGGACCTGTGGATCTCTCTGCAACGGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484590.1
CDS TCA 72 bp AGCACACCCCAAAGCCACAAGGTAGAAACACATGAGTaGGGAAGTAGTTCTCAGGGCTGGCAGAGAGGGGTC +
Preference number: 6 (lower is better)
Translates to: STPQSHKVETHE*GSSSQGWQRGV
Trigger: GACCCCTCTCTGCCAGCCCTGAGAACTACTTCCTCACTCATGTGTTTCTACCTTGTGGCTTTGGGGTGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484590.1
CDS GCA 72 bp ACACTTTTCGGATCCCGTCACTCTTCTTGTAGAGGCTaGCGTTCCGCTCGGTCCCATGTTCCTTGTTTCCCT +
Preference number: 6 (lower is better)
Translates to: TLFGSRHSSCRG*RSARSHVPCFP
Trigger: AGGGAAACAAGGAACATGGGACCGAGCGGAACGGCAGCCTCTACAAGAAGAGTGACGGGATCCGAAAAGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281419.8
ENST00000315273.4
ENST00000641030.1
CDS GCA 72 bp TACAATGTGAAGAGAGGTTCGATCCACGGATCTGACTaGAAGGTGGAGGGCCGTTTCATCCGGCTCATGTCC +
Preference number: 6 (lower is better)
Translates to: YNVKRGSIHGSD*KVEGRFIRLMS
Trigger: GGACATGAGCCGGATGAAACGGCCCTCCACCTTGCAGTCAGATCCGTGGATCGAACCTCTCTTCACATTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS GCA 72 bp TTTGAACTTCATCTCCACAGAGGGCAACTGCCTCCCTaGAAGGGCACCTTGGTGGTCTACACAAACCCACCT +
Preference number: 6 (lower is better)
Translates to: FELHLHRGQLPP*KGTLVVYTNPP
Trigger: AGGTGGGTTTGTGTAGACCACCAAGGTGCCCTTGCAGGGAGGCAGTTGCCCTCTGTGGAGATGAAGTTCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471687.1
CDS CCA 72 bp ATCCACAGGTCCTCTCGGTTGGCCTTTGTTGGTCAGTaGGGTGGACTTGTCAGCCCTACAAAGACAGGGAAA +
Preference number: 6 (lower is better)
Translates to: IHRSSRLAFVGQ*GGLVSPTKTGK
Trigger: TTTCCCTGTCTTTGTAGGGCTGACAAGTCCACCCCACTGACCAACAAAGGCCAACCGAGAGGACCTGTGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484590.1
CDS CAA 90 bp GAAAGCCATGTAGGATCTGGCGCCCCACAGTCACAGCAGACGTCATaGCCCGTCATCCTCTGCACTTCTGAGATGATCTCCTTTGTCAGT +
Preference number: 6 (lower is better)
Translates to: ESHVGSGAPQSQQTS*PVILCTSEMISFVS
Trigger: ACTGACAAAGGAGATCATCTCAGAAGTGCAGAGGATGACGGGCAATGACGTCTGCTGTGACTGTGGGGCGCCAGATCCTACATGGCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281419.8
ENST00000315273.4
ENST00000641030.1
CDS CAA 90 bp GGTCTACACAAACCCACCTGGACAAGAGGACAAGCGATGCCAGCTTaGAGGCTGCTGGCAGTGGGTGCCTTCAGATCAAGATATTGCATG +
Preference number: 6 (lower is better)
Translates to: GLHKPTWTRGQAMPA*RLLAVGAFRSRYCM
Trigger: CATGCAATATCTTGATCTGAAGGCACCCACTGCCAGCAGCCTCAAAGCTGGCATCGCTTGTCCTCTTGTCCAGGTGGGTTTGTGTAGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471687.1
CDS CAA 90 bp AGACTTGACAGAGGAAGGCTTGACTGGGACAAGTTACAGAGGCCTTaGAACTTCATCTCCACAGAGGGCAACTGCCTCCCTGCAAGGGCA +
Preference number: 6 (lower is better)
Translates to: RLDRGRLDWDKLQRP*NFISTEGNCLPARA
Trigger: TGCCCTTGCAGGGAGGCAGTTGCCCTCTGTGGAGATGAAGTTCAAAGGCCTCTGTAACTTGTCCCAGTCAAGCCTTCCTCTGTCAAGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471687.1
CDS TCA 72 bp AGTCTACAATGTGAAGAGAGGTTCGATCCACGGATCTaGCTGCAAGGTGGAGGGCCGTTTCATCCGGCTCAT +
Preference number: 6 (lower is better)
Translates to: SLQCEERFDPRI*LQGGGPFHPAH
Trigger: ATGAGCCGGATGAAACGGCCCTCCACCTTGCAGTCAGATCCGTGGATCGAACCTCTCTTCACATTGTAGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS GCA 72 bp GTGAAGCTTCGCCGCGTTATCCGCGTGCTTCTTCCTTaGGTATCTCCTCTCGATGTACTTGGCTGTGATGTA +
Preference number: 6 (lower is better)
Translates to: VKLRRVIRVLLP*VSPLDVLGCDV
Trigger: TACATCACAGCCAAGTACATCGAGAGGAGATACGCAAGGAAGAAGCACGCGGATAACGCGGCGAAGCTTCAC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS CCA 72 bp ATGTTCCCAGTACATCTAAGGTCAGGGACTGCATCCTaGAATAATGAACCCCCAGCTCTCGGTGGATTCCGG +
Preference number: 6 (lower is better)
Translates to: MFPVHLRSGTAS*NNEPPALGGFR
Trigger: CCGGAATCCACCGAGAGCTGGGGGTTCATTATTCCAGGATGCAGTCCCTGACCTTAGATGTACTGGGAACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS CAA 72 bp GCGATAAAGTGCACAAATGACACCGGGAATGCGCCTTaGCGACCAGGATCTCCATCAATGTGGCCAATCCAC +
Preference number: 6 (lower is better)
Translates to: AIKCTNDTGNAP*RPGSPSMWPIH
Trigger: GTGGATTGGCCACATTGATGGAGATCCTGGTCGCAAAGGCGCATTCCCGGTGTCATTTGTGCACTTTATCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281419.8
ENST00000315273.4
ENST00000484590.1
CDS CAA 72 bp AGAGGAAGGCTTGACTGGGACAAGTTACAGAGGCCTTaGAACTTCATCTCCACAGAGGGCAACTGCCTCCCT +
Preference number: 6 (lower is better)
Translates to: RGRLDWDKLQRP*NFISTEGNCLP
Trigger: AGGGAGGCAGTTGCCCTCTGTGGAGATGAAGTTCAAAGGCCTCTGTAACTTGTCCCAGTCAAGCCTTCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471687.1
CDS CAA 90 bp ATTCAGTCAGCGATAAAGTGCACAAATGACACCGGGAATGCGCCTTaGCGACCAGGATCTCCATCAATGTGGCCAATCCACCACTCCTGG +
Preference number: 6 (lower is better)
Translates to: IQSAIKCTNDTGNAP*RPGSPSMWPIHHSW
Trigger: CCAGGAGTGGTGGATTGGCCACATTGATGGAGATCCTGGTCGCAAAGGCGCATTCCCGGTGTCATTTGTGCACTTTATCGCTGACTGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281419.8
ENST00000315273.4
ENST00000484590.1
CDS GCA 72 bp CCACAGTCACAGCAGACGTCATTGCCCGTCATCCTCTaGACTTCTGAGATGATCTCCTTTGTCAGTTCTTGG +
Preference number: 6 (lower is better)
Translates to: PQSQQTSLPVIL*TSEMISFVSSW
Trigger: CCAAGAACTGACAAAGGAGATCATCTCAGAAGTGCAGAGGATGACGGGCAATGACGTCTGCTGTGACTGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281419.8
ENST00000315273.4
ENST00000641030.1
CDS CAA 72 bp TCCTTTCTTGCATTCATGTCGCTGCCTGGGTTGGGTTaGACTGAGTCCTCAGCTGGTAGGCAACATTCCATG +
Preference number: 6 (lower is better)
Translates to: SFLAFMSLPGLG*TESSAGRQHSM
Trigger: CATGGAATGTTGCCTACCAGCTGAGGACTCAGTCAAACCCAACCCAGGCAGCGACATGAATGCAAGAAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS TCA 72 bp AAAATATCTCTCGTTTTGACGGCCTCGCAAAGACTGTaGAGCTTCGCCGCGTTATCCGCGTGCTTCTTCCTT +
Preference number: 6 (lower is better)
Translates to: KISLVLTASQRL*SFAALSACFFL
Trigger: AAGGAAGAAGCACGCGGATAACGCGGCGAAGCTTCACAGTCTTTGCGAGGCCGTCAAAACGAGAGATATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS GCA 72 bp ACTTCAGGAACGCACTTCCTAAATCTGGGTCATCTCTaGATACACAGTTGCCGCCAAACTTCTCCAGAGCCT +
Preference number: 6 (lower is better)
Translates to: TSGTHFLNLGHL*IHSCRQTSPEP
Trigger: AGGCTCTGGAGAAGTTTGGCGGCAACTGTGTATGCAGAGATGACCCAGATTTAGGAAGTGCGTTCCTGAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS CCA 72 bp AAGGTGGCCTTCAGACTTGACAGAGGAAGGCTTGACTaGGACAAGTTACAGAGGCCTTTGAACTTCATCTCC +
Preference number: 6 (lower is better)
Translates to: KVAFRLDRGRLD*DKLQRPLNFIS
Trigger: GGAGATGAAGTTCAAAGGCCTCTGTAACTTGTCCCAGTCAAGCCTTCCTCTGTCAAGTCTGAAGGCCACCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471687.1
CDS CCA 72 bp TCATCTCGAACCTGCCACCTGGCAGCCCTGGATAAATaGGTTCTGGAGAGTCAGCATTTTCATCTGCAAAAG +
Preference number: 6 (lower is better)
Translates to: SSRTCHLAALDK*VLESQHFHLQK
Trigger: CTTTTGCAGATGAAAATGCTGACTCTCCAGAACCCATTTATCCAGGGCTGCCAGGTGGCAGGTTCGAGATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484590.1
CDS CAA 90 bp TTCAGGAACGCACTTCCTAAATCTGGGTCATCTCTGCATACACAGTaGCCGCCAAACTTCTCCAGAGCCTGGGTGTACTGCTCTTCATTT +
Preference number: 6 (lower is better)
Translates to: FRNALPKSGSSLHTQ*PPNFSRAWVYCSSF
Trigger: AAATGAAGAGCAGTACACCCAGGCTCTGGAGAAGTTTGGCGGCAACTGTGTATGCAGAGATGACCCAGATTTAGGAAGTGCGTTCCTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS TCA 72 bp TCTTCCTTGCGTATCTCCTCTCGATGTACTTGGCTGTaGTGTAGTCCTTTCTTGCATTCATGTCGCTGCCTG +
Preference number: 6 (lower is better)
Translates to: SSLRISSRCTWL*CSPFLHSCRCL
Trigger: CAGGCAGCGACATGAATGCAAGAAAGGACTACATCACAGCCAAGTACATCGAGAGGAGATACGCAAGGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS TCA 72 bp CATAAGCTTGGAGCAATCCAAAAATATCTCTCGTTTTaGCGGCCTCGCAAAGACTGTGAAGCTTCGCCGCGT +
Preference number: 6 (lower is better)
Translates to: HKLGAIQKYLSF*RPRKDCEASPR
Trigger: ACGCGGCGAAGCTTCACAGTCTTTGCGAGGCCGTCAAAACGAGAGATATTTTTGGATTGCTCCAAGCTTATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS CAA 72 bp AAGCTCTTCACTAGTTTGCAAAGGTGGCCTTCAGACTaGACAGAGGAAGGCTTGACTGGGACAAGTTACAGA +
Preference number: 6 (lower is better)
Translates to: KLFTSLQRWPSD*TEEGLTGTSYR
Trigger: TCTGTAACTTGTCCCAGTCAAGCCTTCCTCTGTCAAGTCTGAAGGCCACCTTTGCAAACTAGTGAAGAGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471687.1
CDS GCA 72 bp CCTTGTTTCCCTGAGGCTGATGTAAGCTATAAGCTGTaGTCTGACGAATTTGGGAGTCCTCTTTCTGTTCAA +
Preference number: 6 (lower is better)
Translates to: PCFPEADVSYKL*SDEFGSPLSVQ
Trigger: TTGAACAGAAAGAGGACTCCCAAATTCGTCAGAGCACAGCTTATAGCTTACATCAGCCTCAGGGAAACAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281419.8
ENST00000315273.4
CDS TCA 72 bp AGACGTCATTGCCCGTCATCCTCTGCACTTCTGAGATaGTCTCCTTTGTCAGTTCTTGGACGATGTTATTTT +
Preference number: 6 (lower is better)
Translates to: RRHCPSSSALLR*SPLSVLGRCYF
Trigger: AAAATAACATCGTCCAAGAACTGACAAAGGAGATCATCTCAGAAGTGCAGAGGATGACGGGCAATGACGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281419.8
ENST00000315273.4
ENST00000641030.1
CDS GCA 72 bp GGAGTCTCTCCTAGACTCTTTCTGTTCAACCTGCAATaGGGATTTCAAAATATCTCGAAGCTGTATCAACTG +
Preference number: 6 (lower is better)
Translates to: GVSPRLFLFNLQ*GFQNISKLYQL
Trigger: CAGTTGATACAGCTTCGAGATATTTTGAAATCCGCATTGCAGGTTGAACAGAAAGAGTCTAGGAGAGACTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641030.1
CDS GCA 72 bp ATTTGGGAGTCTCTCCTAGACTCTTTCTGTTCAACCTaGAATGCGGATTTCAAAATATCTCGAAGCTGTATC +
Preference number: 6 (lower is better)
Translates to: IWESLLDSFCST*NADFKISRSCI
Trigger: GATACAGCTTCGAGATATTTTGAAATCCGCATTGCAGGTTGAACAGAAAGAGTCTAGGAGAGACTCCCAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641030.1
CDS CAA 90 bp ATGATCTCCTTTGTCAGTTCTTGGACGATGTTATTTTCTCCAGTATaGTCATCCCCCTTAAATGCATTGTTTAAAGCTTCTTCTTTGCTA +
Preference number: 6 (lower is better)
Translates to: MISFVSSWTMLFSPV*SSPLNALFKASSLL
Trigger: TAGCAAAGAAGAAGCTTTAAACAATGCATTTAAGGGGGATGACAATACTGGAGAAAATAACATCGTCCAAGAACTGACAAAGGAGATCAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281419.8
ENST00000315273.4
ENST00000471687.1
ENST00000641030.1
CDS CAA 72 bp TTTGTCAGTTCTTGGACGATGTTATTTTCTCCAGTATaGTCATCCCCCTTAAATGCATTGTTTAAAGCTTCT +
Preference number: 6 (lower is better)
Translates to: FVSSWTMLFSPV*SSPLNALFKAS
Trigger: AGAAGCTTTAAACAATGCATTTAAGGGGGATGACAATACTGGAGAAAATAACATCGTCCAAGAACTGACAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281419.8
ENST00000315273.4
ENST00000471687.1
ENST00000641030.1